TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.510553 %AT, 2304201 nt, 16851 terms. Intergenic: 0.54992 %AT, H2T: 453385 nt, 3587 terms; T2T: 209815 nt, 3544 terms; H2H: 210929 nt, 3253 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|110666976|ref|NC_008212.1| Haloquadratum walsbyi DSM 16790, complete genome (length 3132494) TERM 1 2342 - 2354 + G 70 -7.7 -3.80174 | opp_overlap 2342 2344 AGTTCCGATTGAAGA GACTG AAA CAGTC TTGTTATCAGACTCT cdc6_1 723 - 2426 + | cell division control protein cdc6-like protein sec11 3318 - 2461 - | signal sequence peptidase polA1 3557 - 5179 + | DNA polymerase II small subunit HQ1004A 5836 - 5330 - | hypothetical protein lysC 6224 - 7402 + | aspartate kinase TERM 2 7773 - 7754 - T 70 -9.2 -3.34806 | opp_overlap 7755, overlap 7743 7752 ATATCAAGGAGAATA CTTGCGGC TTCA GCCGCAGG ATGAACCCGACAATT TERM 3 8613 - 8599 - T 75 -11.4 -3.05384 | CCGTTCCTCATGGAA GCCGTC TCT GACGGC TGAGAGAGTGGGGTA purH 9218 - 8631 - | IMP cyclohydrolase HQ1007A 10115 - 9618 - | hypothetical protein mer3 12565 - 10112 - | ski2-like helicase TERM 4 12007 - 12056 + g 79 -9.5 -3.90291 | gap 1, opp_overlap 12006 12004 12009, overlap 12010 GCCACTCAGCAATAG CATCTGCATTTCCAATCGTTGC AGAGAGC GCAACGACTTGAAGTGCAG-TG TTTCGTTGACGAAGT TERM 5 12010 - 12054 + g 86 -12.3 -3.54146 | opp_overlap 12009 12006 12004, overlap 12007 ACTCAGCAATAGCAT CTGCATTTCCAATCGTTGC AGAGAGC GCAACGACTTGAAGTGCAG TGTTTCGTTGACGAA TERM 6 12301 - 12313 + g 71 -4.1 -4.82901 | ACTCTTCCCAACGTT CGAAC TCA GTTTG TTTTTCTGAGGCGAG HQ1009A 12949 - 12683 - | hypothetical protein HQ1010A 13384 - 13581 + | hypothetical protein TERM 7 13759 - 13787 + G 81 -13.1 -2.77235 | opp_overlap 13758 13759, overlap 13766 CTTCGGACCAGTAAT GGTCGGATGACCG CTG CGGTCGTTCGTCC TGATTCGATGATTGA TERM 8 14971 - 14957 - g 78 -7.8 -4.36411 | CAGCAATTACCAAAA CGACAC CAA GTGCCG CTGAAACGACCGGTT aaa3 13585 - 15894 + | AAA-type ATPase (transitional ATPase homolog) TERM 9 16380 - 16352 - g 81 -12.5 -3.06183 | opp_overlap 16373, overlap 16372 16373 TGCATTCGCAGTCAA GTCAGCGAGTCCT TCA AGAACTCGCTGAA GCGTTCAACGGTTGG HQ1012A 16126 - 17406 + | IS1341-type transposase HQ1013A 17724 - 17473 - | hypothetical protein bopI 18796 - 18032 - | bacteriorhodopsin precursor (Squarebop I) HQ1015A 19008 - 19364 + | hypothetical protein ferC 19917 - 20159 + | ferredoxin III TERM 10 20198 - 20182 - T 77 -10.9 -3.21622 | opp_overlap 20184 ACATATAGGGATCAA CATGGCT TTG AGCCATG TATCAAAATAAACTG bopII 21132 - 20392 - | bacteriorhodopsin precursor (Squarebop II) crtY 21920 - 22678 + | lycopene cyclase brp 22669 - 23706 + | brp-like protein TERM 11 25509 - 25492 - g 90 -12.7 -3.66999 | ATTCATCGACCGAAA CCGACGC TAAA GCGTCGG ATGAGGACACAGATG TERM 12 25602 - 25588 - g 91 -4.2 -5.65927 | overlap 25590 TATCCAAACAAAAAA TAGCAG ATT CTGCGA AGGACAGTCAATCAG TERM 13 25600 - 25590 - g 74 -6.8 -4.45696 | overlap 25588 TCCAAACAAAAAATA GCAG ATT CTGC GAAGGACAGTCAATC HQ1020A 23883 - 26438 + | Hef nuclease HQ1021A 26523 - 27560 + | prepilin signal peptidase TERM 14 28361 - 28323 - f 75 -11.1 -3.01712 | gap 2, opp_overlap 28327 28331 TGTGCTTGCCCAAGA CGGTGAAG--CCTCGGGGC TTG ACCCCGAGGTACTTCACTG TCCGCCGCTCACTTT TERM 15 28331 - 28351 + F 84 -14 -2.77182 | opp_overlap 28323, overlap 28327 CCCAAGACGGTGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACTGTCCGC hisI 28538 - 28936 + | phosphoribosyl-AMP cyclohydrolase TERM 16 29648 - 29663 + G 71 -10.4 -2.87051 | overlap 29647 CGTTTCAATCCCCGC CGCCTG ATCT CAGGCG ATTTGCTCGTGAGAG TERM 17 29944 - 29921 - g 82 -5.2 -5.08824 | opp_overlap 29908 29940, overlap 29924 29925 TCGCGAGTGAAAAAA CAATCGCTCG TCTC CGAGCGCTTC GAGATCAAAGCTATG TERM 18 29941 - 29924 - g 77 -6.9 -4.64763 | opp_overlap 29908 29940, overlap 29921 29925 CGAGTGAAAAAACAA TCGCTCG TCTC CGAGCGC TTCGAGATCAAAGCT TERM 19 29940 - 29925 - g 75 -10.4 -3.37773 | opp_overlap 29908, overlap 29924 29921 GAGTGAAAAAACAAT CGCTCG TCTC CGAGCG CTTCGAGATCAAAGC HQ1023A 28951 - 30129 + | hypothetical protein pmm 31634 - 30255 - | phosphohexomutase (phosphoglucomutase; phosphomannomutase) hisA 31872 - 32609 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisB 33047 - 33673 + | imidazoleglycerol-phosphate dehydratase TERM 20 34024 - 34008 - g 85 -11.5 -3.72765 | AATCGAAATTCCAAA CACGGGC ATT GCCCGCG AAATTGACGTTGATC HQ1027A 33877 - 34380 + | hypothetical protein TERM 21 34784 - 34756 - g 74 -11.1 -3.06183 | overlap 34764 34776 TGCATTCTCAGTCAA GTCAGCAAGTTCT TCA AGAACTCGCTGAG GCGTTCACCGGTCGG HQ1027C 34530 - 34889 + | IS1341-type transposase (nonfunctional,N-terminal part) HQ1028A 34897 - 35577 + | hypothetical protein upp 36720 - 36040 - | uracil phosphoribosyltransferase HQ1030A 37041 - 36859 - | hypothetical protein TERM 22 37467 - 37482 + G 74 -6.8 -4.40561 | ATTCGATTCCATCGC CTCTGC CTTG GCGGAG TTATTTTTGGGACGA HQ1031A 37194 - 37541 + | hypothetical protein HQ1032A 37712 - 37930 + | hypothetical protein cobW 39295 - 37976 - | cobalamin synthesis protein/P47K HQ1034A 39445 - 39741 + | hypothetical protein TERM 23 40533 - 40543 + G 73 -4.6 -4.73613 | CCTAATGAGAATGGT CGTG GAG CGCG TTTTCTTCGTGATCG arsA 39750 - 40733 + | transport ATPase ( substrate arsenite) cstA 40822 - 42627 + | carbon starvation protein A HQ1037A 43628 - 42966 - | hypothetical protein HQ1038A 44216 - 43833 - | hypothetical protein TERM 24 44256 - 44245 - H 90 -7.2 -5.32882 | TATCAGCATAAAAAA CCGC ACGG GCGG TCAGGAACCCGTCAC HQ1039A 44335 - 44559 + | hypothetical protein HQ1040A 44645 - 45334 + | hypothetical protein HQ1041A 45461 - 45844 + | transcription regulator TERM 25 47142 - 47129 - g 81 -8.1 -4.49556 | GCTGGATTAAAGAAA CTCCG TGGT CGGAG TCGAATCGACAGTGA thrC 46022 - 47287 + | threonine synthase serA 49206 - 47602 - | D-3-phosphoglycerate dehydrogenase serB 49394 - 50029 + | phosphoserine phosphatase topA 51362 - 50610 - | DNA topoisomerase I mer3 53816 - 51462 - | ATP-dependent DNA helicase TERM 26 54462 - 54424 - H 88 -12.5 -3.62591 | gap 1, opp_overlap 54419 54454, overlap 54425 GGCATAACTTCTAAA CTGCCTCGGGG-TCAGAT CAAC ATCAGAGCCCCGAGGCAT TCGCCTTGCTCATCT TERM 27 54461 - 54425 - H 93 -16 -2.77233 | gap 1, opp_overlap 54419 54454, overlap 54424 GCATAACTTCTAAAC TGCCTCGGGG-TCAGAT CAAC ATCAGAGCCCCGAGGCA TTCGCCTTGCTCATC TERM 28 54980 - 54993 + G 71 -4.5 -4.61199 | CGGTGTATAAAGATC TCCGT GACC GCGGA TTTTATCTCTCACCT endA 54631 - 55851 + | tRNA splicing endonuclease trpS 55848 - 57692 + | tryptophanyl-tRNA synthetase pheS 57894 - 59456 + | phenylalanyl-tRNA synthetase subunit alpha pheT 59456 - 61345 + | phenylalanyl-tRNA synthetase subunit beta valS 61567 - 64359 + | valyl-tRNA synthetase pyrD 65595 - 64522 - | dihydroorotate dehydrogenase 2 HQ1053A 65882 - 65685 - | hypothetical protein HQ1054A 66794 - 66468 - | nonhistone chromosomal protein TERM 29 67052 - 67070 + r 73 -11 -2.61216 | opp_overlap 67052, overlap 67049 67050 GTAATACGCGGAAGA GCATCAGG TCG CCTGGTGC TAACTTGATTGATAA TERM 30 67922 - 67942 + r 84 -10.4 -3.83998 | opp_overlap 67910 AAGGGGACTCCGAGT GCGAGGGC ATATC GTCCTCGC TTTCGTGTACCGTAG TERM 31 68104 - 68086 - R 73 -11 -2.71791 | overlap 68085 68101 AGTCCGTCGGGAAAT CCACTCGC CCA ACGAGTGG GCGTCCGACGGAAAC TERM 32 71144 - 71126 - R 74 -10.2 -3.1829 | overlap 71124 ACAGTAGCAGCAATA GTCGGGTG TGA CCCCCGAC GGCCTAACGAGCAAG TERM 33 71309 - 71294 - R 79 -11.8 -3.24021 | overlap 71289 71287 TTCGGAAACAGTGAA CGGGGC CATC GCCCCG TCGAATCATGGAATC TERM 34 72009 - 71999 - R 72 -8.2 -3.73042 | overlap 71997 TCCGGGAGGAAAACA CCGG TAG CCGG GCAGTTTGACTGGGG TERM 35 72286 - 72323 + r 79 -10 -3.68302 | overlap 72317 CCTCGATGTCGGTTC CCTCCATCCT-GCCTGTG CAGA CGCAGGCAAGGGTG-AGG TTGTTCGCCTATTAA HQ1055A 73986 - 73639 - | hypothetical protein TERM 36 74990 - 74970 - H 70 -8.9 -3.43925 | opp_overlap 74970 74967, overlap 74968 74966 GTAGTAATAAAGATA CCGGCTGGG TGG CACAGCCAG TGATTCAGTTGTTCG HQ1057A 75661 - 76263 + | hypothetical protein TERM 37 76459 - 76469 + T 76 -8.2 -4.07568 | CTCGTTGGCTTCCTC CCCC AAT GGGG TTTTGACCCGGAACG pncB 78450 - 77290 - | nicotinate phosphoribosyltransferase HQ1059A 80267 - 78675 - | hypothetical protein entB 80336 - 80917 + | isochorismatase; nicotinamidase; N-carbamoylsarcosine amidase TERM 38 81603 - 81617 + G 75 -3.4 -5.06816 | overlap 81603 81604 TTGAATGCCCATTAT TCGCGC TTG GCGAGG TTTTTCTTGCCGACT pyrC 81197 - 82501 + | dihydroorotase HQ1062A 83526 - 82720 - | hypothetical protein usp 83767 - 84132 + | homolog to stress response protein HQ1064A 84129 - 84677 + | protein N-acetyltransferase-like protein usp 85226 - 84768 - | homolog to stress response protein TERM 39 85638 - 85625 - g 70 -2.3 -4.91459 | overlap 85626 GAACATGGAGAAAAA GCGGT CAAT ACCGT GGCAGGACGAGCCAA usp 85427 - 85897 + | stress response protein TERM 40 86131 - 86098 - f 70 -9.1 -3.39288 | gap 1, opp_overlap 86108 86129, overlap 86096 86099 TATCGCTCAACAATA CTGACA-TCAAGACAG TTA CTGTCTTGAGTATCAA TCACATAGTGTAGTT TERM 41 86130 - 86099 - f 71 -10.4 -2.63252 | gap 1, opp_overlap 86108 86129, overlap 86098 86096 ATCGCTCAACAATAC TGACA-TCAAGACAG TTA CTGTCTTGAGTATCA ATCACATAGTGTAGT TERM 42 86218 - 86230 + G 89 -3.3 -5.61596 | overlap 86219 GCGGAAATCTCGACT CCCAG GGG CTGGA TTTTTTTATCCGGAT HQ1067A 86162 - 87481 + | hypothetical protein TERM 43 87585 - 87530 - T 76 -8.2 -4.10161 | overlap 87542 87556 TATCACTGTCTAAAA TATATATATATACATATACACATATA CATA TATACATATATACATATATACATATA CGATCATCTGATACA HQ1068A 88134 - 87646 - | hypothetical protein TERM 44 88507 - 88532 + G 79 -9.7 -3.92178 | TGTCCTCAGTATCGA TCTTCCCGGGT ATGA ACCCGAGGAGA TTTCATTGCGATGGT hsp20 88364 - 88747 + | hsp20-type chaperone rps6R 89157 - 89642 + | 30S ribosomal protein S6e TERM 45 89993 - 90009 + G 75 -10.1 -3.36762 | overlap 89991 TTCTGCTATGGCTTG CGGTCGC CGG GTGACCG TGTTGTGTACTCTGT HQ1071A 89648 - 90091 + | hypothetical protein HQ1072A 91328 - 90663 - | hypothetical protein TERM 46 93345 - 93365 + G 85 -6.1 -5.15117 | GTGTTGTCACCGATG CTGACGGAA CTG TTCAGTCGG TTTTTTCAAGTTTTG HQ1073A 91700 - 94117 + | signal-transducing histidine kinase/response regulator pepB 95420 - 94302 - | aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) TERM 47 95555 - 95577 + H 70 -9.8 -2.98491 | overlap 95557 TCAGTGCTGGATTCT GACCCCTGAG GAA CTCGGGGCTC TATATCGTATCAGTT gnd 95702 - 96622 + | 6-phosphogluconate dehydrogenase-like protein fer 96661 - 97251 + | ferredoxin (2Fe-2S) HQ1077A 98129 - 98521 + | hypothetical protein HQ1078A 98514 - 98798 + | hypothetical protein TERM 48 99272 - 99282 + T 80 -6.8 -4.57073 | opp_overlap 99269 99266 99272 99279, overlap 99269 GAGGGACAAGAAGCA CGCA AAG TGCG TTTTTCGCAAAAGTA TERM 49 99482 - 99470 - T 84 -7.7 -4.74103 | GTGTCAACCCAAAAA TACCG ACG CGGTA AAGCGATTACAAGAA HQ1079A 100550 - 100119 - | prophage maintenance system killer protein TERM 50 101078 - 101108 + r 72 -8.4 -3.71873 | CTATAGCGTATATCC TGAGGTTAGTTCAT ATG ATGAACTTGCTTCA TTTAGATATCCCTCA TERM 51 101335 - 101356 + r 93 -15.9 -3.0693 | overlap 101347 GAAACAGCGAGAGTT CCACGGGTC ACCC GACCCGTGG TCGTTTACTTTGGGA TERM 52 101347 - 101359 + r 79 -9.1 -4.06903 | overlap 101335 GTTCCACGGGTCACC CGACC CGT GGTCG TTTACTTTGGGACTT TERM 53 101403 - 101427 + r 79 -11.3 -3.40403 | overlap 101404 ATTTTTCAGGTGAAT CGCCTCGGGGT TAA GCCCCGGGGCA TTCTCCTAGACCGCC TERM 54 101404 - 101426 + r 86 -14.8 -2.64099 | overlap 101403 TTTTTCAGGTGAATC GCCTCGGGGT TAA GCCCCGGGGC ATTCTCCTAGACCGC TERM 55 101664 - 101702 + r 74 -6.8 -4.19817 | gap 1 TAAAAGAAGTAAATG TTGAGG-CTGAGACTGC ACTGAA GCGTTCTCGGTCCTCAA TTTTGGATCACTGAG TERM 56 102079 - 102068 - R 73 -2.2 -5.2291 | ATATCATAATAAAAA TAGG AAGC CCCA GTTCACGGAAGCGGC TERM 57 102103 - 102090 - R 70 -9.5 -3.06796 | CCCCAGTTCACGGAA GCGGC GTCA GCCGC TAAGTATGTAAGTGT kch 103021 - 102218 - | Kef-type K+ transporter NAD-binding component hmu 130512 - 103033 - | halomucin TERM 58 104579 - 104592 + g 74 -9.5 -3.57615 | overlap 104588 CCAGCACCAGTGGTC GCCGC GACT GCGGC TTTGCCAGCTGTTGA TERM 59 108275 - 108317 + g 73 -5.6 -4.60648 | gap 1 TCTGGGTTTCGAATG TCGGGTTCGACGT-ACGCC TCTGCC GGCGTTACGTTGATACTGA TTTCTTTGGTGTTTT TERM 60 108507 - 108532 + g 73 -10.4 -3.19192 | opp_overlap 108504, overlap 108504 108527 GATACCACTCAACCG CGCCGCGGTT ATGATC GACCGTGGCG TTCACTTCGATCCCA TERM 61 108718 - 108742 + g 73 -8.5 -3.92746 | overlap 108716 108719 GCTATTAGCTTGTTT TGGCACAGGGA TTG TCACTGTGCCC TGTTTTTGAGCTGGA TERM 62 108719 - 108741 + g 81 -12 -2.95166 | overlap 108718 108716 CTATTAGCTTGTTTT GGCACAGGGA TTG TCACTGTGCC CTGTTTTTGAGCTGG TERM 63 111192 - 111215 + g 74 -6.8 -4.47328 | gap 1 CAGTTGACACGTCGC CTGTT-GCGGT GAC ATCGCTAACAG TTTTGTCATCGGGTT TERM 64 116063 - 116092 + g 78 -10.7 -3.28712 | ACGCGGCCCCCATTC CGTCCGTGAACTC CGAT GAGTCCACCGACG TTGTCGCCCGACCCG TERM 65 119376 - 119404 + g 80 -12.4 -2.82623 | overlap 119370 119374 AGGCGTCGCTCGTCG CCGACGCGTCGA TATCT TCGGCGAGTCGG TAGTTATCAGCACGC TERM 66 122810 - 122825 + g 71 -9 -3.53811 | TCAGTGGAGACGTCG CCTCGT GCAT ACGAGG TTTCGACACCATCGC TERM 67 128728 - 128770 + g 73 -7.9 -3.97307 | gap 1, overlap 128736 CGCAGTCCCGTCAAG CGTCA-GCACACCAGTTGCA CTGT TGTAATTGGTGTTCGTGATG TTGTTGTTCGATGCG capB 132447 - 131281 - | capsular biosynthesis protein CapB / polyglutamate synthase capC 133661 - 132450 - | capsule polysaccharide biosynthesis protein, integral membrane protein TERM 68 133979 - 133965 - H 75 -6.4 -4.4078 | TTTCCTCAATCAAAA TCACGG CAT CCATGA AATGAGTTCGATATC TERM 69 134910 - 134932 + G 88 -14.2 -2.62735 | opp_overlap 134900 134901 ATATACCCTGCTGGA GGGGCTGGAT TCA ATCTAGCCCC TCATCTCGCCGGTCT bat 134289 - 136838 + | bacterioopsin activator lpdA 138296 - 136890 - | dihydrolipoamide dehydrogenase TERM 70 137092 - 137112 + g 79 -2.4 -5.38497 | opp_overlap 137092 ACATCAACAACTAAC CGAGCAAG CCCAT CTGGCACG TTTTTTGATTTAAAT TERM 71 138496 - 138482 - R 70 -10 -3.05596 | opp_overlap 138481 TACCCCCCTACTCAA CAACGC TTT GCGTTG CTTCCGTGAGGGCGA HQ1086A 139069 - 138596 - | hypothetical protein TERM 72 138881 - 138851 - G 72 -6.2 -4.32857 | gap 1 TCCGGCAAATATAAA TGCTACTGCTGAC CCAATC GTCTGCAGT-GCA TACCAGGACCCCCTG HQ1087A 139524 - 139066 - | hypothetical protein TERM 73 140237 - 140225 - g 77 -6.3 -4.55023 | GCGAATATGACAAAA CAAGA ATA TCTTG CGGAAAACCCCGACC HQ1088A 139694 - 140296 + | hypothetical protein TERM 74 140786 - 140766 - T 72 -10.4 -2.81951 | overlap 140765 GTATCAATACACAAC TGAGGCGG TCTAC CCGCCCCA CTAATCGGATAATAT TERM 75 140925 - 140900 - T 71 -9.7 -3.24747 | gap 1 CCGGGATAGGAGTAA CGGCTGGCTGGC ACA GCCAGG-AGCCG TCATCGAGACGGCTA HQ1090A 142003 - 141023 - | hypothetical protein nadE 143040 - 142213 - | NAD(+) synthase (glutamine-hydrolyzing) HQ1092A 143916 - 143716 - | hypothetical protein HQ1093A 144274 - 145371 + | aldo/keto reductase family oxidoreductase HQ1094A 147022 - 145427 - | hypothetical protein HQ1095A 149016 - 147190 - | metalloprotease/metallo peptidase HQ1096A 149259 - 149810 + | hypothetical protein lysS 152042 - 150375 - | lysine--tRNA ligase TERM 76 151388 - 151402 + g 71 -5 -4.61527 | CAAGATCAATATCGG TGACAG TTT CTGTTA TTTTTCCACAGTTTT pyrH 152774 - 152049 - | uridylate kinase TERM 77 153612 - 153643 + G 86 -13.8 -3.01924 | opp_overlap 153615 153618 153625, overlap 153615 TCGAACAGGTATTAT CAACGACGGAGAAG ACAT CGTCTTCGTCGTTG TCTTAGCCGGGCATC TERM 78 153615 - 153640 + G 76 -9.7 -3.65812 | opp_overlap 153615 153618 153625, overlap 153612 AACAGGTATTATCAA CGACGGAGAAG ACAT CGTCTTCGTCG TTGTCTTAGCCGGGC moaE 152956 - 153774 + | molybdopterin converting factor, large subunit TERM 79 154016 - 154004 - f 76 -4.1 -5.05301 | AAACAATTATAAAAA GTAAG CAA CTCAC AGAGTAAATGATAAA HQ1100A 154132 - 154398 + | hypothetical protein HQ1101A 154723 - 155862 + | membrane associated metalloprotease thiL 157106 - 156210 - | thiamin-phosphate kinase TERM 80 157054 - 157068 + g 75 -11.4 -2.74755 | overlap 157053 157050 ACTGCTGCATCGTCG CCTGCC TGT GGCAGG GTCTTTGCTATTTGC TERM 81 158381 - 158393 + G 74 -4.1 -4.88228 | TGCCGGTGGGATTGA GACAG TGC TTGTC TTTTTGCTATTAGCT HQ1103A 157506 - 158552 + | hypothetical protein rps19R 158750 - 159205 + | 30S ribosomal protein S19e HQ1105A 159294 - 159656 + | hypothetical protein HQ1106A 159664 - 160269 + | hypothetical protein hisS 160411 - 161715 + | histidyl-tRNA synthetase truA 161787 - 162617 + | tRNA pseudouridine synthase A HQ1109A 162855 - 163013 + | hypothetical protein pepF 163455 - 165254 + | oligoendopeptidase HQ1111A 165437 - 165637 + | hypothetical protein TERM 82 165827 - 165850 + T 72 -3.1 -5.00616 | opp_overlap 165828, overlap 165828 CAAAAATATAAGATA TCGCTCATC TGTAAC GATGAGTGC TTTTTTAGGACGGAA HQ1112A 167106 - 166117 - | hypothetical protein HQ1113A 167345 - 167121 - | hypothetical protein HQ1115A 167788 - 168120 + | hypothetical protein nirA 168189 - 169937 + | ferredoxin--nitrite reductase HQ1117A 169943 - 170242 + | hypothetical protein lrp 170542 - 171168 + | transcription regulator TERM 83 172822 - 172802 - g 70 -9.7 -3.22223 | CAACCCCAGCAGCAA CGATGGTCG GAA CGACAATCG GTGCAAAAAATGGTA copA 171256 - 174084 + | transport ATPase 1 ( substrates copper/metal cation) HQ1120A 175651 - 174224 - | ferredoxin-NAD+ reductase TERM 84 175767 - 175751 - R 74 -3.7 -5.06816 | ATTTTTTAAGAAAAA GACTG CCAATCT CAGTC GCTATGAGAGATTAT TERM 85 175820 - 175801 - R 77 -10.7 -3.32946 | overlap 175799 GGGTCAAGGAGAATA CCTGCGG GTTCAG CCGCAGG ATAAATCCGACACCC epf 177845 - 176613 - | mRNA cleavage and polyadenylation specificity factor-like protein TERM 86 176697 - 176685 - G 70 -7.7 -3.80461 | overlap 176677 CAATTCATCAGCAAA TCGCT GAC AGCGA TCACCATGATTAATG HQ1122A 177895 - 178800 + | hypothetical protein TERM 87 179109 - 179144 + F 74 -10.4 -3.18274 | gap 1 GAGTTCGGGTGTTAA TTCCAGCCGACCC-CTC ACG GGGAGGGTCGGAGGGAA TTAAATTCGCCTGCG TERM 88 179181 - 179218 + F 82 -7.9 -4.72029 | gap 3, opp_overlap 179180 179181, overlap 179182 179188 GTGCAGACCCCAAAC G-GTGAAG--CCTCGGGG CTTGA CCCCGAGGTACTTCACTC TTTTATTCACTTAGA TERM 89 179182 - 179216 + F 95 -11.6 -3.9716 | gap 2, opp_overlap 179181 179180, overlap 179181 179188 TGCAGACCCCAAACG GTGAAG--CCTCGGGG CTTGA CCCCGAGGTACTTCAC TCTTTTATTCACTTA TERM 90 179188 - 179208 + F 84 -14 -2.81509 | opp_overlap 179181 179180, overlap 179182 179181 CCCCAAACGGTGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACTCTTTTA glo 179827 - 180447 + | lyase/ dioxygenase ( lactoylglutathione lyase, aromatic compounds dioxygenase) adh 181516 - 180479 - | alcohol dehydrogenase TERM 91 181928 - 181939 + G 73 -7.2 -4.25458 | opp_overlap 181925 ATCCCAAAAAGTGGC GGCG GGTA CGCC TTTGTTCGTGAGATT cat2 181706 - 183331 + | cationic amino acid transport protein trkA 183334 - 183987 + | K+ transport systems, NAD-binding protein TERM 92 184698 - 184718 + T 84 -14 -2.78712 | opp_overlap 184691 184690, overlap 184694 CCCCAAACGGTGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACTTGCGCG oxlT 186199 - 184916 - | major facilitator family oxalate/formate antiporter TERM 93 185602 - 185618 + g 80 -12.3 -2.91869 | overlap 185596 185599 185612 CGTCTTCGGTCATAC CGGATGG CAG CCATCCG TCTGGTGGTTTCTTG hoxF 186373 - 187881 + | NAD-reducing hydrogenase, alpha subunit fdhAI 187881 - 188924 + | NADH:ubiquinone oxidoreductase / formate dehydrogenase alpha subunit I fdhAII 188921 - 191239 + | NADH:ubiquinone oxidoreductase / formate dehydrogenase alpha subunit II HQ1131A 191242 - 192030 + | hypothetical protein fdhA 192141 - 194228 + | NADH:ubiquinone oxidoreductase / formate dehydrogenase, alpha subunit HQ1133A 195040 - 194741 - | hypothetical protein TERM 94 195066 - 195088 + H 82 -7.1 -4.79756 | gap 1, opp_overlap 195070, overlap 195070 GTCGCCGGTTTATAT CAA-ACGCTG TCGA CAGCGTATTG TTTTTCGATTGTATA TERM 95 195070 - 195083 + H 72 -8.1 -3.83257 | opp_overlap 195070, overlap 195066 CCGGTTTATATCAAA CGCTG TCGA CAGCG TATTGTTTTTCGATT TERM 96 195083 - 195070 - H 72 -8.1 -3.83026 | opp_overlap 195066 195070 CCGGTTTATATCAAA CGCTG TCGA CAGCG TATTGTTTTTCGATT TERM 97 195297 - 195270 - g 79 -10.6 -3.74762 | overlap 195278 AACAGCGATTAATAA TGCAGAAACCCA CAAT TGGGTCTCAGCA GCAACAGCCGCGAGT HQ1134A 195112 - 195744 + | hypothetical protein HQ1135A 196669 - 195878 - | sugar epimerase/dehydratase-like protein HQ1136A 196806 - 197180 + | hypothetical protein HQ1137A 197272 - 197679 + | hypothetical protein HQ1138A 199849 - 197897 - | ABC-type multidrug/lipid transport system,permease and ATP-binding protein HQ1139A 200327 - 199926 - | hypothetical protein HQ1140A 201131 - 200634 - | hypothetical protein TERM 98 201251 - 201240 - R 72 -5.8 -4.43272 | ATGCAAAATTGAAAA CGGT TATA ACCG CGAGTGGGTTGACTA HQ1141A 201765 - 201481 - | hypothetical protein HQ1142A 202075 - 202563 + | hypothetical protein TERM 99 202745 - 202726 - T 77 -11.4 -3.18264 | gap 1 GTTCCGATGGAGGAA CGCCC-GCC TCT GGCTGGGCG GTGTGACGATCAACC TERM 100 202782 - 202798 + T 76 -7.9 -4.35518 | opp_overlap 202777 202772 AACTATGACACGCTG CGTCTCG CCA CGAGTCG TTTTGCTGTCGGGTT TERM 101 203090 - 203102 + T 76 -9.1 -3.72893 | ATTCAGGAGCACTAC CGACC CGT GGTCG TTTACTGAGAAGCTG nosY 204008 - 203154 - | ABC-type copper transport system involved in multi-copper enzyme maturation, permease protein nosY 204820 - 204005 - | ABC-type copper transport system involved in multi-copper enzyme maturation, permease protein nosF 205902 - 204817 - | ABC-type copper transport system involved in multi-copper enzyme maturation, ATP-binding protein TERM 102 205407 - 205427 + g 79 -11.9 -3.09834 | GGAGTTCTGCAGCAC CTGTTGGGT CTA ACCCAGCAG TTGGCTCGTCAAGTA TERM 103 206351 - 206368 + G 74 -9.1 -3.71848 | gap 1 ATCGGTTTGTTGATG GCGC-CGG CAC CCGTGCGC TTGTTAATGCAGCCA HQ1146A 206050 - 206817 + | 3-beta hydroxysteroid dehydrogenase/isomerase family protein pch 207908 - 207096 - | voltage-gated potassium channel (MVP) HQ1148A 208378 - 207905 - | hypothetical protein HQ1149A 209070 - 208570 - | hypothetical protein HQ1150A 209443 - 209132 - | hypothetical protein TERM 104 209829 - 209810 - g 77 -2.8 -5.25735 | gap 1, overlap 209813 TTAAAAAATCAAAAA GCA-GCTCG AAT CCAGCGTGC GTTGACGGCGATTCG nthA 209561 - 210232 + | endonuclease III; DNA-(apurinic or apyrimidinic site) lyase HQ1152A 211257 - 210511 - | iron(III ABC transporter periplasmic substrate-binding protein ABC transporter periplasmic substrate-binding protein TERM 105 211287 - 211311 + H 70 -2.1 -4.91712 | overlap 211289 ATCGTCGTACATGAC TTGTATGGAAT CGT ATTCCGAACTA TTTTTATCAGTTGAC TERM 106 211863 - 211853 - g 81 -3.2 -5.48213 | GATGCAAAAGAAAAA GACC AGA AGTC CCGTGTTGGCGCCCC tfbA 211508 - 212608 + | transcription initiation factor TFB TERM 107 213362 - 213339 - g 79 -2.4 -5.52909 | gap 1, opp_overlap 213359, overlap 213341 CAACACGGAAAAAAA GTTGCTCGCGA TAT TCGC-AACAGC GGAGCAGTTATAATT aroD 212994 - 213731 + | 3-dehydroquinate dehydratase TERM 108 213740 - 213718 - T 72 -10.7 -2.90573 | overlap 213717 TCACTCATACGAAAG TTGAGGATG ATTAG CATCCTCAA TGACAACTACTTTTA aroB 215872 - 214673 - | 3-dehydroquinate synthase TERM 109 215097 - 215083 - G 70 -10 -3.15996 | opp_overlap 215083, overlap 215081 CAGCATGGACGAATA TGAGCC CAC GGCTCA TGCTTCCAATAAGCA fba 216845 - 216027 - | fructose-bisphosphate aldolase trpA 217870 - 217022 - | tryptophan synthase subunit alpha TERM 110 217538 - 217509 - G 78 -11.5 -3.07962 | gap 1, overlap 217529 217530 CCTGAGAGTCCAACA TCCGCGGCGCGTTT AAC AAACG-GTCGCGGA CCCTCCTCATCACCA trpB 219151 - 217904 - | tryptophan synthase subunit beta trpC 219963 - 219148 - | indole-3-glycerol-phosphate synthase TERM 111 219941 - 219925 - G 72 -10.9 -2.5955 | opp_overlap 219921 219918 AGCCGTCAGAATTGA TTGCACC GCA GGTGCAA GAGATTCTTCACTAG ogt 220052 - 220522 + | methylated-DNA--protein-cysteine methyltransferase blp 221117 - 220668 - | bacterioopsin-linked protein blp HQ1162A 222146 - 221148 - | hypothetical protein TERM 112 222270 - 222284 + r 72 -9.2 -3.56318 | opp_overlap 222269 222267 222270, overlap 222269 GAAAGAGAAAGAGAC CGCGGG TAA TCCGCG TGTTATTATTGCGGA TERM 113 222311 - 222324 + r 76 -8.1 -4.10407 | overlap 222320 CGGACTTGGGTTTGA CGGTC CAGA GACCG TTTCGTTCTTACTCT lon 224539 - 222290 - | ATP-dependent protease Lon nadR 224705 - 225340 + | nicotinamide-nucleotide adenylyltransferase TERM 114 226027 - 226052 + G 71 -3.9 -4.67982 | overlap 226022 GTTGATACCGGTGAC CCATTGCTCAC TGTT GGGAGTCATGG TTTTGTTGAGTGCGA HQ1165A 225337 - 226137 + | NAD operon protein TERM 115 226486 - 226524 + T 100 -16.2 -4.45083 | gap 2, opp_overlap 226484 226496, overlap 226522 ACCGCAGATGCAAGC CGGTGAAGTACCTCGGGG ATAAG CCCCGAGG--CTTCACCG TTTTGTCCGTGTCGC TERM 116 226516 - 226496 - T 83 -14 -2.71681 | opp_overlap 226486, overlap 226484 CAAGCCGGTGAAGTA CCTCGGGG ATAAG CCCCGAGG CTTCACCGTTTTGTC ths 228486 - 226921 - | thermosome subunit TERM 117 227519 - 227495 - G 81 -12.1 -3.02511 | overlap 227502 227504 227509 TCGAGTTCTTCAAGA CGACCAAGACG AGA CGCCCCGGTCG CACGAGCAACAGTGC HQ1167A 230214 - 229282 - | glycosyltransferase HQ1168A 231017 - 230226 - | S-adenosylmethionine-dependent methyltransferase-like protein HQ1169A 231252 - 231530 + | transcription regulator, ArsR like HQ1170A 231953 - 232771 + | hydrolase HQ1171A 232768 - 233739 + | hypothetical protein HQ1172A 233966 - 234364 + | hypothetical protein HQ1173A 236373 - 234637 - | Fe-S oxidoreductase HQ1174A 237652 - 236789 - | hypothetical protein HQ1175A 238870 - 237971 - | transporter of the drug/metabolite transporter (DMT) superfamily TERM 118 238632 - 238622 - G 71 -4 -4.80077 | CGAAAAGAAAAATAA CAAT GTC ATTG CGGTATATATTCCTC HQ1176A 239126 - 239284 + | hypothetical protein hsp20 239281 - 239793 + | hsp20 type chaperone HQ1178A 240575 - 239967 - | nudix family protein HQ1179A 241358 - 240789 - | hypothetical protein HQ1180A 242710 - 241580 - | glycosyltransferase-like protein HQ1182A 244892 - 243702 - | aldo/keto reductase family protein HQ1183A 245935 - 245027 - | sugar epimerase/dehydratase-like protein HQ1184A 246387 - 245935 - | hypothetical protein HQ1185A 249664 - 246563 - | hypothetical protein HQ1186A 250515 - 249664 - | hypothetical protein HQ1187A 250994 - 250512 - | hypothetical protein HQ1188A 251490 - 250996 - | hypothetical protein HQ1189A 253488 - 251653 - | hypothetical protein virB11 255572 - 253488 - | type II/IV secretion system proteins VirB11/TadA ( ATPase) TERM 119 255707 - 255677 - R 70 -9.1 -3.40403 | gap 1 CGCGTGTGATGACAA TCAC-CGTACGTGA TCGC TCACGGACGAGTGA GAGAATAATATTGTG HQ1191A 256130 - 255657 - | hypothetical protein HQ1192A 256984 - 256127 - | dentin sialophosphoprotein precursor HQ1193A 257398 - 261474 + | cell surface glycoprotein TERM 120 261788 - 261805 + T 70 -9.1 -3.32963 | overlap 261774 261789 TCGCACCCGCCCAAC TGGAGGC GGAT GCCTCCG TTATGAGGTCGCAGT TERM 121 261789 - 261804 + T 71 -10.4 -2.59564 | overlap 261774 261788 CGCACCCGCCCAACT GGAGGC GGAT GCCTCC GTTATGAGGTCGCAG TERM 122 261852 - 261882 + T 78 -12.7 -2.62184 | gap 1, opp_overlap 261852 261854 261859, overlap 261854 261859 261872 TGCCGACTGCACACA GAGACAA-CGCCTG CCGT CGGGCGTTTGTCTC TGCTATGCAGCGAGG TERM 123 261882 - 261852 - T 72 -10.5 -2.89564 | gap 1, opp_overlap 261852 261854 261859 261872, overlap 261854 261859 TGCCGACTGCACACA GAGAC-AACGCCTG CCGT CGGGCGTTTGTCTC TGCTATGCAGCGAGG TERM 124 261859 - 261874 + T 76 -8.2 -4.16301 | opp_overlap 261859 261854 261852, overlap 261854 261852 261872 TGCACACAGAGACAA CGCCTG CCGT CGGGCG TTTGTCTCTGCTATG HQ1194A 263228 - 262266 - | hypothetical protein gp2 264143 - 263292 - | glycoprotein gp2 HQ1196A 264863 - 264219 - | cell surface glycoprotein hmu2 274175 - 265518 - | cell surface glycoprotein TERM 125 267768 - 267790 + g 71 -9.2 -3.61268 | opp_overlap 267768, overlap 267762 TCCATCGTTCACGAA CGACACAGAT CGT GTTTGTGTCG TTTCAGGATTCAGTG TERM 126 270706 - 270718 + g 73 -7.7 -4.00042 | opp_overlap 270705 CTGGCGACTGAATAC CCGAA GGA TTCGG TTGTTTGCTCGCCGG TERM 127 272580 - 272567 - G 73 -9.5 -3.28708 | opp_overlap 272566 272564 272567 TAAACTGGAGATTAA CGCCG TTCC CGGCG CTCTTGTCCCCACCA HQ1199A 275795 - 275115 - | hypothetical protein sub 277237 - 276008 - | subtilisin-like serine protease HQ1201A 278206 - 277625 - | hypothetical protein TERM 128 278191 - 278172 - G 73 -3.4 -4.90778 | opp_overlap 278187, overlap 278173 GCGAGCGAAACAAAA GCGAGTGC AATT GCCCTCGT GCTGAGTCGTGTCAT TERM 129 278481 - 278498 + H 72 -8.5 -3.66288 | GTGCGCGAGGACGCT TGTACTC ATGT GAGTACA TTATCTTCACGAGTG TERM 130 278632 - 278652 + H 72 -2.6 -4.96468 | opp_overlap 278633, overlap 278633 AATTCAAATATAACT ATCGATAT AATAC ATATCGAC TTTTCTTTGCATTTG TERM 131 279504 - 279527 + G 74 -9.6 -3.53012 | gap 1, opp_overlap 279503 TGGCGTGTAACTGAC CGTGG-GAGTG ACG CACTCGCCGCG TTTGCCGACCCAGAA HQ1202A 279015 - 279575 + | hypothetical protein HQ1203A 279700 - 280251 + | hypothetical protein HQ1204A 280697 - 280915 + | hypothetical protein TERM 132 280954 - 280972 + F 76 -8.8 -3.73414 | opp_overlap 280949 280954 280956 GACACTAATAGGACA CACACGCG ACT CTCGTGTG TTTACATCTGATATC TERM 133 285814 - 285847 + G 72 -11.2 -2.71204 | opp_overlap 285824, overlap 285820 AACAACGCGACGCAT TCGATATTAACGAC GATGGA GTCGTTAATTTCGA TGATGTAGTTCGTCT HQ1205A 281001 - 285881 + | cell surface adhesin TERM 134 287324 - 287309 - g 71 -4.6 -4.65168 | ATGAGAGCGCAAAAA CGTCGG TTCG CGGACG TCTCACGAGCATCAC TERM 135 289010 - 288998 - g 73 -3.3 -4.93968 | overlap 289008 ATGCAGAAGTAAAAA TCGAC ACA GACGA TGGGACCGGCGAAAC TERM 136 289219 - 289199 - g 85 -13.3 -2.78384 | opp_overlap 289208 TCCCGGGTGATGAGA CGACGTTGC GCG GCAACGCCG ATAGCGGCGTTGACA TERM 137 289208 - 289235 + G 74 -11.2 -2.85874 | opp_overlap 289199 ATGAGACGACGTTGC GCGGCAACGCCG ATAG CGGCGTTGACAC TGTACTAATGTATGT TERM 138 290280 - 290264 - g 72 -10.9 -2.69649 | overlap 290263 ATACCCCTACACAAG CGTCATC CCG GATGACG AACACAGTAAAATCG csg 286783 - 290562 + | cell surface glycoprotein precursor TERM 139 292481 - 292453 - g 73 -10.4 -3.19371 | gap 1 ATTGATCCAAGCCAA GTCGATGAAGGTG AATA CACCTTCACCG-C TGCAGGCATCGAGGA csg 291388 - 294354 + | cell surface glycoprotein precursor sub 295263 - 297122 + | subtilisin-like serine protease TERM 140 297469 - 297431 - f 100 -17.4 -2.71681 | opp_overlap 297436 GAACTGGCGGAACCA GTCACGCGCTCGGACGGC GGA GCCGTGCGAGCGCTTGAT TGAGGAGTTGACGGA TERM 141 297436 - 297464 + F 100 -20.3 -3.3482 | opp_overlap 297431 GGCGGAACCAGTCAC GCGCTCGGACGGC GGA GCCGTGCGAGCGC TTGATTGAGGAGTTG TERM 142 297636 - 297693 + F 79 -9.79999 -3.73953 | gap 3, overlap 297638 297642 ACAGAGCCTTTATCA GC-GGCCAGGCTCCGAAGGTCGCCCTGCG GAA CGC-GGGCGACCTTCGG-GCCGATCTTGG TTTCGTCAGGCTACT TERM 143 297638 - 297689 + F 100 -20.3 -3.56704 | gap 3, overlap 297636 297642 AGAGCCTTTATCAGC GGCCAGGCTCCGAAGGTCGCCCTGCG GAA CGC-GGGCGACCTTCGG-GCC-GATC TTGGTTTCGTCAGGC TERM 144 297642 - 297686 + F 100 -23 -2.61027 | gap 2, overlap 297638 297636 CCTTTATCAGCGGCC AGGCTCCGAAGGTCGCCCTGCG GAA CGC-GGGCGACCTTCGG-GCCG ATCTTGGTTTCGTCA TERM 145 298203 - 298167 - f 83 -13.2 -3.14344 | gap 1, opp_overlap 298167, overlap 298150 298154 TACCTGCTTCACGAA GCGGAAGAG-GATGTCA GACA TAACATCACTCTCCCGC TCTATACCTGTGATT HQ1210A 298589 - 298966 + | hypothetical protein HQ1211A 298971 - 299219 + | hypothetical protein HQ1212A 299341 - 299739 + | hypothetical protein HQ1214A 301206 - 302834 + | hypothetical protein TERM 146 303727 - 303710 - g 70 -9.9 -3.15861 | opp_overlap 303715 GACCACCCGTATCAA TTGCTGC GATT GCAGCAA CGCTTGGATTCGGAG HQ1215A 302839 - 305178 + | RND superfamily multidrug efflux system protein HQ1216A 305171 - 305668 + | stress response protein HQ1217A 307177 - 305828 - | hypothetical protein HQ1218A 307442 - 307960 + | hypothetical protein HQ1219A 308086 - 308586 + | hypothetical protein polIVx 308586 - 310373 + | family X DNA-dependent DNA polymerase TERM 147 310463 - 310482 + F 73 -10.6 -2.99161 | overlap 310462 310477 310478 GCAGATTGACATCCT CCCCGCGC TGAA GCGCGAGG CTTTCTCCTCGATTC HQ1221A 310541 - 311092 + | hypothetical protein HQ1222A 312087 - 311119 - | hypothetical protein TERM 148 311685 - 311672 - G 70 -2.3 -4.91573 | overlap 311663 AAAAGACACCAAAAA GTGAC CATC GTCCC GAATGAAAAAACAGC HQ1223A 312287 - 312658 + | hypothetical protein TERM 149 312731 - 312708 - f 74 -3.9 -4.96762 | gap 1, opp_overlap 312710 312722, overlap 312710 312713 312717 312722 GACATACGAGAAAAA CG-CAATCGA GATAA TCGATCGTCG ATTATCGGGAAGTCA TERM 150 312737 - 312717 - f 73 -11.3 -2.61341 | opp_overlap 312710 312722, overlap 312710 312708 312713 312722 GAAAAACGCAATCGA GATAATCGA TCG TCGATTATC GGGAAGTCAACATAT TERM 151 312927 - 312943 + F 78 -12.3 -2.62735 | overlap 312936 GCGAACACTTTTTAT CGGAGCA CTC TGCTCCG TGCTGTGGACAGTAT HQ1224A 312943 - 313548 + | protease HQ1225A 314932 - 313928 - | sodium/arsenite symporter family protein HQ1226A 316629 - 315361 - | hypothetical protein tfbA 317766 - 316777 - | transcription initiation factor TFB TERM 152 317340 - 317358 + g 73 -4.5 -4.68103 | opp_overlap 317340 AAAGTGCAAACTGAA GATTCCG CTCGC CGGCATC TTTTGTTCGAATTCG rnhA 317977 - 318573 + | ribonuclease H I padR 319617 - 319258 - | transcription regulator ipp 319761 - 320294 + | inorganic pyrophosphatase HQ1232A 320415 - 320561 + | hypothetical protein HQ1233A 320798 - 321718 + | rhomboid family protein/GlpG-like protein nfi 321732 - 322577 + | endonuclease V (deoxyinosine 3'endonuclease) HQ1235A 322826 - 323683 + | short chain dehydrogenase/ reductase arsA 325127 - 323862 - | transport ATPase ( substrate arsenite) TERM 153 324367 - 324348 - G 71 -7.2 -4.10161 | gap 1 CATCATGCCTGAAAA TTGCTGTCG AAG CGAC-GCAA TGCGTCCAAGCATCG TERM 154 324875 - 324916 + g 76 -7.2 -4.31587 | overlap 324872 324876 AGACAACGAGGGTAT CGGTCCCAGCGGTTGCAG AGGCTA CTGCAGTTGCTGCGGCCA TTGTTGTTTTTCCAA TERM 155 324876 - 324915 + g 76 -10.7 -3.17868 | overlap 324875 324872 GACAACGAGGGTATC GGTCCCAGCGGTTGCAG AGGCTA CTGCAGTTGCTGCGGCC ATTGTTGTTTTTCCA aspC 326329 - 325208 - | PLP-dependent aminotransferase ( aspartate aminotransferase) TERM 156 326584 - 326570 - H 73 -4.2 -4.8048 | overlap 326581 CGTGGAGATCAAAAA CCCAGT ATA AATGGG GGCTTCGCCAACTTG cinA 326649 - 327167 + | CinA-like domain-containing protein HQ1239A 327354 - 327941 + | hypothetical protein HQ1240A 328911 - 328105 - | hypothetical protein nusG 329753 - 329301 - | transcription antitermination protein NusG secE 329933 - 329760 - | preprotein translocase subunit SecE ftsZ 331721 - 330405 - | cell division protein FtsZ TERM 157 331353 - 331366 + g 71 -3.8 -4.66537 | TGGGAGTGAGCCTGC CCCA CGACCC TGGG TTTTCTGTTCACCCA HQ1244A 333529 - 331955 - | hypothetical protein aroE 333818 - 334636 + | shikimate 5-dehydrogenase TERM 158 335577 - 335554 - g 73 -8.2 -3.89881 | gap 1 AGGAACCTGCAGAAA CGGTCGTGTCC ACC GGA-ACAACCG AGCAACAAAATGAAA HQ1246A 334956 - 335798 + | hypothetical protein ilvE 335795 - 336718 + | branched-chain amino acid aminotransferase HQ1248A 336773 - 337201 + | homolog to Rieske iron sulfur protein HQ1249A 338020 - 337547 - | GtrA-like family protein, cell surface polysaccharide biosynthesis protein TERM 159 337932 - 337918 - G 78 -5.6 -4.90906 | overlap 337919 TCATAATATCAAAAA CGGCTC CAA GAGCCC CTACCGAAATGAATT TERM 160 337931 - 337919 - G 71 -9.1 -3.53459 | overlap 337918 CATAATATCAAAAAC GGCTC CAA GAGCC CCTACCGAAATGAAT HQ1250A 339087 - 338023 - | glycosyl tranferase; dolichyl-phosphate beta-glucosyltransferase HQ1251A 339376 - 341895 + | hypothetical protein HQ1252A 342157 - 341900 - | hypothetical protein rpl44e 342278 - 342559 + | 50S ribosomal protein L44e rps27e 342563 - 342790 + | 30S ribosomal protein S27e tif2a 342888 - 343688 + | translation initiation factor IF-2 subunit alpha HQ1256A 343813 - 343995 + | H/ACA RNA-protein complex component Nop10p HQ1257A 344000 - 344758 + | hypothetical protein TERM 161 345389 - 345406 + F 71 -7.7 -3.85165 | opp_overlap 345379 AAGTACCACCCCACG GTAGCGC GCTC GTGCTAC TTTCCGTTTAGGGTA HQ1258A 345472 - 345948 + | hypothetical protein phfZ 347399 - 346446 - | phenazine biosynthesis protein prt 347514 - 348278 + | phosphoribosyltransferase HQ1261A 348291 - 349247 + | transporter mtaP 349950 - 350855 + | 5'-methylthioadenosine phosphorylase MtaP TERM 162 350999 - 350974 - T 71 -10.5 -2.71483 | ATATCTGGTCAATCA TCGTCTGCAAC GGCT GTTGGAGACGA TTCAGCGCTTGTCTT HQ1263A 351911 - 350967 - | smc operon protein smc 355500 - 351904 - | chromosome partition protein TERM 163 352707 - 352720 + g 75 -3.7 -5.03145 | overlap 352705 CAACAGTGTCACGCG CCGAC TCAC GCCGG TTTTTTGCCGCATTC TERM 164 353647 - 353675 + g 74 -3.8 -4.98255 | gap 1 TACACCGTGATGATT TGGTTG-TCGTGG AATC CCGCGGTCATCCA TTTTTGTAATTGGGA HQ1265A 355953 - 355630 - | smc operon protein gatB 356333 - 357823 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 165 358058 - 358015 - f 95 -13.3 -4.05181 | gap 2, opp_overlap 358011 358054 ACTAGAAACAGGAAA CCCCACCCTCACTGGAGCCGC GTCA GCGGCTG-AGT-AGGGTGAGG TAGCTCATATAATTT TERM 166 358393 - 358381 - g 74 -4.1 -4.99947 | CCCAACGAAACAAAA TATCG TGA CGACA TTGAAAAAGCTCGCT TERM 167 358416 - 358402 - g 83 -7 -4.7173 | opp_overlap 358404, overlap 358404 GACGACATTGAAAAA GCTCGC TCG GCGGGC ACGCCGTGTGATTAT TERM 168 358404 - 358427 + G 79 -10.2 -3.64259 | opp_overlap 358402 358404 CGACATTGAAAAAGC TCGCTCGGCG GGCA CGCCGTGTGA TTATTGCGACTGATT topA 358124 - 360697 + | DNA topoisomerase I csp 361197 - 361003 - | cold shock protein pcrB 361607 - 362326 + | geranylgeranylglyceryl phosphate synthase-like protein aspC 362844 - 364148 + | aspartyl-tRNA synthetase kin 364149 - 365063 + | sugar kinase HQ1272A 365924 - 366733 + | hypothetical protein HQ1275A 368415 - 367414 - | glutathione S-transferase HQ1276A 368587 - 369510 + | ribulose-1,5-biphosphate synthetase HQ1277A 370673 - 369729 - | hypothetical protein dcd 371290 - 370670 - | deoxycytidine triphosphate deaminase HQ1279A 372020 - 372358 + | peptidyl-tRNA hydrolase HQ1280A 373020 - 374123 + | signal-transducing histidine kinase/response regulator truD 374402 - 375856 + | tRNA pseudouridine synthase D HQ1282A 376496 - 377218 + | hypothetical protein TERM 169 377650 - 377628 - g 75 -10.6 -3.33419 | overlap 377622 377626 377630 ATGGCGAAATGAAGA GACCGGTGAA CTC TTCACCGGTG GAACGTACAATCCGG TERM 170 377648 - 377630 - g 88 -13.2 -3.2313 | overlap 377622 377628 377626 GGCGAAATGAAGAGA CCGGTGAA CTC TTCACCGG TGGAACGTACAATCC rpl37aR 377461 - 377739 + | ribosomal protein L37a.eR TERM 171 377811 - 377841 + G 71 -9 -3.61517 | overlap 377815 CGAGGAGTATGGCGG CGTTCGATGTCCAT TCT GTGGACATCGTGTG TTGTTAAAAGAGCGT TERM 172 377815 - 377837 + G 84 -12.8 -3.26444 | overlap 377811 GAGTATGGCGGCGTT CGATGTCCAT TCT GTGGACATCG TGTGTTGTTAAAAGA rpoP 377755 - 377889 + | DNA-directed RNA polymerase subunit P HQ1285A 378104 - 378520 + | rpo operon protein pfdB 378743 - 379132 + | prefoldin beta subunit HQ1287A 379125 - 379409 + | hypothetical protein HQ1288A 381535 - 379628 - | hypothetical protein TERM 173 380803 - 380793 - G 71 -4 -4.731 | AATCCACGAAGAAAA TCAA GCA TTGA AACATTAAGACTCCG guaAa 382118 - 381564 - | GMP synthase subunit A HQ1290A 383248 - 382589 - | hypothetical protein HQ1291A 383599 - 383958 + | hypothetical protein TERM 174 384156 - 384129 - f 73 -4.2 -4.73448 | opp_overlap 384128, overlap 384131 384134 ATATACATTCAAAAA TACCAGTCATAT GAGT ATATGACTCGTG GTCGATTTATTCGGG leuA 384154 - 385749 + | (R)-citramalate synthase TERM 175 385796 - 385778 - f 72 -8.8 -3.55444 | opp_overlap 385766 385780 CCTTCACGCGGTAAA CAGCGGGA TTC TCTCGCTG TTAAAGATAGCCAGC HQ1293A 385877 - 386245 + | hypothetical protein HQ1294A 387464 - 387006 - | hypothetical protein HQ1295A 387564 - 388769 + | ABC-type transport system, ATP-binding protein TERM 176 389409 - 389438 + G 85 -12.2 -3.29144 | overlap 389401 CAATTCCGTGGCTTC GGGCACTTCCGT TAGCAC ACGGAAGTGCGC TTCTCCAGCGAGTGA TERM 177 389563 - 389595 + G 71 -8.3 -3.76778 | opp_overlap 389562 389564, overlap 389564 TTTTCACTACGCAAC ACGCCGAGCACGACG GCT TGGTGTGCTTGGCGA TTATTAGTGGATTTT TERM 178 389564 - 389594 + G 76 -11.8 -2.84982 | opp_overlap 389562 389564, overlap 389563 TTTCACTACGCAACA CGCCGAGCACGACG GCT TGGTGTGCTTGGCG ATTATTAGTGGATTT HQ1296A 388766 - 389602 + | ABC-type transport system, permease protein HQ1297A 390103 - 389711 - | hypothetical protein phr 390242 - 391633 + | deoxyribodipyrimidine photolyase HQ1299A 391786 - 392454 + | F420-dependent NADP reductase hisE 393028 - 392726 - | phosphoribosyl-ATP pyrophosphatase TERM 179 393245 - 393255 + r 72 -5.4 -4.4078 | opp_overlap 393229, overlap 393229 393228 TTGATACTGCTGTGT CAAC ATT GTTG TTTTGATTGGCAAAA hisH 393839 - 393222 - | glutamine amidotransferase subunit PdxT secG 394128 - 393964 - | preprotein translocase subunit SecG TERM 180 394639 - 394690 + H 84 -13.9 -2.93164 | gap 1 CGTGTCATAGTTTGT GCTGGTTGACGCGTCTACCTGA CATTTGGCT TGAGGT-GTCGCGTCAACCAGC TCTCATTCCGTCTCA HQ1303A 395239 - 395583 + | hypothetical protein HQ1304A 396627 - 395983 - | hypothetical protein TERM 181 396136 - 396149 + g 75 -8.1 -4.15044 | AATAGTGGTAATCTT CAGCG TCTT CGCTG TTTGTTCGCCAAACC TERM 182 396439 - 396457 + g 76 -8.8 -4.13077 | AGTGCTAGTGCTACC GGACGAAC CCT GTTCGACC TTTCTGTACTGTGTT HQ1305A 396804 - 397310 + | hypothetical protein dppF 398723 - 397452 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein II TERM 183 398462 - 398472 + g 75 -3.2 -5.09225 | CCTCTGTATCAGAGA GGTC ACC GATC TTTTTTCCATCGAAT dppD 400105 - 398720 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I dppC 401132 - 400110 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease protein II TERM 184 401050 - 401030 - G 71 -4.7 -4.59853 | overlap 401032 GGAATGGTGCAAAAA TAGCCATTC CAA GAATGACAA TAAATAGACTGACAC dppB 402139 - 401132 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease protein I dppA 403792 - 402140 - | ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein HQ1311A 403949 - 404338 + | hypothetical protein HQ1312A 404910 - 405650 + | hypothetical protein TERM 185 406328 - 406338 + G 77 -6.8 -4.62872 | overlap 406324 GTATCAGTGCTGTCT CGTC AGC GACG TTTTTCGGAATTGAT TERM 186 406628 - 406612 - g 70 -2.2 -4.99134 | opp_overlap 406616 AGCGCAAAGGAAAAA GCCG TCGTTGAAG CGGC GATTAGCTTTATGCC TERM 187 406833 - 406820 - g 73 -9.5 -3.27121 | opp_overlap 406820, overlap 406813 ATCATAAATACGGAA CGCCG TATT CGGCG TTAATGGCGAGCGCA TERM 188 406820 - 406833 + G 70 -9.5 -3.14132 | opp_overlap 406813 406820 ATCATAAATACGGAA CGCCG TATT CGGCG TTAATGGCGAGCGCA cat2 405778 - 407232 + | cationic amino acid transport protein trkA 407292 - 407957 + | Trk-type potassium transport system, NAD-binding subunit asnC 408196 - 408885 + | transcriptional regulator HQ1316A 409386 - 408949 - | IS200-type transposase TERM 189 409735 - 409722 - g 77 -4.5 -4.87592 | CCACAGACAAGAAAA GAGCA TACC CGCTC GTCATGGCACACACC HQ1317A 409406 - 410353 + | IS1341-type transposase (nonfunctional,N-terminal part) HQ1317B 410354 - 410764 + | IS1341-type transposase (nonfunctional,C-terminal part) TERM 190 410806 - 410783 - T 75 -6.6 -4.431 | opp_overlap 410784 410796, overlap 410784 GAGGGACTTAGAAAA GCCAGGGGTC ACCC GACCCGTGGT CGTTTATGCTGATAC TERM 191 410784 - 410805 + T 70 -10.1 -3.04836 | opp_overlap 410784 410783, overlap 410796 AGGGACTTAGAAAAG CCAGGGGTC ACCC GACCCGTGG TCGTTTATGCTGATA TERM 192 410805 - 410784 - T 71 -10.1 -3.25378 | opp_overlap 410784 410796, overlap 410783 AGGGACTTAGAAAAG CCAGGGGTC ACCC GACCCGTGG TCGTTTATGCTGATA TERM 193 410796 - 410808 + T 77 -9.1 -4.00038 | opp_overlap 410784 410783, overlap 410784 AAGCCAGGGGTCACC CGACC CGT GGTCG TTTATGCTGATACTC act 412426 - 411986 - | acyl-CoA thioester hydrolase TERM 194 413162 - 413181 + r 81 -12.2 -3.18264 | GGCTTCGATTCGCTC GTCGTTCC ATTC GGAACGAC TTGCTCCGTGCGAGG TERM 195 413481 - 413463 - R 77 -10.2 -3.30474 | opp_overlap 413464, overlap 413456 TCGTAGAAGCAGGAA GCCCCGCC CTC AGCGAGGC CGTCAGGCCGAGCAC HQ1321A 414283 - 413660 - | hypothetical protein HQ1322A 415800 - 415018 - | hypothetical protein TERM 196 415284 - 415304 + g 74 -9.1 -3.65754 | opp_overlap 415284, overlap 415286 TCGTTGCACACAGTA TGTGGGATA GTG TATCCCATA TTTGGAGTAATTTAT TERM 197 415286 - 415302 + g 73 -9.5 -3.40134 | opp_overlap 415284, overlap 415284 GTTGCACACAGTATG TGGGATA GTG TATCCCA TATTTGGAGTAATTT trxA 416508 - 416771 + | thioredoxin rpl40e 417121 - 417270 + | 50S ribosomal protein L40e HQ1326A 419245 - 418409 - | hypothetical protein TERM 198 418931 - 418957 + g 78 -12.2 -2.50016 | opp_overlap 418934, overlap 418930 418934 418935 GTGCACGTCGAGACG GAACCGGGCCCG CGT CGCGCCCGCTTC GTATTGGTAGTCGGC TERM 199 418935 - 418953 + g 75 -11.6 -2.63616 | opp_overlap 418934, overlap 418934 418931 418930 ACGTCGAGACGGAAC CGGGCCCG CGT CGCGCCCG CTTCGTATTGGTAGT HQ1327A 420180 - 420347 + | hypothetical protein TERM 200 423271 - 423260 - g 73 -2.2 -5.14965 | ACTTGCAGTAAAAAA CACG CAGA CATG GATAGCAAGAGCTGC tadA 422427 - 424856 + | type II/IV secretion system protein, ATP binding protein tadC 424856 - 426793 + | type II secretion system, transmembrane protein TadC HQ1330A 426793 - 427599 + | hypothetical protein HQ1331A 427596 - 428402 + | hypothetical protein HQ1332A 428399 - 429085 + | hypothetical protein HQ1334A 429608 - 430183 + | hypothetical protein TERM 201 430767 - 430748 - g 77 -8.6 -4.15565 | opp_overlap 430751, overlap 430751 TCGATCATGGGAAAA CAACGCTC GTTC AAGCGTTG TCCGGTTCATGGACA tif2g 430681 - 431910 + | translation initiation factor IF-2 subunit gamma HQ1336A 432086 - 432715 + | rpo operon protein rpoE1 432719 - 433303 + | DNA-directed RNA polymerase subunit E' rpoE2 433304 - 433501 + | DNA-directed RNA polymerase subunit E'' HQ1339A 433512 - 434072 + | rpo operon protein TERM 202 434249 - 434259 + F 83 -4.6 -5.40072 | CACTGAGGCAGCATC GGGG ATT CCTC TTTTTTTGCGGAAGG rps24e 434504 - 434821 + | 30S ribosomal protein S24e gcp 435032 - 436633 + | O-sialoglycoprotein endopeptidase/protein kinase TERM 203 436768 - 436804 + F 70 -9.4 -3.30771 | overlap 436770 GGGTGCGGATGCGGG TGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTA TTCTCGACCATATAC TERM 204 436770 - 436802 + F 71 -9.8 -3.22102 | overlap 436768 GTGCGGATGCGGGTG GGACTGCTGGCGGT GCCAA GCCGCCGGTACTCC TATTCTCGACCATAT HQ1342A 437337 - 437600 + | hypothetical protein TERM 205 438150 - 438121 - g 79 -11.5 -3.10057 | overlap 438119 438115 438123 ATACAGATACAGAGA CACCTCCAGTGAA ACTA TTCACTGGAGAAG TAAGCGGTCGTATTG TERM 206 438148 - 438123 - g 84 -12.7 -3.10057 | overlap 438121 438119 438115 ACAGATACAGAGACA CCTCCAGTGAA ACTA TTCACTGGAGA AGTAAGCGGTCGTAT ham1 437637 - 438317 + | nucleoside-triphosphatase HQ1344A 439158 - 438397 - | hypothetical protein trkA 440166 - 439507 - | potassium transport system, NAD-binding protein csg 440958 - 440296 - | cell surface glycoprotein precursor HQ1347A 441446 - 441243 - | hypothetical protein ilvA 442778 - 441633 - | threonine dehydratase citZ 444261 - 443125 - | citrate (si)-synthase TERM 207 444803 - 444768 - H 70 -9.8 -3.01924 | gap 1, opp_overlap 444770 444771, overlap 444772 GATTTGTGGGTAAGA GACA-GCGCTAAAGCAC ACG GGGTTTTAGCGCCTGTC CTATCAATAAGCCAA TERM 208 446053 - 446067 + G 71 -8.6 -3.62616 | GGCTTGTTCATATTG CTTCAG CGA CTGAAG TTATCTCTGATGCTG pchB 445191 - 446414 + | potassium channel protein HQ1351A 446731 - 446441 - | hypothetical protein TERM 209 446905 - 446878 - g 72 -11.3 -2.51464 | overlap 446877 446880 TGACTATTCATTAAT GACCACACTCG GTACGG CGAGTGCGGCC CCGGGTGAAATTGAT TERM 210 446903 - 446880 - g 71 -10.3 -2.79276 | overlap 446878 446877 ACTATTCATTAATGA CCACACTCG GTACGG CGAGTGCGG CCCCGGGTGAAATTG HQ1352A 446876 - 447832 + | hypothetical protein TERM 211 447860 - 447838 - T 72 -5.6 -4.45083 | opp_overlap 447841 TTCATATTGAGAAAA TAATGTCAGC ATT ACCGACATCA CTTCAATTATGCTGT TERM 212 448088 - 448110 + T 81 -12.6 -3.27298 | opp_overlap 448089, overlap 448089 TCCAGTTGTGAATCC ACCCCGGGGT CAA GCCCCGGGGC TTCCTGATTCAACGA TERM 213 448109 - 448089 - T 90 -15.4 -2.52896 | opp_overlap 448088 448089 CCAGTTGTGAATCCA CCCCGGGG TCAAG CCCCGGGG CTTCCTGATTCAACG TERM 214 448089 - 448109 + T 90 -16.1 -2.56164 | opp_overlap 448089, overlap 448088 CCAGTTGTGAATCCA CCCCGGGGT CAA GCCCCGGGG CTTCCTGATTCAACG TERM 215 448255 - 448288 + T 70 -8.9 -3.34013 | gap 1, opp_overlap 448245 448251 448249, overlap 448245 AAAATCGAAGATTTT CGTGATCACGAGAGAC TTT GTCTCTCG-GACGACG TTAATTCGGAGCGTC HQ1354A 449593 - 449441 - | hypothetical protein thrC 449749 - 450549 + | threonine synthase HQ1356A 451087 - 452460 + | IS1341-type transposase pimT 453403 - 452564 - | protein-L-isoaspartate O-methyltransferase HQ1358A 454147 - 453494 - | hypothetical protein pepB 455421 - 454465 - | aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) gapB 455564 - 456637 + | glyceraldehyde-3-phosphate dehydrogenase TERM 216 456866 - 456884 + T 76 -8.2 -4.17296 | opp_overlap 456870, overlap 456870 CATGGACCGAGCCAT CAGACAGT TCG ACTGTTTG TTTGTGTGTGTCCGC TERM 217 456870 - 456880 + T 74 -5.4 -4.66625 | opp_overlap 456870, overlap 456866 GACCGAGCCATCAGA CAGT TCG ACTG TTTGTTTGTGTGTGT HQ1361A 457278 - 456865 - | hypothetical protein HQ1362A 457594 - 457890 + | hypothetical protein pepQ 459439 - 458045 - | Xaa-Pro aminopeptidase uvrD 461292 - 459436 - | DNA helicase II HQ1366A 461776 - 462258 + | hypothetical protein TERM 218 462696 - 462734 + T 93 -11.8 -3.66784 | gap 2, opp_overlap 462696, overlap 462704 TGTGCAGACCCCAAA CGGGGAAG--CCTCGGGG CTTGA CCCCGAGGTACTTCACCG TTATCTTGCGACTCA TERM 219 462734 - 462696 - T 88 -12.5 -3.63627 | gap 2, opp_overlap 462696 462704 TGTGCAGACCCCAAA CGGGGAAG--CCTCGGGGC TTG ACCCCGAGGTACTTCACCG TTATCTTGCGACTCA TERM 220 462704 - 462724 + T 83 -14 -2.74019 | opp_overlap 462696, overlap 462696 CCCCAAACGGGGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACCGTTATC TERM 221 463042 - 463022 - T 73 -11.1 -2.63207 | opp_overlap 463022, overlap 463014 463021 AAGACTACCGATAAG CCTCGGGAC CTG ACCCCGAGG TTGTTGACTGACGGA TERM 222 463022 - 463042 + T 79 -9.7 -3.67597 | opp_overlap 463014 463022 463021 AAGACTACCGATAAG CCTCGGG ACCTGAC CCCGAGG TTGTTGACTGACGGA cxp 465046 - 463457 - | carboxypeptidase TERM 223 464226 - 464209 - G 77 -4.1 -5.03145 | opp_overlap 464209, overlap 464210 GAATTGTTGAAAAAA GTGATCC AAGC GGATCAG TCTCATCAAATCGCG TERM 224 465485 - 465495 + r 74 -6.8 -4.35483 | opp_overlap 465484, overlap 465471 ACTCCTCGAGAAAGG GGGT TTT ACCC TTTATTATAATAAAA argE 466669 - 465527 - | acetylornithine deacetylase TERM 225 466612 - 466653 + g 71 -10.4 -2.85351 | gap 2, opp_overlap 466612, overlap 466616 GACTTGGGATTGAAA CAAGCGTTCGTG-TGAG-TG AGAC CAGCTCATCGCGAACGTTTG TGTGCTCTAAAGACA TERM 226 466616 - 466649 + g 73 -7.6 -4.11404 | gap 2, opp_overlap 466612, overlap 466612 TGGGATTGAAACAAG CGTTCGTG-TGAG-TG AGAC CAGCTCATCGCGAACG TTTGTGTGCTCTAAA HQ1369A 466800 - 468707 + | ATPase HQ1370A 469502 - 469155 - | ArsR family transcriptional regulator TERM 227 469670 - 469714 + G 70 -9.9 -3.12351 | opp_overlap 469675 GTCACCTTCGAGGGA TCACAGTGACGACGCTTGC CTGTCTT GCTGGCGTCGGCGCTGCGA TTACATCTGGACAGG HQ1371A 469624 - 469938 + | hypothetical protein HQ1372A 469943 - 471790 + | putative ATPase RIL TERM 228 471784 - 471767 - f 75 -6.3 -4.37863 | gap 1, overlap 471764 AGACAAAAACAACAA GGCG-AGT ACT ACTACGCC CCATAATGCCTTCTC HQ1373A 472088 - 472549 + | stress response protein TERM 229 472668 - 472637 - T 79 -12.5 -2.85545 | overlap 472634 472632 472641 GCCTGAATAATAGCA TCAATCACTCGTA CACGTC TACGAGCGATTGA ACAACCGCCGCACGG TERM 230 472686 - 472673 - T 79 -9.5 -3.68569 | CGAGCGATTGAACAA CCGCC GCAC GGCGG TAGGACGATCGTGAG HQ1374A 473863 - 473342 - | archaemetzincin-like protein HQ1375A 473903 - 474316 + | hypothetical protein HQ1376A 474453 - 475316 + | hypothetical protein HQ1377A 476258 - 475620 - | hydrolase ( hydroxyacylglutathione hydrolase) HQ1378A 476662 - 476838 + | hypothetical protein HQ1379A 477012 - 477605 + | hypothetical protein HQ1380A 477681 - 478379 + | uracil-DNA glycosylase-like protein phnE 479382 - 478381 - | ABC-type phosphate/phosphonate/phosphite transport system, permease protein TERM 231 478961 - 478945 - G 70 -7.9 -3.90943 | GAAATTAAACGGAAA CGGAGTG ACA CGCTCCG ACCCAAGGACACCAA phnC 480293 - 479379 - | ABC-type phosphate/phosphonate/phosphite transport system, ATP-binding protein phnD 481307 - 480324 - | ABC-type phosphate/phosphonate/phosphite transport system, substrate-binding protein hisH 481417 - 482127 + | imidazole glycerol phosphate synthase subunit HisH pheA 482167 - 482973 + | prephenate dehydratase ocd 484336 - 483287 - | ornithine cyclodeaminase TERM 232 484501 - 484489 - R 72 -6.3 -4.33928 | TAGCGCAAATACAAA TCAGA GGC TCTGA GATAGTAGGTTACCT thsB 486203 - 484527 - | thermosome, beta subunit TERM 233 486247 - 486272 + H 73 -9.8 -3.33492 | opp_overlap 486260 TATAAATATTTTGTT GACGTCACAC AATGTC GTGTGATGTC TTATCACATAACTCG csp 486394 - 486690 + | cold shock protein HQ1389A 486813 - 487220 + | hypothetical protein HQ1390A 487228 - 487941 + | hypothetical protein rpl10e 488010 - 488540 + | 50S ribosomal protein L10e TERM 234 489800 - 489781 - f 75 -10 -3.57883 | overlap 489772 AGAACAGGGCGGAAA CCCACAAC TTTA GCTGTGGG TGACTAACTCATACT HQ1392A 489831 - 490700 + | homolog of lysine biosynthesis regulator/ribosomal protein S6 modification enzyme (glutaminyl transferase) hsp20 491324 - 490962 - | hsp20 type chaperone TERM 235 492215 - 492200 - g 76 -9 -3.85567 | AATTCGAAATCGAAA GTGGTC TTTT GACCAC TGTCCACGCATACAC gapB 491629 - 492717 + | glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating) pgk 492823 - 494058 + | phosphoglycerate kinase ribC 494213 - 494842 + | riboflavin synthase subunit alpha HQ1397A 496503 - 495499 - | hypothetical protein HQ1398A 496864 - 498381 + | ribonuclease act 499675 - 499223 - | acyl-CoA thioester hydrolase HQ1400A 500097 - 499936 - | hypothetical protein HQ1401A 500236 - 500541 + | hypothetical protein TERM 236 500978 - 500964 - T 70 -10 -2.94912 | TGTCCAACTCAGAGA GGAACG GGA CGTTCC AAATCAACGTCGTCT TERM 237 501153 - 501119 - T 70 -9.3 -3.35467 | gap 1, opp_overlap 501117 501122 501146 TCGACAAAGCAGGAA GCCTCGGGGCTCTGAT GTTG ATGTGA-CCCCGAGGC AGGTTCACTGTGAGA HQ1402A 501951 - 501226 - | hypothetical protein minD 502726 - 501953 - | cell division inhibitor MinD TERM 238 502663 - 502674 + g 75 -5.8 -4.50988 | overlap 502658 GTGCCATGCCGAGTG CGAG TGTG CTCG TTGTTTTTCCTGTCC cbiP 504589 - 502805 - | cobyric acid synthase TERM 239 503802 - 503785 - G 85 -11.3 -3.80893 | opp_overlap 503781 503788 503801, overlap 503779 503788 ACGGTATAACCGAAA GAACCGG AATT CCGGTTC GATCTTCGATCGTCT TERM 240 503799 - 503788 - G 71 -7.2 -4.03167 | opp_overlap 503781 503788, overlap 503779 503785 GTATAACCGAAAGAA CCGG AATT CCGG TTCGATCTTCGATCG cobO 505489 - 504758 - | cob(I)alamin adenosyltransferase TERM 241 505271 - 505251 - G 78 -11.9 -2.9585 | overlap 505246 ATAAACTGAAGCATA TGGACACGG AAG CCATGTCCA ACAGCACGGAATGCC TERM 242 506140 - 506121 - R 86 -12.1 -3.53444 | GCAGTTGGGGGGAAA CCGCGCC GTTCAG GGCGCGG AGGATATCATACTCG cbiZ 507255 - 506233 - | adenosylcobinamide amidohydrolase cobD 508322 - 507267 - | L-threonine-O-3-phosphate decarboxylase cobT 509544 - 508510 - | hypothetical protein cobY 510263 - 509535 - | GTP:adenosylcobinamide-phosphate guanylyltransferase TERM 243 509972 - 509928 - G 76 -10 -3.6682 | gap 1, opp_overlap 509928 509934 TGCTATTGATTCAAA CCGAGATGCTTCACGAACCGC GGTT GCAGTTCGGGGTGCAT-TCGG TGATGTCACTGCCCA cobS 511030 - 510266 - | cobalamin (5'-phosphate) synthase cbiB 511941 - 511021 - | cobalamine biosynthesis protein (adenosylcobinamide biosynthesis protein) HQ1412A 512651 - 512004 - | cobalamine operon protein; hydrolase HQ1413A 512793 - 513344 + | hypothetical protein TERM 244 513697 - 513678 - g 76 -8.6 -4.04023 | gap 1 ATTAATGAACAACAA GACGAC-CG TCA CGAGTCGTC AAGCAAACATACGTG HQ1414A 513546 - 513725 + | transcription regulator TERM 245 513978 - 513994 + G 82 -12.3 -3.23216 | opp_overlap 513978 GATTCTTGTCGGAAA GTCCCTG ACA CAGGGAC TTGGTGCTGGTGGCG TERM 246 513994 - 513978 - g 86 -12.3 -3.53224 | opp_overlap 513978 GATTCTTGTCGGAAA GTCCCTG ACA CAGGGAC TTGGTGCTGGTGGCG ftsZ 513730 - 514932 + | cell division protein FtsZ HQ1416A 515943 - 515131 - | S-adenosylmethionine-dependent methyltransferase nfo 516787 - 515951 - | endonuclease IV aldH 518294 - 516933 - | aldehyde dehydrogenase (succinate-semialdehyde dehydrogenase homolog) TERM 247 518943 - 518996 + H 72 -9.4 -3.50335 | gap 1, opp_overlap 518944, overlap 518944 518991 AGAGCCACGTGAACT ACCCTGCCCT-ACCGCGCTCGGGGC TCCCC GCCCCTCGCTTGGTGAGGACAGGGC TTCCTGTTTCTGGAG TERM 248 518995 - 518944 - H 81 -12.9 -2.73681 | gap 1, opp_overlap 518944 518943 518991 GAGCCACGTGAACTA CCCTGCCCT-ACCGCGCTCGGGGC TCCCC GCCCCTCGCTTGGTGAGGACAGGG CTTCCTGTTTCTGGA TERM 249 518944 - 518995 + H 81 -12.9 -2.69719 | gap 1, opp_overlap 518944, overlap 518943 518991 GAGCCACGTGAACTA CCCTGCCCT-ACCGCGCTCGGGGC TCCCC GCCCCTCGCTTGGTGAGGACAGGG CTTCCTGTTTCTGGA TERM 250 520127 - 520115 - g 77 -6.9 -4.54047 | opp_overlap 520125 CGATGCGACACAAAA GGCAC TGA GCGCC GGCGCGGATTACGTT kef 519309 - 520460 + | Kef-type K+ transporter NAD-binding component pkn 521230 - 522147 + | RIO-like serine/threonine protein kinase TERM 251 522729 - 522687 - T 70 -9 -3.322 | opp_overlap 522698, overlap 522689 ACTTCTACAGATTAA CAGGCAGAGTGCCTCGGGGC TTG ACCCCGAGGTACTTCACCAA CAGACGGCCGGAGGG TERM 252 522727 - 522689 - T 86 -13.8 -3.22777 | opp_overlap 522698, overlap 522687 TTCTACAGATTAACA GGCAGAGTGCCTCGGGGC TTG ACCCCGAGGTACTTCACC AACAGACGGCCGGAG TERM 253 522698 - 522718 + T 83 -14 -2.70932 | opp_overlap 522689 522687 TTAACAGGCAGAGTG CCTCGGGG CTTGA CCCCGAGG TACTTCACCAACAGA cysA 524122 - 523070 - | ABC transporter ATP-binding protein modB 524934 - 524119 - | ABC transporter permease modA 526177 - 525089 - | ABC transporter substrate-binding protein TERM 254 525309 - 525298 - G 83 -7.2 -4.8048 | opp_overlap 525298 525297 TGTGGATATTAAAAA CCGC TACT GCGG CTTTGCTCATATGTC TERM 255 526650 - 526621 - g 85 -11.5 -3.68908 | overlap 526624 AAAGAGGCATGGAAA CAACCCGGCGA TGGCAAGC TCGCCGAGTTG CAATGGCAGCGAAAA TERM 256 526647 - 526624 - g 71 -7.4 -3.9693 | overlap 526621 GAGGCATGGAAACAA CCCGGCGA TGGCAAGC TCGCCGAG TTGCAATGGCAGCGA rpl15R 526579 - 527169 + | 50S ribosomal protein L15e moeB 527238 - 528125 + | molybdenum cofactor biosynthesis protein MoeB menA 529248 - 528292 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 257 528918 - 528935 + g 78 -7.7 -4.4078 | CGGTTGTGGGGTCGA CATTCCC TGCT GGGAGTG TTTTACTTCCCCCGG HQ1427A 529787 - 529272 - | hypothetical protein HQ1428A 530887 - 531108 + | hypothetical protein HQ1429A 531458 - 531123 - | hypothetical protein HQ1430A 532039 - 531620 - | CBS domain-containing protein potA 532392 - 533501 + | spermidine/putrescine ABC transporter ATPase potB 533498 - 534439 + | spermidine/putrescine ABC transporter permease TERM 258 535216 - 535244 + G 80 -6.7 -4.71426 | AACGCGATGGGAACT GTCATTGTTGGAG TTT CACTGACAATGGC TTTTCTTGCTGAACG potC 534436 - 535287 + | spermidine/putrescine ABC transporter permease potD 535334 - 536455 + | spermidine/putrescine ABC transporter permease TERM 259 537141 - 537131 - f 73 -4.6 -4.78077 | TGTAAGTAAAAGAAA GGCC TGA AGCC ACGAGAATCTCACGG rpa 537725 - 539281 + | replication factor A TERM 260 539635 - 539616 - g 74 -9.2 -3.65902 | CTCATCGCATCCAAA CGCACGGG GCTA CCCTTGCG GTCACCGCTGCAGAA hstA 539507 - 539938 + | histone aup 539943 - 540956 + | histone deacetylase cca 542434 - 541037 - | tRNA CCA-pyrophosphorylase TERM 261 542716 - 542751 + r 86 -11.9 -3.54935 | gap 1, opp_overlap 542706 542707, overlap 542720 TACAAGCGGAGCAGG GCG-AGTGCCTCGGGG CTTGT CCCCGAGGTACTTCAC TTTCCACGAAGTTTA TERM 262 542720 - 542746 + r 100 -15.9 -3.27525 | opp_overlap 542706 542707, overlap 542716 AGCGGAGCAGGGCGA GTGCCTCGGGG CTTGT CCCCGAGGTAC TTCACTTTCCACGAA HQ1439A 543999 - 543445 - | membrane-bound metal-dependent hydrolase HQ1440A 544876 - 545106 + | hypothetical protein HQ1441A 545235 - 545501 + | hypothetical protein TERM 263 546011 - 545994 - f 72 -4.9 -4.60886 | AGATAACTAAATAAA TAGGCAT ATAT ATACCTA CATACAAAAATACAG Imp 546031 - 547056 + | TRAP-type transport system,periplasmic protein TERM 264 547098 - 547121 + F 72 -3.2 -5.07652 | overlap 547086 547101 TCATTGGTTCATTAC CAATCTAATT AATC AGTTAGATAG TTTTATTTTGACCAC HQ1443A 547352 - 547846 + | TRAP-type transport system protein TERM 265 547982 - 548005 + G 73 -9.6 -3.38134 | GTTCACTCACTGGTA TTGCAGCTGT TATT ACAGCGGCAA TTGGTGTGCTTTTCT HQ1444A 547843 - 550551 + | TRAP-type transport system, permease protein TERM 266 551613 - 551591 - g 80 -2.7 -5.5074 | gap 1, overlap 551612 TAATCCAACAAAAAA GATG-GTTCC AACC GGCACACATC GTGCCGCAACGACGC phr 550701 - 552860 + | deoxyribodipyrimidine photolyase HQ1446A 552993 - 553148 + | hypothetical protein HQ1448A 554322 - 553900 - | hypothetical protein adkA 554888 - 554334 - | adenylate kinase HQ1450A 555191 - 554901 - | hypothetical protein focA 555911 - 557719 + | formate/nitrate transporter HQ1452A 557832 - 558272 + | hypothetical protein HQ1453A 559103 - 558279 - | hypothetical protein HQ1454A 559305 - 559793 + | hypothetical protein kdgK 560920 - 559871 - | 2-keto-3-deoxygluconate kinase mutL 563299 - 560981 - | DNA mismatch repair protein MutL TERM 267 562851 - 562839 - G 73 -3.3 -4.89063 | GTATTGAAAAATAAA TCGCG TAT CTCGA CTACTGTTCCCTCTG mutT 563814 - 563296 - | mut/nudix family protein HQ1458A 565116 - 564232 - | hypothetical protein HQ1459A 565388 - 565113 - | hypothetical protein TERM 268 565202 - 565184 - G 76 -9.6 -3.66883 | TCAACAGATGCGAAA GCCACAGT CCA ACTGTGAC GCCAAATAGAGTTCC mutS1 568638 - 565843 - | DNA mismatch repair protein TERM 269 566705 - 566667 - G 71 -8.9 -3.55548 | gap 1 CAACACGCGTGTAAA TTCCATCAACAGCC-CCA ATTG TGGCGGCTGCTGCTGGGA CAAAACTTCCAGCGT HQ1461A 569998 - 568952 - | short chain dehydrogenase/ reductase HQ1462A 570467 - 571312 + | succinylglutamate desuccinylase / aspartoacylase family protein HQ1463A 571697 - 572497 + | hypothetical protein TERM 270 573273 - 573293 + G 74 -11.1 -2.93073 | overlap 573269 573275 CCGCCCGAGCAGGAT CACGGTCGG ATA CCGGTCGTG TCATTATTGAAGAAC purT 572705 - 573910 + | phosphoribosylglycinamide formyltransferase 2; formate-dependent GAR transformylase suhB 575725 - 574031 - | inositol-1(or 4)-monophosphatase/ fructose-1,6-bisphosphatase TERM 271 574708 - 574719 + g 71 -4.4 -4.69326 | CTTCGGTGACGATAT CTGA CTTG TCAG TTTTATATTGAATAT TERM 272 574799 - 574811 + g 75 -10.5 -3.40112 | overlap 574798 574796 AGCTTCTCTCGCGAC GCGCG CAG CGCGC TCTTTGAAATCTGAT psp 575978 - 576379 + | ribonuclease, PSP-type; translation intitiation inhibition protein narK 578530 - 577298 - | nitrate/nitrite transporter TERM 273 577635 - 577612 - G 74 -3 -5.02074 | overlap 577614 577632 TGACTGTGTAAAAAA GAGCAACCGT GACC ACGATAGCAC CAACAAACGATGCGG pstB 579801 - 578878 - | ABC-type phosphate transport system, ATP-binding protein pstA 581401 - 579794 - | ABC-type phosphate transport system, permease protein I TERM 274 581245 - 581190 - G 75 -7.6 -4.14243 | opp_overlap 581242 581244 GACCCGATGCCAAAA CCGATCACGACACCGCCGAGTAGAAC CAAT ATTCCACCTAACAGTGTTACGATCGG GATCCCAGCGACGGG pstC 582525 - 581401 - | ABC-type phosphate transport system, permease protein II TERM 275 582032 - 582018 - G 73 -3.5 -4.96848 | TCTCTGAGAGAAAAA GCGCT GCTGA AACGC CAAGAGGTGCGGCTA TERM 276 582405 - 582390 - G 79 -10.4 -3.74526 | opp_overlap 582389 582388 GTAGGAATCCAACAA GCGCTG ACAC CAGCGC GATTGTCATAATACC pstS 583756 - 582584 - | ABC-type phosphate transport system, substrate binding protein HQ1472A 583887 - 584873 + | halo transducer protein TERM 277 586527 - 586508 - T 70 -2.1 -5.02074 | TGACTGCGTAAAAAA GGGTTTC GAATCG GAAAACC ACCTGACTGCGTTGC prt 587418 - 586735 - | phosphoribosyltransferase rbsK 588587 - 587511 - | ribokinase HQ1475A 589545 - 588832 - | hypothetical protein HQ1476A 590077 - 589616 - | hypothetical protein dppF 591535 - 590102 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein II dppD 592667 - 591528 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I TERM 278 592606 - 592577 - G 77 -8.7 -4.21773 | gap 1, opp_overlap 592576 592597, overlap 592580 TGTGAACAGAAAGAA CGACATCATCATCA GGT TGA-GCTGATGTCG ACGTTTTTCGGTCGA dppC 594229 - 592667 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease components II dppB 595463 - 594372 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease protein I dppA 597446 - 595590 - | ABC-type dipeptide/oligopeptide/nickel transport systems, substrate-binding protein dppF 598751 - 597591 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein II TERM 279 598160 - 598124 - G 77 -8.8 -4.22475 | gap 1, overlap 598126 CATCGAAAACAATAA GATCAGGCTCTGTAATG AGCG CACGACAGAGCCCGA-C GCGTTGACGCTGACC TERM 280 598159 - 598126 - G 88 -12.5 -3.69534 | overlap 598124 TCGAAAACAATAAGA TCAGGCTCTGTAATG AGCG CACGACAGAGCCCGA CGCGTTGACGCTGAC dppD 599842 - 598748 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I dppC 600750 - 599842 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease protein II dppB 601710 - 600751 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease protein I TERM 281 601652 - 601638 - G 80 -4.2 -5.19251 | overlap 601639 GAACAGCAACAAAAA CCGCTG TGG CAACGA TATAAACAACAATTA dppA 603438 - 601711 - | ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein TERM 282 604743 - 604756 + G 74 -3.1 -5.06414 | GACGCTCGGTGTCAT TATCG GTCT CGGTA TTTTTCTTGGAGCGC oxlT 604201 - 605511 + | oxalate/formate antiporter TERM 283 605550 - 605535 - T 72 -6 -4.55128 | ATCTCTAAACGAAAA GGAGCG TGAA CGCGCC ACTGTGGGTGAGGTA ggt 607314 - 605716 - | gamma-glutamyltransferase TERM 284 606773 - 606756 - G 70 -9.9 -3.20367 | overlap 606731 GAACAACGTCACCAA CAGATGG AGTG CCATCTG ATACACTGAAAGTCT TERM 285 607486 - 607476 - R 73 -4 -4.8048 | TCTTCAGACGAAAAA TATC AAT GATA TGATCGCCAGTGACG TERM 286 607588 - 607607 + r 73 -10.6 -2.99161 | overlap 607587 607602 607603 AATTGTTGACATCCT CCCCGCGC TGAA GCGCGAGG CTTTCTCCTCGATTC dpg 609640 - 607691 - | dolichyl-phosphate beta-glucosyltransferase TERM 287 609852 - 609816 - H 73 -11.5 -2.53345 | opp_overlap 609821, overlap 609813 TCTACAGATTAACAG GCAGAGTGCCTCGGGGC TTG ACCCCGAGGTACTTCAC TGCTCAAAAACTGAA TERM 288 609821 - 609847 + H 93 -15.9 -3.09516 | opp_overlap 609816 609813 AGATTAACAGGCAGA GTGCCTCGGGG CTTGA CCCCGAGGTAC TTCACTGCTCAAAAA HQ1490A 610294 - 610611 + | hypothetical protein HQ1491A 611309 - 610641 - | hypothetical protein TERM 289 611466 - 611480 + r 75 -2.7 -5.10461 | opp_overlap 611467, overlap 611467 GTCAAGTATCTAATT ACCGG TTTTC CCGGC TTTTTATTCACTCAC HQ1492A 612663 - 611488 - | stomatin-like protein abcA 612860 - 613888 + | ABC-type transport system ATP-binding protein abcP 613885 - 614646 + | ABC-type transport system permease protein eda 614744 - 615418 + | KHG/KDPG aldolase (4-hydroxy-2-oxoglutarate aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase) HQ1496A 617541 - 615652 - | hypothetical protein HQ1497A 618011 - 617544 - | hypothetical protein TERM 290 617594 - 617610 + g 70 -8 -3.87815 | overlap 617579 GCTCTCGAAGACGTT CGCGAA GCTCA TTCGCG TTTGTCCGGCTGAGA HQ1498A 619109 - 618126 - | hypothetical protein HQ1499A 619725 - 619288 - | hypothetical protein HQ1500A 620734 - 619940 - | hypothetical protein HQ1501A 621113 - 621634 + | hypothetical protein TERM 291 622040 - 622062 + G 71 -2.6 -4.84359 | overlap 622042 GACCCAGTACAGTCT GACACTGGAG ACG CTCTTGTGTA TTTTTATCACCATAC HQ1502A 621893 - 622117 + | hypothetical protein srp19 622542 - 622823 + | signal recognition particle 19K protein gar1 622831 - 623064 + | H/ACA RNA-protein complex component Gar1 TERM 292 623908 - 623923 + G 70 -2.4 -4.86621 | overlap 623901 623900 AATGCCAACTGTCCT CGTCGC GAGT GCAGCG TTTTTCCTTCCAGGT HQ1505A 623141 - 624160 + | hypothetical protein TERM 293 624563 - 624593 + T 75 -3.2 -5.26119 | opp_overlap 624561, overlap 624565 624566 CCAGTTGAGAGGACT GCTATTGCTGCTTT TGA ATAGCAGCAACGTC TTTTATTTTTAGACA HQ1506A 625221 - 624724 - | hypothetical protein dapA 625894 - 626817 + | dihydrodipicolinate synthase dapB 626826 - 627749 + | dihydrodipicolinate reductase dapD 627749 - 628597 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase lysA 628594 - 629988 + | diaminopimelate decarboxylase dapF 629985 - 630977 + | diaminopimelate epimerase (DAP epimerase) TERM 294 631458 - 631476 + G 73 -8.8 -3.87994 | overlap 631459 631469 TGCTAAAGGTCCACT AGCAGCGA TGC TCGCTGCG TTTCTACGCGTCGAT TERM 295 631459 - 631475 + G 81 -12.3 -2.92475 | overlap 631458 631469 GCTAAAGGTCCACTA GCAGCGA TGC TCGCTGC GTTTCTACGCGTCGA dapE 631051 - 632262 + | succinyl-diaminopimelate desuccinylase rnp3 632376 - 633227 + | ribonuclease P protein component 3 HQ1514A 633211 - 633819 + | S-adenosylmethionine-dependent methyltransferase-like protein rnp2 633910 - 634443 + | ribonuclease P protein component 2 psmA1 634448 - 635200 + | proteasome subunit alpha HQ1517A 635911 - 635561 - | transcription regulator / transcriptional repressor CinR HQ1518A 637235 - 636387 - | hypothetical protein HQ1519A 637939 - 638184 + | hypothetical protein HQ1520A 639699 - 638311 - | electron-transferring-flavoprotein dehydrogenase TERM 296 638775 - 638765 - G 71 -6.8 -4.27617 | TACATTCCAGCAAAA GCTG CCC CAGC GATCCCACCACCTGT TERM 297 640682 - 640716 + r 80 -10 -3.91897 | opp_overlap 640688 640689 640692 CGTCCACGCATTGTC TGGAAACGTAGCGCGG ATG CCGTGCTCTGTTTCAA TTTCTGCATCAGGGA pmm3 641904 - 640873 - | phosphohexomutase 3 (phosphoglucomutase); phosphomannomutase) acyP 642053 - 642334 + | acylphosphatase TERM 298 642578 - 642561 - T 71 -10.5 -2.71684 | overlap 642551 642560 AATCAGCGAGAGAAT CCCACCG TTCA CGGCGGG CATGGGTGTCACTAC HQ1524A 643066 - 642614 - | hypothetical protein mvaD 643155 - 644129 + | diphosphomevalonate decarboxylase ndh 644167 - 645414 + | NADH dehydrogenase mgsA 645541 - 645984 + | methylglyoxal synthase HQ1528A 646207 - 646539 + | hypothetical protein HQ1529A 647343 - 646855 - | hypothetical protein TERM 299 647856 - 647836 - H 71 -10.4 -2.7317 | ATACATTGTGAAGTA CCTCGGGG TCAAG CCCCGAAG CTTCACCGTCTTGGG TERM 300 648455 - 648433 - H 83 -13.4 -3.12036 | overlap 648431 648439 ATATATTATTTAATA CCAGAACGCC TCC GGCGTTCAGG CGGAACAGCACGCAG TERM 301 649208 - 649188 - g 78 -9 -3.9693 | overlap 649191 GACTCACTGAAAGAA CAAGCGGA GGAAG TCCGCTCG GAAGCTTCTCAGCAT TERM 302 649205 - 649191 - g 71 -7.1 -4.10744 | overlap 649188 TCACTGAAAGAACAA GCGGA GGAAG TCCGC TCGGAAGCTTCTCAG TERM 303 649317 - 649335 + G 74 -3 -5.06414 | opp_overlap 649317 GATATTCGCGATGAA GCTGATGC TAT GCACGAGC TTTTTGTTGAGGCAC HQ1530A 648642 - 649565 + | hypothetical protein HQ1531A 649914 - 651023 + | hypothetical protein TERM 304 651221 - 651204 - T 74 -8.3 -3.84246 | opp_overlap 651201 651197 TGTTGAATCACTAAA CGGCGTG GATA CGCGCCG TCATACTGTGGTTTT TERM 305 652261 - 652238 - T 76 -5.2 -4.79174 | gap 1, opp_overlap 652239, overlap 652239 AGGGAACCAACAAAA GCCTCGGGTCA CCG CG-CCCGAGGT TGTTTACCTGCTCAA TERM 306 652239 - 652260 + T 77 -9.4 -3.97674 | opp_overlap 652239 652238 GGGAACCAACAAAAG CCTCGGGT CACCGC GCCCGAGG TTGTTTACCTGCTCA oxr 654095 - 653262 - | aldo/keto reductase family oxidoreductase TERM 307 654242 - 654252 + r 78 -5.4 -4.77165 | opp_overlap 654242 GGACAGGGCGAAGCA GCAA AAA TTGC TTTTATTGTCGGGAG HQ1534A 655990 - 654623 - | electron-transferring-flavoprotein dehydrogenase korB 657102 - 656239 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta korA 658895 - 657099 - | oxoglutarate--ferredoxin oxidoreductase, alpha subunit TERM 308 658442 - 658428 - G 76 -10 -3.64822 | ACCCTTCGATCCAAA GCGCTT CTC AAGCGC GCTATCAAGATTTTC HQ1537A 659150 - 659827 + | electron transfer protein acs 660093 - 662072 + | acyl-CoA synthetase I HQ1539A 664669 - 662270 - | substrate efflux/proton antiporter TERM 309 663020 - 662993 - G 77 -6.4 -4.52857 | gap 1, opp_overlap 662999 ATCGTCGACATAAAA TGAGAGCACGATC GTC GATGGTG-TCTCA TCCGGATCTCGCACA HQ1540A 666330 - 664675 - | hypothetical protein HQ1541A 666711 - 666448 - | ArsR family transcriptional regulator HQ1542A 669257 - 666792 - | substrate efflux/proton antiporter TERM 310 667665 - 667687 + g 74 -6.3 -4.38154 | opp_overlap 667668, overlap 667669 TTCTGCTGTTACAAA CGAGTCAGG TGGAT CCTGATTTG TTTTATGAAGGATCT TERM 311 667669 - 667683 + g 78 -5.7 -4.77173 | opp_overlap 667668, overlap 667665 GCTGTTACAAACGAG TCAGG TGGAT CCTGA TTTGTTTTATGAAGG HQ1543A 671029 - 669383 - | hypothetical protein TERM 312 671141 - 671163 + H 73 -10.6 -3.07895 | opp_overlap 671131 ATAAATGAGAGCCAT TCCTGCCACT CAC AGTGGTGGGA TCTCTTCCAAGTAAA TERM 313 671917 - 671928 + G 72 -5.8 -4.38141 | CGGTTGGTATTCAGC CACC ATCT GGTG TTCTTTTGTATGGAC pan2 671373 - 672590 + | proteasome-activating nucleotidase nthA 672656 - 673342 + | endonuclease III; DNA-(apurinic or apyrimidinic site) lyase HQ1546A 673914 - 673435 - | hypothetical protein HQ1547A 674041 - 675066 + | hypothetical protein TERM 314 675720 - 675697 - g 71 -8.9 -3.53563 | ATATCGCTGTTGAAA GCCAACCTG ATGCGG CAGATTGGC AAGGTCATGAGACAC hcpE 675339 - 676028 + | halocyanin hcpE HQ1549A 676031 - 676417 + | hypothetical protein TERM 315 676502 - 676471 - g 80 -6.7 -4.73388 | gap 1, opp_overlap 676479, overlap 676475 AAGCTGGATGAAAAA GAAAGACTTGACAC CGATC GAGTC-AGTCTTTC TGACAAGTCTCATCT TERM 316 676494 - 676475 - g 71 -2.8 -4.91852 | opp_overlap 676479, overlap 676471 TGGATGAAAAAGAAA GACTTGAC ACCG ATCGAGTC AGTCTTTCTGACAAG petB 676421 - 677227 + | menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b subunit TERM 317 677526 - 677539 + G 71 -4.5 -4.49958 | GAGATCATTCGCAAT CTTGC TATA GCGAG TTTCTTTACTGGGAT TERM 318 678019 - 678033 + G 70 -10 -3.14211 | opp_overlap 678021 CATACGACCTCAATC GACGGT ATT ACCGTC TTCGTCCACCAAAAT petD 677232 - 678050 + | menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b/c subunit TERM 319 678284 - 678270 - f 79 -2.1 -5.46706 | AGTTCAAAATAAAAA GCGAT TTTAC ATCAC TGCCCAATCAGTTAT HQ1552A 678497 - 678907 + | hypothetical protein HQ1553A 678900 - 679172 + | hypothetical protein HQ1554A 679558 - 680007 + | hypothetical protein HQ1555A 681477 - 680539 - | hydrolase TERM 320 680839 - 680851 + g 71 -6.3 -4.30441 | opp_overlap 680850, overlap 680850 TTCGTACTCCATCCA TGTCT CAG AGACA TTTTCAATGTTGTAG HQ1556A 681865 - 681608 - | hypothetical protein hcpF 681987 - 682517 + | halocyanin hcpF HQ1558A 683740 - 682679 - | hexosyltransferase; glycosyltransferase TERM 321 683177 - 683159 - G 93 -8.2 -5.07486 | GAGTGCTAACAAAAA TGAGTCAA TAT TCGACTCA TCATCAAGTCGGCGC TERM 322 683293 - 683307 + g 75 -5.7 -4.51197 | CGGTATCTCCGCCAA CTGAC CGGAC GTCAG TTTTGATTAATTGTG HQ1559A 684643 - 684008 - | hypothetical protein gldA 685925 - 684879 - | glycerol-1-phosphate dehydrogenase (NAD(P)) TERM 323 686022 - 686012 - R 80 -5.4 -4.92757 | TGATGAATAATAAAA TTGG AAT CCAA AACCAGCAAATATCA lysE 686905 - 686129 - | LysE family L-lysine efflux protein TERM 324 687151 - 687172 + r 71 -10.2 -2.6914 | opp_overlap 687155, overlap 687150 687153 TGTCAATTGACGTTA GACAGCTG CGGAGA CAGCTGTC GTTATCTCGGCGATA HQ1562A 687867 - 687148 - | hypothetical protein sirR 688811 - 687864 - | transcription regulator SirR thrC 690146 - 688932 - | threonine synthase crtI 690369 - 691649 + | phytoene dehydrogenase (phytoene desaturase) HQ1566A 692330 - 693103 + | short chain dehydrogenase/ reductase TERM 325 694074 - 694113 + T 76 -12.1 -2.57963 | gap 2, opp_overlap 694074, overlap 694096 694108 CCAGACTGTGAACTA CCCCGCCCT--GCTCGGCC TGAC GGCCTCGCTGAGGGCGGGG CTTCCTGCTTCTACG TERM 326 694113 - 694074 - T 76 -12.1 -2.72991 | gap 2, opp_overlap 694074 694096 694108 CCAGACTGTGAACTA CCCCGCCCT--GCTCGGCC TGAC GGCCTCGCTGAGGGCGGGG CTTCCTGCTTCTACG TERM 327 694096 - 694114 + T 77 -10.2 -3.30474 | opp_overlap 694074, overlap 694074 694108 CTGCTCGGCCTGACG GCCTCGCT GAG GGCGGGGC TTCCTGCTTCTACGA TERM 328 694231 - 694249 + T 90 -13.2 -3.53012 | opp_overlap 694235 CTCCACAGGCGTTGA CGAATCGC GGG GCGATTCG TTTGCACACCAGAAA TERM 329 694683 - 694694 + T 76 -4.4 -5.00467 | AATCACGTACAGTTG TCTG AATA CAGA TTTTGTTATTGTTGA HQ1567A 695494 - 694772 - | metallophosphoesterase TERM 330 695541 - 695559 + H 77 -10.2 -3.30474 | opp_overlap 695519, overlap 695553 GTGCTCGGCCTGACG GCCTCGCT GAG GGCGGGGC TTCCTGCTTCTACGA TERM 331 695818 - 695791 - H 75 -9.8 -3.62046 | opp_overlap 695781, overlap 695795 TCAGCCTCGCAAGAA GCGAGTCGTTCC GAAT GGAACGACGAGC GAATCGAAATCGACA TERM 332 695814 - 695795 - H 78 -12.2 -2.6563 | overlap 695791 CCTCGCAAGAAGCGA GTCGTTCC GAAT GGAACGAC GAGCGAATCGAAATC TERM 333 695971 - 695986 + H 72 -10.4 -2.84687 | CCTACTGCGCTCCTT GTCCGC TCGC GCGGAC TGTGGTGCTCCTTGA TERM 334 696637 - 696618 - g 73 -8.6 -3.96148 | gap 1, opp_overlap 696602 696618 696622, overlap 696598 GCGCTTGAGGATAAA CGAA-CCGC AAC GCGGTTTCG TATCCTCGTTGAAAT TERM 335 696622 - 696632 + G 73 -8.2 -3.87318 | opp_overlap 696598 696618, overlap 696602 696618 TTGAGGATAAACGAA CCGC AAC GCGG TTTCGTATCCTCGTT HQ1568A 696594 - 697430 + | transcription regulator dnaJ 698223 - 697576 - | chaperone protein DnaJ TERM 336 698285 - 698304 + H 88 -5.8 -5.47218 | TCAATATCCAGATGT TATACTCG TTTT TGAGTATA TTTTTTTCACTCGCA ppsA1 698369 - 700726 + | phosphoenolpyruvate synthase HQ1571A 701028 - 701600 + | hypothetical protein metG 701718 - 703943 + | methionyl-tRNA synthetase TERM 337 704063 - 704025 - g 71 -6.7 -4.24002 | gap 1, opp_overlap 704036 TGCGAAACGCTAAAA TCGTCTGTACGCTCGGAC CAGC GTCTGA-CGAACAGTCGA CAATTCGGGCTCTCG pykA 704009 - 705769 + | pyruvate kinase HQ1574A 706149 - 706415 + | hypothetical protein HQ1575A 706591 - 707298 + | hypothetical protein HQ1576A 708145 - 707459 - | hypothetical protein ctaB 709586 - 708147 - | protoheme IX farnesyltransferase coxB 709696 - 710439 + | cytochrome-c-like terminal oxidase, subunit II taqD 711000 - 710461 - | glycerol-3-phosphate cytidyltransferase-like protein HQ1580A 711668 - 710997 - | hypothetical protein TERM 338 712826 - 712841 + G 74 -2.6 -5.16071 | gap 1, opp_overlap 712826 GGGACGATCACGACA TGGACAG CGA CT-TCCA TTTTTATTGATGCTT HQ1581A 711852 - 713786 + | RecJ like exonuclease HQ1582A 714731 - 714024 - | nitroreductase family protein HQ1583A 717604 - 715829 - | phospholipase D TERM 339 716630 - 716647 + g 71 -8.3 -3.70811 | overlap 716644 TCCACGGCTATTTTT CCCGCCG GTTC CGGCTGG TTTCCAGTTCTCTGA TERM 340 717181 - 717192 + g 75 -5.8 -4.63932 | GAACGGGTATCTCAA CACG CTGG CGTG TTTTATTCGGCGCTG HQ1584A 719249 - 717918 - | homolog to phycocyanobilin lyase subunit fhuD 720222 - 719305 - | ABC-type Fe3+-hydroxamate transport system,substrate-binding protein dpsA 720356 - 720904 + | DNA-binding protein HQ1587A 721247 - 721065 - | hypothetical protein HQ1588A 721488 - 722498 + | hypothetical protein HQ1589A 722953 - 722522 - | hypothetical protein acaB 724104 - 722950 - | acetyl-CoA C-acyltransferase TERM 341 724380 - 724398 + G 79 -10.2 -3.75193 | opp_overlap 724379, overlap 724381 GCGTCTTGAATCCAT CGCGCCGA CGG TCGGCGCA TTTACCTGTCTCATT TERM 342 724381 - 724397 + G 85 -13.7 -2.84393 | opp_overlap 724379, overlap 724380 CGTCTTGAATCCATC GCGCCGA CGG TCGGCGC ATTTACCTGTCTCAT HQ1591A 724300 - 724779 + | hypothetical protein TERM 343 725041 - 725055 + T 72 -2.8 -4.9792 | overlap 725046 GTCGAAAGCTCCTTA TATCCG TCC CGCATA TTTTTGTGTGGACTA trxB 727042 - 725939 - | thioredoxin reductase (NADPH) HQ1593A 727742 - 727590 - | hypothetical protein HQ1594A 729386 - 727824 - | hypothetical protein lepW 730604 - 729450 - | signal peptidase I (SPase I) (leader peptidase I) HQ1596A 732539 - 730971 - | hemagglutinin like cellsurface protein HQ1597A 734536 - 733907 - | hypothetical protein HQ1598A 735901 - 734654 - | hypothetical protein HQ1599A 737113 - 737697 + | hypothetical protein HQ1600A 737694 - 738173 + | hypothetical protein HQ1601A 739029 - 738358 - | S-adenosylmethionine-dependent methyltransferase HQ1602A 739477 - 739821 + | hypothetical protein dph5 739870 - 740652 + | diphthine synthase HQ1604A 741668 - 740745 - | hypothetical protein glo 742508 - 741738 - | lyase/ dioxygenase ( lactoylglutathione lyase, aromatic compounds dioxygenase) HQ1606A 743259 - 742771 - | hypothetical protein drg 744410 - 743298 - | GTP-binding protein TERM 344 744271 - 744290 + g 90 -2.8 -5.8096 | CCATATCCGCCACCA CTCGAGGA CTGT TGTTCGAG TTTTTCTTTTTTCTC HQ1608A 744530 - 744730 + | hypothetical protein HQ1609A 745300 - 745665 + | cox cluster protein HQ1610A 745826 - 746227 + | cox cluster protein TERM 345 746394 - 746375 - f 78 -4.8 -4.99056 | opp_overlap 746380 746381, overlap 746376 GAATACAATGAAAAA TCCGCGTC TCCA GGCGCGGG AGAATGTTTGCTGTC TERM 346 747680 - 747714 + G 71 -6.4 -4.1673 | opp_overlap 747678 747680 747683 747685, overlap 747681 747689 TGTGGAATGGAAATA TCAGACTGACAACACC AAT GTTGTTTTCAGTCGGG TTTGTTGCAAACTTC coxA 746434 - 748338 + | cytochrome-c-like terminal oxidase, subunit I HQ1612A 749083 - 749517 + | cox cluster protein usp 749632 - 750036 + | homolog to stress response protein TERM 347 750124 - 750144 + T 87 -11.1 -3.87815 | AGCGAATGATATTTT CCGCGCC GTGAACG GGCGCGG TTTCTACCGGTGGAG trxA 751032 - 750271 - | thioredoxin livF 751907 - 751095 - | ABC-type branched-chain amino acid transport systems, ATP-binding protein II livG 752743 - 751904 - | ABC-type branched-chain amino acid transport systems, ATP-binding protein I livM 753894 - 752740 - | ABC-type branched-chain amino acid transport system, permease protein II livH 754892 - 753891 - | ABC-type branched-chain amino acid transport system, permease protein I livJ 756421 - 755021 - | ABC-type branched-chain amino acid transport systems, substrate-binding protein HQ1620A 756651 - 757403 + | protein N-acetyltransferase-like protein HQ1621A 758303 - 758779 + | hypothetical protein dsbG 759041 - 759793 + | protein-disulfide isomerase HQ1623A 759796 - 760407 + | hypothetical protein HQ1624A 761865 - 760876 - | methyltransferase tfbA 763260 - 762151 - | transcription initiation factor TFB TERM 348 763079 - 763095 + g 70 -9.5 -3.2115 | opp_overlap 763074 GGACAATGGACTGTC TCCTCAA CTG TTGAGGA TTCATCGCTAGTTTG btuD 764869 - 763505 - | corrinoid ABC transporter ATPase btuC 765903 - 764866 - | corrinoid ABC transporter permease TERM 349 765068 - 765056 - G 73 -7.7 -4.07618 | GGTCCAACAATCAAA CGCAT TGC ATGCG GGACGATGAGGCCGA hemT 765974 - 767266 + | ABC-type cobalamin/Iron(III)-siderophore transport systems, substrate-binding protein TERM 350 767488 - 767454 - f 77 -11.6 -2.87522 | gap 2, opp_overlap 767453 767452, overlap 767459 767462 CTAATTCATATGATA GTGAAGTACCTCGGGG TCAAG CCCCGAGG--CTTCAC CGTTTGGGGTCTGCA TERM 351 767482 - 767462 - f 84 -14 -2.77658 | opp_overlap 767453 767452, overlap 767459 767454 TATGATAGTGAAGTA CCTCGGGG TCAAG CCCCGAGG CTTCACCGTTTGGGG trxA 768031 - 768498 + | thioredoxin HQ1630A 768704 - 769327 + | hypothetical protein mer3 771443 - 769353 - | ATP-dependent DNA helicase TERM 352 769954 - 769965 + g 74 -3 -5.08824 | opp_overlap 769954 GTTGAATCTAATACA TCAA GCAC TTGA TTTTTTGAGTCAGCG TERM 353 770615 - 770627 + g 71 -4.8 -4.53303 | opp_overlap 770615 CTGCATCGGCAACGA GCGA AATCG TCGC TTTTGTGTCAGCATC aspC 772686 - 771538 - | aspartate aminotransferase ribE 773159 - 772683 - | riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase) HQ1634A 773348 - 775216 + | purK operon protein / membrane-bound mannosyltransferase purK 775312 - 776517 + | phosphoribosylaminoimidazole carboxylase carbon dioxide-fixation chain purE 776521 - 777177 + | phosphoribosylaminoimidazole carboxylase catalytic chain TERM 354 777530 - 777576 + G 71 -4.7 -4.53047 | AGATTCCAACTGGAT CAGCA-CGCGTTCAATTTAATAT CCA ATATTACA-TGATTGCGCTGCTG TTTCTTGTATTTGAT nuoA 777382 - 777795 + | NADH dehydrogenase, subunit A (ubiquinone) nuoB 777792 - 778496 + | NADH dehydrogenase, subunit B (ubiquinone) TERM 355 778597 - 778611 + G 74 -10 -3.53012 | CAGCGATGTCGTCAT TGGTCG AGA CGACCA TTTGAACGCACCAGG TERM 356 779028 - 779014 - g 77 -8.6 -4.2573 | CAAAGAATGGGAAAA TCCTCT TGC AGAGGA TCATCGTGAAGAAGA nuoCD 778493 - 780172 + | NADH dehydrogenase, subunit Cd (ubiquinone) TERM 357 781073 - 781089 + G 74 -3 -5.09762 | GATTCATCTGGTTTA CAATCA AAATC TGGTTG TTTTATTTCTTCACA nuoH 780172 - 781233 + | NADH dehydrogenase, subunit H (ubiquinone) nuoI 781230 - 781691 + | NADH dehydrogenase-like complex, subunit I TERM 358 781829 - 781810 - f 70 -5 -4.46073 | opp_overlap 781814 TTGCAATATAACAAA CGAACTGA GTTA TCAGTTTG CAGGCGCTAAGCCCC TERM 359 782557 - 782512 - f 70 -8.9 -3.45571 | gap 1, overlap 782513 782529 TCGTGGAAACAGGAA GCCCCACCCT-CACAGAAGCCA CGT TAGCGGCTGGGTAGGGTGGGGT GTGGGGTAGTTCACA TERM 360 782556 - 782513 - f 78 -12.4 -2.67021 | gap 1, overlap 782512 782529 CGTGGAAACAGGAAG CCCCACCCT-CACAGAAGCCA CGT TAGCGGCTGGGTAGGGTGGGG TGTGGGGTAGTTCAC nuoJ 782685 - 782945 + | NADH dehydrogenase subunit J TERM 361 783071 - 783053 - g 85 -12.4 -3.29144 | GCATCGTTCCCACAA CCGCAGGG ATT CCCTGCAG ATGCAAATATTACTG nuoJ2 782942 - 783301 + | NADH dehydrogenase-like complex, subunit J2 nuoK 783301 - 783603 + | NADH dehydrogenase, subunit K (ubiquinone) TERM 362 785464 - 785489 + G 100 -14.1 -4.01888 | opp_overlap 785463 785462, overlap 785452 CAAACTTGATCAAGG CGTCATTGACG GAGT CGTCAATGGCG TTTCTGGTGTAAGCT nuoL 783605 - 785629 + | NADH dehydrogenase, subunit L (ubiquinone) TERM 363 786773 - 786790 + G 75 -7.7 -4.2558 | GTATTGCGGACCGTA TGCCAGT TACT GCTGGCA TTTTCATCGCAGGTG nuoM 785626 - 787152 + | NADH dehydrogenase, subunit M (ubiquinone) TERM 364 788399 - 788414 + G 83 -9 -4.43208 | overlap 788392 CAGTCTTGCCGGACT TCCACC GTTC GGTGGA TTTGTTTCAAAATAT nuoN 787152 - 788696 + | NADH dehydrogenase, subunit N (ubiquinone) TERM 365 788685 - 788699 + F 73 -4.2 -4.87592 | overlap 788654 788680 CAAACCGTCGCAGCA GCGTTG TTC TAGCGC TTTTATTCTCTGTCC HQ1649A 789236 - 790708 + | phosphoesterase-like protein TERM 366 791062 - 791109 + F 74 -11.4 -2.87211 | opp_overlap 791073 GTATGTTTTTTAGTA CTGATTGACAATCGCCGTATCA TGAG TGAGAAGGCGACTGTCAATGAG TATATGACACAAGAT HQ1650A 791083 - 791865 + | CBS domain-containing protein HQ1651A 792202 - 791918 - | hypothetical protein trxB 793383 - 792316 - | thioredoxin reductase (NADPH) HQ1653A 793590 - 793877 + | hypothetical protein cysS 795527 - 794034 - | cysteine--tRNA ligase HQ1655A 796085 - 795555 - | hypothetical protein TERM 367 796471 - 796461 - H 72 -5.4 -4.43392 | GGAAAATCAAAATAA TCTC CAA GAGA ACCCGAAGTAAATAA cbiX 796513 - 797388 + | hypothetical protein TERM 368 797683 - 797671 - T 74 -3.3 -4.9725 | AGGTGCACATAAAAA CGATG TCC CAACG CGATATAGAGCTCTT HQ1658A 799286 - 798687 - | hypothetical protein HQ1659A 799602 - 799417 - | hypothetical protein purA 801031 - 799700 - | adenylosuccinate synthetase purNH 802831 - 801227 - | phosphoribosylglycinamide formyltransferase/ phosphoribosylaminoimidazolecarboxamide formyltransferase purB 803232 - 804656 + | adenylosuccinate lyase TERM 369 804876 - 804847 - g 75 -7.9 -4.18762 | gap 1, overlap 804867 804869 AATTTGTATTGAAAA GCCTCGACCTGA GCCAGAA CCAGG-CGAGGC GCTCATCCGAACGCT TERM 370 805571 - 805596 + G 79 -9.7 -3.93369 | opp_overlap 805563, overlap 805563 TTCAAAACGATTGAT GCACTAGCGCC AAAC GGTGTTGGTGC TTTGCTTGGAGTTCC gdh 804794 - 805873 + | glucose 1-dehydrogenase TERM 371 806457 - 806427 - g 73 -8.3 -3.85698 | gap 1, opp_overlap 806423 806418 806427 GTTGTTGTTGATAAA CAGGG-CGTCGATT CACT AGCCGACGTCCCTG TGTATTCACTTATTG pyrE 805860 - 806525 + | orotate phosphoribosyltransferase HQ1665A 806650 - 806997 + | glutaredoxin-like protein HQ1666A 807158 - 807727 + | hypothetical protein gckA 807945 - 809327 + | hydroxypyruvate reductase; glycerate kinase cysD 809355 - 810326 + | sulfate adenylyltransferase, small subunit HQ1669A 811402 - 812151 + | hypothetical protein graD 813131 - 812169 - | sugar nucleotidyltransferase ( glucose-1-phosphate thymidylyltransferase) HQ1671A 813235 - 813651 + | hypothetical protein apt 814227 - 813661 - | adenine phosphoribosyltransferase HQ1673A 814912 - 814484 - | hypothetical protein TERM 372 815260 - 815243 - g 80 -4.8 -5.06451 | opp_overlap 815243 CAGCAGCGGAAAAAA CGGCTG CAAACC CAACCG TCCATTTCGTGTATC TERM 373 815786 - 815800 + G 70 -10 -3.19389 | opp_overlap 815765 TTAATCTGTTAACTG GTGCAG TGA CTGCAC TTGCTGCGTCGATTG TERM 374 815933 - 815923 - g 71 -6.8 -4.24002 | opp_overlap 815916 TGGGAAATTGCAAAA GCGA ACC TCGC AATTGCGTATATCAT phaE 815122 - 816312 + | putative monovalent cation/H+ antiporter subunit E phaF 816312 - 816638 + | putative monovalent cation/H+ antiporter subunit F phaG 816640 - 816972 + | putative monovalent cation/H+ antiporter subunit G phaB1 816969 - 817514 + | putative monovalent cation/H+ antiporter subunit B TERM 375 817943 - 817955 + G 71 -4.8 -4.65747 | GCAATCGTCTCAGGC GTCC TCATC GGAC TTTTCTTCACACTTG phaB2 817511 - 818047 + | putative monovalent cation/H+ antiporter subunit B phaC 818044 - 818412 + | putative monovalent cation/H+ antiporter subunit C phaD 818405 - 819907 + | putative monovalent cation/H+ antiporter subunit D phaA 819907 - 822003 + | putative monovalent cation/H+ antiporter subunit D TERM 376 822474 - 822498 + G 71 -4.9 -4.6313 | ACGAGTATTGGCTCC GTGTTTGCCGG TGA TTGGCTAACGC TTGTTTTCTTTTGGG TERM 377 822853 - 822870 + G 73 -7.7 -3.98378 | ATGGTCTTGCCCGCG CGTTCCC TGAT GGGAATG TTCTTATTGCATATA TERM 378 823435 - 823458 + G 70 -2.4 -4.89521 | overlap 823428 823427 823437 823439 GTCAGCGTGTTGCAA TGCTTAGCGT CGCA ACGTTATGTA TTTTATTTGGGCTAT HQ1682A 822000 - 823916 + | putative monovalent cation/H+ antiporter subunit D dfp 825420 - 824263 - | phosphopantothenoylcysteine decarboxylase/ phosphopantothenate--cysteine ligase TERM 379 824917 - 824950 + g 85 -8.1 -4.72497 | AGTGCTCGCTACTGC GGTGATGATTGCGTC TTCT GTTGCAATCTTCGCC TTTTCTTCCTCGATA HQ1684A 825660 - 826202 + | hypothetical protein trkA 826465 - 827802 + | potassium transporter peripheral membrane component trkH 827966 - 829570 + | Trk-type potassium transport system, permease protein TrkH aatA 831038 - 829629 - | aspartyl-tRNA(Asn) amidotransferase subunit A aatC 831409 - 831041 - | aspartyl-tRNA(Asn) amidotransferase subunit C TERM 380 831682 - 831671 - H 73 -4.4 -4.90266 | GTCAGGAATCAAAAA CACT CGTG AGTG GCGTCTTGGCTGTCG tfbA 832265 - 833305 + | transcription initiation factor TFB HQ1690A 833584 - 834075 + | mut/nudix family protein asnB 835527 - 834232 - | asparagine synthase (glutamine-hydrolyzing) hisK 836214 - 835531 - | histidinol phosphatase TERM 381 837778 - 837810 + G 84 -12.7 -3.19889 | opp_overlap 837767 837777 837776 AGAATGCAACAAATG TCGCAGCAAAGGGAG CGA CTCCAATTGCTGCGG TTGACTGTCTTAATG TERM 382 838016 - 838004 - g 80 -4.1 -5.28176 | GGTAGGGACAAAAAA GACAT TTG ATGCC CCACCGGCAGCGCTC purL 836349 - 838526 + | phosphoribosylformylglycinamidine synthase, component II HQ1694A 838741 - 838574 - | hypothetical protein hisF 839061 - 839873 + | imidazoleglycerol-phosphate synthase chain hisF rpoL 840405 - 840115 - | DNA-directed RNA polymerase subunit L HQ1697A 841990 - 840947 - | metallo-beta-lactamase family protein / hydrolase TERM 383 842187 - 842166 - R 71 -10.1 -3.17051 | opp_overlap 842166, overlap 842164 TGTGCATGATCAAGA CGGAGACCT GTGT AGGACTCCG TTCATGACCAATTGA TERM 384 842166 - 842187 + r 71 -10.1 -3.15579 | opp_overlap 842166 842164 TGTGCATGATCAAGA CGGAGACCT GTGT AGGACTCCG TTCATGACCAATTGA HQ1698A 843123 - 842644 - | hypothetical protein alkK 844899 - 843283 - | long-chain-fatty-acid--CoA ligase TERM 385 844050 - 844064 + g 83 -10 -4.17048 | CGGTTGCTGCACGCA CTGGTG CAT CACCAG TTGTTTTCACACCAC mre11 845090 - 846646 + | DNA double-strand break repair protein mre11 rad50 846647 - 849343 + | chromosome segregation protein HQ1702A 849857 - 849423 - | hypothetical protein TERM 386 850509 - 850456 - R 86 -11.6 -3.53125 | gap 1, opp_overlap 850457 850506 850507, overlap 850450 850457 ACACAGAAACAGGAA GCCCTGTCCTCACCAAGCGAGGGGC GGGGA GCCCCAAGCGCGGTAAGG-CAGGGT AGTTCAGGAACTGCC TERM 387 850508 - 850457 - R 90 -15.1 -2.7079 | gap 1, opp_overlap 850457 850506 850507, overlap 850450 850456 CACAGAAACAGGAAG CCCTGTCCTCACCAAGCGAGGGGC GGGGA GCCCCAAGCGCGGTAAGG-CAGGG TAGTTCAGGAACTGC TERM 388 850457 - 850508 + r 71 -10.7 -2.71364 | gap 1, opp_overlap 850450 850457 850456, overlap 850506 850507 CACAGAAACAGGAAG CCCTGTCCTCACCAAGCGAGGGGC GGGGA GCCCCAAGCGCGGTAAGG-CAGGG TAGTTCAGGAACTGC HQ1703A 850998 - 850513 - | hypothetical protein HQ1704A 851340 - 851152 - | hypothetical protein TERM 389 851437 - 851475 + H 82 -11.1 -3.63627 | gap 2, opp_overlap 851419 851418 851447 CACTGGTCAGTTGAC CCGTGAAGTACCTCGGGGT CAA GCCCCGAGG--CTTCACCG TTTGGGGTCTGCACA TERM 390 851467 - 851447 - H 83 -14 -2.71731 | opp_overlap 851437 TTGACCCGTGAAGTA CCTCGGGG TCAAG CCCCGAGG CTTCACCGTTTGGGG TERM 391 855476 - 855449 - g 78 -5.5 -4.92385 | CAGATGGAAATAAAA CCGGTTACACA GACACA TGAGTATCCGG ACTATCAGGGGGATC TERM 392 856833 - 856812 - g 75 -5.1 -4.69487 | opp_overlap 856814, overlap 856814 AAACAGACAAAGAAA TCCTCACGC TTCA GCATGAGTA TGGTGAATCAACAAC polB1 852239 - 858667 + | family B DNA-directed DNA polymerase TERM 393 858796 - 858784 - f 72 -6.3 -4.31164 | opp_overlap 858784 CGCATACAACACAAA TCGAT ATT ATCGA TTATCTAGTACATAA TERM 394 859907 - 859893 - g 75 -5.6 -4.7657 | GAAAAATTGCAAAAA GTGGCG ATG CGTCAC TTGCACAACAACTCG sufC 859037 - 859972 + | ABC-type transport system involved in Fe-S cluster assembly, ATP-binding protein TERM 395 860115 - 860105 - g 71 -6.8 -4.1822 | TTTGACTTTAAGAAA GAGG AAT CCTC AGCGTTCAAAACTGA TERM 396 860223 - 860193 - g 75 -11.9 -2.55253 | gap 1 ACGAACCTGAATGGA TGCTCCAGCGC-CG ACTC CGTGCGCTTGAGCA ATTCAACGCGATGCC sufB 860042 - 861472 + | ABC-type transport system involved in Fe-S cluster assembly, permease protein I sufB 861475 - 862689 + | ABC-type transport system involved in Fe-S cluster assembly, permease protein II HQ1709A 862947 - 863492 + | hypothetical protein sirR 863489 - 863941 + | transcription regulator SirR HQ1711A 865503 - 864820 - | hypothetical protein HQ1712A 865795 - 866655 + | hypothetical protein HQ1713A 867834 - 866842 - | IS1341-type transposase TERM 397 867859 - 867889 + r 78 -4.7 -4.97159 | CCCGTCTTTGTCGAG GTACGAGGGTGGA CTAAC TTCAGCGTCGTAC TTGTTTTTTGTTTTT gltB 873034 - 868466 - | glutamate synthase large subunit TERM 398 871221 - 871255 + g 71 -8.7 -3.61902 | overlap 871223 GTTTTCTCACGCTCA TATGTGATGTCAACG ACTGC TGTTGACATCGCATC TTCTGTATCATCACC TERM 399 871223 - 871253 + g 78 -11.3 -3.38656 | overlap 871221 TTTCTCACGCTCATA TGTGATGTCAACG ACTGC TGTTGACATCGCA TCTTCTGTATCATCA TERM 400 871907 - 871883 - G 76 -11.5 -2.85351 | opp_overlap 871889 CGTTGTGACATCATA TCGACATGGAC GAA GTCCATTTCGA TCAAGAACTGCAGCG proS 874735 - 873197 - | prolyl-tRNA synthetase TERM 401 875539 - 875567 + H 83 -10.4 -3.70773 | gap 1, opp_overlap 875525 875538 AGTGACCCGACATAC CGT-CTGCTCACA ACAT TGTGGGCAGGACG TTCTTACCTATGAGC epf2 875577 - 877496 + | mRNA 3'-end processing factor-like protein TERM 402 877824 - 877836 + T 73 -10.5 -3.07816 | opp_overlap 877816 877819, overlap 877835 TAATTAACGACCTCA CCGCG TCA CGCGG TTCCCTCGGTGAGGG TERM 403 878049 - 878031 - T 71 -10.2 -2.64155 | overlap 878028 878027 GCCGTCGCAAAGCCA CGCCGGAC GTA GTCCGGAG ACAACGCTGTAGTCG TERM 404 878051 - 878070 + T 72 -5.6 -4.54727 | opp_overlap 878027 878054, overlap 878054 GACGTAGTCCGGAGA CAACGCTG TAGT CGGCGTAG TTTTGCTTTCCACAC TERM 405 878181 - 878195 + T 72 -2.8 -4.93318 | TGGATTCACCGTATC CACG AACACAC CGTG TTTTTCTGGCTTGTG HQ1717H 878974 - 878912 - | IS1341-type transposase (nonfunctional,N-terminal part) HQ1718A 879178 - 879399 + | hypothetical protein HQ1719A 879392 - 879790 + | hypothetical protein citE 879926 - 881233 + | citryl-CoA lyase glo 881684 - 881304 - | lactoylglutathione lyase hcpE 881859 - 882587 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase HQ1723A 883042 - 883353 + | hypothetical protein HQ1724A 884010 - 883528 - | transcription regulator TERM 406 884691 - 884711 + H 73 -11.1 -2.52464 | opp_overlap 884690 ATCATCCTCGAATAC CTCGACGGT ATC ACCGACGAG TACATTGGAAAGCAC tif1A2 885580 - 885831 + | translation initiation factor IF-1A HQ1728A 887516 - 886143 - | glycosyl transferase TERM 407 886926 - 886948 + g 95 -4.1 -5.83226 | CTCGAGACGGTTATC CAGATCAGG CTTGT CTTGTTCTG TTTTTTTCTTAAATT TERM 408 887435 - 887417 - G 71 -7.4 -4.0075 | ATGTAATCAACGAAA CTGCATGA GAA TCCTGCAG CGCATCGCAAACCGC adh 887833 - 889860 + | alcohol dehydrogenase (NADP+) pgsA 889857 - 890741 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase TERM 409 890874 - 890912 + T 77 -6.8 -4.45083 | gap 2, opp_overlap 890884, overlap 890875 890876 CATCTCACGTCTATA TTGTGAAGTACCTCGGGG ACAAG CCCCGAGG--CTTCACCG TTTTGTCCGTGTCGC TERM 410 890876 - 890910 + T 76 -11.6 -2.55459 | gap 2, opp_overlap 890884, overlap 890875 890874 TCTCACGTCTATATT GTGAAGTACCTCGGGG ACAAG CCCCGAGG--CTTCAC CGTTTTGTCCGTGTC TERM 411 890904 - 890884 - T 83 -14 -2.72991 | opp_overlap 890876 890875 890874 CTATATTGTGAAGTA CCTCGGGG ACAAG CCCCGAGG CTTCACCGTTTTGTC cdc6_ 892148 - 890964 - | cell division control protein cdc6-like protein HQ1732A 893312 - 892218 - | hypothetical protein TERM 412 893084 - 893119 + g 79 -11.2 -3.61517 | opp_overlap 893084 893080 893079, overlap 893085 CCGCACCAAATCCAA TCGTTCCTGTCACTGG TGCG CCAGTGATAGCAACGC TTGTTCCAGCAGCGT TERM 413 893085 - 893118 + g 90 -14.7 -2.76696 | opp_overlap 893084 893080 893079, overlap 893084 CGCACCAAATCCAAT CGTTCCTGTCACTGG TGCG CCAGTGATAGCAACG CTTGTTCCAGCAGCG glpK 894848 - 893316 - | glycerol kinase gpdA 895287 - 897026 + | glycerol-3-phosphate dehydrogenase chain A TERM 414 897341 - 897324 - g 76 -9.9 -3.67792 | CCATACGGACGCAAA TGCGTTG ATTC CAACGCA TGGTGGAACAATCAA gpdB 897010 - 898317 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 415 898852 - 898833 - g 75 -3.6 -5.08824 | gap 1 GGGTGATGGAAAAAA CTCT-CGGT GTC ACCAAAGAG CGTGAATTTCCTGCA glpC 898322 - 899701 + | sn-glycerol-3-phosphate dehydrogenase subunit C phoU 900449 - 899754 - | phosphate transport operon regulator HQ1738A 900876 - 901691 + | hypothetical protein TERM 416 906494 - 906476 - g 75 -11.8 -2.74701 | overlap 906473 906485 ATATGCTGAAGAGGA GCTATCAG ACG CTGATAGC AGCGATAGTAATGCT boa 902058 - 907475 + | bacterio-opsin activator-like transcription regulator HQ1740A 908604 - 908131 - | transcription regulator HQ1741A 909992 - 908769 - | FAD-dependent monooxygenase HQ1742A 910444 - 910827 + | transcription regulator TERM 417 911073 - 911049 - f 76 -9.2 -3.69094 | opp_overlap 911043 911042 AATGCAGGAGTGAAA TGCCTCAGGG TCAAG CCCCGTGGCA TTCGCCTTGTTCAAC TERM 418 911282 - 911256 - f 78 -12.3 -2.61106 | opp_overlap 911252, overlap 911245 911252 911260 CACATGCACAATGTA CATACGGCGGT TCAGT ACCGCCGAATG GTAAGTATAATTCCC TERM 419 911278 - 911260 - f 78 -11.7 -2.96711 | opp_overlap 911252, overlap 911256 911252 TGCACAATGTACATA CGGCGGT TCAGT ACCGCCG AATGGTAAGTATAAT ppk 911831 - 914086 + | polyphosphate kinase TERM 420 914987 - 914969 - g 71 -8.8 -3.70076 | overlap 914970 914981 TCAAACCGACCGAAA GCCAGCGT GAA ACGCTGGA CTACCACCGCGATAC TERM 421 914986 - 914970 - g 80 -12.3 -2.81564 | overlap 914969 914981 CAAACCGACCGAAAG CCAGCGT GAA ACGCTGG ACTACCACCGCGATA HQ1744C 914929 - 915123 + | IS1341-type transposase (nonfunctional,N-terminal part) TERM 422 915136 - 915117 - f 73 -4.3 -4.91109 | gap 1, overlap 915118 915119 TCCTGACCACAAAAA CTGGTGAG ACGCA CTCACC-G ACATCTACTCGAAGA TERM 423 916304 - 916265 - f 71 -10.7 -2.67021 | gap 2, opp_overlap 916262 916265, overlap 916264 CGTGGAAACAGGAAG CCCCACCCTCAGCGAGCGC GTCA GCGCGAGC--AGGGTGGGG TAGTTCACTCTGCCC TERM 424 916265 - 916304 + F 72 -10.7 -2.77182 | gap 2, opp_overlap 916265 916264, overlap 916262 CGTGGAAACAGGAAG CCCCACCCTCAGCGAGCGC GTCA GCGCGAGC--AGGGTGGGG TAGTTCACTCTGCCC HQ1746A 916434 - 916781 + | hypothetical protein HQ1747A 918176 - 917154 - | hypothetical protein TERM 425 918000 - 917984 - G 78 -12.3 -2.59569 | opp_overlap 917983, overlap 917983 917981 TCGCGAAATTAAGAG CGTCGTC GCC GACGACG TACACCTTATCATCC HQ1748A 919368 - 918346 - | hypothetical protein TERM 426 919661 - 919671 + r 72 -8.2 -3.75437 | overlap 919654 ACCCTGCTGTGCTTT GCGC TTT GCGC TTTGCTGCGGTACTT HQ1749A 920596 - 919733 - | hypothetical protein moxR 921552 - 920593 - | MoxR-like ATPase TERM 427 921126 - 921141 + g 75 -3.2 -5.13741 | GATCATATGTCTCAC CAGCTG CTGT CACCTG TTTTTCTTGCATTGC TERM 428 921259 - 921246 - G 77 -6.7 -4.56597 | opp_overlap 921256 GTCCGCGTTCAAAAA CGAAC TCGC GTTCG CCACCTGCTTCGCGA HQ1751A 923099 - 921912 - | hypothetical protein smc 923800 - 923189 - | chromosome partition protein TERM 429 923243 - 923258 + g 71 -4 -4.67038 | GGCTCGATCAACCCG TGATCT CAGG AGGTCA TTTTCGTTTTCAAGC HQ1753A 926196 - 923797 - | hypothetical protein HQ1754A 927992 - 926196 - | hypothetical protein TERM 430 926273 - 926308 + g 77 -10.4 -3.57971 | opp_overlap 926267 926264 GAACAACTATCCACC CGAGTGGACGAGGAAC CTGT GTCTCTCGTTCACGCG TTTGAGCGTCAATCT hadL 928797 - 928105 - | 2-haloalkanoic acid dehalogenase TERM 431 929073 - 929093 + r 87 -11.1 -3.85165 | AGTACCCCGAGTACG GTAGCGCGG AAC TCGCGCTGC TTTCCATTTAGCCTA metF 929968 - 929111 - | 5,10-methylenetetrahydrofolate reductase HQ1757A 931664 - 930150 - | hypothetical protein TERM 432 931543 - 931553 + g 73 -3.2 -4.93661 | GTCAACAGCTCAGCA TCTG CTT CGGA TTTTGTTGTTGATGT HQ1758A 932878 - 931742 - | deacylase HQ1759A 932976 - 933707 + | hypothetical protein TERM 433 934848 - 934871 + G 78 -11.1 -3.35679 | GTGACTCATATGGCA TTGGGTCGT ACAATC ACGACCCAA TTGTCCCTGACCCAC gcvT 933956 - 936553 + | aminomethyltransferase, glycin cleavage system T protein gcvT 936786 - 939344 + | aminomethyltransferase, glycin cleavage system T protein ilvA 939374 - 940660 + | threonine dehydratase TERM 434 940933 - 940912 - f 81 -13 -2.70932 | opp_overlap 940903 940915 940928 GCTGGGCGTGAAGTA CCACGGGC GCGGTG GCCCGTGG CTTCGCCGTGGTCTC TERM 435 941249 - 941297 + F 78 -6.6 -4.57516 | gap 2, opp_overlap 941236, overlap 941251 ATGGGACGCAGCCGA GC-GTACGAGCTTCAC-CCCCGCC CAC GGTGGGGCGGGGAACTCGCGCTGC TTTTCGTTTAGATGT TERM 436 941521 - 941547 + F 89 -4.4 -5.72622 | overlap 941508 941505 941525 GGTCGAGAGGACTCC TATCGCTGCTTT TGA ATAGCGGCAATA TTTTTTATTTCTCAG usp 941696 - 942169 + | stress response protein HQ1764A 942473 - 942303 - | hypothetical protein TERM 437 943360 - 943392 + G 83 -8.4 -4.61747 | overlap 943361 TTTCAGTGTCGCTGA ACCGATGTGGCACT TTGGT AGTTCCGCATCGGA TTTTATGGTTGTTCC TERM 438 943361 - 943391 + G 82 -11.9 -3.35963 | overlap 943360 TTCAGTGTCGCTGAA CCGATGTGGCACT TTGGT AGTTCCGCATCGG ATTTTATGGTTGTTC TERM 439 944038 - 944048 + G 83 -4 -5.45652 | GAAAGGCTGGATGGG TAGT TGG ACTA TTTTTTATTGGGGCT opuD 942941 - 944713 + | glycine betaine transport protein TERM 440 944824 - 944802 - T 73 -2 -5.1166 | opp_overlap 944802 944805, overlap 944804 TAGCAAAATGAAAAA TGTGTATGAA CGT TTCATACTGA TTAGTGCAAGTCTTT HQ1766A 946264 - 945731 - | hypothetical protein folCP 948788 - 946278 - | folylpolyglutamate synthase / dihydropteroate synthase fhs 948994 - 950736 + | formyltetrahydrofolate synthetase psp 951770 - 951390 - | ribonuclease, PSP-type gvpM 952222 - 952004 - | gas-vesicle operon protein gvpM gvpL 953242 - 952262 - | gas-vesicle operon protein gvpL gvpK 953767 - 953363 - | gas-vesicle operon protein gvpK gvpJ 954216 - 953770 - | gas-vesicle operon protein gvpJ gvpI 954559 - 954206 - | gas-vesicle operon protein gvpI TERM 441 954327 - 954344 + g 71 -6.9 -4.27519 | GTCGAGTGAGCGTTT CGAGCTG CGTT CTGCTCG TTTGTCTTCTGCGCT gvpH 955348 - 954683 - | gas-vesicle operon protein gvpH gvpG 955599 - 955348 - | gas-vesicle operon protein gvpG gvpF 956253 - 955603 - | gas-vesicle operon protein gvpF TERM 442 955795 - 955771 - G 72 -10.1 -2.94099 | GCGTTCGACGAGATA TGATCGATTCA AAA TGAGTCGATCA CTGAAGAGATCATCG parA 957459 - 956632 - | ParA domain-containing protein TERM 443 957387 - 957404 + g 70 -9.9 -3.17725 | overlap 957386 957384 CCGCCGCAAGCGCGC CAGCGAT ATTG ATCGCTG TGGTTGTTTTTCCAA gvpO 959610 - 959044 - | gas-vesicle operon protein gvpO gvpN 960711 - 959635 - | gas-vesicle operon protein gvpN gvpC 961862 - 960708 - | gas-vesicle protein gvpC gvpA 962167 - 961949 - | gas vesicle synthesis protein GvpA TERM 444 963008 - 962960 - R 70 -8.8 -3.30771 | overlap 962962 962963 962965 GCACATGGTCGAGAA TAGGAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCACCCGCA CCCGCACCCGCCTCA TERM 445 963005 - 962962 - R 74 -10.3 -3.22102 | gap 1, overlap 962960 962963 962965 ACATGGTCGAGAATA GGAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCAC-CC GCACCCGCACCCGCC TERM 446 963005 - 962963 - R 78 -12.7 -2.5294 | overlap 962962 962960 962965 CATGGTCGAGAATAG GAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCACCC GCACCCGCACCCGCC TERM 447 963003 - 962965 - R 77 -11.7 -2.80074 | overlap 962962 962963 962960 TGGTCGAGAATAGGA GTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCAC CCGCACCCGCACCCG trpG 963742 - 963173 - | anthranilate synthase component II trpE 965376 - 963739 - | anthranilate synthase, component I cysE 965594 - 966481 + | serine O-acetyltransferase TERM 448 968127 - 968117 - g 71 -6.8 -4.14392 | GTTGAAGCCGCAAAA GCAG CAG CTGC AGATGAATTCGTCTC HQ1786A 966608 - 968545 + | ABC-type transport system ATP-binding protein bat 969214 - 968567 - | bacterioopsin activator/sensor histidine kinase TERM 449 969395 - 969385 - g 74 -6.8 -4.31412 | opp_overlap 969384 AAAGACCGAGCAAAA CGAG ACG CTCG ATCTGATACTGCATT HQ1788A 969334 - 969960 + | hypothetical protein HQ1789A 970533 - 970165 - | hypothetical protein TERM 450 970588 - 970572 - H 76 -8.7 -4.06384 | GTCGAACATTAGAAA GACGGCA TGT TACCGTC GCTGCAGCCGCACGA HQ1790A 970802 - 970972 + | hypothetical protein HQ1791A 971073 - 971798 + | hypothetical protein HQ1792A 971858 - 972475 + | S-adenosylmethionine-dependent methyltransferase thiJ 973417 - 972704 - | chaperone TERM 451 974519 - 974531 + G 83 -4.7 -5.24416 | opp_overlap 974519 GGAGTCGCGGACATA CGCAC CCG GGGCG TTTTTGTTGTACTTA crtI 973545 - 975146 + | phytoene dehydrogenase (phytoene desaturase) tdk 975402 - 976079 + | thymidine kinase HQ1796A 976088 - 976690 + | hypothetical protein TERM 452 977022 - 977009 - g 76 -2.4 -5.26875 | TGTTCAAGTAAAAAA CGTT CGTGAT AACG GAAATATTGATCTTG HQ1797A 976776 - 979079 + | RecJ-like exonuclease hat 979438 - 981147 + | histone acetyltransferase-like protein HQ1799A 981843 - 981229 - | acetyltransferase HQ1800A 982733 - 981921 - | hypothetical protein TERM 453 983287 - 983306 + G 88 -11.4 -3.8186 | TATCGTGGAGTTATT CGGCGACG GAAA CGTCGCTG TTGTTGATTCGGCTG TERM 454 984223 - 984206 - g 79 -3.3 -5.31877 | overlap 984209 ATTGAGGAGAAAAAA GAGGGTG CACT CACCGCC ATTGAAAACACGCGT TERM 455 984518 - 984508 - g 71 -6.8 -4.2679 | TAATGCTGATCAAAA CGAG ACG CTCG TCAAAAAATATCTCA HQ1801A 982919 - 985078 + | hypothetical protein TERM 456 985367 - 985353 - g 74 -10 -3.57144 | TGCTCGATTTGCAAA CCGACT GCG AGTCGG TGGTGAGATTATCAG pelA 985114 - 986181 + | cell division protein pelota ocd 986543 - 986238 - | ornithine cyclodeaminase HQ1804A 986869 - 986603 - | hypothetical protein TERM 457 987093 - 987081 - H 76 -9.1 -3.80573 | overlap 987084 TGTATTACCAGTAAA CGACC ACG GGTCG GTGGTGCTCCTGAAA TERM 458 987747 - 987729 - g 71 -4.4 -4.66318 | overlap 987730 ATTATTCGAACAAAA TGGTCCAC ACG GTGGTCCC AAAGAAACAGCGATG cre 987274 - 988044 + | creatinine amidohydrolase dsbG 988976 - 988293 - | protein-disulfide isomerase TERM 459 989059 - 989081 + H 74 -10.5 -3.1855 | opp_overlap 989060, overlap 989067 GGTGACCCGTGAAGT ACCTCGGGG GCAAG CCCCGAGGC TTCCCTGTTGAGACC TERM 460 989080 - 989060 - H 83 -14 -2.71731 | opp_overlap 989059 989067 GTGACCCGTGAAGTA CCTCGGGG GCAAG CCCCGAGG CTTCCCTGTTGAGAC TERM 461 989868 - 989826 - H 70 -10.5 -2.5294 | overlap 989825 989823 989828 TATGGTCGAGAATAG GAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGCCCCACCC GCACCCGCACCCGCC HQ1807A 990226 - 990444 + | hypothetical protein HQ1808A 990480 - 990935 + | hypothetical protein HQ1809A 991782 - 991219 - | hypothetical protein TERM 462 991830 - 991819 - H 76 -4.4 -4.98522 | AACTGGATATAAAAA CGAT GGTT ATCG AATTGCACTTCTGAC TERM 463 991929 - 991918 - g 73 -2.2 -5.02287 | overlap 991919 GACAAAAAGACAAAA TCCC TTCC GAGA GCTTGAACGACTGTT hsp20 991901 - 992347 + | hsp20-type chaperone lrp 992938 - 993519 + | transcription regulator aspC 993516 - 994793 + | PLP-dependent aminotransferase ( aspartate aminotransferase ) HQ1813A 995376 - 996875 + | hypothetical protein salX 996872 - 997534 + | peptide ABC transporter ATP-binding protein TERM 464 998251 - 998237 - g 71 -8.6 -3.78022 | opp_overlap 998237 998236 GTGACAGTGAGGAAA TCCTGA GCA TCAGGA GTTTTGCAAGCACAC salY 997531 - 998691 + | peptide ABC transporter permease TERM 465 999466 - 999430 - g 78 -12.5 -2.62184 | gap 1, opp_overlap 999432 999456, overlap 999415 CTTCGGTCCAGATCA TGTCGCT-CAAGACCG AGGGAG CGATCTTGGAGCGACA CTCCGATTGAATCTT TERM 466 999792 - 999808 + G 73 -5.1 -4.4891 | GAAGTGGTGGATTTC CGCCA AGTGGTA TGGCG TTTTATGATGCTGAA HQ1816A 998795 - 1000060 + | glucose dehydrogenase, type B; L-sorbosone dehydrogenase TERM 467 1000395 - 1000364 - f 80 -7.3 -4.62069 | opp_overlap 1000356, overlap 1000365 TCTTTACCCGAAAAA GCGCTCCTGTG TTAGTTTCCC CACAGGAGCGG TGGTCGGTGGTTGGT TERM 468 1000394 - 1000365 - f 77 -10.8 -3.3692 | opp_overlap 1000356, overlap 1000364 CTTTACCCGAAAAAG CGCTCCTGTG TTAGTTTCCC CACAGGAGCG GTGGTCGGTGGTTGG HQ1816B 1000781 - 1001191 + | ISH9-type transposase (TCE34) (nonfunctional,N-terminal part) HQ1817A 1001980 - 1001621 - | hypothetical protein HQ1818A 1002980 - 1002351 - | hypothetical protein HQ1819A 1005195 - 1003198 - | hypothetical protein TERM 469 1006122 - 1006074 - H 75 -6.6 -4.54727 | gap 2, opp_overlap 1006105, overlap 1006077 CGCTCTAAACGAAAA GCAGCGCGAGTTCCCCGCCCCACC GTG GGCGGGG-GTGAAGCTCGTAC-GC TCGGCTGCGTCCCAT TERM 470 1006235 - 1006198 - H 71 -7 -4.07687 | gap 1, opp_overlap 1006198 1006221, overlap 1006223 ATCGGCCTCGCAAAA CCCGCGCACC-CATTTT GGGGT AAGACGCGGTGCGCCGG GTCTGTGTCGCGCCC TERM 471 1006460 - 1006437 - H 75 -9.5 -3.63336 | opp_overlap 1006438, overlap 1006427 1006438 AGAGACCACGGCAAA GCCACGGGC CACCGC GCCCGTGGT ACTTCACATGGGAAC TERM 472 1006459 - 1006438 - H 82 -13 -2.7752 | opp_overlap 1006438, overlap 1006427 1006437 GAGACCACGGCAAAG CCACGGGC CACCGC GCCCGTGG TACTTCACATGGGAA TERM 473 1006438 - 1006459 + H 81 -13 -2.73364 | opp_overlap 1006427 1006438 1006437 GAGACCACGGCAAAG CCACGGGC CACCGC GCCCGTGG TACTTCACATGGGAA HQ1820A 1006987 - 1007940 + | short chain dehydrogenase/ reductase HQ1821A 1007950 - 1009290 + | hypothetical protein HQ1822A 1011715 - 1010033 - | alkaline phosphatase; cell surface glycoprotein HQ1823A 1012002 - 1012199 + | hypothetical protein TERM 474 1012250 - 1012271 + T 77 -9.3 -3.96148 | overlap 1012251 1012252 GGGGTTGTCGGATTC ATCCCGCCG TGAA CGGCGGGGC TTTCTCCTCGCACCG TERM 475 1012251 - 1012270 + T 80 -12.8 -2.97475 | overlap 1012250 1012252 GGGTTGTCGGATTCA TCCCGCCG TGAA CGGCGGGG CTTTCTCCTCGCACC HQ1824A 1013780 - 1013196 - | hypothetical protein TERM 476 1013892 - 1013909 + r 72 -2.7 -5.02502 | GATTGATAACTTGCG GTAGACA CCTA TGTATAC TTTTTCTCTAGTATG HQ1825A 1015119 - 1014646 - | hypothetical protein TERM 477 1014970 - 1014997 + g 76 -9.2 -3.90112 | gap 1, opp_overlap 1014972 1014974 CCGTAACATGGTTAA CACACCAGCAGCG ACT CG-TGGTGGTGTG TTTCCTTCAGGAAGC HQ1826A 1015653 - 1015234 - | hypothetical protein HQ1827A 1016082 - 1015690 - | hypothetical protein cbs 1016232 - 1016783 + | CBS domain-containing protein cbiA 1018304 - 1016940 - | cobyrinic acid a,c-diamide synthase HQ1830A 1018645 - 1018301 - | cobalamin operon protein cbiG 1019616 - 1018642 - | cobalamin biosynthesis protein CbiG cbiF 1020496 - 1019609 - | precorrin-4 C11-methyltransferase cbiL 1021197 - 1020493 - | cobalt-precorrin-2 C(20)-methyltransferase cbiT 1021754 - 1021197 - | precorrin-8W decarboxylase cbiM 1021908 - 1022570 + | cobalt transport protein CbiM cbiN 1022567 - 1022863 + | CbiN protein ( ABC-type cobalt transport system, periplasmic component) cbiQ 1022847 - 1023578 + | CbiQ protein ( ABC-type cobalt transport system permease protein 1) TERM 478 1023798 - 1023814 + G 76 -7.3 -4.32857 | CGTCTATGCGCGCAA TCCGACA ACG TGTTGGA TTTATATTTCAACGA cbiO 1023575 - 1024303 + | CbiO protein ( ABC-type cobalt transport system ATP-binding protein) HQ1839A 1024583 - 1024822 + | hypothetical protein HQ1840A 1025055 - 1025852 + | short chain dehydrogenase/ reductase HQ1841A 1025940 - 1027130 + | major facilitator superfamily transporter TERM 479 1027678 - 1027640 - f 82 -11.1 -3.63627 | gap 2, opp_overlap 1027648, overlap 1027641 TGTGCAGACCCCAAA CGGTGAAG--CCTCGGGGC TTG ACCCCGAGGTACTTCACCT GGATAACCCGTGTAT TERM 480 1027677 - 1027641 - f 87 -14.6 -2.77962 | gap 2, opp_overlap 1027648, overlap 1027640 GTGCAGACCCCAAAC GGTGAAG--CCTCGGGGC TTG ACCCCGAGGTACTTCACC TGGATAACCCGTGTA TERM 481 1027648 - 1027668 + F 83 -14 -2.73681 | opp_overlap 1027641 1027640 CCCCAAACGGTGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACCTGGATA TERM 482 1028062 - 1028082 + F 71 -3.9 -4.85599 | overlap 1028064 GAATCTTCTTTCCAG TGCTTGGCG AAT CGGCGAGTA TTTTTATACCATACA folA 1028119 - 1028601 + | dihydrofolate reductase TERM 483 1029213 - 1029234 + G 71 -4.3 -4.8048 | opp_overlap 1029213 1029216, overlap 1029216 ATCATATGAGCGAAA CAGCGACCG TTGG CGGTGGATG TTTTTGGTGTACCGA msrA 1029203 - 1029727 + | methionine sulfoxide reductase A proA 1031263 - 1029884 - | glutamate-5-semialdehyde dehydrogenase proB 1032432 - 1031473 - | glutamate 5-kinase proC 1033201 - 1032425 - | pyrroline-5-carboxylate reductase HQ1847A 1033487 - 1034785 + | putative acetamidase/formamidase HQ1848A 1035267 - 1034884 - | hypothetical protein TERM 484 1035159 - 1035172 + g 73 -2.3 -5.03994 | overlap 1035147 CCTCAGAAATCGTAT TGCTG TTTG CTGCA TTTTTGTCTGTACCA HQ1849A 1035526 - 1036161 + | hypothetical protein norM 1036167 - 1037825 + | sodium-driven multidrug efflux pump HQ1851A 1040418 - 1037875 - | helicase HQ1852A 1042101 - 1040539 - | DNA repair and recombination protein radA HQ1853A 1042503 - 1042853 + | hypothetical protein HQ1854A 1042956 - 1044080 + | hypothetical protein degP 1044205 - 1045323 + | serine proteinase gcvT 1046916 - 1045492 - | aminomethyltransferase, glycin cleavage system T protein TERM 485 1047107 - 1047086 - R 70 -9.5 -2.94872 | opp_overlap 1047086 1047101, overlap 1047079 1047077 1047088 CTGAAATAGACGATA CACTCACAC TCTG ATGTGAGTG TCACTTCGATTCAAA HQ1858A 1047849 - 1047700 - | IS200-type transposase (nonfunctional,N-terminal part) TERM 486 1048416 - 1048383 - g 91 -12.5 -3.92324 | overlap 1048385 TTCTCGAAGACGAAA CAGTACGGTTCCGCA TCAG TGCGAAACCGTACAA CCATGTCAAAGGCGA TERM 487 1048414 - 1048385 - g 100 -17.3 -3.55084 | overlap 1048383 CTCGAAGACGAAACA GTACGGTTCCGCA TCAG TGCGAAACCGTAC AACCATGTCAAAGGC HQ1859A 1048040 - 1049350 + | IS1341-type transposase TERM 488 1049359 - 1049337 - f 100 -17 -3.6579 | opp_overlap 1049335 AATCCACGGGAAGAA GCTCCGGGGC TTG ACCCCGGAGC AGTTCACTGGGGAAT HQ1860A 1049381 - 1049512 + | hypothetical protein TERM 489 1049625 - 1049609 - T 71 -7.2 -4.06562 | opp_overlap 1049605 1049609, overlap 1049605 AAGTTCAAGGAGAAA GCCCCG CGCTT CAGGGC TGTCTCTTACCCACA HQ1861A 1050758 - 1050093 - | DNA binding protein, transcriptional regulator TERM 490 1052243 - 1052227 - g 74 -10.9 -3.00786 | overlap 1052219 1052229 TTGAAAATCCACAGA CAGTCGT TGA ACGACTG AATGCTGAGCATGAT nifS 1051242 - 1052381 + | cysteine desulfurase, class V aminotransferase HQ1863A 1053117 - 1052452 - | DNA binding protein, bacterio-opsin activator-like TERM 491 1054250 - 1054274 + G 71 -9.3 -3.45033 | overlap 1054237 GATTGCTGGTGCGCT TGCAACGGCGA TTG TCGCTGTTGGA TTCTGGTGGGTTGTG brp 1053417 - 1054427 + | bop gene expression regulator TERM 492 1054518 - 1054506 - T 73 -4.1 -4.91109 | overlap 1054507 TGGTGATTAGAAAAA CTTCG AGG CGAAA ACCCTGTTATTTAGC HQ1865A 1054897 - 1054592 - | hypothetical protein csp 1055014 - 1055208 + | cold shock protein tfbA 1056297 - 1055344 - | transcription initiation factor TFB TERM 493 1055907 - 1055922 + g 73 -3.2 -4.84492 | opp_overlap 1055909, overlap 1055909 GTGCAAACTGAAGAT TACGCT CACC AGCGTC TTTTGTTCTGATTCG TERM 494 1056527 - 1056508 - H 75 -11.4 -3.06087 | overlap 1056490 1056499 AATACAGGCGCAATA CCACGGCC TTCA GACCGTGG ATACGCGTCGTCGCA HQ1868A 1056801 - 1057475 + | RNA methylase HQ1869A 1059949 - 1058159 - | rhomboid family protein/intramembrane serine protease TERM 495 1058829 - 1058815 - G 79 -11.4 -3.13177 | ACAGGTTATATGGAA TCGCCG GTC CGGCGA GTGCAGCGGTCGTAA HQ1870A 1060261 - 1059983 - | hypothetical protein TERM 496 1060336 - 1060325 - R 72 -5.8 -4.4773 | opp_overlap 1060325 CCACACCAATTAAAA GACG TACT CGTC TTCGTGACCCATCAT HQ1871A 1060528 - 1060319 - | hypothetical protein TERM 497 1061881 - 1061870 - g 85 -3 -5.52986 | overlap 1061871 1061880 ACGCGATGAAAAAAA TGTT CATG AACA CGAACTTGTTGCTGA menF 1060848 - 1062572 + | isochorismate synthase TERM 498 1063409 - 1063395 - g 71 -8.6 -3.65046 | GGCTGACTCGAACAA CACCAA TTA TTGGTG GATACGATGGCTATC menD 1062572 - 1064431 + | 2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase TERM 499 1065297 - 1065281 - g 76 -8.7 -4.06055 | overlap 1065292 AGTGGGCAAATGAAA TGGCGAC AAA ATCGCCA ACAGCGATACGCATG menB 1064560 - 1065477 + | naphthoate synthase menA 1065619 - 1066578 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 500 1067041 - 1067031 - g 79 -2.4 -5.4492 | CAGACATATAAAAAA GCAG AAT CAGC AGTTGAAGATGGATA menC 1066578 - 1067681 + | O-succinylbenzoate-CoA synthase (OSB synthase; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase) HQ1877A 1068862 - 1068020 - | hypothetical protein TERM 501 1069356 - 1069336 - R 74 -5.4 -4.64676 | TCACGCTCAAGAAAA CCGATACA GCAGA TGTAGCGG CTGAGTAGCATGGAG pyrI 1070012 - 1069476 - | aspartate carbamoyltransferase regulatory subunit pyrB 1070923 - 1070009 - | aspartate carbamoyltransferase catalytic subunit gdhA 1072379 - 1071120 - | glutamate dehydrogenase (NADP+) fbp 1073434 - 1072493 - | fructose-1,6-bisphosphatase HQ1882A 1073681 - 1073986 + | hypothetical protein HQ1883A 1074656 - 1074198 - | hypothetical protein ubiA 1075640 - 1074780 - | prenyltransferase TERM 502 1075170 - 1075159 - G 72 -5.8 -4.39889 | ACAACGACACCAAAA TCGG TTAT CCGA CCAATCGCTGCGGCT TERM 503 1075972 - 1075954 - H 83 -10.2 -3.80573 | TTCAGGAGCACCAAA CGCGGAGG AAT CCTGCGCG TGAGCGTGAGCGTGA HQ1885A 1075972 - 1076463 + | hypothetical protein mtfK1 1076615 - 1077136 + | FKBP-type peptidylprolyl isomerase 1 HQ1887A 1078117 - 1078422 + | hypothetical protein TERM 504 1078964 - 1079009 + F 72 -8.9 -3.54408 | opp_overlap 1078974, overlap 1078961 CTTATTCAGAATTCG CAGTACGGAAGTCGGCTGTTT ATAA ATACTGCCGACCTCCTAACTG TTGATTTCAATCCGC kch 1079505 - 1080311 + | Kef-type K+ transporter NAD-binding component TERM 505 1080479 - 1080493 + T 73 -11.4 -2.56596 | overlap 1080473 1080475 1080489 CTGACTACCGCGCTC GGGGCT ATT AGCCCC TCGCTTGCTGAGGAC HQ1889A 1083001 - 1082006 - | hypothetical protein TERM 506 1083215 - 1083253 + H 71 -9.8 -3.1855 | overlap 1083201 GGAGATTCGCCCATC TCTCTGTTCCTACTTT AGAAATA AAAGTGAGAACAGAGA TTAGATATTCCCACG HQ1890A 1083470 - 1083907 + | hypothetical protein TERM 507 1085072 - 1085029 - T 74 -10.3 -3.22102 | gap 1, overlap 1085027 1085030 1085032 ACATGGTCGAGAATA GGAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCAC-CC GCCCCCGCCTCAGAC TERM 508 1085072 - 1085030 - T 78 -12.7 -2.5294 | overlap 1085029 1085027 1085032 CATGGTCGAGAATAG GAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCACCC GCCCCCGCCTCAGAC TERM 509 1085070 - 1085032 - T 77 -11.7 -2.80074 | overlap 1085029 1085030 1085027 TGGTCGAGAATAGGA GTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCAC CCGCCCCCGCCTCAG udp 1086585 - 1085776 - | uridine phosphorylase TERM 510 1088428 - 1088443 + H 74 -8.2 -3.95424 | opp_overlap 1088428 TCGTGGAAACAGGAA GCCTCG GGGT CGGGGC TTTGATCTTGATACT HQ1893A 1088988 - 1089332 + | hypothetical protein HQ1894A 1090358 - 1089657 - | hypothetical protein TERM 511 1089966 - 1089929 - G 83 -8.3 -4.57353 | overlap 1089931 CGGGATCACAGAAAA GCTCACCCACGCGGACA GCCG TGTACGCGAGGACGACC ACGAGCACCCGGTCC TERM 512 1090473 - 1090483 + r 70 -2.4 -5.01042 | overlap 1090471 GTAGTTCCCGCCCTC GCCG CCG CGAC TTTTTCCTTTCCCTT HQ1895A 1090826 - 1090563 - | hypothetical protein HQ1896A 1091320 - 1091087 - | hypothetical protein HQ1898A 1092494 - 1091958 - | hypothetical protein TERM 513 1092795 - 1092778 - R 75 -6.3 -4.39568 | gap 1, opp_overlap 1092786 ATCGATATACCAAAA CTGAG-CC GGC GGTCTCAG CTGAGTCCACTGTAC HQ1899A 1093440 - 1092871 - | hypothetical protein TERM 514 1093649 - 1093617 - R 93 -15.5 -3.05384 | opp_overlap 1093627 GTTCTGTCGAGCGAA CCGCCGAACGGCCTG GTA CCGGCTGTTCGACGG CTGTCCCATCGCGAC HQ1900A 1094296 - 1093697 - | hypothetical protein HQ1901A 1094597 - 1094346 - | hypothetical protein HQ1902A 1095133 - 1094699 - | hypothetical protein HQ1903A 1095821 - 1095126 - | hypothetical protein TERM 515 1095730 - 1095716 - G 71 -7.1 -4.07746 | opp_overlap 1095715, overlap 1095713 TTGTTAAAAAGAGAA CGACG TCGCT CGTCG CCTTGTGTTTGAATA HQ1904A 1096218 - 1095922 - | hypothetical protein TERM 516 1096359 - 1096388 + H 71 -10 -3.28791 | gap 1, overlap 1096363 AGGCGATCCAGTTAG CCGTCC-GCGGCT CCGAC AGCTGCCGGGCGG TTATCCGAACCCGGT HQ1905A 1097313 - 1098029 + | S-adenosylmethionine-dependent methyltransferase-like protein HQ1906A 1098899 - 1098414 - | hypothetical protein TERM 517 1098838 - 1098824 - G 74 -10 -3.54129 | opp_overlap 1098826 GATATGTTTTCGAAA CACCGA ACC TCGGTG GTTGCCGCCACCCGC TERM 518 1099008 - 1098998 - H 72 -3.2 -5.06816 | ATGTGCGAATAAAAA GTAG ACA CCAC GCTTAGGCCAGTCAA HQ1907A 1100085 - 1100411 + | hypothetical protein HQ1908A 1100565 - 1101188 + | hypothetical protein nuc 1102135 - 1101824 - | endonuclease staphylococcal nuclease-like TERM 519 1102414 - 1102437 + H 100 -15.3 -3.92996 | ATATCCAGGTGAATC GCCTCGGGG GTCAAG CCCCGAGGC TTCTTGTCTCTACGA TERM 520 1104817 - 1104784 - g 75 -6 -4.52589 | gap 2 GGCTGGGACATAAAA CTAACCGAGGCAACCG ATGG CGGC-GCC-CGGTTCG AAATTACTGGGGTCA HQ1910A 1103407 - 1104843 + | signal-transducing histidine kinase malA 1108309 - 1105961 - | alpha-glucosidase HQ1912A 1109096 - 1110115 + | hypothetical protein HQ1913A 1110425 - 1110129 - | hypothetical protein ski 1110791 - 1111543 + | two-component system sensor kinase HQ1915A 1111864 - 1112727 + | hypothetical protein TERM 521 1112856 - 1112873 + F 78 -4.8 -5.05113 | GGAAGTGCATTGACG GTCCGG AAACGA CTGGAC TTTTCTTTCTATCGA uspA 1113104 - 1113517 + | universal stress protein HQ1918A 1113999 - 1114769 + | hypothetical protein speE 1114894 - 1116723 + | spermidine synthase HQ1920A 1116726 - 1117247 + | hypothetical protein TERM 522 1117931 - 1117898 - g 70 -9.7 -3.1855 | TTGCTGAACAGGCAA GCACGATTGATGACA ATAC TATCTTCAATCATGC AATCTTTCATGATAT HQ1921A 1117285 - 1119456 + | hypothetical protein HQ1922A 1119512 - 1120477 + | hypothetical protein HQ1923A 1121024 - 1120548 - | hypothetical protein TERM 523 1121713 - 1121664 - R 70 -10 -2.96695 | gap 1, opp_overlap 1121664 1121663 TTGTCCAGCAAACTA CCCTACCCT-ACTTCGCTCACCC TATAT GGGTTCGCTCAGTGAGGGTAGGG CTTTGATATGGAGTC TERM 524 1122268 - 1122287 + r 79 -12.1 -3.14125 | overlap 1122266 GGAGCAGACCATTGT GCGCGGC CTGCGT GCCGCGC TGTTGCATCTCTCCA HQ1924E 1123025 - 1122957 - | IS1341-type transposase (nonfunctional,N-terminal part) TERM 525 1122978 - 1122995 + g 71 -9.1 -3.53091 | opp_overlap 1122989 GAGTGCGTCGCGTTG CTCGTCG GAAA CGGCGAG TTTCACGACGGCGGT TERM 526 1123546 - 1123585 + H 76 -12.1 -2.70932 | gap 2, opp_overlap 1123538 1123545 1123546 CGTAGAAGCAGGAAG CCCCGCCCT--GCTCGGCC TGAC GGCCTCGCTGAGGGCGGGG TAGTTCACGGAGCAC TERM 527 1123585 - 1123546 - H 76 -12.1 -2.57963 | gap 2, opp_overlap 1123546, overlap 1123538 1123545 CGTAGAAGCAGGAAG CCCCGCCCT--GCTCGGCC TGAC GGCCTCGCTGAGGGCGGGG TAGTTCACGGAGCAC HQ1925A 1123830 - 1124330 + | hypothetical protein HQ1926A 1124937 - 1126658 + | hypothetical protein HQ1927A 1127007 - 1127606 + | IS1341-type transposase (nonfunctional,N-terminal part) TERM 528 1127794 - 1127756 - T 71 -9.5 -3.29144 | GCAGGCCGCTCACAA CGCCTTGCTTCGGCTCG GGAAG CAAGAAGAAGCATGGCG AAAACAGTCCCTCCA TERM 529 1127980 - 1127960 - T 83 -14 -2.74012 | opp_overlap 1127951 1127950 TGAGTATGTGAAGTA CCTCGGGG TCAAG CCCCGAGG CTTCACCGTTTGGGG msrA 1129391 - 1128768 - | peptide methionine sulfoxide reductase (S-form specific) msrB 1129831 - 1129421 - | peptide methionine sulfoxide reductase (R-form specific) cutA 1130196 - 1129891 - | divalent divalent cation tolerance protein HQ1932A 1130847 - 1130419 - | light-and/or oxygen-sensing histidine kinase TERM 530 1130655 - 1130673 + g 73 -7.4 -4.23999 | CCTGCAACATCTTTG GAGTCTCT CCG AGAGCCTC TTCTTTTGAATATCC TERM 531 1130950 - 1130936 - R 70 -10 -3.11291 | opp_overlap 1130935 GTTACAATCCTAAGA CGAGTG TGT CACTCG ATAGTTCCGCATTAT HQ1933A 1133263 - 1131335 - | X-Pro dipeptidyl-peptidase TERM 532 1133544 - 1133530 - H 75 -11.4 -3.05384 | opp_overlap 1133517 1133530, overlap 1133516 TTCGTCTTCAGGGAA GCCGTC TCT GACGGC TGTGTAAGCGGGGCA TERM 533 1133530 - 1133544 + H 74 -11.4 -2.87132 | opp_overlap 1133516 1133530, overlap 1133517 TTCGTCTTCAGGGAA GCCGTC TCT GACGGC TGTGTAAGCGGGGCA xup 1133763 - 1135175 + | xanthine/uracil permease family protein HQ1935A 1135435 - 1135803 + | hypothetical protein TERM 534 1137126 - 1137138 + G 75 -7.7 -4.25104 | ATCATACAATGGAGC CTCGA TAT TCGAG TTTTCATGGACAAGA pyrC 1135856 - 1137280 + | dihydroorotase TERM 535 1137850 - 1137870 + G 73 -10.5 -3.19653 | GTAAAGCGATTCTTG CTTCACTTC CAC GAAGTGAGG TTAATGACATTATCG HQ1937A 1137420 - 1138175 + | transcription regulator HQ1938A 1139311 - 1138553 - | cyclase TERM 536 1139915 - 1139926 + G 74 -4.4 -4.89521 | overlap 1139909 GCCCCCGGTGACCGC GTAC TGTC GTAC TTTTATTTGACCTGT qor 1139657 - 1140706 + | NADPH:quinone reductase HQ1940A 1140779 - 1141978 + | crotonobetainyl-CoA:carnitine CoA-transferase/alpha-methylacyl-CoA racemase xdhC 1142156 - 1143316 + | xanthine and Co dehydrogenase maturation factor coxM 1143417 - 1144319 + | aerobic-type carbon monoxide dehydrogenase,medium subunit coxS 1144413 - 1144946 + | aerobic-type carbon monoxide dehydrogenase,small subunit coxL 1144946 - 1147417 + | aerobic-type carbon monoxide dehydrogenase,large subunit mobA 1148142 - 1147516 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 537 1148293 - 1148283 - H 79 -8.2 -4.2803 | GACGCTAAGCGAAAA GCCG TGT CGGC GACTAATTCTCATGA HQ1946A 1149104 - 1149937 + | response regulator / transcription regulator HQ1947A 1150487 - 1151200 + | hypothetical protein HQ1948A 1151756 - 1151454 - | hypothetical protein TERM 538 1151604 - 1151585 - G 71 -6.4 -4.21438 | overlap 1151586 CAGGTGAATAAATAA CCTCAGCA ATGG TGCTGAGT GTAACAAGCCCAAAG TERM 539 1151603 - 1151586 - G 70 -9.9 -3.1214 | overlap 1151585 AGGTGAATAAATAAC CTCAGCA ATGG TGCTGAG TGTAACAAGCCCAAA HQ1949A 1152136 - 1151753 - | ArsR family transcriptional regulator HQ1950A 1154031 - 1152667 - | amino acid transporter TERM 540 1152863 - 1152850 - G 77 -6.7 -4.58283 | CAATCCCCCGAAAAA TCCAG CAAA CTGGA CGTATGGATACCCTG TERM 541 1153910 - 1153920 + g 85 -4.6 -5.52384 | TAGGCGAGAATGACT GCTG GTC CGGC TTTTTTTAATCCCAA TERM 542 1154006 - 1154023 + g 71 -4.1 -4.82667 | opp_overlap 1154007, overlap 1154007 GTCGCATACAGACCA AGATCTC GTTC GAGATCG TTTTTCATCTGATAA trkA 1155225 - 1154515 - | Trk-type potassium transport system, NAD-binding subunit kch 1155669 - 1157312 + | Kef-type K+ transporter NAD-binding component HQ1953A 1157760 - 1157551 - | hypothetical protein mntH 1159270 - 1157924 - | manganese transporter NRAMP TERM 543 1158448 - 1158428 - G 85 -7.6 -4.73388 | opp_overlap 1158437, overlap 1158443 1158446 AAGCCCGATTAAAAA GACTCGTT GAGCG AACGAGCC AGCAATTGGTTCGAG TERM 544 1159380 - 1159361 - H 93 -15 -3.04792 | TGAGCAGGCGCAATA CCACGGCC TTCA GGCCGTGG ATACGCGCTGTCACG TERM 545 1159767 - 1159719 - H 70 -8.8 -3.30771 | overlap 1159721 1159722 1159724 GTATATGGTCGAGAA TAGGAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCACCCGCA CCCGTCTCAGACCGC TERM 546 1159764 - 1159721 - H 74 -10.3 -3.22102 | gap 1, overlap 1159719 1159722 1159724 ATATGGTCGAGAATA GGAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCAC-CC GCACCCGTCTCAGAC TERM 547 1159764 - 1159722 - H 78 -12.7 -2.5294 | overlap 1159721 1159719 1159724 TATGGTCGAGAATAG GAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCACCC GCACCCGTCTCAGAC TERM 548 1159762 - 1159724 - H 77 -11.7 -2.80074 | overlap 1159721 1159722 1159719 TGGTCGAGAATAGGA GTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCAC CCGCACCCGTCTCAG HQ1955A 1160042 - 1161856 + | sodium/anion symporter ( sulfate or citrate) trkA 1162124 - 1162777 + | Trk-type potassium transport system, NAD-binding subunit usp 1163297 - 1162851 - | stress response protein TERM 549 1164551 - 1164584 + G 71 -8.2 -3.75506 | gap 2, overlap 1164540 1164552 1164577 ATCCGTGGCGTGAAG CTCCCGC-CGGTC-GT TGAA ACAGACCGTGCGGGAA TTATTGCTGCATTCT TERM 550 1164552 - 1164583 + G 76 -11.7 -2.84581 | gap 2, overlap 1164540 1164551 1164577 TCCGTGGCGTGAAGC TCCCGC-CGGTC-GT TGAA ACAGACCGTGCGGGA ATTATTGCTGCATTC HQ1958A 1163444 - 1164793 + | hypothetical protein HQ1959A 1165397 - 1165684 + | hypothetical protein usp 1166767 - 1165886 - | stress response protein HQ1961A 1168370 - 1167018 - | CBS domain-containing protein TERM 551 1168052 - 1168036 - G 85 -7.3 -4.99035 | overlap 1168037 GCATCGAGATAAAAA CCGACAA TAG TTGTCGA AATAGAAGACATTGT HQ1962A 1168698 - 1169174 + | hypothetical protein HQ1963A 1169786 - 1169325 - | hypothetical protein TERM 552 1169790 - 1169803 + r 72 -3.1 -5.05782 | ACACAATCTCATCGT CGACA CGTT TGTTG TTTTTTACAATCAGT bcp 1170475 - 1170023 - | peroxiredoxin-like protein rtcB 1172178 - 1170733 - | RtcB-like protein TERM 553 1170948 - 1170965 + g 81 -11.3 -3.75933 | GACTCATTATTCGAC CAGCACC ATGT GGTGCTG TTTGATGAAATCTCT TERM 554 1172215 - 1172238 + r 86 -8.9 -4.48263 | opp_overlap 1172212 1172215 TGATATCTATAATTA CTCACCCAT GTGTAA ATGGGTGGG TTTTCGTATTATCTC HQ1966A 1173473 - 1172505 - | hypothetical protein HQ1968A 1174809 - 1174045 - | dehydrogenase TERM 555 1175790 - 1175770 - g 91 -6.8 -5.28561 | AAGAGACAAGAAAAA GCTCAGCG TCTCT CACCGAGC AACTTTCCTCAAGCA TERM 556 1175999 - 1176014 + G 71 -4.6 -4.57569 | TGCATTTTGGGTAAT CAACGG TCCA CCGCTG TTTTTCACCCAGTCA HQ1969A 1175121 - 1177025 + | ABC-type multidrug transport system, ATP-binding and permease protein TERM 557 1177883 - 1177864 - g 87 -10.8 -4.15577 | CGAAGAATGAAATAA GCCTTGAT GACT ATCAAGGC GAGAAATCAAAAAAT HQ1970A 1177308 - 1178162 + | site-specific DNA-methyltransferase HQ1971A 1179462 - 1178326 - | hypothetical protein aldH 1179797 - 1181335 + | aldehyde dehydrogenase sfsA 1183266 - 1182463 - | DNA-binding protein, stimulates sugar fermentation tauA 1183918 - 1184937 + | ABC-type nitrate/sulfonate/bicarbonate transport system, substrate binding protein tauC 1184944 - 1185768 + | ABC-type nitrate/sulfonate/bicarbonate transport system, permease protein tauB 1185765 - 1186514 + | ABC-type nitrate/sulfonate/bicarbonate transport system, ATP-binding protein tauC 1186589 - 1187260 + | ABC-type nitrate/sulfonate/bicarbonate transport system, permease protein HQ1978A 1188030 - 1187281 - | NCAIR mutase (PurE)-related protein pncB 1189212 - 1188040 - | nicotinate phosphoribosyltransferase HQ1980A 1190821 - 1189517 - | hypothetical protein rad3 1193773 - 1191077 - | DNA repair helicase Rad3 TERM 558 1195026 - 1194989 - H 70 -9.9 -3.05384 | gap 1, opp_overlap 1194979 TCTGTTTCGAGGGAA CTGTACTCGCTGCCCGAC GTA GTCG-ACAGCGAGTCCAC TGCCGACGAGTTCGA TERM 559 1195199 - 1195231 + H 100 -14.9 -4.68655 | opp_overlap 1195204, overlap 1195200 ACATTCTCCCGCTAC ACGAACGACCGCG ACTACCG CGCGGTCGTTCGC TTTCTTTTCGCGTTA TERM 560 1195200 - 1195230 + H 100 -18.4 -3.40108 | opp_overlap 1195204, overlap 1195199 CATTCTCCCGCTACA CGAACGACCGCG ACTACCG CGCGGTCGTTCG CTTTCTTTTCGCGTT TERM 561 1195226 - 1195204 - H 79 -12 -3.25823 | opp_overlap 1195200 1195199 CTCCCGCTACACGAA CGACCGCG ACTACCG CGCGGTCG TTCGCTTTCTTTTCG TERM 562 1195348 - 1195301 - H 100 -15.7 -3.57263 | gap 1, overlap 1195313 AGGCGGACTCGGAAA GCTTACACCGAACTTCGGGGGC GGTCA GCCCCCGAAGCTCGAT-CAGGC TGAACGACATGAGCT TERM 563 1195337 - 1195313 - H 100 -17.2 -3.13743 | overlap 1195301 AAAGCTTACACCGAA CTTCGGGGGC GGTCA GCCCCCGAAG CTCGATCAGGCTGAA TERM 564 1195590 - 1195532 - H 82 -11.8 -3.33492 | overlap 1195543 TGATCGACCCGAGAA TGCCGAAGAG-ATCCTCGACGAACGCGT CGAGT ACGCGTTCGACGAGGACGCTCA-CGACG ATCCACACAACAAAC TERM 565 1195579 - 1195543 - H 100 -21 -3.09135 | overlap 1195532 AGAATGCCGAAGAGA TCCTCGACGAACGCGT CGAGT ACGCGTTCGACGAGGA CGCTCACGACGATCC TERM 566 1195787 - 1195754 - H 77 -11 -3.12847 | opp_overlap 1195754 1195753, overlap 1195757 1195769 AAGCCGCATATTGAA CGACCGCTGGTGAA AGCTGA TACACCAGCGGCCA GATTTTACGCACTCA TERM 567 1195784 - 1195757 - H 74 -11.3 -2.77182 | opp_overlap 1195754 1195753, overlap 1195754 1195769 CCGCATATTGAACGA CCGCTGGTGAA AGCTGA TACACCAGCGG CCAGATTTTACGCAC HQ1983A 1195763 - 1196182 + | transposase TERM 568 1196283 - 1196303 + T 95 -14.7 -3.53012 | overlap 1196296 CATTCGCTTGGGTCA GCCGTCGCT TCC GGCGACGGC TTTGACCAGAACCGG TERM 569 1196296 - 1196332 + T 70 -9.5 -3.07443 | gap 1, overlap 1196283 CAGCCGTCGCTTCCG GCGACG-GCTTTGACC AGAACC GGTCGAAGCACGTCGA TTGACTCGGATATCA HQ1984A 1196851 - 1196522 - | hypothetical protein acaB 1198044 - 1196851 - | acetyl-CoA C-acyltransferase HQ1986A 1199752 - 1198547 - | major facilitator superfamily transporter TERM 570 1198635 - 1198624 - G 81 -5.8 -4.91459 | opp_overlap 1198624 CAAGAGCCAGAAAAA GCAC TCTC GTGC TCATATATGAAAGTG qor 1200829 - 1199849 - | NADPH:quinone reductase HQ1988A 1202689 - 1201277 - | crotonobetainyl-CoA:carnitine CoA-transferase/alpha-methylacyl-CoA racemase ugpC 1203887 - 1202700 - | ABC-type sugar/sn-glycerol-3-phosphate transport system, ATP-binding protein ugpE 1204940 - 1204041 - | ABC-type sugar/sn-glycerol-3-phosphate transport system, periplasmic protein TERM 571 1204547 - 1204557 + g 77 -4.6 -5.00616 | opp_overlap 1204538 1204536 AGAATAGCACTGACT GTGC CAA GCGC TTTTTTCCAGGGAAA ugpA 1205902 - 1204937 - | ABC-type sugar/sn-glycerol-3-phosphate transport system, periplasmic protein ugpB 1207401 - 1206028 - | ABC-type sugar/sn-glycerol-3-phosphate transport system, periplasmic protein TERM 572 1206930 - 1206952 + g 73 -10.6 -3.18134 | overlap 1206928 1206923 ACCAGTCCATCGTCA TGTTGACCCA GAT TGGGACAACA TATTGACTTCCTTGA HQ1993A 1208369 - 1207602 - | transcription regulator HQ1993B 1208862 - 1208933 + | ISH9-type transposase (nonfunctional, N-terminal part) TERM 573 1209122 - 1209073 - T 72 -10.7 -2.78032 | opp_overlap 1209074 1209075 1209083, overlap 1209072 1209070 TTGGGCTGAAAAGAT GGA-GCGGGTACGAGCCGCGCTC GTCTTA GAGCGCGGCGAGT-CCCGTGTCC CTTCAGCGCTCTGTA TERM 574 1209316 - 1209347 + T 100 -16 -3.12999 | gap 1, overlap 1209324 TCAAGTGACGTTCCT CGTCGATA-CCGCGC AGA GCGCGGTTATCGATG TTCACTGTAGCATGA TERM 575 1209324 - 1209338 + T 85 -12.8 -3.4277 | overlap 1209316 CGTTCCTCGTCGATA CCGCGC AGA GCGCGG TTATCGATGTTCACT HQ1994A 1211123 - 1210536 - | hypothetical protein HQ1995A 1211427 - 1211215 - | hypothetical protein HQ1996A 1212274 - 1213890 + | metal-dependent RNase HQ1997A 1214014 - 1214385 + | hypothetical protein dcd 1214439 - 1214855 + | deoxycytidine triphosphate deaminase HQ1999A 1214993 - 1215745 + | dehydrogenase TERM 576 1216377 - 1216367 - g 71 -6.8 -4.23213 | opp_overlap 1216365 1216367 CTTACATTTAAGAAA CCAG TGG CTGG TCTTGATACACATCG HQ2000A 1216019 - 1216474 + | hypothetical protein fdx 1217505 - 1217113 - | ferredoxin (2Fe-2S) TERM 577 1217768 - 1217790 + H 71 -10.6 -2.73123 | opp_overlap 1217767, overlap 1217773 CACATCTCAATCCAT GGGAGTCCAC GAA GTGGATTTCC TGATTGCACGCTTTT TERM 578 1217773 - 1217785 + H 71 -7.7 -3.84246 | opp_overlap 1217767, overlap 1217768 CTCAATCCATGGGAG TCCAC GAA GTGGA TTTCCTGATTGCACG HQ2002A 1218101 - 1218958 + | hypothetical protein HQ2003A 1219297 - 1219079 - | hypothetical protein TERM 579 1219665 - 1219677 + G 71 -9.1 -3.58343 | AGATAGAGATTGTCA GGCTG CGA CAGCC TTTGCCCGTGCTGCA nolA 1219396 - 1220328 + | NADH dehydrogenase 32K chain-like protein HQ2005A 1220325 - 1221065 + | hypothetical protein HQ2006A 1221863 - 1221156 - | S-adenosylmethionine-dependent methyltransferase TERM 580 1221495 - 1221514 + g 76 -10 -3.6682 | overlap 1221496 CGCAAGATATCCGTC TGGCTCGA CGAT TCGAGCCG TTTCAGTGAGTGCGG TERM 581 1221496 - 1221513 + g 74 -11.3 -2.79878 | overlap 1221495 GCAAGATATCCGTCT GGCTCGA CGAT TCGAGCC GTTTCAGTGAGTGCG moaA 1223583 - 1221865 - | molybdopterin-based tungsten cofactor biosynthesis protein TERM 582 1223718 - 1223751 + G 75 -10.3 -3.28912 | gap 1, overlap 1223719 CGGGAGTGCAACTTG TTTGTCCGAGCCGCAG ATG CTGCGGC-CGCACAGG TTGATGTCGATGTAG TERM 583 1223719 - 1223750 + G 75 -11.6 -2.57026 | gap 1, overlap 1223718 GGGAGTGCAACTTGT TTGTCCGAGCCGCAG ATG CTGCGGC-CGCACAG GTTGATGTCGATGTA HQ2008A 1223658 - 1223930 + | hypothetical protein bcp 1223961 - 1224473 + | thioredoxin-dependent hydroperoxide peroxidase uvsE 1225086 - 1225985 + | putative UV damage endonuclease HQ2012A 1227378 - 1227235 - | hypothetical protein HQ2013A 1227635 - 1227489 - | hypothetical protein TERM 584 1227553 - 1227532 - G 71 -7.1 -3.99806 | overlap 1227522 1227521 1227533 AGAATCGAGGAGAAA GCCTCGCGC TTCA GCGCGGGGA GGATGTCAAAGCGAG TERM 585 1227552 - 1227533 - G 72 -10.6 -2.99161 | overlap 1227522 1227521 1227532 GAATCGAGGAGAAAG CCTCGCGC TTCA GCGCGGGG AGGATGTCAAAGCGA ywaD 1229109 - 1227790 - | peptidase HQ2015A 1229220 - 1229744 + | tRNA splicing protein, cyclic phosphodiesterase HQ2016A 1230055 - 1229891 - | hypothetical protein HQ2017A 1230382 - 1231974 + | hypothetical protein salX 1231971 - 1232696 + | peptide ABC transporter ATP-binding protein salY 1232725 - 1233828 + | peptide ABC transporter permease HQ2020A 1235477 - 1234053 - | beta,beta-carotene 9',10'-dioxygenase 2 TERM 586 1234457 - 1234471 + g 79 -10 -3.80697 | TGAGTGGCGAGCGTT CAACGG ACC CCGTTG TTATATTAATTTGAT TERM 587 1235411 - 1235423 + g 71 -6.3 -4.27512 | ACGCAGGAACCGTCC CTTGA GTC TCAAG TTGTTTATTATCGAC TERM 588 1237666 - 1237636 - R 75 -9.7 -3.61715 | gap 1 TATCTTCGGGAATAA TTGGGCGGG-CGAC TGTC GACGTCCCACCCAA AAGCGTCTGTGCGGA uspA 1238204 - 1237785 - | universal stress protein TERM 589 1239286 - 1239263 - g 74 -3.8 -4.89567 | TTGCAAAAGATAAAA CCATGGGT ATGTTCGA ACCCAAGG CTGACGGCGTTAACA mntH 1238500 - 1239957 + | manganese transporter NRAMP ppsA2 1242057 - 1240690 - | pyruvate, water dikinase (phosphoenolpyruvate synthase) gapB 1243060 - 1242068 - | glyceraldehyde-3-phosphate dehydrogenase TERM 590 1242813 - 1242831 + g 74 -8.9 -3.77219 | CCAGGCGGCGTTGTG TCAGCGA CAATA TCGCTGA TTTCAATTAACTCGT TERM 591 1244615 - 1244585 - g 73 -8.2 -3.93369 | TCAACCGCAATCAAA CCATTGTGAGTGCA CTC CGCACTCACGCCGG ACTGGAAGCCACATA HQ2026A 1244425 - 1245138 + | phosphotransferase domain-containing protein HQ2027A 1245338 - 1247224 + | ATP/GTP-binding protein nudF 1247984 - 1247592 - | ADP-ribose pyrophosphatase cad 1248221 - 1248565 + | pterin-4a-carbinolamine dehydratase HQ2030A 1249546 - 1248719 - | ISH9-type transposase TERM 592 1248830 - 1248792 - G 100 -16.1 -3.14463 | gap 2, opp_overlap 1248796 AATTCGCCGTACCAA GATC--GCGCACGCACGGC GTC GCCGAGCGTGCGCTTGATC GTCGAGAAGACTGTC TERM 593 1248796 - 1248824 + g 100 -21.7 -3.21099 | opp_overlap 1248792 CGCCGTACCAAGATC GCGCACGCACGGC GTC GCCGAGCGTGCGC TTGATCGTCGAGAAG TERM 594 1248995 - 1249053 + g 100 -21.8 -2.8001 | gap 1, overlap 1248997 1249000 1249020 ATCGTAGCCTTTGTC CGCAGCGAGGCTGGTGAGGTCGCCCGC GTTGCG GCGGGCGACCT-GCCAGCCGAGTTGTG TGTCGTGACGCTTCT TERM 595 1248997 - 1249051 + g 100 -20.8 -2.94595 | gap 1, overlap 1248995 1249000 1249020 CGTAGCCTTTGTCCG CAGCGAGGCTGGTGAGGTCGCCCGC GTTGCG GCGGGCGACCT-GCCAGCCGAGTTG TGTGTCGTGACGCTT TERM 596 1249000 - 1249048 + g 100 -18.9 -3.61902 | gap 1, overlap 1248997 1248995 1249020 AGCCTTTGTCCGCAG CGAGGCTGGTGAGGTCGCCCGC GTTGCG GCGGGCGACCT-GCCAGCCGAG TTGTGTGTCGTGACG TERM 597 1249216 - 1249274 + g 70 -9.6 -3.24747 | gap 3, opp_overlap 1249196, overlap 1249218 1249221 1249253 CATCGATCACGGCGT GAC--CGCTCGGGT-CGTGCAGCTGCGCC GAGA GGCGCAGCAGCACTCGCCAGAGTGCTGTC TTGATCCTGTCAAAC TERM 598 1249218 - 1249270 + g 84 -12.6 -3.15407 | gap 1, opp_overlap 1249196, overlap 1249216 1249221 1249253 TCGATCACGGCGTGA CCGCTCGGGT-CGTGCAGCTGCGCC GAGA GGCGCAGCAGCACTCGCCAGAGTGC TGTCTTGATCCTGTC TERM 599 1249221 - 1249267 + g 95 -15.1 -2.77416 | gap 1, opp_overlap 1249196, overlap 1249218 1249216 1249253 ATCACGGCGTGACCG CTCGGGT-CGTGCAGCTGCGCC GAGA GGCGCAGCAGCACTCGCCAGAG TGCTGTCTTGATCCT TERM 600 1249253 - 1249272 + g 82 -12.2 -3.18849 | overlap 1249221 1249218 1249216 CGCCGAGAGGCGCAG CAGCACTC GCCA GAGTGCTG TCTTGATCCTGTCAA TERM 601 1249488 - 1249434 - G 100 -16.2 -2.8655 | TGGAGTGATACGACA GCGTAGTCGGCGAAGCCGCCACCCCC TTC GGGGGCGGCGACTTCGCCTCGGTCAC CAACAGCATTTTTAG TERM 602 1249529 - 1249566 + g 73 -9.9 -3.36557 | opp_overlap 1249513 1249548 CGCTTTCTTCGTGAA GCGGGAGATCTTCGA CATAGACA TCGGCGATTTCCCGC TTCATTCCACTAGTT TERM 603 1250140 - 1250121 - R 93 -12.8 -3.76224 | CTCCCACGGAGGAAA CCGCGCCG TTCA CAGCGCGG AGGATGTCATGCTCT amyA 1252466 - 1250232 - | alpha amylase TERM 604 1250487 - 1250513 + g 73 -5.1 -4.54727 | CACGTCCGTGGGTGT CTCACTCCGGT GAGCG ACTCGGGTGAG TTTTGATTTCACCCC xseAs 1253032 - 1252820 - | exonuclease VII small subunit xseAl 1254207 - 1253029 - | exodeoxyribonuclease VII large subunit HQ2034A 1254523 - 1255539 + | hypothetical protein HQ2035A 1255536 - 1256579 + | mandelate racemase/muconate lactonizing enzyme family protein elaC 1257198 - 1258112 + | ribonuclease Z (RNase Z) (tRNA 3 endonuclease) HQ2037A 1260148 - 1258376 - | hypothetical protein cysA 1261323 - 1260394 - | thiosulfate sulfurtransferase HQ2039A 1261828 - 1261454 - | hypothetical protein sppA 1262884 - 1261925 - | signal peptide peptidase cinA 1264711 - 1265466 + | CinA-like domain-containing protein HQ2044A 1265675 - 1266610 + | hypothetical protein HQ2045A 1267538 - 1266813 - | phosphoesterase cynT 1268441 - 1267848 - | carbonic anhydrase TERM 605 1268573 - 1268561 - R 89 -9.1 -4.55491 | CAGCGAAGCATAAAA CGGTG ACA CACCG ATGCTGAACCGTATT trzA 1268912 - 1268610 - | Atrazine chlorohydrolase trzA 1269140 - 1268958 - | N-ethylammeline chlorohydrolase (S-triazine hydrolase ) guaD 1269425 - 1270759 + | N-ethylammeline chlorohydrolase apt 1270976 - 1271521 + | adenine phosphoribosyltransferase TERM 606 1272165 - 1272143 - f 82 -11.3 -3.57161 | gap 1, overlap 1272145 AAATAGCAAGGAGAA TACCCGCGCC TTTA GGCGCGGG-A TGAATCCAACAACTC TERM 607 1272164 - 1272145 - f 100 -16.4 -3.34806 | overlap 1272143 ATAGCAAGGAGAATA CCCGCGCC TTTA GGCGCGGG ATGAATCCAACAACT HQ2051A 1272280 - 1273605 + | IS1341-type transposase pitA 1274932 - 1273688 - | phosphate permease-like protein TERM 608 1275036 - 1275054 + r 76 -4.6 -4.93661 | opp_overlap 1275036 1275040, overlap 1275037 CACCTTATTCAGACA GCAATACT GAT AGTATTGG TTTTATTATTCGTAT HQ2053A 1276229 - 1275420 - | signal-transducing histidine kinase/response regulator HQ2054A 1277155 - 1276307 - | signal-transducing histidine kinase TERM 609 1276871 - 1276893 + g 71 -10.4 -2.87468 | GGCCATCCACCGCGA CCGGACGAGG GAT CCACGACCGG TGTACTCTAATGCGA TERM 610 1277497 - 1277478 - H 73 -7.8 -4.03234 | GGGTTCGGATAGAAA CGCTGGTC ATAT GACCATCG ACTGGTAAGAAAGCA HQ2055A 1277657 - 1278019 + | hypothetical protein HQ2056A 1279161 - 1279676 + | hypothetical protein TERM 611 1280064 - 1280045 - T 72 -9.2 -3.50492 | TAGCACAGAGGAGAA CGATGGCG GTTC CGCCAGCG AGTATCGACTTCTCC TERM 612 1280939 - 1280960 + T 100 -9.5 -5.15381 | ATCATTCAGAGAGCC CAGTTGCTG AGTA CAGCAATTG TTTTTTGAGTGTCTT HQ2057A 1281415 - 1281026 - | hypothetical protein HQ2058A 1281749 - 1282339 + | hypothetical protein TERM 613 1283017 - 1283036 + G 74 -6.4 -4.31835 | gap 1, overlap 1283019 TTCGTTGGAATCTTA GCCTGCTTG CTG CGAGC-GGC TTTCTTCTCCCGGTT HQ2059A 1282509 - 1283123 + | hypothetical protein TERM 614 1283301 - 1283334 + F 70 -9.7 -2.99471 | overlap 1283303 1283307 GACATTATCACACCT GAGATAGATTCGACT GCCC AGTCCAGTCTGTCTC TATCTCTCAGAATAC HQ2060A 1283490 - 1283768 + | hypothetical protein HQ2061A 1284249 - 1284055 - | hypothetical protein ldcA 1284970 - 1284236 - | LD-carboxypeptidase HQ2063A 1285135 - 1284995 - | hypothetical protein rhtB 1286098 - 1285457 - | threonine/homoserine/homoserine lactone efflux protein HQ2065A 1286713 - 1286435 - | hypothetical protein TERM 615 1287664 - 1287676 + G 71 -9.1 -3.56643 | GGATGCCGGTCGATA CGCTG ACA CAGCG TTTGGAAGGTGTCGA serA 1287546 - 1288610 + | phosphoglycerate dehydrogenase HQ2067A 1289241 - 1288822 - | hypothetical protein HQ2068A 1289698 - 1290324 + | hypothetical protein HQ2069A 1290364 - 1290720 + | hypothetical protein HQ2070A 1290858 - 1291109 + | hypothetical protein HQ2071A 1291639 - 1291268 - | hypothetical protein HQ2072A 1293118 - 1291769 - | IS1341-type transposase TERM 616 1292213 - 1292230 + g 75 -7.7 -4.20042 | gap 1 CTCGCCAGTCTCATC CTCGC-GG ACA CCAGCGAG TTTTCCGATGTTGAT TERM 617 1293515 - 1293531 + H 71 -7.2 -4.02456 | opp_overlap 1293511 1293515, overlap 1293508 1293524 TGTGGGTAAGAGACA GCCCTG AAGCG CGGGGC TTTCTCCTCGTATTT HQ2073A 1294080 - 1294406 + | hypothetical protein HQ2074A 1295067 - 1294597 - | hypothetical protein rad 1297064 - 1295061 - | ATPase invovled in DNA repair TERM 618 1296740 - 1296752 + g 73 -5.5 -4.58283 | GCACTCCAGAGAGGT CGGTC TGT GATCG TTTTTGAAACACTTG HQ2076A 1297231 - 1297064 - | hypothetical protein HQ2077A 1300507 - 1297541 - | site-specific DNA-methyltransferase HQ2078A 1300720 - 1302270 + | site-specific DNA-methyltransferase TERM 619 1303189 - 1303163 - g 100 -9.4 -4.66833 | CTGGAACCGGAAAAA CATACACCGCCC TCG GGGCAATGGATG AATTGAATCAGATAA TERM 620 1304134 - 1304112 - g 70 -7.7 -3.82084 | GTCTAATAGTAAGAA TCCGATGGA ATTTG TCCAGCGGA GAGGTCGGGTACTTC HQ2079A 1302340 - 1304355 + | DNA repair helicase TERM 621 1304693 - 1304681 - g 100 -4.9 -5.7946 | TTGGTAATAAAAAAA TCAAT GTA ATTGA AGGACAAAATGGAGC smc 1304491 - 1306554 + | chromosome segregation protein TERM 622 1306720 - 1306734 + G 83 -6.4 -4.8622 | GGACTGCGTTAGATG GGGCAT CAC ATGCTC TTTTTAATTGGGAGA HQ2081A 1306551 - 1306961 + | hypothetical protein HQ2082A 1306980 - 1308080 + | hypothetical protein HQ2083A 1308202 - 1309218 + | haloviral protein TERM 623 1309452 - 1309432 - T 93 -14 -3.53012 | opp_overlap 1309404 1309403, overlap 1309403 CCGGTTCTGGTCAAA GCCGTCGC TTTCG GCGACGGC TGATCCGACCGAATG TERM 624 1309842 - 1309872 + T 86 -14.9 -2.72152 | gap 1, opp_overlap 1309838, overlap 1309839 1309839 TATATCAATAGGTTC GTACGCTGACGACG CCAA CGTCGTCAG-GTAC TCAATTTCTCATCCA HQ2084A 1310237 - 1309908 - | hypothetical protein TERM 625 1310152 - 1310120 - G 74 -10 -3.56251 | gap 1, opp_overlap 1310119 1310121 1310149, overlap 1310121 1310124 CAAATACCCAGATAA TTGA-GTCGAGGTCT GCAA AGACCTCGACATCAT CTTTGAGATGATTAA TERM 626 1310151 - 1310121 - G 84 -13.5 -2.73028 | gap 1, opp_overlap 1310121 1310119 1310149, overlap 1310120 1310124 AAATACCCAGATAAT TGA-GTCGAGGTCT GCAA AGACCTCGACATCA TCTTTGAGATGATTA TERM 627 1310121 - 1310151 + g 91 -13.5 -3.39732 | gap 1, opp_overlap 1310120 1310121 1310124, overlap 1310119 1310149 AAATACCCAGATAAT TGA-GTCGAGGTCT GCAA AGACCTCGACATCA TCTTTGAGATGATTA TERM 628 1310147 - 1310124 - G 95 -15.4 -2.63555 | opp_overlap 1310121 1310119, overlap 1310121 1310120 TACCCAGATAATTGA GTCGAGGTCT GCAA AGACCTCGAC ATCATCTTTGAGATG HQ2085A 1310789 - 1310427 - | hypothetical protein TERM 629 1310489 - 1310457 - G 77 -6.9 -4.64861 | opp_overlap 1310462 1310463 1310465, overlap 1310458 TGCTTCGAAAAGAAA GCGACCGACCGCG ACTACCG CGCGGTCATTCGT GTAGCGAGAAAATGT TERM 630 1310488 - 1310458 - G 75 -10.4 -3.38435 | opp_overlap 1310462 1310463 1310465, overlap 1310457 GCTTCGAAAAGAAAG CGACCGACCGCG ACTACCG CGCGGTCATTCG TGTAGCGAGAAAATG TERM 631 1310694 - 1310667 - G 91 -15 -3.07895 | gap 1, opp_overlap 1310663, overlap 1310652 TTCATCGGCAATAGA CTCGCTG-TCGAC TGC GTCGAGCAGCGAG TACAATTCCCTCAAA TERM 632 1310803 - 1310816 + r 83 -9.5 -4.11216 | ATCAGGCCGTCACTA CCGGC TCAC GCCGG TTTTAAAACTCGAAA HQ2086A 1312819 - 1310987 - | hypothetical protein TERM 633 1311106 - 1311095 - G 72 -5.8 -4.42464 | overlap 1311098 AATGTTCGAAAGAAA GAGG CAAT CCTC GCACGAGCCATTGTG TERM 634 1311147 - 1311159 + g 75 -7.7 -4.21319 | opp_overlap 1311146 CAGACGGAATCATAC GTGCA AAA TGCAC TTTCTTCCAATTGAT HQ2087A 1316328 - 1312816 - | helicase family protein TERM 635 1315029 - 1315019 - G 71 -8.2 -3.727 | overlap 1315020 TTCATTAGACGGAAA GCGC GAA GCGC CTGACTATCCTGTTT HQ2088A 1318489 - 1316321 - | hypothetical protein HQ2089A 1319744 - 1319217 - | hypothetical protein HQ2090A 1319775 - 1320164 + | hypothetical protein HQ2091A 1320228 - 1320815 + | hypothetical protein HQ2092A 1321023 - 1321253 + | hypothetical protein HQ2093A 1321270 - 1321764 + | hypothetical protein HQ2094A 1322631 - 1322014 - | hypothetical protein TERM 636 1322687 - 1322638 - R 82 -7.9 -4.61199 | gap 1, overlap 1322640 AGTGGACATACAAAA CGCCTACT-CGCAACGACGTATCA ATC TGGCTCGTCGTTGCACAGTAAGAG AACCGATCTGTATCG HQ2095A 1323477 - 1322887 - | hypothetical protein TERM 637 1323145 - 1323121 - G 75 -3.4 -5.01845 | CAGAAGAATCAAAAA GCCGGCAGCG AACCA CGATGCGAGC GGCCCAGTCGTCTCA uraA 1325913 - 1324537 - | xanthine/uracil permeases TERM 638 1326493 - 1326524 + G 73 -10.2 -3.14683 | opp_overlap 1326502, overlap 1326502 ATCCACTGTTTGTTA TCCTCGAAACCGGA TGGG TCCTGTTTGGAGGA TTACTGCGGAACTAT TERM 639 1326852 - 1326837 - g 74 -9 -3.68569 | opp_overlap 1326837 GCACCGATGGAAGAA CTCCTC TACC GAGGAG TGATTCACAATGCGC HQ2097A 1326351 - 1327076 + | hypothetical protein HQ2098A 1327423 - 1327295 - | integrase (PhiCh1 Int1-like) TERM 640 1328203 - 1328187 - g 85 -10.9 -3.91042 | opp_overlap 1328186 1328185 CACAAACAACGGAAA CGACAGT ATA ACTGTCG GATTTAATGATACCC HQ2099A 1328083 - 1328592 + | hypothetical protein HQ2100A 1329143 - 1328781 - | hypothetical protein HQ2101A 1329588 - 1329986 + | hypothetical protein HQ2102A 1330001 - 1330387 + | hypothetical protein TERM 641 1330403 - 1330393 - T 72 -3.2 -4.9218 | CATCGAGTAGAAAAA CGAG GGA CTCA GACTCCAGCCTGCTC HQ2103A 1330844 - 1330491 - | hypothetical protein HQ2104A 1331682 - 1332212 + | hypothetical protein TERM 642 1332878 - 1332913 + G 70 -9.6 -3.10775 | gap 1, opp_overlap 1332878, overlap 1332877 GCGGCCGTCAATTCA GGGCTGCTCCCGACGAG TGT CTTGGTGGGTGC-GCCC GTTTTCGGTGCAGGT HQ2105A 1332428 - 1333135 + | hypothetical protein HQ2106A 1333860 - 1334315 + | hypothetical protein HQ2107A 1335173 - 1336081 + | hypothetical protein HQ2108A 1336297 - 1336737 + | hypothetical protein HQ2109A 1337390 - 1337118 - | hypothetical protein HQ2110A 1338075 - 1337749 - | hypothetical protein TERM 643 1339295 - 1339309 + r 72 -6.4 -4.28049 | opp_overlap 1339286 GATACACGTCTCCGC TTTCGC CGA GCGAGA TTTTGCAGTTTTGGC HQ2111A 1339979 - 1339542 - | hypothetical protein HQ2112A 1342272 - 1341040 - | hypothetical protein TERM 644 1342370 - 1342381 + H 74 -5.8 -4.57353 | ACGACGACTGATGCT TCCG ATTA CGGA TTTTCTGTCATGCAC HQ2113A 1342584 - 1343192 + | hypothetical protein HQ2114A 1344262 - 1343774 - | pentapeptide repeat-containing protein TERM 645 1344424 - 1344457 + r 72 -10.4 -2.92425 | overlap 1344426 TGGACGCCTTGCTAT GATGGTTCTCGACC GGTCAG GGTTGAGAATCGTC TCTATCGACTTCATT HQ2115A 1345050 - 1344712 - | hypothetical protein HQ2116A 1345673 - 1345329 - | hypothetical protein TERM 646 1347824 - 1347836 + G 76 -9.1 -3.89971 | opp_overlap 1347823 1347822 CCCCGATGATGAACC GGGAG ACA CTCCC TTTGATCTACTTGTC HQ2117A 1347051 - 1348520 + | hypothetical protein TERM 647 1350415 - 1350425 + F 93 -6.8 -5.66868 | TCCAGTCCGGAGTGA CGGT TTT ACCG TTTTTTTAATTGGTT TERM 648 1351394 - 1351365 - g 83 -11.5 -3.49475 | gap 1 TTGACTGCCACAGAA CTCGCCGCTCTTGA TGC TCACGA-CGGCGAG GGTGTCCAGACGCTC TERM 649 1351646 - 1351673 + G 78 -11.3 -3.37796 | overlap 1351649 CGCGATGGATCTTGA CTGCGCGTTCG TCCACC CGAACGCGTGG TTATGCCTGCTGACC TERM 650 1351649 - 1351670 + G 76 -11.6 -2.85216 | overlap 1351646 GATGGATCTTGACTG CGCGTTCG TCCACC CGAACGCG TGGTTATGCCTGCTG ugpQ 1351161 - 1351832 + | glycerophosphodiester phosphodiesterase TERM 651 1352449 - 1352431 - f 79 -11 -3.4314 | overlap 1352429 GAAATCGGAACAACA CACTCCCC AGC GGAGAGTG GATCGCACAACTGCC HQ2121A 1353480 - 1353839 + | hypothetical protein HQ2122A 1353836 - 1354099 + | hypothetical protein HQ2123A 1354253 - 1354870 + | hypothetical protein TERM 652 1354862 - 1354850 - f 73 -10.5 -3.07291 | AACGACCTCATCGAA CCCCC GGA GGGGG AGCACTGATGGAGAC HQ2124A 1354870 - 1354986 + | hypothetical protein HQ2125A 1355469 - 1354987 - | hypothetical protein HQ2126A 1355925 - 1355473 - | hypothetical protein TERM 653 1356279 - 1356315 + G 81 -12.9 -2.85437 | opp_overlap 1356275, overlap 1356277 CGAGGAGTACAGCGG GCAGGCGAGCCCGACGA AGC TCGTCGAGATTGCCCGC TACTTCCTGTTCATC chrA 1356235 - 1357593 + | chromate transport protein TERM 654 1357765 - 1357775 + F 74 -6.8 -4.35518 | CTGGTGCTGTCGCTG GCGA TGT TCGC TTTTAGTCTCAGATT HQ2128A 1358300 - 1359100 + | hypothetical protein HQ2129A 1359250 - 1359594 + | hypothetical protein HQ2130A 1360479 - 1359961 - | hypothetical protein TERM 655 1360325 - 1360291 - G 79 -10.1 -3.63068 | TGACACGATGTCAAA CCTGTCGGCATCGA-CG CTG CGCTCGATG-CGACGGG TGTCCGGATATCCCT HQ2131A 1360770 - 1360480 - | hypothetical protein HQ2132A 1361093 - 1361383 + | hypothetical protein TERM 656 1361467 - 1361487 + G 74 -11.1 -2.90763 | opp_overlap 1361464 1361470, overlap 1361469 ACGTGGGGGAAAGAC GAACGGGTG ACA CACCCGATC TGTGTCGACTGTGCC TERM 657 1361484 - 1361470 - g 83 -11.4 -3.45571 | opp_overlap 1361469 1361467, overlap 1361464 TGGGGGAAAGACGAA CGGGTG ACA CACCCG ATCTGTGTCGACTGT HQ2133A 1361383 - 1361718 + | hypothetical protein HQ2134A 1361803 - 1362135 + | hypothetical protein TERM 658 1362543 - 1362527 - g 73 -8.7 -3.88291 | GACGATTCTCACAAA CGACGAA TCC TTCGCCG AGCTGGAGCCAGCAG HQ2135A 1362132 - 1362599 + | hypothetical protein HQ2136A 1362699 - 1363055 + | hypothetical protein HQ2137A 1363065 - 1363394 + | hypothetical protein TERM 659 1363763 - 1363785 + F 100 -16.2 -3.28924 | TGCCGCCTGCGCTGT CGCGCGCCAC ACC GCGGCGCGCG TTCTCGGCGACAGTC TERM 660 1363907 - 1363951 + F 82 -13.3 -2.78463 | TGGTCGTCCGCCTCG GGCGCGCTCTCGCTTGCGCCC ACA GGGCGCTCGCGAAGGCGCGAG TGTGGTCGGGAGACT HQ2138A 1364523 - 1364900 + | hypothetical protein HQ2140A 1366040 - 1366396 + | hypothetical protein HQ2141A 1366750 - 1369416 + | signal-transducing histidine kinase/response regulator HQ2142A 1369688 - 1369897 + | hypothetical protein HQ2143A 1370533 - 1370117 - | hypothetical protein TERM 661 1370877 - 1370859 - H 76 -8.8 -3.72352 | overlap 1370857 1370854 AACGAATAAACAACA GCGGTGAC ACA GTCACTGC GATCAAGAATGTTCC HQ2145A 1372177 - 1373256 + | hypothetical protein HQ2146A 1373914 - 1374018 + | hypothetical protein TERM 662 1374568 - 1374592 + G 90 -12.9 -3.76224 | opp_overlap 1374566 1374584 TTATCATAGATTACC TCGACGGTGTC GAA GACGTCGTCGA TTTCGTCGATGAACA HQ2147A 1374531 - 1374926 + | hypothetical protein TERM 663 1376468 - 1376446 - g 72 -11.2 -2.69964 | overlap 1376443 TTTGCAATCACACCA CGACGCCTGG CTG CCCGACGTCG GGAGCAAGCCGAGGA TERM 664 1378044 - 1378026 - g 79 -10.2 -3.64822 | opp_overlap 1378026 1378027, overlap 1378027 ATTCCTCGATGGAAA CCCGCCGC AGG GCGACGGA TTCGTTACATCAGAC TERM 665 1378043 - 1378027 - g 76 -11.5 -2.78679 | opp_overlap 1378026 1378027, overlap 1378026 TTCCTCGATGGAAAC CCGCCGC AGG GCGACGG ATTCGTTACATCAGA HQ2148A 1376299 - 1378887 + | hypothetical protein uvrD 1378884 - 1381781 + | DNA helicase II HQ2150A 1382832 - 1381963 - | putative protein-tyrosine-phosphatase TERM 666 1383550 - 1383576 + r 100 -8.8 -5.4251 | GGTCGAGAGGACTGC TATTGCTGCTTT TGA ATAGCGGCAATA TTTTTTATCTCTCAG HQ2151A 1385258 - 1384314 - | hypothetical protein HQ2152A 1385358 - 1385780 + | hypothetical protein HQ2153A 1385993 - 1386415 + | ATP-dependent Lon-type protease TERM 667 1387932 - 1387942 + G 77 -4.6 -4.85599 | GCGGCGATGAATGTC CTGC AAC GCGG TTTTTCTGAAGTAGG HQ2154A 1386834 - 1388060 + | IS1341-type transposase TERM 668 1388069 - 1388047 - f 100 -15.6 -3.47029 | opp_overlap 1388045, overlap 1388041 TCATCGAAACAGGAA GCCTCGGGGT TTG ACCCCGAGAC GGTTCACTAATCGAA HQ2155A 1388874 - 1389143 + | transcriptional regulator HQ2157A 1391000 - 1390308 - | hypothetical protein HQ2158A 1391616 - 1391149 - | hypothetical protein HQ2159A 1392326 - 1391622 - | hypothetical protein HQ2160A 1392837 - 1392388 - | hypothetical protein TERM 669 1392937 - 1392949 + r 77 -9.1 -3.85505 | opp_overlap 1392936 1392935 AGACCAATACGAACT CCGCT ATC AGCGG TTGTCTTCTTCCTCG HQ2161A 1393189 - 1392968 - | hypothetical protein HQ2162A 1393517 - 1393239 - | hypothetical protein HQ2163A 1394059 - 1393580 - | hypothetical protein HQ2164A 1396033 - 1395026 - | hypothetical protein HQ2165A 1396723 - 1396061 - | hypothetical protein TERM 670 1396135 - 1396164 + g 85 -10.9 -3.90291 | gap 1, opp_overlap 1396129 CTTCAGAAGTCGTGA TCATCA-CCAACGG AAG CTGTTGGATGATGA TTTGCTTGAGCCGAT TERM 671 1397599 - 1397620 + H 72 -9.4 -3.61715 | CTCACGCGCCCGACA CCGCGGTG CTCCTA CATCGCGG TTCTTCGACGACATC TERM 672 1398824 - 1398847 + G 80 -12.4 -2.75819 | opp_overlap 1398823 1398820, overlap 1398824 CAAGCCATCAAGTAC GGCGTCGACG ACGT CGTCGACGAC CTTTGCACGTATCTC TERM 673 1398824 - 1398848 + G 86 -12.2 -3.60234 | gap 1, opp_overlap 1398823 1398820, overlap 1398824 CAAGCCATCAAGTAC GG-CGTCGACG ACGT CGTCGACGACC TTTGCACGTATCTCG HQ2167A 1398026 - 1398949 + | hypothetical protein HQ2168A 1398946 - 1399179 + | hypothetical protein HQ2169A 1399333 - 1399866 + | hypothetical protein HQ2170A 1400289 - 1399939 - | hypothetical protein HQ2171A 1400557 - 1400267 - | hypothetical protein HQ2172A 1401173 - 1400751 - | hypothetical protein HQ2173A 1401675 - 1401241 - | hypothetical protein HQ2174A 1402217 - 1401684 - | hypothetical protein HQ2175A 1403008 - 1402367 - | hypothetical protein TERM 674 1402488 - 1402526 + g 91 -13.2 -3.31144 | gap 1, opp_overlap 1402486, overlap 1402494 AACTCCTCACGAACC GCGTCTCGGCTGAC-TG TCGTTT CGTGCCAGCCGAGACGC TTGTCGAAATACCGC HQ2176A 1403243 - 1403482 + | hypothetical protein HQ2177A 1404884 - 1403523 - | hypothetical protein TERM 675 1404635 - 1404602 - G 73 -7.4 -4.14392 | TCGCAACTTCGAAAA GCTCCTGTCGAATC TCCCGT GAGTCAACTGGAGC AACCGTCTCAAACTC rad25 1406280 - 1404871 - | DNA repair helicase RAD25 HQ2179A 1406716 - 1406345 - | hypothetical protein HQ2180A 1407223 - 1408206 + | hypothetical protein HQ2181A 1408266 - 1408556 + | hypothetical protein HQ2182A 1408549 - 1408722 + | hypothetical protein HQ2183A 1409442 - 1409095 - | hypothetical protein TERM 676 1409892 - 1409934 + r 85 -12.6 -3.32498 | opp_overlap 1409903, overlap 1409894 GTCACCCATCGAGGG CTGGTGAAGTACCTCGGGGT CAA GCCCCGAGGCACTCTGCCTG TTAATCTGTAGAGTC TERM 677 1409894 - 1409932 + r 86 -13.8 -3.22777 | opp_overlap 1409903, overlap 1409892 CACCCATCGAGGGCT GGTGAAGTACCTCGGGGT CAA GCCCCGAGGCACTCTGCC TGTTAATCTGTAGAG TERM 678 1409923 - 1409903 - R 83 -14 -2.71011 | opp_overlap 1409894 1409892 AGGGCTGGTGAAGTA CCTCGGGG TCAAG CCCCGAGG CACTCTGCCTGTTAA dctM 1412044 - 1410746 - | TRAP-type C4-dicarboxylate transport system,large permease component DctM (YiaN) dctQ 1412534 - 1412058 - | TRAP-type C4-dicarboxylate transport system,small permease component dctP 1413678 - 1412554 - | TRAP-type C4-dicarboxylate transport system,periplasmic component DctP (YiaO) HQ2187A 1413885 - 1414403 + | hypothetical protein HQ2188A 1414666 - 1414532 - | hypothetical protein sdt 1415269 - 1416246 + | sodium-dependent transporter HQ2190A 1416620 - 1416348 - | transcriptional regulator HQ2191A 1417708 - 1416797 - | acetamidase/formamidase family protein TERM 679 1417885 - 1417873 - g 89 -6.2 -5.21709 | TGGTAGATGAAAAAA CGCG TACTT CGCG ACGTAAGTTTCTCGC livJ 1417857 - 1419161 + | ABC-type branched-chain amino acid transport systems, substrate-binding protein livF 1419579 - 1419175 - | ABC-type branched-chain amino acid transport systems, ATP-binding protein II livF 1419879 - 1419694 - | ABC-type branched-chain amino acid transport systems, ATP-binding protein II livG 1420670 - 1419876 - | ABC-type branched-chain amino acid transport systems, ATP-binding protein I livM 1421986 - 1420670 - | ABC-type branched-chain amino acid transport system, permease protein II livH 1423101 - 1421983 - | ABC-type branched-chain amino acid transport system, permease protein I TERM 680 1423061 - 1423049 - G 71 -4.8 -4.61633 | opp_overlap 1423053, overlap 1423053 ACATATTCTGAAAAA GGGA GGCGT TCCC ACACCGTGTTAATAT HQ2198A 1423906 - 1424187 + | homolog to transcription regulator TERM 681 1424834 - 1424804 - g 73 -9.9 -3.39018 | gap 1, opp_overlap 1424803 1424804 1424808 1424831, overlap 1424802 TGACCACCTCAAAGA TGACGTCGAGGTCT TCGC AAACCTCGAC-TCA GTTATCTGGGTATTT HQ2199A 1424715 - 1424987 + | hypothetical protein HQ2201A 1426996 - 1425602 - | hypothetical protein TERM 682 1427201 - 1427180 - R 71 -10.1 -3.17075 | TGCCGTTCAATGGAA TCTTCGCCC TTCA GGGCGGAGA GGATGTCAATCGTGC HQ2202A 1427933 - 1427580 - | PemK-like growth inhibitor protein (MazF protein) HQ2203A 1428166 - 1427930 - | hypothetical protein HQ2204A 1428801 - 1428980 + | hypothetical protein HQ2205A 1428977 - 1429192 + | hypothetical protein HQ2206A 1429189 - 1429434 + | hypothetical protein sqlE 1431416 - 1430070 - | oxidoreductase TERM 683 1431176 - 1431215 + g 76 -10.7 -3.12606 | opp_overlap 1431176 1431175 ATCCCGGAAAGAGAT CCTCAAGCGTTGCTCGA CCAGCT TCGAGCAGTGCATGTGG TTGGCTGGTCTGTGG HQ2208A 1432045 - 1433307 + | hypothetical protein HQ2209A 1434170 - 1433958 - | hypothetical protein narK 1436553 - 1435237 - | nitrate/nitrite transporter narB 1439220 - 1437133 - | nitrate reductase, catalytic subunit TERM 684 1438199 - 1438183 - G 71 -9.3 -3.55444 | opp_overlap 1438189 CGCTGAGTCTCCAAA GGCGCGG TGA CCGGGCC ACGTTCCTTTCGAGG TERM 685 1438974 - 1438959 - G 71 -8.2 -3.65201 | overlap 1438949 1438960 GAACAGCCTCAACAA GCCGCG TTGC CGCGAC GCCAAGCGCGGTGTC TERM 686 1439902 - 1439886 - g 75 -10.1 -3.36452 | opp_overlap 1439898 ATTGGCGAACACCAA CGGCGTC CTG AACGCCG AACAACTCCGCGTCA nirA 1439683 - 1441458 + | ferredoxin--nitrite reductase narB 1441591 - 1443714 + | nitrate reductase, catalytic subunit HQ2214A 1443736 - 1444017 + | hypothetical protein HQ2215A 1445443 - 1444721 - | hypothetical protein HQ2216A 1445981 - 1447066 + | hypothetical protein HQ2217A 1447456 - 1448163 + | hypothetical protein TERM 687 1448194 - 1448177 - T 73 -10.5 -2.98524 | overlap 1448176 AATCAGCGAAAGAAT CCCGACG TTCA CGCCGGG CGAGGATGTCACGAC TERM 688 1448426 - 1448407 - T 93 -15 -3.06315 | TGAACAGGCTCAATA CCACGCCG TTCA CGGCGTGG ATACGCGCCGTCACA gufA 1449646 - 1449026 - | divalent heavy-metal cations transporter TERM 689 1449909 - 1449925 + H 81 -12.3 -3.18383 | ATCTACAGGCGTTGA CGAGAGC GAA GCTCTCG TTCGTACATCAGAAT TERM 690 1450493 - 1450481 - g 78 -5.5 -4.91109 | GCGTGATGAGAAAAA GGCAA AGG CTGCC CGAATATACGTCGAT HQ2219A 1450116 - 1450523 + | hypothetical protein HQ2220A 1451724 - 1451383 - | hypothetical protein nikR 1451915 - 1452343 + | putative nickel responsive regulator HQ2222A 1453580 - 1452513 - | hypothetical protein TERM 691 1452704 - 1452721 + g 74 -11.3 -2.76261 | opp_overlap 1452694, overlap 1452703 CAAGACCGCCTGGTG TCGGTGC AACT GCACCGA GTTTGGCGATTGGAA HQ2223A 1454403 - 1455125 + | hypothetical protein TERM 692 1455873 - 1455857 - f 76 -8 -4.32482 | opp_overlap 1455862 AGCGACAATCGAAAA CGAGGT GACGG ACCTCG TCGTCATTAACAGTC HQ2224A 1456637 - 1456801 + | hypothetical protein HQ2225A 1457646 - 1457275 - | transcription regulator pncA 1458405 - 1459115 + | isochorismatase TERM 693 1459663 - 1459676 + F 70 -2.4 -5.04385 | CGGGCGGGCTGAGAC TCCT CACGCA AGGA TTTTTTCGCAGTGTG HQ2227A 1459757 - 1460131 + | hypothetical protein HQ2228A 1460338 - 1460853 + | hypothetical protein HQ2229A 1461238 - 1462323 + | hypothetical protein sugE 1462826 - 1462503 - | small multidrug export protein HQ2231A 1463309 - 1464541 + | major facilitator superfamily transporter HQ2232A 1465132 - 1466496 + | restriction system mrr-like protein TERM 694 1467040 - 1467072 + G 73 -2.1 -5.16841 | gap 3 CCATACCGATCTCCG CGGCT-CAGCTGAGTG GACT CG-TC-GCTGCAGCCG TTTTTATTGGTGTCA cat 1466625 - 1468085 + | cationic amino acid transport protein HQ2234A 1468178 - 1468897 + | hypothetical protein TERM 695 1469129 - 1469149 + G 80 -6.9 -4.78107 | opp_overlap 1469129 TTCGGGACGACGATA CAGCAATTG AGA CAGTTGTTG TTTTTACTCCTGATA HQ2235A 1468903 - 1469667 + | hypothetical protein metE 1472223 - 1469920 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase ocd 1474297 - 1473218 - | ornithine cyclodeaminase TERM 696 1474410 - 1474388 - R 73 -7.6 -4.09685 | TGTGAGCGGTGAAAA GCACGACGAC ATC GCCTCCGTGC TTAACCAAATCCGTG gufA 1475579 - 1474617 - | divalent heavy-metal cations transporter TERM 697 1475197 - 1475218 + g 75 -5.1 -4.68209 | gap 1 GGTCCACCATCAGTA CCGATATCCG GAG CGGG-GTCGG TTTGTTTATTACCCT TERM 698 1475520 - 1475496 - G 79 -3.6 -5.28176 | gap 1, overlap 1475499 CTCATCTATAAAAAA GAACGGAATCG CCCC CAATCCCGT-C GCCAACGCGGTTGCG TERM 699 1475518 - 1475499 - G 80 -6.4 -4.73105 | overlap 1475496 ATCTATAAAAAAGAA CGGAATCG CCCC CAATCCCG TCGCCAACGCGGTTG HQ2239A 1475808 - 1475990 + | hypothetical protein hyuB 1478288 - 1476441 - | N-methylhydantoinase B (ATP-hydrolyzing) hyuA 1480404 - 1478347 - | N-methylhydantoinase A (ATP-hydrolyzing) HQ2243A 1481403 - 1481158 - | hypothetical protein cysA 1482746 - 1481727 - | ABC-type sulfate/molybdate transport systems,ATP-binding protein TERM 700 1481884 - 1481874 - G 73 -5.4 -4.55287 | opp_overlap 1481874 CTCACCGAGATAAAA TCGA TCC TCGA TTGTCGCCTCGATTG cysT 1483763 - 1482747 - | ABC-type sulfate/molybdate transport system,permease protein cysU 1484773 - 1483760 - | ABC-type sulfate/molybdate transport systems,permease protein TERM 701 1484730 - 1484710 - G 73 -5.3 -4.57073 | opp_overlap 1484713, overlap 1484713 CAGTGGTTGGAAAAA TAACCTGCC CAA GGCGGGTTT CTCGAATGCGGCCAA TERM 702 1484727 - 1484713 - G 76 -7 -4.40561 | opp_overlap 1484713, overlap 1484710 TGGTTGGAAAAATAA CCTGCC CAA GGCGGG TTTCTCGAATGCGGC TERM 703 1484713 - 1484727 + g 76 -9.2 -3.89346 | opp_overlap 1484710 1484713 TGGTTGGAAAAATAA CCTGCC CAA GGCGGG TTTCTCGAATGCGGC HQ2247A 1485948 - 1484779 - | sulfate/molybdate ABC transporter periplasmic substrate-binding protein HQ2249A 1487260 - 1486463 - | hypothetical protein HQ2250A 1487597 - 1487773 + | hypothetical protein HQ2251A 1487955 - 1488185 + | hypothetical protein cadA 1491560 - 1488975 - | cadmium-transporting ATPase TERM 704 1491396 - 1491410 + g 73 -2.1 -5.03715 | overlap 1491397 CTGTGAGTCAATATC TTGGA CTGCA TCCAG TTTTTTGACGCTGGT TERM 705 1491860 - 1491843 - R 76 -4.8 -4.87665 | CTCCATTCATAAAAA GCACCC CTCGTC GAGTGC TCCACTCACCCACTA TERM 706 1492089 - 1492044 - R 87 -10.3 -4.18983 | gap 1, opp_overlap 1492042 1492045, overlap 1492045 TCATAGAAACAAGAA GCCCCACCCT-CACAGAAGCCG CGT CAGCGGCTGAGTAGGGTGGGGT AATTCACTCTGTGTA TERM 707 1492088 - 1492045 - R 85 -13.8 -3.10305 | gap 1, opp_overlap 1492045 1492042, overlap 1492044 CATAGAAACAAGAAG CCCCACCCT-CACAGAAGCCG CGT CAGCGGCTGAGTAGGGTGGGG TAATTCACTCTGTGT TERM 708 1492045 - 1492088 + r 79 -12.5 -2.78422 | gap 2, opp_overlap 1492044 1492045, overlap 1492042 CATAGAAACAAGAAG CCCCACCCTCACAGAAGCCGC GTCA GCGGC-TGAGT-AGGGTGGGG TAATTCACTCTGTGT HQ2253A 1492419 - 1492093 - | hypothetical protein HQ2254A 1492698 - 1493153 + | hypothetical protein TERM 709 1495478 - 1495429 - g 76 -10.7 -3.23042 | overlap 1495431 1495432 AAGATTCAGCATCAA CACTACCCCCAACGTCAACGTCG ACGT CGACGTCGACGTCGACGCCAGCA TTAACACCGGTCACA TERM 710 1495476 - 1495431 - g 88 -13.3 -3.17527 | overlap 1495429 1495432 GATTCAGCATCAACA CTACCCCCAACGTCAACGTCG ACGT CGACGTCGACGTCGACGCCAG CATTAACACCGGTCA TERM 711 1495481 - 1495432 - g 81 -12.9 -2.50195 | overlap 1495431 1495429 ATTCAGCATCAACAC TACCCCCAACGTCAACGTCGACG TCGA CGTCGACGTCGACGCCAGCATTA ACACCGGTCACATCA HQ2255A 1493502 - 1496432 + | hypothetical protein TERM 712 1496440 - 1496430 - g 71 -4 -4.68511 | GGTAAGACAAATAAA TGAA ACT TTCA GGTCAGCGTATAACC HQ2256A 1496429 - 1497148 + | hypothetical protein HQ2257A 1497157 - 1498506 + | hypothetical protein TERM 713 1498758 - 1498785 + G 81 -3.4 -5.40072 | gap 1 AGTCTCGGCGTGGCA GCACTTG-AGAGT GAT ACCCTTCCAGTGC TTTTTTTCAGAGGCA TERM 714 1499356 - 1499372 + G 74 -4.3 -4.87893 | TTGAACTTTCCGTAT CACCTGG ATT CCGTGTG TTTTTGATTGCGATT HQ2258A 1498503 - 1500059 + | hypothetical protein moxR 1501157 - 1500183 - | MoxR-like ATPase HQ2260A 1502039 - 1501671 - | hypothetical protein HQ2261A 1502619 - 1502221 - | hypothetical protein HQ2262A 1503197 - 1502667 - | hypothetical protein HQ2263A 1503847 - 1503197 - | hypothetical protein TERM 715 1503382 - 1503394 + g 75 -7.7 -4.18506 | CCGGTTCACCGTGTT GTCGA CTA TCGAC TTCTTTTGCAACTAA HQ2264A 1504347 - 1504808 + | hypothetical protein HQ2265A 1505462 - 1504980 - | pyridoxamine 5'-phosphate oxidase TERM 716 1505411 - 1505423 + g 73 -4.8 -4.66537 | opp_overlap 1505411, overlap 1505398 TCTGTGCTTCAGTAA GCAC CTGTC GTGC TTTTGTCTTCGACGA HQ2266A 1505847 - 1505704 - | periplasmic serine proteinase (fragment) HQ2268A 1506295 - 1506846 + | hypothetical protein HQ2269A 1509298 - 1508228 - | CBS domain-containing protein TERM 717 1508331 - 1508298 - G 80 -12.5 -2.78463 | gap 1, opp_overlap 1508299 ATTGTTTCCAGTAGA TCGGTGACGGTCACCA ACC CGGTGACC-TCACCGT CTTCAATGACGAGCC TERM 718 1508299 - 1508330 + g 100 -15.3 -3.08679 | gap 1, opp_overlap 1508298 TTGTTTCCAGTAGAT CGGTGACGGTCACC AACCC GGTGACC-TCACCG TCTTCAATGACGAGC nagD 1510199 - 1509408 - | putative N-acetyl-glucosamine catabolism protein TERM 719 1510360 - 1510391 + H 70 -9.6 -3.08934 | opp_overlap 1510374, overlap 1510349 1510366 GCTTGTAGCGCTGGC TGCTGTGTTGAAGA TCTG TATTCAATACAGCA TCTTCGGGTATATGA HQ2271A 1510607 - 1512364 + | ferredoxin domain-containing protein TERM 720 1513232 - 1513216 - T 74 -7.3 -4.22949 | CACAACAGAGACAAA CGACAGT GAT ACTATCG TGCATGCTGTTCCGG HQ2273A 1514256 - 1513504 - | hypothetical protein HQ2274A 1514491 - 1515393 + | hypothetical protein TERM 721 1516447 - 1516461 + G 74 -2.8 -5.05782 | overlap 1516441 ATCAATTGGGCTGCC GACG GAGACAG CGTC TTTTTTCACCTCGAT dap2 1516225 - 1518114 + | dipeptidyl aminopeptidases/acylaminoacyl-peptidases HQ2277A 1519249 - 1519509 + | hypothetical protein HQ2278A 1519653 - 1519844 + | hypothetical protein TERM 722 1520441 - 1520459 + G 72 -11 -2.56596 | overlap 1520437 TGAGGAACGCGTCGA GTCGGGAG CCG CTCCTGAC TGGGTTACTGCCCAC TERM 723 1521129 - 1521113 - g 71 -10.1 -2.88069 | overlap 1521110 GTCAGACGACAAGCA GGCACCC GAT GAGTGCC CAATCAACATTACAC HQ2279A 1520382 - 1521206 + | hypothetical protein entB 1521210 - 1521761 + | isochorismatase HQ2281A 1522447 - 1523103 + | hypothetical protein HQ2282A 1523413 - 1524585 + | hypothetical protein HQ2283A 1526016 - 1525231 - | hypothetical protein HQ2284A 1526327 - 1526013 - | hypothetical protein HQ2285A 1527822 - 1526428 - | major facilitator superfamily transporter TERM 724 1526947 - 1526927 - G 76 -8.9 -3.96327 | overlap 1526928 1526939 ACTCCGTATGAGAAA CCCGCCAGC GAA GCTGTCGGA TTAAACCCGACCTCG TERM 725 1526946 - 1526928 - G 72 -10.2 -2.97475 | overlap 1526927 1526939 CTCCGTATGAGAAAC CCGCCAGC GAA GCTGTCGG ATTAAACCCGACCTC TERM 726 1528215 - 1528196 - R 72 -8.6 -3.69469 | gap 1, overlap 1528194 AGATTTGAATAAACA GGCA-GGCT ACT AGCCGTGCC AAACGACCGTTACCC TERM 727 1529640 - 1529681 + r 72 -5.8 -4.45696 | gap 2, overlap 1529641 1529663 ACATGCGCCGGAGTG ACGCG-GTTCACC-CCCGAC CTCG GTAGGGCGGGGAACTCGCGC TGTTTTTTATTTAGA TERM 728 1529663 - 1529683 + r 89 -5.3 -5.63517 | overlap 1529641 1529640 CACCCCCGACCTCGG TAGGGCGGG GAA CTCGCGCTG TTTTTTATTTAGAAA TERM 729 1530270 - 1530286 + r 75 -6.5 -4.41512 | opp_overlap 1530265 AATTTCAAATGATGG GGCTGCA TCC TACAGCC TGTTTTTTGTTCTCC HQ2287A 1530991 - 1530353 - | hypothetical protein HQ2288A 1531271 - 1532404 + | thiosulfate sulfurtransferase HQ2289A 1532517 - 1533272 + | hypothetical protein TERM 730 1534389 - 1534410 + G 71 -7.1 -3.99806 | overlap 1534390 1534404 1534405 GAGTATTTGACATCC TCCCCGCGC TGAA GCGCGAGGC TTTCTCCTCGATTCT TERM 731 1534390 - 1534409 + G 72 -10.6 -2.99161 | overlap 1534389 1534404 1534405 AGTATTTGACATCCT CCCCGCGC TGAA GCGCGAGG CTTTCTCCTCGATTC HQ2290A 1534346 - 1534573 + | hypothetical protein oxlT 1536058 - 1534835 - | oxalate/formate antiporter TERM 732 1536047 - 1536037 - G 71 -6.8 -4.27483 | opp_overlap 1536037, overlap 1536032 ATCGAGAAAACGAAA GCGA ACG TCGC TGTTCAGCCATCGCC HQ2293A 1536710 - 1537069 + | hypothetical protein HQ2294A 1537606 - 1537280 - | hypothetical protein TERM 733 1537524 - 1537552 + g 70 -7.6 -3.89182 | gap 1, opp_overlap 1537524 1537518, overlap 1537516 1537517 ACCTCAAGACTAAAT GAGTCTGTTCGGA TCGA TTC-AACAGACTC TTTAGCTTCTTCTTC chlID 1540312 - 1538024 - | magnesium chelatase (protoporphyrin IX magnesium-chelatase) TERM 734 1540119 - 1540168 + g 76 -7.2 -4.47307 | gap 1, opp_overlap 1540120 1540123, overlap 1540123 1540126 TATGAACACTCAGCA ACGACACGCTGTTCGGGCAATAT CGTCT GTAGTGCCCGCACAGC-TGTTGA TTTTGCTGTTCCTTT TERM 735 1540123 - 1540164 + g 71 -8.8 -3.75465 | gap 1, opp_overlap 1540120 1540123, overlap 1540119 1540126 AACACTCAGCAACGA CACGCTGTTCGGGCAATAT CGTCT GTAGTGCCCGCACAGC-TG TTGATTTTGCTGTTC TERM 736 1540126 - 1540162 + g 82 -11.6 -3.44148 | opp_overlap 1540123 1540120, overlap 1540123 1540119 ACTCAGCAACGACAC GCTGTTCGGGCAATAT CGTCT GTAGTGCCCGCACAGC TGTTGATTTTGCTGT TERM 737 1543888 - 1543869 - g 79 -3.5 -5.20534 | overlap 1543871 ACGAATGAAGAAAAA GTTCGCA AAGCAA TGCGAGC ACGCGTCCTCAATCC TERM 738 1543897 - 1543915 + G 72 -10.4 -3.05816 | overlap 1543901 TGCGAGCACGCGTCC TCAATCCA GCG TGGATTGA TTCGATGAAAGATCA cobN 1540356 - 1544288 + | cobalt chelatase cbiC 1544278 - 1545057 + | precorrin-8X methylmutase cbiE 1545054 - 1545836 + | cobalt-precorrin-6Y C(5)-methyltransferase TERM 739 1545990 - 1545972 - f 70 -5.3 -4.47707 | overlap 1545973 TCCGAGCAAAAACAA CGGATTC TGAGT GAATCCA CGATGACTTCAGCTA HQ2299A 1546227 - 1546763 + | atp-binding cobalamin adenosyltransferase TERM 740 1546832 - 1546844 + T 71 -3.4 -4.8083 | ATATGAATGCTATCA TCAC GATTA GTGA TTTTTCCTAATATTG argK 1548134 - 1546860 - | transport ATPase, component for LAO/AO transport systems TERM 741 1547765 - 1547779 + g 75 -11.4 -2.70932 | opp_overlap 1547765 TTGAGAGACCACCAA GCGCTC CAC GAGCGC TCATTGACCGGACAA TERM 742 1547779 - 1547765 - G 79 -11.4 -3.26545 | opp_overlap 1547765 TTGAGAGACCACCAA GCGCTC CAC GAGCGC TCATTGACCGGACAA mcmB 1548547 - 1548131 - | methylmalonyl-CoA mutase, subunit B (cobalamin-binding subunit) TERM 743 1548513 - 1548529 + g 71 -2.9 -4.84146 | overlap 1548516 ACTTTCGCGATCATG CATCGGA CGC TCTGTTG TTTGTTTTCTGTGCT hbd 1548839 - 1549702 + | 3-hydroxyacyl-CoA dehydrogenase TERM 744 1549853 - 1549889 + T 70 -9.4 -3.30771 | overlap 1549855 TGAGGTGGGGGCGGG TGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTA TTCTCGACCATGTAC TERM 745 1549855 - 1549887 + T 71 -9.8 -3.22102 | overlap 1549853 AGGTGGGGGCGGGTG GGACTGCTGGCGGT GCCAA GCCGCCGGTACTCC TATTCTCGACCATGT TERM 746 1550222 - 1550240 + T 93 -16 -3.04792 | CGTGACGGCGCGTAT CCACGGCC TGA GGCCGTGG TATTGCGCCTGCTCA TERM 747 1550340 - 1550328 - T 72 -9.1 -3.64162 | opp_overlap 1550330 1550331, overlap 1550331 ATGAACCATCGTAAA CGACC ACG GGTCG GGTGACCCCTGGCTT TERM 748 1550330 - 1550353 + T 75 -6.6 -4.431 | opp_overlap 1550328 1550331, overlap 1550331 GAACCATCGTAAACG ACCACGGGTC GGGT GACCCCTGGC TTTTCTAAGTCCCTC TERM 749 1550331 - 1550352 + T 71 -10.1 -3.25378 | opp_overlap 1550328 1550331, overlap 1550330 AACCATCGTAAACGA CCACGGGTC GGGT GACCCCTGG CTTTTCTAAGTCCCT cbiO 1551208 - 1550372 - | ABC-type cobalt transport system, ATP-binding protein cbiQ 1552020 - 1551205 - | ABC-type cobalt transport system, permease protein II HQ2305A 1552346 - 1552026 - | cobalamin transport operon protein cbiM 1553026 - 1552346 - | ABC-type cobalt transport system, permease protein I TERM 750 1554203 - 1554177 - g 77 -6.7 -4.56914 | gap 2, overlap 1554172 1554178 GGACTCAAAGCAAAA GGACATCCTGTTG GGG CAACAGG-TG-CC GCACAGATCGCAGAA acaB 1553181 - 1554347 + | acetyl-CoA C-acyltransferase HQ2308A 1554344 - 1554730 + | hypothetical protein phaB 1555639 - 1554896 - | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) PhaB phaC 1557222 - 1555807 - | Poly-beta-hydroxybutyrate polymerase polyhydroxyalkanoic acid synthase PhaC HQ2311A 1557773 - 1557219 - | phbC-phbA intergenic region protein HQ2312A 1558416 - 1557952 - | hypothetical protein HQ2313A 1558787 - 1558422 - | hypothetical protein TERM 751 1559125 - 1559113 - g 70 -7.7 -3.83205 | ATCGCCTATAGTAAA TCGTC ATG GACGA CAGTTCAGTCAGTTG maoC 1558909 - 1559586 + | enoyl-CoA hydratase HQ2316A 1559676 - 1560431 + | hypothetical protein TERM 752 1560650 - 1560666 + T 77 -10.9 -3.14344 | AAATCAACGTCGTCC GAGAGAC AAA GTCTCTC TTGATCAGGAAAATC leuS 1563808 - 1561085 - | leucyl-tRNA synthetase TERM 753 1561230 - 1561245 + g 79 -10.4 -3.75292 | AGCATTTCATATTCG CGCTCC GGTG GGAGCG TTGTTGCTAATGCCT TERM 754 1564153 - 1564201 + H 79 -8.8 -4.10657 | overlap 1564156 1564156 1564158 TGAGTCGGGTGCGGG TGCGGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCCTA TTTTCGACCATATAC TERM 755 1564156 - 1564198 + H 79 -12.7 -2.78508 | overlap 1564156 1564153 1564158 GTCGGGTGCGGGTGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTTTCGACCATA TERM 756 1564156 - 1564199 + H 79 -10.3 -3.64984 | gap 1, overlap 1564153 1564156 1564158 GTCGGGTGCGGGTGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTTTCGACCATAT TERM 757 1564158 - 1564196 + H 77 -11.7 -2.93623 | overlap 1564156 1564156 1564153 CGGGTGCGGGTGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTTTCGACCA TERM 758 1564332 - 1564369 + H 72 -5.6 -4.48997 | gap 1, overlap 1564330 ATCTGCATCGGTTCA TTATCGGAACC-GACCG TTCAC CAGACTGGTTCCGATGA TTGTTTTATTGCTTG TERM 759 1564540 - 1564559 + H 93 -15 -3.04792 | CGTGACGGCGCGTAT CCACGGCC TGAG GGCCGTGG TATTGCGCCTGCTCA TERM 760 1565404 - 1565384 - H 70 -9.7 -3.01712 | CGGTCTCTGTTAACA GTGTGGTGA TAT TCACCTCAC TAGAACTCCCTCCGG TERM 761 1566813 - 1566780 - g 88 -11.7 -3.96298 | overlap 1566782 CAGCGACTAATGAAA GAGGCCGAGGTTTCC TGGA AGAAACCTCGGCCAG AACCAGCCTCGGCTG TERM 762 1566811 - 1566782 - g 100 -18.7 -3.56844 | overlap 1566780 GCGACTAATGAAAGA GGCCGAGGTTTCC TGGA AGAAACCTCGGCC AGAACCAGCCTCGGC HQ2319A 1566363 - 1566887 + | transposase homolog (ISHnew96) TERM 763 1566952 - 1567010 + F 95 -12.7 -4.16284 | gap 2, opp_overlap 1566971, overlap 1566956 GATCTCAGATATGCG TGGTTTCCGATTGACGAGAGGCCGACA GTGAACG TGTCGGCCTCTCG-CGAT-GGAATCAA TTTCTTGGGCGGTCT TERM 764 1566956 - 1567006 + F 95 -16.5 -2.75825 | gap 2, opp_overlap 1566971, overlap 1566952 TCAGATATGCGTGGT TTCCGATTGACGAGAGGCCGACA GTGAACG TGTCGGCCTCTCG-CGAT-GGAA TCAATTTCTTGGGCG TERM 765 1566993 - 1566971 - f 72 -10.6 -2.80816 | opp_overlap 1566956 1566952 TTCCGATTGACGAGA GGCCGACA GTGAACG TGTCGGCC TCTCGCGATGGAATC TERM 766 1567427 - 1567402 - f 74 -5.5 -4.60678 | gap 1, overlap 1567405 1567406 TAAAAACATAATAAA GAACCTGATTAG ACA CTAATC-GGTAC AGAGCCGCCGCAACC HQ2323A 1569129 - 1569527 + | hypothetical protein msrA 1570281 - 1569664 - | peptide methionine sulfoxide reductase (S-form specific) HQ2325A 1570386 - 1571801 + | oxidoreductase, oxygen dependent,FAD-dependent protein TERM 767 1572079 - 1572091 + T 74 -5.5 -4.68908 | overlap 1572072 CAGCAAAGTTGGAAC GCCAG TTT TTGGC TTTATTTTGAGTCAA epf 1573201 - 1572203 - | mRNA cleavage and polyadenylation specificity factor-like protein ligB 1575195 - 1573339 - | DNA ligase (ATP) TERM 768 1575144 - 1575164 + g 76 -11.9 -2.91264 | CCTTCTGGGTCGTTG CTGATGTCG CAG CGACGTCAG TATATACCTCAGCGA HQ2328A 1575737 - 1575312 - | hypothetical protein TERM 769 1575431 - 1575449 + g 73 -9.6 -3.34962 | overlap 1575426 TCTGACCATCCTCGC CAGTGAGT GTT ACTCGCTG TTGTGCACTGTCACC glpG 1576501 - 1575812 - | rhomboid family protein HQ2330A 1577024 - 1576734 - | hypothetical protein HQ2331A 1577137 - 1577928 + | hypothetical protein HQ2332A 1578154 - 1578846 + | S-adenosylmethionine-dependent methyltransferase HQ2333A 1579412 - 1579266 - | hypothetical protein nce 1580768 - 1579731 - | Na+/Ca2+-antiporter HQ2335A 1580958 - 1581842 + | nucleoside diphosphate sugar epimerase ferA 1581955 - 1582440 + | ferredoxin I HQ2337A 1582462 - 1582662 + | hypothetical protein HQ2338A 1583064 - 1582732 - | hypothetical protein TERM 770 1584057 - 1584040 - g 77 -2.7 -5.20333 | TACCGAGAATAAAAA TCGACAT CCAG ATCTCGA GCAGACGGCTGAGTC hflX 1583381 - 1585066 + | GTP-binding protein moaC 1585635 - 1585096 - | putative molybdenum cofactor biosynthesis protein C HQ2341A 1587130 - 1585628 - | sugar kinase TERM 771 1587795 - 1587775 - g 70 -9.7 -3.09933 | opp_overlap 1587775, overlap 1587787 1587792 TCGGAATTCATGGAA CGGCTGC ACAAATA GCAGCCG TCATTGCGGCACCTA HQ2342A 1587375 - 1588559 + | major facilitator superfamily transporter HQ2343A 1588862 - 1588644 - | hypothetical protein nqrF 1589489 - 1590178 + | FAD/NAD binding oxidoreductase; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF HQ2345A 1590666 - 1590277 - | hypothetical protein usp 1590912 - 1591355 + | stress response protein TERM 772 1591385 - 1591355 - f 76 -11.9 -2.58812 | opp_overlap 1591352, overlap 1591351 TGCAAACGGAACGTA GCGTATCTCAGGG ATAAG CCCCGAGATACTC GCCTTGCTTATTTGC HQ2347A 1591470 - 1592303 + | hypothetical protein HQ2348A 1592529 - 1592383 - | hypothetical protein HQ2349A 1593263 - 1592811 - | hypothetical protein HQ2350A 1593600 - 1593376 - | hypothetical protein TERM 773 1593501 - 1593511 + g 73 -3.2 -5.00616 | overlap 1593471 1593483 CCGAGAGGCCAATTG CGTC GGC GATG TTTTTTGCACGGAAG TERM 774 1594600 - 1594563 - g 91 -13.5 -3.35996 | opp_overlap 1594557 1594556 CACGGTGATCCAGAA GCGGTCGATACATTAGC GAAT GCAAACGTATCGACTGC TCGTGCGCTTATCGC kchA 1594053 - 1595714 + | Kef-type potassium channel protein coxC 1596585 - 1595725 - | cytochrome-c-like terminal oxidase, subunit III TERM 775 1596685 - 1596709 + r 90 -12.9 -3.57144 | overlap 1596686 CTCTATTAGTCAGCG TGACCGCACAG TGC TTGTGCGGTCG TTTCAGAGTCAGACC TERM 776 1596686 - 1596708 + r 83 -14.2 -2.74144 | overlap 1596685 TCTATTAGTCAGCGT GACCGCACAG TGC TTGTGCGGTC GTTTCAGAGTCAGAC fdfT 1597807 - 1596734 - | farnesyl-diphosphate farnesyltransferase (squalene synthase) TERM 777 1596949 - 1596938 - G 85 -5.8 -5.12971 | opp_overlap 1596938 AACAGCCAATAAAAA TGGG ATAG CCCA TGCTTCAAGTGTATT HQ2355A 1598602 - 1598883 + | hypothetical protein pssA 1599715 - 1599017 - | CDP-diacylglycerol--serine O-phosphatidyltransferase (phosphatidylserine synthase) TERM 778 1599279 - 1599256 - G 77 -10.4 -3.51365 | overlap 1599276 CTAGAGCGGACAGAA TCGCTGGATT TGTG AATCCAGCAA GCACGCTTGCAGCAA hcpH 1599872 - 1600348 + | halocyanin hcpH rps3aR 1601068 - 1600430 - | 30S ribosomal protein S3Ae HQ2359A 1601684 - 1601061 - | rps operon protein HQ2360A 1603356 - 1601695 - | rps operon protein rps15p 1604013 - 1603537 - | 30S ribosomal protein S15P TERM 779 1603953 - 1603999 + g 72 -10.9 -2.57092 | gap 2, opp_overlap 1603985, overlap 1603949 TCCACTCTGGGGGGT CATCTGCCACCG-GCTT-GTCCG AAC CGGACGAACCGCGGCGGCGGGTG TGCATTCGTGCCATT TERM 780 1605214 - 1605182 - g 81 -7.8 -4.56914 | CTATTGAAATCAAAA CTCCATCGG-GCCCGT GTG ACAGGCACCGA-GAAG GATTATGAGGGGAGC panD 1605155 - 1605499 + | aspartate 1-decarboxylase precursor (aspartate alpha-decarboxylase) TERM 781 1606173 - 1606140 - g 79 -9.6 -3.83026 | CCTCGGCAGATGAAA CGACACGTGATGAG GATCCT CTCACCACGCTTCG ACAGCGATACGCGAA HQ2364A 1605908 - 1606327 + | hypothetical protein TERM 782 1606403 - 1606416 + F 83 -9.5 -4.16842 | opp_overlap 1606389 ACCCCTGCCTACTCA GCGGC TGAC GCCGC TTTCTTGAGGGTGGG TERM 783 1607440 - 1607389 - g 76 -7.2 -4.43844 | gap 1, overlap 1607391 GCACCAGTCACAAAA GTGGGGCTCACACA-TCGCGGAGTC ATT GATTCGGCAAGTGTGAGAGCACCGC TCGTCGAACTGCCGG dapA 1606603 - 1607511 + | dihydrodipicolinate synthase adh 1607579 - 1608604 + | alcohol dehydrogenase TERM 784 1609378 - 1609358 - T 70 -4.7 -4.41348 | overlap 1609361 TTTGCGTGAAATAAA CTATCCAAC TAA GTTAGATTG AAAGTAACTCGACAA HQ2368A 1609799 - 1609371 - | homolog to lyase/ dioxygenase tenA 1610035 - 1610700 + | transcription regulator TERM 785 1611700 - 1611712 + G 83 -4.1 -5.49569 | opp_overlap 1611688 1611700, overlap 1611692 AAGTGCAGCATACAA TGCTG ATG TAGCA TTTTTTGTCTTACTC TERM 786 1611939 - 1611961 + G 80 -7 -4.53777 | overlap 1611944 CTATCTATGTTAGTG TCCGAGCACA GAG TGTGCTTCGA TTGTTTTTCCTTGCA putP 1610789 - 1612360 + | sodium/proline symporter HQ2371A 1613028 - 1613597 + | hypothetical protein uspA 1614345 - 1613836 - | stress response protein TERM 787 1614570 - 1614584 + H 75 -11.4 -3.05384 | opp_overlap 1614581 GCCTCGACCTACTCA GCCGTC AGA GACGGC TTCGGTGAGGACGGG HQ2373A 1614971 - 1615648 + | regulatory protein PrrC trxA 1615645 - 1616262 + | thioredoxin ccdA 1616393 - 1617091 + | cytochrome C biogenesis protein/thiol-disulfide transporter TERM 788 1618073 - 1618054 - f 78 -6.4 -4.63527 | gap 1, overlap 1618055 1618056 TGAGCAGGCGAAAAA CCTCGCCCC TCA GGGG-GAGA AATGCCAAGTGTTTG mobA 1618138 - 1618773 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 789 1619188 - 1619208 + T 75 -9.7 -3.53811 | ACTCCCGGAGTTGGT TGTGCCGGA GAA TCCGGCAGA TTTCGACAGACTCGA HQ2377A 1619862 - 1619635 - | hypothetical protein HQ2378A 1620084 - 1620404 + | hypothetical protein ugpQ 1621160 - 1620441 - | glycerophosphodiester phosphodiesterase TERM 790 1621058 - 1621071 + g 73 -8.1 -4.07885 | ATTCAACCGCACCGG CGCTG CTTC CAGCG TTTTGAAGCGCCCTG HQ2380A 1621979 - 1621281 - | short chanin dehydrogenase/ reductase TERM 791 1621533 - 1621518 - G 72 -10.4 -2.97021 | overlap 1621513 1621511 TTTTGAAACACGATA TGGCGG TGAG CCGCCA TCCATCCCCGGACCG HQ2381A 1623485 - 1622028 - | beta,beta-carotene 15,15'-monooxygenase; beta-carotene dioxygenase 1 guaB 1625174 - 1623675 - | IMP dehydrogenase 1 HQ2383A 1625365 - 1625631 + | hypothetical protein TERM 792 1626153 - 1626166 + G 73 -9.5 -3.40601 | overlap 1626155 AATTGCACAGGCAGT CGCCG CCGC CGGCG TTGGTGTTGGGTTTG HQ2384A 1625638 - 1626555 + | hypothetical protein HQ2385A 1626801 - 1627034 + | hypothetical protein HQ2386A 1627477 - 1627620 + | hypothetical protein HQ2387A 1628226 - 1627672 - | hypothetical protein HQ2388A 1629176 - 1628532 - | hypothetical protein TERM 793 1629468 - 1629458 - R 79 -4 -5.20154 | ATACAATCCAAAAAA TGAT GCC ATCA TACGATGAGTGAATA TERM 794 1629933 - 1629949 + r 74 -11.5 -2.76696 | opp_overlap 1629916, overlap 1629932 CTGACCTACCGCGCT CGGGGCT ATC GGCCCCG CTTGTTGAGGACAGG acd 1631699 - 1630545 - | acyl-CoA dehydrogenase TERM 795 1632961 - 1632983 + G 77 -4.8 -5.00467 | TACTTAGATGGGGCT GTAACTGGCG GAA CGGGAGTTAC TTTTCTTGTTCTTGG TERM 796 1633260 - 1633278 + G 76 -8.2 -4.10731 | GGCGATTGGCTATGC GATCATGA ATC TCGTGATC TTTGCTTATGTTATT HQ2390A 1632082 - 1633575 + | transport protein ( polysaccharide biosynthesis transport protein) TERM 797 1634364 - 1634343 - g 73 -5.1 -4.56775 | ACTGGCTGCGAAAAA TGCCAATCG TGAA CGACCGACA TATCTTCCATGAATT apa 1633915 - 1634376 + | bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (diadenosine tetraphosphatase) TERM 798 1635785 - 1635751 - g 85 -7.3 -4.86621 | gap 2, overlap 1635755 AGCTCGAATCAAAAA GTTACTCGCGACGCG TCGTGAG CGCGT-GCGAG-AAC GCGAAGTATCGGATT HQ2392A 1634627 - 1635895 + | hypothetical protein HQ2393A 1636707 - 1636027 - | hypothetical protein fadA 1636937 - 1637713 + | enoyl-CoA hydratase I rpoM1 1638359 - 1638682 + | DNA-directed RNA polymerase subunit M1 HQ2397A 1638765 - 1639337 + | hypothetical protein HQ2398A 1640218 - 1639469 - | methyltransferase nac 1640592 - 1640215 - | nascent polypeptide-associated complex protein TERM 799 1640657 - 1640645 - H 76 -4.7 -4.8048 | TGCTGATAGCAAAAA CGTGG CGA CCGCG ACCGGCAAGATCAAA TERM 800 1640696 - 1640708 + H 74 -10.5 -3.18118 | overlap 1640694 GTTGGGTAGTTATCT CCCGG TAT CCGGG TCTATTATCGAATAA mcmA 1640831 - 1642501 + | methylmalonyl-CoA mutase, subunit A TERM 801 1642720 - 1642700 - f 80 -12.7 -3.01712 | opp_overlap 1642694 CGGTTCGCTCGAACA CCAGAAATC TCC GATTTCTGG GGACGTTTCTTCGGA glo 1643093 - 1643482 + | lyase / dioxygenase ( lactoylglutathione lyase, aromatic compounds dioxygenase) TERM 802 1643530 - 1643542 + F 71 -7.7 -3.87815 | AAGCCGCTTTCTTGA CAGGA GTT TCCTG TTTCTACAGATAGCA TERM 803 1644471 - 1644441 - g 80 -7 -4.56358 | overlap 1644446 1644469 GACAGCGATAGAAAA TGACATATCCATTA TTT CAATGGATAAATCA ACAATTGACTCGGTT TERM 804 1644876 - 1644892 + G 78 -12.3 -2.73309 | overlap 1644875 1644872 CAATAAATCTTCATT TCCGGAG ACG CTCCGGA CTGTTCTTCTTGGCG menE 1644079 - 1645599 + | O-succinylbenzoic acid--CoA ligase HQ2403A 1646731 - 1645871 - | phosphoesterase HQ2404A 1648954 - 1646909 - | hypothetical protein TERM 805 1648516 - 1648533 + g 73 -10.5 -3.15663 | TTCCAATGCGGCGAA GCGTCGC CTGT GCGGCGC TTACTGCCCATCGAT rpa 1650237 - 1648951 - | replication factor A HQ2406A 1650391 - 1651644 + | permease padR 1652011 - 1651718 - | transcription regulator TERM 806 1652392 - 1652355 - H 100 -16.3 -4.323 | gap 1, opp_overlap 1652348 TTCAAACATTCAAAA CGGAAAGCAGCCCGCGTA AAT CACGCGGGC-GCCTGCCG TCTAAAATTGGTCCC TERM 807 1652615 - 1652599 - g 71 -10.1 -2.89191 | TCATACTTTGACACA GGACAGG TTG CCTGCCC AGCATGTGGTAGTCT HQ2408A 1652536 - 1653318 + | hypothetical protein HQ2409A 1654769 - 1653579 - | hypothetical protein HQ2410A 1655337 - 1654888 - | hypothetical protein HQ2411A 1655524 - 1656981 + | hypothetical protein rspA 1657146 - 1658384 + | molecular chaperone P45 HQ2413A 1659283 - 1658549 - | hypothetical protein TERM 808 1659575 - 1659626 + r 83 -10 -4.14511 | gap 1 TCATCTGCAGCCATG TCCGACTGGGTGGCATCCTGCTCAA TGC TTG-GCGGGTAGACACCCCGGCGGA TTTTAAGATCAGATT fer 1659879 - 1659556 - | ferredoxin TERM 809 1660236 - 1660224 - R 84 -4.8 -5.3104 | TGATCAAAAAGAAAA GCCA TCGTG TGGC AGTCACCGCAATAGC HQ2415A 1660623 - 1660201 - | hypothetical protein ubiE 1661381 - 1660863 - | menaquinone biosynthesis methyltransferase UbiE HQ2417A 1661692 - 1662366 + | hypothetical protein TERM 810 1663470 - 1663485 + G 78 -9 -3.97307 | GTTCATTCAGCATGC TGACCG TGTG CGGTCA TTATTCTTGGATCCA rad2 1662685 - 1663665 + | flap endonuclease-1 HQ2419A 1665105 - 1664962 - | IS1341-type transposase HQ2420A 1665679 - 1665203 - | IS1341-type transposase TERM 811 1665542 - 1665567 + g 88 -11.9 -3.91084 | opp_overlap 1665550 1665551 GATCTTACTCCAGTC CCAACCAACTC GACC GAGTCGGTTGG TTTCGTTGCGGATGC HQ2421A 1665781 - 1666086 + | hypothetical protein HQ2422A 1667192 - 1666284 - | hypothetical protein ptpS 1667599 - 1667195 - | 6-pyruvoyltetrahydropterin synthase tdh 1668933 - 1667860 - | oxidoreductase ( Zn-dependent dehydrogenases, threonine 3-dehydrogenase) gch3 1669996 - 1669136 - | GTP cyclohydrolase III aslA 1670319 - 1671749 + | arylsulfatase HQ2429A 1672106 - 1671867 - | hypothetical protein arsA 1673260 - 1672322 - | transport ATPase ( substrate arsenite) HQ2431A 1675151 - 1673583 - | deoxyribodipyrimidine photolyase-related protein TERM 812 1675045 - 1675022 - G 85 -8 -4.78572 | CCTCAATCAACAAAA CACGGGATCC AGAA GGTGCCCGTG CAAGCGGACCAACAT rnhA 1676094 - 1675429 - | ribonuclease H I HQ2434A 1676308 - 1676820 + | transcription regulator HQ2435A 1677324 - 1677623 + | hypothetical protein HQ2437A 1678996 - 1678517 - | hypothetical protein TERM 813 1681326 - 1681344 + G 74 -3.9 -4.87626 | gap 1, overlap 1681330 AGCAATGGCGAGTCG TGAACTCC TTGC GGAGT-CA TTTTTCCTATTAGCA HQ2439A 1680193 - 1681452 + | major facilitator superfamily transporter HQ2440A 1681753 - 1682649 + | transporter of the drug/metabolite transporter (DMT) superfamily sdhA 1684536 - 1682728 - | succinate dehydrogenase, subunit A (flavoprotein) TERM 814 1684709 - 1684688 - H 79 -8.9 -4.12532 | CCGTCCACAGATAAA TATGTAGTA TTGA TACTACATA ATAAATCAGAAAAAC HQ2442A 1684767 - 1685273 + | hypothetical protein HQ2443A 1685585 - 1685367 - | hypothetical protein HQ2444A 1685962 - 1685849 - | hypothetical protein trxB 1687492 - 1686902 - | thioredoxin reductase-like protein TERM 815 1688302 - 1688248 - R 71 -7.7 -3.86283 | gap 1, opp_overlap 1688247 1688250 1688255 GGAATCCAGATCAAA GCCCCATCCCTCACTGAGCGAACCGC GTAT GCGGTGAGCGAAGT-AGGGTTGGGTC GTTTACATGAGGACG HQ2447A 1689345 - 1688692 - | hypothetical protein TERM 816 1689664 - 1689644 - H 72 -2.6 -5.07107 | gap 2, opp_overlap 1689648, overlap 1689647 CAAATTGTCAAAAAA GAGC--CCCA GAT TGGGATGCTC CGTTTGGGATTTGAA oxr 1689858 - 1690607 + | oxidoreductase HQ2449A 1691057 - 1690758 - | hypothetical protein TERM 817 1690853 - 1690836 - G 79 -11.3 -3.55563 | ACCGCACCTGTCAAA CTCGTCG TTGC CGACGAG CACCGCGACGACCTC TERM 818 1692024 - 1692009 - g 71 -4.6 -4.4891 | opp_overlap 1692009, overlap 1692011 GGGAGTATGATAAAA CGGGTG GATA CACCGG TATATAACGCTATCG rbsB 1691094 - 1692227 + | ABC-type transport system, substrate-binding protein rbsA 1692289 - 1693887 + | ABC-type ribose transport system, ATP-binding protein rbsC1 1694022 - 1695113 + | ABC-type ribose transport system, permease protein rbsC2 1695106 - 1696227 + | ABC-type ribose transport system, permease protein psmA2 1698641 - 1697898 - | proteasome subunit alpha folA 1699488 - 1698901 - | dihydrofolate reductase thyA 1700498 - 1699488 - | thymidylate synthase TERM 819 1700676 - 1700662 - H 71 -3.5 -4.80455 | TATCCAAACAGAAAA GCCGA AACCA TCAGC GGTTGAAGACGCAAT HQ2457A 1700692 - 1701267 + | hydrolase HQ2458A 1701977 - 1701675 - | hypothetical protein HQ2459A 1703123 - 1703278 + | hypothetical protein TERM 820 1703520 - 1703500 - T 83 -14 -2.71731 | opp_overlap 1703491 1703489 TGGATGTGTGAAGTA CCTCGGGG TCAAG CCCCGAGG CTTCACCGTTTGGGG TERM 821 1704195 - 1704176 - T 72 -9.3 -3.53012 | opp_overlap 1704162 1704185 1704186 GCGGGTTCTGCTAAA TGAGCCC GCTTCG GGGCTCA TTCAGCACCGAGTTC HQ2460A 1705623 - 1704193 - | Tn5-like transposase TERM 822 1704352 - 1704374 + g 73 -10 -3.3514 | ATCTTGACCGCTCAA TTCTGGAAAT TTC GTTTCCAGAA TTGTGCGCTCTGCCT TERM 823 1704621 - 1704661 + g 88 -14.3 -2.73875 | gap 2, opp_overlap 1704589 1704617, overlap 1704619 TTTCCTCAAACTCTT CGA-CCGATTCAGT-GGTG AGCAA CACCCACTGAATCGGGTCG TCATCTTCACCGACC TERM 824 1705117 - 1705157 + g 85 -13.4 -2.75712 | gap 1, overlap 1705114 GTACTTCTCATCGGC CTGCTGGTCCTCGATCAGC GGCT GCTGATCGATGACCC-CAG TCATTCGATGGGTCC TERM 825 1705979 - 1705946 - R 72 -8.9 -3.53745 | gap 1, opp_overlap 1705946 1705978, overlap 1705960 GACATTCCAAATCAA CGTCGTC-CGAGAGAC GAA GTCTCTCGCGATCACG AAAATCTTCGATTTT sod 1706833 - 1706234 - | superoxide dismutase HQ2462A 1707009 - 1707437 + | hypothetical protein phr 1709989 - 1708553 - | deoxyribodipyrimidine photolyase HQ2464A 1710731 - 1710015 - | hypothetical protein TERM 826 1710803 - 1710750 - R 75 -3.2 -5.1101 | gap 2, opp_overlap 1710800, overlap 1710752 1710753 TCACCATGCAAAAAA TATGG-ACTAGAGTGGCAG-CAAGTA CCCC TACCCGACTGCCCCTCCAGTACCCGA TATGTTGGTTTCCAT TERM 827 1710799 - 1710753 - R 70 -9.5 -3.09842 | gap 1, overlap 1710752 1710750 CCATGCAAAAAATAT GGACTAGAGTGGCAG-CAAGTA CCCC TACCCGACTGCCCCTCCAGTAC CCGATATGTTGGTTT TERM 828 1710864 - 1710846 - R 71 -9.6 -3.28791 | opp_overlap 1710846 1710835 AGTTTTCTCGTACAA TACAGCAG TAA CTGCCGTA TTGTGCACAGGGTTT folP 1712112 - 1710904 - | dihydropteroate synthase HQ2466A 1712703 - 1713287 + | hypothetical protein HQ2467A 1713297 - 1714295 + | tRNA/rRNA methyltransferase gatE 1716282 - 1714357 - | glutamyl-tRNA(Gln) amidotransferase subunit E TERM 829 1716726 - 1716747 + r 95 -12.9 -3.96148 | overlap 1716727 1716735 1716739 GGGTTGTCGGATTCA TCCCCGCCG TGAA CGGCGGGGC TTTCTCCTCGCACCG TERM 830 1716727 - 1716746 + r 100 -16.4 -2.97475 | overlap 1716726 1716735 1716739 GGTTGTCGGATTCAT CCCCGCCG TGAA CGGCGGGG CTTTCTCCTCGCACC fumC 1718629 - 1717175 - | fumarate hydratase bolA 1719373 - 1719104 - | morphology/transcription regulator BolA family protein HQ2474A 1719870 - 1719517 - | hypothetical protein TERM 831 1719744 - 1719734 - G 70 -2.4 -4.89477 | overlap 1719735 GTCCCAACAAGAAAA GCGG TAT CAGC AGCTGTTGGGATACC TERM 832 1720107 - 1720127 + r 70 -4.7 -4.50761 | gap 1, overlap 1720115 TCTATCCGATTCAAT CCG-TGGG ATGAAC CCCAGCGG TTTATTTGGCTTAGT dppC 1721239 - 1720301 - | ABC-type dipeptide/oligopeptide/nickel transport systems, permease protein dppB 1722435 - 1721392 - | ABC-type dipeptide/oligopeptide/nickel transport systems, permease protein dppA 1724305 - 1722578 - | ABC-type dipeptide/oligopeptide/nickel transport system, substrate-binding protein TERM 833 1723659 - 1723671 + g 75 -7.7 -4.208 | AGTTGTACCTGATTG TCGAG TGA CTCGA TTTGTGATTTTGAGA dppDF 1727054 - 1724472 - | ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein I & II TERM 834 1724811 - 1724823 + g 70 -7.7 -3.81691 | CACACGACGGTTTTC TCCAC TGA GTGGA TTATTGATATATCTT HQ2479A 1727252 - 1727881 + | hypothetical protein HQ2480A 1728489 - 1728073 - | hypothetical protein TERM 835 1729297 - 1729283 - g 93 -6.4 -5.40072 | TTGCCTGTAAAAAAA CACCAC GAT GTGATG AGGCTAATTGCCCGT mutY 1728652 - 1729665 + | A/G-specific adenine glycosylase HQ2483A 1730467 - 1730318 - | IS200-type transposase (nonfunctional,N-terminal part) HQ2484A 1730527 - 1730661 + | hypothetical protein TERM 836 1731034 - 1731001 - g 91 -12.5 -3.92324 | overlap 1731003 TTCTCGAAGACGAAA CAGTACGGTTCCGCA TCAG TGCGAAACCGTACAA CCACGTCAAAGGCGA TERM 837 1731032 - 1731003 - g 100 -17.3 -3.55084 | overlap 1731001 CTCGAAGACGAAACA GTACGGTTCCGCA TCAG TGCGAAACCGTAC AACCACGTCAAAGGC HQ2485A 1730658 - 1731980 + | IS1341-type transposase TERM 838 1731989 - 1731967 - f 100 -14.8 -3.6579 | overlap 1731954 1731958 AATCCACGGGAAGAA GCCCCGGGGC TTG ACCCCGGAGC AGTTCACCGATGCAT TERM 839 1732137 - 1732147 + F 72 -5.4 -4.50988 | CTTCCACTATCACTA TGTG ACA CACA TTCTTTTTACTGTGG HQ2486A 1732347 - 1732460 + | hypothetical protein TERM 840 1733001 - 1732959 - T 90 -7 -5.36441 | gap 1, opp_overlap 1732964 1732998, overlap 1732994 CCGTCAGATAAAAAA GCACTCCTGAGTCTCCGGT CGGTTT ACCTGAGAA-CGGGAGTGC CGGCTTGGCACAGCC cinA 1733968 - 1733261 - | CinA-like domain-containing protein HQ2489A 1734866 - 1734060 - | hypothetical protein HQ2490A 1735920 - 1735000 - | hypothetical protein tfeA 1736450 - 1735920 - | transcription initiation factor IIE alpha subunit-like protein HQ2492A 1737202 - 1736621 - | tRNA 2'-O-methylase TERM 841 1736781 - 1736767 - G 74 -2.8 -5.1356 | opp_overlap 1736779, overlap 1736768 GTCGATCAAGAAAAA CTGCAA GCC CTGCAA CCTCCGAATGTGGTT TERM 842 1737952 - 1737962 + G 83 -6.8 -4.90266 | TGATATACCTGATCT CCGT GGC ACGG TTTTTAATTGCTCAG dadA 1737440 - 1738525 + | glycine/D-amino acid oxidases (deaminating) galE 1738612 - 1739637 + | nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) HQ2496A 1740203 - 1741096 + | hypothetical protein HQ2497A 1741307 - 1741810 + | glycine-rich protein iunH 1743098 - 1742112 - | inosine-uridine preferring nucleoside hydrolase TERM 843 1743276 - 1743264 - R 76 -9.1 -3.68529 | opp_overlap 1743266 1743267, overlap 1743267 ATTGTATCATCTAAA CGACC ACG GGTCG GGTGACCCGTGGCTT TERM 844 1743266 - 1743289 + r 100 -12.4 -4.55491 | opp_overlap 1743264 1743267, overlap 1743267 TGTATCATCTAAACG ACCACGGGTC GGGT GACCCGTGGC TTTTCTAATTCCCTC TERM 845 1743267 - 1743288 + r 100 -15.9 -3.32572 | opp_overlap 1743264 1743267, overlap 1743266 GTATCATCTAAACGA CCACGGGTC GGGT GACCCGTGG CTTTTCTAATTCCCT TERM 846 1743288 - 1743267 - R 93 -15.9 -2.95116 | opp_overlap 1743267 1743266, overlap 1743264 GTATCATCTAAACGA CCACGGGTC GGGT GACCCGTGG CTTTTCTAATTCCCT HQ2499A 1744603 - 1743308 - | hexosyltransferase TERM 847 1744288 - 1744276 - G 76 -9.1 -3.84915 | GATATGAAGCAATAA GCGGA ACG TCCGC GCGACGAGCCAACCG HQ2500A 1745948 - 1744704 - | hexosyltransferase 1 TERM 848 1744993 - 1745013 + g 78 -5.5 -4.90477 | CCACAGGCCATCGCC TCAAGGA CCGCAAT TCCTTGA TTTTCATTTTTTGTC rnp4 1746121 - 1746399 + | ribonuclease P protein component 4 HQ2502A 1746491 - 1746742 + | hypothetical protein mscS 1746739 - 1747659 + | mechanosensitive channel HQ2504A 1748472 - 1747654 - | hypothetical protein TERM 849 1748950 - 1748935 - H 80 -6.8 -4.59944 | ACGACCACAAATAAA CGAGTC AACT GACCCG TGGAACTCTCGCTCT TERM 850 1749243 - 1749269 + H 71 -3.6 -4.90013 | CTGGGGAGTATGTTT TCGCCGTCATGG ACA CAGTAATGGCGA TTTTTCATTCCATTC tatA 1749569 - 1749847 + | sec-independent protein translocase component TatA norM 1750546 - 1752051 + | sodium-driven multidrug efflux pump HQ2507A 1752273 - 1752767 + | hypothetical protein HQ2508A 1753851 - 1752805 - | LPS glycosyltransferase TERM 851 1754537 - 1754547 + H 72 -3.2 -4.946 | TCGACTGCCCGATGT GAGG CTT TCTC TTTTTCGTCTTTGAT TERM 852 1755335 - 1755312 - H 95 -12.4 -3.84961 | opp_overlap 1755311 1755313, overlap 1755313 GAGGGAATTAGGAAA GCCACGGGTC GGGT GACCCGTGGT CGTTTACGCCCCGAT TERM 853 1755313 - 1755334 + H 93 -15.9 -2.90496 | opp_overlap 1755312 1755313, overlap 1755311 AGGGAATTAGGAAAG CCACGGGTC GGGT GACCCGTGG TCGTTTACGCCCCGA TERM 854 1755334 - 1755313 - H 93 -15.9 -2.90494 | opp_overlap 1755313 1755311, overlap 1755312 AGGGAATTAGGAAAG CCACGGGTC GGGT GACCCGTGG TCGTTTACGCCCCGA ribG 1755475 - 1756164 + | hypothetical protein trxA 1756249 - 1756587 + | thioredoxin HQ2512A 1757468 - 1757740 + | hypothetical protein HQ2513A 1757733 - 1758296 + | hypothetical protein HQ2514A 1758352 - 1758663 + | hypothetical protein HQ2515A 1758828 - 1759088 + | IS1341-type transposase-like protein HQ2516A 1759219 - 1759431 + | hypothetical protein TERM 855 1759492 - 1759504 + F 74 -3.3 -5.00616 | opp_overlap 1759492 TATCCTTCGTAATTA CCTGC CAG GGAGG TTTTTTACCACAGAG TERM 856 1759844 - 1759834 - g 70 -2.4 -4.91987 | opp_overlap 1759834 AATGCAAGAACAAAA GCGG AAA CAGC TAATTAACCAAATCG HQ2517A 1759535 - 1760260 + | putative RNA-associated protein TERM 857 1760368 - 1760414 + F 77 -7.3 -4.54727 | gap 2, opp_overlap 1760372, overlap 1760358 GGAGCGCGCGCCGGA GACA-CGCTTGATCCCCG-CCTA CGG TGGGTCGTGGAACACGCGCTGTC TTTTCATTTAGAAAC HQ2518A 1760453 - 1760857 + | hypothetical protein HQ2519A 1761405 - 1761085 - | TP rich cell surface protein viral Tpx HQ2520A 1762713 - 1761679 - | hypothetical protein HQ2521A 1763175 - 1764491 + | major facilitator superfamily transporter quinolone resistance protein HQ2522A 1764769 - 1765401 + | protein N-acetyltransferase-like protein pssA 1765487 - 1766188 + | CDP-diacylglycerol--serine O-phosphatidyltransferase (phosphatidylserine synthase) HQ2524A 1766380 - 1767144 + | hypothetical protein HQ2525A 1767258 - 1767647 + | hypothetical protein HQ2526A 1767644 - 1768417 + | hypothetical protein TERM 858 1769521 - 1769484 - f 79 -10 -3.68302 | overlap 1769475 TTAATAGGCGAACAA CCT-CACCCTTGCCTGCG TCTG CACAGGC-AGGATGGAGG GAACCGACATCGAGG TERM 859 1769798 - 1769808 + F 72 -8.2 -3.73042 | overlap 1769797 CCCCAGTCAAACTGC CCGG CTA CCGG TGTTTTCCTCCCGGA TERM 860 1770498 - 1770513 + F 79 -11.8 -3.24021 | overlap 1770493 1770491 GATTCCATGATTCGA CGGGGC GATG GCCCCG TTCACTGTTTCCGAA TERM 861 1770663 - 1770681 + F 74 -10.2 -3.1829 | overlap 1770661 CTTGCTCGTTAGGCC GTCGGGGG TCA CACCCGAC TATTGCTGCTACTGT TERM 862 1773703 - 1773721 + F 73 -11 -2.71791 | overlap 1773694 1773702 GTTTCCGTCGGACGC CCACTCGT TGG GCGAGTGG ATTTCCCGACGGACT TERM 863 1773885 - 1773865 - f 84 -10.4 -3.83998 | opp_overlap 1773854 CTACGGTACACGAAA GCGAGGAC GATAT GCCCTCGC ACTCGGAGTCCCCTT tbpE 1775266 - 1775826 + | transcription factor TERM 864 1776153 - 1776142 - g 75 -5.8 -4.63218 | CCCGGTCGAATAAAA CCGA AACA TCGG ATAGACTTTCTACGG rhl 1776036 - 1778114 + | DNA repair helicase HQ2529A 1778899 - 1778375 - | hypothetical protein HQ2530A 1781100 - 1780738 - | hypothetical protein btpA 1782915 - 1782244 - | photosystem I biogenesis protein HQ2532A 1783346 - 1783035 - | hypothetical protein lysE 1784299 - 1783667 - | LysE family transporter TERM 865 1784090 - 1784076 - G 71 -6.4 -4.15044 | CCGGCTCCGAATAAA GTGGTC TGT AACCAC GAAAATTCAATCACT TERM 866 1785108 - 1785131 + G 75 -7.6 -4.28323 | gap 1, opp_overlap 1785107 TTTCTCCGGACAATC CTGCTGGTTAT GAG ATAAC-AGCAG TTTGTATTGATTCAT HQ2534A 1784609 - 1785748 + | hypothetical protein HQ2535A 1787189 - 1785849 - | hypothetical protein TERM 867 1788319 - 1788357 + G 76 -11.2 -3.25823 | gap 1, opp_overlap 1788330 1788332 TGGACCAGCGGGTTG GGTCAACGACACAGAAC GGAACG GTTCTGGGT-GTTGACC TTGGTGTCAACCAGA HQ2536A 1787751 - 1788953 + | IS1341-type transposase ferA_5 1789554 - 1789084 - | ferredoxin HQ2538A 1790832 - 1790353 - | hypothetical protein sga1 1795459 - 1790912 - | glucoamylase TERM 868 1792450 - 1792414 - G 73 -9.6 -3.31144 | opp_overlap 1792420, overlap 1792417 CTCTGAGTGTCATAA GACTGACCCGATACT-GC GAA GCGAGTGTCGGGTCA-TC TGCGACAGAATCTGG TERM 869 1792448 - 1792417 - G 78 -12.4 -2.53271 | gap 1, opp_overlap 1792420, overlap 1792414 TGAGTGTCATAAGAC TGACCCGATACT-GC GAA GCGAGTGTCGGGTCA TCTGCGACAGAATCT TERM 870 1793008 - 1792996 - G 80 -9.1 -4.22652 | TGACATCAGCTAAAA GCGCA TCG TGCGC AGGATCGCTCGCGTA TERM 871 1793768 - 1793726 - G 93 -12.8 -3.80014 | opp_overlap 1793726 AGAGTCATCATCAAA TCGAACAAGTCCAGCAACAG CAT CCGTCTCTGAGCTTGTTCGA TATAGTGCGCGCAAC TERM 872 1795414 - 1795427 + g 76 -9.5 -3.76048 | CCTCAGGAAATTGCC GCGCG CGGT CGCGC TTGTATTCGTTCAGC TERM 873 1795950 - 1795937 - g 73 -9.5 -3.35438 | GATGATACGGTAGAA CGCGG GCGA CCGCG GATTCAACTTCAGGG amyA 1795553 - 1797691 + | glucan 1,4-alpha-maltohydrolase TERM 874 1798264 - 1798225 - f 95 -12.1 -3.86944 | gap 2, opp_overlap 1798225, overlap 1798217 CGTAGAAGCAGGAAA CCCCGCCCTCAGCGAGGCC GTCA GGCCGAGC--AGGGCGGGG TAGTTCACAGAGATT TERM 875 1798225 - 1798264 + F 76 -12.1 -2.71263 | gap 2, opp_overlap 1798217 1798225 CGTAGAAGCAGGAAA CCCCGCCCTCAGCGAGGCC GTCA GGCCGAGC--AGGGCGGGG TAGTTCACAGAGATT HQ2541A 1798375 - 1798632 + | transposase (fragment) HQ2542A 1801161 - 1798795 - | membrane protein sfuC 1802507 - 1801197 - | ABC-type spermidine/putrescine/iron transport system, ATP-binding protein sfuB 1804170 - 1802545 - | ABC-type iron(III) transport system, permease protein TERM 876 1803399 - 1803372 - G 86 -7.8 -4.95155 | overlap 1803373 1803397 GCCAGAGTATAAAAA GTGTCACTGCAA CCAA TTGCAATGACAG CAGTGTCGCTGTGTC TERM 877 1803398 - 1803373 - G 79 -11.3 -3.5637 | overlap 1803372 1803397 CCAGAGTATAAAAAG TGTCACTGCAA CCAA TTGCAATGACA GCAGTGTCGCTGTGT sfuA 1805473 - 1804268 - | ABC-type iron(III) transport system,substrate-binding protein HQ2546A 1806795 - 1805611 - | hypothetical protein TERM 878 1806446 - 1806427 - G 74 -2.8 -5.00884 | gap 1, overlap 1806429 ATGTCGGGCAAAAAA GTCC-CACT CTG AGTGCGGTC GGGTGTCATCGTCGA TERM 879 1807001 - 1807022 + G 79 -11.5 -3.16881 | CCATATTGTTCAATC GCCGCACGA GCAC TCGAGCGGC TTGATGCAGTCGGTG HQ2547A 1806944 - 1807366 + | hypothetical protein TERM 880 1807377 - 1807393 + F 82 -3 -5.49234 | gap 1, overlap 1807380 CTTGATATTCTTCAC GCGCTGA AGAT TCAG-GC TTTTTTGTTGACTCT HQ2548A 1807505 - 1808011 + | endonuclease associated protein TERM 881 1808492 - 1808464 - g 81 -12.5 -3.06183 | opp_overlap 1808461 TGCATTCGCAGTCAA GTCAGCGAGTCCT TCA AGAACTCGCTGAA GCGTTCCGTGGATGG HQ2549A 1808238 - 1809518 + | IS1341-type transposase glcD 1813102 - 1809992 - | oxidoreductase ( glycolate oxidase iron-sulfur subunit) TERM 882 1812691 - 1812666 - G 71 -8.3 -3.64703 | gap 1, opp_overlap 1812661 1812673, overlap 1812667 1812669 1812673 GCTGCTGCATTCAAA TCACCAAGCCGG ACA CCGGCTTG-TGC AGTTGCTGTTTCGTT TERM 883 1812690 - 1812667 - G 76 -11.8 -2.78679 | gap 1, opp_overlap 1812661 1812673, overlap 1812666 1812669 1812673 CTGCTGCATTCAAAT CACCAAGCCGG ACA CCGGCTTG-TG CAGTTGCTGTTTCGT TERM 884 1812689 - 1812669 - G 74 -11.1 -2.94144 | opp_overlap 1812661 1812673, overlap 1812667 1812666 1812673 GCTGCATTCAAATCA CCAAGCCGG ACA CCGGCTTGT GCAGTTGCTGTTTCG TERM 885 1812685 - 1812673 - G 75 -10.5 -3.33483 | opp_overlap 1812661 1812673, overlap 1812669 1812667 1812666 CATTCAAATCACCAA GCCGG ACA CCGGC TTGTGCAGTTGCTGT TERM 886 1812673 - 1812685 + g 75 -10.5 -3.37732 | opp_overlap 1812673 1812669 1812667 1812666, overlap 1812661 CATTCAAATCACCAA GCCGG ACA CCGGC TTGTGCAGTTGCTGT TERM 887 1813806 - 1813835 + G 75 -10.1 -3.3785 | gap 1, overlap 1813807 GTTCATTCATTGAGG GTGCTGCTGG-GTT CGG AACACCAGCAGCAA TTGTCGGTCCGTTGC TERM 888 1813807 - 1813834 + G 84 -13.6 -2.62389 | gap 1, overlap 1813806 TTCATTCATTGAGGG TGCTGCTGG-GTT CGG AACACCAGCAGCA ATTGTCGGTCCGTTG TERM 889 1814039 - 1814064 + G 72 -10.5 -2.97166 | opp_overlap 1814028, overlap 1814029 AGCACTGGAGCGTAT GTCGCTCAAAT TGGT ATTTGGGCGGC TCTCATTCATTCAAT lctP 1813451 - 1815229 + | L-lactate permease TERM 890 1815707 - 1815685 - f 71 -7.7 -4.01137 | opp_overlap 1815687 GACAGAACTGACAAA CCCACTCTC ACTGA GAGAGTCGG TTCAGAGCGGTTCCG HQ2552A 1816101 - 1817162 + | hypothetical protein HQ2553A 1817159 - 1817773 + | hypothetical protein HQ2554A 1818137 - 1818565 + | hypothetical protein HQ2555A 1818692 - 1819120 + | hypothetical protein TERM 891 1819277 - 1819313 + T 70 -9.4 -3.30771 | overlap 1819279 GGGTTCGGGTGCGGG TGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTA TTCTCGACCATATAC TERM 892 1819279 - 1819311 + T 71 -9.8 -3.22102 | overlap 1819277 GTTCGGGTGCGGGTG GGACTGCTGGCGGT GCCAA GCCGCCGGTACTCC TATTCTCGACCATAT TERM 893 1819640 - 1819659 + T 85 -13.6 -3.04792 | CGTGACGGCGCGTAT CCACGGTC TGAA GACCGTGG TATTGCGCCTGCTCA cysK 1821747 - 1820617 - | cysteine synthase TERM 894 1821987 - 1822035 + H 70 -8.8 -3.30771 | overlap 1821990 1821990 1821992 TGAGGCGGGTGCGGG TGCGGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCCTA TTCTCGACCATATAC TERM 895 1821990 - 1822033 + H 74 -10.3 -3.22102 | gap 1, overlap 1821987 1821990 1821992 GGCGGGTGCGGGTGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTCTCGACCATAT TERM 896 1821990 - 1822032 + H 78 -12.7 -2.5294 | overlap 1821990 1821987 1821992 GGCGGGTGCGGGTGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTCTCGACCATA TERM 897 1821992 - 1822030 + H 77 -11.7 -2.80074 | overlap 1821990 1821990 1821987 CGGGTGCGGGTGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTCTCGACCA TERM 898 1822469 - 1822488 + H 75 -11.4 -3.04792 | CGTGACGGCGCGTAT CCACGGTC TGAA GGCCGTGG TATTGCGCCTGCTCA trxA 1823206 - 1823595 + | thioredoxin HQ2558A 1823706 - 1823882 + | hypothetical protein HQ2559A 1826414 - 1824108 - | thioredoxin domain-containing protein TERM 899 1824766 - 1824784 + g 75 -10.4 -3.33696 | GTTTCACCCGCAGCG TCGTAGAA CAG TTCTACGA TTGATTCAGCAAGCG TERM 900 1824863 - 1824853 - G 71 -4.6 -4.65153 | TGATATAAATCAAAA GCAC CAC GCGC GAGGAATGCATAATC TERM 901 1826621 - 1826611 - H 76 -4 -5.02439 | ATACAACGACAAAAA GTAA GCT TTAC ACACTCGTGTGGACC purD 1826647 - 1827951 + | phosphoribosylamine--glycine ligase HQ2561A 1828170 - 1828688 + | acetyltransferase-like protein TERM 902 1828759 - 1828741 - T 88 -12.4 -3.55789 | overlap 1828739 AATACAAAGAGAATA CCTGCGAC TTA GCCGCAGG ATGAATCCGGCAATT TERM 903 1828890 - 1828869 - T 82 -13 -2.79952 | opp_overlap 1828872 1828885, overlap 1828866 1828861 ATAGGAAGTGAAGTA CCACGGGC GCGGTG GCCCGTGG CTTCGCCGTGGTCTC TERM 904 1829093 - 1829130 + T 71 -7 -4.07687 | gap 1, opp_overlap 1829090 1829092, overlap 1829092 GGGCGCGACACAGAC CCGGCGCACCGCGTCTT ACCCC AAAATG-GGTGCGCGGG TTTTGCGAGGCCGAT TERM 905 1829206 - 1829254 + T 75 -6.6 -4.54727 | gap 2, opp_overlap 1829193, overlap 1829208 ATGGGACGCAGCCGA GC-GTACGAGCTTCAC-CCCCGCC CAC GGTGGGGCGGGGAACTCGCGCTGC TTTTCGTTTAGACCG msc 1830561 - 1829767 - | mechanosensitive ion channel HQ2563A 1831388 - 1830573 - | hypothetical protein TERM 906 1831716 - 1831751 + H 71 -7.6 -3.9941 | gap 1, overlap 1831717 TTAGTCGTGCTCTAT C-GTGTCAGCTATGCGA TTC TCTCACGGCTGACACTG TTTGCTTCTCAAGCA TERM 907 1831717 - 1831749 + H 82 -11.3 -3.5891 | overlap 1831716 TAGTCGTGCTCTATC GTGTCAGCTATGCGA TTC TCTCACGGCTGACAC TGTTTGCTTCTCAAG TERM 908 1832356 - 1832340 - g 72 -10.1 -3.0464 | opp_overlap 1832348 AAGGGATTCTCAATA CGGCTGG ATT CCAGCCA CCATCGTGGTGAGAG tfbA 1832060 - 1832368 + | transcription initiation factor TFB ppaT 1833439 - 1832927 - | phosphopantetheine adenylyltransferase gcs2 1834710 - 1833619 - | carboxylate-amine ligase flpA 1835623 - 1834976 - | fibrillarin nop56 1836477 - 1835620 - | pre-rRNA-processing protein nop56 HQ2569A 1836887 - 1837375 + | hypothetical protein TERM 909 1837816 - 1837837 + F 77 -9.3 -3.96892 | overlap 1837817 1837830 GGTTTGTCGGATTTA TCCCCGCTG TGAA CGGCGGGGC TTTCTCCTCGCACTT TERM 910 1837817 - 1837836 + F 80 -12.8 -2.97653 | overlap 1837816 1837830 GTTTGTCGGATTTAT CCCCGCTG TGAA CGGCGGGG CTTTCTCCTCGCACT TERM 911 1839428 - 1839402 - g 80 -6.7 -4.74801 | gap 1, opp_overlap 1839390 1839402, overlap 1839404 GAACGGGATCAAAAA TCTCGT-GTTGG TGCC CCAACGACGAAA TTGATGCATGATAAG tfbA 1839108 - 1840148 + | transcription initiation factor TFB HQ2572A 1840406 - 1840290 - | hypothetical protein tif2b 1841081 - 1840827 - | translation initiation factor aIF-2 beta subunit HQ2574A 1841291 - 1841527 + | hypothetical protein TERM 912 1841848 - 1841827 - T 76 -11.6 -2.55074 | opp_overlap 1841819 TTCAATTGTAAGGTA CCACGGGT CGGGTT ACCCGTGG AACTCTCGCTATGAT HQ2576A 1843073 - 1842597 - | hypothetical protein ogg 1844116 - 1843103 - | DNA N-glycosylase / DNA lyase TERM 913 1844372 - 1844384 + r 77 -10.5 -3.38951 | AGATATAGCACTTCC CCCGG CTC CCGGG TTAATCTATTCCTGA malQ 1846028 - 1844406 - | 4-alpha-glucanotransferase thrS 1846532 - 1848460 + | threonine--tRNA ligase nadE 1850250 - 1848565 - | NAD(+) synthase (glutamine-hydrolyzing) HQ2581A 1850529 - 1851983 + | NAD-binding protein ( Kef-type transporter subunit) HQ2582A 1852587 - 1852285 - | hypothetical protein TERM 914 1852716 - 1852694 - R 83 -6.5 -5.0095 | AAAAATATAATAAAA TATATTACT TATAT AGTAATATA ACCGAGATTACACCA HQ2583A 1853335 - 1852862 - | hypothetical protein metK 1855264 - 1854059 - | S-adenosylmethionine synthetase cyaB 1855921 - 1855346 - | adenylate cyclase TERM 915 1856259 - 1856247 - g 72 -10.5 -3.04263 | ACCGCAGGCGGAAGA GGCCG ATA CGGCC GATTCGGGCATTCAA mtfK2 1856221 - 1857273 + | FKBP-type peptidylprolyl isomerase 2 minD 1858625 - 1858011 - | cell division inhibitor MinD-like (ATPase involved in chromosome partitioning) HQ2588A 1859150 - 1858773 - | hypothetical protein HQ2589A 1859364 - 1860902 + | hypothetical protein dph2 1861634 - 1862674 + | diphthamide synthase subunit DPH2 HQ2591A 1862931 - 1863794 + | hypothetical protein TERM 916 1864056 - 1864104 + F 70 -8.8 -3.30771 | overlap 1864059 1864059 1864061 TGAGGCGGGTTCGGG TGCGGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCCTA TTCTCGACCATATAC TERM 917 1864059 - 1864101 + F 78 -12.7 -2.5294 | overlap 1864059 1864056 1864061 GGCGGGTTCGGGTGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTCTCGACCATA TERM 918 1864059 - 1864102 + F 74 -10.3 -3.22102 | gap 1, overlap 1864056 1864059 1864061 GGCGGGTTCGGGTGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTCTCGACCATAT TERM 919 1864061 - 1864099 + F 77 -11.7 -2.80074 | overlap 1864059 1864059 1864056 CGGGTTCGGGTGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTCTCGACCA HQ2592A 1864631 - 1865569 + | hypothetical protein phoU 1867720 - 1866704 - | phosphate uptake regulator / ABC transport system regulatory protein TERM 920 1868324 - 1868311 - g 70 -8.1 -3.87364 | overlap 1868303 GCGACAACAACAGAA TCCGC TGGG GCGGA TGCTAATCAGACACA HQ2594A 1868023 - 1869060 + | phosphate transport system regulator related protein pat 1869883 - 1869242 - | acetyltransferase protein phnE 1870897 - 1869890 - | ABC-type phosphate/phosphonate transport system,permease protein phnC 1871739 - 1870894 - | ABC-type phosphate/phosphonate transport system,ATPase protein phnD 1872815 - 1871784 - | ABC-type phosphate/phosphonate transport system,substrate-binding protein phnG 1873085 - 1873534 + | phosphonate metabolism protein PhnG phnH 1873531 - 1874205 + | phosphonate metabolism protein PhnH phnI 1874205 - 1875356 + | phosphonate metabolism protein PhnI phnJ 1875349 - 1876467 + | phosphonate metabolism protein PhnJ phnK 1876464 - 1877300 + | phosphonate ABC transporter ATP-binding protein phnL 1877304 - 1878248 + | phosphonate ABC transporter ATP-binding protein TERM 921 1878518 - 1878466 - g 70 -2.1 -4.98616 | gap 4, opp_overlap 1878501, overlap 1878467 1878476 GGAAAATATCAAAAA TGAGACACTATCCGCTGCGGACCGGCG CAT CGACG--CCGCAG-GG-CAGTATCTCG TTCCAGGTCTTATCG phnM 1878245 - 1879504 + | phosphonate metabolism protein PhnM HQ2606A 1879501 - 1880304 + | hypothetical protein arsR 1881022 - 1880624 - | arsenical resistance operon repressor (transcription regulator) arsD 1881336 - 1881671 + | arsenical resistance operon trans-acting repressor ArsD (transcriptional regulator) TERM 922 1882688 - 1882702 + G 74 -2.8 -5.14563 | CTCCGACCGGGTGAT GAGACA CAG TATCTC TTTTTTACTGGCAAA arsA 1881668 - 1883599 + | arsenite efflux ATPase HQ2610A 1883596 - 1883964 + | hypothetical protein HQ2611A 1885704 - 1884754 - | hypothetical protein arsR 1886081 - 1885701 - | ArsR family transcriptional regulator TERM 923 1886959 - 1886998 + G 72 -10.1 -3.05816 | gap 1 CGCCTGTTTGTTGTA CTCGATTTGG-CGAGCGG TCGAT CTGCTCGTCCAAGTCAAG TTGACTGGAGAATAC HQ2613A 1886558 - 1887082 + | transposase (ISHnew91) TERM 924 1887269 - 1887281 + T 72 -6.3 -4.35518 | opp_overlap 1887256 CACTGTAGTCTCAAC TACTG GAT CAGTA TTTTGATATAGCGTT xerC 1888776 - 1887673 - | tyrosine recombinase xerC HQ2615A 1889261 - 1888776 - | hypothetical protein TERM 925 1888867 - 1888825 - G 81 -12.7 -2.80816 | gap 1, overlap 1888828 GCGTTATCGATCACA TCAGC-GTCCTCACGGAGGG TATA CCCACCGTGACGACCGCTGT AGGTGATAACACTCG TERM 926 1888864 - 1888828 - G 81 -13 -2.66964 | gap 1, overlap 1888825 TTATCGATCACATCA GC-GTCCTCACGGAGGG TATA CCCACCGTGACGACCGC TGTAGGTGATAACAC TERM 927 1891422 - 1891432 + r 80 -5.4 -5.01422 | TCGGACGCTTCCAGT TGTC CCT GACA TTTGTTTTTATATCA HQ2617A 1893060 - 1892317 - | hypothetical protein TERM 928 1893735 - 1893707 - g 76 -9.6 -3.66921 | overlap 1893708 1893721 AATCTGAACGCGAAA CCCTCACGCCAA CACGC TTGGCGTGAGTA CGTCCGCCAAGACGA TERM 929 1893734 - 1893708 - g 74 -10.9 -2.79671 | overlap 1893707 1893721 ATCTGAACGCGAAAC CCTCACGCCAA CACGC TTGGCGTGAGT ACGTCCGCCAAGACG HQ2618A 1893569 - 1894867 + | hypothetical protein TERM 930 1895113 - 1895101 - g 74 -4.1 -4.99947 | TGGAAGCAAACAAAA TCGAT GAC ACCGA CCGCGCGATTTTGCA lrp 1895085 - 1895561 + | transcription regulator TERM 931 1895615 - 1895599 - T 71 -3.6 -4.7657 | opp_overlap 1895599 1895600, overlap 1895600 CAAAAAGTCGAAAAA GCGCTC ATATA GAGCGA TTATATATGTGATGA guaD 1896677 - 1895661 - | nucleoside deaminase (cytosine deaminase, guanine deaminase) TERM 932 1897420 - 1897432 + H 72 -2.7 -5.00923 | overlap 1897414 GTCATTATCTATATC GAATA TAA TGTTC TTTTATTTACTATTT nuoL 1897634 - 1899220 + | homolog to NADH dehydrogenase, subunit L (ubiquinone) HQ2622A 1899210 - 1902005 + | hypothetical protein HQ2623A 1902945 - 1902202 - | hypothetical protein HQ2624A 1903162 - 1903947 + | hypothetical protein HQ2625A 1904000 - 1904701 + | glycosyltransferase-like protein HQ2626A 1904891 - 1904694 - | hypothetical protein HQ2627A 1904993 - 1905895 + | hypothetical protein gbp 1905956 - 1907128 + | translation-associated GTPase aspC 1908298 - 1907177 - | PLP-dependent aminotransferase ( aspartate aminotransferase ) ssuA 1908602 - 1909687 + | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component; putative aliphatic sulfonate binding protein ssuC 1909684 - 1910589 + | sulfonate ABC transporter permease ssuB 1910673 - 1911395 + | ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; sulfonate ABC transporter ATP binding protein HQ2633A 1911667 - 1911476 - | hypothetical protein rad25 1911794 - 1913116 + | DNA repair protein Rad25 HQ2635A 1913123 - 1914631 + | hypothetical protein HQ2636A 1915308 - 1914787 - | hypothetical protein sun 1916243 - 1915305 - | tRNA and rRNA cytosine-C5-methylases HQ2638A 1916403 - 1917149 + | hypothetical protein TERM 933 1917190 - 1917210 + F 79 -9.7 -3.73008 | AATACTTGCTGTTCG CCGGTGATG AGG CATCACCAG TTCTATGTGTTTAAG grpE 1917250 - 1918059 + | dnaJ/dnaK ATPase stimulator grpE dnaK 1918232 - 1920157 + | dnaK-type molecular chaperone hsp70 TERM 934 1920164 - 1920149 - f 72 -4.7 -4.58424 | overlap 1920156 1920160 GATGATGACACAAAA GACGA ATGATA TCGTC GGACATCGTCGACCG dnaJ 1920782 - 1921945 + | chaperone protein DnaJ HQ2642A 1922078 - 1922875 + | hypothetical protein HQ2643A 1923027 - 1923626 + | homolog to acetyltransferases HQ2644A 1924362 - 1923997 - | hypothetical protein HQ2645A 1924919 - 1924467 - | hypothetical protein TERM 935 1925152 - 1925127 - H 73 -7.7 -4.12279 | opp_overlap 1925126, overlap 1925130 GAAACTCAAAGTAAA TTATCATAAGC GGCT GCTTATGAGAA GTATGGTACTGTATA TERM 936 1925514 - 1925481 - H 70 -8.9 -3.34013 | gap 1, opp_overlap 1925481 1925513 GACGTTTCGAATCAA CGTCGTC-CGAGAGAC GAA GTCTCTCGTGATCACG AAAATATTCGATTTT TERM 937 1925635 - 1925614 - H 72 -9.4 -3.52522 | overlap 1925610 TCAGAGAAACAGGAA GCCTCAGG CTTGCC CCCGAGGC AGGTTCACAGCGAGC cdd 1925680 - 1926096 + | cytidine deaminase TERM 938 1926126 - 1926101 - f 70 -9.7 -3.00138 | opp_overlap 1926123, overlap 1926098 ACGGACAGTAAAGTA CTCAGGGGTCA CATC TGAGCCCCGAG GCACTCGCCTCAATT udp 1926380 - 1927204 + | uridine phosphorylase ndh 1927412 - 1928608 + | NADH dehydrogenase TERM 939 1928795 - 1928776 - T 70 -9.2 -3.31792 | opp_overlap 1928768 1928762 TGAGCAGGCGCAGAA CCTCGCTC TTTA GCGCGAGG AGGATGTCAACTGCG HQ2649A 1929440 - 1928907 - | transcriptional regulator galE 1929522 - 1930439 + | nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) gyrA 1933191 - 1930621 - | DNA gyrase / DNA topoisomerase II subunit A gyrB 1935749 - 1933191 - | DNA gyrase / DNA topoisomerase II subunit B TERM 940 1934901 - 1934914 + g 73 -9.5 -3.29958 | overlap 1934900 TCCAGTCAGATGCGT CCCGC CCTC GCGGG TATTGATATTATTCG TERM 941 1938658 - 1938623 - g 70 -9.8 -3.14134 | overlap 1938621 ATATTGATGAAGATA TCTACCCGCTTGTTGC GGAT GCAACAAGCACGCAAA AAGATCATGAAACAG top6B 1935925 - 1939839 + | DNA topoisomerase VI subunit B TERM 942 1940276 - 1940264 - g 70 -7.7 -3.89614 | opp_overlap 1940264 TCCAACGCGGACAAA GACGA ATA TCGTC TTTGATGAGGATTCA top6A 1940145 - 1941239 + | DNA topoisomerase VI subunit A TERM 943 1941444 - 1941434 - f 72 -5.4 -4.49673 | opp_overlap 1941434 AGACAAAATAAAGAA CTGT TCA ACAG CTTTTTTGACTGAGA thiE 1941481 - 1942152 + | thiamine-phosphate pyrophosphorylase thiM 1942152 - 1943018 + | hydroxyethylthiazole kinase TERM 944 1943671 - 1943702 + G 79 -3.6 -5.27477 | GTGTATGGCCTGATA CTGTTGAGGCGCGT GAAC GTGCGGCTAAGCAG TTTTTTGATTGGGGT thiD 1943205 - 1944026 + | phosphomethylpyrimidine kinase HQ2658A 1944854 - 1944138 - | hypothetical protein ligB 1946907 - 1945051 - | DNA ligase (ATP) TERM 945 1946295 - 1946309 + g 71 -4.2 -4.77567 | CTGATTTGGCATCCT CACGAG ATT CTAGTG TTTTCTTATCGGCAT TERM 946 1948630 - 1948600 - g 71 -6.9 -4.29348 | opp_overlap 1948625, overlap 1948597 1948621 TATATAAAAGAACAA CGAGAAACGCTTC TTGAT GAATCATTCCTCG CGTGGGAATGAACCT HQ2660A 1947109 - 1948641 + | hypothetical protein TERM 947 1948943 - 1948930 - T 72 -6.7 -4.28651 | ATCAAAATGTCAAAA CGTGA ATAC TCACG ACAATTGCAATAATT psmB 1949707 - 1948976 - | proteasome beta subunit HQ2662A 1950201 - 1949962 - | hypothetical protein HQ2663A 1950495 - 1950851 + | hypothetical protein HQ2664A 1951055 - 1951600 + | transcriptional regulator purM 1952787 - 1951759 - | phosphoribosylaminoimidazole synthetase TERM 948 1952279 - 1952265 - G 71 -7.1 -4.07568 | opp_overlap 1952256 CTGTCTCGGTGAAAA CACCG TCTTT CGGTG TCAACCCGGCACATG HQ2666A 1953139 - 1953387 + | hypothetical protein HQ2667A 1954211 - 1953537 - | membrane metallopeptidase TERM 949 1954026 - 1953990 - G 73 -3.6 -4.90266 | gap 1 CTCATGAAGTAAAAA CCCGAGTC-CAGCGGTC AGTA GACTGACGAGAATCGGG ATAATGACACCGCGG TERM 950 1954099 - 1954088 - G 78 -5.8 -4.69053 | CACCAGCGAAGAAAA TCGC AAAC GCGA CGCTCAATGCAATAA TERM 951 1954374 - 1954355 - R 73 -10.6 -2.99161 | overlap 1954344 1954343 1954354 GAATCGAGGAGAAAG CCTCGCGC TTCA GCGCGGGG AGGATGTCAAGCTCA traB 1956118 - 1954454 - | plasmid transfer protein TERM 952 1955663 - 1955633 - G 76 -8.4 -4.00756 | overlap 1955635 GAGCGGACCAAAGAA CAGACCTGCAATAA CAC CTATTGCAAGTCCA ATGCCAAGCCCATTA TERM 953 1955661 - 1955635 - G 79 -11 -3.59252 | overlap 1955633 GCGGACCAAAGAACA GACCTGCAATAA CAC CTATTGCAAGTC CAATGCCAAGCCCAT TERM 954 1955699 - 1955712 + g 82 -5.3 -5.08824 | ACCGACAGCGAGCCC TCCAA TAAG TTGGA TTTTTTCAATCCGGG HQ2669A 1956410 - 1956946 + | hypothetical protein HQ2670A 1957078 - 1957545 + | hypothetical protein TERM 955 1959693 - 1959711 + G 72 -10.4 -3.02324 | opp_overlap 1959680 1959692, overlap 1959680 1959695 TACCTGTTAAGTCAT GATCAACA GGG TGTTGATC TCTCATTTGAGTGGG TERM 956 1960322 - 1960349 + G 83 -11.4 -3.56216 | TGTCGAAGCCGAGGA TGACTCGATTGC TGAT GCAGTTGAGTCA TTATCTGGATTACTT ileS 1957785 - 1960964 + | isoleucyl-tRNA synthetase dhaK1 1961159 - 1962166 + | dihydroxyacetone kinase dhaK2 1962159 - 1962902 + | dihydroxyacetone kinase dhaM 1962902 - 1963357 + | phosphoenolpyruvate-protein phosphoryltransferase gpdA 1963756 - 1965009 + | glycerol-3-phosphate dehydrogenase, subunit A HQ2676A 1965172 - 1965873 + | hypothetical protein HQ2677A 1966203 - 1965988 - | hypothetical protein HQ2678A 1966494 - 1967144 + | S-adenosylmethionine-dependent methyltransferase-like protein HQ2679A 1968739 - 1967756 - | hypothetical protein ugd 1970218 - 1968893 - | UDP-glucose 6-dehydrogenase stt3 1973804 - 1970496 - | transmembrane oligosaccharyl transferase graD 1974242 - 1974991 + | sugar nucleotidyltransferase II ( glucose-1-phosphate thymidylyltransferase) galE 1975978 - 1974992 - | nucleoside-diphosphate-sugar epimerase 1 ( UDP-glucose 4-epimerase) TERM 957 1976590 - 1976638 + H 72 -10.3 -2.84602 | gap 3, overlap 1976591 1976619 CTGTTCTCAATCCCC CA-CCTGCGGGCGTAC-CGCC-CC ATGA GGCGGCGAGCACGCCCGCGTGCTG CTTTCGTGCCATCAC TERM 958 1976591 - 1976636 + H 70 -9.6 -2.97171 | gap 2, overlap 1976590 1976619 TGTTCTCAATCCCCC ACCTGCGGGCGTAC-CGCC-CC ATGA GGCGGCGAGCACGCCCGCGTGC TGCTTTCGTGCCATC TERM 959 1976927 - 1976890 - H 100 -14.3 -3.69359 | gap 1, overlap 1976882 1976891 AGGAAAAGTATATAA CCCCTGTTCACCGA-TCC GAT GGAGTCGGTGAACAGGCA GAAACAGGCTTCTAC TERM 960 1976926 - 1976891 - H 93 -15.6 -2.80531 | gap 1, overlap 1976890 1976882 GGAAAAGTATATAAC CCCTGTTCACCGA-TCC GAT GGAGTCGGTGAACAGGC AGAAACAGGCTTCTA HQ2685A 1977742 - 1978557 + | hypothetical protein HQ2686A 1979641 - 1978601 - | hexosyltransferase; glycosyltransferase HQ2687A 1979745 - 1981328 + | polysaccharide biosynthesis transporter TERM 961 1981662 - 1981651 - g 70 -2.2 -5.00616 | TTCTTCCTCAAAAAA TCCA GTCT CGGA TCGGTGCGTGGCTAC HQ2688A 1981359 - 1982357 + | hypothetical protein TERM 962 1982748 - 1982732 - f 78 -6.5 -4.59376 | ATCATCAAATGAAAA GACTACC GCG GGTCGTC TGAAATGTGGCCATT TERM 963 1984035 - 1984050 + F 76 -4.7 -4.84017 | opp_overlap 1984035 CTGTCAACTACTGAA CTCCT GTGAGA AGGAG TTTTTATCCGCCGTT aslA 1984182 - 1985633 + | arylsulfatase HQ2691A 1986889 - 1985738 - | hexosyltransferase; glycosyltransferase HQ2692A 1988641 - 1987643 - | glycosyltransferase gtl 1989499 - 1990698 + | glycosyltransferase ( dolichyl-phosphate beta-D-mannosyltransferase) HQ2695A 1991213 - 1990887 - | hypothetical protein TERM 964 1991049 - 1991039 - G 71 -6.8 -4.17296 | CTTCAGAGAGAGAAA CGGT ACT ACCG GATGCATCGTATGGA HQ2696A 1991662 - 1991874 + | hypothetical protein HQ2697A 1992563 - 1992174 - | hypothetical protein HQ2698A 1993480 - 1992782 - | hypothetical protein HQ2699A 1994036 - 1993740 - | hypothetical protein TERM 965 1995982 - 1996021 + G 76 -10.8 -3.19602 | gap 1, opp_overlap 1995982, overlap 1995980 1995983 CTCTATCTCAAGCCA TCGTGAACGCTGTTCATAC TCA GT-TGGACAGCGCTCGCGG TATTGGTATCGACGC TERM 966 1995983 - 1996020 + G 78 -12.1 -2.51547 | gap 1, opp_overlap 1995982, overlap 1995982 1995980 TCTATCTCAAGCCAT CGTGAACGCTGTTCATAC TCA GT-TGGACAGCGCTCGCG GTATTGGTATCGACG TERM 967 1996047 - 1996062 + G 85 -10.4 -4.21631 | overlap 1996035 GACGCTCGTATTGTA GGGGCT CCTT AGCCCC TTTATTCACTCAGTT HQ2701A 1995698 - 1996354 + | hypothetical protein ilvB 1996400 - 1998199 + | acetolactate synthase large subunit ilvN 1998196 - 1998969 + | acetolactate synthase, small subunit ilvC 1998966 - 2000084 + | ketol-acid reductoisomerase leuC 2000103 - 2001569 + | isopropylmalate isomerase large subunit leuD 2001569 - 2002177 + | 3-isopropylmalate dehydratase small subunit leuB 2002181 - 2003185 + | 3-isopropylmalate dehydrogenase TERM 968 2003669 - 2003648 - g 73 -8.7 -3.80858 | TGATAATCCAGTAAA CGCTGCAAG TATG CTTGCAGTG ACAGGGCTTGCGGTG hpr 2003517 - 2003786 + | phosphocarrier protein Hpr ptsI 2003791 - 2005512 + | phosphoenolpyruvate-protein phosphotransferase (phosphotransferase system, enzyme I) gatY 2005617 - 2006609 + | fructose/tagatose-1,6-bisphosphate aldolase HQ2711A 2006918 - 2007403 + | acetyltransferase HQ2712A 2007494 - 2008378 + | hypothetical protein tif2Ba 2009263 - 2008415 - | translation initiation factor 2B alpha chain HQ2714A 2010038 - 2009325 - | peptidoglycan binding protein TERM 969 2009742 - 2009718 - G 91 -12.1 -3.83502 | opp_overlap 2009725 GACTCGGATAGCAAA CCCAACGCGGG TTC CCCATGTTGGG AGTGTCGCCCCAAGA HQ2715A 2010234 - 2010482 + | hypothetical protein TERM 970 2010743 - 2010730 - g 78 -8.1 -4.42386 | GGTTGATGTAGAAAA GGCTG ATAT CAGCC CGGCAAAACACGTCT HQ2716A 2010479 - 2012740 + | AAA-type ATPase (transitional ATPase homolog) TERM 971 2012769 - 2012779 + T 72 -2.6 -5.0065 | GCTTTGATCATATCG TAAT TGT ATTA TTTTATTTATGAATA bcp 2013300 - 2012830 - | peroxiredoxin (thioredoxin-dependent hydroperoxide peroxidase) HQ2718A 2014772 - 2013348 - | primase operon protein TERM 972 2015018 - 2015032 + r 84 -8.6 -4.70169 | opp_overlap 2015017 2015020 CGGAGCATCATAAGT CACTGA TAA TCAGTG TTTTATTGGCTATCG priA 2016253 - 2015096 - | DNA primase small subunit TERM 973 2015982 - 2015992 + g 71 -4 -4.77759 | opp_overlap 2015974 AATATGAGATCAGCC GATT GCC AATC TTTTTGATCCATTGT TERM 974 2017380 - 2017404 + G 75 -10.1 -3.30771 | overlap 2017347 2017360 2017382 2017383 2017397 GGTGGAACCGCAGCG TATCCATCAAG TGT CTTGATGGGTG TTATCCCAGCTATCG TERM 975 2017382 - 2017402 + G 73 -10.5 -3.22102 | overlap 2017347 2017360 2017380 2017383 2017397 TGGAACCGCAGCGTA TCCATCAAG TGT CTTGATGGG TGTTATCCCAGCTAT TERM 976 2017383 - 2017401 + G 75 -11.8 -2.5294 | overlap 2017347 2017360 2017382 2017380 2017397 GGAACCGCAGCGTAT CCATCAAG TGT CTTGATGG GTGTTATCCCAGCTA hisD 2016966 - 2018378 + | histidinol dehydrogenase TERM 977 2018560 - 2018518 - f 70 -10.6 -2.52786 | opp_overlap 2018559, overlap 2018517 2018515 2018559 AGAGGACATGAATAT CGGTGATGTGGAGATTGCAA CAA TCGCAACCTCATCATCAACG GTCAAAGACTGTGTA HQ2721A 2018705 - 2019070 + | hesB/IscA family protein HQ2722A 2019416 - 2019778 + | hypothetical protein ushA 2020055 - 2021476 + | 5'-nucleotidase; 2',3'-cyclic-nucleotide 2'-phosphodiesterase; UDP-sugar hydrolase HQ2724A 2021776 - 2022189 + | hypothetical protein msc 2023666 - 2022521 - | mechanosensitive ion channel trmB 2024062 - 2025123 + | sugar-specific transcriptional regulator TrmB HQ2727A 2025210 - 2025638 + | hypothetical protein TERM 978 2026132 - 2026104 - g 81 -12.5 -3.06183 | opp_overlap 2026125, overlap 2026124 2026125 TGCATTCGCAGTCAA GTCAGCGAGTCCT TCA AGAACTCGCTGAA GCGTTCAACGGTTGG TERM 979 2026948 - 2026962 + G 75 -11.4 -2.63382 | overlap 2026947 CAAGCGGGATGGGAA CCGCGT TGA ACGCGG GTTGTACGTCTGCGA HQ2728A 2025878 - 2027158 + | IS1341-type transposase TERM 980 2027761 - 2027749 - g 79 -3.3 -5.19212 | overlap 2027750 2027751 ACGAGCAGCAAAAAA TGCGA CAC TCGCC GGTGCTGTAAGCGGA TERM 981 2028377 - 2028364 - g 70 -8.1 -3.89055 | opp_overlap 2028363 AGACATCTGGACAAA TCGCG TGTA CGCGA CTGATTACAATTACC rfcB 2027483 - 2029033 + | replication factor C large subunit glnQ 2029868 - 2029134 - | ABC-type glutamine/glutamate/polar amino acids transport system, ATP-binding protein TERM 982 2029520 - 2029536 + g 77 -3 -5.22943 | gap 1, overlap 2029520 CAGCGCGCTGTGTTG CC-TCCT TATC AGGAAGG TTTTTTACCTTTCGT glnP 2030715 - 2029861 - | ABC-type glutamine/glutamate/polar amino acids transport system, permease protein glnH 2031705 - 2030803 - | ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein ctaA 2032972 - 2032136 - | cytochrome-c-aa3 oxidase assembly factor CtaA HQ2735A 2033484 - 2034593 + | metallopeptidase mdh 2034710 - 2036956 + | malic enzyme TERM 983 2037143 - 2037191 + T 70 -8.8 -3.30771 | overlap 2037146 2037146 2037148 TGAGGCGGGTGCGGG TGCGGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCCTA TTCTCGACCATGTAC TERM 984 2037146 - 2037189 + T 74 -10.3 -3.22102 | gap 1, overlap 2037143 2037146 2037148 GGCGGGTGCGGGTGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTCTCGACCATGT TERM 985 2037146 - 2037188 + T 78 -12.7 -2.5294 | overlap 2037146 2037143 2037148 GGCGGGTGCGGGTGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTCTCGACCATG TERM 986 2037148 - 2037186 + T 77 -11.7 -2.80074 | overlap 2037146 2037146 2037143 CGGGTGCGGGTGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTCTCGACCA HQ2737A 2038595 - 2037807 - | hypothetical protein TERM 987 2038414 - 2038426 + g 72 -10.5 -3.08187 | opp_overlap 2038412 2038413 2038408 2038406, overlap 2038421 TCAGAAACAGATACT CGCGC AAC GCGCG TTCCATCGCGTGTTT TERM 988 2039085 - 2039121 + G 75 -5.8 -4.59109 | gap 1, opp_overlap 2039085 GTCCCACAAACACAA TCAG-GATGGGCAAGCG TCGG CGCTGGCGCAACACTGA TTTTTGCCGGATATC rhaT 2038881 - 2039816 + | DMT superfamily drug/metabolite transporter TERM 989 2040452 - 2040434 - T 77 -10.2 -3.30474 | opp_overlap 2040435, overlap 2040427 TCGTAGAAGCAGGAA GCCCCGCC CTC AGCGAGGC CGTCAGGTCGAGCAG HQ2739A 2040931 - 2040524 - | hypothetical protein TERM 990 2040729 - 2040711 - G 71 -8.8 -3.65522 | opp_overlap 2040711 2040708 2040708 CATTCATCCGAAGAA TCGCTGCG ACG CCCAGCGA TGACTTCTTCCCCAT cmk 2041692 - 2041078 - | cytidylate kinase HQ2741A 2041924 - 2042583 + | hypothetical protein HQ2742A 2042747 - 2042890 + | hypothetical protein HQ2743A 2042986 - 2043318 + | ribosomal protein S10-like protein HQ2744A 2043374 - 2044726 + | indole-3-acetyl-L-aspartic acid hydrolase TERM 991 2045388 - 2045408 + T 70 -9.7 -3.05343 | opp_overlap 2045375 2045372 2045402, overlap 2045396 2045406 TATGACGGCGCGTAC CCACGCC GTGAACA GGCGTGG TATTGCGCCTGTACC HQ2745A 2045810 - 2045619 - | hypothetical protein phoU 2046889 - 2045858 - | transport system regulatory protein HQ2747A 2048039 - 2046939 - | hypothetical protein TERM 992 2048201 - 2048181 - R 83 -14 -2.70932 | opp_overlap 2048172 2048172 GGGTCGTGTGAAGTA CCTCGGGG TCAAG CCCCGAGG CTTCACCATTTGGGG HQ2748A 2048840 - 2048682 - | hypothetical protein HQ2749A 2049242 - 2050477 + | signal-transducing histidine kinase bat 2051100 - 2053013 + | bacterio-opsin activator TERM 993 2053184 - 2053168 - T 70 -5.1 -4.42639 | ACAGCGCAAGCAAAA TGACTCG GGA CGATTCA CCAGCAAGAGATGTA HQ2751A 2053671 - 2053234 - | response regulator / transcription regulator lhr 2055077 - 2057935 + | Lhr-like helicase cdc48 2060334 - 2058037 - | AAA-type ATPase (transitional ATPase homolog) TERM 994 2058150 - 2058175 + g 71 -10.3 -2.76468 | overlap 2058146 TAAGGACAATCTCAT CGGCGTGTTCG TTTG CGGTCGCGCCG TCATATTCAGTGGTG livJ 2060447 - 2061787 + | ABC-type branched-chain amino acid transport system, substrate-binding protein TERM 995 2062218 - 2062238 + G 84 -12.7 -3.14683 | GTCCAGTCGAATTCT TTGGTGTTG GCA CAACACCAA TTCGTGCAACAGTAT livH 2061803 - 2062687 + | ABC-type branched-chain amino acid transport system, permease protein I livM 2062687 - 2063754 + | ABC-type branched-chain amino acid transport systems, permease protein II livG 2063813 - 2064595 + | ABC-type branched-chain amino acid transport systems, ATP-binding protein I TERM 996 2065028 - 2064999 - g 71 -6.5 -4.30576 | gap 1 TTCCCACGATTAAAA GAACGTCTCATGCA GAC CGC-TGAGACACTC TCTGGGGGCGAACGA livF 2064588 - 2065328 + | ABC-type branched-chain amino acid transport systems, ATP-binding protein II TERM 997 2065377 - 2065355 - f 78 -6.3 -4.56914 | opp_overlap 2065358, overlap 2065358 TGATCGAAACCAAAA TAACAGCCA ATCTG TGGCTGTTT ATTCGCGATTTATTT TERM 998 2065358 - 2065374 + F 73 -8 -4.19371 | opp_overlap 2065355 2065358 TCGAAACCAAAATAA CAGCCA ATCTG TGGCTG TTTATTCGCGATTTA TERM 999 2065374 - 2065358 - f 79 -8 -4.38472 | opp_overlap 2065358, overlap 2065355 TCGAAACCAAAATAA CAGCCA ATCTG TGGCTG TTTATTCGCGATTTA HQ2759A 2065444 - 2065581 + | C2H2 zinc finger DNA-binding protein HQ2760A 2066193 - 2065735 - | hypothetical protein TERM 1000 2066329 - 2066277 - R 76 -12 -2.52464 | gap 1 TCGTCTGTGAACCCA CCCCGGGGCAGTCGCCTTGACCGCC TACA GATTGTCAAGGCGACTG-CCTGAAG ATGAAGCCGACACCT TERM 1001 2066521 - 2066488 - R 72 -8.9 -3.51708 | gap 1, opp_overlap 2066520 GACGTTCCAAATCAA CGTCATC-CGGGAGAC GAA GTCTCTCGTGATCACG AAAATCTTCGATTTT TERM 1002 2066623 - 2066613 - R 71 -6.8 -4.15044 | opp_overlap 2066612 GTTCTGCCGAAGAAA CAGG AAG CCTG GGGTTTTGATGTTGA HQ2761A 2067185 - 2067018 - | hypothetical protein aroK 2067252 - 2068169 + | shikimate kinase pheA 2068249 - 2068623 + | chorismate mutase TERM 1003 2069053 - 2069021 - T 100 -15.6 -4.06361 | gap 1, opp_overlap 2069023, overlap 2069023 GGATATATAACTAAA TAGCCTCGGGCACGG CGAC CCG-GCCCGAGGCTT TTGTTGGTTCCCTCA TERM 1004 2069051 - 2069023 - T 100 -18.2 -3.617 | gap 1, opp_overlap 2069023, overlap 2069021 ATATATAACTAAATA GCCTCGGGCACGG CGAC CCG-GCCCGAGGC TTTTGTTGGTTCCCT TERM 1005 2069023 - 2069051 + T 100 -18.2 -4.79174 | gap 1, opp_overlap 2069023 2069021 ATATATAACTAAATA GCCTCGGGCACGG CGAC CCG-GCCCGAGGC TTTTGTTGGTTCCCT truB 2070425 - 2069406 - | H/ACA RNA-protein complex component Cbf5p cmk 2071018 - 2070440 - | cytidylate kinase HQ2766A 2072506 - 2071580 - | hypothetical protein adk 2073996 - 2073328 - | adenylate kinase HQ2768A 2074147 - 2074545 + | hypothetical protein ephA 2074775 - 2075725 + | epoxide hydrolase-related protein TERM 1006 2075851 - 2075871 + T 77 -8.9 -3.92869 | ATCATGTGACATCCT CGCCCGTCT CTC GGACGGGAG TTTCTCACTCGGTAA TERM 1007 2076999 - 2077054 + T 80 -12.6 -3.11634 | gap 1, opp_overlap 2077021 2077023, overlap 2077002 TCCGCCGCTTGTGTT GAGTGGGTGGGGGGGGCAAAGATACGC TTC GAGCGTC-TTGCACCCCTCACTCATTC TTCAATAGTGTCGAG TERM 1008 2077002 - 2077051 + T 83 -10.7 -3.70109 | gap 1, opp_overlap 2077021 2077023, overlap 2076999 GCCGCTTGTGTTGAG TGGGTGGGGGGGGCAAAGATACGC TTC GAGCGTC-TTGCACCCCTCACTCA TTCTTCAATAGTGTC HQ2770A 2077186 - 2077049 - | hypothetical protein HQ2771A 2078102 - 2077362 - | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) idiA 2078836 - 2078252 - | isopentenyl-diphosphate delta-isomerase lrp 2079522 - 2079097 - | transcription regulator carA 2079620 - 2080720 + | carbamoyl phosphate synthase small subunit TERM 1009 2081014 - 2081038 + T 73 -9.9 -3.47709 | opp_overlap 2081014 2081013, overlap 2081015 2081032 AAGAAGTGAGTAAAT CGCCTCGGGGT CAA GCCTCGAGGCA TTCTCCTCGTATTCT TERM 1010 2081015 - 2081037 + T 81 -13.4 -2.67902 | opp_overlap 2081014 2081013, overlap 2081014 2081032 AGAAGTGAGTAAATC GCCTCGGGGT CAA GCCTCGAGGC ATTCTCCTCGTATTC HQ2775A 2082188 - 2081121 - | protein N-acetyltransferase gatD 2083547 - 2082219 - | glutamyl-tRNA(Gln) amidotransferase subunit D TERM 1011 2082937 - 2082923 - G 75 -5.6 -4.72272 | GGCTTCCAGTAAAAA CGACTG GGA CAGGCG TATCAAGCATATATG TERM 1012 2083052 - 2083067 + g 72 -10.4 -2.94726 | opp_overlap 2083052 2083051 2083049, overlap 2083046 CTGCAGCAGCAAGAT CCTGCC AGAC GGCAGG TGTCATGTTCTCAGA HQ2778A 2084285 - 2084818 + | hypothetical protein HQ2779A 2085727 - 2084924 - | transcription regulator HQ2780A 2086503 - 2085778 - | hypothetical protein gpmA 2086829 - 2088343 + | phosphoglyceromutase HQ2782A 2089029 - 2088361 - | hypothetical protein HQ2783A 2089098 - 2089538 + | hypothetical protein HQ2784A 2089880 - 2089533 - | hypothetical protein TERM 1013 2090723 - 2090766 + r 83 -9.7 -4.07678 | gap 2, opp_overlap 2090699 2090723 TGACTTCGTGAACCA CCCCACCCT-ACT-CAGCCAC TGGC GTGGTTCCGGTGAGGGTGGGG TTTGCTGTTTTGACG HQ2786A 2092373 - 2091351 - | hypothetical protein sppA 2093352 - 2092366 - | protease IV; endopeptidase IV; signal peptide peptidase HQ2788A 2093505 - 2094068 + | phosphoglycolate phosphatase HQ2789A 2094285 - 2094734 + | hypothetical protein TERM 1014 2094843 - 2094862 + T 79 -10.6 -3.5361 | overlap 2094844 GGACGTGATATCCTC GCCCGGCG TGAA CGCCGGGA TTCTCTCGCTGATTA TERM 1015 2094844 - 2094861 + T 83 -14.1 -2.71684 | overlap 2094843 GACGTGATATCCTCG CCCGGCG TGAA CGCCGGG ATTCTCTCGCTGATT folD 2095841 - 2094906 - | methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase TERM 1016 2095366 - 2095382 + g 71 -7.3 -4.0942 | AGTAGCTTTTGAATT CCATGTG GTG TACATGG TTTATATCGTGGCTG glyA 2097240 - 2095993 - | glycine hydroxymethyltransferase HQ2792A 2097630 - 2098454 + | hypothetical protein TERM 1017 2098889 - 2098875 - g 73 -8.6 -3.84406 | GTGTTATGACAACAA CATCAC CAG GTGATG CAGGATTTGCAGACC HQ2793A 2098502 - 2100295 + | hypothetical protein TERM 1018 2100302 - 2100321 + T 73 -10.6 -2.99161 | overlap 2100301 2100316 2100317 TTCCCTTGACATCCT CCCCGCGC TGAA GCGCGAGG CTTTCTCCTCGATTC TERM 1019 2100347 - 2100359 + T 85 -3.4 -5.47159 | opp_overlap 2100347 GATTCTCCGTAACAA CTGA ACGTC TCAG TTTTTTATATTACAA HQ2794A 2101586 - 2100441 - | hypothetical protein suhB 2102620 - 2101811 - | inositol-1(or 4)-monophosphatase/ fructose-1,6-bisphosphatase, type uspA 2103047 - 2102607 - | stress response protein HQ2797A 2103188 - 2103547 + | hypothetical protein TERM 1020 2104286 - 2104273 - g 73 -5.3 -4.63486 | ATGTCGCGAATAAAA CAGAT GTCA ATCTG AGCGGGGTTATGCTC mch 2103801 - 2104739 + | N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase caaX 2106246 - 2104900 - | CAAX prenyl proteinase / zinc metalloproteinase HQ2800A 2108230 - 2106602 - | translation elongation factor aEF-1 alpha subunit-like protein dnaJ 2109419 - 2108901 - | chaperone protein dnaJ HQ2802A 2109764 - 2111002 + | hypothetical protein HQ2803A 2111152 - 2111361 + | hypothetical protein HQ2804A 2112830 - 2113009 + | hypothetical protein TERM 1021 2113013 - 2113036 + T 72 -8.2 -3.69482 | GACTCGGATTAAGTG TTGAGAGACT GAAA AGTCACTCAA TTATGTCTTCACTCG livF 2113752 - 2113045 - | ABC-type branched-chain amino acid transport systems, ATP-binding protein I livG 2114785 - 2113754 - | ABC-type branched-chain amino acid transport systems, ATP-binding protein II livM 2116656 - 2114782 - | ABC-type branched-chain amino acid transport system, permease protein II livH 2118116 - 2116659 - | ABC-type branched-chain amino acid transport system, permease protein I TERM 1022 2117426 - 2117412 - G 71 -2.8 -4.93547 | overlap 2117414 GGAAGCAATGAAAAA GTCAAA AAA TTTGGC AAGGGTCACATCAAG TERM 1023 2118929 - 2118913 - g 74 -10.9 -2.85712 | overlap 2118910 CCATATGGACAAGGA CTTGCTG AAG CAGCAAG TGAAGCATTCAGTGG livJ 2118220 - 2119575 + | ABC-type branched-chain amino acid transport systems, substrate-binding protein HQ2810A 2119942 - 2121240 + | hypothetical protein HQ2811A 2121632 - 2121378 - | hypothetical protein HQ2812A 2122045 - 2121737 - | hypothetical protein HQ2813A 2122263 - 2122682 + | hypothetical protein HQ2814A 2123723 - 2122710 - | signal-transducing histidine kinase HQ2815A 2124527 - 2124237 - | hypothetical protein HQ2816A 2125317 - 2125553 + | hypothetical protein HQ2817A 2126036 - 2125671 - | hypothetical protein HQ2818A 2126475 - 2126711 + | hypothetical protein TERM 1024 2126776 - 2126791 + T 78 -4.7 -4.93696 | ATTATTTTGATCGTA CCAGT CCTCGT ACTGG TTTTTCCTGTTTGCA secY 2128458 - 2126989 - | preprotein translocase subunit SecY rpl15p 2128968 - 2128474 - | 50S ribosomal protein L15P rpl30p 2129429 - 2128965 - | 50S ribosomal protein L30P rps5p 2130088 - 2129429 - | 30S ribosomal protein S5P rpl18p 2130702 - 2130085 - | 50S ribosomal protein L18P TERM 1025 2130232 - 2130214 - G 71 -8.8 -3.72576 | overlap 2130228 TGTCGTTGCATCAAA GTCGCTGT TAT ACAGCGGC TCATCGCGCTGCTCG rpl19e 2131163 - 2130702 - | 50S ribosomal protein L19e rpl32R 2132113 - 2131160 - | 50S ribosomal protein L32e rpl6p 2132663 - 2132115 - | 50S ribosomal protein L6P TERM 1026 2132458 - 2132473 + g 76 -9 -3.85256 | opp_overlap 2132457 2132458 ACATGACTCTCAAAG GTGCCA ACAG TGGCAC TTGTCTTTGCGTCTG rps8p 2133060 - 2132668 - | 30S ribosomal protein S8P rps14P 2133239 - 2133063 - | 30S ribosomal protein S14P rpl5p 2133803 - 2133246 - | 50S ribosomal protein L5P rps4R 2134597 - 2133800 - | 30S ribosomal protein S4e rpl24p 2134953 - 2134594 - | 50S ribosomal protein L24P rpl14p 2135361 - 2134963 - | 50S ribosomal protein L14P TERM 1027 2135189 - 2135205 + g 76 -10.9 -3.14931 | TCGGGCGTTCCCTTT GTCACTG AAA CAGTGAC TTGATCGCCAATGCC rps17p 2135693 - 2135361 - | 30S ribosomal protein S17P rnpA 2136370 - 2135684 - | ribonuclease P protein component 1 (RNase P component 1) TERM 1028 2136086 - 2136074 - G 71 -4.1 -4.68724 | overlap 2136082 TGATTCAAGACAAAA TTCGA ATA CCGAA TCACGTTTCGGCACC rpl29 2136622 - 2136395 - | 50S ribosomal protein L29 rps3p 2137594 - 2136623 - | 30S ribosomal protein S3P TERM 1029 2137279 - 2137292 + g 74 -9.5 -3.53563 | opp_overlap 2137274 TCCGGAAGTACCATC CGCGC TCAA GCGCG TTTGCAAGACGATCT TERM 1030 2137428 - 2137444 + g 70 -2.1 -4.91712 | TTTTTTCCACCCTTT CCGATGA CCA TCCCCGG TTTTTCTGCCTTGAG rpl22p 2138070 - 2137594 - | 50S ribosomal protein L22P rps19p 2138519 - 2138097 - | 30S ribosomal protein S19P rpl2p 2139395 - 2138664 - | 50S ribosomal protein L2P rplW 2139653 - 2139399 - | 50S ribosomal protein L23 rpl4lp 2140396 - 2139650 - | 50S ribosomal protein L4P rpl3p 2141419 - 2140403 - | 50S ribosomal protein L3P HQ2843A 2142335 - 2141424 - | rpl operon protein TERM 1031 2141591 - 2141614 + g 83 -8.9 -4.35646 | TAGTATCAACATTTG CGGGTGAGA CCGTTT TCTCATCCG TTTGTGTTTGGCTAT TERM 1032 2141696 - 2141686 - G 71 -6.8 -4.26076 | CCAGGCGCACCAAAA GCGA TTG TCGC TCCCGCGCGATTGAC TERM 1033 2142668 - 2142681 + H 76 -4.5 -4.93877 | overlap 2142666 TTCAAATCCCGGCCA GCGCA TCTC TGTGC TTTTATTTGATGACA HQ2844A 2143012 - 2143758 + | hypothetical protein HQ2845A 2144392 - 2143835 - | hypothetical protein HQ2846A 2144923 - 2144396 - | hypothetical protein idiB 2146609 - 2145407 - | isopentenyl-diphosphate delta-isomerase capA 2147598 - 2149754 + | poly-gamma-glutamate biosynthesis/capsule biosynthesis protein HQ2850A 2150811 - 2150200 - | translation initiation factor IF-2 subunit beta HQ2851A 2151622 - 2151392 - | hypothetical protein dhs 2152936 - 2151812 - | putative deoxyhypusine synthase TERM 1034 2153170 - 2153151 - R 73 -7.9 -4.12603 | opp_overlap 2153160 CGGACGAAAGAATAA GACAGGT GTTCCG ACCTGTC GGCTTCGATTCGCTC nif3 2154328 - 2153558 - | hypothetical protein HQ2854A 2156276 - 2154525 - | hypothetical protein TERM 1035 2156011 - 2156027 + g 74 -10.8 -2.87931 | opp_overlap 2156005 2156004, overlap 2156006 TCCGATAATCCGACT GCGGCG TTACT CGCCGC TGTCTCCCCGCTGAA HQ2855A 2156637 - 2156386 - | hypothetical protein HQ2856A 2157767 - 2156640 - | hypothetical protein sucD 2159081 - 2158212 - | succinate--CoA ligase, alpha subunit (ADP-forming) sucC 2160223 - 2159078 - | succinate--CoA ligase beta subunit (ADP-forming) TERM 1036 2162984 - 2162968 - g 71 -6.6 -4.16301 | opp_overlap 2162967 CACACCAGAGACAAA GGAGTT ATATG AACTCC ATGATCTTGGCGAGC TERM 1037 2163310 - 2163322 + G 72 -6.2 -4.41616 | CAATAATCTCGATGA CGCC GCTGA GGCG TTTATTTACGAGGCT nrdA 2160650 - 2166379 + | ribonucleoside-diphosphate reductase alpha subunit (intein-containing) crtB 2167497 - 2168537 + | geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase) HQ2861A 2169696 - 2168848 - | carotenoid biosynthesis protein ubiA 2170564 - 2169689 - | prenyltransferase TERM 1038 2170042 - 2170013 - G 71 -7.1 -4.09864 | gap 1, opp_overlap 2170014, overlap 2170016 ACCCATTGTCCAAAA CCATCCACCAGCGA CGG CCGCAAGTGGA-GG TTGGTTCCCGGTTAC crtI 2172082 - 2170580 - | phytoene dehydrogenase (phytoene desaturase) TERM 1039 2172174 - 2172156 - H 82 -6.8 -4.78597 | GTAATAAGAAATAAA TGATACTC ATA GAATATCA CTAATCTTGCTTCGT HQ2864A 2172438 - 2172845 + | stress response protein HQ2865A 2173253 - 2173912 + | hypothetical protein HQ2866A 2173937 - 2174791 + | metalloenzyme, TatD related DNAse HQ2867A 2175279 - 2175866 + | hypothetical protein mvaB 2176203 - 2177669 + | hydroxymethylglutaryl-CoA synthase HQ2869A 2178740 - 2178030 - | transcriptional regulator HQ2870A 2178991 - 2179695 + | hypothetical protein TERM 1040 2180336 - 2180321 - g 71 -4.6 -4.62069 | opp_overlap 2180321 TGTTGACCCGAAAAA TGACCG TGCT CGGGCA TTTTATGATCGTCAT TERM 1041 2180321 - 2180336 + G 71 -4.6 -4.49311 | opp_overlap 2180321 TGTTGACCCGAAAAA TGACCG TGCT CGGGCA TTTTATGATCGTCAT HQ2871A 2179800 - 2180393 + | acetyltransferase HQ2872A 2180530 - 2181039 + | hypothetical protein alaS 2182347 - 2181109 - | alanine--tRNA ligase TERM 1042 2181422 - 2181446 + g 74 -10.7 -3.02739 | overlap 2181430 ATTTCTGTGATTGAT CCGATACGCCA GAC TGCCGTGTCGG TCTGTGTCGATTCGA HQ2874A 2183004 - 2182489 - | transcriptional regulator TERM 1043 2183691 - 2183709 + r 79 -10.2 -3.53012 | TCACGCTCACGCTCA CGCGCAGG ATT CCTCCGCG TTTGCACAGAGAAGG HQ2876A 2185226 - 2184972 - | hypothetical protein TERM 1044 2185048 - 2185068 + g 71 -4.5 -4.64144 | overlap 2185045 TGCACGTCATCCCGT GCGCGTTCG ACA TGCTCGCGC TTTTTCCCGGTTGTT TERM 1045 2186369 - 2186359 - g 73 -5.4 -4.53705 | AATCTCGACATAAAA TCGT TGG ACGA GTTGCCGCTTCATTG HQ2877A 2185884 - 2186444 + | hypothetical protein ksgA 2186574 - 2187464 + | dimethyladenosine transferase hemK 2187461 - 2188099 + | protein methyltransferase metE 2188161 - 2189234 + | 5-methyltetrahydropteroyltriglutamate--homocyste ine S-methyltransferase, methionine synthase II metE 2189234 - 2190328 + | methionine synthase ndk 2190999 - 2190523 - | nucleoside-diphosphate kinase rpl24R 2191187 - 2190996 - | ribosomal protein L24.eR rps28e 2191415 - 2191191 - | 30S ribosomal protein S28e rpl7ae 2191784 - 2191422 - | 50S ribosomal protein L7Ae HQ2886A 2192204 - 2192689 + | hypothetical protein TERM 1046 2192798 - 2192819 + T 72 -9.4 -3.53224 | opp_overlap 2192798 2192811 ACGCGATTTAGGGAA GTGCGAGG AGAGAG CCTCGCGC TTTCGCGCGGAGATA HQ2887A 2193776 - 2193132 - | hypothetical protein gltX 2195564 - 2193804 - | glutamyl-tRNA synthetase idsA 2196786 - 2195740 - | trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase) HQ2890A 2198140 - 2196788 - | hydrolase TERM 1047 2198175 - 2198162 - H 72 -8.1 -3.68529 | ATCCGAGCATCGAAA GCCAC TATT GTGGC GAAAGTGCTCACTGA HQ2891A 2198718 - 2198951 + | small nuclear ribonucleoprotein (snRNP)-like protein TERM 1048 2199015 - 2198986 - g 73 -2.1 -5.13741 | gap 1, overlap 2198988 TCAAGGGAAGAAAAA CA-CGACAACGCAT GTG AAGTGTCGTCGATG TGGGGAGAAATCCTA rpl37e 2198948 - 2199124 + | 50S ribosomal protein L37e TERM 1049 2199494 - 2199506 + F 83 -6.2 -4.9645 | GACTGTTGGATTCGT CCCC ACAGC GGGG TTTTCTTCTTATACT TERM 1050 2199925 - 2199910 - g 73 -3.2 -4.91429 | AAATCCGAAACAAAA CCGGAC GCTA ATCCAG ACGCGGAGACAGGCG TERM 1051 2200506 - 2200536 + G 83 -6.9 -4.84539 | gap 1, overlap 2200505 TCGGTATCCAACCTC TGGCGGTGT-CAAC GCCT GTTGTGCACAGCCA TTTTCTGTTTCATTC purF 2199832 - 2201811 + | amidophosphoribosyltransferase HQ2894A 2202677 - 2201952 - | hypothetical protein rpoF 2203067 - 2202711 - | DNA-directed RNA polymerase subunit F rpl21R 2203470 - 2203180 - | 50S ribosomal protein L21e TERM 1052 2203208 - 2203220 + g 77 -4.7 -4.89567 | CGGAGATGTGCTGGG CGCGC GAT GAGCG TTTTCTCTTTTCCAC HQ2897A 2203593 - 2203868 + | hypothetical protein ef1B 2204315 - 2204049 - | elongation factor 1-beta HQ2899A 2204497 - 2204318 - | Zn-ribbon RNA-binding protein HQ2900A 2206035 - 2204680 - | hypothetical protein TERM 1053 2205223 - 2205239 + g 79 -2.2 -5.47218 | opp_overlap 2205225, overlap 2205225 ACCACCAGCACCAGC AAGTGC TGCTC GCACTG TTTTTTTCCCTGAAA rpl12p 2206607 - 2206263 - | 50S ribosomal protein L12P rplP0 2207798 - 2206719 - | acidic ribosomal protein P0 TERM 1054 2207438 - 2207461 + g 91 -13.2 -3.46647 | overlap 2207436 CATTTGGTGCGACCT CACCAGCACT GATT GGTGCTGGTG TCTTTGATGCCTCAA rpl1P 2208433 - 2207795 - | 50S ribosomal protein L1P HQ2904A 2208732 - 2209022 + | hypothetical protein birA 2210299 - 2209325 - | biotin--[acetyl-CoA-carboxylase] ligase accA2 2212326 - 2210482 - | biotin carboxylase 1, acyl-CoA carboxylase, alpha subunit 2 TERM 1055 2211381 - 2211369 - G 75 -6.2 -4.65263 | ATTGCTCAAAAGAAA GCGG TTCAC CCGC GGCAACGCGCAGTTG TERM 1056 2211501 - 2211481 - G 83 -4.7 -5.18371 | overlap 2211498 CTCCATAAAATAAAA TTCCCCATC CTC AACGAGGAA CTCAACTGTTCCAGC TERM 1057 2211858 - 2211887 + g 75 -10.1 -3.34895 | CACCCTCTGCTTTGA TTGCGACTGGATA CCCA TATTCAGCCGCAA TTGATTCCACCTCAG asd 2212609 - 2213643 + | aspartate-semialdehyde dehydrogenase serA 2214872 - 2213853 - | phosphoglycerate dehydrogenase TERM 1058 2214514 - 2214554 + g 100 -17 -2.88544 | overlap 2214516 GGACCGTGGACACCC GAGGCATTTGTGACGGCA ATATC TGCAGTCTCAAATGCCTC TGTCTGGAGATGACC TERM 1059 2214516 - 2214552 + g 86 -13.8 -2.99471 | overlap 2214514 ACCGTGGACACCCGA GGCATTTGTGACGGCA ATATC TGCAGTCTCAAATGCC TCTGTCTGGAGATGA fixC 2215021 - 2216454 + | electron-transferring-flavoprotein dehydrogenase HQ2911A 2217345 - 2217587 + | hypothetical protein HQ2912A 2217584 - 2217967 + | integrase/recombinase HQ2913A 2218549 - 2218223 - | hypothetical protein HQ2914A 2218854 - 2218555 - | hypothetical protein TERM 1060 2218589 - 2218610 + g 83 -9.5 -4.2717 | gap 1, overlap 2218577 CCCGCCGCAAGCGCA CGGCTCTGCT CGG AG-AGAGCCG TTTTGGTGGCCTCCT HQ2915A 2219174 - 2219662 + | cell surface glycoprotein HQ2916A 2220253 - 2219756 - | hypothetical protein HQ2917A 2220807 - 2220379 - | hypothetical protein agxT 2222515 - 2221406 - | aminotransferase class V (Serine--pyruvate aminotransferase 2; alanine--glyoxylate aminotransferase 2) TERM 1061 2222309 - 2222297 - G 73 -7.7 -4.09739 | TGAAGTCTCCCAAAA CTCAG TCC CTGAG GCAGTGAGAATAATG msrB 2222731 - 2223192 + | peptide methionine sulfoxide reductase (R-form specific) rpl11p 2223922 - 2223449 - | 50S ribosomal protein L11P celM 2225128 - 2224058 - | cellulase; endo-1,3(4)-beta-glucanase HQ2924A 2225332 - 2225135 - | hypothetical protein TERM 1062 2225450 - 2225478 + G 74 -9.5 -3.4529 | opp_overlap 2225450 CCTTGTGCAATTGAA CGACGTGCAACGG TCA CAGTTGAGCGTCG TTCTGATGATCATAT TERM 1063 2226106 - 2226076 - g 80 -8.2 -4.47328 | opp_overlap 2226096 AACGTTATTACAAAA TGCCAACCCAGAGA CCA CCCCTGGGCAAGCA CTACTCACGGAGCTT mvk 2225360 - 2226376 + | mevalonate kinase HQ2926A 2226379 - 2227269 + | amino acid kinase elaC 2228192 - 2227335 - | ribonuclease Z (RNase Z) (tRNA 3 endonuclease) TERM 1064 2229568 - 2229590 + G 70 -7.8 -3.8062 | AAGTCTTGAACTCGG GATTGATATG CCG CATGTCGATC TTGTTGTCCAGGTTG lhr 2228324 - 2231209 + | ATP-dependent helicase dna2 2234234 - 2231412 - | DNA2-like DNA replication helicase HQ2931A 2234374 - 2234949 + | hypothetical protein TERM 1065 2235322 - 2235300 - g 84 -13.4 -2.64155 | opp_overlap 2235300, overlap 2235297 2235296 CTGTTTTCAAAGGCA GAGCGTCGGG ATA CCCGACGATC TTGAATTAGTAAATC TERM 1066 2235300 - 2235322 + G 88 -13.4 -3.21199 | opp_overlap 2235300 2235297 2235296 CTGTTTTCAAAGGCA GAGCGTCGGG ATA CCCGACGATC TTGAATTAGTAAATC HQ2932A 2235081 - 2235326 + | hypothetical protein HQ2933A 2236457 - 2235450 - | hypothetical protein rps2P 2237516 - 2236677 - | 30S ribosomal protein S2 eno 2238718 - 2237513 - | phosphopyruvate hydratase TERM 1067 2238124 - 2238112 - G 76 -9.1 -3.85698 | opp_overlap 2238117 CCTCGGCGTCAGAAA TGGGC GGT GCCCA TGCGCCTTCATCACC rpoK 2238918 - 2238721 - | DNA-directed RNA polymerase subunit K rpoN 2239567 - 2239373 - | DNA-directed RNA polymerase subunit N rps9p 2239978 - 2239580 - | 30S ribosomal protein S9P rpl13p 2240409 - 2239972 - | 50S ribosomal protein L13P TERM 1068 2240208 - 2240234 + g 85 -11.6 -3.73224 | ATGGGTATGCAGGTC CCTGATCAGAAC CAA GCTCTGATCGGG TTTCATACACACTCA rpl18R 2240756 - 2240406 - | 50S ribosomal protein L18e rpoD 2241994 - 2241206 - | DNA-directed RNA polymerase subunit D rps11p 2242396 - 2242001 - | 30S ribosomal protein S11P TERM 1069 2242113 - 2242128 + g 75 -5.4 -4.6971 | gap 1, opp_overlap 2242093, overlap 2242116 CGGATTGTCGCCTGT GCACCTG GTC CAGG-GC TTTTATTCCCGTTTC rps4p 2242930 - 2242403 - | 30S ribosomal protein S4 rps13p 2243467 - 2242946 - | 30S ribosomal protein S13P stt3 2244015 - 2246123 + | transmembrane oligosaccharyl transferase HQ2946A 2246301 - 2246501 + | hypothetical protein guaA 2247257 - 2246553 - | guanosine monophosphate synthetase (glutamine-hydrolyzing) (GMP synthase) moaA 2248503 - 2247532 - | molybdenum cofactor biosynthesis protein A TERM 1070 2248486 - 2248463 - G 73 -10.2 -3.18571 | opp_overlap 2248462, overlap 2248461 2248457 TCGGTCAAAGAGACA CGGACGCCAG ACAC CTCGCGCCCG AATTCATCTTCGAGC mrp 2248648 - 2249688 + | ATP-binding protein Mrp HQ2950A 2250962 - 2250432 - | hypothetical protein HQ2951A 2251380 - 2251084 - | hypothetical protein cdc6_ 2252574 - 2253122 + | cell division control protein HQ2953A 2253141 - 2253530 + | cell division control protein cdc6-like protein HQ2954A 2253892 - 2255130 + | IS1341-type transposase TERM 1071 2255118 - 2255138 + F 76 -11.8 -2.52543 | opp_overlap 2255110 2255118 2255117 CATTGAACCAGGAAG CCCCGGGG CTTGA CCTCGGGG TGAGTTCACGCGGCT TERM 1072 2255138 - 2255118 - f 70 -10.3 -2.5664 | opp_overlap 2255118, overlap 2255110 2255117 CATTGAACCAGGAAG CCCCGGGGC TTG ACCTCGGGG TGAGTTCACGCGGCT HQ2955A 2255181 - 2255468 + | cell division control protein cdc6-like protein HQ2956A 2256429 - 2257049 + | hypothetical protein HQ2957A 2257354 - 2257611 + | hypothetical protein HQ2958A 2257657 - 2258064 + | hypothetical protein TERM 1073 2258394 - 2258376 - T 71 -3.9 -4.80959 | gap 1 TAATGTATAATAAAA CTACCTAC TGGT GT-GGTAG CGGTGGCGTTGCCAG cdc6_ 2259895 - 2258609 - | cell division control protein cdc6-like protein HQ2960A 2260970 - 2260719 - | hypothetical protein HQ2961A 2262455 - 2261949 - | protein N-acetyltransferase-like protein livH 2262733 - 2263839 + | ABC-type branched-chain amino acid transport system, permease protein I TERM 1074 2264356 - 2264366 + G 73 -8.2 -3.82031 | TCAATCTTGCTGGTC GCCG CGT CGGC TTTGGTGGTGGTTCA livM 2263836 - 2265269 + | ABC-type branched-chain amino acid transport system, permease protein II livG 2265262 - 2266122 + | ABC-type branched-chain amino acid transport systems, ATP-binding protein I TERM 1075 2266852 - 2266832 - g 73 -5.4 -4.63932 | GATGGTTGAACAAAA CGCCAAAG AGGCA CTTCAGCG ATGTGATCGTGGCTA livF 2266119 - 2266958 + | ABC-type branched-chain amino acid transport systems, ATP-binding protein II HQ2966A 2268296 - 2267538 - | hypothetical protein TERM 1076 2267736 - 2267715 - G 83 -9.5 -4.20516 | TTGTGAGTCAAGAAA TGCAACATC ATAT GATGCTGCA CTCGCGCGATCGGTG HQ2967A 2269031 - 2268396 - | hypothetical protein HQ2968A 2269232 - 2269384 + | hypothetical protein livJ 2271023 - 2269647 - | ABC-type branched-chain amino acid transport systems, substrate-binding protein HQ2971A 2271649 - 2271344 - | hypothetical protein TERM 1077 2271619 - 2271633 + g 76 -11.4 -2.82516 | opp_overlap 2271598 2271629 GTTCGTCGAGTATGT CCCGCA CAA TGCGGG TCTCCTGCTGAGACA TERM 1078 2271786 - 2271802 + r 77 -7.3 -4.50159 | opp_overlap 2271785 2271786, overlap 2271787 ATCCAGCCTGAAAAC TTCGACA GAG TGTCGAG TTTATTTCAGTTCCA TERM 1079 2272171 - 2272144 - R 72 -6.4 -4.30978 | gap 1, opp_overlap 2272136 GGTAAGCTAGCAAAA CTGCTGTGTCTCT GTC AGATACACAG-AG ATAATCGTCGGAATA HQ2973A 2273263 - 2272940 - | hypothetical protein HQ2974A 2273668 - 2274753 + | metal-dependent hydrolase of the TIM-barrel fold TERM 1080 2274807 - 2274839 + G 72 -10.6 -2.9294 | GACCGCGTTAGTGAC CCCGAGCTTGATGA GTCAA TCGTCGAACTCGGG TATGTCGATCATATC HQ2975A 2274759 - 2275547 + | hypothetical protein TERM 1081 2275878 - 2275895 + T 79 -2.7 -5.40464 | gap 1, overlap 2275881 2275882 AATGATTGTCGGTCG CAGTCGAG AAC CTCGG-TG TTTTTATTTATCATG HQ2976A 2276312 - 2276142 - | hypothetical protein TERM 1082 2276300 - 2276316 + g 70 -9.5 -3.136 | opp_overlap 2276299, overlap 2276299 2276297 CGCTCACGAGCACAG TGACATG AAC CATGTCA TCTATTGCGTATTGA HQ2977A 2277820 - 2277617 - | hypothetical protein HQ2978A 2278186 - 2277866 - | hypothetical protein TERM 1083 2279082 - 2279096 + r 71 -7 -4.10453 | opp_overlap 2279072, overlap 2279083 GACAACACCTGTCGC ACCGCC ACT GGCGGA TTTTGAGAGCATTTC TERM 1084 2279083 - 2279095 + r 73 -10.5 -3.0579 | opp_overlap 2279072, overlap 2279082 ACAACACCTGTCGCA CCGCC ACT GGCGG ATTTTGAGAGCATTT HQ2980A 2280054 - 2279551 - | hypothetical protein TERM 1085 2279917 - 2279967 + g 72 -11.1 -2.70022 | opp_overlap 2279908, overlap 2279913 CACAAACTCGTTGTC GAAGGCGATCCGAGCGAGGACTT GCCCG GAGTCCTCGCTCGGATAGGTCGC ATTGTCTGCGGTGCC TERM 1086 2280198 - 2280170 - R 76 -11.6 -2.52834 | opp_overlap 2280173, overlap 2280169 CACGGTACCAGGAAC GCGCTCGCACGG TGAAG CCGAGCGAGTGC TTGACGACCGAATTG TERM 1087 2280173 - 2280195 + r 73 -11.2 -2.70932 | opp_overlap 2280170 2280169 GGTACCAGGAACGCG CTCGCACGGT GAA GCCGAGCGAG TGCTTGACGACCGAA TERM 1088 2280409 - 2280388 - R 82 -13 -2.82015 | GCGAGACTGAGCAGA TCGCCCGC CGGAAC GCGGGCGA TCTGCGCACAGAGGT HQ2982A 2281705 - 2281451 - | hypothetical protein TERM 1089 2281548 - 2281570 + g 83 -4 -5.47218 | overlap 2281549 2281552 ACACGGACGCGATCG TGGAGCGGGA TGG TCACGCTGCG TTTTTTTACCTCCGG TERM 1090 2281812 - 2281840 + r 79 -11.7 -3.29144 | overlap 2281813 GGTCGCCACGGTCGT TCTCCACGGCGTC GAT GACGTCGTCGAGG TTGTCGAGGGCATCG TERM 1091 2281813 - 2281839 + r 80 -13 -2.57344 | overlap 2281812 GTCGCCACGGTCGTT CTCCACGGCGTC GAT GACGTCGTCGAG GTTGTCGAGGGCATC HQ2983A 2282216 - 2281983 - | hypothetical protein TERM 1092 2283234 - 2283224 - g 71 -6.8 -4.25104 | TGGCTTGCATGAAAA CGAC CTT GTCG ACACACATCTTATTG sqdB 2282820 - 2284010 + | UDP-sulfoquinovose synthase TERM 1093 2284937 - 2284919 - g 75 -6 -4.50241 | opp_overlap 2284921 AAATACCAACCAAAA TACACTCT TCA AGAGGGTA TTACAGAACTTGCAA galE 2284007 - 2285005 + | nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) galE 2285002 - 2285991 + | nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) HQ2987A 2286902 - 2286045 - | transcriptional regulator graD 2287560 - 2288759 + | glucose-1-phosphate thymidylyltransferase TERM 1094 2289049 - 2289068 + G 71 -8.6 -3.62597 | TGAGACTGGAGACGT TGCTGTTG TCCA CAACGGCA TTATTGAAAACTACC glmS 2288759 - 2290579 + | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 1095 2290934 - 2290945 + G 85 -5.8 -5.14563 | TACGATCATCCGGTT GTCC CGTC GGAC TTTTTTGATGCCGAG HQ2991A 2290892 - 2291968 + | hypothetical protein graD 2292439 - 2293650 + | glucose-1-phosphate thymidylyltransferase HQ2993A 2293953 - 2293711 - | hypothetical protein sdhA 2296285 - 2294438 - | succinate dehydrogenase, subunit A (flavoprotein) sdhB 2297214 - 2296342 - | succinate dehydrogenase, subunit B (iron-sulfur protein) sdhD 2297752 - 2297381 - | succinate dehydrogenase, subunit D (membrane anchor protein) sdhC 2298147 - 2297752 - | succinate dehydrogenase, subunit C (cytochrome b-556) HQ2998A 2298843 - 2298460 - | hypothetical protein HQ2999A 2299285 - 2299758 + | hypothetical protein TERM 1096 2299875 - 2299923 + T 70 -8.8 -3.30771 | overlap 2299878 2299878 2299880 GCGGTCTGAGACGGG TGCGGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCCTA TTCTCGACCATGTAC TERM 1097 2299878 - 2299921 + T 74 -10.3 -3.22102 | gap 1, overlap 2299875 2299878 2299880 GTCTGAGACGGGTGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTCTCGACCATGT TERM 1098 2299878 - 2299920 + T 78 -12.7 -2.5294 | overlap 2299878 2299875 2299880 GTCTGAGACGGGTGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTCTCGACCATG TERM 1099 2299880 - 2299918 + T 77 -11.7 -2.80074 | overlap 2299878 2299878 2299875 CTGAGACGGGTGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTCTCGACCA spoVR 2302516 - 2300501 - | spore cortext formation protein TERM 1100 2302403 - 2302387 - G 76 -9.5 -3.75024 | CGTCATGACCAACAA TCCAGTA GTT TACTGGA TATGGATCAAGTCCA HQ3001A 2304084 - 2302744 - | hypothetical protein prkA 2306351 - 2304075 - | serine protein kinase prkA 2308764 - 2306695 - | serine protein kinase HQ3004A 2309135 - 2309593 + | hypothetical protein HQ3005A 2310507 - 2309689 - | succinylglutamate desuccinylase-like protein HQ3006A 2310848 - 2311342 + | hypothetical protein TERM 1101 2311966 - 2311955 - g 71 -7.2 -4.03413 | ATGCTGTCACAGAAA GCCC AGTT GGGC TTGAAATCGACCCGA HQ3007A 2311546 - 2313003 + | beta,beta-carotene 9',10'-dioxygenase 2 HQ3008A 2313226 - 2313047 - | hypothetical protein HQ3009A 2313703 - 2313260 - | hypothetical protein guaD 2315190 - 2314177 - | nucleoside deaminase (cytosine deaminase, guanine deaminase) HQ3011A 2316617 - 2315382 - | hypothetical protein TERM 1102 2316807 - 2316782 - H 71 -3.3 -4.88736 | gap 1 TAGTAGGTATAAAAA CGGCTGAGCATA GGA TACGAT-AGCCG TTGAGAGAATATTGA TERM 1103 2317436 - 2317422 - g 88 -11.4 -3.89938 | AGAATGAAAGTGAAA CCGCTG AGA CAGCGG CTGAGATAATGCATT HQ3012A 2316848 - 2317909 + | LPPG:FO 2-phospho-L-lactate transferase HQ3013A 2317909 - 2318685 + | tRNA-dihydrouridine synthase TERM 1104 2319078 - 2319098 + G 73 -10.5 -3.21416 | overlap 2319096 CCGCAGGCGTTCGTT CTGTTGTTG AAT CAACGACAG TTGCTGATGCGGCTG citG 2318744 - 2319601 + | triphosphoribosyl-dephospho-CoA synthase HQ3015A 2319607 - 2320356 + | hypothetical protein TERM 1105 2320515 - 2320504 - g 78 -5.8 -4.71791 | overlap 2320505 AGACCAATAAAGAAA GCGT TGAG ACGC TAACGAATGTCGAAT rps17E 2320407 - 2320610 + | 30S ribosomal protein S17e HQ3017A 2321217 - 2320921 - | acc operon protein accA 2322773 - 2321223 - | acetyl-CoA carboxylase alpha subunit TERM 1106 2322543 - 2322568 + g 91 -11.9 -4.20516 | opp_overlap 2322537 2322548 ATCACCATACCCCGT GACAACCCCAT CGCC AGGGGGTTGTC TTTCTTCCATGCCGA HQ3019A 2323010 - 2323222 + | hypothetical protein bcp 2323415 - 2323900 + | peroxiredoxin homolog, bacterioferritin comigrating protein ilvD 2326070 - 2324280 - | dihydroxy-acid dehydratase TERM 1107 2325906 - 2325877 - G 81 -12.9 -2.64933 | gap 1 CAGGGAGTGATATCA GCCGCTGGATTGGC AAT GCCAA-CCATCGGC GAGGATAGATCTGTA moaB 2326819 - 2326145 - | molybdenum cofactor biosynthesis protein B HQ3023A 2327914 - 2326904 - | hypothetical protein TERM 1108 2327381 - 2327363 - G 73 -7.4 -4.15044 | overlap 2327364 TGCCTGTTTAATAAA TCCTGAAC GGA GTTCAGGC GCTGCGAGTAGTGTC TERM 1109 2327380 - 2327364 - G 74 -10.9 -3.08812 | overlap 2327363 GCCTGTTTAATAAAT CCTGAAC GGA GTTCAGG CGCTGCGAGTAGTGT qor 2328035 - 2329075 + | NADPH:quinone reductase HQ3025A 2329065 - 2329313 + | hypothetical protein TERM 1110 2329319 - 2329340 + F 73 -11.5 -2.61695 | overlap 2329318 AACGGATTGACATCC TCCCCGCGC TGAA GCGCGAGGA CTCTTTCGGGGTAGC HQ3026A 2329537 - 2329887 + | hypothetical protein HQ3027A 2330115 - 2331032 + | hypothetical protein TERM 1111 2331210 - 2331194 - T 78 -5.1 -4.9218 | overlap 2331196 GAGGGATGATAAAAA TTCCATG TCA CATGGGA GCGTATTTGATTATT HQ3028A 2332856 - 2331246 - | hypothetical protein pspA 2333881 - 2333051 - | stress response protein HQ3030A 2333935 - 2334582 + | hypothetical protein HQ3031A 2335151 - 2334780 - | cobalamin operon protein cbiX 2336422 - 2335166 - | cobalamin cluster protein CbiX ( ferredoxin-like iron-sulfur protein) HQ3032B 2337197 - 2336415 - | cobalamin operon protein cbiH2 2338424 - 2337357 - | precorrin-3B C17-methyltransferase 2 cbiH1 2339318 - 2338458 - | precorrin-3B C17-methyltransferase 1 cbiG 2340283 - 2339315 - | cobalamin biosynthesis protein G, CbiG asnA 2341276 - 2340428 - | asparaginase HQ3037A 2343116 - 2341452 - | hypothetical protein TERM 1112 2342119 - 2342099 - G 76 -9.6 -3.74361 | opp_overlap 2342093 GATACTCATCAATAA GCCGGCGG TTTTC CCGGCGGC GAGTTGTTCTAGCAA TERM 1113 2342378 - 2342391 + g 70 -8.1 -3.95986 | opp_overlap 2342348 2342373 2342375 2342377 AACCGATAATGACAC CACGC GTCG GCGTG TTTGATTGGATTCCA HQ3038A 2343683 - 2343363 - | hypothetical protein HQ3039A 2343807 - 2344211 + | stress response protein HQ3040A 2345418 - 2344279 - | hypothetical protein TERM 1114 2345504 - 2345519 + r 76 -4 -5.03945 | overlap 2345497 TATCCTCCCGTGCCC GAAGAC GCGA GTTTTC TTTTTGTAATTCTTG HQ3041A 2345920 - 2345573 - | hypothetical protein TERM 1115 2345798 - 2345821 + g 80 -8.2 -4.39998 | overlap 2345794 TTGATTTACATCGGA TCTGATGGCA ACAT TGACATCAGA TTTGTTGTATGAATG TERM 1116 2346402 - 2346420 + G 72 -10.2 -3.03865 | opp_overlap 2346373 2346368, overlap 2346401 TGGTGCCGAGACCGT CGTTGGCG TGA CGCCATCG CTTTCGTTTCAGATA mobB 2346193 - 2346699 + | molybdopterin-guanine dinucleotide biosynthesis protein B HQ3043A 2347794 - 2346928 - | hypothetical protein TERM 1117 2347096 - 2347078 - G 83 -7.4 -4.75372 | ATCACGGAGTAAAAA CACAACCG TGT CGTTTGTG AGTGTAGCTGCAAGA HQ3044A 2347918 - 2348997 + | transporter of the drug/metabolite transporter (DMT) superfamily HQ3045A 2349200 - 2350291 + | hypothetical protein HQ3046A 2350794 - 2350378 - | coaE operon protein coaE 2351451 - 2350858 - | dephospho-CoA kinase TERM 1118 2351578 - 2351598 + r 100 -14.7 -4.1822 | opp_overlap 2351575 GCCCAGAGTGAACTG CTCCGGGGT CAA GCCCCGGAG TTTCTTCCAGTAGAG TERM 1119 2352482 - 2352502 + r 83 -14 -2.74012 | opp_overlap 2352475 2352474 CCCCAAACGGTGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACATACTAA thsA 2355142 - 2353451 - | thermosome, alpha subunit HQ3050A 2355340 - 2356125 + | hypothetical protein HQ3051A 2356816 - 2356274 - | putative RNA-processing protein TERM 1120 2356789 - 2356802 + g 70 -8.1 -3.82208 | TGAGTACGCCGATAC GGTCC TGAG GGACC TTTACGTGTTTCATA TERM 1121 2357529 - 2357508 - R 82 -10.9 -3.57798 | gap 1, overlap 2357510 CAGAATCAAGGAGAA TACCTGCGGC TCA GCCGCAGG-A TGAATCCGACAACTC TERM 1122 2357528 - 2357510 - R 100 -16 -3.35476 | overlap 2357508 GAATCAAGGAGAATA CCTGCGGC TCA GCCGCAGG ATGAATCCGACAACT crcB 2358607 - 2358200 - | protein crcB-like protein crcB 2358945 - 2358604 - | protein crcB-like protein TERM 1123 2359137 - 2359110 - R 73 -2.2 -5.22006 | gap 1, opp_overlap 2359117, overlap 2359112 2359125 TCATCATAATAAAAA TG-TCAACCATTA ATA TAATGATTAATCA CTAACTCGTGGACTG TERM 1124 2359154 - 2359168 + r 70 -10 -3.10533 | overlap 2359152 TAACTCGTGGACTGG CACCAC CAT GTGGTG TATCTCGTTTTCGAA HQ3054A 2360189 - 2359131 - | hypothetical protein HQ3055A 2360265 - 2360717 + | hypothetical protein TERM 1125 2360705 - 2360729 + T 76 -8.7 -4.18934 | overlap 2360707 TACTGATATTCTAAT TGTCGATGAGT GAC ACTCATTGATA TTTCTTCCAATGCTC TERM 1126 2360707 - 2360727 + T 76 -9.1 -3.69068 | overlap 2360705 CTGATATTCTAATTG TCGATGAGT GAC ACTCATTGA TATTTCTTCCAATGC HQ3056A 2362631 - 2361243 - | hypothetical protein HQ3058A 2363076 - 2364053 + | hypothetical protein grx 2364393 - 2364142 - | glutaredoxin HQ3060A 2366619 - 2365450 - | serine/threonine protein kinase related protein HQ3061A 2367653 - 2367096 - | hypothetical protein HQ3062A 2368672 - 2369946 + | IS1341-type transposase TERM 1127 2370658 - 2370679 + G 70 -9.5 -3.21036 | gap 1, overlap 2370656 2370673 CAGATTCTTTATCAT CTCCAGCGTG ATG CACG-TGGAG TCTCTTCTCGTGATA lrp 2370610 - 2371137 + | transcription regulator hop 2372791 - 2371913 - | halorhodopsin TERM 1128 2372972 - 2372958 - R 78 -5.8 -4.91109 | opp_overlap 2372960 TCTGGATGATAAAAA TATGAA AGC TTCATA TTCCGCGTGTTCAAT HQ3065A 2375174 - 2373114 - | superfamily II helicase HQ3066A 2375341 - 2376519 + | metalloprotease HQ3067A 2377359 - 2376700 - | hypothetical protein HQ3068A 2377585 - 2378862 + | hypothetical protein HQ3069A 2379411 - 2379046 - | hypothetical protein TERM 1129 2379305 - 2379327 + g 73 -7.7 -4.10164 | CAAACCCACACGTAC GGTGCATCT CCATC AGGTGCGCC TTTGTATGATGGTGC HQ3070A 2379509 - 2381464 + | ATPase HQ3071A 2381672 - 2382019 + | hypothetical protein TERM 1130 2382554 - 2382586 + F 71 -9.7 -3.23853 | opp_overlap 2382551, overlap 2382552 2382555 GGGCGGAGTGAAGCC GCCGACCTCCACGGG CTC CTCGCGGAGTTCGGG TGTTAATTCCAGCCG TERM 1131 2382555 - 2382585 + F 80 -13.2 -2.54098 | opp_overlap 2382551, overlap 2382554 2382552 GGCGGAGTGAAGCCG CCGACCTCCACGGG CTC CTCGCGGAGTTCGG GTGTTAATTCCAGCC TERM 1132 2382672 - 2382692 + F 83 -14 -2.73721 | opp_overlap 2382664 2382665, overlap 2382664 CCCCAAACGGTGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACGATTGCT uvrA 2382915 - 2385971 + | excinuclease ABC chain A HQ3073A 2386114 - 2386494 + | hypothetical protein TERM 1133 2387808 - 2387850 + T 79 -12.7 -2.79272 | overlap 2387808 2387805 2387810 GGCGGGGGCGGGGGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTTTGACCATAT TERM 1134 2387808 - 2387851 + T 83 -10.3 -3.66256 | gap 1, overlap 2387805 2387808 2387810 GGCGGGGGCGGGGGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTTTGACCATATA TERM 1135 2387810 - 2387848 + T 78 -11.7 -2.93891 | overlap 2387808 2387808 2387805 CGGGGGCGGGGGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTTTGACCAT tif5B 2390218 - 2388356 - | translation initiation factor IF-2 TERM 1136 2389731 - 2389741 + g 73 -5.4 -4.49556 | GGAGTCCATCCCGGA GTTG TAT CAAC TTTATTTGCTGCAAC HQ3075A 2390359 - 2390604 + | hypothetical protein HQ3076A 2390625 - 2391083 + | hypothetical protein TERM 1137 2391853 - 2391825 - g 70 -2.4 -4.88918 | gap 1, opp_overlap 2391834, overlap 2391826 2391828 2391829 CTACCGCAAAGAAAA CTACTACGACGAC GAGG GTCGTCGT-GTCC ACGAAGAACACCCAC HQ3077A 2391511 - 2392824 + | IS1341-type transposase HQ3078A 2393996 - 2393247 - | hypothetical protein HQ3079A 2394595 - 2394260 - | azlC associated membrane protein azlC 2395329 - 2394595 - | branched-chain amino acids ABC transporter permease,azaleucine resistance protein TERM 1138 2396074 - 2396051 - R 78 -6.6 -4.55491 | opp_overlap 2396050 2396052, overlap 2396052 GAGGGAATTAGAAAA GCCACGGGTC ACCA GACCTGTGGT CGTTTACGCTACTTA TERM 1139 2396073 - 2396052 - R 73 -10.1 -3.32572 | opp_overlap 2396050 2396052, overlap 2396051 AGGGAATTAGAAAAG CCACGGGTC ACCA GACCTGTGG TCGTTTACGCTACTT TERM 1140 2396052 - 2396073 + r 79 -12.3 -2.93357 | opp_overlap 2396052 2396051, overlap 2396050 AGGGAATTAGAAAAG CCACGGGTC ACCA GACCTGTGG TCGTTTACGCTACTT HQ3082A 2397215 - 2396907 - | hypothetical protein HQ3083A 2398068 - 2397253 - | hypothetical protein TERM 1141 2398541 - 2398561 + r 83 -14 -2.74756 | opp_overlap 2398533 2398534, overlap 2398534 2398532 CCCCAAACGGTGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACGTGCTTT nudF 2399384 - 2398824 - | ADP-ribose pyrophosphatase; Mut/nudix family protein TERM 1142 2399237 - 2399225 - G 78 -9.1 -4.01101 | opp_overlap 2399224, overlap 2399219 TAAATGGAAGAATAA CCACC GCT GGTGG CTCTTCAACAGAATG HQ3085A 2401556 - 2400234 - | hypothetical protein TERM 1143 2401605 - 2401593 - R 71 -7.7 -3.93148 | overlap 2401591 ACGAGGTGAAAAACA GTTCG ATG CGAAC ACGAATATATCAGGA gloA 2402054 - 2401653 - | lactoylglutathione lyase HQ3087A 2402784 - 2403896 + | hypothetical protein HQ3088A 2404530 - 2403985 - | hypothetical protein HQ3089A 2405101 - 2404532 - | hypothetical protein HQ3090A 2406346 - 2405312 - | hypothetical protein TERM 1144 2405722 - 2405738 + g 73 -8 -4.01888 | GAACAACACGGTCAA TCCCCT GAGAA AGGGGA TTTCTGCTCTCAGCT sppA 2407304 - 2406387 - | protease IV; endopeptidase IV; signal peptide peptidase TERM 1145 2406563 - 2406545 - G 73 -5.3 -4.54026 | gap 1, opp_overlap 2406546, overlap 2406547 TTGCAAAGAAAATAA GA-CCACC ACGT GGTGGCTC CTTCCGTGCGATATC TERM 1146 2406560 - 2406547 - G 70 -8.1 -3.86571 | opp_overlap 2406546, overlap 2406545 GCAAAGAAAATAAGA CCACC ACGT GGTGG CTCCTTCCGTGCGAT TERM 1147 2407190 - 2407166 - G 76 -8.5 -4.08706 | CTGTGATTACAGAAA CGGTCCCCTCA GAC TGAGCGGACTG CGCATAGTCGTAAGC HQ3092A 2408303 - 2407530 - | ABC-type transport system, permease protein TERM 1148 2408074 - 2408054 - G 71 -6.9 -4.21462 | opp_overlap 2408053, overlap 2408056 ATCGACCATGGAAAA TAGAGAATG AGG CATTCTCAA ATGCGTTCGAAATAG TERM 1149 2408072 - 2408056 - G 76 -9.5 -3.70674 | opp_overlap 2408053, overlap 2408054 CGACCATGGAAAATA GAGAATG AGG CATTCTC AAATGCGTTCGAAAT HQ3093A 2409256 - 2408306 - | ABC-type transport system, ATP-binding protein TERM 1150 2408866 - 2408876 + g 74 -6.8 -4.43213 | opp_overlap 2408865 AAAGCCAGTCAAATC GCGT ATT ACGC TTTTCATATATTCCC TERM 1151 2410015 - 2410002 - g 74 -3.8 -4.87626 | opp_overlap 2410002 CGTGAATATGAAAAA GCAG GTGTGG CTGC TGTTCATATCGAAGA aceA 2409648 - 2410682 + | isocitrate lyase HQ3095A 2411282 - 2412619 + | hypothetical protein TERM 1152 2412931 - 2412947 + G 81 -12.3 -3.05596 | CGCTTCGACGCGTAG GCGTCTC CGA GAGACGC TTGAGTCACACACTG TERM 1153 2413143 - 2413157 + G 76 -10 -3.74361 | opp_overlap 2413142 CACGCTTTGCAACAC GTCTCG AAT CGAGAC TTATTGATGAATGTA TERM 1154 2413408 - 2413396 - g 70 -7.7 -3.89055 | ATACATTCGCACAAA TGGGA AAG TCCCA GCATGTGCAAGGCGT rnhB 2412791 - 2413486 + | ribonuclease HII TERM 1155 2413731 - 2413716 - T 71 -10.4 -2.70932 | CCCCGTCTTCAAGGA GCCTGC GTCA GCAGGC GAGTAGAGTAAGCTA secD 2415347 - 2413785 - | preprotein translocase subunit SecD secF 2416219 - 2415344 - | preprotein translocase subunit SecF TERM 1156 2416555 - 2416575 + r 73 -11.1 -2.71918 | overlap 2416554 2416551 GCACCTGCTGGAGCG GCATCCCGA GAT TCGGGAGGC GTATTTCTGGGGTGG HQ3099A 2417282 - 2416791 - | hypothetical protein HQ3100A 2417996 - 2417457 - | hypothetical protein TERM 1157 2417713 - 2417690 - G 72 -11.1 -2.52023 | overlap 2417677 2417689 2417687 2417692 CAGCCACAGCAACAG CAGCTTCGA GTCGTT TCGAAGCTG TCAGTCCACGACGGT TERM 1158 2417812 - 2417799 - G 70 -2.3 -4.83518 | overlap 2417800 AACAACAACATAAAA TGCTC GTGA GAGCG TAAGAGACCCTCCTT TERM 1159 2418085 - 2418100 + H 76 -7.6 -4.2558 | opp_overlap 2418076 2418085 2418084 TACAATTAGAAAATT CCTACT CACC AGTAGG TTTTCATGACCAATC pgi 2418532 - 2419824 + | glucose-6-phosphate isomerase kefC 2419958 - 2421823 + | potassium transport protein kefC HQ3103A 2422241 - 2421858 - | hypothetical protein TERM 1160 2423185 - 2423173 - g 78 -7.7 -4.44046 | GCGATTGCAAACAAA CGCAA CGA TTGCG GCTGCCGTTGAGGAT HQ3104A 2422751 - 2424226 + | AAA-type ATPase phnP 2424238 - 2425062 + | PhnP-like protein HQ3106A 2425949 - 2425077 - | hypothetical protein TERM 1161 2425969 - 2425990 + r 74 -8.7 -3.93256 | GCAGCGCCAAGCTGT CGACTGAGT ACCC ACTCTGTCG TTGTTTCAAGATATG TERM 1162 2426159 - 2426169 + r 85 -5.4 -5.28176 | opp_overlap 2426159 GACAGTATGTATATA TCTG ATT CAGA TTTTTTGTGAATGCC nifUx 2426763 - 2426341 - | NifU domain-containing protein glcK 2427820 - 2426852 - | glucokinase HQ3109A 2428476 - 2428096 - | hypothetical protein HQ3110A 2429772 - 2428768 - | hypothetical protein HQ3111A 2429977 - 2430276 + | hypothetical protein gcvT 2430418 - 2431539 + | aminomethyltransferase, glycin cleavage system T protein HQ3113A 2433352 - 2432270 - | electron-transferring-flavoprotein dehydrogenase / geranylgeranyl hydrogenase-like protein pdaD 2433921 - 2433415 - | pyruvoyl-dependent arginine decarboxylase pan1 2435281 - 2434049 - | proteasome-activating nucleotidase TERM 1163 2434474 - 2434485 + g 71 -4.4 -4.74453 | TTCGTTGAACTTCAG CATC TCCG GATG TTTTTGAGTCTGTTC dcd 2435829 - 2435356 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 1164 2436698 - 2436680 - g 85 -6 -5.05113 | CGTACATAAAGAAAA CTTTGCAG CGC CTGGAAAG ACACTTCTTGGGTCT citB 2436360 - 2438336 + | aconitate hydratase rimI 2438406 - 2438897 + | protein N-acetyltransferase TERM 1165 2439963 - 2439950 - g 73 -8.1 -4.07535 | opp_overlap 2439949 AATGTTGATAAAGAA CACCC GGTC GGGTG GCTTTCGCGGGAAGA TERM 1166 2440079 - 2440095 + G 75 -11.5 -2.74371 | overlap 2440075 2440081 CCTGTTGACGTTGCT GGGGCGG ACA CCGCCTC TCATGTTGCAGCCTT TERM 1167 2440081 - 2440093 + G 71 -10.5 -2.9155 | overlap 2440079 2440075 TGTTGACGTTGCTGG GGCGG ACA CCGCC TCTCATGTTGCAGCC HQ3119A 2439233 - 2440342 + | NAD/FAD-dependent oxidoreductase HQ3120A 2440407 - 2441183 + | hypothetical protein TERM 1168 2442404 - 2442386 - T 77 -10.2 -3.30474 | opp_overlap 2442387, overlap 2442379 2442387 TCGTAGAAGCAGGAA GCCCCGCC CTC AGCGAGGC CATCAGGCCGAGCAG TERM 1169 2442426 - 2442387 - T 76 -12.1 -2.57963 | gap 2, opp_overlap 2442387, overlap 2442379 2442386 CGTAGAAGCAGGAAG CCCCGCCCTCAGCGAGGCC ATCA GGCCGAGC--AGGGCGGGG TAGTTCACAGCCGGC TERM 1170 2442387 - 2442426 + T 76 -12.1 -2.70932 | gap 2, opp_overlap 2442379 2442386 2442387 CGTAGAAGCAGGAAG CCCCGCCCTCAGCGAGGCC ATCA GGCCGAGC--AGGGCGGGG TAGTTCACAGCCGGC nirD 2443571 - 2442501 - | heme biosynthesis protein nirD/L (nirH/nirG homolog) TERM 1171 2443836 - 2443799 - H 75 -11.1 -3.05343 | GGTATAGGTTGAACA GGCGCAATCCCACGTCG TTTA CGGCGTGGATACGCGCC GTCAGACGGAGACGG TERM 1172 2444281 - 2444295 + H 79 -9.2 -4.07568 | TCAGCGGTGCGGTAC CGTGGG AGT CCCGCG TTTTCAGGCGCAGGG trpD 2444441 - 2445520 + | anthranilate phosphoribosyltransferase ppiA 2445734 - 2446273 + | peptidylprolyl isomerase HQ3124A 2446361 - 2446744 + | hypothetical protein TERM 1173 2447321 - 2447331 + F 78 -5.4 -4.82901 | GGCACGACTGTCCGA GAGT CAA ACTC TTTTTATGACCGACC cofG 2447363 - 2448541 + | FO synthase subunit 1 HQ3126A 2449130 - 2448582 - | hypothetical protein thiH 2450754 - 2449342 - | FO synthase subunit 2 TERM 1174 2450979 - 2451027 + H 70 -8.8 -3.38768 | overlap 2450982 2450982 2450984 TGAGGCGGGTGCGGG TGCGGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCCTA TTCTCGATCATATAC TERM 1175 2450982 - 2451024 + H 78 -12.7 -2.55216 | overlap 2450979 2450982 2450984 GGCGGGTGCGGGTGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTCTCGATCATA TERM 1176 2450982 - 2451025 + H 74 -10.3 -3.26164 | gap 1, overlap 2450982 2450979 2450984 GGCGGGTGCGGGTGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTCTCGATCATAT TERM 1177 2450984 - 2451022 + H 77 -11.7 -2.81045 | overlap 2450982 2450982 2450979 CGGGTGCGGGTGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTCTCGATCA purC 2451791 - 2452870 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1178 2452955 - 2452937 - T 82 -11.8 -3.30854 | AATAACTCACACTAA GCGTCAAT TTA ATTGACGC ACTACGGATCGAGTG TERM 1179 2453068 - 2453052 - T 72 -5.9 -4.38712 | GCGAGTCGGATAAAA TGAGATA CTT CATCTCA ATGCTAAGATATTAC TERM 1180 2453131 - 2453115 - T 76 -4.4 -5.00267 | overlap 2453116 AAGTACAAAAAGAAA GCATCA CGCGT TGACGC CGGGATGAATCTGAC purU 2454421 - 2453438 - | formyltetrahydrofolate deformylase purS 2454695 - 2454970 + | phosphoribosylformylglycinamidine synthase, PurS component purQ 2454967 - 2455653 + | phosphoribosylformylglycinamidine synthase component I HQ3132A 2456047 - 2455817 - | hypothetical protein HQ3134A 2456855 - 2456685 - | hypothetical protein HQ3135A 2457222 - 2458439 + | cell surface protein/ lipoprotein-putative microfilarial sheath protein TERM 1181 2458509 - 2458490 - T 74 -10.7 -3.12005 | opp_overlap 2458499 CAGACAAGGCGAATA CCCCGAG GCTTGA CTCGGGG TGAGGTCAATATATG TERM 1182 2458574 - 2458622 + T 86 -13.2 -3.30474 | gap 2, opp_overlap 2458575, overlap 2458575 2458616 AGATACTCGTGAACT ACCCCGCCCT-ACTCA-GCAACGC TTC GCGTTGCTTCCGTGAGGGCGGGGC TTCCTGCTTCTACGA TERM 1183 2458621 - 2458575 - T 95 -16.7 -2.72049 | gap 2, opp_overlap 2458575 2458574 2458616 GATACTCGTGAACTA CCCCGCCCT-ACTCA-GCAACGC TTC GCGTTGCTTCCGTGAGGGCGGGG CTTCCTGCTTCTACG TERM 1184 2458575 - 2458621 + T 95 -16.7 -2.57963 | gap 2, opp_overlap 2458575, overlap 2458574 2458616 GATACTCGTGAACTA CCCCGCCCT-ACTCA-GCAACGC TTC GCGTTGCTTCCGTGAGGGCGGGG CTTCCTGCTTCTACG HQ3136E 2459944 - 2459882 - | IS1341-type transposase (nonfunctional,N-terminal part) HQ3137A 2461051 - 2460134 - | hydrolase ( hydroxyacylglutathione hydrolase) TERM 1185 2461373 - 2461357 - g 77 -6.5 -4.56775 | ACTGCTTCGTAAAAA CCCTGAT GCA ATCCGGG GAGCCCTTGATGAAA serS 2461328 - 2462710 + | seryl-tRNA synthetase HQ3139A 2462840 - 2463394 + | hypothetical protein TERM 1186 2463641 - 2463666 + F 73 -2.5 -5.1356 | gap 1, overlap 2463642 TAGATCATAGGATTT C-CGTACTTCTC CCT GAGACGAACGTG TTTTTATTGCTCGAC TERM 1187 2463642 - 2463664 + F 72 -6.2 -4.19587 | overlap 2463641 AGATCATAGGATTTC CGTACTTCTC CCT GAGACGAACG TGTTTTTATTGCTCG TERM 1188 2464069 - 2464056 - g 73 -4.5 -4.74013 | CGGAAACACAGAAAA CAAGC CTTT GCTCG GATGGCAGACCTCGT TERM 1189 2464561 - 2464540 - g 78 -5.1 -4.89477 | CCGTGAACAACAAAA GCGATCGAT CAGA AGCAATCGC TGCTGACTGTCAAAT HQ3140A 2463699 - 2464673 + | GTP-binding protein TERM 1190 2464692 - 2464711 + T 73 -4.4 -4.81083 | gap 1 ATACATTGTGTCTCA GTTTGCAGT CAA ACT-CAAAC TTTTTAATAATTACG HQ3141A 2466546 - 2465137 - | hypothetical protein TERM 1191 2466205 - 2466187 - G 71 -3.8 -4.72007 | TGTCATCAAAATAAA TGGTCCAA TCC CTGGAGCA AGTTCATTGGCACGA TERM 1192 2466967 - 2466977 + r 100 -8.2 -5.40072 | opp_overlap 2466965 2466966, overlap 2466965 GGAAGATATCAAAGC GGCG TTC CGCC TTTTTTTCCACCAGC HQ3142A 2467469 - 2466960 - | hypothetical protein trkA 2468258 - 2467575 - | TrkA domain-containing protein HQ3144A 2469001 - 2469318 + | hypothetical protein tdk 2469973 - 2469332 - | thymidylate kinase TERM 1193 2470606 - 2470618 + G 71 -9.1 -3.45324 | overlap 2470604 GAATTCACAATCTTT CGACC TTC GGTCG TGTTTGGTGACGGTG nolA 2470165 - 2471088 + | NADH dehydrogenase 32K chain TERM 1194 2472080 - 2472098 + G 71 -6.6 -4.18494 | ATTAATGAGGCTATC GCAACCCG CTT TGGGGTGC TTTTCGGTGCCGGTG ftsZ 2471510 - 2472688 + | cell division protein ftsZ HQ3148A 2472700 - 2473497 + | hypothetical protein HQ3149A 2473598 - 2474548 + | hypothetical protein engB 2474833 - 2475453 + | GTP-binding protein HQ3151A 2476051 - 2475446 - | hypothetical protein HQ3152A 2476637 - 2476302 - | homolog to thiosulfate sulfurtransferase cofE 2477056 - 2477796 + | F420-0--gamma-glutamyl ligase TERM 1195 2478056 - 2478042 - g 71 -6.4 -4.21194 | CGTTAGCATCGAAAA CAGCAA CAG TCGCTG AACTAACCAATGGGC mer 2477789 - 2478793 + | methylenetetrahydromethanopterin reductase HQ3155A 2479138 - 2478863 - | hypothetical protein HQ3156A 2479315 - 2479707 + | hypothetical protein mutL 2481613 - 2479832 - | DNA mismatch repair protein MutL mutS2 2484404 - 2481606 - | DNA mismatch repair protein TERM 1196 2485304 - 2485289 - g 70 -7.6 -3.91506 | overlap 2485287 GCACCGCCAAAAACA CAAGCA GCCC TGCTTG AAGTGATGGCTGAAC moxR 2484842 - 2485855 + | MoxR-like ATPase HQ3160A 2486157 - 2487293 + | hypothetical protein TERM 1197 2488645 - 2488658 + G 75 -8.1 -4.15044 | opp_overlap 2488641 2488645 2488654 TTTGTTTGAAATGGA CGCAG GATA CTGCG TTTATTACGCAAGCA HQ3161A 2487290 - 2489692 + | hypothetical protein tif1 2489943 - 2490239 + | translation initiation factor Sui1 nudF 2491085 - 2490522 - | ADP-ribose pyrophosphatase; Mut/nudix family protein HQ3164A 2491856 - 2491365 - | hypothetical protein HQ3165A 2492447 - 2491965 - | hypothetical protein TERM 1198 2492954 - 2492966 + r 76 -9.1 -3.6682 | TTCACGGAGTACTAC CGACC CGT GGTCG TTTACCTGCGTGACA trpG 2493856 - 2493098 - | anthranilate synthase, component II trpE 2495613 - 2493853 - | anthranilate synthase, component I TERM 1199 2494479 - 2494515 + g 71 -6.5 -4.2349 | GCCTGACATCGTTTC GAGCGAGATCAACCAAC ATC GTATGTTCAGCTCGCTC TTTTCCATCTGCAAG TERM 1200 2495409 - 2495420 + g 75 -3.6 -5.02476 | opp_overlap 2495395, overlap 2495399 ACGCTCCATCAGGAT CGCT TGAC GGCG TTTTTTCAGCACTCT trpF 2496356 - 2495610 - | phosphoribosylanthranilate isomerase trpD 2497378 - 2496353 - | anthranilate phosphoribosyltransferase TERM 1201 2496820 - 2496830 + g 73 -8.2 -3.91897 | overlap 2496816 TTACCTGTGCATCTG CCCC AGC GGGG TTTGTAAGTGGACCA arsC 2498225 - 2497791 - | arsenate reductase (glutaredoxin); protein-tyrosine-phosphatase fer1 2498606 - 2499484 + | DnaJ N-terminal domain-containing protein cbs 2499627 - 2500775 + | CBS domain-containing protein radB 2501815 - 2501042 - | DNA repair and recombination protein RadB TERM 1202 2501923 - 2501903 - H 70 -4.7 -4.4078 | opp_overlap 2501893, overlap 2501904 GTGTCTCAAGGAAAA TCCTATGAT TTA ATCACAGGG ATAATTCGCATTGTA TERM 1203 2502423 - 2502397 - H 71 -7.9 -3.84246 | CTGTGAACTACTAAA CGGCGGGGC TCTCTCCTC GCACCGCCG TAATACTCGTGATCG TERM 1204 2502576 - 2502591 + G 83 -9 -4.34267 | TGTAATATGTGATTG TCGTCG CCAC CGACGA TTTTGAGTTATATCA HQ3174A 2502569 - 2503333 + | hypothetical protein HQ3176A 2505341 - 2503791 - | hypothetical protein TERM 1205 2504543 - 2504561 + g 73 -9.6 -3.39668 | opp_overlap 2504546, overlap 2504546 TAACTGGACCACCAC GAAGCGAC CAT GTTGCTTC TTCTGCAATTTCGAC TERM 1206 2505105 - 2505126 + g 71 -7.3 -4.12296 | CATCTCTTGATGAGC GCCATCAAC TTCA GTTGATTGC TTATTTGATTGTGCA TERM 1207 2506354 - 2506365 + G 72 -5.8 -4.46615 | AATTGGGAATTGAGC CACC ACAG GGTG TTTTACTTCATGGTC aaa 2505690 - 2507918 + | AAA-type ATPase (transitional ATPase homolog) HQ3178A 2508758 - 2508279 - | PUA domain-containing RNA-binding protein HQ3179A 2508805 - 2509236 + | hypothetical protein vacB 2509446 - 2510774 + | ribonuclease R-like protein TERM 1208 2510798 - 2510777 - T 73 -4.5 -4.84642 | TCCAAATGAATAAAA TCAGAGAAA TTTA TTTTTCTGA CAGTTAGTCCTCGTC HQ3181A 2511144 - 2510911 - | hypothetical protein livJ 2511327 - 2512646 + | ABC-type branched-chain amino acid transport systems, substrate-binding protein livH 2512651 - 2513535 + | ABC-type branched-chain amino acid transport system, permease protein I TERM 1209 2514048 - 2514060 + G 89 -3.3 -5.57396 | opp_overlap 2514048 ATCTTACTTCAAACA CCGTC CGG GACTG TTTTTTATTACTTCT livM 2513535 - 2514599 + | ABC-type branched-chain amino acid transport system, permease protein II livG 2514592 - 2515386 + | ABC-type branched-chain amino acid transport systems, ATP-binding protein I livF 2515389 - 2516150 + | ABC-type branched-chain amino acid transport systems, ATP_binding protein II fdh 2516602 - 2517765 + | formaldehyde dehydrogenase HQ3188A 2518003 - 2518161 + | hypothetical protein cobW 2519623 - 2518298 - | cobalamin synthesis protein/P47K rpoM2 2519825 - 2520145 + | DNA-directed RNA polymerase subunit M2 ghmP 2521310 - 2520309 - | GHMP family kinase HQ3192A 2521903 - 2521574 - | hypothetical protein HQ3193A 2522315 - 2521974 - | hypothetical protein guaAb 2523630 - 2522713 - | GMP synthase subunit B pyrG 2525297 - 2523630 - | CTP synthetase HQ3196A 2525462 - 2525731 + | hypothetical protein pepC 2528438 - 2525745 - | phosphoenolpyruvate carboxylase petA 2528585 - 2529430 + | menaquinol--cytochrome-c reductase moaD 2529913 - 2529557 - | molybdopterin converting factor, small subunit HQ3200A 2531688 - 2530042 - | hypothetical protein TERM 1210 2530674 - 2530652 - G 74 -9.8 -3.5525 | opp_overlap 2530651 2530652 ACATATTGGTTTAAA CAGTCGACTG TCT CAGCCGCCTG CTTTGTTTCAAATAC udp 2532483 - 2531746 - | uridine phosphorylase gfoR 2533498 - 2534763 + | glucose--fructose oxidoreductase TERM 1211 2536130 - 2536117 - g 70 -8.1 -3.85092 | AGGACGCATATGAAA CCCTG ATAA CAGGG CAGTTTGAGCGAGAG aslA 2534925 - 2536316 + | arylsulfatase HQ3204A 2537133 - 2536324 - | hypothetical protein deoC 2537409 - 2538068 + | deoxyribose-phosphate aldolase HQ3206A 2539129 - 2538188 - | cation transporter ( substrates zinc/cadmium) hit 2540333 - 2539662 - | histidine triad (HIT) hydrolase ( bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)) map 2541227 - 2540337 - | methionine aminopeptidase pphA 2541360 - 2542049 + | serine/threonine protein phosphatase TERM 1212 2542542 - 2542531 - g 70 -2.2 -4.89966 | ACAGTCAAAAACAAA TGCA CGAA CGCA ATCAAATCGGGCACC HQ3210A 2542160 - 2542684 + | hypothetical protein dsbA 2543658 - 2543020 - | thioredoxin; DsbA oxidoreductase icd 2543877 - 2545142 + | isocitrate dehydrogenase (NADP+) HQ3213A 2545226 - 2546584 + | hypothetical protein HQ3214A 2546827 - 2547354 + | hypothetical protein hmgR 2548687 - 2547467 - | hydroxymethylglutaryl-CoA reductase (NADPH) TERM 1213 2548674 - 2548694 + g 81 -6.1 -4.86033 | GAATTGGCGAGTGTC GTTGGGTCT GGC ATACCCGAC TTTTTGTACCCGTTT nadA 2549046 - 2550197 + | quinolinate synthetase nadB 2550211 - 2551752 + | L-aspartate oxidase, quinolinate synthetase subunit B pyrF 2552718 - 2553545 + | orotidine-5'-phosphate decarboxylase TERM 1214 2553670 - 2553657 - T 73 -2.4 -5.27206 | GATAGATAATAAAAA CTCT ATCGTG AGAG TATGCAAGTCACACT HQ3220A 2553918 - 2553709 - | hypothetical protein grx 2554088 - 2554333 + | glutaredoxin TERM 1215 2555010 - 2554990 - f 75 -3.1 -5.23765 | opp_overlap 2554998, overlap 2554982 2554993 CAAATAACACAAAAA GGACTGGTC ATC GTCCAGCGC CGTGTTGTGTGCGCC TERM 1216 2556678 - 2556667 - g 71 -4.4 -4.67635 | CCGAAAAGGAGAAAA TCCA GCGG TGGA GCCCGATCCGAAACT TERM 1217 2556824 - 2556838 + G 83 -11.4 -3.53012 | TTCCTTCCCTTCGAA CCCGGA GGA TCCGGG TTTCCGCGAAGCGCA HQ3223A 2555160 - 2557388 + | hypothetical protein TERM 1218 2557627 - 2557638 + G 75 -5.8 -4.57353 | ACGACGGCTGATGCT TCCG ATTA CGGA TTTTCTGTCATGCAC TERM 1219 2557723 - 2557745 + G 78 -12.1 -2.71364 | opp_overlap 2557714 AACGTACGTGACAGG TCTTGCTGC TGGCC GCAGCAAGA TCGTTACCGGGATCG HQ3224A 2557622 - 2557975 + | hypothetical protein HQ3225A 2558651 - 2559145 + | hypothetical protein HQ3226A 2560672 - 2559221 - | hypothetical protein TERM 1220 2559895 - 2559913 + g 74 -3.8 -4.92385 | opp_overlap 2559899 GTGCGCCATCACGAC CAAGCCGT TCG ACGATTTG TTTTGTTTCAATATC HQ3227A 2562182 - 2560770 - | transporter apt 2562981 - 2562262 - | adenine phosphoribosyltransferase pyrE 2563657 - 2563109 - | orotate phosphoribosyltransferase cdsA 2564466 - 2563921 - | hypothetical protein HQ3231A 2565130 - 2565750 + | hypothetical protein TERM 1221 2565909 - 2565890 - f 79 -10.6 -3.5361 | opp_overlap 2565879 2565893, overlap 2565881 2565891 TAATCAGCGAGAGAA TCCCGCCG TTTA CGGCGGGC GTGAATCGCGTCACT TERM 1222 2565908 - 2565891 - f 83 -14.1 -2.71684 | opp_overlap 2565879 2565893, overlap 2565881 2565890 AATCAGCGAGAGAAT CCCGCCG TTTA CGGCGGG CGTGAATCGCGTCAC HQ3232A 2566013 - 2566150 + | hypothetical protein TERM 1223 2566196 - 2566148 - g 76 -9.5 -3.68073 | opp_overlap 2566166 GACGCTACTGAAGAA TGAGTGAGGAGTGCAAGACGCTC GAA GCGTATCTTGCCCCACCCACTCA GCACAAACAGCGCAA HQ3233A 2566147 - 2567466 + | IS1341-type transposase TERM 1224 2567476 - 2567490 + T 70 -10 -3.0263 | overlap 2567485 2567486 TCTTGAAACCTCAAT CCAGCA CCT TGCTGG TATTCCACCCGTGGT ilvE 2568541 - 2567612 - | branched-chain amino acid aminotransferase ribB 2570147 - 2569416 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1225 2570048 - 2570068 + g 85 -11.9 -3.68619 | opp_overlap 2570046 2570047 CGCCATCACGAAATG CTGTTACCG CAG CGGTGACAG TTTCGCTCGATTCAA HQ3236A 2570941 - 2570237 - | riboflavin biosynthetic operon protein; transtriptional regulator TERM 1226 2571280 - 2571302 + r 81 -12.6 -3.27298 | opp_overlap 2571271 2571281, overlap 2571281 TACAGAGGTGAACTC ACCCCGGGGT CAA GCCCCGGGGC TTCCTGCTTCAACGA TERM 1227 2571281 - 2571301 + r 90 -16.1 -2.56164 | opp_overlap 2571271 2571281, overlap 2571280 ACAGAGGTGAACTCA CCCCGGGGT CAA GCCCCGGGG CTTCCTGCTTCAACG TERM 1228 2571301 - 2571281 - R 90 -15.4 -2.54702 | opp_overlap 2571281 2571280, overlap 2571271 ACAGAGGTGAACTCA CCCCGGGG TCAAG CCCCGGGG CTTCCTGCTTCAACG HQ3237A 2572527 - 2571289 - | IS1341-type transposase HQ3238A 2572661 - 2572533 - | hypothetical protein TERM 1229 2573648 - 2573672 + G 85 -10.7 -3.92324 | overlap 2573649 ACCTGAGGATGTCCC AGCGACGCTTG CCT CAAGCGTTGCA TTTCGTCTTGCAAGA TERM 1230 2573649 - 2573671 + G 90 -14.2 -2.95073 | overlap 2573648 CCTGAGGATGTCCCA GCGACGCTTG CCT CAAGCGTTGC ATTTCGTCTTGCAAG argS 2573538 - 2575328 + | arginine--tRNA ligase TERM 1231 2575560 - 2575528 - f 76 -7.7 -4.36592 | CGCCAACAAAAAAGA TAGTCGCTGCACCCG CAC CGAGCGCAATAACTA AGAACATGAGCAGCC erf1 2575743 - 2576993 + | peptide chain release factor 1 TERM 1232 2577076 - 2577024 - T 86 -14.7 -2.72049 | opp_overlap 2577044 TACACGGGTCAACGA CCTCACCCTCACTTCGCTCACCGCG TCA CGCGGTTCCCTCGGTGAGGGTGAGG CTTGCCAGTGACCTC TERM 1233 2577044 - 2577056 + T 73 -10.5 -3.07816 | opp_overlap 2577024 CCCTCACTTCGCTCA CCGCG TCA CGCGG TTCCCTCGGTGAGGG atpD 2578326 - 2577628 - | V-type ATP synthase subunit D atpB 2580014 - 2578587 - | V-type ATP synthase subunit B atpA 2581773 - 2580016 - | V-type ATP synthase subunit A atpF 2582126 - 2581797 - | V-type ATP synthase subunit F TERM 1234 2581889 - 2581909 + g 83 -11.9 -3.6106 | opp_overlap 2581885 2581892, overlap 2581892 2581906 CACCACCAAGAGTCA CAAGCGTCG GTT CGATGCTTG TTTCGACATCTTCGC TERM 1235 2581892 - 2581906 + g 70 -7.8 -3.93658 | opp_overlap 2581892 2581885, overlap 2581889 CACCAAGAGTCACAA GCGTCG GTT CGATGC TTGTTTCGACATCTT atpC 2583172 - 2582129 - | V-type ATP synthase subunit C atpE 2583750 - 2583169 - | V-type ATP synthase subunit E atpK 2584008 - 2583772 - | H(+)-transporting two-sector ATPase, subunit K (A-type ATP synthase) TERM 1236 2583897 - 2583850 - G 82 -10.6 -3.86194 | gap 1, opp_overlap 2583843 AAGTCCGTTGACAAA GAGACTGTCATCCTCTGCGATAG CGC CCATCGCAGCGG-CGCCAATCCC ACGCTCTGCATAACC atpI 2586553 - 2584217 - | H(+)-transporting two-sector ATPase, subunit I (A-type ATP synthase) TERM 1237 2586480 - 2586526 + g 74 -11 -2.8511 | opp_overlap 2586490, overlap 2586477 2586521 TTAAGATCGTGTGTC GTTTCAACGACTGTCTCCAG TACCTGC TTGGAGCCAGTCATTGAGAC TCTACTCATCTGCTC atpH 2586872 - 2586540 - | H(+)-transporting two-sector ATPase, subunit H (A-type ATP synthase) menG 2587083 - 2587772 + | menaquinone biosynthesis methyltransferase-like protein HQ3252A 2588415 - 2587858 - | hypothetical protein HQ3253A 2589919 - 2588594 - | hypothetical protein HQ3254A 2590046 - 2591638 + | hypothetical protein idsA 2591750 - 2592565 + | multifunctional long-chain (E)-prenyl diphosphate synthase HQ3256A 2593763 - 2592624 - | hypothetical protein HQ3257A 2594029 - 2595024 + | hypothetical protein HQ3258A 2595844 - 2595089 - | hypothetical protein TERM 1238 2596260 - 2596250 - g 78 -5.4 -4.99568 | overlap 2596251 CAACAGCAAAGAAAA TCGT TGA ACGA CTCCCAGTCGACGAC HQ3259A 2595934 - 2596416 + | hypothetical protein tfx 2596590 - 2597198 + | putative transcriptional regulator manC 2598403 - 2597255 - | mannose-1-phosphate guanylyltransferase TERM 1239 2597494 - 2597505 + g 73 -7.2 -4.23529 | CAGAGTGTTCGTCTT CCGC TGAT GCGG TTTGTGTATTGATAT HQ3262A 2598836 - 2598414 - | hypothetical protein HQ3263A 2599263 - 2600195 + | replication factor A TERM 1240 2600418 - 2600433 + G 81 -3.2 -5.43414 | GCGTGGTCGAATTGT TGATCC GACA GGAACA TTTTTTGTGTATGCT HQ3264A 2600197 - 2600820 + | hypothetical protein HQ3265A 2601133 - 2601567 + | hypothetical protein HQ3266A 2602369 - 2601914 - | helicase TERM 1241 2602467 - 2602455 - H 72 -4.8 -4.59773 | opp_overlap 2602455 2602453 CTGCACGGGTAAAAA GAGC TGGGG GCTC TATTGTGTATGTAAC TERM 1242 2603580 - 2603561 - g 71 -5 -4.56775 | ACCGCCCTCGAAAAA TGGCTG GAGGAACG CAGCCA ACATGAAAAATACGA HQ3267A 2602766 - 2603875 + | putative phage integrase TERM 1243 2604106 - 2604090 - T 71 -7.3 -4.04927 | overlap 2604091 GGAAGGATCAAACAA CTGGAGT AGA ACTCCAA CCCAGGCTCAAGGCT cdc6_ 2604851 - 2604114 - | cell division control protein cdc6-like protein TERM 1244 2605258 - 2605230 - g 82 -11.7 -3.36073 | overlap 2605228 TACACCTTCCAAACA TCCTCCTCCACGG ACC CCGCGGAACAGGA AAAACACTGCTCACA cdc6_ 2605109 - 2606137 + | cell division control protein cdc6-like protein HQ3270A 2606536 - 2606123 - | calcium binding int 2608253 - 2607018 - | phage integrase TERM 1245 2608483 - 2608501 + r 84 -10.2 -3.95986 | opp_overlap 2608486 CTTATATTTCTGAAG CCAGGGAG ACT CCCCCTGG TTTGATTCGCTTGGG HQ3272A 2610535 - 2608586 - | hypothetical protein TERM 1246 2610775 - 2610764 - g 81 -3.6 -5.4593 | TCAAAAGAACAAAAA GGCA GTAC CGCC GTGGCAACAGGGAAA HQ3273A 2610658 - 2611371 + | hypothetical protein HQ3274A 2616792 - 2611501 - | helicase TERM 1247 2612592 - 2612605 + g 73 -5.3 -4.63932 | GCTTCCGCTCCTCAT CATCA CTTG TGATG TTTTCTTCCGACATA HQ3275A 2620900 - 2616845 - | type II restriction/modification enzyme TERM 1248 2617479 - 2617448 - G 70 -2.4 -4.87133 | gap 1, opp_overlap 2617448 2617458 ATTTCGGAAAGAAAA TATCCACTCTCTATC CCA GTTA-AGATTGGATA GTTGCTCTTGAAAAT TERM 1249 2618318 - 2618334 + g 90 -2.9 -5.72254 | opp_overlap 2618312, overlap 2618312 TCTGATGAACTTAGA GGCACTC TCA GAGTTTC TTTTTTCTTGTTTCC hepA 2623776 - 2620897 - | ATP-dependent helicase HepA HQ3277A 2625362 - 2623995 - | adenine-specific DNA methyltransferase HQ3278A 2626273 - 2625428 - | hypothetical protein TERM 1250 2625761 - 2625747 - G 71 -2.7 -4.89477 | opp_overlap 2625733, overlap 2625748 TCCGGAATAACAAAA TCCGG TTCCT CCGGT AAGCTATTACCCTTG HQ3279A 2626653 - 2626426 - | hypothetical protein HQ3280A 2629604 - 2626854 - | hypothetical protein TERM 1251 2627855 - 2627839 - G 75 -3.7 -5.17054 | ATAATATCCAAAAAA TTCGACA TAT CATCGAA TGGAACAGTACTCGA HQ3281A 2631957 - 2630461 - | hypothetical protein HQ3282A 2633450 - 2632395 - | hypothetical protein HQ3283A 2633527 - 2634612 + | hypothetical protein htpX 2635743 - 2634886 - | protease HtpX HQ3285A 2636970 - 2636491 - | hypothetical protein HQ3286A 2637578 - 2637051 - | hypothetical protein HQ3287A 2637849 - 2638088 + | hypothetical protein HQ3288A 2638145 - 2639218 + | hypothetical protein TERM 1252 2639541 - 2639525 - g 74 -9.4 -3.68366 | overlap 2639521 CCACGTCAAAACCAA CGACGG ATCCG CCGTCG CAGTCATCAAAGTCG TERM 1253 2640066 - 2640029 - g 79 -10.7 -3.59946 | gap 1, overlap 2640035 CTCCCAACCACACAA CGGAAACGGCGAATA-CT CAC AGACACTCGCCATCTCCG AACTCCCCACAGACC trsE 2639211 - 2641349 + | transfer complex protein HQ3290A 2641346 - 2642299 + | hypothetical protein TERM 1254 2642521 - 2642505 - g 71 -2.9 -4.84761 | AGACGCCCACAAAAA CCACGGA ATC TGCATGG TCATACCCAAAGGAG TERM 1255 2643643 - 2643624 - g 71 -9.2 -3.57462 | CACCTCACTCGGAAA CACCGCCA ACGC CGGCGGCG AAAAACACGCAACAC HQ3291A 2642296 - 2644203 + | conjugation protein HQ3292A 2644502 - 2645341 + | hypothetical protein TERM 1256 2645378 - 2645366 - g 71 -4.1 -4.82154 | AACCCAGATCAAAAA CTTCG AGA CAAAG ACCAGACAGTACTCC HQ3293A 2645342 - 2645749 + | hypothetical protein HQ3294A 2646494 - 2645754 - | hypothetical protein HQ3295A 2648488 - 2647199 - | hypothetical protein TERM 1257 2648547 - 2648525 - H 84 -4.9 -5.29716 | GTAACATAATAAAAA TACTGTAGA GATTG TCTACGGTA CATACTGTAATACTG HQ3297A 2650476 - 2651789 + | AAA-type ATPase (cell division control protein homolog) HQ3298A 2651786 - 2653096 + | hypothetical protein livF 2656117 - 2655401 - | ABC-type branched-chain amino acid transport systems, ATP-binding protein II livG 2656890 - 2656114 - | ABC-type branched-chain amino acid transport systems, AT-binding protein I livH 2657747 - 2656887 - | ABC-type branched-chain amino acid transport system, permease protein I TERM 1258 2657113 - 2657100 - G 76 -2.3 -5.23396 | opp_overlap 2657101, overlap 2657101 AATAAGGAATAAAAA GCCCA TCGT TGGGT TGATATTTGAATCAA TERM 1259 2657684 - 2657663 - G 75 -5.1 -4.70626 | overlap 2657666 TAAGAAGTCCAAAAA GAAGCGTTA ATCC CAACGCTGC GAGGGCAATGAGACT livM 2658708 - 2657749 - | ABC-type branched-chain amino acid transport system, permease protein II livJ 2660167 - 2658821 - | ABC-type branched-chain amino acid transport systems, substrate-binding protein TERM 1260 2661300 - 2661285 - R 80 -5.4 -5.07652 | overlap 2661286 TTCCCGAAAAGAAAA TCGCCA AATC TGACGA TTCAGGCGGCCAAGA HQ3306A 2662265 - 2661852 - | hypothetical protein phoU 2663595 - 2662918 - | ABC transport system regulatory protein phoU 2663962 - 2664963 + | ABC transport system regulatory protein TERM 1261 2665036 - 2664989 - T 93 -12 -3.66178 | gap 1, overlap 2664991 GCCCTGAAGCGCAAA GATTCCTTCGTGG-GGCATCGGA CCG TCCAACGCCACCCCGAAGGTAAC GTCCTCATACACGAC TERM 1262 2665034 - 2664991 - T 86 -13.2 -3.41222 | gap 1, overlap 2664989 CCTGAAGCGCAAAGA TTCCTTCGTGG-GGCATCGGA CCG TCCAACGCCACCCCGAAGGTA ACGTCCTCATACACG rps8R 2665674 - 2665297 - | 30S ribosomal protein S8e HQ3310A 2665788 - 2666249 + | hypothetical protein TERM 1263 2666339 - 2666370 + T 100 -12.4 -4.38171 | opp_overlap 2666346 2666349, overlap 2666340 GTTGAATCATACTAC TCATGAACTACCAC GGGC GTGGTGGTTCGTGG TTTTGCTGTGGTCTC TERM 1264 2666340 - 2666369 + T 86 -13.7 -3.2218 | opp_overlap 2666346 2666349, overlap 2666339 TTGAATCATACTACT CATGAACTACCAC GGGC GTGGTGGTTCGTG GTTTTGCTGTGGTCT TERM 1265 2666683 - 2666731 + T 86 -9.4 -4.41494 | gap 2, opp_overlap 2666670, overlap 2666685 CAGGCGCGTAGCCGA GC-GCACGCGCTCCAC-CCCCGCC CGC GGTGGGGCGAGGAACTCGCGCTGC TTTTGATTCACAGTG TERM 1266 2666685 - 2666728 + T 74 -10.8 -3.18268 | gap 1, opp_overlap 2666670, overlap 2666683 GGCGCGTAGCCGAGC GCACGCGCTCCAC-CCCCGCC CGC GGTGGGGCGAGGAACTCGCGC TGCTTTTGATTCACA carB 2670019 - 2666753 - | carbamoyl phosphate synthase large subunit HQ3312A 2670680 - 2670150 - | hypothetical protein TERM 1267 2670774 - 2670752 - R 95 -13.4 -3.66658 | overlap 2670750 AAGATTGCGAAAAGA CCAGCCCCTC ATG GAGCGGCTGG AGAGACCGAGTAACA HQ3313A 2671126 - 2670875 - | hypothetical protein TERM 1268 2670947 - 2670937 - G 71 -4 -4.71776 | CAATACCCAAGAAAA GATA ATG TATC GGGACAAGTGCCTGT HQ3314A 2671510 - 2671184 - | hypothetical protein fxsA 2672399 - 2671920 - | FxsA HQ3316A 2672528 - 2674246 + | hypothetical protein HQ3317A 2675641 - 2674712 - | GTP cyclohydrolase TERM 1269 2674779 - 2674796 + g 73 -7.1 -4.17274 | GCATGTGCATTGTGC TGATGAA TTGA TTCATCA TTTGATTGTTTCATT HQ3318A 2676327 - 2675836 - | hypothetical protein TERM 1270 2676276 - 2676289 + g 100 -6.7 -5.79526 | TTCGGACACGCGAGT GAGCA GTTT TGCTC TTTTTTTTCGAATGT hcaD 2677920 - 2676676 - | ferredoxin:NAD+ oxidoreductase HQ3320A 2678204 - 2678812 + | hypothetical protein TERM 1271 2678883 - 2678893 + T 74 -6.8 -4.19678 | opp_overlap 2678882 ATAATGTTAGAGTAG GCAG TAT CTGC TTTATTAACCTGTGA hemY 2680485 - 2679052 - | hypothetical protein TERM 1272 2681029 - 2681052 + G 88 -13.2 -3.24425 | overlap 2681022 GATCATCAGCCGCCA GTGCAGCAGC CGCG GCTGTTGCAC TTAATGGCTTATATG thrB 2680752 - 2681633 + | homoserine kinase pyroA 2682894 - 2681986 - | pyridoxine biosynthesis protein HQ3324A 2683074 - 2683910 + | hypothetical protein HQ3325A 2685064 - 2684111 - | hypothetical protein TERM 1273 2684894 - 2684911 + g 74 -2.7 -5.01732 | AGCTCCTAGTAAATT CTTGAAA TCCT TCTCAAG TTTTTTAGAGAGATT panF 2686819 - 2685305 - | sodium/pantothenate symporter HQ3327A 2687063 - 2686812 - | hypothetical protein dnaG 2687332 - 2689053 + | DNA primase HQ3329A 2690025 - 2689456 - | hypothetical protein HQ3330A 2691347 - 2690022 - | hypothetical protein TERM 1274 2690812 - 2690786 - G 71 -4.4 -4.79955 | overlap 2690787 AGAGCCATAATAAAA GTCCACTCGCAA GCA TTACAAGCGGAT CATCACGTTCAAAAA TERM 1275 2691360 - 2691370 + H 76 -8.2 -4.10161 | CATATACTTAATGGT CCCG ACA CGGG TTTTCGCACGTCATG uppS 2691487 - 2692095 + | di-trans,poly-cis-decaprenylcistransferase uppS 2693082 - 2692129 - | di-trans,poly-cis-decaprenylcistransferase HQ3333A 2693294 - 2693692 + | hypothetical protein nirH 2693829 - 2694950 + | heme biosynthesis protein nirH/G (nirL/nirD homolog) cysG 2695051 - 2695722 + | siroheme synthase hemA 2695719 - 2697083 + | glutamyl-tRNA reductase TERM 1276 2697174 - 2697196 + T 100 -17 -3.6579 | TCGTTCGGGTGAACT GCTCCGGGGT CAA GCCCCGGAGC TTCTTCCCGTGGATT TERM 1277 2698007 - 2698025 + T 71 -10.2 -2.71731 | overlap 2697995 2697992 TGACGTGCAATTCTT CACGTCCG TTT CGGACGAG TGCTTCGGCAGTGCC HQ3339A 2698635 - 2698501 - | hypothetical protein HQ3340A 2698694 - 2698843 + | IS200-type transposase (nonfunctional,N-terminal part) phhB 2699409 - 2699684 + | pterin-4-alpha-carbinolamine dehydratase pgp 2699727 - 2700464 + | phosphatase moeA 2702458 - 2700569 - | molybdenum cofactor biosynthesis protein MoeA moeA 2703804 - 2702455 - | molybdenum cofactor biosynthesis protein MoeA hsp20 2703998 - 2704384 + | hsp20 type chaperone ubiB 2704408 - 2706075 + | ubiquinone biosynthesis transmembrane protein tif5A 2706236 - 2706610 + | translation initiation factor IF-5A speB 2706625 - 2707452 + | agmatinase surE 2708641 - 2707844 - | acid phosphatase HQ3351A 2710488 - 2708857 - | tyrA operon protein tyrA 2711255 - 2710485 - | prephenate dehydrogenase pepQ 2712695 - 2711454 - | Xaa-Pro aminopeptidase TERM 1278 2711874 - 2711887 + g 80 -6.7 -4.73614 | TGTTCGGGTCATATC CGCAT GATA ATGCG TTTGTTTTGATCGTG lrp 2713492 - 2713064 - | transcription regulator porB 2714512 - 2713574 - | pyruvate--ferredoxin oxidoreductase, beta subunit porA 2716413 - 2714515 - | pyruvate--ferredoxin oxidoreductase, alpha subunit TERM 1279 2716760 - 2716784 + r 93 -13.6 -3.59315 | opp_overlap 2716753 2716751 2716754, overlap 2716762 GATTAACAGGCAGAG TGCCTCGGGG CTTGA CCCCGAGGTA TTTCACAGTAATTAC TERM 1280 2716762 - 2716782 + r 90 -14 -3.37259 | opp_overlap 2716753 2716751 2716754, overlap 2716760 TTAACAGGCAGAGTG CCTCGGGG CTTGA CCCCGAGG TATTTCACAGTAATT aroC 2718068 - 2716917 - | chorismate synthase aroA 2719628 - 2718330 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1281 2720395 - 2720443 + H 70 -8.8 -3.30771 | overlap 2720398 2720398 2720400 TGAGGCGGGTGCGGG TGCGGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCCTA TTCTCGACCATGTAC TERM 1282 2720398 - 2720441 + H 74 -10.3 -3.22102 | gap 1, overlap 2720395 2720398 2720400 GGCGGGTGCGGGTGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTCTCGACCATGT TERM 1283 2720398 - 2720440 + H 78 -12.7 -2.5294 | overlap 2720398 2720395 2720400 GGCGGGTGCGGGTGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTCTCGACCATG TERM 1284 2720400 - 2720438 + H 77 -11.7 -2.80074 | overlap 2720398 2720398 2720395 CGGGTGCGGGTGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTCTCGACCA TERM 1285 2720774 - 2720793 + H 75 -11.4 -3.04792 | CGTGACGGCGCGTAT CCACGGCC TGAA GGTCGTGG TATTGCGCCTGCTCA polIVy 2720967 - 2722304 + | DNA polymerase IV tpiA 2723105 - 2722461 - | triosephosphate isomerase HQ3361A 2723782 - 2723249 - | transcriptional regulator TERM 1286 2723543 - 2723562 + g 88 -11.4 -3.86015 | gap 1, opp_overlap 2723541 ATTGTCGAACATATC GCGGCGTGG AGA CC-CGCCGC TTTGTGAGGCCGATG pgsA 2724456 - 2723842 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase HQ3363A 2725023 - 2724511 - | nucleotide kinase hisC 2726150 - 2725020 - | histidinol-phosphate aminotransferase HQ3365A 2728369 - 2726735 - | oxidoreductase-like protein HQ3366A 2728979 - 2728362 - | hypothetical protein TERM 1287 2729355 - 2729337 - R 77 -11.7 -2.91144 | overlap 2729334 GGATGCTGTAAAGTA CTCGGGG ACAAG CCCCGAG GCACTCCCCCTGCTC hcpE 2730200 - 2729469 - | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase HQ3368A 2730408 - 2731121 + | hypothetical protein TERM 1288 2731453 - 2731501 + T 79 -8.8 -4.10657 | overlap 2731456 2731456 2731458 TGAGGCGGGTGCGGA TGCGGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCCTA TTTTCGACCATGTAC TERM 1289 2731456 - 2731498 + T 79 -12.7 -2.78508 | overlap 2731453 2731456 2731458 GGCGGGTGCGGATGC GGGTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTC CTATTTTCGACCATG TERM 1290 2731456 - 2731499 + T 79 -10.3 -3.64984 | gap 1, overlap 2731456 2731453 2731458 GGCGGGTGCGGATGC GG-GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTACTCC TATTTTCGACCATGT TERM 1291 2731458 - 2731496 + T 77 -11.7 -2.93623 | overlap 2731456 2731456 2731453 CGGGTGCGGATGCGG GTGGGACTGCTGGCGGT GCCAA GCCGCCGGTACTCCTAC TCCTATTTTCGACCA HQ3369A 2731985 - 2731860 - | putative transposase TERM 1292 2731992 - 2731946 - G 90 -14.4 -3.03159 | TCAATTTTGTGAAGA TCTCATCGAGGAGGACGCGG TATTCAG CCGCGCCCTCCACGATCAGG GGCGACGATTCCCAT HQ3370A 2733079 - 2732267 - | transposase homolog (ISHnew96) TERM 1293 2732369 - 2732412 + g 90 -13.1 -3.69283 | opp_overlap 2732372, overlap 2732372 ACCGTTGAGTGCATA GAACCCGGCCGCTGGTGTA TCAATT TTCACCAGCGGTCGGGTGA TTGTTGGCTCAGTTA TERM 1294 2732372 - 2732409 + g 100 -19.2 -2.94872 | opp_overlap 2732372, overlap 2732369 GTTGAGTGCATAGAA CCCGGCCGCTGGTGTA TCAATT TTCACCAGCGGTCGGG TGATTGTTGGCTCAG TERM 1295 2732409 - 2732372 - G 100 -17 -3.50393 | opp_overlap 2732372 2732369 GTTGAGTGCATAGAA CCCGGCCGCTGGTGTA TCAATT TTCACCAGCGGTCGGG TGATTGTTGGCTCAG TERM 1296 2732583 - 2732619 + g 93 -13.8 -3.75015 | GGTTCGTCTCCATCA TCCTCGGTGAACGCGT CGGCA ACGCGTTCGTCGAGAA TTTCGTCAGCGTTCT TERM 1297 2732978 - 2732996 + g 75 -10.3 -3.39803 | opp_overlap 2732978 CAGCCGTTTGACGAA GGTGAGC CGCTT GCTCACC TTCTCGCTGTCAGTC TERM 1298 2732996 - 2732978 - G 73 -10.3 -3.14344 | opp_overlap 2732978 CAGCCGTTTGACGAA GGTGAGC CGCTT GCTCACC TTCTCGCTGTCAGTC pho 2734277 - 2733465 - | sugar phosphatase TERM 1299 2734482 - 2734470 - H 77 -9.1 -3.88618 | overlap 2734473 AAGAGAAGGAGTAAA CGACC ACG GGTCG GGTGAGGTGACCCGT TERM 1300 2734499 - 2734473 - H 75 -10.9 -3.00353 | overlap 2734470 AGAAGGAGTAAACGA CCACGGGTC GGGTGAGGT GACCCGTGG AACTCTCGCTGTTTC HQ3372A 2734808 - 2735257 + | hypothetical protein cumB 2736383 - 2735919 - | cytosine/adenosine deaminases nuc 2737477 - 2736485 - | endonuclease staphylococcal nuclease-like TERM 1301 2736608 - 2736638 + g 71 -9 -3.56544 | opp_overlap 2736617 TGAGTTTGACCCATT TCCAGTATAGAGCG TCA TGCTCTCTCCTGGA TTAATTATTACTCCT TERM 1302 2737506 - 2737523 + r 79 -9.1 -4.14243 | overlap 2737507 GAGTATCGGTATCTT TCTGCCC TGAA GGGCAGG TTTTAGGATCAAATC TERM 1303 2737507 - 2737522 + r 73 -10.4 -3.08224 | overlap 2737506 AGTATCGGTATCTTT CTGCCC TGAA GGGCAG GTTTTAGGATCAAAT HQ3376A 2737951 - 2737628 - | hypothetical protein HQ3377A 2738131 - 2738322 + | hypothetical protein HQ3378C 2738837 - 2738784 - | IS1341-type transposase (nonfunctional, central part) HQ3379B 2739640 - 2739714 + | IS200-type transposase (nonfunctional,C-terminal part) TERM 1304 2739707 - 2739756 + T 85 -5.5 -5.37593 | gap 1, opp_overlap 2739702, overlap 2739715 2739738 AGATAGAACACGTGC CAGAGTGACGCGCTTCACCCCGCC CAC GGTGGGGCGGGGAAC-TCGCGCTG TTTTTTCATTTAGAA potC 2740609 - 2739788 - | ABC-type spermidine/putrescine transport system,permease protein II potB 2741661 - 2740726 - | ABC-type spermidine/putrescine transport system,permease protein I potA 2742986 - 2741664 - | ABC-type spermidine/putrescine transport system,ATP-binding protein TERM 1305 2742217 - 2742233 + g 73 -9.5 -3.34962 | overlap 2742216 ATTCCGATCGGTGTG TCAACAG TGA CTGTTGA TTCTGCCATATCACA potD 2744050 - 2742989 - | ABC-type spermidine/putrescine transport system,substrate-binding protein rps10p 2745402 - 2745094 - | 30S ribosomal protein S10P tef1a 2746668 - 2745403 - | elongation factor 1-alpha TERM 1306 2746759 - 2746771 + r 81 -4.7 -5.252 | CACGGGTCAGCGCGC CGGCG TAT CGCGG TTTTTTATGCCACTC hom 2747970 - 2746996 - | homoserine dehydrogenase HQ3387A 2748742 - 2747972 - | allosteric regulator of homoserine dehydrogenase tef2 2751249 - 2749060 - | elongation factor EF-2 TERM 1307 2751008 - 2751022 + g 71 -8.6 -3.76968 | overlap 2751015 GTATCCTCATACGTA TGTGTC ATC GACACA TTTGCTGCGTCGATT HQ3389A 2751655 - 2752539 + | hypothetical protein rps7 2753345 - 2752662 - | 30S ribosomal protein S7P TERM 1308 2752765 - 2752784 + g 71 -7.2 -4.03234 | gap 1, opp_overlap 2752765 ACCTGTGCAAGCGAA TCAGCAGCA CTT TGC-GCTGA TTTATATGACCCACG rps12P 2753775 - 2753347 - | 30S ribosomal protein S12P nusA 2754458 - 2754036 - | transcription elongation factor NusA-like protein rpoA2 2756526 - 2754613 - | DNA-directed RNA polymerase subunit A'' (subunit C) rpoA 2759455 - 2756519 - | DNA-directed RNA polymerase subunit alpha TERM 1309 2756930 - 2756903 - G 77 -4.1 -5.10461 | overlap 2756904 TGCATGGAAGAAAAA CTCCCGTGGTG TCAATC CACCACGATAA CTGTTTTCAACAAAT rpoB1 2761409 - 2759574 - | DNA-directed RNA polymerase subunit B' rpoB2 2763218 - 2761641 - | DNA-directed RNA polymerase subunit beta'' TERM 1310 2761837 - 2761877 + g 79 -11.8 -3.17075 | opp_overlap 2761832 GATGGACAAATGCGT CCCCACTGGGTGGCATGT AGATC ACGTGCCTCAAAGTGGGG TTGACTTCGGGAAAG TERM 1311 2762994 - 2763013 + g 74 -9.2 -3.64822 | opp_overlap 2762978, overlap 2762995 TTCTTCGGACCCATC AGCCTCGC GGAC GCGAGGCG TTTCAATCCGAACAT TERM 1312 2762995 - 2763012 + g 81 -12.7 -2.78679 | opp_overlap 2762978, overlap 2762994 TCTTCGGACCCATCA GCCTCGC GGAC GCGAGGC GTTTCAATCCGAACA rpoH 2763442 - 2763215 - | DNA-directed RNA polymerase subunit H HQ3398A 2764720 - 2763671 - | RIO-like serine/threonine protein kinase II TERM 1313 2764158 - 2764171 + g 76 -2.4 -5.31275 | TCTTTTTGAGTCCAT GCAA GCACGA TTGC TTTTTTATCCTGCCC tif1A1 2765007 - 2764717 - | translation initiation factor IF-1A TERM 1314 2765288 - 2765324 + r 71 -7.2 -4.08064 | opp_overlap 2765288 TAGAAACCATTCAAA CCGCTAGAGCAGACGG CAACA CCATCTGTTCTTGCCG TTTTGCCACACAATT tyrS 2766506 - 2765505 - | tyrosyl-tRNA synthetase HQ3401A 2766673 - 2767002 + | hypothetical protein TERM 1315 2767344 - 2767358 + T 70 -10 -3.01416 | overlap 2767337 CTTCACGGGCGGTTC GGAGTG AAC CACTCC TATCTGTGGATACTC HQ3402A 2769665 - 2767683 - | hypothetical protein TERM 1316 2769205 - 2769229 + g 76 -11.5 -2.77947 | overlap 2769204 2769223 TGGCTCCAACCGCCT TTTCCGGTGGA ACG TCCACGGGAAA CTTTCACCGTTGTTG elaC 2770949 - 2769993 - | ribonuclease Z (RNase Z) (tRNA 3 endonuclease) TERM 1317 2771059 - 2771036 - H 100 -13.2 -5.47821 | ATCCACGCAAAAAAA TGCCTCAGGA CTGA CCCTGAGGCA GTTCACCAGACGATG HQ3404A 2771238 - 2771516 + | hypothetical protein rfcC 2771553 - 2772677 + | replication factor C small subunit 2 TERM 1318 2772824 - 2772834 + G 75 -5.4 -4.68593 | overlap 2772816 TACTGATTGGTGGTG CCAT TTT ATGG TTTTTCCGTGATCCA psd 2772688 - 2773323 + | phosphatidylserine decarboxylase HQ3407A 2774416 - 2773313 - | RNA methylase TERM 1319 2774488 - 2774505 + H 71 -7.1 -4.09685 | opp_overlap 2774487 CGGTCGTGACATTAT GTAACTA GAAT TAGTTAC TTTTAGCCGCTACAG TERM 1320 2775484 - 2775468 - g 82 -10.1 -3.84514 | AGTGCAATGACGAAA CCGAACG TCG CGCTCGG GCGCTTACCCAACAA TERM 1321 2775602 - 2775586 - g 72 -10.9 -2.72558 | overlap 2775588 2775590 ACAACTTTGCAATGA CAGACTG ACA CAGTCTG AGATATCCAACGCAG tfbA 2774567 - 2775694 + | transcription initiation factor TFB HQ3409A 2775691 - 2776080 + | hypothetical protein tbpE 2776154 - 2776714 + | transcription factor HQ3411A 2777028 - 2777396 + | hypothetical protein hisG 2778410 - 2777565 - | ATP phosphoribosyltransferase trzA 2778667 - 2779998 + | chlorohydrolase TERM 1322 2780308 - 2780323 + F 79 -3.2 -5.28281 | opp_overlap 2780299 ACAAAGTAGGTGACC CATCGA ACTC TCGCTG TTTTCTTTATTTTCT achY 2780406 - 2781704 + | S-adenosyl-L-homocysteine hydrolase HQ3415A 2783292 - 2781820 - | sulfatase TERM 1323 2783395 - 2783372 - R 79 -8.8 -4.08349 | opp_overlap 2783372, overlap 2783367 ACCGCAAAAATAGAA CCATCGGTCG AAAT CTACCGACGG TGATCTATCTTCATG HQ3416A 2784339 - 2783782 - | divalent cation transporter, subunit II, MgtE family protein HQ3417A 2784945 - 2784340 - | divalent cation transporter, subunit I, MgtE family protein TERM 1324 2785097 - 2785085 - R 72 -9.1 -3.64703 | GGCGGTTCACCCAAA CGGTC CGA GACCG CCGCCACCACCAAGA srp54 2786476 - 2785076 - | signal recognition particle 54K protein ftsY 2788418 - 2787177 - | signal recognition particle receptor SRalpha pfdA 2788914 - 2788450 - | prefoldin alpha subunit rplX 2789129 - 2788914 - | 50S ribosomal protein LX tif6 2791095 - 2790415 - | translation initiation factor IF-6 TERM 1325 2790750 - 2790728 - G 72 -10.6 -3.08798 | AGTGCGGATTCAATA CTCTCGACAG CTT CTGTGGAGAG ATCAGGATGGACATA rpl31R 2791375 - 2791097 - | 50S ribosomal protein L31e rpl39e 2791530 - 2791378 - | 50S ribosomal protein L39e TERM 1326 2791585 - 2791563 - H 75 -6.3 -4.4009 | opp_overlap 2791550 TCGGACTGCATAAAA TGTTGTTCC TTTGT GGTACAACA GTGCGTGATTCGTTT HQ3425A 2791778 - 2792518 + | TPR repeat-containing protein HQ3426A 2792515 - 2792979 + | hypothetical protein nifS 2793144 - 2794427 + | cysteine desulfurase, class V aminotransferase nifU 2794571 - 2794987 + | homolog to nitrogen fixation protein NifU TERM 1327 2795051 - 2795032 - T 87 -10.6 -4.12188 | TGAGCAGGCGCAAAA CCTCGCCC TTCA GGGCGGGG AAGATGTCAAATCAT radA 2796898 - 2795867 - | DNA repair and recombination protein RadA HQ3430A 2797902 - 2797297 - | hypothetical protein TERM 1328 2797839 - 2797861 + g 75 -7.7 -4.16842 | gap 1 CCTCAGGATCAGCAT CGCGGGTTGC ATCT GCAGCC-GCG TTTGTTCCGAATACA htpX 2798801 - 2797932 - | heat shock protein HtpX TERM 1329 2798065 - 2798091 + g 71 -6.7 -4.18018 | gap 2 GCATTCATCTCTGAT TGTT-CGCG-GAG ATC CTCACGCGGAACA TTTTCCATCCGACCA TERM 1330 2798684 - 2798669 - G 74 -9 -3.6217 | overlap 2798667 GTGCAAGTACAAACA CTCCCA TCAA TGGGAG GAATATAAGTGACCG TERM 1331 2799436 - 2799462 + H 70 -10.1 -3.05384 | gap 1, opp_overlap 2799435 2799434 CGGTCTAGGAGAATG CCCCGGGG-CTT TGAT ATGACCCCGGGG TTGAATCCGACAACG HQ3432A 2799525 - 2800391 + | IS1341-type transposase (nonfunctional,N-terminal part) TERM 1332 2800623 - 2800633 + F 73 -4.6 -4.85599 | GCGGCAATGAATGTC CTGC AAC GCGG TTTTTCTGAAGTAGG TERM 1333 2800760 - 2800738 - f 86 -13.4 -3.47029 | opp_overlap 2800736 TCATCGAAACAGGAA GCCTCGGGGC TTG ACCCCGAGAC GGTTCACTCGGCTAT TERM 1334 2800913 - 2800889 - f 79 -10.7 -3.53722 | opp_overlap 2800908 GGGAGATCGACACAA CCGATAACGGC ACA GTCGTCATCGG ATTCCCGTGTGTTTC TERM 1335 2801538 - 2801551 + F 78 -5.3 -5.0916 | GTTCAATTGGAACTC GTGAT GAAG ATCAC TTTTTATATTCGGAG HQ3435A 2801969 - 2803114 + | posible NMD protein affecting ribosome stability and mRNA decay dinG 2806193 - 2804448 - | Rad3-related DNA helicases DinG HQ3437A 2806506 - 2806303 - | hypothetical protein HQ3438A 2806905 - 2807642 + | hypothetical protein HQ3439A 2808107 - 2809102 + | hypothetical protein HQ3440A 2809464 - 2809168 - | hypothetical protein TERM 1336 2809515 - 2809503 - H 70 -4.9 -4.5442 | opp_overlap 2809507, overlap 2809507 TTTTCAATGATAAAA TATAG ACT CTATA GAGACCTTAATTATC HQ3441A 2809588 - 2810403 + | hypothetical protein HQ3442A 2811933 - 2811415 - | hypothetical protein hemB 2812044 - 2813030 + | delta-aminolevulinic acid dehydratase TERM 1337 2813489 - 2813503 + G 73 -7.8 -4.11027 | AGAATATGACTGATT GGACGC TTG GCGTTC TTGTCTTTTTCATCG amtB 2813317 - 2814729 + | ammonium transporter glnK 2814722 - 2815084 + | nitrogen regulatory protein P-II HQ3446A 2815446 - 2815258 - | hypothetical protein hemL 2815728 - 2817068 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 1338 2817519 - 2817483 - g 93 -13.8 -3.75015 | AGAACGCTGACGAAA TTCTCGACGAACGCGT TGCCG ACGCGTTCACCGAGGA TGATGGAGACGAACC TERM 1339 2817733 - 2817690 - g 90 -13.1 -3.69283 | opp_overlap 2817693, overlap 2817693 TAACTGAGCCAACAA TCACCCGACCGCTGGTGAA AATTGA TACACCAGCGGCCGGGTTC TATGCACTCAACGGT TERM 1340 2817730 - 2817693 - g 100 -19.2 -2.94872 | opp_overlap 2817693, overlap 2817690 CTGAGCCAACAATCA CCCGACCGCTGGTGAA AATTGA TACACCAGCGGCCGGG TTCTATGCACTCAAC TERM 1341 2817693 - 2817730 + G 100 -17 -3.50393 | opp_overlap 2817693 2817690 CTGAGCCAACAATCA CCCGACCGCTGGTGAA AATTGA TACACCAGCGGCCGGG TTCTATGCACTCAAC TERM 1342 2817850 - 2817815 - g 78 -11.9 -2.94099 | opp_overlap 2817816 2817817 2817826, overlap 2817792 2817788 2817826 TGTTTCGAGGAGATA CGCGAGCAGAATCCG GGTCAA CGGATTCTGCTCGTC TTGGATAATTTCTCA TERM 1343 2817816 - 2817850 + G 100 -15.2 -3.17798 | gap 1, opp_overlap 2817792 2817788 2817815 2817826, overlap 2817817 2817826 GTTTCGAGGAGATAC G-CGAGCAGAATCCG GGTCAA CGGATTCTGCTCGTC TTGGATAATTTCTCA TERM 1344 2817817 - 2817848 + G 100 -18.9 -3.14454 | opp_overlap 2817792 2817788 2817815 2817826, overlap 2817816 2817826 TTTCGAGGAGATACG CGAGCAGAATCCG GGTCAA CGGATTCTGCTCG TCTTGGATAATTTCT HQ3448A 2817230 - 2818129 + | transposase TERM 1345 2818276 - 2818294 + F 77 -10.3 -3.39803 | opp_overlap 2818276 CAGCCGTTTGACGAA GGTGAGC CGCTT GCTCACC TTCTCGCTGTCAGTC TERM 1346 2818294 - 2818276 - f 74 -10.3 -3.14344 | opp_overlap 2818276 CAGCCGTTTGACGAA GGTGAGC CGCTT GCTCACC TTCTCGCTGTCAGTC TERM 1347 2818327 - 2818359 + F 71 -7.1 -4.08974 | gap 1, opp_overlap 2818321 TGTGAGCAAGCGGTC GAGATCGTCC-TCA CTGAGA TGTCGGACGATCTC TTTCTCTCGTCCAGT hemC 2818771 - 2819955 + | hydroxymethylbilane synthase (porphobilinogen deaminase) hemX 2819962 - 2820774 + | uroporphyrin-III C-methyltransferase hemD 2820843 - 2821628 + | uroporphyrinogen-III synthase HQ3453A 2821708 - 2822121 + | hypothetical protein metY 2822424 - 2823722 + | O-acetylhomoserine aminocarboxypropyltransferase; methionine synthase pitA 2824064 - 2825221 + | phosphate permease fdx 2825660 - 2826076 + | ferredoxin (2Fe-2S) TERM 1348 2826179 - 2826160 - T 77 -10.7 -3.33661 | overlap 2826158 GAGTCAAGGAGAATA CCTGCGG GTTTAG CCGCAGG ATGAATCCGACACCT TERM 1349 2826810 - 2826829 + T 73 -10.6 -2.99161 | overlap 2826809 2826824 2826825 TATAGTTGACATCCT CCCCGCGC TGAA GCGCGAGG CTTTCTCCTCGATTC HQ3458A 2827775 - 2826990 - | hypothetical protein mdhA 2827927 - 2828838 + | malate dehydrogenase HQ3460A 2829663 - 2830082 + | polA operon protein ( DNA-binding protein) TERM 1350 2834440 - 2834412 - g 93 -14 -3.3363 | overlap 2834407 CGAATAATAATGCAA TCCATCAGTCAC GCCAG GTGACCGATGGA GGGAGGAAGGATTAC polA2 2830085 - 2836954 + | DNA polymerase II large subunit TERM 1351 2837317 - 2837351 + G 79 -11.6 -3.22091 | gap 2, opp_overlap 2837316 2837315, overlap 2837323 TGCAGACCCCAAACG GTGAAG--CCTCGGGG CTTGA CCCCGAGGTACTTCAC TTCCTGAGTTCACGT TERM 1352 2837323 - 2837343 + G 88 -14 -2.79684 | opp_overlap 2837316 2837315, overlap 2837317 CCCCAAACGGTGAAG CCTCGGGG CTTGA CCCCGAGG TACTTCACTTCCTGA HQ3462A 2837301 - 2837411 + | hypothetical protein TERM 1353 2837625 - 2837604 - g 83 -11.5 -3.60234 | overlap 2837596 2837588 2837605 TGACAGAGTCCGAAA CGGACGCGG CTAC CCGCGCCCA ATCCGAAAAGGACAG TERM 1354 2837624 - 2837605 - g 81 -12.8 -2.75819 | overlap 2837596 2837588 2837604 GACAGAGTCCGAAAC GGACGCGG CTAC CCGCGCCC AATCCGAAAAGGACA HQ3463A 2837588 - 2838376 + | phosphatase-like protein aslA 2840117 - 2838513 - | arylsulfatase; choline-sulfatase HQ3465A 2840824 - 2840453 - | NifU domain-containing protein HQ3466A 2841191 - 2840850 - | hypothetical protein hmu3 2848306 - 2842067 - | cell surface glycoprotein HQ3468A 2849924 - 2848443 - | cell surface glycoprotein TERM 1355 2849698 - 2849682 - G 73 -2.3 -5.10461 | GCTATTGAATAAAAA GAGAT TGACATT ATCTC CAGATGGGGCGTCGA HQ3469A 2851493 - 2849973 - | cell surface glycoprotein TERM 1356 2853009 - 2853048 + H 76 -8.7 -4.13654 | gap 1, opp_overlap 2853014, overlap 2853010 2853014 TAATCACGGAACTCG AAGAAGAGATAGGTGTGC CTGCA GC-CACCTATCTCTTCGA TTTGTGGTTTGCCCA TERM 1357 2853010 - 2853047 + H 80 -12.2 -3.0771 | gap 1, opp_overlap 2853014, overlap 2853009 2853014 AATCACGGAACTCGA AGAAGAGATAGGTGTGC CTGCA GC-CACCTATCTCTTCG ATTTGTGGTTTGCCC TERM 1358 2853014 - 2853043 + H 82 -11.6 -3.36128 | gap 1, opp_overlap 2853014, overlap 2853010 2853009 ACGGAACTCGAAGAA GAGATAGGTGTGC CTGCA GC-CACCTATCTC TTCGATTTGTGGTTT TERM 1359 2853043 - 2853014 - H 93 -12.3 -3.6849 | gap 1, opp_overlap 2853014 2853010 2853009 ACGGAACTCGAAGAA GAGATAGGTGTGCC TGC AGC-CACCTATCTC TTCGATTTGTGGTTT TERM 1360 2853489 - 2853454 - g 76 -9 -3.89346 | opp_overlap 2853455 2853463, overlap 2853455 CTGTGAGGTGAGAAA TTCTGACGGTGCCAGT ATCG ACTGGCATCTTCAGAT GTTGACCGACAGTCT TERM 1361 2853455 - 2853488 + G 91 -14.7 -3.01924 | opp_overlap 2853454 2853455, overlap 2853463 TGTGAGGTGAGAAAT TCTGACGGTGCCAGT ATCG ACTGGCATCTTCAGA TGTTGACCGACAGTC TERM 1362 2853488 - 2853455 - g 81 -12.5 -2.93393 | opp_overlap 2853455 2853463, overlap 2853454 TGTGAGGTGAGAAAT TCTGACGGTGCCAGT ATCG ACTGGCATCTTCAGA TGTTGACCGACAGTC TERM 1363 2853463 - 2853480 + G 70 -9.9 -3.0976 | opp_overlap 2853455 2853454, overlap 2853455 GAGAAATTCTGACGG TGCCAGT ATCG ACTGGCA TCTTCAGATGTTGAC TERM 1364 2853658 - 2853680 + G 81 -12.8 -2.52543 | overlap 2853662 TCTCAATGGTCTGAT GGGAGAGATG GAC CATCTCTTCC TCCATTCCAAGGGAT HQ3472A 2853023 - 2853712 + | transposase TERM 1365 2853904 - 2853919 + F 77 -9 -3.91897 | opp_overlap 2853896 TATGAAAGTGGTGAC CACGGT ATTC ACCGTG TTTGTCCCTCCAGCA HQ3473A 2854534 - 2855661 + | hypothetical protein moxR 2855651 - 2856715 + | MoxR-like ATPase (methanol dehydrogenase regulatory protein) HQ3475A 2857167 - 2857442 + | hypothetical protein lolE 2858951 - 2857731 - | ABC transporter permease lolC 2860225 - 2858948 - | ABC transporter permease lolD 2860964 - 2860218 - | ABC transporter ATP-binding protein LolDE TERM 1366 2860520 - 2860538 + g 73 -8.1 -4.07885 | overlap 2860515 CAAGAAGCGTTTCGG CGCGCTC ATGCC GAGTGCG TTTTCCAACGCCATG HQ3479A 2863282 - 2861027 - | extracellular mucin like protein HQ3480A 2863502 - 2865124 + | hypothetical protein HQ3481A 2865183 - 2865740 + | hypothetical protein HQ3482A 2865737 - 2866759 + | hypothetical protein mutT 2867030 - 2867521 + | Mut/nudix family protein HQ3484A 2869006 - 2867762 - | IS1341-type transposase TERM 1367 2868224 - 2868245 + g 72 -10.2 -3.06831 | CGCGAGCAATTCGTT GCTGATGC GGTGCA GCATCAGC TTGAATCGACCTTCC TERM 1368 2870144 - 2870162 + r 78 -12.4 -2.66435 | overlap 2870140 CTCCAGGGGTACCAC GGGGAGGG TGA CCCTCTCC TGATGTGATGCCGAT HQ3485A 2871334 - 2870774 - | hypothetical protein TERM 1369 2871403 - 2871360 - R 83 -4.4 -5.27923 | opp_overlap 2871362, overlap 2871361 2871371 GAATCTTACAAAAAA TGTGGCAGAAACCCCACGGT TTTT ACCATGTGGTAAATGCCACT CGTTAGATAGACAAA HQ3486A 2871893 - 2871435 - | hypothetical protein HQ3487A 2872448 - 2872011 - | hypothetical protein HQ3488A 2872479 - 2872607 + | hypothetical protein HQ3491A 2873366 - 2873103 - | transcription regulator TERM 1370 2873326 - 2873351 + g 79 -11.9 -3.16683 | ATCGTGATCTGTCCT TTCGAGGTGAC CGTG GTCACCTCGGG TTCGTCAGATGCCAT TERM 1371 2873506 - 2873528 + r 81 -12.6 -3.27298 | opp_overlap 2873507, overlap 2873507 CCGCAGCGTGAACCC ACCCCGGGGT CAA GCCCCGGGGC TTCCTGCTTCCACGA TERM 1372 2873527 - 2873507 - R 90 -15.4 -2.53263 | opp_overlap 2873506 2873507 CGCAGCGTGAACCCA CCCCGGGG TCAAG CCCCGGGG CTTCCTGCTTCCACG TERM 1373 2873507 - 2873527 + r 90 -16.1 -2.56164 | opp_overlap 2873507, overlap 2873506 CGCAGCGTGAACCCA CCCCGGGGT CAA GCCCCGGGG CTTCCTGCTTCCACG HQ3493A 2874007 - 2873708 - | hypothetical protein HQ3494A 2874686 - 2873994 - | hypothetical protein TERM 1374 2874143 - 2874171 + g 82 -11.7 -3.42702 | overlap 2874116 2874141 TATGTGGCTCGTACC GATCTCCGTCGAA CTG TTCGTCGGCGATC TCTTGTTCAATGGTA TERM 1375 2874843 - 2874833 - H 71 -6.8 -4.12532 | opp_overlap 2874838 TCCGTCATACATAAA CGAG GTC CTCG GTGACGCGGGATTTG TERM 1376 2875388 - 2875366 - H 100 -17 -3.6579 | opp_overlap 2875364 AATCCACGGGAAGAA GCTCCGGGGC TTG ACCCCGGAGC AGTTCACTGGAGTCT HQ3496A 2875560 - 2875832 + | transcriptional regulator HQ3497A 2875829 - 2876266 + | hypothetical protein TERM 1377 2877721 - 2877694 - g 74 -9.8 -3.55219 | overlap 2877695 AACTCTACGATACAA TCGAGGCGACCC GCGA GAATCGCCTCGC ATCCGCCAACTGACT TERM 1378 2877720 - 2877695 - g 84 -13.3 -2.72649 | overlap 2877694 ACTCTACGATACAAT CGAGGCGACCC GCGA GAATCGCCTCG CATCCGCCAACTGAC HQ3499A 2877216 - 2877734 + | hypothetical protein TERM 1379 2877899 - 2877910 + G 77 -4.4 -5.14965 | overlap 2877884 2877885 CTCGCGGCGACGCTC GATC GCGC GATC TTTTTTGCTCAGGAT HQ3500A 2877749 - 2878222 + | hypothetical protein TERM 1380 2878285 - 2878273 - f 73 -10.5 -3.00022 | opp_overlap 2878272 GTTAGCTGATAGAGA GGGGC TAA GCCCC CTTCCTCAAGCAGCG HQ3501A 2878736 - 2879152 + | hypothetical protein HQ3502A 2879666 - 2879809 + | hypothetical protein HQ3503A 2881247 - 2882488 + | glycosyltransferase ( dolichyl-P-glucose synthetase) HQ3505A 2883567 - 2884025 + | hypothetical protein HQ3506A 2884018 - 2884518 + | hypothetical protein graD 2885951 - 2885196 - | sugar nucleotidyltransferase II ( glucose-1-phosphate thymidylyltransferase) nudF 2886554 - 2887075 + | ADP-ribose pyrophosphatase galE 2888570 - 2887551 - | nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) galE 2889604 - 2888567 - | nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) TERM 1381 2888832 - 2888850 + g 71 -3.8 -4.7033 | overlap 2888833 2888834 TCTCCGTTCCCCAGA TTGATGGG CTC TCCATCGG TTTTGTGTTCCATTG HQ3511A 2889693 - 2890700 + | hypothetical protein HQ3512A 2890722 - 2891705 + | SAM-dependent methyltransferase HQ3513A 2892339 - 2891788 - | hypothetical protein HQ3514A 2892477 - 2892346 - | hypothetical protein TERM 1382 2893372 - 2893345 - R 87 -14.8 -2.83894 | gap 1, overlap 2893334 ACGACCACTACCAGA GGCGGTGCCC-CC CAA GGCGGGCGCCGCC ACGTACCTCCAGTGA HQ3515A 2893723 - 2893502 - | hypothetical protein TERM 1383 2893590 - 2893559 - G 100 -18.8 -3.85698 | gap 1, opp_overlap 2893567 2893570, overlap 2893560 TGGCGTGTTGATAAA CGGCGCGTCAGCGGC GTA GCCG-TGACGCGCCA CCCCGTGTTCGTCGT TERM 1384 2893589 - 2893560 - G 100 -20.1 -2.91276 | gap 1, opp_overlap 2893567 2893570, overlap 2893559 GGCGTGTTGATAAAC GGCGCGTCAGCGGC GTA GCCG-TGACGCGCC ACCCCGTGTTCGTCG TERM 1385 2893851 - 2893904 + r 100 -17.7 -3.05384 | gap 3, opp_overlap 2893881, overlap 2893854 CGAGGAACTCGGCGA GG-ACATTGCTGGTGGTGTCGCCAGC GACAA GCTGGCG-CACCGCCAGCG-TGTACC TTGCGTACCCGCGCG TERM 1386 2893854 - 2893900 + r 100 -18.2 -2.54896 | gap 2, opp_overlap 2893881, overlap 2893851 GGAACTCGGCGAGGA CATTGCTGGTGGTGTCGCCAGC GACAA GCTGGCG-CACCGCCAGCG-TG TACCTTGCGTACCCG TERM 1387 2893897 - 2893881 - R 90 -13.7 -3.35679 | opp_overlap 2893854 2893851 TGTCGCCAGCGACAA GCTGGCG CAC CGCCAGC GTGTACCTTGCGTAC HQ3516A 2894319 - 2893930 - | ISH3-type transposase (fragment) gpmB 2895415 - 2894825 - | fructose-2,6-bisphosphatase; phosphoglyceromutase,type 2 TERM 1388 2895110 - 2895121 + g 71 -4.4 -4.83243 | CTGTTCCCGTCTAGC CCAA AACT TTGG TTTCTTTTGTCTAAG neuA 2896139 - 2895420 - | acylneuraminate cytidylyltransferase neuB 2897322 - 2896147 - | sialic acid synthase (N-acetylneuraminate synthase) (N-acetylneuraminic acid synthase) (N-acetylneuraminate-9-phosphate synthase) (N-acetylneuraminic acid phosphate synthase) TERM 1389 2896192 - 2896207 + g 90 -2.6 -5.73339 | gap 1 CTCGTTGCTATAGGT GTTCTCT TCA AG-GAAC TTTTTTTCTAATTCT TERM 1390 2897757 - 2897731 - R 82 -10.9 -3.62096 | gap 1, opp_overlap 2897735 TCCGACCAGTCGAAA CGTCCGAGTCGC GCTG GCG-CTCGAACG AGAGTGTGATTCGTT TERM 1391 2897781 - 2897815 + r 100 -23 -3.02324 | overlap 2897776 ATTCGTTGATTTCCT GTCGCTGCAGGTCGTC GAG GACGGTCTGCAGCGAC TCTCCTTTCAGTGGG HQ3520A 2898194 - 2897823 - | transposase (ISH5) TERM 1392 2898010 - 2897972 - G 76 -9.6 -3.724 | gap 1, opp_overlap 2897972 2897976, overlap 2897974 AATCGAGGAAGATAA GAGCGTCAGCTACCCAC TCGCCG GTGGGTCGCTGACTC-C GTTCATAACTCGTCC TERM 1393 2898009 - 2897974 - G 91 -13.3 -3.43722 | opp_overlap 2897972 2897976, overlap 2897972 TCGAGGAAGATAAGA GCGTCAGCTACCCAC TCGCCG GTGGGTCGCTGACTC CGTTCATAACTCGTC TERM 1394 2897976 - 2898007 + g 95 -15.2 -2.57244 | opp_overlap 2897974 2897972, overlap 2897972 GAGGAAGATAAGAGC GTCAGCTACCCACT CGCC GGTGGGTCGCTGAC TCCGTTCATAACTCG HQ3521A 2898436 - 2898266 - | transposase (ISH5) (fragment) TERM 1395 2898336 - 2898357 + g 76 -11.7 -2.87132 | CGTCCGGTATCGAGA TTCTCGATG GCGT CATCGAGAA TCTCTCGAAGCAAGG HQ3522A 2899682 - 2898735 - | hypothetical protein TERM 1396 2899918 - 2899955 + r 93 -15.6 -2.92642 | gap 1, overlap 2899950 ATTTCTTCGCTCCCA CTGCCGGGTGTCGAGGG AAGCC CCCTCGAC-CCCGGCGA TATCTGGCTCGTCGT TERM 1397 2900365 - 2900344 - R 100 -14.5 -3.727 | TCGATGACACCGAAA GATGGCACG ACCA CGTGCCATC GATACTGGACAGCGT TERM 1398 2900413 - 2900401 - R 76 -7.7 -4.27316 | GTTTCCAACGGAAAA CCAGT GAC ACTGG CCATGACGTACGTTC TERM 1399 2900480 - 2900446 - R 76 -12.1 -2.58617 | gap 1, overlap 2900445 2900443 AACGACGAAACAGAG GCTGACGCGGTCGAGC GCGT GCTCGCCCGCGTC-GA AAATTACCCTGTTGA TERM 1400 2900655 - 2900698 + r 87 -14.6 -2.78384 | gap 1, opp_overlap 2900629 2900659, overlap 2900657 GACCTATCGCCTGTA CAAAGACAGCGAGCGGGA-AC TCC GTGTCCCGCTCGCGGTCGCTG TCTCCTCCCAGAACG TERM 1401 2900657 - 2900696 + r 75 -11.4 -2.94099 | gap 1, opp_overlap 2900659, overlap 2900655 CCTATCGCCTGTACA AAGACAGCGAGCGGGA-AC TCC GTGTCCCGCTCGCGGTCGC TGTCTCCTCCCAGAA TERM 1402 2900694 - 2900659 - R 100 -18.4 -3.86015 | gap 1, opp_overlap 2900657 2900655 TATCGCCTGTACAAA GACAGCGAGCGGGA-AC TCC GTGTCCCGCTCGCGGTC GCTGTCTCCTCCCAG TERM 1403 2900843 - 2900881 + r 86 -11.2 -3.79043 | gap 3, overlap 2900846 CGGTTGATTCGGCAG CCG--CGA-GGGGTCACGA GTCG TCGTGACCCCGTCGTTCGG TTTGCCTTCATGCTC TERM 1404 2900846 - 2900876 + r 100 -16.3 -3.30781 | gap 1, overlap 2900843 TTGATTCGGCAGCCG CGA-GGGGTCACGA GTCG TCGTGACCCCGTCG TTCGGTTTGCCTTCA TERM 1405 2900942 - 2900974 + r 80 -12.7 -3.06133 | gap 1 GTGCTTCGATGGGCC GTCGTCGCCCGCCC GCAGCG GGGCGGGCG-CGAG TTACCTGAAGAGTTC TERM 1406 2901135 - 2901101 - R 100 -17.9 -3.26471 | gap 1, overlap 2901102 CCACCGTCATACCAA GCGGCCGCGGGCTGAC CACG GTCAGCCC-CGGCCGG TCTGCCTCTGGATGA TERM 1407 2901134 - 2901102 - R 100 -21.4 -2.55668 | gap 1, overlap 2901101 CACCGTCATACCAAG CGGCCGCGGGCTGAC CACG GTCAGCCC-CGGCCG GTCTGCCTCTGGATG HQ3524A 2903107 - 2901959 - | protein transglucosylase HQ3525A 2903621 - 2903292 - | hypothetical protein TERM 1408 2903625 - 2903651 + r 73 -11 -2.7204 | opp_overlap 2903623, overlap 2903621 AGCACCTGACACATC CTCACATTTGAT TTG ATCTAATGTGAG TAAGTTTGTGAGTTC bcbD 2905141 - 2904305 - | capsular protein TERM 1409 2905006 - 2905022 + g 79 -2.3 -5.47218 | opp_overlap 2905021 TATTATCAACCAATC TATTTGT AAT ACCAATA TTTTTTTCCGTGAAA HQ3527A 2905827 - 2905291 - | ISH9-type transposase (nonfunctional, C-terminal part) TERM 1410 2905402 - 2905364 - G 100 -16.1 -3.14463 | gap 2, opp_overlap 2905368 AATTCGCCGTACCAA GATC--GCGCACGCACGGC GTC GCCGAGCGTGCGCTTGATC GTCGAGAAGACTGTC TERM 1411 2905368 - 2905396 + g 100 -21.7 -3.21099 | opp_overlap 2905364 CGCCGTACCAAGATC GCGCACGCACGGC GTC GCCGAGCGTGCGC TTGATCGTCGAGAAG TERM 1412 2905564 - 2905622 + g 100 -21.8 -2.8001 | gap 1, overlap 2905566 2905569 2905589 ATCGTAGCCTTTGTC CGCAGCGAGGCTGGTGAGGTCGCCCGC GTTGCG GCGGGCGACCT-GCCAGCCGAGTTGTG TGTCGTGACGCTTCT TERM 1413 2905566 - 2905620 + g 100 -20.8 -2.94595 | gap 1, overlap 2905564 2905569 2905589 CGTAGCCTTTGTCCG CAGCGAGGCTGGTGAGGTCGCCCGC GTTGCG GCGGGCGACCT-GCCAGCCGAGTTG TGTGTCGTGACGCTT TERM 1414 2905569 - 2905617 + g 100 -18.9 -3.61902 | gap 1, overlap 2905566 2905564 2905589 AGCCTTTGTCCGCAG CGAGGCTGGTGAGGTCGCCCGC GTTGCG GCGGGCGACCT-GCCAGCCGAG TTGTGTGTCGTGACG TERM 1415 2905785 - 2905843 + g 79 -11.8 -3.24747 | gap 3, opp_overlap 2905766, overlap 2905787 2905790 2905822 CATCGATCGCGGCGT GAC--CGCTCGGGT-CGTGCAGCTGCGCC GAGA GGCGCAGCAGCACTCACCAGAGTGCTGTC TTGATCCTGTCAAAC TERM 1416 2905787 - 2905839 + g 91 -14.8 -3.15407 | gap 1, overlap 2905785 2905790 2905822 TCGATCGCGGCGTGA CCGCTCGGGT-CGTGCAGCTGCGCC GAGA GGCGCAGCAGCACTCACCAGAGTGC TGTCTTGATCCTGTC TERM 1417 2905790 - 2905836 + g 100 -17.3 -2.77416 | gap 1, overlap 2905787 2905785 2905822 ATCGCGGCGTGACCG CTCGGGT-CGTGCAGCTGCGCC GAGA GGCGCAGCAGCACTCACCAGAG TGCTGTCTTGATCCT TERM 1418 2905822 - 2905841 + g 82 -12.2 -3.18849 | overlap 2905790 2905787 2905785 CGCCGAGAGGCGCAG CAGCACTC ACCA GAGTGCTG TCTTGATCCTGTCAA HQ3527B 2906115 - 2905828 - | ISH9-type transposase (nonfunctional, N-terminal part) TERM 1419 2906058 - 2906003 - G 100 -17.7 -2.8655 | gap 3 TGGAGCGATACGACA GCGTAGTC--GGCGAAGCCGCCACCCCC TTC GGGGGCGGCGACTTCGCCTCGGCCAC-C AACAGCATTTTTAGC TERM 1420 2906094 - 2906139 + g 79 -10.5 -3.72984 | opp_overlap 2906082 GAACCGCTTTCTTCG TGAAGCGGGATATCTTCGA CATGGACA TCGGCGGTTTCCCGCTTCA TTTCACTAGTTCTGA TERM 1421 2906605 - 2906594 - H 85 -7.2 -5.00895 | opp_overlap 2906594 CTGAGTATATAAAAA CGGC GTGA GCCG TTAGTGACGACCCGT TERM 1422 2906716 - 2906743 + G 89 -15 -2.53263 | gap 1, opp_overlap 2906711 2906732 CGCTGACGAACTGTA CTCGCTGCTCGAC GAA GTCGA-CAGCGAG TCGATTGCCGATGAG TERM 1423 2906952 - 2906922 - g 90 -14.8 -2.59431 | opp_overlap 2906921, overlap 2906918 2906926 GGTTTTCAGAACTCA CGAACGACCGCG ACTACTG CGCGGTCGTTCA GCTCCTCTTCGAAGT TERM 1424 2906948 - 2906926 - g 82 -12 -3.23711 | opp_overlap 2906921, overlap 2906922 2906918 TTCAGAACTCACGAA CGACCGCG ACTACTG CGCGGTCG TTCAGCTCCTCTTCG TERM 1425 2907288 - 2907260 - g 87 -12.6 -3.34013 | gap 1, opp_overlap 2907242 2907258 2907286, overlap 2907263 GATCTCCTCAAGGAA GATGTCGAGGTCT TTGC AGACCTCGAC-TC GGTAATCTGGGTCTG TERM 1426 2907286 - 2907263 - g 95 -15.4 -2.54098 | opp_overlap 2907242 2907258, overlap 2907260 CTCCTCAAGGAAGAT GTCGAGGTCT TTGC AGACCTCGAC TCGGTAATCTGGGTC TERM 1427 2907773 - 2907805 + G 100 -17.1 -2.85351 | gap 1, overlap 2907803 CTGGTCGTATGGTTT CGCCAACGCCACCC AGTCAA GGGTGGCG-TGGCG TGTGCTATCCAGAAA HQ3528A 2906609 - 2907862 + | transposase (ISH8/ISH26) HQ3529A 2908659 - 2908258 - | sulfatase HQ3530A 2909640 - 2908723 - | hypothetical protein HQ3531A 2911210 - 2910320 - | hypothetical protein HQ3532A 2911468 - 2912664 + | hexosyltransferase; glycosyltransferase TERM 1428 2913687 - 2913675 - g 71 -2.6 -4.87291 | overlap 2913685 GATGCGAATGAAAAA CGAC AACAA GCCG CTCAGGCAGGAACAC TERM 1429 2914321 - 2914343 + G 77 -8.4 -4.1891 | opp_overlap 2914319 CTTGGCGAGATCAGC TGGCAGTTGT CAG ACAGCAGCCA TTTATATTCAGCGAC HQ3533A 2913009 - 2914811 + | ABC-type multidrug/lipid transport system,permease and ATP-binding protein HQ3534A 2916207 - 2915902 - | hypothetical protein HQ3536A 2917032 - 2917910 + | hypothetical protein TERM 1430 2918049 - 2918026 - g 71 -7.4 -4.07568 | gap 1 CCTCTGCCTCGAAAA CGTTCGCTGGG ATT CCC-GTGAACG AAATAGTTCCTCTTG HQ3537A 2917911 - 2918672 + | hypothetical protein HQ3538A 2918672 - 2919604 + | hypothetical protein HQ3539A 2920934 - 2919798 - | hexosyltransferase; glycosyltransferase aslA 2921067 - 2922347 + | arylsulfatase HQ3541A 2922344 - 2922460 + | hypothetical protein HQ3542A 2922457 - 2922669 + | hypothetical protein HQ3543A 2922698 - 2923978 + | arylsulfatase HQ3544A 2924071 - 2925195 + | hexosyltransferase; glycosyltransferase HQ3545A 2925274 - 2926383 + | arylsulfatase A-like HQ3546A 2926484 - 2928343 + | hypothetical protein HQ3547A 2929364 - 2928348 - | hexosyltransferase; glycosyltransferase TERM 1431 2928461 - 2928471 + g 71 -2.6 -4.84359 | GTGAAATTCGTTTCT TATA ATT TATA TTTTTATCGAAATAA TERM 1432 2929117 - 2929135 + g 85 -5.4 -5.29445 | AAAAAATGATCTGCA CAAAGATA AAT TATTTTTG TTTTTCTTATTAACC HQ3548A 2930284 - 2929361 - | hypothetical protein TERM 1433 2930251 - 2930263 + g 71 -4.7 -4.57569 | opp_overlap 2930251 GTTTAGGACTAGAGA GACCG AGA CGGAC TTTTTGGAACCATGA HQ3549A 2931546 - 2930368 - | hexosyltransferase; glycosyltransferase HQ3550A 2932274 - 2931564 - | hypothetical protein TERM 1434 2932465 - 2932426 - R 86 -14.4 -2.62983 | gap 1 TCGATGGTCAGATGA GGTGA-CGTGTCCGCACTG CTG CAGTGCGGACACGATCAAG AAAGGAATAACCCGG HQ3551A 2933773 - 2933102 - | transposase homolog (ISHnew96) TERM 1435 2933277 - 2933313 + g 81 -10.7 -3.75015 | overlap 2933278 TTATCTGGCTGTTCG CCCTCGTCGAGCGCGTC ATC GACCCGCTCTTCGAGGA TTTCATCAGGGTTCT TERM 1436 2933278 - 2933312 + g 88 -14.2 -2.84527 | overlap 2933277 TATCTGGCTGTTCGC CCTCGTCGAGCGCGTC ATC GACCCGCTCTTCGAGG ATTTCATCAGGGTTC TERM 1437 2933593 - 2933637 + g 90 -14.1 -3.06302 | opp_overlap 2933580 CATCCGCCCAGCGAC CACCGGTGGCGGCCGACCG ACCTTCG CGGTCGGCAGCCTCCGGGA TTGAGTCGCCATGGT TERM 1438 2933991 - 2934025 + G 83 -11.4 -3.56142 | opp_overlap 2933982, overlap 2933987 2933996 ACAAACCGCCGGTCG TTACACTCGTCCGTCG CTC CGACGGACGAGTTCGG TTCCTTGTTCGTGAG TERM 1439 2933996 - 2934020 + G 100 -20.1 -3.26428 | opp_overlap 2933982, overlap 2933991 2933987 CCGCCGGTCGTTACA CTCGTCCGTCG CTC CGACGGACGAG TTCGGTTCCTTGTTC HQ3552A 2933897 - 2934370 + | ISH4-type transposase HQ3553A 2934534 - 2934791 + | transposase (ISH8/ISH26) TERM 1440 2934864 - 2934902 + G 78 -10.9 -3.36327 | gap 1, opp_overlap 2934866 2934867, overlap 2934867 CAGTGTTTCCGTCAG AACGCTGGGCG-GCGACC TCCC GGTCGCACGCCCAGCTCA TTCTCCATGAACTGA TERM 1441 2934900 - 2934866 - g 100 -17.9 -3.28712 | gap 1, opp_overlap 2934864 2934867, overlap 2934867 GTGTTTCCGTCAGAA CGCTGGGCG-GCGACC TCCC GGTCGCACGCCCAGCT CATTCTCCATGAACT TERM 1442 2934867 - 2934899 + G 100 -21.4 -2.8474 | gap 1, opp_overlap 2934867 2934866, overlap 2934864 TGTTTCCGTCAGAAC GCTGGGCG-GCGACC TCCC GGTCGCACGCCCAGC TCATTCTCCATGAAC TERM 1443 2934899 - 2934867 - g 100 -21.4 -2.57132 | gap 1, opp_overlap 2934864 2934867, overlap 2934866 TGTTTCCGTCAGAAC GCTGGGCG-GCGACC TCCC GGTCGCACGCCCAGC TCATTCTCCATGAAC HQ3554A 2934800 - 2935006 + | transposase (ISH8/ISH26) TERM 1444 2935101 - 2935075 - f 100 -16.6 -3.78775 | opp_overlap 2935060, overlap 2935060 GCTGTTACCACGAAA GGCGTGGACATC AGC GTTGTCCACGCC GATACCACCTCCAAG TERM 1445 2935479 - 2935468 - f 85 -7.2 -5.00895 | opp_overlap 2935468 2935473 CTGAGTATATAAAAA CGGC GTGA GCCG TTAGTGACGGCCCGT TERM 1446 2935591 - 2935618 + G 89 -15 -2.53263 | gap 1, opp_overlap 2935586 2935607 CGCTGACGAACTGTA CTCGCTGCTCGAC GAA GTCGA-CAGCGAG TCGATTGCCGATGAG TERM 1447 2935827 - 2935797 - g 90 -14.8 -2.59431 | opp_overlap 2935796, overlap 2935793 2935801 GGTTTTCAGAACTCA CGAACGACCGCG ACTACTG CGCGGTCGTTCA GCTCCTCTTCGAAGT TERM 1448 2935823 - 2935801 - g 82 -12 -3.23711 | opp_overlap 2935796, overlap 2935797 2935793 TTCAGAACTCACGAA CGACCGCG ACTACTG CGCGGTCG TTCAGCTCCTCTTCG TERM 1449 2936163 - 2936135 - g 87 -12.6 -3.34013 | gap 1, opp_overlap 2936117 2936133 2936161, overlap 2936138 GATCTCCTCAAGGAA GATGTCGAGGTCT TTGC AGACCTCGAC-TC GGTAATCTGGGTCTG TERM 1450 2936161 - 2936138 - g 95 -15.4 -2.54098 | opp_overlap 2936117 2936133, overlap 2936135 CTCCTCAAGGAAGAT GTCGAGGTCT TTGC AGACCTCGAC TCGGTAATCTGGGTC TERM 1451 2936648 - 2936682 + G 84 -13.6 -2.62263 | gap 1, overlap 2936680 CTGGTCGTATGGTTT CGC-CAACGCCACCC AGTCAA GGGTGGCGTGGCGCG TGCTATCCAGAAAGT HQ3555A 2935496 - 2936737 + | transposase (ISH8/ISH26) TERM 1452 2936745 - 2936799 + F 72 -10.6 -2.83674 | gap 1, opp_overlap 2936743, overlap 2936798 TCGGCTAATCAATCT TCACTTC-CCGGCGACAGCCGTCAC CCACCA GCGACGGCTGTCGCCTGTGCCGCGA TCATTGATCATTTCT TERM 1453 2936998 - 2937008 + G 74 -4 -4.91459 | GTTTTTTGTCAGTAT GAAT GGA ATTC TTTTTATCACTGTTG HQ3556A 2936933 - 2938315 + | sulfatase TERM 1454 2938653 - 2938611 - f 80 -13.4 -2.52543 | ACGTGGCTGAATGTA GGCCGGTACTTCCGGGGC CTGCTGC GCCCCGGAAGTTCCAACA CCGTCACTGACATCG TERM 1455 2938774 - 2938751 - f 90 -15.4 -2.65279 | overlap 2938747 GAACGTCGAAAGCGA GCTTCGGGAA CGCG TTCCCGAAGC GATCCAGAGCCCAGA TERM 1456 2939215 - 2939187 - g 91 -13.2 -3.30771 | opp_overlap 2939177 2939178 CGACACTTCGGAGAA GCCCGGAGTTTC AGACG GAAACTCCGTGC AATTCCCGAATCATA TERM 1457 2939381 - 2939361 - g 100 -16.9 -3.16881 | GAGCTACCCGAGGAA GTCGCCGAG GCA CTCGGCGAC GACGCCTGGACCGAG HQ3557A 2938812 - 2939507 + | ISRSO17-transposase TERM 1458 2939714 - 2939733 + F 80 -12.2 -3.03243 | overlap 2939700 GTGGAAGGGTGTCCA TCACCACC TCGC GGTGGTGA TGTTAGCCCATGCAT TERM 1459 2939949 - 2939971 + F 74 -11.3 -2.91383 | gap 1, opp_overlap 2939949 CTAAGCTCGACGAGA GCGCCTGCCG CTAG CGGCAG-CGC TCTCTCACTGACCGT TERM 1460 2939971 - 2939949 - f 74 -11.3 -2.79831 | gap 1, opp_overlap 2939949 CTAAGCTCGACGAGA GCGCCTGCCG CTAG CGGCAG-CGC TCTCTCACTGACCGT TERM 1461 2940192 - 2940177 - f 87 -10.4 -4.07526 | opp_overlap 2940178 AAGTACTGATAGAAA GCCTCC CGAG GGAGGC CGGAGGGTTTAGAAA TERM 1462 2940552 - 2940610 + G 78 -12.2 -2.52464 | opp_overlap 2940575, overlap 2940573 CGTCATTGACGATAT TTTCGATCGACTCGTCGAGCAGACCGCG ACT CGCGGCCTGCTTGACGATACGTACGCCA TCGATTCGACGCACA TERM 1463 2940587 - 2940575 - g 71 -10.5 -2.78596 | opp_overlap 2940573 2940552 GACTCGTCGAGCAGA CCGCG ACT CGCGG CCTGCTTGACGATAC TERM 1464 2940814 - 2940775 - g 71 -8.7 -3.68908 | gap 2, overlap 2940766 2940777 2940779 2940780 AAACAGGCATCGAAA GAGACGGCGATGCGCGTCA CTCG TGACGCGC-TCGCCAT-TG AACAATCGATGTGGA TERM 1465 2940813 - 2940777 - g 91 -13.8 -3.41836 | gap 1, overlap 2940766 2940775 2940779 2940780 ACAGGCATCGAAAGA GACGGCGATGCGCGTCA CTCG TGACGCGC-TCGCCATT GAACAATCGATGTGG TERM 1466 2940811 - 2940779 - g 100 -16.4 -3.27676 | gap 1, overlap 2940766 2940777 2940775 2940780 AGGCATCGAAAGAGA CGGCGATGCGCGTCA CTCG TGACGCGC-TCGCCA TTGAACAATCGATGT TERM 1467 2940810 - 2940780 - g 100 -17.7 -2.56124 | gap 1, overlap 2940766 2940779 2940777 2940775 GGCATCGAAAGAGAC GGCGATGCGCGTCA CTCG TGACGCGC-TCGCC ATTGAACAATCGATG TERM 1468 2940861 - 2940898 + G 73 -10.6 -3.18264 | gap 1, overlap 2940862 2940864 CTACGATGTCCTTGA CTGGCACGACCACCTGC TTACT GTAGG-GGTCGTGCCGA TTGCTCCGTACGACC TERM 1469 2940862 - 2940897 + G 87 -14.1 -2.50816 | gap 1, overlap 2940861 2940864 TACGATGTCCTTGAC TGGCACGACCACCTGC TTACT GTAGG-GGTCGTGCCG ATTGCTCCGTACGAC TERM 1470 2941102 - 2941062 - g 100 -21.2 -3.17688 | gap 1, overlap 2941065 CAACGATGCGATCAA GAACTGCGCCCTCGGGCGC GGAC GTGCCCGAGGGCGC-GTCC ATGCACGAACAGAGG TERM 1471 2941099 - 2941065 - g 100 -19.3 -3.7282 | gap 1, overlap 2941062 CGATGCGATCAAGAA CTGCGCCCTCGGGCGC GGAC GTGCCCGAGGGCGC-G TCCATGCACGAACAG HQ3558A 2940331 - 2941206 + | transposase (ISH11) TERM 1472 2941204 - 2941230 + T 71 -8 -3.87112 | opp_overlap 2941195, overlap 2941199 GAGAAACTCACCTTA TGAGACCGTTTC TAT GACACGCTCTCA TTGTGTTATTCCTTG HQ3559A 2941502 - 2941236 - | sulfatase (fragment) HQ3561A 2942073 - 2942231 + | hypothetical protein TERM 1473 2942494 - 2942475 - T 85 -13.6 -3.04792 | TGAGCAGGCGCAATA CCACGACC TTCA GGTCGTGG ATACGCGCCGTCACG TERM 1474 2942620 - 2942590 - T 78 -5.5 -4.86822 | gap 1, overlap 2942611 AATCACATAATAAAA CAGGAATCGGT-TG GAAA CAGAGCGATTCCCG CCAGTCCTACGATGG HQ3563A 2943845 - 2943543 - | hypothetical protein HQ3564A 2944773 - 2944252 - | hypothetical protein TERM 1475 2944344 - 2944330 - G 84 -12.8 -3.16564 | opp_overlap 2944323 GTCGTAGGGGACGAA CGGGCG CTT CGCCCG GCCAGCCTGTTCGAA HQ3565A 2945406 - 2945924 + | hypothetical protein TERM 1476 2946018 - 2946040 + F 87 -11.4 -4.01137 | opp_overlap 2946022, overlap 2946019 TTGAACCTCTGTGAA TCCATTCTCA CGG TGAGAATGGG TTTGTAAGTTCTGTC TERM 1477 2946019 - 2946039 + F 80 -12.7 -2.99959 | opp_overlap 2946022, overlap 2946018 TGAACCTCTGTGAAT CCATTCTCA CGG TGAGAATGG GTTTGTAAGTTCTGT HQ3567A 2946474 - 2946704 + | hypothetical protein HQ3568A 2946701 - 2947120 + | hypothetical protein TERM 1478 2947116 - 2947097 - f 72 -9.2 -3.56273 | TCTACGAGGAGAGAA TTCCGCCG TTTA CGGCGGGA GTGACTCCGACAACT HQ3570A 2948673 - 2949035 + | hypothetical protein HQ3571A 2949036 - 2949548 + | hypothetical protein HQ3572A 2949657 - 2949863 + | hypothetical protein HQ3573A 2949989 - 2950939 + | hypothetical protein HQ3574A 2952386 - 2951139 - | IS1341-type transposase TERM 1479 2951213 - 2951243 + g 74 -11 -3.05765 | opp_overlap 2951239 CGTCTACTGGTGCGT CTCCGCTCCCCGAC GTG GGCGAGGAACGGAG TCTATGTCTCCGCTT TERM 1480 2951660 - 2951679 + g 82 -12.1 -3.14125 | overlap 2951648 2951658 GAAGCAGGGCGTTGT GCGCGGC TTGCGT GCCGCGC TGTTGCATCTCTCCA TERM 1481 2952339 - 2952356 + g 71 -9.1 -3.53091 | opp_overlap 2952350 GAGTGCGTCGCGTTG CTCGTCG GAAA CGGCGAG TTTCACGACGGCGGT HQ3575A 2953392 - 2952820 - | hypothetical protein HQ3576A 2954060 - 2953590 - | hypothetical protein HQ3577A 2954585 - 2954073 - | hypothetical protein TERM 1482 2954323 - 2954347 + g 76 -10.7 -3.21276 | opp_overlap 2954323 2954327 2954329, overlap 2954321 2954327 GCGCAGGCGAGGACA GCAACATCGGC ATC GCTGAGGTTGC TATTATCCAGGAGGC HQ3578A 2954876 - 2954586 - | hypothetical protein HQ3579D 2955485 - 2955868 + | hypothetical protein HQ3580A 2955953 - 2956285 + | hypothetical protein TERM 1483 2956693 - 2956677 - g 73 -8.7 -3.88291 | GACGATTCTCACAAA CGACGAA TCC TTCGCCG AGCTGGAGCCAGCAG HQ3581A 2956282 - 2956749 + | hypothetical protein HQ3582A 2956849 - 2957205 + | hypothetical protein TERM 1484 2957416 - 2957430 + G 70 -10 -3.09823 | ACTGTCATCCATCGT GTGCTC GTT GAGCAC TATCCTTTTCGGACA HQ3583A 2957215 - 2957544 + | hypothetical protein TERM 1485 2957627 - 2957652 + F 87 -11.1 -3.91897 | gap 1 GGTGCTAGCGGGGTC GGGGGACGGCCG AGA CGGCC-TCGCCC TTTCTAAGTCCACCA TERM 1486 2957840 - 2957819 - g 76 -11.6 -2.83403 | opp_overlap 2957809, overlap 2957818 TGTCGTCGAGGAAAT CCGCGATG TTGGAG CATCGCGG TGTCGGGCGCGTGAG HQ3584A 2957787 - 2958746 + | hypothetical protein HQ3586A 2960109 - 2959597 - | integrase (PhiCh1 Int1-like) HQ3587A 2960628 - 2960191 - | hypothetical protein abrB 2960921 - 2960625 - | transcription regulator TERM 1487 2961065 - 2961039 - H 90 -10.8 -4.36914 | overlap 2961058 GCGGCTCTTAGAAAA GCCCCCGGTGGT TGC AACACCGGAGAC CGTGCTGGTCAAACC HQ3589A 2961046 - 2961561 + | hypothetical protein TERM 1488 2962363 - 2962343 - f 83 -14 -2.72661 | opp_overlap 2962334 2962334 CAGTATCGTGAAGTA CCTCGGGG TCAAG CCCCGAGG CTTCACCGTTTGGGG TERM 1489 2965220 - 2965202 - g 72 -6 -4.38712 | CCGAGTTTGAGAAAA TCGATAAC TCA GTTGTCGA GAAACTCGAGAGAGA repH 2963680 - 2966670 + | plasmid replication protein repH HQ3591A 2967047 - 2966814 - | hypothetical protein HQ3592A 2968110 - 2967421 - | hypothetical protein HQ3593A 2968256 - 2969407 + | hypothetical protein HQ3594A 2969852 - 2971177 + | hypothetical protein TERM 1490 2971193 - 2971212 + T 83 -9.2 -4.2704 | opp_overlap 2971181 ACATCGCTCCCCTCA CGGCGAGA AGCG TCCCGCCG TTTATTGGTCCTCGG HQ3595A 2971393 - 2971214 - | hypothetical protein TERM 1491 2971955 - 2971943 - H 70 -4.7 -4.45083 | opp_overlap 2971947 2971951, overlap 2971899 2971898 2971944 2971945 GCGACACGGACAAAA CGGTG AAG CCCCG GGGCTCGTCCCCGAG HQ3596A 2972992 - 2974422 + | hypothetical protein HQ3597A 2975098 - 2975631 + | hypothetical protein HQ3598A 2975624 - 2976130 + | hypothetical protein HQ3599A 2976864 - 2976478 - | hypothetical protein HQ3600A 2977220 - 2978434 + | chitinase domain-containing protein cbp 2981278 - 2978786 - | cell surface calcium-binding acidic-repeat-containing protein TERM 1492 2982148 - 2982173 + H 72 -4.9 -4.55826 | gap 1, opp_overlap 2982148, overlap 2982151 TTATCTCGTTACATA GT-GTTCGAATT TGG AATTCGAATGAC TTTTCCTATTTTAAC TERM 1493 2982482 - 2982498 + H 84 -5.1 -5.42265 | overlap 2982485 CCCCGCAGTAACACT TGAGGCA TTC TGCCTGA TTTTTTGTAATTTGG bcp 2982954 - 2983259 + | peroxiredoxin HQ3603A 2983833 - 2983381 - | hypothetical protein HQ3604A 2984576 - 2983830 - | hypothetical protein TERM 1494 2984109 - 2984097 - G 73 -5.5 -4.64598 | GAACGACTCGAAAAA CGCCT CCC AAGCG TCGACGTCCTCCTCA HQ3605A 2984756 - 2986183 + | hypothetical protein HQ3606A 2986224 - 2986913 + | hypothetical protein HQ3607A 2986906 - 2987283 + | hypothetical protein HQ3610A 2988443 - 2988694 + | hypothetical protein TERM 1495 2989039 - 2989027 - f 76 -9.1 -3.70902 | TGGCGTATATGCAAA CCGAG GGG CTCGG CTACCTGTATGCGTT HQ3614A 2990225 - 2990407 + | hypothetical protein urtE 2991267 - 2990569 - | ABC-type urea transport systems, ATP-binding protein II urtD 2992037 - 2991264 - | ABC-type urea transport system, ATP-binding protein I urtC 2993224 - 2992034 - | ABC-type urea transport system, permease protein II TERM 1496 2992646 - 2992634 - G 83 -6.3 -4.87052 | CACAAACCAATAAAA TTCAG ATC CTGAA AGACTGAATGAACTC urtB 2994147 - 2993221 - | ABC-type urea transport system, permease protein I urtA 2995472 - 2994180 - | ABC-type urea transport systems,substrate-binding protein TERM 1497 2995885 - 2995870 - R 77 -3.3 -5.1101 | TGATCATGTAAAAAA TCGAA CAGTCT TTCGA CGTATCTCTTACCGA nikR 2996806 - 2996267 - | transcriptional regulator cbiM1 2996866 - 2997522 + | ABC-type cobalt transport system, permease protein cbiM2 2997519 - 2997824 + | ABC-type cobalt transport system, permease protein cbiQ 2997821 - 2998633 + | ABC-type cobalt transport system, permease protein cbiO 2998621 - 2999421 + | ABC-type cobalt transport system, ATP binding protein TERM 1498 2999533 - 2999547 + F 72 -6.4 -4.35644 | overlap 2999530 2999545 2999546 GTTTATTATCATCAG GTCTCG GCG TGAGAC TTCTTTTATGCTCAT ureB 2999779 - 3000159 + | urease subunit beta ureC 3000156 - 3001868 + | urease subunit alpha ureA 3001865 - 3002191 + | urease subunit gamma ureG 3002191 - 3002811 + | urease accessory protein ureD 3002808 - 3003722 + | urease accessory protein ureE 3003722 - 3004483 + | urease accessory protein UreE TERM 1499 3004743 - 3004718 - g 76 -11.9 -2.91274 | overlap 3004723 GTGATTGTAACGAGA TGCAAGCCGCT GATG AGCGGCTTGGA GCGGCAACACTGCCG TERM 1500 3004738 - 3004723 - g 73 -10.4 -3.16267 | overlap 3004718 TGTAACGAGATGCAA GCCGCT GATG AGCGGC TTGGAGCGGCAACAC TERM 1501 3004960 - 3004974 + G 79 -11.4 -3.19091 | GCATCCGGTCTTGAA TGCCGC GAA GCGGCA TTAGTGAGTGCATAT ureF 3004483 - 3005205 + | urease accessory protein TERM 1502 3005417 - 3005392 - f 95 -12.7 -4.2354 | overlap 3005382 3005383 3005389 GAAAGGGGAAAAGAA TCCTTCCCATG ATAT CATGAGAAGGA GGGGGAAATGCTGTC HQ3632A 3006515 - 3006754 + | insertion element protein (ISH2) HQ3633A 3007953 - 3007237 - | hypothetical protein HQ3634A 3010325 - 3008148 - | cationic amino acids transporter/stress response protein TERM 1503 3008450 - 3008461 + g 81 -5.8 -4.88918 | opp_overlap 3008450 CAGCGGGATACCAAA GCGA AATA TCGC TTTTATTTGCAGTAG TERM 1504 3008929 - 3008946 + g 71 -4.1 -4.72272 | CTAATCAATGACTGC TCCCGAT CTGA ATCGAGA TTTTTCGTGAGCGCA trkA 3010735 - 3010322 - | TrkA-potassium uptake domain-containing protein arsC 3012525 - 3012082 - | arsenate reductase (glutaredoxin); protein-tyrosine-phosphatase TERM 1505 3012316 - 3012291 - G 76 -11.1 -3.17075 | opp_overlap 3012291 TTTCCTCGAACGTAA TCTCCCGTGGC GTCC GCCCCGAGAGA TCGATTCCGACTACG TERM 1506 3012337 - 3012375 + g 74 -10.8 -3.0263 | TCCGACTACGCGCAT AGCTCGGACGACCTCGTC GTG GACGTGGTCGGCAGGGCG TGTTCCGCCAGTGAT HQ3637A 3013297 - 3013106 - | hypothetical protein TERM 1507 3014748 - 3014760 + G 75 -5.5 -4.66938 | CCGTCGGTCATCTTC TCGGG CTT TCCGA TTTTGTCTTCGGCAT HQ3639A 3014225 - 3015232 + | hypothetical protein HQ3640A 3016395 - 3015883 - | phosphoesterase,metallo-phosphoesterase-calcineu rin-like pepB 3016636 - 3017724 + | leucyl aminopeptidase TERM 1508 3017858 - 3017838 - T 75 -6.1 -4.4458 | opp_overlap 3017839, overlap 3017839 3017840 3017852 TATATATAGAATAAA TCGAGCGTT TCA AACGCTCAT CATATGATGCACGGT TERM 1509 3017857 - 3017839 - T 71 -9.6 -3.25664 | opp_overlap 3017839, overlap 3017838 3017840 3017852 ATATATAGAATAAAT CGAGCGTT TCA AACGCTCA TCATATGATGCACGG TERM 1510 3017856 - 3017840 - T 73 -10.9 -2.54314 | opp_overlap 3017839, overlap 3017839 3017838 3017852 TATATAGAATAAATC GAGCGTT TCA AACGCTC ATCATATGATGCACG lrp 3018374 - 3017916 - | AsnC family transcriptional regulator glnA 3018502 - 3019878 + | glutamate--ammonia ligase HQ3644A 3020968 - 3020024 - | PAP2 family phosphatase HQ3645A 3021578 - 3020976 - | hypothetical protein TERM 1511 3021120 - 3021106 - G 81 -3.6 -5.44721 | ATTAGCGCAAAAAAA TCATCT AAA AGATAA AATGCAGCAATCGTC TERM 1512 3021141 - 3021123 - G 74 -3.8 -4.90471 | ATCTAAAAGATAAAA TGCAGCAA TCG TCGTTGCA GTTCCATACAATAAG TERM 1513 3021202 - 3021222 + g 75 -5.5 -4.71418 | overlap 3021192 3021204 CCGCGTCGAAGTTGC TTTCGAATA TAT TGTTCGAGA TTTGTTTTGAGTGTT trm1 3022870 - 3021713 - | N(2),N(2)-dimethylguanosine tRNA methyltransferase TERM 1514 3021752 - 3021764 + g 71 -6.3 -4.21607 | CGCCGAACGGATTTC TGCAA TAG TTGCA TTTGTCTTGAATGCC HQ3647A 3023062 - 3023802 + | hypothetical protein adh 3023838 - 3024881 + | alcohol dehydrogenase, NAD dependent HQ3649A 3026435 - 3027448 + | hypothetical protein TERM 1515 3027878 - 3027888 + G 81 -3.2 -5.40072 | AACCCACATGAGCGG TCGG TTG CTGA TTTTTTTGACGGACA prsA 3027506 - 3028378 + | ribose-phosphate pyrophosphokinase hit 3028540 - 3028974 + | histidine triad (HIT) hydrolase minD 3029901 - 3029134 - | cell division inhibitor HQ3653A 3030920 - 3030402 - | hypothetical protein tfbA 3031084 - 3032028 + | transcription initiation factor TFB fbp 3032547 - 3032047 - | fructose-2,6-bisphosphatase minD 3034012 - 3033302 - | cell division inhibitor MinD-like (ATPase involved in chromosome partitioning) HQ3657A 3034977 - 3034015 - | hypothetical protein HQ3658A 3036411 - 3035356 - | hypothetical protein HQ3659A 3036746 - 3036408 - | hypothetical protein HQ3660A 3037347 - 3037054 - | hypothetical protein csg 3039338 - 3037722 - | cell surface glycoprotein precursor TERM 1516 3039493 - 3039471 - R 74 -5.4 -4.55798 | overlap 3039475 TATTCTAAACGAAAA GCAGCGCGTG TTT CCCGCCCTAC CGTGGGCGGGGTGAA mcm 3046548 - 3039898 - | ATP-dependent DNA helicase (intein-containing) TERM 1517 3043295 - 3043265 - G 74 -11.2 -2.78495 | overlap 3043262 3043260 TCATCACGAACAGCA GCCGCAGTATTGTG TGT CACAATACCACCGC CAATAAAGTTCTGCG HQ3663A 3047301 - 3046648 - | hypothetical protein TERM 1518 3047209 - 3047221 + g 83 -9.1 -4.32034 | ATCACTGTCGATGAG CGACC CAC GGTCG TTTTGCTGCTCGTCG bioY 3047438 - 3048019 + | biotin synthesis protein cbiO 3048044 - 3048760 + | cobalt ABC transporter ATP-binding protein cbiQ 3048818 - 3049531 + | cobalt ABC transporter permease ferB 3049985 - 3049665 - | ferredoxin II guaA 3050872 - 3050135 - | guanosine monophosphate synthetase (glutamine-hydrolyzing) (GMP synthase) est 3051828 - 3051037 - | 3-oxoadipate enol-lactonase alaS 3054884 - 3052113 - | alanyl-tRNA synthetase TERM 1519 3054274 - 3054256 - G 71 -6.6 -4.20712 | TATAATACTTCAAAA GCGGGACC AGC GTTCCCAC CGCCGACCCATGGAT TERM 1520 3055184 - 3055156 - R 73 -10.3 -2.97021 | overlap 3055151 TGTGCAAAGACCAGA TCCCACTCACTGA GTA TCAGCGAGTGAGG CTAAAAGTGCTTCAA rfcA 3057111 - 3055162 - | replication factor C small subunit I TERM 1521 3056167 - 3056177 + g 73 -3.2 -4.99861 | ACCACTTGAGAGATA CGAC TGA GTTG TTTTTGTCGTTGATG HQ3672A 3057561 - 3058169 + | acetyltransferase pmm 3059535 - 3058162 - | phosphohexomutase (phosphoglucomutase; phosphomannomutase) HQ3674A 3059730 - 3060032 + | hypothetical protein HQ3675A 3060351 - 3060082 - | nuclease surE 3061316 - 3060465 - | acid phosphatase HQ3677A 3061656 - 3061507 - | hypothetical protein HQ3678A 3062164 - 3062331 + | hypothetical protein TERM 1522 3062477 - 3062458 - T 77 -10.7 -3.32946 | opp_overlap 3062457, overlap 3062456 GGGTCAAGGAGAATA CCTGCGG GTTCAG CCGCAGG ATGAATTCGACACCC TERM 1523 3062792 - 3062772 - T 75 -9.7 -3.53811 | opp_overlap 3062762 CCGAGTCCGTCGAAA TCTGCCGGA TTC TCCGGCACA ACCAACTCCGGGAGC rpiA 3063879 - 3063169 - | ribose-5-phosphate epimerase cdc6 3065190 - 3064066 - | cell division control protein 6 mutS3 3067413 - 3065299 - | DNA mismatch repair protein MutS homolog, MutS3 TERM 1524 3067754 - 3067736 - g 73 -10.2 -3.12606 | opp_overlap 3067734, overlap 3067718 TGAGACAGCACTCAA CCGCGCAG CAG CTGCTCGG GATTCGCTTGCGGAT TERM 1525 3068619 - 3068600 - g 79 -3.6 -5.29445 | CTCTAATAATAAAAA CACTGA ATCTTCTA TCAGTG CTATAGTTGAACCCT trmU 3067536 - 3068651 + | tRNA methyl transferase tatC1 3070048 - 3068696 - | sec-independent protein translocase component TatC1 TERM 1526 3070577 - 3070595 + H 76 -5.2 -4.77759 | TATTCTTGCCACATC GCTTGCAG GAA CTGAAGGC TTTTTAATCGGTTCT TERM 1527 3071200 - 3071188 - g 80 -4.7 -5.00884 | opp_overlap 3071189, overlap 3071189 3071190 ATTTCTTGCAAAAAA CGCTG TTG CTGCG GGATTCGCACCAACA tatC2 3070709 - 3072967 + | sec-independent protein translocase component TatC2 ftsJ 3074443 - 3073673 - | ribosomal RNA large subunit methyltransferase J TERM 1528 3074034 - 3074004 - G 78 -6.1 -4.77567 | overlap 3074023 ACCTTGACAATAAAA TCGCCACCGGC TGGAAGTAT GTCAGTGGCGA CTGAAAATGCCTGTC pcn 3074896 - 3075639 + | DNA polymerase sliding clamp HQ3687A 3076408 - 3075797 - | hypothetical protein priB 3076471 - 3077712 + | DNA primase large subunit HQ3689A 3077969 - 3077775 - | transporter hjc 3078586 - 3078122 - | Holliday junction resolvase HQ3691A 3079026 - 3078682 - | hypothetical protein mtfK1 3079214 - 3079696 + | FKBP-type peptidylprolyl isomerase 1 HQ3693A 3079950 - 3080060 + | hypothetical protein uvrC 3082012 - 3080255 - | excinuclease ABC chain C TERM 1529 3081456 - 3081440 - G 75 -3.7 -5.03314 | overlap 3081441 TTTACCTTCAAAAAA CTGAACC GCA GATTCAA CAGCAGACCGATACG nosF 3082333 - 3083340 + | ABC-type copper transport system, ATP-binding protein nosY 3083337 - 3084257 + | ABC-type copper transport system, permease protein ligA 3086588 - 3084276 - | DNA ligase (NAD) TERM 1530 3086804 - 3086774 - g 76 -8.2 -4.08767 | overlap 3086775 CTGATGGGTTCAAAA CCCGGAGCCTGC ATGCCGG GCAGGACCCGGA TGAGACAACAGGAGC metY 3086755 - 3088170 + | O-acetylhomoserine aminocarboxypropyltransferase (methionine synthase) metA 3088167 - 3089375 + | homoserine O-acetyltransferase TERM 1531 3089705 - 3089724 + G 71 -7.2 -4.10552 | gap 1 TGGACTTCTTGGGCT CG-CGATTG CAG CAATCGGCG TTTCATTTGCTCCAA HQ3701A 3089451 - 3090671 + | major facilitator superfamily transporter TERM 1532 3090999 - 3090963 - g 77 -4.4 -5.10208 | gap 2, opp_overlap 3090963 3090981 3090987, overlap 3090967 GAACTTGAACAAAAA GCAACTGCCTGTGCGAAG CGT CTCCGCGCA-GCAGA-GC GTGTTCTCGTTGCCT TERM 1533 3090996 - 3090967 - g 76 -9.3 -3.9407 | gap 1, opp_overlap 3090963 3090981 3090987, overlap 3090963 TTGAACAAAAAGCAA CTGCCTGTGCGAAG CGT CTCCGCGCA-GCAG AGCGTGTTCTCGTTG recJ 3090897 - 3092366 + | single-stranded-DNA-specific exonuclease HQ3703A 3092591 - 3092803 + | hypothetical protein HQ3704A 3092813 - 3094003 + | phosphate/sulfate permease HQ3705A 3095619 - 3094120 - | CBS domain-containing protein grx 3096052 - 3096360 + | glutaredoxin HQ3707A 3096360 - 3096875 + | peroxiredoxin-like protein HQ3708A 3096885 - 3097592 + | DNA binding protein; translation factor glyS 3098024 - 3099832 + | glycyl-tRNA synthetase TERM 1534 3100192 - 3100202 + G 73 -2.4 -5.10208 | AGCGGCTTTGCTTGA GACG GTT CGAC TTTTTATTGGGCTTG HQ3710A 3099842 - 3100669 + | homolog to dolichol kinase argG 3100982 - 3102175 + | argininosuccinate synthase argH 3102182 - 3103690 + | argininosuccinate lyase HQ3713A 3103925 - 3104089 + | Arg cluster protein TERM 1535 3104725 - 3104709 - g 73 -7.9 -4.13343 | opp_overlap 3104709 3104708, overlap 3104700 ACAAACGCTGCAAAA GGAGCAG AGA CAGCTCC CTTTAGTCTTGATGA argX 3104091 - 3104990 + | arginine biosynthesis regulator argC 3105008 - 3106048 + | N-acetyl-gamma-glutamyl-phosphate reductase argB 3106048 - 3107040 + | acetylglutamate kinase TERM 1536 3107394 - 3107383 - g 71 -4.4 -4.72272 | CGGGGCGATCAAAAA TCGT TGCA ACGA AGCGCGGATTCCACG TERM 1537 3107540 - 3107552 + G 75 -7.7 -4.15788 | opp_overlap 3107540 3107538 AGCCGTTGATGAAGA GACTG CAG CAGTC TTTCTTGAACCCGTT argD 3107037 - 3108176 + | acetylornithine aminotransferase TERM 1538 3108804 - 3108820 + G 72 -5.7 -4.41348 | overlap 3108810 GGTGGGATGGGATTA CTCTCGG ATA CCGCGGG TTTCTTTCGGGAACA argE 3108173 - 3109522 + | acetyl-lysine deacetylase argF 3109686 - 3110588 + | ornithine carbamoyltransferase TERM 1539 3110801 - 3110777 - g 75 -10.1 -3.35011 | overlap 3110775 3110771 ATATCCAAACCAACA TTCGGCAATGT CTG AGATTGCCGAA GCGCTTGATGAGCAA rad3b 3110715 - 3112910 + | DNA repair helicase-like protein cyc 3112950 - 3114311 + | unspecific monooxygenase (cytochrome P450) HQ3722A 3114849 - 3114298 - | hypothetical protein TERM 1540 3115468 - 3115445 - R 75 -6.6 -4.42513 | AAGCACAAAGAGAAA TCCCGGCGCC CTTC AGCGTCAGGA GGATGTCAATGCGCA TERM 1541 3115481 - 3115507 + r 72 -3 -4.9792 | opp_overlap 3115501 GGAGGATGTCAATGC GCAGTTCAAA AAAGTAA TTAGAGCTGC TTTTTATCTCAGCTC uspA 3115962 - 3115525 - | stress response protein HQ3724A 3117072 - 3115966 - | hypothetical protein uvrB 3119631 - 3117529 - | excinuclease ABC subunit B HQ3726A 3119967 - 3120260 + | hypothetical protein HQ3727A 3120989 - 3120330 - | hypothetical protein TERM 1542 3120571 - 3120558 - G 91 -6.7 -5.24531 | opp_overlap 3120558 ATTTCCGATAAAAAA GCCAA CCAT TTGGC TCACTTGCTCAATCG HQ3728A 3121197 - 3122732 + | flagella cluster protein ( integral membrane protein) cysA 3123726 - 3122821 - | thiosulfate sulfurtransferase TERM 1543 3123750 - 3123765 + H 82 -6 -5.15117 | overlap 3123752 CGTGTCCTGCCAATC CTCCGG TTAA CCGGTG TTTTTTGCCGTTTTA TERM 1544 3123752 - 3123763 + H 71 -7.2 -4.18259 | overlap 3123750 TGTCCTGCCAATCCT CCGG TTAA CCGG TGTTTTTTGCCGTTT cysA 3123942 - 3124886 + | thiosulfate sulfurtransferase TERM 1545 3125050 - 3125064 + T 70 -10 -3.10244 | AGGTGTTGTGTCTTC GGACTG TCC CAGTCC TCGTTTCTTGAAACC TERM 1546 3125787 - 3125803 + T 72 -8.7 -3.79906 | opp_overlap 3125790, overlap 3125790 TTTTCGAGAGTGAGA GGACGGT CTG ACCGTTC TTCTTGTCGAACTCG TERM 1547 3125790 - 3125800 + T 71 -6.8 -4.02817 | opp_overlap 3125790, overlap 3125787 TCGAGAGTGAGAGGA CGGT CTG ACCG TTCTTCTTGTCGAAC TERM 1548 3125957 - 3125995 + T 82 -11.1 -3.63627 | gap 2, opp_overlap 3125957 3125967 ACAGTGGTTACGACA CCGTGAAGTACCTCGGGGT CAA GCCCCGAGG--CTTCACCG TTTGGGGTCTGCACA TERM 1549 3125995 - 3125957 - T 72 -10.4 -2.78935 | gap 2, opp_overlap 3125957, overlap 3125967 ACAGTGGTTACGACA CCGTGAAGTACCTCGGGG TCAAG CCCCGAGG--CTTCACCG TTTGGGGTCTGCACA TERM 1550 3125987 - 3125967 - T 83 -14 -2.72991 | opp_overlap 3125957, overlap 3125957 CGACACCGTGAAGTA CCTCGGGG TCAAG CCCCGAGG CTTCACCGTTTGGGG HQ3732A 3126709 - 3126566 - | hypothetical protein HQ3733A 3127495 - 3126815 - | S-adenosylmethionine-dependent methyltransferase HQ3734A 3127680 - 3128258 + | hypothetical protein HQ3735A 3129248 - 3128451 - | hypothetical protein TERM 1551 3130028 - 3129985 - R 74 -10.3 -3.22102 | gap 1, overlap 3129983 3129986 3129988 ACATGGTCGAGAATA GGAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCAC-CC GCCCCCGCACCCGCC TERM 1552 3130028 - 3129986 - R 78 -12.7 -2.5294 | overlap 3129985 3129983 3129988 CATGGTCGAGAATAG GAGTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCACCC GCCCCCGCACCCGCC TERM 1553 3130026 - 3129988 - R 77 -11.7 -2.80074 | overlap 3129985 3129986 3129983 TGGTCGAGAATAGGA GTAGGAGTACCGGCGGC TTGGC ACCGCCAGCAGTCCCAC CCGCCCCCGCACCCG HQ3736A 3131127 - 3130180 - | hypothetical protein HQ3737A 3131622 - 3131221 - | hypothetical protein HQ3738A 3132269 - 3131628 - | GTP-binding protein SEQUENCE gi|109644367|ref|NC_008213.1| Haloquadratum walsbyi DSM 16790 plasmid PL47, complete sequence (length 46867) xerD 573 - 19 - | phage integrase/recombinase xerD HQ4002A 1475 - 825 - | hypothetical protein HQ4003A 2467 - 1721 - | hypothetical protein HQ4005A 3882 - 4634 + | hypothetical protein HQ4006A 4657 - 5145 + | hypothetical protein TERM 1 5266 - 5240 - T 74 -10.2 -3.22521 | TGGACATCAATCGAA GCTGACATACTG ACA CAGAATGTCAAC AGCACGATATATTCC csg 6845 - 5442 - | cell surface glycoprotein precursor TERM 2 6972 - 6986 + r 72 -2.8 -4.93877 | GTTATCATCTATTTA CGCA CTTTTGC TGCG TTTTATTTGATGGAA HQ4008A 7550 - 7266 - | hypothetical protein HQ4009A 7918 - 7652 - | hypothetical protein HQ4010A 8398 - 8799 + | hypothetical protein HQ4011A 9163 - 9540 + | hypothetical protein HQ4012A 10716 - 11063 + | hypothetical protein TERM 3 12152 - 12140 - g 75 -7.7 -4.18197 | opp_overlap 12148 AGGGGGGACGCAAAA GAACG GTT CGTTC AGGTACAACTTGACC HQ4014A 11561 - 15187 + | type II restriction enzyme, methylase subunits hepA 18888 - 15205 - | SNF2 family DNA/RNA helicase HQ4016A 19005 - 19424 + | hypothetical protein HQ4017A 19652 - 19897 + | hypothetical protein HQ4018A 20701 - 21051 + | hypothetical protein rnhA 22255 - 21809 - | ribonuclease H I TERM 4 23203 - 23218 + H 72 -10.4 -2.87344 | TTGACTGACGGCACT CGCCGA CTCG TCGGCG TGTCTGAGGACGCTC TERM 5 25515 - 25500 - g 76 -9 -3.94067 | overlap 25494 GAGTACAGAGAACAA TCGCTC TTCA GAGCGA CAAGAGAGTACAGAG HQ4021A 25483 - 25974 + | hypothetical protein TERM 6 26968 - 26986 + T 77 -11 -3.21872 | opp_overlap 26966 26970, overlap 26975 CGTTCCCAGCTAACC CACGTCTG AGA CGGACGTG TTCGATCTCTTTAGA HQ4022A 28982 - 27033 - | putative P4-specific DNA primase TERM 7 28945 - 28968 + g 72 -10.2 -2.9914 | opp_overlap 28940 28939 CGGAGACAACGGTCG GGTGGTCGTG TCCA CGCGTCCACC TCTATCTGCAACATC TERM 8 29514 - 29530 + r 72 -5.1 -4.6902 | opp_overlap 29512 29514 TTTCTTGATATAATA TTGTACG TCA CGCACAA TTTTTCACATTATCA TERM 9 30480 - 30460 - R 100 -8.3 -5.46706 | ATTGTAAAACAAAAA TCCCGTTAA GAC TGAACGGGA CATCATAGATCACAT HQ4023A 31970 - 30771 - | phage-like primase HQ4024A 32574 - 31951 - | hypothetical protein TERM 10 32072 - 32099 + g 76 -7 -4.41548 | gap 1, overlap 32073 AATAGCGTCCATTGC TCGGCTGAGTCTG CCT CCGACTCA-CCGG TTTTGTGAGCTCTGA HQ4025A 34212 - 33412 - | hypothetical protein TERM 11 34632 - 34620 - g 76 -9.1 -3.90744 | opp_overlap 34617 34620 GTCGGTGGGAAAGAA GCCGT CGA ACGGC TCGTGTATGAAACTG parA 34341 - 35285 + | ParA domain-containing protein TERM 12 35567 - 35557 - g 71 -4.6 -4.4891 | opp_overlap 35557, overlap 35546 TTCAGGATTACAAAA CCCG TCT CGGA GTGCTCTTATCCGAC HQ4027A 35282 - 35674 + | hypothetical protein HQ4028A 36264 - 37232 + | hypothetical protein HQ4029A 37321 - 37560 + | hypothetical protein HQ4030A 38307 - 37855 - | hypothetical protein TERM 13 38301 - 38316 + g 82 -5.4 -5.06414 | overlap 38293 38300 TCCGCGAGAGAGTCG GGGACA CACC TGTTCC TTTTTATTGAACGAA HQ4031A 38640 - 39353 + | hypothetical protein TERM 14 39375 - 39390 + G 83 -4 -5.45652 | GATCCAGCAGATGGA CTCAAG ACAA TTTGAG TTTTTTATTGCAGAT mrr 39370 - 40359 + | restriction system mrr-like protein HQ4033A 40414 - 41106 + | membrane associated restriction endonuclease (mrr-tye) HQ4034A 41337 - 42260 + | hypothetical protein HQ4035A 42846 - 43169 + | hypothetical protein HQ4036A 43346 - 43900 + | hypothetical protein tnpR 44249 - 44905 + | resolvase HQ4038A 45107 - 45775 + | SCP-like extracellular protein HQ4039A 46357 - 46851 + | hypothetical protein