TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.602687 %AT, 1468077 nt, 8647 terms. Intergenic: 0.674117 %AT, H2T: 180616 nt, 935 terms; T2T: 48863 nt, 828 terms; H2H: 54948 nt, 737 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|15644634|ref|NC_000915.1| Helicobacter pylori 26695, complete genome (length 1667867) nusB 633 - 217 - | transcription antitermination protein NusB TERM 1 296 - 320 + g 72 -10.1 -2.64695 | overlap 295 GGGGTGTTAGGCTCA GCGTAGAGTTT GCC AAGCTCTATGC ATTCATTGATGATGA TERM 2 452 - 464 + g 83 -4.9 -5.24129 | GGCTCGATGAGGGCG TCAAT TTC ATTGA TTTTTTCTAACACGC ribH 1105 - 635 - | riboflavin synthase subunit beta HP0003 1945 - 1115 - | 2-dehydro-3-deoxyphosphooctonate aldolase HP0004 2597 - 1932 - | carbonic anhydrase (icfA) TERM 3 3058 - 3040 - g 81 -5.9 -5.01732 | AACGCTCTTAAAAAA CGCCCCT TGATT ATGGGCG TGAGCGCTTTAACCA HP0005 2719 - 3402 + | orotidine 5'-phosphate decarboxylase panC 3403 - 4233 + | pantoate--beta-alanine ligase HP0007 4697 - 4768 + | hypothetical protein HP0008 4937 - 5020 + | hypothetical protein TERM 4 5220 - 5206 - T 100 -8.6 -5.75945 | opp_overlap 5205 5206 AGGCTTCAAAAAAAA TCCCTT AAA AAGGGA GTTTCACAAAAAGAC omp1 7145 - 5241 - | outer membrane protein TERM 5 7622 - 7593 - R 72 -4.9 -4.83269 | gap 1 AGATGATACTAAAAA GCAAGGG-GGCTTA CAT CATGCCACCCATGC CTCCCATACCGCCCA groEL 9243 - 7603 - | chaperonin GroEL TERM 6 7658 - 7668 + g 76 -2.4 -5.39905 | CCCATATCAGGCATT GCTG GGG CCGC TTTTTCTTCTTTGAT TERM 7 9103 - 9119 + g 70 -3 -5.08824 | gap 1, overlap 9099 GCCATCTTTAGTGAT GCT-TGG AGCG CCATAGC TTTTTTGGATCAACA groES 9624 - 9268 - | co-chaperonin GroES TERM 8 9300 - 9315 + g 73 -7.6 -4.0044 | opp_overlap 9292, overlap 9285 9292 9282 CATGACAGCAAGCTT CATGCT CTTT AGCATG TTTATGGTCATGATT TERM 9 9455 - 9443 - G 75 -7.7 -4.09685 | opp_overlap 9443 9442 TTGTATTTGCCAAAA GCGAT CAC ATCGC CTTCTTTAACGCATT TERM 10 11053 - 11065 + G 71 -4.9 -4.5528 | TAAAGAAATGTTAGG GTTTT TAA AAAAC TTTTCCTTGCTTTTA dnaG 9911 - 11590 + | DNA primase HP0013 11587 - 12639 + | hypothetical protein TERM 11 12845 - 12833 - g 72 -10.5 -2.55242 | opp_overlap 12831 12833, overlap 12832 12829 AGCGAAGAAAAGGAC GCCCC TAA GGGGC TATTCCCTTTTTATA TERM 12 12833 - 12845 + G 77 -10.5 -3.30767 | opp_overlap 12833 12832 12829, overlap 12831 AGCGAAGAAAAGGAC GCCCC TAA GGGGC TATTCCCTTTTTATA TERM 13 13496 - 13483 - g 76 -6.7 -4.35581 | opp_overlap 13463, overlap 13462 TGAAAAGATTCAAAA CCTCT TAGA AGAGG ACGCCCTACAAGCCA HP0014 12728 - 13555 + | hypothetical protein HP0015 13702 - 13983 + | hypothetical protein TERM 14 14143 - 14168 + G 70 -2.5 -5.14563 | TATTGTATTTAGGGT TTTTAGCGCTC TTTA GCGTGCTGGAA TTTTTTGATGAAGAC HP0016 13983 - 14246 + | hypothetical protein TERM 15 16018 - 16034 + G 74 -3.7 -5.13473 | AACGCTTTGAATGAT GCGTT CAACTCC AACGC TTTTTTAAATGTGAT HP0017 14248 - 16611 + | virB4 homolog (virB4) TERM 16 17594 - 17604 + G 89 -5.4 -5.40072 | AAGCCCTTTTGTAGC CCAA GAC TTGG TTTTTTTCAAAAACC HP0018 16863 - 18272 + | hypothetical protein HP0019 18380 - 19345 + | chemotaxis protein (cheV) TERM 17 19430 - 19407 - g 83 -3.2 -5.61596 | gap 1, overlap 19408 ACGCTTAGAAAAAAA CGCCAAGATTT TAG AAATCGTG-CG CCAACAAAGTGGGGC HP0020 19342 - 20559 + | carboxynorspermidine decarboxylase (nspC) HP0021 21141 - 20569 - | lipid A 1-phosphatase HP0022 22717 - 21152 - | lipid A phosphoethanolamine transferase HP0023 22773 - 22892 + | hypothetical protein HP0024 22903 - 22995 + | hypothetical protein TERM 18 23010 - 23034 + T 74 -7.2 -4.04174 | ATTTCTAAGAGCGTT CCCCTAAG CCTAAAAAA CTTAGGGG TTTCCTTATGTGAAG TERM 19 23307 - 23282 - T 95 -11.3 -3.95214 | opp_overlap 23287, overlap 23280 23287 AGTCAGTTAAAAAGA TTAAACCCCCT AAAA AGGGAGTTTAA AAAGGAGTTTAAGCT TERM 20 23302 - 23287 - T 71 -6.8 -4.13748 | opp_overlap 23287, overlap 23282 23280 GTTAAAAAGATTAAA CCCCCT AAAA AGGGAG TTTAAAAAGGAGTTT HP0025 25459 - 23324 - | outer membrane protein (omp2) TERM 21 25888 - 25910 + r 85 -9.2 -3.99678 | opp_overlap 25883 25881 ATTTATAAGAGCGTT CCCTAAGC CCAAAAA GCTTAGGG TTTGCTTGTAAAAGT gltA 27358 - 26078 - | type II citrate synthase TERM 22 27847 - 27819 - g 70 -8.2 -3.66301 | gap 1 ATTATAAAGAATTAA GCCCAG-AAGAGC AATG GCTCTTACCGGAC ACTATTGAAGCGATT HP0027 27557 - 28834 + | isocitrate dehydrogenase (icd) HP0028 28901 - 29434 + | hypothetical protein HP0029 30067 - 29411 - | dethiobiotin synthetase (bioD) HP0030 31852 - 30071 - | hypothetical protein TERM 23 31471 - 31496 + g 72 -3.3 -5.16681 | TTTTAGGGTCTGCTC CGCTCTTAT AAGCATAG ATTAGAGCG TTTTGTTCTTTTTCG TERM 24 31727 - 31738 + g 72 -4.4 -4.83243 | CGCCTTACCAAGCAC CCTA ACGC TAGG TTTATTTTGTCTAGC HP0031 31961 - 32374 + | hypothetical protein HP0032 32405 - 32680 + | hypothetical protein TERM 25 33900 - 33881 - g 85 -4.2 -5.53991 | overlap 33884 GATCGAGGAAAAAAA TCAGCCCT AAAA AGGGCAAA AAAATCGGCGTTGAT TERM 26 34660 - 34645 - g 73 -5.4 -4.65153 | TTAGACAAATTAAAA GCCCTA GCGC TAGAGC AAGACATAACCTTAA TERM 27 34736 - 34715 - g 74 -3.7 -5.02074 | TCATCGCGCAAAAAA GCTACCAAA CGAC TTTAGGAGC GAGAGAAATTAAAAA TERM 28 34766 - 34754 - g 100 -4.9 -5.75822 | overlap 34757 GAGAAATTAAAAAAA TCATT CAT AATGA AATCAAAACTAAATT HP0033 32680 - 34905 + | ATP-dependent C1p protease (clpA) HP0034 34895 - 35248 + | aspartate alpha-decarboxylase HP0035 35251 - 35544 + | hypothetical protein HP0036 35544 - 36548 + | hypothetical protein TERM 29 37169 - 37181 + G 85 -4.1 -5.66229 | AGTGCTTCGCTCTTG GGTTT TAC AAGCC TTTTTTGTTGTTGGT HP0037 36556 - 37611 + | NADH-ubiquinone oxidoreductase subunit HP0038 37738 - 38475 + | hypothetical protein TERM 30 38493 - 38504 + G 72 -3.6 -5.17507 | overlap 38477 CGTAAGGTTTTATAC GCTC TTGT GGGC TTTTTGTTGGCTTTT TERM 31 38508 - 38539 + G 82 -6 -5.00616 | overlap 38511 GCTCTTGTGGGCTTT TTGTTGGCTTTTAG CGCT TTAAAAGCCGATGA TTTTTTAGAAGAAGC TERM 32 38661 - 38644 - g 71 -4.9 -4.61527 | opp_overlap 38644, overlap 38635 AAAACCGCTCAAAAA TGTCCAA CACT TTGAACA TTGATTACTTTCAAG HP0039m 38472 - 39453 + | component of conjugal plasmid transfer system HP0041 39446 - 39817 + | hypothetical protein HP0042 39880 - 40581 + | trbI protein TERM 33 41348 - 41333 - g 86 -9 -4.34482 | opp_overlap 41311, overlap 41311 TTTTTGAAAAAAAGA TCGCTC GTTT GAGCGA AAAGAGCATGCAAGA HP0043 40651 - 42063 + | mannose-6-phosphate isomerase (pmi) or (algA) HP0044 42105 - 43250 + | GDP-D-mannose dehydratase HP0045 43243 - 44175 + | nodulation protein (nolK) HP0046 44299 - 44436 + | hypothetical protein TERM 34 44458 - 44444 - T 72 -5 -4.91852 | TGCATTAAAAACAAA CTCGTA TTT TACAAG AGAGAGTTTTGATTG HP0047 46039 - 45041 - | hydrogenase expression/formation protein (hypE) HP0048 48351 - 46042 - | transcriptional regulator (hypF) TERM 35 46400 - 46388 - GR 87 -7.7 -4.7416 | opp_overlap 46388 46399 TCAAAAGGGTAAAAA GCGAT CTC ATCGC TTTGTAAGGCTAGAT TERM 36 46388 - 46400 + gr 74 -7.7 -3.87994 | opp_overlap 46388, overlap 46399 TCAAAAGGGTAAAAA GCGAT CTC ATCGC TTTGTAAGGCTAGAT TERM 37 46838 - 46826 - GR 72 -9.1 -2.77344 | overlap 46825 GGATCTTGTAACAAT GCGTC TAA GACGC TCGCTAAAAAGTGGG TERM 38 46995 - 46979 - GR 86 -4.5 -5.4505 | opp_overlap 46979 GTTTTTAAGAAAAAA TTCAAAG TTT CTTTAAA GTGTTTTTCATTTTC TERM 39 47171 - 47157 - GR 77 -8.5 -3.66874 | overlap 47158 47167 47168 GCAAGGTGAGGTAAA GGGGG GCAAA CCCCC TAGCCAAACGCATGG TERM 40 47171 - 47158 - GR 75 -9.5 -2.79803 | overlap 47157 47167 47168 CAAGGTGAGGTAAAG GGGGG CAAA CCCCC TAGCCAAACGCATGG TERM 41 48256 - 48245 - GR 88 -7.2 -4.99645 | overlap 48246 AGGGTATAAATAAAA GGGC GCAT GCCC ACGCCTTGAACCACG TERM 42 48320 - 48300 - GR 74 -9.1 -3.08812 | opp_overlap 48299, overlap 48299 TTTTGTTCAATAAAG TTGCATCGT TAC ACAATGCAA ACTTCCATGCTGTTT HP0049 49283 - 48291 - | hypothetical protein HP0050 50033 - 49335 - | adenine specific DNA methyltransferase (dpnA) HP0051 51097 - 50030 - | cytosine specific DNA methyltransferase (DDEM) TERM 43 50947 - 50957 + g 88 -8.2 -5.05301 | opp_overlap 50947 TGATGTCCCCACAAA CGCC TAT GGCG TTTTTATGGTTGTTT TERM 44 50957 - 50947 - G 73 -8.2 -3.86346 | opp_overlap 50947 TGATGTCCCCACAAA CGCC TAT GGCG TTTTTATGGTTGTTT TERM 45 51289 - 51271 - R 72 -9 -2.78283 | overlap 51270 ACAAGTAGGGCAAAG TTTAGCAA GAT TTGCTAAA ACATCTAATTCTCTG HP0052 52264 - 51272 - | hypothetical protein TERM 46 51394 - 51378 - G 73 -8.1 -3.91402 | opp_overlap 51378 51373, overlap 51373 51372 51382 TGATATAAAGGTAAA GAAAGAA AAC TTCTTTC TTTAATGTCGTAATC TERM 47 51378 - 51394 + g 73 -8.1 -3.86916 | opp_overlap 51373 51372 51378 51382, overlap 51373 TGATATAAAGGTAAA GAAAGAA AAC TTCTTTC TTTAATGTCGTAATC TERM 48 51946 - 51958 + g 77 -4.8 -4.86621 | opp_overlap 51946 51945 TGCTTTCAAAAAAGC CGCT CAAAA AGCG TTTTTGATTGGGGGT HP0053 53718 - 52459 - | hypothetical protein TERM 49 53650 - 53660 + g 70 -3.2 -4.95758 | TTGATCTATCCATCG CGCA TTT TGTG TTTTTCTAATGTCAT TERM 50 53706 - 53696 - G 74 -4 -5.055 | opp_overlap 53696 53697, overlap 53697 CTAAGTTTTAAAAAA TCAA TCA TTGA TTGCTCTTTCATAAG HP0054 56186 - 53715 - | adenine/cytosine DNA methyltransferase HP0055 57714 - 56224 - | sodium/proline symporter HP0056 61298 - 57741 - | delta-1-pyrroline-5-carboxylate dehydrogenase TERM 51 59379 - 59354 - G 79 -8.3 -4.0371 | gap 1 TAGTGCCTACAGAAA TGCCCACAGGGA AAT TCCATG-GGGCA ATGACCACGCCCACG TERM 52 61767 - 61757 - g 70 -3.2 -4.89054 | TCCACAAAAAAAGAA GTGC AAT ACAC GCCTAAGGGCTTTTT HP0057 61619 - 61828 + | hypothetical protein HP0059 63145 - 63999 + | hypothetical protein TERM 53 64717 - 64702 - g 79 -6.8 -4.60746 | GCAAAAATATGAAAA CCCCAC GATA GTGGAG TTCAGATATAAAGAA TERM 54 65018 - 65032 + G 70 -3.6 -4.95155 | AACATGGAAAATGGC GTGTTT TTG AAATAC TTTTTATCCTATCCC HP0060 64016 - 66457 + | hypothetical protein TERM 55 66942 - 66917 - g 79 -6.8 -4.55004 | AATATAAAAGAGAAA GAGGCGAAAC GCTAGA GGTTCGCCCC ACAACACCCCCTAGC TERM 56 66967 - 66947 - g 75 -9.7 -3.28791 | AGGTTCGCCCCACAA CACCCCC TAGCTAT GGGGGTG GAAGCATTAGAATCA HP0061 66454 - 67023 + | hypothetical protein HP0062 67039 - 67299 + | hypothetical protein TERM 57 68599 - 68587 - gf 71 -7.7 -3.56092 | TCATCATGCCCTAAA GGCTT TAG AAGCC ACGCTTAAAAATAGG HP0063 67310 - 68800 + | hypothetical protein HP0064 68770 - 69189 + | hypothetical protein HP0065 69191 - 69544 + | hypothetical protein HP0066 69468 - 71963 + | ATP-binding protein HP0067 72818 - 72021 - | urease accessory protein (ureH) HP0068 73417 - 72818 - | urease accessory protein (ureG) TERM 58 73371 - 73383 + g 70 -9.1 -3.14132 | opp_overlap 73370 73371 AAAGCTTCAATCAAG GCGGT TTT ACCGC TTCCTACAGGACCAC HP0069 74210 - 73446 - | urease accessory protein (ureF) ureE 74745 - 74233 - | urease accessory protein UreE TERM 59 74436 - 74446 + g 75 -8.2 -4.02719 | opp_overlap 74436 74435 CGCCATAGTATAAAG CCGC ATG GCGG TTTCCTATTTCATAG HP0071 75334 - 74747 - | urease accessory protein (ureI) TERM 60 75486 - 75451 - R 95 -4.9 -6.23317 | gap 1, overlap 75452 75453 ATAAAAACAAAAAAA GC-CCCCAATTTTTTG ATAAA CAAAAAATCAGAGAGC TAAAAACTAAGGATT TERM 61 75522 - 75500 - R 73 -9.2 -2.9838 | overlap 75497 75505 GCTAAAAACTAAGGA TTTAAGGAGC GTT GCTCCTAAAA AATCCTAGAAAATGC TERM 62 75517 - 75505 - R 74 -9.1 -3.15252 | overlap 75500 75497 AAACTAAGGATTTAA GGAGC GTT GCTCC TAAAAAATCCTAGAA ureC 77236 - 75527 - | urease subunit alpha HP0073 77956 - 77240 - | bifunctional urease subunit gamma/beta lspA 78775 - 78302 - | lipoprotein signal peptidase TERM 63 78493 - 78515 + g 71 -4.8 -4.57569 | opp_overlap 78493 78491 CCCCGGCGCCAAACA CCATGCCAAA CTC TATCGCATGG TTTTTAAAAAGCTCC TERM 64 78593 - 78571 - G 75 -5.6 -4.67038 | overlap 78566 GCCCTAAAATCAAAA GGATTTGCAA GTA TTTCAAACCC CCCTCTAAAAAACTG HP0075 80106 - 78769 - | phosphoglucosamine mutase TERM 65 80051 - 80067 + g 83 -12.3 -2.91695 | opp_overlap 80050 80047 80049, overlap 80048 CGCATCACAAACATG GGGGTGA GTT TCACCCC TGCTTTACCCCTCAC rpsT 80196 - 80465 + | 30S ribosomal protein S20 TERM 66 80701 - 80688 - g 73 -2.4 -5.22312 | AGCGATATTAAAAAA CTCA CCGAAT TGAG TAAAGAGCAAAGCTC prfA 80589 - 81647 + | peptide chain release factor 1 TERM 67 82038 - 82022 - f 84 -3.7 -5.83226 | AATGCAATAAAAAAA GAAATTC TTA GGATTTC TCACATTAAGGAGTT HP0078 82058 - 82315 + | hypothetical protein TERM 68 82939 - 82927 - g 74 -9.1 -3.49321 | overlap 82925 82923 AGGAACCAAAACACA CCGCT TCA AGCGG CACACCACCAGCTCC TERM 69 83396 - 83377 - g 81 -5.7 -5.1287 | overlap 83378 83382 CTGATACGCAAAAAA CGCAAGC CGTTAC GCTTGCA ACTGCTAGTGATAGT HP0079 82326 - 84113 + | outer membrane protein (omp3) TERM 70 84129 - 84154 + F 100 -10.5 -5.29208 | opp_overlap 84135, overlap 84116 GCCTTTCTATTCTTT CCAATAGAGGG TTTT CTCTCTGTTGG TTTCTTTTTTCTTTT TERM 71 84710 - 84722 + G 75 -7.7 -4.06491 | GATTCTTTTTATAGC TACCG CAC CGGTA TTTATATCCCCTTAG TERM 72 84842 - 84832 - g 79 -6.8 -4.57218 | opp_overlap 84832 84831 ACAAGAGAATGAAAA GGCT CAA AGCC CTTATTACAGAAACA HP0080 84359 - 86140 + | hypothetical protein TERM 73 86450 - 86465 + G 71 -7.6 -3.90291 | AAGCCTTTCGTGTTA GCATTC AATG GAATGC TTTAGTTAGGAAGCT HP0081 86410 - 86532 + | hypothetical protein HP0082 88677 - 86656 - | methyl-accepting chemotaxis transducer (tlpC) TERM 74 88793 - 88778 - R 88 -6.8 -5.22137 | AAGCAGAAAATAAAA GAGAGC CAAA GCCCTC CAAAGCTCCCCCCAA rpsI 89222 - 88833 - | 30S ribosomal protein S9 rplM 89644 - 89219 - | 50S ribosomal protein L13 HP0085 90145 - 89957 - | hypothetical protein HP0086 91504 - 90152 - | hypothetical protein TERM 75 90786 - 90764 - G 90 -7.6 -5.18371 | overlap 90766 CGGCACAAAATAAAA GCTGCCCGCC ACA GGCAAGCACC CTAAATCTAGGCCAT HP0087 92931 - 91558 - | hypothetical protein TERM 76 91810 - 91800 - G 70 -5.4 -4.41348 | GTGCGCCTAAATAAA GCAT GAT ATGC CCTTTTAAATAGATG HP0088 94967 - 92952 - | RNA polymerase sigma factor RpoD TERM 77 92981 - 92995 + g 74 -9.2 -3.5944 | AGTTTCTTAAAATGC GCCCGT ACT GCGGGC TTCTCAATTTTTTAA TERM 78 93117 - 93128 + g 85 -7.2 -4.89339 | opp_overlap 93116 AAGCCCAAAACGCAT GCGG ATCA CCGC TTTTTCTCGCTCATT TERM 79 94185 - 94202 + g 78 -2.7 -5.46129 | TTCTACACGCTTCTT GTCTTTT TCAG AAACGAC TTTTTTCCTTTCTTC HP0089 95886 - 95191 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase HP0090 96826 - 95897 - | acyl-carrier-protein S-malonyltransferase TERM 80 97192 - 97159 - H 74 -9.7 -2.53244 | overlap 97158 97157 TTACAAATACAAATT TTTAGGTTGGGTG AAGAGAGA CACCCAGCCTAAA CCCTATAAGGGTTGT TERM 81 97584 - 97607 + G 76 -3.2 -5.24129 | gap 1 AAGTTTATGAGTTTA TTCG-TCAAAC GGG GTTGGAGCGAA TTTTTTGTAACAGAA HP0091 97256 - 98089 + | type II restriction enzyme R protein (hsdR) HP0092 98083 - 98916 + | type II restriction enzyme M protein (hsdM) HP0093 99376 - 98936 - | hypothetical protein HP0094 99840 - 99373 - | hypothetical protein TERM 82 99538 - 99518 - G 81 -2.5 -5.54264 | opp_overlap 99521, overlap 99521 99523 AAATAGCCAAAAAAA TAAGTCAAG CGG CTTGGCTTT AGCAATTTAGGCTCG TERM 83 99933 - 99947 + r 90 -5.8 -5.63517 | AGGGCAAGTAACGCT TTCAAA TCA TTTGAA TTTTTTATTTGAAAA HP0095 100469 - 99939 - | hypothetical protein HP0096 100542 - 101486 + | 2-hydroxyacid dehydrogenase TERM 84 101623 - 101601 - T 87 -5.6 -5.59655 | opp_overlap 101601 CAAATTAAGAAAAAA CCTTTAGG TGGATGG CCCAAAGG CTTTTATTAAAGGGG HP0097 102356 - 101643 - | hypothetical protein HP0098 103921 - 102461 - | threonine synthase TERM 85 105929 - 105919 - g 81 -6.8 -4.72386 | GAAAGGACGCAAAAA TCGC TCA GCGA GATTGAAGCCAATAT HP0099 104125 - 106152 + | methyl-accepting chemotaxis protein (tlpA) TERM 86 107104 - 107088 - g 70 -5.9 -4.33151 | overlap 107072 TACGATAATTTAAAA GAGTTAA ACC TTAACCC CTTAAATTATGAAGA HP0100 106152 - 107258 + | hypothetical protein HP0101 107471 - 108232 + | hypothetical protein HP0102 108994 - 108215 - | hypothetical protein TERM 87 108311 - 108298 - G 79 -5.3 -5.13521 | AAAGCATGGAAAAAA CATTC GCCT GAATG CCGTTTTCTTTACAT HP0103 110722 - 109025 - | methyl-accepting chemotaxis protein (tlpB) TERM 88 110545 - 110558 + g 74 -3.8 -5.0916 | opp_overlap 110545 TTGTCATGTAAGCGA GCGT TTTTTC ACGC TTTTTGTATTGCCCG HP0104 112673 - 110928 - | 2',3'-cyclic-nucleotide 2'-phosphodiesterase (cpdB) TERM 89 110983 - 111008 + g 71 -3.9 -4.84033 | overlap 110973 110972 GTCCTCCCATCCTTT GAGGTGGGGAT TTTG ATGCTCCCCTC TTTTAATTTTTCTCT TERM 90 111577 - 111593 + g 77 -7.9 -4.24326 | AAATTGAATAAGGCT GCCGCTG AAA CATCGGC TTTTGCGTAATATTT HP0105 113280 - 112828 - | S-ribosylhomocysteinase TERM 91 112896 - 112871 - G 71 -3.9 -5.00616 | overlap 112873 CGTTTGTCTAAAAAA GCGCGCGCTAA ATCC TTAGCACCCTC TAAAGTGTGGTTAGC HP0106 114475 - 113333 - | cystathionine gamma-synthase/cystathionine beta-lyase TERM 92 114078 - 114089 + g 79 -5.8 -4.99134 | AGGGCTTTGGTGTTG GGCT TGAT AGCC TTTTTAATTTGGGAT HP0107 115420 - 114500 - | cysteine synthetase (cysK) TERM 93 114575 - 114589 + g 70 -7.8 -3.68351 | CTGGCTGCCTTCGGG GAGGCG TTG CGCTTC TTTCAATGCTGCCAC TERM 94 114743 - 114729 - G 78 -2.8 -5.41746 | AAGTTTTCAAAAAAA GGAG GGATGAA CTCC ACGCCAATGCCCTCA HP0108 115459 - 116019 + | hypothetical protein TERM 95 116182 - 116164 - T 83 -10.4 -3.29461 | opp_overlap 116153, overlap 116153 GAACTCCCCCCATAA GGGATTTT CCT AAAATCCC ACCAACGCTTTTAAG TERM 96 116220 - 116235 + T 74 -6.2 -4.50358 | opp_overlap 116231, overlap 116231 TTAAAAAAGCTATCG CTTGAT TACA ATCAAG TTTTGATATTTGGAT dnaK 118224 - 116362 - | molecular chaperone DnaK TERM 97 117419 - 117429 + g 72 -3.2 -5.15117 | TCAGTCTCCATCGCA GAGC TCA GTTC TTTTTTAGCGTTTTC TERM 98 118184 - 118173 - G 71 -7.2 -3.86015 | opp_overlap 118172 CATTGCCTTCATAAA CCGC CATT GCGG AGTTGGTTGTCCCTA HP0110 118823 - 118254 - | co-chaperone and heat shock protein (grpE) HP0111 119653 - 118823 - | heat-inducible transcription repressor TERM 99 119271 - 119281 + g 79 -3.2 -5.40474 | ACTCTTTCTAAACGC TCCA AAC TGGG TTTTTTTAACAGCGT TERM 100 119320 - 119332 + g 79 -5.5 -4.87893 | CAAAATTTTCACTCG CGCTT TTT AGGCG TTTTTCATTCACCTT TERM 101 119974 - 119990 + H 75 -8 -3.63315 | TTTAGTAAAGTTATC GCTTGC TTGAC GCAAGC TCTTTACTATTTTAT HP0112 119980 - 120675 + | hypothetical protein HP0113 120696 - 120992 + | hypothetical protein HP0114 122888 - 121002 - | hypothetical protein TERM 102 121895 - 121883 - G 70 -3.4 -4.98531 | overlap 121884 121885 GGTGCAAATCAAAAA GGTT GGTAT AACC AAAGGGGCGGAAGCT TERM 103 122928 - 122917 - R 88 -7.2 -4.94222 | opp_overlap 122917 122916 122924 122925 AATAACTGATAAAAA GGGC TAAC GCCC CTTTGAATTAAAAGG HP0115 124492 - 122948 - | flagellin B TERM 104 125371 - 125357 - g 71 -4.2 -5.00765 | AACGAATTAGAAAAA GAAAGC TAC GCTATC TCCAGTATCGTTAAA TERM 105 125874 - 125885 + G 75 -5.8 -4.76644 | AGTTTAAAGCGAGTG GGAG AAAG CTCC TTTTTGATGGCTATT HP0116 124658 - 126868 + | DNA topoisomerase I TERM 106 126975 - 126954 - g 74 -4.5 -5.00616 | opp_overlap 126957, overlap 126957 TCGCCCTCTAAAAAA CAATGCAAT TACA ATTGCATTT ATTGCGAGTTGGGTA TERM 107 126972 - 126957 - g 77 -6.2 -4.61482 | opp_overlap 126957, overlap 126954 CCCTCTAAAAAACAA TGCAAT TACA ATTGCA TTTATTGCGAGTTGG TERM 108 126957 - 126972 + G 71 -6.2 -4.183 | opp_overlap 126957 126954 CCCTCTAAAAAACAA TGCAAT TACA ATTGCA TTTATTGCGAGTTGG TERM 109 127245 - 127259 + G 70 -3.6 -4.87133 | CAAGCCTTAAAGGAA TTTGAC ATC GTTAAA TTTTCTTTAGACGCT HP0117 126861 - 127787 + | hypothetical protein HP0118 129118 - 127931 - | hypothetical protein TERM 110 129252 - 129242 - R 71 -5.4 -4.65916 | opp_overlap 129237 129242 TCCATTCCAATAAAA CTTG ATA CAAG TTTTCCTTATACCTT TERM 111 129295 - 129271 - R 70 -7.1 -3.63627 | TCCTTATACCTTAAA CTCACACCCTT TTA AAGGGAGCAAG CTAATAAGCGATTTT HP0119 130768 - 129383 - | hypothetical protein TERM 112 130922 - 130912 - R 71 -5.4 -4.65916 | opp_overlap 130912 130907 TCCATTCCAATAAAA CTTG ATA CAAG TTTTCCTTATACCTT TERM 113 130965 - 130941 - R 70 -7.1 -3.63627 | TCCTTATACCTTAAA CTCACACCCTT TTA AAGGGAGCAAG CTAATAAGCGATTTT HP0120 132249 - 131053 - | hypothetical protein HP0121 134784 - 132346 - | phosphoenolpyruvate synthase TERM 114 132930 - 132949 + g 74 -5 -4.78572 | gap 1 AATACCGACTAGCCC CCCTATAGC CAA GC-ATGGGG TTTTCTTCATTAGGC TERM 115 133078 - 133098 + g 73 -8.5 -3.66654 | GCCAATGCCTTCAGC GATTTTTTT CAC AAAAAAATC TTTAGGGTTAGCATA TERM 116 133122 - 133138 + g 86 -2.3 -5.95539 | TAGCATAGCCTGCCA TGAGGTT TTC AATTTCA TTTTTTTCTTTCACG HP0122 134971 - 135102 + | hypothetical protein TERM 117 136657 - 136667 + G 79 -6.8 -4.55295 | AGCGAACATTTTGGG GGGA ATT TCCC TTTCTTTGTCGCGCC thrS 135142 - 136980 + | threonyl-tRNA synthetase infC 136977 - 137588 + | translation initiation factor IF-3 TERM 118 137685 - 137675 - g 76 -2.4 -5.52384 | TTTTGACTAAAAAAA GCCC TAA GCGC AAAGCCAATCTAAAC rpmI 137569 - 137763 + | 50S ribosomal protein L35 rplT 137857 - 138207 + | 50S ribosomal protein L20 TERM 119 138257 - 138286 + F 73 -8.9 -2.97768 | gap 1, opp_overlap 138257, overlap 138256 138264 AAAAAGGTGAGAGGA TTTAGG-ACTTTTT ACT AAAAAGTTCCTAAA ATTGATTTTTGTTTC TERM 120 138286 - 138257 - f 72 -8.9 -2.66882 | gap 1, opp_overlap 138256 138257 138264 AAAAAGGTGAGAGGA TTTAGG-ACTTTTT ACT AAAAAGTTCCTAAA ATTGATTTTTGTTTC TERM 121 138502 - 138488 - g 75 -2.8 -5.1963 | CCTAAGCAAGAAAAA GCTATT AAG ACTAGC CCTACCAAAAAAGGT HP0127 138407 - 139267 + | outer membrane protein (omp4) HP0128 139319 - 139444 + | hypothetical protein HP0129 139617 - 140042 + | hypothetical protein TERM 122 140084 - 140123 + F 74 -6.4 -4.47259 | gap 1 ATTTTTGTGAAACCA CGCCGTAAGTCCC-TAGCT TTT GGCTGTGGGGATTAAGGCG TTTTCGTGTTATAAT HP0130 140453 - 141313 + | hypothetical protein HP0131 142028 - 142129 + | hypothetical protein HP0132 143594 - 142227 - | L-serine deaminase (sdaA) HP0133 144835 - 143594 - | serine transporter (sdaC) TERM 123 143835 - 143821 - G 81 -2.8 -5.64274 | overlap 143822 TCAGCCATAAAAAAA TCGTTA CGC TAACGC TCAAGGGTTTAGAAG TERM 124 146058 - 146042 - g 79 -5.1 -5.06414 | overlap 146044 GTGTTGGAAGAAAAA CGCCATA TTT TATGGAG CATTGATCCCATGCA HP0134 145016 - 146365 + | 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (dhs1) TERM 125 146363 - 146394 + F 79 -6.8 -4.64383 | overlap 146365 AAAAAACAGCACGCT TAGTTAAAAAGAGA TTAA TCTTTTTTTAACTC TTTTACTTTATAATT TERM 126 146365 - 146392 + F 83 -9.4 -3.91676 | overlap 146363 AAAACAGCACGCTTA GTTAAAAAGAGA TTAA TCTTTTTTTAAC TCTTTTACTTTATAA HP0135 146444 - 146578 + | hypothetical protein HP0136 147271 - 146813 - | bacterioferritin comigratory protein (bcp) TERM 127 147141 - 147175 + g 76 -3.6 -5.24129 | overlap 147135 147143 TCTAGAGTGCATCCG GGGGTGTTGTCTTT AGGGTAG AAATACAGCACCAC TTTTTTATGGAGCAA HP0137 147916 - 147281 - | hypothetical protein HP0138 149354 - 147909 - | putative iron-sulfur protein HP0139 150111 - 149383 - | hypothetical protein TERM 128 149424 - 149444 + g 74 -4 -5.08824 | AGTCATAAAAATGCA TGGGTTTT GTCAA AGAGCCCA TTTTTTGCATAGCGG TERM 129 150386 - 150419 + G 93 -6.6 -5.46276 | AGGCCATATTTGGCT GAGCGCTTTAGTCG CACTTT CGCCTATTGCGCTC TTTTTTGTCTCTCTT TERM 130 150517 - 150541 + G 76 -2 -5.38951 | opp_overlap 150518 150519, overlap 150518 150519 TATTTGTGTATAAAA TGCCCGCTCA AATGG TGAGCGCGAG TTTTTTCTATGGCTT TERM 131 150927 - 150939 + G 72 -3.3 -5.17576 | overlap 150928 TCTCAAATGGTGGGC AGGGT GTT ACCCA TTTTTTCCATTGGTA TERM 132 151220 - 151203 - g 74 -4.1 -5.1634 | opp_overlap 151203 ATAAACACAGAAAAA CACCATA TTTG TAAGGTG GTTGTGGCGTGGATG HP0140 150342 - 151991 + | L-lactate permease (lctP) TERM 133 152488 - 152505 + G 89 -9.9 -4.27117 | CGCAGCGATTTTAGT GGGCTTA GGGT TAAGCCC TTTGTATTCTGCCGG TERM 134 152723 - 152739 + G 75 -2.9 -5.30616 | AAAGAAACTTTTCCG GCCGT TTTTATC GCGGC TTTTTCTTTCGCTGG TERM 135 153475 - 153485 + G 71 -6.8 -4.11216 | CGCCCAACGATTGCA CCTC CCT GAGG TTTTAACCCTAACGG HP0141 152048 - 153703 + | L-lactate permease (lctP) HP0142 154713 - 153727 - | A/G-specific adenine glycosylase (mutY) TERM 136 153971 - 153986 + g 78 -4 -5.24129 | opp_overlap 153971 TGGTGCATCCCCAAA TAGAGT TTTT GCTCTA TTTTTTCTAAAGCGA TERM 137 154276 - 154266 - G 70 -3.2 -5.00138 | GATCCAAACCAAAAA GCCT TAA AAGC ACGCGCTTGATATTA TERM 138 154982 - 154968 - H 93 -8.5 -4.8543 | opp_overlap 154975, overlap 154978 154979 CAATCCCTACAAAAA GCGCG AATAA CGCGC TCACATGAGCGGTGA TERM 139 155989 - 155999 + H 70 -8.2 -3.04792 | opp_overlap 155981 155989 155988 ATACACAGCACTAAC GCGC TTA GCGC TATTAAACCTGATGG HP0144 156334 - 157800 + | cytochrome c oxidase, heme b and copper-binding subunit, membrane-bound (fixN) HP0145 157813 - 158511 + | cytochrome c oxidase, monoheme subunit, membrane-bound (fixO) HP0146 158519 - 158740 + | cbb3-type cytochrome c oxidase subunit Q (CcoQ) HP0147 158742 - 159602 + | cytochrome c oxidase, diheme subunit, membrane-bound (fixP) HP0148 159630 - 159836 + | hypothetical protein TERM 140 160249 - 160229 - g 81 -5.5 -5.03715 | ATGACGCTCAAAAAA TAGAATTAG TGG CTAACCCTA AAGATTTGTTAGACA HP0149 159937 - 160521 + | hypothetical protein HP0150 160534 - 161124 + | hypothetical protein TERM 141 161117 - 161131 + F 76 -7.2 -4.33739 | opp_overlap 161117 161116, overlap 161129 CTTTTTTCAAGCAAC GCATTT AAA AAATGC TTTTAGCGTTTTTTA TERM 142 161129 - 161139 + F 74 -3.2 -5.45652 | opp_overlap 161117 161116, overlap 161117 AACGCATTTAAAAAA TGCT TTT AGCG TTTTTTATTGGCACT TERM 143 161897 - 161913 + G 86 -8.1 -4.84311 | overlap 161905 TCTTTTATGGGGGGT GGATTTT TTA AAAATCC TTTTATTGTATGGGA HP0151 161157 - 161969 + | hypothetical protein HP0152 162829 - 161966 - | hypothetical protein recA 162928 - 163971 + | recombinase A eno 163983 - 165263 + | phosphopyruvate hydratase TERM 144 165481 - 165494 + G 79 -6.7 -4.50159 | opp_overlap 165470, overlap 165487 CAAAGCAAGAATGTG CGCTT GCAA AAGCG TTTGTTTGAGTTGAA HP0155 165256 - 165531 + | hypothetical protein HP0156 165543 - 166145 + | hypothetical protein aroK 166150 - 166638 + | shikimate kinase HP0158 166660 - 167616 + | hypothetical protein HP0159 168731 - 167613 - | lipopolysaccharide 1,2-glucosyltransferase (rfaJ) TERM 145 167867 - 167842 - G 93 -9.9 -4.90906 | gap 1 TTAGAATATGAAAAA GTAGGTAAAACC CAA GGTTTT-CCTAC AAAATAAAAATGCAG TERM 146 168745 - 168755 + H 74 -5.4 -4.78764 | ATTTTAAGCGGTTTC CCTA AAA TAGG TTTTTAATCAATTTA TERM 147 169236 - 169226 - g 89 -5.4 -5.40072 | opp_overlap 169226 TGGTGTGCAAAAAAA CCTT CCA AAGG CTATCTATTATTACA HP0160 168882 - 169802 + | hypothetical protein TERM 148 170138 - 170123 - f 77 -7.6 -4.12942 | TCAAACTCTGTAAAA TCCCTA TGAT TAGGGA CGCAGAGTGAGAACC TERM 149 170205 - 170182 - g 85 -12.4 -3.1739 | overlap 170173 ACATCAGCCTAGGAA GCCCAATCGC TTTA GCGTTTGGGC GCTTCACAATAAATA HP0161 170145 - 170255 + | hypothetical protein TERM 150 170438 - 170389 - T 85 -8.4 -4.61482 | gap 1, overlap 170427 170428 TTTTTTAAAAAAGAA TATTGAATAAAGCTTTCATGTTT GAACA AAACA-AAAACCTTTATTCAATA AAATAAGGTTAAAAT TERM 151 170603 - 170618 + T 77 -7.6 -4.12942 | GGTTCTCACTCTGTG TCCCTA ATCA TAGGGA TTTTACAGAGTTTGA HP0162 171426 - 170704 - | hypothetical protein HP0163 172398 - 171427 - | delta-aminolevulinic acid dehydratase TERM 152 172062 - 172080 + g 80 -4.6 -5.28755 | opp_overlap 172062 ACAAATCCGCTATAA CGATTAAA TCC TTGAATCG TTTTTTAATCTCTTT HP0164 173234 - 172470 - | signal-transducing protein, histidine kinase HP0165 173752 - 173231 - | hypothetical protein HP0166 174455 - 173778 - | response regulator (ompR) TERM 153 174613 - 174653 + r 71 -2.2 -5.38348 | gap 1, opp_overlap 174636, overlap 174634 174636 TTATTAATGGAAATT TAAGGCTTTG-TTTTCA TGGAATAT TGAAAAATAAAGTCTTA TTTTTTAATGTTTTT TERM 154 174634 - 174663 + r 71 -5.3 -4.59853 | opp_overlap 174636, overlap 174613 174636 174662 TTTGTTTTCATGGAA TATTGAAAAATAA AGTC TTATTTTTTAATG TTTTTAAACAATTCC HP0167 175164 - 174691 - | hypothetical protein TERM 155 174961 - 174979 + g 74 -3.8 -5.1287 | TGTGATTTTTTCTTG CGTTTCTA TTT TAGCAGCG TTTTTTGGCTCTAAA TERM 156 175092 - 175103 + g 73 -2.2 -5.22943 | CAAAGTTATTATCAA TGGT TTTA GCCA TTTTTTCAATTTCAT HP0168 175406 - 175143 - | hypothetical protein HP0169 176721 - 175453 - | collagenase (prtC) HP0170 177485 - 176724 - | hypothetical protein prfB 178651 - 177560 - | peptide chain release factor 2 TERM 157 178602 - 178590 - G 70 -7.7 -3.78775 | opp_overlap 178590 178589 GGCTTGATGATTAAA GCGAT ATT ATCGC ATTTGTTTTGCAAGC HP0172 179887 - 178712 - | molybdopterin biosynthesis protein (moeA) fliR 180664 - 179897 - | flagellar biosynthesis protein FliR TERM 158 180288 - 180298 + g 79 -6.8 -4.63527 | AATAAAAGGGCTTGC CCCA CAA TGGG TTTTTGCGATCCTGA HP0174 181434 - 180658 - | hypothetical protein TERM 159 181564 - 181550 - H 80 -7.8 -4.18443 | TATAAAGAATAATAA CCCTGG TAA CCAAGG AAAGAGAATGCATAC HP0175 181865 - 182764 + | cell binding factor 2 HP0176 182781 - 183704 + | fructose-bisphosphate aldolase TERM 160 184103 - 184117 + G 70 -7.8 -3.62591 | GATTTCAGTGGATGT GCCGCA AGT TGTGGC TTTAAAGATTGTAGA HP0177 183726 - 184289 + | elongation factor P HP0178 185820 - 184798 - | sialic acid synthase HP0179 186465 - 185824 - | ABC transporter, ATP-binding protein TERM 161 186241 - 186259 + g 74 -9 -3.55761 | TTTTAAGCGCCGTAA TTCCAAAA GCT TTTTGGAA TTTAAGGCATAAATA HP0180 187739 - 186462 - | apolipoprotein N-acyltransferase TERM 162 187040 - 187056 + g 73 -8.7 -3.75884 | CAATCAAGGTTTTTT GCTTGCT TTG AGCGAGC TTGATTTCTTTAAGA HP0181 187997 - 188671 + | hypothetical protein TERM 163 189927 - 189909 - g 78 -7.5 -4.46112 | TCGCAGGGAAAGAAA TCGCTAA CGGCT TTAGCGA GTTGAACGATCCTTT lysS 188681 - 190186 + | lysyl-tRNA synthetase TERM 164 191224 - 191211 - g 85 -6.7 -5.07486 | CACCGTGAATAAAAA CACCA TTCC TGGTG AAACGCGCAGCCCTT glyA 190186 - 191436 + | serine hydroxymethyltransferase HP0184 191447 - 191989 + | hypothetical protein HP0185 192011 - 192814 + | hypothetical protein TERM 165 193171 - 193192 + T 88 -8.8 -4.36262 | opp_overlap 193171 TGGGGCTAGAAGCAA GAGAGTGA GTGCGA TCACTCTC TTTTAATCTCACTCT TERM 166 193192 - 193171 - T 76 -8.8 -3.44146 | opp_overlap 193171 TGGGGCTAGAAGCAA GAGAGTGA GTGCGA TCACTCTC TTTTAATCTCACTCT HP0186 194424 - 193210 - | hypothetical protein TERM 167 193285 - 193297 + g 79 -3.4 -5.36441 | TCTTTTTACCAATGC CTTC TTATT GAAG TTTTTTGTATCAAAG HP0187 194738 - 194451 - | hypothetical protein HP0188 194900 - 194799 - | hypothetical protein HP0189 195057 - 195590 + | hypothetical protein HP0190 197104 - 195596 - | hypothetical protein TERM 168 196858 - 196869 + g 76 -4.4 -5.12617 | TATAGATATAAGTTT GCAT GTCA ATGC TTTTTTGGCTCATTC sdhB 197863 - 197126 - | fumarate reductase iron-sulfur subunit HP0192 200000 - 197856 - | fumarate reductase flavoprotein subunit TERM 169 199047 - 199058 + g 75 -5.8 -4.7173 | CCCATAAGGCGATTT GGCT CCAT AGCC TTTTTGGATATGCTC HP0193 200777 - 200010 - | fumarate reductase cytochrome b-556 subunit TERM 170 200293 - 200277 - G 70 -5.9 -4.46854 | overlap 200272 ATACAAAAGCCAAAA GTTTTGC GTT ACAAAAC GATAGCTTGAACCAT tpiA 200992 - 201696 + | triosephosphate isomerase HP0195 201706 - 202533 + | enoyl-(acyl carrier protein) reductase lpxD 202543 - 203553 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 171 203694 - 203676 - g 74 -6 -4.38712 | opp_overlap 203689, overlap 203678 203689 GGCATCCTGACAAAA TGGCTGAT CAA ATCAGCGA TGCGGTTTTAGATTA TERM 172 203938 - 203919 - g 73 -8.6 -3.72576 | opp_overlap 203912 GCGTTGGCGAGCAAA GCCCTGAT ATTA ATCAAGGC GTGGATAGAGAAGAT HP0197 203618 - 204775 + | S-adenosylmethionine synthetase TERM 173 205220 - 205231 + G 70 -3 -5.03314 | opp_overlap 205220 GAAAACGCACACAAT GAAA TCGC TTTC TTTTTTGCCGCTAGA HP0198 204842 - 205255 + | nucleoside diphosphate kinase (ndk) TERM 174 205546 - 205564 + G 70 -3.2 -4.84642 | overlap 205547 205549 205558 TTGATAATTTAGATG TTATTGAA TCT TTCAATGG TTTTATTGATTTGAG HP0199 205281 - 205637 + | hypothetical protein rpmF 205653 - 205799 + | 50S ribosomal protein L32 HP0201 205874 - 206890 + | putative glycerol-3-phosphate acyltransferase PlsX HP0202 206915 - 207910 + | 3-oxoacyl-(acyl carrier protein) synthase III HP0203 207932 - 208207 + | hypothetical protein TERM 175 208778 - 208792 + T 70 -4.3 -4.87626 | opp_overlap 208776 208788 TTACAAGAAGCTATC GTTTG CTAAA CAAAC TTTTTGATATTAAAA TERM 176 208873 - 208859 - T 91 -7.2 -5.22006 | CCATTAGAACAAAAA CCAAAT TTT ATTTGG AAAATTTATGGTAAT HP0204 209249 - 208866 - | hypothetical protein HP0205 211646 - 209265 - | hypothetical protein TERM 177 209945 - 209956 + g 74 -4.4 -4.85782 | opp_overlap 209945 AATGATTCTTAATCA CAGA GCCT TCTG TTTCTTTTTCCACAA TERM 178 210398 - 210424 + g 79 -5.4 -4.89009 | overlap 210408 TCGCTAAAAGCTTAT TAAATTCTTT TGTGATT AAAGAATTTA TTTTTAATTGCATGT TERM 179 211187 - 211201 + g 73 -2.2 -5.27023 | TTTTTTCAAGGTATT TTAAAG AAT TTTTAA TTTTCTTTTTAAGGT TERM 180 211303 - 211325 + g 76 -7 -4.40358 | TCTTTAATAATGTCC TTCACTTCAG TTT CTGGTGTGAA TTTTGTAAAGTCGGT HP0206 212176 - 211850 - | hypothetical protein HP0207 212141 - 213379 + | ATP-binding protein (mpr) TERM 181 213388 - 213403 + FH 80 -7.6 -4.28548 | opp_overlap 213388 GCATTAGTTTAAAAA GGGTTT TAAA AAACCC TTTTAATCAGTCGCT TERM 182 213403 - 213388 - fH 82 -7.6 -4.63527 | opp_overlap 213388 GCATTAGTTTAAAAA GGGTTT TAAA AAACCC TTTTAATCAGTCGCT TERM 183 213625 - 213665 + FH 71 -8.3 -3.23611 | opp_overlap 213622 213650, overlap 213638 TGATCTAAAAAAGAA GCGTTGAAATAGGCGTCTT TAA AAGGCGTTTGGATCAACGC TTCATGCCATTTTTT TERM 184 213888 - 213863 - fH 72 -4.9 -4.87803 | opp_overlap 213866, overlap 213864 GATCGTTAAATAAAA GTTTTTCATTT TTCA AAATGAAAAAG GTAATCAATTGGTTT TERM 185 213887 - 213864 - fH 73 -8.4 -3.51958 | opp_overlap 213866, overlap 213863 ATCGTTAAATAAAAG TTTTTCATTT TTCA AAATGAAAAA GGTAATCAATTGGTT TERM 186 214644 - 214654 + FH 100 -5.4 -6.69613 | overlap 214621 AAAGGGGGTTTTTTG CGAT TTT ATCG TTTTTTTTTTTCTAC HP0209 214745 - 216097 + | hypothetical protein HP0210 216201 - 218066 + | heat shock protein 90 TERM 187 218067 - 218077 + T 74 -6.8 -4.17089 | opp_overlap 218075, overlap 218075 TTGAAAGCGTTGTAG GGGT AAA ACCC TTTTAAGGGTTTGAA TERM 188 218229 - 218255 + T 73 -8 -3.37612 | opp_overlap 218229, overlap 218233 ATAAAAAGCGTAAAA GCCAGCTAAACG CAG CGTTTAGCTAAC TTCATTGAAATTAAA TERM 189 218255 - 218229 - T 100 -12.4 -4.32233 | opp_overlap 218229 218233 ATAAAAAGCGTAAAA GCCAGCTAAACG CAG CGTTTAGCTAAC TTCATTGAAATTAAA TERM 190 218233 - 218251 + T 87 -11.8 -2.60423 | opp_overlap 218229, overlap 218229 AAAGCGTAAAAGCCA GCTAAACG CAG CGTTTAGC TAACTTCATTGAAAT HP0211 219018 - 218266 - | hypothetical protein HP0212 220249 - 219098 - | succinyl-diaminopimelate desuccinylase TERM 191 219523 - 219563 + g 72 -8.6 -3.55368 | gap 1, opp_overlap 219536 ACCCTGCATGCAAGT TGGTGATGACTAATTTTGA AGGG TCAAAAT-ATTCATCGCCA TTGTCTAAATTAACT HP0213 222124 - 220259 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 192 221604 - 221621 + g 71 -6.3 -4.30576 | opp_overlap 221595, overlap 221594 TTAGAAGCGTTTTCC CCAAAGC GCCC GTTTTGG TTTTGGTGCTCGCCA TERM 193 221670 - 221680 + g 81 -5.4 -5.14477 | AAAAAAGTGCCTGTG GTGA TGA TCAC TTTTTTAGCTCTATA HP0214 222220 - 223878 + | sodium-dependent transporter (huNaDC-1) HP0215 223891 - 224691 + | CDP-diglyceride synthetase (cdsA) TERM 194 225226 - 225214 - g 70 -9.1 -3.10775 | overlap 225213 225223 ATTCCTATTCAAAAC GCGCA AAA TGCGC TCAAGCACCCTAATT HP0216 224692 - 225798 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 195 226573 - 226563 - g 74 -4 -5.06451 | opp_overlap 226563 TATGACGCTAAAAAA CTTT ATG AAAG TTTTTATATCCCTAA TERM 196 226563 - 226573 + G 71 -4 -4.99035 | opp_overlap 226563 TATGACGCTAAAAAA CTTT ATG AAAG TTTTTATATCCCTAA HP0217 225849 - 226991 + | hypothetical protein HP0218 227558 - 227007 - | hypothetical protein TERM 197 227667 - 227649 - H 71 -7.6 -3.4178 | opp_overlap 227652 227666, overlap 227652 AGCATGGTATTAGAA TAATCATT TTT AATGATTA AATAGCTATTTATTT HP0219 227686 - 228165 + | hypothetical protein TERM 198 228787 - 228772 - g 86 -4.6 -5.39721 | opp_overlap 228773, overlap 228773 CGATCACAGAAAAAA CCGCTC TAGT GAGCGT GATGTGGGCGAATAA TERM 199 228786 - 228773 - g 73 -8.1 -3.82748 | opp_overlap 228773, overlap 228772 GATCACAGAAAAAAC CGCTC TAGT GAGCG TGATGTGGGCGAATA HP0220 228339 - 229502 + | cysteine desulfurase HP0221 229524 - 230504 + | nifU-like protein HP0222 230651 - 230872 + | hypothetical protein TERM 200 231178 - 231166 - g 72 -3.3 -5.11033 | CACAAGCGCAAAAAA GCGTT TCT ATCGC TGCAATTGAGCATGA TERM 201 231347 - 231321 - g 75 -8 -4.07687 | overlap 231304 231322 ACTCTGCTTTTAAAA GTGGCTTCTGGC TTA GCCAAAAACCAG CAGAAGGTTTTGTAT TERM 202 231346 - 231322 - g 81 -11.5 -3.04398 | overlap 231304 231321 CTCTGCTTTTAAAAG TGGCTTCTGGC TTA GCCAAAAACCA GCAGAAGGTTTTGTA TERM 203 231825 - 231839 + G 81 -2.8 -5.60993 | opp_overlap 231825 TTGGTGAGCGCTAAA GAAGCT TCA AGCTTG TTTTTTTCTAAAGAA HP0223 230973 - 232343 + | DNA repair protein RadA HP0224 232467 - 233546 + | bifunctional methionine sulfoxide reductase A/B protein TERM 204 233574 - 233562 - f 79 -10.5 -2.56164 | overlap 233561 233557 GGGGTAATGACTAAG CCCCC TAA GGGGG GTTAAAATGAGGGGT HP0225 233581 - 233649 + | hypothetical protein TERM 205 233741 - 233759 + T 81 -4 -5.58051 | AGCTTTTTAACTTTT TTAAAAAT GGG GTTTTTAA TTTTATTTTTTGTTT HP0226 234762 - 233929 - | hypothetical protein TERM 206 234439 - 234427 - G 73 -7.7 -3.89524 | overlap 234413 AGCGTATTTGATAAA GGTGT AGC ACACC ACCACCACAAACACC TERM 207 234717 - 234700 - G 78 -4 -5.28683 | overlap 234701 ACCAATACCAAAAAA CCCGGC GGTAAT GCCGGT GAATAGCCCCACAAG HP0227 237048 - 234973 - | outer membrane protein (omp5) TERM 208 236713 - 236691 - G 70 -2.7 -5.12068 | gap 1, opp_overlap 236648 CACAGCCAATAAAAA GGGC-TATGA CTTG CCACATGCCC ACAGCGGCATTGAGC HP0228 237297 - 238469 + | hypothetical protein TERM 209 238659 - 238673 + T 82 -8.6 -4.02424 | CGTTATTCATTGAGA GCCAAA AAG TTTGGC TTTGTCCTCATTAGT HP0229 240159 - 238708 - | outer membrane protein (omp6) TERM 210 238893 - 238909 + g 70 -8.7 -3.4158 | TGGTGTTGTTGATCT TAGCGCT GTA GGCGCTA TTGGTGGTTTTTAAA TERM 211 239608 - 239583 - G 77 -6.1 -4.56775 | opp_overlap 239586, overlap 239586 AGGTGTTGCCAAAAA TATTGCATGCG TTCC CGCTTGCATTA ATGCCCCATGGTTTG TERM 212 240270 - 240290 + r 95 -5.5 -6.17292 | opp_overlap 240270 TTTTAATAAAATTGA GCAAAAATT AAG AAATTTTGC TTTTTTTTTGGATTT TERM 213 240290 - 240315 + r 72 -4.9 -4.77036 | AATTAAGAAATTTTG CTTTTTTTTTG GATT TAAAAAAAAGG TTTTTGATAGTGAAA HP0230 241085 - 240354 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 214 241633 - 241643 + G 70 -5.4 -4.3277 | opp_overlap 241633 TAACGCTGCAAATAA GGAT AAA ATCC TTTATATTGTCTCTG HP0231 241193 - 241990 + | hypothetical protein TERM 215 242133 - 242111 - g 71 -7 -3.96892 | opp_overlap 242117, overlap 242117 AATGCTGATGACAAA CCAAAAGAGC AAA GCTCTTTAAG TCAAAGCGTTCAAAA TERM 216 242127 - 242117 - g 79 -6.8 -4.63479 | opp_overlap 242117, overlap 242111 GATGACAAACCAAAA GAGC AAA GCTC TTTAAGTCAAAGCGT HP0232 242006 - 242653 + | hypothetical protein TERM 217 242987 - 243002 + G 70 -9 -3.16676 | overlap 242979 242985 TTGATTTGGCCGGGG GGCTTG ATGG CAAGCC TATTAAATTACTGGA TERM 218 243247 - 243257 + G 84 -6.8 -5.00616 | opp_overlap 243246 243244 243247 AATATTGAAGAAGAG CGCA CCA TGCG TTTTTTGCAAGACGC HP0233 242677 - 243849 + | hypothetical protein TERM 219 244224 - 244236 + G 71 -6.3 -4.21787 | GCTAAGGTGGGCGTT GTGTT TAA AACAC TTTTGGGGATTTTTT HP0234 243849 - 244379 + | hypothetical protein TERM 220 244963 - 244938 - T 70 -4.1 -5.11937 | overlap 244940 AACAACCGCAAAAAA CATTCAAAAAG TTTT CTTTTTGAAAA TAGACAAAACCCTAA TERM 221 244961 - 244940 - T 88 -8.9 -4.17355 | overlap 244938 CAACCGCAAAAAACA TTCAAAAAG TTTT CTTTTTGAA AATAGACAAAACCCT HP0235 246165 - 245098 - | hypothetical protein TERM 222 245160 - 245179 + g 72 -3.6 -5.13648 | overlap 245161 CTAGCTTACAGCCCT TGTCATAA ATCA TTATGGCG TTTTCTTTGTCTTTC HP0236 246629 - 246258 - | hypothetical protein TERM 223 246423 - 246446 + g 72 -4.6 -4.77036 | gap 1, overlap 246442 ATGGTTGATTTTAGG GGCGTAGAGGA TTT TTTTCT-CGCC TTTTTCATAATAAAA TERM 224 246442 - 246466 + g 71 -5.1 -4.57882 | overlap 246423 TAGAGGATTTTTTTC TCGCCTTTT TCATAAT AAAAGGTGA TTTCTTGTTGTTCGC hemC 247549 - 246629 - | porphobilinogen deaminase HP0238 249293 - 247560 - | prolyl-tRNA synthetase TERM 225 248800 - 248827 + g 72 -10 -2.55213 | overlap 248797 AAGCTCTCAGCGTCT TCATGAAAGCTG TAAC CATCTTTCATGA TAAATTCCCTCGCTC hemA 250646 - 249297 - | glutamyl-tRNA reductase TERM 226 249516 - 249530 + g 80 -6.4 -4.7153 | opp_overlap 249516, overlap 249509 TTCTTTAGGCACATA GCGTTT TTT AAGCGC TTTTTGCAATTCTTT TERM 227 250037 - 250052 + g 91 -6.1 -5.38249 | GAGCCATCTCGCCAA GCCCT ATCACA AGGGC TTTTTTATCCTTAAT HP0240 251569 - 250646 - | octaprenyl-diphosphate synthase (ispB) HP0241 251974 - 251579 - | hypothetical protein HP0242 252251 - 251967 - | hypothetical protein TERM 228 252125 - 252155 + g 70 -2.8 -5.01732 | gap 2, opp_overlap 252125 252134, overlap 252145 TAAAAGTTTCCAAGA GAGCTA-AAAG-CT CTAAA AGCCTTTCTAGCTC TTTTTTAGAAAGCTT HP0243 252706 - 252272 - | neutrophil activating protein (napA) (bacterioferritin) HP0244 254057 - 252912 - | signal-transducing protein, histidine kinase (atoS) TERM 229 253130 - 253116 - G 70 -5.8 -4.46675 | opp_overlap 253124 AGTGAAGACAATAAA TTCATT TTG AATGAA CGCTTCAATCTTCAC TERM 230 253617 - 253639 + g 70 -2.7 -5.17488 | TTGCTTGCCTTGAAT GCTGTTTTG CTGGA CTAAATAGC TTTTATTTTCATGTT HP0245 254371 - 254054 - | hypothetical protein flgI 255396 - 254368 - | flagellar basal body P-ring protein TERM 231 254438 - 254453 + g 76 -3.2 -5.25803 | ATTGAAACCATCCCC TTAGCG CTCA CGCCAA TTTTTTGTAAGGCTT TERM 232 256163 - 256173 + G 70 -3.2 -5.00616 | overlap 256153 CCTCCCTAGCGAAGC GCAG ATT TTGC TTTTTTCAGCCACGA TERM 233 256420 - 256389 - g 74 -3.8 -5.14965 | gap 1, opp_overlap 256397 256398 ACGCGCACTAAAAAA GAAGCCGATGAATTG CAC CAATTCCTTG-CTTC TAAAAATTACAAAAG TERM 234 256981 - 256966 - g 88 -3.9 -5.7946 | opp_overlap 256977 CCTCTAACAAAAAAA CGCCC CAACAT GAGCG AGCGCGTTCTTTCAA HP0247 255585 - 257063 + | DEAD-box ATP dependent DNA helicase TERM 235 257134 - 257122 - g 100 -6.3 -5.75538 | TTTAAAAAAGAAAAA TTCTC AAA GAGAA ACCCCCACGCCTAAT HP0248 257084 - 258172 + | hypothetical protein HP0249 258179 - 258718 + | hypothetical protein HP0250 260351 - 258801 - | oligopeptide ABC transporter, ATP-binding protein (oppD) TERM 236 259091 - 259072 - G 79 -10 -3.55563 | ATTTTAGGTTTTAAA GCAATCGC TCTA GCGATCGC CACTCTTTGGCGTTC TERM 237 259995 - 260007 + g 71 -4.1 -4.95155 | TTGTTCTTTAAGGAG CGTTT TAG AAGCG TTTTTATAGTGTAAA HP0251 261377 - 260361 - | oligopeptide ABC transporter, permease protein (oppC) HP0252 261719 - 263182 + | outer membrane protein (omp7) HP0253 263195 - 263311 + | hypothetical protein TERM 238 263635 - 263625 - g 89 -6.8 -5.24551 | TGAAACGAATAAAAA CGCT TAT AGCG TTCAAGCCTTGCAAG TERM 239 263863 - 263851 - g 83 -9.1 -4.07568 | TCGGTGTTTTTAAAA GGGCT ATT AGCCC AAATGCAGCTTTTTA HP0254 263314 - 264609 + | outer membrane protein (omp8) HP0255 264709 - 265944 + | adenylosuccinate synthetase TERM 240 266019 - 266006 - g 79 -6.7 -4.50259 | opp_overlap 266006 266005 AAAAATAGAGCAAAA GCTTG AAAG CAAGC GTTTAGAATTGCAAC HP0256 265941 - 266369 + | hypothetical protein TERM 241 266619 - 266607 - g 77 -4.9 -4.93595 | AGAAAAACTGAAAAA TTTAG CCG CTAAA GAAGAAGCCTTTAAA HP0257 266362 - 267021 + | hypothetical protein TERM 242 267294 - 267280 - g 70 -2.8 -5.03314 | GCTATGCGCAAAAAA GCCCTT TTC AAAAGC TATGGATACTATTTG HP0258 267021 - 268067 + | hypothetical protein TERM 243 268676 - 268664 - g 79 -3.3 -5.39721 | opp_overlap 268664, overlap 268657 TCATGACACAAAAAA CGCTT TTG ATGCG ATTGTAGTGGCTAGG xseA 268080 - 269342 + | exodeoxyribonuclease VII large subunit HP0260 270532 - 269378 - | adenine specific DNA methyltransferase (mod) HP0261 270923 - 270525 - | hypothetical protein TERM 244 271570 - 271554 - g 77 -10.9 -2.8806 | opp_overlap 271553 271554 AAATTCGTTTAGAGA GCGTTTC ACA GAAACGC CTTATTGGAAATTAA TERM 245 271554 - 271570 + G 77 -10.9 -2.78867 | opp_overlap 271554, overlap 271553 AAATTCGTTTAGAGA GCGTTTC ACA GAAACGC CTTATTGGAAATTAA HP0262 271081 - 271683 + | hypothetical protein TERM 246 271859 - 271871 + G 70 -2.7 -5.06735 | opp_overlap 271859, overlap 271853 271859 TCAGCGTTTTAGAGA CTTTT GAA AAAGG TTTTTATGATTTATG TERM 247 272196 - 272224 + G 76 -3.2 -5.24129 | gap 2, overlap 272197 272198 AGCTAGCGCGCCCTA TG-CGATCG-CTCC TGT GGAGTTGATCGTCG TTTTTTATAAAAACG HP0263 271795 - 272553 + | adenine specific DNA methyltransferase (hpaim) TERM 248 274367 - 274351 - g 90 -8.7 -5.08601 | overlap 274364 GTAGGGCAAGAAAAA GCGATCA AAG CGATCGC TAAAGCGATTAAAAG HP0264 272626 - 275196 + | ATP-dependent protease binding subunit (clpB) TERM 249 275551 - 275562 + G 76 -4.4 -5.01042 | ATTATATCGCTGGGG GGAT TGTG ATCC TTTTTGGTTTGCATT HP0265 275250 - 275972 + | cytochrome c biogenesis protein (ccdA) TERM 250 276041 - 276030 - g 71 -7.2 -3.92577 | overlap 276028 GAAGTTTTAAAAAGA GCGG ATAT CCGC TTAAAAGATTCCCTC TERM 251 276327 - 276340 + G 74 -3.7 -5.03715 | GGGGAAATTTTAATC GCGCC ATCT GACGC TTTTTTAGAACTCAT HP0266 275982 - 277118 + | dihydroorotase (pyrC) HP0267 277103 - 278332 + | chlorohydrolase HP0268 278393 - 278635 + | hypothetical protein HP0269 278645 - 279958 + | putative ATP-binding protein HP0270 280163 - 280651 + | hypothetical protein TERM 252 281038 - 281050 + G 87 -3.4 -5.79595 | opp_overlap 281018 281038 TTAAGCGTTTTAAAA TCCA GGATG TGGA TTTTTTGTTTTCGCC TERM 253 281128 - 281144 + G 76 -2.3 -5.47846 | overlap 281130 CGTTGTTGTATTTGC TTTTGGA GCG TTCAAGA TTTTATTTTTTGATT HP0271 280644 - 281627 + | hypothetical protein HP0272 281617 - 282150 + | hypothetical protein TERM 254 282196 - 282219 + G 76 -2.4 -5.4477 | overlap 282197 AGCAATCAGGCGATG TGGGGTTTAT CATT AAAAACCTCG TTTTTTTAGGGGTTT TERM 255 282343 - 282328 - g 79 -3.2 -5.51165 | AAAATCGTAAAAAAA GCGTTT TAGA ATACGC GCAAAGGCATTTTGA HP0273 282147 - 282686 + | hypothetical protein HP0274 282703 - 283101 + | hypothetical protein HP0275 283138 - 284430 + | ATP-dependent nuclease (addB) TERM 256 284654 - 284666 + G 71 -6.9 -4.06903 | ATTATACGAAATAGG CGCGC CAA GCGTG TTTAATTTAGAAGTT HP0276 284418 - 284975 + | hypothetical protein HP0277 285032 - 285286 + | ferredoxin TERM 257 285768 - 285743 - g 73 -5.5 -4.65895 | opp_overlap 285744, overlap 285744 GCGTTGATTGAAAAA GGCAAGATTAA GGAC TTAATCTCGCT TGATGTTGGGACGAT TERM 258 285767 - 285744 - g 72 -9 -3.39216 | opp_overlap 285744, overlap 285743 CGTTGATTGAAAAAG GCAAGATTAA GGAC TTAATCTCGC TTGATGTTGGGACGA TERM 259 285893 - 285883 - g 73 -2.4 -5.19879 | CTTTAAACACAAAAA CGCC TTT GGGG TGGGGGGGACGATCA HP0278 285296 - 286750 + | guanosine pentaphosphate phosphohydrolase (gppA) TERM 260 287225 - 287206 - g 82 -8 -4.57341 | opp_overlap 287210, overlap 287210 AACTTGCCCCAAAAA GAAATTTC AAAA GAAATTTC AGAGAGCTTAAGCTC HP0279 286747 - 287769 + | lipopolysaccharide heptosyltransferase-1 (rfaC) HP0280 287766 - 288752 + | lipid A biosynthesis lauroyl acyltransferase tgt 289967 - 288852 - | queuine tRNA-ribosyltransferase TERM 261 288970 - 288958 - G 76 -3.4 -5.27938 | AGCTCTAAATAAAAA TGCA AATTG TGCA AGCTGGCCAAACGAG TERM 262 290830 - 290818 - g 73 -7.7 -3.83324 | opp_overlap 290818 GCACAAACATTTAAA GAGCT ACA AGCTC TACATTCAGGTTTTA HP0282 290018 - 291460 + | hypothetical protein TERM 263 291963 - 291949 - g 73 -5.7 -4.57073 | opp_overlap 291948, overlap 291951 TAGCTTTTTTAAAAA CCCTT GAAAA AAGGG AATTTCAAGCAGGGG aroB 291465 - 292496 + | 3-dehydroquinate synthase TERM 264 292864 - 292880 + G 71 -5.1 -4.56702 | TATCGCTAACCCTAT TGCGATC ATT GATGGCA TTTCTTTCATTAAGA HP0284 292487 - 294058 + | hypothetical protein TERM 265 294362 - 294383 + G 89 -4.5 -5.64274 | AAGAAAAGATTAACG CGCTTTT ACAAGAAA AAAAGCG TTTTTTTATAGATGA TERM 266 294697 - 294676 - g 81 -5.9 -5.1675 | CGATTGATTAAAAAA TTAAGCCAG ATCG CTGGATTAA AACGCATAAGGATTG HP0285 294055 - 295311 + | hypothetical protein TERM 267 295744 - 295776 + G 71 -6.4 -4.14472 | gap 2, opp_overlap 295739 AAACGAATTAGAAAA CGCATTCC-AGCG-AT ACG ATGCGCTAGGGGTGCG TTTTGAAGATATTGC TERM 268 296044 - 296024 - g 84 -6.9 -5.00616 | overlap 296025 GCTGGGGCTAAAAAA GTGCATGAA CTT TTCATGCAT GCTAAAAGGCATGCC TERM 269 296043 - 296025 - g 79 -10.4 -3.60048 | overlap 296024 CTGGGGCTAAAAAAG TGCATGAA CTT TTCATGCA TGCTAAAAGGCATGC TERM 270 296463 - 296451 - g 73 -7.7 -3.81428 | opp_overlap 296450, overlap 296438 ACCAACGAACCGAAA TCGCT GAG AGCGA CATTTTAGAAGTGAA TERM 271 296562 - 296537 - g 73 -5.5 -4.62313 | gap 1, overlap 296540 296541 296556 GAAAACCAAAAAGAA TTAGTCGCTTTG TAT CAAAGCG-CGAA AGCCTTGAGCGCGTA HP0286 295298 - 296950 + | cell division protein (ftsH) TERM 272 297237 - 297251 + G 73 -7.1 -4.07568 | AGAAGTGGGCTTGAG CGCTC AATTG GAGCG TTTTAAAAAAGAGGG HP0287 296953 - 297471 + | hypothetical protein TERM 273 297841 - 297826 - g 79 -6.8 -4.64657 | gap 1, opp_overlap 297838, overlap 297816 TTAAACGCTCAAAAA GCG-GGC GAA GCCGCGC TTCAAAGTGCTGAAT HP0288 297484 - 297957 + | hypothetical protein TERM 274 301780 - 301805 + G 79 -5.5 -4.83615 | overlap 301782 GGCGGTAACCCTAAT TTCAGTTTCAA CGCT TTGAATCTGGA TTTTTCTAACAGCTC TERM 275 302466 - 302454 - g 70 -7.7 -3.70919 | opp_overlap 302453 TTTAAACCCTAACAA CAGCA GCG TGCTG GATTTAAAAAACAGC TERM 276 304658 - 304636 - g 71 -9.8 -2.7976 | overlap 304635 GCTAATATTGCAAAC CCTTGCGCGC TTA GCGCCCAAAG CACGAATGGCGCTTC TERM 277 305645 - 305631 - g 70 -2.8 -5.09895 | overlap 305632 GATTTATTTAAAAAA CCACTC TTT GAATGA AATCTTAGGCGTAAC HP0289 298024 - 306705 + | toxin-like outer membrane protein TERM 278 306799 - 306829 + G 75 -2.6 -5.1925 | overlap 306800 306828 ACAAAACCCCTTTTT ACCTCTATGATTTT GAC AAAATCAAACAGGC TTTTTTGAATTATAA TERM 279 307119 - 307105 - g 77 -8.6 -3.82604 | TTATGGAATTAACAA CGATTG AAA CAATCG CTCAATCTTTAGGGA HP0290 306753 - 307970 + | diaminopimelate decarboxylase (dap decarboxylase) (lysA) HP0291 307975 - 308265 + | hypothetical protein TERM 280 308988 - 308968 - g 80 -6.1 -4.71061 | overlap 308945 308943 ATCCACATTGAAAAA GCCCGCA CAGATAT TGCAGGC GCGTATCAGATCATC HP0292 308278 - 309150 + | hypothetical protein TERM 281 309579 - 309590 + G 70 -5.8 -4.37886 | opp_overlap 309579 309578 ACACAACCAAAACAC GCCT TTTA AGGC TTTTATAGAAAATGA TERM 282 310039 - 310027 - g 74 -4.7 -4.89393 | opp_overlap 310027 310027 GAAAGTTTAGAAAAA CGCCC TAG GGGGG TGTATTGCGGGGCGA HP0293 309151 - 310830 + | para-aminobenzoate synthetase (pabB) amiE 311023 - 312042 + | acylamide amidohydrolase flgL 314631 - 312145 - | flagellar hook-associated protein FlgL TERM 283 313109 - 313127 + g 78 -3.8 -5.27779 | CTTTCTAATTTTGCC CCTTCTTT ATT GAAGTAGG TTTTTTGGTATTCGC TERM 284 313276 - 313293 + g 74 -4.1 -5.15634 | overlap 313278 TTCAATTTCCACATC CACTTCA TTAT TGAAGCG TTTTTTGATCGCGTC TERM 285 313777 - 313806 + g 82 -10.9 -3.54129 | AGTGTTCCCGTAAGC GTGAGCGATTT TATCCAAC AAATCGCTCAC TTTAGAGGCACTCTC rplU 314873 - 315187 + | 50S ribosomal protein L21 rpmA 315202 - 315468 + | 50S ribosomal protein L27 TERM 286 316267 - 316254 - g 72 -3.1 -5.0133 | GAGTTGGCTAAAAAA CCTAT TGGG ACAGG GCCTTTCAAATTCTT HP0298 315585 - 317234 + | dipeptide ABC transporter, periplasmic dipeptide-binding protein (dppA) HP0299 317245 - 318249 + | dipeptide ABC transporter, permease protein (dppB) HP0300 318249 - 319106 + | dipeptide ABC transporter, permease protein (dppC) HP0301 319118 - 319981 + | dipeptide ABC transporter, ATP-binding protein (dppD) HP0302 319978 - 320784 + | dipeptide ABC transporter, ATP-binding protein (dppF) obgE 320804 - 321886 + | GTPase ObgE HP0304 321928 - 322917 + | hypothetical protein TERM 287 323351 - 323339 - g 74 -4.8 -4.6644 | AAGATAGTTTAAAAA CCCT TTTAG AGGG AGCGAGCGCGAGCAT HP0305 323161 - 323715 + | hypothetical protein TERM 288 324771 - 324795 + G 83 -5 -5.27335 | CATCGCTTTAGAGAC GCTTAACATG GGGAG CATGTTTGGC TTTTTCTTTAACGAA HP0306 323725 - 325017 + | glutamate-1-semialdehyde aminotransferase HP0307 325014 - 325286 + | hypothetical protein HP0308 325302 - 325706 + | hypothetical protein HP0309 325790 - 326668 + | hypothetical protein TERM 289 327500 - 327487 - g 70 -8.1 -3.78778 | opp_overlap 327486 TGAGCATATCAACAA GCACG AGGG CGTGC GTTGGGTAACATTCA HP0310 326681 - 327562 + | hypothetical protein TERM 290 327573 - 327560 - f 83 -4.5 -5.63504 | opp_overlap 327569, overlap 327569 AACCCTAGAAAAAAA TAGCG ATAA CGCCA AAAGATTTTTGGCGT TERM 291 327569 - 327587 + F 100 -11.8 -3.90856 | opp_overlap 327560 327569 AAAAAATAGCGATAA CGCCAAAA GAT TTTTGGCG TTTGATTAAAAGGTT TERM 292 327587 - 327569 - f 91 -11.8 -3.49898 | opp_overlap 327569, overlap 327560 AAAAAATAGCGATAA CGCCAAAA GAT TTTTGGCG TTTGATTAAAAGGTT TERM 293 327751 - 327741 - g 76 -6.8 -4.34267 | CCAGAGAACGCAAAA GAGC GCG GCTC AAACGAGTAAGATTA HP0311 327608 - 327976 + | hypothetical protein TERM 294 328888 - 328907 + G 80 -8 -4.38712 | opp_overlap 328881 328888 328887, overlap 328881 GAAAAAATCTTAAAT TCCTTAAA GGGT TTTAAGGA TTTTCTCGGCATCAA HP0312 327976 - 328941 + | ATP-binding protein HP0313 330092 - 328947 - | nitrite extrusion protein (narK) TERM 295 329356 - 329341 - G 76 -9 -3.72576 | GGGCCGCTGATTAAA GAGCCA AGCG TGGCTC CAAAGCCAAAAAATG TERM 296 330454 - 330466 + G 100 -4.1 -6.07627 | GGTTTAGGGCTAACA TGCGA TTG TTGCA TTTTTTTTTAAGCGT HP0314 330453 - 330572 + | hypothetical protein HP0315 330872 - 330588 - | virulence associated protein D (vapD) HP0316 331245 - 330853 - | hypothetical protein TERM 297 331436 - 331452 + r 79 -8.7 -3.88832 | ATTTTTAAAATTATC GCTTGCT TTT GGCAAGC TCTTTTATCATTGGT TERM 298 331504 - 331486 - R 70 -3.8 -5.04265 | overlap 331490 AAAAAATACTAAAAA GGATTTTG CAT CAAACCCC CCCCCAAAAATAAAA TERM 299 331639 - 331623 - R 70 -4.4 -4.86385 | opp_overlap 331623 AGCTTTAAAAAGAAA CCCCTT AAAAA AAGAGG GTTTAAAAAAAAGGG TERM 300 331701 - 331678 - R 72 -2.4 -5.47821 | opp_overlap 331681 331682, overlap 331664 331682 AGGGATTCAAAAAAA GAAATCCCTT AAAA AAGGGAGTTT AAAAACGAAAGGGTT TERM 301 331697 - 331682 - R 91 -7.6 -5.21683 | opp_overlap 331682 331681, overlap 331664 331678 ATTCAAAAAAAGAAA TCCCTT AAAA AAGGGA GTTTAAAAACGAAAG TERM 302 331815 - 331779 - R 79 -2.4 -5.82388 | opp_overlap 331782 331783, overlap 331783 AAAGCTTAAAAAAAA GAAATCTCTTTAAAAA GAGAA TTTAAAAAGAGAGTTC AAAAAAAAACCCCTT TERM 303 331798 - 331783 - R 88 -6.2 -5.33985 | opp_overlap 331782 331783, overlap 331779 CTTAAAAAAAAGAAA TCTCTT TAAA AAGAGA ATTTAAAAAGAGAGT TERM 304 331839 - 331825 - R 100 -6.4 -6.09133 | opp_overlap 331825 331825, overlap 331826 GAGTTCAAAAAAAAA CCCCTT AAA AAGGGA GTTTCACAAAAAGCT TERM 305 331838 - 331826 - R 80 -7.7 -4.23853 | opp_overlap 331825 331825, overlap 331825 AGTTCAAAAAAAAAC CCCTT AAA AAGGG AGTTTCACAAAAAGC TERM 306 331862 - 331852 - R 74 -5.4 -4.84359 | GGAGTTTCACAAAAA GCTT AGT AAGC GAACACATAGTTCAA HP0317 334091 - 331854 - | outer membrane protein (omp9) TERM 307 334363 - 334376 + r 78 -9.5 -3.32562 | opp_overlap 334354, overlap 334354 334353 AAAAATCGCTTTTTT GGGGC GTTT GCCCC TTATGAGCGGTTTAT HP0318 335143 - 334388 - | hypothetical protein TERM 308 334699 - 334715 + g 74 -6.5 -4.40561 | opp_overlap 334699, overlap 334697 CTTCTAAAAACATCA CTTCCAC ATT GTGGGGG TTGTTTTTAAGACCG TERM 309 335148 - 335176 + r 71 -8.3 -3.21276 | opp_overlap 335146 335143 335148, overlap 335146 CGATTAAGCATAATA TTCTCCTTAGTTT CAA AAAATAAGGGGAA TGTTATAACAAAAAA argS 336829 - 335204 - | arginyl-tRNA synthetase TERM 310 335370 - 335385 + g 72 -3.2 -5.00884 | overlap 335372 TCTGATGCGAGGGTT TTTGCG TATT CGCACA TTTTTTGCAAGCCGT TERM 311 335487 - 335503 + g 71 -7.3 -3.90744 | opp_overlap 335487 335500 TTTAAATTGGTTAAA GGGGTTT GCA AAACCTC TTCTTTAGAAAAGGG HP0320 337071 - 336832 - | hypothetical protein gmk 337763 - 337143 - | guanylate kinase TERM 312 337414 - 337428 + g 71 -5 -4.61231 | ATAAACACAGAGCAT GCGTTA GGG TAATGC TTTTTAAGGATCTCA HP0322 339273 - 337756 - | poly E-rich protein TERM 313 338902 - 338935 + g 100 -10.3 -5.40474 | TGGGTCTAAATTCTG GCTAGGTTCTAGCTC GCTT GCGTTAGAACCAAGC TTTTTTTGAAGGACT HP0323 339415 - 339957 + | membrane bound endonuclease (nuc) HP0324 340729 - 339965 - | outer membrane protein (omp10) TERM 314 340620 - 340636 + g 79 -8.7 -4.011 | opp_overlap 340623 AAATTTTTTGTCCAA GAAGGCG CTG CGCTTTC TTCTTTAGCTATTAA flgH 340832 - 341545 + | flagellar basal body L-ring protein TERM 315 341609 - 341630 + G 72 -3.1 -5.08824 | opp_overlap 341609 341624 GTTCCAGTAAAAGGA TCAAGAATA AAAA TATTATTGA TTTTTTCAATAAACC TERM 316 341876 - 341887 + G 73 -7.2 -4.07568 | overlap 341886 CGTGTTGTTTGTATG GCGC TTCA GCGC TTTTACAAGAAAAGC TERM 317 341915 - 341901 - g 74 -5 -4.77165 | opp_overlap 341886 341901, overlap 341896 GCTTTTACAAGAAAA GCATTT AAA AAACGC TTTTGAAACTTTAAA HP0326 341563 - 343116 + | CMP-N-acetylneuraminic acid synthetase (neuA) TERM 318 343386 - 343402 + GT 79 -5.1 -5.02074 | opp_overlap 343400 AAGCATGGGTATTTG GGGATTT ATA AAAACCC TTTTTTGAAAAATGG TERM 319 343418 - 343400 - gT 82 -6 -4.87665 | opp_overlap 343386 GGGGATTTATAAAAA CCCTTTTT TGA AAAATGGG GGAGAAACGATTTTA lpxK 344526 - 343588 - | tetraacyldisaccharide 4'-kinase HP0327 343113 - 343655 + | flagellar protein FlaG HP0329 345305 - 344523 - | NH(3)-dependent NAD+ synthetase (nadE) TERM 320 345867 - 345879 + G 70 -9.1 -3.09831 | opp_overlap 345857 345856 345865, overlap 345864 AAGAGGGGCAAATTG TGGGC TTT GCCCA TGGTTTTAGCGTGCA TERM 321 346400 - 346389 - g 70 -3 -5.10497 | AACGCATGCAAAAAA TCTT AAAA AAGA TTCAAAACGGCTCAT HP0330 345554 - 346546 + | ketol-acid reductoisomerase TERM 322 346554 - 346544 - f 72 -2.6 -5.37345 | overlap 346551 TTCAATCATAAAAAA TAAA TCA TTTA AAATAAAAGGAATCA TERM 323 346810 - 346821 + G 70 -3 -5.03145 | opp_overlap 346810 CACGGATAAAAAGAC GAAA AACC TTTC TTTTTTAGCGGCTTC HP0331 346571 - 347377 + | cell division inhibitor TERM 324 347418 - 347404 - g 70 -3.4 -4.85782 | overlap 347408 TTTTTTAAAAACAAA GGGAGC GCG GCCACC GCAACAGACCGATTG minE 347374 - 347607 + | cell division topological specificity factor MinE TERM 325 348110 - 348094 - g 84 -7.9 -4.67011 | AAGCGGATTTAAAAA GCGGCTC TAT GAGCAGC GCGAGATTAGCCCAG HP0333 347607 - 348419 + | DNA processing chain A (dprA) TERM 326 348737 - 348727 - g 72 -3.2 -5.06414 | TTTGGGTAAGAAAAA CAAG CGG CTCG CTATCAAAGACGGTC HP0334 348416 - 348820 + | Holliday junction resolvase-like protein TERM 327 349277 - 349263 - g 76 -2.1 -5.47399 | GGAACGGTAAAAAAA GACTT GAAGA AAGCC ATTCAATACTATGTT HP0335 349106 - 349294 + | hypothetical protein HP0336 349236 - 349652 + | hypothetical protein HP0337 349779 - 350084 + | hypothetical protein HP0338 350068 - 350634 + | hypothetical protein TERM 328 350652 - 350638 - f 74 -5.6 -4.87893 | opp_overlap 350638 350640, overlap 350640 AAGGGGAATTAAAAA GGGCGT GGA ACGCTC TGTCTTAGCAAATTG HP0339 350692 - 351042 + | hypothetical protein TERM 329 351242 - 351232 - g 77 -8.2 -4.26076 | CTATTTTGATGAAAA CCCC TAA GGGG CGAGAGATTTTGAAA HP0340 351030 - 351296 + | hypothetical protein HP0341 351308 - 351403 + | hypothetical protein HP0342 351596 - 351988 + | hypothetical protein HP0343 351988 - 352410 + | hypothetical protein HP0344 352310 - 352774 + | hypothetical protein HP0345 352764 - 353099 + | hypothetical protein HP0346 353219 - 354001 + | hypothetical protein HP0347 354891 - 353995 - | hypothetical protein HP0348 356441 - 354891 - | single-stranded-DNA-specific exonuclease (recJ) TERM 330 355713 - 355727 + g 74 -6.4 -4.386 | AAAAGAAATATCACT CGCTTT TAA AGAGCG TTTTCTAAAAACTTC TERM 331 355948 - 355938 - G 72 -3.2 -5.03227 | ATAGCACAAATAAAA CGCT ACC AACG CCCCGCACACTTCCT TERM 332 356146 - 356156 + g 70 -2.6 -5.03314 | overlap 356145 AAAGGGGCGTGGTGT TTTT CTA AAAA TTTTTTAGAAATCCC HP0349 358066 - 356450 - | CTP synthetase TERM 333 356778 - 356791 + g 70 -3.1 -4.86773 | overlap 356756 356786 CCTAAAGGCGAATTA TAGGT GCGC ACCTG TTTTTGGTGGTTTTG HP0350 358326 - 358994 + | hypothetical protein TERM 334 359957 - 359947 - g 100 -5.4 -6.17268 | TTAGAAGAAAAAAAA GAAG GCG CTTC TAAAAAACAAGTCGG fliF 359038 - 360741 + | flagellar MS-ring protein fliG 360759 - 361790 + | flagellar motor switch protein G TERM 335 362397 - 362411 + G 70 -8.6 -3.3334 | opp_overlap 362397 362394 CCCTTATTTAAACGA GCGTTT GCA AAACGC TTCTAAAATCAAATT fliH 361777 - 362553 + | flagellar assembly protein H TERM 336 363230 - 363242 + G 72 -3.3 -5.03145 | ATCTTTCAAGCTCAT CACCC CGG GCGTG TTTTTTGAAGAATTA HP0354 362550 - 364406 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 337 364452 - 364415 - g 70 -2.9 -5.16132 | gap 1 GAGATGAAAACAAAA GCGCCAATGAAAAATATC CGC AAT-TTTTCCATTATCGC TCACATTGACCATGG HP0355 364403 - 366211 + | GTP-binding protein LepA TERM 338 366265 - 366243 - g 79 -8.6 -4.09656 | opp_overlap 366261, overlap 366235 GGCAAAACATAAGAA CTATGAAATT TTA AATCTCATAG GCTATGCTTTGGCAA HP0356 366226 - 366984 + | hypothetical protein HP0357 367885 - 367133 - | short chain alcohol dehydrogenase TERM 339 367425 - 367415 - G 71 -4 -4.96468 | overlap 367410 367417 CAAATTTAAAGAAAA TTGT TTC ACAA ACGCCTTGCTCGCTC HP0358 369438 - 367903 - | hypothetical protein TERM 340 368090 - 368106 + g 73 -6.7 -4.24002 | overlap 368094 ATGTTGCCTTGAAGT TTCATTT TAA AAATGAA TTTTAAAATTTCCGC HP0359 369878 - 369943 + | hypothetical protein TERM 341 370306 - 370316 + G 71 -6.8 -3.96841 | overlap 370301 GTTAGAGCATTATTA CCCT AAT AGGG TTGTGTTTATTCAAG HP0360 370160 - 371194 + | UDP-glucose 4-epimerase truA 371916 - 371188 - | tRNA pseudouridine synthase A TERM 342 371603 - 371632 + g 90 -3.5 -5.88565 | opp_overlap 371599 AGGTAACGATACGCT CTTTTTTGAGCGT CAAA ACGCGCATGGAAG TTTTTTTCTTCTAGC HP0362 372954 - 371917 - | hypothetical protein TERM 343 372653 - 372624 - G 75 -5.8 -4.82518 | gap 1, overlap 372626 AAAACACTAATAAAA TCGCGCTCACTAA CAAAC TTAGCG-GCGCAA ACACTTTAGTCATTT pcm 373594 - 372965 - | protein-L-isoaspartate O-methyltransferase nrdF 374629 - 373604 - | ribonucleotide-diphosphate reductase subunit beta HP0365 374835 - 374927 + | hypothetical protein HP0366 376077 - 374950 - | spore coat polysaccharide biosynthesis protein C TERM 344 374995 - 374985 - G 73 -6.8 -4.14013 | opp_overlap 374985 374984 CAAAAGTTTTTAAAA CGCT ATG AGCG ATGTTTTGAACGCTC HP0367 376682 - 376074 - | hypothetical protein HP0368 377176 - 376775 - | hypothetical protein TERM 345 377166 - 377178 + g 71 -4.8 -4.59511 | ATCACTCCATCTATA GCGT TAAGC ACGC TTTTTAAAAACTCTT HP0369 378032 - 377322 - | hypothetical protein HP0370 379634 - 378258 - | biotin carboxylase TERM 346 378533 - 378554 + g 74 -3.7 -5.09173 | CGATCCATTCGGTAA TTTTGCCCG GGCT TGGGTAGAA TTTTTTAGGATCTTC TERM 347 378618 - 378629 + g 72 -4.4 -4.66833 | GAGAGAAAAGCTTTC TTGC TTGG GCAA TTTTTCGCCTTGAGC HP0371 380110 - 379640 - | biotin carboxyl carrier protein (fabE) dcd 380234 - 380806 + | deoxycytidine triphosphate deaminase HP0373 380965 - 383067 + | hypothetical protein HP0374 383771 - 383091 - | hypothetical protein HP0375 384203 - 383772 - | hypothetical protein TERM 348 383967 - 383956 - G 76 -2.2 -5.46706 | ACGCTAAAAGAAAAA GCAA ATTG CTGC ATCGCCCAAATAAAA TERM 349 384503 - 384515 + G 74 -9.1 -3.56643 | opp_overlap 384502 384499 384503 TCTATGAAAAATTAG GGGGA AAA TCCCC TTTAACGCCTATCAC hemH 384259 - 385263 + | ferrochelatase TERM 350 385479 - 385447 - g 74 -6.4 -4.36931 | CAAGTTAGACGAAAA TCTTTTAAGCTCTG GCTCT CAAAGCTCCAAAGA ATTAAACGATGAGCG HP0377 385340 - 386005 + | thiol:disulfide interchange protein (dsbC), putative TERM 351 386830 - 386840 + G 70 -5.4 -4.3208 | ACCTTATAGGATTTT CATG AAC CATG TTTTAGATTATGAAG TERM 352 387202 - 387181 - g 87 -6 -5.26119 | opp_overlap 387180 CGCCCAAAAAGAAAA CTCTAAAA GCGCGA TTTTAGAG CGTTTGAAGCGTTTA TERM 353 387257 - 387245 - g 77 -7.7 -4.24326 | AAAGACCACTTAAAA GCCTT TCA AAGGC TTCAAGTCCAGGATT TERM 354 388310 - 388321 + G 72 -4.4 -4.69622 | GTCTCTGTCATTACC GCTA GTTA TAGC TTTTTGGGCTTGTGT HP0378 386015 - 388825 + | cytochrome c biogenesis protein (ycf5) TERM 355 388931 - 388920 - g 73 -5.8 -4.56597 | opp_overlap 388919 CCCCCCCCCTAAAAA TCGC TGTG GCGA ATTGGTGGGGAGATG TERM 356 389815 - 389849 + G 73 -7.4 -4.07885 | opp_overlap 389847, overlap 389816 CTTTTACCAAGATTT GAGTTTTAAAAAAATC CTA GATTTTTTTAAAACGA TTTTAGAAAACGATA TERM 357 389816 - 389848 + G 78 -10.9 -3.04517 | opp_overlap 389847, overlap 389815 TTTTACCAAGATTTG AGTTTTAAAAAAATC CTA GATTTTTTTAAAACG ATTTTAGAAAACGAT HP0379 388835 - 390112 + | fucosyltransferase HP0380 391471 - 390125 - | glutamate dehydrogenase TERM 358 390546 - 390563 + g 75 -5.5 -4.67608 | overlap 390550 ACATGCCACACCGCA TTCCCCC CTTT GGGGTAA TTTTCTGTTGGGGTG TERM 359 391132 - 391089 - G 71 -6.7 -4.11216 | opp_overlap 391089 CCTTTAGGGTCAAAA TCGCTCCCCCCCTTAGC GCCCCCCATA GCCAAAGTGGTGAGCGA ATTTTTCAACACTTG HP0381 392367 - 391537 - | protoporphyrinogen oxidase (hemK) TERM 360 391858 - 391882 + g 80 -10.1 -3.63744 | opp_overlap 391857 391858 391881, overlap 391857 CATATGATCCCAAAG GCGTGTTTGTT TTA AAAAAACACGC TCTTTTAGACAAAAG TERM 361 391882 - 391858 - G 73 -10.1 -2.7752 | opp_overlap 391858 391857, overlap 391857 391881 CATATGATCCCAAAG GCGTGTTTGTT TTA AAAAAACACGC TCTTTTAGACAAAAG HP0382 393587 - 392364 - | zinc-metallo protease (YJR117W) HP0383 393770 - 394294 + | hypothetical protein HP0384 395089 - 394337 - | hypothetical protein HP0385 395289 - 395519 + | hypothetical protein HP0386 395532 - 395768 + | hypothetical protein TERM 362 396348 - 396338 - g 70 -2.6 -5.01676 | AATCAAAAAAAACAA TTTT TAG AAAA GCTTTATTCGCAAGA TERM 363 396618 - 396604 - g 74 -9.2 -3.53811 | TTTAGTGCGCTTAAA GGGGCG CTA CACCCC CACGCAAAAAAACAT TERM 364 397064 - 397050 - g 70 -2.8 -5.055 | TCAACGCTCAAAAAA CGAATA TCT TAATCG GCACTCAAATGATAA TERM 365 397396 - 397382 - g 87 -6.4 -5.30199 | AAAAACGAAGAAAAA GCCCAA CAA TTGAGC CTAAAAGCCTCTCAA HP0387 395753 - 397612 + | primosome assembly protein PriA HP0388 398377 - 397646 - | hypothetical protein TERM 366 398052 - 398065 + g 70 -2.5 -5.11112 | TCAAAACGGGCATTG TTAAA ATCT TTTAA TTTTTCTTGCGCTTT TERM 367 398172 - 398159 - G 76 -3.1 -5.25803 | AAGCGCGATAAAAAA GTTCC CGGT AGAAC AGCCCAAATCATAAA TERM 368 398416 - 398389 - R 93 -10 -4.22554 | opp_overlap 398391 398393 TCATTCAACAAAGAA GCGTGGTTTAAA AACC TTTAAACCACTC TATGCAAAATAACGC TERM 369 398391 - 398414 + r 83 -11.2 -2.87931 | opp_overlap 398389, overlap 398393 ATTCAACAAAGAAGC GTGGTTTAAA AACC TTTAAACCAC TCTATGCAAAATAAC HP0389 399073 - 398432 - | iron-dependent superoxide dismutase TERM 370 398663 - 398676 + g 74 -3.9 -5.14477 | TTGAGCGTTGCTCGT TTGAA TGAT TTCAA TTTTTTGAGTGTCTA HP0390 399297 - 399797 + | adhesin-thiol peroxidase (tagD) HP0391 400549 - 400052 - | purine-binding chemotaxis protein (cheW) HP0392 402957 - 400546 - | histidine kinase (cheA) HP0393 403949 - 403014 - | chemotaxis protein (cheV) HP0394 404711 - 403953 - | hypothetical protein TERM 371 404756 - 404732 - R 86 -5.7 -5.4505 | overlap 404751 TCTTTGAACAAAAAA GAGCCAATCCT TAA AAGATTCGCCC CGCAAGCAATCGCTA HP0395 405381 - 404713 - | hypothetical protein TERM 372 405259 - 405274 + g 70 -3.2 -5.00616 | overlap 405260 ATAATAATGTTGGAT AGCTTC TGGG GAAGCG TTTTTTGAAACAGCC HP0396 407254 - 405404 - | hypothetical protein TERM 373 407135 - 407125 - G 82 -8.2 -4.63218 | GTTGCGTGAATAAAA GGGC TTT GCCC CCATTAGGTTTTTTC HP0397 408838 - 407264 - | D-3-phosphoglycerate dehydrogenase HP0398 409402 - 408854 - | hypothetical protein rpsA 411101 - 409431 - | 30S ribosomal protein S1 TERM 374 411139 - 411151 + r 74 -4.1 -5.15969 | ATATAAAATCCTTAA GGGTA TTG TATCC TTTTTTGGCTTACAA ispH 412046 - 411222 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 375 411887 - 411906 + g 87 -5.1 -5.40072 | TTTTTTTAGGATCTT CTTCAAT TTTTAC ATTGAAG TTTTTTTCCAAACGA HP0401 413325 - 412036 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 376 412829 - 412847 + g 71 -6 -4.2803 | CCTTGAGCTTGTAAG GCGCTT AAAATAA AAGCGC TTTTGACTTGAGCTG TERM 377 413046 - 413034 - G 78 -2.6 -5.45802 | overlap 413028 CGCTTAAAACAAAAA GCCC TTTTT GAGC GCTTAAAAGCCCGCT pheT 415635 - 413341 - | phenylalanyl-tRNA synthetase subunit beta TERM 378 413533 - 413544 + g 72 -3.6 -5.14965 | ATTAGGGATTTGAGC GTCC TTTA GGGC TTTTTTAATCCCACT TERM 379 415449 - 415465 + g 88 -8.7 -4.83169 | opp_overlap 415449 CATCCACTTGACACA CGCTGAG TTT TTCAGCG TTTTTATGGGGGGCT pheS 416621 - 415635 - | phenylalanyl-tRNA synthetase subunit alpha TERM 380 415677 - 415661 - G 71 -9.5 -2.76315 | overlap 415660 415663 415675 415676 CCAACACTCTCAAAT CAGTTTC AAA GAAACTG CGCAAATCATTGATC HP0404 416702 - 417016 + | protein kinase C inhibitor (SP:P16436) TERM 381 417441 - 417409 - g 76 -3.5 -5.30199 | opp_overlap 417415 AAAAACGAAGAAAAA TTTAGAGCCGTATTT GAA AGATATGGCTTTAAA GCGTGTGATTGTAGG HP0405 417035 - 418357 + | nifS-like protein HP0406 418383 - 418973 + | hypothetical protein TERM 382 419473 - 419463 - g 71 -4 -4.88405 | AATCCCTAAAGAAAA CATT TAT AATG CCAGTTATGGTGGCT TERM 383 421274 - 421258 - g 84 -7.9 -4.68593 | TTGAGTATCCAAAAA GGGGCGT GGT ACGACCC AGAAGATGAGAGGGT HP0407 419077 - 421467 + | biotin sulfoxide reductase (bisC) TERM 384 421964 - 421944 - g 71 -4 -4.94058 | CCAATCTAAAGAAAA TAAAACGC TCTAT GCGTTTTC GCTGATTGATTCTCA HP0408 421633 - 422121 + | hypothetical protein TERM 385 422647 - 422672 + G 82 -7.7 -4.55128 | TCAAAGCGAAGAAGG GGGTAAGATTT TAGA AAATTTTGCCC TTTTAGTTTGCGGCT TERM 386 423575 - 423565 - g 70 -5.4 -4.36914 | opp_overlap 423552 TTCTTTTTTAGAAAA GGTT TCT AACC GTATCACTAATGAAG guaA 422132 - 423658 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 387 424317 - 424332 + G 74 -6.2 -4.42653 | GCACCAATTCTGGAG GTTTTG TCCC CAAAAC TTTTGTGCATAGGAT HP0410 423743 - 424492 + | putative neuraminyllactose-binding hemagglutinin homolog (hpaA) HP0411 424588 - 424905 + | hypothetical protein HP0412 425155 - 425253 + | hypothetical protein TERM 388 425481 - 425462 - T 79 -10 -2.91695 | opp_overlap 425461 425462, overlap 425474 CCTACTGTGAAACCA CCCCTTGC TAAA GCAAGGAG CTTCCTAACTAAAGC HP0413 426838 - 426032 - | transposase-like protein, PS3IS HP0414 426876 - 427292 + | IS200 insertion sequence from SARA17 TERM 389 427388 - 427407 + F 90 -9.2 -4.60487 | opp_overlap 427379 GCTAAACGCTTACAT CTCCGCCC TAAA GGACGGAG TTTTTCGCGCTAGTG TERM 390 427556 - 427581 + F 70 -6.3 -4.19953 | opp_overlap 427573 AATTGAGCTAAAGCC CGCTTTTTA GGGATAAA TAAAAAGCG TTTTCAAATTGCATG TERM 391 428133 - 428155 + G 86 -9.2 -4.35524 | opp_overlap 428138, overlap 428134 CGAACAAAAAGATGT AGAAAGCATC AGC GATGCTTTCC TTTTGCGTTTAGGGC TERM 392 428134 - 428154 + G 85 -12.7 -3.20832 | opp_overlap 428138, overlap 428133 GAACAAAAAGATGTA GAAAGCATC AGC GATGCTTTC CTTTTGCGTTTAGGG TERM 393 428150 - 428138 - g 75 -7.7 -4.02468 | opp_overlap 428134 428133 AAAAAGATGTAGAAA GCATC AGC GATGC TTTCCTTTTGCGTTT TERM 394 428468 - 428478 + G 71 -6.8 -3.97709 | GGAAGTTGATCACTT GGCT TTT AGCC TTATTGTTAGATCGT HP0415 427687 - 429558 + | hypothetical protein HP0416 430730 - 429561 - | cyclopropane fatty acid synthase (cfa) TERM 395 430005 - 429987 - G 70 -3.1 -4.86731 | TTTTTTGAAATAAAA GGGCAAA TTATC CTTACCC ACATGCTCAAACATG TERM 396 431673 - 431653 - g 90 -8.3 -4.84914 | overlap 431648 431655 ATTTAGACAATAAAA TGGCGCATT TTG AATGCGCTA GGCATATTGTGGGTA TERM 397 431671 - 431655 - g 76 -10.9 -2.69195 | overlap 431648 431653 TTAGACAATAAAATG GCGCATT TTG AATGCGC TAGGCATATTGTGGG TERM 398 432241 - 432272 + G 84 -6.7 -4.84527 | overlap 432238 TAGAAGCCTTATTGA GTTTGATCGCAAA CGCGCT TTTGCAATCAAGC TTTTTGCTCTATGCG metG 430899 - 432851 + | methionyl-tRNA synthetase TERM 399 433282 - 433294 + G 84 -7.7 -4.77173 | opp_overlap 433282 433281 CCTTTTTTGATAAAT TGGAG TGG CTCCA TTTGTTTTATAAGCA HP0418 432852 - 433859 + | hypothetical protein TERM 400 434290 - 434278 - g 70 -2.6 -5.02502 | opp_overlap 434288 TATACCACAGAAAAA GCCC GCTAG AGGC TTTAAAAGCCTTGTA TERM 401 434598 - 434569 - g 80 -7.9 -4.37092 | opp_overlap 434591, overlap 434574 434584 ATTTTTTGGATAAAA CAGATCCCTCTAA AACT TTAGAGGGGTATG ACGCCCCTTTAAGGG TERM 402 434593 - 434574 - g 76 -10.8 -2.68387 | opp_overlap 434591, overlap 434569 434584 TTGGATAAAACAGAT CCCTCTAA AACT TTAGAGGG GTATGACGCCCCTTT HP0419 433863 - 434648 + | hypothetical protein HP0420 434665 - 435093 + | hypothetical protein TERM 403 435869 - 435842 - g 71 -5 -4.55485 | gap 1 GAGAAAAAAATCAAA CTTTTA-GCCCAA AAA CTAGGCGTAAAAG CGGAGTTTGGGTTTG HP0421 435098 - 436267 + | type 1 capsular polysaccharide biosynthesis protein J (capJ) TERM 404 436932 - 436942 + G 75 -8.2 -4.07568 | CACTGAAGTTTTAGA GGCG ATG CGCC TTTTAGAAGAAAACG HP0422 436282 - 438129 + | arginine decarboxylase TERM 405 438223 - 438211 - T 75 -2.6 -5.62219 | opp_overlap 438216 438217, overlap 438212 438214 438216 AAGAGATTAAAAAAA GGAG AGCCA CCCC ACTAGGAGTGGGGGG TERM 406 438216 - 438240 + T 93 -9.9 -4.35604 | opp_overlap 438211 438214 438212 438216, overlap 438217 ATTAAAAAAAGGAGA GCCACCCCACT AGG AGTGGGGGGGG TTTATTCTACATTAC TERM 407 438240 - 438216 - T 82 -9.9 -3.3215 | opp_overlap 438216 438217, overlap 438211 438214 438212 ATTAAAAAAAGGAGA GCCACCCCACT AGG AGTGGGGGGGG TTTATTCTACATTAC TERM 408 438217 - 438239 + T 100 -13.4 -3.20639 | opp_overlap 438211 438216 438214 438212, overlap 438216 TTAAAAAAAGGAGAG CCACCCCACT AGG AGTGGGGGGG GTTTATTCTACATTA HP0423 439168 - 438242 - | hypothetical protein HP0424 441143 - 439284 - | hypothetical protein TERM 409 439375 - 439389 + g 70 -2.8 -5.06103 | overlap 439385 AATATTTCTTCAATT TGCG ATAATTG CGCA TTTTTTAGCGCTTCT TERM 410 440658 - 440614 - G 87 -5.1 -5.4505 | opp_overlap 440620 440630, overlap 440619 440620 TTCCCCAATAAAAAA CAAAACCTCCTATAAAGGTAA TTA TTGCCTTTAAAGAAGTCCTTG ATTAAAATGGGTTTA TERM 411 440653 - 440619 - G 83 -3.6 -5.55001 | opp_overlap 440620 440630, overlap 440614 440620 CAATAAAAAACAAAA CCTCCTATAAAGGTAA TTA TTGCCTTTAAAGAAGT CCTTGATTAAAATGG TERM 412 440652 - 440620 - G 71 -7.1 -3.8934 | opp_overlap 440620 440630, overlap 440619 440614 AATAAAAAACAAAAC CTCCTATAAAGGTAA TTA TTGCCTTTAAAGAAG TCCTTGATTAAAATG TERM 413 441008 - 441019 + g 76 -4.4 -5.07652 | CAATGATCTCCTTAA CGAA TCGC TTCG TTTTATTTTGAGCCA HP0425 442438 - 441185 - | hypothetical protein TERM 414 441768 - 441758 - G 73 -5.4 -4.58395 | TTTATCTTTGAAAAA GCAT TTA ATGC GCTCATGTTTAGCTT HP0426 444215 - 442479 - | hypothetical protein TERM 415 443144 - 443132 - G 74 -6.3 -4.45723 | AATAAGACACCAAAA GCTTT TTC AAAGC GTCAAAATCAGGGTA HP0427 444600 - 444265 - | hypothetical protein TERM 416 444765 - 444790 + H 82 -7.8 -4.4448 | opp_overlap 444769 444785, overlap 444758 444769 444781 444785 TATCTTAATTTATCT TAAAGCTTTA TTTATT TAAAGCTTTA TTTATTTAAAGCTTT TERM 417 444781 - 444806 + H 82 -7.8 -4.4448 | opp_overlap 444769 444785 444801, overlap 444769 444765 444785 444797 444801 AAAGCTTTATTTATT TAAAGCTTTA TTTATT TAAAGCTTTA TTTATTTAAAGCTTT TERM 418 444797 - 444822 + H 82 -7.8 -4.4448 | opp_overlap 444785 444801 444817, overlap 444785 444781 444801 444813 444817 AAAGCTTTATTTATT TAAAGCTTTA TTTATT TAAAGCTTTA TTTATTTAAAGCTTT TERM 419 444813 - 444838 + H 82 -7.8 -4.4448 | opp_overlap 444801 444817 444833, overlap 444801 444797 444817 444829 444833 AAAGCTTTATTTATT TAAAGCTTTA TTTATT TAAAGCTTTA TTTATTTAAAGCTTT TERM 420 444829 - 444854 + H 89 -7.8 -5.00616 | opp_overlap 444817 444833, overlap 444817 444813 444833 AAAGCTTTATTTATT TAAAGCTTTA TTTATT TAAAGCTTTA TTTTTTAACCCCCCA TERM 421 444833 - 444850 + H 70 -4.2 -5.04249 | opp_overlap 444817 444833, overlap 444817 444813 444829 CTTTATTTATTTAAA GCTTTA TTTATT TAAAGC TTTATTTTTTAACCC TERM 422 445063 - 445049 - H 76 -7.2 -4.3208 | TTCTACAAGCTAAAA GCTTTA ATA TAAAGC CCACCAACTGGTAAA TERM 423 445685 - 445703 + H 73 -8.9 -2.80344 | overlap 445684 CCATAGAAAGTGATA GCCTTGT ATGCG ACAAGGC GTTCTTAGGTAGCAG TERM 424 445851 - 445839 - H 70 -6.2 -4.2354 | GAAAGGTGAAAAGAA CCGC AGTGA GCGG AGTGAAATAGAACCT TERM 425 448412 - 448460 + H 100 -14.9 -3.47349 | opp_overlap 448411 448413 448417, overlap 448413 448418 CAGCTCCCTATAAAG AGAAAGGGGAGTTAAGGGTAAAT GCG ATTTATCTTTAGCTCCCTTTTCC TTGTGCCTTTAGAGA TERM 426 448413 - 448459 + H 100 -18.4 -2.68088 | opp_overlap 448411 448413 448417, overlap 448412 448418 AGCTCCCTATAAAGA GAAAGGGGAGTTAAGGGTAAAT GCG ATTTATCTTTAGCTCCCTTTTC CTTGTGCCTTTAGAG TERM 427 448459 - 448413 - H 80 -9.6 -3.52113 | opp_overlap 448413 448412 448418, overlap 448411 448417 AGCTCCCTATAAAGA GAAAGGGGAGTTAAGGGTAAAT GCG ATTTATCTTTAGCTCCCTTTTC CTTGTGCCTTTAGAG TERM 428 448418 - 448454 + H 100 -14.7 -4.50661 | opp_overlap 448417 448413 448411, overlap 448413 448412 CCTATAAAGAGAAAG GGGAGTTAAGGGTAAAT GCG ATTTATCTTTAGCTCCC TTTTCCTTGTGCCTT HP0428 449150 - 449707 + | phage/colicin/tellurite resistance cluster terY protein HP0429 449832 - 449870 + | hypothetical protein HP0430 449956 - 450123 + | hypothetical protein HP0431 450127 - 450813 + | protein phosphatase 2C homolog (ptc1) HP0432 450804 - 451694 + | protein kinase C-like protein HP0433 451722 - 452165 + | hypothetical protein HP0434 452159 - 453328 + | hypothetical protein TERM 429 453702 - 453689 - g 70 -8.1 -3.7282 | TGATGCGACTAACAA TGCGC GTGA GCGCA TCAAAGTAGGGGGAT HP0435 453399 - 453974 + | hypothetical protein HP0436 453958 - 454323 + | hypothetical protein HP0437 454758 - 454330 - | IS605 transposase (tnpA) TERM 430 454633 - 454657 + g 76 -2.3 -5.51046 | gap 1, opp_overlap 454633 AACAGACTTAATAAA GTTGTT-CAA ATCCCC TTGCAACAAC TTTTTTCTGTATTTA HP0438 454828 - 456111 + | IS605 transposase (tnpB) TERM 431 456120 - 456097 - T 88 -6.6 -5.20534 | opp_overlap 456098 456103 456109, overlap 456098 ATGAAGCAAGAAAAA GCCCAATCGC TTTA GCGGTTGGGT AATTCACAATCGCAA TERM 432 456098 - 456119 + T 89 -12.3 -2.72344 | opp_overlap 456097 456098, overlap 456103 456109 TGAAGCAAGAAAAAG CCCAATCGC TTTA GCGGTTGGG TAATTCACAATCGCA TERM 433 456119 - 456098 - T 86 -10.1 -3.70694 | opp_overlap 456098 456103 456109, overlap 456097 TGAAGCAAGAAAAAG CCCAATCGC TTTA GCGGTTGGG TAATTCACAATCGCA HP0439 457180 - 456080 - | hypothetical protein HP0440 459330 - 457297 - | DNA topoisomerase I (topA) HP0441 461756 - 459333 - | VirB4-like protein TERM 434 460401 - 460413 + g 100 -4.9 -5.93252 | opp_overlap 460391 460386, overlap 460391 GATGATGGTATGCCC TGATA CCA TATCA TTTTTTCTTTTTGCC TERM 435 460641 - 460623 - G 78 -3.8 -5.30575 | opp_overlap 460625, overlap 460625 460627 GAAAAAGCTAAAAAA CATAGGCA ACA TGCCAATA CTCTCTTGTGTGCTT TERM 436 461308 - 461320 + g 85 -2.7 -5.8187 | TGAATATTTTCTAAT TCATT GGT AGTGA TTTTTTTCTTAAATC HP0442 462015 - 461749 - | hypothetical protein TERM 437 461841 - 461827 - G 70 -2.9 -5.14965 | ATCTTCATCAAAAAA TTCTA AAATG TAGAA TATAAACACACAACT HP0443 462318 - 462016 - | hypothetical protein HP0444 463838 - 462315 - | hypothetical protein HP0445 464139 - 463954 - | hypothetical protein HP0446 464937 - 464158 - | hypothetical protein HP0447 465045 - 466127 + | hypothetical protein HP0448 466124 - 466510 + | hypothetical protein TERM 438 466552 - 466567 + F 77 -7.6 -4.12942 | GGTTCTCACTCTGTG TCCCTA ATCA TAGGGA TTTTACAGAGTTTGA HP0449 466757 - 468175 + | hypothetical protein HP0450 468172 - 468306 + | hypothetical protein HP0451 468417 - 468701 + | hypothetical protein TERM 439 469371 - 469345 - g 73 -5.9 -4.57837 | gap 1 ACACCGCTTTAAAAA GCACGTCTCTAT CGCC ATTGAG-CGTGC TAAGTGGGGTGAGTG HP0452 468777 - 470333 + | hypothetical protein TERM 440 470378 - 470355 - gf 74 -7.5 -3.82378 | ATGGATCTAGAAGAA CTCTATGCG CCTAAT CACATAGAG CGTTTGAAAGCGCGG TERM 441 470621 - 470605 - gf 74 -5.1 -4.80396 | overlap 470595 470606 GAAAACATTTAAAAA TGCCTTT AGA AAAGGCT AGGGAATTTGACGCT TERM 442 470620 - 470606 - gf 76 -8.6 -3.46611 | overlap 470605 AAAACATTTAAAAAT GCCTTT AGA AAAGGC TAGGGAATTTGACGC TERM 443 471578 - 471599 + GF 74 -6.7 -4.2181 | gap 1 AGACGCAAAATTCTA TCCTAAAAGC GTT GCTTT-AGGA TTTAGTTCTTTGTTT TERM 444 473146 - 473156 + GF 72 -3.2 -5.1523 | GTAGCGCATGCGAAT TGCT GTT AGCG TTTTTGTCTTATCGC HP0453 470340 - 473405 + | hypothetical protein HP0454 473368 - 474066 + | hypothetical protein HP0455 474313 - 474624 + | hypothetical protein TERM 445 474760 - 474740 - f 82 -6.3 -5.07486 | CATTGTGAAGAAAAA TCTCTTAAA GGC TTTAAAAGA CAAAGAATGTGTAGG HP0456 475056 - 475508 + | hypothetical protein HP0457 475826 - 476089 + | hypothetical protein HP0458 476101 - 476337 + | hypothetical protein TERM 446 477192 - 477217 + G 82 -11.9 -3.07401 | opp_overlap 477185 477196 GGGATTAAGGCTTAT GAGAGCGAAGA AATT TCTTCGCTCCC TATATCTACTCTTTT TERM 447 477213 - 477196 - g 71 -9.9 -2.79831 | opp_overlap 477192, overlap 477185 TTAAGGCTTATGAGA GCGAAGA AATT TCTTCGC TCCCTATATCTACTC HP0459 476337 - 478913 + | virB4 homolog (virB4) HP0460 479043 - 479531 + | hypothetical protein HP0461 479649 - 479557 - | hypothetical protein TERM 448 479665 - 479684 + r 79 -5 -5.1848 | opp_overlap 479665, overlap 479655 TTAACCCTAAAAGAT CGCTTAAA ATTT TTTTAGCG TTTTTTGGGTTGATT TERM 449 479874 - 479909 + r 74 -9 -3.16055 | opp_overlap 479875 479876, overlap 479876 479896 CGCCATTATACTAAA ATTTTGGCTCTAGCGC AAGA GCGCTAGGGTCAAATC TTACTAGCGGATTTG TERM 450 479908 - 479875 - R 85 -8.1 -4.371 | opp_overlap 479874 479876 479896, overlap 479876 GCCATTATACTAAAA TTTTGGCTCTAGCGC AAGA GCGCTAGGGTCAAAT CTTACTAGCGGATTT TERM 451 479907 - 479876 - R 88 -11.6 -3.21778 | opp_overlap 479874 479876 479896, overlap 479875 CCATTATACTAAAAT TTTGGCTCTAGCGC AAGA GCGCTAGGGTCAAA TCTTACTAGCGGATT TERM 452 479876 - 479907 + r 100 -16 -3.13899 | opp_overlap 479876 479875, overlap 479874 479896 CCATTATACTAAAAT TTTGGCTCTAGCGC AAGA GCGCTAGGGTCAAA TCTTACTAGCGGATT HP0462 481159 - 480062 - | type I restriction enzyme S protein (hsdS) TERM 453 481090 - 481116 + g 83 -7.2 -4.76644 | overlap 481092 AATTTTTGGGGTTAT TGGTAGGTGGGG TAG CGCCACCGACTA TTTTTCCTAAATCTT TERM 454 481092 - 481114 + g 73 -7.6 -3.99327 | overlap 481090 TTTTTGGGGTTATTG GTAGGTGGGG TAG CGCCACCGAC TATTTTTCCTAAATC HP0463 482782 - 481319 - | type I restriction enzyme M protein (hsdM) HP0464 485942 - 482775 - | type I restriction enzyme R protein (hsdR) TERM 455 483496 - 483511 + g 85 -2.6 -5.71983 | overlap 483497 TCAATATCAATTTTT TCTTTT AGTG AAAGGA TTTTTTTATCATTAG TERM 456 483547 - 483559 + g 70 -9.1 -3.1372 | overlap 483545 CGGATTAAATTGTAG CGCTC TTT GAGCG TGTTAATGGCGCGTG TERM 457 485296 - 485307 + g 78 -3 -5.40072 | overlap 485263 TTTTGATCGTTTTGA TGAT TTTG ATCA TTTTTTTGGGGGGGG HP0465 487885 - 485990 - | hypothetical protein TERM 458 486524 - 486512 - G 70 -3.3 -4.84527 | TTTAGAGAGCAAAAA GAGCG AGT CGCTA AAAGTTTCATAACCT HP0466 488677 - 487910 - | hypothetical protein HP0467 489034 - 488687 - | hypothetical protein TERM 459 488759 - 488776 + gr 70 -3.3 -4.99056 | TTTTTTGGCTTGATA GAGGCGC ATTT GCTCTTC TTTTTGCTTGTCTTG HP0468 490490 - 489003 - | hypothetical protein TERM 460 489241 - 489261 + gr 77 -9.1 -3.23274 | overlap 489245 CGTAAATGCGCGCAC TGGAGTAAG CCG CTTACTTCA TTGACTTCTAAAAGG TERM 461 489591 - 489578 - GR 70 -3.1 -5.00616 | gap 1, opp_overlap 489578, overlap 489581 489587 CTTCTTCGCAAAAAA TGAGCG AAA CGC-CA TTGGCTTTGGCTAGA HP0469 490990 - 490502 - | hypothetical protein HP0470 492711 - 490975 - | oligoendopeptidase F (pepF) TERM 462 491543 - 491565 + g 71 -4.9 -4.61482 | TCTGCGGTGGTTAAG GGCGTAT CCATGTTCA ATACGCC TTGTTTTTTAGACAA TERM 463 491748 - 491762 + g 85 -8.6 -4.42788 | CCCAGCCCTCTTTGA TCGCTT TAG AAGCGA TTTTGTGAAATTCAG TERM 464 492104 - 492117 + g 74 -5.3 -4.77925 | CGGGATTTTTCTAAC GCTTT ACTG AAAGC TTTTTGAGATTTTTT HP0471 494059 - 492809 - | glutathione-regulated potassium-efflux system protein (kefB) TERM 465 493740 - 493726 - G 85 -5.7 -5.23016 | AAACAAGGGAAAAAA TGGGT GAAAG ACCCA AAACAAAATACCCCA TERM 466 493776 - 493764 - G 79 -3.3 -5.46657 | TACCCCAATAAAAAA GCGAT TAA AGCGC ATAAAACCACTTGTA HP0472 494939 - 494379 - | outer membrane protein (omp11) TERM 467 494501 - 494481 - G 74 -8.9 -3.53224 | opp_overlap 494480 CACGCCCGCTTCAAA CGCGCTGCG ATC CCCAACGCG CATTCTTCCGCCTAA TERM 468 495072 - 495058 - H 72 -7.1 -3.8613 | GTTAAATACTAATAA GTGGG ATACA CCCAC AAAACAAACCGCCTC TERM 469 495710 - 495689 - g 72 -4.4 -4.72272 | opp_overlap 495689 TGTCGCTACTAAAAA CGCTCAAA TAGGCT TTGGAGCG TTATCCTTGATGGAT HP0473 495165 - 495905 + | molybdenum ABC transporter, periplasmic molybdate-binding protein (modA) TERM 470 495997 - 496008 + G 89 -5.8 -5.46629 | CCACCCTTATTTTAC TCCC TGTA GGGA TTTTTTTAGGCTATT TERM 471 496094 - 496109 + G 74 -4.6 -4.88288 | GCCTTTAGTTTTACC CCCAAG CGTG CTAGGG TTTTATCTTCTTTTA HP0474 495927 - 496601 + | molybdenum ABC transporter, permease protein (modB) TERM 472 496825 - 496815 - g 95 -2.6 -6.13 | ACACTCAAAAAAAAA TTTT TTT AAAA CCACAACAACGAAAA HP0475 496598 - 497395 + | molybdenum ABC transporter, ATP-binding protein (modD) gltX 498901 - 497510 - | glutamyl-tRNA synthetase HP0477 499019 - 500122 + | outer membrane protein (omp12) TERM 473 500835 - 500847 + GF 76 -3.3 -5.24531 | opp_overlap 500837, overlap 500842 CTCTCAAAGCCTAGA TAGCG CGT CGCTC TTTTTTATAGCGAGT TERM 474 501564 - 501583 + GF 71 -5 -4.57073 | opp_overlap 501563 501568 AAACAGCGATTTAAT GCAATTCA TTTT TGAATCGC TTTTTAAAACGCATA HP0478 500131 - 501768 + | adenine specific DNA methyltransferase (VSPIM) HP0479 501734 - 502582 + | hypothetical protein HP0480 502628 - 504427 + | GTP-binding protein, fusA-homolog (yihK) HP0481 504443 - 505078 + | adenine specific DNA methyltransferase (MFOKI) HP0482 505374 - 505886 + | hypothetical protein TERM 475 507539 - 507521 - g 82 -6 -4.85782 | opp_overlap 507518 GTGCTCAAAAAGAAA CCATCAAA TTT TTTGGTGG TGATAATTTTGAGAA HP0484 507136 - 507888 + | hypothetical protein HP0485 509066 - 508122 - | catalase-like protein HP0486 509352 - 510938 + | hypothetical protein TERM 476 511011 - 511042 + G 91 -2.4 -6.11019 | opp_overlap 511017 511018 511021, overlap 511013 511018 511021 TGGGAGTTAGGGTTT TGGAAATTAAGAAA TATT TTTCTTACTCTCTA TTTTTTTTGCTTTTT HP0487 510965 - 512407 + | hypothetical protein TERM 477 512413 - 512427 + F 70 -4.3 -4.87893 | GATTTACTAGCATTT TATCC TTAAT GGATA TTTTTGATTAGCCTT TERM 478 514208 - 514220 + G 72 -3.3 -5.06414 | opp_overlap 514192 GCATGCTAAACTTCA CGCCT AAA AGCCG TTTTTCTTACGAGAG TERM 479 514452 - 514432 - g 74 -4.7 -4.84274 | opp_overlap 514432, overlap 514433 GAATTAGACCAAAAA TTAGACGCT GAT AGCATCTAC TCATTAAAAAACATT HP0488 512806 - 515679 + | hypothetical protein HP0489 515693 - 516580 + | hypothetical protein HP0490 518136 - 517000 - | putative potassium channel protein, putative TERM 480 517825 - 517815 - G 70 -5.4 -4.42238 | CCACGCTAACTAAAA TAGC CAC GCTA AAGGCAATGATTCCT rpmB 518473 - 518285 - | 50S ribosomal protein L28 TERM 481 518387 - 518399 + g 83 -4.9 -5.29445 | TCGCAAGTTAGGGAG TAAAC GGC GTTTA TTTTTGTTGTTCGCA HP0492 519409 - 518573 - | hypothetical protein TERM 482 519688 - 519677 - g 75 -5.8 -4.66833 | opp_overlap 519676 GGCCAAGGCTAAAAA GGCT AACC AGCC CATTTCTAGCTTCGT TERM 483 520478 - 520461 - g 81 -5.5 -5.08011 | AAAACCCGTAAAAAA CGCCTTT TTTT AATGGCG CCTATCCATCATCAT mraY 519534 - 520595 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 484 521025 - 521043 + G 74 -4.4 -4.94058 | opp_overlap 521015 ACGATCGCCCTTGTG GGTGCTAG AAA CAAGCTCC TTTTCTTTGCATTAC TERM 485 521281 - 521308 + G 85 -2.7 -5.75342 | overlap 521304 AGTGAAGAGGTTTTA GAGCGTTTAAA AATCCC TTCTAACGCTC TTTTTTTTAAGGGAG TERM 486 521304 - 521325 + G 86 -7.3 -5.06414 | opp_overlap 521323, overlap 521281 AAAAATCCCTTCTAA CGCTCTTTT TTTT AAGGGAGCG TTTTTATTAGACGCG TERM 487 521606 - 521590 - g 77 -8.7 -3.83026 | opp_overlap 521590 521589 GGGGGCGATATTAAA GGGGTCA ATT TAACCCC CCTTTTTGAAGAGTT murD 520597 - 521865 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase HP0495 522122 - 521862 - | hypothetical protein HP0496 522513 - 522112 - | hypothetical protein TERM 488 522368 - 522350 - G 85 -7.4 -5.00616 | GCGGGGGTGAAAAAA TCCGCTTT GAT AGAGCGGA TAACAAACACGCCTT TERM 489 523289 - 523307 + G 71 -5.3 -4.52873 | TTTTTGGTTTGCTTT TCTATGC GATGA GCATGGA TTCTTTTTCTAAAGC TERM 490 523383 - 523393 + G 76 -3.2 -5.18643 | AGTGTTCACTTATTC CTTG GGG CAGG TTTTCTTTTCCTTAA HP0497 522742 - 524070 + | sodium- and chloride-dependent transporter TERM 491 524480 - 524443 - g 70 -8.6 -3.35046 | TGATTTGCCTAAAGA TTTAGAGCAGGCCAAA ATGCAA TTTAGCATGCTCCAAA ATGGCAGTTTAATCT TERM 492 524967 - 524984 + G 90 -4.1 -6.02919 | gap 1 CTAAAATGGGCATGA GCG-GGCA GAT TGTCTCGC TTTTTTTCTTTATGG TERM 493 525340 - 525328 - g 70 -7.7 -3.75153 | opp_overlap 525323 TTTCTTTAACGCAAA CGCTT TTA AAGCG TGGCATTTTAGCGTT HP0498 524081 - 525409 + | sodium- and chloride-dependent transporter TERM 494 526064 - 526033 - g 73 -6.6 -4.20367 | opp_overlap 526052, overlap 526038 526050 CCTTTTAATAAAGAA GGCAATCCTGAAAA CCAG TTTCCAGGACAACC TGTAATCGTTAAAGA TERM 495 526128 - 526146 + G 86 -10.2 -4.12738 | GTGTCGTTCGGTGAG CGCGGGGC AAC GCCCTGTG TTTCGTTTGGTGTGG HP0499 525424 - 526491 + | phospholipase A1 precursor (DR-phospholipase A) TERM 496 526685 - 526671 - g 85 -7.2 -4.9448 | overlap 526661 AGTCATTAAAGAAAA GCTTTT TTT AAAAGC CAGCGATTCCGATAT HP0500 526549 - 527673 + | DNA polymerase III subunit beta gyrB 527686 - 530007 + | DNA gyrase subunit B HP0502 530053 - 530217 + | hypothetical protein HP0503 530306 - 531046 + | hypothetical protein HP0504 531033 - 531182 + | hypothetical protein HP0505 531323 - 531787 + | hypothetical protein HP0506 531991 - 533202 + | hypothetical protein HP0507 533202 - 533840 + | hypothetical protein TERM 497 534921 - 534911 - g 70 -3.2 -4.86216 | ATAAAAAAGAAGAAA GAGT CAA ACCC AAAGAAAATGAGCGA HP0508 533851 - 535209 + | hypothetical protein TERM 498 535664 - 535654 - g 71 -6.8 -4.08692 | GAATGTCGCTGAAAA TGCC GGT GGCA TGCGTGCGGCTAAAT TERM 499 535823 - 535839 + G 70 -8.1 -3.66666 | GAGGGGTGTTTGGGC GTGATTT CTG AAATCAC TTTAAAGCTTTTAGC HP0509 535211 - 536590 + | glycolate oxidase subunit (glcD) HP0510 536612 - 537376 + | dihydrodipicolinate reductase TERM 500 537432 - 537452 + F 72 -4.8 -4.83269 | GATGAAATATTTCCC CTTTTTAG CCTTA CTAAAAGG TTTTTACTATACTAT TERM 501 537557 - 537524 - f 87 -11.1 -3.53444 | opp_overlap 537513 537512 537525, overlap 537520 537525 TTTTGCAAGAATTAA TCTTGCCTTGTGTGA TTAG TAACACAAGGCAAGT GTGATAAACCCTACT TERM 502 537525 - 537556 + F 100 -14.6 -2.78816 | opp_overlap 537525 537524 537520, overlap 537513 537512 TTTGCAAGAATTAAT CTTGCCTTGTGTGA TTAG TAACACAAGGCAAG TGTGATAAACCCTAC TERM 503 537556 - 537525 - f 100 -14.6 -2.71745 | opp_overlap 537513 537512 537525, overlap 537524 537520 TTTGCAAGAATTAAT CTTGCCTTGTGTGA TTAG TAACACAAGGCAAG TGTGATAAACCCTAC TERM 504 537619 - 537608 - f 71 -3 -5.18643 | opp_overlap 537592 CTAACTAAAATAAAA TGAA CAAT TTCA GTTAGGGCTTTATTA HP0511 537802 - 537918 + | hypothetical protein TERM 505 538209 - 538230 + T 72 -8.7 -3.11366 | overlap 538192 538208 TATTCTAAAATTTTA GAGTGGGAT TATT AACCCACTC ATTGTTTTAGCATGA HP0512 539682 - 538237 - | glutamine synthetase (glnA) TERM 506 540280 - 540262 - g 76 -3.1 -5.35224 | TTGATAAAAACAAAA GAAAGCC GAGCG AGCCTTC GGTAAAAATAGTGGA TERM 507 541813 - 541803 - g 74 -4 -5.13137 | GAAATAAAGGAAAAA CTAA AAA TTAG AGACGTTTCTAATAT HP0513 539973 - 541949 + | hypothetical protein rplI 542010 - 542462 + | 50S ribosomal protein L9 HP0515 542466 - 543008 + | ATP-dependent protease peptidase subunit TERM 508 543662 - 543648 - g 93 -5.8 -5.59564 | overlap 543634 ATAAAGTCAAAAAAA CTTTAA GCG TTAAAG AGGCTAAAGAAGCTC hslU 543008 - 544339 + | ATP-dependent protease ATP-binding subunit TERM 509 545028 - 545008 - g 79 -8.3 -4.06864 | opp_overlap 545005 TTTATAGAAGAAGAA CGCATAGAC AAG GTGTATGCG CGCATTATCGTAGAA era 544336 - 545244 + | GTP-binding protein Era HP0518 545241 - 546233 + | hypothetical protein HP0519 547152 - 546322 - | hypothetical protein TERM 510 546708 - 546694 - G 74 -6.4 -4.46212 | GCTTTTATTAGAAAA CATGCG AAC CACATG CCTATAAGTCTTGAG TERM 511 546830 - 546843 + g 76 -3.1 -5.31275 | TTGATAGCGTTTTCT GCATA AAAT TGTGC TTTTTTGTAATCCAC HP0520 547328 - 547675 + | cag pathogenicity island protein (cag1) TERM 512 549136 - 549124 - g 77 -4.9 -4.86613 | overlap 549130 GAAAATCAAAAGAAA CTAAA AGC TTTAG AAGCAGAGTTGAAAA TERM 513 549140 - 549130 - g 75 -5.4 -4.76478 | overlap 549124 CAAAAGAAACTAAAA GCTT TAG AAGC AGAGTTGAAAAAGAA TERM 514 549175 - 549159 - g 81 -2.9 -5.61881 | overlap 549161 GTTGAAAAAGAAAAA CGCTAAG AAA CCTAGAG TAGTGGAAGTGCCTG HP0522 548134 - 549579 + | cag pathogenicity island protein (cag3) HP0523 549589 - 550098 + | cag pathogenicity island protein (cag4) HP0524 552463 - 550217 - | cag pathogenicity island protein (cag5) TERM 515 552160 - 552130 - G 70 -3.4 -4.84527 | gap 1, opp_overlap 552135 552138 TCCATATATCAAAAA GATCATC-ATCGC TCTCAG GCGATCGATTATC ATCATAAAAATTACC HP0525 553464 - 552472 - | virB11-like protein TERM 516 552856 - 552866 + g 73 -5.4 -4.56978 | TTCGGTGTCTTCAAT GGAT ATG ATCC TTTCTTCTTTAGGGA HP0526 554068 - 553469 - | cag pathogenicity island protein (cag6) HP0527 559989 - 554206 - | cag pathogenicity island protein (cag7) TERM 517 555370 - 555353 - G 72 -8.5 -3.55444 | opp_overlap 555349, overlap 555368 CCGCCATTTTTGAAA TCCATTG GTAA CAATGGA TAACCTTTAGCCGCC TERM 518 559278 - 559296 + g 80 -2.4 -5.55769 | overlap 559279 TTTCTTCATCTAAAT TCTTTTGC TGA GTGAAAGG TTTTTTATTATCAAC TERM 519 559668 - 559686 + g 80 -2.4 -5.55769 | overlap 559669 TTTCTTCATCTAAAT TCTTTTGC TGA GTGAAAGG TTTTTTATTATCAAC HP0528 561572 - 560004 - | cag pathogenicity island protein (cag8) TERM 520 560739 - 560762 + g 77 -11 -2.89565 | opp_overlap 560737, overlap 560737 CACAACAAGATTAGT TCTCCAAGCG CTAT CGCTAGGAGA TAATTCTATGGAGTT HP0529 563232 - 561625 - | cag pathogenicity island protein (cag9) TERM 521 562801 - 562816 + g 82 -4 -5.38958 | GTCTAGCACGCTATC CATGGA TACA TCTATG TTTTTATTTATCAAT HP0530 563995 - 563237 - | cag pathogenicity island protein (cag10) HP0531 564381 - 565037 + | cag pathogenicity island protein (cag11) HP0532 565073 - 565915 + | cag pathogenicity island protein (cag12) TERM 522 565972 - 565961 - T 74 -7.2 -4.13648 | opp_overlap 565961 565962, overlap 565962 AAGGGTAGAGAGAAA CGCC AACG GGCG TTAGCTTTACTTGAT HP0533 566124 - 566035 - | hypothetical protein HP0534 566716 - 566126 - | cag pathogenicity island protein (cag13) TERM 523 567016 - 567002 - R 72 -5 -4.80487 | opp_overlap 567002 567014, overlap 567014 TACAACTAAAATAAA GAGTCA AGA TAACTC ATTTTCAAAAAGGAG TERM 524 567105 - 567121 + r 75 -8.1 -3.72241 | opp_overlap 567105 AAGCTCTGCGTGAAA GATGAAA AAA TTTCATC TTTAGATAGTTAATA TERM 525 567121 - 567105 - R 73 -8.1 -3.53343 | opp_overlap 567105 AAGCTCTGCGTGAAA GATGAAA AAA TTTCATC TTTAGATAGTTAATA HP0535 567522 - 567142 - | cag pathogenicity island protein (cag14) HP0536 568299 - 567955 - | cag pathogenicity island protein (cag15) HP0537 568723 - 569853 + | cag pathogenicity island protein (cag16) HP0538 569868 - 570788 + | cag pathogenicity island protein (cag17) HP0539 571583 - 570870 - | cag pathogenicity island protein (cag18) HP0540 572725 - 571580 - | cag pathogenicity island protein (cag19) HP0541 573848 - 572736 - | cag pathogenicity island protein (cag20) TERM 526 573217 - 573195 - G 73 -2.1 -5.28481 | gap 1, overlap 573216 CATGCAACTAAAAAA CACTT-TTGA TGAG CCAACAAGTG CACCTAAAGCGGTAC HP0542 574292 - 573864 - | cag pathogenicity island protein (cag21) HP0543 575153 - 574347 - | cag pathogenicity island protein (cag22) HP0544 578106 - 575155 - | cag pathogenicity island protein (cag23) TERM 527 575324 - 575309 - G 88 -9 -4.54727 | CCCCTCAAATTAAAA CTAGCG ATAA CGCTAG GGCTTCCATCCTGTT TERM 528 575600 - 575579 - G 78 -7.3 -4.37092 | opp_overlap 575566 ATGTCTCTTACAAAA TAAGCGACC TTTG GATCGCCTA AATATTTCCAAGCTT TERM 529 576117 - 576107 - G 70 -5.4 -4.4078 | opp_overlap 576107 GCCGCCCAAGCAAAA GGAT TTA ATCC TGTATCTGTCCCTAG TERM 530 577943 - 577931 - G 71 -6.3 -4.22748 | overlap 577926 GAGGAATAAATGAAA GTTTC AGG GAAAC CAAACAACCTATTCC HP0545 578738 - 578115 - | cag pathogenicity island protein (cag24) TERM 531 578585 - 578601 + g 93 -2.1 -6.23317 | opp_overlap 578588, overlap 578588 CTAAATTCGTATAAA CAAGCCC ATT GGGAGTG TTTTTTTCTTTTTCT HP0546 579087 - 578740 - | cag pathogenicity island protein (cag25) TERM 532 579148 - 579137 - H 86 -3 -6.19443 | opp_overlap 579137 TATATCAAAAAAAAA GTAT TTTT ATAC TATTCATACAAGCGC TERM 533 580091 - 580068 - g 74 -5.3 -4.72986 | GATCCTGATCAAAAA CCAATCGTT GATAAG AACGATAGG GATAACAGGCAAGCT TERM 534 580423 - 580404 - g 87 -5 -5.40464 | overlap 580420 GATGATAAAGAAAAA GCAGAGTT TTTG AAATCTGC CAAACAATCTTTTGC TERM 535 582420 - 582410 - g 82 -4 -5.48303 | ACAAGCTCAAAAAAA TGAA GAT TTCA ATACTGGAAAAAATT TERM 536 582660 - 582640 - g 93 -7.5 -5.42605 | TTAATAAAAAGAAAA CAGGACAAG TAG CTAGCCCTG AAGAACCCATTTATA HP0547 579921 - 583481 + | cag pathogenicity island protein (cag26) TERM 537 583537 - 583511 - T 78 -5.8 -4.92239 | opp_overlap 583514, overlap 583512 583514 CCAAAAACGCAAAAA CCACCCCTTGCT AAA AACAAGGGGTTT TTAATAAGTCAGCAT TERM 538 583536 - 583512 - T 78 -9.3 -3.53717 | opp_overlap 583514, overlap 583511 583514 CAAAAACGCAAAAAC CACCCCTTGCT AAA AACAAGGGGTT TTTAATAAGTCAGCA TERM 539 583514 - 583534 + T 100 -9.7 -4.7497 | opp_overlap 583512 583511 583514 AAAACGCAAAAACCA CCCCTTGCT AAA AACAAGGGG TTTTTAATAAGTCAG TERM 540 583534 - 583514 - T 89 -11.9 -3.31103 | opp_overlap 583514, overlap 583512 583511 AAAACGCAAAAACCA CCCCTTGCT AAA AACAAGGGG TTTTTAATAAGTCAG HP0549 585350 - 584583 - | glutamate racemase rho 586704 - 585388 - | transcription termination factor Rho TERM 541 586826 - 586813 - H 75 -8.1 -3.69976 | AAAAGATGCTAATAA GTGGC CCAT GCCAC AAGTGTTGAATTTCG rpmE 586968 - 587171 + | 50S ribosomal protein L31 HP0552 587196 - 588059 + | hypothetical protein HP0553 588072 - 588755 + | hypothetical protein TERM 542 589211 - 589227 + G 74 -5.1 -4.67038 | opp_overlap 589203 ATCTAAAGGATTGTC CAAATGG AAA CCCTTTG TTTTGGTTTTAGGGG TERM 543 589552 - 589526 - g 90 -3.2 -5.9873 | opp_overlap 589528 589540, overlap 589528 589538 GGATGAGAAAAAAAA TTCCTTTCAAAA GGT TTTTAAAAAAAA TTATTCTTTAGAAAC HP0554 588768 - 589733 + | hypothetical protein HP0555 589730 - 590551 + | hypothetical protein HP0556 591061 - 590624 - | hypothetical protein TERM 544 590773 - 590757 - G 72 -3.6 -5.16969 | overlap 590758 CATACAAAAAACAAA TGCGCT GGTAA AGCGCC AAGCAATAGTGAAAC HP0557 592468 - 591530 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 545 591840 - 591829 - G 72 -4.4 -4.69622 | ATATAACGCTAAAAA TGGA ATAT TCCA TCATAGCCAATTTGT HP0558 593729 - 592491 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 546 592907 - 592882 - G 71 -6.7 -4.08767 | gap 1, opp_overlap 592877 592890 TTCATGGCTCTAAAA GCCCCTTCGCCC TCA GGG-GCTGGGGC TGTGATATGGTTAGC TERM 547 593790 - 593770 - R 88 -11.9 -2.94888 | opp_overlap 593769 593770, overlap 593767 593783 AATTCAGTGAAACCA CCCCTTGCT TAA AGCAAGGAG CTTCCTAACTAAAGC TERM 548 593770 - 593790 + r 74 -9.7 -2.50816 | opp_overlap 593770 593767 593783, overlap 593769 AATTCAGTGAAACCA CCCCTTGCT TAA AGCAAGGAG CTTCCTAACTAAAGC TERM 549 593819 - 593804 - R 74 -7.6 -3.90291 | AGCTTCCTAACTAAA GCATTC CATT GAATGC TAACACGAAAGGCTT HP0559 594273 - 594037 - | acyl carrier protein (acpP) HP0560 594406 - 594326 - | hypothetical protein fabG 595247 - 594504 - | 3-ketoacyl-(acyl-carrier-protein) reductase rpsU 595501 - 595289 - | 30S ribosomal protein S21 HP0563 596852 - 595602 - | hypothetical protein TERM 550 596221 - 596186 - G 71 -6.5 -4.18494 | CAGCCCCATTTAAAA GGTA-TTTGTCTTCGTT ATGG AAC-AAGACAAAATACC CTCCAATACCCAATA TERM 551 596665 - 596655 - G 70 -5.4 -4.37092 | ACCTCTTGTATAAAA TTGG ATC CCAA AATTTGGAGTCAAAC HP0564 597100 - 597270 + | hypothetical protein TERM 552 597260 - 597276 + T 89 -10.9 -3.63805 | ATTGTGATTCTTCTA GTAGGCT TTA AGCCTAC TTTAAGGTATCAGCT HP0565 597940 - 597293 - | hypothetical protein dapF 598868 - 598047 - | diaminopimelate epimerase TERM 553 598235 - 598205 - G 78 -3.9 -5.24129 | gap 1, overlap 598206 598224 GCGTGTTATAAAAAA TGCGT-GCGGCGAT AAAA ACCGCCGCCATGCC TGTCCCGCAAGCCAG HP0567 598984 - 600030 + | membrane protein HP0568 600944 - 600177 - | hypothetical protein TERM 554 600466 - 600487 + g 93 -6.7 -5.40072 | opp_overlap 600465 600466 CTCGGCCATTTAAAG GTTTTTTGG ATAT TCAAAAAAC TTTTTTTAAACAAAC HP0569 602179 - 601079 - | translation-associated GTPase TERM 555 601266 - 601279 + g 78 -3.7 -5.1861 | ACCCCAGCAGCCACA GGCGC ACTA GAGCC TTTTTTAATCGTCCA TERM 556 601659 - 601700 + g 72 -4.7 -4.69464 | gap 1, opp_overlap 601668, overlap 601668 601692 TTCGCCGGTTTTAAT TCTTCTA-AATGCGTTTTTA AAC TCAAAGCGCATTCTAAAAGA TTTTTAGCGTCTTTT HP0570 603671 - 602181 - | leucyl aminopeptidase TERM 557 602990 - 603010 + g 76 -3.2 -5.31091 | TAAGAGAGGCTTTAT TGACCGCT AAAAA GGCGTTCA TTTTCTTTTCTTCTA TERM 558 603362 - 603338 - G 71 -7.2 -3.94933 | opp_overlap 603338, overlap 603336 TCAAGCCCAAAAACA GCGCTTTCAA GTTTT CTAAAAGCGC GTTATCTTTAGAATG HP0571 604297 - 603719 - | hypothetical protein HP0572 604851 - 604312 - | adenine phosphoribosyltransferase HP0573 605241 - 604909 - | hypothetical protein HP0574 605748 - 605293 - | ribose-5-phosphate isomerase B HP0575 606467 - 605769 - | hypothetical protein TERM 559 605920 - 605904 - G 74 -3.7 -5.08601 | overlap 605905 CCATTCCAATAAAAA CGCACTT TTA AAATGCA ACGCTAAAAAGCCTA HP0576 607348 - 606476 - | signal peptidase I (lepB) TERM 560 606549 - 606535 - G 70 -8.6 -3.35522 | overlap 606533 CAACGCTTTTAAACA TGCGTT CCC AACGCA CCAGATAGCGTTTTT HP0577 608226 - 607348 - | methylene-tetrahydrofolate dehydrogenase (folD) HP0578 610336 - 608300 - | hypothetical protein TERM 561 608871 - 608886 + g 75 -2.6 -5.24129 | gap 1 GATTTGGGGGTTTTT TCC-ACA AAT TGTTGGA TTTTTTCTAAAGGCA TERM 562 609335 - 609352 + g 74 -4.1 -5.0133 | opp_overlap 609337, overlap 609337 TTCAATAAAAGCAGA AAGCATG TGGG CATGCTC TTTTTTAACCAAGTC TERM 563 609350 - 609337 - G 73 -6.7 -4.2649 | opp_overlap 609335 609337 CAATAAAAGCAGAAA GCATG TGGG CATGC TCTTTTTTAACCAAG TERM 564 609337 - 609350 + g 71 -6.7 -4.13561 | opp_overlap 609337, overlap 609335 CAATAAAAGCAGAAA GCATG TGGG CATGC TCTTTTTTAACCAAG TERM 565 610305 - 610293 - G 75 -2.7 -5.29846 | overlap 610287 610294 AAGGTGAAATAAAAA CCTTT TAA AAAGA GCGAAAAAAGGGCAT HP0579 610896 - 610342 - | hypothetical protein HP0580 612021 - 610903 - | hypothetical protein HP0581 613016 - 611997 - | dihydroorotase HP0582 613994 - 613020 - | hypothetical protein TERM 566 613365 - 613382 + g 84 -7.7 -4.76233 | ATCAATATCCCTTCT GGTTTGG TTAT CCAAGCC TTTATTATTTTCTTG TERM 567 613748 - 613758 + g 72 -4.6 -4.74132 | GCGTGGGTTTAGGAG CGCC CTG GGTG TTTTTACTGGGATCT HP0583 614859 - 613978 - | hypothetical protein HP0584 615227 - 614856 - | flagellar motor switch protein HP0585 615965 - 615309 - | endonuclease III (nth) HP0586 619127 - 616194 - | hypothetical protein TERM 568 616452 - 616464 + gH 79 -4.9 -5.04175 | GGAAACTTCTAAATT CAAAT CCA ATTTG TTTTTGTCTAATTCA TERM 569 616848 - 616863 + gH 95 -9 -4.98255 | opp_overlap 616847, overlap 616859 CCCATGCACTAAATC CGCCAT GATC ATGGCG TTTTTATAATTGCCA HP0587 619045 - 620034 + | aminodeoxychorismate lyase (pabC) oorD 620219 - 620560 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorD TERM 570 621176 - 621166 - g 76 -3.2 -5.24129 | overlap 621174 CTGGGCGATAAAAAA GACT ACA AGCC TTATGGGGTCGCACA oorA 620560 - 621687 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorA oorB 621689 - 622510 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorB oorC 622510 - 623070 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorC TERM 571 624606 - 624625 + G 71 -5 -4.64766 | AAAACTGCTTTCATT TCAAACGC CTTT GCGTTTTA TTTTTAGCGTGTGGG TERM 572 625587 - 625567 - g 90 -9.1 -5.10497 | opp_overlap 625566 AACTCACCCAAAAAA GCCTTTAAA TTG CTTAAAGGC ATCATTAAAGATAAG TERM 573 626011 - 626000 - g 70 -3.6 -4.91852 | overlap 626004 GTTATGAAAAAGAAA GCGA CATC CCGC CAGATGAAAAGCGTA HP0592 623167 - 626172 + | type III restriction enzyme R protein (res) TERM 574 626533 - 626519 - g 71 -6.4 -4.17089 | CTCAAACTTTTAAAA TCCGCT TAC AGCGAA AAAATAAAGATGATT TERM 575 626717 - 626704 - g 79 -6.7 -4.60924 | GAAATTTTTTAAAAA CACTC AAGG GAGTG GGACGCATAGCGGGT HP0593 626246 - 628042 + | adenine specific DNA methyltransferase (mod) HP0594 628139 - 628303 + | hypothetical protein HP0595 628313 - 629785 + | hypothetical protein TERM 576 630132 - 630146 + F 73 -4.3 -5.09225 | GGCTTATTCTAATGC TCAAC TGCGT GTTGA TTTTTTAAATAAAGT TERM 577 630493 - 630476 - g 78 -2.7 -5.46276 | gap 1 AAGAGATAGAAAAAA TCGCTACC AAA AG-AGCGA CAATAAGAGTGGCAC HP0596 630259 - 630837 + | tumor necrosis factor alpha-inducing protein HP0597 632819 - 630840 - | penicillin-binding protein 1A (PBP-1A) TERM 578 631744 - 631759 + g 83 -3.2 -5.67063 | CGTTTGGCTTGCGTG GCGC GATTGAAA GCGC TTTTTTTATAATCAA TERM 579 632212 - 632200 - G 70 -3.3 -4.93296 | GTAGGATCATAAAAA CTCGG AGC CCTAG GCAAGGCGACTAGCA TERM 580 632486 - 632496 + g 81 -6.8 -4.77036 | opp_overlap 632485, overlap 632474 CCTCGGTGTAACGAC CGCT TTT AGCG TTTTTAATCATAGCG HP0598 633941 - 632820 - | 8-amino-7-oxononanoate synthase TERM 581 633204 - 633188 - G 72 -8.7 -3.53343 | opp_overlap 633188 AAGCGGTGGTGTAAA TCACGCT TTT AGCGCGA TTGGTTAAAAACTCT HP0599 635265 - 633964 - | hemolysin secretion protein precursor (hylB) TERM 582 634956 - 634966 + g 73 -5.4 -4.58395 | TATGGTATTCCCCCA CACA ACT TGTG TTTTTAGCCAATGAA HP0600 637118 - 635337 - | multidrug resistance protein (spaB) TERM 583 637233 - 637256 + H 74 -3.8 -5.24129 | overlap 637234 CCGATTATAGTTCCA ACCAAAAGCA AGGA TGCCTTTGGG TTTTTTATAACAAGG TERM 584 637234 - 637255 + H 70 -7.3 -3.73995 | overlap 637233 CGATTATAGTTCCAA CCAAAAGCA AGGA TGCCTTTGG GTTTTTTATAACAAG HP0601 637282 - 638814 + | flagellin A TERM 585 638839 - 638859 + F 100 -11.9 -5.05577 | AGGTGTTTGTATGGG GCTAACGCT TTA AGCGTTGGC TTTTTGCTTTAATTT TERM 586 639182 - 639195 + G 70 -5.9 -4.36914 | overlap 639183 AGCTTGCAGAGTGTG TCCGC CCTA GCGGG TTTTATAACCAAAAA HP0602 638932 - 639588 + | endonuclease III TERM 587 640078 - 640090 + G 93 -5.5 -5.54907 | opp_overlap 640078 TGAGCATAGAAGCAA GGGGT GGT ATCCC TTTTTATTTTATCCA HP0603 639633 - 640202 + | hypothetical protein TERM 588 640668 - 640651 - g 79 -8.5 -4.12942 | opp_overlap 640650 640651 TCAAACGCGCCAAAA GCTTTCT AGAG AGAAAGC GTTAATCGGTTTTTG hemE 640268 - 641290 + | uroporphyrinogen decarboxylase TERM 589 641549 - 641537 - g 75 -2.6 -5.2112 | opp_overlap 641541 641545, overlap 641538 641541 641545 AATACCATGAAAAAA GCGA TAAAG CCGC TTTGGGGCTTTATGA TERM 590 641643 - 641658 + G 88 -9 -4.60924 | opp_overlap 641626 641642 641640 641637 641645 GATGAAAAACCACAC CATCGC CAAA GCGATG TTTTTGCCCACTTTG HP0605 641299 - 642732 + | hypothetical protein HP0606 642743 - 643447 + | membrane fusion protein (mtrC) TERM 591 644557 - 644575 + G 91 -11 -4.41494 | CATGGGGACTTTTGC GCTCATCC AAT GGATGGGC TTTTCATTAAACATG TERM 592 645508 - 645497 - g 70 -3 -5.11033 | opp_overlap 645484 GAGAATTTGAAAAAA TTCT TATT AGAA AGCCCTGAATTAAAA HP0607 643460 - 646546 + | acriflavine resistance protein (acrB) HP0608 646630 - 647112 + | hypothetical protein TERM 593 647920 - 647909 - g 71 -7.2 -3.90291 | opp_overlap 647909 647908, overlap 647893 ATTTTGGCAACCAAA CCCC TAAT GGGG GCTTTAATGCTATGG TERM 594 650070 - 650080 + G 76 -6.8 -4.4261 | opp_overlap 650064 GCAAGATTACAGCGG CGCT AAC AGCG TTTTAGTGTTCAACC HP0609 647257 - 650973 + | hypothetical protein TERM 595 651310 - 651296 - g 74 -4.2 -5.06816 | AGCGCTCAAGAAAAA GCCAAT AAT AATGGC GGATCGATCTGGTTT TERM 596 654412 - 654450 + G 79 -10.4 -3.61356 | opp_overlap 654412 654411 654414 AATGATCAATAAAAT CATTGCTGATAAGGGCTT TGG AGGCGTTTATCAGCAAGG TTTAGGCTCCATACT TERM 597 654902 - 654915 + G 85 -6.7 -5.09225 | opp_overlap 654901 ACACTAGAAGCGAAT GCGAA TAAT TTCGC TTTTTTAGGTGCAAT HP0610 650987 - 656818 + | toxin-like outer membrane protein TERM 598 656825 - 656836 + T 88 -7.2 -5.03145 | GCGTTTTAAAAGGTG GGGG CTTA CCCC TTTTTTGAGCCATTA HP0611 657378 - 656878 - | hypothetical protein TERM 599 657190 - 657180 - G 79 -5.4 -4.87665 | TTCTAGCTACAAAAA TTGC CAA GCAA AAACAAAACAATGCG HP0612 657634 - 657395 - | hypothetical protein HP0613 658335 - 657634 - | ABC transporter, ATP-binding protein HP0614 658965 - 658630 - | hypothetical protein ligA 661039 - 659069 - | NAD-dependent DNA ligase LigA TERM 600 660060 - 660040 - G 71 -6.8 -4.10657 | CCACAGGCTCTAAAA GAGCGACC GGTGT GATCGCCC CGCTGCGCCCCACTT TERM 601 660805 - 660821 + g 70 -2.9 -5.06414 | overlap 660806 CATCTAAGCTCCACA TCCGCAT TAA ATGGGGG TTTTTATTGAACGAA TERM 602 661167 - 661139 - g 74 -6.1 -4.46155 | gap 1, opp_overlap 661165, overlap 661142 GAGATATTGACAAAA CGACTTCGTTGC ACTTAA ACAACGAAG-CG CAATTTCTGTGCTTT HP0616 661117 - 662058 + | chemotaxis protein (cheV) TERM 603 662179 - 662192 + G 80 -4.5 -5.24551 | opp_overlap 662179, overlap 662173 TAACACTTATAGAGA CCATG GAGG CGTGG TTTTTATTGATTTAA TERM 604 662549 - 662560 + G 81 -7.2 -4.62471 | ACTCGTAACACTCTA GCCC AAAA GGGC TTTTTAGAGATTGAA TERM 605 663419 - 663406 - g 71 -5.2 -4.5366 | TGAAAAAACCGAAAA CGGC TATCAT GCCG CGCACCACCCTTTTA aspS 662093 - 663826 + | aspartyl-tRNA synthetase TERM 606 664288 - 664315 + G 87 -8.6 -4.57569 | gap 1 ACCGCATGCGGGTGT TTTTGGATC-CGT TGG GCGAGATCCAAAA TTTTTACAAGAATAA adk 663843 - 664418 + | adenylate kinase TERM 607 664622 - 664604 - f 70 -8.2 -3.03903 | opp_overlap 664603 AAAATTCGTTCAAGA GCTTTATG ATG CACAAAGC ATGTTAAAATCCGAT TERM 608 665180 - 665153 - f 72 -3.4 -5.24291 | opp_overlap 665159 665160 AAAATTAAAAGAAAA CTCAACCGCTTC ATTG GAAGCATTTTAG CTCGGACAGAAGTGT HP0620 665747 - 666268 + | inorganic pyrophosphatase TERM 609 666265 - 666254 - T 72 -5.8 -4.52803 | GAGAAAGCGATAAAA GCCT ATCA AGGC TAAAGATTTTAAGGG TERM 610 666277 - 666304 + T 75 -4.8 -5.04987 | overlap 666278 AGGCTAAAGATTTTA AGGGTTTTGGCT CAAT AGCTTAAACCCC TTTTTTAACGCTCTT TERM 611 666278 - 666303 + T 75 -8.3 -3.61908 | overlap 666277 GGCTAAAGATTTTAA GGGTTTTGGCT CAAT AGCTTAAACCC CTTTTTTAACGCTCT HP0621 668698 - 666410 - | recombination and DNA strand exchange inhibitor protein TERM 612 666472 - 666485 + gT 76 -4.5 -5.06103 | opp_overlap 666451 666468, overlap 666470 CGTCGCTAAAGCTCA CCACT TTGG GGTGG TTTTTTAAAAATTCT TERM 613 667213 - 667203 - GT 73 -2.4 -5.26875 | TTTTCAATCAAAAAA TGCG GCA CGCC ATAGCGCAAAGCGGT HP0622 669021 - 668659 - | hypothetical protein TERM 614 668848 - 668833 - GR 73 -5.4 -4.56597 | opp_overlap 668833 668839 TTCCCCCCTTAAAAA CGCTCT TTGC AAAGCG ATCTCTTGTTGGTTT murC 670370 - 669021 - | UDP-N-acetylmuramate--L-alanine ligase TERM 615 669645 - 669659 + g 90 -3.6 -5.93809 | TTTTAAAATGTATTG GATATT ATA AATGTC TTTTTTTTCTAAAAC TERM 616 670323 - 670338 + g 75 -5.4 -4.66163 | ACCGATAAAATGGAT CTTGCA ATCT TGCAGG TTTTTGAGTAAAACT HP0624 671490 - 670363 - | hypothetical protein TERM 617 671222 - 671195 - G 87 -6.4 -5.34857 | TCAAATAAAACAAAA CTAGGGAAAT TGAATAAC ACTTCCCTAG ATCCTAGCGTGGAGA ispG 671610 - 672689 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase HP0626 672692 - 673897 + | tetrahydrodipicolinate N-succinyltransferase (dapD) HP0627 673909 - 674241 + | hypothetical protein HP0628 674290 - 674967 + | hypothetical protein TERM 618 674988 - 675001 + F 76 -5.3 -5.04265 | AAGAGATTACCACTT GCTTT GCGC AAAGC TTTTTCATCTTTTTT TERM 619 675029 - 675041 + F 95 -9.1 -5.03747 | opp_overlap 675028 TTTGGATAAATTCAG CCGCA AAT TGCGG TTTTTTCAAAAGTTT TERM 620 676549 - 676517 - g 77 -7.7 -4.13945 | opp_overlap 676517 676516 ATTTCTACCCCAAAA CCCCCACCCAA GAATGGCGCGA TAGGGTGGGGG ATTATTTCACTTTTG HP0629 675124 - 677169 + | hypothetical protein TERM 621 677197 - 677174 - T 90 -9.5 -4.20367 | overlap 677175 TTGTGGAATAAACAA GCCCCCCCA AAGAAA TGGGGGGGT TAAAAAAATTTTAAA TERM 622 677196 - 677175 - T 100 -13 -3.11738 | overlap 677174 TGTGGAATAAACAAG CCCCCCCA AAGAAA TGGGGGGG TTAAAAAAATTTTAA HP0630 677798 - 677214 - | modulator of drug activity (mda66) TERM 623 677698 - 677709 + g 76 -4.4 -5.1101 | opp_overlap 677698 ACTTCTAGCCCCAAA GACT CTAG AGTC TTTTTTGCATGGTCA TERM 624 678314 - 678294 - g 72 -8.4 -3.4439 | TACATCAACCTAGAA TACCATGA GACCA TCATGGTA GCGAGCGGTTTTCAA TERM 625 678405 - 678393 - g 77 -10.5 -3.36671 | ATTTTAATGGTAGAA GGGGG TAT CCCCC AAGGCACGGAATACT HP0631 677958 - 679112 + | quinone-reactive Ni/Fe hydrogenase, small subunit (hydA) TERM 626 679611 - 679587 - g 71 -5 -4.58685 | gap 1, opp_overlap 679596 679599, overlap 679575 AAAGCGGTTCAAAAA CGC-TTGAGCG ATTT CGCTAAAAGCG GATCTTTGGGGCCTT TERM 627 680772 - 680800 + G 75 -8.2 -4.07885 | CATTCTTTTGACCCA TGCATCGCATGC TCGGT GCATGTGATGGA TTTTAAAGGGCAGTC HP0632 679122 - 680858 + | quinone-reactive Ni/Fe hydrogenase, large subunit (hydB) HP0633 680871 - 681545 + | quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (hydC) HP0634 681542 - 682078 + | quinone-reactive Ni/Fe hydrogenase (hydD) TERM 628 682746 - 682733 - g 79 -6.7 -4.61633 | overlap 682709 AGACACTTTCAAAAA CGATG AAAT CATCG CCCAGCTACCCTATG TERM 629 683061 - 683050 - g 73 -5.8 -4.56775 | opp_overlap 683050 ATGGTTCTTTAAAAA CGCT TTTA AGCG TCAGTTTTGATTTTA HP0635 682080 - 683618 + | hypothetical protein HP0636 684017 - 683739 - | hypothetical protein TERM 630 683771 - 683781 + g 71 -4 -4.98758 | TGTTTTTAGCGAGTT GTTT GTA AAAC TTTTTGTCGCTTTTT HP0637 684598 - 684146 - | hypothetical protein TERM 631 685181 - 685191 + G 79 -3.2 -5.45726 | TTCTGTTCCTGGTAG CGGT TTA ATCG TTTTTTTACCCTATG HP0638 684774 - 685691 + | outer membrane protein (omp13) TERM 632 685718 - 685733 + T 80 -6.2 -4.81306 | overlap 685725 TACCGCTCTTTAGTT GGTTTT TTAA AAAACC TTATTTTTTATTAGC HP0639 686414 - 685734 - | hypothetical protein TERM 633 686059 - 686069 + g 73 -5.4 -4.59773 | CCTAAAGCGATATTG CTAG CCC CTAG TTTTTGCGCGTAAGA HP0640 686477 - 687685 + | poly(A) polymerase (papS) HP0641 687699 - 687926 + | hypothetical protein HP0642 687928 - 688581 + | NAD(P)H-flavin oxidoreductase TERM 634 688635 - 688618 - f 76 -5.5 -5.00765 | opp_overlap 688626, overlap 688619 AACCAACCATAAAAA GCTTGGC GTTA GCCAAGT GCTAATCTCTTAAAT TERM 635 688634 - 688619 - f 80 -9 -3.58832 | opp_overlap 688626, overlap 688618 ACCAACCATAAAAAG CTTGGC GTTA GCCAAG TGCTAATCTCTTAAA gltX 688746 - 690065 + | glutamyl-tRNA synthetase HP0644 690062 - 690355 + | hypothetical protein TERM 636 690460 - 690450 - g 80 -2.4 -5.65177 | opp_overlap 690450 AGATTTAGAAAAAAA GCCC GCC GGGA TCGTTAGGGATTATT HP0645 690364 - 692046 + | soluble lytic murein transglycosylase (slt) HP0646 692043 - 692864 + | UDP-glucose pyrophosphorylase (galU) HP0647 692876 - 693283 + | hypothetical protein HP0648 693286 - 694554 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 637 694569 - 694552 - f 71 -2.1 -5.45802 | gap 1, overlap 694556 CGCTTAAAAGAAAAA TAATCCAA GAT TTGG-TTA CAATAGCTAGAATAT aspA 694612 - 696018 + | aspartate ammonia-lyase TERM 638 696051 - 696070 + F 73 -7.8 -3.63744 | overlap 696049 CGCCTTCAAACTTTA CGCTCCCT TTAT ATGGAGCG TCTTTTGGGCGAAAC HP0650 696063 - 696653 + | hypothetical protein HP0651 698092 - 696662 - | fucosyltransferase TERM 639 697112 - 697078 - G 73 -7.4 -4.07568 | opp_overlap 697066, overlap 697079 TGTCGTTTTCTAAAA TCGTTTTAAAAAAATC TAG GATTTTTTTAAAACTC AAATCTTGGTAAAAG TERM 640 697111 - 697079 - G 78 -10.9 -3.04398 | opp_overlap 697066, overlap 697078 GTCGTTTTCTAAAAT CGTTTTAAAAAAATC TAG GATTTTTTTAAAACT CAAATCTTGGTAAAA TERM 641 697996 - 698007 + g 73 -5.8 -4.56597 | opp_overlap 697995 CATCTCCCCACCAAT TCGC CACA GCGA TTTTTAGGGGGGGGG HP0652 698755 - 698132 - | phosphoserine phosphatase (serB) HP0653 699273 - 698770 - | nonheme iron-containing ferritin (pfr) TERM 642 699531 - 699510 - H 83 -6.7 -4.76312 | TATAATATGTAAAAA GCATTCTTA AATC TAAAAATGC TACAATGTTTATCTT TERM 643 699977 - 699988 + G 76 -4.4 -5.055 | AAAGGCCATGACCGC TGCA GAAG TGCA TTTTTTAAGCGTTAA HP0654 699570 - 700652 + | hypothetical protein TERM 644 701284 - 701270 - gf 71 -6.4 -4.16279 | opp_overlap 701270, overlap 701282 TAGAGCATGCTAAAA CGGCTT TAA AAACCG CTTTAGAGGGGCAGG HP0655 700735 - 703485 + | protective surface antigen D15 HP0656 703397 - 704548 + | hypothetical protein TERM 645 705794 - 705758 - g 80 -4.5 -5.22943 | overlap 705769 ATCAAATCCAAAAAA TGAGTTTGAAAGAAATC AAT GATTTCATTAAAGCCCA CACCGAAATCAACGA HP0657 704554 - 705852 + | processing protease (ymxG) TERM 646 706505 - 706490 - g 77 -4.8 -4.85129 | opp_overlap 706490, overlap 706481 706498 AGTAGAGATTAAAAA TCTAAA TAGC TTTAGA TTCATTGCTAAAGCG TERM 647 706677 - 706692 + G 72 -3.2 -5.1356 | opp_overlap 706677, overlap 706679 CGCTATTTTAAAGAT CCGGAT TTGT ATCCTG TTTTTATTGATGAAA gatB 705849 - 707276 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 648 708308 - 708318 + G 71 -6.8 -4.10007 | GTCTTTATTTCGCAT GAGC AAG GCTC TTTTACGCCCGTTAT HP0659 707276 - 708520 + | hypothetical protein TERM 649 708553 - 708565 + G 71 -4.9 -4.59081 | CTTCAATTTCCTCTA TAAAG ATT CTTTA TTTTCTATCGCTTTA TERM 650 708666 - 708656 - g 88 -2.6 -6.01725 | overlap 708657 AAGAAAAACAAAAAA TTTT TAC AAAA ATTCGCCCAGAATCA HP0660 708530 - 709546 + | hypothetical protein rnhA 709533 - 709964 + | ribonuclease H TERM 651 710301 - 710318 + G 71 -7.1 -3.85698 | AAGATTATTTGCGCG TTTCTTC TTCT GAAGAAA TTTCTAACGGGAGAG TERM 652 710669 - 710655 - g 72 -10 -2.62293 | overlap 710654 AAGCCGAACAGCAAT GCGCTT ATC AAGCGC TTCAAAAACTGAAGG rnc 709973 - 710695 + | ribonuclease III HP0663 710692 - 711789 + | chorismate synthase TERM 653 712078 - 712066 - g 75 -7.7 -3.98009 | AGAAAACGCCAGAAA GGCTT TTG AAGCC AGGCTTAGGGCGGAA HP0664 711827 - 712342 + | hypothetical protein TERM 654 712678 - 712692 + G 79 -3.5 -5.41746 | gap 1, overlap 712678 CAATTCCACTATGGA GG-CGG CACG CCGACC TTTTTTTCGCCCATT HP0665 712342 - 713715 + | coproporphyrinogen III oxidase TERM 655 714662 - 714652 - g 89 -6.8 -5.24129 | GTCTTTTAGAAAAAA TCCC TAA GGGA AAAAAAGAGACTATC HP0666 713712 - 715013 + | glycerol-3-phosphate dehydrogenase TERM 656 715330 - 715312 - gf 74 -6 -4.32678 | overlap 715314 CCTTCAAACAAAGAA TACATCGC TGT GCAATGCA AATTCCATCAAAATA HP0667 715089 - 715346 + | hypothetical protein TERM 657 716787 - 716767 - gf 73 -7.6 -3.75505 | CTTGAAAAATTAGAA GAGCTCAA TCAAT TTGAGCCC AACACTTGCAAGGTT HP0668 715321 - 717144 + | hypothetical protein TERM 658 718038 - 718011 - gf 89 -4.3 -5.56673 | gap 1, opp_overlap 718019, overlap 718015 ATTTAGAAGAAAAAA CCA-ATAAAGGG GTGCT CCCTTTATATGA GGATTTGAAAGAAAA TERM 659 718033 - 718015 - gf 77 -7.5 -4.05512 | opp_overlap 718019, overlap 718011 AGAAGAAAAAACCAA TAAAGGG GTGCT CCCTTTA TATGAGGATTTGAAA TERM 660 718228 - 718207 - gf 73 -2.3 -5.19916 | gap 1, overlap 718199 718198 718196 718209 718221 AAAATACGGAAAAAA TTCCACATCT AGA AG-TGTGGGA AAAACCACACGAGAC TERM 661 719181 - 719196 + GF 72 -3.2 -5.04733 | overlap 719182 ATGGTAAAGATTTTA GCGCTT TGGT AAGCGA TTTTATTTCTGATTA HP0669 717059 - 719860 + | hypothetical protein TERM 662 720337 - 720356 + G 78 -3.7 -5.24129 | opp_overlap 720337 GACTTTATCCTACAA TCATTTT ATATTC AAAATGA TTTTTTATCCCAAAG HP0670 719857 - 721206 + | hypothetical protein HP0671 721328 - 722140 + | outer membrane protein (omp14) TERM 663 722159 - 722182 + F 100 -11.2 -4.67982 | AAAACGCTTGTTTTT CTCTAATTGA ATTT TCAATTAGAG TTTTCTTGCATAGAC TERM 664 722207 - 722227 + F 70 -4.1 -5.055 | overlap 722204 ATAGACCACCGCTTT CTTTTGAAA CAT TTTTGAAAG TTTTTTGAAAATTAG TERM 665 722781 - 722763 - g 72 -10.4 -2.72839 | AATCACCCCCAAGCA GCTTAAAG ACG CTTTAAGC CCCAAAACAAAAATG HP0672 722299 - 723471 + | aspartate aminotransferase HP0673 723553 - 724833 + | hypothetical protein TERM 666 724909 - 724897 - gf 83 -3.3 -5.65513 | TATCAACCAAAAAAA GAGAG TCG CGCTC GATCATGCTCAAATA HP0674 724805 - 725491 + | hypothetical protein TERM 667 725888 - 725900 + G 80 -6.2 -4.72846 | AAAAATTACAGGATC GCCC TACTC GGGC TTTTTAGCTATATAG HP0675 725498 - 726586 + | integrase/recombinase (xerC) HP0676 727154 - 726648 - | methylated-DNA--protein-cysteine methyltransferase (dat1) TERM 668 726853 - 726871 + g 76 -2.4 -5.46706 | overlap 726854 GGGTTATTAATGAGC TTTGCGAT TTC ATCGTAAC TTTTTGTTTTACCAT HP0677 727925 - 727158 - | hypothetical protein TERM 669 727828 - 727813 - G 73 -6.8 -4.17762 | GATTCTTCAAAAGAA TGCCCG GTTG CGAGCA TGATAGGGACAATGA HP0678 728149 - 728039 - | hypothetical protein HP0679 728987 - 728118 - | lipopolysaccharide biosynthesis protein (wbpB) TERM 670 728531 - 728541 + gr 72 -3.2 -5.04175 | overlap 728525 GCGTGATGTCAAACA CCTT GCT AGGG TTTTTGTCTAATTCG HP0680 731415 - 729049 - | ribonucleotide-diphosphate reductase subunit alpha TERM 671 729574 - 729586 + g 70 -9.1 -3.23711 | opp_overlap 729573 ATTGGCTTTATCAAT GGGGA AAA TCCCC TTACTCCATTCTGAA TERM 672 730288 - 730299 + g 72 -4.4 -4.79223 | AATGTATTCCTTAAT GATC TTGG GATC TTTTTCATACTCTAA TERM 673 731533 - 731546 + r 75 -2.5 -5.60993 | TAATGAGAATAAGTT TTAAA GTTT TTTAA TTTTTTTATACCCCC HP0681 732093 - 731587 - | hypothetical protein HP0682 732513 - 732133 - | hypothetical protein HP0683 733968 - 732667 - | UDP-N-acetylglucosamine pyrophosphorylase (glmU) TERM 674 734123 - 734111 - gH 72 -9.1 -2.71144 | opp_overlap 734111 TATGCCCTTTAATGA GCGCT GAT AGCGC TTTGCCTAGCGTCAA TERM 675 734111 - 734123 + GH 80 -9.1 -3.65902 | opp_overlap 734111 TATGCCCTTTAATGA GCGCT GAT AGCGC TTTGCCTAGCGTCAA TERM 676 734253 - 734271 + GH 76 -2.4 -5.42198 | gap 1, overlap 734246 AGTGATGACGAGTTT CACC-CG TTTGAT CGTGGTG TTTTCTTTTTTAAGG fliP 734056 - 734373 + | flagellar biosynthesis protein fliP 734342 - 734803 + | flagellar biosynthesis protein FliP HP0686 737146 - 734843 - | iron(III) dicitrate transport protein (fecA) TERM 677 735883 - 735864 - G 70 -2.8 -5.05116 | gap 1, overlap 735865 TTAGAAAGAACAAAA GGAGGCATG CGG CACACC-CC ATTAAAAATATCGGT TERM 678 737381 - 737360 - R 85 -8.1 -4.46233 | opp_overlap 737364, overlap 737364 TGAATTTTAAACAAA TAAAGGGCT TAAA AACCCTTTA TGGCTAGCCTTTTTA TERM 679 737377 - 737364 - R 70 -4.5 -4.78326 | opp_overlap 737364, overlap 737360 TTTTAAACAAATAAA GGGCT TAAA AACCC TTTATGGCTAGCCTT HP0687 739322 - 737394 - | iron(II) transport protein (feoB) TERM 680 739060 - 739046 - G 72 -10 -2.73619 | overlap 739045 AATTACGCTCTAAAT TGGTGG AAT CCACCA CATTAAGAATGAGAT TERM 681 739327 - 739347 + H 72 -3.3 -5.1286 | overlap 739328 ATTTCTTTCATTGGG TTTGAATGC TCC GCATTAAAG TTTTTCTAATTTTTA HP0688 739466 - 739966 + | hypothetical protein HP0689 739987 - 740277 + | hypothetical protein TERM 682 740468 - 740451 - f 74 -4.1 -5.20328 | overlap 740452 TGTGAAAAAAATAAA CGGATCG CCCT CAATCCA AAACAAAACCTAAAA TERM 683 740808 - 740798 - g 84 -6.8 -4.98255 | CCCTAATGACAAAAA CGCT TTT AGCG TCAATATGGTTTGCG HP0690 740559 - 741734 + | acetyl coenzyme A acetyltransferase (thiolase) (fadA) HP0691 741745 - 742443 + | 3-oxoadipate CoA-transferase subunit A HP0692 742440 - 743063 + | 3-oxoadipate CoA-transferase subunit B TERM 684 743201 - 743227 + G 71 -6.6 -4.05446 | TTCTTGTTTATTGCT TGACAGGGCAAG ACG CTTTTTCTGTCA TTTCTAGTTGGGGGA HP0693 743083 - 744447 + | short-chain fatty acids transporter HP0694 744572 - 745345 + | hypothetical protein TERM 685 746359 - 746349 - g 84 -6.8 -4.87786 | GCAATCTCATAAAAA CGCT GAA AGCG AGCGGATCGTTAGAG HP0695 745801 - 747942 + | hydantoin utilization protein A (hyuA) HP0696 747954 - 750251 + | N-methylhydantoinase HP0697 750262 - 750768 + | hypothetical protein TERM 686 750807 - 750793 - f 70 -7.1 -3.72695 | opp_overlap 750780 750779 750793 ATCCTTTTTATGAAA GAGGC TTTAT GCCTC TTGGTGCTAAAAGCT HP0698 750956 - 751045 + | hypothetical protein TERM 687 751256 - 751273 + G 88 -7.7 -5.0538 | overlap 751241 751271 GGGATTGCAGGCACT CCCTTTG AATG CGAAGGG TTTTTTAAAATCGCA HP0699 751085 - 752113 + | hypothetical protein TERM 688 752139 - 752163 + G 80 -2.3 -5.55769 | gap 1, opp_overlap 752139 752149 752160, overlap 752139 752160 CCCCCCAAAGCTAAA GGG-TTTAAA CGCCTT TTTAAAGCCC TTTTTTATTCTAAAG HP0700 752106 - 752492 + | diacylglycerol kinase (dgkA) TERM 689 753305 - 753290 - g 70 -3.3 -5.00234 | CAAAAAATAAAGAAA TCATC GTTTTA GATGA AATGCCTTTTCAAAC TERM 690 754141 - 754155 + G 75 -2.8 -5.28176 | opp_overlap 754143, overlap 754143 AGCACTTATGAAGAC GATTTC ATT GAAAAC TTTTTTGTGGCTAAC HP0701 752512 - 754995 + | DNA gyrase subunit A HP0702 754992 - 755468 + | hypothetical protein TERM 691 755581 - 755563 - g 77 -6 -4.59773 | overlap 755565 TGTGAGTTTTAAAAA CCCTAAAG ACG CTTTAGCG AAACTTGATGAAAGC TERM 692 756114 - 756095 - g 74 -4.9 -4.72272 | overlap 756076 756097 TTTGGGTATCAAAAA GGGGCGT TCACGG ACGCCAC AGCTCCTAAAATGGG HP0703 755465 - 756610 + | response regulator HP0704 757071 - 757181 + | hypothetical protein uvrA 760089 - 757282 - | excinuclease ABC subunit A TERM 693 758102 - 758114 + g 78 -2.7 -5.44721 | overlap 758103 ACAATCTCCACCCCA TTCAA GCT TTGAG TTTTTTTAGCATGGT TERM 694 758741 - 758710 - G 90 -3.8 -5.94713 | overlap 758712 ATCGTATAAAAAAAA CACCCTTTCTAAAA TCTC TTTTAAAATGGGTT CAGCGATCTTTTTTT TERM 695 758739 - 758712 - G 77 -6.4 -4.62054 | overlap 758710 CGTATAAAAAAAACA CCCTTTCTAAAA TCTC TTTTAAAATGGG TTCAGCGATCTTTTT TERM 696 759921 - 759901 - G 77 -6.1 -4.57073 | CACTTTGTCTAAAAA TTGCCTAGC ATA GCTGGACAA ACTCTCTAAATAGCG HP0706 760272 - 761093 + | outer membrane protein (omp15) TERM 697 761107 - 761095 - f 71 -7.7 -3.56821 | opp_overlap 761086 761093 761091 761073 761095, overlap 761086 ACTACACTTTTTAAA CCCTT TAA AAGGG TGTCTTTAAGCCCTT TERM 698 761118 - 761142 + F 80 -7.3 -4.59424 | overlap 761073 AAGGGTGTCTTTAAG CCCTTTTTA GTCCTTA TAAAAAGGG TTTTAGTTTGGATTT TERM 699 761827 - 761840 + G 70 -3.1 -4.84359 | GCTAAGGATTTGAGC GAGTT TTTA AGCTC TTTTTCTAAAAATAA mraW 761272 - 762198 + | S-adenosyl-methyltransferase MraW HP0708 762219 - 762563 + | hypothetical protein TERM 700 763150 - 763129 - g 75 -2.9 -5.1971 | ACTAAAAACTAAAAA CGGCCAG TATTTCGT CTCGCCG GATAACGGCACGCTG HP0709 762809 - 763711 + | hypothetical protein TERM 701 763748 - 763732 - f 73 -7.9 -3.75115 | overlap 763728 763733 TGTTTAGAAAATTAA GGGGCGT GAA ACGCCCT AACCGCTAAAGATGT TERM 702 763747 - 763733 - f 86 -11.4 -2.84587 | overlap 763732 763728 GTTTAGAAAATTAAG GGGCGT GAA ACGCCC TAACCGCTAAAGATG HP0710 763982 - 765964 + | hypothetical protein TERM 703 766231 - 766187 - g 76 -7.1 -4.17491 | overlap 766203 ATTAAACCCCTAAAA GCCCCCAAACTCAAAACTCAA TTT TTAAGGCGTGTGTTTGTGGGC GCGTCCATTAGGCGC HP0711 766154 - 767374 + | hypothetical protein HP0712 767374 - 767748 + | hypothetical protein HP0713 767733 - 768077 + | hypothetical protein HP0714 769333 - 768089 - | RNA polymerase factor sigma-54 TERM 704 768173 - 768190 + g 70 -2.7 -5.10461 | overlap 768175 GGTGATCGTTCTTCT TACCATT TTCA AATGGAA TTTTTCTTCAATGAG TERM 705 769144 - 769169 + g 74 -4.8 -4.78764 | AATGATCGCTACTCT TTTTAGCGCT AAAGCG ATCGCTAAAA TTTTTGATGCGTTTG HP0715 770058 - 769336 - | ABC transporter, ATP-binding protein HP0716 770472 - 770071 - | hypothetical protein TERM 706 770146 - 770156 + g 78 -2.6 -5.47914 | AATAGCTAAATCGTA TTTT TTT AAAA TTTTTTCTAATTTTT HP0717 772205 - 770469 - | DNA polymerase III subunits gamma and tau TERM 707 770702 - 770716 + g 75 -2.8 -5.19275 | overlap 770703 ATTTAAGCTCTTTAA CCACTT CTA AAGTGC TTTTATTTTCTGAAT TERM 708 771190 - 771206 + g 86 -9.5 -4.05629 | overlap 771194 771199 ATCGCATCGTCTAGG GCTTTGA ATT TCAAAGC TTCTTTGAATTTCAT TERM 709 771194 - 771220 + g 89 -9.6 -4.18018 | overlap 771190 771199 CATCGTCTAGGGCTT TGAATTTCAAAG CTT CTTTGAATTTCA TTTTCAATAACAACA TERM 710 771199 - 771215 + g 77 -8.1 -4.21922 | overlap 771190 771194 TCTAGGGCTTTGAAT TTCAAAG CTT CTTTGAA TTTCATTTTCAATAA HP0718 772906 - 772274 - | hypothetical protein TERM 711 772330 - 772314 - G 74 -6.5 -4.4448 | AAATCCCTAAATAAA GTAACGC TAA GCGTTCC CATGATAGCGGTTAC TERM 712 773298 - 773276 - g 85 -9.2 -4.16921 | opp_overlap 773279 773282 773289 GAAGAACTTTTAAAA TTAGCAGGCA CTC TGCCTTCTAA TGAGGCGATTGATTA HP0719 773114 - 773443 + | hypothetical protein HP0720 773436 - 773597 + | hypothetical protein TERM 713 773590 - 773574 - f 81 -4.3 -5.4505 | opp_overlap 773586, overlap 773577 GCTGTTAAGAAAAAA GACGAGC ATT GCTCTCC TAAGTGAGATAAATT TERM 714 773870 - 773852 - g 74 -5.2 -4.74132 | opp_overlap 773865 ATACGCGACTAAAAA CACAGACA AAA TGACCGTG GCGGATTTTGAAGCC TERM 715 774033 - 774018 - g 74 -4 -5.07053 | AAGCATGGCAAAAAA CATGAC AAAG ATCATG ACGATAAAGACCATG HP0721 773625 - 774083 + | hypothetical protein TERM 716 774130 - 774168 + F 75 -9.6 -2.80017 | opp_overlap 774114 774137, overlap 774129 774144 CTTCAAACCCTTCAA GCAGAAATCCTAAACGCT TTT AGCGTTTGGGATAAATGC GTTCTGTTAAGCGTT TERM 717 774161 - 774137 - f 100 -11.5 -4.05446 | opp_overlap 774130 774129 774144 CCCTTCAAGCAGAAA TCCTAAACGCT TTT AGCGTTTGGGA TAAATGCGTTCTGTT omp16 774515 - 776341 + | outer membrane protein TERM 718 776475 - 776429 - T 93 -8.2 -5.29885 | opp_overlap 776438, overlap 776433 776434 AAGTCAAAAACAAAA TAAACCAAATCACCCAATTATC TTT GATAATTGGGTGATTTAAGAGA ATCTTTCAATACTCT TERM 719 776471 - 776433 - T 100 -17.8 -5.098 | opp_overlap 776438, overlap 776429 776434 CAAAAACAAAATAAA CCAAATCACCCAATTATC TTT GATAATTGGGTGATTTAA GAGAATCTTTCAATA TERM 720 776470 - 776434 - T 100 -19.1 -3.6222 | opp_overlap 776438, overlap 776433 776429 AAAAACAAAATAAAC CAAATCACCCAATTATC TTT GATAATTGGGTGATTTA AGAGAATCTTTCAAT TERM 721 776438 - 776466 + T 100 -17.7 -3.55815 | opp_overlap 776434 776433 776429 ACAAAATAAACCAAA TCACCCAATTATC TTT GATAATTGGGTGA TTTAAGAGAATCTTT HP0723 777473 - 776481 - | L-asparaginase II TERM 722 777880 - 777897 + G 73 -7.7 -3.9281 | overlap 777882 GCAAATCAATTACCT TGCGCCA AGCG TGGCGTA TTGTTTAACGATACT TERM 723 778009 - 777979 - g 71 -6.2 -4.24204 | overlap 777982 777985 GAGCCAGAGCCAAAA CATCAAGCCTAAAG CGC CTTTAAGCTTAGCG GTAGTCTCTAGTCAA HP0724 777602 - 778933 + | anaerobic C4-dicarboxylate transporter omp17 780897 - 779008 - | outer membrane protein HP0726 782101 - 781184 - | hypothetical protein TERM 724 781730 - 781720 - GR 78 -6.8 -4.36914 | TGGCTTGGGATAAAA GGGT ATT ACCC CCCACTTTTTGACCT TERM 725 782081 - 782062 - GR 78 -2.8 -5.40474 | opp_overlap 782065, overlap 782065 AGCTGGCTAAAAAAA CAAGCGCT TTCA AACGCTTT TTTGATTCAATTCTA TERM 726 782065 - 782078 + gr 73 -2.3 -5.29385 | opp_overlap 782065 782062 TGGCTAAAAAAACAA GCGCT TTCA AACGC TTTTTTGATTCAATT TERM 727 782078 - 782065 - GR 72 -4.5 -4.79949 | opp_overlap 782065, overlap 782062 TGGCTAAAAAAACAA GCGCT TTCA AACGC TTTTTTGATTCAATT HP0727 783057 - 782071 - | transcriptional regulator, putative TERM 728 782646 - 782657 + gr 89 -4.4 -5.56568 | AGCCTAAACGCACTT TCAC GCTT GTGA TTTTTTTACTAGTGT HP0728 784161 - 783151 - | hypothetical protein TERM 729 783468 - 783456 - G 70 -3.3 -4.9218 | overlap 783457 TATCCACCATAAAAA GCGCA TTT TGCGA ATACTTAAAAAAAGT HP0729 785270 - 784203 - | hypothetical protein TERM 730 784744 - 784726 - G 78 -3.8 -5.26119 | overlap 784727 TTTCCAAAAACAAAA CGCATGAA ATT TTCTTGCA TGGTTAAATATTCTT HP0730 785584 - 785279 - | hypothetical protein TERM 731 785613 - 785639 + r 74 -6.6 -4.19238 | opp_overlap 785613 785612 785610 AAAGATTTAAAACAC CGCTTACTAG CCAAAAA CTAGCAAGCG TTTTAGCGTTGGCGC TERM 732 785639 - 785613 - R 79 -10.2 -2.8434 | opp_overlap 785613, overlap 785612 785610 AAAGATTTAAAACAC CGCTTACTAGCC AAA AACTAGCAAGCG TTTTAGCGTTGGCGC HP0731 787397 - 785676 - | hypothetical protein TERM 733 785768 - 785779 + g 76 -2.2 -5.4477 | overlap 785777 TTTCCAGACCTTGAG TGCA CTCT TGCG TTTTTTTAACGCTTT TERM 734 785874 - 785888 + g 71 -5 -4.57543 | GGTTTCATTATTGAT GAGATC TAA GATTTC TTGTTTTTGATTGTT TERM 735 786804 - 786814 + g 71 -4 -4.83722 | overlap 786801 786809 AACGTTTTCTTTTTT GATT TCA AATC TTTTGTTGTAATCTT HP0732 787743 - 787387 - | hypothetical protein HP0733 789257 - 787692 - | hypothetical protein HP0734 790696 - 789377 - | hypothetical protein HP0735 791159 - 790698 - | xanthine guanine phosphoribosyl transferase (gpt) HP0736 792277 - 791168 - | phosphoserine aminotransferase (serC) TERM 736 791747 - 791760 + g 71 -6.7 -4.06687 | opp_overlap 791723 791746 ACTCCCTCCAATGAG CGCAT CAAC ATGCG TTATTTCTAAAGGCT TERM 737 791836 - 791847 + g 81 -5.8 -5.00884 | GGTTAGTTTCTTTGA TCGC TTGA GCGA TTTTTTCCACAGGGT TERM 738 792497 - 792487 - g 72 -3.2 -5.0538 | GGGTATTCTAAAAAA GCTC CTG GAAC GATAGGGAGTTTAGT HP0737 792424 - 792900 + | hypothetical protein TERM 739 793073 - 793083 + G 78 -2.6 -5.47218 | GTTAAAAGATAGGAT TAAA TAT TTTA TTTTTTTAGATGAAA TERM 740 793646 - 793660 + G 79 -5.8 -4.84527 | opp_overlap 793645 GGCCGGTTGCAAGAT CAAAAA GGA TTTTTG TTTTTCCTATGTGGA ddl 792978 - 794021 + | D-alanyl-alanine synthetase A HP0739 794021 - 794746 + | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase TERM 741 795357 - 795328 - g 81 -11.5 -3.06831 | opp_overlap 795321 795318, overlap 795317 795346 TCAACGCGCATGCAA GCCCCAAAAGCGT CAAT ACCCTTTTAGGGC TTGCGAATGATATTA TERM 742 795895 - 795883 - g 78 -4.1 -5.29385 | AAGTGAATCAAAAAA TCATC ATA GACGA TAGCTTTAATGGGAA HP0740 794733 - 796214 + | UDP-MurNac-pentapeptide presynthetase (murF) HP0741 796224 - 796709 + | hypothetical protein HP0742 796774 - 797730 + | ribose-phosphate pyrophosphokinase HP0743 798936 - 797791 - | rod shape-determining protein (mreB) TERM 743 798191 - 798179 - G 77 -4.8 -4.84539 | TAAGCAAAGATAAAA TCGC TCGTT GCGA TAGGCAAGAATTTGA HP0745 800330 - 801313 + | hypothetical protein HP0746 801264 - 802523 + | hypothetical protein TERM 744 802577 - 802595 + G 86 -4.5 -5.50723 | opp_overlap 802576 802578, overlap 802578 TTAAACCTTTAGAAT ACCCCTT AATTG AAGGGGA TTTTTGTTTTCATAG TERM 745 802578 - 802594 + G 73 -8 -3.88807 | opp_overlap 802576 802578, overlap 802577 TAAACCTTTAGAATA CCCCTT AATTG AAGGGG ATTTTTGTTTTCATA TERM 746 803157 - 803146 - g 89 -5.8 -5.37345 | TGGAATGAGAAAAAA CACC GCCG GGTG CTAAGCGAAAAATTT trmB 802534 - 803715 + | tRNA (guanine-N(7))-methyltransferase HP0748 803712 - 804383 + | cell division protein (ftsE) HP0749 804370 - 805176 + | cell division membrane protein (ftsX) TERM 747 805358 - 805303 - g 100 -12.9 -4.1144 | gap 2 AAAAAACCAACTAAA CAGCCGTTTG-AGTTCTTTAG-GCGAA GCGA TCCGCTCTAAAGAGCTTCAAAAGGCTG AGATGGAGCGCCAAA TERM 748 805718 - 805698 - g 76 -4.7 -5.11613 | overlap 805699 ACAGCATTCAAAAAA TCTCATCCA TCA TAGATGAGC AAAAAACTCGTGAAG TERM 749 805717 - 805699 - g 70 -8.2 -3.65883 | overlap 805698 CAGCATTCAAAAAAT CTCATCCA TCA TAGATGAG CAAAAAACTCGTGAA TERM 750 805780 - 805768 - g 73 -7.7 -3.84992 | AACCGAACAAGATAA GCTCA TTT TGAGC ATGCAAAAAGATTAT TERM 751 806122 - 806106 - g 71 -5.1 -4.56597 | overlap 806108 CGCTCGTGTCAAAAA CCCCAAA CGC TTTGGTG CGTAATGTTTTAGAC HP0750 805169 - 806371 + | hypothetical protein HP0751 806464 - 806823 + | flagellar protein FlaG TERM 752 806941 - 806929 - g 71 -6.2 -4.26076 | GGACGCTGATGAAAA GGCG TTAAT CGCC CCCTTAGACAAGAAA TERM 753 808180 - 808214 + G 80 -10.8 -3.31196 | opp_overlap 808162 GGTGAGCATCACACG CCCCACTAATGAGGTC AAT GATGTGATTAGTGGGG TTAATATCACTTTGG fliD 806840 - 808864 + | flagellar capping protein fliS 808936 - 809316 + | flagellar protein FliS HP0754 809303 - 809542 + | hypothetical protein HP0755 809635 - 810267 + | molybdopterin biosynthesis protein (moeB) HP0756 810269 - 810415 + | hypothetical protein TERM 754 810538 - 810515 - g 86 -4.7 -5.43866 | gap 1, opp_overlap 810519 CAAGCGCTAAAAAAA CACC-CTAAA ACCAA TTTAGTGGTG TTGCAAGAATTAAAC TERM 755 811002 - 810988 - g 90 -3.5 -5.87996 | overlap 811001 TAATGAAGAAAAAAA GCGTC AGCAA AACGC ATGGGAGACCATTCA HP0757 810419 - 811297 + | beta-alanine synthetase-like protein HP0758 811424 - 812737 + | hypothetical protein TERM 756 813144 - 813160 + G 71 -5.3 -4.54727 | overlap 813152 TGTAGCGCTACCGAG TATTTTT TTA AAAAATA TTTTAGTTTCAGCGC HP0759 812800 - 814053 + | hypothetical protein HP0760 815442 - 814054 - | phosphodiesterase TERM 757 815095 - 815111 + g 72 -3.6 -5.11033 | opp_overlap 815096, overlap 815096 GGCTTCTTTTTCATA ACGCCT GATTA AGGCGC TTTTTTGGGCTTCTA HP0761 816147 - 815545 - | hypothetical protein HP0762 816317 - 816874 + | hypothetical protein HP0763 816883 - 817764 + | cell division protein (ftsY) HP0764 819059 - 817773 - | hypothetical protein TERM 758 818083 - 818094 + g 74 -4.4 -5.00616 | GTTGTTTTCGCTCTT TGGA TTCT TCCA TTTTTTCCCCAAAGC HP0765 819378 - 819070 - | hypothetical protein HP0766 820213 - 819389 - | hypothetical protein HP0767 820373 - 820299 - | hypothetical protein moaA 821442 - 820477 - | molybdenum cofactor biosynthesis protein A TERM 759 820724 - 820703 - G 71 -5.2 -4.62302 | CAAGATTGGCAAAAA TCATCGCT ATGCGG AGCGATAA TGCCAAATTGATAGC HP0769 821530 - 822135 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 760 823075 - 823062 - g 73 -2.3 -5.23292 | opp_overlap 823062 823063, overlap 823057 TTATAGAAAATAAAA CGCTC GCCA GAGAG CTTTATAGAGATGTG flhB 822128 - 823204 + | flagellar biosynthesis protein FlhB HP0771 824014 - 823277 - | hypothetical protein HP0772 825355 - 824033 - | N-acetylmuramoyl-L-alanine amidase (amiA) TERM 761 824796 - 824818 + g 76 -3.5 -5.19212 | TCCGCTTCTTTTTTA GGAATTTCT TTTTT AGGAATTTC TTTTTTAGTGCTCCT HP0773 826453 - 825362 - | hypothetical protein HP0774 827678 - 826470 - | tyrosyl-tRNA synthetase TERM 762 827305 - 827318 + g 81 -6.7 -4.80882 | opp_overlap 827304 827305 CAAGTGGAATTAAAG CACAC TTCG GTGTG TTTTTCATCTAAAAT HP0775 830029 - 827702 - | penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT) HP0776 830270 - 830016 - | DNA-directed RNA polymerase subunit omega pyrH 831004 - 830282 - | uridylate kinase TERM 763 830595 - 830585 - G 84 -8.2 -4.66163 | ATCCGTAGTGAAAAA CGGG TTT CCCG TGCCTGCGCCAAAAA HP0778 831795 - 831112 - | hypothetical protein TERM 764 831500 - 831515 + g 73 -5.4 -4.55295 | opp_overlap 831513, overlap 831496 831513 AGCGCTTGAGAGAGG GCGTTT GAAG AAGCGC TTTCTTTATCAAAAG TERM 765 831513 - 831532 + g 79 -3.6 -5.36441 | opp_overlap 831513, overlap 831500 831496 GGGCGTTTGAAGAAG CGCTTT CTTTATCA AAAGCG TTTTTTGTATCCACA TERM 766 831996 - 831971 - g 72 -8.3 -3.52113 | gap 1, opp_overlap 831971, overlap 831969 AGCGTTTCAGAAAGA GGAAGTGA-GGG TAT CCCGCCACTCCC TTTAAACGCTAAACA HP0779 831923 - 834484 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 767 834497 - 834517 + F 85 -9.1 -4.00868 | overlap 834502 TAGTTTTGTTTCCAT TAAAAGGGG CGA TCCCTTTTA TTTAATTATGGCTGA TERM 768 834502 - 834512 + F 73 -4.6 -5.02357 | overlap 834497 TTGTTTCCATTAAAA GGGG CGA TCCC TTTTATTTAATTATG HP0780 834559 - 834831 + | hypothetical protein TERM 769 836288 - 836278 - g 74 -4 -5.0538 | opp_overlap 836278 CCGCATTTTAAAAAA TCTT TTC AAGA GAATTTAGAAGACAA HP0781 835102 - 836391 + | hypothetical protein TERM 770 836396 - 836386 - f 86 -4 -5.80364 | opp_overlap 836392, overlap 836392 AGCGGAACAAAAAAA GAAT AAT ATTC AGATAATTATTTGAA TERM 771 837800 - 837790 - g 73 -6.8 -4.15222 | AGCCCTTTTAATAAA GCCT TTA AGGC GAACACGCAAGACAG HP0782 836485 - 837852 + | hypothetical protein TERM 772 837882 - 837906 + T 74 -6.5 -4.4715 | opp_overlap 837882, overlap 837866 GCTTGGTAGAATTGA GCCATTGTTTT TGG AAATTAATGGC TTTTCTCAATTCGGC HP0783 838356 - 837859 - | hypothetical protein TERM 773 838149 - 838166 + g 70 -2.7 -5.14965 | GTTTAGGCTCTAAGA TCAAGCG CAAA TGTTTGA TTTTTTCATGCAAAT TERM 774 838355 - 838345 - G 73 -2.4 -5.19275 | opp_overlap 838345 ACTCACAAAATAAAA GGGC AAC GCCA CCTTCTAAAACGAGA HP0784 838719 - 838853 + | hypothetical protein lolA 839432 - 838878 - | outer-membrane lipoprotein carrier protein secA 839580 - 842177 + | preprotein translocase subunit SecA TERM 775 842823 - 842833 + G 75 -8.2 -3.9712 | overlap 842801 CGCGATCAGGAGGTT GCCC TTA GGGC TTTATGATGGGGTGC TERM 776 843311 - 843331 + G 77 -6.1 -4.57882 | CGCTCACTCTAATAG GCTCTGTGA TCA TCGTAGGGC TTTCTTCTTATTACC HP0787 842167 - 843399 + | hypothetical protein TERM 777 844513 - 844529 + G 74 -5.1 -4.82548 | ATTTGGAATTACAAG GGTTGGA GCA TTCAGCC TTTTGTCTATTTTTC HP0788 843679 - 845178 + | hypothetical protein TERM 778 845214 - 845191 - T 80 -9.7 -3.54935 | opp_overlap 845197 845197, overlap 845194 845197 TAAACCCTCTTCAAA TAACAACCC TTTAAG GGGTTGTTA AAACGCCTAGCAAAA TERM 779 845207 - 845197 - T 71 -6.8 -4.08557 | opp_overlap 845197 845197, overlap 845194 845191 CTCTTCAAATAACAA CCCT TTA AGGG GTTGTTAAAACGCCT HP0789 845403 - 845257 - | hypothetical protein TERM 780 845484 - 845443 - R 100 -15.3 -3.2964 | gap 1 AAATTCTTTTTATAA GGGGAT-AGGGGGGTATTTT GCG ATAATACCCCCCTTAACCCC CTTAAGATCCCCCTA TERM 781 845534 - 845549 + r 80 -9 -3.59733 | overlap 845544 TTTCAAGAGGCTATC GCTTGC TTAC GCAAGC TCTTTGCTATTTAGT HP0790 846835 - 845540 - | anti-codon nuclease masking agent (prrB) TERM 782 845600 - 845615 + g 75 -2.6 -5.35222 | CAATAATTTTTCTCG GTAATA TTCG TATTGC TTTTTTCTCGCTTTT TERM 783 846521 - 846483 - G 70 -8.5 -3.33419 | gap 1, opp_overlap 846486 846489, overlap 846477 846486 846510 846511 846515 ATGTCTAAAGCAAGA TCA-CAATTCGCTTTTTT GCTT AAAAAAGTGAATTGTTGA TTCGCTAACGAATCA TERM 784 846517 - 846486 - G 73 -10.4 -2.83396 | opp_overlap 846486 846489, overlap 846483 846477 846510 846511 846515 TCTAAAGCAAGATCA CAATTCGCTTTTTT GCTT AAAAAAGTGAATTG TTGATTCGCTAACGA TERM 785 846486 - 846517 + g 87 -12.6 -3.37344 | opp_overlap 846486 846483 846477 846510 846511 846515, overlap 846489 TCTAAAGCAAGATCA CAATTCGCTTTTTT GCTT AAAAAAGTGAATTG TTGATTCGCTAACGA TERM 786 846489 - 846514 + g 77 -8.5 -3.82604 | opp_overlap 846486 846483 846477 846510 846511, overlap 846486 AAAGCAAGATCACAA TTCGCTTTTTT GCTT AAAAAAGTGAA TTGTTGATTCGCTAA TERM 787 846545 - 846510 - G 77 -4.8 -5.00616 | opp_overlap 846489 846486, overlap 846486 846483 846477 846511 846515 TTTTTGCTTAAAAAA GTGAATTGTTGATTCG CTAA CGAATCAACGATTAAA AGGGCATGCTCTCCT TERM 788 846544 - 846511 - G 72 -8.3 -3.60048 | opp_overlap 846489 846486, overlap 846486 846483 846477 846510 846515 TTTTGCTTAAAAAAG TGAATTGTTGATTCG CTAA CGAATCAACGATTAA AAGGGCATGCTCTCC TERM 789 846540 - 846515 - G 74 -9.1 -3.52177 | opp_overlap 846486, overlap 846486 846483 846477 846511 846510 GCTTAAAAAAGTGAA TTGTTGATTCG CTAA CGAATCAACGA TTAAAAGGGCATGCT HP0791 848937 - 846877 - | cadmium-transporting ATPase, P-type (cadA) TERM 790 848652 - 848626 - G 71 -3.7 -4.88228 | opp_overlap 848626 848625, overlap 848628 AGCCAACACGAAAAA CATAGCCTTTT CAATC AAAGGGCTAGG GTTTAGGTGCAAGAT TERM 791 848830 - 848847 + g 70 -2.7 -5.06451 | AAACAACTTACTGGT GCTGAAA TTGA TTTGAGC TTTTTTCACATAGTC HP0792 850482 - 848962 - | sigma-54 interacting protein TERM 792 849326 - 849337 + g 70 -3.6 -4.9218 | opp_overlap 849324, overlap 849330 CTATCCAAAAAAGGC TCGC TCAA GCGG TTTTTATACTGCGTG TERM 793 849571 - 849558 - G 84 -2.4 -5.86965 | opp_overlap 849569 ATTCATCAAAAAAAA GCAT GCCGTT ATGC GCTAGCGCGATTTCG TERM 794 849930 - 849948 + g 73 -2.4 -5.22312 | CTTTATCGTTCAATT CTATCGTT TTA AAGGGTAG TTTTTTCGTGTGGGT def 851012 - 850488 - | peptide deformylase TERM 795 850567 - 850553 - G 73 -7.2 -4.09685 | TCTTACGCTTCAAAA TGGATA ATT TATCCA CGAATAACACGCCAT clpP 851607 - 851017 - | ATP-dependent Clp protease proteolytic subunit tig 852980 - 851625 - | trigger factor TERM 796 851906 - 851896 - G 73 -5.4 -4.5442 | opp_overlap 851896 GCGTCAATGATAAAA GTGA TTT TCAC GCTTTTTGTCGCATC HP0796 853928 - 853092 - | outer membrane protein (omp18) HP0797 854739 - 853957 - | flagellar sheath adhesin hpaA moaC 855334 - 854858 - | molybdenum cofactor biosynthesis protein C mogA 855873 - 855343 - | molybdenum cofactor biosynthesis protein HP0800 856323 - 855886 - | molybdopterin converting factor, subunit 2 (moaE) HP0801 856548 - 856324 - | molybdopterin converting factor, subunit 1 (moaD) ribA 857199 - 856621 - | GTP cyclohydrolase II TERM 797 857094 - 857075 - G 74 -5 -4.82901 | overlap 857091 GGGTTTTGAGAAAAA TTAGGGGT GAAA ACCACTAA ATGATCTTTAGAGCC HP0803 858127 - 857288 - | hypothetical protein HP0804 859250 - 858216 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 798 858481 - 858466 - G 70 -2.6 -5.02074 | TCAGTCGTTAAAAAA TCAAAA TCCT CTTTGA TAGGGTGGAAACGCA HP0805 860275 - 859421 - | lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B) TERM 799 860908 - 860922 + G 79 -10 -3.53444 | opp_overlap 860905 TTGCCCTAATTACCG CGCTCT AAG AGAGCG TTTAAAACAAAATAC HP0806 860357 - 860977 + | hypothetical protein HP0807 863357 - 860994 - | iron(III) dicitrate transport protein (fecA) TERM 800 863318 - 863308 - G 71 -6.8 -4.08285 | GACAAAAAAGTCAAA GCGT TCA ACGC TAAAAAATAAGAGGT acpS 863910 - 863551 - | 4'-phosphopantetheinyl transferase TERM 801 863859 - 863834 - G 89 -7 -5.24129 | opp_overlap 863834 863856 863857, overlap 863857 CTTGGCGATAAAAAA CGCTCTAAAA ACTTCA TTTTAAAGCG TTTCACGCACTTTTC fliL 864468 - 863917 - | flagellar basal body-associated protein FliL HP0810 865079 - 864477 - | hypothetical protein TERM 802 864815 - 864829 + g 73 -2.1 -5.27476 | gap 1, opp_overlap 864815, overlap 864810 AAATATTTTCTAAAA GCGTCT TATA AG-CGC TTTTGTTTTGTTCAA HP0811 865384 - 865058 - | hypothetical protein TERM 803 865388 - 865378 - G 78 -2.6 -5.47159 | overlap 865372 TGCAAGAAAGAAAAA TTTT CAA AAAA CCCCCTTTATCCCAT HP0812 866847 - 865837 - | hypothetical protein TERM 804 866088 - 866072 - G 74 -3.7 -5.00895 | CGCACCAGAGAAAAA TTGACAT CAT AGGTCAA ATCGCTTTGCTGATA HP0813 866980 - 867597 + | hypothetical protein TERM 805 867927 - 867959 + G 74 -6.4 -4.46212 | opp_overlap 867934 867951 AGAACGCTTTAAGGC TCATAACGCTCTTT CTCTC ATAGAGCCTTATGA TTTTATCATAGACGC TERM 806 868095 - 868111 + G 93 -10.1 -4.72272 | CGTTTTACCCCATAG CGCATGC TTA GCGTGCG TTTTTGATAAGCCCC TERM 807 868124 - 868156 + G 84 -7.7 -4.66953 | opp_overlap 868134, overlap 868125 GCGTTTTTGATAAGC CCCCTAAAAAGGGAT TAA ATCCCATTTCAGGGC TTTTTGGGGTCTTAC TERM 808 868125 - 868155 + G 85 -11.2 -3.39449 | opp_overlap 868134, overlap 868124 CGTTTTTGATAAGCC CCCTAAAAAGGGAT TAA ATCCCATTTCAGGG CTTTTTGGGGTCTTA TERM 809 868146 - 868134 - g 82 -7.7 -4.58283 | opp_overlap 868125 868124 TAAGCCCCCTAAAAA GGGAT TAA ATCCC ATTTCAGGGCTTTTT TERM 810 868335 - 868289 - g 76 -2.4 -5.44119 | gap 1, opp_overlap 868305, overlap 868274 868294 868297 868305 TGGATTTTAAAAAAA TTCAAGCAC-CCAAAAACCCT GAATGT AGGGTTTGTGGCACGCATAAA ATCACGCATTTACAG HP0814 867598 - 868365 + | thiamin biosynthesis protein (thiF) TERM 811 868835 - 868864 + G 86 -12.2 -3.34501 | overlap 868818 868825 AGACGGCCGGTGAGA CCGCTCCTACTA TGGGGT TAGTGGGGGCGG TTATGGGGCTTATGT HP0815 868381 - 869154 + | flagellar motor protein MotA TERM 812 869624 - 869610 - g 75 -5.6 -4.7329 | opp_overlap 869609, overlap 869612 AAAATCATTCAAAAA CTCCCT AAA AGGGTG CATATTAATGTGAGA motB 869157 - 869930 + | flagellar motor protein MotB HP0817 869927 - 870373 + | hypothetical protein TERM 813 871748 - 871766 + G 76 -7.5 -4.17089 | overlap 871742 CTTTTAAGGGCTTAG TGAAAGC TTATC GCTTTCA TTTTAGAAGTTTGCA HP0818 870442 - 872103 + | osmoprotection protein (proWX) TERM 814 872282 - 872272 - g 71 -6.8 -4.08216 | opp_overlap 872253 TTAGGGCTTTTAAAA CCCA GTT TGGG GAGCGTTAAAATCTT TERM 815 872765 - 872723 - g 74 -4.3 -4.88067 | gap 1, overlap 872737 AGTTAGCCACAAAAA CCCTAGAAATCAAAGCCCTT AAAC AAGAGCAGTGATTT-TAAGG CTGATTTAAAAATTC HP0819 872107 - 872757 + | osmoprotection protein (proV) HP0820 872931 - 873392 + | hypothetical protein TERM 816 874518 - 874507 - g 76 -2.2 -5.4833 | TTAGCCAAGAAAAAA CCTC TAAT GAAG ATCTGATTTTAGAAG uvrC 873393 - 875177 + | excinuclease ABC subunit C TERM 817 875507 - 875497 - g 73 -6.8 -4.23213 | opp_overlap 875504 GTTACAGCCAATAAA GCCA TGT TGGC GTATCACCGCTATGA HP0822 875188 - 876453 + | homoserine dehydrogenase HP0823 876454 - 876798 + | hypothetical protein HP0824 876887 - 877207 + | thioredoxin (trxA) TERM 818 877280 - 877296 + G 90 -8.7 -4.86731 | opp_overlap 877278 TTACGCCACTAGAGG CGGTGTT AAA AACGCCG TTTTGTTTGAAAAAG TERM 819 877718 - 877741 + G 71 -6 -4.18018 | opp_overlap 877718 CATCTGCAAAAAAGT CTATCTCATC CACA GAAGAGATGG TTTTAGGTGCGCGCC HP0825 877212 - 878147 + | thioredoxin reductase (trxB) TERM 820 878182 - 878154 - f 72 -9 -2.74415 | opp_overlap 878154 878161, overlap 878153 878161 CACCATTAAATCAAG CTTATAACCCTA GATTT TAGGGTTATGAG TTCTCGCTTCAAACA TERM 821 878154 - 878182 + F 91 -11.9 -3.41878 | opp_overlap 878153 878154 878161, overlap 878161 CACCATTAAATCAAG CTTATAACCCTAG ATT TTAGGGTTATGAG TTCTCGCTTCAAACA TERM 822 878314 - 878300 - f 83 -5.8 -5.22943 | opp_overlap 878293 ATCAAATTTAAAAAA GTTTTA TTG TAAAAC AGAGCCTAAAAACGA HP0826 878363 - 879184 + | lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B) TERM 823 879209 - 879198 - T 71 -2.2 -5.3321 | AATTAATAACAAAAA CACT AAAG AGCG TTTTAAAATTTTAGT TERM 824 879364 - 879386 + T 85 -10.8 -3.1883 | opp_overlap 879362 879361 TAAGAGAATGAAGCG CATTAGAAAA TTA TTTTCTAATG TTACTAAGACTTTTT HP0827 879638 - 879390 - | ss-DNA binding protein 12RNP2 precursor HP0828 880643 - 879963 - | F0F1 ATP synthase subunit A TERM 825 880677 - 880695 + r 85 -9 -4.10429 | opp_overlap 880691 880692 CTTATTGAAAATTTC CTTAATTG TAG CAATTAAG TTTTAAAAACTCATT HP0829 882210 - 880765 - | inositol-5-monophosphate dehydrogenase TERM 826 880804 - 880817 + g 79 -6.7 -4.64861 | TTTAGTAATATCCAC GCCAT GCAC ATGGC TTTCTTTTAACCCCG gatA 883581 - 882220 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 827 883001 - 882987 - G 85 -7.2 -4.87803 | opp_overlap 882986 882989 TAGCGTCAAATAAAA TAGAAG CGT CTTCTA CATTTTGCGTGATAG TERM 828 883206 - 883216 + g 72 -3.2 -5.00895 | CTCCGCTACTCCCTC CAGG CAC TCTG TTTTTATCTCGTGGG coaE 884230 - 883640 - | dephospho-CoA kinase TERM 829 883717 - 883729 + g 74 -4.7 -4.86133 | opp_overlap 883717 TGTCTATAATATAAT CGCTC ATG GCGCG TTTTTGCTCTATATC speE 885020 - 884232 - | spermidine synthase TERM 830 884833 - 884845 + g 76 -9.1 -3.70902 | opp_overlap 884833 CAACCCCCCATATGA GCGAG CAA CTCGC TTTCAATGTGCAAAA HP0833 885990 - 885112 - | hypothetical protein TERM 831 887160 - 887145 - g 77 -6.2 -4.59117 | opp_overlap 887145 887144 AAATCAAGCATAAAA TCATAG AAGT CTATGA GTGTTTTTCCAAACG engA 886067 - 887443 + | GTP-binding protein EngA TERM 832 887532 - 887552 + F 83 -8.3 -4.19472 | opp_overlap 887532 887535 GCTCAATCAATCAAG CTAGGCGAT TGA ATCGCTTGG TTTTGGCATCTATTA HP0835 887585 - 887869 + | histone-like DNA-binding protein HU (hup) HP0836 888471 - 888830 + | hypothetical protein HP0837 888773 - 889081 + | hypothetical protein HP0838 889101 - 889718 + | hypothetical protein TERM 833 889707 - 889697 - f 79 -6.8 -4.57218 | AGAAGATAATGAAAA CGCT GAC AGCG AGCTCCAATGAAAAA HP0839 889715 - 891478 + | outer membrane protein P1 (ompP1) HP0840 891482 - 892483 + | flaA1 protein TERM 834 893744 - 893726 - g 71 -6.8 -4.1196 | AAGCGAGCTTTAAAA TCCTTGAT TTT ATCAAAGA CAACGCCCTTTAATG HP0841 892480 - 893757 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 835 894287 - 894264 - g 80 -4.6 -5.22039 | opp_overlap 894264 GTGAAAGCCAAAAAA CAAAGCGT TGATTTTT ACGCTCTG TATCCTAACTTGGGC HP0842 893757 - 894494 + | hypothetical protein HP0843 895178 - 894519 - | thiamin phosphate pyrophosphorylase/hyroxyethylthiazole kinase (thiB) TERM 836 894754 - 894740 - G 73 -5.7 -4.56775 | ATGGTGTGGGAAAAA TAGGG CCTAC CCCTA AATAGGCTACGGCGT HP0844 895983 - 895171 - | thiamine biosynthesis protein (thi) TERM 837 895339 - 895351 + g 70 -3.3 -4.87626 | AGAAAGAGTGCAGCC CGTGC CAT GCGTG TTTTTCGTGTTGAAG HP0845 896798 - 895977 - | hydroxyethylthiazole kinase HP0846 899443 - 896843 - | type I restriction enzyme R protein (hsdR) TERM 838 899747 - 899760 + r 81 -2.3 -5.96521 | overlap 899746 TTCTAGCTCTGCTTC GCTCT CATA AGCGC TTTTTTTTCATTACT HP0847 899835 - 899734 - | hypothetical protein HP0848 900733 - 899837 - | type I restriction enzyme S protein (hsdS) TERM 839 899882 - 899897 + g 70 -2.6 -5.08011 | CAGTAGTTTTTCTCG GTAATA TTCG TATTGC TTTTTTCGGGCTTTT TERM 840 900129 - 900119 - G 70 -2.6 -5.10601 | ATAAAAGTATAAAAA TTTT GTT AAAA GCTCGTTAGTGTCTT TERM 841 900337 - 900351 + g 88 -2.8 -6.02919 | TTACTTCACTTACTT CGCTTA TTT TGAGTG TTTTTTTATTTGTGC HP0849 901125 - 900835 - | hypothetical protein TERM 842 901100 - 901115 + g 73 -5.4 -4.54477 | overlap 901063 901062 901102 TTAGGCGCTAGAGTT TGGAGC AGTT GCTCTA TTTTATGCATTTTGC HP0850 902701 - 901118 - | type I restriction enzyme M protein (hsdM) TERM 843 901378 - 901388 + g 79 -6.8 -4.63592 | TCTTTTCTCGGTTGC GCTC TTT GAGC TTGTTTTTCTTGCCC HP0851 902875 - 903558 + | hypothetical protein TERM 844 903681 - 903623 - T 88 -12.1 -2.80077 | gap 2 TTTTGATAAAACTCA TTCTCTTAAGGGGA-TA-GGGGGTATTTT GCG ATAATACCCCCTTAACCCCCTTAAGAAAC CCCCTAACCCCCAAG TERM 845 903719 - 903736 + T 77 -8.5 -3.66177 | TTTCAATAAGCTATC GCTTGAT TAAA ATCAAGC TCTTTGCTATTTTTT HP0852 904729 - 903788 - | hypothetical protein HP0853 906327 - 904726 - | ABC transporter, ATP-binding protein (yheS) TERM 846 905258 - 905241 - G 79 -9.1 -3.9398 | opp_overlap 905240 CTAGAATTTTACAAA GCGTGGA TTTA CCCACGC CGTTTGGCCCTATGA TERM 847 906795 - 906771 - g 81 -2.8 -5.62552 | AAAAAAATGAAAAAA CGCCAATGGA TCAGT TCAATCAGCG TGGGAGTGAAAAAGG HP0854 906519 - 907502 + | guanosine 5'-monophosphate oxidoreductase TERM 848 907795 - 907808 + G 76 -3.1 -5.27709 | overlap 907794 TTCCCTAAACTATGG CTAGT ATTG GCTAG TTTGTTTTTTTATGC TERM 849 909049 - 909067 + G 74 -6 -4.32034 | overlap 909051 ATAATGTATGCATCC CCCACATT TAA AATGTGTG TTTTGATGATAATCA TERM 850 909072 - 909084 + G 71 -6.3 -4.27026 | overlap 909071 TAAAATGTGTGTTTT GATGA TAA TCATC TCTTTTTGTTTAAAA HP0855 907648 - 909231 + | alginate O-acetylation protein (algI) TERM 851 909601 - 909614 + G 85 -3.8 -5.59564 | overlap 909596 CCAGTCAATACCGTT GCCA TGGATT TGGC TTTTTTTGAATTTAT HP0856 909241 - 910335 + | hypothetical protein HP0857 910916 - 910338 - | phosphoheptose isomerase HP0858 912294 - 910909 - | ADP-heptose synthase (rfaE) TERM 852 911884 - 911916 + g 100 -6.5 -5.8187 | overlap 911885 911902 GATAACGCCATCTAT TTCTTGGATTTTTTC TGT GAAAAAATCTAAAAG TTTTTTTCTTAAATC TERM 853 911885 - 911915 + g 75 -7.8 -4.07495 | overlap 911884 911902 ATAACGCCATCTATT TCTTGGATTTTTTC TGT GAAAAAATCTAAAA GTTTTTTTCTTAAAT TERM 854 912137 - 912123 - G 85 -2.9 -5.71712 | CCCCACATAAAAAAA CTTTA GCTTT TAAAG AAATGAGGTTATTAG HP0859 913283 - 912291 - | ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD) HP0860 913813 - 913292 - | hypothetical protein HP0861 914543 - 913803 - | hypothetical protein HP0862 915205 - 914534 - | pantothenate kinase TERM 855 914782 - 914799 + g 85 -4.1 -5.61596 | AGGCCTTGAAAGGTT GCTCTAA AATT TTAGCGC TTTTTTTATACGCAT HP0863 916838 - 915210 - | hypothetical protein HP0864 917499 - 916843 - | hypothetical protein dut 917933 - 917496 - | deoxyuridine 5'-triphosphate nucleotidohydrolase greA 918417 - 917923 - | transcription elongation factor GreA TERM 856 918235 - 918255 + g 83 -5.3 -5.27335 | overlap 918238 GCTTAAATCCACGAT CCTCGCTTC AAT GAAGCGTTG TTTTTCTTTAGCGGC TERM 857 918238 - 918252 + g 93 -10 -4.72696 | overlap 918235 TAAATCCACGATCCT CGCTTC AAT GAAGCG TTGTTTTTCTTTAGC lpxB 919540 - 918458 - | lipid-A-disaccharide synthase HP0868 920001 - 919540 - | hypothetical protein hypA 920358 - 920005 - | hydrogenase nickel incorporation protein flgE 922573 - 920417 - | flagellar hook protein FlgE HP0871 923515 - 922781 - | CDP-diacylglycerol pyrophosphatase HP0872 923867 - 924196 + | alkylphosphonate uptake protein (phnA) HP0873 924466 - 924251 - | hypothetical protein HP0874 925426 - 924551 - | hypothetical protein TERM 858 925557 - 925535 - R 87 -8.5 -4.33258 | overlap 925549 ATTTTGAAAGACAAA GCGTTCCTA AAAAA TAAGAACGC TTAAAGAAAAGGGTT TERM 859 925563 - 925580 + r 82 -4.9 -5.39721 | opp_overlap 925563 ATAAGAACGCTTAAA GAAAAGG GTTA CTTTTTC TTTTTTGTGTGGTGC HP0875 927088 - 925571 - | catalase TERM 860 927298 - 927271 - H 85 -8 -4.71463 | opp_overlap 927271 927269 AATGAAAATAAGAAA GATTAAAAACAA AATT TTATTTTTAATC TGGTTTTAATAATAA HP0876 927411 - 929786 + | iron-regulated outer membrane protein (frpB) ruvC 930260 - 929787 - | Holliday junction resolvase HP0878 930391 - 930564 + | hypothetical protein TERM 861 930630 - 930619 - gT 84 -2.2 -5.79588 | CCAAAATGAAAAAAA TCCG GGAA CAGA AATGAAAATCTTCAC HP0879 930515 - 931123 + | hypothetical protein HP0880 932025 - 931603 - | hypothetical protein HP0881 932128 - 932033 - | hypothetical protein ruvA 933369 - 932818 - | Holliday junction DNA helicase motor protein TERM 862 933150 - 933164 + g 70 -2.8 -5.04987 | opp_overlap 933150 933151, overlap 933151 CATTGATTTTTAAAA GCCTTT CAA AAAGGA TTTTTTCGCCCTCTT HP0884 935239 - 933395 - | hypothetical protein TERM 863 933928 - 933908 - G 72 -3.1 -5.05153 | overlap 933904 AGCGTAAAAAATAAA GCGGTTGCC ATT GCCATCCAC CTCATCAATCCAACA TERM 864 934415 - 934445 + g 82 -6.2 -4.96657 | overlap 934419 CATTTTAACCCCTTG TAAGGCTTTGGAGT AAT ACACTAAAGCGTTA TTTTCTTCTCTTTCT TERM 865 935862 - 935849 - g 80 -2.3 -5.63517 | opp_overlap 935849 TTTCTAAAGAAAAAA CGCAT TTAG AAGCG TTGTATTATTTGAGC HP0885 935407 - 936792 + | virulence factor mviN protein (mviN) TERM 866 938087 - 938074 - g 74 -3.7 -5.16038 | ATAGAAGAAAGAAAA CGCGC CAAA GAGCG AAAAGATTTTTTAAA cysS 936793 - 938190 + | cysteinyl-tRNA synthetase TERM 867 939873 - 939863 - g 72 -4.6 -4.81551 | opp_overlap 939863 TACGGATACCAAAAA CGGC ACA GCCA CTTTTAATAACGATA HP0887 938415 - 942287 + | vacuolating cytotoxin TERM 868 942320 - 942302 - T 100 -13.2 -3.54307 | opp_overlap 942302, overlap 942289 AATACCGCTCTTAAA CCCATGCT CAA AGCATGGG TTTGAAATCTTACAA TERM 869 942302 - 942320 + T 100 -13.2 -3.66803 | opp_overlap 942289 942302 AATACCGCTCTTAAA CCCATGCT CAA AGCATGGG TTTGAAATCTTACAA HP0888 943114 - 942347 - | iron(III) dicitrate ABC transporter, ATP-binding protein (fecE) HP0889 944094 - 943114 - | iron(III) dicitrate ABC transporter, permease protein (fecD) HP0890 944857 - 944087 - | hypothetical protein TERM 870 944515 - 944498 - G 73 -5.5 -4.59853 | GTAATGGCCTAAAAA GAGCATG CTCA CACGCCC TGCTATGGAAGAAAG TERM 871 944904 - 944916 + H 79 -4.8 -5.13354 | GCCCCAGTGATAACC GCCA CCTTT TGGC TTTCTTTTTTCTCGC TERM 872 945025 - 945042 + H 74 -5.7 -4.57341 | ATATAGTTCTTGGAA TGTTTTT TACA AAAAACA TTTTTAACACCAATT HP0891 945075 - 945599 + | hypothetical protein HP0892 945963 - 945691 - | hypothetical protein HP0893 946264 - 945977 - | hypothetical protein TERM 873 946105 - 946123 + g 78 -3.8 -5.243 | TTTCGGTTAAGTTTA GCGCTTTA AAT TGGAGTGC TTTTTTAATCCTTTG HP0894 946611 - 946345 - | hypothetical protein TERM 874 946574 - 946587 + g 74 -3.9 -5.09426 | opp_overlap 946568 946564 946565 946574, overlap 946565 AGCAATTTATCAAAA TCTTT TTGA AAAGA TTTTTTAAGATTGAG HP0895 946969 - 946592 - | hypothetical protein TERM 875 947160 - 947176 + r 79 -8.7 -3.88832 | ATTTTTAAAATTATC GCTTGCT TTT GGCAAGC TCTTTTATCATTGGT TERM 876 947228 - 947210 - R 70 -3.8 -5.04265 | overlap 947214 AAAAAATACTAAAAA GGATTTTG CAT CAAACCCC CCCCCAAAAAATAAA TERM 877 947428 - 947405 - R 72 -2.4 -5.46629 | opp_overlap 947408 947409, overlap 947409 AAGAGTTTAAAAAAA GAAATCCCTT AAAA AAGGGAGTTT AAAAACGAAAGGGTT TERM 878 947424 - 947409 - R 91 -7.6 -5.20328 | opp_overlap 947409 947408, overlap 947405 GTTTAAAAAAAGAAA TCCCTT AAAA AAGGGA GTTTAAAAACGAAAG TERM 879 947541 - 947505 - R 79 -2.4 -5.82388 | opp_overlap 947508 947509, overlap 947509 AAAGCTTAAAAAAAA GAAATCTCTTTAAAAA GAGAA TTTAAAAAGAGAGTTC AAAAAAAAACCCCTT TERM 880 947524 - 947509 - R 88 -6.2 -5.33985 | opp_overlap 947509 947508, overlap 947505 CTTAAAAAAAAGAAA TCTCTT TAAA AAGAGA ATTTAAAAAGAGAGT TERM 881 947565 - 947551 - R 100 -6.4 -6.09133 | opp_overlap 947551 947551, overlap 947552 GAGTTCAAAAAAAAA CCCCTT AAA AAGGGA GTTTCACAAAAAGCT TERM 882 947564 - 947552 - R 80 -7.7 -4.23853 | opp_overlap 947551 947551, overlap 947551 AGTTCAAAAAAAAAC CCCTT AAA AAGGG AGTTTCACAAAAAGC TERM 883 947588 - 947578 - R 74 -5.4 -4.84359 | GGAGTTTCACAAAAA GCTT AGT AAGC GAACACATAATTCAA HP0896 949706 - 947580 - | outer membrane protein (omp19) HP0897 950022 - 950648 + | hypothetical protein HP0898 951852 - 950740 - | hydrogenase expression/formation protein (hypD) HP0899 952091 - 951858 - | hydrogenase expression/formation protein (hypC) TERM 884 952102 - 952124 + r 75 -2.7 -5.60993 | CACATTAAAACGAAT GCGTGGA CTGGTAATT TTCACGC TTTTTTTCTAGAAGG HP0900 952819 - 952091 - | hydrogenase expression/formation protein (hypB) HP0901 953053 - 952928 - | hypothetical protein HP0902 953363 - 953064 - | hypothetical protein ackA 954661 - 953461 - | acetate kinase HP0905 956225 - 955554 - | phosphotransacetylase (pta) TERM 885 957320 - 957303 - g 70 -5.5 -4.31485 | TAACGAAAAAAAAAC GCCCCCT TTAA AGGAAGC TTTAGAAATGAACGC HP0906 956485 - 958068 + | hypothetical protein TERM 886 958880 - 958862 - g 70 -8.8 -3.32997 | overlap 958876 TTTTGATAAAGGCAA GCCCATGC TGA GAATGGGC GAAATGGTTTTACCC flgD 958119 - 959024 + | flagellar basal body rod modification protein TERM 887 959535 - 959525 - g 75 -5.4 -4.74453 | GAAGACATTGAAAAA TTGC ATG GCAA CACCCTTTCGCCCTT flgE 959021 - 960838 + | flagellar hook protein FlgE HP0909 960890 - 961495 + | hypothetical protein HP0910 961488 - 962627 + | adenine specific DNA methyltransferase (HINDIIM) TERM 888 963003 - 962990 - g 72 -4.5 -4.8048 | TGTGGACACTAAAAA CGCCA TAGA TGACG ATAAAAAGCCCTACA TERM 889 964089 - 964099 + G 73 -2.4 -5.18561 | CTCAATGGGGCTAAA ACGC TCA GCGA TTTTTTCACTCTTTA HP0911 962631 - 964658 + | rep helicase, single-stranded DNA-dependent ATPase (rep) TERM 890 964738 - 964696 - f 74 -8.7 -3.21938 | gap 1, opp_overlap 964703, overlap 964703 TTAAAACGCCAGCAA CCATAGATTTTAGCTCTAGC TTGT GCTAGAGCCAAAATTT-TAG TATAATGGCGTTGTT TERM 891 964703 - 964732 + F 100 -12.3 -4.371 | opp_overlap 964696 964703 GCCAGCAACCATAGA TTTTAGCTCTAGC TTGT GCTAGAGCCAAAA TTTTAGTATAATGGC TERM 892 964732 - 964703 - f 100 -14.5 -3.02096 | opp_overlap 964703, overlap 964696 GCCAGCAACCATAGA TTTTAGCTCTAGC TTGT GCTAGAGCCAAAA TTTTAGTATAATGGC TERM 893 966041 - 966013 - g 80 -6 -4.7373 | CGAGCTCACTAAAAA CACCATTAGCGG GAGTG CGGTTAATGGTG CTGAGATAAACTCCA HP0912 965177 - 966724 + | outer membrane protein (omp20) TERM 894 968204 - 968192 - g 74 -4.1 -5.03314 | GGTATCTTGAAAAAA GACTT GAA AAGCC ATAACCAGCATTCTA HP0913 966746 - 968335 + | outer membrane protein (omp21) HP0914 970782 - 969238 - | hypothetical protein TERM 895 970338 - 970328 - G 76 -4.6 -5.0538 | overlap 970329 TCGTATCGTAAAAAA GCGG TAT CCAC CACATAAGGCCTTGC HP0915 972716 - 971028 - | iron-regulated outer membrane protein (frpB) TERM 896 972556 - 972526 - G 70 -5.6 -4.43877 | gap 1, opp_overlap 972504 972526 TAAGTTTTAAACAAA CTAGCG-TCGTTT TCAAAC AAACAATCGCTAG GGTTTTTCTCGTTAG HP0916 973465 - 972716 - | iron-regulated outer membrane protein (frpB) TERM 897 972918 - 972906 - G 79 -4.8 -5.01732 | opp_overlap 972906 972913 AAGTTGGTTAAAAAA GTGG CAGCC CCAC TTATGGCGTAGTCTT HP0917 973624 - 973695 + | hypothetical protein TERM 898 973690 - 973707 + T 87 -8.5 -4.15514 | TTTCAAGAGATTATC GCTTGAT TAAA ATCAAGC TCTTTTATTTATCTT HP0918 974156 - 973725 - | hypothetical protein carB 977418 - 974161 - | carbamoyl phosphate synthase large subunit TERM 899 974750 - 974761 + g 88 -3 -5.9873 | opp_overlap 974750 TAAACGCCTTTAGAA TATC CAAC GATA TTTTTTTTATCATAA TERM 900 975400 - 975382 - G 77 -6 -4.57341 | opp_overlap 975382 975380 975384, overlap 975384 AAGCTCTTTTAAAAA GAGGGAAA ATT TTTCCCTG TCTTCTGCAATATCA TERM 901 975398 - 975384 - G 77 -8.6 -3.90048 | opp_overlap 975382 975380 975384, overlap 975382 GCTCTTTTAAAAAGA GGGAAA ATT TTTCCC TGTCTTCTGCAATAT TERM 902 975974 - 975987 + g 74 -3.9 -5.08169 | opp_overlap 975964 CTAAAGCCTAAATTT TTAAG CCCT CTTAA TTTTTTAGCGTCTGT HP0920 978209 - 977517 - | hypothetical protein TERM 903 978015 - 978000 - G 82 -3.9 -5.40004 | CATCAAACCAAAAAA CGCCG CAATTT CAGCG ATAAAAAACACCCAT HP0921 978353 - 979351 + | glyceraldehyde-3-phosphate dehydrogenase (gap) TERM 904 982299 - 982309 + G 73 -6.8 -4.21812 | GGTTTATAATTTGCA GGCT AAT AGCC TTATTTTCAATAACA TERM 905 983143 - 983130 - g 76 -6.7 -4.44277 | CATGAAAATCCAAAA CGCTA CCTA TAGCG ACAACAATAACATCC TERM 906 986618 - 986606 - g 70 -7.7 -3.71649 | opp_overlap 986606 TTTTTAAACCTCAAA TAGGC TTA GCCTA TTATTACATTGGTTT TERM 907 986606 - 986618 + G 70 -7.7 -3.762 | opp_overlap 986606 TTTTTAAACCTCAAA TAGGC TTA GCCTA TTATTACATTGGTTT HP0922 979432 - 987021 + | toxin-like outer membrane protein HP0923 987073 - 988182 + | outer membrane protein (omp22) HP0924 988448 - 988242 - | 4-oxalocrotonate tautomerase (dmpI) TERM 908 988574 - 988551 - H 71 -5.4 -4.61482 | gap 1, opp_overlap 988556, overlap 988548 988556 CCTTTTAAAAAACAA TAAAAGCC-CT TTT AGTGGCTTTCA AGTCAAGTTAAGTTT TERM 909 988569 - 988556 - H 71 -3.1 -5.22104 | gap 1, opp_overlap 988556, overlap 988548 988551 TAAAAAACAATAAAA GCC-CT TTT AGTGGC TTTCAAGTCAAGTTA TERM 910 988679 - 988665 - g 78 -4.2 -5.24531 | overlap 988646 988667 ATTGTTTAGAAAAAA TCCCCA ATG TGGGTA AAAAGTCCGCCTTTA recR 988604 - 989185 + | recombination protein RecR truD 989182 - 990327 + | tRNA pseudouridine synthase D HP0927 990266 - 991246 + | heat shock protein HtpX TERM 911 991458 - 991476 + G 76 -4.5 -5.02476 | overlap 991460 AATTTTACTCCACTT GCGAGCA CCATT TGCTCCC TTTTTTGGGGAATAT folE 991247 - 991789 + | GTP cyclohydrolase I TERM 912 992535 - 992523 - g 73 -5.5 -4.51224 | opp_overlap 992523 AAGATGAAGAAGAAA GCGGT AAA ACCAC TCATTTAGACAGCGC HP0929 991805 - 992716 + | geranyltranstransferase (ispA) TERM 913 993320 - 993307 - g 72 -4.5 -4.72201 | CTGTATAAAAAAGAA GTGCA TAAA CGCAC AGACCCCAAAAATGA surE 992713 - 993516 + | stationary phase survival protein SurE HP0931 993513 - 993953 + | hypothetical protein HP0932 993869 - 994171 + | hypothetical protein TERM 914 994729 - 994717 - g 77 -6.3 -4.63486 | overlap 994720 ACTTTTTCAATAAAA TCATC AGC GATGA AAAACAATGCTTTTT HP0933 994173 - 994775 + | hypothetical protein TERM 915 995297 - 995287 - g 71 -6.8 -3.97051 | AAATATCTTAAATAA CGCT AAA AGCG CGCATTTTAAATTTG HP0934 994778 - 995533 + | hypothetical protein TERM 916 995839 - 995829 - g 73 -5.4 -4.62069 | GGGCTAGGTCAAAAA CTCT ATG AGAG CGTGGAGAAATACGC TERM 917 996002 - 996018 + G 72 -4.5 -4.73864 | TTTGATTTTCCCCAC TCTTTTT ATG GAAAAGA TTTTGTCTTGATTGG HP0935 995544 - 996029 + | hypothetical protein HP0936 997701 - 996532 - | proline/betaine transporter (proP) HP0937 999117 - 998323 - | hypothetical protein HP0938 999544 - 999197 - | hypothetical protein HP0939 1000320 - 999607 - | amino acid ABC transporter, permease protein (yckJ) HP0940 1001074 - 1000304 - | amino acid ABC transporter, periplasmic binding protein (yckK) HP0941 1002275 - 1001142 - | alanine racemase, biosynthetic (alr) TERM 918 1002251 - 1002235 - G 72 -8.7 -3.56836 | opp_overlap 1002238, overlap 1002238 AAATTATGCCTTAAA GAAGCGG TAT CCACTTC TACAAAACTCGCCCT HP0942 1003634 - 1002282 - | D-alanine glycine permease (dagA) HP0943 1004907 - 1003675 - | D-amino acid dehydrogenase (dadA) TERM 919 1004223 - 1004233 + g 76 -6.8 -4.42748 | TGTGCGTGATAACGC CCTC AAT GAGG TTATTTTTAAACTCA HP0944 1005306 - 1004929 - | hypothetical protein TERM 920 1005737 - 1005721 - R 82 -10.9 -2.62983 | CTCAGTGGTAGAGCA CGACCTT GCC AAGGTCG GGGCCGCGGGTTCGA HP0945 1006082 - 1005786 - | hypothetical protein HP0946 1006665 - 1008155 + | hypothetical protein TERM 921 1008283 - 1008266 - f 100 -7.1 -5.32565 | CAATCAATTAAAAAA GGTTATT CAAA AATAACC ATACAATTATAAAAA TERM 922 1008329 - 1008351 + F 79 -5.1 -5.1675 | overlap 1008327 AAAGAGTAACGCTTT TTAAAAAAA TACAT TTTTTTTAA TTTTTTAATCAATCA HP0947 1008470 - 1008832 + | hypothetical protein TERM 923 1008844 - 1008861 + T 77 -8.5 -3.60884 | TTAAAGCGTTATTTG GGGTATT CTTT AATACCC TTATCGTCTTTTAAA HP0948 1010212 - 1009199 - | hypothetical protein HP0949 1010674 - 1010222 - | SPOUT methyltransferase superfamily protein TERM 924 1010309 - 1010287 - G 80 -10 -3.7511 | opp_overlap 1010286 GCTCGCATAAGACAA TTTTAGCCAC TTC ATGGCTAAAA GTCATCTCGCTCAAA TERM 925 1010499 - 1010511 + g 72 -3.4 -5.01732 | opp_overlap 1010490 1010489 1010499, overlap 1010490 AAATACGGCTCAAAA GCTA GAGAG TAGC TTTTTTGAGCCAGTT HP0950 1011557 - 1010688 - | acetyl-CoA carboxylase subunit beta TERM 926 1011232 - 1011244 + g 78 -2.6 -5.38348 | CTGATCACTGAGCTT GGGC GGTTA GTCC TTTTTTCGTATTTTT HP0951 1011635 - 1012252 + | hypothetical protein HP0952 1012263 - 1012919 + | hypothetical protein HP0953 1013488 - 1012922 - | hypothetical protein HP0954 1014185 - 1013553 - | oxygen-insensitive NAD(P)H nitroreductase HP0955 1015036 - 1014182 - | prolipoprotein diacylglyceryl transferase HP0956 1015774 - 1015046 - | hypothetical protein TERM 927 1015552 - 1015533 - G 70 -2.9 -5.03145 | gap 1, opp_overlap 1015536 1015548, overlap 1015536 CAACCTTTGAAAAAA GAG-GCTA GATCA TAGCTCTC TATAAAAGGGGGTTT HP0957 1016967 - 1015786 - | 3-deoxy-D-manno-octulosonic-acid transferase HP0958 1017732 - 1016968 - | hypothetical protein TERM 928 1017066 - 1017050 - G 73 -7.9 -3.80877 | overlap 1017048 1017051 TCAGCGTATAAAATA CGCCCGC AAT ACGGGCA AGTGATCATATCCCC HP0959 1018473 - 1017742 - | hypothetical protein glyQ 1019371 - 1018460 - | glycyl-tRNA synthetase subunit alpha TERM 929 1018505 - 1018491 - G 72 -8.6 -3.53444 | opp_overlap 1018489 1018491 TCAGCCTTTGTTAAA GCGTTT TTT AAACGC TCTTCCCTCTCTTCT gpsA 1020323 - 1019385 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase HP0962 1020916 - 1020455 - | acyl carrier protein (acpP) HP0963 1022252 - 1020909 - | hypothetical protein TERM 930 1021934 - 1021948 + g 79 -5.6 -5.00616 | CGCTAAACCCTCCCC CCACCG CAA CGATGG TTTTTTGGAACAAAC HP0964 1023340 - 1022249 - | hypothetical protein TERM 931 1022290 - 1022305 + gr 75 -5.4 -4.68655 | TTTGTGCATCTAATT GAGCGA TGGA TTGCTC TTTGTTTTGAACTTG HP0965 1024581 - 1023250 - | hypothetical protein TERM 932 1023358 - 1023370 + gr 82 -7.7 -4.64598 | overlap 1023352 1023369 TTCTTTTTTGCTTTC CCAAG AAG CTTGG TTTTTGAAATCCTTA TERM 933 1024074 - 1024088 + gr 78 -4.2 -5.26119 | AAACCCTCTCTTTGG GTGCTG CTT CAGTGC TTTTGTTTTTGCCAA TERM 934 1024145 - 1024161 + gr 85 -5.9 -5.28983 | TCTTTAGCCCTATTT GAAAGAC TCT GTTTTTC TTTTTGTCTTTTGAC TERM 935 1024399 - 1024364 - GR 74 -6 -4.32046 | opp_overlap 1024374, overlap 1024374 CCCTCAAAAATCAAA GCGTTTAGAAGCGAGC TTTT GCCCGCTTTCACGCGC CCGATGATGCCGACT TERM 936 1024389 - 1024374 - GR 71 -8.2 -3.32294 | opp_overlap 1024374, overlap 1024364 TCAAAGCGTTTAGAA GCGAGC TTTT GCCCGC TTTCACGCGCCCGAT TERM 937 1024533 - 1024553 + gr 72 -3.3 -5.10497 | AGCCTTGTTCTTGTA GCGTTTT TTCAATT AAAGCGC TTTTTTGAATGAGTT HP0966 1026227 - 1024578 - | hypothetical protein TERM 938 1024655 - 1024673 + g 80 -2.4 -5.67529 | overlap 1024657 1024658 AGATTTGTTTTTGAT CTTCTAAA TCG TTTAGGTG TTTTTCTTTTTCCTT TERM 939 1025008 - 1024991 - G 79 -4.9 -5.0133 | gap 1, opp_overlap 1024994, overlap 1024994 GATTCTTGGAAAAAA TC-ACGCT TAA AGCGTTGA TCCCTAATTCAATCC TERM 940 1025543 - 1025568 + g 70 -9.1 -3.13299 | opp_overlap 1025548, overlap 1025542 1025548 GGATGAGGTGCGTTG TCAAATCAAGG TGAT CCTGGATTTGA TCTTGAATGTAGTGA HP0967 1026735 - 1026448 - | virulence associated protein D (vapD) HP0969 1030164 - 1027102 - | cation efflux system protein (czcA) HP0970 1031240 - 1030161 - | nickel-cobalt-cadmium resistance protein (nccB) TERM 941 1031028 - 1031044 + g 80 -8 -4.3467 | opp_overlap 1031023 1031028 CGCATCAAAACTCAA GCTCTG CACCA CAGAGC TTTTACTATCAAAAT TERM 942 1031044 - 1031028 - G 70 -8.7 -3.39521 | opp_overlap 1031028, overlap 1031023 CGCATCAAAACTCAA GCTCTGC ACC ACAGAGC TTTTACTATCAAAAT TERM 943 1031118 - 1031139 + g 100 -4.5 -5.88565 | gap 1, opp_overlap 1031117 ATCTAATTTAACCAC CTT-TAACCC CAT GGGTTGCAAG TTTTTTTCTTCTAAA HP0971 1032478 - 1031237 - | hypothetical protein TERM 944 1031395 - 1031380 - G 72 -4.6 -4.77986 | opp_overlap 1031380 TCAAATATTCAAAAA GCCCGA TTTT TTGGGC TTCATAAGCGATGCG TERM 945 1032136 - 1032124 - G 77 -6.2 -4.51765 | CATAAGTCAAATAAA GGCG TTTAG CGCC AATAAAAGCGAGATT glyS 1034633 - 1032528 - | glycyl-tRNA synthetase subunit beta TERM 946 1032728 - 1032712 - G 71 -6.5 -4.17089 | TCCAAACTCTCAAAA GCGTTCA TTT TGATCGC ATTAAACGCTTCAAA TERM 947 1033166 - 1033153 - G 79 -6.7 -4.54727 | overlap 1033148 CGCCTTAAAGCAAAA GGATC TTTA GATCC GCTAGGGATTTTACC HP0973 1034745 - 1035806 + | hypothetical protein TERM 948 1036314 - 1036300 - g 74 -5 -4.68908 | CTTATTTAAAACAAA TGCAAA ATA TCTGCA ATGAAAGCATTCAAA HP0974 1035819 - 1037294 + | phosphoglyceromutase gatC 1037309 - 1037590 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 949 1037613 - 1037629 + T 85 -8.1 -4.62069 | opp_overlap 1037625 1037626 TGAATAGGTTTCATA TCAAGTT AAA AACTTGA TTTTTGAAATCAAAC TERM 950 1037643 - 1037625 - T 74 -5.4 -4.76892 | opp_overlap 1037613, overlap 1037626 ATATCAAGTTAAAAA CTTGATTT TTG AAATCAAA CAGACAGAAAAAAGC TERM 951 1037663 - 1037680 + T 76 -5.6 -4.99972 | CAGAAAAAAGCTATC GCTTGA TCCAAT TCAAGC TTTTTACTATTTTAT HP0976 1039020 - 1037710 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 952 1038006 - 1038022 + g 73 -2.3 -5.26119 | ACCCGCTTAAAGCCT TGTTCTT TTC AATAACA TTTTCTTTTTCAAAA HP0977 1039149 - 1040612 + | hypothetical protein HP0978 1040628 - 1042106 + | cell division protein (ftsA) protein TERM 953 1043008 - 1042994 - g 73 -10 -2.77344 | opp_overlap 1042985, overlap 1042993 CCACTGGCGAAGAAT CCGCTA AAT TAGCGG TGCAAAATGCGATCC HP0979 1042237 - 1043394 + | cell division protein FtsZ TERM 954 1043386 - 1043406 + F 72 -4.8 -4.87273 | gap 1, opp_overlap 1043385 ACCATGAGAATCCAG CAAGA-CTG ATTG CAGATCTTG TTTTTCTCCCCTATT TERM 955 1044195 - 1044172 - f 100 -5.9 -6.17268 | TTATAACAAAAAAAA GGGGAATGG TTTTAC CCACGCCCC ACGCTCTTTTTAGGT HP0980 1044552 - 1044854 + | hypothetical protein HP0981 1044772 - 1045137 + | exonuclease VII-like protein (xseA) TERM 956 1045779 - 1045764 - g 88 -9 -4.58685 | opp_overlap 1045766 AAATGGTTTGAAAAA CACCCA TCAG TGGGTG TTAAAGTTGGTCGGC HP0982 1045509 - 1046204 + | hypothetical protein TERM 957 1046823 - 1046837 + F 70 -6.4 -4.26622 | overlap 1046833 AGAAAATATCCATGC GGTTGT GGG GCAACC TTTTGGGTGTGATTT TERM 958 1047356 - 1047390 + G 71 -7.2 -3.9644 | opp_overlap 1047357, overlap 1047357 1047359 GGCGTTGGCTTTAAA AGATTATCTTTCAAGC ATT GCTGGAGGGATAATCC TTATTATCTTGCACC TERM 959 1047357 - 1047389 + G 78 -10.7 -2.97382 | opp_overlap 1047357, overlap 1047356 1047359 GCGTTGGCTTTAAAA GATTATCTTTCAAGC ATT GCTGGAGGGATAATC CTTATTATCTTGCAC TERM 960 1047810 - 1047800 - g 72 -4.6 -4.77157 | TGAACGCATCAAAAA CGCC CTA GACG CTAACCACATTGAAA HP0983 1047054 - 1047878 + | hypothetical protein HP0984 1047958 - 1048065 + | hypothetical protein TERM 961 1048129 - 1048108 - T 100 -11.6 -4.27467 | CAAGAGCAAGAGAAA CGCATGGC ATAAGA GCCATGCG CTTGGCAGTGAAACA HP0985 1048411 - 1048088 - | hypothetical protein HP0986 1049427 - 1048714 - | hypothetical protein HP0987 1050812 - 1051045 + | hypothetical protein HP0988 1051480 - 1051052 - | IS605 transposase (tnpA) TERM 962 1051355 - 1051379 + g 76 -2.3 -5.51046 | gap 1, opp_overlap 1051355 AACAGACTTAATAAA GTTGTT-CAA ATCCCC TTGCAACAAC TTTTTTCTGTATTTA HP0989 1051550 - 1052833 + | IS605 transposase (tnpB) TERM 963 1052842 - 1052819 - f 88 -6.6 -5.20534 | opp_overlap 1052817 1052820 1052825, overlap 1052820 ATGAAGCAAGAAAAA GCCCAATCGC TTTA GCGGTTGGGT AATTCACTCCAATCT TERM 964 1052820 - 1052841 + F 89 -12.3 -2.75382 | opp_overlap 1052820 1052819, overlap 1052817 1052825 TGAAGCAAGAAAAAG CCCAATCGC TTTA GCGGTTGGG TAATTCACTCCAATC TERM 965 1052841 - 1052820 - f 86 -10.1 -3.70694 | opp_overlap 1052817 1052820 1052825, overlap 1052819 TGAAGCAAGAAAAAG CCCAATCGC TTTA GCGGTTGGG TAATTCACTCCAATC HP0990 1052927 - 1053595 + | hypothetical protein HP0991 1054229 - 1053600 - | hypothetical protein HP0992 1054615 - 1054376 - | hypothetical protein HP0993 1054815 - 1055066 + | hypothetical protein HP0994 1055038 - 1055841 + | hypothetical protein TERM 966 1056088 - 1056059 - T 86 -7.4 -4.75219 | opp_overlap 1056082, overlap 1056082 TAATTAGCAATAAAA CATTAAATAGTT AATTAA AACTATCTAATG CTAGATTATTTATCT HP0995 1057225 - 1056158 - | integrase/recombinase (xerD) TERM 967 1056776 - 1056791 + g 73 -5.4 -4.59773 | overlap 1056774 TAAGCTTTCTTTGGT CTTAGC AAAG GCTAGG TTTTTAAGCGTAAAA TERM 968 1057518 - 1057540 + r 77 -10 -2.7386 | overlap 1057517 1057515 GAAAGTAAGCTTTAA GCGCTTTTTA AGG TAAAAAGTGC GTGTTTATGGGTATT TERM 969 1057583 - 1057566 - R 71 -5.5 -4.62984 | opp_overlap 1057567, overlap 1057567 GTATTAGATATAAAA GCGGAAC TTAA GTTCCGT ATAGTTATAAAAATA TERM 970 1057582 - 1057567 - R 77 -9 -3.37067 | opp_overlap 1057567, overlap 1057566 TATTAGATATAAAAG CGGAAC TTAA GTTCCG TATAGTTATAAAAAT TERM 971 1057567 - 1057582 + r 73 -9 -2.96452 | opp_overlap 1057566 1057567 TATTAGATATAAAAG CGGAAC TTAA GTTCCG TATAGTTATAAAAAT TERM 972 1057629 - 1057602 - R 100 -11.4 -4.13816 | opp_overlap 1057608, overlap 1057597 1057603 GTTATAAAAATATAA GGGAAAGAAAGG TTTA CCTTTCTTTCCT AACCTATTGAGTAAA TERM 973 1057628 - 1057603 - R 100 -14.9 -3.07205 | opp_overlap 1057608, overlap 1057602 1057597 TTATAAAAATATAAG GGAAAGAAAGG TTTA CCTTTCTTTCC TAACCTATTGAGTAA TERM 974 1057608 - 1057623 + r 73 -7.6 -3.76379 | opp_overlap 1057603 1057602 1057597 AAAATATAAGGGAAA GAAAGG TTTA CCTTTC TTTCCTAACCTATTG TERM 975 1057773 - 1057760 - R 70 -3.9 -5.11718 | ATCAAAAAAAAAGAA CTTTT GATT AAAAG AGACAAACTGACTGA TERM 976 1057899 - 1057887 - R 79 -3.4 -5.70761 | AAAATAAAAGAAAAA TAGG AATTA CCTA TCAATGACATGTTAG TERM 977 1058179 - 1058190 + r 74 -2.2 -5.63236 | opp_overlap 1058168 TTAAGCTCTACAAGG CGTT TTAA AGCG TTTTTGTTTTTAGGT TERM 978 1058333 - 1058306 - R 80 -7.8 -4.20868 | opp_overlap 1058306 1058314, overlap 1058313 TTGTGAAAAGAACAA GAATAAACCCCT TTCA AAGGGTATATTC TTTATTAAGAACATT TERM 979 1058314 - 1058326 + r 71 -7.7 -3.41979 | opp_overlap 1058313 1058306, overlap 1058306 AGAACAAGAATAAAC CCCTT TCA AAGGG TATATTCTTTATTAA HP0996 1060175 - 1058373 - | hypothetical protein TERM 980 1058482 - 1058495 + g 90 -5.3 -5.69262 | overlap 1058467 TTAGCTTGTTGTTTA GCTAA TTCT TTAGC TTTTTCTTTTTCTAG TERM 981 1060315 - 1060338 + r 88 -6.6 -5.20534 | opp_overlap 1060313 1060316 1060321, overlap 1060316 AGTTAGGAGTGAATT ACCCAACCGC TAAA GCGATTGGGC TTTTTCTTGCTTCAT TERM 982 1060337 - 1060316 - R 89 -12.3 -2.76263 | opp_overlap 1060316 1060315, overlap 1060313 1060321 GTTAGGAGTGAATTA CCCAACCGC TAAA GCGATTGGG CTTTTTCTTGCTTCA TERM 983 1060316 - 1060337 + r 86 -10.1 -3.70694 | opp_overlap 1060313 1060316 1060321, overlap 1060315 GTTAGGAGTGAATTA CCCAACCGC TAAA GCGATTGGG CTTTTTCTTGCTTCA HP0997 1061607 - 1060324 - | IS605 transposase (tnpB) TERM 984 1061802 - 1061778 - g 76 -2.3 -5.51046 | gap 1, opp_overlap 1061778 TAAATACAGAAAAAA GTTGTTGCAA GGGGAT TTG-AACAAC TTTATTAAGTCTGTT HP0998 1061677 - 1062105 + | IS605 transposase (tnpA) HP0999 1062236 - 1062421 + | hypothetical protein HP1000 1062687 - 1063343 + | PARA protein TERM 985 1063462 - 1063478 + G 77 -9.5 -3.57144 | opp_overlap 1063457 AAAAAGACAGGCTGA GCGATTT AGA AAATCGC TTTGAGAATGCCAAC TERM 986 1063616 - 1063644 + G 83 -3.2 -5.64421 | opp_overlap 1063616 1063621 AGCGTTCAGAGAAAA TAAAAGCGTGTT TGTTC AAGACGCTATTA TTTTTTATTTAGAAT TERM 987 1063639 - 1063621 - g 76 -3.1 -5.23292 | opp_overlap 1063616, overlap 1063616 TCAGAGAAAATAAAA GCGTGTT TGTTC AAGACGC TATTATTTTTTATTT HP1001 1063428 - 1063712 + | hypothetical protein TERM 988 1064466 - 1064449 - g 72 -3.3 -5.04325 | opp_overlap 1064402 1064449 1064451 GCTAAATTAGAAAAA GCCGCTC TTAT GAATGGC GTTTATATAAGCCCT TERM 989 1064608 - 1064571 - g 73 -5.7 -4.61566 | CCCTAAATTAGAAAA GCAAAGCCCTTTTAT TGATGCGG ATAAAATGGCTATGC AATCTGCGGGGTTAT HP1002 1063756 - 1064940 + | hypothetical protein HP1003 1066077 - 1064965 - | hypothetical protein TERM 990 1065499 - 1065487 - G 70 -2.7 -5.03715 | overlap 1065488 ACTATCTTTAAAAAA CTTAG CCA CTAAA AACATATTGCCTTTA TERM 991 1065783 - 1065801 + g 76 -3.2 -5.20216 | overlap 1065784 CTAAATCTATAATCT TTTTTTGT GTG GCAAAAAG TTTTTTAATGGTATA HP1004 1066874 - 1066053 - | hypothetical protein HP1005 1067156 - 1067470 + | hypothetical protein HP1006 1068554 - 1068021 - | conjugal transfer protein (traG) TERM 992 1068482 - 1068472 - G 79 -3.2 -5.45652 | ATTTCTAATAAAAAA GGCA ATT TACC AAAACGCACAAATTC TERM 993 1068573 - 1068554 - H 79 -10 -2.94144 | opp_overlap 1068553 1068554, overlap 1068566 CTTTCAGTGAAACCA CCCCTTGC TAAA GCAAGGAG CTTCCTAACTAAAGC HP1008 1069967 - 1070383 + | IS200 insertion sequence from SARA17 TERM 994 1070479 - 1070498 + T 90 -9.2 -4.60487 | opp_overlap 1070470 GCTAAACGCTTACAT CTCCGCCC TAAA GGACGGAG TTTTTCGCGCTAGTG HP1009 1071068 - 1070508 - | site-specific recombinase TERM 995 1071942 - 1071907 - H 74 -9 -3.16055 | opp_overlap 1071908 1071909, overlap 1071884 1071909 CAAATCCGCTAGTAA GATTTGACCCTAGCGC TCTT GCGCTAGAGCCAAAAT TTTAGTATAATGGCG TERM 996 1071908 - 1071941 + H 85 -8.1 -4.371 | opp_overlap 1071884 1071907 1071909, overlap 1071909 AAATCCGCTAGTAAG ATTTGACCCTAGCGC TCTT GCGCTAGAGCCAAAA TTTTAGTATAATGGC TERM 997 1071940 - 1071909 - H 100 -16 -3.13899 | opp_overlap 1071909 1071908, overlap 1071884 1071907 AATCCGCTAGTAAGA TTTGACCCTAGCGC TCTT GCGCTAGAGCCAAA ATTTTAGTATAATGG TERM 998 1071909 - 1071940 + H 88 -11.6 -3.21778 | opp_overlap 1071884 1071907 1071909, overlap 1071908 AATCCGCTAGTAAGA TTTGACCCTAGCGC TCTT GCGCTAGAGCCAAA ATTTTAGTATAATGG TERM 999 1072151 - 1072132 - H 79 -5 -5.1848 | opp_overlap 1072132, overlap 1072123 AATCAACCCAAAAAA CGCTAAAA AAAT TTTAAGCG ATCTTTTAGGGTTAA HP1010 1072429 - 1074456 + | polyphosphate kinase TERM 1000 1074460 - 1074439 - f 72 -5.9 -4.41633 | opp_overlap 1074440, overlap 1074436 1074440 TATTTTGAAAAACAA GCCCTTAAA ACCT TTTAAGGGT TATCGTTCAAATCAT TERM 1001 1074440 - 1074459 + F 80 -9.4 -3.51825 | opp_overlap 1074439 1074436 1074440 ATTTTGAAAAACAAG CCCTTAAA ACCT TTTAAGGG TTATCGTTCAAATCA TERM 1002 1074459 - 1074440 - f 78 -9.4 -3.24256 | opp_overlap 1074440, overlap 1074439 1074436 ATTTTGAAAAACAAG CCCTTAAA ACCT TTTAAGGG TTATCGTTCAAATCA HP1011 1074493 - 1075548 + | dihydroorotate dehydrogenase 2 TERM 1003 1075776 - 1075763 - g 70 -8.1 -3.65353 | CGAAACCATGGGAAA GAGCG GGAT CGCTC ACATGTTAGAGCATT TERM 1004 1076099 - 1076116 + G 70 -5.5 -4.44245 | TGTCTATCACCCCTA CCATTGG ACGC CCATTGG TTTTATGGATGATAT HP1012 1075545 - 1076879 + | protease (pqqE) dapA 1076894 - 1077796 + | dihydrodipicolinate synthase TERM 1005 1077937 - 1077921 - g 75 -3 -5.20333 | CACTTACAATAAAAA TGTTGA AGAAG CCAACA AAATCATAGAAGATG TERM 1006 1078487 - 1078502 + G 78 -4 -5.26316 | gap 1, overlap 1078489 GCAATCCTAACGATC TA-GCCG GAG CGGCTTA TTTTTTATGCGATGA TERM 1007 1078489 - 1078499 + G 84 -8.2 -4.72201 | overlap 1078487 AATCCTAACGATCTA GCCG GAG CGGC TTATTTTTTATGCGA HP1014 1077793 - 1078581 + | 7-alpha-hydroxysteroid dehydrogenase HP1015 1078693 - 1079199 + | hypothetical protein HP1016 1079133 - 1079735 + | phosphatidylglycerophosphate synthase (pgsA) TERM 1008 1079877 - 1079899 + G 76 -3.6 -5.24416 | TTTTCAATATTCAAT TAAAAAAAAA TCA TTTTATTTTA TTTTTGTTATAATTC TERM 1009 1080418 - 1080432 + G 78 -4.2 -5.28942 | overlap 1080419 TTTTCGGTTAAAATT TTTGCC GAG GGCGAG TTTTTCTTTAGCCTG TERM 1010 1080594 - 1080613 + G 70 -3.6 -5.00138 | gap 1, overlap 1080594 1080598 GAGCGCAGCGGTTTT TAGC-GCGA TGC TCGCTGTTA TTTTTGCTTTCACTG HP1017 1079833 - 1081392 + | amino acid permease (rocE) HP1018 1081440 - 1081586 + | hypothetical protein TERM 1011 1082567 - 1082557 - gf 82 -4 -5.4756 | AACCCTAACAAAAAA GAAA CCA TTTC TGCTCAAAACGGCGC HP1019 1081537 - 1082868 + | serine protease (htrA) TERM 1012 1084076 - 1084091 + G 72 -9 -3.28791 | GGCTGTTAGTCCAAG CGCATG TGAG CATGCG TTATAAACAAAAACT ispDF 1082890 - 1084110 + | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein HP1021 1084132 - 1085028 + | response regulator TERM 1013 1085103 - 1085075 - f 86 -9.7 -3.96148 | GCGTTTGATCATAAA TTGCAAGAATGCC AAA AGCATTTTTGCAA TCAAAAGAGCTAAAA TERM 1014 1085780 - 1085798 + G 84 -2.4 -5.71638 | overlap 1085785 ACGCTTTTTTTAATG TGAGTC AAAAAGA GGCTCA TTTTTTTGCTTATTA TERM 1015 1086060 - 1086071 + G 70 -3 -5.08824 | ACTATGGGAACCTGA GTTT AAAA AAAC TTTTTTCCCTAAAAA HP1022 1085284 - 1086120 + | hypothetical protein HP1023 1087465 - 1086215 - | hypothetical protein TERM 1016 1087319 - 1087300 - G 72 -10 -2.74248 | opp_overlap 1087300, overlap 1087299 CAAGACGCGCTAAAG CCCCCACA TAGC TGTGAGGG TTTTTTTGCGCCCCT TERM 1017 1087300 - 1087319 + g 93 -7.8 -5.40474 | opp_overlap 1087300 1087299 CAAGACGCGCTAAAG CCCCCACA TAGC TGTGAGGG TTTTTTTGCGCCCCT TERM 1018 1087922 - 1087950 + G 74 -6.1 -4.37886 | overlap 1087924 ATATTTTAAGCTCTA TTTTTGGGAAAGG AGG CTTTTCGCAAAGA TTTTCTCAAAACTCG HP1024 1087633 - 1088499 + | co-chaperone-curved DNA binding protein A (CbpA) HP1025 1088509 - 1088880 + | putative heat shock protein (hspR) TERM 1019 1088927 - 1088908 - g 74 -5 -4.81249 | overlap 1088900 TTTTAAACCCAAAAA GCCTAGAA GATT TTTTAGGC CAAGAGCATTTAGTA TERM 1020 1089396 - 1089382 - g 74 -4.2 -5.04249 | TGCTCAAAAAACAAA TAGAGC CTG GCGCTA AAACCTATCTTTTAA TERM 1021 1089658 - 1089675 + G 82 -7.7 -4.56597 | opp_overlap 1089658 AAAACCCGGAATTTA TCGCCAG AAGG CTGGTGA TTTTTGCGAGCGAAG HP1026 1088877 - 1090052 + | recombination factor protein RarA HP1027 1090212 - 1090664 + | ferric uptake regulation protein (fur) HP1028 1091181 - 1090684 - | hypothetical protein HP1029 1091714 - 1091178 - | hypothetical protein HP1030 1092606 - 1091743 - | flagellar motor switch protein FliY fliM 1093674 - 1092610 - | flagellar motor switch protein FliM fliA 1094434 - 1093667 - | flagellar biosynthesis sigma factor TERM 1022 1093947 - 1093963 + g 85 -8.7 -4.43669 | AACGCATAAATATCT GAAGCCG TTT TGGCTTC TTTAATTTTTTCAAT HP1034 1095617 - 1094733 - | ATP-binding protein (ylxH) HP1033 1094443 - 1094838 + | hypothetical protein flhF 1096993 - 1095614 - | flagellar biosynthesis regulator FlhF HP1036 1097478 - 1096987 - | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (folK) TERM 1023 1097445 - 1097420 - G 72 -4.7 -4.83169 | overlap 1097424 ACCCTGTTAGAAAAA TCAAGCCTTTT TTTA AAAAGGCTAGG GAAAAAGCGGCTAGT TERM 1024 1097441 - 1097424 - G 77 -8.5 -3.88001 | overlap 1097420 TGTTAGAAAAATCAA GCCTTTT TTTA AAAAGGC TAGGGAAAAAGCGGC HP1037 1098548 - 1097475 - | hypothetical protein TERM 1025 1097559 - 1097538 - G 76 -4.3 -5.0538 | overlap 1097539 GCGCACCCCAAAAAA CCCAGGGAT ATAA ATCCCAGGC TCTACAGAAAACACC TERM 1026 1097558 - 1097539 - G 70 -7.8 -3.62746 | overlap 1097538 CGCACCCCAAAAAAC CCAGGGAT ATAA ATCCCAGG CTCTACAGAAAACAC HP1038 1099065 - 1098562 - | 3-dehydroquinate dehydratase HP1039 1100483 - 1099194 - | hypothetical protein TERM 1027 1099850 - 1099840 - G 84 -6.8 -4.96523 | AAAGTAATAACAAAA GCGA TTG TCGC GCTCCTTGTGGCGCT TERM 1028 1099905 - 1099919 + g 79 -5.8 -4.93365 | AAAAACAGAAAGCGT GAAAAA AAG TTTTTC TTTTTGATTGTGCGA rpsO 1100786 - 1100514 - | 30S ribosomal protein S15 TERM 1029 1101021 - 1101041 + G 77 -10.5 -3.42574 | overlap 1101011 CCCTTGTGGTCTTTG TGATCGCTA TTT TGGCGATCA TTATCGTGCCGTTAC flhA 1100927 - 1103128 + | flagellar biosynthesis protein FlhA TERM 1030 1103211 - 1103224 + G 74 -3.9 -5.04385 | GCTATGCATGCCAGC TTGTT TCAA AACAA TTTTTTAAAAATATC HP1042 1103156 - 1104202 + | hypothetical protein TERM 1031 1104192 - 1104177 - T 76 -6.2 -4.61162 | ATATTAAAGAACAAA TTGAAG AAAT CTTCAA CAACGCTTAAAACTA TERM 1032 1104415 - 1104437 + T 75 -4.8 -5.08878 | overlap 1104416 ATACTAAAATTTTAG TGCAAGCTAG GGT TTAGCTAGCG TTTTCTTTGTGTATT HP1043 1105416 - 1104745 - | response regulator TERM 1033 1104810 - 1104833 + g 76 -4.6 -5.03747 | gap 1, opp_overlap 1104810 1104816, overlap 1104807 TCACGGTTTCAACCA TGGA-AATCCC CAA GGGTTTATCCA TTTTTTGGCGGATTT HP1044 1106885 - 1105773 - | hypothetical protein TERM 1034 1105855 - 1105888 + g 93 -13.9 -2.99449 | opp_overlap 1105851, overlap 1105850 ATCCCCCAATACCCT GCCCCACTGCTCACA TAAA TTTGAGTGGTGGGGC TGTGCTTGTATAAAC TERM 1035 1106750 - 1106740 - G 76 -2.4 -5.49579 | opp_overlap 1106740 CTATAAAAAACAAAA GCCG CCT CGCC TATGCTCAAAAGGAT HP1045 1107083 - 1109071 + | acetyl-CoA synthetase TERM 1036 1109058 - 1109046 - T 80 -7.7 -4.32678 | TGGTTAAAGAAATAA TGAGC ATC GCTCA AATGGAGGAGTAAAA TERM 1037 1109102 - 1109075 - T 74 -8.6 -3.18292 | opp_overlap 1109075 1109074 1109083, overlap 1109074 ATGGAGGAGTAAAAT CTAAAAAATGCT TTTT AGCGTTTTTTAG CCAAATAATAAGAGT HP1046 1109619 - 1109179 - | hypothetical protein rbfA 1109947 - 1109612 - | ribosome-binding factor A infB 1112781 - 1109947 - | translation initiation factor IF-2 TERM 1038 1110672 - 1110682 + g 70 -5.4 -4.39828 | GAGCTTGCAAGCGCG CGAT GGA ATCG TTTTCTACCCCTATT HP1049 1113047 - 1112778 - | hypothetical protein HP1050 1113900 - 1113019 - | homoserine kinase TERM 1039 1113210 - 1113194 - GR 73 -8 -3.55444 | GCGTTATTTTCTAAA GCGATC TTTTG GATCGC AAACAACACGGGGTA HP1051 1114376 - 1113954 - | hypothetical protein lpxC 1115336 - 1114449 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase minC 1115986 - 1115333 - | septum formation inhibitor HP1054 1117191 - 1115923 - | hypothetical protein HP1055 1118199 - 1117255 - | hypothetical protein TERM 1040 1117766 - 1117744 - G 70 -5.6 -4.41241 | overlap 1117746 TAAATCCCCATAAAA TCGTGTCCCA AAA TAAGACACAA AGTATTTTTGATACC TERM 1041 1118083 - 1118093 + g 75 -2.6 -5.2422 | GGTGAGCTGTTGCTT TAAA TGG TTTA TTTTTTCATCTAATT HP1056 1119062 - 1118208 - | hypothetical protein HP1057 1119762 - 1119040 - | hypothetical protein TERM 1042 1120538 - 1120518 - g 79 -5.4 -4.86862 | CGCAAAAAATCAAAA TCCCCACG ATCGG CATAGGGA GCGGTAAAGATTGCG TERM 1043 1120698 - 1120687 - g 73 -5.8 -4.63527 | TGATGATGTGAAAAA GGGA AACT TCCC TAACGAATTAGAAAG panB 1119911 - 1120723 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1044 1121012 - 1120997 - g 79 -3.2 -5.39721 | overlap 1120970 CCATGATAGAAAAAA GCGG TGATTTAG CCGC CATTTTGACCAATTT ruvB 1120723 - 1121733 + | Holliday junction DNA helicase B HP1060 1121801 - 1122283 + | sec-independent translocase TERM 1045 1122832 - 1122816 - g 77 -9.5 -3.57462 | opp_overlap 1122814 1122816 1122830 GATGCGAGCTTGAAA GCGTATT TTA AATACGC TATTGTAGTGATTTT TERM 1046 1122816 - 1122832 + G 75 -9.5 -3.32405 | opp_overlap 1122816, overlap 1122814 1122830 GATGCGAGCTTGAAA GCGTATT TTA AATACGC TATTGTAGTGATTTT HP1061 1122276 - 1123037 + | hypothetical protein queA 1123038 - 1124075 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase gidB 1124072 - 1124608 + | glucose-inhibited division protein B HP1064 1124551 - 1124832 + | hypothetical protein HP1065 1124835 - 1125242 + | hypothetical protein HP1066 1125977 - 1125375 - | hypothetical protein TERM 1047 1126121 - 1126103 - H 74 -7.4 -4.06419 | overlap 1126106 TTTTTTTACAAATAA GAACGCTC ATT GAACGCTC CATTTAGCCAATGAT HP1067 1126268 - 1126642 + | chemotaxis protein (cheY) TERM 1048 1126814 - 1126800 - g 70 -8.6 -3.29144 | opp_overlap 1126800 1126799 1126797, overlap 1126788 CCATTGGGTTTATAA GCCAAT CCA ATTGGC ATTATTTCGCCACTC prmA 1126643 - 1127644 + | ribosomal protein L11 methyltransferase HP1069 1127653 - 1129551 + | cell division protein (ftsH) HP1070 1129554 - 1129808 + | hypothetical protein TERM 1049 1130501 - 1130483 - g 80 -6.2 -4.66833 | TTTTAATGGTAAAAA TTATTTTT AAT AAAAATAA AAGCGCATGAAAGAA HP1071 1129798 - 1130511 + | phosphatidylserine synthase (pssA) TERM 1050 1132641 - 1132678 + G 70 -7.9 -3.65425 | gap 1 CTTTATAAGGCTAAT CTCAT-GTTAAGCCCG GCGATTG CGGGTTTAGCGATGAG TTTAAGCTCTGTGAG HP1072 1130508 - 1132745 + | copper-transporting ATPase, P-type (copA) HP1073 1132746 - 1132946 + | copper ion binding protein (copP) HP1074 1133091 - 1133879 + | hypothetical protein HP1075 1135251 - 1133935 - | hypothetical protein TERM 1051 1134657 - 1134673 + g 81 -5.7 -5.1101 | overlap 1134660 1134661 GCATTTCTGTATCGC CTTGCGC GGT GCGCGTG TTTTTTAAATGATAC TERM 1052 1134661 - 1134671 + g 77 -8.2 -4.1821 | overlap 1134660 1134657 TTCTGTATCGCCTTG CGCG GTG CGCG TGTTTTTTAAATGAT TERM 1053 1135157 - 1135176 + g 74 -4.2 -5.02502 | overlap 1135158 GGGGCTTTGTCTCTA TCCTCTAC ATTT GTAGGGGC TTTTTCTATCATCTC TERM 1054 1135312 - 1135302 - H 71 -5.4 -4.72333 | opp_overlap 1135302 AATTATACCTAAAAA CCTT TTT AAGG GGGTTTTTTAAAGTT HP1076 1135386 - 1135901 + | hypothetical protein HP1077 1136900 - 1135905 - | nickel transport protein (nixA) TERM 1055 1136395 - 1136380 - G 71 -4.8 -4.53303 | GACTTGGAGACAAAA TTAAAC AAGG GTTTAA AAAAGCGGTTGAGCA HP1078 1137644 - 1136958 - | hypothetical protein HP1079 1138785 - 1137673 - | hypothetical protein TERM 1056 1137879 - 1137901 + g 79 -5 -5.03314 | AATTACCATCTTTAT TATTGTTGAT AAA ATCAATAGTA TTTTTTAACAATAAC HP1080 1139465 - 1138896 - | hypothetical protein TERM 1057 1139494 - 1139505 + r 72 -5.8 -4.37886 | TCTGCATTTTTTATA GCGT TCAA ACGC TTTTCTAAACCCTCC HP1081 1140092 - 1139469 - | hypothetical protein HP1082 1141741 - 1140086 - | multidrug resistance protein (msbA) TERM 1058 1140494 - 1140482 - G 79 -5.5 -4.85782 | CCCGTTAAAAATAAA CACCC TTT GAGTG ACAACGCTAATCTTT TERM 1059 1141700 - 1141678 - G 75 -2.8 -5.33124 | opp_overlap 1141679, overlap 1141679 AAGAAGAAAATAAAA CCACTATAAA ACT TTTATAATGC TCTTTAAGGTATTTA HP1083 1143272 - 1141833 - | hypothetical protein TERM 1060 1142491 - 1142476 - G 81 -5.4 -5.15117 | opp_overlap 1142476 GAAAATTGGAAAAAA GGGCTA ACGC TAACCC CTTTTCTTTCATAAG pyrB 1144450 - 1143527 - | aspartate carbamoyltransferase catalytic subunit TERM 1061 1144125 - 1144104 - G 71 -6.5 -4.28774 | opp_overlap 1144103 TCAGCCAATTTAAAA GGCGCGCTT GAAA AAGCATGCC GTGTGATGATAGCGT TERM 1062 1144539 - 1144549 + G 79 -3.2 -5.47964 | TGAAAAATCTCTCAA CACT TCT GGTG TTTTTATTCTTTTGT HP1085 1144517 - 1145032 + | hypothetical protein TERM 1063 1145674 - 1145652 - gf 71 -4.2 -4.89063 | overlap 1145673 CCATTTAAAAACAAA GGATTTTCAA ATC TTAAAGATCC AAGAAAGCTTAGTGA HP1086 1145032 - 1145739 + | hemolysin (tly) TERM 1064 1145783 - 1145795 + GF 77 -6.2 -4.59853 | GACGGCTTGCATTTA GGGC ATCAA GCCC TTTTTAAAGAGTTAA HP1087 1145705 - 1146547 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 1065 1146636 - 1146650 + G 79 -5.7 -4.96848 | opp_overlap 1146631 1146635 CGATTAAAAAGCATG GCGAA TGCAC TTCGC TTTTTGTGTGCGGAC TERM 1066 1147482 - 1147469 - g 74 -3.9 -5.06451 | CATTAGCCCAAAAAA CAAAA TGCA TTTTG AAGAAGTGAAAGTTA HP1088 1146594 - 1148519 + | transketolase TERM 1067 1149593 - 1149575 - g 76 -3.1 -5.27938 | gap 1, opp_overlap 1149577, overlap 1149569 AGCTCTAAAGAAAAA GCGC-CCT TAAA AGAAGCGC ATTCTCAAATCATGC TERM 1068 1150392 - 1150379 - g 73 -2.3 -5.24129 | GCTTTTTATAAAAAA GAGCG AGAA CGCTT TAATGCAGAAATCAC TERM 1069 1150811 - 1150797 - g 70 -2.9 -5.03314 | opp_overlap 1150797 TTGATTTTGAAAAAA CTTTA GAGGT TAAAG ATTGTGAGTATTGCT HP1089 1148516 - 1150852 + | hypothetical protein TERM 1070 1151386 - 1151368 - g 82 -3.8 -5.44119 | overlap 1151370 TTTAGCCCAAAAAAA GAGGGTTT TGA AAACACCC CATCAGATATTCAAA HP1090 1150840 - 1153416 + | cell division protein (ftsK) TERM 1071 1153867 - 1153888 + G 73 -2.1 -5.18357 | overlap 1153871 CATGCTAGGGTTTTT CATGCGCCC TTTG GGGAGTTTG TTTTTTGGTAAATTG TERM 1072 1153871 - 1153884 + G 74 -3.7 -5.0917 | overlap 1153867 CTAGGGTTTTTCATG CGCCC TTTG GGGAG TTTGTTTTTTGGTAA HP1091 1153676 - 1154956 + | alpha-ketoglutarate permease (kgtP) HP1092 1155009 - 1155818 + | flagellar basal-body rod protein (flgG) HP1093 1156222 - 1156136 - | hypothetical protein TERM 1073 1156715 - 1156738 + G 89 -6.6 -5.20534 | opp_overlap 1156716 1156721, overlap 1156716 TACTAGACTTGAATT ACCCAACCGC TAAA GCGATTGGGC TTTTTCTTGCTTCAT TERM 1074 1156716 - 1156737 + G 80 -10.1 -3.70694 | opp_overlap 1156716 1156721, overlap 1156715 ACTAGACTTGAATTA CCCAACCGC TAAA GCGATTGGG CTTTTTCTTGCTTCA TERM 1075 1156737 - 1156716 - g 83 -12.3 -2.74741 | opp_overlap 1156716 1156715, overlap 1156721 ACTAGACTTGAATTA CCCAACCGC TAAA GCGATTGGG CTTTTTCTTGCTTCA HP1094 1156399 - 1156755 + | hypothetical protein HP1095 1158007 - 1156724 - | IS605 transposase (tnpB) TERM 1076 1158202 - 1158178 - g 76 -2.3 -5.51046 | gap 1, opp_overlap 1158178 TAAATACAGAAAAAA GTTGTTGCAA GGGGAT TTG-AACAAC TTTATTAAGTCTGTT HP1096 1158077 - 1158505 + | IS605 transposase (tnpA) HP1097 1158698 - 1158603 - | hypothetical protein HP1098 1159591 - 1158719 - | hypothetical protein HP1099 1160287 - 1159661 - | 2-keto-3-deoxy-6-phosphogluconate aldolase (eda) TERM 1077 1159872 - 1159854 - G 71 -6 -4.27192 | AAAGGGCCATTAAAA GCGTTTAA AAG TTTAACGC CCCCGCAATACTCTG HP1100 1162132 - 1160306 - | phosphogluconate dehydratase TERM 1078 1161279 - 1161291 + g 74 -4.1 -5.1675 | ATTAAGCCTATAAGA GCGTT AAG AATGC TTTTTTCATCAATGA HP1101 1162198 - 1163475 + | glucose-6-phosphate 1-dehydrogenase TERM 1079 1163765 - 1163775 + G 70 -5.4 -4.43909 | opp_overlap 1163765 TTGTTGCAAAATAAC GCTT TAA AAGC TTCTTTTATTCCGCT HP1102 1163486 - 1164169 + | glucose-6-phosphate 1-dehydrogenase (devB) glk 1164156 - 1165166 + | glucokinase HP1104 1165328 - 1166374 + | cinnamyl-alcohol dehydrogenase ELI3-2 (cad) TERM 1080 1166384 - 1166409 + T 83 -10.5 -3.20361 | overlap 1166389 GATTAAAAGTTTTGG CTCTAGCTCTT TTTT AAGAGCTTGAG TTGGATTAGGATTTT HP1105 1167681 - 1166386 - | LPS biosynthesis protein HP1106 1167872 - 1169179 + | hypothetical protein HP1107 1169878 - 1169186 - | outer membrane protein (omp23) TERM 1081 1169999 - 1169983 - H 76 -7.3 -4.30719 | opp_overlap 1169983 TCTTTTTAGAATAAA TGGCCAT AAA ATAGCCA TAATTCTTGTAGGTA HP1108 1170138 - 1170698 + | pyruvate flavodoxin oxidoreductase subunit gamma porD 1170714 - 1171106 + | pyruvate flavodoxin oxidoreductase subunit delta porA 1171116 - 1172339 + | pyruvate flavodoxin oxidoreductase subunit alpha TERM 1082 1172419 - 1172445 + G 73 -8.7 -3.78934 | TTCAAGGCTCGCACT TGCTTTGCCCA GGTTG TGGGCATGGCA TTATTGTGCGCGAAG HP1111 1172352 - 1173296 + | ferrodoxin oxidoreductase beta subunit HP1112 1173406 - 1174728 + | adenylosuccinate lyase HP1113 1174794 - 1175627 + | outer membrane protein (omp24) HP1114 1177614 - 1175638 - | excinuclease ABC subunit B TERM 1083 1176368 - 1176357 - G 73 -7.2 -4.09864 | overlap 1176347 ATTTAGGGTCTAAAA GCCC TGTA GGGC GAATGATTTGCTCAG TERM 1084 1177313 - 1177301 - G 80 -7.7 -4.3255 | opp_overlap 1177299 1177296 TTTTCAATGAATAAA TCCCT CCT AGGGA TATAGCTTTCAGGCT TERM 1085 1177695 - 1177684 - R 74 -3 -5.47399 | TCAATCTCAAAAAAA TCAA TGTT TTGA TAATGATTGGTTTTT HP1115 1178370 - 1177684 - | hypothetical protein HP1116 1181257 - 1178384 - | hypothetical protein TERM 1086 1179611 - 1179631 + g 74 -4.7 -4.84274 | opp_overlap 1179611, overlap 1179612 AATGTTTTTTAATGA GTAGATGCT ATC AGCGTCTAA TTTTTGGTCTAATTC TERM 1087 1179855 - 1179843 - G 72 -3.3 -5.06414 | opp_overlap 1179852 CTCTCGTAAGAAAAA CGGCT TTT AGGCG TGAAGTTTAGCATGC HP1117 1182437 - 1181667 - | hypothetical protein HP1118 1184409 - 1182706 - | gamma-glutamyltranspeptidase (ggt) TERM 1088 1184356 - 1184342 - G 73 -8.6 -3.64703 | CTCGCCGCACTCAAA GGGTTT AAC AAACCC AAAAAGAGTGCTATC TERM 1089 1184377 - 1184362 - G 70 -3.2 -4.86939 | TAACAAACCCAAAAA GAGTGC TATC ACACCC AAGCCAATCGTTTTC flgK 1186440 - 1184620 - | flagellar hook-associated protein FlgK HP1120 1186876 - 1186442 - | hypothetical protein HP1121 1187943 - 1187005 - | cytosine specific DNA methyltransferase (BSP6IM) HP1122 1188335 - 1188105 - | hypothetical protein HP1123 1189167 - 1188610 - | peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase (slyD) TERM 1090 1188965 - 1188945 - G 71 -7.5 -3.85817 | AGCTGCTTTCATAAA CCCCATAAG CTT CCTCTGGGG CGATGACAACCTCTT HP1124 1190149 - 1189154 - | hypothetical protein HP1125 1190696 - 1190157 - | peptidoglycan associated lipoprotein precursor (omp18) TERM 1091 1190487 - 1190504 + g 70 -2.6 -5.06414 | AGAAGCGATGATAGT CCCGCT CTCAAC AGCCGG TTTTTCTTCAACCAC tolB 1192016 - 1190763 - | translocation protein TolB HP1127 1192594 - 1192013 - | hypothetical protein HP1128 1192838 - 1192584 - | hypothetical protein HP1129 1193258 - 1192857 - | biopolymer transport protein (exbD) TERM 1092 1192956 - 1192973 + g 76 -7.1 -4.17477 | TCGTTTGTCCGCACG GATACTA ACCC TAGTATC TTTATCGTATTTTTT HP1130 1193880 - 1193311 - | biopolymer transport protein (exbB) atpC 1194265 - 1193891 - | F0F1 ATP synthase subunit epsilon HP1132 1195682 - 1194273 - | F0F1 ATP synthase subunit beta HP1133 1196610 - 1195705 - | F0F1 ATP synthase subunit gamma TERM 1093 1195802 - 1195785 - G 78 -7.1 -4.35483 | opp_overlap 1195784 1195781 1195787 CTTTATTATAAGAAA TGGTTAA AGTT TTAACCA AATCTTTAGCGTTAT TERM 1094 1196541 - 1196552 + g 73 -2.2 -5.19916 | TGGAAACGAGTTTCA TCGC ATGC GTGA TTTTTTGCGTGTTTT HP1134 1198136 - 1196625 - | F0F1 ATP synthase subunit alpha HP1135 1198699 - 1198157 - | F0F1 ATP synthase subunit delta HP1136 1199215 - 1198700 - | F0F1 ATP synthase subunit B HP1137 1199653 - 1199219 - | F0F1 ATP synthase subunit B' HP1138 1200636 - 1199764 - | plasmid replication-partition related protein TERM 1095 1199815 - 1199825 + g 75 -5.4 -4.75309 | opp_overlap 1199815 1199813, overlap 1199810 AGAATTTTCATAACA TCGT AAA ACGA TTTTATTCCCTTTCA HP1139 1201433 - 1200639 - | SpoOJ regulator (soj) TERM 1096 1200810 - 1200798 - G 70 -2.7 -5.055 | TGAATCTCTAAAAAA TTCTG AGT CAAAA TACTTGAACAATTCC HP1140 1202074 - 1201436 - | biotin--protein ligase TERM 1097 1201794 - 1201804 + g 73 -6.8 -4.17523 | opp_overlap 1201783, overlap 1201783 TTAAGCCAGGTTTGA GAGC CTA GCTC TTTTAAAACTTCTTT fmt 1202982 - 1202071 - | methionyl-tRNA formyltransferase HP1142 1205285 - 1203006 - | hypothetical protein HP1143 1206626 - 1205325 - | hypothetical protein TERM 1098 1206077 - 1206090 + g 82 -3.9 -5.52384 | overlap 1206076 GCTCTTCTTGCTGCT TGAAT TTCA ATTCA TTTTTTTCATGCAAG HP1144 1206870 - 1207127 + | hypothetical protein TERM 1099 1209258 - 1209238 - T 71 -5.5 -4.57514 | opp_overlap 1209242 1209242, overlap 1209242 1209254 ACAACAAAACAGAAA GAAACTTTT TAA AAAGGTTTC GCTAAACGCTAACCT HP1145 1210142 - 1209831 - | hypothetical protein HP1146 1210711 - 1210202 - | hypothetical protein TERM 1100 1210897 - 1210917 + r 76 -5.5 -5.12707 | TTTTTGTATTTTGAT GGTAAAAAA CGC TTTTTAACC TTTTTTAAAATTTGA rplS 1211587 - 1211231 - | 50S ribosomal protein L19 TERM 1101 1211564 - 1211579 + g 70 -3.2 -4.91573 | TTGAGCGTCTTCAAA CTGCTG AATG TAGCGG TTTTTCATGTGTTTT trmD 1212298 - 1211609 - | tRNA (guanine-N(1)-)-methyltransferase HP1149 1212853 - 1212299 - | hypothetical protein TERM 1102 1212390 - 1212378 - G 86 -7.7 -4.96848 | overlap 1212358 TCTTGGATATAAAAA TCCCT ATA AGGGA TTAAAAAAATCTTAG TERM 1103 1212719 - 1212751 + g 76 -2.1 -5.41143 | opp_overlap 1212720, overlap 1212720 AGAAACGCAAGAGAA AGCGTTCAAGG-GAG CGACA CTCACCTT-AACGCC TTTTTTTAAGCACTC TERM 1104 1212750 - 1212720 - G 73 -6.8 -4.25401 | opp_overlap 1212719 1212720 GAAACGCAAGAGAAA GCGTTCAAGGGAGC GAC ACTCACCTTAACGC CTTTTTTTAAGCACT HP1150 1213201 - 1212854 - | hypothetical protein TERM 1105 1213077 - 1213063 - G 73 -7.1 -4.09685 | CTTTATCTTCTAAAA GCGTG TGTTC CACGC TCAAAGCTTGAGGAA rpsP 1213448 - 1213218 - | 30S ribosomal protein S16 HP1152 1214868 - 1213522 - | signal recognition particle protein (ffh) TERM 1106 1214751 - 1214765 + g 81 -2.8 -5.54192 | CTTTATGATGCACAT CGTTTT TTA AGAGCG TTTTTTTCAATTCAT valS 1217507 - 1214883 - | valyl-tRNA synthetase TERM 1107 1217374 - 1217385 + g 85 -3 -5.8187 | opp_overlap 1217374 GGGGGCATCATCAAG CAAA ATCG TTTG TTTTTTTCTTGGATC HP1154 1217638 - 1218045 + | flagellar assembly protein FliW TERM 1108 1218209 - 1218220 + G 74 -4.4 -5.00616 | overlap 1218217 AAATAGCCCCTTATT TAGC GAAC GCTA TTTTTTCAACACGCA TERM 1109 1218217 - 1218254 + G 72 -3.5 -5.0133 | gap 1, overlap 1218209 CCTTATTTAGCGAAC GCTATTTTTTCAACACGC AAG GCGTGGTCAATAAA-AGC TTTTTTAAAAAAATA murG 1218057 - 1219118 + | N-acetylglucosaminyl transferase HP1156 1219226 - 1221316 + | outer membrane protein (omp25) TERM 1110 1222534 - 1222504 - g 77 -6.2 -4.65263 | ACGCTTTAAAACAAA TTTCTTGGATCAGT TTT ACTGAGCCTAAAAA CTTACTCAAAAACAC TERM 1111 1224634 - 1224658 + G 73 -2.1 -5.25803 | overlap 1224627 GCGTGAAAGCGAATA TCTTTGCTTAT GGG GTAGGCACGGA TTTTTTATGGAACTT HP1157 1221339 - 1225031 + | outer membrane protein (omp26) TERM 1112 1225231 - 1225245 + G 75 -2.8 -5.18355 | opp_overlap 1225231 GACGCTATTGATATA CACCAA AAA TTCGTG TTTTTACTTTTTAAG TERM 1113 1225542 - 1225557 + G 72 -4.6 -4.67904 | opp_overlap 1225542 CAGCGTAGCGACAAA CGGGAG CGCG CTCGCG TTTTTAAGCTTGGTA HP1158 1225045 - 1225818 + | pyrroline-5-carboxylate reductase HP1159 1225846 - 1226379 + | cell filamentation protein (fic) HP1160 1226892 - 1226470 - | putative metalloprotease TERM 1114 1226920 - 1226936 + r 85 -10.9 -3.31322 | opp_overlap 1226920 AAGAAGTTTAAAAAA GCCCTAA AAT TTAGGGC TTATAAAAAATTAAG TERM 1115 1226936 - 1226920 - R 100 -10.9 -5.11937 | opp_overlap 1226920 AAGAAGTTTAAAAAA GCCCTAA AAT TTAGGGC TTATAAAAAATTAAG HP1161 1227441 - 1226947 - | flavodoxin FldA TERM 1116 1227491 - 1227471 - R 74 -9.7 -2.64872 | opp_overlap 1227471, overlap 1227470 TTTAAAGATATTAAC GCACCCGCT TTT AGCGAATGC TTGTGGGCGTAGTCT HP1162 1228145 - 1227531 - | hypothetical protein TERM 1117 1227739 - 1227729 - G 71 -4 -4.92314 | overlap 1227723 ATTAAGCCATAAAAA CTTT TTT AAAG GGTATTTGCTAAAAC HP1163 1228239 - 1228430 + | hypothetical protein TERM 1118 1229219 - 1229234 + G 72 -3.3 -5.02476 | overlap 1229230 1229232 GTATGCGATCGGCGG CTCTA CCCCTT TAGAG TTTTTTAAACGCTGT HP1164 1228455 - 1229429 + | thioredoxin reductase (trxB) HP1165 1230596 - 1229436 - | tetracycline resistance protein tetA(P), putative TERM 1119 1231520 - 1231538 + G 72 -9.6 -2.95298 | GAAGAAAAATTTTAA CGCTCTTT TGA AAGGAGCG TATCTGATGGATGAG TERM 1120 1232022 - 1232033 + G 79 -5.8 -5.00616 | GCCAAAGATTTAGCC CACC ACAG GGTG TTTTTTGGCAACCGC HP1166 1230660 - 1232297 + | glucose-6-phosphate isomerase TERM 1121 1232378 - 1232395 + F 82 -8.5 -4.09243 | opp_overlap 1232375 1232378 ATCCGTTCAAAATCA TCCGTTA ATCA TAACGGA TTTTAGCGCCATATA TERM 1122 1232395 - 1232378 - f 72 -8.5 -3.08211 | opp_overlap 1232378, overlap 1232375 ATCCGTTCAAAATCA TCCGTTA ATCA TAACGGA TTTTAGCGCCATATA TERM 1123 1233032 - 1233048 + G 75 -9.5 -3.35349 | TATGTCTTTAGCGAC GCGTATT TAG AATACGC TTATAAGAATTATTT HP1167 1232603 - 1234018 + | hypothetical protein TERM 1124 1234274 - 1234287 + T 100 -8.1 -5.4505 | opp_overlap 1234273 1234274, overlap 1234286 TCTATGGATTTAAAG GGGGT TAAA ACCCC TTTTTTATTCAAGAG HP1168 1236359 - 1234296 - | carbon starvation protein (cstA) TERM 1125 1234463 - 1234475 + g 75 -5.5 -4.75372 | AAAAGGATTTTTGGA GCGTT TTG AGCGC TTTTTCATCGGTAGT TERM 1126 1235041 - 1235029 - G 85 -9.1 -4.15854 | AAACCGATCGCAAAA GTGGG CGC CCCAC CGGTGCGGCTCAAAA HP1169 1236572 - 1237225 + | glutamine ABC transporter, permease protein (glnP) TERM 1127 1237808 - 1237820 + G 75 -2.7 -5.22258 | CTTTGTGGTTTATGG CGTTA TCT TAATG TTTTATTTTAGTTTA HP1170 1237227 - 1237898 + | glutamine ABC transporter, permease protein (glnP) TERM 1128 1238019 - 1238033 + G 70 -2.8 -5.05782 | opp_overlap 1238030 TTTAGGGCCTAGCGG GTGC GGGAAAA GCAC TTTTTTAAAATGCCT HP1171 1237900 - 1238646 + | glutamine ABC transporter, ATP-binding protein HP1172 1238695 - 1239528 + | glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) TERM 1129 1239568 - 1239582 + F 80 -7.2 -4.62069 | overlap 1239571 CAGGGTGCGTTTTTA TTGCTA AAT TAGCAA TTTTGTGATCTTTTT HP1173 1239650 - 1240201 + | hypothetical protein HP1174 1241696 - 1240473 - | glucose/galactose transporter (gluP) HP1175 1243132 - 1241825 - | hypothetical protein TERM 1130 1241953 - 1241933 - G 90 -8.9 -5.16133 | ACTATAAGACAAAAA GCCAAAGGC TAA GCCATCGGC AATGGAGAAGGTTAA TERM 1131 1242826 - 1242811 - G 76 -4.6 -5.10601 | overlap 1242812 ACAAAATCACAAAAA TCGCTC CCGA GAGCGC TACGATGCCTAAAGC TERM 1132 1242825 - 1242812 - G 70 -8.1 -3.6392 | overlap 1242811 CAAAATCACAAAAAT CGCTC CCGA GAGCG CTACGATGCCTAAAG HP1176 1243482 - 1243378 - | hypothetical protein TERM 1133 1243422 - 1243408 - G 73 -5.6 -4.64861 | opp_overlap 1243408 1243409, overlap 1243409 1243410 TTGTTGCAAAACAAA CGCCCC ATA AGAGCG ATTATGGGGATAAAT TERM 1134 1243559 - 1243579 + r 85 -8.3 -4.72272 | opp_overlap 1243557 1243556 AGGTTTTTTAAAGCC CCCCCTTTT TTA AAAAGAGGG TTTTTAATAGGCAAA HP1177 1245508 - 1243583 - | outer membrane protein (omp27) TERM 1135 1244457 - 1244472 + g 72 -3.2 -5.0538 | ATTTCTGCTTGAGAT TGCGCA TTTT TGAGCA TTTTTTGAGCTAAAG TERM 1136 1244902 - 1244914 + g 77 -7.7 -4.19276 | opp_overlap 1244901, overlap 1244910 TGCTATTTAAAGGAG CAAGC CCG GCTTG TTTTAAAGCTTTTGA TERM 1137 1245462 - 1245433 - G 76 -2.1 -5.42259 | gap 1, overlap 1245418 1245417 CCACGCTTAAAAAAA CGCCGTTGTCTTCA GCA TGGAG-CAATGACG CCGCGAGAGTTAGAG TERM 1138 1245730 - 1245703 - R 80 -7.1 -4.64861 | overlap 1245705 1245706 TTGTTGTAAAATAAA CACCCCCATAA GTGCAA TTATGGGGATA AATCCATAAAAGGAG TERM 1139 1245728 - 1245705 - R 74 -7.5 -3.93868 | overlap 1245703 1245706 GTTGTAAAATAAACA CCCCCATAA GTGCAA TTATGGGGA TAAATCCATAAAAGG TERM 1140 1245727 - 1245706 - R 71 -8.8 -2.95598 | overlap 1245705 1245703 TTGTAAAATAAACAC CCCCATAA GTGCAA TTATGGGG ATAAATCCATAAAAG TERM 1141 1245786 - 1245821 + r 70 -6.3 -4.31859 | opp_overlap 1245788, overlap 1245783 AAAACTCTTGGAAAA CATTATACCTCAAAA TTTCAT TTTTGGGGTGTAAAG TTGTTGTTTTATTGA TERM 1142 1245896 - 1245920 + r 100 -13.7 -4.59424 | opp_overlap 1245894, overlap 1245913 AGTTTTTCCAAAGTT CCCTTAAGGCT TTT AGCTTTAAGGG TTTTCCTTTAAATTT TERM 1143 1245913 - 1245932 + r 74 -5.8 -4.56093 | opp_overlap 1245894, overlap 1245896 CTTAAGGCTTTTAGC TTTAAGGG TTTT CCTTTAAA TTTTATCCTTAACTT HP1178 1246665 - 1245964 - | purine-nucleoside phosphorylase (deoD) HP1179 1247903 - 1246662 - | phosphopentomutase HP1180 1249171 - 1247915 - | pyrimidine nucleoside transport protein (nupC) TERM 1144 1250118 - 1250136 + G 71 -3.8 -4.93296 | opp_overlap 1250104 1250121, overlap 1250104 1250105 1250121 AGCTCTTTTTTTGAA AAAGCGTT CAT GACGCTTA TTTTTGTGCTGATCC TERM 1145 1250121 - 1250133 + G 73 -5.5 -4.56153 | opp_overlap 1250104 1250121, overlap 1250104 1250105 1250118 TCTTTTTTTGAAAAA GCGTT CAT GACGC TTATTTTTGTGCTGA TERM 1146 1250133 - 1250121 - g 71 -4.8 -4.56597 | opp_overlap 1250104 1250105 1250121 1250118, overlap 1250104 TCTTTTTTTGAAAAA GCGT TCATG ACGC TTATTTTTGTGCTGA HP1181 1249488 - 1250819 + | multidrug-efflux transporter TERM 1147 1250884 - 1250862 - g 85 -7 -5.07107 | GAAATTTCTAAAAAA GTCTTACACA TTG TGGGCAAGAC CAACGCCACTTACAA TERM 1148 1251514 - 1251502 - g 77 -6.3 -4.65263 | ATTTCTTAAAAGAAA TGCAA AAC TTGCA CCCTCGTTTCTTTGA HP1182 1250838 - 1251599 + | hypothetical protein TERM 1149 1251600 - 1251613 + T 72 -2.4 -5.49234 | TATTTAGACGCTTAA GCTT TCATTC AAGC TTTTTTGTTGAGTAT HP1183 1252759 - 1251608 - | Na+/H+ antiporter (napA) HP1184 1254164 - 1252785 - | hypothetical protein TERM 1150 1252822 - 1252835 + g 76 -2.3 -5.40004 | opp_overlap 1252822, overlap 1252804 TTTTTCTCTTTATAA GTGGT AAAA ACCCC TTTTTTGATTTCGTA HP1185 1255500 - 1254325 - | sugar efflux transporter TERM 1151 1254637 - 1254627 - G 85 -5.4 -5.19879 | TTTTAAACACAAAAA GCAA GAG TTGC GGGCAAATGACTAAA TERM 1152 1255072 - 1255092 + g 100 -6.1 -5.80003 | opp_overlap 1255077 CGAACTCCCTAACGC TAACAGCCC TAA GGCCTGTTG TTTTTTATTTCTTGG TERM 1153 1255442 - 1255432 - G 74 -4.6 -4.85782 | GGTGTTAAAAATAAA CGCC GAA AGCG AAAACACAAAAACCC TERM 1154 1255880 - 1255861 - g 76 -3.5 -5.18297 | TAAGAATAAAGAAAA TGGCCCA CACCGC TGGGACA AATTGCACAAAGATT HP1186 1255772 - 1256380 + | carbonic anhydrase TERM 1155 1256556 - 1256535 - T 100 -10.9 -4.35524 | CCGCTAAATTTAAAA CCCCCTCTT TTAA AAGAGGGAG GTAAAAATCATTCTT HP1187 1257903 - 1256746 - | hypothetical protein TERM 1156 1258037 - 1258027 - R 71 -5.4 -4.65916 | opp_overlap 1258022 1258027 TCCATTCCAATAAAA CTTG ATA CAAG TTTTCCTTATACCTT TERM 1157 1258080 - 1258056 - R 70 -7.1 -3.63627 | TCCTTATACCTTAAA CTCACACCCTT TTA AAGGGAGCAAG CTAATAAGCGATTTT HP1188 1259059 - 1258250 - | hypothetical protein TERM 1158 1258674 - 1258694 + g 71 -3.9 -4.88258 | opp_overlap 1258673 1258674, overlap 1258676 TTTTTCATAAAGAAT TGGCCATGA TTT TCTTGGCAA TTTTGTTCTGCTTTT TERM 1159 1259339 - 1259329 - R 71 -5.4 -4.65916 | opp_overlap 1259324 1259329 TCCATTCCAACAAAA CTTG ATA CAAG TTTTCCTTATACCTT HP1189 1260659 - 1259619 - | aspartate-semialdehyde dehydrogenase TERM 1160 1259822 - 1259832 + g 76 -4.6 -5.055 | opp_overlap 1259816 1259818, overlap 1259818 CATCGCAAACAGCCA CGCT AGG GGCG TTTTTTAAAACTTCA hisS 1261974 - 1260646 - | histidyl-tRNA synthetase HP1191 1262036 - 1263085 + | ADP-heptose-LPS heptosyltransferase II RfaF TERM 1161 1263088 - 1263100 + T 72 -2.6 -5.40072 | AGAAGAGCCTTAAAC GCCT TTCAT GGGC TTTTTTTAAAAACGC TERM 1162 1263267 - 1263230 - T 71 -7.9 -3.50929 | opp_overlap 1263241, overlap 1263224 1263232 1263241 GAAATTATAGGATAA TATCCAAAAAAGCGTTT TTAA AAACGCTTTTTTAGAGT CAAAGCCATTAGACC TERM 1163 1263265 - 1263232 - T 100 -14.9 -3.31766 | opp_overlap 1263241, overlap 1263224 1263230 1263241 AATTATAGGATAATA TCCAAAAAAGCGTTT TTAA AAACGCTTTTTTAGA GTCAAAGCCATTAGA TERM 1164 1263256 - 1263241 - T 91 -7.6 -5.17054 | opp_overlap 1263241, overlap 1263232 1263230 ATAATATCCAAAAAA GCGTTT TTAA AAACGC TTTTTTAGAGTCAAA TERM 1165 1263241 - 1263256 + T 89 -7.6 -5.0538 | opp_overlap 1263241 1263232 1263230 ATAATATCCAAAAAA GCGTTT TTAA AAACGC TTTTTTAGAGTCAAA HP1192 1263557 - 1263276 - | secreted protein involved in flagellar motility TERM 1166 1263643 - 1263624 - H 90 -9.4 -4.31 | opp_overlap 1263624 GTAAATGAATAGAAA CCAATCAA ATTT TTGATTGG TTTGGTGGTTTTGCT TERM 1167 1263624 - 1263643 + H 83 -9.4 -3.93659 | opp_overlap 1263624 GTAAATGAATAGAAA CCAATCAA ATTT TTGATTGG TTTGGTGGTTTTGCT HP1193 1263775 - 1264764 + | aldo-keto reductase, putative HP1194 1265021 - 1264935 - | hypothetical protein HP1195 1267386 - 1265308 - | elongation factor G HP1196 1267865 - 1267398 - | 30S ribosomal protein S7 rpsL 1268288 - 1267881 - | 30S ribosomal protein S12 TERM 1168 1268279 - 1268290 + g 70 -3 -5.01845 | TAATCAGCTGATTGA TAGT AGGC ACTA TTTTTCCTTATTCTA HP1198 1277049 - 1268377 - | DNA-directed RNA polymerase subunit beta/beta' TERM 1169 1272813 - 1272824 + g 76 -4.4 -5.02074 | opp_overlap 1272813 TAACTTCCCCATAAC TCCA AGAA TGGA TTTTTTCAGGGCTAG TERM 1170 1276192 - 1276204 + g 82 -6.3 -4.89521 | overlap 1276181 CATAGGGTATTCCAC CCATT CTA AATGG TTTTCTTTAAGCTCT TERM 1171 1277239 - 1277262 + r 74 -5.3 -4.75308 | opp_overlap 1277241, overlap 1277241 TGCCGCACTAGATCA GAGAAAGGC GCAAAG GCCTTTCTG TTTTTAAGTCTTACT TERM 1172 1277241 - 1277260 + r 77 -7.9 -3.98606 | opp_overlap 1277241, overlap 1277239 CCGCACTAGATCAGA GAAAGGC GCAAAG GCCTTTC TGTTTTTAAGTCTTA rplL 1277650 - 1277273 - | 50S ribosomal protein L7/L12 rplJ 1278190 - 1277696 - | 50S ribosomal protein L10 rplA 1279003 - 1278299 - | 50S ribosomal protein L1 TERM 1173 1278481 - 1278497 + g 77 -5.1 -4.83615 | TCGCCTTACCAATAG GGGCA TGAACAT TGCCC TTTTTATCCACCCTG rplK 1279473 - 1279048 - | 50S ribosomal protein L11 nusG 1280021 - 1279491 - | transcription antitermination protein NusG secE 1280227 - 1280048 - | preprotein translocase subunit SecE TERM 1174 1280338 - 1280328 - R 70 -4 -4.95854 | TAAAAAATTTAAAAA CAAT CCA ATTG AAACACAAATTTGAT rpmG 1280643 - 1280485 - | 50S ribosomal protein L33 tuf 1281878 - 1280679 - | elongation factor Tu TERM 1175 1282038 - 1282054 + H 74 -9.5 -2.65815 | opp_overlap 1282028 1282050 TTGAACCGCCGACCT CTTCCTT ACC AAGGAAG TGCTCTGCCTCTGAG TERM 1176 1284009 - 1284020 + G 75 -3 -5.24129 | GGTGTGCAAAATGGC TCAT ATTT ATGA TTTTTTATGCGAGCA HP1206 1282579 - 1284315 + | multidrug resistance protein (hetA) HP1207 1284992 - 1284324 - | hypothetical protein HP1208 1286182 - 1285193 - | ulcer associated adenine specific DNA methyltransferase HP1209 1286709 - 1286191 - | ulcer-associated gene restriction endonuclease (iceA) HP1210 1287484 - 1286969 - | serine acetyltransferase (cysE) TERM 1177 1287327 - 1287305 - G 79 -9 -3.92373 | TATCCCAGTGATAAA GCGCGCTAAC TGA GAAAGCGCGC GCGCAATGAAGTAAA HP1211 1287786 - 1288031 + | hypothetical protein TERM 1178 1288075 - 1288044 - T 83 -10.4 -3.03513 | gap 1, overlap 1288039 1288037 TAAACAAATATTATA GCTAAATCAC-GCTT TTT AAGCAATGATTTAGC CCAACAAAACCCTTA HP1212 1288405 - 1288088 - | F0F1 ATP synthase subunit C HP1213 1290604 - 1288538 - | polynucleotide phosphorylase/polyadenylase TERM 1179 1289601 - 1289587 - G 75 -5.6 -4.67982 | overlap 1289591 CCCTAGTGAATAAAA TGGAGC TAT GCGCCA TAGGGAGCAAATCGC TERM 1180 1290100 - 1290090 - G 70 -5.4 -4.31293 | opp_overlap 1290090 CCAGACACGAACAAA TCCA AAC TGGA TTGATTCAAAAGGCT HP1214 1291329 - 1290607 - | hypothetical protein HP1215 1291568 - 1291326 - | hypothetical protein HP1216 1293586 - 1291604 - | hypothetical protein TERM 1181 1292534 - 1292522 - G 71 -6.3 -4.14633 | CAGGTTTAAAAAATA CTTGA TAT TCAAG CCGTAATAATTGTTT HP1217 1294068 - 1293589 - | hypothetical protein TERM 1182 1294105 - 1294080 - R 83 -7 -4.89063 | opp_overlap 1294085 1294096 GCATTCAAAAACAAA CAAGACAAAC TCTTTG GTTTGTCTTA AACTTTAACCTTTAA HP1218 1295391 - 1294117 - | glycinamide ribonucleotide synthetase (purD) HP1219 1295511 - 1295702 + | hypothetical protein HP1220 1296390 - 1295704 - | ABC transporter, ATP-binding protein (yhcG) HP1221 1297088 - 1296384 - | hypothetical protein HP1222 1299975 - 1297129 - | D-lactate dehydrogenase (dld) TERM 1183 1297836 - 1297847 + g 85 -5.8 -5.18371 | AAATGACTTTTTCTT CGCT CTTA AGCG TTTTATTTTCTAAAG TERM 1184 1298012 - 1298000 - G 76 -3.3 -5.27335 | opp_overlap 1298000 1298004 CTTTTTAAAGAAAAA CGAGC CAT GCTTG TGGTTGTTTGCATGT HP1223 1300041 - 1300373 + | hypothetical protein hemD 1300376 - 1301056 + | uroporphyrinogen-III synthase HP1225 1301104 - 1301496 + | hypothetical protein TERM 1185 1301501 - 1301512 + T 74 -5.8 -4.65747 | opp_overlap 1301501, overlap 1301491 1301510 GCATTCATTAAAAAA CGCT TTCT AGCG TTTTATTAACGCTTG TERM 1186 1301512 - 1301501 - T 83 -5.8 -5.1675 | opp_overlap 1301501 1301491 1301510 GCATTCATTAAAAAA CGCT TTCT AGCG TTTTATTAACGCTTG HP1226 1302605 - 1301547 - | coproporphyrinogen III oxidase TERM 1187 1301604 - 1301587 - G 72 -3.3 -5.14563 | opp_overlap 1301589 1301591 1301592, overlap 1301588 TCGGCCATGAAAAAA TCGCTCG CTAT CAAGCGG TTATTTTTAATGAAA TERM 1188 1302165 - 1302180 + g 83 -7.6 -4.66953 | TTTTAAAATAGTTTC TATCGC AGGA GCGATA TTTTTGGAATGTTGG TERM 1189 1302813 - 1302799 - g 72 -4.3 -4.66535 | AAGTTTGAAAAGAAA GCTTT AGGCA AAAGC AAAATCGTCAACATG HP1227 1302679 - 1302969 + | cytochrome c553 HP1228 1303120 - 1303587 + | dinucleoside polyphosphate hydrolase TERM 1190 1304657 - 1304667 + G 71 -6.8 -4.08767 | TCGCATTCTGGGGTG GCGA GTA TCGC TTTTAAAGCCCTAGC HP1229 1303589 - 1304806 + | aspartate kinase HP1230 1304803 - 1305345 + | hypothetical protein HP1231 1305342 - 1305998 + | DNA polymerase III subunit delta' HP1232 1305995 - 1307137 + | dihydropteroate synthase (folP) TERM 1191 1307186 - 1307197 + T 78 -5.8 -4.77438 | opp_overlap 1307186 TGGTCATCATCAAAA CGCT CAAA AGCG TTTTTGATAATCAAT HP1233 1307693 - 1307232 - | hypothetical protein TERM 1192 1308043 - 1308069 + H 83 -9.6 -3.92373 | opp_overlap 1308043 1308045 1308057 1308058 TAAGTCTTAATTAGA GATTTTAGGTTA AAC TACCCTAAAATC TTTATGGGTAAAATG TERM 1193 1308069 - 1308043 - H 75 -9.6 -2.91199 | opp_overlap 1308043, overlap 1308045 1308057 1308058 TAAGTCTTAATTAGA GATTTTAGGTTA AAC TACCCTAAAATC TTTATGGGTAAAATG HP1234 1308086 - 1308982 + | hypothetical protein HP1235 1308986 - 1310233 + | hypothetical protein HP1236 1310312 - 1310863 + | hypothetical protein TERM 1194 1311578 - 1311557 - g 76 -2.3 -5.36018 | gap 1 ATGAAAAAAAAGAAA TTAGCG-GGA TTT TCCTCTCTAA CGGGCCGGGCGATCC HP1237 1310863 - 1311990 + | carbamoyl phosphate synthase small subunit TERM 1195 1312376 - 1312358 - g 72 -9.6 -3.04322 | opp_overlap 1312356 CGCAAGGTTTGAATA CCGCTAAG TGG CTTAGCGA AGAGTTTTTATTAGA amiF 1312156 - 1313160 + | formamidase TERM 1196 1313181 - 1313206 + T 85 -8.3 -4.69464 | opp_overlap 1313187 AACCTTGCATTTTTG CTAGAACCCGT TTTT AAGGGTTCTGG TTTTTCCCCTATTTT HP1239 1313501 - 1313412 - | hypothetical protein maf 1314186 - 1313614 - | Maf-like protein alaS 1316731 - 1314188 - | alanyl-tRNA synthetase TERM 1197 1314371 - 1314391 + g 70 -2.6 -5.00884 | overlap 1314369 1314373 TTTCACCCCGCATGC GAGAGTGA TTCGC TCATTTTC TTTTTTAAACACCAT TERM 1198 1314580 - 1314590 + g 70 -5.4 -4.44608 | GCTTATTGATACCGG CGAT CAC ATCG TTATTTTTCAATAAA TERM 1199 1315109 - 1315126 + g 89 -5.5 -5.4477 | overlap 1315098 1315110 CTCATCGCTCACTTG CGCGATC ACTT GATCGCC TTTTTTTAGCGCTTT TERM 1200 1315110 - 1315125 + g 79 -9 -3.85235 | overlap 1315098 1315109 TCATCGCTCACTTGC GCGATC ACTT GATCGC CTTTTTTTAGCGCTT TERM 1201 1316724 - 1316714 - G 75 -5.4 -4.77925 | opp_overlap 1316722 AAAAAATTGTAAAAA TTCG TTG CGAA TATCCATGGGTATTC HP1242 1316851 - 1317081 + | hypothetical protein TERM 1202 1317616 - 1317600 - T 70 -4.4 -4.86385 | opp_overlap 1317600 AGCTTTAAAAAGAAA CCCCTT AAAAA AAGAGG GTTTAAAAAAAAGGG TERM 1203 1317679 - 1317656 - T 72 -2.4 -5.44119 | opp_overlap 1317659 1317660, overlap 1317641 1317660 GGGAGTTCAAAAAAA GAAATCCCTT AAAA AAGGGAGTTT AAAAACGAAAGGGTT TERM 1204 1317675 - 1317660 - T 91 -7.6 -5.20328 | opp_overlap 1317660 1317659, overlap 1317641 1317656 GTTCAAAAAAAGAAA TCCCTT AAAA AAGGGA GTTTAAAAACGAAAG TERM 1205 1317793 - 1317757 - T 79 -2.4 -5.82388 | opp_overlap 1317760 1317761, overlap 1317761 AAAGCTTAAAAAAAA GAAATCTCTTTAAAAA GAGAA TTTAAAAAGAGAGTTC AAAAAAAAACCCCTT TERM 1206 1317776 - 1317761 - T 88 -6.2 -5.33985 | opp_overlap 1317761 1317760, overlap 1317757 CTTAAAAAAAAGAAA TCTCTT TAAA AAGAGA ATTTAAAAAGAGAGT TERM 1207 1317817 - 1317803 - T 100 -6.4 -6.09133 | opp_overlap 1317803 1317803, overlap 1317804 GAGTTCAAAAAAAAA CCCCTT AAA AAGGGA GTTTCACAAAGAGCC TERM 1208 1317816 - 1317804 - T 80 -7.7 -4.23853 | opp_overlap 1317803 1317803, overlap 1317803 AGTTCAAAAAAAAAC CCCTT AAA AAGGG AGTTTCACAAAGAGC HP1243 1320039 - 1317838 - | outer membrane protein (omp28) TERM 1209 1319504 - 1319515 + g 72 -4.4 -4.6902 | TGGAGGATCTGATAG GCTT CGTT AAGC TTTTTAAAATTCTCA rpsR 1320595 - 1320338 - | 30S ribosomal protein S18 HP1245 1321157 - 1320618 - | single-strand DNA-binding protein rpsF 1321595 - 1321167 - | 30S ribosomal protein S6 TERM 1210 1321744 - 1321734 - R 73 -4.6 -5.0925 | opp_overlap 1321734, overlap 1321728 GCTCAAAACGAAAAA CGCC TTA GGCA TTTTTTAGGGGTTAA HP1247 1322771 - 1321749 - | DNA polymerase III subunit delta HP1248 1324695 - 1322761 - | virulence associated protein homolog (vacB) TERM 1211 1323344 - 1323328 - G 80 -2.2 -5.59502 | TAAAAAAGGAAAAAA GCCC ATGTTTTTA GGGC GCACAATCTCATAAT TERM 1212 1323802 - 1323816 + g 82 -8.6 -4.26076 | opp_overlap 1323801 ATACACTAAAGCCAG GCGTTT TTC AAACGC TTTTAATGAGCATGC TERM 1213 1324323 - 1324339 + g 85 -3 -5.75342 | GCTCTTTAAAAGGGA TAGCCA CAATC TGGTTA TTTTTTTTAGCCAAG aroE 1325486 - 1324695 - | shikimate 5-dehydrogenase HP1250 1326072 - 1325494 - | hypothetical protein HP1251 1327127 - 1326081 - | oligopeptide ABC transporter, permease protein (oppB) TERM 1214 1326318 - 1326298 - G 85 -6.7 -5.04987 | overlap 1326300 AACATGCCCAAAAAA GCTTGCGGG AAA CCCGCCACC ACTAATAAAATCGCA TERM 1215 1326876 - 1326902 + g 80 -2.2 -5.61824 | overlap 1326875 1326878 GAGAAGGTAGCGCTC CCCTATGGGCTT GTC AAAACCATAGAG TTTTTTTAAATTTTC HP1252 1328908 - 1327124 - | oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (oppA) TERM 1216 1327253 - 1327242 - G 73 -2.2 -5.30616 | TTAGGCAAATAAAAA TGCG GTAT CACA TAAAACCCCCACAAC TERM 1217 1328002 - 1328013 + g 70 -5.8 -4.41548 | AGAAAAACCCTTGCA TGCC GCTT GGCA TTTTGTGGGCTATCA TERM 1218 1328143 - 1328133 - G 85 -6.8 -5.08824 | opp_overlap 1328141 GCCCCACTTAAAAAA GCCT GTA AGGC GATGGTTTCGTCTTT HP1253 1329928 - 1328909 - | tryptophanyl-tRNA synthetase TERM 1219 1328981 - 1328995 + g 73 -8.6 -3.79043 | overlap 1328974 GGCTTTTTCGGCTCC GCCATT TAA AATGGC TTTCACTTCATCATC HP1254 1330682 - 1329960 - | biotin synthesis protein (bioC) TERM 1220 1330746 - 1330777 + H 74 -6.8 -4.17089 | opp_overlap 1330746 GTATTCTTAGCAAAT TTTAGATAAGATCA AGCG TGATTTTTTCTAAA TTTTAGGCATTTAAG secG 1330799 - 1331404 + | preprotein translocase subunit SecG frr 1331404 - 1331961 + | ribosome recycling factor pyrE 1331965 - 1332570 + | orotate phosphoribosyltransferase TERM 1221 1332632 - 1332618 - g 84 -10 -3.89881 | opp_overlap 1332616 1332614 1332614 1332618 AGCAAGCGTTAGAAA GCCCTT TAA AAGGGC TGTATCTCTCTTTGC TERM 1222 1332618 - 1332632 + G 75 -10 -3.13082 | opp_overlap 1332618, overlap 1332616 1332614 1332614 AGCAAGCGTTAGAAA GCCCTT TAA AAGGGC TGTATCTCTCTTTGC TERM 1223 1332661 - 1332671 + G 74 -4 -5.06735 | GCGCCTAAAGGCCTT TATC ACC GATA TTTTTATGATTTATA HP1258 1332560 - 1333024 + | hypothetical protein HP1259 1333094 - 1333711 + | hypothetical protein HP1260 1333813 - 1334214 + | NADH dehydrogenase subunit A HP1261 1334214 - 1334693 + | NADH dehydrogenase subunit B HP1262 1334690 - 1335490 + | NADH dehydrogenase subunit C TERM 1224 1336535 - 1336553 + G 80 -4.6 -5.31456 | opp_overlap 1336535 TGCCCCCACAGAAAG CCCTAA AGGGGAA TTAGGG TTTTTTATCCATTCA HP1263 1335492 - 1336721 + | NADH dehydrogenase subunit D HP1264 1336718 - 1336948 + | hypothetical protein TERM 1225 1337623 - 1337633 + G 73 -6.8 -4.18197 | opp_overlap 1337623 1337622, overlap 1337611 ACAGCCTTTAAAGAG GGCA TTT TGCC TTTTAAATCGCAACT HP1265 1336951 - 1337937 + | hypothetical protein TERM 1226 1339278 - 1339261 - g 77 -6.3 -4.56597 | GCGCGGCCCTAAAAA GCTTAGA AGAT TCCAAGC AAAATATTGTAGATG TERM 1227 1339345 - 1339332 - g 76 -2.4 -5.52909 | GAAGAGCGAAAAAAA GCTT TAGAAC AAGC CGAGCAAGGGTGCAG HP1266 1337934 - 1340468 + | NADH dehydrogenase subunit G TERM 1228 1341209 - 1341222 + G 80 -2.3 -5.56263 | TTTTTAGCGGAATAC GCGCA TTTA TTCGC TTTTTCTTTTGTGAT HP1267 1340465 - 1341454 + | NADH dehydrogenase subunit H TERM 1229 1341968 - 1341980 + G 74 -4.8 -4.71482 | AGACGCTAAAAACTG CTCG CATGC CGAG TTTTTAGGCTTTGGT HP1268 1341465 - 1342127 + | NADH dehydrogenase subunit I HP1269 1342120 - 1342668 + | NADH dehydrogenase subunit J HP1270 1342665 - 1342967 + | NADH dehydrogenase subunit K TERM 1230 1344367 - 1344385 + G 82 -3.8 -5.41359 | overlap 1344357 TTTAGCGGTCATTGC CGGATTTT TTG AAGAGCCG TTTTTTCATTTCATT TERM 1231 1344460 - 1344475 + G 76 -9 -3.70773 | opp_overlap 1344456 TCTTTTAATCAGTAT CACCAC CATA GTGGTG TTATTGAGTATCGCC HP1271 1342970 - 1344808 + | NADH dehydrogenase subunit L TERM 1232 1344870 - 1344880 + G 71 -6.8 -4.06687 | TCCCCATGCTGAGCG CGCT ATT AGCG TTCTTTATGAGCGAT TERM 1233 1344914 - 1344927 + G 71 -6.7 -3.97659 | GCGAGTAGGGCGTAT GCGAT TGTC ATCGC TTTGATTGAATTGTT TERM 1234 1345045 - 1345066 + G 78 -3.7 -5.19251 | gap 1 CGTGAATTACCATGT GGGCGTTGAT GGC ATCG-CGCTC TTTTTGTTGCTCTTA HP1272 1344812 - 1346350 + | NADH dehydrogenase subunit M TERM 1235 1346659 - 1346672 + G 74 -5.3 -4.81852 | opp_overlap 1346659, overlap 1346670 AGCGCTTCAACGAAT TTCAG ACCG CTGAA TTTTATTCCTTATAC TERM 1236 1346868 - 1346884 + G 70 -2.9 -5.1523 | GCGAGCGCGTTTTTT GCTATGG GGG CGATGGC TTTTTATCTTCTCAC TERM 1237 1346972 - 1346984 + G 71 -4.1 -4.8622 | opp_overlap 1346958 CCCCATGCTCTTTGC GATGG GCG CTATC TTTTTGATTGGAGCG TERM 1238 1347439 - 1347412 - g 72 -3.4 -5.03747 | gap 1, opp_overlap 1347414 1347415, overlap 1347414 1347415 AAAGCCGGGAAAAAA CATGGGATGAACG CTA CGATCACCCC-TA TTCTAAATTCAACGG TERM 1239 1347438 - 1347414 - g 71 -6.3 -4.13963 | opp_overlap 1347414 1347415, overlap 1347412 1347415 AGCCGGGAAAAAACA TGGGATGAACG CTA CGATCACCCCT ATTCTAAATTCAACG TERM 1240 1347437 - 1347415 - g 72 -9.8 -3.07655 | opp_overlap 1347415 1347414, overlap 1347414 1347412 GCCGGGAAAAAACAT GGGATGAACG CTA CGATCACCCC TATTCTAAATTCAAC HP1273 1346337 - 1347809 + | NADH dehydrogenase subunit N TERM 1241 1347971 - 1347961 - g 86 -8.2 -4.87291 | TATGCTAATGAAAAA CCGC CAA GCGG GATTGAAGCGTCTTT TERM 1242 1348779 - 1348793 + G 74 -5 -4.82901 | GAGCAACGCTAACAT GCTTTT TAA AGAAGC TTTTTCTAACGCCAA TERM 1243 1349548 - 1349533 - g 76 -3.2 -5.27335 | overlap 1349535 TCGCTCAAAGAAAAA GCGCAA ATCA TTGCCC TAAACGCTTTTAAAA TERM 1244 1349995 - 1349983 - g 77 -7.7 -4.24326 | AAAGACTATTTAAAA GCGTT AGA AACGC TAGACAAACTTTTAA HP1274 1347799 - 1350204 + | paralysed flagella protein (pflA) TERM 1245 1350353 - 1350364 + G 76 -3.6 -5.27938 | GGGCATGACGCAAGG GTGC ATGG GCGC TTTTTGTTTGAAGCT TERM 1246 1350759 - 1350773 + G 79 -8.6 -4.12942 | overlap 1350762 1350769 ATGGCGTGGGAGCGT TAGGCT TAG AGCCTA TTTTAAAGGCTTTAA TERM 1247 1351344 - 1351332 - g 89 -5.5 -5.4505 | CGCCTGAAGAAAAAA TCGCC GTG AGCGA AGAAGAAAAATTTGA algC 1350206 - 1351585 + | phosphomannomutase HP1276 1351731 - 1352015 + | hypothetical protein trpA 1353151 - 1352363 - | tryptophan synthase subunit alpha HP1278 1354329 - 1353148 - | tryptophan synthase subunit beta HP1279 1355689 - 1354331 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 1248 1355175 - 1355190 + g 76 -7.6 -4.29227 | ATGTCGTATTGGAGT TTGAGC AAGT GCTCAA TTTCTTGCTGGTTGG trpD 1356689 - 1355682 - | anthranilate phosphoribosyltransferase TERM 1249 1355717 - 1355729 + g 74 -6.2 -4.33653 | opp_overlap 1355717 1355716, overlap 1355712 TGATTTTTTGCAAAT GCGC ATAAG GCGC TTTGGTTTTTAAATG HP1281 1357270 - 1356686 - | anthranilate synthase component II HP1282 1358769 - 1357267 - | anthranilate synthase component I TERM 1250 1358354 - 1358342 - G 76 -2 -5.4477 | AAATCTTCAAAAAAA TTGA GCATT TCAA AAGAAAAAACACCCG TERM 1251 1358444 - 1358421 - G 77 -6 -4.58283 | overlap 1358441 TAACGCTTTTAAAAA GCCCCCTTAA AGCG TCAAAAGGGC TAGGCTCAAAGAGTT TERM 1252 1358808 - 1358794 - R 72 -5 -4.87389 | TACGCTAAAAATAAA CTCGTA TTT TACAAG AAATAGATAAATGGG HP1283 1360449 - 1358992 - | hypothetical protein HP1284 1361587 - 1360547 - | hypothetical protein HP1285 1362349 - 1361657 - | hypothetical protein HP1286 1362519 - 1363067 + | hypothetical protein TERM 1253 1363074 - 1363103 + T 83 -6.6 -4.82901 | gap 1, overlap 1363075 GCCCAATAATCGTTT TGCAAGAGATAGA TATCT TCT-TCTCTTGCG TTTTTCTAACAGCAC TERM 1254 1363075 - 1363102 + T 71 -7.9 -3.49419 | gap 1, overlap 1363074 CCCAATAATCGTTTT GCAAGAGATAGA TATCT TCT-TCTCTTGC GTTTTTCTAACAGCA HP1287 1363784 - 1363131 - | transcriptional regulator (tenA) HP1288 1364308 - 1364706 + | hypothetical protein HP1289 1364730 - 1365215 + | hypothetical protein TERM 1255 1365270 - 1365256 - f 83 -5.8 -5.14563 | GGGGGGAGTAAAAAA TTAAAG AAA CTTTAA AGCGCGTTCTCACTG TERM 1256 1365556 - 1365568 + G 74 -6.3 -4.39414 | opp_overlap 1365556 1365555 TTTTGCCGGAGAAAG GCAAA CGA TTTGC TTTGTGTTTGGTCTT HP1290 1365401 - 1366063 + | nicotinamide mononucleotide transporter (pnuC) HP1291 1366051 - 1366665 + | hypothetical protein TERM 1257 1366965 - 1366977 + T 70 -4.1 -5.06451 | CCATCTAACTCAATC TCCAG CAG TTGGA TTTTTTAAAATCATC TERM 1258 1367360 - 1367330 - T 71 -7.6 -3.50481 | overlap 1367323 1367333 AAATCAAAGCGATAA CCACCAACCAAGAC TAA ATCTTGGCTAGCAG TTCATCAAATTTCAT rplQ 1367722 - 1367372 - | 50S ribosomal protein L17 HP1293 1368756 - 1367722 - | DNA-directed RNA polymerase subunit alpha rpsD 1369394 - 1368768 - | 30S ribosomal protein S4 HP1295 1369799 - 1369404 - | 30S ribosomal protein S11 rpsM 1370184 - 1369822 - | 30S ribosomal protein S13 rpmJ 1370301 - 1370188 - | 50S ribosomal protein L36 infA 1370598 - 1370380 - | translation initiation factor IF-1 HP1299 1371359 - 1370598 - | methionine aminopeptidase secY 1372621 - 1371359 - | preprotein translocase subunit SecY rplO 1373065 - 1372664 - | 50S ribosomal protein L15 rpsE 1373546 - 1373085 - | 30S ribosomal protein S5 rplR 1373902 - 1373543 - | 50S ribosomal protein L18 rplF 1374449 - 1373913 - | 50S ribosomal protein L6 rpsH 1374855 - 1374460 - | 30S ribosomal protein S8 rpsN 1375050 - 1374865 - | 30S ribosomal protein S14 rplE 1375605 - 1375060 - | 50S ribosomal protein L5 rplX 1375839 - 1375618 - | 50S ribosomal protein L24 rplN 1376207 - 1375839 - | 50S ribosomal protein L14 TERM 1259 1375978 - 1376002 + g 70 -2.9 -5.12785 | opp_overlap 1375979, overlap 1375979 TTGTCATCAAAACGC ACCAAAGAA CCATTTT TTCTTTGGA TTTCTTTTTTCGTTC rpsQ 1376470 - 1376210 - | 30S ribosomal protein S17 rpmC 1376683 - 1376483 - | 50S ribosomal protein L29 rplP 1377095 - 1376670 - | 50S ribosomal protein L16 rpsC 1377802 - 1377098 - | 30S ribosomal protein S3 rplV 1378174 - 1377806 - | 50S ribosomal protein L22 rpsS 1378465 - 1378184 - | 30S ribosomal protein S19 rplB 1379306 - 1378476 - | 50S ribosomal protein L2 TERM 1260 1378505 - 1378517 + g 87 -3.3 -5.73978 | TTCTGGAAATGATGA GCTTG TCG CTAGC TTTTTTCTTTCTCGT rplW 1379604 - 1379323 - | 50S ribosomal protein L23 rplD 1380255 - 1379608 - | 50S ribosomal protein L4 TERM 1261 1380084 - 1380103 + g 79 -4.9 -5.0925 | AAGGCTTCCTACCGC CCCCGCT CACTTC AGCGCGG TTTTTACTTTTAGCG rplC 1380865 - 1380290 - | 50S ribosomal protein L3 rpsJ 1381216 - 1380902 - | 30S ribosomal protein S10 TERM 1262 1382278 - 1382293 + G 72 -3.2 -5.0916 | opp_overlap 1382269 AAATATGAGCTTTAC TCCCAT GATA ACGGGA TTTTTATCTTGCGCG HP1321 1381381 - 1382514 + | hypothetical protein TERM 1263 1382694 - 1382713 + F 70 -4.3 -4.88129 | overlap 1382692 1382696 TTGAGAAATGCTACC TACCCTA AAAGCG TAGGGTG TTTTTAATGATTTTT HP1322 1382720 - 1383325 + | hypothetical protein HP1323 1383928 - 1383299 - | ribonuclease HII (rnhB) TERM 1264 1383809 - 1383831 + g 73 -2 -5.26875 | overlap 1383812 GCTGTCTTTTAAACC CATTTTTAGA AAT TCTAAGGCTG TTTTTTCATTACACG HP1324 1384195 - 1383944 - | hypothetical protein fumC 1385608 - 1384217 - | fumarate hydratase HP1326 1385783 - 1386160 + | hypothetical protein TERM 1265 1386369 - 1386381 + G 74 -4.8 -4.79451 | AAAGTCGTTAGCAAG TGGG ATAAC CCCA TTTTGTATTTAGGCT HP1327 1386165 - 1387403 + | hypothetical protein HP1328 1387400 - 1388416 + | cation efflux system protein (czcA) TERM 1266 1391445 - 1391459 + G 87 -6.4 -5.20333 | opp_overlap 1391445 GGGGCATGATAAGCA GCGTTG TTT TAACGC TTTTTATTATCCCTA HP1329 1388417 - 1391524 + | cation efflux system protein (czcA) HP1330 1391874 - 1391527 - | hypothetical protein HP1331 1392554 - 1391868 - | hypothetical protein HP1332 1393674 - 1392565 - | co-chaperone and heat shock protein (dnaJ) TERM 1267 1392785 - 1392803 + g 70 -3.1 -4.87893 | overlap 1392797 GCAAAAGTCTGCTTG TCTCTGG CGTTT CTAGGGA TTTTTAATTCCAGTT TERM 1268 1393447 - 1393461 + g 83 -6.4 -5.05782 | overlap 1393435 GCCTTGGCTTGCGCC GGCTTG GTT TAAGCC TTTTTTACCATACCT TERM 1269 1393734 - 1393753 + H 84 -10.8 -3.06796 | GCGATAATTTTGCGT GTTTTGGC GCAT GCCAAAAC TTAGATAAAATAACA TERM 1270 1394018 - 1394028 + G 76 -2.4 -5.40072 | opp_overlap 1394025 AACAGCACCCTAAAT AGCC AAA GGCG TTTTTTTAACGCCAG TERM 1271 1394041 - 1394025 - g 73 -8 -3.81137 | opp_overlap 1394018 CCCTAAATAGCCAAA GGCGTT TTTTT AACGCC AGCCAGATCCGCCTT TERM 1272 1394564 - 1394550 - g 75 -5.7 -4.70879 | TGGAAACTTTAAAAA CGCAT TTTTT ATGCG ATAAAGAAAACCTAA TERM 1273 1394631 - 1394617 - g 77 -7.8 -4.28361 | CCAACGCTACCAAAA CGCCCT TAT AGAGCG AGATAAAGAATTAAA TERM 1274 1394703 - 1394671 - g 75 -2.9 -5.20331 | gap 1 AAATAATAAAGAAAA GCATGCTC-TAATC TTAGCC AATTACGAGCATAC TTTAAAAACCTTGAA HP1333 1393799 - 1394947 + | hypothetical protein HP1334 1395156 - 1395830 + | hypothetical protein trmU 1396922 - 1395894 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1275 1396078 - 1396091 + g 71 -3.9 -4.88293 | opp_overlap 1396078 TCGCCATCTTTAAAA TCTTT CATT AAAGA TTTGTTTTTAGCCTT HP1336 1397061 - 1397822 + | hypothetical protein HP1337 1398343 - 1397819 - | hypothetical protein HP1338 1398773 - 1398327 - | nickel responsive regulator TERM 1276 1399160 - 1399172 + G 85 -5.5 -5.24449 | overlap 1399161 TTGTTTTTGCGGTGC TTGGC GTG GCCAG TTTTTTAGCTTTGTG HP1339 1399036 - 1399536 + | biopolymer transport protein (exbB) HP1340 1399533 - 1399922 + | biopolymer transport protein (exbD) TERM 1277 1399958 - 1399974 + GF 83 -9.5 -3.90874 | TTTTAATCTCTTTTG CCCTATA CGC TATAGGG TTTGGCTATTTTTTA HP1341 1399888 - 1400745 + | siderophore-mediated iron transport protein (tonB) TERM 1278 1400852 - 1400836 - f 84 -3.7 -5.79635 | overlap 1400837 1400845 AAAAAAAAAACAAAA TCTCTAA AAT TTAGAGC TAAAATTAGCCATAA TERM 1279 1400851 - 1400837 - f 74 -7.2 -3.99546 | overlap 1400836 1400845 AAAAAAAAACAAAAT CTCTAA AAT TTAGAG CTAAAATTAGCCATA TERM 1280 1400914 - 1400896 - f 72 -9 -2.64726 | opp_overlap 1400892, overlap 1400895 GCTTATAATATGAAG TTTCTTTG TAT CAAAGAAA AATCTATTAAAAGGA TERM 1281 1401271 - 1401293 + G 70 -2.7 -5.12068 | gap 1, opp_overlap 1401288 GCTCAATGCCGCTGT GGGCATGTGG CAAG TCATA-GCCC TTTTTATTGGCTGTG HP1342 1400936 - 1403011 + | outer membrane protein (omp29) HP1343 1403896 - 1403168 - | hypothetical protein TERM 1282 1403801 - 1403791 - G 71 -4 -4.93296 | TCACCATGATAAAAA TGAT GTT ATCA ATCCCTAAAATGATT TERM 1283 1403897 - 1403918 + r 89 -8.8 -4.62783 | opp_overlap 1403901, overlap 1403901 GGATAAAAATTCCAT GAAAGGCT ACAACC AGCCTTTC TTTTTAAAATAAATC HP1344 1404859 - 1403903 - | magnesium and cobalt transport protein (corA) TERM 1284 1404639 - 1404624 - G 74 -4.7 -5.00616 | TGGTTGGTGAAAAAA GCGTT GATCGT AACGC TGGAGCTGTCTTCCC pgk 1406083 - 1404875 - | phosphoglycerate kinase TERM 1285 1405802 - 1405792 - G 76 -3.2 -5.252 | TATTTTGAGAAAAAA CCAC TTC ATGG TTTAAGAGTCTTTCA HP1346 1407091 - 1406099 - | glyceraldehyde-3-phosphate dehydrogenase HP1347 1407881 - 1407180 - | uracil-DNA glycosylase TERM 1286 1407443 - 1407415 - G 71 -6.8 -4.11394 | gap 1 ATTTGATCGCTAAAA GCTTCCCAGCCAA TATA TTGG-TGCGAAGC GGCTTGGTTTTTTTC HP1348 1408600 - 1407878 - | 1-acyl-glycerol-3-phosphate acyltransferase (plsC) TERM 1287 1408486 - 1408457 - G 83 -3.3 -5.53288 | opp_overlap 1408457 1408473, overlap 1408464 GGTAAGGGAAAAAAA GCACGAACAAGCC CTAC GGCTGGAGCGGGC GTTATTGTTTTTGCG HP1349 1409750 - 1408587 - | hypothetical protein TERM 1288 1408883 - 1408869 - G 70 -2.7 -5.15167 | CAGCACCAAGAAAAA CACGC ACAAA GCGAG CAACGCCACATTAGA TERM 1289 1409693 - 1409668 - G 88 -7.8 -5.16237 | opp_overlap 1409667 1409668 AAGCTTACCAAAAAA CTTAAAATCA AACTGA TGATTTTAAG GATTTTGATTGGATG TERM 1290 1409739 - 1409759 + g 70 -5.5 -4.44667 | opp_overlap 1409728 1409739 TAACGATTTTTCAAA TAAAAACCC CAT GAGTTTTTA TTTCTTCTTAGGCGC HP1350 1411136 - 1409757 - | protease TERM 1291 1409980 - 1409990 + g 71 -4 -4.86613 | overlap 1409974 1409971 TTTAGATCCGCTTCT TTCA AGC TGAA TTTGTTTTCATTTTC TERM 1292 1410146 - 1410157 + g 76 -4.4 -5.02074 | GCATCTGCACGCTTC CCTT ACCA AAGG TTTTTTCACCGATAA TERM 1293 1410739 - 1410719 - G 72 -9.7 -3.05596 | opp_overlap 1410719 TATCGCCTGACTTAA CCCCAGCCT TGT AAGCTGGAG TGCCTTCTAAAGGGG TERM 1294 1411027 - 1411041 + g 81 -2.7 -5.64006 | overlap 1411028 TGCGGATCTTCTTTA ACCGG CTTAA CCGGC TTTTTTTCCTTAACT HP1351 1412218 - 1411346 - | hypothetical protein HP1352 1413297 - 1412218 - | adenine specific DNA methyltransferase (HINFIM) TERM 1295 1412296 - 1412312 + g 88 -8.7 -4.6759 | opp_overlap 1412295 CGCATAAAAAAATTT CCAGCCA TTA TGGTTGG TTTTATTCAAATATT HP1353 1414666 - 1413719 - | hypothetical protein TERM 1296 1414169 - 1414159 - GR 73 -6.8 -4.14392 | GTTCAATCCCTAAAA GGCT TAA AGCC CTAAACAAATCTTTA TERM 1297 1414414 - 1414384 - GR 79 -8.2 -3.97368 | GTTTGAATTGATAAA GGGGGTAATTGACC CCA GCTCCATTGCCCCC AGAGCTTAACCCCTG HP1354 1417043 - 1414536 - | putative adenine specific DNA methyltransferase TERM 1298 1414967 - 1414954 - GR 71 -3.7 -4.92777 | overlap 1414955 AACAGCAAGTAAAAA GGCCC TCTT GGGGC AATCTCAAGCCATTC TERM 1299 1416284 - 1416303 + gr 71 -5 -4.59773 | TTAAAAAATCCGCCA TTTCTCTG ATCA CAGCGAAA TTTTTAGGGATCAAA HP1355 1417889 - 1417068 - | nicotinate-nucleotide pyrophosphorylase HP1356 1418899 - 1417889 - | quinolinate synthetase TERM 1300 1418118 - 1418131 + g 70 -3.1 -4.86621 | gap 1, overlap 1418119 ACTAAATGGCTTTCA GT-GCC TAT GGCGAC TTTTTGATTAGGGCT TERM 1301 1418426 - 1418444 + g 83 -6.2 -5.07652 | CAAGCATTTATCCGG TAAAAAAA AGA TTTTTTTA TTTTGTTTTAAAGCG HP1357 1419692 - 1418889 - | phosphatidylserine decarboxylase HP1358 1420192 - 1419686 - | hypothetical protein HP1359 1420756 - 1420205 - | hypothetical protein ubiA 1421576 - 1420692 - | prenyltransferase TERM 1302 1421084 - 1421064 - GR 80 -6.2 -4.81249 | CCCTAAAGCCAAAAA GACATTCC ATAAA GGAATATC CCCCAAAACCGCCAC HP1361 1422858 - 1421605 - | competence locus E (comE3) HP1362 1424381 - 1422915 - | replicative DNA helicase HP1363 1425792 - 1424392 - | hypothetical protein TERM 1303 1425093 - 1425106 + g 82 -3.7 -5.38951 | GTGCATGCCCGTAAT CGCCC TTAT GAGCG TTTTTTCTATCCCTT HP1364 1426988 - 1425795 - | putative histidine kinase sensor protein TERM 1304 1425855 - 1425834 - GR 72 -5.8 -4.4017 | opp_overlap 1425838 CGAATTTTCATAAAA CGATCCCT TTAAAG AGGGTTCG CTATGAATTTCTAAA TERM 1305 1425981 - 1426002 + gr 74 -5.3 -4.81249 | gap 1 TTCTGTGATCTTGTC TTTAGGG-AT TTC ATACCCTAAA TTTTTCACTTTCAAA TERM 1306 1426179 - 1426194 + gr 74 -4.6 -4.95484 | overlap 1426181 GTGGTAGTCTATCAT CTCGCT AAAA AGCGTG TTTTCTTTAATAATC TERM 1307 1426934 - 1426955 + gr 100 -5.9 -5.88471 | opp_overlap 1426934 AAGAGCCTAAATAAA TCCCTAAAA AGAG TTTAAGGGA TTTTTTTTCATAGTG TERM 1308 1426955 - 1426934 - GR 72 -5.9 -4.4572 | opp_overlap 1426934 AAGAGCCTAAATAAA TCCCTAAAA AGAG TTTAAGGGA TTTTTTTTCATAGTG HP1365 1427604 - 1426963 - | response regulator HP1366 1428959 - 1427688 - | type IIS restriction enzyme R protein (MBOIIR) HP1367 1429757 - 1428975 - | type IIS restriction enzyme M1 protein (mod) TERM 1309 1429146 - 1429160 + g 73 -7.8 -3.87551 | GCTAGCTTTTATCAT GCGTTC AAT GAGCGC TTTAGGTTTGATGCT HP1368 1430607 - 1429744 - | type IIS restriction enzyme M2 protein (mod) TERM 1310 1432157 - 1432170 + G 73 -6.7 -4.21194 | GGAAAACCGCTTGGA GCTTG CGCG CAAGC TTTTGAATGATAAAG mod 1430856 - 1433284 + | adenine-specific DNA methylase TERM 1311 1434245 - 1434230 - g 71 -4.8 -4.63592 | opp_overlap 1434237 1434238, overlap 1434231 GTTGAAGAAAAACAA CTTAAA CGCT TTTAAG GAATTAAAAGATTTA TERM 1312 1435283 - 1435268 - g 79 -3.4 -5.49729 | opp_overlap 1435278 AATGAGCGAAAAAAA TTTTAA GGAT TTAAAA GAGTATTTTAATTTA TERM 1313 1435638 - 1435624 - g 93 -5.6 -5.63103 | CTCTAATCAAAAAAA TCGCGC AAG GCGAGA TCGATCCTTATGATA HP1371 1433295 - 1436201 + | type III restriction enzyme R protein TERM 1314 1436233 - 1436254 + T 74 -5.9 -4.62783 | overlap 1436234 TAAAAGATCCGCTTA TTAGCCTTG AATA TAAGGCTAG TTTTTCACATCGCTC HP1372 1436997 - 1436251 - | rod shape-determining protein (mreC) TERM 1315 1436298 - 1436311 + g 79 -6.7 -4.56597 | opp_overlap 1436290 TTAAAAGTTTAGCGC CGCTT AAAA AAGCG TTTTTCAGCACCGCG HP1373 1438044 - 1437001 - | rod shape-determining protein (mreB) clpX 1439427 - 1438087 - | ATP-dependent protease ATP-binding subunit TERM 1316 1438488 - 1438504 + g 73 -6.6 -4.22314 | opp_overlap 1438488 1438487 GGGTTTGGACTAAAT GCAAGA TCGCT TCTTGC TCTTTTTTGCTCATC HP1375 1440241 - 1439429 - | UDP-N-acetylglucosamine acyltransferase fabZ 1440724 - 1440245 - | (3R)-hydroxymyristoyl-ACP dehydratase HP1377 1441285 - 1440896 - | flagellar assembly protein FliW TERM 1317 1441662 - 1441650 - H 75 -2.7 -5.66338 | AAAGATAAGAAAAAA TAACC ATG AGTTA TTCAAAAATTTAACT TERM 1318 1441821 - 1441838 + G 77 -4.9 -4.84363 | overlap 1441806 TCTTTTGGTATCAAG GGATTTT GAGA GAAATCC TTTTTGCTAATTTAG TERM 1319 1442265 - 1442240 - g 76 -3.1 -5.25803 | opp_overlap 1442256 AATGTCTATAAAAAA CGCCACAAGCC TGAG GGCGTGAAACG CTATTTAGAAAGGAT HP1378 1441694 - 1442356 + | competence lipoprotein (comL) HP1379 1442398 - 1444905 + | ATP-dependent protease (lon) HP1380 1444944 - 1445741 + | prephenate dehydrogenase HP1381 1445793 - 1446026 + | hypothetical protein HP1382 1446477 - 1446085 - | hypothetical protein TERM 1320 1446249 - 1446259 + gF 74 -6.8 -4.29738 | opp_overlap 1446248 GGATATAAAAACATT CGCT TTT AGCG TTTTCATAGCTGTCC HP1383 1446446 - 1446928 + | restriction modification system S subunit HP1384 1447159 - 1446953 - | hypothetical protein TERM 1321 1447123 - 1447105 - G 73 -6.7 -4.19238 | opp_overlap 1447105 CTTGTAATTTCAAAA GAGCGTC ATTGA AACGCTC TTCATATTCTAATTT HP1385 1448028 - 1447156 - | fructose-1,6-bisphosphatase TERM 1322 1447916 - 1447926 + g 84 -6.8 -4.89393 | AACTTCGTGTAACTC CCAG CGT CTGG TTTTTCTAAAATTTC TERM 1323 1448387 - 1448371 - gH 72 -4.3 -4.73108 | overlap 1448372 TGCAGAAAATGAAAA GCACCCC CAC AGGGTGT TGCAACTCATTAAAA TERM 1324 1448386 - 1448372 - gH 71 -7.8 -3.4278 | overlap 1448371 GCAGAAAATGAAAAG CACCCC CAC AGGGTG TTGCAACTCATTAAA HP1386 1448099 - 1448752 + | ribulose-phosphate 3-epimerase TERM 1325 1448930 - 1448943 + GF 79 -3.1 -5.46129 | AAACCTTAAAACCCC CCTTA AAGA TGAGG TTTTTTCCTTTATTG HP1387 1448622 - 1449674 + | DNA polymerase III subunit epsilon TERM 1326 1449821 - 1449862 + F 73 -7.5 -3.73097 | gap 1, opp_overlap 1449832, overlap 1449822 1449832 1449834 ATCGTTTGTTTTTTT AAAGCAAAAAAGCCCCTTAT AAA AT-AGGGGCTTTTTTGTTGC TATTTCTTGACTTGT TERM 1327 1449822 - 1449861 + F 83 -11 -2.82773 | gap 1, opp_overlap 1449832, overlap 1449821 1449832 1449834 TCGTTTGTTTTTTTA AAGCAAAAAAGCCCCTTAT AAA AT-AGGGGCTTTTTTGTTG CTATTTCTTGACTTG TERM 1328 1449851 - 1449832 - f 100 -7.2 -5.37593 | gap 1, opp_overlap 1449832 1449822 1449821 1449834 TTTTAAAGCAAAAAA GCCCCTTAT AAA AT-AGGGGC TTTTTTGTTGCTATT TERM 1329 1449832 - 1449851 + F 100 -7.2 -5.54885 | gap 1, opp_overlap 1449832, overlap 1449822 1449821 1449834 TTTTAAAGCAAAAAA GCCCCTTAT AAA AT-AGGGGC TTTTTTGTTGCTATT TERM 1330 1449834 - 1449850 + F 72 -7.3 -3.90491 | opp_overlap 1449832, overlap 1449832 1449822 1449821 TTAAAGCAAAAAAGC CCCTTAT AAA ATAGGGG CTTTTTTGTTGCTAT TERM 1331 1450381 - 1450370 - g 85 -3 -5.80817 | TTTAAGAGAAAAAAA TCTT AAAG AAGA GCGTAGGCAAAAAGA HP1388 1450188 - 1450637 + | hypothetical protein TERM 1332 1450865 - 1450854 - g 72 -4.4 -4.67942 | opp_overlap 1450848 GGTAAGAAATCAAAA GCTT AACA AAGC ATTGGAATTGTGCAA HP1389 1450780 - 1450962 + | hypothetical protein HP1390 1451504 - 1451004 - | hypothetical protein TERM 1333 1451202 - 1451213 + g 76 -2.2 -5.38054 | TCTTACCATGCATGC GTCA TCTT TGGC TTTTTCTTTATCACG TERM 1334 1451606 - 1451624 + r 82 -7.6 -4.59489 | opp_overlap 1451606 1451601 ATAATAGTAAGTCAA CATAAAAA ATA TTTTTATG TTTATTGTTTAAATT TERM 1335 1451707 - 1451677 - R 77 -7.8 -4.06866 | GTATAAATATAATAA TTAAGTAAAACCTA CAT CAAGTTCTACTTAA ACCAAATTAAAAAAA HP1391 1452053 - 1451757 - | hypothetical protein HP1392 1453379 - 1452072 - | fibronectin/fibrinogen-binding protein TERM 1336 1452398 - 1452410 + g 73 -6.9 -4.21408 | ACAGCACTTCATACC CGCTC ATA GGGCG TTTGATTTTAGAATT TERM 1337 1452537 - 1452554 + g 89 -5.7 -5.36018 | opp_overlap 1452537 1452535 CTCTTCTTCTAAATA CAAAAAT TGCG ATTTTTG TTTCTTTTTTTTACT TERM 1338 1452564 - 1452578 + g 79 -3.6 -5.5112 | TTTTTGTTTCTTTTT TTTACT GAG AGTGAA TTTTTTATTGATAAA HP1393 1454950 - 1453376 - | DNA repair protein (recN) TERM 1339 1454261 - 1454281 + g 82 -6.1 -4.90266 | overlap 1454263 TAGCACCTCTAACGC CAGAGCGAT TTT ATCGTTCAG TTTTTCCTTACTAGA HP1394 1455819 - 1454965 - | hypothetical protein TERM 1340 1456179 - 1456201 + G 76 -3.4 -5.27335 | overlap 1456180 CTACTATCAAGGGGT TTGATGCGCT TTT AGGGTATCAG TTTTTCTTTGGGAAA HP1395 1456007 - 1456735 + | outer membrane protein (omp30) HP1396 1457644 - 1456778 - | hypothetical protein TERM 1341 1457179 - 1457167 - G 70 -7.7 -3.70546 | opp_overlap 1457167 CCACTAAAATGAGAA TGGGT TTG ACCCA TGAATTTTTTTTAGC HP1397 1458467 - 1457652 - | hypothetical protein TERM 1342 1457768 - 1457783 + g 70 -5.4 -4.3534 | CAAATTCTTCTCGCT CATGCT CTTT AGCGTG TTTTAATAATTCCCC HP1398 1459724 - 1458582 - | alanine dehydrogenase (ald) TERM 1343 1459601 - 1459614 + g 71 -6.7 -4.13767 | opp_overlap 1459595 1459594 TGCTATAACCGCTAT TAGCG CCGG CGCTA TTTTGAACTAAAACC TERM 1344 1460327 - 1460342 + G 70 -9 -3.13109 | opp_overlap 1460315, overlap 1460315 1460326 AAAGCATATCCACGG CATGCC TTTA GGCATG GTTTTAAATCGTGTC HP1399 1459926 - 1460894 + | arginase HP1400 1461431 - 1463959 + | iron(III) dicitrate transport protein (fecA) HP1401 1464755 - 1464048 - | hypothetical protein HP1402 1467736 - 1464755 - | type I restriction enzyme R protein (hsdR) TERM 1345 1464827 - 1464845 + g 100 -3.2 -6.20267 | overlap 1464828 ATCGTTTATGATTTT TCTTAAAG CGA TTTTAAGG TTTTTTTCTTTTTGA TERM 1346 1468293 - 1468304 + G 73 -5.8 -4.49344 | AGTTTTACACCCCTA GCGA AGTT TCGC TTTTATCGTCCCTTT TERM 1347 1469585 - 1469595 + G 74 -4 -5.02074 | GATTGGTTCCTTCTT TCAT TCA ATGA TTTTTTGAGCGCTAA TERM 1348 1469758 - 1469738 - g 71 -6.9 -4.01158 | AACCTGATCAAACAA CGCTTTTTT GAA AAAGAAGCG AAAGAATTAGAAGAA TERM 1349 1469944 - 1469925 - g 84 -2.2 -5.84432 | overlap 1469927 CAGAAGATAAAAAAA TCCTAAAA ACCG CTTTAGAA TTGCTAGAAGCTAAA HP1403 1467803 - 1470256 + | type I restriction enzyme M protein (hsdM) HP1404 1470253 - 1470543 + | type I restriction enzyme S protein (hsdS) HP1405 1470848 - 1470952 + | hypothetical protein HP1406 1471119 - 1471967 + | biotin synthase TERM 1350 1472436 - 1472452 + G 73 -2.1 -5.27779 | overlap 1472438 TAGTGTTTTTATTCG CTCTGCC TTT GGTGGTG TTTTTTGATATTAAG HP1407 1471967 - 1472845 + | putative ribonuclease N TERM 1351 1473729 - 1473681 - f 100 -14.9 -3.47349 | opp_overlap 1473681 1473682 1473686, overlap 1473682 1473687 TCTCTAAAGGCACAA GGAAAAGGGAGCTAAAGATAAAT CGC ATTTACCCTTAACTCCCCTTTCT CTTTATAGGGAGCTG TERM 1352 1473682 - 1473728 + F 80 -9.6 -3.52113 | opp_overlap 1473681 1473682 1473687, overlap 1473681 1473686 CTCTAAAGGCACAAG GAAAAGGGAGCTAAAGATAAAT CGC ATTTACCCTTAACTCCCCTTTC TCTTTATAGGGAGCT TERM 1353 1473728 - 1473682 - f 100 -18.4 -2.68088 | opp_overlap 1473682 1473681 1473686, overlap 1473681 1473687 CTCTAAAGGCACAAG GAAAAGGGAGCTAAAGATAAAT CGC ATTTACCCTTAACTCCCCTTTC TCTTTATAGGGAGCT TERM 1354 1473723 - 1473687 - f 100 -14.7 -4.50661 | opp_overlap 1473686 1473682 1473681, overlap 1473682 1473681 AAGGCACAAGGAAAA GGGAGCTAAAGATAAAT CGC ATTTACCCTTAACTCCC CTTTCTCTTTATAGG TERM 1355 1476291 - 1476303 + F 70 -6.2 -4.2354 | AGGTTCTATTTCACT CCGC TCACT GCGG TTCTTTTCACCTTTC TERM 1356 1476457 - 1476439 - f 73 -8.9 -2.80344 | overlap 1476438 CTGCTACCTAAGAAC GCCTTGT CGCAT ACAAGGC TATCACTTTCTATGG TERM 1357 1477079 - 1477093 + F 76 -7.2 -4.3208 | TTTACCAGTTGGTGG GCTTTA TAT TAAAGC TTTTAGCTTGTAGAA TERM 1358 1477313 - 1477288 - f 89 -7.8 -5.00616 | opp_overlap 1477292 1477308, overlap 1477292 1477304 1477308 TGGGGGGTTAAAAAA TAAAGCTTTA AATAAA TAAAGCTTTA AATAAATAAAGCTTT TERM 1359 1477309 - 1477292 - f 70 -4.2 -5.04249 | opp_overlap 1477292 1477308, overlap 1477288 1477304 1477308 GGGTTAAAAAATAAA GCTTTA AATAAA TAAAGC TTTAAATAAATAAAG TERM 1360 1477329 - 1477304 - f 82 -7.8 -4.4448 | opp_overlap 1477292 1477308 1477324, overlap 1477292 1477288 1477308 1477320 1477324 AAAGCTTTAAATAAA TAAAGCTTTA AATAAA TAAAGCTTTA AATAAATAAAGCTTT TERM 1361 1477345 - 1477320 - f 82 -7.8 -4.4448 | opp_overlap 1477308 1477324 1477340, overlap 1477308 1477304 1477324 1477336 1477340 AAAGCTTTAAATAAA TAAAGCTTTA AATAAA TAAAGCTTTA AATAAATAAAGCTTT TERM 1362 1477361 - 1477336 - f 82 -7.8 -4.4448 | opp_overlap 1477324 1477340 1477356, overlap 1477324 1477320 1477340 1477352 1477356 AAAGCTTTAAATAAA TAAAGCTTTA AATAAA TAAAGCTTTA AATAAATAAAGCTTT TERM 1363 1477377 - 1477352 - f 82 -7.8 -4.4448 | opp_overlap 1477340 1477356, overlap 1477340 1477336 1477356 1477374 AAAGCTTTAAATAAA TAAAGCTTTA AATAAA TAAAGCTTTA AGATAAATTAAGATA HP1408 1477542 - 1477877 + | hypothetical protein TERM 1364 1478998 - 1479010 + G 74 -6.3 -4.45723 | TACCCTGATTTTGAC GCTTT GAA AAAGC TTTTGGTGTCTTATT HP1409 1477927 - 1479663 + | hypothetical protein TERM 1365 1480374 - 1480384 + G 73 -5.4 -4.58395 | AAGCTAAACATGAGC GCAT TAA ATGC TTTTTCAAAGATAAA HP1410 1479704 - 1480888 + | hypothetical protein TERM 1366 1481135 - 1481124 - g 76 -4.4 -5.07652 | TGGCTCAAAATAAAA CGAA GCGA TTCG TTAAGGAGATCATTG TERM 1367 1481485 - 1481529 + G 87 -5.1 -5.4505 | opp_overlap 1481491 1481501, overlap 1481490 1481491 TAAACCCATTTTAAT CAAGGACTTCTTTAAAGGCAA TAA TTACCTTTATAGGAGGTTTTG TTTTTTATTGGGGAA TERM 1368 1481490 - 1481524 + G 83 -3.6 -5.55001 | opp_overlap 1481491 1481501, overlap 1481485 1481491 CCATTTTAATCAAGG ACTTCTTTAAAGGCAA TAA TTACCTTTATAGGAGG TTTTGTTTTTTATTG TERM 1369 1481491 - 1481523 + G 71 -7.1 -3.8934 | opp_overlap 1481491 1481501, overlap 1481490 1481485 CATTTTAATCAAGGA CTTCTTTAAAGGCAA TAA TTACCTTTATAGGAG GTTTTGTTTTTTATT TERM 1370 1482768 - 1482754 - g 70 -2.8 -5.06103 | overlap 1482743 AGAAGCGCTAAAAAA TGCG CAATTAT CGCA AATTGAAGAAATATT HP1411 1481000 - 1482859 + | hypothetical protein HP1412 1482975 - 1483901 + | hypothetical protein TERM 1371 1483903 - 1483927 + T 82 -9.9 -3.3215 | opp_overlap 1483903 1483904, overlap 1483901 1483899 1483920 GTAATGTAGAATAAA CCCCCCCCACT CCT AGTGGGGTGGC TCTCCTTTTTTTAAT TERM 1372 1483927 - 1483903 - T 93 -9.9 -4.35604 | opp_overlap 1483903 1483901 1483899 1483920, overlap 1483904 GTAATGTAGAATAAA CCCCCCCCACT CCT AGTGGGGTGGC TCTCCTTTTTTTAAT TERM 1373 1483926 - 1483904 - T 100 -13.4 -3.20639 | opp_overlap 1483903 1483901 1483899 1483920, overlap 1483903 TAATGTAGAATAAAC CCCCCCCACT CCT AGTGGGGTGG CTCTCCTTTTTTTAA TERM 1374 1483920 - 1483932 + T 75 -2.6 -5.62219 | opp_overlap 1483904 1483903, overlap 1483903 1483901 1483899 CCCCCCACTCCTAGT GGGG TGGCT CTCC TTTTTTTAATCTCTT HP1413 1484475 - 1484029 - | 7-cyano-7-deazaguanine reductase HP1414 1484535 - 1484876 + | hypothetical protein TERM 1375 1484907 - 1484923 + F 70 -6.5 -4.23794 | overlap 1484887 TTTAGGGCCTAGCGG GAGCGGT AAA AGCGCTC TTTCTATTGAATTAG miaA 1484977 - 1485777 + | tRNA delta(2)-isopentenylpyrophosphate transferase HP1416 1485782 - 1486885 + | lipopolysaccharide 1,2-glucosyltransferase (rfaJ) TERM 1376 1488312 - 1488326 + G 87 -8.6 -4.6575 | opp_overlap 1488311 CAGATGCTCTAAAGC GGGATT AGA AATCCC TTTTATGATTTATGT HP1417m 1486895 - 1488564 + | hypothetical protein murB 1489404 - 1488625 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1377 1488821 - 1488841 + g 81 -7.5 -4.57073 | CCCTCTAAAAGCCTG CCCGCATGA TCG TTAGGCGGG TTTTTGAAACAACTC fliQ 1489674 - 1489408 - | flagellar biosynthesis protein FliQ fliI 1490989 - 1489685 - | flagellum-specific ATP synthase TERM 1378 1490358 - 1490375 + g 70 -2.8 -5.04597 | ACCAACACGCAAGAG CTTAAA TCCCCT TTTAAG TTTTTCTCTATAAAT HP1421 1491904 - 1490990 - | conjugative transfer regulon protein (trbB) ileS 1494683 - 1491921 - | isoleucyl-tRNA synthetase TERM 1379 1492326 - 1492316 - G 76 -2.4 -5.40072 | TGGCTTGTAAAAAAA TGCG AAG CGCT TGGCTATGCTCTAAA TERM 1380 1492730 - 1492752 + g 70 -5.6 -4.33105 | opp_overlap 1492731 1492733 1492742, overlap 1492731 1492742 CTGTTTGAGTGAAAA AGGTTTGAGA GAC TCTCAAATCG TTTTGATAGTCATTA TERM 1381 1492751 - 1492731 - G 79 -6.9 -4.65895 | opp_overlap 1492730 1492731 1492742, overlap 1492733 1492742 TGTTTGAGTGAAAAA GGTTTGAGA GAC TCTCAAATC GTTTTGATAGTCATT TERM 1382 1492731 - 1492751 + g 70 -9.1 -3.1914 | opp_overlap 1492731 1492733 1492742, overlap 1492730 1492742 TGTTTGAGTGAAAAA GGTTTGAGA GAC TCTCAAATC GTTTTGATAGTCATT TERM 1383 1492996 - 1493006 + g 86 -8.2 -4.88736 | AAGATCACATCGCTA GGGC TTT GCCC TTTTTCTCCATGATA HP1423 1494962 - 1494708 - | hypothetical protein TERM 1384 1495268 - 1495244 - g 72 -3.5 -5.03145 | opp_overlap 1495265 1495265, overlap 1495258 1495265 GAAGCGCTTAAAAAA GATCCTAAAGC AAA GCTCAAAGACC CCAGGGGGCCTTTAT TERM 1385 1495353 - 1495368 + G 89 -6.8 -5.1963 | opp_overlap 1495342, overlap 1495354 CCAAGCCCCAATCGT TCAGGC TAGA GCCTGG TTTTTATTACTTGGA TERM 1386 1495354 - 1495367 + G 70 -8.1 -3.70694 | opp_overlap 1495342, overlap 1495353 CAAGCCCCAATCGTT CAGGC TAGA GCCTG GTTTTTATTACTTGG TERM 1387 1495551 - 1495571 + G 73 -8.3 -3.65071 | opp_overlap 1495551, overlap 1495549 TAAGCCTGATTAAAA CCCCTAGAG GCT TTTTAGGGG TGTTCTTGTTTGATA TERM 1388 1495666 - 1495648 - g 74 -5.2 -4.70879 | TTTAAAGCTTAAAAA CGCTTCCT TTA AAGATGCG TGGGGGTTGGAACAA HP1424 1495064 - 1495684 + | hypothetical protein HP1425 1496039 - 1495812 - | hypothetical protein HP1426 1496638 - 1496096 - | hypothetical protein TERM 1389 1496978 - 1496946 - R 78 -7 -4.35926 | ATTTTAAAGTCAAAA GCCAGAGACAACCC TAGTC AAGTTGCCCCTAGC CACACCGATATTACT HP1427 1497171 - 1496989 - | histidine-rich, metal binding polypeptide (hpn) HP1428 1498440 - 1497367 - | hypothetical protein TERM 1390 1497570 - 1497588 + g 72 -3.2 -5.0133 | overlap 1497572 CTTTGGATTTAATGC CGTTTAAA AGT TTTAAAAG TTTTTTAGCGCAGTC HP1429 1499426 - 1498437 - | polysialic acid capsule expression protein (kpsF) TERM 1391 1498712 - 1498724 + g 74 -4.8 -4.72386 | CATTGACTAAAATCG CGCT GCCTA AGCG TTTTTCACTCATTTC HP1430 1501479 - 1499410 - | ATP-binding protein TERM 1392 1501292 - 1501302 + g 80 -4.6 -5.31275 | TTTGGTTTTTTGTTA GGGC GAT GCTC TTTTTTATGGTGCGA TERM 1393 1501355 - 1501372 + g 80 -6.3 -4.67904 | TCTGCGTTTTTTTGC GCGTTTT CTCT GAAACGC TTTTTGCGGTTGGTG ksgA 1502332 - 1501517 - | dimethyladenosine transferase TERM 1394 1501624 - 1501644 + g 82 -4 -5.48303 | opp_overlap 1501624 CTAACACCTTATCAA GCTTTTCT CTATA AGAAACGC TTTTTTTAAGATTGT TERM 1395 1501749 - 1501775 + g 71 -3.8 -4.86731 | gap 2, opp_overlap 1501749 GCTTCTTCAAAAAAT GGCGCTTGGGCT AATGA AGCC-AA-CGCC TTTTCTTTCAGCGGC TERM 1396 1501879 - 1501867 - G 70 -3.3 -4.97158 | opp_overlap 1501867 GCACATCAAACAAAA GGGTA GCG TTCCC TATCGTGTGTGCTAA TERM 1397 1501907 - 1501897 - G 71 -6.8 -4.07568 | opp_overlap 1501897 TCGTGTGTGCTAAAA CGCT TAA AGCG TTCTGTGAATCTTTA TERM 1398 1502075 - 1502049 - G 74 -5.2 -4.69962 | opp_overlap 1502050, overlap 1502050 GAGATCAAAAAATAA GGCTCTTCTTCT TTT AAAAAAAGAGCG TCTTTTTCCACTAAT TERM 1399 1502074 - 1502050 - G 70 -8.7 -3.4035 | opp_overlap 1502050, overlap 1502049 AGATCAAAAAATAAG GCTCTTCTTCT TTT AAAAAAAGAGC GTCTTTTTCCACTAA TERM 1400 1502564 - 1502535 - H 79 -7.3 -4.46212 | opp_overlap 1502535 1502540 TTTTGCATTATAAAA TGAAATCCTAGCT AATG AGCTAGAATTTAA ATTTCAATTAAAGGA HP1432 1502586 - 1502804 + | histidine and glutamine-rich protein TERM 1401 1503241 - 1503264 + T 100 -11.8 -3.9941 | TTTTCTAAGAGCGTT CCCTTAAGCT TTTA AGCTTAGGGG TTTCCTTATGAAGCG HP1433 1506008 - 1503438 - | hypothetical protein TERM 1402 1503808 - 1503798 - G 73 -5.4 -4.56597 | TTCGCCTTTTAAAAA CTCT AAT AGAG CGTGGCTAGAATATC TERM 1403 1504384 - 1504434 + g 71 -7.6 -3.84017 | overlap 1504374 1504394 CTTTGGGAACACATC TTCCTATTAGGAGCGTTTATGTCT AAA AGGCAAAAACGCTCTTTCAAGGGA TTATCTTTCAAATTG TERM 1404 1504394 - 1504424 + g 95 -13.4 -3.56099 | overlap 1504384 ACATCTTCCTATTAG GAGCGTTTATGTCT AAA AGGCAAAAACGCTC TTTCAAGGGATTATC TERM 1405 1504498 - 1504515 + g 95 -11.3 -4.86731 | TCTTCTTTAGAGTTG CCCCCTA AATT TAGGGGG TTTTCTTTAGGAAGA TERM 1406 1504704 - 1504657 - G 100 -13 -4.11484 | opp_overlap 1504655 1504654, overlap 1504662 CTGAATTTTTTAAAA TTAGATCCTTGCAAGTTTTTCA AAGT TGAAAAACTTGCAAGGATAACA CCGTTTAATTCTTTG TERM 1407 1504699 - 1504662 - G 100 -21.7 -3.09823 | opp_overlap 1504655 1504654, overlap 1504657 TTTTTTAAAATTAGA TCCTTGCAAGTTTTTCA AAGT TGAAAAACTTGCAAGGA TAACACCGTTTAATT TERM 1408 1504807 - 1504817 + g 73 -6.8 -4.20769 | ATGAGATTGTCTCGT GCCA CTT TGGC TTTATGTTCGCCTGT TERM 1409 1505209 - 1505225 + g 76 -7.2 -4.18042 | TCTACCCAGATTTTA GGGGTG AAAAA CGCCCC TTTCCTTTCTCTCAC HP1434 1506998 - 1506117 - | formyltetrahydrofolate hydrolase (purU) HP1435 1507879 - 1507001 - | protease IV (PspA) TERM 1410 1507078 - 1507089 + g 76 -3.6 -5.24531 | opp_overlap 1507076 CTTTTTCAATGAAGC GCTC CATA GGGC TTTTTTCTAGCCAAT TERM 1411 1507641 - 1507656 + g 75 -5.4 -4.75063 | opp_overlap 1507641 ATCAAAAGCAAAACG CCCTTA ATGC TAGGGG TTTTTAGGATTTTAT TERM 1412 1507741 - 1507755 + g 76 -7 -4.42806 | opp_overlap 1507737, overlap 1507743 TAGCGAGATTAGGCG GGGCGC TTG GCGCGC TTTCTTTAGCGCTAA HP1436 1507950 - 1508198 + | hypothetical protein TERM 1413 1508249 - 1508271 + F 80 -5.7 -5.03715 | gap 1, overlap 1508251 1508252 TTGTAAATTTTACAC GCTCTTTTTG TTTG CAAAAAG-GC TTTTTTAGCGGTGGT HP1437 1508432 - 1509151 + | hypothetical protein TERM 1414 1509980 - 1509944 - g 70 -9 -3.25668 | gap 1 AAGTTACTGACAAGA TGATTAGCTCTGA-AGA AAAA TCTATCAAAGCCAATCA AGTCAAACTCACTGA HP1438 1509160 - 1510176 + | lipoprotein HP1439 1510188 - 1510433 + | hypothetical protein TERM 1415 1512811 - 1512791 - T 71 -5.5 -4.57514 | opp_overlap 1512795 1512795, overlap 1512795 1512807 ACAACAAAACAGAAA GAAACTTTT TAA AAAGGTTTC GCTAAACGCTAACCT HP1440 1513922 - 1513143 - | hypothetical protein HP1441 1514043 - 1514534 + | peptidyl-prolyl cis-trans isomerase B, cyclosporin-type rotamase (ppi) HP1442 1514554 - 1514784 + | carbon storage regulator HP1443 1514781 - 1515587 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase smpB 1515584 - 1516042 + | SsrA-binding protein HP1445 1516045 - 1516497 + | biopolymer transport protein (exbB) HP1446 1516508 - 1516909 + | biopolymer transport protein (exbD) rpmH 1516981 - 1517115 + | 50S ribosomal protein L34 HP1448 1517075 - 1517560 + | ribonuclease P, protein component (rnpA) HP1449 1517547 - 1517900 + | hypothetical protein TERM 1416 1519257 - 1519290 + G 93 -9.8 -5.08255 | overlap 1519250 GCTCAGAGTGGATCT TATGGATTCATGAT TTATCC ATCATGGATCCGTA TTTTATTTTACCGCT TERM 1417 1519528 - 1519517 - g 93 -5.8 -5.60689 | TTAGAGAATAAAAAA CGCA TGCA TGCG CAAAACAAAAAGGAA HP1450 1517906 - 1519549 + | putative inner membrane protein translocase component YidC TERM 1418 1519660 - 1519671 + GF 74 -5.8 -4.62872 | opp_overlap 1519659 GAAGTCATTCAAACG CCCT CTAA AGGG TTTTTAAGCATTGGT HP1451 1519549 - 1520343 + | hypothetical protein TERM 1419 1520756 - 1520740 - gf 82 -10.9 -2.73875 | overlap 1520737 1520742 CCTTTGTGAAGATGA GAGCGTT TTA AACGCTC TAGCCAGGCAGCTTA trmE 1520303 - 1521688 + | tRNA modification GTPase TrmE TERM 1420 1522012 - 1521994 - g 72 -8.8 -3.48276 | opp_overlap 1521977 1521994, overlap 1521978 GGCTTTTTTATAGAA GCCGGGTT TGA AACCGGGC TATTGCAAGGCACAC HP1453 1521892 - 1524132 + | hypothetical protein TERM 1421 1524275 - 1524286 + T 81 -4.4 -5.43414 | GCGTGTTTTCTTTAA GCTT ACTG AAGC TTTTTTCTATCTCAT TERM 1422 1524337 - 1524360 + T 79 -8.2 -4.08317 | opp_overlap 1524341, overlap 1524341 TTCTCCTTTCGCATT CAAACGCC CCTTTTTA GGCGTTTG TTTGGTTTAAAATTG TERM 1423 1524445 - 1524459 + T 80 -5.7 -5.0133 | opp_overlap 1524445 1524444, overlap 1524429 1524426 TTGGGGGTTTGAAAG CCCAA AGTCA TTGGG TTTTTTCAAACAATC TERM 1424 1524566 - 1524581 + T 77 -7.6 -4.12942 | GGTTCTTGTTCTGTG TCCCTA ATCA TAGGGA TTTTACAGAGTTTGA HP1454 1525860 - 1524949 - | hypothetical protein TERM 1425 1525146 - 1525156 + g 74 -4 -5.01811 | CATTAGCACTGTCTG TGAA AAC TTCA TTTTTGATTTGATAG TERM 1426 1525211 - 1525226 + g 79 -6.8 -4.55128 | opp_overlap 1525211, overlap 1525206 AGCACTCTGGCATAA GCGCTT ATGA GAGCGC TTTTGATTTCCGCAT TERM 1427 1525739 - 1525765 + g 77 -5.1 -4.92812 | opp_overlap 1525739, overlap 1525741 GAAGTGGCTGAACCA CTCCCATAAAG ATAGC CTTTTTGGGTG TTTGTTTTGTTGTAG HP1455 1526262 - 1525870 - | hypothetical protein HP1456 1526746 - 1526219 - | membrane-associated lipoprotein (lpp20) HP1457 1527402 - 1526770 - | hypothetical protein TERM 1428 1527705 - 1527684 - R 77 -10.2 -2.53995 | AGCTATTTGAAGTTA GCCCCTTT ATAAAA AAAGGGGC TAAAAAGATTCTGTG HP1458 1528086 - 1527772 - | thioredoxin HP1459 1528929 - 1528141 - | hypothetical protein dnaE 1532546 - 1528911 - | DNA polymerase III subunit alpha TERM 1429 1532349 - 1532366 + g 73 -2 -5.19212 | gap 1, overlap 1532343 CGCTTCCATGCCGAT GATAGGC TTAAT GCCT-TC TTTTTTCATGCTCGT HP1461 1532694 - 1533746 + | cytochrome c551 peroxidase HP1462 1534441 - 1533923 - | secreted protein involved in flagellar motility HP1463 1535206 - 1534529 - | hypothetical protein TERM 1430 1534821 - 1534811 - G 79 -5.4 -4.89567 | overlap 1534819 TTCTAAAAGAGAAAA CGAT AAA ATCG TAAAACGAACCGCAT TERM 1431 1534829 - 1534819 - G 75 -5.4 -4.70046 | overlap 1534811 GAGAAAACGATAAAA TCGT AAA ACGA ACCGCATAAGTGGGT HP1464 1536024 - 1535209 - | hypothetical protein HP1465 1536794 - 1536009 - | ABC transporter ATP-binding protein HP1466 1537927 - 1536794 - | hypothetical protein TERM 1432 1536870 - 1536858 - G 74 -4.8 -4.6951 | ATGATCCAAAACAAA GCGT TCACG ACGC TAATAGTGGTCAAGC HP1467 1538062 - 1538757 + | hypothetical protein HP1468 1539784 - 1538762 - | branched-chain amino acid aminotransferase TERM 1433 1539439 - 1539414 - G 70 -5.4 -4.32857 | opp_overlap 1539417 1539435, overlap 1539399 1539400 1539435 GGGCGCAAATACAAA CTCGCCCC GCTTTTATAA GGAGCGAG CCATTTTTGATTCGC HP1469 1540582 - 1539836 - | outer membrane protein (omp31) HP1470 1543375 - 1540697 - | DNA polymerase I (polA) TERM 1434 1542229 - 1542213 - G 82 -3.7 -5.46629 | overlap 1542215 AACATTTTAAAAAAA GCGTTTT GCA AAAACTC TAAAGAAAAGGGCGA TERM 1435 1542929 - 1542913 - G 80 -6.5 -4.72272 | overlap 1542915 TTTTGCCATCAAAAA GCGCGAT TTT ATCGCTC AAAAGCTGGTTAAAA HP1471 1544636 - 1543443 - | type IIS restriction enzyme R protein (BCGIB) TERM 1436 1544596 - 1544617 + g 81 -6.7 -4.78572 | TGCGTGTCATGGATT TTTATCGTG TTGG CATGATAAA TTTTCTTACTTGACA HP1472 1546741 - 1544702 - | type IIS restriction enzyme M protein (mod) TERM 1437 1545797 - 1545808 + g 75 -5.8 -4.66418 | CTTCAAACAGCTTTC GCCA TTAG TGGC TTTGTTGTTGTTTTC TERM 1438 1546399 - 1546381 - G 71 -6.8 -4.07568 | TCGTGTGGTGTAAAA TCGCATTA GCG TAATGCAA AGCCCCATTTAGGGC HP1473 1547347 - 1546772 - | hypothetical protein tdk 1547910 - 1547335 - | thymidylate kinase coaD 1548385 - 1547912 - | phosphopantetheine adenylyltransferase HP1476 1548948 - 1548385 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase flgA 1549614 - 1548958 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1439 1549282 - 1549293 + g 76 -4.4 -5.14965 | AGTGTTATTAGCGGT GATG TTTT CATC TTTTTTAATCGCGCT HP1478 1551659 - 1549611 - | DNA helicase II (uvrD) TERM 1440 1550673 - 1550690 + g 71 -7 -4.10552 | ATTTTCTAAATTCTC GCCCTT CTTTAA AAGGGC TTTGATTTGATAAGC HP1479 1554190 - 1551656 - | hypothetical protein TERM 1441 1552745 - 1552729 - G 73 -2.2 -5.25976 | opp_overlap 1552729 1552731, overlap 1552716 1552731 AATCAAAAAAAGAAA GGGCTT TTTTT AAGCGC TTGTTTTCTAACGCT TERM 1442 1552757 - 1552778 + g 74 -4.5 -4.8667 | gap 1, overlap 1552757 1552756 GCGCTTGTTTTCTAA CGC-TTTCAA CCC TTGAAGCGCG TTTTTATCCGCTATC TERM 1443 1554114 - 1554126 + g 72 -3.3 -5.02421 | overlap 1554114 1554114 ATTTTAGAATGAATG CCCTT TAG GGGGG TTTCTTTTTCGTTTT HP1480 1555447 - 1554200 - | seryl-tRNA synthetase HP1481 1556245 - 1555448 - | hypothetical protein TERM 1444 1555942 - 1555959 + g 70 -5.5 -4.42806 | overlap 1555957 GAATTAAGCGTTGTT GCGTGTA ATAC TTCACGC TTTCTTTAGAAATGA HP1482 1556509 - 1556249 - | hypothetical protein TERM 1445 1556421 - 1556447 + g 70 -3 -5.02231 | overlap 1556422 TCTAGGGAATGAACA TGCTCTTCAAAA CTT TTTTTAGGGGCG TTTTTAGTATTTTTA ubiE 1557259 - 1556519 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 1446 1557207 - 1557225 + g 95 -6.1 -5.5604 | TAAGAGCTGGCTATA TCATCAA ACATG TTGATGA TTTTTTCTTGCTTGA HP1484 1557732 - 1557286 - | hypothetical protein HP1485 1558315 - 1557743 - | hypothetical protein HP1486 1559432 - 1558302 - | hypothetical protein TERM 1447 1558890 - 1558875 - G 84 -6.8 -4.86613 | opp_overlap 1558875 CAAAATGAAAATAAA CACGCT AGAG AGCGCG TAATTCAAATACCCC HP1487 1560526 - 1559429 - | hypothetical protein TERM 1448 1559746 - 1559760 + g 72 -10 -2.72344 | opp_overlap 1559745 1559744 CCAACACCACAAACC CGCTCA TGA TGAGCG TCATTAAAACTACCG TERM 1449 1560211 - 1560191 - G 72 -4.7 -4.77567 | opp_overlap 1560191 AGCGTTATAATAAAA GGGCAAA TCTACCT TTCGCCC CATTTTGATTTTTTT HP1488 1561527 - 1560538 - | hypothetical protein HP1489 1563071 - 1561539 - | lipase-like protein TERM 1450 1562321 - 1562346 + g 75 -9.9 -3.43689 | opp_overlap 1562332 TTTGCCCCACTTTTT GCATTTTCAAA GCGT TTTGGAAATGC TTATAATGGCCTTTT TERM 1451 1562814 - 1562794 - G 79 -4.8 -5.08178 | gap 1, overlap 1562807 AGATACACATAAAAA GCGCTCAAA TCAA TTTGAG-GC AAAAAAGAAAGTTTA HP1490 1564417 - 1563068 - | hypothetical protein TERM 1452 1563101 - 1563112 + g 70 -5.8 -4.46212 | CTGATCTTGTTTAAC CGCT TTTA AGCG TTTTATCCTAGCCCC HP1491 1566122 - 1564521 - | phosphate permease TERM 1453 1565604 - 1565593 - G 73 -2.2 -5.26918 | overlap 1565603 ATACCGGATAAAAAA TGCC AATT GACA GCTACCATTCCAGCT HP1492 1566261 - 1566530 + | NifU-like protein TERM 1454 1566625 - 1566635 + G 73 -2.4 -5.26918 | overlap 1566614 AGCCCATTACGCTGA AGCG TTA CGCC TTTTTTCTGAAGTGT HP1493 1566542 - 1567153 + | hypothetical protein TERM 1455 1567513 - 1567498 - g 76 -4.6 -5.00851 | ACGAATCAAAGAAAA GGGCTT GACC ACGCCC ACCCTTTTAGAGCTT murE 1567157 - 1568500 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase HP1495 1568504 - 1569454 + | transaldolase TERM 1456 1569459 - 1569488 + F 73 -4.4 -5.07652 | overlap 1569474 GCAGTTTTTGATTTT TAAGGGTTTTTT GGATAG AATAAGCCCTTA TTTTATTTTAAAGGA HP1496 1569509 - 1570045 + | 50S ribosomal protein L25/general stress protein Ctc HP1497 1570055 - 1570615 + | peptidyl-tRNA hydrolase TERM 1457 1571002 - 1571019 + G 73 -5.5 -4.64844 | CACGGCTATTTATGT GGGGTTG AACG CGACTCC TTTTGTGTATATGGA TERM 1458 1571508 - 1571526 + G 77 -6 -4.57837 | overlap 1571502 TTTTTGTGCCGTTTT TAAGCGTT TTA ATCGCTTA TTTTTCGCCCAGTCT HP1498 1570670 - 1571737 + | hypothetical protein HP1499 1571852 - 1572670 + | hypothetical protein HP1500 1572906 - 1572835 - | hypothetical protein HP1501 1574234 - 1573068 - | outer membrane protein (omp32) TERM 1459 1574687 - 1574713 + G 78 -3 -5.50723 | TTCAAAAGATACTCA TGCTTAAAGTGA TCT TAGCGTTAAGCA TTTTTCTTTTGGTGC HP1502 1574413 - 1574850 + | hypothetical protein HP1503 1577213 - 1574847 - | cation-transporting ATPase, P-type (copA) TERM 1460 1575019 - 1575032 + g 93 -6.7 -5.40474 | TGATAGACTTTTTGA GCGTT ATCA AACGC TTTTTTTAGCAAACT TERM 1461 1575079 - 1575097 + g 90 -8.9 -5.0133 | AGCAAAATATCGCAT GCGCTTT TACTC AAAGCGC TTTTTTCAAACCCTA TERM 1462 1576722 - 1576698 - G 70 -2.7 -5.04385 | overlap 1576699 CATAGTGGCAAAAAA CCCCACGCTCA AAG TGAGCAAGTAG GAGCGCTGTTCTTTT TERM 1463 1576854 - 1576877 + g 76 -4.6 -5.00884 | gap 1 CACGATTTGCAAGTG GTGGGTGGTGA AAT TCA-CGCTCAC TTTTTTAACCCCACT HP1504 1577955 - 1577239 - | hypothetical protein TERM 1464 1577721 - 1577747 + g 74 -4.4 -4.88258 | opp_overlap 1577721, overlap 1577722 1577738 CGTTAGGGAATTTAA GGGCGTTTTTTT GGG AGCAAAACGCCA TTTTGTTATCCTTTT HP1505 1578971 - 1577937 - | riboflavin biosynthesis protein (ribG) TERM 1465 1578146 - 1578132 - G 76 -7.1 -4.14598 | TTCAATGAAATTAAA CCCCT TCTCT AGGGG TAAATCTTTGGGGTC TERM 1466 1578346 - 1578326 - G 77 -8.3 -3.85698 | opp_overlap 1578319 1578329, overlap 1578329 TGGTTTTCCCAGAAA CAATAAGCG TGT CGCATATTG CTCGCTGGTTGTGCG TERM 1467 1578359 - 1578373 + g 74 -4.2 -5.02074 | TTGCTCGCTGGTTGT GCGTGA AAA TAACGC TTTTTTGCCCGGTGA HP1506 1580194 - 1578968 - | glutamate permease (gltS) HP1507 1580322 - 1581479 + | hypothetical protein HP1508 1582865 - 1581489 - | ferrodoxin-like protein TERM 1468 1582365 - 1582339 - Gf 71 -3.8 -4.92239 | gap 1, overlap 1582340 CTAAAAAGCCAAAAA CCCATAGCAAT AGGGTG ATCGCTA-GGG TTTTTAAGATACATA TERM 1469 1583453 - 1583477 + GH 86 -5.7 -5.3236 | CGCTAGCATTCTAGG GGTAGGCACAG CGA CTGTTCTTATC TTTTTTGTGCCTTAT HP1509 1582845 - 1583633 + | putative glycerol-3-phosphate acyltransferase PlsY HP1510 1583630 - 1583983 + | hypothetical protein HP1511 1583967 - 1584293 + | hypothetical protein HP1512 1584447 - 1587080 + | iron-regulated outer membrane protein (frpB) TERM 1470 1588431 - 1588417 - g 79 -5.8 -4.86621 | AGCTTGAATGAAAAA GATTTT GAA AAAATC GCTCTGGTTTTAGAA HP1513 1587307 - 1588467 + | selenocysteine synthase nusA 1588569 - 1589756 + | transcription elongation factor NusA TERM 1471 1589997 - 1590018 + G 71 -3.8 -4.90525 | opp_overlap 1589997 TTGGGAAACATTATA CCTTAAAA TTAGTT TTTTAGGG TTTTGTTTGGAATTA HP1515 1589956 - 1590048 + | hypothetical protein TERM 1472 1590058 - 1590082 + T 74 -7.1 -4.15044 | opp_overlap 1590059, overlap 1590060 1590061 CGATAGTTTTTCAAG AGTCCCCCTTT TTT AAAGGGGGGTG TTTCTTAGACAAAGA TERM 1473 1590060 - 1590080 + T 95 -11.9 -3.6761 | opp_overlap 1590059, overlap 1590058 1590061 ATAGTTTTTCAAGAG TCCCCCTTT TTT AAAGGGGGG TGTTTCTTAGACAAA TERM 1474 1590061 - 1590079 + T 100 -13.2 -2.80244 | opp_overlap 1590059, overlap 1590060 1590058 TAGTTTTTCAAGAGT CCCCCTTT TTT AAAGGGGG GTGTTTCTTAGACAA HP1516 1590648 - 1590109 - | hypothetical protein HP1517 1594488 - 1590649 - | type IIS restriction enzyme R and M protein (ECO57IR) TERM 1475 1591325 - 1591313 - G 70 -7.7 -3.63744 | opp_overlap 1591313, overlap 1591311 TTCCCTCTTAAAATA GGCTT AAT AAGCC TCTCTGTGCGCTCCC TERM 1476 1591537 - 1591522 - G 85 -7.6 -4.85782 | opp_overlap 1591521 GTTGGCAAAAATAAA GCTTTC TGTT GAAAGC ACGTTTTGTTTCATC TERM 1477 1591617 - 1591634 + g 88 -9.1 -4.49958 | opp_overlap 1591616 CGTAATATTTAAATT CGCTCTC TTTA GAGGGCG TTTGTTTGATGAAAT TERM 1478 1592249 - 1592265 + g 74 -5.3 -4.67123 | overlap 1592251 AGTTCTAAATGCTCT TTTAAAA ATT TTTTAAA TTTTAATTCTTTTGG TERM 1479 1593644 - 1593630 - G 88 -8.6 -4.76478 | TAAAAGAAATTAAAA GGCTTT CTA AAAGCC GTAAAAACAAGATGC HP1518 1594777 - 1594490 - | hypothetical protein HP1519 1595660 - 1594908 - | hypothetical protein TERM 1480 1595202 - 1595215 + g 75 -2.5 -5.26918 | opp_overlap 1595194, overlap 1595197 AATACGATTACGATC TTTAT CGTT ATAAA TTTTTTCTGCAATAT HP1520 1597062 - 1595770 - | hypothetical protein TERM 1481 1596341 - 1596369 + g 72 -3.3 -5.06451 | opp_overlap 1596324 TTCAAACTATGGTTA GCTTTAAAAAA CCTGTTA TTTTCTAAAGC TTTTTTAAGATCATC TERM 1482 1596620 - 1596632 + g 78 -2.7 -5.52807 | overlap 1596621 AAACTTTTATTTTTT TCATT TTT AATGG TTTTTATTTCTTCTT HP1521 1600099 - 1597196 - | type III restriction enzyme R protein (res) TERM 1483 1599891 - 1599906 + g 74 -4.6 -4.88687 | AACGACTTGTCAATC CCCACG CTCC CCTGGG TTATTTTTTGTTTCG TERM 1484 1599962 - 1599952 - G 73 -5.4 -4.63932 | TATTTTCTAATAAAA GATC TTT GATC GCTCCTATTTCAAAA HP1523 1603959 - 1602088 - | DNA recombinase (recG) TERM 1485 1603662 - 1603652 - G 73 -6.8 -4.2679 | opp_overlap 1603652 TAAGCTTGATTAAAA GAGC TTT GCTC TAATTTACCATAAAT TERM 1486 1604282 - 1604270 - g 83 -4.9 -5.19998 | ATAACGAAAATAAAA TTGAT GAA ATCAA TAATGAAGAAAACGC HP1524 1604041 - 1604388 + | hypothetical protein TERM 1487 1604707 - 1604739 + G 73 -8.5 -3.77193 | ACTTATGGCTTTGGG GGGGATTTGATTGTG GAA TACAATAAAAACCCC TTGTATGTATTTTCT TERM 1488 1604977 - 1604989 + G 93 -7.7 -5.51046 | TTTGAATACGACTCA GCCTT TGT AAGGC TTTTTTCTGTCTTTA HP1525 1604392 - 1605027 + | hypothetical protein HP1526 1605776 - 1605024 - | exodeoxyribonuclease (lexA) HP1527 1607395 - 1605956 - | hypothetical protein TERM 1489 1606527 - 1606545 + gH 72 -3.1 -5.07652 | overlap 1606529 1606542 GAGATTTTAGTATAG GGGGTAA TGATT TTACCGC TTTTATTTTCAGCGG HP1528 1607394 - 1607471 + | hypothetical protein dnaA 1608997 - 1607624 - | chromosomal replication initiation protein TERM 1490 1609539 - 1609560 + G 74 -4.5 -4.87133 | gap 1 CATGGAGTTTTTTAG CGTTTTAAGC GTG GCT-AAAGCG TTTTCTTTAAAGGCT HP1530 1609150 - 1609692 + | purine nucleoside phosphorylase (punB) HP1531 1609735 - 1609974 + | hypothetical protein TERM 1491 1610389 - 1610378 - gf 72 -5.8 -4.35885 | ATTTATTAGAAGAAA CGCT TAAA AGCG AGAGCGATTTATTGA TERM 1492 1610421 - 1610407 - gf 70 -7.2 -3.66999 | AGCGATTTATTGAAA GCTTTT GAA AAAAGC ATCAGCCTTTTAAAA HP1532 1609975 - 1611768 + | D-fructose-6-phosphate amidotransferase thyX 1611722 - 1612417 + | FAD-dependent thymidylate synthase TERM 1493 1612675 - 1612698 + T 83 -8.2 -4.19735 | TTTTCTAAGAGCGTT CCCTTAAGTT TAAA AGCTTAGGGG TTTCCTTTTCAAGGG TERM 1494 1612819 - 1612761 - T 90 -12.6 -2.80077 | TTGTTATAAAATTTA TTTTTTTAAGGGGATAGGGGGGCATTTT GCG ATAACACCCCCTTAACCCCCTTAAAAAA CCCCCTAACCCCCTA TERM 1495 1612916 - 1612942 + T 74 -3.2 -5.40474 | overlap 1612892 CTTTTTAGCATTTTT TAGGTTTTAT TTTTGTT ATAAAACTTA TTTTTTTAAAACCCT TERM 1496 1612992 - 1613015 + T 88 -6.6 -5.20534 | opp_overlap 1612990 1612993 1612998, overlap 1612993 ATACATTAGTGAATT ACCCAACCGC TAAA GCGATTGGGC TTTTTCTTGCTTCAT TERM 1497 1612993 - 1613014 + T 86 -10.1 -3.70694 | opp_overlap 1612993 1612990 1612998, overlap 1612992 TACATTAGTGAATTA CCCAACCGC TAAA GCGATTGGG CTTTTTCTTGCTTCA TERM 1498 1613014 - 1612993 - T 89 -12.3 -2.7674 | opp_overlap 1612992 1612993, overlap 1612990 1612998 TACATTAGTGAATTA CCCAACCGC TAAA GCGATTGGG CTTTTTCTTGCTTCA HP1534 1614284 - 1613001 - | IS605 transposase (tnpB) TERM 1499 1614479 - 1614455 - g 76 -2.3 -5.51046 | gap 1, opp_overlap 1614455 TAAATACAGAAAAAA GTTGTTGCAA GGGGAT TTG-AACAAC TTTATTAAGTCTGTT HP1535 1614354 - 1614782 + | IS605 transposase (tnpA) HP1536 1614895 - 1614839 - | hypothetical protein HP1537 1615030 - 1615716 + | hypothetical protein TERM 1500 1615787 - 1615801 + T 72 -5 -4.87389 | CCCATTTATCTATTT CTTGTA GAA TACGAG TTTATTTTTAGCGTA fbcH 1616735 - 1615878 - | ubiquinol cytochrome c oxidoreductase, cytochrome c1 TERM 1501 1616552 - 1616564 + g 70 -7.7 -3.72051 | AAGCGGTGCAATTTT CAGCT ACA AGCTG TTTGCCCTTATTAGC HP1539 1617970 - 1616732 - | ubiquinol cytochrome c oxidoreductase, cytochrome b subunit (fbcH) TERM 1502 1617046 - 1617035 - G 73 -2.2 -5.27938 | AGCGCTAAAGAAAAA GCCT CTTA AGAC TTCATAGCTCCATAA HP1540 1618484 - 1617981 - | ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit (fbcF) TERM 1503 1618136 - 1618148 + g 76 -3.3 -5.19251 | GCCCCCCATGGCATG GGCAT AAA AAGCC TTTTTCTTCATCTTG HP1541 1621608 - 1618609 - | transcription-repair coupling factor (trcF) TERM 1504 1621148 - 1621130 - G 93 -7.4 -5.40072 | opp_overlap 1621129 TCGGTGTCAAAAAAA CTCAAGCG ATA CGCTTTAG AATTTGGCGCATAAA HP1542 1622022 - 1621612 - | hypothetical protein HP1543 1622879 - 1621941 - | toxR-activated gene (tagE) TERM 1505 1622134 - 1622113 - GR 76 -4.5 -5.08824 | gap 1 GGTTGATCTAAAAAA CGCACTT-CA TAA TGCAAATGCG GCCCTGTGCTCATCC HP1544 1623814 - 1622888 - | toxR-activated gene (tagE) HP1545 1624998 - 1623814 - | folylpolyglutamate synthase (folC) TERM 1506 1624239 - 1624251 + g 75 -7.7 -4.08692 | opp_overlap 1624239, overlap 1624221 TATTGCATGGCAAAA GCGTT TCA AACGC TTTTAGAGCCACTTC TERM 1507 1624251 - 1624239 - G 77 -7.7 -4.14243 | opp_overlap 1624221 1624239 TATTGCATGGCAAAA GCGTT TCA AACGC TTTTAGAGCCACTTC TERM 1508 1624682 - 1624697 + g 71 -7.6 -3.85698 | TGTAATTGCTGGTGG GCGTTT TCTA AAACGC TTTCTCCAACAACAG HP1546 1625500 - 1624988 - | hypothetical protein leuS 1627917 - 1625497 - | leucyl-tRNA synthetase HP1548 1628265 - 1627927 - | hypothetical protein TERM 1509 1627998 - 1627982 - G 70 -8 -3.73816 | opp_overlap 1627950, overlap 1627950 AAGATGAGACTGAAA GCGTTG CTAAT CAACGC CCCGATCATGAGCAT secF 1629246 - 1628275 - | preprotein translocase subunit SecF TERM 1510 1628641 - 1628625 - G 79 -6.7 -4.57569 | opp_overlap 1628628 TGATCCTGTCAAAAA TAATGAT CGT ATCATTA ATGGAATACCCAATC secD 1630832 - 1629255 - | preprotein translocase subunit SecD yajC 1631212 - 1630829 - | preprotein translocase subunit YajC HP1552 1632576 - 1631260 - | Na+/H+ antiporter (nhaA) TERM 1511 1632420 - 1632395 - G 72 -3.3 -5.16237 | gap 1, overlap 1632396 AAGCCGATGAAAAAA TCCCCTATTTGA AAC CCAAA-AGGGGT GTGCCATAGTGCAAA HP1553 1635437 - 1632600 - | helicase TERM 1512 1632833 - 1632823 - G 76 -2.4 -5.4505 | opp_overlap 1632823 1632828 CCTTGGAATAAAAAA GCCG CTT CGCC CTTTAAGGGCAAATT TERM 1513 1632828 - 1632846 + g 81 -7.4 -4.56775 | opp_overlap 1632823, overlap 1632823 GAATAAAAAAGCCGC TTCGCCCT TTA AGGGCAAA TTTTTAAAAAGAGCT TERM 1514 1633558 - 1633568 + g 71 -4 -4.84359 | GAAGAAGCGATCGCT TTAG TCT CTAA TTTTTCTAAAAATCC TERM 1515 1634828 - 1634865 + g 74 -4.3 -5.00616 | gap 1 CCTTTTCATCAAATG CAGGCTCTTTTTTATTAG GAT CAAATA-AATAGAGCTTG TTTTTTAAAAAACGC TERM 1516 1634919 - 1634958 + g 75 -10.2 -3.0806 | gap 1, opp_overlap 1634920 1634925 TGTGTAACTATCATA ACTT-AAGCATTGAGCGAT AAA AACGCTCAATGCTTCAAGC TGTTCGCCATTTAAA TERM 1517 1634957 - 1634920 - G 95 -13.7 -3.47227 | gap 1, opp_overlap 1634919, overlap 1634925 GTGTAACTATCATAA CTT-AAGCATTGAGCGAT AAA AACGCTCAATGCTTCAAG CTGTTCGCCATTTAA TERM 1518 1634951 - 1634925 - G 93 -13.8 -3.2534 | opp_overlap 1634919, overlap 1634920 ACTATCATAACTTAA GCATTGAGCGAT AAA AACGCTCAATGC TTCAAGCTGTTCGCC TERM 1519 1635777 - 1635759 - g 71 -6.1 -4.19238 | GTTGGAACCCTAAAA CCAAAAA ATTCA TTTTTGG CGTTAGGAAAAATAT rpsB 1635686 - 1636480 + | 30S ribosomal protein S2 TERM 1520 1636525 - 1636513 - g 79 -4.9 -5.12617 | CAATTAGTCAAAAAA TTAAG GGA CTTAA CCGATGCGGGCATGA TERM 1521 1636571 - 1636555 - g 70 -3 -5.05782 | gap 1 ATGGATTGCAAAAAA GCC-CTT GTAG AAGTGGC TGGGGATTTGCAAAA TERM 1522 1636626 - 1636612 - g 73 -5.7 -4.56597 | TTCTTGCGCGAAAAA GGCTT GAGTA AAGCC GCTAAAAAAGCCGAT tsf 1636480 - 1637547 + | elongation factor Ts HP1556 1639843 - 1637996 - | cell division protein (ftsI) TERM 1523 1639723 - 1639710 - G 87 -5.3 -5.40072 | overlap 1639712 GCTTGGGCAAAAAAA GCTTT TTTA AAAGC CACCATTAAAAAAAT fliE 1640328 - 1639999 - | flagellar hook-basal body protein FliE TERM 1524 1640055 - 1640075 + g 73 -8.3 -3.72363 | overlap 1640053 1640058 CTTTGTTGCGCACCT CAAGCATGA GTT TCATGCTCG TTTCAGCTTTCCCTA flgC 1640941 - 1640456 - | flagellar basal body rod protein FlgC flgB 1641376 - 1640954 - | flagellar basal body rod protein FlgB TERM 1525 1642684 - 1642698 + G 72 -8.6 -3.53722 | GAGCTATGGAGGGAG TTCGCT TCT AGCGAA TTGTATCGCTATAGG HP1560 1641584 - 1642750 + | cell division protein (ftsW) HP1561 1643781 - 1642774 - | iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) TERM 1526 1642834 - 1642821 - G 70 -3.1 -5.00138 | overlap 1642814 CATTCAAATCAAAAA CCACT TTAT AGTAG TCTTTAACCATCGCA TERM 1527 1643768 - 1643756 - G 71 -6.3 -4.26832 | GAATAAGAAATGAAA GCTTT TTT AAAGC GAGTAACTAACATAG TERM 1528 1643952 - 1643970 + r 73 -4.5 -5.055 | opp_overlap 1643952 AGCGCGATACACAAA GGGCTAA AAATA TCAGCCC TTTTTTAAAAATTAA TERM 1529 1643970 - 1643952 - R 71 -6.7 -4.128 | opp_overlap 1643952 AGCGCGATACACAAA GGGCTAA AAATA TCAGCCC TTTTTTAAAAATTAA HP1562 1644983 - 1643982 - | iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) TERM 1530 1644042 - 1644029 - G 70 -3.1 -5.00138 | overlap 1644022 CATTCAAATCAAAAA CCACT TTAT AGTAG TCTTTAACAATCGCA HP1563 1645224 - 1645820 + | alkyl hydroperoxide reductase (tsaA) TERM 1531 1645834 - 1645863 + F 89 -11.7 -3.32572 | overlap 1645831 1645832 AATCGGCTTAATTCT TTTAACCAAGAGA GTTC TTTCTTGGTTAAA TCCTTTCTTTTTGAT HP1564 1645960 - 1646775 + | outer membrane protein HP1565 1649034 - 1647268 - | penicillin-binding protein 2 (pbp2) TERM 1532 1647738 - 1647728 - G 74 -4.6 -5.00616 | GGCGTGGCTAAAAAA GAGC CTT GCCC AATAGCGGTAATGAG TERM 1533 1648565 - 1648585 + g 74 -9.1 -3.48276 | opp_overlap 1648565 1648583 ACATGCGAAGCTAAA GCGTTATTA GGG TAGTAACGC TTGTCTAAGGGAAGC HP1566 1649458 - 1649015 - | hypothetical protein TERM 1534 1649360 - 1649348 - G 93 -7.7 -5.40014 | AAACAAGAATAAAAA CCCAA TCA TTGGG GGTAAAAAAGGCATT HP1567 1650097 - 1649471 - | GTPase EngB TERM 1535 1649864 - 1649876 + g 70 -2.6 -5.10033 | opp_overlap 1649856 1649851, overlap 1649854 AATCACATTAAAGGT TGCC CTTAA GGCG TTTTCTTTATCTTCC HP1568 1650645 - 1650094 - | hypothetical protein HP1569 1651238 - 1650645 - | hypothetical protein HP1570 1651707 - 1651213 - | hypothetical protein HP1571 1652651 - 1651704 - | rare lipoprotein A (rlpA) HP1572 1653769 - 1652651 - | regulatory protein DniR HP1573 1654621 - 1653857 - | hypothetical protein TERM 1536 1655036 - 1655053 + G 75 -5.5 -4.80959 | TGGATTTTTTCATCA GCGCTTC TGAA GAAACGC TTTTATTGTGCGTTG TERM 1537 1655266 - 1655255 - g 78 -3 -5.42259 | CTATTTTGAAAAAAA CAAA AGGG TTTG AAAAAAATTTCTCTT HP1574 1654696 - 1655316 + | riboflavin synthase subunit alpha TERM 1538 1655376 - 1655357 - g 70 -9.3 -3.23393 | overlap 1655355 CTCTAGCCTATAACA TGGGGCA AGATCA TGCCCCA AAAGTGATCGCAAGC HP1575 1655317 - 1655589 + | ABC transporter, putative HP1576 1655611 - 1656594 + | ABC transporter ATP-binding protein HP1577 1656596 - 1657243 + | ABC transporter, permease protein (yaeE) TERM 1539 1657281 - 1657312 + T 80 -5.4 -5.24551 | opp_overlap 1657281 1657282, overlap 1657282 TCCAACAAATTAGAA CTTTTTTTGAAAAA AATT TTTTTGAAAGAAAG TTTTTATTGGTTTAG TERM 1540 1657282 - 1657296 + T 81 -4.4 -5.40072 | opp_overlap 1657281 1657282, overlap 1657281 CCAACAAATTAGAAC TTTTTT TGA AAAAAA TTTTTTTGAAAGAAA HP1578 1658393 - 1657275 - | LPS biosynthesis protein HP1579 1658870 - 1658442 - | hypothetical protein TERM 1541 1658505 - 1658529 + g 70 -2.9 -5.06451 | overlap 1658507 TTGCGTTATCGCTCC CTCTAAAATTT CAA AATTTTTAGCG TTTTTTGGGGTAATG TERM 1542 1658760 - 1658797 + g 72 -9.4 -2.99609 | opp_overlap 1658759 1658760 1658779, overlap 1658758 1658766 GATCGTAGTCAAAAC TTCTTGGGCTTTCAAA AAAGCC TTTGAAAGCTCAACAA TGATTTCATAATGTT HP1580 1659542 - 1658880 - | hypothetical protein HP1581 1660483 - 1659473 - | methicillin resistance protein (llm) TERM 1543 1660290 - 1660277 - GH 91 -2.3 -6.12458 | overlap 1660278 CAAAAAAACAAAAAA CCCCT TAAA AGGTG CTTCAAAAGGCTCAA TERM 1544 1660343 - 1660359 + gH 80 -9.3 -3.69395 | opp_overlap 1660337 1660336 AAGAAAGATCCCAAG CCCCCCG GCT CGTGGGG TTCTTGCATGATGAA TERM 1545 1661379 - 1661363 - g 71 -3.7 -4.91109 | GTGGGATTAGAAAAA GCGATTT TAG AAATGGC GCAACTCATTAAGCG HP1582 1660610 - 1661398 + | pyridoxal phosphate biosynthetic protein PdxJ pdxA 1661400 - 1662323 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1546 1663004 - 1663016 + G 72 -4.7 -4.77757 | opp_overlap 1663002 1663004 TCCCTTTAAAAAACA GCCCG AAT CTGGC TTTTAGTTTTTCAGG HP1584 1662388 - 1663410 + | O-sialoglycoprotein endopeptidase flgG 1663590 - 1664378 + | flagellar basal body rod protein FlgG HP1586 1664450 - 1664788 + | hypothetical protein HP1587 1665344 - 1664877 - | hypothetical protein TERM 1547 1665849 - 1665865 + r 76 -3.7 -5.41746 | TAGCGTTGCATTGAT TAGCC TGGTTTT GGCTA TTTTTTTGACAACTT TERM 1548 1665875 - 1665886 + r 70 -4.4 -4.77757 | TGGCTATTTTTTTGA CAAC TTTC GTTG TTTTGGTTTTTAGCA TERM 1549 1665972 - 1665995 + r 83 -9.6 -3.83323 | opp_overlap 1665973, overlap 1665973 TAAATTAAAATAAAA ACTAGATGCG TTTT CGCATCTAGA TTTCCATTCTATACC TERM 1550 1665973 - 1665994 + r 100 -13.1 -2.89511 | opp_overlap 1665973, overlap 1665972 AAATTAAAATAAAAA CTAGATGCG TTTT CGCATCTAG ATTTCCATTCTATAC TERM 1551 1665994 - 1665973 - R 100 -13.1 -5.56372 | opp_overlap 1665973 1665972 AAATTAAAATAAAAA CTAGATGCG TTTT CGCATCTAG ATTTCCATTCTATAC HP1588 1666790 - 1666029 - | hypothetical protein TERM 1552 1667021 - 1666998 - R 74 -3.8 -5.27023 | ACGCTAAAAATAAAA CCCAGACATT TTAT AGCATCTGGG TTTATATTGTATTTT HP1589 1667680 - 1667057 - | hypothetical protein HP1590 1667800 - 1667681 - | hypothetical protein