TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.316342 %AT, 2394275 nt, 17886 terms. Intergenic: 0.352545 %AT, H2T: 184488 nt, 1290 terms; T2T: 71505 nt, 944 terms; H2H: 83405 nt, 1320 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|121996810|ref|NC_008789.1| Halorhodospira halophila SL1, complete genome (length 2678452) Hhal_0001 664 - 35 - | methyltransferase GidB TERM 1 604 - 584 - G 79 -11.1 -4.07124 | opp_overlap 587 GAGCAGGGACAGAAA GCCCTCGAG GCG CTCCAGGGC CGGGGCGTCGAGTTC Hhal_0002 2555 - 654 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2 2729 - 2762 + G 71 -9.5 -3.76224 | opp_overlap 2729 2727, overlap 2710 CCTGCCGCGCAAAGA GGCGCGGCGGATGGA TCCG TTCATCCACTACGCC TTTGGTGCCTGCGCC Hhal_0003 2616 - 3773 + | beta-ketoacyl synthase TERM 3 4143 - 4124 - g 77 -15 -3.24365 | opp_overlap 4111 4110, overlap 4122 TGACACTGCACAATA CTCCGGCG ATTC CGCCGGAG CGCTGGCAGGGGGTT Hhal_0004 3787 - 4653 + | aminotransferase, class IV TERM 4 5133 - 5147 + G 75 -5.6 -4.56597 | overlap 5132 GGGCTCGAGGCGTCT CACCCC GAG GGGATG TTTTTCCCGACCACC Hhal_0005 4692 - 5675 + | aminodeoxychorismate lyase Hhal_0006 5672 - 6319 + | dTMP kinase TERM 5 7212 - 7239 + G 71 -10.6 -3.70773 | gap 1, opp_overlap 7200, overlap 7210 7213 GCAGCTGGTCCGCGA AGCCTCGGTGGAG GCG CTCCACC-AGGCG TTCTTGCGTATCGGC Hhal_0007 6316 - 7371 + | DNA polymerase III, delta prime subunit Hhal_0008 8477 - 7347 - | aminotransferase, class V TERM 6 7442 - 7417 - G 78 -6.8 -4.56597 | overlap 7428 GCTGTGTTGTAAAAA TGTGGCGAGA AGCGGA TCCCGCCGCA GCGCGAGGCACACGC Hhal_0009 9485 - 8712 - | short-chain dehydrogenase/reductase SDR Hhal_0010 10555 - 9578 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 7 10021 - 9983 - G 71 -11.6 -3.58037 | CAGCAACTCGTCAAA CGGGACCCGGCCCACC CGGCAGC GATGGGCCGAGGGCCG CTCGGCCAGCCATAC Hhal_0011 10658 - 11284 + | molybdopterin-guanine dinucleotide biosynthesis protein B Hhal_0012 11435 - 13339 + | AMP-dependent synthetase and ligase Hhal_0013 14152 - 13400 - | hypothetical protein Hhal_0014 14225 - 15424 + | TraB family protein Hhal_0015 16992 - 15439 - | peptide chain release factor 3 Hhal_0016 17214 - 17708 + | hypothetical protein TERM 8 17738 - 17756 + F 100 -17.4 -5.75342 | CACGGGAGCGCTCCC CCCGGCCC TGC GGGCCGGG TTTTTTTTGCCCGGG Hhal_0017 17877 - 18401 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Hhal_0018 18440 - 19657 + | beta-ketoacyl synthase Hhal_0019 19722 - 21116 + | oxygen-independent coproporphyrinogen III oxidase Hhal_0020 21085 - 22296 + | hypothetical protein Hhal_0021 23281 - 22730 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Hhal_0022 25132 - 23291 - | excinuclease ABC, C subunit Hhal_0023 25990 - 25340 - | two component LuxR family transcriptional regulator Hhal_0024 26080 - 26922 + | pyrimidine reductase, riboflavin biosynthesis, RibD Hhal_0025 28355 - 26958 - | fumarate lyase TERM 9 27131 - 27177 + g 73 -12.8 -3.47227 | opp_overlap 27122, overlap 27132 AACCGATGACCGCAT TCAGAGCGGTGACCAGGATCGG GTT CCGATCCAGGGCAGCGCGCAGG TTCTCCTCGTTGACG Hhal_0026 28460 - 29827 + | adenylosuccinate lyase Hhal_0027 30540 - 29899 - | NUDIX hydrolase rumA 31862 - 30558 - | 23S rRNA 5-methyluridine methyltransferase Hhal_0029 32643 - 31870 - | hypothetical protein Hhal_0030 33042 - 32662 - | holo-acyl-carrier-protein synthase Hhal_0031 33773 - 33039 - | pyridoxal phosphate biosynthetic protein PdxJ Hhal_0032 34501 - 33797 - | DNA repair protein RecO TERM 10 34274 - 34236 - G 75 -4.5 -4.65895 | gap 2, overlap 34237 TCCGCCATGTAAAAA CCGCACGCCAGCGCCCCGC CCC GCAGGGCG-TAAC-CGCGT CCTGCCTGATCGACG Hhal_0033 35415 - 34498 - | GTP-binding protein Era Hhal_0034 36112 - 35408 - | ribonuclease III TERM 11 35473 - 35520 + g 73 -7.4 -4.23213 | CCAGCATCGCCTCGG CGGCCCGCTGCTCGGCCTGC CTGCGGCT GCCGGCCTCGCCGAGGGTCG TTTGTTCGCTGTCGC TERM 12 35795 - 35811 + g 78 -9.3 -4.27316 | opp_overlap 35764 GGCAAGGATGGAGTC GCGCCGG TGG CCGCCGC TTTTGAGTTCGCCGC Hhal_0035 36878 - 36117 - | signal peptidase I Hhal_0036 38687 - 36888 - | GTP-binding protein LepA TERM 13 38064 - 38054 - G 79 -4.6 -4.72272 | overlap 38055 GCTCGCCATCAAAAA CCCG GGC CAGG CAGACCACACCCAGG TERM 14 38753 - 38732 - R 100 -15.1 -5.95166 | opp_overlap 38743 38745 TCCAACGAAAAAAAA CGCCGCCCG CGCA CGGGCAGCG CCCGTATTCTACGCG Hhal_0037 40248 - 38779 - | protease Do Hhal_0038 41302 - 40313 - | sigma E regulatory protein, MucB/RseB Hhal_0039 41969 - 41289 - | anti sigma-E protein, RseA Hhal_0040 42583 - 41999 - | RNA polymerase sigma factor RpoE TERM 15 43600 - 43627 + G 72 -14 -3.21276 | overlap 43598 43601 TCATGCACCGGTTCG ACGCGCGCGGCG AACT CGCCCCGCGCGA TATTGTCGCCCGGGC TERM 16 43601 - 43626 + G 77 -17.5 -2.52623 | overlap 43600 43598 CATGCACCGGTTCGA CGCGCGCGGCG AACT CGCCCCGCGCG ATATTGTCGCCCGGG Hhal_0041 42714 - 44405 + | L-aspartate oxidase Hhal_0042 45058 - 44798 - | hypothetical protein sdhB 45864 - 45076 - | succinate dehydrogenase iron-sulfur subunit sdhA 47674 - 45884 - | succinate dehydrogenase flavoprotein subunit Hhal_0045 48065 - 47682 - | succinate dehydrogenase, cytochrome b subunit Hhal_0046 48457 - 48068 - | succinate dehydrogenase, cytochrome b subunit TERM 17 48585 - 48572 - H 79 -6.7 -4.58786 | ATTAACAAGAAGAAA TGCTG ACGC CAGCA GAAGATTAACGATCC TERM 18 48714 - 48702 - H 72 -6.9 -4.21773 | CGGGAAGAGAAACAA GCCCC GAG GAGGC CCAATGCCCCAAGAG TERM 19 49666 - 49619 - g 83 -15.7 -3.57263 | gap 3, opp_overlap 49640 AGGCGCAGCTGGAAA CCGCCCCGCTGAGCGCCGACGGCC AGC GGC--TCCG-GCTCAGCGAGGCGG GAGCCTGAACCCGCG Hhal_0047 48718 - 49674 + | glycine cleavage T protein (aminomethyl transferase) Hhal_0048 51174 - 49687 - | lysyl-tRNA synthetase Hhal_0049 52085 - 51210 - | peptide chain release factor 2 Hhal_0050 52475 - 53740 + | adenosylhomocysteinase Hhal_0051 53839 - 54336 + | hypothetical protein TERM 20 54312 - 54363 + T 100 -33.8 -2.91274 | gap 1, opp_overlap 54339 54341 GCAGCGGCTGATCGC GGACCAC-CGCGGCGGCGCCGGCTG AAA CAGCCGGCGCCGCCGCGCGCCGTCC TCTACTTACCCTCCC Hhal_0052 57076 - 54365 - | AMP-dependent synthetase and ligase Hhal_0053 57173 - 61033 + | FAD linked oxidase domain-containing protein Hhal_0054 61061 - 61396 + | hypothetical protein Hhal_0055 61435 - 62016 + | NnrU family protein Hhal_0056 63517 - 62060 - | Fmu (Sun) domain-containing protein Hhal_0057 63692 - 66202 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Hhal_0058 67236 - 66163 - | diguanylate phosphodiesterase TERM 21 66429 - 66386 - G 81 -13.1 -3.91911 | opp_overlap 66387, overlap 66387 TCGATCTTAACGAAA TCCGGCTCCAGGTCCTTGA GCAAGT TCAGGGACCCGTAGCCGGC ACCGAGATCGTCCAG TERM 22 66428 - 66387 - G 75 -16.6 -2.94825 | opp_overlap 66387, overlap 66386 CGATCTTAACGAAAT CCGGCTCCAGGTCCTTGA GCAAGT TCAGGGACCCGTAGCCGG CACCGAGATCGTCCA TERM 23 67271 - 67307 + H 75 -8 -4.30576 | gap 1, opp_overlap 67288, overlap 67272 GACCGCAGAGGCTCC TCACTGCGGCG-GGC AAAGCCCC GCCGTGCCGCAGTGC TTTTGATCCTCAGCG Hhal_0059 67406 - 70006 + | phosphoenolpyruvate synthase Hhal_0060 71352 - 70003 - | glutamate dehydrogenase TERM 24 71521 - 71486 - R 82 -6 -4.7254 | gap 1, overlap 71490 AGTCTGCACTAAAAA CGGACCCGTGTGCACCA TCC CGGTGC-CACGGCGGCG GCCTCCGTGCGGCAT Hhal_0061 72604 - 72023 - | RnfA-Nqr electron transport subunit Hhal_0062 73253 - 72594 - | electron transport complex, RnfABCDGE type, E subunit Hhal_0063 73945 - 73253 - | FMN-binding domain-containing protein TERM 25 73507 - 73484 - G 70 -8.8 -3.87373 | GATACTGCCCAGAAA GTCCGGATCG GTCT CGATCCGATC TCCCAGACCCGGGGT Hhal_0064 74961 - 73945 - | electron transport complex, RnfABCDGE type, D subunit TERM 26 74918 - 74875 - G 93 -18.2 -3.64755 | gap 1, opp_overlap 74898 74899, overlap 74865 ACACACCGGCAACAA CGCCAG-CACCACCGAGCGCA TGA TGCGCTCGACGCTGTCCGGCG CCTTGATGTGTGGCG Hhal_0065 76307 - 74961 - | electron transport complex, RnfABCDGE type, C subunit Hhal_0066 81277 - 76310 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 27 76499 - 76489 - G 71 -2.4 -4.65895 | CGTCGTAGGCAAAAA CCCC GGG GGCG ATGTCGATGCAGTCG Hhal_0067 82301 - 81420 - | Fe-S cluster domain-containing protein TERM 28 81775 - 81791 + g 71 -3 -4.59773 | gap 1, opp_overlap 81775, overlap 81775 81776 CAGATTTCGACGCAA T-CACCG CAGC CGGTGCA TTTTTCGGCATCCAC TERM 29 82390 - 82414 + H 100 -6.4 -5.252 | TTACCCTTATAGAGG CCGGCAGG TCAAATCCC CCTGCTGG TTTTTTCTCGGCCTG TERM 30 84065 - 84108 + G 79 -10.8 -4.07568 | gap 1 GAACTGACCCTGATC GTGGCCCGCCGCC-CCTGCCC GCT GGCCAGCCGGCGCCTGGCCGC TTTTCAGGCCGAGCA Hhal_0068 82544 - 84139 + | indolepyruvate ferredoxin oxidoreductase Hhal_0069 84136 - 84681 + | pyruvate ferredoxin/flavodoxin oxidoreductase Hhal_0070 84693 - 86030 + | phenylacetate--CoA ligase Hhal_0071 86033 - 86470 + | amino acid-binding ACT domain-containing protein Hhal_0072 87513 - 86491 - | molybdenum cofactor biosynthesis protein A Hhal_0073 88062 - 87562 - | disulphide bond formation protein DsbB Hhal_0074 88297 - 88644 + | alkylhydroperoxidase TERM 31 88698 - 88734 + F 77 -12.9 -3.36694 | opp_overlap 88696 88694, overlap 88697 CCCATCAAAACCACG CCGTACGGTAGGGTTGG GCC CGCGCCCCACCGTACGG TCTTTCGGAGTGCAT Hhal_0075 88759 - 89415 + | rhodanese domain-containing protein Hhal_0076 89863 - 89423 - | choline/carnitine/betaine transporter Hhal_0077 91500 - 89860 - | choline/carnitine/betaine transporter TERM 32 90671 - 90644 - G 72 -5.5 -4.46514 | gap 1, overlap 90647 90648 ACGGATTCAAAGAAA CCAGCCAGCACC AGCCG GGT-CGGGCCGG CAATGAGCACGAACA Hhal_0078 93020 - 91497 - | glycerol kinase Hhal_0079 93202 - 94839 + | FAD dependent oxidoreductase Hhal_0080 95159 - 94836 - | hypothetical protein Hhal_0081 95949 - 95269 - | phosphate uptake regulator, PhoU TERM 33 95469 - 95496 + g 71 -9.8 -3.75024 | gap 1, opp_overlap 95452, overlap 95468 GCCGCTGGATCTCCC GC-GCCTGATCCC GCC GGGCTCGGGCCGC TTCTTGCTGATCCGG Hhal_0082 97173 - 95971 - | Na+/Pi-cotransporter TERM 34 97108 - 97157 + g 78 -8.4 -4.3208 | opp_overlap 97089, overlap 97110 GCGCAGCCAGGCCGG CACCTCCCGCTGCCGGACCG CTGCCGAGTC CGCCCCGGCAGCGGAGGCTG TTTTGCCTTGTGCCA Hhal_0083 97759 - 97322 - | hypothetical protein Hhal_0084 97972 - 99594 + | hypothetical protein Hhal_0085 99698 - 100210 + | periplasmic protein thiol--disulphide oxidoreductase DsbE Hhal_0086 101337 - 100258 - | anthranilate phosphoribosyltransferase Hhal_0087 102353 - 101376 - | alcohol dehydrogenase Hhal_0088 103454 - 102396 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase TERM 35 103290 - 103277 - G 81 -9.5 -4.25104 | overlap 103250 CGGCGCGCACCAAAA CGGCG GCAG CGCCG CTGCGGCGCAACTCG Hhal_0089 104891 - 103596 - | hypothetical protein Hhal_0090 105086 - 105304 + | hypothetical protein Hhal_0091 105624 - 106055 + | protein tyrosine phosphatase Hhal_0092 106850 - 106110 - | phosphate uptake regulator, PhoU Hhal_0093 107716 - 106862 - | phosphate ABC transporter, ATPase subunit Hhal_0094 109406 - 107730 - | phosphate ABC transporter, inner membrane subunit PstA Hhal_0095 111753 - 109426 - | binding-protein-dependent transport systems inner membrane component TERM 36 109759 - 109705 - G 70 -12.7 -3.30441 | gap 1, overlap 109707 109708 CATGACCGCCGAGAA GATGCCCGGGCTGGCGGTGAGCA-GG ACCA CCGTGGCCACCGCCTGCCAGGGCGTA GCGCCCAGGGCCAGC TERM 37 109757 - 109707 - G 77 -15.3 -3.21924 | gap 1, overlap 109705 109708 TGACCGCCGAGAAGA TGCCCGGGCTGGCGGTGAGCA-GG ACCA CCGTGGCCACCGCCTGCCAGGGCG TAGCGCCCAGGGCCA TERM 38 109756 - 109708 - G 79 -18.8 -2.5294 | gap 1, overlap 109707 109705 GACCGCCGAGAAGAT GCCCGGGCTGGCGGTGAGCA-GG ACCA CCGTGGCCACCGCCTGCCAGGGC GTAGCGCCCAGGGCC TERM 39 111886 - 111862 - R 100 -20 -3.91911 | opp_overlap 111856 111854, overlap 111851 111836 CCCACCGGAACGAAA GCGGGCCGGC TCAGG GCCGGCCCGC AAACAGGCTTCGTGG TERM 40 111931 - 111909 - R 73 -14.2 -2.82623 | overlap 111906 CTTCGTGGATAAGGA TTCGGAGCGC GCA ACGCTCCGAA GAAGTCACACCAACC Hhal_0096 112913 - 111948 - | phosphate binding protein Hhal_0097 114321 - 112981 - | PAS/PAC sensor signal transduction histidine kinase TERM 41 113418 - 113470 + g 74 -13.4 -3.25823 | gap 1, opp_overlap 113435 GTTCGATCCGGTGTT GGTGCTCCCCGGATAGAGTCTGCGC CTCG GCGCAGAC-CTCCTCGAGCAGCACC TTCATATCCACCGGA Hhal_0098 115032 - 114343 - | two component transcriptional regulator Hhal_0100 116586 - 117209 + | hypothetical protein Hhal_0101 117288 - 117758 + | redoxin domain-containing protein Hhal_0102 118836 - 117829 - | putative periplasmic protease Hhal_0103 119563 - 118949 - | hypothetical protein Hhal_0104 120005 - 121528 + | sporulation domain-containing protein Hhal_0105 121602 - 122657 + | hypothetical protein Hhal_0106 122644 - 122913 + | hypothetical protein Hhal_0107 124695 - 123316 - | cysteinyl-tRNA synthetase Hhal_0108 126128 - 124695 - | glutamyl-tRNA synthetase Hhal_0109 126243 - 126971 + | UDP-2,3-diacylglucosamine hydrolase Hhal_0110 127983 - 126997 - | tRNA-dihydrouridine synthase A Hhal_0111 128081 - 128335 + | glutaredoxin 2 TERM 42 128545 - 128520 - g 75 -8.9 -4.11216 | TGCGCATTTTGAAAA CCCTGCCGTGG GCCG CTACGGCACGG CGGAAACCCGTCGGC TERM 43 128680 - 128664 - g 70 -3.5 -4.4009 | overlap 128665 CCCGAGCCTAGAAAA CGCCCGC AAG GCCCGCG ATGCCGGGACGATCA TERM 44 128741 - 128762 + G 73 -12.9 -3.53091 | ACTTCGCCCGGCTGG GCCGCCCCC CTCA GGGGACGGC TTTGGGCGGCCACAT Hhal_0112 128332 - 128919 + | ErfK/YbiS/YcfS/YnhG Hhal_0113 128975 - 129274 + | hypothetical protein TERM 45 129357 - 129303 - T 100 -20.2 -2.85351 | opp_overlap 129314 129317 129321, overlap 129321 CGGGGCGACACTAGA CG-CCCGGCATACCAGAAAGCCCGGC CCTGC GCCGGGCTTTCTCGTTT-CCGGGACG ACGCCACCTCCCGCT TERM 46 129314 - 129346 + T 93 -17.8 -3.53012 | opp_overlap 129303 129321, overlap 129317 129321 TAGACGCCCGGCATA CCAGAAAGCCCGGC CCTGC GCCGGGCTTTCTCG TTTCCGGGACGACGC TERM 47 129317 - 129343 + T 89 -18.1 -2.90496 | opp_overlap 129303 129321, overlap 129314 129321 ACGCCCGGCATACCA GAAAGCCCGGC CCTGC GCCGGGCTTTC TCGTTTCCGGGACGA TERM 48 129339 - 129321 - T 89 -13.1 -4.0162 | opp_overlap 129317 129314 129321, overlap 129303 CCGGCATACCAGAAA GCCCGGC CCTGC GCCGGGC TTTCTCGTTTCCGGG TERM 49 129321 - 129339 + T 89 -13.1 -4.13654 | opp_overlap 129321 129303, overlap 129317 129314 CCGGCATACCAGAAA GCCCGGC CCTGC GCCGGGC TTTCTCGTTTCCGGG Hhal_0114 130438 - 129371 - | ErfK/YbiS/YcfS/YnhG family protein TERM 50 130402 - 130379 - G 70 -12.4 -3.2819 | overlap 130391 130392 ACCGAACACCAGTAA CACAGCCCCA AACG TGGGGCCGCG CCAACGCGCCACGCC Hhal_0115 131044 - 130439 - | NUDIX hydrolase Hhal_0116 132056 - 131052 - | lipoyl synthase Hhal_0117 132233 - 133363 + | hypothetical protein TERM 51 133409 - 133378 - T 88 -17.2 -3.07935 | ACCGCAGGGATCGAA TCGGCGACCGGGCC ACAC GGCCCGGTCGCCCC GATCGGATCAAAGGG Hhal_0118 133725 - 133417 - | hypothetical protein Hhal_0119 134795 - 133944 - | alpha/beta hydrolase fold TERM 52 136837 - 136801 - g 70 -15.1 -2.78463 | opp_overlap 136806 ACCTCGCCGAGCAGA TGGACGTCGTGGACCCC CAG GCGATCCACGACGCCCG CCAGCGGGTCCGGGC TERM 53 137256 - 137273 + G 76 -14.1 -3.53012 | opp_overlap 137244 137249 AACCCAAACCGGGCC CGCGCCC TACT GGGCGCG TTTGCCCAGGGCAAC Hhal_0120 134820 - 137531 + | aminopeptidase N TERM 54 138641 - 138616 - g 74 -12.5 -3.61398 | overlap 138634 CCTGGTCCGCAACAA GGTCGACCTGG AAGA CCAGGCCGCCC GTAAGGAGGTCATCG Hhal_0121 137582 - 139702 + | carboxyl-terminal protease Hhal_0122 141481 - 139745 - | single-stranded-DNA-specific exonuclease RecJ Hhal_0123 142427 - 141474 - | hypothetical protein Hhal_0124 143611 - 142472 - | threonine synthase Hhal_0125 144927 - 143617 - | homoserine dehydrogenase TERM 55 144790 - 144838 + g 80 -16 -3.16564 | gap 2 GCGCGGCCGCTCCGG GTGGCGCGCCGAGGCGTGGGTAAC GCG GAT-CTCACGCC-CGGCGCGCCGG TTGATCACATCGGCG Hhal_0126 146181 - 144979 - | aminotransferase Hhal_0128 148508 - 146598 - | diguanylate cyclase Hhal_0127 146282 - 146653 + | hypothetical protein Hhal_0129 149290 - 148505 - | MazG family protein Hhal_0130 149377 - 150015 + | TetR family transcriptional regulator Hhal_0131 150675 - 150049 - | glutathione S-transferase domain-containing protein TERM 56 150720 - 150696 - H 81 -11.3 -4.18018 | opp_overlap 150700, overlap 150697 CTCCCTGATTGAAAA TGCCTCGCCGG AGG CCGCCGAGGCC TGGCGATATCCTAGA TERM 57 150719 - 150697 - H 80 -14.8 -3.10597 | opp_overlap 150700, overlap 150696 TCCCTGATTGAAAAT GCCTCGCCGG AGG CCGCCGAGGC CTGGCGATATCCTAG ispG 150784 - 152025 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Hhal_0133 152621 - 152091 - | BadM/Rrf2 family transcriptional regulator Hhal_0134 153535 - 152720 - | phosphomethylpyrimidine kinase Hhal_0135 155133 - 153532 - | AMP-dependent synthetase and ligase Hhal_0136 156084 - 155167 - | beta-lactamase domain-containing protein TERM 58 155519 - 155474 - G 74 -12.4 -3.56643 | gap 1 GCGATATGGGCCAAA CTCCGTCGCCACCGCTCGGGG GCGAA CTCCG-GCGGTGGTGCCGGGG GAACCACCACCCCGG TERM 59 156016 - 156002 - G 79 -7 -4.4767 | overlap 156004 TGACGGATCAGAAAA CTGGCG ATA CGCCCG GGCTTGCCCTGGAAG Hhal_0137 156150 - 157310 + | glucose sorbosone dehydrogenase Hhal_0138 157319 - 159250 + | ABC transporter related Hhal_0139 159437 - 159943 + | hypothetical protein Hhal_0140 161173 - 159974 - | iron-containing alcohol dehydrogenase TERM 60 160604 - 160559 - G 73 -7.6 -4.15106 | overlap 160590 CAGCAATTGCGAAAA GGCGTCCATCCCCGCACT-GGC AACC ACCGAACGCGGC-ACGGACGCC GTCAGCCGCGCATCG Hhal_0141 161933 - 161178 - | hypothetical protein TERM 61 162560 - 162588 + G 70 -14.6 -2.71011 | gap 1 ATCGATACGGCCCAG TCGGCCTACGCGC GCCT GCGCG-AGGCCGG TGCTTGCGAGGCACT TERM 62 162989 - 162957 - g 70 -15.6 -2.70932 | gap 1 TGCCGGCGCTAACCA CGGTGAGCGAGCCGG TGCG CCGGTTCGC-CACCG CCCTGCGCGGCTGGT Hhal_0142 162134 - 164398 + | hypothetical protein Hhal_0143 164431 - 164772 + | heat shock protein DnaJ domain-containing protein Hhal_0144 164772 - 165428 + | GrpE protein Hhal_0145 165425 - 167158 + | heat shock protein 70 Hhal_0146 167158 - 167415 + | hypothetical protein Hhal_0147 171034 - 167453 - | peptidase S41 Hhal_0148 171723 - 171127 - | cytochrome b561 Hhal_0149 173387 - 171720 - | cytochrome c family protein Hhal_0150 174319 - 173471 - | phosphotransferase domain-containing protein Hhal_0151 176103 - 174316 - | ABC transporter related TERM 63 175912 - 175893 - G 73 -12.1 -3.52906 | overlap 175891 CCAGCGGCACAAACA GCGCGGC CTCGGT GCCGCGC ACCTCGTCGAGGTGA Hhal_0152 176256 - 176696 + | glyoxalase/bleomycin resistance protein/dioxygenase Hhal_0153 176702 - 178519 + | GTP-binding protein TypA Hhal_0154 180465 - 178516 - | hypothetical protein Hhal_0155 182525 - 180465 - | Rhs element Vgr protein Hhal_0156 183484 - 182522 - | hypothetical protein Hhal_0157 185166 - 183469 - | hypothetical protein TERM 64 184452 - 184442 - G 78 -6.8 -4.55295 | CGGGCCAGAAAGAAA CACC GCA GGTG GCTCAGCGCTGGCGC Hhal_0158 185581 - 185144 - | hypothetical protein TERM 65 185596 - 185626 + r 91 -16.8 -3.54424 | CGTTGCACCTCCACG GGCGGGCCAGGG CAGCGAC CCCCGGCCCGCC TTTCGGCCGGTCACC Hhal_0159 186122 - 185637 - | hypothetical protein Hhal_0160 187671 - 186157 - | hypothetical protein Hhal_0161 188277 - 187675 - | hypothetical protein Hhal_0162 189783 - 188287 - | ImpA domain-containing protein Hhal_0163 193223 - 189780 - | hypothetical protein TERM 66 189825 - 189857 + g 78 -16.3 -3.05384 | opp_overlap 189819, overlap 189827 189829 CAGACGGAAGCGGGA CAGATCCCCCCACTG CAG CAGTGGGGTGCTCTG TTCGGTGCGCAGGAG Hhal_0164 193933 - 193220 - | hypothetical protein Hhal_0165 195282 - 193930 - | hypothetical protein Hhal_0166 195907 - 195284 - | hypothetical protein TERM 67 196382 - 196394 + G 79 -4.8 -4.72272 | opp_overlap 196382 AAGCTGGACCAACGA GCTG GCGGA CAGC TTTTTGCTCGAAGAG Hhal_0167 196185 - 197807 + | methyl-accepting chemotaxis sensory transducer TERM 68 197875 - 197903 + T 100 -23.1 -3.66178 | opp_overlap 197875 GCGCACCATCAAAAA GGGCCGGCCCCGC CAC GCGGGACCGGCCC TTTCAGCTTCCGGCC TERM 69 197903 - 197875 - T 100 -25.3 -4.77036 | opp_overlap 197875 GCGCACCATCAAAAA GGGCCGGCCCCGC CAC GCGGGACCGGCCC TTTCAGCTTCCGGCC Hhal_0168 198410 - 197937 - | peptidylprolyl isomerase, FKBP-type Hhal_0169 199803 - 198430 - | hypothetical protein Hhal_0170 200174 - 199803 - | hypothetical protein Hhal_0171 200898 - 200224 - | haloacid dehalogenase, type II Hhal_0172 201045 - 201860 + | TatD-related deoxyribonuclease Hhal_0173 204328 - 201857 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 70 203282 - 203271 - G 73 -7.2 -4.15044 | overlap 203249 203272 TCCTCGCTGAAGAAA CCCG CCTC CGGG GCGTAAACGGCCAGG Hhal_0174 205019 - 204366 - | hypothetical protein TERM 71 204908 - 204936 + g 78 -10.1 -4.11216 | GATCAGGGCCCAGCA CCGGCAGCCGGAC GCC GTCCCGCGGCCCG TTTTCCGCCTGCGCC Hhal_0175 205841 - 205149 - | peptidase, membrane zinc metallopeptidase, putative TERM 72 205945 - 205960 + H 70 -5.4 -4.41494 | opp_overlap 205935 205933, overlap 205937 205930 TAACATTTGCTGCAG GACAGC ATAA GTTGTC TTTTGGTTAGCCATA Hhal_0176 206009 - 206407 + | hypothetical protein Hhal_0177 207256 - 206417 - | hypothetical protein TERM 73 207201 - 207160 - G 82 -17.2 -3.05384 | overlap 207164 207189 CGGCGGTGTAGCCAA GGAACGCCGCCGGCCGGC GCACCA GCAGACCGGCGGCCTCCC GGAGCCATCCCTGCC TERM 74 207197 - 207164 - G 70 -13 -3.37344 | overlap 207160 207189 GGTGTAGCCAAGGAA CGCCGCCGGCCGGC GCACCA GCAGACCGGCGGCC TCCCGGAGCCATCCC Hhal_0178 207764 - 207327 - | CBS domain-containing protein TERM 75 207724 - 207696 - G 75 -4.5 -4.59773 | GCGCATCTTGAAAAA GGCCTCCCG CACACCTTCAT CGGGATGCC CGGTGACCAGTTTAT TERM 76 207785 - 207829 + r 75 -13.7 -2.93723 | opp_overlap 207782 207785, overlap 207781 207787 CCCTCCTGATAAGCA TG-GCTGTAGCGGGTGCCGTC TCATC GACGGCACC-GCTGCGGCTCG TATCCTTGCTGGGCC TERM 77 207787 - 207826 + r 87 -18.7 -2.70936 | gap 1, opp_overlap 207785 207782, overlap 207785 207781 CTCCTGATAAGCATG GCTGTAGCGGGTGCCGTC TCATC GACGGCACC-GCTGCGGC TCGTATCCTTGCTGG Hhal_0179 209541 - 207844 - | dihydroxy-acid dehydratase Hhal_0180 209714 - 211375 + | AMP-dependent synthetase and ligase Hhal_0181 211675 - 213798 + | MscS mechanosensitive ion channel TERM 78 213836 - 213861 + T 100 -21.9 -5.26316 | opp_overlap 213836 GCGCACCACAAAAAA GGCCCGCCCCT CTGC AGGGGCGGGCC TTTTTTGTGGACTGC TERM 79 213861 - 213836 - T 100 -21.9 -5.31275 | opp_overlap 213836 GCGCACCACAAAAAA GGCCCGCCCCT CTGC AGGGGCGGGCC TTTTTTGTGGACTGC Hhal_0182 214527 - 213910 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 80 215021 - 215011 - g 72 -3.2 -4.62783 | GACCGAGGCCAAAAA GCAA CGC CTGC TCGACTCTCGGTTGA Hhal_0183 214772 - 215671 + | NAD-dependent epimerase/dehydratase TERM 81 215717 - 215673 - f 80 -12 -3.71649 | gap 1, opp_overlap 215679 215680, overlap 215667 TCCGCAAACGCTAAA GGCCGCGCTGCCTCCCGCCGG CGCC CCCGCTG-AGGCAGCGGCGCC GGTGGGTGGCCCATT TERM 82 215679 - 215730 + F 86 -14.8 -3.45634 | opp_overlap 215667 215673, overlap 215680 AACGCTAAAGGCCGC GCTGCCTCCCGCCGGCGCCCCCGC TGAG GCAGCGGCGCCGGTGGGTGGCCCA TTCCTTGCTTCCCCT TERM 83 215680 - 215729 + F 87 -18.3 -2.66899 | opp_overlap 215667 215673, overlap 215679 ACGCTAAAGGCCGCG CTGCCTCCCGCCGGCGCCCCCGC TGAG GCAGCGGCGCCGGTGGGTGGCCC ATTCCTTGCTTCCCC Hhal_0184 215784 - 216581 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Hhal_0185 216618 - 217307 + | molybdate ABC transporter, inner membrane subunit Hhal_0186 217307 - 218374 + | molybdate ABC transporter, ATPase subunit TERM 84 218752 - 218787 + G 85 -16.8 -3.61715 | opp_overlap 218751 TTCGACCTTGAACAG CGCACCTCCCTGGGCG AACG CGCCTACGGCGGTGCG TTCTTCCAGACCGTC TERM 85 220128 - 220095 - g 71 -3 -4.58395 | gap 1, overlap 220096 220097 TGCACGGGGCAAAAA CCGCCCCGGGAAGGC GTCCA GCCT-CCTGGCGCAA CGGCTTCAGCTAGGC Hhal_0187 218449 - 220656 + | flavodoxin/nitric oxide synthase Hhal_0188 220661 - 221539 + | putative methyltransferase Hhal_0189 222626 - 221550 - | membrane-bound metal-dependent hydrolase TERM 86 222579 - 222549 - G 95 -14.7 -4.18018 | gap 1, overlap 222550 TTCGCGGAGGGAAAA GCGTGGCGCCCCGC AGTC GCGCGGCGCCAC-C ACCCGGTTGATCAGT TERM 87 222579 - 222550 - G 74 -14.9 -3.10597 | overlap 222549 TCGCGGAGGGAAAAG CGTGGCGCCCCGC AGTC GCGCGGCGCCACC ACCCGGTTGATCAGT Hhal_0190 222667 - 223953 + | hypothetical protein Hhal_0191 225614 - 224118 - | methyl-accepting chemotaxis sensory transducer TERM 88 224624 - 224610 - G 77 -11.4 -3.85539 | overlap 224613 CACATCCAGACGAAA GACGCC GAT GGCGTC CAGGGCCCCGGCGCT TERM 89 227173 - 227157 - g 71 -2.9 -4.56597 | GGCGCCCCCGAAAAA GCGCCTT GCG AAGGAAC CTCCCGGGCCGCAGC Hhal_0192 225912 - 227201 + | diguanylate phosphodiesterase Hhal_0193 228087 - 227239 - | hypothetical protein TERM 90 227498 - 227459 - G 73 -12 -3.53091 | gap 1, opp_overlap 227459 AGTGTCTCGCGGAAA CGGCCGTAGGCCTCCAGCG GGT CGCTGG-GCCGCTCGGCCG TCTGCTCATCGACCC TERM 91 227610 - 227584 - G 71 -10.1 -3.75506 | gap 1, opp_overlap 227604, overlap 227581 ATAATCCACCAACAA CGCCGCCT-CGC GCCG GCGCAGGGGGCG CCCCTGTTCGACCAC Hhal_0194 228370 - 228209 - | hypothetical protein Hhal_0195 228501 - 228740 + | hypothetical protein Hhal_0196 229109 - 229525 + | hypothetical protein Hhal_0197 229587 - 230675 + | bile acid:sodium symporter Hhal_0198 231311 - 230799 - | ankyrin Hhal_0199 231697 - 231341 - | dinitrogenase iron-molybdenum cofactor biosynthesis Hhal_0200 231938 - 232915 + | hypothetical protein Hhal_0201 232912 - 233673 + | binding-protein-dependent transport systems inner membrane component Hhal_0202 233666 - 234445 + | ABC transporter related Hhal_0203 235046 - 234618 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Hhal_0204 235394 - 235050 - | anti-sigma-factor antagonist Hhal_0205 236607 - 235420 - | response regulator receiver protein Hhal_0206 236704 - 237741 + | TPR repeat-containing protein Hhal_0207 237764 - 240154 + | TPR repeat-containing protein Hhal_0208 240199 - 241893 + | cellulose synthase (UDP-forming) TERM 92 242780 - 242756 - g 74 -14.3 -3.29144 | CGACGGGGGCGACAA GGCGGCCTG GATCGAG CAGGCCGCC GCGTCCGCCGTGGCC Hhal_0209 241890 - 242945 + | endoglucanase Hhal_0210 242935 - 243765 + | hypothetical protein Hhal_0211 244814 - 243786 - | dihydroorotate oxidase Hhal_0212 244916 - 246103 + | lytic murein transglycosylase Hhal_0213 246467 - 246111 - | glutaredoxin TERM 93 246829 - 246788 - g 86 -18.7 -3.12351 | gap 1, overlap 246757 TCGGTGCAGACCGAA GCCGACGG-CCGCAGCCCCC AGG AGGTGCTGCGGGCCACCGGC GCCGTCGCCCACGAG Hhal_0214 246563 - 248647 + | polyphosphate kinase Hhal_0215 250197 - 248668 - | Ppx/GppA phosphatase Hhal_0216 250709 - 250197 - | putative phosphohistidine phosphatase, SixA TERM 94 250444 - 250486 + g 100 -22 -3.53012 | opp_overlap 250433, overlap 250445 250447 AACACCGCCGCCGGG TCGCCGCCCGGGGCGAGC GCCGCCA GCTCGCGCCGGGCGGTGG TTTCGGGAAAGGCGG TERM 95 250445 - 250485 + g 95 -23.3 -2.71712 | opp_overlap 250433, overlap 250444 250447 ACACCGCCGCCGGGT CGCCGCCCGGGGCGAGC GCCGCCA GCTCGCGCCGGGCGGTG GTTTCGGGAAAGGCG TERM 96 250447 - 250483 + g 89 -22.3 -2.90496 | opp_overlap 250433, overlap 250445 250444 ACCGCCGCCGGGTCG CCGCCCGGGGCGAGC GCCGCCA GCTCGCGCCGGGCGG TGGTTTCGGGAAAGG Hhal_0217 251203 - 250727 - | BadM/Rrf2 family transcriptional regulator Hhal_0218 251736 - 251263 - | hypothetical protein Hhal_0219 252588 - 251767 - | hypothetical protein TERM 97 252816 - 252773 - g 83 -8.8 -4.58395 | opp_overlap 252762, overlap 252775 GGTAGGCGGCAAAAA CGCCTCCCTTGGCGAGAT GATCAGCA ACCTCGCCAAGGCGGGTG TCCGTGTCCCGGGCG Hhal_0220 252705 - 255077 + | phosphoenolpyruvate synthase TERM 98 255131 - 255086 - f 77 -13.1 -3.37464 | opp_overlap 255092, overlap 255078 255079 GCAGTAAGCGCACAA GCCCGCGCGGTTCAGGGGGCG GGGG CGCCCCCTGAACCGCTTTTCC TGCTGTCACCCGCCC TERM 99 255092 - 255125 + F 100 -28.3 -4.33274 | opp_overlap 255078 255079 255086 AGCGCACAAGCCCGC GCGGTTCAGGGGGCG GGGG CGCCCCCTGAACCGC TTTTCCTGCTGTCAC TERM 100 255200 - 255153 - f 81 -7.9 -4.57073 | gap 3 CACCCGCCCGAAAAA CGGCTACGCTGA-C-CGAAGGAGT TCT AC-CCTTCGAGGTCAGCATGACCG ATACCCGCGCCCCCT Hhal_0221 255194 - 256699 + | FAD linked oxidase domain-containing protein glcE 256699 - 257787 + | glycolate oxidase FAD binding subunit glcF 257794 - 258999 + | glycolate oxidase iron-sulfur subunit Hhal_0224 259837 - 259019 - | rhodanese domain-containing protein TERM 101 259581 - 259561 - G 71 -11.8 -3.55444 | GGTCCAGCGTCCAAA GCAGGCGG CTCGC CCGCCCGC CGCCGTCGGAGTCGT Hhal_0225 260407 - 259856 - | oligoribonuclease Hhal_0226 261507 - 260467 - | OmpA/MotB domain-containing protein TERM 102 261231 - 261212 - G 72 -6.4 -4.36914 | gap 1 TCGGTGGGGATAAAA CCGCCC-TG ACC CATGGGCAG CCCGCTGAGATCAAT Hhal_0227 262395 - 261523 - | putative chemotaxis (motility protein A) transmembrane Hhal_0228 262531 - 264024 + | putative signal transduction protein Hhal_0229 264387 - 264043 - | histidine triad (HIT) protein Hhal_0230 265018 - 264413 - | recombination protein RecR TERM 103 264784 - 264817 + g 77 -14.6 -3.18264 | gap 1, opp_overlap 264775, overlap 264785 ACAGCAGCGTCCGGC G-GCGCTGCGGACTG GCGCA CAGCCCGCAGCGCTC TTCCTCCGTGAGCAG TERM 104 264785 - 264815 + g 86 -18.3 -3.1552 | opp_overlap 264775, overlap 264784 CAGCAGCGTCCGGCG GCGCTGCGGACTG GCGCA CAGCCCGCAGCGC TCTTCCTCCGTGAGC Hhal_0231 265352 - 265029 - | hypothetical protein Hhal_0232 267041 - 265377 - | DNA polymerase III, subunits gamma and tau TERM 105 265586 - 265623 + g 74 -11.1 -3.68302 | opp_overlap 265581 TCTCACCGAAGGCCT CGCCGAGGGCCGTCTGC AGCC GCTCACGCCGCTCGGCG TTGTTCAGGTATTCG TERM 106 267358 - 267381 + H 75 -4.4 -4.63527 | opp_overlap 267339 267338 CCGGGCGATCGGCCC GTCCTCCCGG ACGG CCGGCAAGGC TTTTTAACATGCTGA Hhal_0233 267589 - 268788 + | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 107 268863 - 268832 - g 70 -9.4 -3.95022 | gap 1, opp_overlap 268832, overlap 268825 TCGAGGAACACGAAA CCA-TCGGCCCGCTG GAC CAGGCGGCCGAGTGG TTCAGTGAGAACATC TERM 108 269838 - 269880 + G 83 -15.6 -3.67597 | gap 1, overlap 269839 GAGCTTCGGCGAGCG TCAGCGCGGCAAGG-GCCG CGACTA CGGCGCCCTGCTGCGCTGG TTCTTCGGTCAAAAG TERM 109 269839 - 269879 + G 74 -16.9 -2.80344 | gap 1, overlap 269838 AGCTTCGGCGAGCGT CAGCGCGGCAAGG-GCCG CGACTA CGGCGCCCTGCTGCGCTG GTTCTTCGGTCAAAA TERM 110 269942 - 269895 - g 75 -10.4 -4.07568 | gap 1 GTTCTTCGGTCAAAA GCGCGACCCGGCGCAACAGCCCC AGC AGGGCTGA-GCGCCCAACCGCCC GGCGGGTGCCCGACG Hhal_0234 268798 - 269928 + | binding-protein-dependent transport systems inner membrane component Hhal_0235 270005 - 270865 + | substrate-binding region of ABC-type glycine betaine transport system TERM 111 270883 - 270913 + F 78 -16.1 -2.71924 | gap 1, overlap 270883 GCCCTCCGGCCCCCA CGCC-GGGCCCGGC CCTT GCCGGGCCCGGGCC GTTTGGGCAACACTG TERM 112 270883 - 270914 + F 90 -15.9 -3.53444 | gap 2, overlap 270883 GCCCTCCGGCCCCCA CG-CC-GGGCCCGGC CCTT GCCGGGCCCGGGCCG TTTGGGCAACACTGA Hhal_0236 270988 - 272064 + | hypothetical protein TERM 113 272095 - 272128 + F 100 -20.3 -3.53563 | opp_overlap 272084, overlap 272097 GAAGCCATGTAGCCA CTGCAAGGGCGCGGC CTCG GTCGCGCCCTTGCTG TTTGGGGGCCAATGT TERM 114 272097 - 272126 + F 100 -21.5 -3.34517 | opp_overlap 272084, overlap 272095 AGCCATGTAGCCACT GCAAGGGCGCGGC CTCG GTCGCGCCCTTGC TGTTTGGGGGCCAAT TERM 115 272203 - 272145 - f 77 -15.4 -2.52464 | gap 3 TTGGGGGCCAATGTA CGAGGCCGTGTTGAGGGGGGCCGA-CCCC GCAT GGGGCTCGGCCC-CCTCAACACG-CAGCT GCTCAACCGAATTGA Hhal_0237 272309 - 273961 + | choline/carnitine/betaine transporter TERM 116 273990 - 274018 + F 100 -23.9 -4.72272 | opp_overlap 273955 CGGGCGCCCGCAACC GCCCCCGGTACCC TGT GGGTGCCGGGGGC TTTTTCGTCCCCCCC Hhal_0238 274064 - 275353 + | hypothetical protein Hhal_0239 276217 - 275384 - | ABC transporter Hhal_0240 277155 - 276220 - | ABC transporter related Hhal_0241 277851 - 277231 - | molybdopterin-guanine dinucleotide biosynthesis protein A Hhal_0242 279124 - 277859 - | molybdenum cofactor synthesis domain-containing protein TERM 117 278255 - 278210 - G 71 -11.8 -3.63515 | gap 3, overlap 278212 CGGCAGCCCGAAGAA GAGCGCCGGGCCGA-CGC-GGCC GAA GGCCAGGGGCCGGCCCGG-GCGC ATGGCCACCCGCCAG TERM 118 278255 - 278212 - G 82 -15.3 -3.39784 | gap 3, overlap 278210 GCAGCCCGAAGAAGA GCG-CCGGGCCGA-CGC-GGCC GAA GGCCAGGGGCCGGCCCGGGCGC ATGGCCACCCGCCAG Hhal_0243 280216 - 279182 - | succinylglutamate desuccinylase/aspartoacylase Hhal_0244 281124 - 280216 - | alpha-L-glutamate ligase Hhal_0245 281606 - 281142 - | hypothetical protein Hhal_0246 282396 - 281599 - | hypothetical protein Hhal_0247 282550 - 283068 + | hypothetical protein Hhal_0248 284405 - 283065 - | hypothetical protein TERM 119 284289 - 284237 - G 70 -15.3 -2.78384 | overlap 284275 CCGGCGCGTAGTAGA GGGTGCGGCCGTCGTTGGCCACGGG GCC CTCGAGGACACCGTCGGCCACATCC CGGTGGTGCGCCCAC Hhal_0249 285498 - 284395 - | hypothetical protein Hhal_0250 286456 - 285488 - | hypothetical protein TERM 120 285750 - 285692 - G 71 -9.5 -3.75738 | gap 2, overlap 285689 285695 GAGGACCAGGAAGAA GACGGTCATCGGCAGCAGCCGCCGACCCA CCG CGGCCCAGCG-CTGCCGCCGGT-AGCGCC GGTGGTAACCGCTCG Hhal_0251 287516 - 286554 - | C4-dicarboxylate transporter/malic acid transport protein Hhal_0252 290243 - 287595 - | GCN5-related N-acetyltransferase Hhal_0253 290372 - 290632 + | phosphopantetheine-binding Hhal_0254 291378 - 290629 - | pseudouridine synthase TERM 121 291740 - 291702 - g 90 -20.2 -3.14344 | TACCCTGGCCATCAA GGCGCGGCGCCGGCGC GGCTGGT GGGCCGGCGCCGCGCT CACCCTGGTGGGCCT Hhal_0255 291460 - 292809 + | major facilitator transporter Hhal_0256 293879 - 292806 - | quinolinate synthetase Hhal_0257 294719 - 293913 - | molybdopterin binding domain-containing protein Hhal_0258 297838 - 294716 - | acriflavin resistance protein TERM 122 297806 - 297779 - G 80 -16.4 -3.21416 | gap 1 CAGCGCCAGCACCAA GTTGGCGG-CCAC CGG GTGGTCCGCCAAC CAGCGCAGCGCGTCT Hhal_0259 299080 - 297842 - | RND family efflux transporter MFP subunit Hhal_0260 300167 - 299187 - | hypothetical protein Hhal_0261 300941 - 300204 - | HAD family hydrolase TERM 123 300369 - 300333 - G 74 -13.5 -3.27994 | GTAACGGCAGATCAA CGCCGCCTGCATGCCGG CGG CCAGCGCCCCGGCGGCG TCGCTGTCCGGGTCA Hhal_0262 301669 - 300938 - | DNA polymerase III, epsilon subunit Hhal_0263 301899 - 303278 + | nitrogenase MoFe cofactor biosynthesis protein NifE Hhal_0264 303293 - 304669 + | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN Hhal_0265 304680 - 305165 + | dinitrogenase iron-molybdenum cofactor biosynthesis Hhal_0266 305196 - 305705 + | hypothetical protein Hhal_0267 306660 - 305740 - | UspA domain-containing protein Hhal_0268 306792 - 307160 + | hypothetical protein TERM 124 307212 - 307169 - T 100 -23.8 -3.66178 | overlap 307155 307171 GCGCTGAATCGCAAA GACCCCGCGGGACGGCGTCC CCCC AGCCGCCGCCCCGCGGGGTA TCCGGCCCGCCCTGC TERM 125 307210 - 307171 - T 100 -26.4 -3.41222 | overlap 307155 307169 GCTGAATCGCAAAGA CCCCGCGGGACGGCGTCC CCCC AGCCGCCGCCCCGCGGGG TATCCGGCCCGCCCT Hhal_0269 307517 - 307233 - | ferredoxin Hhal_0270 308320 - 307577 - | dinitrogenase iron-molybdenum cofactor biosynthesis Hhal_0271 308493 - 308299 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Hhal_0272 310097 - 308526 - | nitrogenase molybdenum-iron protein beta chain Hhal_0273 311654 - 310188 - | nitrogenase molybdenum-iron protein alpha chain Hhal_0274 312545 - 311670 - | nitrogenase iron protein TERM 126 312667 - 312637 - R 80 -15.4 -2.87344 | opp_overlap 312624 GAGGCTCGGGAGAGA CGCCTGCGGCGG CCGCGAC CCGCCGCAGGCC ACACCCAAGGGGCTG TERM 127 312749 - 312734 - R 86 -6.8 -4.8543 | gap 1, opp_overlap 312747, overlap 312736 312747 GAAGGCTCAGAAAAA CGG-GCC CAA GGCACCG CCGCGGGCGGCTTTC Hhal_0275 313334 - 312864 - | hypothetical protein Hhal_0276 314309 - 313428 - | hypothetical protein TERM 128 313733 - 313723 - G 70 -3.2 -4.40358 | overlap 313727 AGGTAGTCCACAAAA TCAG CGT CCGA GGCAACGAAGCTCGG Hhal_0277 315252 - 314287 - | NifZ family protein Hhal_0278 315587 - 315252 - | hypothetical protein Hhal_0279 316744 - 315599 - | homocitrate synthase Hhal_0280 317337 - 316744 - | NifQ family protein Hhal_0281 318389 - 317334 - | nitrogenase cofactor biosynthesis protein NifB Hhal_0282 320152 - 318575 - | transcriptional regulator NifA Hhal_0283 320527 - 321111 + | electron transport complex, RnfABCDGE type, A subunit Hhal_0284 321116 - 321661 + | electron transport complex, RnfABCDGE type, B subunit TERM 129 322580 - 322599 + G 70 -15 -2.70932 | CTTCGAGGCGCCCCT GGGCCTGC CCCT GCAGGCCC TGATTGAGCAAGCCG TERM 130 322636 - 322611 - g 80 -16.9 -3.18264 | gap 1, opp_overlap 322631 GCCCTGATTGAGCAA GCCGGCGGGCTC CGC GAGCCC-CCGGC CCGGGTGCTTGCCGG TERM 131 323104 - 323058 - g 75 -9.4 -4.18934 | gap 3, overlap 323028 323100 CAGGAGCGCAAGAAA GCGGCC-GCTGC--GGCCCGGCG CAAA CAGCGGGCCCAGCAGAAGGCCGC CAGCAGCGAGACCGA Hhal_0285 321651 - 323171 + | electron transport complex, RnfABCDGE type, C subunit TERM 132 323605 - 323629 + G 77 -11.3 -3.89822 | opp_overlap 323583 GGTCGAGCCCGCCCC CCTGGGCTCCG CCG TGGCGCCCGGG TTTCTCGAATCCCTG Hhal_0286 323168 - 324241 + | electron transport complex, RnfABCDGE type, D subunit Hhal_0287 324238 - 324906 + | electron transport complex, RnfABCDGE type, G subunit Hhal_0288 324899 - 325594 + | SoxR-reducing system protein RsxE Hhal_0289 325591 - 325908 + | hypothetical protein Hhal_0290 325905 - 326351 + | positive regulator of sigma E, RseC/MucC Hhal_0291 327097 - 326348 - | hypothetical protein Hhal_0292 328423 - 327197 - | hypothetical protein Hhal_0293 330373 - 328439 - | hypothetical protein Hhal_0294 331511 - 330420 - | hypothetical protein TERM 133 331570 - 331544 - R 86 -15.8 -3.28712 | overlap 331545 TCCGGTCGGTTAGAA GGCCGGGGCACT CAC AGCGCCCCGGCT CGGCTCCGGAACCCC TERM 134 331569 - 331545 - R 89 -19.3 -2.57132 | overlap 331544 CCGGTCGGTTAGAAG GCCGGGGCACT CAC AGCGCCCCGGC TCGGCTCCGGAACCC Hhal_0295 332186 - 331587 - | hypothetical protein Hhal_0296 333367 - 332258 - | hypothetical protein Hhal_0297 334531 - 333374 - | lytic transglycosylase, catalytic Hhal_0298 335410 - 334640 - | cyclic-AMP phosphodiesterase Hhal_0299 336217 - 335456 - | hypothetical protein Hhal_0300 336380 - 336574 + | hypothetical protein Hhal_0301 336617 - 338245 + | metal dependent phosphohydrolase TERM 135 338686 - 338721 + G 74 -11.8 -3.72027 | gap 1, overlap 338691 GGCGACCGGCACCTG GCCGAGCAGC-TGGCGC GCG GCGACGCGGTGCTCGGC TTCTTCCTGCACCGT Hhal_0302 338248 - 340260 + | putative Chase2 sensor protein Hhal_0303 340346 - 341707 + | tetratricopeptide TPR_4 TERM 136 342967 - 342994 + G 75 -8.4 -4.11216 | gap 1, overlap 342961 AGGCGGGTTGGTCTC GCGGCCTCCTTGG CGA CCAAGGTG-CTGC TTTTGAGGATGCGCG Hhal_0304 341697 - 343325 + | hypothetical protein Hhal_0305 343384 - 344136 + | 20S proteasome, A and B subunits Hhal_0306 345125 - 344088 - | hypothetical protein Hhal_0307 346061 - 345129 - | hypothetical protein TERM 137 345947 - 345996 + g 73 -16.6 -2.52623 | gap 2, overlap 345946 345942 AGTCGATGCGCACCG CGTGGGGCTGATCCAGCGCCAGGT GCGT ACC-GGTGCTG-ATCAGCCGCGCG GTATTCTCGGCCCGC Hhal_0308 347527 - 346061 - | hypothetical protein TERM 138 347463 - 347437 - G 78 -15.9 -3.06492 | gap 1, overlap 347440 GCAGGTACTCGAACA GCA-GCCGCGCC GCCG GGCGCGGCGTGC CGTCGGGGCGCAGCA TERM 139 347459 - 347440 - G 74 -16.4 -2.75074 | overlap 347437 GGTACTCGAACAGCA GCCGCGCC GCCG GGCGCGGC GTGCCGTCGGGGCGC Hhal_0309 348880 - 347588 - | arsenical pump membrane protein Hhal_0310 350562 - 349063 - | hypothetical protein Hhal_0311 352569 - 350650 - | PAS/PAC sensor hybrid histidine kinase Hhal_0312 352815 - 354179 + | diguanylate cyclase with PAS/PAC sensor TERM 140 354788 - 354766 - g 74 -12.6 -3.61715 | GACCGCCCTGAAGAA CGCCCTGCGC CAG GCGCCGGACG TGGTGCTCATCGGCG Hhal_0313 354191 - 355309 + | twitching motility protein Hhal_0314 357407 - 355452 - | hypothetical protein TERM 141 356286 - 356310 + g 95 -13.5 -4.27316 | GTAGGCCAGAATGGT CGTGCGTCCGG TCT CCGGACGCGGG TTTTGGCTTCGCCAC Hhal_0315 358048 - 357434 - | hypothetical protein TERM 142 359164 - 359192 + G 73 -16 -2.64616 | GCAGACCCTCGACCA CGCCCTGCAGCA GCTGG TGCAGCAGGGCG TGGTGTCAATGGAGG Hhal_0316 358211 - 359248 + | twitching motility protein Hhal_0317 360613 - 360125 - | hypothetical protein Hhal_0318 361151 - 360606 - | hypothetical protein TERM 143 360781 - 360766 - G 83 -4.6 -4.84359 | GCAGCGCCACAAAAA CGGTTC CAGA GATCCG CCGCAATCCCAATTC TERM 144 360850 - 360867 + g 75 -6.3 -4.44797 | gap 1 TTGTCTTTAATCCGA TGCGG-GT CGA ACACCGCA TTTTCGTCTTCGTCA Hhal_0319 361740 - 361141 - | hypothetical protein Hhal_0320 362017 - 362286 + | hypothetical protein TERM 145 362408 - 362389 - T 100 -13.6 -5.76237 | GAGAGAAATAAAAAA GGGAAGGC CGGG GCCTTCCC GCTGATAGCTAAGGT Hhal_0321 362990 - 362433 - | hypothetical protein TERM 146 363159 - 363174 + H 72 -3.2 -4.61633 | opp_overlap 363159 TGACCAAACATATAC CTAACC ATTC GGTTCG TTTTTGCCCCTATCT TERM 147 363696 - 363709 + G 71 -2.3 -4.5442 | opp_overlap 363689 363683 AAGTAAGACCGACTG GTTCG GCAA CGTAC TTTTATCGTTACCGC TERM 148 363871 - 363853 - g 84 -7.4 -4.75472 | overlap 363859 TCCACAGGAAGAAAA GAACACTC GCA GAGCGTCC CCGACATTGAAGGAA Hhal_0322 363587 - 364726 + | phage integrase family protein TERM 149 364995 - 364959 - f 80 -8.8 -4.34737 | gap 1, opp_overlap 364959 GGAGCAACCAAGAAA CCCCGATGAGA-CAACT ATCA AACAGATCTCATCGGGG TTTTCTTTTAGATAT TERM 150 364959 - 364995 + F 90 -6 -5.11836 | gap 1, opp_overlap 364959 GGAGCAACCAAGAAA CCCCGATGAGA-C AACTATCAAACA GATCTCATCGGGG TTTTCTTTTAGATAT TERM 151 365376 - 365386 + F 70 -2.6 -4.65916 | ATGGCATTATTTAAT TTTT TGT AAAA TTTTCTTGCAATGAA Hhal_0323 365966 - 366214 + | hypothetical protein TERM 152 366357 - 366338 - T 100 -13.6 -5.85425 | opp_overlap 366335 GAAAGAAATAAAAAA GGGAAGGC CGGA GCCTTCCC TAATAATATCAAGCA Hhal_0324 366885 - 366382 - | hypothetical protein TERM 153 366848 - 366860 + g 72 -6.2 -4.26202 | overlap 366832 CGGCGTCCGGTGACG CCGG TGTGT CCGG TTTGTTCCTGCATCT Hhal_0325 368305 - 367085 - | type II secretion system protein Hhal_0326 370156 - 368318 - | type II secretion system protein E Hhal_0327 371421 - 370180 - | TPR repeat-containing protein TERM 154 370983 - 371018 + g 95 -14.6 -4.15044 | gap 1 TCTGCGCCGCCGCCA CGGCGGTGGGCGCGGCC GGC GGCGGCGCCT-CGGCCG TTTCTTGGGGGGCGG TERM 155 371360 - 371374 + g 73 -7 -4.11216 | overlap 371361 CCGGCGTCGCCATCG CCGGCC CCG GGCCGC TTTTCCCGCTCGGCG Hhal_0328 372293 - 371418 - | AAA ATPase Hhal_0329 373939 - 372323 - | pilus (MSHA type) biogenesis protein MshL Hhal_0330 374307 - 373936 - | hypothetical protein Hhal_0331 374968 - 374309 - | MSHA biogenesis protein MshJ Hhal_0332 376636 - 374975 - | fimbrial assembly family protein TERM 156 376696 - 376723 + r 100 -20.6 -4.34402 | opp_overlap 376696 GGCCAACAAAAAAAA CCCCCGGCGTCC TATC GGACGTCGGGGG TTTTGGTGTAGGAGC TERM 157 376723 - 376696 - R 100 -18.4 -6.09888 | opp_overlap 376696 GGCCAACAAAAAAAA CCCCCGGCGTCC TATC GGACGTCGGGGG TTTTGGTGTAGGAGC TERM 158 379356 - 379368 + r 70 -6.2 -4.2354 | AGGTTCTATTTCACT CCCC TCACC GGGG TTCTTTTCGCCTTTC Hhal_0333 383682 - 381985 - | diguanylate cyclase/phosphodiesterase Hhal_0334 385022 - 383811 - | major facilitator transporter Hhal_0335 386690 - 385086 - | BCCT transporter Hhal_0336 388877 - 386904 - | PAS/PAC sensor hybrid histidine kinase Hhal_0337 389698 - 388958 - | OmpA/MotB domain-containing protein Hhal_0338 390561 - 389695 - | MotA/TolQ/ExbB proton channel TERM 159 390842 - 390867 + G 75 -5.4 -4.59773 | gap 2, overlap 390843 390845 ATTTCGCTGTCCTCA G-CC-GGGTGGC GCTG GCCGCCCTGGTC TTTTTGCCCCTGGCG TERM 160 390843 - 390865 + G 70 -9.1 -3.91506 | gap 1, overlap 390842 390845 TTTCGCTGTCCTCAG CC-GGGTGGC GCTG GCCGCCCTGG TCTTTTTGCCCCTGG Hhal_0339 390742 - 391620 + | hypothetical protein Hhal_0340 391617 - 393176 + | phospholipase D/transphosphatidylase cysB 394174 - 393173 - | transcriptional regulator CysB TERM 161 393415 - 393383 - G 73 -12 -3.53012 | gap 1 GGTGCTCGGCGCAAA GAGGTGGCTGGCGTC GCGG GCCACCAGCC-CCTC GTCGGTGTCCGGGTC TERM 162 394203 - 394236 + r 91 -16.6 -3.55444 | overlap 394204 GGCGCCGGATGGTCG CGGGCCGGCCCCGC CTCCTC GCCGGGCCGGCCCC TTTCCAGCGTACACC TERM 163 394204 - 394235 + r 93 -20.1 -2.73124 | overlap 394203 GCGCCGGATGGTCGC GGGCCGGCCCCGC CTCCTC GCCGGGCCGGCCC CTTTCCAGCGTACAC Hhal_0342 395484 - 394264 - | protein of unknown function DUF395, YeeE/YedE TERM 164 394858 - 394801 - G 85 -17 -3.14132 | gap 3 CGGGCCGCGCAGGAA CCGCTGCCAACCGGCGCGCTCG-GCCGCC GCC GGCTGCTCCAACGCGCCG--TGGCGGCGG CGTTCGAAGTACACG Hhal_0343 395767 - 398226 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Hhal_0344 398309 - 399061 + | beta-phosphoglucomutase family hydrolase Hhal_0345 399081 - 399878 + | HAD family hydrolase TERM 165 400832 - 400822 - g 70 -8.2 -3.83568 | GCACACCGACAACAA CGGC GAT GCCG AAGAGCAGACGGTGC Hhal_0346 399875 - 402298 + | trehalose 6-phosphate phosphorylase Hhal_0347 402364 - 402861 + | hypothetical protein Hhal_0348 402950 - 403153 + | TonB-like protein TERM 166 403191 - 403218 + F 100 -14.9 -5.09204 | opp_overlap 403191 403209 TCCGGTGCTGCGAAA CGGGGTTCGAG ACAATA CTCGGACCCCG TTTTTATTGGGCTAT TERM 167 403218 - 403191 - f 78 -12.7 -3.53012 | opp_overlap 403191, overlap 403209 TCCGGTGCTGCGAAA CGGGGTTCGAG ACAATA CTCGGACCCCG TTTTTATTGGGCTAT Hhal_0349 403294 - 404766 + | anion transporter TERM 168 404798 - 404825 + T 100 -24.2 -4.8622 | ACCTCCCCGCAGCCA GGCCGCCGACCC GCCG GGGTCGGCGGCC TTTTTCGTTGGGGGG dinG 406978 - 404843 - | ATP-dependent DNA helicase DinG TERM 169 406234 - 406283 + g 80 -16.3 -3.21099 | overlap 406237 GGGGCGGCAGCAGCA CGCCGCCCTGCTCCTCGCCGAGC TGCA GGTCGGCGAGGAGCAGATCGTGG TTGGTGATCACCACC TERM 170 406237 - 406280 + g 86 -21 -2.80016 | overlap 406234 GCGGCAGCAGCACGC CGCCCTGCTCCTCGCCGAGC TGCA GGTCGGCGAGGAGCAGATCG TGGTTGGTGATCACC Hhal_0351 407080 - 407547 + | hypothetical protein TERM 171 407662 - 407650 - f 80 -4.7 -4.79352 | overlap 407651 TGACCCACAATAAAA CCCGG GGG CCGCG GTGAACGCAGGAGGA Hhal_0352 407682 - 408860 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Hhal_0353 408857 - 411358 + | formate dehydrogenase TERM 172 411493 - 411465 - g 73 -10.2 -3.8211 | opp_overlap 411465 411474, overlap 411468 CGCCATGGAGAACAA CACCCTGCCCGG CGAGT CCTGGCAGGACG TACTGTTCTACAACG Hhal_0354 411382 - 412143 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Hhal_0355 412175 - 413356 + | polysulphide reductase, NrfD Hhal_0356 413413 - 414279 + | cytoplasmic chaperone TorD family protein Hhal_0357 414719 - 414414 - | hypothetical protein Hhal_0358 415043 - 416020 + | TRAP transporter solute receptor TAXI family protein TERM 173 416047 - 416083 + F 100 -21.6 -3.48395 | gap 1 ACAGCCCATTGATCC CCCGCCCCCGCGCCGCA CGCC TGCGAC-CGGGGGCGGG TTGTGTCAGGGGGCT TERM 174 416813 - 416851 + G 70 -9.4 -3.85704 | overlap 416820 TGACCCGACGGATCG CCGGCCTGGCGCTGGTGA TCA TCACCGGCGTCTTCCTGG TTTACTCCTTCGTCG TERM 175 416820 - 416844 + G 74 -14.3 -3.34227 | overlap 416813 ACGGATCGCCGGCCT GGCGCTGGTGA TCA TCACCGGCGTC TTCCTGGTTTACTCC Hhal_0359 416152 - 418323 + | TRAP transporter, 4TM/12TM fusion protein Hhal_0360 418330 - 419265 + | auxin efflux carrier Hhal_0361 421885 - 419270 - | PAS/PAC sensor hybrid histidine kinase Hhal_0362 423546 - 421990 - | methyltransferase type 12 TERM 176 422193 - 422159 - G 83 -15 -3.53811 | gap 1 CCCACGGGCCGGAAA CGCGCCCAGACGGCC TCGGCC AGCCGCC-GGGCGCG GGGCGGGACCCCGTC TERM 177 423445 - 423418 - G 71 -11.3 -3.64703 | gap 2 CTCGGCGTAGCGAAA CG-GCCGG-GCCG GATC CGGCGCCGGCTCG CCCCGCAGGCGGGCC Hhal_0363 425766 - 423733 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 178 424516 - 424504 - G 77 -3.3 -4.68593 | opp_overlap 424512, overlap 424506 TTCACGACTGAAAAA CTGGC AGC GCGAG GCGGTCCGCTTCGAT Hhal_0364 427216 - 425864 - | major facilitator transporter Hhal_0365 427424 - 428350 + | response regulator receiver modulated diguanylate cyclase Hhal_0367 433772 - 432192 - | PAS/PAC sensor hybrid histidine kinase Hhal_0366 428444 - 432244 + | multi-sensor hybrid histidine kinase Hhal_0368 434219 - 433896 - | transport-associated Hhal_0369 434506 - 435102 + | putative PAS/PAC sensor protein TERM 179 435340 - 435358 + G 75 -5.2 -4.58395 | CCTATTCCGGGAGCT GCTGATCG GGA TGACCAGC TTTTTCCGCGATCCC TERM 180 435643 - 435655 + G 75 -4.7 -4.65895 | overlap 435635 435644 CAGTGTATCCGCAGC CCGCC TGC GGCGA TTTTTCACTGCCCAC Hhal_0370 435122 - 437041 + | protein-glutamate O-methyltransferase Hhal_0371 437171 - 437596 + | hypothetical protein TERM 181 437679 - 437628 - f 73 -9.2 -3.88232 | gap 1, opp_overlap 437637 437670, overlap 437629 GGGGGCAGACAACAA CCGCTCCAGCCGGGGGCGGACACCA CTG CGGTGACCGCCCCCGG-TGTTCCAC CTCCCTTCCCAGGCC TERM 182 437678 - 437629 - f 71 -12.7 -2.92618 | gap 1, opp_overlap 437637 437670, overlap 437628 GGGGCAGACAACAAC CGCTCCAGCCGGGGGCGGACACCA CTG CGGTGACCGCCCCCGG-TGTTCCA CCTCCCTTCCCAGGC TERM 183 437637 - 437671 + F 100 -24.3 -3.0464 | opp_overlap 437629 437628, overlap 437670 CAACAACCGCTCCAG CCGGGGGCGGACACC ACTGC GGTGACCGCCCCCGG TGTTCCACCTCCCTT Hhal_0372 437840 - 438493 + | lysine exporter protein LysE/YggA Hhal_0373 439807 - 438575 - | putative metal dependent phosphohydrolase Hhal_0374 440870 - 439905 - | hypothetical protein Hhal_0375 441223 - 441023 - | hypothetical protein Hhal_0376 441386 - 442060 + | cyclase/dehydrase Hhal_0377 442594 - 442064 - | hypothetical protein TERM 184 442313 - 442301 - G 70 -9.1 -3.85698 | GTTGCCGTGGATAAA GGCCA GGG TGGCC GAGAAGATGCTGAAG Hhal_0378 443113 - 442784 - | hypothetical protein Hhal_0379 444539 - 443145 - | ABC transporter related Hhal_0380 445300 - 444536 - | cobalt transport protein Hhal_0381 445877 - 445278 - | hypothetical protein Hhal_0382 446563 - 445874 - | NAD-dependent epimerase/dehydratase family protein Hhal_0383 447117 - 446560 - | hypothetical protein Hhal_0384 448465 - 447107 - | coproporphyrinogen III oxidase Hhal_0385 450617 - 448476 - | TonB-dependent receptor, plug Hhal_0386 450952 - 451158 + | hypothetical protein Hhal_0387 451339 - 453390 + | TonB-dependent receptor Hhal_0388 453970 - 453458 - | hypothetical protein TERM 185 453988 - 454032 + r 100 -15.8 -4.56597 | gap 1, opp_overlap 453992 TTTGGTCTCCTCCAG GACAGC-GCGTTGGGCGGC GGACGATG GCTGCCCAACGCTGCAGTC TTTTTGCGCGCGGGG Hhal_0389 456075 - 454072 - | TonB-dependent receptor TERM 186 454873 - 454853 - G 78 -6.7 -4.56775 | AGGTTGGGGGAAAAA GCGTCACCC TCG GGGTTCCGC TCTCCCAGGGCACTG TERM 187 456595 - 456565 - g 71 -11.1 -3.57462 | gap 1, overlap 456568 GAGGCTATCCCGAAA CGAGGCGCGCCGCC GCGC GGCAGAGCGCCT-G AAACGGGATCGCGTC Hhal_0390 456368 - 456613 + | hypothetical protein TERM 188 456789 - 456805 + G 70 -9.3 -3.85698 | overlap 456775 TTGCGCTGCTCGTTG GCGCGGC GGC GGCGCGC TTTCTGCCCCCGGCC Hhal_0391 456617 - 457090 + | hypothetical protein TERM 189 457176 - 457118 - T 100 -31.1 -3.60098 | gap 1, overlap 457119 AGGGGCCACCGCAAA GCCCCGGTTCCCCCAGCACCTGCTCCGC CTGA GAGGAGCGGGTGCTGGGGGA-CCGGGGT CGAGCGTTCGACGGC TERM 190 457175 - 457119 - T 100 -34.6 -2.75844 | gap 1, overlap 457118 GGGGCCACCGCAAAG CCCCGGTTCCCCCAGCACCTGCTCCGC CTGA GAGGAGCGGGTGCTGGGGGA-CCGGGG TCGAGCGTTCGACGG Hhal_0392 458113 - 457196 - | homocysteine S-methyltransferase TERM 191 457718 - 457684 - G 72 -6.2 -4.34402 | TCTCGCAGATGAAAA GATCGACGCCCTGGGC CTG GGCCTGGGCCTCCACC ATGCGGCGATAGCCC Hhal_0393 459460 - 458195 - | major facilitator transporter Hhal_0394 460023 - 459463 - | TetR family transcriptional regulator Hhal_0395 460496 - 461053 + | hypothetical protein Hhal_0396 461078 - 461323 + | membrane protein Hhal_0397 462074 - 461340 - | CRP/FNR family transcriptional regulator TERM 192 462032 - 462052 + g 73 -10.3 -3.95435 | overlap 462027 462033 CCGCCAGTAGTTGAT TCCCGGCCG GAC CGTCCGGGG TTCTGTTTTGCCCAC TERM 193 462185 - 462220 + r 74 -13.2 -3.28712 | CACAGACTCGTTGCC GGCTTCGGGCGCAGGA TGGT TCCTGCACGCGGGGCC TTCTCCCGGGCGCCG Hhal_0398 463074 - 462571 - | hypothetical protein Hhal_0399 464328 - 463279 - | fatty acid desaturase TERM 194 464130 - 464120 - G 82 -8.2 -4.47328 | AAGCGCACGAGAAAA CCGG CTG CCGG CACGGTGGCGATCAG Hhal_0401 466716 - 467252 + | hypothetical protein Hhal_0402 470720 - 467277 - | pyruvate carboxylase Hhal_0403 471566 - 470787 - | OsmC family protein Hhal_0404 472314 - 471700 - | SOUL heme-binding protein TERM 195 474278 - 474260 - H 91 -6.7 -5.01732 | gap 1, overlap 474262 AACCCTGTGAAAAAA GTCGCGCC GATA GGCGC-AC TCAGGGGGCTTGGGG TERM 196 474605 - 474592 - H 75 -3.8 -4.59081 | overlap 474582 474581 TAAACTGACAGAAAA CCTG TCACCT CAGG AGAAGCTATGGAAAC Hhal_0407 474613 - 474876 + | prevent-host-death family protein Hhal_0408 474873 - 475133 + | addiction module antitoxin Hhal_0409 476324 - 475347 - | hypothetical protein Hhal_0410 476741 - 477256 + | GCN5-related N-acetyltransferase Hhal_0412 481178 - 479943 - | type II restriction endonuclease, putative Hhal_0413 481681 - 481178 - | DNA mismatch endonuclease vsr TERM 197 481402 - 481415 + g 91 -3.1 -5.40072 | overlap 481389 TCCGGTCGCGTTCCC GATTG CGTC CGATC TTTTTTTCCCAGAAC Hhal_0414 482988 - 481678 - | DNA-cytosine methyltransferase TERM 198 482475 - 482437 - G 74 -12.4 -3.66178 | overlap 482440 482442 CCGCGCAACGTCAAA GAACAGGGTTCCCTGCGC CTC GCACAGGAACCCATGCTC GCGTCCCAGGCTGTT TERM 199 482472 - 482440 - G 75 -10.5 -3.96618 | overlap 482437 482442 CGCAACGTCAAAGAA CAGGGTTCCCTGCGC CTC GCACAGGAACCCATG CTCGCGTCCCAGGCT TERM 200 482469 - 482442 - G 74 -12.8 -3.57017 | gap 1, overlap 482440 482437 CAACGTCAAAGAACA GGGTTCCCTGCGC CTC GCACAGG-AACCC ATGCTCGCGTCCCAG Hhal_0415 483209 - 483475 + | XRE family transcriptional regulator TERM 201 483687 - 483676 - T 82 -7.2 -4.66609 | overlap 483677 TACGGCATCGAAAAA GCCG GTCG CGGC CGCGGCACCGACCAG Hhal_0416 484721 - 484131 - | hypothetical protein Hhal_0418 486392 - 485601 - | restriction endonuclease-like protein TERM 202 486286 - 486304 + g 75 -8.8 -4.18018 | opp_overlap 486287, overlap 486287 CCGAGGTTATCAGTA AGTCGCCT TTC AGGCGACC TTTTGCCTCCCCAAG Hhal_0419 488156 - 487062 - | transposase, IS4 family protein TERM 203 487977 - 487961 - G 75 -5.7 -4.4078 | overlap 487962 GGGCCTGAAGCAAAA GCGCCCG GAT CAGTCGC TCCGGCGGGATCGAC TERM 204 488363 - 488331 - g 73 -9.9 -3.86897 | gap 1, opp_overlap 488362 TTGAGGGCCGAGAAA CCCCGAGCCACCTC TTCGCC GAAGCG-CTCGGGG TCGCGCTGCACCATT Hhal_0420 488276 - 488677 + | hypothetical protein Hhal_0421 488709 - 490190 + | hypothetical protein Hhal_0422 491926 - 490262 - | hypothetical protein TERM 205 492082 - 492064 - H 78 -13.8 -3.26319 | AAGCTTCTATATGAA GCCGCGGG GAC CCCGCGAC ATCAGCTGTCGCCGC Hhal_0423 492206 - 492967 + | ADP-ribosylation/crystallin J1 Hhal_0424 492967 - 493416 + | hypothetical protein Hhal_0426 494388 - 494233 - | hypothetical protein TERM 206 494538 - 494590 + H 72 -6.8 -4.26076 | gap 2, overlap 494539 TACCAGATACGCCGT ACTGCGCCCGGTCGCGACCCCTGCTC TCA GGGCCCCA-TCGCG-CCGGGCGCAGC TTTTCATGCACGTGG Hhal_0427 494641 - 496563 + | threonyl-tRNA synthetase Hhal_0428 496648 - 497118 + | translation initiation factor IF-3 TERM 207 497132 - 497172 + F 81 -5.3 -4.91109 | gap 2, overlap 497135 AGGGTGTCGAACCAC GCTGCGGGCGCGTTCCGCT AGTCA GGCGG--CGCGCTCGCTTC TTTTTGTGATGAGGG TERM 208 497135 - 497169 + F 89 -10 -4.56153 | gap 2, overlap 497132 GTGTCGAACCACGCT GCGGGCGCGTTCCGCT AGTCA GGCGG--CGCGCTCGC TTCTTTTTGTGATGA Hhal_0429 497198 - 497392 + | ribosomal protein L35 TERM 209 497669 - 497653 - g 72 -13.7 -3.14344 | CAGCCGCCTGATGAA CGGCCTG CAG CAGGCCG GCATCGAGGTCGATC Hhal_0430 497411 - 497770 + | ribosomal protein L20 TERM 210 498510 - 498528 + G 71 -11.6 -3.61764 | overlap 498519 CAACGCCTTCTTCGA GCGCCCGG TGG CCGTGCGC TTTCGGCCTTCGTAC Hhal_0431 497788 - 498819 + | phenylalanyl-tRNA synthetase, alpha subunit Hhal_0432 498823 - 501201 + | phenylalanyl-tRNA synthetase, beta subunit Hhal_0433 501203 - 501508 + | integration host factor, alpha subunit TERM 211 501696 - 501716 + GT 74 -11.1 -3.59979 | ATCCGCCGTATCCGC GCCCTGCTC TAC GAGGAGGGC TTTACCATCGGCGGC Hhal_0434 501483 - 501845 + | MerR family transcriptional regulator TERM 212 502011 - 501974 - T 100 -22.9 -2.66695 | opp_overlap 501979, overlap 501979 GCCCCGACCAAACAC CAAAAGGCCGCGGAACG GGAT CGTTCCGCGGCCTTTTT CGTCGGGGGTCGCCG TERM 213 502006 - 501979 - T 100 -22.8 -4.51363 | opp_overlap 501979, overlap 501974 GACCAAACACCAAAA GGCCGCGGAACG GGAT CGTTCCGCGGCC TTTTTCGTCGGGGGT TERM 214 501979 - 502006 + T 100 -22.8 -4.7254 | opp_overlap 501979 501974 GACCAAACACCAAAA GGCCGCGGAACG GGAT CGTTCCGCGGCC TTTTTCGTCGGGGGT Hhal_0435 502585 - 502043 - | hypothetical protein Hhal_0436 503299 - 502634 - | putative transmembrane anti-sigma factor Hhal_0437 503892 - 503299 - | Fis family transcriptional regulator Hhal_0438 505141 - 503930 - | hypothetical protein TERM 215 505399 - 505388 - g 79 -2.2 -4.91109 | GGCCCACGAGAAAAA GCAT GAGT ACGC CGACGCCCTGCGCGC Hhal_0439 505245 - 505517 + | hypothetical protein Hhal_0440 506283 - 505564 - | hypothetical protein TERM 216 506370 - 506332 - R 71 -7.3 -4.08692 | gap 1, overlap 506342 TAATGGTTTCGAAAA CCGACGGAAACCGGACGC TCAG GCGTCCGGAATGCG-CAG CTCTTCGATATCCCG TERM 217 506361 - 506342 - R 89 -15 -3.71148 | overlap 506332 GAAAACCGACGGAAA CCGGACGC TCAG GCGTCCGG AATGCGCAGCTCTTC Hhal_0441 506724 - 506350 - | histone family protein nucleoid-structuring protein H-NS Hhal_0442 508338 - 506878 - | anion transporter TERM 218 507982 - 507943 - G 72 -14.2 -3.14132 | gap 1 GGTGGCGCCCATGAA CCCGGCCACCAGGAGATCG TCA CGCCCGCC-GGTGGCCGAG AGGATGAGCAGCGCG Hhal_0443 509960 - 508335 - | methyl-accepting chemotaxis sensory transducer TERM 219 508364 - 508404 + g 79 -15.3 -3.29947 | GCTCGACCAGCTTGC GCAGGTCGCGGGCGAGCAC TTC GAGCTCGTCGCCGGCCTGC TTCGTCTCGTGGCTC Hhal_0444 511466 - 510060 - | signal recognition particle protein TERM 220 510500 - 510513 + g 76 -2.4 -4.6902 | overlap 510495 TACCGCCCTTCTTGA GCTT CTTCTC AAGC TTTTTCGCCTTCTCC Hhal_0445 511542 - 512411 + | cytochrome c assembly protein Hhal_0446 512985 - 512395 - | redoxin domain-containing protein Hhal_0447 514085 - 513060 - | TRAP dicarboxylate transporter- DctP subunit TERM 221 513953 - 513987 + g 73 -12.8 -3.40403 | overlap 513954 CGACCTCTTCGGCGA AGCGGGTGGCGTAC TCGTACT GCACGCCACCCGCC TTCTCCTCCAGGGCG TERM 222 513954 - 513986 + g 73 -16.3 -2.64099 | overlap 513953 GACCTCTTCGGCGAA GCGGGTGGCGTAC TCGTACT GCACGCCACCCGC CTTCTCCTCCAGGGC Hhal_0448 515127 - 514105 - | TRAP dicarboxylate transporter- DctP subunit TERM 223 514347 - 514374 + g 77 -3.4 -4.72272 | gap 1, overlap 514334 514346 514348 CCCAGTCGACCATGT C-GGCGGTGATCT CGC GGATCATCTCCTG TTTTTCGTCGGGGAG Hhal_0449 515245 - 515811 + | tripartite ATP-independent periplasmic transporter DctQ Hhal_0450 515808 - 517091 + | TRAP dicarboxylate transporter, DctM subunit Hhal_0451 517827 - 517099 - | TonB family protein Hhal_0452 518233 - 517829 - | biopolymer transport protein ExbD/TolR Hhal_0453 518634 - 518230 - | biopolymer transport protein ExbD/TolR Hhal_0454 519307 - 518624 - | MotA/TolQ/ExbB proton channel TERM 224 519403 - 519385 - R 88 -9.5 -4.62471 | opp_overlap 519394 519394 TTCAATGGCGAAAAA GGCGACC CGGGC GGCCGCC TCGGCAGGCCACCGT Hhal_0455 519916 - 519419 - | hypothetical protein Hhal_0456 520500 - 519913 - | hypothetical protein Hhal_0457 521514 - 520546 - | patatin Hhal_0458 522394 - 521690 - | hypothetical protein Hhal_0459 524664 - 522499 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 225 524720 - 524748 + r 95 -15.9 -4.12188 | opp_overlap 524714 524716 524713, overlap 524721 AGCATAAAGCAGCCC GTGGGCCGGCGCG GCG CGCGCTGGCCCGG TTTTCAGGATGCTCG TERM 226 524721 - 524747 + r 93 -19.4 -3.06991 | opp_overlap 524714 524716 524713, overlap 524720 GCATAAAGCAGCCCG TGGGCCGGCGCG GCG CGCGCTGGCCCG GTTTTCAGGATGCTC TERM 227 524909 - 524862 - R 74 -14.9 -2.53876 | gap 3 CGCTACTTCAAGGCA GTGG--GGCGGTCCGACCGCCCGG CGG CCGGGCGG-CGCAGCGCCAACCAC GCGGCACCCGGCGCT TERM 228 524952 - 524909 - R 75 -15.3 -2.72344 | gap 2 GCGCAGCGCCAACCA CGCGGCACCCGGCGCTGCCCG AACC CGGAC--CGCCGGGCACCGCA CTTGCGCCAGTCAAT Hhal_0460 527680 - 524963 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 229 525793 - 525815 + g 79 -14.8 -3.35996 | CCTGGCCGTGCCCCT GCAGCGCCTG GAC CAGGCGCAGC TTGTGGATGGGCGTG Hhal_0461 529391 - 527727 - | Na+/Pi-cotransporter TERM 230 529425 - 529414 - H 76 -5.8 -4.56597 | TCCTGTCGCCAAAAA CCGA TGCG TCGG GACGGGATGTTAGAC Hhal_0462 529469 - 530236 + | hypothetical protein Hhal_0463 530284 - 533418 + | DNA polymerase III, alpha subunit Hhal_0464 533807 - 533415 - | RNA-binding S4 domain-containing protein Hhal_0465 534349 - 533855 - | ribonuclease activity regulator protein RraA Hhal_0466 534436 - 535398 + | diguanylate cyclase Hhal_0467 535421 - 536530 + | ribulose-bisphosphate carboxylase TERM 231 536652 - 536618 - g 79 -15.7 -3.33315 | gap 1, overlap 536609 GGAAGAGGCCTACAA GGCGGAGGGCACCCAC TTCA GCG-GTGCCCGCCGCC AGACCCTGGTCGGCC Hhal_0468 536535 - 537008 + | cupin 2 domain-containing protein Hhal_0469 537033 - 538313 + | hypothetical protein TERM 232 538543 - 538599 + T 72 -7 -4.20516 | overlap 538540 538582 CGCCGGGGCTGCGCT GCTCGGC-GCGCCCAATGGCGGGGTGGC AGG GCCCCCAC-CCACGGCGCGCCGGCGGGC TTTGTTGCCTGCGCC Hhal_0470 539156 - 538659 - | putative CheW protein Hhal_0471 540126 - 539176 - | putative CheW protein TERM 233 539686 - 539672 - G 79 -7 -4.41616 | opp_overlap 539677, overlap 539673 AGCGCCTGAAAGAAA GGCCGG GCC CAGGCC GGCGTCGGATCGGCC TERM 234 539975 - 539998 + g 82 -17.4 -3.01712 | GCCGCCTCTGCGGCA GCCGCCTCCG GCTC CGGGGGCGGC TGTTCCCCGCCCGGA Hhal_0472 540916 - 540119 - | cobyrinic acid a,c-diamide synthase Hhal_0473 542124 - 540937 - | chemotaxis-specific methylesterase Hhal_0474 544388 - 542169 - | CheA signal transduction histidine kinases TERM 235 543969 - 544005 + g 85 -16.4 -3.62046 | overlap 543970 CGGCGCCGGCTCGGC ACCGGCAGCCGGCGGC GCAGA GCCGCCGGCATCCGGC TTCTTGAGGCGGTCG TERM 236 543970 - 544004 + g 83 -19.9 -2.77013 | overlap 543969 GGCGCCGGCTCGGCA CCGGCAGCCGGCGGC GCAGA GCCGCCGGCATCCGG CTTCTTGAGGCGGTC Hhal_0475 545213 - 544428 - | chemotaxis phosphatase, CheZ Hhal_0476 545620 - 545219 - | response regulator receiver protein TERM 237 545495 - 545549 + g 82 -6.4 -4.77036 | gap 1, overlap 545486 545497 CAGGATGGGCAGCGC CGTGTTGC-CGTCGTCGGCTTCAAC CACGTT GTTGTAGCCGAGCTCGCGCAACAGG TTTTTGATGATGCGC Hhal_0477 546399 - 545656 - | FliA/WhiG family RNA polymerase sigma factor TERM 238 546339 - 546361 + g 74 -15.6 -3.01712 | CCAGGGAGGCGTGGC GGGTGACGAG GTC CTCGTCGCCC TGTTGCGCCACCGCG Hhal_0478 547232 - 546399 - | cobyrinic acid a,c-diamide synthase Hhal_0479 549028 - 547271 - | GTP-binding signal recognition particle Hhal_0481 552327 - 551152 - | flagellar biosynthetic protein FlhB Hhal_0482 553122 - 552331 - | flagellar biosynthetic protein FliR Hhal_0483 553392 - 553123 - | flagellar biosynthetic protein FliQ TERM 239 553558 - 553548 - R 72 -6.8 -4.29106 | overlap 553549 GGTCACAGGAAGAAA CTGG ACG CCAG GGTGCCCATGATCAG fliP 554275 - 553535 - | flagellar biosynthesis protein FliP Hhal_0485 554740 - 554279 - | flagellar biosynthesis protein, FliO Hhal_0486 555264 - 554740 - | flagellar motor switch protein FliN Hhal_0487 556406 - 555261 - | flagellar motor switch protein FliM Hhal_0488 556877 - 556419 - | flagellar basal body-associated protein FliL Hhal_0489 557137 - 558627 + | hypothetical protein Hhal_0490 558660 - 559562 + | periplasmic solute binding protein TERM 240 559627 - 559647 + G 100 -19.7 -3.90112 | opp_overlap 559620 559619 ACCATAAGGCGGCCT CGGGCGGGG CAC CCCCGCCCG TTTCGTTCCCCCGAA Hhal_0491 559603 - 560277 + | ABC transporter related Hhal_0492 560277 - 561077 + | ABC-3 protein Hhal_0493 562450 - 561068 - | flagellar hook-length control protein Hhal_0494 563000 - 562536 - | flagellar export protein FliJ Hhal_0495 564346 - 562997 - | flagellar protein export ATPase FliI TERM 241 563099 - 563084 - G 78 -6 -4.56597 | overlap 563086 GTCCTGCTGCAAAAA GGCGCG CAGC CGCGGC TGGTACTGGATAGCC Hhal_0496 565266 - 564343 - | flagellar assembly protein FliH TERM 242 565085 - 565117 + g 79 -14.8 -3.31461 | gap 1, overlap 565084 AGCCGCTCGGCCACG GC-CTGGCGGCGGCG CTCG CGCCGGCGCCGGCGC TTCTCACGCTCGATC Hhal_0497 566312 - 565323 - | flagellar motor switch protein FliG Hhal_0498 568105 - 566318 - | flagellar M-ring protein FliF TERM 243 567198 - 567222 + g 70 -15.7 -2.75064 | opp_overlap 567184 567181, overlap 567195 AGCCGGGCGCTGACC TGGGCCCGGAC CCG GTCCGGGCCGA TGATTGGCTCGACCA Hhal_0499 568433 - 568122 - | flagellar hook-basal body complex subunit FliE TERM 244 568455 - 568493 + r 89 -18.3 -3.14931 | gap 1, opp_overlap 568466 ACCTCAGTTGCCGTA GGCGTAGAGCATCCCGGA GCGC TCCGGGAT-CTCGACGCC TTCCTGACGCATGCG Hhal_0500 569873 - 568443 - | two component, sigma54 specific, Fis family transcriptional regulator Hhal_0501 571513 - 570113 - | sigma-54 dependent trancsriptional regulator Hhal_0502 571962 - 571615 - | hypothetical protein Hhal_0503 572396 - 571974 - | flagellar protein FliS Hhal_0504 573948 - 572518 - | flagellar hook-associated 2 domain-containing protein Hhal_0505 574439 - 574026 - | flagellar protein FlaG protein Hhal_0506 575993 - 574515 - | flagellin domain-containing protein TERM 245 576268 - 576315 + r 80 -14.9 -3.14211 | gap 1, opp_overlap 576277 CGGCTCGGGGTCAGC GAGCCGAAAGCGGAGCCCGG GGGGTCAAG CCGGGCTCCGCCT-CGGGTC TTACTGCAGCAGGGT TERM 246 576307 - 576277 - R 91 -16.9 -3.61178 | opp_overlap 576268 GTCAGCGAGCCGAAA GCGGAGCCCGG GGGGTCAAG CCGGGCTCCGC CTCGGGTCTTACTGC Hhal_0507 577725 - 576316 - | flagellin domain-containing protein TERM 247 578079 - 578054 - R 100 -19.1 -5.40072 | GGGCGGGCAAAAAAA TGCCGGGAAGG CAAC CCTTCCCGGCA ATCAAGCGCCGATCA Hhal_0508 580460 - 578166 - | TonB-dependent receptor Hhal_0509 581438 - 580707 - | hypothetical protein Hhal_0510 582822 - 581560 - | flagellar hook-associated protein 3 Hhal_0511 584890 - 582833 - | flagellar hook-associated protein FlgK Hhal_0512 585919 - 584933 - | flagellar rod assembly protein/muramidase FlgJ flgI 587045 - 585930 - | flagellar basal body P-ring protein TERM 248 586382 - 586410 + g 85 -15.9 -3.54029 | opp_overlap 586374 GAACCGACCCGGCAT CCTCGGCCCGCGC GGT GCGCGGCCCCAGG TTGTGGTTGATCACC Hhal_0514 587782 - 587096 - | flagellar L-ring protein Hhal_0515 588578 - 587793 - | flagellar basal-body rod protein FlgG Hhal_0516 589372 - 588632 - | flagellar basal-body rod protein FlgF Hhal_0517 590675 - 589419 - | flagellar basal body FlaE domain-containing protein Hhal_0518 591593 - 590712 - | flagellar hook capping protein Hhal_0519 592180 - 591611 - | flagellar basal-body rod protein FlgC Hhal_0520 592594 - 592187 - | flagellar basal-body rod protein FlgB Hhal_0521 593566 - 592739 - | protein-glutamate O-methyltransferase Hhal_0522 594520 - 593585 - | putative CheW protein TERM 249 593853 - 593885 + g 79 -11.2 -3.99775 | gap 1 GGGTCCTGGTCCTTC CAGGCGCGCAGCTGC TCCA GC-GCTTCGCGCCCG TTGTTCTTGGTGACT Hhal_0523 594663 - 595451 + | SAF domain-containing protein Hhal_0524 595616 - 595927 + | anti-sigma-28 factor, FlgM Hhal_0525 595927 - 596454 + | FlgN family protein TERM 250 596884 - 596826 - g 82 -16.8 -3.30124 | gap 3 GCGCATCCTGGACAA TCCGGAGCGGGCGGCCGAGTCCGTGCGCG ACAC CGCCCACGAACCCG-CCGCCAG--CCGGA TGAGCCGGGCGATCG Hhal_0526 596515 - 596913 + | hypothetical protein Hhal_0527 597259 - 596906 - | ribosomal protein L19 Hhal_0528 598071 - 597277 - | tRNA (guanine-N1)-methyltransferase Hhal_0530 598837 - 598577 - | ribosomal protein S16 TERM 251 598874 - 598889 + r 75 -11.8 -3.43264 | TACGTTGAGTCATCG GCCCCC AAGT GGGGGC TTCTGATACGTACTT Hhal_0531 599386 - 598973 - | hypothetical protein Hhal_0532 601332 - 599383 - | helicase c2 Hhal_0533 601906 - 601322 - | TPR repeat-containing protein Hhal_0534 602092 - 603411 + | methyl-accepting chemotaxis sensory transducer Hhal_0535 603435 - 604898 + | methyl-accepting chemotaxis sensory transducer Hhal_0536 606212 - 604962 - | SufS subfamily cysteine desulfurase TERM 252 605382 - 605368 - G 73 -12.8 -3.53012 | GTCCCCGCCTCGAAA CGCGCC GGC GGCGCG GCGTACTCGGTGCCG Hhal_0537 607546 - 606209 - | FeS assembly protein SufD Hhal_0538 608300 - 607548 - | FeS assembly ATPase SufC Hhal_0539 609801 - 608326 - | cysteine desulfurase activator complex subunit SufB Hhal_0540 610275 - 609823 - | BadM/Rrf2 family transcriptional regulator Hhal_0541 610443 - 610709 + | hypothetical protein Hhal_0542 612753 - 610723 - | excinuclease ABC subunit B TERM 253 612221 - 612254 + g 74 -16 -2.78384 | CGGGTGTACTGCAGT TCGGCCAGCCGGCG CAGGAT CGCCCGCTGGTCGA TCTGCTCACCGCGCA Hhal_0543 612907 - 614091 + | aminotransferase, class I and II Hhal_0544 614634 - 614362 - | hypothetical protein Hhal_0545 614977 - 614621 - | ferredoxin Hhal_0546 615271 - 615059 - | hypothetical protein Hhal_0547 617557 - 615383 - | catalase/peroxidase HPI TERM 254 618273 - 618293 + G 86 -9.7 -4.58395 | overlap 618256 CTGGCCCTGACCGGC GGCGCCA TCGTCTC TGGCGCC TTTTTCGGCGATAAG Hhal_0548 617781 - 619313 + | Na+/H+ antiporter NhaC TERM 255 619325 - 619365 + F 100 -34.1 -3.35996 | overlap 619326 CTAACCTCGCGGCAA CGCCGGGGTTGGGGGCGGC CTG GCCGCCCCCAACCCCGGCC TTCTCACTGCACCTC TERM 256 619326 - 619364 + F 100 -37.6 -2.61383 | overlap 619325 TAACCTCGCGGCAAC GCCGGGGTTGGGGGCGGC CTG GCCGCCCCCAACCCCGGC CTTCTCACTGCACCT TERM 257 620777 - 620756 - g 82 -15.9 -3.29144 | GCAGGTCGCCGAGAA CGCCTCGGA CGCC TCCGAGGCG GCCCGGAGATCCGAT Hhal_0549 619509 - 621431 + | methyl-accepting chemotaxis sensory transducer Hhal_0550 622294 - 621446 - | short-chain dehydrogenase/reductase SDR TERM 258 622354 - 622310 - R 100 -26.3 -2.52676 | GATCGCTGCAAGCTA GCGGCCCGCCCGCCCCGGGTC AAC GCCCTGGGGCGGGCGAGCCGG CGATCTAGAAATTGT Hhal_0551 624560 - 622359 - | TonB-dependent receptor Hhal_0552 625127 - 624639 - | hypothetical protein TERM 259 625184 - 625203 + H 78 -13.6 -3.25823 | opp_overlap 625184 ATCACCCTGGTAGAA GCGGAACC GGCA GGTTCCGC TTGCTCTAAAAAGAC TERM 260 625203 - 625184 - H 78 -13.6 -3.2963 | opp_overlap 625184 ATCACCCTGGTAGAA GCGGAACC GGCA GGTTCCGC TTGCTCTAAAAAGAC Hhal_0553 625386 - 626552 + | cation diffusion facilitator family transporter TERM 261 626611 - 626553 - T 86 -15.4 -3.21218 | gap 3, opp_overlap 626560, overlap 626554 ATCGGCCACCACTAA CCGGCCACCAC-CGTCCATGCCCCCGGGC CAAC GCCCGGGGGCATGGACGCGCGGTTT--AG CGGGTGCCTTGTTCG TERM 262 626611 - 626554 - T 89 -19.2 -2.52516 | opp_overlap 626560, overlap 626553 TCGGCCACCACTAAC CGGCCACCAC-CGTCCATGCCCCCGGGC CAAC GCCCGGGGGCATGGACGCGCGGTTTA-G CGGGTGCCTTGTTCG TERM 263 626560 - 626606 + T 100 -30.3 -3.5594 | gap 1, opp_overlap 626553 626554 ACCACTAACCGGCCA CCAC-CGTCCATGCCCCCGGGC CAAC GCCCGGGGGCATGGACGCGCGG TTTAGCGGGTGCCTT Hhal_0554 628089 - 626608 - | sodium/proline symporter TERM 264 630263 - 630226 - g 77 -14.7 -3.21099 | GCGGCCGATCATCAA CGGCCAGGGCGCCACCG AGGC CGACGGCACCTGGGCCG AGGTCTGCAGCCCCA Hhal_0555 628541 - 631708 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase Hhal_0556 632948 - 631977 - | cysteine synthases TERM 265 633848 - 633829 - g 72 -8.5 -4.07568 | CCTCGCCTCGGAAAA CGCCGGC TTCATC ACCGGCG CCAACCTGGATATCA Hhal_0557 633140 - 633886 + | acetoacetyl-CoA reductase TERM 266 633931 - 633887 - T 78 -14.2 -3.20382 | gap 1, overlap 633865 633888 CTGCACATGGAGTAA CCGCCGATGGCGGGGGACAGG CCGC CCTGCCCCCCGCTCT-GGCGC CCCTAGTCGGCGCCG TERM 267 633930 - 633888 - T 83 -17.7 -2.52015 | gap 1, overlap 633865 633887 TGCACATGGAGTAAC CGCCGATGGCGGGGGACAGG CCGC CCTGCCCCCCGCTCT-GGCG CCCCTAGTCGGCGCC Hhal_0558 634233 - 633934 - | Fis family transcriptional regulator Hhal_0559 635077 - 634367 - | orotidine 5'-phosphate decarboxylase TERM 268 634638 - 634683 + g 70 -15.4 -2.78816 | gap 2 CTCGCCTGGGCTAGG CCGGCCAGGCGCAGGACCGCCT CGCG GGGCGGTCC-G-GCCAGGCCGA TCTCCTCGAGGGTCG Hhal_0560 636243 - 635074 - | hypothetical protein Hhal_0561 636542 - 636249 - | hypothetical protein Hhal_0562 636885 - 636577 - | integration host factor, beta subunit TERM 269 636910 - 636962 + r 81 -13.9 -3.47227 | overlap 636914 636955 ATCTCTGCTTGCTGG CTCGGATCGGCAGGACCGGGGGGCC CGA GGCCCCCCGGTGTCACCGGACTCAG TTGTCCTGATTGCCC TERM 270 636914 - 636958 + r 77 -15.5 -2.62292 | overlap 636910 636955 CTGCTTGCTGGCTCG GATCGGCAGGACCGGGGGGCC CGA GGCCCCCCGGTGTCACCGGAC TCAGTTGTCCTGATT rpsA 638641 - 636959 - | 30S ribosomal protein S1 TERM 271 638691 - 638709 + r 70 -13.8 -2.55896 | overlap 638690 638687 TGTTGATGGTGGATT TCGGCGGC CAC GCCGCCGG CTCTTCCTTCATCGA Hhal_0564 639454 - 638771 - | cytidylate kinase Hhal_0565 640832 - 639498 - | 3-phosphoshikimate 1-carboxyvinyltransferase Hhal_0566 641713 - 640838 - | prephenate dehydrogenase Hhal_0567 642855 - 641710 - | histidinol-phosphate aminotransferase Hhal_0568 643947 - 642859 - | chorismate mutase Hhal_0569 645126 - 643957 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Hhal_0570 646211 - 645132 - | phosphoserine aminotransferase Hhal_0571 648857 - 646287 - | DNA gyrase, A subunit Hhal_0572 648939 - 650666 + | sodium/hydrogen exchanger TERM 272 650816 - 650793 - T 75 -12.4 -3.53091 | opp_overlap 650797, overlap 650794 AGGGCCGCGCGCAAA GGAACGGCGC TGGA GCGCCGTTCT GCGCTGCGCGCTGAC TERM 273 650815 - 650794 - T 78 -15.9 -2.71712 | opp_overlap 650797, overlap 650793 GGGCCGCGCGCAAAG GAACGGCGC TGGA GCGCCGTTC TGCGCTGCGCGCTGA TERM 274 650797 - 650812 + T 73 -11.8 -3.32844 | opp_overlap 650794 650793 CCGCGCGCAAAGGAA CGGCGC TGGA GCGCCG TTCTGCGCTGCGCGC Hhal_0573 652006 - 650942 - | eIF-2B alpha/beta/delta-related uncharacterized proteins Hhal_0574 652045 - 653370 + | N-ethylammeline chlorohydrolase Hhal_0575 653397 - 654134 + | ubiquinone biosynthesis O-methyltransferase Hhal_0576 654131 - 654823 + | phosphoglycolate phosphatase Hhal_0577 654833 - 655684 + | squalene/phytoene synthase TERM 275 655754 - 655777 + F 71 -13.9 -2.78384 | CCAAGCAGGGGGCCA GCGCGAACC TTTCCT GGTTCGCGC TCTGGTCAGCGCGCA TERM 276 655797 - 655820 + F 75 -12.4 -3.53091 | opp_overlap 655801, overlap 655798 GTCAGCGCGCAGCGC AGAACGGCGC ACCA GCGCCGTTCC TTTGCGCGCGGCCCT TERM 277 655798 - 655819 + F 78 -15.9 -2.71712 | opp_overlap 655801, overlap 655797 TCAGCGCGCAGCGCA GAACGGCGC ACCA GCGCCGTTC CTTTGCGCGCGGCCC TERM 278 655816 - 655801 - f 73 -11.8 -3.32844 | opp_overlap 655798 655797 GCGCGCAGCGCAGAA CGGCGC ACCA GCGCCG TTCCTTTGCGCGCGG Hhal_0578 656065 - 656646 + | guanosine polyphosphate pyrophosphohydrolases/synthetases-like protein TERM 279 656971 - 656949 - g 70 -12 -3.30124 | GGTCATCCTCGATAA GGACCTCAAG GCC CTCGAGGCCC TCTACGACCGCATCG Hhal_0579 656794 - 657570 + | short-chain dehydrogenase/reductase SDR Hhal_0581 659055 - 658219 - | pseudouridine synthase Hhal_0580 657567 - 658271 + | HhH-GPD family protein Hhal_0582 659677 - 659045 - | putative transcriptional regulator Hhal_0583 660501 - 659674 - | chromosome segregation and condensation protein ScpA Hhal_0584 661715 - 660498 - | tryptophanyl-tRNA synthetase Hhal_0585 662384 - 661758 - | Sua5/YciO/YrdC/YwlC family protein Hhal_0586 662474 - 662773 + | YciI-like protein TERM 280 662860 - 662908 + T 73 -5.9 -4.36914 | gap 1, overlap 662837 662836 662862 TGAGCACCGCAGCCC CGGCGGGGGTTCAGCGCGAACC TTTGCC GGTTCGCGCTGA-TCAGCGAGG TTTTGTCCGAGCGGC TERM 281 663000 - 662943 - T 76 -14 -3.05463 | opp_overlap 662947 AGCGCCGCGAGTTAA GCGAGCG-GCCCCGCCGGGGCGAGGCGC GCAA GGGACCC-CGCCAGCGGGGCGCGCTCGT TCGGCGCCGGTCCGG Hhal_0587 663590 - 663096 - | TspO and MBR like proteins Hhal_0588 663820 - 663587 - | redox-active disulfide protein 2 Hhal_0589 664869 - 663871 - | permease TERM 282 664714 - 664678 - G 72 -13.7 -3.14931 | gap 1, overlap 664657 GCGACCGGCCAGGAA GGCCCGCACC-CGCTC CACGTT GAGCGAGGCCCGGGCC AGGGCGATAACATAG TERM 283 665546 - 665572 + G 81 -4.4 -4.82667 | gap 1, overlap 665551 GAATCCGACGTCACC CGGTTGCCCCG CCGGCC CGGGG-AGCTG TTTTTGCTCTGCTCC Hhal_0590 665015 - 665740 + | protein phosphatase 2C domain-containing protein Hhal_0591 667171 - 665753 - | small GTP-binding protein TERM 284 667275 - 667240 - R 73 -11.9 -3.40403 | gap 2, overlap 667244 GGGCGGGGATTATAA CGGACGGGGCAACGGCC CGTG AGCCGCTGCCCC--CCG GGGAAGGTCAGACCA Hhal_0592 667639 - 667283 - | hypothetical protein TERM 285 667726 - 667767 + r 91 -16.8 -3.75153 | gap 1, overlap 667729 GGCGTTGCCGGTTAC GAGTAGGACCTGCAACCCG CGTGC CGGGTTCCAGGTCCTA-TC TTTGCCTTACCCCCG TERM 286 667729 - 667765 + r 100 -19.6 -3.46068 | overlap 667726 GTTGCCGGTTACGAG TAGGACCTGCAACCCG CGTGC CGGGTTCCAGGTCCTA TCTTTGCCTTACCCC Hhal_0593 669050 - 667815 - | hypothetical protein TERM 287 668584 - 668554 - G 70 -8.3 -3.85817 | gap 2, overlap 668540 ACCCGGCCCCAGAAA TCGCCGAGCTGGCGC AGG GC-CCAGC-CGCCGA CGACCAGGAAGGCGA Hhal_0594 670771 - 669179 - | ABC transporter related Hhal_0595 671807 - 670764 - | binding-protein-dependent transport systems inner membrane component Hhal_0596 672909 - 671812 - | binding-protein-dependent transport systems inner membrane component TERM 288 672871 - 672832 - G 79 -2.1 -4.93365 | gap 1, overlap 672825 672833 672834 CTGCACAATCAAAAA GTTGATGACCATGATCCC GAGCA GGG-TCGGGATCATCAGC AGCAGGCGACGCAGG Hhal_0597 674814 - 672913 - | extracellular solute-binding protein TERM 289 674028 - 674008 - G 70 -12.5 -3.27525 | opp_overlap 674008, overlap 673981 673982 674003 GCGGTCGAAATTGAA CCGCCCGCG ACG CACGGGCAG GTCTTCCGCCCAGTA Hhal_0598 674879 - 675670 + | short-chain dehydrogenase/reductase SDR TERM 290 675735 - 675710 - T 100 -17.5 -4.05446 | opp_overlap 675710 GCGCTGAACCAGAAA GGCCCCGCGGC GTGA GCTGCGGGGCC TTTTACGTTGGGCCG TERM 291 675710 - 675735 + T 100 -19.7 -4.27316 | opp_overlap 675710 GCGCTGAACCAGAAA GGCCCCGCGGC GTGA GCTGCGGGGCC TTTTACGTTGGGCCG TERM 292 675969 - 675947 - T 100 -20.6 -4.09511 | opp_overlap 675947 AACACCTCGCTAAAA GCGCCGACGC CCA GCGTCGGCGC TTTTCCCCGCTCGGG TERM 293 675947 - 675969 + T 100 -20.6 -4.09685 | opp_overlap 675947 AACACCTCGCTAAAA GCGCCGACGC CCA GCGTCGGCGC TTTTCCCCGCTCGGG Hhal_0599 677696 - 676122 - | hypothetical protein TERM 294 677769 - 677738 - R 77 -15.3 -2.82516 | opp_overlap 677745, overlap 677745 TGGGGGATCAGGATA CAAAAAAGGCGCC ACTGTG GGCGCCTTCTTTG TTGCGGCCGATTGGG TERM 295 677762 - 677745 - R 100 -9.8 -5.39721 | opp_overlap 677745, overlap 677738 TCAGGATACAAAAAA GGCGCC ACTGTG GGCGCC TTCTTTGTTGCGGCC TERM 296 677745 - 677762 + r 81 -9.8 -4.20367 | opp_overlap 677745 677738 TCAGGATACAAAAAA GGCGCC ACTGTG GGCGCC TTCTTTGTTGCGGCC TERM 297 677769 - 677792 + r 79 -6.7 -4.56597 | gap 1, overlap 677771 677772 GTGGGCGCCTTCTTT GT-TGCGGCC GATTG GGCCGCGTAC TTTTTGGCGGAGCGG Hhal_0600 678285 - 678013 - | histone family protein DNA-binding protein Hhal_0601 681003 - 678541 - | ATP-dependent protease La TERM 298 681037 - 681064 + r 71 -14 -2.66733 | GCGTGCGAACGGCGG GACGCGCGCGGC GGTG GCCGCGCGCCCC TCCTCTGGGTTCGGA clpX 682408 - 681128 - | ATP-dependent protease ATP-binding subunit TERM 299 682515 - 682478 - R 88 -17.8 -3.05816 | gap 1 TCAGCGGGTACGCAA CCAGCCCACGGCGCCTC ACTCG GAGGCGCCGCGA-CTGG TCAGAACCCGGTCGA Hhal_0603 683125 - 682493 - | ATP-dependent Clp protease, proteolytic subunit ClpP Hhal_0604 684461 - 683151 - | trigger factor Hhal_0605 684797 - 685621 + | hypothetical protein Hhal_0606 685675 - 686154 + | flagellar basal body-associated protein FliL TERM 300 686214 - 686179 - T 100 -21.2 -2.52896 | gap 1, overlap 686156 CGACGGCCGAACCGA GTGGGGGCACC-CCGGC GTA GCCGACGGCGCCCCCAC CCGCTCCGGCGGCGA Hhal_0607 687600 - 686230 - | amino acid carrier protein Hhal_0608 688262 - 687666 - | flavoprotein WrbA Hhal_0609 688931 - 688554 - | type IV pilus assembly PilZ Hhal_0610 689841 - 688969 - | methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 301 690317 - 690336 + H 86 -10.6 -4.26076 | overlap 690318 CATCTTTCGATGCGC AGGCCCGG TCCG CCGGGCCG TTTTCGTCGCCGTCC TERM 302 690318 - 690335 + H 76 -14.1 -3.15324 | overlap 690317 ATCTTTCGATGCGCA GGCCCGG TCCG CCGGGCC GTTTTCGTCGCCGTC TERM 303 690570 - 690594 + H 80 -14.3 -3.34005 | TGGCGGGCTCCGAAG GGGCCGGTG CTGCGTC CACCGGCCC TTCTCCCACTTCCTT TERM 304 692407 - 692427 + G 74 -12.6 -3.63515 | GAGCGAGAGATCCTT GCGCCGAT GCGCG ATCGGCGC TTCTTCAGCCTGGCG Hhal_0612 691597 - 693015 + | integrase catalytic subunit TERM 305 693386 - 693438 + G 75 -9.7 -4.09864 | GGAGGCCTGCGTCGA GGGGATCGACCGCCGCGCCCG CCGCAAGCTCT CGGGCGCTGTGCTCGAGCCGC TTTTCACCAGTCGGT Hhal_0613 693168 - 693932 + | IstB ATP binding domain-containing protein Hhal_0614 694577 - 693978 - | IS3 ORF2 Hhal_0615 694867 - 694574 - | transposase IS3/IS911 family protein Hhal_0616 695609 - 694911 - | integrase catalytic subunit Hhal_0617 695926 - 695606 - | transposase IS3/IS911 family protein Hhal_0618 697186 - 696950 - | putative transcriptional regulator Hhal_0619 698150 - 697188 - | CRISPR-associated Cas1 family protein Hhal_0620 698575 - 698261 - | CRISPR-associated Cas2 family protein TERM 306 698478 - 698464 - G 79 -7.1 -4.46212 | opp_overlap 698472 GGCGGCAGTAGAAAA CGCTG TACTG CAGCG GCACGCCCCATTCCT Hhal_0621 699365 - 698568 - | hypothetical protein Hhal_0622 699660 - 699379 - | CRISPR-associated Cas2 family protein Hhal_0623 701042 - 699885 - | hypothetical protein Hhal_0624 701383 - 701072 - | CRISPR-associated protein VVA1548 family Hhal_0625 701616 - 702749 + | CRISPR-associated NE0113 family protein TERM 307 703261 - 703294 + G 74 -15.3 -3.06796 | gap 1, overlap 703263 GCCGGCGGAAGCCGA GGGCGCCGAGGCCCTC GAC GAGGCCCTCGG-GCTC TTCCATCGGCTCGGC Hhal_0626 702746 - 703816 + | hypothetical protein Hhal_0627 703813 - 706746 + | CRISPR-associated RAMP Crm2 family protein TERM 308 707459 - 707487 + G 72 -13.7 -3.14344 | opp_overlap 707456 CTAAGCAGGCAACCC TGCGCCTCGGCGG CGA CGGCCGCGGCGCG TTCATGAGCGCCGTC Hhal_0628 706750 - 707901 + | CRISPR-associated Cmr3 family protein Hhal_0629 707916 - 708830 + | CRISPR-associated RAMP Cmr4 family protein family protein Hhal_0630 708827 - 709216 + | CRISPR-associated Cmr5 family protein TERM 309 709886 - 709896 + G 70 -8.2 -3.83998 | GTATCCCGGCCGGCA GCGG TTT CCGC TTTCATATCCAGTGC Hhal_0631 709213 - 710424 + | CRISPR-associated RAMP Cmr6 family protein Hhal_0632 710421 - 711335 + | hypothetical protein Hhal_0634 713011 - 712133 - | hypothetical protein Hhal_0635 713310 - 713008 - | CRISPR-associated protein VVA1548 family Hhal_0636 713545 - 714075 + | hypothetical protein TERM 310 714777 - 714803 + T 100 -2.1 -5.75945 | opp_overlap 714776, overlap 714779 714786 TGGACCAGCACAAAG GACCCGGGACC CCAGT GCTTTCGGGGC TTTTTTTTACCCCGT Hhal_0637 716392 - 715691 - | hypothetical protein Hhal_0638 717255 - 716482 - | IstB ATP binding domain-containing protein Hhal_0639 718244 - 717264 - | hypothetical protein Hhal_0640 718798 - 718244 - | hypothetical protein TERM 311 718735 - 718775 + g 78 -14 -3.63991 | CGCTGCCCGGCTCCT GCTTGCACTCGAGGGCGT GCAGA ATGGCCTCGTGTGCGAGC TTGTTGGGGCTCATC Hhal_0641 719307 - 718801 - | hypothetical protein Hhal_0642 720382 - 719387 - | hypothetical protein Hhal_0643 721240 - 720419 - | cobyrinic acid a,c-diamide synthase TERM 312 721502 - 721526 + H 80 -14.3 -3.34005 | TGGCGGGCTCCGAAG GGGCCGGTG CTGGATC CACCGGCCC TTCTCCCACTTCCTT Hhal_0645 724626 - 726014 + | dihydrolipoamide dehydrogenase Hhal_0646 726020 - 726676 + | rhodanese domain-containing protein TERM 313 728292 - 728320 + G 73 -12.4 -3.53091 | gap 1, overlap 728313 728315 CGAGGAGCCGCAGGG CCGTGGGCCGGGA TCGA TCGCGGCCC-CGG TTTCGAACCGAGGGT Hhal_0647 726838 - 729210 + | multi-sensor hybrid histidine kinase Hhal_0648 729681 - 729259 - | hypothetical protein Hhal_0650 730185 - 731024 + | hypothetical protein Hhal_0651 732390 - 731041 - | DNA repair protein RadA TERM 314 731605 - 731563 - G 79 -15.5 -3.25823 | overlap 731566 GTGGCGTGACAGGAA GATCGAGGACGGGTTGCGC ACCTG GCGCAGGCCGTCCTCGGCC ATGGCAAAGACACCG TERM 315 731602 - 731566 - G 77 -18 -2.51547 | overlap 731563 GCGTGACAGGAAGAT CGAGGACGGGTTGCGC ACCTG GCGCAGGCCGTCCTCG GCCATGGCAAAGACA Hhal_0652 733484 - 732390 - | alanine racemase Hhal_0653 736777 - 733481 - | DnaB domain-containing protein TERM 316 734678 - 734692 + g 73 -10 -3.85698 | GGTCTCGGGAATGGT CAGGTC GTA GACCTG TTTGTGACCCAGCGG Hhal_0654 737262 - 736810 - | ribosomal protein L9 Hhal_0655 738183 - 737302 - | hypothetical protein Hhal_0656 738417 - 738193 - | ribosomal protein S18 Hhal_0657 738825 - 738466 - | ribosomal protein S6 Hhal_0658 739736 - 738921 - | RNA methyltransferase Hhal_0659 742270 - 739742 - | ribonuclease R TERM 317 739917 - 739935 + g 72 -8.8 -4.07568 | CCGGATCCGGATGGA GCGGCC TTGCCCC GGCCGC TTTTCGCGCGCCCCC TERM 318 742553 - 742577 + r 100 -19.3 -5.60993 | opp_overlap 742553 GCTCGGAAGCGAAAA CCCCCGGGAGG CCT CCTCTCGGGGG TTTTTTTATGGGCGA TERM 319 742577 - 742553 - R 100 -17.1 -4.27316 | opp_overlap 742553 GCTCGGAAGCGAAAA CCCCCGGGAGG CCT CCTCTCGGGGG TTTTTTTATGGGCGA TERM 320 742675 - 742625 - R 100 -21.2 -3.20382 | gap 2, opp_overlap 742669, overlap 742629 TTGGATACGGATCAA GACACCCCGCCACCGCCGACCGGC GCGGG GCCAGCCGGCGG-GGCGGGA-GCC GGCAGCGGCGGACGC TERM 321 742672 - 742629 - R 100 -23.9 -3.14134 | gap 1, opp_overlap 742669, overlap 742625 ATACGGATCAAGACA CCCCGCCACCGCCGACCGGC GCGGG GCCAGCCGGCGG-GGCGGGA GCCGGCAGCGGCGGA TERM 322 742682 - 742694 + r 71 -10.5 -3.66908 | overlap 742680 742669 GCGGGAGCCGGCAGC GGCGG ACG CCGCC TTCCTTTTAAAAGGG Hhal_0660 743996 - 742701 - | adenylosuccinate synthetase Hhal_0661 745177 - 743999 - | ATP phosphoribosyltransferase regulatory subunit TERM 323 745065 - 745041 - G 81 -12.2 -3.95148 | AGATACTCAATGAAA GGGGGCATGA TCAGC TCATACCCCC AGGAATCGAACAGAT Hhal_0662 745368 - 745177 - | hypothetical protein TERM 324 745296 - 745278 - G 100 -17.4 -4.25104 | opp_overlap 745277 CGGCCTGCAGGAAAA CCCGGCGC AGA GCGCCGGG GTTCGCTGCAGGTAG Hhal_0663 746301 - 745393 - | HflC protein Hhal_0664 747488 - 746301 - | HflK protein Hhal_0665 748911 - 747574 - | GTP-binding protein, HSR1-related TERM 325 747750 - 747698 - GR 78 -15.7 -2.78384 | gap 3, overlap 747700 747714 TGCTCTTCGATGACA CACCC-CAGCCGGAACAGCTGGGCGC GCAA GCGCCC--CTGGTCCGGCCGCAGGTG CACTCGGCGACGGAT TERM 326 747747 - 747700 - GR 71 -12.7 -2.94099 | gap 2, overlap 747698 747714 CTCTTCGATGACACA CCCCAGCCGGAACAGCTGGGCGC GCAA GCGCCC--CTGGTCCGGCCGCAG GTGCACTCGGCGACG Hhal_0666 749155 - 748883 - | RNA chaperone Hfq Hhal_0667 750168 - 749236 - | tRNA delta(2)-isopentenylpyrophosphate transferase Hhal_0668 752030 - 750168 - | DNA mismatch repair protein MutL TERM 327 751518 - 751468 - G 73 -10.3 -3.93695 | gap 1, overlap 751469 751472 TGGACGAGCGAGAAA CCGACGTCGAAGCGGCTCAGCGCC AGCC GGCGCAACGCCTCCTGGACGT-GG TAGAGCTCGGTGCGC Hhal_0669 753332 - 752040 - | N-acetylmuramoyl-L-alanine amidase Hhal_0670 753910 - 753443 - | hypothetical protein Hhal_0671 755436 - 753907 - | carbohydrate kinase, YjeF related protein Hhal_0672 755516 - 756583 + | putative iron-sulfur cluster binding protein Hhal_0673 756960 - 756580 - | aspartate 1-decarboxylase Hhal_0674 757922 - 757065 - | pantoate--beta-alanine ligase Hhal_0675 758746 - 757919 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase Hhal_0676 759379 - 758837 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Hhal_0677 760611 - 759376 - | poly(A) polymerase Hhal_0678 761002 - 761475 + | RDD domain-containing protein TERM 328 761573 - 761616 + T 80 -8.8 -4.36914 | gap 1, opp_overlap 761583, overlap 761583 AGCGGCGCAGCCCGA GC-GGGGAAAAGCGCCGACGC CAG GCGTCGGCGCTTTTAGCGAGG TTTTGTCCGAGCGAA TERM 329 761583 - 761605 + T 100 -20.6 -4.10855 | opp_overlap 761583, overlap 761573 CCCGAGCGGGGAAAA GCGCCGACGC CAG GCGTCGGCGC TTTTAGCGAGGTTTT TERM 330 761605 - 761583 - T 100 -20.6 -4.09685 | opp_overlap 761573 761583 CCCGAGCGGGGAAAA GCGCCGACGC CAG GCGTCGGCGC TTTTAGCGAGGTTTT TERM 331 761756 - 761733 - T 71 -10.2 -3.57561 | gap 1 CCCCAACCGCCCAAA GGCGCCGGCAG ACC CAGC-GGCGCC AATACCCGACAGCAA Hhal_0679 762828 - 761776 - | permease YjgP/YjgQ family protein Hhal_0680 763946 - 762828 - | permease YjgP/YjgQ family protein TERM 332 763902 - 763859 - G 70 -13 -3.39286 | gap 1, overlap 763857 763862 ACAGGACCGCAAAGA GCACGGCGAGCACGGCCAGGG CCG CCCCGGCCGC-CTCGCGGACC AGATAGCGATCGATG TERM 333 763899 - 763862 - G 80 -17.7 -2.85297 | gap 1, overlap 763857 763859 GGACCGCAAAGAGCA CGGCGAGCACGGCCAGGG CCG CCCCGGCCGC-CTCGCGG ACCAGATAGCGATCG TERM 334 764102 - 764090 - g 72 -4.7 -4.43012 | opp_overlap 764100 AGCTCAAGACCAAAA GCGGG GAT CCGGC GCGGCAGCGCACCGC TERM 335 764776 - 764757 - g 74 -15 -3.09492 | GGCGGAACTCGAAGA GCAGGGCC TGGC GGCCCTGC TGGCCGTGGCCCGCG Hhal_0681 764071 - 765570 + | leucyl aminopeptidase Hhal_0682 765576 - 765998 + | DNA polymerase III chi subunit, HolC Hhal_0683 765995 - 766477 + | hypothetical protein TERM 336 769142 - 769116 - g 85 -10.9 -4.30719 | CGCGCCGAGAAGAAA CTCGGCAACGA GAGCT TCGTCGCCAAG GCCCCGGCCGAGGTG valS 766491 - 769244 + | valyl-tRNA synthetase TERM 337 769262 - 769299 + T 84 -17 -2.87564 | opp_overlap 769253 AATCAATTGCGGATC GCCGTGCCGTGCCCTG CCATCA CAGGGTGCGGCACTGC TCTCTCAAGGCCTCA Hhal_0685 769640 - 769281 - | hypothetical protein Hhal_0686 769923 - 769633 - | DNA polymerase beta subunit Hhal_0687 770458 - 769985 - | ribosomal-protein-alanine acetyltransferase Hhal_0688 770802 - 770497 - | hypothetical protein Hhal_0689 771741 - 770857 - | phage SPO1 DNA polymerase-related protein Hhal_0690 773295 - 771745 - | 2-isopropylmalate synthase TERM 338 773498 - 773452 - R 93 -20.1 -2.70932 | gap 1 GGGCGTTGCTAAGCA GCCGCACGCCC-CCGGCACCGC TGCA GCGAAGCCAGCGGGCGTGGGGC GCGGGGTTGGACGGG Hhal_0691 774317 - 773568 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 339 773899 - 773864 - G 72 -14.6 -2.92668 | overlap 773859 GATCACCGAACCAGA CCAGGCCGACCACCGC GCCA GCGGCCGCCGGACTGG GCAGCCCCTGGAAGT Hhal_0692 774759 - 774310 - | rhodanese domain-containing protein TERM 340 774767 - 774819 + r 100 -21.2 -3.06183 | gap 2 TCGGTCATGGGGCTC CCGGCG-CCGCCGGCGG-GCGAACCC CGG GGGGCCGCACCGCCGGCGCACGCTGG TTCAGTCGCGGTCGA Hhal_0693 775831 - 774821 - | ketol-acid reductoisomerase TERM 341 774919 - 774947 + g 82 -13.7 -3.78934 | overlap 774929 CGGCGGCCAGACGGC GGCGGGCGTGCAG GGT CGGCGCGCCGGCC TTGTTCTCCAGCACG Hhal_0694 776392 - 775898 - | acetolactate synthase 3 regulatory subunit Hhal_0695 776545 - 777009 + | hypothetical protein Hhal_0696 777756 - 777166 - | hypothetical protein TERM 342 777792 - 777773 - R 71 -7.8 -4.07687 | overlap 777776 AGGCCCTCCTCAAAA CACGCTGC AAGA GCAGCCTG CAACCGACATCAGTC Hhal_0697 780720 - 777802 - | hypothetical protein TERM 343 780672 - 780633 - G 90 -13.4 -4.03234 | overlap 780661 780662 GGCTCTCCACAGAAA GCGGGGCAGGCGCGCTGG GCGA CCAGAACGCCCCCGCCGC GGCCAGGAGCCAAAC Hhal_0698 781606 - 780740 - | hypothetical protein TERM 344 781233 - 781215 - G 82 -11.6 -4.19238 | GTCCGAACGGCAAAA CGGGCGCG ATA CTCGCCCG GATCGATCTCATCCG Hhal_0699 782852 - 782418 - | hypothetical protein Hhal_0700 783214 - 785154 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Hhal_0701 785255 - 786961 + | prolyl-tRNA synthetase Hhal_0702 786937 - 787815 + | NAD-dependent epimerase/dehydratase Hhal_0703 788124 - 787846 - | acylphosphatase Hhal_0704 789476 - 788121 - | putative ribonuclease BN Hhal_0705 789511 - 790173 + | flavodoxin/nitric oxide synthase TERM 345 790199 - 790211 + GT 75 -10.5 -3.93236 | GACCCTGCACGGCAT CGCGG TCA CCGCG TTTGTCGGCTTGGTG Hhal_0707 791199 - 790474 - | chromosomal replication initiator, DnaA Hhal_0706 790170 - 790547 + | putative transmembrane protein Hhal_0708 791373 - 792092 + | hypothetical protein Hhal_0709 793280 - 792114 - | hypothetical protein Hhal_0710 793440 - 794483 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 346 794651 - 794599 - g 86 -18.4 -3.14132 | gap 1, overlap 794552 CTGCGTGCTCAGCAA CCGGGCGGATGCCTACGGCCTGCAG CGCG CCG-AGGCCGCGGGCATCCCCACGG CGGTCGTCGATCACC Hhal_0711 794480 - 795148 + | phosphoribosylglycinamide formyltransferase TERM 347 795268 - 795316 + F 73 -5.9 -4.36914 | gap 1, overlap 795270 CGAGCAGCGCAGCCC CGACGGGGGTTCAGCGCGAACC TTTGCT GGTTCGCGCTGA-TCAGCGAGG TTTTGTCCGAGCGGC Hhal_0712 795611 - 796378 + | hypothetical protein dcd 796957 - 796388 - | deoxycytidine triphosphate deaminase Hhal_0714 798417 - 797068 - | magnesium transporter Hhal_0715 798853 - 799716 + | bacitracin resistance protein BacA Hhal_0716 800581 - 799826 - | hypothetical protein Hhal_0717 800621 - 802660 + | methionyl-tRNA synthetase Hhal_0718 804246 - 802972 - | peptidase S1 and S6, chymotrypsin/Hap Hhal_0719 804358 - 805440 + | electron transport complex, RnfABCDGE type, A subunit Hhal_0720 805472 - 807517 + | electron transport complex, RnfABCDGE type, C subunit Hhal_0721 807547 - 808491 + | electron transport complex, RnfABCDGE type, D subunit Hhal_0722 808488 - 809162 + | electron transport complex, RnfABCDGE type, G subunit Hhal_0723 809159 - 809803 + | electron transport complex, RnfABCDGE type, E subunit Hhal_0724 809793 - 810434 + | endonuclease III Hhal_0725 811739 - 810528 - | argininosuccinate synthase Hhal_0726 812672 - 811770 - | ornithine carbamoyltransferase Hhal_0727 813871 - 812702 - | acetylornithine aminotransferase TERM 348 813629 - 813605 - G 100 -10.7 -4.84359 | gap 1, opp_overlap 813628 GGAGTTGCAGAAAAA CGCCGC-GCC CATCCC GGCGGCGGCG CACAGGCGCTCGGCC Hhal_0728 814662 - 813982 - | ribonuclease T Hhal_0729 815069 - 814734 - | glutaredoxin-like protein Hhal_0730 816209 - 815172 - | dihydroorotase TERM 349 817034 - 817089 + G 71 -11.3 -3.55563 | gap 3 CGATGCCGAACCTGC CCGACGCGGAGAG--CTGGCGAGTTCGG ACG CTGA-TTCGCCGGATCTCTCCGTATCGG TTTCGCCCCTCCCAT Hhal_0731 816978 - 817478 + | hypothetical protein Hhal_0732 817708 - 819075 + | sigma-54 dependent trancsriptional regulator Hhal_0733 819072 - 820175 + | hypothetical protein Hhal_0734 823833 - 820192 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 350 820332 - 820372 + g 72 -13.2 -3.15544 | GCCCGCACGCCGCAT CCG-CGCCGCCGGCCAGCCC GAA GGGC-GGTACGCGGCGGCGG TTCATCAGCGTCACC TERM 351 822150 - 822118 - G 78 -13.3 -3.54424 | GTGCAGCCGGGCAAA GGCCGCGTCGACCTC GGC GACGTCGTCGCTGCC GGGGACCTCGAGCGC TERM 352 822580 - 822559 - G 83 -15.1 -3.59262 | GGCGATACGCCGAAA GCCGGCGGC CACC GCCACCGGC TCCCGGGCATCCCCG Hhal_0736 824756 - 824151 - | alkaline phosphatase TERM 353 824935 - 824891 - H 100 -27.1 -3.31144 | overlap 824870 824892 GCGGCAGGCGCAGAA CGCCGCCCTGCGGGCCCGGCA CCC CGCCGGGCCCGCAGGGCGTTA CGCCGGCGCAGCACT TERM 354 824934 - 824892 - H 100 -28.4 -2.58544 | overlap 824870 824891 CGGCAGGCGCAGAAC GCCGCCCTGCGGGCCCGGCA CCC CGCCGGGCCCGCAGGGCGTT ACGCCGGCGCAGCAC TERM 355 826613 - 826587 - H 100 -23 -2.90723 | GTATCGGCAAGGACA GGCCCGCCCGGC AGC GCCGGGCGGACC GCATCGGGAGCATCC Hhal_0737 826631 - 827026 + | hypothetical protein Hhal_0738 827023 - 827727 + | peptidase C39, bacteriocin processing Hhal_0739 827730 - 828245 + | hypothetical protein Hhal_0740 829448 - 828261 - | hypothetical protein Hhal_0741 830503 - 829445 - | hypothetical protein Hhal_0742 831851 - 830613 - | hypothetical protein TERM 356 832227 - 832238 + H 75 -7.2 -4.40358 | CCGTACACCGGAGTT GGCG CGCC CGCC TTTTCTGGCCTCGCT TERM 357 832288 - 832278 - H 81 -4.6 -4.8622 | overlap 832280 GGTGTCAATCAAAAA CACG CGG CGCG CCCTCCTGATCATCG Hhal_0744 832520 - 832828 + | hypothetical protein Hhal_0745 832825 - 833298 + | hypothetical protein Hhal_0746 834523 - 833369 - | phage integrase family protein Hhal_0748 834970 - 835224 + | hypothetical protein TERM 358 835495 - 835553 + G 82 -10.9 -4.20516 | gap 1, opp_overlap 835518 CCCTCTTGAACAAGT GCCCGCCGCATTCCGCGACTCAATTCCC GTCA GGGAAT-GAGTCGTCGGTCAAGGCGGGC TTTCTTGGCTGAGGA Hhal_0749 835221 - 835565 + | hypothetical protein Hhal_0750 835909 - 837141 + | IS605 family transposase OrfB Hhal_0751 837177 - 837296 + | hypothetical protein Hhal_0752 837504 - 837824 + | hypothetical protein Hhal_0753 837986 - 838324 + | DNA polymerase beta subunit Hhal_0755 838797 - 839168 + | DNA polymerase beta subunit Hhal_0756 839390 - 839623 + | MarR family transcriptional regulator Hhal_0757 839671 - 840351 + | hypothetical protein Hhal_0758 840678 - 841052 + | MarR family transcriptional regulator TERM 359 841195 - 841216 + G 73 -10.1 -3.88291 | opp_overlap 841194 GCTGCTCGAGACCAT CGGCGTCGC CTCG GTGATGCCG TTTCTCAGCGTCCTC TERM 360 842762 - 842748 - g 70 -4.2 -4.4891 | overlap 842749 TGCACCACCAGAAAA CGGTGA TCC TCATCG CCCACCGCCTCTCCA Hhal_0759 841097 - 842899 + | ABC transporter related Hhal_0760 843209 - 844501 + | EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Hhal_0761 844489 - 845430 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 361 846018 - 846001 - g 70 -4.1 -4.43307 | TTTTTAAGAAAACAA CCTAGCA TGTC TCCTAGG GTAAGTTCTTTTAAT Hhal_0762 845674 - 846594 + | hypothetical protein Hhal_0763 846658 - 847587 + | glycosyl transferase family protein Hhal_0764 848793 - 848128 - | RNA-directed DNA polymerase (reverse transcriptase) Hhal_0765 849681 - 848866 - | integrase catalytic subunit Hhal_0766 850022 - 849729 - | transposase IS3/IS911 family protein Hhal_0767 850103 - 850213 + | transposase and inactivated derivatives Hhal_0768 851769 - 850711 - | transposase IS116/IS110/IS902 family protein Hhal_0769 852088 - 853077 + | UDP-glucose 4-epimerase TERM 362 853661 - 853647 - g 79 -2.8 -4.88687 | TTAAACAAAAAACAA CATTCA TAC CGAACG GGGTTGATATAGATC TERM 363 853878 - 853866 - g 100 -7.7 -5.40873 | overlap 853868 AAGACAAAAACAAAA TCGAG TCT CTCGA CACAAAGAACGTGAG Hhal_0770 853130 - 854263 + | glycosyl transferase, group 1 TERM 364 854943 - 854921 - f 70 -2.1 -4.62069 | gap 1, overlap 854926 TCGTTATCTTAAAAA TAACACACGG ACTA CCGT-TATTA AGATTGATGGCACAC Hhal_0771 855103 - 858171 + | hypothetical protein Hhal_0772 858168 - 858806 + | peptidase C26 Hhal_0773 858803 - 859552 + | nucleotidyl transferase Hhal_0774 859583 - 861247 + | hypothetical protein Hhal_0775 861244 - 862212 + | hypothetical protein Hhal_0776 862209 - 862448 + | hypothetical protein Hhal_0777 862450 - 863604 + | glycosyl transferase, group 1 TERM 365 863822 - 863836 + G 70 -9.2 -3.92522 | AGCGTGATTGGCGGC GGCGCG CAG CGCGTC TTTGTCACATTGGCA TERM 366 864290 - 864316 + G 75 -5.1 -4.56597 | gap 1, opp_overlap 864291, overlap 864291 864295 CTGGACTTTCAAGCG ATCGAGCGCACG ACGG CG-GCGCTTGAC TTTTTGCCCCGGCCA Hhal_0778 863690 - 864871 + | glycosyl transferase, group 1 TERM 367 864959 - 864994 + F 70 -6.1 -4.28254 | CCTAATCATTAATTC CCGCAACATCTATCC CACTCA GGGTAAGCGTTGCGG TTTTGAATATTGAGC TERM 368 865118 - 865132 + G 77 -3.5 -4.69435 | GCCTTTTTTTTCTAG GTGGG TTGTT CCTAC TGTTTTTTTTATTGG Hhal_0779 864997 - 866301 + | hypothetical protein Hhal_0780 866492 - 867601 + | glycosyl transferase, group 1 Hhal_0781 867598 - 868884 + | hypothetical protein Hhal_0782 869031 - 869855 + | glycosyl transferase family protein Hhal_0784 872330 - 870642 - | transposase, IS4 family protein Hhal_0786 873466 - 873083 - | hypothetical protein Hhal_0787 873571 - 873741 + | hypothetical protein Hhal_0788 874134 - 874421 + | prevent-host-death family protein Hhal_0789 874405 - 874791 + | PilT domain-containing protein Hhal_0790 874834 - 875223 + | hypothetical protein Hhal_0791 875339 - 875569 + | hypothetical protein TERM 369 875730 - 875754 + GT 71 -10.8 -3.60074 | gap 1 CATGCCCGAGGGACA GCGT-CGCGAA GACC TTCGCGCACGC TTTGAGACCTTTATC Hhal_0793 876175 - 875921 - | addiction module antitoxin Hhal_0792 875566 - 876033 + | nucleic acid binding protein Hhal_0794 876423 - 876172 - | prevent-host-death family protein Hhal_0795 877303 - 877016 - | PilT protein-like protein Hhal_0796 877664 - 877425 - | virulence-associated protein VapB-like protein TERM 370 877623 - 877653 + g 75 -5.2 -4.63218 | overlap 877624 CCTGACGGCCTGATT CCGCCCGTTACGGA AGA TCCGGACCGTGCGC TTTTCTTCCACGACA Hhal_0797 878041 - 878916 + | hypothetical protein TERM 371 879502 - 879482 - g 89 -2.6 -5.24129 | gap 2, overlap 879483 879484 GCTTCCCAGAAAAAA CGGCTCGCCA GGG TGGCGA-C-G TTGACACCTGGCTCC Hhal_0798 878917 - 879867 + | glycosyl transferase family protein Hhal_0799 879860 - 881257 + | O-antigen polymerase TERM 372 881503 - 881485 - T 82 -5.9 -4.81249 | overlap 881489 TTGGAAATTTAAAAA GGAGCCT GTTCG AGGCGCC CCGATCAAGGAAATT Hhal_0800 882991 - 882113 - | hypothetical protein Hhal_0801 883883 - 883053 - | hypothetical protein Hhal_0802 883969 - 884778 + | Mn2+-dependent serine/threonine protein kinase Hhal_0803 885348 - 884800 - | dual specificity protein phosphatase TERM 373 885286 - 885274 - G 72 -3.3 -4.57073 | CACCGTCTGGAAAAA CGCCT GCC AGCCG TTGAGGAATGCCCCC Hhal_0804 885420 - 886271 + | Mn2+-dependent serine/threonine protein kinase Hhal_0805 887134 - 886268 - | Mn2+-dependent serine/threonine protein kinase TERM 374 888051 - 888072 + G 77 -11.5 -3.86897 | overlap 888052 TCGAGGACGACGACT GGGGCGTGG GCCT CCACGCCCG TTTCTAGGCGCTGAC TERM 375 888052 - 888071 + G 72 -15 -2.91924 | overlap 888051 CGAGGACGACGACTG GGGCGTGG GCCT CCACGCCC GTTTCTAGGCGCTGA Hhal_0806 887234 - 888079 + | phosphoesterase, PA-phosphatase related TERM 376 888284 - 888246 - g 89 -2.8 -5.29445 | opp_overlap 888246 888257, overlap 888247 888257 GGCGAAGAAGAAAAA GGCCGAGCCAACGCCCTC TTG GTGGGCGTTTCGGCGGCT CTTTGTCCACTACGC Hhal_0807 888178 - 889995 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Hhal_0808 890059 - 891141 + | glycosyl transferase family protein TERM 377 892307 - 892362 + G 73 -7.5 -4.13767 | gap 3 ATGGACACCGAGCAC CTGGTGGCCT-T-CC-CCGCCGACGGCG AGG TGCAGGCGGCGGTGGAACAGCCCACCCG TTTTCCGGTCCGCGC Hhal_0809 891266 - 892393 + | ABC transporter related TERM 378 892852 - 892831 - g 73 -9.5 -3.93369 | gap 1 CCAATGTGAATGAAA TCCTCGACCG CAT CGGT-GAGGA CGGCTACCTGACCGC Hhal_0810 892464 - 893771 + | hypothetical protein Hhal_0811 895444 - 893768 - | NADH/ubiquinone/plastoquinone (complex I) TERM 379 893849 - 893822 - G 77 -14.8 -3.23692 | overlap 893825 CACCAGCAGCAGGAA CAGCGCCCCGGC CATG GCCAGGGCGATG AGCCGCCCCTCCACC TERM 380 893928 - 893898 - G 87 -19.6 -3.06302 | ACCACCGCCAGCGAA GGCGCCGGCGGGCG CGC CGGCAGCCGGCGCC AGGCGCGGCGGCTGG Hhal_0812 896952 - 895441 - | NADH dehydrogenase (quinone) Hhal_0813 898412 - 896949 - | NADH dehydrogenase (quinone) Hhal_0814 898718 - 898416 - | NADH-ubiquinone oxidoreductase, chain 4L Hhal_0815 899680 - 898715 - | hypothetical protein Hhal_0816 899982 - 899677 - | putative monovalent cation/H+ antiporter subunit G Hhal_0817 900245 - 899982 - | multiple resistance and pH regulation protein F Hhal_0818 900795 - 900262 - | hypothetical protein TERM 381 900583 - 900562 - G 71 -10.1 -3.75024 | GCGGACCAGGAAGAA GCCGGCG AAGCGCAG CGCCGGC AGGGGGTACCAGGGG Hhal_0819 901915 - 900800 - | ferrochelatase Hhal_0820 902095 - 902547 + | protein tyrosine phosphatase Hhal_0821 903871 - 902573 - | peptidase M48, Ste24p Hhal_0822 904844 - 903924 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Hhal_0823 904972 - 905676 + | electron transport protein SCO1/SenC Hhal_0824 905673 - 906551 + | phosphatidylserine decarboxylase TERM 382 906710 - 906700 - T 70 -2.4 -4.60924 | GAAACTCGGCAAAAA CCGC CTG GAGG GCTCGCAGGTCGCCT Hhal_0825 907146 - 906724 - | DNA polymerase beta subunit Hhal_0826 908128 - 907454 - | methyltransferase type 11 Hhal_0827 909446 - 908178 - | aminotransferase class-III TERM 383 909492 - 909511 + r 84 -16.4 -2.89683 | TGGCCGTTGACTGCT GGGCCGCC GCGC GGCGGCCC TCTCTGGACTAAACT Hhal_0828 910955 - 909525 - | beta-lactamase domain-containing protein Hhal_0829 912140 - 910971 - | 3-isopropylmalate dehydrogenase Hhal_0830 913156 - 912176 - | malate dehydrogenase Hhal_0831 913995 - 913198 - | hypothetical protein TERM 384 914004 - 913968 - G 77 -14.5 -3.22777 | gap 1, opp_overlap 914002, overlap 913966 913969 CGGTATAGAGGAAGA CGGCACCGGGGTGAGC GCGCTG GTTCACCCCGGTGC-G CAAGGCGTTACGCCT Hhal_0832 914428 - 914012 - | ribosomal protein L17 Hhal_0833 915447 - 914449 - | DNA-directed RNA polymerase subunit alpha Hhal_0834 916096 - 915473 - | ribosomal protein S4 Hhal_0835 916508 - 916113 - | 30S ribosomal protein S11 TERM 385 916600 - 916637 + r 81 -15.5 -3.02511 | overlap 916602 916614 GGCTGGCGGGGCCCC GACGCGGACCCTTGCGC GTAC GCGCGTTGGTCTGCGTC TGTTGCCCGCGTACC rpsM 916939 - 916580 - | 30S ribosomal protein S13 Hhal_0837 917123 - 917010 - | ribosomal protein L36 TERM 386 917199 - 917220 + r 76 -5.8 -4.4715 | opp_overlap 917186 TACCAGTCCACGCGC CTGGGTGC CACCCC GCAGCCAG TTTTATCGATTCAGC secY 918535 - 917231 - | preprotein translocase subunit SecY Hhal_0839 919016 - 918576 - | ribosomal protein L15 Hhal_0840 919205 - 919017 - | ribosomal protein L30 Hhal_0841 919711 - 919208 - | ribosomal protein S5 Hhal_0842 920083 - 919730 - | ribosomal protein L18 TERM 387 920021 - 920072 + g 73 -10.1 -3.84639 | gap 2 GAGCCGGTAGGCACC GACGTCGCGGATGC-GCCCGCG-GC TCTT GCGCGCGCGCCGCATGCGTGCTGTC TTCTTGTCCATCTTC Hhal_0843 920632 - 920099 - | ribosomal protein L6 TERM 388 920351 - 920310 - G 93 -16.6 -3.85817 | gap 1 ACCGGGTGCGAGAAA CCGAGCGTCAGGTTCAGGG TGCTG CCCTGGACCTG-CGCGCGG TAGCCGACGCCCTTG Hhal_0844 921043 - 920648 - | ribosomal protein S8 Hhal_0845 921360 - 921055 - | ribosomal protein S14 rplE 921920 - 921381 - | 50S ribosomal protein L5 Hhal_0847 922248 - 921931 - | ribosomal protein L24 TERM 389 921997 - 922011 + g 77 -11.4 -3.95073 | CCCCTCCTGGCGGAC GCCGAC GCG GTCGGC TTTCTCCGTCTCGGG Hhal_0848 922628 - 922260 - | ribosomal protein L14 Hhal_0849 922944 - 922684 - | ribosomal protein S17 Hhal_0850 923144 - 922941 - | ribosomal protein L29 rplP 923557 - 923144 - | 50S ribosomal protein L16 TERM 390 923500 - 923516 + g 75 -5 -4.56133 | overlap 923486 CACCGCGGGTCGCGA GGCCCG AGCAG CGGCCC TTTTGCTTCTTGCGG TERM 391 923586 - 923626 + r 71 -9.4 -3.70676 | overlap 923587 923614 CCGTCCGCTCAGCCC TGGGCAGCCGCGGCGCGC TTGAC GCGCTCGGCGGGGGCCCC TTCGTTTTCGGTGTC rpsC 924265 - 923579 - | 30S ribosomal protein S3 Hhal_0853 924623 - 924291 - | ribosomal protein L22 Hhal_0854 924911 - 924636 - | ribosomal protein S19 TERM 392 924795 - 924834 + g 71 -10 -3.68222 | gap 1, overlap 924798 CATGTCCGGCATCAC CACCGAGCGGCGCGACCAG GTC TTGATCG-GCCGCTTGCTG TTGTTGGCATTCGCC rplB 925749 - 924925 - | 50S ribosomal protein L2 Hhal_0856 926058 - 925762 - | ribosomal protein L25/L23 Hhal_0857 926672 - 926055 - | ribosomal protein L4/L1e TERM 393 926450 - 926472 + g 75 -10.4 -4.07568 | overlap 926451 926452 GGCTGCGGATGGTGC CGGCCCGGGC GTT GCCCGTGCCC TTTTGACGCCAGGGC Hhal_0858 927341 - 926691 - | ribosomal protein L3 TERM 394 927309 - 927299 - G 72 -3.2 -4.56597 | overlap 927301 927302 CTTCTTCGGTAAAAA CACG CGT CATG CCGCGCTTGCGACCG TERM 395 927456 - 927399 - R 100 -22.5 -3.18366 | opp_overlap 927413, overlap 927397 CCGGGAACGAATAGA CTCCGGCGGGCGCACGGCGCGCAGCCC CGTG GGGCGGCCTGCCGTTTGCCGGCCGGAG CGCCGGTCACCGCCG TERM 396 927413 - 927442 + r 78 -12.7 -3.53012 | opp_overlap 927397 927399 ACTCCGGCGGGCGCA CGGCGCGCAGCCC CGTG GGGCGGCCTGCCG TTTGCCGGCCGGAGC TERM 397 927508 - 927545 + r 85 -16.3 -3.14564 | opp_overlap 927508, overlap 927490 927538 CGACGTGTCAGTAGA GCTTGATCTGGACGTCG ACAC CGGCGGCCAGGTCGAGC TTCATCAGCGCGTCG Hhal_0859 927829 - 927500 - | 30S ribosomal protein S10 TERM 398 927791 - 927803 + g 71 -2.6 -4.66938 | CGCCTTCAGCCGGAT CCGG ATACG CTGG TTTTGTGTTGCCGCT Hhal_0860 929026 - 927836 - | elongation factor Tu TERM 399 928162 - 928199 + g 70 -12.7 -3.29144 | gap 1, overlap 928156 CCTGGCCGCGCTCGA CGTCGTCGCGCTTGATGC CAC GCAGC-AGCGCGCCGATG TTATCACCGGCCTCA TERM 400 929072 - 929093 + r 74 -10.1 -3.75105 | opp_overlap 929071 CGTCTGAAACTGAAC GGCGACGTA CGTT TACGACGCC TTCTTGATCACTTCA Hhal_0861 931180 - 929084 - | translation elongation factor G TERM 401 930080 - 930113 + g 71 -10.3 -3.68222 | CTCCTCACGCTGGTT GGAGTGCATCTGC AACAGACG GCCGATGCGCTCC TTCTTCCCCTTGACC Hhal_0862 931683 - 931216 - | 30S ribosomal protein S7 rpsL 932073 - 931696 - | 30S ribosomal protein S12 TERM 402 932129 - 932104 - R 100 -20.5 -4.67353 | opp_overlap 932122 932125 GTACCGACCCAAAAA CGACAGGCCGG ATGG CCGGCCTGTCG AAGACGCGGCATTCT TERM 403 932196 - 932174 - R 89 -18.4 -2.90075 | opp_overlap 932170 932195 CCCTTGTCAATGACA CGCCCCGGGA CCA CCCCGGGGCG CACGGCTTGCGTTAC Hhal_0864 936585 - 932224 - | DNA-directed RNA polymerase subunit beta' Hhal_0865 940834 - 936689 - | DNA-directed RNA polymerase, beta subunit TERM 404 941020 - 940979 - R 91 -17.9 -3.21099 | opp_overlap 940982, overlap 940981 940982 GTGGTGCAGTATCAA CAGGCGAAGGCCGGCGGCC TCTT GGCCGCCAGCCCGCGCTTA CATCCGCTTGGACGG TERM 405 941018 - 940981 - R 89 -18.3 -3.17051 | opp_overlap 940982, overlap 940979 940982 GGTGCAGTATCAACA GGCGAAGGCCGGCGGCC TCTT GGCCGCCAGCCCGCGCT TACATCCGCTTGGAC TERM 406 940982 - 941017 + r 88 -17.4 -3.07994 | opp_overlap 940981 940979 940982 GTGCAGTATCAACAG GCGAAGGCCGGCGGCC TCTT GGCCGCCAGCCCGCGC TTACATCCGCTTGGA TERM 407 941017 - 940982 - R 100 -21.8 -2.50016 | opp_overlap 940982, overlap 940981 940979 GTGCAGTATCAACAG GCGAAGGCCGGCGGCC TCTT GGCCGCCAGCCCGCGC TTACATCCGCTTGGA Hhal_0866 941436 - 941050 - | ribosomal protein L7/L12 rplJ 942028 - 941501 - | 50S ribosomal protein L10 TERM 408 942266 - 942307 + r 91 -16.5 -3.53012 | gap 1, opp_overlap 942243 942245 CCGGCGTCCGTGCCG GCCAGGTC-CGGCGGGCCGC TAC GCGGCCCGCCGAGATTCCGC TTTACACCCCGAGGG Hhal_0868 943004 - 942309 - | ribosomal protein L1 Hhal_0869 943439 - 943008 - | ribosomal protein L11 TERM 409 943503 - 943524 + r 81 -2.9 -5.03314 | gap 1, overlap 943507 TGGGGTGAGACGCGC CG-GACGGCG CGC CGCGGTTACG TTTTTTCGACCTGGC Hhal_0870 944053 - 943520 - | NusG antitermination factor secE 944467 - 944057 - | preprotein translocase subunit SecE TERM 410 944481 - 944451 - G 100 -26.2 -3.05596 | GACCCTGCTACCGAA GCGGTCCGGCGAGC CAT GCCCGCCGGACCGC GTCGTGAAGTTGGCA Hhal_0872 945816 - 944626 - | elongation factor Tu TERM 411 944952 - 944989 + g 70 -12.7 -3.29144 | gap 1, overlap 944946 CCTGGCCGCGCTCGA CGTCGTCGCGCTTGATGC CAC GCAGC-AGCGCGCCGATG TTATCACCGGCCTCA Hhal_0873 946903 - 946358 - | hypothetical protein Hhal_0874 947664 - 946900 - | pantothenate kinase Hhal_0875 948638 - 947661 - | biotin--acetyl-CoA-carboxylase ligase TERM 412 948706 - 948733 + r 100 -20.6 -4.34402 | opp_overlap 948706 GTTGGACAAAAAAAA CCCCCGGCGTCC TATG GGACGTCGGGGG TTTTGGTGTAGGAGC TERM 413 948733 - 948706 - R 100 -18.4 -5.93809 | opp_overlap 948706 GTTGGACAAAAAAAA CCCCCGGCGTCC TATG GGACGTCGGGGG TTTTGGTGTAGGAGC TERM 414 951365 - 951377 + r 70 -6.2 -4.2354 | AGGTTCTATTTCACT CCCC TCACC GGGG TTCTTTTCGCCTTTC Hhal_0876 955410 - 954208 - | tyrosyl-tRNA synthetase TERM 415 954350 - 954375 + g 72 -8.2 -4.07568 | ATGCGCAGCCCCTCG GAGGTCGAGC CCACGA GCCCGGCCTC TTTTAGGGCGGCGGC Hhal_0877 955554 - 957065 + | peptidase M23B anmK 957062 - 958186 + | anhydro-N-acetylmuramic acid kinase Hhal_0879 958576 - 958205 - | iron-sulfur cluster insertion protein ErpA Hhal_0880 959710 - 958676 - | N-acetyl-gamma-glutamyl-phosphate reductase Hhal_0881 959849 - 960274 + | hypothetical protein Hhal_0882 960859 - 960353 - | bacterioferritin Hhal_0883 961180 - 960908 - | BFD/(2Fe-2S)-binding domain-containing protein Hhal_0884 963517 - 961250 - | phosphoenolpyruvate-protein phosphotransferase PtsP Hhal_0885 964074 - 963529 - | NUDIX hydrolase Hhal_0886 964198 - 964881 + | HAD family hydrolase Hhal_0887 964866 - 965237 + | LrgA family protein Hhal_0888 965230 - 965961 + | LrgB family protein Hhal_0889 967479 - 965947 - | apolipoprotein N-acyltransferase Hhal_0890 968341 - 967466 - | CBS domain-containing protein Hhal_0891 968814 - 968350 - | hypothetical protein Hhal_0892 969890 - 968811 - | PhoH family protein Hhal_0893 971319 - 969895 - | tRNA-i(6)A37 thiotransferase enzyme MiaB Hhal_0894 971856 - 971356 - | phosphatidylglycerophosphatase A Hhal_0895 972827 - 971853 - | thiamine-monophosphate kinase Hhal_0896 973291 - 972824 - | NusB antitermination factor Hhal_0897 973761 - 973291 - | riboflavin synthase TERM 416 973336 - 973354 + g 71 -11.6 -3.62522 | CATCTCCAGGGCCGA GAGCGCCG CCT CGGCGCCC TTGTTGCCGGCCTTG Hhal_0898 974991 - 973858 - | GTP cyclohydrolase II TERM 417 974897 - 974942 + g 70 -14.7 -2.81642 | overlap 974936 TTCTCCCGGTCTTCG TCATCGAGGACGACCGCCATG CGCC CCTGGCGCAGGTCCTCGATGA TCTCCTCGATACTGT Hhal_0899 975643 - 974984 - | riboflavin synthase subunit alpha Hhal_0900 976763 - 975648 - | riboflavin biosynthesis protein RibD Hhal_0901 977217 - 976750 - | ATP-cone domain-containing protein Hhal_0902 978488 - 977238 - | glycine hydroxymethyltransferase TERM 418 978693 - 978741 + G 72 -5.9 -4.36914 | gap 1, overlap 978695 CGAGCAGCGCAGCCC CGGCGGGGGTTCAGCGCGAACC TTTGCC GGTTCGCGCTGA-TCAGCGAGG TTTTGTCCGAGCGGC Hhal_0903 978582 - 978797 + | hypothetical protein Hhal_0904 978955 - 979632 + | Hly-III family protein TERM 419 980673 - 980715 + G 74 -12.7 -3.60214 | gap 2, overlap 980673 980684 GACAGTGATCACCCT G-GGCGTCGG-GGTCACGCGG CAG CTGCGTGACCGCCGCCGCGGC TTGTATAGTTGACCT Hhal_0905 979663 - 980727 + | CaCA family Na(+)/Ca(+) antiporter Hhal_0906 980761 - 981306 + | lactoylglutathione lyase Hhal_0907 981309 - 981461 + | hypothetical protein Hhal_0908 982880 - 981465 - | peptidase M20 Hhal_0909 983418 - 982873 - | appr-1-p processing domain-containing protein TERM 420 983224 - 983203 - G 71 -11.5 -3.60098 | ATTGGGCAGGCCAAA GCCGGCGGT GATC ACCGCCTGC CCCGGCTGAATGGGC Hhal_0910 984303 - 983497 - | heat shock protein DnaJ domain-containing protein TERM 421 984976 - 985019 + G 71 -10.9 -3.61398 | gap 1 CGATCTGGTCGGCCT CGCCGAGCACCCTGCGCGCC TTCCC GGCGCGTCGGTTCCT-GGCG TTCTTCCGCAACCAC TERM 422 985733 - 985694 - g 85 -19.2 -3.01712 | GCGTGTCGCCGAACA GCTCGGCTGCCCGCCGCC GTGG GGCGGCGCGCAGCAGACC GCCGAGGCCGAAGCC Hhal_0911 984450 - 985793 + | amine oxidase Hhal_0912 985790 - 986554 + | hypothetical protein Hhal_0913 986551 - 987774 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 423 988020 - 988002 - g 74 -16 -2.78816 | overlap 988013 TGACCGCTGAGGAGA GCGGCGAG GAA CTCGCCGC CGGCGAGGCCCCCTG TERM 424 988430 - 988463 + G 82 -20.3 -2.62184 | gap 1 TCGCCGGCCATCGCC GCCGG-GGTCCGCCGC GCG GCGGCGGACCACCTGC TGATCTACGGCGACG Hhal_0914 987767 - 988663 + | MerR family transcriptional regulator TERM 425 989296 - 989256 - g 82 -15.4 -3.40403 | gap 2, opp_overlap 989272 CCGCTGGGACGAGAA GCTGGCCCCCTGCTGGCAGC CCG GC-GCC-GCCGGGGCCCAGC AGCGCCTGGAGCGGT Hhal_0915 988669 - 990102 + | deoxyribodipyrimidine photo-lyase Hhal_0916 990113 - 991000 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Hhal_0917 991084 - 991848 + | CRP/FNR family transcriptional regulator TERM 426 991938 - 991906 - T 100 -27.1 -4.00124 | GACGCCATAACGAAA GCCGCCCCACCCGGT GAC ACCGGATGGGGCGGC CGTCACGCCGTGGGC Hhal_0918 992979 - 991969 - | glyceraldehyde-3-phosphate dehydrogenase, type I Hhal_0919 993183 - 994343 + | methionine adenosyltransferase Hhal_0920 994376 - 995152 + | short-chain dehydrogenase/reductase SDR TERM 427 995351 - 995303 - T 73 -5.9 -4.36914 | gap 1, overlap 995305 GCCGCTCGGACAAAA CCTCGCTGA-TCAGCGCGAACC GGCAAA GGTTCGCGCTGAACCCCCGCCG GGGCTGCGCTGCTCG Hhal_0921 996324 - 995446 - | ketohexokinase Hhal_0922 996774 - 996382 - | HNH endonuclease Hhal_0923 997510 - 996893 - | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 428 998758 - 998725 - g 72 -14.5 -2.82635 | gap 1 ACCCCGAGGACTACA TCCACCGCATCGGCCG CAC CGGCCGCGGCGG-GGA CAGCGGCGAGGCGTG Hhal_0924 997740 - 998951 + | DEAD/DEAH box helicase domain-containing protein TERM 429 998989 - 998967 - T 80 -14.1 -3.36273 | overlap 998968 GGCCTGCAACACCAA CGGCCCGGC CCAGC GCCGGGCCA GAAGAGGGGGGTGTC TERM 430 998988 - 998968 - T 77 -15.4 -2.6155 | overlap 998967 GCCTGCAACACCAAC GGCCCGGC CCAGC GCCGGGCC AGAAGAGGGGGGTGT TERM 431 999024 - 998993 - T 86 -15.8 -3.28791 | opp_overlap 998995, overlap 998995 AGCGCCGGGCCAGAA GAGGGGGGTGTCGC CGCG GCGGCACCCCCCTT TTTCTTGGCCCGGAG TERM 432 998995 - 999022 + T 100 -20.6 -5.06414 | opp_overlap 998993 998995 CGCCGGGCCAGAAGA GGGGGGTGTCGC CGCG GCGGCACCCCCC TTTTTCTTGGCCCGG TERM 433 999022 - 998995 - T 93 -18.4 -3.21276 | opp_overlap 998995, overlap 998993 CGCCGGGCCAGAAGA GGGGGGTGTCGC CGCG GCGGCACCCCCC TTTTTCTTGGCCCGG Hhal_0925 1000315 - 999053 - | peptidase M42 family protein TERM 434 1001161 - 1001174 + G 78 -5.9 -4.56775 | opp_overlap 1001156 1001159, overlap 1001159 CGCCCTGAAACAGGT CTGCC CGCA GGCGG TTTTTGCCCCGGGAT TERM 435 1001410 - 1001430 + G 78 -12.5 -3.72695 | GCCGCGACTGGAACC CCGCCCGGA GGA TCCGGGCCG TTTCCTCCAGGGACT Hhal_0926 1000391 - 1001665 + | carbohydrate kinase, FGGY Hhal_0927 1002489 - 1001680 - | hypothetical protein Hhal_0928 1006188 - 1002505 - | hypothetical protein Hhal_0929 1007213 - 1006185 - | hypothetical protein Hhal_0930 1008226 - 1007210 - | hypothetical protein TERM 436 1007645 - 1007598 - G 71 -11.9 -3.53811 | gap 2 TCCAGGCGCCCGAAA CGCCGGGCCCGGGGCGCCCAGGC CGCC GCCAGAG-GCCCGAAGC-CGGCG GGCGCCCCGCGCCGG Hhal_0931 1008699 - 1008238 - | hypothetical protein Hhal_0932 1008880 - 1010238 + | adenosylmethionine--8-amino-7-oxononanoate transaminase Hhal_0933 1010281 - 1011003 + | hypothetical protein Hhal_0934 1013504 - 1011000 - | CheA signal transduction histidine kinases Hhal_0935 1013552 - 1014496 + | glutathione synthetase Hhal_0936 1014493 - 1015542 + | ApbE family lipoprotein Hhal_0937 1015539 - 1016405 + | TonB family protein TERM 437 1016985 - 1016963 - g 70 -14.8 -2.82023 | opp_overlap 1016971 1016979, overlap 1016960 TACCGACACCAACCA GCGCTGGCGC GCG GCGGCAGCGC AACTGGGTGTGGACA Hhal_0938 1016457 - 1017035 + | hypothetical protein Hhal_0939 1017028 - 1017456 + | Holliday junction resolvase YqgF Hhal_0940 1017453 - 1017965 + | phosphoribosyltransferase Hhal_0941 1017962 - 1018948 + | aspartate carbamoyltransferase catalytic subunit Hhal_0942 1018945 - 1020228 + | dihydroorotase, multifunctional complex type Hhal_0943 1020252 - 1021112 + | thioredoxin domain-containing protein Hhal_0944 1021917 - 1021135 - | lytic transglycosylase, catalytic Hhal_0945 1022079 - 1022765 + | alanine racemase domain-containing protein Hhal_0946 1022779 - 1023609 + | pyrroline-5-carboxylate reductase Hhal_0947 1023609 - 1024187 + | protein of unknown function YGGT Hhal_0948 1024276 - 1024581 + | hypothetical protein metX 1024649 - 1025797 + | homoserine O-acetyltransferase Hhal_0950 1025794 - 1026408 + | methionine biosynthesis protein MetW Hhal_0951 1026485 - 1027171 + | spermine synthase TERM 438 1028079 - 1028037 - g 74 -13.4 -3.29144 | gap 1, opp_overlap 1028033 CGAGGGCGGCTACAA CACCTCCGTGGTCGGCCGC TGCGCC GCGGCCCACCTCG-AGGCG CTGATGATGTAGGCT Hhal_0952 1027168 - 1028091 + | histone deacetylase superfamily protein Hhal_0953 1028101 - 1028547 + | hypothetical protein Hhal_0954 1028556 - 1029638 + | AFG1 family ATPase Hhal_0955 1029657 - 1030085 + | type IV pilus assembly PilZ Hhal_0956 1030082 - 1030252 + | hypothetical protein TERM 439 1030286 - 1030255 - T 87 -15 -3.68351 | overlap 1030235 1030256 CGGGCAGGACTGAAA CCGGCCCGGGGACC GCGC GGCCCCCGGGCCCC CTGCCTACGCCGGAA TERM 440 1030285 - 1030256 - T 89 -18.5 -2.80796 | overlap 1030235 1030255 GGGCAGGACTGAAAC CGGCCCGGGGACC GCGC GGCCCCCGGGCCC CCTGCCTACGCCGGA Hhal_0957 1030920 - 1030291 - | PEBP family protein Hhal_0958 1030988 - 1031452 + | hypothetical protein Hhal_0959 1032126 - 1031416 - | dethiobiotin synthase Hhal_0960 1033010 - 1032123 - | biotin biosynthesis protein BioC Hhal_0961 1033714 - 1033013 - | alpha/beta hydrolase fold Hhal_0962 1034919 - 1033711 - | 8-amino-7-oxononanoate synthase Hhal_0963 1035896 - 1034916 - | biotin synthase Hhal_0964 1035967 - 1036683 + | competence protein F ubiA 1037592 - 1036693 - | 4-hydroxybenzoate octaprenyltransferase Hhal_0966 1038178 - 1037582 - | chorismate lyase Hhal_0967 1040265 - 1038190 - | ATP-dependent DNA helicase RecG TERM 441 1039537 - 1039487 - G 78 -18.2 -2.78463 | gap 1 AGGCTCTGCAGCAGA CGCTG-GGCCAGCGCCTCGCCCT GGTCCA AGGGCGGGGCGCCGGCCTCCGAG CGGAGCGCCTGGCGC Hhal_0968 1040667 - 1040275 - | putative endoribonuclease L-PSP Hhal_0969 1042872 - 1040683 - | (p)ppGpp synthetase I, SpoT/RelA Hhal_0970 1043264 - 1042893 - | DNA-directed RNA polymerase, omega subunit Hhal_0971 1044527 - 1043301 - | putative oxygen-independent coproporphyrinogen III oxidase Hhal_0972 1045140 - 1044541 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 442 1044953 - 1044985 + g 80 -16.9 -3.14881 | overlap 1044941 TCGTCGGCGACCGCG GGCAGGCCGCTGCGC TCG GCGCAGTGGCGCGCC TTGATCAACGCATTC Hhal_0973 1045853 - 1045137 - | ribonuclease PH Hhal_0974 1046046 - 1047644 + | methyl-accepting chemotaxis sensory transducer Hhal_0975 1047726 - 1048607 + | hypothetical protein Hhal_0976 1048597 - 1049232 + | guanylate kinase Hhal_0977 1049722 - 1049279 - | ferric uptake regulator family protein TERM 443 1049634 - 1049617 - G 79 -4.7 -4.78237 | overlap 1049619 CACCGGAGAACAAAA GTCCGGC CAGG GCCAGCC GCTGCTGGGTCGGGC Hhal_0978 1049849 - 1051267 + | phospholipase D/transphosphatidylase Hhal_0979 1051275 - 1052750 + | FAD linked oxidase domain-containing protein Hhal_0980 1052747 - 1053652 + | VacJ family lipoprotein Hhal_0981 1053738 - 1053974 + | hypothetical protein Hhal_0982 1055074 - 1053971 - | ATP dependent DNA ligase TERM 444 1054231 - 1054263 + g 71 -11.1 -3.5764 | overlap 1054237 CATTCAGCAGGGGAT CGATGAGCGCCGCGC CGA GTTCGGCGCGCAGCG TTTCGCGGTCCAGTT Hhal_0983 1056962 - 1055088 - | deoxyxylulose-5-phosphate synthase TERM 445 1056655 - 1056640 - G 71 -11.8 -3.57144 | opp_overlap 1056642 1056642 TCGCGTACGGGGAAA CCGGCG GGAC CGCCGG CCTGGCGGATGCGGG Hhal_0984 1057938 - 1057036 - | methyltransferase type 11 TERM 446 1057338 - 1057298 - G 73 -7 -4.13767 | gap 3, overlap 1057299 1057323 TCGGGGATGGCAAAA CGACTGGCGACCAGCCACC ACGACA GGC-GCTGG-CGC-AGTCG CTCGGCAACCCGGGC TERM 447 1057717 - 1057755 + g 71 -11.7 -3.62597 | gap 2 GCCGGCCGTATCGGC GACC-AGCCGC-GCCAGCG CCG CGCTGGCCGCGTCCAGGTC TTCTTCCCCGGTCCA Hhal_0985 1058353 - 1058700 + | ribosomal subunit interface protein, putative Hhal_0986 1059855 - 1058764 - | GTP-binding protein YchF Hhal_0987 1060509 - 1059925 - | aminoacyl-tRNA hydrolase TERM 448 1060446 - 1060416 - G 95 -17.6 -3.7282 | opp_overlap 1060415 1060412, overlap 1060420 CCAGCTCATCAACAA GCCAGAACCCGGCA TTG TGCCGGGTTCCCGC GTACTTGCTGCCAGG TERM 449 1060442 - 1060420 - G 77 -17.8 -2.67428 | opp_overlap 1060415 1060412, overlap 1060416 CTCATCAACAAGCCA GAACCCGGCA TTG TGCCGGGTTC CCGCGTACTTGCTGC Hhal_0988 1061146 - 1060517 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 Hhal_0989 1062128 - 1061172 - | ribose-phosphate pyrophosphokinase Hhal_0990 1063121 - 1062255 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Hhal_0991 1063725 - 1063114 - | outer membrane lipoprotein LolB Hhal_0992 1065109 - 1063715 - | TPR repeat-containing protein TERM 450 1065082 - 1065065 - G 79 -5.5 -4.67982 | opp_overlap 1065080, overlap 1065066 1065067 CCGCAGGCAACAAAA GGCCG GGGAGCGG CGGCC CCTGGGGAATTTGGT Hhal_0993 1065210 - 1066559 + | shikimate/quinate 5-dehydrogenase TERM 451 1067573 - 1067527 - gT 93 -18.1 -3.18264 | gap 1 GGCCTCACCCAGGAA CACCAGGCCGAAGCCCTCGCCG AGAT CGCCGAGGACTCCGG-CTGATG CGGTAGCCGCGCCGC Hhal_0994 1066480 - 1067571 + | peptide chain release factor 1 TERM 452 1067579 - 1067624 + T 72 -13.3 -3.06815 | gap 2 CCGGCTGATGCGGTA GCCGCG-CCG-CAGCGCGTGG ATCAGG CCACGCGCTGCCGCTCGCGGA TCTCTTCCAGCGACT Hhal_0995 1068033 - 1067599 - | TraR/DksA family transcriptional regulator Hhal_0996 1069221 - 1068145 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 453 1069316 - 1069340 + r 80 -14.9 -3.14344 | opp_overlap 1069308 1069305 1069306 TCAAGGAGCTTTAGA CGGCGTGCCGC ACG GCGGCGCGCCA TTCGTAGCCCGGCTG clpX 1070564 - 1069311 - | ATP-dependent protease ATP-binding subunit Hhal_0998 1070653 - 1070913 + | hypothetical protein Hhal_0999 1070939 - 1071784 + | HemK family modification methylase Hhal_1000 1071781 - 1072524 + | UBA/THIF-type NAD/FAD binding protein Hhal_1001 1073421 - 1072531 - | Hsp33 protein gatB 1074857 - 1073418 - | aspartyl/glutamyl-tRNA amidotransferase subunit B Hhal_1003 1076392 - 1074938 - | glutamyl-tRNA(Gln) amidotransferase, A subunit Hhal_1004 1076696 - 1076409 - | glutamyl-tRNA(Gln) amidotransferase, C subunit Hhal_1005 1076817 - 1077860 + | cell shape determining protein MreB Hhal_1006 1077982 - 1078827 + | rod shape-determining protein MreC Hhal_1007 1078824 - 1079315 + | rod shape-determining protein MreD Hhal_1008 1079349 - 1081271 + | peptidoglycan glycosyltransferase Hhal_1009 1081268 - 1082398 + | rod shape-determining protein RodA Hhal_1010 1082415 - 1083398 + | lytic murein transglycosylase B Hhal_1011 1083395 - 1084453 + | rare lipoprotein A Hhal_1012 1084526 - 1085704 + | Serine-type D-Ala-D-Ala carboxypeptidase Hhal_1013 1085708 - 1086568 + | D-amino-acid transaminase Hhal_1014 1086571 - 1086837 + | hypothetical protein Hhal_1015 1086848 - 1087501 + | lipoate-protein ligase B Hhal_1016 1088552 - 1087533 - | succinylglutamate desuccinylase/aspartoacylase TERM 454 1088232 - 1088176 - G 93 -17.5 -3.53811 | gap 4, opp_overlap 1088224 1088226 TCGATGCTGGCGAAA CAGCCCCGCGAGC-GCACCCGCGCCACCA CCT CGGCGGC-CAGGTGCTGCTC-CGGG-CTG TCGGGGAGACTGGTC Hhal_1017 1090010 - 1088580 - | glutamate--cysteine ligase, GCS2 Hhal_1018 1090711 - 1090025 - | nucleotidyl transferase Hhal_1019 1091738 - 1090713 - | aminoglycoside phosphotransferase Hhal_1020 1091846 - 1094230 + | organic solvent tolerance protein Hhal_1021 1094236 - 1095519 + | PpiC-type peptidyl-prolyl cis-trans isomerase Hhal_1022 1095516 - 1096523 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 455 1096800 - 1096743 - T 70 -14 -2.64099 | gap 2, overlap 1096721 1096742 TGCCCGCACGAGAAG CGCAGGGGACCGCGCCGTAGGCGGGGCG CGCT CGT-CCGCCCCCGGC-CAACCCCCGGCG TCCCCATCCCCGTCG Hhal_1023 1097643 - 1096846 - | dimethyladenosine transferase Hhal_1024 1099037 - 1097640 - | argininosuccinate lyase TERM 456 1099101 - 1099075 - H 75 -3 -4.82901 | gap 2, overlap 1099077 TTTGGTGGACAAAAA CGGGTCGATGGT CGGCC ACC-CCG-CCCG ACGGGGCCGCCGGCG Hhal_1025 1099260 - 1100192 + | porphobilinogen deaminase TERM 457 1100635 - 1100664 + G 75 -6.3 -4.39426 | gap 1, overlap 1100636 1100637 1100639 ACCGTATCTCGCCGA GGCGC-TCCGCGCC CGT GGCGCGGAAGTGGA TTTTCTGGAAGTCTA Hhal_1026 1100189 - 1100983 + | uroporphyrinogen III synthase HEM4 Hhal_1027 1100980 - 1102638 + | protein of unknown function DUF513, hemX TERM 458 1103113 - 1103077 - g 70 -12.1 -3.30441 | GACCACGGCCGAGAA GAGCGGCCCCGACGCCA ACC TGGCGGTGCGGCTGCTC CAGGCGCAGCTGCAG TERM 459 1103972 - 1103940 - g 70 -15.5 -2.82516 | CCGCCGACGAGGACA CCGAGGGTCGGCCCC GCC AGGACTGACCCCCGG CCCTGCAGGCGGACA Hhal_1028 1102640 - 1103965 + | HemY domain-containing protein TERM 460 1104009 - 1104036 + T 100 -25.6 -4.05714 | opp_overlap 1104009, overlap 1104008 CGGGGGATGAGAAAA GGCCCCGGGCCG TTAT CGGCCCGGGGCC TTTCTCGTTGCACCT TERM 461 1104036 - 1104009 - T 100 -25.6 -4.46212 | opp_overlap 1104008 1104009 CGGGGGATGAGAAAA GGCCCCGGGCCG TTAT CGGCCCGGGGCC TTTCTCGTTGCACCT Hhal_1029 1106365 - 1104071 - | malic enzyme Hhal_1030 1107230 - 1106436 - | alpha/beta hydrolase fold Hhal_1031 1112078 - 1107246 - | NAD-glutamate dehydrogenase Hhal_1032 1112639 - 1112175 - | sterol-binding domain-containing protein TERM 462 1112618 - 1112632 + g 70 -3.5 -4.41353 | GCAGCGGCAGGGCCT GATCG AATTG CGGTC TTTTCATCTGTATCA Hhal_1033 1113547 - 1112645 - | peptidase U32 Hhal_1034 1114562 - 1113567 - | peptidase U32 Hhal_1035 1116788 - 1115007 - | dihydrolipoamide dehydrogenase TERM 463 1115269 - 1115243 - G 74 -13 -3.5627 | AGAGGATCTTGGAAA CACCGTCACTGG CAT CCAGCGACAGCG CACGGCCATTGGCCG TERM 464 1115658 - 1115688 + g 75 -9.9 -3.97139 | GTCGCTCTCCGGCGC GTC-CTGACCGTTCA TGG TGA-CGGTCAGCGAC TTCTTGTTGGCCTTG TERM 465 1116813 - 1116835 + r 80 -16.2 -2.90496 | overlap 1116810 CAATCCTTACCGAGA CCGCCGGCGC AGG GCGCCGGCCG TGGTTTGCGCGGGGG Hhal_1036 1118259 - 1116889 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 466 1117912 - 1117955 + g 74 -10.8 -3.72576 | gap 1, overlap 1117913 TTGCGCCGCGGCGGC GGGGGCCG-CGGTCGCTGGCG CGC CGCCATCGGCCGACGGGGCCG TTTCCTCCGCCGGGC aceE 1120937 - 1118262 - | pyruvate dehydrogenase subunit E1 Hhal_1038 1121716 - 1121075 - | hypothetical protein Hhal_1039 1122850 - 1121786 - | fructose-1,6-bisphosphate aldolase TERM 467 1122445 - 1122488 + g 73 -12.2 -3.45023 | opp_overlap 1122420 1122444 CCTCGACGGAGACAC CGCCGGCGTGGGCCATCTCG GCGG CGCGCCGGGTCACGCTGGCG TTGTAGTCGTAGTCG Hhal_1040 1124320 - 1122884 - | pyruvate kinase Hhal_1041 1125537 - 1124353 - | phosphoglycerate kinase Hhal_1042 1127592 - 1125586 - | transketolase Hhal_1043 1130067 - 1127722 - | von Willebrand factor, type A Hhal_1044 1130914 - 1130108 - | CbbQ/NirQ/NorQ C-terminal domain-containing protein TERM 468 1130491 - 1130510 + g 71 -10.6 -3.78934 | GGTGGAAATCGGAGT GGGCGTGC ACCA GCTCGCCC TTCTTCTCCAGCGGC TERM 469 1130958 - 1130977 + r 77 -12.8 -3.36878 | GGATAGTGACCGGGC CGCGCCCC GTGC GGGGTGCG TTGTCCATCCCTCCG TERM 470 1131042 - 1131020 - R 72 -9 -4.16279 | overlap 1131021 1131035 GACACCATGCGAAAA GCGGTGGCTG AAT CAGCCGCCGG TGCCGCCGCCCGCCC TERM 471 1131082 - 1131035 - R 100 -27.1 -2.70932 | gap 2, overlap 1131021 1131020 GCGGTGGCTGAATCA GCCGCCGGTGCCGCCGCCCGCCC CGAG GAGCGGGCGGCGGC-CCGG-GAC CGCGTCACCGCTAGG Hhal_1045 1131452 - 1131093 - | ribulose-bisphosphate carboxylase TERM 472 1131167 - 1131192 + g 70 -12.5 -3.29144 | opp_overlap 1131164 TGTCGTAACCGATCA GGCGCACGTGG TGCT CCGGGTGCGCC TTATGGCACGCCTCG rbcL 1132893 - 1131472 - | ribulose bisophosphate carboxylase Hhal_1047 1133092 - 1134048 + | LysR family transcriptional regulator TERM 473 1134090 - 1134121 + F 77 -15.8 -2.52464 | overlap 1134090 CCTTAGTTCCCCACG GGGCGCCCCGGC CTTAGGTT GCCGTGGCGCCC TGGGTTCAAGCCGGG Hhal_1048 1134147 - 1134827 + | ribulose-phosphate 3-epimerase Hhal_1049 1134875 - 1135762 + | phosphoribulokinase TERM 474 1135830 - 1135788 - T 100 -27.2 -2.61274 | opp_overlap 1135794, overlap 1135794 CCCACCTCAATGAAG CAAAAAGAGGGGGGTGCCAC CGC GTGGCACCCCCCTCTTTACG TACGCCTGACCCGCT TERM 475 1135824 - 1135794 - T 100 -27 -4.93547 | opp_overlap 1135794, overlap 1135788 TCAATGAAGCAAAAA GAGGGGGGTGCCAC CGC GTGGCACCCCCCTC TTTACGTACGCCTGA TERM 476 1135794 - 1135824 + T 100 -27 -3.65351 | opp_overlap 1135788 1135794 TCAATGAAGCAAAAA GAGGGGGGTGCCAC CGC GTGGCACCCCCCTC TTTACGTACGCCTGA Hhal_1050 1136109 - 1135864 - | hypothetical protein Hhal_1051 1136276 - 1137325 + | delta-aminolevulinic acid dehydratase TERM 477 1137833 - 1137819 - g 78 -6.4 -4.56775 | overlap 1137820 AGCCTGCTGGAAAAA CTCGAC GAC GTCGAA GCAGAGACCGATCGC Hhal_1052 1137330 - 1138004 + | hypothetical protein Hhal_1053 1138008 - 1139258 + | phosphate transporter Hhal_1054 1139274 - 1140086 + | shikimate 5-dehydrogenase Hhal_1055 1140546 - 1140112 - | dehydratase gltB 1140807 - 1145267 + | glutamate synthase subunit alpha TERM 478 1146473 - 1146424 - g 72 -14.1 -3.13403 | gap 1, overlap 1146422 TGCCCCGGACGAACA CGGGCGACGCCGC-CCGGAGCCGG TGC CCGGCTCCGAAGAGGTGCTGCCGG CCGATAGCCTGATCA gltD 1145309 - 1146718 + | glutamate synthase subunit beta Hhal_1058 1146729 - 1147823 + | uroporphyrinogen decarboxylase TERM 479 1147836 - 1147888 + GT 81 -15.7 -3.03443 | gap 3, opp_overlap 1147836 TAGGCGGCGGAGACA GC-GCACCCTCTCGGCG-GGCGTCAT TCCG GTG-CGCTTCGCCGAGAGGGGGCGGC TCTATCTGCTCCTGC Hhal_1059 1147792 - 1148262 + | NUDIX hydrolase Hhal_1060 1149176 - 1148271 - | hypothetical protein TERM 480 1148597 - 1148628 + g 70 -12.2 -3.25823 | gap 1, opp_overlap 1148602, overlap 1148600 CGCACACGGCGGCCA CCACACCGCCGGTGG CCA CCACCGGCAG-GCGG TTGATCTCCGGCCGG TERM 481 1148624 - 1148602 - G 78 -17 -2.78463 | opp_overlap 1148600 1148597 ACGGCGGCCACCACA CCGCCGGTGG CCA CCACCGGCAG GCGGTTGATCTCCGG TERM 482 1149238 - 1149269 + r 71 -10.7 -3.6682 | overlap 1149239 GCCGGAAGGCCGGCA ACGCCGGCGAGGG TAACGC CTCCCGCCGGCGG TTTCAGTAGGTCGCG TERM 483 1149239 - 1149268 + r 73 -14.2 -2.79878 | overlap 1149238 CCGGAAGGCCGGCAA CGCCGGCGAGGG TAACGC CTCCCGCCGGCG GTTTCAGTAGGTCGC Hhal_1061 1151347 - 1149272 - | TonB-dependent receptor, plug Hhal_1062 1151481 - 1152863 + | hypothetical protein Hhal_1063 1152860 - 1156357 + | hypothetical protein Hhal_1064 1156411 - 1156602 + | hypothetical protein Hhal_1065 1157260 - 1156613 - | NAD-dependent epimerase/dehydratase Hhal_1066 1158955 - 1157294 - | hypothetical protein Hhal_1067 1160445 - 1159009 - | GntR family transcriptional regulator TERM 484 1159251 - 1159241 - G 70 -8.2 -3.82218 | overlap 1159242 ACCCACACCACGAAA CCGC CCC GCGG CCGCGTCACCCGGGT TERM 485 1159568 - 1159521 - G 74 -16.2 -2.81173 | opp_overlap 1159534 AGGAACTGCAGTAGA GCACCTCGCCGTGGGCGTCGAA GGCC TTCGCTGCCCACGGCCGGGTAC CGTCGAAGGCCAGCT Hhal_1068 1160564 - 1161340 + | methyltransferase type 11 TERM 486 1161376 - 1161400 + F 100 -18.6 -5.75342 | GCACGGGCAGGACGA CGCGGCCCCT CGACC AGGGGCCGCG TTTTTTTTGCCCACC Hhal_1069 1161525 - 1161881 + | hypothetical protein prpD 1163385 - 1161940 - | 2-methylcitrate dehydratase TERM 487 1162943 - 1163000 + g 70 -15.4 -2.82516 | TGGGCCTTGATGGCC GCAGTCAGCACCTCGCGCATGGTCAG CGGTGT CTGACCCAGCGCCAGGCGCCGACGGC TCTCGTAATCGGCCG Hhal_1071 1164608 - 1163487 - | 2-methylcitrate synthase/citrate synthase II prpB 1165510 - 1164605 - | 2-methylisocitrate lyase Hhal_1073 1166576 - 1165572 - | alcohol dehydrogenase TERM 488 1166414 - 1166439 + g 78 -14 -3.62572 | overlap 1166412 1166415 AACGACGCAGGATCT TGCCCTGGCC CGTAAC GGCCAGGGCG TCTTTGTAGTTCAGT TERM 489 1166415 - 1166438 + g 70 -15.3 -2.7682 | overlap 1166414 1166412 ACGACGCAGGATCTT GCCCTGGCC CGTAAC GGCCAGGGC GTCTTTGTAGTTCAG TERM 490 1167467 - 1167444 - g 80 -16 -3.14468 | gap 1 GCCGAGGAGATGGAA GCCCTCGGCGC CGA GCGCCG-GGGC GGCCGCTGGTACTAC Hhal_1074 1166856 - 1169387 + | solute binding protein-like protein Hhal_1075 1169390 - 1170502 + | binding-protein-dependent transport systems inner membrane component Hhal_1076 1170499 - 1171833 + | binding-protein-dependent transport systems inner membrane component Hhal_1077 1171833 - 1172810 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Hhal_1078 1172807 - 1173826 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Hhal_1079 1173833 - 1174414 + | methyltransferase type 11 Hhal_1080 1174687 - 1174418 - | hypothetical protein Hhal_1081 1175665 - 1174697 - | patatin TERM 491 1174832 - 1174846 + g 70 -12.8 -3.27382 | opp_overlap 1174831 1174830 1174828, overlap 1174830 1174828 GCTGATGAGAATATC CGGCGC CTC GCGCCG TCTCTTCTCTTGCAG Hhal_1082 1176404 - 1175757 - | methyltransferase type 12 TERM 492 1176031 - 1175973 - G 72 -14.5 -2.87132 | gap 2 CCCGGGGCGCAGACA CCCCCAGAGGCCGTCGAGCTCGGCGGCCG GCT CGGCCAG-GTGCTCGACCACCTC-GGTGG CGGTGACCAGCTCAT Hhal_1083 1177246 - 1176407 - | protein of unknown function DUF306, Meta and HslJ TERM 493 1177324 - 1177267 - R 77 -8.9 -4.20712 | gap 2, opp_overlap 1177291 CAGAATACCCCAAAA CTGTCGCCCAGCGG-GGCCGCTGG-CG CTGACC CGACCGGCGGCCGCCCCCGGGCGGGGG CGGCGCGGGGGCCTG Hhal_1084 1178768 - 1177347 - | dihydrolipoamide dehydrogenase Hhal_1085 1180124 - 1178835 - | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase kgd 1183013 - 1180176 - | alpha-ketoglutarate decarboxylase Hhal_1087 1183894 - 1183100 - | Sec-independent protein translocase, TatC subunit TERM 494 1183535 - 1183511 - G 77 -11.4 -3.82378 | overlap 1183528 ACCGAGGTAGAACAA GCCGGTGCTG GAGAT CAGCAGCGGC CAGATCATCCGCCGC TERM 495 1183831 - 1183850 + g 71 -2.7 -4.63218 | CCTTCAGGTGGCTAA GCAGCGG CGCCTC CTGCAGC TTTTCTTCACCACCC Hhal_1088 1184244 - 1183891 - | twin-arginine translocation protein, TatB subunit Hhal_1089 1184582 - 1184289 - | twin arginine-targeting protein translocase Hhal_1090 1184971 - 1184627 - | phosphoribosyl-ATP pyrophosphatase TERM 496 1184861 - 1184903 + g 77 -14.6 -3.11768 | CAGCCCCTTGTCATG GAGCCGCGCCACGTAGGAGG TAT CCGCCGACGCGCCGCGGCGC TGTTCGATGGTCTCG Hhal_1091 1185732 - 1184968 - | imidazoleglycerol phosphate synthase, cyclase subunit Hhal_1092 1186462 - 1185722 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Hhal_1093 1187109 - 1186459 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Hhal_1094 1187705 - 1187112 - | imidazoleglycerol-phosphate dehydratase Hhal_1095 1188234 - 1187770 - | D-tyrosyl-tRNA deacylase TERM 497 1188468 - 1188488 + r 100 -14 -6.34424 | opp_overlap 1188468 GGGAAGCGGGTTAAA GCCGACGC AGGAC GCGTCGGC TTTTTTTTTTGCCGG TERM 498 1188488 - 1188468 - R 86 -14.7 -3.55622 | opp_overlap 1188468 GGGAAGCGGGTTAAA GCCGACGCA GGA CGCGTCGGC TTTTTTTTTTGCCGG Hhal_1096 1189053 - 1188508 - | hypothetical protein Hhal_1097 1189218 - 1190129 + | lipid A biosynthesis acyltransferase TERM 499 1190122 - 1190112 - f 79 -2.4 -5.0538 | overlap 1190113 CCCTACCCGAAAAAA CGGC GCC GTCG AGCTTGAAAGCACCC Hhal_1098 1190229 - 1190444 + | ribosomal protein S21 TERM 500 1190689 - 1190653 - g 78 -14.3 -3.55622 | GCCAAGGCGGTCAAA CAGCGTCGCGAATCCGC CGA GCAGTACCGCGACGCCG GCGAGACCGCCCGAG Hhal_1099 1190464 - 1190925 + | GatB/Yqey domain-containing protein Hhal_1100 1190980 - 1192824 + | DNA primase Hhal_1101 1192926 - 1194734 + | RpoD family RNA polymerase sigma factor TERM 501 1194746 - 1194775 + T 100 -22.2 -3.84185 | opp_overlap 1194735 GTAACCTTCCCGACC CACCGGGGCGCC ATTGCC GGCGCCCCGGTG TTGTGTTTGGATCCC Hhal_1102 1195404 - 1194985 - | hypothetical protein TERM 502 1197536 - 1197486 - g 91 -15.3 -3.87815 | gap 2, overlap 1197487 CGCCAGGGGCAGAAA CCCCCGACGGCCGACAACCGGCCCC GGC GCGGCCCG-CGCCGGCCG-CGGGGC AAGGCCCGGCGCTGA TERM 503 1197535 - 1197487 - g 82 -18.8 -2.92475 | gap 2, overlap 1197486 GCCAGGGGCAGAAAC CCCCGACGGCCGACAACCGGCCCC GGC GCGGCCCG-CGCCGGCCG-CGGGG CAAGGCCCGGCGCTG Hhal_1103 1195530 - 1197551 + | radical SAM domain-containing protein Hhal_1104 1199013 - 1197580 - | glycogen/starch synthases, ADP-glucose type Hhal_1105 1201256 - 1199010 - | glycogen branching enzyme TERM 504 1201920 - 1201883 - g 82 -6.2 -4.72497 | gap 1, overlap 1201885 1201907 CATCGACGAAGAAAA CCGGGTGGTCC-GCTTC GACGA GAAGCCGGCCCAGCCTG CACCAATCCCCGGCC Hhal_1106 1201335 - 1202600 + | glucose-1-phosphate adenylyltransferase TERM 505 1202980 - 1202964 - g 72 -13.7 -3.16564 | GTGTCAGCGCATCAA CCGCCAG CGG CTGGCGG ACCCGTTCCCCGCCT Hhal_1107 1202590 - 1204332 + | glycoside hydrolase family protein Hhal_1108 1204329 - 1205822 + | 4-alpha-glucanotransferase Hhal_1109 1208392 - 1205837 - | alpha-glucan phosphorylases TERM 506 1206025 - 1205999 - G 72 -13.6 -3.24747 | GGCCGAGAGGACGAA CCGCTGGGTCCG GGC CGGATCCCGCGG GTGGGGCACCGGGCT TERM 507 1208474 - 1208504 + r 100 -25.6 -2.53911 | opp_overlap 1208461 1208476 1208480, overlap 1208480 CACCACCCCCGCAAC GAGAAAGGCCCGCC GGG GGCGGGCCTTTCTC TCACTTGCAGCTTAC TERM 508 1208502 - 1208476 - R 100 -22.4 -2.71364 | opp_overlap 1208474 1208480, overlap 1208461 1208480 CCACCCCCGCAACGA GAAAGGCCCGCC GGG GGCGGGCCTTTC TCTCACTTGCAGCTT TERM 509 1208498 - 1208480 - R 100 -17.4 -4.05446 | opp_overlap 1208474 1208480, overlap 1208461 1208476 CCCCGCAACGAGAAA GGCCCGCC GGG GGCGGGCC TTTCTCTCACTTGCA TERM 510 1208480 - 1208498 + r 100 -17.4 -4.09108 | opp_overlap 1208461 1208480 1208476, overlap 1208474 CCCCGCAACGAGAAA GGCCCGCC GGG GGCGGGCC TTTCTCTCACTTGCA Hhal_1110 1208747 - 1208538 - | cold-shock DNA-binding domain-containing protein Hhal_1111 1208972 - 1209340 + | hypothetical protein Hhal_1112 1209387 - 1209791 + | regulatory protein, ArsR TERM 511 1210248 - 1210274 + G 100 -13.6 -4.82901 | CCAGCGGCGCGGAGA CCGGCGGCAGAG GGC CTCGCCCGCCGG TTTTTATGGCCCACG Hhal_1113 1209788 - 1210462 + | phospholipase/carboxylesterase Hhal_1114 1210864 - 1210478 - | hypothetical protein Hhal_1115 1211575 - 1210946 - | radical SAM domain-containing protein Hhal_1116 1212355 - 1211579 - | putative 6-pyruvoyl tetrahydropterin synthase Hhal_1117 1213748 - 1212585 - | type I phosphodiesterase/nucleotide pyrophosphatase Hhal_1118 1215054 - 1213741 - | GAF sensor signal transduction histidine kinase Hhal_1119 1216044 - 1215103 - | glucokinase TERM 512 1215541 - 1215498 - G 71 -11.6 -3.61178 | gap 1, opp_overlap 1215461 1215497, overlap 1215532 CCGACTCAGCGGAAA CGTGGCCGAGTTCCTCG-CGC AGA GCGGCGAGCAACGCCGCCTCG GTCTCATCGGCGGCG Hhal_1120 1217411 - 1216041 - | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) Hhal_1121 1219195 - 1217408 - | glycoside hydrolase 15-related Hhal_1122 1219835 - 1219239 - | carboxymuconolactone decarboxylase Hhal_1123 1220266 - 1219826 - | hypothetical protein TERM 513 1220003 - 1219989 - G 70 -12.8 -3.29273 | overlap 1219987 GGCACCACTACAACA CCGCCG TTG CGGCGG TTGCGCTGACACTCC Hhal_1124 1221788 - 1220280 - | PAS/PAC sensor hybrid histidine kinase Hhal_1125 1222069 - 1223667 + | methyl-accepting chemotaxis sensory transducer TERM 514 1223696 - 1223745 + F 100 -27.3 -2.69977 | gap 1, overlap 1223705 CCTGACGGGGCGATG CCTCGTGCACGCACTCGCGCGCGC CCC GTGCGCGCGAGTGCGTGTTC-AGG TAGTGTATAAGCTCT TERM 515 1223705 - 1223737 + F 100 -27.1 -3.0752 | overlap 1223696 GCGATGCCTCGTGCA CGCACTCGCGCGCGC CCC GTGCGCGCGAGTGCG TGTTCAGGTAGTGTA Hhal_1126 1223812 - 1225227 + | isochorismate synthases Hhal_1127 1225240 - 1226913 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase Hhal_1128 1226917 - 1227687 + | alpha/beta hydrolase fold Hhal_1129 1227689 - 1228540 + | naphthoate synthase Hhal_1130 1228543 - 1229544 + | O-succinylbenzoate-CoA synthase Hhal_1131 1229541 - 1230920 + | O-succinylbenzoate-CoA ligase Hhal_1132 1231036 - 1231416 + | hypothetical protein Hhal_1133 1231508 - 1232068 + | hypothetical protein Hhal_1134 1233221 - 1232136 - | hypothetical protein TERM 516 1232783 - 1232742 - G 82 -14.5 -3.53012 | gap 1 GGTGGCCGCCGTAAA CTGACCGATACCGCTGGCGA CCG TCGCC-GCCGCATCGGTAAG CGTCCCCACCGCCGG TERM 517 1233264 - 1233223 - R 100 -22.3 -2.89564 | gap 1 GTGCGACTCCACACA CGGATACGCCCCGGCGCGGC CAA GCCGCGCCGGGCCA-ACCCG GATCAGGGTAACAGG Hhal_1135 1235328 - 1233295 - | lytic transglycosylase, catalytic Hhal_1136 1235586 - 1236512 + | alpha/beta hydrolase fold Hhal_1137 1236536 - 1237846 + | amine oxidase Hhal_1138 1238508 - 1237969 - | molybdenum cofactor biosynthesis protein B Hhal_1139 1238654 - 1238514 - | hypothetical protein TERM 518 1239999 - 1239969 - g 72 -13.3 -3.14132 | gap 1 CTGCCCGCCGAGGAA CGGCGCGCCGTCGA CGAG CCGACGGCAC-CCG ACGCGGGGCTGCCGG Hhal_1140 1238775 - 1240973 + | AsmA family protein Hhal_1141 1240978 - 1242054 + | A/G-specific adenine glycosylase Hhal_1142 1242136 - 1242408 + | hypothetical protein Hhal_1143 1242815 - 1244053 + | phage integrase family protein Hhal_1144 1244597 - 1244893 + | transposase IS3/IS911 family protein Hhal_1145 1244871 - 1245713 + | integrase catalytic subunit Hhal_1146 1245700 - 1246470 + | hypothetical protein Hhal_1147 1249148 - 1246569 - | DEAD-like helicases-like Hhal_1148 1249301 - 1249816 + | hypothetical protein Hhal_1149 1250713 - 1249928 - | hypothetical protein TERM 519 1250840 - 1250869 + r 70 -14.3 -2.65223 | overlap 1250839 AAGACCTTTCGATGC GCGTTATGCGGCG GTTC CGCGGCGTAACGC ATTATCCTGCGCTTC Hhal_1150 1252103 - 1250925 - | hypothetical protein Hhal_1151 1255313 - 1252134 - | hypothetical protein Hhal_1152 1256437 - 1255433 - | hypothetical protein TERM 520 1255991 - 1256009 + g 76 -8 -4.32436 | ATAGGCCATGTCCGC CCGGTCGG ATT CCGGCAGG TTTTCGTAGTCGTGT Hhal_1153 1257723 - 1256434 - | restriction modification system DNA specificity subunit Hhal_1154 1258676 - 1257720 - | Abi family protein Hhal_1155 1260816 - 1258837 - | N-6 DNA methylase TERM 521 1261818 - 1261836 + H 72 -11.7 -3.48276 | opp_overlap 1261818 1261806 1261804, overlap 1261822 ACACGCTGCGAACCA GGGGGGT TCGAT ACCCCCC TTGTATGAGCCGGGA TERM 522 1262226 - 1262243 + H 82 -6.2 -4.82855 | opp_overlap 1262210, overlap 1262229 CCCAGCTGTGCAACG CTGGGG GCATCA CCCCGG TTTTTCCCTTTCGTA TERM 523 1262349 - 1262365 + H 71 -10.1 -3.68619 | CCCATTGGCGCACCG CCCCCTG TAC TAGGGGG TTTGCGTACCTTAAG TERM 524 1262445 - 1262474 + H 71 -7.7 -4.13014 | opp_overlap 1262438 1262437 GCACGAAGCGACCAC CCGCGCGGTGAGC CGGC GTGTACCGCCCGG TTTTCCCCGTGTACC TERM 525 1263475 - 1263462 - g 75 -6.7 -4.47686 | TTACAAAAAAGTAAA GGAAG GTGG CTTCC CAAAACCTATAAAAC Hhal_1156 1263352 - 1263567 + | phage transcriptional regulator, AlpA TERM 526 1264274 - 1264255 - g 86 -4.2 -5.21709 | gap 1, overlap 1264256 1264257 CTTTAGACGAAAAAA GCGCCGTCG ATC CGACGGT-C TGGCGGCCTGAGTAC Hhal_1157 1263624 - 1266305 + | hypothetical protein Hhal_1158 1267336 - 1267025 - | hypothetical protein TERM 527 1267390 - 1267361 - R 72 -11.4 -3.48276 | opp_overlap 1267365 CTCTTCGCCAGAGAA GCCACCCCGG GCCGTGGTTG CCGGGGCGGC ACGTGGTTTTACGAG TERM 528 1268054 - 1268093 + r 74 -13.4 -3.23216 | GGCCTGGTCGGCCCC TGGGGCGCCGCCTGCCCC GAAC GGGGCGCGTGCCGGCCCA TTCCTCCTCATCAAG Hhal_1160 1268446 - 1268153 - | aldo/keto reductase TERM 529 1268789 - 1268812 + G 72 -9.4 -3.96624 | opp_overlap 1268757 ACCGAGGCGGCGGCG GCCGCGACCC GCGA GGCCCGCGGC TTTGTGCTCCGGCTC Hhal_1161 1268609 - 1269133 + | 2'-5' RNA ligase Hhal_1162 1269368 - 1269691 + | cytochrome c, class I Hhal_1163 1269700 - 1271004 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Hhal_1164 1271851 - 1271066 - | formate dehydrogenase gamma subunit TERM 530 1271570 - 1271541 - G 74 -10.7 -3.72695 | gap 1 ACCTCGTGCAGGAAA GGCACCACG-TGGC TGC GCCAGCGCAGCGCC AGGTAAGTGAGGACA Hhal_1165 1272623 - 1271844 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Hhal_1166 1274872 - 1272620 - | formate dehydrogenase TERM 531 1273652 - 1273616 - G 100 -18 -4.2558 | CAGCGCCGACCAAAA CGTGCTCGCCAACCCG AATTG CGGGTTGGCGAGCGGG TAGCGATCGGGGACA TERM 532 1274504 - 1274543 + g 93 -21.4 -3.17212 | GCTCACCGGCCGCCA GCGGTCGCTGCCGCGCGG CCCG TCGCGCAGCAGCGGCTGC TTGATCCGATCCTGG Hhal_1167 1275642 - 1275094 - | hypothetical protein Hhal_1168 1276292 - 1275645 - | hypothetical protein Hhal_1169 1276460 - 1276984 + | putative cytochrome c Hhal_1170 1276981 - 1278354 + | hypothetical protein Hhal_1171 1279237 - 1278368 - | membrane-flanked domain-containing protein Hhal_1172 1279715 - 1279248 - | DoxX family protein TERM 533 1279654 - 1279624 - G 74 -11.9 -3.78953 | gap 2 ACGGCCATCATCAAA CCGGCGCCGATCCGC AGC GCGG-TCAGC-CCGG CATCGGCCACCAGCG TERM 534 1279771 - 1279748 - R 74 -10.9 -3.60098 | ACTGTCGATGTGAAA CCGGCGCGG GCACCG CCGCGCAGG CAATCAGCCGGACCA Hhal_1173 1280780 - 1279842 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 535 1280334 - 1280313 - G 73 -7.9 -4.14977 | overlap 1280314 GAAGATGACAAACAA CTCCCCCAG CGGA CCGCGGGAG ATCGGGAACGGGCCG Hhal_1174 1280892 - 1281131 + | thiamineS protein Hhal_1175 1281331 - 1281140 - | hypothetical protein Hhal_1176 1282032 - 1281373 - | ribose-5-phosphate isomerase A Hhal_1177 1282104 - 1283675 + | threonine dehydratase TERM 536 1284755 - 1284776 + G 72 -5.1 -4.3953 | gap 1, overlap 1284753 1284752 ATAACTGCACAGCCC CGCACCGC GACGGCA GCGG-GCG TTTCTTCTGGTTCAG Hhal_1178 1283701 - 1284813 + | polysaccharide deacetylase Hhal_1179 1285825 - 1284833 - | hypothetical protein TERM 537 1285973 - 1285933 - R 71 -7.3 -4.13945 | overlap 1285934 1285936 ACGGCCAGCGGAAAA TGAGCCCGGCTACTGCGGG CGC CCCGGGGCAGGCGGCCTCG CTCAGCCCTCAGCGA Hhal_1180 1286439 - 1285975 - | hypothetical protein Hhal_1181 1287047 - 1286436 - | 5-formyltetrahydrofolate cyclo-ligase Hhal_1182 1287635 - 1287345 - | hypothetical protein Hhal_1183 1287851 - 1287639 - | hypothetical protein TERM 538 1287716 - 1287762 + g 76 -7.6 -4.25104 | overlap 1287744 TCTTTTCCTGAAGCG CCGCCCGATCCGCCTGGAGCTG CTC CTGCGCCTCGCGAAGCAGGCGG TTTTCCTCGCGCAGG TERM 539 1288151 - 1288131 - g 72 -13.9 -3.12351 | opp_overlap 1288150 CTGGCCGATACCGAA CCGCGCGGC GAG GCGGCGCGG GCCTGCCTGGAGACG Hhal_1184 1287969 - 1288523 + | yecA family protein TERM 540 1288718 - 1288744 + G 74 -15.1 -3.01637 | opp_overlap 1288668, overlap 1288712 1288710 GACGCGGTGGCGGTG CTCGCCCCCGG CCGGC CCGAGGGCGAG TATGTGCTGTTCGTC Hhal_1185 1288520 - 1289878 + | peptidase M24 Hhal_1186 1289881 - 1291122 + | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Hhal_1187 1291119 - 1292330 + | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Hhal_1188 1292422 - 1293429 + | extracellular solute-binding protein Hhal_1189 1293435 - 1295084 + | binding-protein-dependent transport systems inner membrane component TERM 541 1295085 - 1295101 + F 80 -15.1 -3.06302 | overlap 1295071 1295066 ATCCGTGGTCGCTAA GCCCCGG CCC CCGGGGC TTGCGTGCCCGTCAT TERM 542 1295229 - 1295206 - g 72 -13.8 -3.21099 | CCGCTCTACGATCAA CACGTGGGCG CCGG CGCCCGCGTG GTCGACTTCGCCGGC TERM 543 1296010 - 1295992 - g 72 -13.8 -3.14564 | opp_overlap 1295992 GCAGCCCTTGAGGAA CAGCGCCG CCA CGGCGCCG CCTGGCGCCTGATCG Hhal_1190 1295176 - 1296258 + | glycine cleavage system aminomethyltransferase T Hhal_1191 1296313 - 1296705 + | glycine cleavage system H protein TERM 544 1296764 - 1296810 + G 85 -19.4 -3.02144 | GCATACCGAGCAGGA GGTCCGCGAGATGCTCGACGCT ATC GGCGTCGAGCGGATCGAGGACC TCTTCGACGAAATCC Hhal_1192 1296735 - 1298117 + | glycine dehydrogenase subunit 1 Hhal_1193 1298158 - 1298655 + | redoxin domain-containing protein Hhal_1194 1298658 - 1300124 + | glycine dehydrogenase subunit 2 Hhal_1195 1300152 - 1301102 + | ribokinase-like domain-containing protein TERM 545 1301128 - 1301153 + F 100 -18.3 -3.96618 | overlap 1301131 TAGCGATGGTATCCT GGAGCCCCCGC CCCG GCGGGGGCTTC TTATTTGCGGTTCCG TERM 546 1301131 - 1301150 + F 95 -16.4 -4.1023 | overlap 1301128 CGATGGTATCCTGGA GCCCCCGC CCCG GCGGGGGC TTCTTATTTGCGGTT Hhal_1196 1301180 - 1301740 + | N-acetyl-anhydromuranmyl-L-alanine amidase apaH 1302585 - 1301749 - | diadenosine tetraphosphatase TERM 547 1302647 - 1302664 + r 80 -4.7 -4.82901 | overlap 1302639 TCAGGGTCTCACGTC GCGGCGG CGGC CTGCAGC TTTTTCTCGAGCACA Hhal_1198 1303746 - 1302640 - | transaldolase TERM 548 1305080 - 1305101 + G 77 -15.1 -3.15663 | CGCCCGCGACTGCAC GCTGCCGGC AGCC GCCGGCGGC TTGCTGGCCATCCGT Hhal_1199 1304016 - 1305272 + | diaminopimelate decarboxylase Hhal_1200 1305277 - 1306140 + | diaminopimelate epimerase Hhal_1201 1306159 - 1306869 + | hypothetical protein TERM 549 1307052 - 1307110 + G 73 -16.8 -2.59921 | overlap 1307054 GCTTGGGTGGCCCAC CAGCG--GCGCCGCGGCCTGGCCGGCCGCA CCC TG-GGCCG-CCAGCTCGCGGCGCTGCGCAG CTTCTACCGCTTCCT Hhal_1202 1306872 - 1307786 + | tyrosine recombinase XerC Hhal_1203 1307873 - 1308427 + | ATP-dependent protease peptidase subunit hslU 1308432 - 1309760 + | ATP-dependent protease ATP-binding subunit Hhal_1205 1309807 - 1310556 + | ubiquinone/menaquinone biosynthesis methyltransferases Hhal_1206 1310570 - 1311148 + | hypothetical protein Hhal_1207 1311145 - 1312806 + | 2-polyprenylphenol 6-hydroxylase Hhal_1208 1313392 - 1312826 - | DJ-1 family protein Hhal_1209 1314207 - 1313389 - | protein of unknown function DUF610, YibQ TERM 550 1313655 - 1313617 - G 80 -15.9 -3.19463 | opp_overlap 1313616 1313615 1313613, overlap 1313619 CCGAGGATCGAGGAA GACGTGGCGCACGGCGT TGTCC ACGCCGTGCTCCTCGGC CATCTGCTGTGCCAC TERM 551 1313653 - 1313619 - G 85 -17.1 -3.15996 | opp_overlap 1313616 1313615 1313613, overlap 1313617 GAGGATCGAGGAAGA CGTGGCGCACGGCGT TGTCC ACGCCGTGCTCCTCG GCCATCTGCTGTGCC TERM 552 1313798 - 1313810 + g 72 -9.1 -4.07568 | TTGTTGACGCCGGCG GCGTG GGG CACGC TTTTCAGCGCGCGAG Hhal_1210 1315456 - 1314209 - | carboxyl-terminal protease Hhal_1211 1316632 - 1315484 - | Fis family transcriptional regulator TERM 553 1316010 - 1316036 + g 82 -17.2 -3.01791 | CGCGCCTCCAGCTCC TCGCGCCGGGCG TCA CGCTCGGCGCGC TGTTCGGCCAAGGAT TERM 554 1316218 - 1316206 - G 72 -6.9 -4.34402 | overlap 1316209 CGTGGTAGACCAAAA GACGC TGG GCGCC GGCCGGATCCTGTTG TERM 555 1316290 - 1316252 - G 90 -19.7 -3.14944 | gap 1, opp_overlap 1316256 GAGCAGCAGACGCAA CGGATCGTCGCCGCC-AC TGAC GTAGGCGGCGACGATCTG CTCGGCCAGGGTCTC TERM 556 1316256 - 1316286 + g 78 -17.7 -2.78384 | gap 1, opp_overlap 1316252 AGCAGACGCAACGGA TCGTCGCCGCC-AC TGAC GTAGGCGGCGACGA TCTGCTCGGCCAGGG Hhal_1212 1316760 - 1317200 + | rhodanese domain-containing protein TERM 557 1317243 - 1317221 - g 70 -9 -3.88946 | opp_overlap 1317235 CATGGCAGAGAACAA CGGCAACGGC AGC ACCGGCGCCG CCGACACGGGCCAGC Hhal_1213 1317207 - 1317728 + | preprotein translocase subunit SecB Hhal_1214 1317733 - 1318731 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Hhal_1215 1320173 - 1318758 - | nitrogen metabolism transcriptional regulator, NtrC, Fis family Hhal_1216 1321239 - 1320166 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 558 1321374 - 1321348 - R 100 -13.7 -5.13741 | gap 1 GCAATGCAATAAAAA GGGGCGGCAGCC AGCC GGCC-CCGCCCC CTGTACACAGCATCC Hhal_1217 1322817 - 1321402 - | glutamine synthetase, type I Hhal_1218 1323187 - 1322954 - | SirA family protein Hhal_1219 1324238 - 1323174 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase glyQ 1324370 - 1325284 + | glycyl-tRNA synthetase subunit alpha Hhal_1221 1325277 - 1327367 + | glycine--tRNA ligase Hhal_1222 1327376 - 1327924 + | histidinol-phosphate phosphatase family protein Hhal_1223 1327921 - 1328667 + | phospholipid/glycerol acyltransferase Hhal_1224 1331140 - 1328717 - | DNA gyrase, B subunit Hhal_1225 1332248 - 1331199 - | DNA replication and repair protein RecF Hhal_1226 1333354 - 1332254 - | DNA polymerase III, beta subunit Hhal_1227 1334924 - 1333575 - | chromosomal replication initiator protein DnaA Hhal_1228 1335154 - 1335294 + | ribosomal protein L34 TERM 559 1335537 - 1335570 + G 100 -16.7 -4.4648 | overlap 1335539 TCATCCGCGAGAGTT TCCGGGTCCGGCAGG GCGG CCTGCCGGACCACGA TTTTGTCGTCGGGGT TERM 560 1335539 - 1335569 + G 89 -19.1 -3.27406 | gap 1, overlap 1335537 ATCCGCGAGAGTTTC CG-GGTCCGGCAGG GCGG CCTGCCGGACCACG ATTTTGTCGTCGGGG Hhal_1229 1335314 - 1335682 + | ribonuclease P protein component TERM 561 1337004 - 1337040 + GF 73 -12.3 -3.30771 | opp_overlap 1337034 GAAGAACTGGGGCGT GGCGATCCTGATCCTCA CGC TGCTGATCAAGATCGCC TTCTACAAGCTGTCG Hhal_1230 1335907 - 1337559 + | 60 kDa inner membrane insertion protein TERM 562 1337592 - 1337620 + GT 93 -19.6 -2.9175 | opp_overlap 1337581 ACGATCTGCGCGATG GCGACCCCGTCC GGTCA GGGCGGGGTCGC TGTCGTTCGGGTATC Hhal_1231 1337517 - 1338926 + | tRNA modification GTPase TrmE TERM 563 1339119 - 1339091 - T 91 -20.3 -2.52795 | AAGGCGCGGAATGTA TCGGGGCCGATCC ACC GGATCGGCCCCGC TGCGCCTTCAGACTG acpP 1339388 - 1339149 - | acyl carrier protein Hhal_1233 1340278 - 1339523 - | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 564 1339984 - 1340000 + g 71 -11.5 -3.61715 | GCATGAGCAGATTGT CGCGGGT GAT GCCCGCG TTATTCACCAGGATC Hhal_1234 1341261 - 1340308 - | malonyl CoA-acyl carrier protein transacylase Hhal_1235 1342272 - 1341301 - | 3-oxoacyl-(acyl carrier protein) synthase III Hhal_1236 1343300 - 1342269 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 565 1343265 - 1343227 - G 71 -11.1 -3.53811 | gap 2, overlap 1343230 TCCAGGGCCTGCAAA GCAGCGGGGACCACGACAC TTG GT-CCGTGATCCCCGCC-C ATGGCGTCCAGCGAC TERM 566 1343263 - 1343230 - G 75 -16.1 -2.90615 | gap 1, overlap 1343227 AGGGCCTGCAAAGCA GCGGGGACCACGACAC TTG GT-CCGTGATCCCCGC CCATGGCGTCCAGCG Hhal_1237 1343538 - 1343359 - | ribosomal protein L32 Hhal_1238 1344101 - 1343589 - | hypothetical protein Hhal_1239 1344193 - 1344774 + | maf protein Hhal_1240 1345786 - 1344836 - | peptidase S49 TERM 567 1344981 - 1344927 - G 70 -3.5 -4.52857 | overlap 1344930 AGCTGCGAGAGAAAA TCACGCCGCGCCGT-ATAGTCGACCAG CTC CTCCTCGCCGATCACGTCGCGG-GCGA CGCTGCGCACGCTGC Hhal_1241 1346760 - 1345783 - | RluA family pseudouridine synthase Hhal_1242 1347159 - 1349945 + | ribonuclease TERM 568 1349999 - 1349966 - T 100 -22.5 -3.7511 | gap 1, overlap 1349967 GCTGGTAGAAGAGAA GC-CCTGCGGGCGGCA CCT CGCCGCCCGCAGGAGC GGTTCAGCGCTGCTG TERM 569 1349997 - 1349967 - T 100 -22.6 -2.84745 | overlap 1349966 CTGGTAGAAGAGAAG CCCTGCGGGCGGCA CCT CGCCGCCCGCAGGA GCGGTTCAGCGCTGC Hhal_1243 1350491 - 1350003 - | protein tyrosine phosphatase Hhal_1244 1351277 - 1350504 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase lpxK 1352257 - 1351274 - | tetraacyldisaccharide 4'-kinase TERM 570 1351505 - 1351489 - G 75 -10.1 -4.10161 | overlap 1351490 GATGATCCGGGAAAA CGTGGCG TTC CGCCACA CCGATCCCGACCTCC TERM 571 1352120 - 1352095 - G 91 -8.3 -4.82901 | gap 1, overlap 1352096 TGCCGCCCACAAAAA GGTTGCCGACGA CGA TCACCGGC-ACC GGGGACGCCGGACGG Hhal_1246 1354082 - 1352262 - | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Hhal_1247 1354514 - 1354092 - | biopolymer transport protein ExbD/TolR Hhal_1248 1355143 - 1354511 - | MotA/TolQ/ExbB proton channel Hhal_1249 1357336 - 1355204 - | ComEC/Rec2-related protein TERM 572 1355722 - 1355690 - G 70 -8.4 -3.85698 | gap 1, overlap 1355691 CCGGGCTTCGAGAAA CGGCTCGACAGCAAC GCTC GCCGC-GTCGAGCCC CCCTCCGGGACCCCC Hhal_1250 1357460 - 1358020 + | hypothetical protein Hhal_1251 1358733 - 1358017 - | lipoprotein releasing system, ATP-binding protein Hhal_1252 1359970 - 1358726 - | LolC/E family lipoprotein releasing system, transmembrane protein Hhal_1253 1360700 - 1359975 - | sugar fermentation stimulation protein Hhal_1254 1360777 - 1361937 + | peptidyl-arginine deiminase TERM 573 1362556 - 1362610 + G 70 -8.3 -3.85698 | gap 1, opp_overlap 1362560, overlap 1362599 GCGGTCACGCCATCA CCAACGGTCTGC-CGGTGGCGGCCTG CAAC CGGGTCGGCACCGAGCCGGCCGCCCG TTTCTGGGGGCGCAG Hhal_1255 1361934 - 1362836 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Hhal_1256 1362877 - 1363263 + | membrane protein-like protein TERM 574 1363414 - 1363444 + G 88 -14.6 -3.72027 | TACCGGGACGCCGCA GCAGGCCGCCGCCT TGC AGGAGGCGGTCGGC TTCTTCCTCGGCGAT TERM 575 1365362 - 1365342 - g 70 -12.6 -3.33214 | overlap 1365340 AGGGCAACGAGAAGA CGCTGGCA CGGAT TGCCAGCG GCGAGGCCGACGTGG Hhal_1257 1363268 - 1366711 + | transcription-repair coupling factor Hhal_1258 1366708 - 1367514 + | hypothetical protein TERM 576 1367592 - 1367574 - T 74 -13.1 -3.28712 | opp_overlap 1367589 GTGGCGCCGGGAGAA GCGGGGC TGGGC GCCCCGC CTAGCTCAGTGAGGC Hhal_1259 1368324 - 1367593 - | purine phosphorylase family 2 Hhal_1260 1368917 - 1368324 - | phosphoribosyltransferase Hhal_1261 1369995 - 1368955 - | Beta-N-acetylhexosaminidase Hhal_1262 1370563 - 1370021 - | ErfK/YbiS/YcfS/YnhG family protein Hhal_1263 1371024 - 1370551 - | adenylate cyclase TERM 577 1371550 - 1371517 - g 70 -15.3 -2.80816 | gap 1 GGCGCAGCTACGATA CGC-CGCCCCCGGCAC TCG ATGCCGAGGACGAGCG TCACCCGCGCCACGA Hhal_1264 1371162 - 1371854 + | phosphoglycerate mutase 1 family protein TERM 578 1372003 - 1371981 - g 91 -14.8 -3.86015 | overlap 1371982 GACGTCGGCGAGAAA CCGGCCACCC GGC GGGTGGCCGT CGCCGAAGGCTGGAT TERM 579 1372002 - 1371982 - g 82 -18.3 -2.91395 | overlap 1371981 ACGTCGGCGAGAAAC CGGCCACCC GGC GGGTGGCCG TCGCCGAAGGCTGGA TERM 580 1372080 - 1372070 - g 83 -8.2 -4.62069 | overlap 1372071 1372072 CGGGGAGCTGAAAAA GGGC GAT GCCC TCGGGACCGCGCGTA Hhal_1265 1371885 - 1372400 + | molybdenum cofactor biosynthesis protein C Hhal_1266 1372726 - 1372397 - | transcriptional coactivator/pterin dehydratase Hhal_1267 1374087 - 1372819 - | hydroxypyruvate reductase Hhal_1268 1374356 - 1375966 + | thiamine biosynthesis protein ThiC TERM 581 1376157 - 1376176 + T 100 -16.4 -5.41143 | ATGACGATGACGTTC GGCCGCCC TCCG GGGCGGCC TTTTTTTGCGCCCTC Hhal_1269 1378291 - 1376249 - | exodeoxyribonuclease V, alpha subunit Hhal_1270 1382010 - 1378288 - | exodeoxyribonuclease V, beta subunit TERM 582 1380917 - 1380890 - G 74 -12.6 -3.56821 | AGCAGATCCTGGAAA CCGAGCTGCGCC CGGC GGCGCTGCTCCG CCTGAAAACGCCTGG Hhal_1271 1385491 - 1381997 - | exodeoxyribonuclease V, gamma subunit TERM 583 1384014 - 1383996 - G 71 -11.6 -3.57144 | TCGGTGATCCCGAAA CGCCGCCG CAA CGCCGGCG CCTCGAGCAGATCGA Hhal_1272 1385946 - 1385569 - | putative thiol-disulphide oxidoreductase DCC Hhal_1273 1386161 - 1386703 + | NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 TERM 584 1386830 - 1386794 - T 100 -21 -4.1673 | opp_overlap 1386787 1386799, overlap 1386799 GAACGCCCCAACAAA GAAAAGCCCTGAGCCG TATTC CGGCTCAGGGCTTTGC GGAGGACTGTTTTGT TERM 585 1386799 - 1386825 + T 100 -19.5 -3.53563 | opp_overlap 1386794 1386799, overlap 1386787 CCCCAACAAAGAAAA GCCCTGAGCCG TATTC CGGCTCAGGGC TTTGCGGAGGACTGT TERM 586 1386825 - 1386799 - T 100 -19.5 -5.09762 | opp_overlap 1386799 1386787, overlap 1386794 CCCCAACAAAGAAAA GCCCTGAGCCG TATTC CGGCTCAGGGC TTTGCGGAGGACTGT TERM 587 1386834 - 1386847 + T 71 -3.8 -4.49556 | overlap 1386787 1386830 TCAGGGCTTTGCGGA GGAC TGTTTT GTCC TTTGTTTGGTGGAGC Hhal_1274 1388414 - 1386996 - | glutamyl-tRNA synthetase TERM 588 1388409 - 1388421 + g 83 -5.5 -4.93365 | ACGCGTACGGATCAT GGTCA TGG TGGCC TTTTTCCTTCTCCCC Hhal_1276 1390304 - 1389273 - | integrase catalytic subunit TERM 589 1389853 - 1389863 + g 70 -8.2 -3.85698 | overlap 1389831 GTGCGCCGCCGTTGC CCGC GCT GCGG TTTCTGGCGGCGAAG TERM 590 1390438 - 1390416 - R 70 -2.6 -4.66318 | overlap 1390418 1390419 ACCAGTCCAAGAAAA TAGCCGCATA CCC TAAGCGGACA ATAGCGGGCGGGCGT TERM 591 1390755 - 1390732 - R 93 -13.8 -4.13767 | GCCCCCACCCGAAAA GGACCGCCGA GGCT CCGGCGGCCC CGCGGCGCCGTGGGG Hhal_1277 1391432 - 1390848 - | hypothetical protein Hhal_1278 1391732 - 1392160 + | putative prophage repressor Hhal_1279 1392160 - 1393431 + | DNA-directed DNA polymerase Hhal_1280 1393526 - 1394254 + | hypothetical protein Hhal_1281 1394272 - 1394487 + | hypothetical protein Hhal_1282 1395961 - 1394720 - | helix-hairpin-helix DNA-binding motif-containing protein Hhal_1283 1396145 - 1397146 + | transcriptional regulator-like protein TERM 592 1397165 - 1397191 + T 70 -5 -4.3953 | opp_overlap 1397158, overlap 1397167 ACCATAACCGGCCGC CAACCGCGACAT GAG ATGTCGCAGCCG TTTGTTGTCATTACA Hhal_1286 1399327 - 1398776 - | ISXoo15 transposase TERM 593 1399107 - 1399117 + g 70 -8.2 -3.85698 | overlap 1399085 GTGCGCCGCCGTTGC CCGC GCT GCGG TTTCTGGCGGCGAAG Hhal_1287 1399392 - 1399685 + | transposase IS3/IS911 family protein Hhal_1288 1399733 - 1400548 + | integrase catalytic subunit Hhal_1290 1401710 - 1403038 + | Pyrrolo-quinoline quinone Hhal_1291 1403211 - 1403504 + | transposase IS3/IS911 family protein Hhal_1292 1403501 - 1404007 + | IS3 ORF2 Hhal_1294 1405700 - 1404714 - | hypothetical protein Hhal_1295 1406548 - 1406841 + | IS66 Orf2 family protein TERM 594 1407183 - 1407195 + T 79 -6.2 -4.62872 | overlap 1407181 1407190 CCGACTGCTACTCCG GGCG ATGGC CGCC TTTTTGCGGCTTGCT Hhal_1297 1407615 - 1407334 - | hypothetical protein Hhal_1298 1408085 - 1408447 + | MazG nucleotide pyrophosphohydrolase Hhal_1299 1408456 - 1410906 + | AAA ATPase Hhal_1300 1411428 - 1411057 - | hypothetical protein Hhal_1301 1411571 - 1412098 + | hypothetical protein Hhal_1302 1413349 - 1412420 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 595 1413397 - 1413369 - H 80 -4.6 -4.82901 | overlap 1413371 GGGTGCGGATAAAAA CTTGGACTAC AAGATGGGA GTAGTCCATG TACACGTACGAGCAG Hhal_1303 1413395 - 1414927 + | integrase catalytic subunit Hhal_1304 1416803 - 1415124 - | diguanylate cyclase TERM 596 1416014 - 1416030 + g 76 -8 -4.32034 | GTTGCCCGACGGCGC GCTGGA AACGC TCCAGC TTTTGGTCCTGCTGC TERM 597 1416885 - 1416832 - R 93 -14.3 -4.07568 | opp_overlap 1416830 1416875 CCGTGCTCGCTAAAA GGGGGGCGCGCCACACGGGGCGCCC CGAG GGGCGCCCCGTGTGGATCATCGGAC GATCATTGTCTCGAA Hhal_1305 1417714 - 1417061 - | hypothetical protein TERM 598 1417439 - 1417416 - G 70 -12.4 -3.35813 | TGCCACTCGAACCAA CCGCTGGCTG GAAT CAGGCAGCGG CGATGGGCGAATGCA Hhal_1306 1418843 - 1418469 - | hypothetical protein TERM 599 1419566 - 1419545 - R 81 -10.9 -4.09685 | gap 1 TGTGAGGGGTCAAAA GCGATG-CGC TCC GCGCCATCGC TCGGCCGCAACGGGG Hhal_1309 1420285 - 1419599 - | hypothetical protein Hhal_1310 1420998 - 1420396 - | hypothetical protein TERM 600 1421057 - 1421034 - R 70 -11 -3.36878 | opp_overlap 1421032 GTGATGCATGGACAA TGGCGGCC TTCCACCC GGCCGCCA GCCTTTCCATCTCAG Hhal_1311 1422976 - 1421753 - | helix-hairpin-helix DNA-binding, class 1 Hhal_1312 1423496 - 1423146 - | hypothetical protein TERM 601 1423715 - 1423765 + r 70 -5.3 -4.36914 | gap 2, overlap 1423716 CAGGCCCTGGCCGTC TTCGGGACAGCGGAGCGGCCGTCAG TCG CTG-CGCCCGCGCAGCTGATC-GAG TTTTGTCCGGACCCG Hhal_1313 1424038 - 1423736 - | hypothetical protein Hhal_1314 1424273 - 1425364 + | beta-lactamase domain-containing protein TERM 602 1425768 - 1425789 + F 84 -13.7 -3.64822 | gap 1, opp_overlap 1425762 TCTAATGCACACCGC GGCC-CGCGC CCT GCGCGCGGCC TTTGAGTCGCACAGT Hhal_1315 1425981 - 1426616 + | MgtE integral membrane region TERM 603 1426679 - 1426642 - f 71 -13.4 -3.03159 | gap 2, overlap 1426631 1426632 CGAACCCGGCGAAGA CGCCCCGGGCGC-G-CCG CCAC CGACCAGCGCCCGGGGCC TTCAGACCAACCGAC Hhal_1316 1426711 - 1427400 + | hypothetical protein TERM 604 1427416 - 1427444 + T 76 -13.8 -3.06796 | opp_overlap 1427416 CCCAGGCGAAGGGAA GCCGGCGGAGCC GATGG GGATTCGCCGGC TTCCCTGCAATGCAA Hhal_1317 1427930 - 1427559 - | histidine kinase Hhal_1318 1429667 - 1428063 - | Na+/Pi-cotransporter Hhal_1319 1430263 - 1429751 - | hypothetical protein Hhal_1320 1430742 - 1430260 - | response regulator receiver protein TERM 605 1431068 - 1431031 - R 90 -7.7 -4.87665 | gap 1, overlap 1431042 GCGGATTGATAAAAA TCGGCAACGCAGGCAATC CGT GACTGCCTG-GCATCCGA AGATCTCAGGGCGGA TERM 606 1431120 - 1431171 + r 100 -28 -3.05384 | gap 1 GGCCGGCCCGTCGAA CC-CGGCCGCTCCGCAGGTCGCCGC CGG GCGGCGGCTGGCGGGGCGGCTGAGG TTAGATCAGGGCGCG Hhal_1321 1432084 - 1431434 - | hypothetical protein TERM 607 1431893 - 1431932 + g 73 -7.1 -4.10657 | gap 1, opp_overlap 1431871 CAGATAACTCTCCTG CCGACTGGCCGACCATCG ACTGA CGATG-TGGACCAGGCGG TTTTGCGCGCTCTGC Hhal_1322 1432218 - 1433042 + | hypothetical protein Hhal_1323 1433164 - 1433928 + | short-chain dehydrogenase/reductase SDR TERM 608 1433958 - 1433929 - T 71 -12.1 -3.272 | gap 1 ATGACGGCACACTAA GCTACCGCGC-GCG GGC CGCTGCACGGTGGC CCGCTGCCGTCACGG Hhal_1324 1434627 - 1433968 - | cytochrome B561 Hhal_1325 1434842 - 1435297 + | cytochrome c, class II Hhal_1326 1435372 - 1435638 + | hypothetical protein Hhal_1327 1436165 - 1435677 - | hypothetical protein Hhal_1328 1436320 - 1438338 + | histidine kinase Hhal_1329 1439267 - 1438317 - | short-chain dehydrogenase/reductase SDR Hhal_1330 1439358 - 1439678 + | cytochrome c553-like protein TERM 609 1440452 - 1440481 + G 71 -9.9 -3.71378 | gap 1, overlap 1440453 TGATCGAGTGGGTCC CCGGCTCCGAGGGC GGC GCCC-CGGAGCGGC TTTCGGTGTCGGATC Hhal_1331 1439692 - 1440996 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 610 1441708 - 1441742 + G 81 -12.9 -3.85698 | gap 1, opp_overlap 1441734 CCGGTGGGCGTGCGC GCCGACGTGCTCGTCG GCGA CGAAGAGCGCGT-GGC TTTCTCCGGCGAGGC Hhal_1332 1441060 - 1443150 + | AsmA family protein Hhal_1333 1443165 - 1443557 + | putative PAS/PAC sensor protein TERM 611 1443559 - 1443577 + F 70 -5.8 -4.30576 | CCCCGGCAGCCTGAT GGCGGCGG CTA CCACGGCC TTTTGCTGCTCGGCG Hhal_1334 1443685 - 1443930 + | hypothetical protein Hhal_1335 1444458 - 1443973 - | hypothetical protein Hhal_1336 1445032 - 1444541 - | Sel1 domain-containing protein Hhal_1337 1445094 - 1445474 + | putative PAS/PAC sensor protein Hhal_1338 1445413 - 1446294 + | histidine kinase Hhal_1339 1446291 - 1447778 + | integral membrane sensor signal transduction histidine kinase Hhal_1340 1447775 - 1449148 + | two component, sigma54 specific, Fis family transcriptional regulator Hhal_1341 1450326 - 1449145 - | hypothetical protein Hhal_1342 1452725 - 1450332 - | helicase domain-containing protein Hhal_1343 1454195 - 1452741 - | uroporphyrin-III C-methyltransferase Hhal_1344 1455512 - 1454205 - | precorrin-3B C17-methyltransferase Hhal_1345 1455907 - 1455509 - | cobalamin (vitamin B12) biosynthesis CbiG protein TERM 612 1455561 - 1455571 + g 70 -8.2 -3.93695 | overlap 1455557 CGTCCGTCTTCGCCC CGCC AGC GGCG TTTCTCGATGATCAG TERM 613 1455746 - 1455718 - G 70 -4.3 -4.52589 | overlap 1455721 TCGCCGGATAGAAAA CCAGGGGCCAGCC ATG GACCCGCGCCAGG GCGTGGAGCGCCGGC Hhal_1346 1456647 - 1455907 - | cobalamin (vitamin B12) biosynthesis CbiG protein TERM 614 1456472 - 1456423 - G 100 -22.9 -3.4252 | gap 1, overlap 1456431 GCCCACCGAGCAGAA GCAGACGACCTGGCGCAGCGCCCC CGC GAAGCGCTCCGCCAGGGCG-CTGC CCAGGGCCCCGGCCG TERM 615 1456477 - 1456431 - G 87 -23.1 -2.72031 | gap 1, overlap 1456423 AGCAGAAGCAGACGA CCTGGCGCAGCGCCCCCGCGAA GCGC TCCGCCAGGGCGCTGC-CCAGG GCCCCGGCCGCCACC Hhal_1347 1457396 - 1456644 - | precorrin-2 C20-methyltransferase Hhal_1348 1458688 - 1457393 - | precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit Hhal_1349 1459353 - 1458685 - | precorrin-8X methylmutase CbiC/CobH Hhal_1350 1460190 - 1459366 - | cobalamin (vitamin B12) biosynthesis CbiX protein Hhal_1351 1460982 - 1460203 - | precorrin-4 C11-methyltransferase Hhal_1352 1461767 - 1460979 - | ABC transporter related Hhal_1353 1462855 - 1461764 - | transport system permease protein Hhal_1354 1463963 - 1462848 - | periplasmic binding protein Hhal_1355 1464499 - 1465674 + | metal dependent phosphohydrolase Hhal_1356 1466239 - 1465676 - | hypothetical protein Hhal_1357 1466320 - 1467519 + | metal dependent phosphohydrolase Hhal_1358 1467551 - 1468789 + | diguanylate cyclase Hhal_1359 1468847 - 1469590 + | glutamine amidotransferase class-I Hhal_1360 1470728 - 1469631 - | hypothetical protein Hhal_1361 1471188 - 1470766 - | molybdopterin biosynthesis MoaE Hhal_1362 1472956 - 1471214 - | lipid ABC transporter ATPase/inner membrane protein Hhal_1363 1473172 - 1473513 + | high potential iron-sulfur protein TERM 616 1473562 - 1473583 + F 100 -15.1 -5.26316 | opp_overlap 1473562 CTGGCGGAACGACAA GGGGGCGCC CGGC GGCGCTCCC TTTTTTATACCCTGA TERM 617 1473583 - 1473562 - f 78 -12.9 -3.50853 | opp_overlap 1473562 CTGGCGGAACGACAA GGGGGCGCC CGGC GGCGCTCCC TTTTTTATACCCTGA Hhal_1364 1473641 - 1474318 + | heme exporter protein CcmA Hhal_1365 1474328 - 1474996 + | heme exporter protein CcmB Hhal_1366 1475090 - 1475914 + | heme exporter protein CcmC Hhal_1367 1475914 - 1476102 + | heme exporter protein D Hhal_1368 1476106 - 1476555 + | CcmE/CycJ protein Hhal_1369 1476558 - 1478582 + | cytochrome c-type biogenesis protein CcmF Hhal_1370 1478579 - 1479112 + | periplasmic protein thiol--disulphide oxidoreductase DsbE TERM 618 1479165 - 1479187 + G 85 -11.2 -4.36411 | overlap 1479145 CGAGACCCCGCGGGG GCTCCGCGAG CTG CTCGTGGCGC TTTTCCTGCTTGCTG Hhal_1371 1479109 - 1479636 + | cytochrome C biogenesis protein Hhal_1372 1479652 - 1480548 + | TPR repeat-containing protein Hhal_1373 1481054 - 1480602 - | hypothetical protein Hhal_1374 1481211 - 1482821 + | nitrite reductase (cytochrome; ammonia-forming) Hhal_1375 1482844 - 1483299 + | hypothetical protein Hhal_1376 1485453 - 1483363 - | oligopeptidase B TERM 619 1484665 - 1484641 - G 83 -14.9 -3.67296 | CATGAGGCAGCGAAA GCCGGCCGCCG GGT CGTCGGCCAGC GCAGCGTGGACCTCC TERM 620 1484864 - 1484820 - G 70 -8.4 -3.87373 | gap 1, overlap 1484862 GACAGTGGCGATAAA CCCAGCGCGGC-CGGTGCTCG TCAT CGAGCACCGTATAGAGCAGGG TCTGGCCGTCGCCGG Hhal_1377 1485913 - 1485455 - | thioesterase superfamily protein Hhal_1378 1486364 - 1485906 - | hypothetical protein TERM 621 1486480 - 1486465 - H 75 -11.8 -3.44529 | GCAGAGATCAAGCAA CGCGCC GGGC GGCGCG GCGCACCGGGGTGCT Hhal_1379 1486648 - 1488000 + | membrane protein involved in aromatic hydrocarbon degradation TERM 622 1488274 - 1488312 + G 78 -13.2 -3.63515 | GTGCAGGTGCGCTTC GACCCCGAGCAGATCA GCTACCG TGAGCTGCTCGAGGTC TTCTTCACCATCCAC Hhal_1380 1488088 - 1488630 + | peptide methionine sulfoxide reductase Hhal_1381 1488691 - 1489488 + | response regulator receiver protein Hhal_1382 1490573 - 1489485 - | permease TERM 623 1489563 - 1489521 - G 72 -14 -3.14211 | ACCGCGCGCCACGAA CCAGGCCCAGTGGGCGGC GCGCCAG ACCGCCCGCCGAGCCGGG GCGAAGATCAGCGTG Hhal_1383 1491258 - 1490662 - | thiopurine S-methyltransferase TERM 624 1491014 - 1490969 - G 70 -14.7 -2.79796 | gap 1, opp_overlap 1490963 TGCCAGGCCAGCAGA TCGGCCTGGAC-CACCCGGG CCTCCAC CCCGGCCGCGTCCAGGCCGT CGCGTAGTTGCTGAC Hhal_1384 1492839 - 1491265 - | choline/carnitine/betaine transporter Hhal_1385 1493423 - 1492860 - | hypothetical protein Hhal_1386 1493538 - 1494827 + | hypothetical protein Hhal_1387 1496906 - 1494813 - | protein of unknown function DUF699, ATPase putative Hhal_1388 1500841 - 1496903 - | ATP-dependent helicase HrpA TERM 625 1500317 - 1500352 + g 72 -13.4 -3.18264 | gap 1, overlap 1500339 GGCCAGCAGCATGCC GTCGGTGAGCAG-CTTG ACC CGACTCTGCTCACCGAC TTGGTCGGTAAAGCG Hhal_1389 1501387 - 1500851 - | phosphodiesterase Hhal_1390 1502029 - 1501421 - | phosphoserine phosphatase Hhal_1391 1502243 - 1502923 + | hypothetical protein TERM 626 1502945 - 1502971 + T 70 -11.4 -3.40597 | opp_overlap 1502945, overlap 1502943 1502946 ACACCGGGGCACGAA TCGGGCCGGGCG CGA TGCCCGGCCCCC TCTTTCCATCCCGGA TERM 627 1502946 - 1502970 + T 74 -14.9 -2.64144 | opp_overlap 1502945, overlap 1502945 1502943 CACCGGGGCACGAAT CGGGCCGGGCG CGA TGCCCGGCCCC CTCTTTCCATCCCGG Hhal_1392 1504324 - 1503047 - | seryl-tRNA synthetase Hhal_1393 1505695 - 1504412 - | recombination factor protein RarA Hhal_1394 1506318 - 1505692 - | outer membrane lipoprotein carrier protein LolA TERM 628 1506414 - 1506373 - H 89 -18.7 -2.79133 | gap 1 CAACCGTTCAGGATA GCCCTGCTGAC-GCGGGGCG TCA CGCCCCGGTGCCAGCAGGCC GGGCCAACGCCCCCA TERM 629 1506907 - 1506926 + G 70 -15 -2.73721 | overlap 1506889 GTCGCCAGCCACGGG GCCGCAGC AGCT GCTGCGGC TGGTTACGCCTTCCT Hhal_1395 1506487 - 1507680 + | diguanylate cyclase Hhal_1396 1510203 - 1507690 - | cell divisionFtsK/SpoIIIE TERM 630 1510084 - 1510051 - G 79 -14.5 -3.30474 | opp_overlap 1510077, overlap 1510044 GGCCAGAAGCATGAA GGCGGCCACGCCGCC GAGC AGCACCATGGCCGCC TCGCGCAGGCGACGC aat 1510316 - 1511059 + | leucyl/phenylalanyl-tRNA--protein transferase TERM 631 1511467 - 1511479 + G 75 -5.5 -4.54047 | overlap 1511466 1511468 TTCCTTGCTGCCCCG TGGTG CAC CACCG TTTTCTATGAGCTAC Hhal_1398 1511056 - 1511766 + | arginyl-tRNA-protein transferase Hhal_1399 1511888 - 1512106 + | translation initiation factor IF-1 Hhal_1400 1514438 - 1512168 - | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 632 1513583 - 1513599 + g 71 -2.2 -4.63527 | TCTCGTCGATGAACA GGATGG AGCCG CTGTCC TTTTTGAGCTGGTGG Hhal_1401 1514841 - 1514521 - | ATP-dependent Clp protease adaptor protein ClpS TERM 633 1514938 - 1514909 - R 100 -20.7 -5.67063 | GTCACCATAAAAAAA CCCCGGGGCGGTG GCTA CACCGTCCCGGGG TCCTGAGGCTTCGCG Hhal_1402 1516241 - 1514973 - | isocitrate lyase TERM 634 1515502 - 1515489 - G 71 -2.3 -4.56597 | CTTGGTGCGGAAAAA GCCCT CCGC AGTGC GCTCGCCGGTAATGA TERM 635 1515866 - 1515879 + g 71 -9.5 -3.7282 | GGTTGATCTCGTCGG CGCGC AGCA GCGCG TTGTTGATGCGATCG TERM 636 1516393 - 1516447 + H 73 -13.6 -2.80988 | opp_overlap 1516444, overlap 1516385 1516426 1516437 CAGAACCCGTACCGC TGCGTTTGGCAGGCGTCTGCAGC-CG GGTGG CGCGCTGCCG-CGCCTGACTAACGCG TCATTGATAGTATGG Hhal_1403 1516518 - 1517525 + | LysR family transcriptional regulator TERM 637 1518076 - 1518113 + G 78 -13.3 -3.59979 | gap 1, overlap 1518077 ATCAGAGCTACTTCC TCGC-CGGCGTCCCGCGC CAG GCACTGGACGCCGTGCGC TTTCCCCTGGGCGAC TERM 638 1518077 - 1518112 + G 74 -16.8 -2.75844 | gap 1, overlap 1518076 TCAGAGCTACTTCCT CGC-CGGCGTCCCGCGC CAG GCACTGGACGCCGTGCG CTTTCCCCTGGGCGA Hhal_1404 1517610 - 1518761 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Hhal_1405 1518758 - 1519387 + | hypothetical protein Hhal_1406 1519453 - 1522197 + | aconitate hydratase 1 TERM 639 1522244 - 1522222 - f 100 -20.6 -3.53366 | CAGACCGAAGGACAA GGGGGTGGCC GCG GGCCACCCCC GCCCCTTCCCCGCAG TERM 640 1522575 - 1522586 + F 79 -4.4 -4.86001 | opp_overlap 1522562, overlap 1522562 AACGGGCAGTTGGCG CGTA GTTA TACG TTTTTCTGCGGTGAT Hhal_1407 1522786 - 1522965 + | antenna complex, alpha/beta subunit Hhal_1408 1522980 - 1523195 + | antenna complex, alpha/beta subunit TERM 641 1523237 - 1523262 + F 100 -14.7 -4.77165 | TGACGGCTCGACACT GGGGCGGGGTC CGCG GATCTCGCCCC TTTTCTTGTCAGGAA Hhal_1409 1523283 - 1523771 + | peptide deformylase TERM 642 1523858 - 1523827 - T 100 -23 -5.24129 | overlap 1523828 CCGCTCGACAAAAAA CGGGCGCCCGGACG CACT CGCCCGGGCGCCCA ACCAAGCTGGTGGGC TERM 643 1523857 - 1523828 - T 100 -24.3 -3.73995 | overlap 1523827 CGCTCGACAAAAAAC GGGCGCCCGGACG CACT CGCCCGGGCGCCC AACCAAGCTGGTGGG TERM 644 1523930 - 1523959 + T 75 -15.1 -2.66316 | opp_overlap 1523931 1523937, overlap 1523937 GGTGCGGAGTAACAA AGAAAAACGGGGC GTAT GCCCCGTTTTTCC TCATATCCTGCCGCG TERM 645 1523958 - 1523931 - T 100 -18.6 -4.24342 | opp_overlap 1523930 1523937, overlap 1523937 GTGCGGAGTAACAAA GAAAAACGGGGC GTAT GCCCCGTTTTTC CTCATATCCTGCCGC TERM 646 1523952 - 1523937 - T 100 -11.8 -5.48514 | opp_overlap 1523937 1523930, overlap 1523931 AGTAACAAAGAAAAA CGGGGC GTAT GCCCCG TTTTTCCTCATATCC TERM 647 1523937 - 1523952 + T 100 -11.8 -4.79223 | opp_overlap 1523931 1523937, overlap 1523930 AGTAACAAAGAAAAA CGGGGC GTAT GCCCCG TTTTTCCTCATATCC TERM 648 1524027 - 1523999 - T 100 -19.7 -3.63341 | AAGACCCGGGAAGAA TCTCTCCCGCTCG TGA CGAACGGGAGAGA CTCCTGAGTCACCCG Hhal_1410 1524247 - 1524053 - | antenna complex, alpha/beta subunit Hhal_1411 1524487 - 1524260 - | antenna complex, alpha/beta subunit Hhal_1412 1524833 - 1525798 + | OmpA/MotB domain-containing protein Hhal_1413 1525842 - 1526279 + | thioesterase superfamily protein Hhal_1414 1527197 - 1526295 - | UspA domain-containing protein Hhal_1415 1528371 - 1527208 - | hypothetical protein Hhal_1416 1530895 - 1528364 - | hypothetical protein TERM 649 1529865 - 1529841 - G 76 -7.8 -4.258 | gap 1, overlap 1529844 GCAGCCATGAACAAA GCAGAGGGCGC CAGC GCGACCTC-GC GAACGTTGAGGACGA Hhal_1417 1531680 - 1530892 - | ABC transporter related Hhal_1418 1532095 - 1531658 - | hypothetical protein Hhal_1419 1532726 - 1532190 - | two component Fis family transcriptional regulator Hhal_1420 1534079 - 1532769 - | integral membrane sensor signal transduction histidine kinase Hhal_1421 1534500 - 1534159 - | regulatory protein, ArsR TERM 650 1537136 - 1537164 + G 71 -2.9 -4.63218 | GACCCTGCTGGCCCT GCCGGCGATCG TCGCCTT CGCCCCCCGGC TTTTCTTCCCCCGCG Hhal_1422 1534617 - 1537214 + | RND efflux transporter Hhal_1423 1537218 - 1538063 + | putative outer membrane protein Hhal_1424 1538070 - 1539407 + | hypothetical protein Hhal_1425 1539826 - 1539467 - | regulatory protein, ArsR Hhal_1426 1540731 - 1539865 - | response regulator receiver protein TERM 651 1539943 - 1539967 + g 72 -9.4 -4.08216 | gap 1, opp_overlap 1539932 AAACCGCAGGGTCAT GCGC-AGGATA TCAG TATCCTGGCGC TTTTCGGCCGCCTGC Hhal_1427 1541828 - 1540818 - | RpoD family RNA polymerase sigma factor TERM 652 1541858 - 1541877 + r 73 -12.1 -3.33696 | GGTCTCTAACCGCTC GCCGGGC TTCCCC GCCCGGC TTCCTTGGACAGCCG Hhal_1428 1542824 - 1542087 - | peptidase M23B Hhal_1429 1543407 - 1542832 - | hypothetical protein TERM 653 1542979 - 1542967 - G 82 -6.9 -4.77036 | overlap 1542968 1542969 GGCGACCAGGAAAAA CCGCG CCC CGCGA CCCAGCAGCGAGGCG TERM 654 1543080 - 1543070 - G 75 -4.6 -4.58395 | overlap 1543072 GGGATGGGCGAAAAA CCGG CCA CCAG GACCACCCAGAATCC Hhal_1430 1544076 - 1543414 - | protein-L-isoaspartate O-methyltransferase Hhal_1431 1544831 - 1544076 - | stationary-phase survival protein SurE Hhal_1432 1544921 - 1545490 + | Smr protein/MutS2 truD 1546526 - 1545510 - | tRNA pseudouridine synthase D Hhal_1434 1547014 - 1546523 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Hhal_1435 1547739 - 1547011 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hhal_1436 1548011 - 1547739 - | septum formation initiator Hhal_1437 1549337 - 1548051 - | phosphopyruvate hydratase Hhal_1438 1550189 - 1549353 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 655 1549535 - 1549496 - G 72 -14.2 -3.13403 | gap 1, overlap 1549494 GGGTTTCCATGAACA GCCCCGACACGC-CCGCGG CCA CCGCGGCGCGCGCCAGCAC GGGCACGAACTCCCG TERM 656 1549763 - 1549779 + g 84 -7.9 -4.67234 | GGGTCATGTCCCAAG GGGCAAG GAA CTGGCCC TTTTTCAGGTTGACT Hhal_1439 1551831 - 1550176 - | CTP synthetase Hhal_1440 1552368 - 1551922 - | hypothetical protein TERM 657 1552423 - 1552399 - H 82 -7.1 -4.66163 | opp_overlap 1552400 1552404, overlap 1552400 1552420 ACGGCGACCCAAAAA GGCAGTTGTCG TTA CGACAATTGCT GGTTGTCCCGCAGTG TERM 658 1554343 - 1554312 - g 77 -17.2 -2.6574 | opp_overlap 1554323, overlap 1554303 TAAGGATCGAGAGCA GGCGCGCCAGGCGC TGCA GCGTCTGGCGCGCT ACGGCCGCCACAGCT Hhal_1441 1552480 - 1554465 + | peptidase M1, membrane alanine aminopeptidase Hhal_1442 1555769 - 1554447 - | tRNA(Ile)-lysidine synthetase Hhal_1443 1556731 - 1555775 - | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 659 1555808 - 1555828 + g 80 -16.9 -3.1505 | GATCGCGGCAAGGCG CTGGTGGCG GTC CGCCACCAG TTCATCCGGGCTCAT Hhal_1444 1557220 - 1556837 - | hypothetical protein Hhal_1445 1557237 - 1558187 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 660 1559381 - 1559345 - g 77 -14.5 -3.14468 | opp_overlap 1559345 TTCCAGTACAGCCAA CGCTGGTTCCAATGCCG ATG CAGCATCGGAATCAGCA TGTATCCCGACAACG Hhal_1446 1558196 - 1560292 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Hhal_1447 1560647 - 1560297 - | fumarate reductase, subunit D Hhal_1448 1561042 - 1560644 - | fumarate reductase, 15 kDa hydrophobic protein Hhal_1449 1561803 - 1561039 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein Hhal_1450 1563572 - 1561800 - | fumarate reductase flavoprotein subunit Hhal_1451 1564929 - 1563625 - | hypothetical protein TERM 661 1564692 - 1564720 + g 77 -4.3 -4.68424 | overlap 1564693 CGGAACGGCCCGAGG ACGCCGAGGCGCC TGT GGCTCCTCCACGC TTTTTCCCTGCCTTG Hhal_1452 1565072 - 1565797 + | HAD family hydrolase Hhal_1453 1569345 - 1565794 - | DNA polymerase III, alpha subunit Hhal_1454 1569996 - 1569409 - | ribonuclease H Hhal_1455 1571132 - 1569993 - | lipid-A-disaccharide synthase TERM 662 1570096 - 1570072 - G 72 -9.1 -4.08767 | TGGAGGTGGCGAAAA CGGCCCACCAG CTG CAGGCGGGCGG GGGCGTCGTCGAGCC Hhal_1456 1571942 - 1571166 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase Hhal_1457 1572430 - 1571939 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 663 1572615 - 1572567 - R 81 -16.6 -2.71011 | gap 2 ACGCGTCCCCAACGA CCCGGCGGGGCG-GC-GGACGGCC GTC GGCCGCCCTGCGCGCCTTGCCGTG GCAGCCCTAGAATTC Hhal_1458 1574964 - 1572622 - | surface antigen (D15) TERM 664 1573730 - 1573748 + g 78 -13.8 -3.60792 | overlap 1573731 TCCACCCGGTCGTCC TCCCCCGG CAC CCGGGGGG TTTCGACGTTGACGA TERM 665 1573731 - 1573747 + g 70 -15.1 -2.76261 | overlap 1573730 CCACCCGGTCGTCCT CCCCCGG CAC CCGGGGG GTTTCGACGTTGACG Hhal_1459 1576402 - 1575035 - | putative membrane-associated zinc metalloprotease Hhal_1460 1577582 - 1576410 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Hhal_1461 1578406 - 1577582 - | phosphatidate cytidylyltransferase Hhal_1462 1579178 - 1578399 - | undecaprenyl diphosphate synthase Hhal_1463 1579745 - 1579188 - | ribosome recycling factor pyrH 1580482 - 1579742 - | uridylate kinase TERM 666 1580513 - 1580541 + r 100 -21.7 -2.52516 | overlap 1580513 CTTTTAGTGAGCGGG CGCGGTGCCCGGG CCA CCCGGGCACCGCC GTTGCTGGTAACGCC TERM 667 1580513 - 1580542 + r 100 -21.5 -3.21099 | gap 1, overlap 1580513 CTTTTAGTGAGCGGG C-GCGGTGCCCGGG CCA CCCGGGCACCGCCG TTGCTGGTAACGCCG tsf 1581440 - 1580565 - | elongation factor Ts TERM 668 1581249 - 1581288 + g 74 -11.2 -3.8062 | gap 1 ACCGTCTTCGGAACG GGCCG-CCACGACGCGGCC CTC GGCAGCGACGCGATCGGCC TTCTTGTCGGCCTTG Hhal_1466 1582198 - 1581455 - | ribosomal protein S2 TERM 669 1582763 - 1582743 - g 89 -2.5 -5.32608 | overlap 1582745 AAAAAACTGAAAAAA GGCGACATC CTC AATATCGAC GTCACGGTGATCGAC Hhal_1467 1582389 - 1583243 + | methionine aminopeptidase, type I TERM 670 1583814 - 1583827 + G 86 -9.5 -4.56597 | opp_overlap 1583806 CGGCAAATCGGATCT GGCCG AGTC CGGCC TTTTTCGAGGCCAAG Hhal_1468 1583273 - 1585942 + | metal dependent phosphohydrolase TERM 671 1586703 - 1586719 + G 70 -15.1 -2.72855 | overlap 1586693 1586716 GCGCTCCGGGTTCGT GGCCGGG GAT CCCGGCC TGATTCACGCCTTTC Hhal_1469 1585939 - 1587138 + | aminotransferase, class I and II Hhal_1470 1587149 - 1587970 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Hhal_1471 1587967 - 1589103 + | succinyl-diaminopimelate desuccinylase TERM 672 1589686 - 1589666 - g 71 -10.3 -3.78934 | CGCTTTCGACAAGAA GGGCGGCGG CGA CGGCCACCC CGACGAGGGCTACGG TERM 673 1590268 - 1590222 - g 74 -12.1 -3.63515 | gap 1, opp_overlap 1590250 GGCCAGCTCGAAGAA GCCCGGGCGG-CCGAGGACCCG CCCG CCGGCGCCCGGTCCGGCCAGGC CCTGTTGCGGGTGGC Hhal_1472 1589199 - 1590932 + | hypothetical protein TERM 674 1591072 - 1591125 + G 84 -15.9 -3.53444 | gap 1, opp_overlap 1591086, overlap 1591074 ACCGTGCGCGACTTC CTGGCGCGAATCGAGGCCGCTGTGCC GGC GGCACGGCG-CGGCGATCTGCGCCTG TTTGCCACCGGCTCC TERM 675 1591074 - 1591123 + G 87 -17.1 -3.34517 | gap 1, opp_overlap 1591086, overlap 1591072 CGTGCGCGACTTCCT GGCGCGAATCGAGGCCGCTGTGCC GGC GGCACGGCG-CGGCGATCTGCGCC TGTTTGCCACCGGCT TERM 676 1591353 - 1591333 - g 83 -12.5 -4.08144 | overlap 1591334 GCCATGAACGACAAA TGCGCCGGT GGC ACCGGCGCC GTGATCGACAAAATC TERM 677 1591352 - 1591334 - g 78 -16 -3.04404 | overlap 1591333 CCATGAACGACAAAT GCGCCGGT GGC ACCGGCGC CGTGATCGACAAAAT Hhal_1473 1590916 - 1594329 + | putative CoA-substrate-specific enzyme activase Hhal_1474 1595175 - 1594372 - | dihydrodipicolinate reductase Hhal_1475 1596329 - 1595172 - | chaperone protein DnaJ TERM 678 1596397 - 1596362 - R 78 -16.2 -2.7185 | gap 1, overlap 1596366 AGCACCCGGTAACGA CAAAGGCGCAGGA-GGG TAT CCCACCCTGCGCCTCCG CTGTGGCGGCGGCCC TERM 679 1596393 - 1596366 - R 95 -15.6 -4.05446 | gap 1, overlap 1596362 CCCGGTAACGACAAA GGCGCAGGA-GGG TAT CCCACCCTGCGCC TCCGCTGTGGCGGCG Hhal_1476 1598383 - 1596440 - | chaperone protein DnaK Hhal_1477 1599223 - 1598501 - | GrpE protein TERM 680 1599265 - 1599308 + r 80 -15.4 -2.80816 | opp_overlap 1599254 1599263, overlap 1599267 AAAACGGTCAACACG CAGCGCACC-GCCCGACGGC TCGGGC GCC-TCGGCCGGGTGCGCTG TCTCCTGCCTGGACA Hhal_1478 1600392 - 1599337 - | heat-inducible transcription repressor HrcA Hhal_1479 1600546 - 1601469 + | NAD(+) kinase Hhal_1480 1601481 - 1603151 + | DNA repair protein RecN Hhal_1481 1603617 - 1603195 - | ferric uptake regulator family protein Hhal_1482 1603672 - 1604007 + | SmpA/OmlA domain-containing protein TERM 681 1604023 - 1604057 + T 84 -14.3 -3.60296 | gap 1 CCCCTGGTCATTCAG GAGGCCTTGCGGGCGG CACG CCGCTTGC-GGGCCTC TTTCGGATCCACCTG Hhal_1483 1604312 - 1604019 - | hypothetical protein Hhal_1484 1604748 - 1604302 - | cyclase/dehydrase TERM 682 1604932 - 1604904 - g 89 -6.7 -5.18355 | CGGAAAAAGCAAAAA GACCGAAGGCAAC GTC ATCGCCCTCAATC GCAAGGCGGGCTTCG smpB 1604866 - 1605363 + | SsrA-binding protein TERM 683 1605849 - 1605866 + T 70 -14.1 -2.59564 | opp_overlap 1605849, overlap 1605848 GCACATCACCTGAAA CGCCCGC CAAG GCGGGCG CTTCTCCGATCGCAA TERM 684 1605866 - 1605849 - T 84 -14.1 -3.63068 | opp_overlap 1605848 1605849 GCACATCACCTGAAA CGCCCGC CAAG GCGGGCG CTTCTCCGATCGCAA Hhal_1486 1606479 - 1605976 - | hypothetical protein Hhal_1487 1607003 - 1606473 - | hypothetical protein TERM 685 1607102 - 1607050 - R 74 -11.2 -3.56092 | gap 1, opp_overlap 1607049 1607056 1607056 1607057, overlap 1607054 1607055 CGAGCAGGGGCCAAA CGAACCGTGCGCCACCTGGTCCCTC TGCG GAGGGATCGGGCGGCGCA-GTCTTG GGTTTGCAGAAGCCG TERM 686 1607098 - 1607054 - R 78 -12.8 -3.51708 | gap 1, opp_overlap 1607049 1607056 1607056 1607057, overlap 1607050 1607055 CAGGGGCCAAACGAA CCGTGCGCCACCTGGTCCCTC TGCG GAGGGATCGGGCGGCGCA-GT CTTGGGTTTGCAGAA TERM 687 1607097 - 1607055 - R 81 -16.3 -2.70704 | gap 1, opp_overlap 1607049 1607056 1607056 1607057, overlap 1607054 1607050 AGGGGCCAAACGAAC CGTGCGCCACCTGGTCCCTC TGCG GAGGGATCGGGCGGCGCA-G TCTTGGGTTTGCAGA TERM 688 1607056 - 1607097 + r 93 -18.7 -3.20349 | opp_overlap 1607055 1607054 1607050, overlap 1607056 1607049 1607057 GGGGCCAAACGAACC GTGCGCCACCTGGTCCCTC TGCG GAGGGATCGGGCGGCGCAG TCTTGGGTTTGCAGA TERM 689 1607056 - 1607099 + r 71 -12.5 -3.27525 | gap 2, opp_overlap 1607055 1607054 1607050, overlap 1607049 1607056 1607057 GGGGCCAAACGAACC G--TGCGCCACCTGGTCCCTC TGCG GAGGGATCGGGCGGCGCAGTC TTGGGTTTGCAGAAG TERM 690 1607057 - 1607096 + r 100 -22.2 -2.51888 | opp_overlap 1607055 1607054 1607050, overlap 1607056 1607056 1607049 GGGCCAAACGAACCG TGCGCCACCTGGTCCCTC TGCG GAGGGATCGGGCGGCGCA GTCTTGGGTTTGCAG Hhal_1488 1607485 - 1607165 - | high potential iron-sulfur protein Hhal_1489 1607798 - 1608145 + | histone family protein nucleoid-structuring protein H-NS TERM 691 1608237 - 1608205 - f 74 -13.5 -3.21354 | gap 2 CCAGACACGCACGAA CCG-C-CCGGGCCAG TCGCC CTGGCCCGGTGACGG TTGGACAAACCGGCG TERM 692 1609286 - 1609259 - g 73 -12.6 -3.53444 | opp_overlap 1609236 CGATCTGGTCGGAAA CCGCCCAGGCGG TTTA CGGCCTGGCCGG ACTGCTGGAACGAGG Hhal_1490 1608274 - 1610265 + | hypothetical protein Hhal_1491 1611574 - 1610345 - | hypothetical protein TERM 693 1610732 - 1610721 - G 73 -7.2 -4.21827 | overlap 1610722 TCAAAGACCTTAAAA CCGG GCGG CCGG TAAGCCACCTCGCCG Hhal_1492 1613401 - 1611764 - | electron-transferring-flavoprotein dehydrogenase TERM 694 1612654 - 1612607 - G 80 -16.3 -3.23274 | overlap 1612602 GTTTTCATAATCCAA CCCCACCACCAGGCCGATCGC AACACG GCGATCATCCAGGTGGTAGAG GAAACTACCGCCGTA TERM 695 1613005 - 1613063 + g 86 -20.8 -2.71681 | opp_overlap 1612989, overlap 1613062 CGGGGTAGATCTCGA CGCCGGCCGCCTCGGCCTGCTCGGCGAG CCA CTGCCCGAGTTCGCCGAGGCTGCCGACG TAGTTGCCACGATTC Hhal_1493 1615195 - 1613414 - | acyl-CoA dehydrogenase domain-containing protein TERM 696 1614048 - 1614096 + g 80 -18.2 -2.87564 | gap 2, opp_overlap 1614036 AGATCCACCCGGCGC TGGGCGCT-CTGG-CGCGCCGCCG CGT CGGCGGCGTGCCCGGCAACGTCCA TCTCTGCCGCGGTCA Hhal_1494 1616130 - 1615192 - | electron transfer flavoprotein, alpha subunit Hhal_1495 1616881 - 1616132 - | electron transfer flavoprotein beta-subunit Hhal_1496 1617038 - 1617844 + | hypothetical protein Hhal_1497 1617924 - 1619225 + | hypothetical protein Hhal_1498 1619686 - 1619219 - | GCN5-related N-acetyltransferase Hhal_1499 1619714 - 1621039 + | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Hhal_1500 1621043 - 1623079 + | peptidase S15 Hhal_1501 1624122 - 1623076 - | hypothetical protein TERM 697 1624149 - 1624165 + H 71 -9.3 -3.73775 | opp_overlap 1624150, overlap 1624150 TCCAAACAGCCAGAA AGGCGCG CGG CGCGCCC TTTGCTAAACCTAGC TERM 698 1624164 - 1624150 - H 89 -12.8 -3.99957 | opp_overlap 1624150 1624149 CCAAACAGCCAGAAA GGCGCG CGG CGCGCC CTTTGCTAAACCTAG Hhal_1502 1624285 - 1625094 + | peptidase S1 and S6, chymotrypsin/Hap Hhal_1503 1625104 - 1627032 + | hypothetical protein TERM 699 1627060 - 1627046 - f 79 -11.4 -3.86194 | AACCGCGGCGATAAA GCGCAC GGG GTGCGC GCCTGAGTCCCGCCC Hhal_1504 1627180 - 1628409 + | cyclopropane-fatty-acyl-phospholipid synthase Hhal_1505 1628479 - 1628949 + | cyclic nucleotide-binding protein TERM 700 1629171 - 1629158 - g 76 -2.3 -4.71828 | overlap 1629159 1629170 AGTCGACCAAGAAAA CCTCG GAAA CGAGC ACCAAGAGCAGCACC Hhal_1506 1629106 - 1629765 + | hypothetical protein TERM 701 1629850 - 1629792 - f 78 -14.4 -3.24245 | opp_overlap 1629801, overlap 1629800 CGACCCACAAGCTAA GCCAACGACCCCGACTTGCCGGCCCCAC CCC GAGCGGCTGGCAAGTCGGGTTTTTTGTC CCCTGCCACTTCCCC TERM 702 1629842 - 1629800 - f 87 -17.6 -2.79456 | opp_overlap 1629801, overlap 1629792 AAGCTAAGCCAACGA CCCCGACTTGCCGGCCCCAC CCC GAGCGGCTGGCAAGTCGGGT TTTTTGTCCCCTGCC TERM 703 1629801 - 1629841 + F 100 -23.3 -5.26316 | opp_overlap 1629800 1629792 AGCTAAGCCAACGAC CCCGACTTGCCGGCCCCAC CCC GAGCGGCTGGCAAGTCGGG TTTTTTGTCCCCTGC Hhal_1507 1629989 - 1631521 + | lipopolysaccharide biosynthesis Hhal_1508 1633263 - 1631518 - | hypothetical protein TERM 704 1632554 - 1632540 - G 70 -3.4 -4.46212 | CGCCGGACGACAAAA CGCCGC CGA GCACCG CCATCAGGCAGGCGT Hhal_1509 1634531 - 1633254 - | glycosyl transferase, group 1 TERM 705 1634209 - 1634239 + g 79 -11 -4.07568 | CGCAGGGTGGGCAAC GCCCCGAGGGCCTG GAA CAGACCGTCGAGGC TTTTCAGCACACCCG Hhal_1510 1635781 - 1634534 - | glycosyl transferase, group 1 TERM 706 1635034 - 1635005 - G 70 -9.3 -3.89957 | gap 1 GCCAACAATCAACAA CCGCG-CCGCAC TCCCGCC GTGCAGCCGCGG CGCCATCGCCTCCAG Hhal_1511 1637091 - 1635778 - | CoA ligase Hhal_1512 1639001 - 1637088 - | asparagine synthase (glutamine-hydrolyzing) Hhal_1513 1640207 - 1639008 - | glycosyl transferase, group 1 Hhal_1514 1641796 - 1640204 - | eight transmembrane protein EpsH Hhal_1515 1643027 - 1641774 - | glycosyl transferase, group 1 TERM 707 1642514 - 1642488 - G 78 -6.5 -4.55295 | gap 1, opp_overlap 1642491 1642503, overlap 1642491 1642492 GTCCGTAGAAACAAA CAAGCTGGCGTC GCTC GACGCC-GCCAG GTGTCGTTCGTAGGC TERM 708 1642511 - 1642491 - G 82 -9 -4.38748 | gap 1, opp_overlap 1642491 1642503, overlap 1642488 1642492 CGTAGAAACAAACAA GCTGGCGTC GCTC GACGCC-GC CAGGTGTCGTTCGTA TERM 709 1642829 - 1642795 - G 79 -7.7 -4.42386 | gap 1, overlap 1642796 1642797 TCTCCAGTGAGAAAA CCGCCA-AGCGCGCGC AGCT GCGCCCGCCGCCGCGG CAGTGGACGCGCGCA TERM 710 1642854 - 1642796 - G 77 -14.6 -3.2511 | gap 3, overlap 1642795 1642797 CTCCAGTGAGAAAAC CGCCAAGCGCGCGCAGCTGCGCCCGCCGC CGCG GCAGTGGACGC-GC-GCACACGCTC-GCG CAAACCGCTTCCAGG Hhal_1516 1644067 - 1643036 - | hypothetical protein TERM 711 1644003 - 1643987 - G 71 -2.1 -4.56597 | overlap 1643988 GCTGCGGTGGAAAAA GGTGGCC TCC GGCGACT GCTGAACGAAAGCGT Hhal_1517 1645021 - 1644116 - | polysaccharide deacetylase Hhal_1518 1646187 - 1645072 - | AAA ATPase TERM 712 1646089 - 1646109 + g 88 -14.7 -3.74693 | CCCATACTCCAGGTA GGCCATCGC CCG GCGGTGGCC TTTGCTGGCGTAGAA Hhal_1519 1647685 - 1646195 - | hypothetical protein Hhal_1520 1648658 - 1647660 - | hypothetical protein Hhal_1521 1650218 - 1648674 - | lipopolysaccharide biosynthesis TERM 713 1649602 - 1649590 - G 81 -3.3 -4.84017 | AAGCGGCTATAAAAA TCGCC GCC GGCCA ACAGAACCTCCGAGT TERM 714 1650691 - 1650705 + G 77 -3.4 -4.72272 | GACCCCATGCTCTAC CGCCGC CTG GTCGCG TTTTTCCTGGCGACC Hhal_1522 1650550 - 1651119 + | type IV pilus assembly PilZ TERM 715 1651187 - 1651197 + F 80 -5.4 -4.75174 | AGTCCTTTACCCCAC CGAT AAT ATCG TTTTTACCTTAAATG Hhal_1523 1651298 - 1652032 + | hypothetical protein Hhal_1524 1652089 - 1652937 + | hypothetical protein TERM 716 1653241 - 1653206 - g 71 -2.4 -4.56597 | overlap 1653185 1653207 GTGCTCTGCGAAAAA GCGCTCGACATCAACC CAGA GCTGGAGATCGAGCGA TTCCCGAACGGGATT Hhal_1525 1652939 - 1653802 + | hypothetical protein Hhal_1526 1656123 - 1653853 - | RND efflux transporter Hhal_1527 1657604 - 1656120 - | hypothetical protein Hhal_1528 1658457 - 1657636 - | hypothetical protein Hhal_1529 1658810 - 1659736 + | hypothetical protein TERM 717 1659818 - 1659784 - T 90 -11.4 -4.38171 | opp_overlap 1659788, overlap 1659788 1659791 TATACGACACGAAAA GGCACAAGGAGGGGGA CTT TCCCCCTCCTTGTTTT TTGGTGCACCAGAAG TERM 718 1659788 - 1659814 + T 100 -21 -5.14563 | opp_overlap 1659784 1659788 1659791 CGACACGAAAAGGCA CAAGGAGGGGGA CTT TCCCCCTCCTTG TTTTTTGGTGCACCA TERM 719 1659814 - 1659788 - T 100 -21 -2.79239 | opp_overlap 1659788, overlap 1659784 1659791 CGACACGAAAAGGCA CAAGGAGGGGGA CTT TCCCCCTCCTTG TTTTTTGGTGCACCA TERM 720 1659811 - 1659791 - T 91 -16.9 -3.53184 | opp_overlap 1659788, overlap 1659788 1659784 CACGAAAAGGCACAA GGAGGGGGA CTT TCCCCCTCC TTGTTTTTTGGTGCA Hhal_1530 1662466 - 1659845 - | TPR repeat-containing protein TERM 721 1662522 - 1662481 - H 76 -14.3 -3.0806 | TCCAAAGCGCGAACA CCCCCAGGGCGGCGACGTG CGGC CACGCCGCCGCCCCCAGCA ACGGATTGCGGGGCC TERM 722 1662726 - 1662751 + H 83 -9.7 -4.41616 | opp_overlap 1662731 ATCGGCTCCGGGGCA CTCAACGACTG CGAT CGGACGTTGAG TTTCTTTACACCCAT TERM 723 1663175 - 1663165 - g 76 -2.4 -4.68645 | opp_overlap 1663171 TAGCGAAAACGAAAA CTGG GTC CCGG ATCGAGGGTCTTCGT Hhal_1531 1662953 - 1663984 + | hypothetical protein Hhal_1532 1664486 - 1665481 + | hypothetical protein TERM 724 1665544 - 1665569 + T 100 -20.5 -4.4078 | opp_overlap 1665529 CAGCGCGGCAGGCCT GAGGAGGGGGC AAAT GCCCCCTCCTC TTTTCCTTCCGGCAG Hhal_1533 1666979 - 1665630 - | two component, sigma54 specific, Fis family transcriptional regulator Hhal_1534 1669065 - 1666999 - | multi-sensor signal transduction histidine kinase Hhal_1535 1670491 - 1669082 - | sugar transferase TERM 725 1670496 - 1670486 - G 76 -2.4 -4.71382 | opp_overlap 1670491, overlap 1670487 1670488 ATAATGACCGAAAAA CCGC ACT GCGC GCCTCCAAGGGGGCG Hhal_1536 1671172 - 1670549 - | polysaccharide export protein Hhal_1537 1671337 - 1672356 + | UDP-glucose 4-epimerase Hhal_1538 1673903 - 1672416 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Hhal_1539 1675044 - 1673911 - | hypothetical protein Hhal_1540 1675939 - 1675025 - | HPr kinase Hhal_1541 1676283 - 1675936 - | hypothetical protein Hhal_1542 1676964 - 1676284 - | hypothetical protein TERM 726 1676881 - 1676901 + g 88 -14.7 -3.76839 | GAAGCGCCGGCGCGA CATCCCCCG GCT CGGGGGGTG TTTGCCTTGCCCTTC Hhal_1543 1677939 - 1677160 - | methyltransferase type 11 TERM 727 1677900 - 1677884 - G 82 -13.7 -3.72576 | CCCCGCTGTACGAAA CGGCGCT GCC AGCGCCG GGCGAAGTCCGAATC TERM 728 1678221 - 1678237 + G 75 -5.8 -4.41895 | CGGGACCAAGGCACC GCTAGC CTTCA GCTGGC TTTTGATTGCCGCTT Hhal_1544 1678198 - 1678908 + | hypothetical protein TERM 729 1679005 - 1679033 + TF 100 -20.3 -4.0162 | opp_overlap 1678998 GCAGTGAACTTCCCA CGACCGTGGCCAC GGA GCGGCCACGGTCG TTTATGGTATCGGCC Hhal_1546 1681399 - 1680008 - | hypothetical protein Hhal_1545 1679374 - 1680207 + | hypothetical protein Hhal_1547 1684859 - 1681464 - | VanZ family protein TERM 730 1682437 - 1682425 - G 72 -6.2 -4.30416 | overlap 1682427 ATGACCAATGCAAAA CCGG CACCT CCGG CCACCAGGAACGGAA TERM 731 1683291 - 1683269 - G 88 -12.7 -4.34402 | gap 1, overlap 1683285 CTGCGTAGATCAAAA GCCCGGC-GG CCAA CCAGCCGGGC CAGGCCGGCCAGGCC Hhal_1550 1686437 - 1687183 + | short-chain dehydrogenase/reductase SDR TERM 732 1688990 - 1688978 - g 73 -7.7 -4.15044 | CCGTCCGGGAACAAA TCCAG GCG CTGGA GAACCTTGCCGTGGT Hhal_1552 1688140 - 1689447 + | hypothetical protein Hhal_1553 1689452 - 1689883 + | hypothetical protein Hhal_1554 1690370 - 1689909 - | hypothetical protein Hhal_1555 1691439 - 1690348 - | membrane protein-like protein TERM 733 1690524 - 1690509 - G 72 -4.6 -4.43844 | overlap 1690510 GCAGGATGTAGAAAA GGGCAC GGGG GTGCCA GACCGGACGCAAGCC Hhal_1556 1692575 - 1691439 - | cellulose biosynthesis protein CelD TERM 734 1692395 - 1692347 - G 75 -8.8 -4.17762 | gap 2, overlap 1692344 1692359 GACTGCTGAAAACAA GGGCCCGACGAACCCTGGCCCTGC CGA GCGTGGCCAAGGCTC-TCGG-CTC GCCGCCCCACTGGTA Hhal_1557 1692743 - 1693711 + | polysaccharide deacetylase TERM 735 1695085 - 1695074 - g 76 -7.2 -4.36554 | CAGCACCACAACAAA CGCC GGTG GGCG AAGTCGGCTATCGTC Hhal_1558 1693726 - 1695144 + | O-antigen polymerase TERM 736 1695409 - 1695420 + G 76 -7.2 -4.28361 | TGGATCTTGACCATG CGGC GATC GCCG TTTTCCTCCGGTTGG TERM 737 1695586 - 1695600 + G 86 -6.4 -5.00616 | opp_overlap 1695586 GAGACGCGGCAATCA GGGAGT ACG ATTCCC TTTTTTCGGAGGCCA Hhal_1559 1695156 - 1696601 + | hypothetical protein Hhal_1560 1698008 - 1696806 - | hypothetical protein TERM 738 1697566 - 1697550 - G 73 -10.1 -3.87075 | opp_overlap 1697550 ACCATCCGGTACAAA CGCCCCA CGA TGGAGCG TTCCTATAACCGGCG TERM 739 1697846 - 1697832 - G 72 -3.4 -4.62302 | CAAGAGCTCGAAAAA CCGACG GGG CAACGG CTTCCGCTCCTGATA Hhal_1561 1699049 - 1698174 - | hypothetical protein Hhal_1562 1701004 - 1699187 - | ABC transporter related TERM 740 1699324 - 1699338 + g 78 -8.6 -4.36914 | TTGTCAGACGGTGGG CGATCA GGA TGATCG TTTTCTGGCCAGCCA TERM 741 1701440 - 1701467 + G 71 -2.6 -4.57341 | gap 1, overlap 1701441 GCCTCTCGTGCTCAT CGTGGGCACTGGA CGC TCCGG-GACCACC TTTTTAGGCAAGCTT Hhal_1563 1701411 - 1702379 + | sulfotransferase TERM 742 1702546 - 1702533 - f 79 -2.3 -5.03314 | overlap 1702505 1702534 GCCACTGGGAAAAAA CCCGC GACC ACGGA CTGCCCAGCTGTACG TERM 743 1702759 - 1702769 + F 70 -2.4 -4.68908 | CGGACTCCATCATAG CGCC GGA GGGG TTTCTTTTAAATAGG Hhal_1564 1703116 - 1704705 + | AMP-dependent synthetase and ligase Hhal_1565 1704702 - 1705937 + | Orn/DAP/Arg decarboxylase 2 Hhal_1566 1706104 - 1707105 + | glycosyl transferase family protein Hhal_1567 1707108 - 1708340 + | DegT/DnrJ/EryC1/StrS aminotransferase Hhal_1568 1708337 - 1709416 + | hypothetical protein Hhal_1569 1710617 - 1709379 - | hypothetical protein TERM 744 1709540 - 1709530 - G 70 -3.2 -4.4715 | GTGGAATTCACAAAA TCCG CCC CGAA GGTGCCCACATCCTT Hhal_1570 1711532 - 1710618 - | esterase/lipase/thioesterase family protein Hhal_1571 1712359 - 1711511 - | glycosyl transferase family protein TERM 745 1711979 - 1711965 - G 71 -2.7 -4.65895 | overlap 1711967 CCCCGCAGCGAAAAA GGCAG CCGTT CGGCC AAGTCAACCGCCAGC TERM 746 1712069 - 1712059 - G 70 -8.2 -3.90318 | overlap 1712060 CCATGACCTCAGAAA GGCC GTC GGCC AAGTCGTCGACCCAT TERM 747 1712294 - 1712284 - G 86 -6.8 -5.0065 | GAGGCAGAAACAAAA CCTC GAA GAGG GAGCCCTGGCGACCC Hhal_1572 1712591 - 1712337 - | hypothetical protein Hhal_1573 1712998 - 1714083 + | glycosyl transferase, group 1 TERM 748 1714649 - 1714607 - gT 70 -4.7 -4.37092 | gap 1, overlap 1714620 AGCCCGCTGACAAAA CTCGGAGCAACCA-GCTGCG CCTG CGCAGCTTCGACGAACCGAG CGCCCTCAAACGCTT TERM 749 1715588 - 1715628 + GT 77 -12.5 -3.64371 | gap 1, overlap 1715592 1715608 TCTCAGCATCGGATG GCAAGGGCGCCGATCCGG ATGCCG CCGGGGCAGCGCCC-TGC TTTGGCATCTCGCTT TERM 750 1715592 - 1715625 + GT 71 -13 -2.93585 | overlap 1715588 1715608 AGCATCGGATGGCAA GGGCGCCGATCCGG ATGCCG CCGGGGCAGCGCCC TGCTTTGGCATCTCG Hhal_1575 1716775 - 1715987 - | type II secretion system protein N Hhal_1574 1714117 - 1716204 + | protein tyrosine phosphatase Hhal_1576 1717381 - 1716842 - | hypothetical protein Hhal_1577 1718668 - 1717469 - | sigma-54 dependent trancsriptional regulator TERM 751 1718427 - 1718393 - G 72 -13.4 -3.14931 | GTCACCGGTCACCAA GCCCAGCCGGCGTGGC CCC GCATCGCCAGATGGGC TCCGCCCCCGGCCCA TERM 752 1718833 - 1718785 - R 93 -14.3 -4.08767 | GGCAGCCCGGTAAAA CCCCAGCGGGACCCGGAGGCGCG GGA CGGAACCCCGTGGACCGCTGGGG TTAAACAGCTATGGT TERM 753 1719008 - 1718993 - R 77 -11.8 -3.68073 | CACTGGACTCAATAA CCGGCG TCCT CGCCGG CATCCTCAGCATCCT Hhal_1578 1719177 - 1718986 - | hypothetical protein Hhal_1579 1719462 - 1720436 + | diguanylate cyclase with PAS/PAC sensor Hhal_1580 1720635 - 1721519 + | hypothetical protein Hhal_1581 1721770 - 1721570 - | hypothetical protein TERM 754 1721837 - 1721799 - R 100 -13.1 -5.46698 | gap 1 CCTAAAACGAAAAAA CCCCCG-TCGGCGGACAC TGAC GTGCACGCTGAGCGGGGG CTCGGCTCGAATTTG TERM 755 1722066 - 1722023 - R 93 -18 -3.41602 | overlap 1722027 GCGATCCGACCAGAA TGGAGCCGCTGGGGCGGGGG GGAA CCCCCGCCCCAGCCGAGGCA CCAAGGTCAGACGCT TERM 756 1722062 - 1722027 - R 100 -21.8 -2.61548 | overlap 1722023 TCCGACCAGAATGGA GCCGCTGGGGCGGGGG GGAA CCCCCGCCCCAGCCGA GGCACCAAGGTCAGA Hhal_1582 1723488 - 1722073 - | glutamine synthetase, type I Hhal_1583 1724039 - 1723707 - | hypothetical protein Hhal_1584 1724327 - 1724052 - | histone family protein DNA-binding protein Hhal_1585 1724857 - 1724408 - | ribonuclease H Hhal_1586 1725585 - 1724854 - | methyltransferase type 11 Hhal_1587 1725723 - 1726490 + | hydroxyacylglutathione hydrolase Hhal_1588 1726552 - 1728204 + | lytic transglycosylase, catalytic TERM 757 1728300 - 1728273 - T 76 -9.8 -4.07687 | gap 1, opp_overlap 1728272 1728273, overlap 1728274 AGGCTTCGGGCAAAA CGGCGCAGCCGCC GTC AGCG-CTGCGCCC CTTCCTCCTCACGCT TERM 758 1728299 - 1728274 - T 72 -13.3 -3.04398 | gap 1, opp_overlap 1728273 1728272, overlap 1728273 GGCTTCGGGCAAAAC GGCGCAGCCGCC GTC AGCG-CTGCGCC CCTTCCTCCTCACGC Hhal_1589 1728568 - 1728287 - | cell division topological specificity factor MinE Hhal_1590 1729386 - 1728577 - | septum site-determining protein MinD Hhal_1591 1730149 - 1729406 - | septum site-determining protein MinC Hhal_1592 1732063 - 1730162 - | heat shock protein 90 TERM 759 1731688 - 1731677 - G 71 -2.2 -4.6635 | overlap 1731666 AAAGGCCGAATAAAA TCCG ACAC CGAA CTGGCCGATCAGCTG TERM 760 1732101 - 1732126 + r 86 -14.7 -3.48395 | gap 1 CGTTGAACACGTGGG CTCGCTCGCCGG ATC CCGGCG-GCGGG TTGTGTCGACCGGAT Hhal_1593 1732670 - 1732191 - | methylated-DNA--protein-cysteine methyltransferase Hhal_1594 1734579 - 1732693 - | acetolactate synthase, large subunit, biosynthetic type Hhal_1595 1735167 - 1734763 - | methionine-R-sulfoxide reductase TERM 761 1734871 - 1734852 - G 71 -2.1 -4.57073 | gap 1, overlap 1734853 1734854 GACCGTCCGCAAAAA CG-TGCCC CAGGT GGGCATCA CAGGTCGCACAGAGC TERM 762 1735047 - 1735026 - G 90 -15.9 -3.73775 | overlap 1735040 CCGAGTTGCAGCAAA CGCAGCGGT ACAC ACCGCTGCG ATCACAGTGGTAGTA Hhal_1596 1735332 - 1737371 + | peptidase S15 Hhal_1597 1738137 - 1737403 - | silent information regulator protein Sir2 Hhal_1598 1738276 - 1739502 + | phosphoserine phosphatase SerB Hhal_1599 1739600 - 1740703 + | surface antigen (D15) Hhal_1600 1740780 - 1741697 + | bacteriochlorophyll/chlorophyll a synthase TERM 763 1742043 - 1742074 + G 77 -14.5 -3.15861 | gap 1 TCGCGTTTCTCATGA T-CGGTGCCGGCGT CAGCA GCGCCGGCACCGCA TTGCTGGCGCTCCTC Hhal_1601 1741694 - 1743037 + | PUCC protein Hhal_1602 1743037 - 1744254 + | geranylgeranyl reductase TERM 764 1744409 - 1744426 + T 93 -14.1 -4.07885 | opp_overlap 1744409 AAACGCACAAAAAAA CGGCGCC CGGA GGCGCCG TTTTAAAGGACGGTA TERM 765 1744426 - 1744409 - T 100 -14.1 -5.68039 | opp_overlap 1744409 AAACGCACAAAAAAA CGGCGCC CGGA GGCGCCG TTTTAAAGGACGGTA TERM 766 1744443 - 1744465 + T 82 -16.2 -3.07935 | opp_overlap 1744434 TTTAAAGGACGGTAC CCGGAGGCCG AAA CGGCCACCGG TTCGATCCCTGCGCT Hhal_1603 1745568 - 1744480 - | photosynthetic reaction center subunit cytochrome c TERM 767 1745401 - 1745436 + g 82 -17.6 -3.06183 | overlap 1745403 1745412 CTCCGGCGCCAGGTG GAGGTCATCGTCCCGC AGCC GCGGGTTGGTGACCTC TTCCATGCCGGTGCC Hhal_1604 1746539 - 1745568 - | photosynthetic reaction center subunit M Hhal_1605 1747376 - 1746546 - | photosynthetic reaction center subunit L TERM 768 1747316 - 1747347 + g 75 -5.1 -4.52949 | gap 1, opp_overlap 1747315, overlap 1747316 AAAAGTCAAACAAGT CC-CCTCCGAGGAG TGTAC CTCCTCGGACACGG TATTTTTTTTCAAAG Hhal_1606 1747702 - 1747499 - | antenna complex, alpha/beta subunit Hhal_1607 1747939 - 1747715 - | antenna complex, alpha/beta subunit TERM 769 1747966 - 1747995 + r 89 -18.5 -3.14463 | CCGTTCGACTTTTCG CCTGCGCCGCGCG CCCC CGCGCGGCTCGGG TTGGTCACCACGCTT TERM 770 1748001 - 1748017 + r 81 -8 -4.56597 | overlap 1748000 1748016 GCGGCTCGGGTTGGT CACCAC GCTTG GTGGTG TTTTTCCCGACCGAG Hhal_1608 1749980 - 1748451 - | chlorophyllide reductase subunit Z TERM 771 1748690 - 1748710 + g 75 -5.4 -4.614 | gap 1, overlap 1748688 1748687 GGACGGCTCGCGAGT CGGCTGCGA CATT TTGC-GCCG TTTTCTCTGCTTGCG TERM 772 1749156 - 1749142 - G 71 -2.8 -4.56597 | overlap 1749144 GCCGTGGCGTAAAAA TCCTGC GTG ACAGAA CGCCACAAATCCCAA Hhal_1609 1751347 - 1749980 - | chlorophyllide reductase subunit Y Hhal_1610 1752296 - 1751370 - | chlorophyllide reductase iron protein subunit X Hhal_1611 1753279 - 1752296 - | chlorophyll synthesis pathway, BchC Hhal_1612 1754468 - 1753323 - | O-methyltransferase family protein Hhal_1613 1755340 - 1754465 - | polyprenyl synthetase Hhal_1614 1755425 - 1756987 + | phytoene dehydrogenase-related protein Hhal_1615 1757035 - 1757862 + | hydroxyneurosporene synthase TERM 773 1757905 - 1757875 - T 100 -20.4 -3.02144 | opp_overlap 1757870 1757869 TGACCCCGGTGAACA CCGCCACGGGCGGC ACT GCCGCCTGTGGCGA TCTAGCGTTCGTCGT Hhal_1616 1759548 - 1758082 - | glutamate synthases, NADH/NADPH, small subunit Hhal_1617 1764202 - 1759541 - | glutamate synthase (ferredoxin) TERM 774 1763938 - 1763918 - G 72 -3.9 -4.58395 | GTCACGGCTGAAAAA GACCATGGC CAC GCCGTAATC GCCCGCCGCCGGCAA TERM 775 1764311 - 1764321 + r 72 -8.2 -4.09739 | ACGATTATGGATTGT CGGG CGG CCCG TTTTAGCGGACTTGG Hhal_1618 1765652 - 1764558 - | squalene/phytoene synthase Hhal_1619 1767159 - 1765633 - | phytoene dehydrogenase-related protein TERM 776 1765717 - 1765689 - G 76 -8.1 -4.30719 | gap 1, overlap 1765692 TCTTGGCAGAAGAAA CCACTCCGG-GC AGACCG GCACCGGGGTGG GTACCGGCGCCGACC TERM 777 1767239 - 1767199 - R 100 -23.4 -3.36289 | gap 1, opp_overlap 1767225, overlap 1767201 GACTATGTCAACGAA TATCCGCGCCACCGCGACC TTTT GG-CGCGGTGGCGCGGATG GCGGCCAGGACCTGC TERM 778 1767237 - 1767201 - R 100 -26 -3.24825 | gap 1, opp_overlap 1767225, overlap 1767199 CTATGTCAACGAATA TCCGCGCCACCGCGACC TTTT GG-CGCGGTGGCGCGGA TGGCGGCCAGGACCT Hhal_1620 1768102 - 1767191 - | alpha/beta hydrolase fold TERM 779 1767795 - 1767751 - G 82 -17.2 -3.02144 | gap 2, overlap 1767711 1767768 CCATGCGGGCCAACA GGGCCGCACCCACCGAATGGCC AAT GGCCACCCGG-GG-CGCGACCC CCAGTGCGTCCAGAA bchD 1769995 - 1768118 - | magnesium chelatase subunit D TERM 780 1769696 - 1769686 - G 75 -8.2 -4.11216 | overlap 1769687 CGGCCATGGCCAAAA CGGC CAC GCCG CCATCGACCTCGGCC Hhal_1622 1771017 - 1769992 - | magnesium chelatase ATPase subunit I Hhal_1623 1771641 - 1771114 - | isopentenyl-diphosphate delta-isomerase, type 1 Hhal_1624 1771856 - 1772293 + | high potential iron-sulfur protein TERM 781 1772358 - 1772395 + F 89 -15 -3.73783 | gap 3, opp_overlap 1772360 GGTTGCTGCGCCAGA GAC--CGCCGGGCTGCCTG GTA CAGGC-GCCCGGCGACGTC TTATTGGCTTGACTG TERM 782 1772391 - 1772360 - f 100 -20.2 -2.87132 | gap 1, opp_overlap 1772358 TTGCTGCGCCAGAGA CCGCCGGGCTGCCTG GTA CAGGC-GCCCGGCGA CGTCTTATTGGCTTG Hhal_1625 1772538 - 1774214 + | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase TERM 783 1774358 - 1774319 - g 87 -17.8 -3.36273 | opp_overlap 1774317 1774323 GCCCTGGAAGACGAA GAGACAGCCCGGCGGTGC TTCG ACGCTGCCGGGCTGTCCC GGTGGTTCGAGCACC Hhal_1626 1774235 - 1774834 + | bacteriochlorophyll 4-vinyl reductase Hhal_1627 1776503 - 1774923 - | dienelactone hydrolase Hhal_1628 1777334 - 1776519 - | hypothetical protein Hhal_1629 1777819 - 1777334 - | hypothetical protein TERM 784 1777850 - 1777877 + r 78 -14 -3.21099 | overlap 1777864 CCGGCATAGGTCAAC GCCGCCACGCTC AGGA GTGCGCGGCGGC TTCCTGATCAACCCC Hhal_1630 1778498 - 1777860 - | hypothetical protein Hhal_1631 1779331 - 1778495 - | photosynthetic reaction center subunit H Hhal_1632 1780881 - 1779454 - | PUCC protein Hhal_1633 1781582 - 1780878 - | Mg-protoporphyrin IX methyl transferase chlL 1782487 - 1781582 - | protochlorophyllide reductase iron-sulfur ATP-binding protein bchH 1786233 - 1782484 - | magnesium chelatase subunit H TERM 785 1785612 - 1785587 - GR 95 -18.3 -3.57144 | TCCTGCACCTCCAAA GAGCCGCGCAG GCCG CTGCGCGGCCC TGCTGCGTAACGGTT Hhal_1636 1787788 - 1786208 - | light-independent protochlorophyllide reductase subunit B Hhal_1637 1789066 - 1787792 - | light-independent protochlorophyllide reductase subunit N Hhal_1638 1789575 - 1789063 - | 2-vinyl bacteriochlorophyllide hydratase TERM 786 1789185 - 1789138 - G 95 -15 -3.96624 | gap 1, opp_overlap 1789139 CAGCTTGAGGAGAAA CTGCATCGCGTTGACCACGTAGG CGG CATAGGCGGCCAACGCGATG-AG CATCTGCTGCACCGG Hhal_1639 1789864 - 1790496 + | Fis family transcriptional regulator Hhal_1640 1790579 - 1791838 + | coenzyme F420 hydrogenase/dehydrogenase beta subunit Hhal_1641 1792273 - 1791821 - | hypothetical protein Hhal_1642 1793680 - 1792316 - | tryptophan synthase subunit beta Hhal_1643 1793861 - 1795762 + | PAS/PAC sensor hybrid histidine kinase Hhal_1644 1796362 - 1795799 - | Lipocalin family protein TERM 787 1797545 - 1797506 - gR 95 -18.6 -3.66018 | opp_overlap 1797497 CTACTACGCCAAGAA GGCCCAGGGGTCGGCGAT CACC ACCGCCGACCCCCAAACC GTCTGGCCGGTTGTC Hhal_1646 1798861 - 1797896 - | hypothetical protein Hhal_1645 1796484 - 1797998 + | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 788 1799054 - 1799037 - g 74 -12.7 -3.61517 | ACGGTGGTCGAACAA GGCGGCT TCAC AGCCGCC GGCGAGCAGCTCCAC Hhal_1647 1798977 - 1799846 + | LysR family transcriptional regulator TERM 789 1800256 - 1800242 - g 71 -11.4 -3.54307 | overlap 1800231 AAGATCGGCGGCAAA CTCCGC GCC GCGGAG TTCGAGTTCCAGCGT Hhal_1648 1800017 - 1800577 + | hypothetical protein Hhal_1649 1802588 - 1800660 - | ABC transporter related Hhal_1650 1802652 - 1803527 + | hypothetical protein TERM 790 1803559 - 1803541 - T 100 -17.4 -5.38047 | opp_overlap 1803541 GACGCACACAAAAAA GCCCGGCC TTA GGCCGGGC TTTCGAGTCTGGCGC TERM 791 1803541 - 1803559 + T 93 -17.4 -3.63627 | opp_overlap 1803541 GACGCACACAAAAAA GCCCGGCC TTA GGCCGGGC TTTCGAGTCTGGCGC TERM 792 1803642 - 1803655 + T 85 -8.1 -4.69559 | CCAGTTGAGCTACCG GCGCT ATAA AGCGC TTTATTTTGCCGTTT Hhal_1651 1804052 - 1803837 - | carbon storage regulator, CsrA Hhal_1652 1805428 - 1804178 - | aspartate kinase Hhal_1653 1808091 - 1805500 - | alanyl-tRNA synthetase recX 1808581 - 1808096 - | recombination regulator RecX TERM 793 1808571 - 1808532 - G 78 -10.1 -4.15044 | gap 2, overlap 1808533 1808536 CGCCGGGCCAACAAA CGCAGGGCGGCATCACG TACCGCCT CG-GATGCCGCCCCG-G CCTCGCTCATGACCC Hhal_1655 1809642 - 1808578 - | recA protein TERM 794 1809610 - 1809622 + g 86 -10.5 -4.63527 | GATCTGTCCCAACGC GGCGC CAA GCGCC TTTTTGCGATCGTCG Hhal_1656 1810320 - 1809823 - | CinA domain-containing protein Hhal_1657 1810359 - 1812965 + | DNA mismatch repair protein Hhal_1658 1813070 - 1813393 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Hhal_1659 1814172 - 1813408 - | tyrosine recombinase XerD TERM 795 1814159 - 1814141 - G 78 -16 -3.08992 | AGGTAGGCGAAGACA TCGCCGCG ACC CGCGGCGA CAAGCCCGTCCACGC Hhal_1660 1815185 - 1814373 - | Fis family transcriptional regulator TERM 796 1815408 - 1815448 + G 74 -14.8 -3.08679 | gap 2, overlap 1815412 CGCTTACGTGGTCTT CCACGCTCCGGCCGGCGACG CGC CGTTGCCG-CCGCAGC-TGG TCTTCGCTCGAGCCG TERM 797 1815412 - 1815445 + G 70 -15.3 -2.75992 | gap 1, overlap 1815408 TACGTGGTCTTCCAC GCTCCGGCCGGCGACG CGC CGTTGCCG-CCGCAGC TGGTCTTCGCTCGAG Hhal_1661 1815271 - 1816290 + | putative RNA 2'-O-ribose methyltransferase Hhal_1662 1816374 - 1816790 + | Fe-S metabolism associated SufE Hhal_1663 1816851 - 1817024 + | hypothetical protein Hhal_1664 1817043 - 1818068 + | alpha/beta hydrolase fold Hhal_1665 1818332 - 1819717 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Hhal_1666 1819741 - 1820118 + | hypothetical protein TERM 798 1820201 - 1820170 - T 90 -15.8 -3.64703 | opp_overlap 1820172, overlap 1820171 1820174 CGCCGCTGACCGAAA CGCAGAGGCCGCCC CGCA GGGCGGCCTCTGTT TTACTGGGCGTGGCG TERM 799 1820200 - 1820171 - T 93 -19.3 -2.78679 | opp_overlap 1820172, overlap 1820170 1820174 GCCGCTGACCGAAAC GCAGAGGCCGCCC CGCA GGGCGGCCTCTGT TTTACTGGGCGTGGC TERM 800 1820172 - 1820199 + T 100 -22.8 -4.26076 | opp_overlap 1820171 1820170 1820174 CCGCTGACCGAAACG CAGAGGCCGCCC CGCA GGGCGGCCTCTG TTTTACTGGGCGTGG TERM 801 1820197 - 1820174 - T 90 -19.6 -2.66272 | opp_overlap 1820172, overlap 1820171 1820170 GCTGACCGAAACGCA GAGGCCGCCC CGCA GGGCGGCCTC TGTTTTACTGGGCGT Hhal_1667 1820671 - 1820225 - | hypothetical protein Hhal_1668 1820762 - 1821655 + | apurinic endonuclease Apn1 Hhal_1669 1821675 - 1822733 + | FAD dependent oxidoreductase Hhal_1670 1822730 - 1823335 + | putative rRNA methylase Hhal_1671 1823323 - 1823994 + | short-chain dehydrogenase/reductase SDR Hhal_1672 1824295 - 1823969 - | XRE family plasmid maintenance system antidote protein Hhal_1673 1824435 - 1826213 + | phosphoenolpyruvate carboxykinase TERM 802 1826296 - 1826240 - T 100 -30.6 -2.61264 | opp_overlap 1826254, overlap 1826254 GTCCGCACCTAGAAG TGCTCATCAAAA-AACCCCCGGTGGGGC CAC GCCCCACCGGGGGTTGTCTTGATG-GCA AACGCGGAACGCGCG TERM 803 1826254 - 1826282 + T 100 -27.5 -3.71284 | opp_overlap 1826240 1826254 GTGCTCATCAAAAAA CCCCCGGTGGGGC CAC GCCCCACCGGGGG TTGTCTTGATGGCAA TERM 804 1826282 - 1826254 - T 100 -27.5 -5.14563 | opp_overlap 1826254, overlap 1826240 GTGCTCATCAAAAAA CCCCCGGTGGGGC CAC GCCCCACCGGGGG TTGTCTTGATGGCAA Hhal_1674 1827249 - 1826335 - | 5,10-methylenetetrahydrofolate reductase TERM 805 1827381 - 1827353 - R 100 -19.5 -3.75153 | opp_overlap 1827354, overlap 1827354 GGCGCTCAACCGAAA CCCCGGAGGCCGC TGC GCGGCCCCCGGGT CTGTCGGTCAAGCCG TERM 806 1827380 - 1827354 - R 100 -23 -2.84878 | opp_overlap 1827354, overlap 1827353 GCGCTCAACCGAAAC CCCGGAGGCCGC TGC GCGGCCCCCGGG TCTGTCGGTCAAGCC TERM 807 1827354 - 1827380 + r 100 -20.8 -2.91264 | opp_overlap 1827354 1827353 GCGCTCAACCGAAAC CCCGGAGGCCGC TGC GCGGCCCCCGGG TCTGTCGGTCAAGCC Hhal_1675 1828704 - 1827412 - | S-adenosyl-L-homocysteine hydrolase Hhal_1676 1829899 - 1828733 - | methionine adenosyltransferase Hhal_1677 1830833 - 1829997 - | methyltransferase type 11 Hhal_1678 1831644 - 1830838 - | methyltransferase type 12 Hhal_1679 1833764 - 1831992 - | DNA polymerase III alpha subunit-like protein TERM 808 1833738 - 1833695 - G 78 -13.6 -3.59979 | opp_overlap 1833737, overlap 1833696 1833735 CGGCGGCATCCCAAA GCCGATCCCAGGCGGCGCGC TCCA GCGCGCCCCCACGGAACGGA ACGATGGTCGTGGCG TERM 809 1833737 - 1833696 - G 78 -17.1 -2.75844 | overlap 1833695 1833735 GGCGGCATCCCAAAG CCGATCCCAGGCGGCGCGC TCCA GCGCGCCCCCACGGAACGG AACGATGGTCGTGGC Hhal_1680 1834240 - 1833812 - | CMP/dCMP deaminase, zinc-binding guaA 1835856 - 1834267 - | bifunctional GMP synthase/glutamine amidotransferase protein Hhal_1682 1837420 - 1835876 - | inosine-5'-monophosphate dehydrogenase Hhal_1683 1837493 - 1838869 + | exodeoxyribonuclease VII, large subunit TERM 810 1839138 - 1839152 + G 71 -11.4 -3.59979 | ACCCTGAAGGTCGAC GGCGAG CCC CTCGCC TTTGAGGTCCAGCCC Hhal_1684 1838859 - 1839692 + | peptidase M23B Hhal_1685 1839722 - 1840906 + | acetyl-CoA acetyltransferases Hhal_1686 1841967 - 1841014 - | glutathione S-transferase domain-containing protein TERM 811 1842044 - 1842015 - R 100 -21.5 -5.63517 | GGCCCAAACAAAAAA GGCGGAGTGACCG CACC CGGTCACCCCGCC CGCTCCGTCCGGGGA Hhal_1687 1842654 - 1842073 - | hypothetical protein Hhal_1688 1843348 - 1842764 - | hypothetical protein Hhal_1689 1843619 - 1844365 + | glutaredoxin family protein TERM 812 1844387 - 1844415 + T 100 -24.6 -4.52589 | opp_overlap 1844387 CCGTTGCAGGAAAAA GCCCCCGGGGCG GCCAG CGCCCCGGGGGC TTTTCTATGCCGGCC TERM 813 1844415 - 1844387 - T 100 -24.6 -4.72272 | opp_overlap 1844387 CCGTTGCAGGAAAAA GCCCCCGGGGCG GCCAG CGCCCCGGGGGC TTTTCTATGCCGGCC Hhal_1690 1845140 - 1844445 - | hypothetical protein Hhal_1691 1846781 - 1845222 - | hypothetical protein Hhal_1692 1848102 - 1846822 - | hypothetical protein Hhal_1693 1850073 - 1848127 - | putative serine protein kinase, PrkA TERM 814 1848418 - 1848436 + g 72 -5.9 -4.29325 | GCGGAAGTCCTTGGG GTTGGCG ATACC CGCCGGC TTTTCGATCTTCGTC TERM 815 1849098 - 1849111 + g 73 -8.1 -4.15654 | overlap 1849092 1849099 TCACCGAGATGCGGT CGAGG AACG CCTCG TTATTCTTGTTGTTC Hhal_1694 1851255 - 1850260 - | cysteine synthase A secF 1852342 - 1851380 - | preprotein translocase subunit SecF secD 1854201 - 1852345 - | preprotein translocase subunit SecD Hhal_1697 1854549 - 1854205 - | preprotein translocase, YajC subunit Hhal_1698 1854938 - 1854567 - | preprotein translocase, YajC subunit Hhal_1699 1856164 - 1855016 - | queuine tRNA-ribosyltransferase Hhal_1700 1856949 - 1856236 - | carbonic anhydrase Hhal_1701 1857626 - 1856967 - | MOSC domain-containing protein Hhal_1702 1858495 - 1857623 - | hypothetical protein Hhal_1703 1859335 - 1858514 - | redoxin domain-containing protein TERM 816 1858624 - 1858607 - G 81 -2.5 -5.00895 | overlap 1858608 CTCATCATAGAAAAA GGTGGCC GGAA GGCCGCG GGTACCGGTGGCGTC Hhal_1704 1859922 - 1859332 - | ChaC family protein Hhal_1705 1862041 - 1859981 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 817 1862070 - 1862051 - R 86 -10 -4.2828 | overlap 1862067 CGGCATGCAGCAAAA CGCCCTTG AGGG CAAAGGCG CCCGCAGCCGCCAGC Hhal_1706 1862856 - 1862125 - | hypothetical protein TERM 818 1862981 - 1863031 + r 100 -48.6 -3.50853 | ACCCGGCCGCCGTAG GGCGGTCCCGCGCAAGGGGCGCTG TTC CAGCGCCCCTTGCGCGGGACCGCC TTCTCGTTGGAGAAG Hhal_1707 1865607 - 1863181 - | DEAD/DEAH box helicase domain-containing protein TERM 819 1863416 - 1863393 - G 86 -12.4 -4.18018 | opp_overlap 1863406 CGCGCTGATCGAAAA GCGGTGCCGA GAGC CCGACACCGC CCGGGTAGTTGTCGT Hhal_1708 1867760 - 1865673 - | UvrD/REP helicase Hhal_1709 1868345 - 1867764 - | hypothetical protein TERM 820 1868441 - 1868488 + H 80 -16.8 -2.52464 | opp_overlap 1868439 GTTTCGGCAAGGAGG CGGGCGTTGGGCGGGGCGGTCG TCCT TGACCACCCCGCCCCTTGCCCC TACATTCGGGAAGGA Hhal_1710 1868735 - 1870006 + | metallophosphoesterase TERM 821 1870405 - 1870434 + G 80 -16.4 -3.12351 | GCCGGCGGCTACGAT CTGGCCGCGCTG ACCGCC CAGCGCGGCCCG TTCCATATCAAGCGC Hhal_1711 1870003 - 1873545 + | hypothetical protein Hhal_1712 1873548 - 1874057 + | protein of unknown function DUF335, SprT Hhal_1713 1875116 - 1874079 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Hhal_1714 1877134 - 1875113 - | methyl-accepting chemotaxis sensory transducer Hhal_1715 1879681 - 1877432 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Hhal_1716 1882360 - 1879790 - | MCP methyltransferase, CheR-type TERM 822 1880536 - 1880522 - G 71 -11.4 -3.59979 | GCGGCGGACTTCAAA CCGGAG CCA CTCCGG ATCGGCATCATCGTC TERM 823 1884838 - 1884807 - g 78 -15.8 -3.02511 | TGCAGTTCGCCAAGA GCCAGCGTCGCCGC GGCG ACGGCGACGCCGGA GACACCCCGGACACC Hhal_1717 1882469 - 1884874 + | peptidase S16, lon domain-containing protein Hhal_1718 1884867 - 1885712 + | UspA domain-containing protein Hhal_1719 1886497 - 1885709 - | hypothetical protein Hhal_1720 1887549 - 1886494 - | hypothetical protein Hhal_1721 1888644 - 1887568 - | hypothetical protein Hhal_1722 1890140 - 1888752 - | magnesium transporter Hhal_1723 1890544 - 1890125 - | hypothetical protein TERM 824 1890226 - 1890257 + g 79 -15.2 -3.29325 | gap 1, opp_overlap 1890199, overlap 1890224 1890228 GTAGGATGCGCCCTT GCTCGACCTGCGCCC AGT GGGC-CAGGTCGATC TGTTGCTTGTCGGAG TERM 825 1890228 - 1890255 + g 80 -16.4 -3.21064 | gap 1, opp_overlap 1890199, overlap 1890226 1890224 AGGATGCGCCCTTGC TCGACCTGCGCCC AGT GGGC-CAGGTCGA TCTGTTGCTTGTCGG TERM 826 1890587 - 1890606 + r 93 -13.6 -4.17048 | opp_overlap 1890587 ATCACCCTGGTAGAA GCGGAACC CGCA GGTTCCGC TTGTTTTAAAAAGAC TERM 827 1890606 - 1890587 - R 78 -13.6 -3.2963 | opp_overlap 1890587 ATCACCCTGGTAGAA GCGGAACC CGCA GGTTCCGC TTGTTTTAAAAAGAC TERM 828 1890632 - 1890657 + r 71 -11.9 -3.23216 | opp_overlap 1890630 AAGACCGAACTCACT GCTTTTCCAGG CTTG CCAGGAAAAGC TTCATCCTGGTCCAC TERM 829 1890721 - 1890689 - R 100 -23.7 -3.55444 | overlap 1890657 GCGTCAGCGGTGAAA GCAGGCTGCTGAAAA GGG TTTTCAGCAGCCTGC TAGTAGGCGTACTCC Hhal_1724 1892088 - 1890721 - | glutamate--cysteine ligase Hhal_1725 1893653 - 1892127 - | hypothetical protein Hhal_1726 1893734 - 1894162 + | phosphoribosyl-AMP cyclohydrolase Hhal_1727 1894970 - 1894167 - | ABC-3 protein Hhal_1728 1895739 - 1894957 - | ABC transporter related Hhal_1729 1896212 - 1895718 - | ferric uptake regulator family protein Hhal_1730 1896289 - 1897230 + | periplasmic solute binding protein Hhal_1731 1897889 - 1897227 - | peptidase M22, glycoprotease TERM 830 1897862 - 1897828 - G 91 -20.1 -3.29263 | overlap 1897830 ACATCGCCGTCACAA TAGACGGCCACCGAG CACCC CTCGGTGGCCGTCTC CAGGGCCACGATCAC TERM 831 1897860 - 1897830 - G 100 -22.7 -3.21395 | overlap 1897828 ATCGCCGTCACAATA GACGGCCACCGAG CACCC CTCGGTGGCCGTC TCCAGGGCCACGATC Hhal_1732 1898090 - 1898581 + | L-2,4-diaminobutyric acid acetyltransferase Hhal_1733 1898647 - 1899930 + | diaminobutyrate--2-oxoglutarate aminotransferase ectC 1900052 - 1900432 + | L-ectoine synthase Hhal_1735 1902072 - 1900414 - | putative ABC transporter Hhal_1736 1903742 - 1902072 - | putative ABC transporter Hhal_1737 1905540 - 1903828 - | endonuclease/exonuclease/phosphatase Hhal_1738 1908676 - 1905560 - | acriflavin resistance protein Hhal_1739 1909773 - 1908673 - | RND family efflux transporter MFP subunit TERM 832 1909791 - 1909808 + r 72 -12.7 -3.06696 | TGACTCCTGGCCGGG GCCGTGG ATGG CCACGGC TATATTAGCCGCCCC Hhal_1740 1912034 - 1909824 - | metal dependent phosphohydrolase Hhal_1741 1912204 - 1912884 + | SOS-response transcriptional repressor, LexA Hhal_1742 1912897 - 1913733 + | hypothetical protein Hhal_1743 1913771 - 1915069 + | hypothetical protein Hhal_1744 1915725 - 1915075 - | nicotinamidase Hhal_1745 1917932 - 1915824 - | polynucleotide phosphorylase/polyadenylase Hhal_1746 1918221 - 1917952 - | ribosomal protein S15 Hhal_1747 1919262 - 1918348 - | tRNA pseudouridine synthase B Hhal_1748 1919650 - 1919270 - | ribosome-binding factor A Hhal_1749 1922330 - 1919658 - | translation initiation factor IF-2 nusA 1923890 - 1922385 - | transcription elongation factor NusA Hhal_1751 1924383 - 1923928 - | hypothetical protein TERM 833 1924419 - 1924403 - R 100 -13.7 -5.40464 | CACCACAAACAAAAA GAGGGCC CAA GGCCCTC CCCCGAGTCCGCCCG TERM 834 1924602 - 1924586 - R 100 -15.1 -5.24129 | opp_overlap 1924586 GGCGCGCATAAAAAA GGCGGCC AGC GGCCGCC TTCTCGGTGTTGGTA TERM 835 1924586 - 1924602 + r 86 -15.1 -3.43217 | opp_overlap 1924586 GGCGCGCATAAAAAA GGCGGCC AGC GGCCGCC TTCTCGGTGTTGGTA Hhal_1752 1926216 - 1924762 - | proton-translocating NADH-quinone oxidoreductase, chain N Hhal_1753 1927747 - 1926230 - | proton-translocating NADH-quinone oxidoreductase, chain M Hhal_1754 1929763 - 1927793 - | proton-translocating NADH-quinone oxidoreductase, chain L TERM 836 1928569 - 1928556 - G 72 -5.9 -4.30719 | overlap 1928564 TCCTTGGAGAAGAAA CCGGA GAAG CCCGG GATGCCGATCAGCGC Hhal_1755 1930072 - 1929767 - | NADH-ubiquinone oxidoreductase, chain 4L Hhal_1756 1930732 - 1930121 - | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 Hhal_1757 1931240 - 1930749 - | NADH dehydrogenase subunit I Hhal_1758 1932267 - 1931254 - | respiratory-chain NADH dehydrogenase, subunit 1 TERM 837 1931581 - 1931569 - G 76 -2.6 -4.72272 | CTCGGCCAGGAAAAA GACC GCAAA GGCC ATCCCCGAGTACTCC Hhal_1759 1934688 - 1932301 - | NADH dehydrogenase subunit G TERM 838 1932760 - 1932744 - G 73 -7.9 -4.11216 | overlap 1932745 GCTCCAGCCCCAAAA CCGTGCC CAG GGCACGC AGGATTCGCCAGCCG Hhal_1760 1935965 - 1934685 - | NADH-quinone oxidoreductase, F subunit TERM 839 1935312 - 1935333 + g 78 -12.3 -3.75738 | opp_overlap 1935285 GCGGATCACCGCCGG CACCGAGGC AAGG GTCTCGGTG TTGTTGATCGTCGTC Hhal_1761 1936499 - 1935987 - | NADH-quinone oxidoreductase, E subunit Hhal_1762 1937749 - 1936496 - | NADH dehydrogenase subunit D TERM 840 1936965 - 1936979 + g 72 -3.5 -4.57569 | TCGACCCGGTCGTAG GCAGC GTAGG GTTGC TTTTTGCGCAGGTCC Hhal_1763 1938482 - 1937742 - | NADH (or F420H2) dehydrogenase, subunit C TERM 841 1937849 - 1937867 + g 81 -7.4 -4.60487 | GCTCGATCTCCACCG GGCCGT AGACCAC ACGGCC TTTTTCGGGGTCGTA Hhal_1764 1938968 - 1938492 - | NADH-quinone oxidoreductase, B subunit Hhal_1765 1939315 - 1938959 - | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TERM 842 1939618 - 1939575 - R 71 -8 -4.17417 | gap 1, opp_overlap 1939597 1939617, overlap 1939576 GTAAGGAGAGATAAA TGGTGCCGAAGGCCGGACTCG AAC CG-GCACGGCTTTCGCCACCG CCCCCTCAAGACGGC secG 1940174 - 1939758 - | preprotein translocase subunit SecG Hhal_1767 1940933 - 1940184 - | Triose-phosphate isomerase TERM 843 1940872 - 1940895 + g 74 -13.2 -3.38361 | gap 1 GCACGCTCCGCCACG CGGCGGACCAG ATC CTGGT-CGCCG TTCATCTTCCAGTTT Hhal_1768 1942369 - 1941002 - | phosphoglucosamine mutase Hhal_1769 1943243 - 1942383 - | dihydropteroate synthase Hhal_1770 1945198 - 1943243 - | ATP-dependent metalloprotease FtsH Hhal_1771 1945883 - 1945245 - | ribosomal RNA methyltransferase RrmJ/FtsJ Hhal_1772 1946088 - 1946444 + | hypothetical protein Hhal_1773 1946946 - 1946449 - | hypothetical protein Hhal_1774 1947432 - 1946956 - | transcription elongation factor GreA Hhal_1775 1950650 - 1947429 - | carbamoyl-phosphate synthase, large subunit TERM 844 1947864 - 1947819 - G 73 -10.4 -3.87994 | gap 2 ACGCACGCTGACAAA GGCACAGCCGCCCCGCGGCAGG GTCA CCC-CCGCAGC-CAGCTGCGCC TTGGCGTAGGCCTCT TERM 845 1949183 - 1949164 - G 70 -8.5 -3.89346 | CGGGCATCGGAGAAA CCGCGGC GCTTGA GCCGCAG TAAGGCACCGGCATC Hhal_1776 1951853 - 1950714 - | carbamoyl-phosphate synthase, small subunit TERM 846 1951945 - 1951925 - R 100 -14 -5.1287 | CGGACATGCAAAAAA CGGGAGGG TTCGC CCCTCCCG TCCATGGAGTCGTCA Hhal_1777 1952775 - 1952059 - | adenylylsulfate reductase, thioredoxin dependent Hhal_1778 1953018 - 1953980 + | ABC transporter related Hhal_1779 1953977 - 1954804 + | ABC-2 type transporter Hhal_1780 1954842 - 1956167 + | nicotinate phosphoribosyltransferase Hhal_1781 1956355 - 1956164 - | hypothetical protein Hhal_1782 1956991 - 1956386 - | pyridoxamine-phosphate oxidase Hhal_1783 1958456 - 1956984 - | hypothetical protein TERM 847 1958507 - 1958479 - R 100 -13.1 -5.04385 | CACACCTCCAAAAAA CGGCGAGGGCC GACGACA AGCCCCCGCCG CGTGCCCGGTTAACG Hhal_1784 1959176 - 1958517 - | adenylate kinases Hhal_1785 1959268 - 1960020 + | pentapeptide repeat-containing protein Hhal_1786 1961196 - 1960051 - | Pyrrolo-quinoline quinone Hhal_1787 1961819 - 1961193 - | hypothetical protein Hhal_1788 1963118 - 1961847 - | histidyl-tRNA synthetase Hhal_1789 1963713 - 1963123 - | XRE family transcriptional regulator Hhal_1790 1964435 - 1963710 - | TPR repeat-containing protein TERM 848 1963962 - 1964004 + g 74 -15.5 -3.05844 | gap 1, opp_overlap 1963945 1963959 CGCCGGAGCGAACTC TGGTGCCGCCTCGACGGCCG CGTC CGCCCGTCG-GGCGGCGGCG TCTTCGCGTCCCGCG Hhal_1791 1965529 - 1964450 - | radical SAM protein TERM 849 1964755 - 1964765 + g 75 -8.2 -4.10657 | overlap 1964753 ACTCCCAGGTGATCC GCCG ATG CGGC TTTTCCGCGATATAG TERM 850 1965192 - 1965138 - G 70 -8.2 -3.85817 | opp_overlap 1965189, overlap 1965161 AGGTTCCGCGAGAAA CCGCCCTCGCCGGTGGCGCAAAAGGT GCA ACCCATCGGGCACCCGGCCTGGGAGG AGATGCACAGCGTCC TERM 851 1965520 - 1965464 - G 95 -18.6 -3.68073 | overlap 1965461 1965465 CAGGGTATCGAAGAA GGCCGCCAACCGGGGCCGATCGAGCC CTAGC AGCTCGACCGGACCCGACCGGCGCTC GGCATGCACCGCCTC TERM 852 1965518 - 1965465 - G 83 -19.6 -2.80522 | gap 1, overlap 1965461 1965464 AGGGTATCGAAGAAG GCCGCCAACCGGGGCCGATCGAGCC CTAGC AGCTCGACCGGACCCGACCGGCG-C TCGGCATGCACCGCC Hhal_1792 1965965 - 1965540 - | nucleoside-diphosphate kinase TERM 853 1966023 - 1966000 - R 100 -13.8 -5.4505 | GCTTTCAACAAAAAA GCCGCAGCGC TAAG GTGCTGCGGC GCCTTGGGCAGCCTG Hhal_1793 1966411 - 1966088 - | iron-sulfur cluster assembly accessory protein Hhal_1794 1967267 - 1966479 - | serine O-acetyltransferase TERM 854 1967060 - 1967037 - G 71 -10.2 -3.71848 | gap 1, overlap 1966993 GTGGTCGATGAAGAA CCGCCGGC-CG ATC CGCGCCGCCGG ATGGATCTCGATGCC TERM 855 1967293 - 1967311 + r 76 -13.8 -3.08133 | opp_overlap 1967289 1967288 TTTACGACAATTGGA CTCGCGCC AGC GGCGCGGG TTGAGTACGTGGCTG Hhal_1795 1968021 - 1967272 - | RNA methyltransferase TERM 856 1968474 - 1968424 - g 72 -8.3 -4.06419 | opp_overlap 1968429, overlap 1968427 1968468 GCCGTGCAGAAAGAA GACCAGCTCGAGGCGGCAGC-CATC TAC GATCCGCTGC-GCCAAGAGCTGTTC ACCGCCTCGCGGGGC Hhal_1796 1968094 - 1968903 + | inositol-phosphate phosphatase Hhal_1797 1970117 - 1968924 - | O-succinylhomoserine sulfhydrylase Hhal_1798 1971612 - 1970098 - | amidophosphoribosyltransferase Hhal_1799 1972220 - 1971657 - | colicin V production protein TERM 857 1972034 - 1972024 - G 72 -4.6 -4.39828 | AAGAGCCCGACAAAA CCGG CAC CCAG GCGGATCGTCGGCGA Hhal_1800 1972849 - 1972217 - | sporulation domain-containing protein Hhal_1801 1974157 - 1972853 - | FolC bifunctional protein Hhal_1802 1975164 - 1974154 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit Hhal_1803 1975982 - 1975161 - | tryptophan synthase, alpha subunit Hhal_1804 1977193 - 1975979 - | tryptophan synthase subunit beta Hhal_1805 1977806 - 1977183 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 858 1977906 - 1977879 - R 72 -3.2 -4.62069 | gap 1, overlap 1977881 GCTTTACGCCAAAAA CGGCC-ACTGCCC CCG GGTCGGGAGGCCG TAATGCGACGGGTAG Hhal_1806 1978667 - 1977867 - | tRNA pseudouridine synthase A Hhal_1807 1981147 - 1978679 - | putative membrane protein; K07288 uncharacterized membrane protein Hhal_1808 1982153 - 1981131 - | aspartate-semialdehyde dehydrogenase Hhal_1809 1982407 - 1983000 + | hypothetical protein TERM 859 1983074 - 1983017 - T 100 -19.8 -3.58726 | gap 1, opp_overlap 1983028 CGGTTCCACACATAA CGACCGTCATGCACGAGCCGGCCGCCC TTTAG GGGCGGCCGGCTCGTGTTTT-CGCCCG GAACGGCGGGCGTCG TERM 860 1983028 - 1983064 + T 100 -31.7 -4.07568 | opp_overlap 1983017 ATAACGACCGTCATG CACGAGCCGGCCGCCCT TTA GGGGCGGCCGGCTCGTG TTTTCGCCCGGAACG Hhal_1810 1984179 - 1983109 - | 3-isopropylmalate dehydrogenase Hhal_1811 1984940 - 1984218 - | 3-isopropylmalate dehydratase, small subunit Hhal_1812 1986312 - 1984912 - | 3-isopropylmalate dehydratase, large subunit Hhal_1813 1987559 - 1986390 - | major facilitator transporter Hhal_1814 1988667 - 1987564 - | chorismate synthase Hhal_1815 1988744 - 1989745 + | cobalamin synthesis protein, P47K Hhal_1816 1989906 - 1990649 + | exsB protein Hhal_1817 1990709 - 1991971 + | D-amino-acid dehydrogenase Hhal_1818 1992079 - 1992456 + | putative PAS/PAC sensor protein TERM 861 1993002 - 1993032 + G 71 -11.1 -3.61398 | gap 1 CACCCTGGGCAGCAC GGTGGTCGAGAGCC ACGA GGCTCCCG-CCGCC TTGTTCCGCAACCCC Hhal_1819 1992514 - 1993698 + | 4-coumarate--CoA ligase Hhal_1820 1993704 - 1995296 + | histidine ammonia-lyase Hhal_1821 1995888 - 1995301 - | Tfp pilus assembly protein FimT-like protein Hhal_1822 1996226 - 1995810 - | type IV pilin Hhal_1823 1996668 - 1996237 - | hypothetical protein TERM 862 1996689 - 1996642 - G 73 -9.7 -3.8647 | gap 1 ACCGAGTACAGCAAA GCCGGCCTGCCGGGAGGCCACC GTCAA GGCAGCCTCCC-GTGGATCGGC ACTGTGACCGTCTGG Hhal_1824 1997597 - 1996665 - | hypothetical protein Hhal_1825 1998055 - 1997606 - | hypothetical protein Hhal_1826 1998303 - 1998806 + | hypothetical protein Hhal_1827 1998922 - 1999281 + | hypothetical protein Hhal_1828 1999347 - 2000279 + | TPR repeat-containing protein Hhal_1829 2000370 - 2001389 + | hypothetical protein Hhal_1830 2002417 - 2001407 - | hypothetical protein Hhal_1831 2003739 - 2002414 - | tetratricopeptide TPR_4 Hhal_1832 2004346 - 2003753 - | hypothetical protein Hhal_1833 2004456 - 2004902 + | hypothetical protein Hhal_1834 2005853 - 2004897 - | hydroxymethylbutenyl pyrophosphate reductase TERM 863 2005306 - 2005294 - G 72 -6.9 -4.26903 | TGGATGGCAGGAAAA CGCCG CTG CAGCG CCTCAACGATACCGG Hhal_1835 2006349 - 2005876 - | lipoprotein signal peptidase TERM 864 2006367 - 2006397 + r 71 -12.5 -3.28712 | CCTCCCCCGTCAGGC CGTGGCCCGGTAC TCGCC GGACCCGGCCACG TTCTCGACGCAGCGG ileS 2009186 - 2006361 - | isoleucyl-tRNA synthetase Hhal_1837 2010135 - 2009200 - | riboflavin biosynthesis protein RibF Hhal_1838 2011772 - 2010183 - | integral membrane protein MviN TERM 865 2011171 - 2011150 - G 71 -10.1 -3.72576 | overlap 2011151 TCGCGGTGGAGGAAA GGCAGCTGC AGGA GCAGCTGCA GGACACCGGCCACGG Hhal_1839 2011853 - 2012983 + | hypothetical protein TERM 866 2013375 - 2013324 - g 91 -21.6 -3.08679 | gap 1, overlap 2013354 CGCCCTGATCGAACA CGCCGGCCTGACCCGCGCCGAGGCC GAA GACCTCGCC-CGGGTCAAGCTGGCA CTAACCGGTCTCGAC Hhal_1840 2012977 - 2013768 + | ABC transporter related Hhal_1841 2013769 - 2014710 + | hypothetical protein Hhal_1842 2014707 - 2015333 + | putative ABC-type uncharacterized transport system Hhal_1843 2015447 - 2015713 + | ribosomal protein S20 TERM 867 2015746 - 2015767 + T 93 -14.4 -4.05446 | TGCAGCCATCGGATG CGGGCGCC CTCTGA GGCGCCCG TTTCTCGTTCCAGCC Hhal_1844 2017667 - 2015808 - | ankyrin TERM 868 2016141 - 2016124 - G 70 -3.3 -4.4009 | gap 1, opp_overlap 2016126, overlap 2016125 2016126 GTGTACGGCAGAAAA CG-GGCGC TAT GCCCCTCG TATCCGGCGCTATCG Hhal_1845 2018801 - 2017671 - | gamma-glutamyl kinase TERM 869 2018785 - 2018767 - G 78 -16 -3.09635 | ACCTTGATCACCCAA CGCTGCGC CTG GCGCAGCG CCTCACGCCGTCTCA Hhal_1846 2019828 - 2018788 - | GTP1/OBG domain-containing protein TERM 870 2019869 - 2019888 + r 81 -12.8 -3.57144 | opp_overlap 2019869 TCCGTATACAAAAAA GCCCCGCT CCAT GGCGGGGC TTTGCAGGTCCGGGC TERM 871 2019888 - 2019869 - R 100 -12.1 -5.36441 | opp_overlap 2019869 TCCGTATACAAAAAA GCCCCGC TCCATG GCGGGGC TTTGCAGGTCCGGGC rpmA 2020178 - 2019921 - | 50S ribosomal protein L27 Hhal_1848 2020508 - 2020194 - | ribosomal protein L21 Hhal_1849 2021722 - 2020751 - | trans-hexaprenyltranstransferase Hhal_1850 2022284 - 2021781 - | hypothetical protein Hhal_1851 2022401 - 2024032 + | choline/carnitine/betaine transporter Hhal_1852 2025421 - 2024066 - | uncharacterized membrane-anchored protein TERM 872 2024587 - 2024621 + g 90 -17.9 -3.44051 | TGCCGATACGCTCAA CCTGCGCGGCCAGCT CCATC AGCTGGCTGAGCAGG TTCTGCTCGTCACGC Hhal_1853 2025499 - 2026035 + | cobalbumin biosynthesis enzyme TERM 873 2026729 - 2026674 - g 85 -16.9 -3.61398 | gap 3 CGCCCTGCTCAACAA GGCAGCAC-CGGGACTGGTCG-GGCCGG GTA CCGGCCACGACGCGTCCGGGGTGC-GCC GCAAGGCCCAGGCTG Hhal_1854 2026090 - 2027172 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Hhal_1855 2027169 - 2027798 + | phosphoglycerate mutase cobS 2027795 - 2028547 + | cobalamin synthase Hhal_1857 2028557 - 2029483 + | cobalamin biosynthesis protein CobD Hhal_1858 2029491 - 2030516 + | aminotransferase, class I and II Hhal_1859 2030657 - 2031637 + | oxidoreductase domain-containing protein TERM 874 2032785 - 2032727 - g 72 -13.2 -3.14881 | gap 3, overlap 2032715 GAACGCGCCCACCAA GTGGCCGAGGCGGTG-CGG--CAGGCC GTTCAGCA GGCCTGAGCCGACACCGCCCCGTCCCC CGCCTTACCCCGTCG Hhal_1860 2031659 - 2032765 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 875 2032802 - 2032847 + T 90 -16.7 -3.31144 | gap 1, overlap 2032803 GCCTTACCCCGTCGT CGCAGCCG-ACGCCGGCTGCCG TCC CGGCAGCCGGCGCACGACGGCC TTCTCCAGCTCGACG TERM 876 2032803 - 2032846 + T 91 -20.2 -2.58544 | gap 1, overlap 2032802 CCTTACCCCGTCGTC GCAGCCG-ACGCCGGCTGCCG TCC CGGCAGCCGGCGCACGACGGC CTTCTCCAGCTCGAC Hhal_1861 2035543 - 2032790 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 877 2033273 - 2033234 - G 70 -12 -3.29109 | gap 1, overlap 2033224 AAAACCGGAGAGCAA GGGGGCGTTGG-GGTCCCG CGG CGGGCGCTCCATCACCCCC GGTTCACCGGGCTCA TERM 878 2034965 - 2034923 - G 85 -19.2 -3.01924 | gap 1, opp_overlap 2034937 2034937 CAGGGTGCCCGAATA GGCC-ATGCCGCGGCGGTC ACCGAG GTCCGCCGCGGCATCGACC GCCTCGGTACCCTTC TERM 879 2035402 - 2035346 - G 100 -26.5 -3.19389 | opp_overlap 2035350, overlap 2035338 GAAGTGACGCAGGAA GCGCACCACGGGCCCAGCGCGCTCCGG CGG CCGGAGCTCATTGGGCCCGTGGCTCTC TAGCCGTGCCGCGGC TERM 880 2035350 - 2035398 + g 100 -26.7 -2.88544 | opp_overlap 2035338 2035346 TGACGCAGGAAGCGC ACCACGGGCCCAGCGCGCTCCGG CGG CCGGAGCTCATTGGGCCCGTGGC TCTCTAGCCGTGCCG Hhal_1862 2036465 - 2035584 - | UspA domain-containing protein Hhal_1863 2038138 - 2036462 - | sodium/hydrogen exchanger TERM 881 2038177 - 2038163 - R 100 -8.5 -5.1287 | CTGATATGGAAAAAA CGGCG TGAAT CGCCG AGTTCAGCGCACGTG Hhal_1864 2039452 - 2038181 - | glucose-1-phosphate adenylyltransferase TERM 882 2038841 - 2038877 + g 75 -8.6 -4.18018 | gap 1, opp_overlap 2038834, overlap 2038859 GGATACCAGGGCCAC GTCGTCGTGGCCCG-GC ATCG GCTCGGGCTGCTGCGGC TTTTCGGTCAGCGCA Hhal_1865 2039683 - 2040816 + | metal dependent phosphohydrolase Hhal_1866 2040862 - 2041296 + | hypothetical protein Hhal_1867 2041308 - 2042378 + | DNA-directed DNA polymerase Hhal_1868 2043276 - 2042371 - | diguanylate cyclase Hhal_1869 2043648 - 2044331 + | putative transcriptional regulator Hhal_1870 2045452 - 2044328 - | radical SAM domain-containing protein Hhal_1871 2045539 - 2046345 + | hypothetical protein Hhal_1872 2046332 - 2046934 + | AMMECR1 domain-containing protein Hhal_1873 2048704 - 2047211 - | hypothetical protein Hhal_1874 2049308 - 2048811 - | putative nucleoside-diphosphate-sugar epimerase Hhal_1875 2050854 - 2049334 - | outer membrane efflux protein Hhal_1876 2053894 - 2050841 - | acriflavin resistance protein Hhal_1877 2055108 - 2053891 - | RND family efflux transporter MFP subunit Hhal_1878 2057344 - 2055209 - | DNA ligase, NAD-dependent TERM 883 2055575 - 2055548 - G 71 -11.2 -3.61398 | opp_overlap 2055551 2055553 CGGCTCGGCGAAGAA GCCGGCGATGGC CCGG GCGACCACCGGC CCCACGTCTTCGATG Hhal_1879 2058600 - 2057368 - | cell division protein ZipA Hhal_1880 2062111 - 2058614 - | chromosome segregation protein SMC TERM 884 2059832 - 2059859 + g 72 -14 -3.18023 | overlap 2059830 GGTGGCGGCGCCGGC GGCCGCCTCCTC GGCA GCGGCGGCGGCC TCTTCCTGCTCCTCG TERM 885 2061033 - 2061088 + g 75 -9.7 -3.99324 | gap 3 ACCTGCTCCTCTTCG CTGGCCG-CCTCCAGG-GCGGGCTCCAG CTC CTCGA-CCCGCTCCTCAAGGACGGCCCG TTTCTCCTGGTCGGC TERM 886 2061306 - 2061344 + g 81 -9.5 -4.30576 | overlap 2061302 GCCTCGATCTCGCGC TCGGCGCGGCGCTGC TCCGCCACC GCGGCCTCGCGCTGA TTTTCCTGATCACGG Hhal_1881 2062183 - 2062539 + | GTP cyclohydrolase I Hhal_1882 2062553 - 2063440 + | glutamyl-tRNA synthetase, class Ic Hhal_1883 2065471 - 2063423 - | TonB-dependent receptor TERM 887 2063933 - 2063888 - G 74 -14.8 -3.01712 | gap 2, opp_overlap 2063899 GTCCTCCTCCGAATA CGCCTCATCCTCCTGCGGCAGG TTCT CCTCCCGCAGGTGG-T-AGGCG GCCACCACCAGCTGC TERM 888 2065640 - 2065664 + H 90 -15.7 -3.53012 | opp_overlap 2065639 2065640 2065637 GATTCGCTAGAACAC CCCTGCCCACC AGT GGTGGGTGGGG TTTGCAAGCAACCCC Hhal_1884 2065699 - 2066577 + | hypothetical protein Hhal_1885 2071395 - 2066587 - | hypothetical protein Hhal_1886 2072741 - 2071440 - | membrane protein involved in aromatic hydrocarbon degradation TERM 889 2072372 - 2072355 - G 72 -3.3 -4.58424 | gap 1, overlap 2072357 GACGACGACAGAAAA GCCCACCG TGA CGG-GGCC TAGGGGCTGGGTGGT Hhal_1887 2073685 - 2072738 - | peptidase M48, Ste24p TERM 890 2073568 - 2073512 - G 85 -18.5 -3.05384 | CTGCCGCGGATTGAA GTCGACGGCCTGGACCCCACCGGCGTC GCC GGCCCCGGTGTGGCCCGTGCCGTTGAC GCCGCCCTGCGCCCC Hhal_1888 2074164 - 2073682 - | hypothetical protein Hhal_1889 2076098 - 2074161 - | putative adenylate/guanylate cyclase Hhal_1890 2076770 - 2076123 - | hypothetical protein Hhal_1891 2079040 - 2076839 - | hypothetical protein Hhal_1892 2080467 - 2079079 - | ThiS, thiamine-biosynthesis TERM 891 2080897 - 2080909 + H 75 -9.1 -4.00445 | overlap 2080891 CGGACCTGCCGCCGG CAGCG TGG CGCTG TTCTTGTTGGTGCTC TERM 892 2083714 - 2083690 - g 74 -14.9 -3.01791 | ACCTCTTCTCGAACA CCGCCGATGCC TGC GGCCCCGGCGG ACGGATCGCGATCTC Hhal_1893 2081049 - 2084006 + | multi-sensor signal transduction histidine kinase Hhal_1894 2084012 - 2085382 + | two component, sigma54 specific, Fis family transcriptional regulator Hhal_1895 2085550 - 2087487 + | acetate--CoA ligase TERM 893 2087727 - 2087755 + G 75 -8.2 -4.23674 | gap 1, overlap 2087724 2087729 TGCACCTGCTTTTCG GCTGCATCGCG CTGATCTT CGCGATGC-GC TTTCTCTTCGTGGAC Hhal_1896 2087624 - 2087818 + | hypothetical protein Hhal_1897 2088547 - 2087948 - | TPR repeat-containing protein Hhal_1898 2088780 - 2088544 - | hypothetical protein TERM 894 2088607 - 2088589 - G 72 -8.8 -3.98448 | opp_overlap 2088603 CAGGAAGAAAGAGAA CACCGGCA GGA TGACGGTG GCCAGCACACGGGCC TERM 895 2088847 - 2088813 - R 89 -19.2 -2.52795 | overlap 2088800 2088801 AACCGCTTGAAGGGA GGGGCGCAGGGGGCCG GAA CGACCCCCTGCGCTAC CCGGTTGCAGTGGTC Hhal_1899 2091170 - 2088879 - | Na+/solute symporter TERM 896 2091372 - 2091382 + H 72 -8.2 -4.12532 | opp_overlap 2091361 2091371 ACCAGTGGGTAACAC CCGC GCA GCGG TTTGTCTCTGCCGCC TERM 897 2093236 - 2093199 - g 77 -15 -3.1372 | overlap 2093197 CACCGGCCACGAAGA GCTGCTCGATCTGCTG CTGACC CACCAGATCGAACAGC ATCAGGCGGGCACCG Hhal_1900 2091448 - 2093370 + | cyclic nucleotide-binding protein Hhal_1901 2093454 - 2093831 + | response regulator receiver protein Hhal_1902 2093831 - 2095954 + | putative PAS/PAC sensor protein Hhal_1903 2095956 - 2096153 + | hypothetical protein Hhal_1904 2096159 - 2098957 + | integral membrane sensor signal transduction histidine kinase TERM 898 2099337 - 2099363 + G 93 -15.9 -3.91897 | gap 1, overlap 2099337 CCTGGCCGAGCGCGA CCC-CCACCGCC CCCT GGCGGTGGTGGG TTTCTCGCTGAGCGG TERM 899 2099337 - 2099362 + G 75 -16.1 -2.94924 | overlap 2099337 CCTGGCCGAGCGCGA CCCCCACCGCC CCCT GGCGGTGGTGG GTTTCTCGCTGAGCG Hhal_1905 2098954 - 2099937 + | alpha/beta hydrolase fold Hhal_1906 2102032 - 2099951 - | TonB-dependent receptor Hhal_1907 2103964 - 2102513 - | cobyric acid synthase CobQ Hhal_1908 2104566 - 2103958 - | cob(I)alamin adenosyltransferase Hhal_1909 2105908 - 2104628 - | cobyrinic acid a,c-diamide synthase Hhal_1910 2106768 - 2105917 - | UspA domain-containing protein Hhal_1911 2108284 - 2106791 - | sulphate transporter Hhal_1912 2108621 - 2109412 + | cobyrinic acid a,c-diamide synthase Hhal_1913 2109880 - 2109425 - | hypothetical protein Hhal_1914 2110320 - 2109931 - | CrcB protein Hhal_1915 2110721 - 2110317 - | camphor resistance CrcB protein Hhal_1916 2112060 - 2110855 - | RND family efflux transporter MFP subunit Hhal_1917 2114426 - 2112063 - | hypothetical protein Hhal_1918 2115133 - 2114423 - | ABC transporter related TERM 900 2114900 - 2114861 - G 73 -7 -4.21439 | gap 1, overlap 2114849 2114871 GAACTGGAAGACAAA GCCGACGAAG-TGGCGGCG GAA CGCCGTCAGCTCCGCCTCC CCGGCTCGGGTGAGA Hhal_1919 2115951 - 2115235 - | hypothetical protein TERM 901 2115797 - 2115758 - G 100 -4.3 -5.56673 | gap 3, overlap 2115772 ACCGAGAAGAAAAAA CGCAGGGCCAG-GAAGGCGA GCG CCGCCTGCACCGG-C-TGCG ACTCGGCCAGCTGCC Hhal_1920 2116523 - 2115948 - | hypothetical protein Hhal_1921 2117290 - 2116514 - | ABC transporter related Hhal_1922 2118360 - 2117299 - | transport system permease protein Hhal_1923 2119214 - 2118360 - | periplasmic binding protein Hhal_1924 2119813 - 2119238 - | hypothetical protein Hhal_1925 2120541 - 2119972 - | ATP--cobalamin adenosyltransferase Hhal_1926 2122528 - 2120645 - | TonB-dependent receptor Hhal_1927 2123010 - 2123771 + | precorrin-6x reductase TERM 902 2125159 - 2125140 - g 75 -8.6 -4.18018 | gap 1, opp_overlap 2125158 GCTGGCCACCGAAAA CCTGG-AGC TGC GCTACCAGG CCTACGAGAGCCATT TERM 903 2125888 - 2125842 - g 71 -2.7 -4.64657 | gap 1 CCAAACCTTCAAAAA CGTCGACAGCGCCCGCGCCCAG GGGG CCGAGCTCAAGCTCGG-CGCCG CCTTCGACCCGCAAC Hhal_1928 2124217 - 2126247 + | TonB-dependent receptor TERM 904 2126801 - 2126825 + G 73 -12.1 -3.40403 | overlap 2126792 CGGGCTCTCGGTGCT CGGCACCACCG GGT TGTTGGTGCCG TTCTCCTGCGCCGCC cbiD 2126250 - 2127371 + | cobalt-precorrin-6A synthase Hhal_1930 2128070 - 2127375 - | hypothetical protein Hhal_1931 2128259 - 2128936 + | hypothetical protein TERM 905 2128985 - 2129011 + F 100 -21.6 -5.24129 | opp_overlap 2128940 CGTCCAGCGCACGAT GACCCCGGGGCC TCG GGCTCCGGGGTC TTTTTTATGGGCACG Hhal_1932 2129147 - 2130358 + | beta-lactamase domain-containing protein Hhal_1933 2130459 - 2131946 + | uroporphyrin-III C-methyltransferase TERM 906 2132025 - 2131984 - T 100 -26 -2.53263 | gap 1, overlap 2131993 2132008 CCCACCCCCAACGCA GGCACCGAAGCCCCGGACC GAAAT GG-CCGGGGCTCCGGTGCC TCTGGATCGCACTGG Hhal_1934 2133000 - 2132062 - | DMSO reductase anchor subunit (DmsC) Hhal_1935 2133728 - 2133015 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Hhal_1936 2136649 - 2133728 - | molybdopterin oxidoreductase Fe4S4 region TERM 907 2136202 - 2136188 - G 73 -12.8 -3.4252 | opp_overlap 2136183 2136195 GTTCACCGAGCAGAA GCCGCC GTG GGCGGC CCAGTTGATGGTCCC Hhal_1937 2136945 - 2136715 - | SirA family protein Hhal_1938 2137149 - 2136958 - | hypothetical protein Hhal_1939 2137438 - 2139183 + | 5'-nucleotidase domain-containing protein Hhal_1940 2139158 - 2140117 + | beta-lactamase domain-containing protein Hhal_1941 2140177 - 2140662 + | transmembrane proetin, twin-arginine translocation pathway signal Hhal_1942 2140716 - 2141009 + | sulfur oxidation protein TERM 908 2141063 - 2141035 - T 89 -19.6 -2.63596 | opp_overlap 2141035 CCGTACCCGACACGA CGAGGGCACCGG CTTGC CCGGCGCCCTCG TCGTGTCGGCCCCGC TERM 909 2141035 - 2141063 + T 83 -17.4 -2.62184 | opp_overlap 2141035 CCGTACCCGACACGA CGAGGGCACCGG CTTGC CCGGCGCCCTCG TCGTGTCGGCCCCGC Hhal_1943 2141594 - 2141088 - | hypothetical protein Hhal_1944 2142186 - 2141623 - | protein-disulfide isomerase-like protein TERM 910 2142156 - 2142117 - G 74 -15 -3.02511 | gap 1, overlap 2142120 TGCATCCCCCGAACA CCA-GCACCCGGGCGGCAC GGC GTGCCGTCCGAATGCGCGG CGCGCGGGCGCTCGT TERM 911 2142152 - 2142120 - G 78 -17.7 -2.73994 | overlap 2142117 ATCCCCCGAACACCA GCACCCGGGCGGCAC GGC GTGCCGTCCGAATGC GCGGCGCGCGGGCGC Hhal_1945 2143511 - 2142204 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Hhal_1946 2143850 - 2143524 - | cytochrome c, class I Hhal_1947 2145080 - 2143899 - | hypothetical protein Hhal_1948 2145389 - 2146843 + | hypothetical protein Hhal_1949 2147531 - 2146956 - | hypothetical protein Hhal_1950 2148268 - 2147534 - | hypothetical protein Hhal_1951 2148404 - 2149663 + | sulfite reductase, dissimilatory-type alpha subunit TERM 912 2150342 - 2150296 - g 70 -13.1 -3.29947 | opp_overlap 2150292, overlap 2150292 CATCCAGCACACCAA GCCGCCCA-AGATCCAGCACGAC TTG GTCG-GCCAGGTCTGTGAGCGGC CCTCGGTGGTGGCGC Hhal_1952 2149712 - 2150800 + | sulfite reductase, dissimilatory-type beta subunit Hhal_1953 2150815 - 2151174 + | DsrE family protein Hhal_1954 2151212 - 2151604 + | DsrE family protein Hhal_1955 2151616 - 2151915 + | DsrH family protein Hhal_1956 2151981 - 2152313 + | DsrC family protein Hhal_1957 2152364 - 2153110 + | nitrate reductase, gamma subunit Hhal_1958 2153118 - 2154671 + | hypothetical protein TERM 913 2154940 - 2154895 - g 70 -14.8 -2.78384 | CGGCCGGCGAGGAGA TCCGCG-GCTGGCTCCACGCCG CCCG CGGCCTGGAGC-AGCCCGCCGA GGGTGAAGAGTGGCA Hhal_1959 2154723 - 2156666 + | putative glutamate synthase (NADPH) small subunit Hhal_1960 2156679 - 2157092 + | hypothetical protein Hhal_1961 2157082 - 2157819 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 914 2158617 - 2158638 + G 71 -10.1 -3.80573 | CCCTCGCCTACCAGC CGGGCCATC GGGA GATCGCCCG TTTCCTCCTCGTCGA TERM 915 2158786 - 2158805 + G 76 -7.8 -4.32034 | CTCGGGGGTTGCCCT GATCGGCG GGTT CGCCCATC TTTTCGTGATGATCG Hhal_1962 2157833 - 2159083 + | polysulphide reductase, NrfD Hhal_1963 2159092 - 2160492 + | cobyrinic acid a,c-diamide synthase TERM 916 2160642 - 2160630 - f 72 -3.4 -4.63592 | CCCTAACAAAAACAA GGAA TTAAG TTCC CAAAGGGGCCCCCGG Hhal_1964 2160677 - 2162104 + | histidine kinase Hhal_1965 2162082 - 2162735 + | two component LuxR family transcriptional regulator TERM 917 2163267 - 2163247 - g 71 -2.4 -4.63932 | opp_overlap 2163266 GATGCGGCAACAAAA CGGTGGTG CGCAT CGGCACCG GCAACATCAAGTCGC Hhal_1966 2162907 - 2164172 + | protein of unknown function DUF395, YeeE/YedE TERM 918 2164178 - 2164207 + G 72 -13.5 -3.1247 | overlap 2164181 TGCGCTTTGACGGCA ATGGGCGGTGGGC ACCC GCCCACCGCCTGA TTCCCTGTCACGAGT TERM 919 2164181 - 2164204 + G 83 -19.6 -2.77182 | overlap 2164178 GCTTTGACGGCAATG GGCGGTGGGC ACCC GCCCACCGCC TGATTCCCTGTCACG Hhal_1967 2164162 - 2165928 + | sulfate transporter Hhal_1968 2169475 - 2165951 - | hypothetical protein Hhal_1969 2171193 - 2169472 - | surface antigen (D15) TERM 920 2171042 - 2170994 - G 83 -15.1 -3.53811 | overlap 2171029 CCCACGGCCTGCAAA CCGCGTTCGGCCCGCTCCACCGC GCG GCGACGGAACGCGGTGATCGCGG CGGGATCGGCAGACG Hhal_1970 2171291 - 2172850 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Hhal_1971 2173630 - 2172869 - | glutaredoxin TERM 921 2173114 - 2173087 - G 74 -14.8 -3.02144 | CCAGCGCTGGCAACA CGCCCCCGGCCA TCAC CGACCAGGGGCG CTGGTCGCGCAGCAG Hhal_1972 2173776 - 2174327 + | hypothetical protein Hhal_1973 2175674 - 2174385 - | aminotransferase, class I and II Hhal_1974 2175795 - 2176787 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Hhal_1975 2176784 - 2178196 + | amidase Hhal_1976 2178256 - 2179710 + | aldehyde dehydrogenase Hhal_1977 2179759 - 2180094 + | TraR/DksA family transcriptional regulator Hhal_1978 2181041 - 2180091 - | lysine--tRNA ligase Hhal_1979 2181610 - 2181041 - | translation elongation factor P TERM 922 2182592 - 2182550 - g 81 -7.7 -4.66163 | gap 2, opp_overlap 2182550 ACGTGGACGCAAAAA CCGGGCAGCGGCTCTGGGC GGAACTG GCCCGGAGCT--TGCCCGG TTATCTGGTGCCGCG TERM 923 2182550 - 2182592 + G 74 -12.1 -3.54475 | gap 2, opp_overlap 2182550 ACGTGGACGCAAAAA CCGGGCAGCGGCTCTGGGC GGAACTG GCCCGGAGC--TTGCCCGG TTATCTGGTGCCGCG Hhal_1980 2181640 - 2182668 + | lysine 2,3-aminomutase YodO family protein Hhal_1981 2183542 - 2182649 - | peptidase M48, Ste24p Hhal_1982 2185891 - 2183639 - | DNA topoisomerase IV subunit A TERM 924 2183717 - 2183694 - G 80 -16 -3.14878 | gap 1, overlap 2183692 CGCGGCAACTGAACA CCGCGCCGGCC CCG GGC-GGCGCGG AACGCCTCCAGATCG Hhal_1983 2187837 - 2185927 - | DNA topoisomerase IV subunit B TERM 925 2187981 - 2187993 + H 75 -10.5 -3.90744 | CGTGGCTCGCACCCT GCCGC TTC GCGGC TTATTTGACCACCCC Hhal_1984 2188035 - 2188298 + | exodeoxyribonuclease VII, small subunit Hhal_1985 2188267 - 2189190 + | polyprenyl synthetase Hhal_1986 2189369 - 2190148 + | putative GTP cyclohydrolase TERM 926 2190155 - 2190136 - f 78 -12.8 -3.44527 | GATCGAGCAGGACAA GCGGGGGC GCTG ACCCCCGC GACGCCTCGGCACTT TERM 927 2190542 - 2190573 + G 72 -14.4 -3.14881 | gap 1 AACTCTACGTGGAGA CG-CTGCGCCGCTGC TGC GAAGCGGCGCGGGCG TTGATCCAGGCCTTC Hhal_1987 2190352 - 2190984 + | TetR family transcriptional regulator TERM 928 2191024 - 2191046 + F 89 -18.4 -2.84812 | TCGTCCCCCGTGTCG CCGGCCCGGC CCC GCCGGGTCGG TGTGATGGTCTCCGT Hhal_1988 2191051 - 2192139 + | RND family efflux transporter MFP subunit Hhal_1989 2192146 - 2195241 + | acriflavin resistance protein TERM 929 2195275 - 2195243 - f 88 -17.6 -3.1505 | ACTACTTCGGATGAA GGCGCCCGGGGGCC CTGGT GGCCCCCGCGCCCC GCGATAAGGACCAAC Hhal_1990 2195295 - 2196791 + | TolC family type I secretion outer membrane protein Hhal_1991 2196801 - 2197256 + | ferric uptake regulator family protein Hhal_1992 2197253 - 2198422 + | cation diffusion facilitator family transporter Hhal_1993 2199395 - 2198409 - | serine/threonine protein kinase TERM 930 2199137 - 2199097 - G 74 -12.6 -3.60971 | gap 2 AGGGCAATGCGGAAA CCG-TG-GCTGTGGGCCAGG GTC CCTGCCCCGCAGCGCAGCGG CGCTACCACCGGCAC Hhal_1994 2199531 - 2199839 + | hypothetical protein Hhal_1995 2199916 - 2200845 + | peptidase M23B Hhal_1996 2200755 - 2201441 + | hypothetical protein Hhal_1997 2201556 - 2202710 + | hypothetical protein TERM 931 2202755 - 2202778 + F 100 -21 -5.63103 | opp_overlap 2202749 GCCGGAACAGGCCAA GGGGCCGCGC CTCG GCGCGGCCCC TTTTTTTGATTGGGG Hhal_1998 2202899 - 2203366 + | phasin family protein TERM 932 2203390 - 2203419 + T 100 -21.5 -4.45168 | GGGAGGCGCGGTGAC GGAGTCGGTGCCC CGCG GGGCACCGGCTCC TTTGTGTTTTCAGCC Hhal_1999 2204749 - 2203460 - | phosphoribosylamine--glycine ligase Hhal_2000 2206356 - 2204773 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Hhal_2001 2206673 - 2206377 - | Fis family transcriptional regulator Hhal_2002 2207706 - 2206747 - | Zinc finger-domain-containing protein TERM 933 2207221 - 2207236 + g 71 -11.8 -3.61398 | GGCGGCCACGAGCCA GCGGCG GCCG CGCCGC TTCTTCGGACCGCCG Hhal_2003 2208626 - 2207745 - | ribosomal protein L11 methyltransferase Hhal_2004 2208971 - 2208630 - | hypothetical protein Hhal_2005 2209588 - 2209058 - | inorganic diphosphatase Hhal_2006 2209809 - 2210309 + | hypothetical protein Hhal_2007 2210322 - 2211686 + | UDP-N-acetylmuramate Hhal_2008 2211683 - 2212291 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 934 2212665 - 2212636 - g 72 -14.3 -3.16961 | gap 1, opp_overlap 2212633, overlap 2212634 2212627 GCAGAACAGCCAACA CCGCGGCTGGATGC CGA GC-TCCAGCCGCTG GCCGATCTACTGGAG Hhal_2009 2212291 - 2212866 + | peptidase S16, lon domain-containing protein TERM 935 2212944 - 2212992 + T 78 -8.1 -4.36914 | gap 1, overlap 2212947 2212947 GAGCAGCGCAGCCCC CGGCGGGGGTTCAGCGCGAACC TTTGCC GGTTCGCGCTGAA-CAGCGAGG TTTTGTCCGAGCGGC Hhal_2010 2215123 - 2213129 - | phosphoesterase, PA-phosphatase related TERM 936 2214062 - 2214017 - G 71 -10.9 -3.54741 | gap 1, overlap 2213991 2214018 GACCAGCGTGGTAAA CCCCGCCAGCGCCGGCGACGGG AAG CCCAGCGGCGGCGCCC-CGCGG TAGAGCGCGACGGCG TERM 937 2215208 - 2215183 - R 100 -16.1 -5.93809 | GCCGCAGAAAAAAAA TCCGGAGGGGC CGCA GCCCCGCCGGA TCGTCGGATACCAGG TERM 938 2215247 - 2215222 - R 70 -13.9 -2.62396 | GATCGTCGGATACCA GGGCCGGGACC CGCA GGCCCCGGCGC GGTCTCGCTCAGACG Hhal_2011 2216536 - 2215256 - | glutamate-1-semialdehyde-2,1-aminomutase Hhal_2012 2217208 - 2216579 - | thiamine-phosphate pyrophosphorylase Hhal_2013 2217386 - 2217216 - | rubredoxin-type Fe(Cys)4 protein Hhal_2014 2218700 - 2217420 - | major facilitator transporter TERM 939 2217637 - 2217615 - G 78 -12 -3.6968 | CCAGAACCCGAAGAA CTCCGCCG CACGTCC CGGCGGAG CGAACAGCCCCACCA Hhal_2015 2218850 - 2220142 + | DEAD/DEAH box helicase domain-containing protein Hhal_2016 2220231 - 2220665 + | CBS domain-containing protein TERM 940 2221513 - 2221482 - g 74 -10.8 -3.77206 | gap 1, overlap 2221485 GACAACTGGAGGAAA CCAGCCAGCGGGCGG CGG CCGCC-GCTGGATCG CCCTCCGGCGGCCAG Hhal_2017 2220686 - 2221591 + | MotA/TolQ/ExbB proton channel Hhal_2018 2221607 - 2222335 + | OmpA/MotB domain-containing protein Hhal_2019 2222398 - 2223078 + | rhomboid family protein TERM 941 2223172 - 2223190 + G 70 -12.4 -3.38812 | opp_overlap 2223151, overlap 2223170 ACGACGATCGCGCCA CGGTCCGC CTC GTGGACCG TCTTCTTGCCGACGC Hhal_2020 2223153 - 2224313 + | type II secretion system protein E Hhal_2021 2224301 - 2225491 + | type II secretion system protein Hhal_2022 2225508 - 2226398 + | prepilin peptidase Hhal_2023 2226395 - 2227027 + | dephospho-CoA kinase Hhal_2024 2227039 - 2227824 + | hypothetical protein TERM 942 2227869 - 2227827 - T 95 -15.5 -4.09685 | gap 1, overlap 2227828 CTGCACGCTGTAAAA CCGCGACC-GCTATCGGCGG CCCG CCTCCGCCAGCAGGCCGCGG ATAGCCGCCACTCCC TERM 943 2227881 - 2227828 - T 80 -15.2 -3.05597 | overlap 2227827 TGCACGCTGTAAAAC CGCGACCGCTATCGGCGGCCCGCC TCCGCC AGCAGGCCGCGGATAGCCGCCACT CCCTGCCCGCCGCAG Hhal_2025 2228804 - 2227836 - | mutator MutT protein TERM 944 2228063 - 2228088 + g 74 -13.9 -3.28712 | opp_overlap 2228051 AATCGGCCCCGCAGG CGGCGGCGCGC TCCA GCTCGTCGCCG TTGTGGCAAGAAGCG Hhal_2026 2230018 - 2228816 - | arginine biosynthesis bifunctional protein ArgJ Hhal_2027 2232821 - 2230020 - | preprotein translocase, SecA subunit TERM 945 2233039 - 2233075 + G 70 -12.1 -3.28712 | opp_overlap 2233024 2233025 CTGCACCGGATCGCC CCGCGCCTGGCGCAGCG CCC CGGTCCGCTGCGCGCGG TTATCGACCACGCCC Hhal_2028 2232934 - 2233458 + | hypothetical protein Hhal_2029 2233841 - 2233455 - | monovalent cation/proton antiporter, MnhG/PhaG subunit Hhal_2030 2234106 - 2233834 - | multiple resistance and pH regulation protein F Hhal_2031 2234579 - 2234106 - | cation antiporter TERM 946 2234450 - 2234412 - G 80 -16.7 -3.19157 | gap 1, opp_overlap 2234411 2234428, overlap 2234403 GACGAAGCGGATGAA CCGC-GGCACTCGCTGGC CGTA GCCGGCGAGCGCCGGCAG CTGGTTCTGCATGAC Hhal_2032 2236090 - 2234576 - | NADH dehydrogenase (quinone) Hhal_2033 2236434 - 2236087 - | putative monovalent cation/H+ antiporter subunit C Hhal_2034 2236867 - 2236439 - | putative monovalent cation/H+ antiporter subunit B Hhal_2035 2239182 - 2236864 - | putative monovalent cation/H+ antiporter subunit A Hhal_2036 2239348 - 2240769 + | hypothetical protein Hhal_2037 2240766 - 2241533 + | phospholipid/glycerol acyltransferase Hhal_2038 2242687 - 2241605 - | porin Hhal_2039 2243495 - 2242710 - | prolipoprotein diacylglyceryl transferase TERM 947 2243106 - 2243070 - G 72 -14.3 -3.14132 | CTCGCCGTTGATGAA GTTGCCCAGCCGCCCGG CCC CCAGGCCGATGGGCACC AGGGGGGCGGCGAAG TERM 948 2243617 - 2243574 - R 100 -24.6 -4.03234 | gap 1, opp_overlap 2243570, overlap 2243575 2243577 GGCGCGGGACAGAAA GGACCCCCGTGCCCGGCGGCC CGG GGCCGC-GGGCACCGGGGTCA GCGCGCTGTAATCAG TERM 949 2243616 - 2243575 - R 100 -28.1 -3.01726 | gap 1, opp_overlap 2243570, overlap 2243574 2243577 GCGCGGGACAGAAAG GACCCCCGTGCCCGGCGGCC CGG GGCCGC-GGGCACCGGGGTC AGCGCGCTGTAATCA TERM 950 2243614 - 2243577 - R 100 -24.9 -3.06418 | gap 1, opp_overlap 2243570, overlap 2243575 2243574 GCGGGACAGAAAGGA CCCCCGTGCCCGGCGGCC CGG GGCCGC-GGGCACCGGGG TCAGCGCGCTGTAAT Hhal_2040 2244199 - 2243663 - | hypothetical protein Hhal_2041 2244996 - 2244274 - | hypothetical protein TERM 951 2244785 - 2244727 - G 100 -18.2 -3.96068 | gap 3, overlap 2244724 GTAGTTGAAGAAGAA GCTGTGCTCGGC-CACCGCCGGGCTCGCC ACCA GG-GCGCCCG-CGGTGAGCAGCGCACAGC CGCCGAGGATGCGTG Hhal_2042 2246000 - 2245149 - | nicotinate-nucleotide pyrophosphorylase Hhal_2043 2247316 - 2246108 - | protein of unknown function Met10 Hhal_2044 2247436 - 2248146 + | hypothetical protein Hhal_2045 2248151 - 2249320 + | acetylornithine deacetylase Hhal_2046 2249335 - 2250669 + | N-acetylglutamate synthase Hhal_2047 2250700 - 2251494 + | thymidylate synthase Hhal_2048 2251511 - 2252005 + | dihydrofolate reductase Hhal_2049 2252018 - 2252977 + | radical SAM domain-containing protein Hhal_2050 2253282 - 2254412 + | porin TERM 952 2254458 - 2254439 - T 84 -12.1 -4.02817 | opp_overlap 2254439 2254438 CCCGCACAACAAGAA GCCCCGG ATCCAA CCGGGGC CTTGCTTGACTCCAG TERM 953 2254473 - 2254490 + T 100 -14.1 -5.7946 | CCTTGCTTGACTCCA GGGCGCC TTCG GGCGCCC TTTTTTTGTTCAGGG Hhal_2051 2256519 - 2254519 - | hypothetical protein Hhal_2052 2256731 - 2256531 - | hypothetical protein Hhal_2053 2257337 - 2256744 - | hypothetical protein Hhal_2054 2258120 - 2257431 - | hypothetical protein rho 2259379 - 2258120 - | transcription termination factor Rho TERM 954 2258974 - 2258990 + g 70 -8.7 -3.9461 | TGAACAGCGGAGTGA GGTTCTC GAA GAGGACC TTGTTCTTGGCCGCC Hhal_2056 2259812 - 2259486 - | thioredoxin TERM 955 2260047 - 2259994 - R 73 -6 -4.33151 | gap 3, opp_overlap 2260039, overlap 2259996 TAGTAGAACGGAAAA TA-GCGGCCCTGGGCCGGCGTGTCAAC TGC GCTGGCACG-C-GCCGAGGGCCTCGCA GCAGCGCAGGCCGCG TERM 956 2260044 - 2259996 - R 80 -12.4 -3.76167 | gap 2, opp_overlap 2260039, overlap 2259994 GTAGAACGGAAAATA GCGGCCCTGGGCCGGCGTGTCAAC TGC GCTGGCACG-C-GCCGAGGGCCTC GCAGCAGCGCAGGCC Hhal_2057 2260398 - 2260015 - | hypothetical protein Hhal_2058 2261307 - 2260483 - | 3'(2'),5'-bisphosphate nucleotidase nudE 2261926 - 2261336 - | ADP-ribose diphosphatase NudE TERM 957 2261861 - 2261807 - G 73 -12.8 -3.53224 | overlap 2261808 GACGCCGTTGCCAAA GCGCAGCCCCACCGCCTCGAT-GCGG AACAG CCGCGAGCG-GGCGACGGTGCTGCGG TGGAGCGTCTCCGGG TERM 958 2261860 - 2261808 - G 74 -16.3 -2.71791 | overlap 2261807 ACGCCGTTGCCAAAG CGCAGCCCCACCGCCTCGAT-GCGG AACAG CCGCGAGCG-GGCGACGGTGCTGCG GTGGAGCGTCTCCGG Hhal_2060 2263128 - 2261956 - | acetate kinase Hhal_2061 2264461 - 2263145 - | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase Hhal_2062 2266233 - 2264476 - | poly-beta-hydroxybutyrate polymerase domain-containing protein TERM 959 2266132 - 2266106 - G 90 -12.2 -4.41047 | overlap 2266107 ACGGCCCAATCAAAA GTCGCCAGCGAC ACC GCCGCCGGCGAA AGCCCTTGCGTATAA TERM 960 2266131 - 2266107 - G 77 -15.7 -3.24146 | overlap 2266106 CGGCCCAATCAAAAG TCGCCAGCGAC ACC GCCGCCGGCGA AAGCCCTTGCGTATA Hhal_2063 2267853 - 2266372 - | hypothetical protein Hhal_2064 2269162 - 2267840 - | ThiS, thiamine-biosynthesis Hhal_2065 2270441 - 2269167 - | hypothetical protein Hhal_2066 2273066 - 2270559 - | hypothetical protein TERM 961 2270896 - 2270857 - G 74 -12.9 -3.54543 | gap 2, overlap 2270858 AGCGAGGCCTCGAAA CGCCGCTCGGCCGCCGCCG TGCG CAG-GGCGGC-GAGCAGCA CCACCACCCCGGCCA Hhal_2067 2273773 - 2273063 - | ABC transporter related Hhal_2068 2273789 - 2274442 + | arylesterase rdgC 2275540 - 2274632 - | recombination associated protein Hhal_2070 2276681 - 2275527 - | phosphoribosylaminoimidazole carboxylase, ATPase subunit Hhal_2071 2277169 - 2276678 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit Hhal_2072 2277452 - 2277216 - | hypothetical protein Hhal_2073 2279342 - 2277537 - | poly(R)-hydroxyalkanoic acid synthase, class I TERM 962 2279493 - 2279440 - g 77 -17.3 -2.57244 | gap 1, overlap 2279436 CGATGCATCAACCGA TCCGGGCCTG-TGCGGGGTGGTCGCC GTC GGCGACCACCCCGCCGCAGCCGCCGC CTGGGCCGAGCAGCT Hhal_2074 2279405 - 2280208 + | hypothetical protein Hhal_2075 2280783 - 2280205 - | hypothetical protein TERM 963 2280851 - 2280891 + r 100 -22 -2.90763 | gap 1, opp_overlap 2280855, overlap 2280855 TACGAGATCCCAACG CAAACCGCCAGCG-ACGCC CGGG GGCGTGCGCTGGCGGTCTG TGTCTGCGGTGTAGA TERM 964 2280855 - 2280887 + r 100 -21.4 -3.05498 | gap 1, opp_overlap 2280855, overlap 2280851 AGATCCCAACGCAAA CCGCCAGCG-ACGCC CGGG GGCGTGCGCTGGCGG TCTGTGTCTGCGGTG TERM 965 2280887 - 2280855 - R 100 -21.4 -3.76393 | gap 1, opp_overlap 2280851 2280855 AGATCCCAACGCAAA CCGCCAGCG-ACGCC CGGG GGCGTGCGCTGGCGG TCTGTGTCTGCGGTG Hhal_2076 2281394 - 2281002 - | ribosomal protein S9 rplM 2281849 - 2281421 - | 50S ribosomal protein L13 Hhal_2078 2282815 - 2281937 - | S-adenosylmethionine decarboxylase Hhal_2079 2283729 - 2282911 - | indole-3-glycerol-phosphate synthase Hhal_2080 2284754 - 2283726 - | anthranilate phosphoribosyltransferase Hhal_2081 2285399 - 2284806 - | glutamine amidotransferase of anthranilate synthase Hhal_2082 2286871 - 2285396 - | anthranilate synthase component I Hhal_2083 2287556 - 2286876 - | phosphoglycolate phosphatase lpxC 2288527 - 2287625 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 966 2287681 - 2287730 + g 71 -10.8 -3.62046 | opp_overlap 2287680, overlap 2287682 CCAGCTCCTCAAAGG TCACCTCCT-CCCAGGCGTGCTCG TGCT CGAGCA-GCTTGCGCAGGAGGCGG TTATTGAGGGCGTGC TERM 967 2288677 - 2288658 - R 76 -2.2 -4.86939 | gap 1, overlap 2288661 2288663 TAACAAATCCAAAAA GTATATTGC AGC GCAACA-AC GGCGCTGCCGCTCAG Hhal_2085 2289849 - 2288689 - | cell division protein FtsZ Hhal_2086 2291136 - 2289898 - | cell division protein FtsA Hhal_2087 2291941 - 2291150 - | cell division protein FtsQ Hhal_2088 2292852 - 2291938 - | D-alanine--D-alanine ligase murB 2293754 - 2292849 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 968 2293534 - 2293520 - G 73 -7.8 -4.18018 | CGCCCTGACTCAAAA TGACCG TCC CGGCCA CACCGCCGTCGCGCA Hhal_2090 2295211 - 2293751 - | UDP-N-acetylmuramate--alanine ligase Hhal_2091 2296280 - 2295204 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Hhal_2092 2297464 - 2296277 - | cell division protein FtsW Hhal_2093 2298800 - 2297457 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase Hhal_2094 2299882 - 2298800 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Hhal_2095 2301235 - 2299883 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 969 2300067 - 2300037 - G 73 -7.4 -4.11692 | overlap 2300039 2300040 GATGCATTGTCAAAA CAGCGGCCGCCTTC GCC GAAGGCCTCGGCCG CCGGGGCGGCAGCCT TERM 970 2300291 - 2300349 + g 74 -16.7 -2.70932 | opp_overlap 2300279 CCAGCCGCCGTGATC TCCGCGA-CGCAGCTCCAGCCGCCCCGGT ACG GCCGCGGCGGA-GGAGATGCGGTCGAGGA TGGTTCGCGCCGGCA Hhal_2096 2302734 - 2301223 - | UDP-N-acetylmuramyl-tripeptide synthetases Hhal_2097 2304458 - 2302731 - | peptidoglycan glycosyltransferase Hhal_2098 2304741 - 2304469 - | cell division protein FtsL Hhal_2099 2305712 - 2304738 - | S-adenosyl-methyltransferase MraW Hhal_2100 2306190 - 2305732 - | MraZ protein TERM 971 2306659 - 2306641 - R 72 -8.8 -4.1466 | overlap 2306653 AGGTAAGGGTGAAAA GGTGCGGT AAG AGCGCACC GCGCGACCGGCAACG Hhal_2101 2307750 - 2306827 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 972 2307593 - 2307548 - G 71 -10.4 -3.78022 | opp_overlap 2307578 TGCAGACTCAGCAAA CGCGCCCGA-AGACCGTACTGC TCCA GCAGC-CGGCCGGTCCGGCGCG TATCCTCAGCCGCCA Hhal_2102 2307771 - 2309666 + | LppC family lipoprotein TERM 973 2309904 - 2309933 + GF 71 -9.1 -3.727 | CCGTGCCGCCAGCGC CTGGCTGGCCCGG CACC CCGGGTGGGCCCG TTTCGATGTAGTCGC Hhal_2103 2309638 - 2310003 + | hypothetical protein Hhal_2104 2310033 - 2310629 + | phosphoheptose isomerase Hhal_2105 2311079 - 2310651 - | ClpXP protease specificity-enhancing factor Hhal_2106 2311696 - 2311097 - | glutathione S-transferase domain-containing protein Hhal_2107 2312484 - 2311756 - | cytochrome c1 Hhal_2108 2313724 - 2312492 - | cytochrome b/b6 domain-containing protein Hhal_2109 2314761 - 2314003 - | hypothetical protein TERM 974 2315014 - 2314996 - g 76 -8.1 -4.36914 | overlap 2315000 CCCGGGGCGACAAAA CGACGCA GCCGA TGCGCCG CCTCGACGGGAACCG Hhal_2110 2314790 - 2316043 + | peptidase S1 and S6, chymotrypsin/Hap TERM 975 2316105 - 2316051 - T 70 -11.3 -3.41878 | overlap 2316052 GGCGCTAATCGACAA CGCCCCGGCCAGACTG-GCCGGCGCTG GGG CAGCCGCGGCTCAGGCCG-CCACGGCG AGGGTCTCGGCCAGC TERM 976 2316074 - 2316052 - T 74 -14.8 -2.64912 | overlap 2316051 GCGCTAATCGACAAC GCCCCGGCCA GAC TGGCCGGCGC TGGGGCAGCCGCGGC Hhal_2111 2317187 - 2316090 - | histidinol-phosphate aminotransferase Hhal_2112 2318499 - 2317180 - | histidinol dehydrogenase Hhal_2113 2319164 - 2318520 - | ATP phosphoribosyltransferase Hhal_2114 2320443 - 2319187 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Hhal_2115 2320699 - 2320448 - | BolA family protein Hhal_2116 2321076 - 2320762 - | anti-sigma-factor antagonist Hhal_2117 2321693 - 2321073 - | toluene tolerance family protein Hhal_2118 2322178 - 2321723 - | hypothetical protein Hhal_2119 2322967 - 2322191 - | hypothetical protein Hhal_2120 2323788 - 2322964 - | ABC transporter related TERM 977 2324809 - 2324777 - g 86 -13.4 -3.89346 | gap 1 CCCCGAGCCCACAAA CCGCCTCGCCGGACC TGTT GG-CCGCCGAGGCAG CCGAGCGCATGGAGC Hhal_2121 2323900 - 2324919 + | KpsF/GutQ family protein Hhal_2122 2324916 - 2325479 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Hhal_2123 2325483 - 2326046 + | hypothetical protein TERM 978 2326055 - 2326072 + G 74 -12.7 -3.61398 | opp_overlap 2326052 GCATTGAGACCACGG GCCGCAC CCGG GTGCGGC TTCTTGGCGCCGCGC Hhal_2124 2326033 - 2326560 + | OstA family protein Hhal_2125 2326564 - 2327289 + | ABC transporter related Hhal_2126 2327270 - 2328796 + | RNA polymerase, sigma 54 subunit, RpoN TERM 979 2329135 - 2329115 - g 72 -8.2 -3.99432 | overlap 2329116 GAAACACAAAGAGAA GGCCGTCG ATCAG CGACGGCA GGGCGCGTCCCTCAA Hhal_2127 2328837 - 2329163 + | sigma 54 modulation protein/ribosomal protein S30EA Hhal_2128 2329208 - 2329678 + | putative PTS IIA-like nitrogen-regulatory protein PtsN Hhal_2129 2329675 - 2330196 + | HPr kinase Hhal_2130 2330193 - 2331056 + | hypothetical protein Hhal_2131 2331053 - 2331457 + | PTS system fructose subfamily IIA component Hhal_2132 2331454 - 2331729 + | phosphotransferase system, phosphocarrier protein HPr TERM 980 2331727 - 2331763 + T 87 -18 -2.78384 | overlap 2331718 GAGACCGAGCACGGC TGATCGCCGCCGGGCG CTTAC TGCCCGGCGACGGTCA TCTCCTCGACCAGGA Hhal_2133 2333090 - 2331744 - | peptidase U62, modulator of DNA gyrase Hhal_2134 2334615 - 2333143 - | peptidase U62, modulator of DNA gyrase TERM 981 2334298 - 2334250 - G 74 -14.5 -3.05384 | GCCCCCCGCACGGAA GGCGGCCAG-GCTGCGGCTCTGC CCGCT GC-GCGCCACCGCGCCGGCCGCC GAGGAGGCATCGAGC Hhal_2135 2335484 - 2334624 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Hhal_2136 2338893 - 2335468 - | hypothetical protein TERM 982 2335627 - 2335594 - G 77 -10.9 -3.85698 | gap 1, overlap 2335580 TTGGTCGGCCAGAAA GCCGC-CGGCGGCACC CAC GCCGCCACCGAGCAGC GCCCCAAGCAGCGGC TERM 983 2336115 - 2336066 - G 74 -15.5 -3.08073 | AGCAGCCCGAACAGA TCCCCCGCATCGCCGCTGCGCAG CCGC CCGCGCAGCGCCGTACCGGTGGA GCGCCACTCCCCGCT Hhal_2137 2340351 - 2338903 - | ribonuclease Hhal_2138 2340939 - 2340358 - | maf protein TERM 984 2340752 - 2340781 + g 74 -13.5 -3.28924 | gap 1, overlap 2340753 AGCGCCGGCGCCTGC TGCTCGGCGGCGGC GTA GCCGC-GCCGGGCC TTCTCCAGGGCCATG TERM 985 2340753 - 2340780 + g 77 -17 -2.57211 | gap 1, overlap 2340752 GCGCCGGCGCCTGCT GCTCGGCGGCGGC GTA GCCGC-GCCGGGC CTTCTCCAGGGCCAT Hhal_2139 2341428 - 2340964 - | hypothetical protein TERM 986 2341373 - 2341395 + g 86 -14.1 -3.90318 | GCGTAGGTCTCGTGA CCGTCGCGC ACCCA GCGCGGCGG TTTGTGGCCTACTGC Hhal_2140 2341757 - 2341404 - | iojap-like protein Hhal_2141 2342423 - 2341767 - | nicotinate (nicotinamide) nucleotide adenylyltransferase Hhal_2142 2343717 - 2342443 - | gamma-glutamyl phosphate reductase Hhal_2143 2344771 - 2343767 - | DNA polymerase III, delta subunit Hhal_2144 2345292 - 2344771 - | rare lipoprotein B Hhal_2145 2347779 - 2345326 - | leucyl-tRNA synthetase Hhal_2146 2347977 - 2348513 + | hypothetical protein Hhal_2147 2349256 - 2348843 - | GreA/GreB family elongation factor Hhal_2148 2350001 - 2349537 - | hypothetical protein TERM 987 2350073 - 2350088 + H 93 -4.6 -5.24531 | opp_overlap 2350075, overlap 2350075 CGCATTGCTGCCAAG GAGGTG GCCC CACCCC TTTTTTATGCGCGAT Hhal_2149 2350265 - 2352307 + | multi-sensor hybrid histidine kinase TERM 988 2356473 - 2356451 - g 71 -11.2 -3.62046 | GCAGGTGGTGAACAA CGGCGCCGAG GCC CTCGAGGCCG CCCATGAAGCACCGC TERM 989 2357130 - 2357088 - g 72 -13.2 -3.15861 | CAGGAGGCCGAGCAA GCCCTGGAGCCGCTGCTCCC CGC GGCAGCAGCGGCGCCCTCGC CCGGCTCGCCGACCG Hhal_2150 2352393 - 2357324 + | multi-sensor hybrid histidine kinase Hhal_2151 2360192 - 2357301 - | Hpt sensor hybrid histidine kinase Hhal_2152 2360460 - 2362130 + | putative ABC transporter ATP-binding protein TERM 990 2362185 - 2362140 - T 85 -16.8 -3.04144 | gap 1 GGCTGAGGCGCAACA CGCTGCCTCGCTGGCGGCGGC TGCGC GCCGCCGCCAGCGGCTCAG-G CACAGGGGCTCGGCT Hhal_2153 2363498 - 2362230 - | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 991 2363742 - 2363761 + H 74 -10.6 -3.80094 | opp_overlap 2363720 2363723 CCCATCCCCGCGCCG GGCCGCGC AGGT GCGCGCCC TTCTCTTCGTTTCCC TERM 992 2367329 - 2367310 - g 76 -7.8 -4.24948 | CGACCACACCGAAAA GGATCGCC TGTG GGAGATCC TCAACGTCGAGGAGA metH 2363867 - 2367553 + | B12-dependent methionine synthase TERM 993 2367573 - 2367608 + T 100 -19.7 -3.48395 | opp_overlap 2367574, overlap 2367574 GACCCACCGCTAGGA ATCCCCTCGCCCGGC GCCGCG GCCGGGCGAGGGGGG TTCTATACCCGGCGT TERM 994 2367607 - 2367574 - T 100 -21 -3.15663 | opp_overlap 2367573 2367574 ACCCACCGCTAGGAA TCCCCTCGCCCGGC GCCGCG GCCGGGCGAGGGGG GTTCTATACCCGGCG TERM 995 2367574 - 2367607 + T 100 -23.2 -2.68823 | opp_overlap 2367574, overlap 2367573 ACCCACCGCTAGGAA TCCCCTCGCCCGGC GCCGCG GCCGGGCGAGGGGG GTTCTATACCCGGCG Hhal_2155 2368227 - 2367625 - | superoxide dismutase Hhal_2156 2369067 - 2368321 - | rhodanese domain-containing protein Hhal_2157 2370815 - 2369082 - | response regulator receiver protein Hhal_2158 2371163 - 2370858 - | anti-sigma-factor antagonist TERM 996 2371126 - 2371105 - G 82 -4.4 -5.09426 | overlap 2371121 CTGAAGTCGAAAAAA CCCTGG ATTGACATCA CCAGGG TCTGGCCGTCGTTCT TERM 997 2371238 - 2371215 - R 81 -16 -3.03441 | GATTACGCTCGAATA CCGGCGGCAG GCCA CTGCCGCCGA CGCGCCCCGCCCCAA Hhal_2159 2372525 - 2371281 - | methyl-accepting chemotaxis sensory transducer TERM 998 2371854 - 2371831 - G 71 -11.7 -3.58343 | gap 1 GCCACCACCGCGAAA CCGCGGCCGG ACTCA CCGG-CGCGG GCCGCCTCGATGCTG TERM 999 2372085 - 2372031 - G 80 -15.9 -3.14564 | gap 2, opp_overlap 2372051 GTAGTTGTTCAGGAA GGATTCGGTCTCGTGGACGAACTCGGC GAT GCCGAACTGTTCCACG-G-CCGAATCC CCGCCGGTCTGCTCG Hhal_2160 2373577 - 2372528 - | chemotaxis-specific methylesterase Hhal_2161 2374242 - 2373592 - | chemoreceptor glutamine deamidase CheD TERM 1000 2373648 - 2373691 + g 83 -15.5 -3.61398 | gap 3 TCTCGTGGAGGTAGT GCTCCT-CGCG-GCGC-ACGAC GGT GTCGTTGCGCGTGCGCAGGAGC TTCTTCGACCGCGCC Hhal_2162 2375066 - 2374248 - | protein-glutamate O-methyltransferase Hhal_2163 2376952 - 2375120 - | methyl-accepting chemotaxis sensory transducer TERM 1001 2375890 - 2375930 + g 74 -16.8 -2.73364 | gap 1, overlap 2375907 CCTGACCGGAGATCT GCTGGCCGCGCTCGGCCCG CTCG CGGGCCGC-CGTGGCGAGC TGATTCGACTCGCGG TERM 1002 2376915 - 2376932 + g 72 -14.1 -3.13299 | overlap 2376914 TCTTCGTCCGTCTGC GCCGCCG AGGC CGGCGGC TGTTCCGTGTCGTCC Hhal_2164 2377811 - 2377029 - | cobyrinic acid a,c-diamide synthase Hhal_2165 2379220 - 2377808 - | methyl-accepting chemotaxis sensory transducer TERM 1003 2378618 - 2378595 - G 77 -11.7 -3.95153 | gap 1, opp_overlap 2378607, overlap 2378596 GCAACTACCGAGAAA CCGGCGCCGG CCTGC CCGGC-CCGG GCCGCCTCCACCGAG Hhal_2166 2379830 - 2379213 - | putative CheW protein Hhal_2167 2381987 - 2379876 - | CheA signal transduction histidine kinases TERM 1004 2381520 - 2381487 - G 82 -18.9 -2.85784 | gap 1, overlap 2381456 2381484 GAAGCGAATCAACCA GCCGCCGCCGCCGC CTCCCCC GCGG-GGCGGCGGC GCATCGTCACCGCCG Hhal_2168 2382387 - 2382025 - | response regulator receiver protein Hhal_2169 2382707 - 2382414 - | hypothetical protein Hhal_2170 2383178 - 2382825 - | Hpt protein Hhal_2171 2383773 - 2383210 - | isochorismatase hydrolase TERM 1005 2383277 - 2383252 - G 78 -14 -3.65522 | CAGGCACGGCAACAA GCGCCGGAAC GTTTCG GTCCCGGCGC GCTGGAGCCACTCGA Hhal_2172 2384303 - 2383770 - | outer membrane lipoprotein Slp Hhal_2173 2384872 - 2384303 - | Slp family outer membrane lipoprotein TERM 1006 2384949 - 2384917 - R 100 -19.1 -4.08706 | CCCTCAGTATACAAA GCCGCTAGCCGGCGG CCA CCGCCCGCCAGCGAC GCACCCACCGCGGCA Hhal_2174 2385841 - 2384921 - | ABC-3 protein Hhal_2175 2386605 - 2385841 - | ABC transporter related Hhal_2176 2387634 - 2386672 - | periplasmic solute binding protein TERM 1007 2387014 - 2387031 + g 83 -9.1 -4.59109 | CAGGAAGCGCTGCGC CTCGGGG ACTG CCTCGAG TTTTTCGCCGATCTG Hhal_2177 2389451 - 2387835 - | glucose-6-phosphate isomerase Hhal_2178 2390878 - 2389535 - | UDP-glucose 6-dehydrogenase TERM 1008 2390495 - 2390522 + g 74 -13.4 -3.28712 | CGCGGCGCGCACCCG GTCCGCGGTGCC CACG GGCACGGTGGAC TTATCGACGACCACC Hhal_2179 2391919 - 2390909 - | NAD-dependent epimerase/dehydratase TERM 1009 2391903 - 2391891 - G 71 -10.5 -3.73775 | opp_overlap 2391900 TGCATGCCGATGAAA CCGGC CAC GCCGG TGACGAGGATTCGCA Hhal_2180 2392624 - 2392007 - | methyltransferase type 12 Hhal_2181 2393168 - 2392707 - | hypothetical protein TERM 1010 2393568 - 2393554 - g 70 -4.2 -4.51812 | opp_overlap 2393554 2393554, overlap 2393550 GGCGAGAAGAAGAAA GGGG TGTGGAT CCCC TTCTCGGTGACCTTC Hhal_2182 2393353 - 2393871 + | hypothetical protein Hhal_2183 2396738 - 2393901 - | excinuclease ABC, A subunit TERM 1011 2394579 - 2394556 - G 72 -8.8 -4.05714 | gap 1 ACGTTGAAGGAGAAA CGCCC-CGGCT TGT AGCCCCGGGCG CGCGCCTCGGGCGTG TERM 1012 2396135 - 2396121 - G 71 -11.4 -3.59979 | opp_overlap 2396115 GTCGCGGACCCGAAA GCGGTC GAT GACCGC CTCGATATCGTGGGC TERM 1013 2396824 - 2396846 + H 80 -12 -3.75153 | overlap 2396800 GGCGCTGCTGCGGCC GGTTTCGCCG GAC CGGCAAAACC TTTACATTGAGGCCA Hhal_2184 2396962 - 2397444 + | single-strand binding protein TERM 1014 2397477 - 2397507 + T 100 -19.7 -3.62096 | CAGCCGATCGACCCA CCCCGAGGCCCGC CCAGT GCGGGCCTCGGAG TTTCGGGTGCTCCCA TERM 1015 2397557 - 2397602 + T 72 -13.1 -3.13403 | gap 1, opp_overlap 2397547, overlap 2397556 AATCAGGCCGGACTC GGCAGCGCCTCCTGCGC-CGGC AAG GCCGTGTGCCGCAGGCGCAGGC TGTTGGTGACCACCA Hhal_2185 2399808 - 2397544 - | heavy metal translocating P-type ATPase TERM 1016 2398301 - 2398258 - G 75 -16.6 -2.87344 | gap 1 CAGGGTCTCCATATA GCG-CCGGGCGCCGATGGCCA CGT CGGCCCCCGCCACCCGGCCGC GGATGCCGAAGCCGG Hhal_2186 2400052 - 2399840 - | heavy metal transport/detoxification protein Hhal_2187 2400929 - 2400027 - | Ion transport protein TERM 1017 2400675 - 2400658 - GH 89 -12.7 -4.15044 | GGCCCTCGGAAGAAA CGTGGCC CCCA GGCCACG ACCCGCAGCGCGATC Hhal_2188 2401013 - 2401483 + | heat shock protein Hsp20 TERM 1018 2401507 - 2401525 + F 100 -17.4 -5.28176 | opp_overlap 2401500 2401497 ATCAACGACCCACCC GCCGCGGC CTC GCCGCGGC TTTTTTGTGGCTACA Hhal_2189 2401603 - 2401977 + | hypothetical protein Hhal_2190 2402437 - 2401991 - | UspA domain-containing protein Hhal_2191 2402533 - 2404305 + | carbon starvation protein CstA Hhal_2192 2404302 - 2404580 + | hypothetical protein Hhal_2193 2404608 - 2405543 + | arsenite-activated ATPase ArsA TERM 1019 2405720 - 2405672 - T 78 -7.3 -4.36914 | gap 1, overlap 2405673 GCCGCTCGGACAAAA CCTCGCTGAC-CAGCGCGAACC GGTCAA GGTTCGCGCTGGGCCCCCGCGC CGGCTGCGCGGCTCG Hhal_2194 2406772 - 2405783 - | alcohol dehydrogenase Hhal_2195 2407696 - 2406803 - | UTP-glucose-1-phosphate uridylyltransferase GalU Hhal_2196 2411689 - 2407790 - | phosphoribosylformylglycinamidine synthase TERM 1020 2409169 - 2409207 + g 75 -16.2 -2.83012 | CCGAGCCGCCCAGCC G-GTGCTGGTCGCCGCTG AGCTC CAG-GGCGACCAGCACGC TGTCGTCCTGCGGTT TERM 1021 2411484 - 2411434 - G 73 -9.7 -3.93695 | TCGACCAGGGAGAAA CGGTGCCGGGCCGAGG-CACCAC CAAGAGC GTGGTGACCTCG-CCCTCCGCCG CGGACGGCGCCGGGT Hhal_2197 2412291 - 2411692 - | hypothetical protein Hhal_2198 2413190 - 2412288 - | dihydrodipicolinate synthase Hhal_2199 2413334 - 2413861 + | amino acid-binding ACT domain-containing protein TERM 1022 2414314 - 2414295 - g 74 -13.6 -3.32647 | CTCCAAGGACATCAA CCTGCGCA TCCG TGCGCAGG TGGCCGGCATTGCCG Hhal_2200 2413906 - 2415240 + | PhoH family protein Hhal_2201 2416375 - 2415278 - | hypothetical protein Hhal_2202 2416478 - 2417938 + | peptidase M48, Ste24p Hhal_2203 2417991 - 2418779 + | hypothetical protein Hhal_2204 2418779 - 2419819 + | alpha/beta hydrolase fold TERM 1023 2419947 - 2419931 - T 100 -13.7 -5.75342 | CGCGCCCAAAAAAAA CCCCCTC AGA GAGGGGG CAAGGAGTTGGCGAC TERM 1024 2420028 - 2420012 - T 72 -2.9 -4.63932 | GACCGGCTAACAAAA TCCTAGC TCC GTCAGGA GCCTTCCGCCGCAGA TERM 1025 2420170 - 2420135 - T 93 -17.7 -3.35597 | gap 2, overlap 2420133 TTGACCTGTCAAATA CGGGTCCGCCCG--GCA TCGA TGCAACGGGCGGACCCG GGCAGCTCAGAAGCT Hhal_2205 2420923 - 2420177 - | acetoacetyl-CoA reductase TERM 1026 2420962 - 2420994 + r 100 -14.2 -4.42386 | gap 2, overlap 2420979 ACTCGACTTGCACCC GTGG-GCGCT-CGGCC CCC GGCCGCGGCGCACCAC TTTTGTGCATCGCAG Hhal_2206 2421767 - 2421237 - | polyhydroxyalkonate synthesis repressor, PhaR TERM 1027 2421300 - 2421321 + g 77 -3.6 -4.71426 | overlap 2421287 2421302 GCCCCGGCTGGAGGC GGGCGGGT CTTCAA ACCCGCTG TTTTCTTCGTCGCGG TERM 1028 2421302 - 2421319 + g 72 -8.4 -3.97413 | overlap 2421287 2421300 CCCGGCTGGAGGCGG GCGGGT CTTCAA ACCCGC TGTTTTCTTCGTCGC Hhal_2207 2421906 - 2422751 + | putative signal transduction protein Hhal_2208 2424120 - 2422735 - | para-aminobenzoate synthase, subunit I TERM 1029 2424189 - 2424173 - H 100 -3.6 -5.71983 | GCAACGATAAAAAAA CCTACG GTCGA CGGAGG AGAATCATGACCGAC TERM 1030 2424459 - 2424511 + G 74 -13.5 -3.35046 | gap 3, overlap 2424457 GGCCGGGATCCGCCC CGGCGACCGGGT-GG-CGGTGCAGAT GCCC AAC-GCCCTGCCCTACCCGGTCGCCG TCTTTGGCACGCTGC Hhal_2209 2424196 - 2425929 + | AMP-dependent synthetase and ligase Hhal_2210 2426010 - 2426753 + | hypothetical protein Hhal_2211 2426757 - 2427260 + | crossover junction endodeoxyribonuclease RuvC TERM 1031 2427780 - 2427766 - g 70 -12.8 -3.28712 | CGCCCTGGGCTACAA GCCGCC CGA GGCGGC GCGCATGGCCCGCAA Hhal_2212 2427257 - 2427871 + | Holliday junction DNA helicase RuvA ruvB 2427874 - 2428914 + | Holliday junction DNA helicase B Hhal_2214 2429027 - 2429725 + | MotA/TolQ/ExbB proton channel Hhal_2215 2429737 - 2430201 + | biopolymer transport protein ExbD/TolR TERM 1032 2430246 - 2430273 + G 70 -3.3 -4.52047 | gap 1 GAGCCCCGAAGCTGC CGAGCCGG-CTG GCGAG CAGTCCGTCGCG TTTTGTGATCTACTC Hhal_2216 2430212 - 2431162 + | TonB domain-containing protein Hhal_2217 2431166 - 2432476 + | TolB domain-containing protein Hhal_2218 2432500 - 2433126 + | OmpA/MotB domain-containing protein Hhal_2219 2433126 - 2433884 + | tetratricopeptide domain-containing protein Hhal_2220 2435148 - 2434264 - | hypothetical protein Hhal_2221 2435635 - 2435261 - | hypothetical protein TERM 1033 2435577 - 2435607 + g 75 -5.2 -4.62471 | opp_overlap 2435550 GGGTCTTCCTCGCCC CCGCGCACCAAGCG GAC CGCATCGTTGGCGG TTTTTAGCGGTTGCG Hhal_2222 2437103 - 2435811 - | hydroxylamine reductase Hhal_2223 2437684 - 2437229 - | BadM/Rrf2 family transcriptional regulator Hhal_2224 2438264 - 2437761 - | hypothetical protein TERM 1034 2439237 - 2439248 + G 73 -7.2 -4.18934 | opp_overlap 2439214, overlap 2439230 CGCTTCCTGCCGGAG GGCC CCCA GGCC TTTCTTCCCCTGGTG Hhal_2225 2438592 - 2439797 + | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase aspS 2441669 - 2439816 - | aspartyl-tRNA synthetase TERM 1035 2441331 - 2441349 + g 73 -7.4 -4.1899 | CAGGACCTCGACCCG CCCGGA GTGCAGA TCCGGG TTTTCGGTACCCTCC Hhal_2227 2441979 - 2441698 - | KaiB domain-containing protein Hhal_2228 2443430 - 2441976 - | putative circadian clock protein, KaiC Hhal_2229 2443846 - 2443505 - | FmdB family regulatory protein Hhal_2230 2444560 - 2443928 - | hypothetical protein Hhal_2231 2444646 - 2445518 + | short-chain dehydrogenase/reductase SDR TERM 1036 2445558 - 2445529 - T 100 -23.7 -2.64794 | GCTAATCCGACACGA CTGTGCCCGGAGG GCCT CCTCCGGGCACAG TCCGGCACCGCTCGG Hhal_2232 2448212 - 2445600 - | ATPase TERM 1037 2446877 - 2446911 + g 72 -4.1 -4.56736 | gap 1, overlap 2446889 CGCTGATCTCATCCT CGAGGGTCGCCAGCCG CTTC CGGGAGGCG-TCGTCG TTTTCGTTCTTGAGT Hhal_2233 2449602 - 2448316 - | response regulator receiver modulated diguanylate cyclase Hhal_2234 2450348 - 2449605 - | hypothetical protein Hhal_2235 2451282 - 2450341 - | RluA family pseudouridine synthase Hhal_2236 2451351 - 2452112 + | putative lipoprotein Hhal_2237 2452474 - 2452136 - | nitrogen regulatory protein P-II Hhal_2238 2454173 - 2452557 - | NAD+ synthetase Hhal_2239 2455054 - 2454182 - | succinyl-CoA synthetase, alpha subunit Hhal_2240 2456255 - 2455080 - | succinyl-CoA synthetase, beta subunit Hhal_2241 2456414 - 2456683 + | hypothetical protein TERM 1038 2456721 - 2456687 - T 93 -15.6 -3.85698 | CGCCCCCGGTAGAAA GGCGCGCCGGGGCGTC CCA GAGCCCCCGGCACACC CCACCAAGCGCGACC Hhal_2242 2457230 - 2456775 - | fimbrial protein pilin Hhal_2243 2457384 - 2458004 + | hypothetical protein Hhal_2244 2458450 - 2457965 - | transposase TERM 1039 2460584 - 2460572 - g 76 -7.7 -4.37658 | AAGGGGTGGAGAAAA TCCAG GAT CTGGA ACCGGGCATGGTCCT TERM 1040 2460954 - 2460942 - g 72 -4.7 -4.39133 | CAAGAAGCAGGAAAA GGCCG AAC CCGCC ACCGCCACAGCGCTG Hhal_2245 2458603 - 2460999 + | RNA-binding S1 domain-containing protein Hhal_2246 2466766 - 2461076 - | excinuclease ABC, A subunit TERM 1041 2466822 - 2466787 - R 87 -14.6 -3.58726 | overlap 2466789 GGCTTCCAGAGACAA GACGGCGCCGACAGCC CGGG GGCTGCCGACGCCGGT ACGGTTCACGGGATG TERM 1042 2466820 - 2466789 - R 100 -21.6 -3.37198 | overlap 2466787 CTTCCAGAGACAAGA CGGCGCCGACAGCC CGGG GGCTGCCGACGCCG GTACGGTTCACGGGA Hhal_2247 2469038 - 2466855 - | malate synthase G Hhal_2248 2469874 - 2469131 - | hypothetical protein Hhal_2249 2470383 - 2470009 - | hypothetical protein Hhal_2250 2470702 - 2470965 + | ribosomal protein L31 Hhal_2251 2471020 - 2472324 + | citrate synthase I Hhal_2252 2473045 - 2472416 - | hypothetical protein Hhal_2253 2475495 - 2473084 - | 1A family penicillin-binding protein Hhal_2254 2475590 - 2477029 + | hypothetical protein Hhal_2255 2477026 - 2478144 + | type II and III secretion system protein Hhal_2256 2478141 - 2479304 + | putative deoxyguanosinetriphosphate triphosphohydrolase Hhal_2257 2480365 - 2479301 - | 3-dehydroquinate synthase Hhal_2258 2480950 - 2480417 - | shikimate kinase TERM 1043 2481100 - 2481155 + G 86 -13.9 -3.91911 | gap 3, overlap 2481102 TTCGAGCCGGACGCC CTGGCGC-GTTCCGGCCGCATCGCCGGG CGG CCGGGCG--GCGGCCGCGGCAGCGCCTG TTTCCTTCAGGTCGG TERM 1044 2481102 - 2481153 + G 83 -15.1 -3.5486 | gap 3, overlap 2481100 CGAGCCGGACGCCCT GGCGC-GTTCCGGCCGCATCGCCGGG CGG CCGGGCG--GCGGCCGCGGCAGCGCC TGTTTCCTTCAGGTC TERM 1045 2481323 - 2481360 + G 82 -17.6 -3.01712 | AGGGCTTCCCGGTGC CCGCCCCCCTGGCCGC CCGCGT GCGGCCGGCGGGGCCG TGTTACCGCGCCGAG Hhal_2259 2481004 - 2481738 + | 3-deoxy-D-manno-octulosonic-acid kinase Hhal_2260 2481741 - 2482835 + | glycosyl transferase family protein Hhal_2261 2484265 - 2482832 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase Hhal_2262 2484408 - 2484842 + | hypothetical protein Hhal_2263 2485766 - 2484861 - | hypothetical protein Hhal_2264 2485768 - 2486022 + | hypothetical protein Hhal_2265 2486063 - 2486590 + | NusG antitermination factor Hhal_2266 2487401 - 2486595 - | hypothetical protein Hhal_2267 2489671 - 2487434 - | primosome assembly protein PriA Hhal_2268 2489688 - 2490272 + | heat shock protein DnaJ domain-containing protein Hhal_2269 2491740 - 2490301 - | sodium/glutamate symporter Hhal_2270 2492777 - 2491815 - | alpha-L-glutamate ligase-like protein TERM 1046 2492467 - 2492457 - G 70 -8.2 -3.85698 | overlap 2492458 GCCGCTGGTGAGAAA GCGG TCA CCGC GGCGGCCGGTCACCA Hhal_2271 2494291 - 2492774 - | hypothetical protein Hhal_2272 2495266 - 2494340 - | hypothetical protein TERM 1047 2495248 - 2495220 - G 80 -18.1 -2.83164 | GCAGTGAGCAGCAGA CCACCCGCCGCCA GGA TGGCGGCGCGCGG CGAATTCATCACGGC Hhal_2273 2495814 - 2495257 - | hypothetical protein Hhal_2274 2497243 - 2495849 - | NAD(P) transhydrogenase, beta subunit Hhal_2275 2497545 - 2497246 - | pyridine nucleotide transhydrogenase subunit alpha Hhal_2276 2498681 - 2497542 - | NAD(P) transhydrogenase subunit alpha Hhal_2277 2498946 - 2499530 + | HNH endonuclease Hhal_2278 2501993 - 2499555 - | hypothetical protein Hhal_2279 2502105 - 2502995 + | fructosamine kinase Hhal_2280 2504095 - 2503016 - | squalene/phytoene synthase TERM 1048 2503117 - 2503152 + gT 82 -15.6 -3.07043 | gap 1 CGGCGGCGTAGTTGG TCAGTC-CCGCCAGG CGGCGGA CCTGGCGGCGACTGA TCTTCACCTCGTCGC Hhal_2281 2505077 - 2504070 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 1049 2504151 - 2504136 - GR 81 -11.8 -3.85698 | TCCGTGCTCGAGAAA GGCCGC CCGC GCGGCC TCGGTCATCGGTGGC TERM 1050 2504651 - 2504637 - GR 77 -12.8 -3.35679 | GCTGGCCAGGGAGAA GGCGCG CCG CGCGCC GTCGCCGAGCAGGAT Hhal_2282 2506580 - 2505114 - | UbiD family decarboxylase Hhal_2283 2507380 - 2506577 - | exodeoxyribonuclease III Xth Hhal_2284 2507513 - 2508553 + | aldo/keto reductase Hhal_2286 2508771 - 2509154 + | hypothetical protein Hhal_2287 2509171 - 2510865 + | TrkA domain-containing protein Hhal_2288 2510862 - 2512268 + | major facilitator transporter Hhal_2289 2512336 - 2513298 + | thioredoxin reductase TERM 1051 2513373 - 2513363 - f 72 -8.2 -4.08216 | GGACCGCGGCCAAAA GCCG AAC CGGC CACGCGCCGCCGAAA Hhal_2290 2513410 - 2515179 + | isocitrate dehydrogenase, NADP-dependent TERM 1052 2515287 - 2515324 + G 91 -21.3 -3.02144 | opp_overlap 2515268 2515266 GGACCTCGGCGAGCT CCTCGGTGCCACCCTGC GCGA GCAGGGCGGCACCGAGC TCTTCGAGACCGTCG Hhal_2291 2515225 - 2517876 + | phosphoenolpyruvate carboxylase pyrE 2517883 - 2518530 + | orotate phosphoribosyltransferase Hhal_2293 2518613 - 2519728 + | RND family efflux transporter MFP subunit TERM 1053 2520400 - 2520360 - g 70 -12.5 -3.36492 | opp_overlap 2520367, overlap 2520361 CCTGCAACGGCAGAA CGTGGTCGCCCCGGCCG GCGCCAT CGACCTGGACGACCACC GGGTGGGGCTGTTCG TERM 1054 2520399 - 2520361 - g 73 -16 -2.61681 | opp_overlap 2520367, overlap 2520360 CTGCAACGGCAGAAC GTGGTCGCCCCGGCCG GCGCCAT CGACCTGGACGACCAC CGGGTGGGGCTGTTC Hhal_2294 2519725 - 2522763 + | acriflavin resistance protein Hhal_2295 2522796 - 2523962 + | major facilitator transporter Hhal_2296 2524852 - 2523950 - | acetylglutamate kinase Hhal_2297 2526360 - 2524966 - | phosphomannomutase TERM 1055 2525100 - 2525066 - G 76 -13.5 -3.53012 | opp_overlap 2525073 TCGTTGGCCTCGAAA CGCACCACCAGCACC GGCGT GGTGTTGGAGGCGCG GATCAACCCCCAGCC Hhal_2298 2526861 - 2526400 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Hhal_2299 2528080 - 2526851 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 1056 2527149 - 2527121 - G 77 -15.2 -3.22223 | GAACCCCACCACGAA GGGCCGGGGCGA GCGGG CCGCCACGGCCC GCAAGGTATCCGGCG TERM 1057 2527187 - 2527198 + g 76 -7.2 -4.34759 | overlap 2527184 2527162 CAGGGCCAGGGTCAG GGCG TCCC CGCC TTTCTTGATCTTCTC Hhal_2300 2528211 - 2528609 + | hypothetical protein Hhal_2301 2528683 - 2529357 + | DNA repair protein RadC TERM 1058 2529370 - 2529427 + T 80 -12.5 -3.79519 | gap 1 TAGGGGGCACATCCG CTGCGCGGGGTGCAGCGCTCCATGAGGC GAC GGCTCA-GGCGCTGACCGCCCCGCGCAG TTTGCTGATGGCGTT Hhal_2302 2530267 - 2529404 - | RNA polymerase, sigma 32 subunit, RpoH Hhal_2303 2531478 - 2530432 - | hypothetical protein Hhal_2304 2532158 - 2531478 - | cell division ATP-binding protein FtsE Hhal_2305 2533102 - 2532155 - | signal recognition particle-docking protein FtsY TERM 1059 2532880 - 2532905 + g 79 -14.7 -3.36327 | opp_overlap 2532876 CGCCGGAACCACCGA GGCGCTCGACG AGAC CGTCGAGCACC TTCTGCGTCGCCTCC TERM 1060 2534131 - 2534186 + G 78 -16.2 -3.03124 | gap 2, overlap 2534160 2534161 GCGGGCGCTCCGCCC GCCTGCCGGAGGCCCTGGTGCGCGGC AGCGGG GTGGC-CACCAGCGCCT-CGGCGGGC TATTCGCCGGTGGCG TERM 1061 2534314 - 2534287 - g 78 -17 -2.78384 | overlap 2534252 CCCTGCGCGAGCAGA TCCACCGGCTCC AGGA GGAGCCGGTGGC AGACTCGGAGCTGGA Hhal_2306 2533230 - 2534561 + | peptidase M16 domain-containing protein Hhal_2307 2534561 - 2535916 + | peptidase M16 domain-containing protein Hhal_2308 2535913 - 2536503 + | putative methyltransferase TERM 1062 2536916 - 2536950 + G 74 -10.8 -3.72576 | gap 2 TCCTCAAGCCTCGTC CGCGAG--GTCGCCGC GCTGG GCGGTGACGTCTCGCG TTTCGTCCACCCGGC Hhal_2309 2536514 - 2537008 + | pantetheine-phosphate adenylyltransferase Hhal_2310 2537032 - 2537412 + | hypothetical protein Hhal_2311 2538231 - 2537419 - | formamidopyrimidine-DNA glycosylase TERM 1063 2537487 - 2537446 - G 80 -17.2 -2.82623 | overlap 2537443 CCGGGGGCAGAACCA GGTCCCGCGCTGCGCCAG CCGGAT CTGGCGCAGCGCGCCGCC GCAGACCGGGCACAC Hhal_2312 2539521 - 2538250 - | diguanylate phosphodiesterase TERM 1064 2539653 - 2539618 - R 100 -25.6 -2.87931 | gap 1, overlap 2539621 GCCAGCCCCGATACA CAACGGGCCCGG-TGCC GAA GGCAGCCGGGCCCGTTG GCGATGCGGCGCGTT TERM 1065 2539650 - 2539621 - R 100 -21.5 -3.58905 | gap 1, overlap 2539618 AGCCCCGATACACAA CGGGCCCGG-TGCC GAA GGCAGCCGGGCCCG TTGGCGATGCGGCGC Hhal_2313 2539852 - 2539682 - | ribosomal protein L33 Hhal_2314 2540088 - 2539852 - | ribosomal protein L28 TERM 1066 2540121 - 2540136 + H 87 -7.5 -4.83169 | CCAGCTCGCCGGCAG CCGCC GGAAAA GGCGG TTTTTATACCAGCAT Hhal_2315 2540245 - 2540910 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 1067 2541581 - 2541599 + G 71 -3.1 -4.59773 | gap 1, opp_overlap 2541569 2541568, overlap 2541572 2541571 2541585 CATCGCGCCGCGGCG GGGCGGCA TCTT TGT-GCCC TTTTTCGGCATCCAG Hhal_2316 2540907 - 2541878 + | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Hhal_2317 2541883 - 2543151 + | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein Hhal_2318 2544416 - 2543148 - | 6-phosphofructokinase TERM 1068 2543339 - 2543322 - G 74 -14.1 -3.25942 | ATCCGGCGAGATGAA CGCGGGC GGCA GCCCGCG CTCGATACTCGCCAC Hhal_2319 2544568 - 2545584 + | inositol phosphatase/fructose-1,6-bisphosphatase TERM 1069 2545605 - 2545628 + T 79 -15.2 -3.01924 | TCGGGACTCGGACGA CCCCGCACCC CGCC GGGCGCGGGG TGTTCAGACCCAGTC Hhal_2320 2546552 - 2545632 - | coproporphyrinogen III oxidase Hhal_2321 2547838 - 2546549 - | sun protein TERM 1070 2546644 - 2546662 + g 71 -11.6 -3.60296 | CGGTGCAGCGGCCCA CCGGCGCC AAC GGCCCCGG TTTGGCATCGGCGTG TERM 1071 2546743 - 2546691 - G 74 -11.2 -3.72576 | TGCTCGGCCAGGAAA CCGGCCACCACCTGCTCGTTCTCC TCGGG GAAGATCGAGCAGGTGGCGTAGAG CAACCGCCCGCCCGG Hhal_2322 2548767 - 2547835 - | methionyl-tRNA formyltransferase Hhal_2323 2549276 - 2548767 - | peptide deformylase TERM 1072 2549930 - 2549973 + G 79 -15.2 -3.28712 | gap 1 CGGCATCGATGCGGC CGCCCACCGTGGCGC-GCTGG AGG CCGGCGGCACCACGCTGGCCG TTGTCGGCACCGAGC Hhal_2324 2549400 - 2550566 + | DNA protecting protein DprA Hhal_2325 2550569 - 2551039 + | hypothetical protein TERM 1073 2551046 - 2551075 + F 100 -18.5 -4.07568 | overlap 2551047 GTCCACTGACGACGG GTGGCCGCCGCGC CCCG GCGCGGCGGCCGG TTTTACGGCCCGGCG TERM 1074 2551047 - 2551074 + F 100 -22 -3.04398 | overlap 2551046 TCCACTGACGACGGG TGGCCGCCGCGC CCCG GCGCGGCGGCCG GTTTTACGGCCCGGC Hhal_2326 2551145 - 2553544 + | DNA topoisomerase III Hhal_2327 2554544 - 2553537 - | metalloendopeptidase glycoprotease family TERM 1075 2554304 - 2554284 - G 72 -13.9 -3.21099 | GGCCCCGACCATCAA GGCCCCGGG GAG CCCTGGGCC GCGGGTCCAGGCGAC Hhal_2328 2555160 - 2554585 - | Sua5/YciO/YrdC/YwlC family protein Hhal_2329 2555750 - 2555157 - | hypothetical protein Hhal_2330 2555892 - 2557076 + | hypothetical protein Hhal_2331 2558337 - 2557090 - | metal dependent phosphohydrolase Hhal_2332 2559303 - 2558341 - | NAD-dependent epimerase/dehydratase TERM 1076 2559278 - 2559266 - G 71 -2.6 -4.65916 | TGCATCCCAACAAAA CCGG TTCCG CCGA CGACACAGACGGTCT Hhal_2333 2559351 - 2560217 + | hypothetical protein Hhal_2334 2560791 - 2560219 - | YfaZ family protein Hhal_2335 2562203 - 2560860 - | acetyl-CoA carboxylase, biotin carboxylase Hhal_2336 2562689 - 2562213 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein Hhal_2337 2563156 - 2562710 - | 3-dehydroquinate dehydratase, type II Hhal_2338 2565176 - 2563347 - | cytochrome c biogenesis protein, transmembrane region Hhal_2339 2565511 - 2565191 - | CutA1 divalent ion tolerance protein Hhal_2340 2565739 - 2566029 + | chaperonin Cpn10 Hhal_2341 2566105 - 2567757 + | chaperonin GroEL TERM 1077 2567792 - 2567822 + F 100 -20.5 -4.96501 | opp_overlap 2567794 CCCTGACGCCGTTAA GACCCCTGCTGGG CACGC CCCAGCGGGGGTC TTTGTTTTTGTACAA TERM 1078 2567820 - 2567794 - f 79 -15.1 -3.02511 | opp_overlap 2567792 CTGACGCCGTTAAGA CCCCTGCTGGG CACGC CCCAGCGGGGG TCTTTGTTTTTGTAC Hhal_2342 2567877 - 2568551 + | hypothetical protein TERM 1079 2569407 - 2569393 - g 82 -6.4 -4.77036 | GGCGATGACGAAAAA GATGCA ACC CGCATC AACTCGGTCATCGAG Hhal_2343 2568667 - 2569533 + | lipid A biosynthesis acyltransferase Hhal_2344 2570018 - 2569530 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Hhal_2345 2570371 - 2570015 - | dihydroneopterin aldolase Hhal_2346 2570516 - 2571082 + | isoprenylcysteine carboxyl methyltransferase Hhal_2347 2571096 - 2571782 + | hypothetical protein TERM 1080 2572671 - 2572626 - g 72 -13.9 -3.21747 | gap 1, opp_overlap 2572650 CTACGCCATGATCAA GGCGCGCTGCGTCGGCGGCGAC TAC GCCGCCGGCGACG-AGCTGACC CGTAGCCTGCGCCCC Hhal_2348 2571832 - 2574687 + | (glutamate--ammonia-ligase) adenylyltransferase TERM 1081 2575340 - 2575376 + G 78 -6.3 -4.60797 | AGGAGGCCACCCGTG CCGGCTGCGACGAGGCG CTG CTGCTCGACGTGGACGG TTTTGTCTGTGAGGG Hhal_2349 2574808 - 2575728 + | branched-chain amino acid aminotransferase TERM 1082 2576305 - 2576280 - g 86 -19.1 -3.2056 | ATCGACACGGACCAA TGCTCGGTGGC GGCC GCCACCGAGCA CCTGCTGCAGACCCT Hhal_2350 2575743 - 2576342 + | adenylyl-sulfate kinase Hhal_2351 2576347 - 2578113 + | TrkA domain-containing protein Hhal_2352 2578399 - 2578160 - | hypothetical protein Hhal_2353 2578623 - 2579537 + | sulfate adenylyltransferase subunit 2 TERM 1083 2580889 - 2580847 - g 73 -16.4 -2.52464 | gap 3 CCGCGCGGCAACCGA GGCC-GCCGGCG-C-CGAGAC CGAT GTCCCGCGCCGCCGGCTGGCC CTGAGCAAGGCCCAG Hhal_2354 2579540 - 2581453 + | sulfate adenylyltransferase, large subunit TERM 1084 2581435 - 2581467 + T 84 -17 -2.79133 | gap 1 CACCGCCCTGGAGGA GCGCGGGGTGCTGCG CTAG CGCAGC-CCCCGCCC TCTCCTCACCCCTTG Hhal_2355 2582933 - 2581473 - | hypothetical protein TERM 1085 2583355 - 2583381 + H 71 -7.3 -4.07568 | gap 1, opp_overlap 2583354 2583355, overlap 2583356 CGGAGGGACAAAAGC CCGGGAG-ATCG TGAT CGATGCTCCCGC TTTTGACCCAACGGC Hhal_2356 2583372 - 2584508 + | sulfonate ABC transporter periplasmic-binding protein Hhal_2357 2584568 - 2585392 + | binding-protein-dependent transport systems inner membrane component Hhal_2358 2585389 - 2586129 + | ABC transporter related Hhal_2359 2586126 - 2586863 + | hypothetical protein Hhal_2360 2586869 - 2587519 + | hypothetical protein TERM 1086 2590865 - 2590843 - g 77 -14.8 -3.21416 | CAGGCCGACTACGAA GCCGAGAGCG AGC CGCCCCCGGC AGCGGGTGAAGGCGT Hhal_2361 2587525 - 2591127 + | urea amidolyase related protein Hhal_2362 2591124 - 2592914 + | amidase Hhal_2363 2592968 - 2594083 + | glycosyl transferase, group 1 Hhal_2364 2596141 - 2594084 - | choline/carnitine/betaine transporter Hhal_2365 2598919 - 2596253 - | hypothetical protein TERM 1087 2599857 - 2599832 - g 72 -6.1 -4.37658 | gap 1 AACCCTCCGAGAAAA CGAG-GATCGGC GCC GCCGACAGCTCG AGCACGCGAGGGAAG Hhal_2366 2599098 - 2600654 + | lipopolysaccharide biosynthesis Hhal_2367 2601099 - 2600665 - | hypothetical protein Hhal_2368 2601254 - 2603200 + | peptidase S8 and S53, subtilisin, kexin, sedolisin Hhal_2369 2604041 - 2603271 - | DNA uptake lipoprotein-like protein TERM 1088 2603615 - 2603592 - G 73 -10.2 -3.95584 | gap 1, overlap 2603593 TCGGTAGTAACCAAA GGCGC-GCCGG GCC CCGGCCGCGTC CCGCTCCGCTTCGCC Hhal_2370 2604072 - 2606084 + | general secretion pathway protein D Hhal_2371 2606091 - 2607323 + | general secretion pathway protein F Hhal_2372 2607342 - 2607776 + | general secretion pathway protein G Hhal_2373 2607745 - 2608308 + | general secretion pathway protein H Hhal_2374 2608305 - 2608736 + | general secretion pathway protein I Hhal_2375 2608729 - 2609400 + | general secretion pathway protein J Hhal_2376 2609369 - 2610448 + | general secretion pathway protein C Hhal_2377 2610448 - 2611917 + | general secretory pathway protein E TERM 1089 2611962 - 2611937 - T 89 -18.3 -3.10464 | overlap 2611929 GCACCAAGCCGAACA CGGGGCAGAGG CGCC CCTCCGCCCCG CAGCCTTCAGCTTGG Hhal_2378 2612311 - 2611991 - | high potential iron-sulfur protein Hhal_2379 2615778 - 2612443 - | hypothetical protein Hhal_2380 2617866 - 2615821 - | hypothetical protein Hhal_2381 2618845 - 2617898 - | cytochrome C family protein TERM 1090 2618855 - 2618870 + H 72 -3.2 -4.59414 | GAACAAGGCGCGCTC CTCCCT ATCG ATGGAG TTTTGATTGTTATCA Hhal_2382 2619131 - 2620495 + | two component, sigma54 specific, Fis family transcriptional regulator Hhal_2383 2620516 - 2621970 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 1091 2622123 - 2622149 + F 71 -13.1 -2.92475 | gap 1, opp_overlap 2622128, overlap 2622128 AAGTGCTCTCGGGGC GACAA-GCCGCC TCCG GGCGGCTTTGTC ATTTCTGGAGATGGG TERM 1092 2622143 - 2622128 - f 71 -11.8 -3.28712 | opp_overlap 2622123 2622128 CTCTCGGGGCGACAA GCCGCC TCCG GGCGGC TTTGTCATTTCTGGA TERM 1093 2622128 - 2622143 + F 85 -11.8 -4.17701 | opp_overlap 2622128, overlap 2622123 CTCTCGGGGCGACAA GCCGCC TCCG GGCGGC TTTGTCATTTCTGGA Hhal_2384 2622167 - 2622823 + | hypothetical protein Hhal_2385 2622982 - 2623569 + | hypothetical protein Hhal_2386 2624412 - 2623579 - | type II secretion system protein N Hhal_2387 2624933 - 2624409 - | general secretion pathway M protein Hhal_2388 2626162 - 2624930 - | general secretion pathway protein L Hhal_2389 2627054 - 2626194 - | general secretion pathway protein K TERM 1094 2627210 - 2627199 - H 75 -7.2 -4.38712 | opp_overlap 2627200, overlap 2627201 CTGACGGCGACAAAA CGGG GCGC CCCG GCCTGCCTCCGCTCC Hhal_2390 2627371 - 2627616 + | hypothetical protein TERM 1095 2627654 - 2627684 + T 100 -21.3 -5.40072 | TCGGGCTCTCTATCG GGAGGCCCAATCC AGGAC GGATTGGGCCTCC TTTTTTTGCGCCGCC TERM 1096 2627755 - 2627725 - T 100 -10.5 -5.50499 | gap 1, overlap 2627726 CGATACCCAAAAAAA GCCCCGGAATCC GGGGGGAG GGAT-CCGGGGC CAACAGCCAACCCGA TERM 1097 2627740 - 2627726 - T 86 -12.8 -3.89215 | overlap 2627725 GATACCCAAAAAAAG CCCCGG AAT CCGGGG GGAGGGATCCGGGGC Hhal_2391 2628478 - 2627858 - | GTP-binding protein, HSR1-related Hhal_2392 2628659 - 2629303 + | cytochrome c, class I TERM 1098 2629377 - 2629341 - f 78 -14.4 -3.28712 | gap 1, opp_overlap 2629341 CCCGGCCGCCGAGAA GCCCGGCTGTCCCC-CG TACC CGCGGGGATAGTCGGGC TTTTTCCTGTGCAAC TERM 1099 2629341 - 2629377 + F 100 -18.8 -4.8048 | gap 1, opp_overlap 2629341 CCCGGCCGCCGAGAA GCCCGGCTGTCCCC-CG TACC CGCGGGGATAGTCGGGC TTTTTCCTGTGCAAC Hhal_2393 2629432 - 2630265 + | endonuclease/exonuclease/phosphatase Hhal_2394 2630338 - 2631699 + | sodium:neurotransmitter symporter TERM 1100 2631756 - 2631797 + T 100 -20.2 -3.53224 | overlap 2631759 CCGCCGGAGTCGCTG GACCGACACCGCGGTGGC CTAGGC GCTGCCGCGGTGTCGCTC TTTCAGGCCCACGTA TERM 1101 2631759 - 2631794 + T 91 -20.5 -2.60496 | overlap 2631756 CCGGAGTCGCTGGAC CGACACCGCGGTGGC CTAGGC GCTGCCGCGGTGTCG CTCTTTCAGGCCCAC Hhal_2395 2632304 - 2631774 - | hexapaptide repeat-containing transferase Hhal_2396 2633682 - 2632321 - | glutathione-disulfide reductase Hhal_2397 2633794 - 2635851 + | oligopeptidase A TERM 1102 2635891 - 2635833 - T 72 -12.9 -3.08679 | gap 1, overlap 2635831 CGGGCTCAGCGAAGA TCCCCCGACGCGCGGCTAGCCAGCCCGC CGAG GCGGGCCGGCTAGCCG-GCGGTGTCCGG CCGCAGACGGTAGAT Hhal_2398 2636569 - 2635874 - | tRNA (guanine-N(7)-)-methyltransferase thiG 2637354 - 2636566 - | thiazole synthase Hhal_2400 2637615 - 2637391 - | thiamine biosynthesis protein ThiS Hhal_2401 2638273 - 2637815 - | BadM/Rrf2 family transcriptional regulator Hhal_2402 2638715 - 2638329 - | invasion gene expression up-regulator, SirB Hhal_2403 2639010 - 2639672 + | hypothetical protein TERM 1103 2639680 - 2639702 + T 90 -16.2 -3.53012 | overlap 2639681 CCTTCTAACCTGAGC CGGGGGCGCC GCC GGCGCCCCCC TTTCACCCCACCCCG TERM 1104 2639681 - 2639701 + T 90 -19.7 -2.71712 | overlap 2639680 CTTCTAACCTGAGCC GGGGGCGCC GCC GGCGCCCCC CTTTCACCCCACCCC Hhal_2404 2641216 - 2639705 - | Mg chelatase, subunit ChlI TERM 1105 2641175 - 2641128 - G 73 -16.3 -2.60808 | gap 2, overlap 2641125 2641124 ACCAGTGAGAACGCA GGCAG-CCCCG-GCGCCAGGTGG ACCT CCACCTGGACCTCGGGGGCCGCC ACACCGAGCGCCGCC Hhal_2405 2641560 - 2641285 - | hypothetical protein Hhal_2406 2641785 - 2642123 + | nitrogen regulatory protein P-II Hhal_2407 2642160 - 2643404 + | ammonium transporter TERM 1106 2643445 - 2643464 + F 100 -16.4 -4.93877 | CGAACGGGAGACCTT GCGGGCGC TTCG GCGCCCGC TTTTCTTTGCTGCGG TERM 1107 2643572 - 2643547 - f 79 -4 -4.91109 | TTCCGAGGAGAAAAA CCATGCAATC GAAGTG GATCCCATGG ACCTGCGCCCTCACC Hhal_2408 2643549 - 2644331 + | hypothetical protein Hhal_2409 2644341 - 2644946 + | ABC transporter related Hhal_2410 2644943 - 2645740 + | hypothetical protein Hhal_2411 2646614 - 2645778 - | spermidine synthase Hhal_2412 2646737 - 2648617 + | arginine decarboxylase Hhal_2413 2648653 - 2649522 + | 6-phosphogluconate dehydrogenase, NAD-binding Hhal_2414 2649993 - 2649565 - | hypothetical protein TERM 1108 2649973 - 2649932 - G 77 -10.8 -3.85698 | gap 1, overlap 2649934 2649936 TCCCTCCTCCAGAAA TAG-ACCGGGGCGCCCGAC CCGCC GCCGAGCGGCCCGGCACCA AACCGCTGAACCCTG TERM 1109 2649969 - 2649934 - G 73 -12.5 -3.51934 | gap 1, overlap 2649932 2649936 CCTCCTCCAGAAATA GACCGGGGCGCCCGAC CCGCC GCCGAGCGGCCCGG-C ACCAAACCGCTGAAC TERM 1110 2649968 - 2649936 - G 82 -16.2 -3.3353 | overlap 2649934 2649932 TCCTCCAGAAATAGA CCGGGGCGCCCGAC CCGCC GCCGAGCGGCCCGG CACCAAACCGCTGAA TERM 1111 2650053 - 2650081 + r 77 -14.5 -2.86747 | overlap 2650050 2650055 CCCCGAAGGGTTAGC CATCCTGCCGCAG CAT CAGCGGCTGGATG TCGTTGTCCTCCATG Hhal_2415 2650689 - 2650048 - | sporulation domain-containing protein TERM 1112 2650610 - 2650573 - G 70 -12.5 -3.28416 | opp_overlap 2650609, overlap 2650574 CAGCAGCCACACGAA GCCGGGCACGGCGCGCC GCTC GGTTCGCCGTGCCTGGG CCCCGCCACCGCGGC TERM 1113 2650609 - 2650574 - G 73 -16 -2.56728 | overlap 2650573 AGCAGCCACACGAAG CCGGGCACGGCGCGCC GCTC GGTTCGCCGTGCCTGG GCCCCGCCACCGCGG argS 2652453 - 2650699 - | arginyl-tRNA synthetase Hhal_2417 2654198 - 2652531 - | ABC transporter, transmembrane region, type 1 Hhal_2418 2655930 - 2654191 - | ABC transporter, transmembrane region, type 1 Hhal_2419 2656929 - 2655934 - | cytochrome d ubiquinol oxidase, subunit II Hhal_2420 2658351 - 2656939 - | cytochrome bd ubiquinol oxidase, subunit I Hhal_2421 2661216 - 2658502 - | DNA polymerase I TERM 1114 2661625 - 2661588 - g 71 -9.7 -3.68569 | gap 1, overlap 2661589 GGAGGCAGCCAACAA GGGGGCCCAGGC-GGGCA AGT CGCCCAGCGTGGGCCTCA ACATCCAGCTGCCCA Hhal_2422 2661307 - 2662032 + | hypothetical protein Hhal_2423 2662046 - 2662411 + | hypothetical protein Hhal_2424 2664578 - 2662401 - | UvrD/REP helicase Hhal_2425 2665506 - 2664580 - | LysR family transcriptional regulator TERM 1115 2665374 - 2665393 + g 81 -7.8 -4.62783 | overlap 2665375 GCTCGACGAGCTGGA CCTCGAGG TACT CCTCGAGC TTTTTCAGCTGCGTG Hhal_2426 2667349 - 2665520 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing Hhal_2427 2668178 - 2667351 - | UspA domain-containing protein Hhal_2428 2669609 - 2668188 - | UDP-N-acetylglucosamine pyrophosphorylase Hhal_2429 2670055 - 2669630 - | F0F1 ATP synthase subunit epsilon Hhal_2430 2671444 - 2670068 - | F0F1 ATP synthase subunit beta Hhal_2431 2672378 - 2671509 - | ATP synthase F1, gamma subunit Hhal_2432 2673983 - 2672442 - | F0F1 ATP synthase subunit alpha Hhal_2433 2674532 - 2673996 - | F0F1 ATP synthase subunit delta TERM 1116 2674122 - 2674160 + g 88 -15.2 -3.72324 | CGTCTGCAGCCGCAC CTCTCGGCCGAGGCGCTT ACG GAGCGCTTCGGCCAGGCG TTCTTGCTGCGCGTC Hhal_2434 2674982 - 2674542 - | F0F1 ATP synthase subunit B TERM 1117 2675073 - 2675046 - R 85 -12.6 -4.07568 | opp_overlap 2675031 2675028, overlap 2675047 GCTGGCGGCTTAAAA GCGCCGGCGTGT GTTT ACGCGCCGGCGG CGGCCTCGACAGCAC TERM 1118 2675072 - 2675047 - R 82 -16.1 -3.04398 | opp_overlap 2675031 2675028, overlap 2675046 CTGGCGGCTTAAAAG CGCCGGCGTGT GTTT ACGCGCCGGCG GCGGCCTCGACAGCA Hhal_2435 2675347 - 2675060 - | F0F1 ATP synthase subunit C Hhal_2436 2676188 - 2675388 - | F0F1 ATP synthase subunit A Hhal_2437 2676650 - 2676228 - | ATP synthase I chain Hhal_2438 2677620 - 2676727 - | parB-like partition proteins TERM 1119 2677148 - 2677163 + g 89 -6.8 -5.14563 | gap 1, overlap 2677138 2677139 GATGTGCGGGATCGC CCGACGG CGT CCG-CGG TTTTTTGATGGGACA Hhal_2439 2678449 - 2677655 - | cobyrinic acid a,c-diamide synthase