TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.75808 %AT, 963699 nt, 5913 terms. Intergenic: 0.769103 %AT, H2T: 209888 nt, 1693 terms; T2T: 58002 nt, 1165 terms; H2H: 38196 nt, 725 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|127763381|ref|NC_005364.2| Mycoplasma mycoides subsp. mycoides SC str. PG1, complete genome (length 1211703) dnaA 1 - 1440 + | chromosomal replication initiator protein DnaA dnaN 1602 - 2729 + | DNA polymerase III, beta chain TERM 1 2730 - 2742 + F 100 -7.7 -5.61881 | opp_overlap 2729 TTTTTATCAAATTAG TCCAC TTA GTGGA TTTTTATTTTTAAAA MSC_0003 2766 - 3299 + | primase-related protein TERM 2 3402 - 3388 - g 70 -2.9 -5.52079 | AGATCAAAACAAAAA TCAAT TAATT ATTGA AATTGGTCCAGGAAA ksgA 3299 - 4099 + | dimethyladenosine transferase MSC_0005 4156 - 5247 + | putative purine NTPase TERM 3 5464 - 5489 + F 100 -11.3 -5.24291 | AAAAACTTTCTAATG CCCTATGTCAA GCAA TTGATATAGGG TTTTATTTTGCTTTT TERM 4 6757 - 6747 - g 71 -5.4 -4.62471 | GTTAATGCTCAAAAA GCAA GAA TTGC AGCTCAAAAAGCAAG gyrB 5607 - 7511 + | DNA gyrase subunit B gyrA 7527 - 10031 + | DNA gyrase subunit A TERM 5 10069 - 10036 - T 93 -9.9 -3.84363 | gap 1, opp_overlap 10040 10047, overlap 10047 AAGAAGATTAAAATA TAACAAAAAAATCGGG GTC CCCGA-TTTTTTATTA TTAAATTTATATCTA TERM 6 10040 - 10066 + T 95 -11 -3.80622 | opp_overlap 10036 10047, overlap 10047 AGATTAAAATATAAC AAAAAAATCGGG GTC CCCGATTTTTTA TTATTAAATTTATAT TERM 7 10047 - 10059 + T 100 -9.1 -5.64873 | opp_overlap 10036 10047, overlap 10040 AATATAACAAAAAAA TCGGG GTC CCCGA TTTTTTATTATTAAA TERM 8 10059 - 10047 - T 100 -9.1 -5.94214 | opp_overlap 10047 10040, overlap 10036 AATATAACAAAAAAA TCGGG GTC CCCGA TTTTTTATTATTAAA rbsC-2 11059 - 10082 - | ribose/galactose ABC transporter permease rbsC-1 13626 - 11059 - | ribose/galactose ABC transporter permease TERM 9 12419 - 12440 + g 70 -2.5 -5.52909 | gap 1, opp_overlap 12432, overlap 12432 ACTTCTTGTTTGTAG TCTTTTGTAA AAA TTA-AAAAGA TTTTTTTAAGTCTTA TERM 10 12705 - 12683 - G 70 -7.8 -3.44325 | opp_overlap 12683 12682 ATTGCTCATAACCAA CCAATAGCAA TGA TTCCTATTGG ATTATTAAATGCAAC TERM 11 13091 - 13073 - G 70 -4.6 -5.08088 | AATCCTGAAGAAAAA TCTTTGTA TTT TCCAAAGA ATCATTTAAAGATAT rbsA 15232 - 13616 - | ribose/galactose ABC transporter ATP-binding protein rbsB 16887 - 15235 - | ribose/galactose ABC transporter substrate-binding protein TERM 12 15503 - 15519 + g 85 -8.1 -4.59853 | AAATTAGCAGCATTT GTTAATG AAC CATTAAC TTTTTCAACACTTCA TERM 13 17057 - 17073 + r 100 -9.5 -5.72254 | opp_overlap 17057 AAAAGATCAAAAAAA TCTCAGA AAT TCTGAGA TTTTTTATTCTTTGA TERM 14 17073 - 17057 - R 100 -9.5 -5.69023 | opp_overlap 17057 AAAAGATCAAAAAAA TCTCAGA AAT TCTGAGA TTTTTTATTCTTTGA metS 18607 - 17078 - | methionyl-tRNA synthetase TERM 15 18627 - 18645 + H 73 -3.2 -5.53079 | opp_overlap 18627 TAGTCCCTTCATAAG TATTATTG TAT CAAGAATA TTTTTTATATATTTT lpp 18811 - 20457 + | prolipoprotein TERM 16 21447 - 21436 - g 73 -3 -5.72622 | TTTATAAAGAAAAAA TAAC AGCA GTTA AATATGATGATTACA p72 20490 - 22088 + | immunodominant protein P72 precursor TERM 17 22159 - 22203 + T 93 -7.3 -5.64321 | opp_overlap 22160 22163 22165, overlap 22160 22165 AAATTTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 18 22160 - 22202 + T 95 -10.8 -3.94933 | opp_overlap 22160 22163 22165, overlap 22159 22165 AATTTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 19 22165 - 22197 + T 100 -10.7 -4.88326 | opp_overlap 22165 22163 22160, overlap 22160 22159 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT tnpB 23001 - 22141 - | IS1296SQ transposase protein B tnpA 23552 - 23010 - | IS1296SQ transposase protein A mtlD 24614 - 23628 - | mannitol-1-phosphate 5-dehydrogenase TERM 20 24133 - 24156 + g 100 -9.8 -5.14163 | opp_overlap 24146 AAATAATAATCTTCA CATTCTAAAT AATC ATTTAGAATG TTTTTATTACTAACT MSC_0018 25412 - 24615 - | RpiR family transcriptional regulator EIIA-mtl 25874 - 25446 - | PTS system, mannitol-permease IIA component TERM 21 25665 - 25651 - G 71 -7.2 -3.89734 | ATAACAACGATTAAA GAGTTT TTT AAACTC AACATACCCTCATAA srlD 26632 - 25874 - | sorbitol-6-phosphate dehydrogenase TERM 22 26569 - 26548 - G 70 -6 -4.23379 | AATCTAAAACAACAA CTTGATAA TTATTT TTATCAAG ACCAAGTGCTAGAAA EIIBC-mtl 28194 - 26632 - | PTS system, mannitol-permease IIBC component TERM 23 26928 - 26941 + g 73 -2.5 -5.80727 | AAACAACAATTTTTT TAATA TCGT TATTA TTTTTTATTGTTTTT TERM 24 28234 - 28255 + r 70 -4.6 -4.96848 | opp_overlap 28234, overlap 28227 AACTCAGGTTGTAAA TATTTACA ATATGC TGTAAATA TTTTTATATCGGCAA TERM 25 28300 - 28288 - R 87 -6.2 -5.65927 | opp_overlap 28288 28295 TATTCAAATAAAAAA GCGC TTTTG GCGC TGCTATTATATTTTT MSC_0022 28705 - 28445 - | hypothetical protein TERM 26 28638 - 28618 - GR 100 -9.9 -4.37734 | opp_overlap 28617 28616 28612 28620 CACAATAATTTAAAA TATCTTCTT CTA AAGAAGATA AATTCATATTTTCTA recG 29286 - 28675 - | DNA recombinase recG MSC_0024 29824 - 29333 - | hypothetical protein TERM 27 30057 - 30042 - R 83 -7.6 -4.61873 | opp_overlap 30041 TGTGATAAACTAAAA TTGCTG GCAA CAGCAA ACTTTGATATTAATC TERM 28 30161 - 30123 - R 100 -13.3 -3.76224 | opp_overlap 30126 30134, overlap 30125 30126 30134 GTCTGATTTATTAAA CATGCAAAAAAGCTGCC CTTAT GGCAGCTTTTTTGCTTT ATATTATTTTATTAA TERM 29 30159 - 30125 - R 100 -15.9 -3.46647 | opp_overlap 30126 30134, overlap 30123 30126 30134 CTGATTTATTAAACA TGCAAAAAAGCTGCC CTTAT GGCAGCTTTTTTGCT TTATATTATTTTATT TERM 30 30158 - 30126 - R 100 -19.4 -2.67667 | opp_overlap 30126 30134, overlap 30125 30123 30134 TGATTTATTAAACAT GCAAAAAAGCTGCC CTTAT GGCAGCTTTTTTGC TTTATATTATTTTAT TERM 31 30126 - 30158 + r 100 -19.4 -4.46609 | opp_overlap 30125 30123 30126 30134, overlap 30134 TGATTTATTAAACAT GCAAAAAAGCTGCC CTTAT GGCAGCTTTTTTGC TTTATATTATTTTAT TERM 32 30150 - 30134 - R 100 -9.4 -5.18561 | opp_overlap 30134 30126, overlap 30126 30125 30123 TAAACATGCAAAAAA GCTGCC CTTAT GGCAGC TTTTTTGCTTTATAT TERM 33 30134 - 30150 + r 100 -9.4 -5.4387 | opp_overlap 30126 30125 30123 30134, overlap 30126 TAAACATGCAAAAAA GCTGCC CTTAT GGCAGC TTTTTTGCTTTATAT rpsR 30405 - 30178 - | 30S ribosomal protein S18 TERM 34 30361 - 30380 + g 83 -3.7 -5.88061 | overlap 30353 AATATTGTTTTTTTG GAAAAAA TTAACT TTTTTTC TTTTTTTAATTTTTT ssb 30865 - 30425 - | single-strand binding protein rpsF 31290 - 30877 - | 30S ribosomal protein S6 TERM 35 31454 - 31472 + r 82 -9 -4.04141 | opp_overlap 31454 TTAGAAAATAAAAAA TATCAGAT ACT ATCTGATA TTTAATTAATTATTA TERM 36 31472 - 31454 - R 100 -9 -5.86976 | opp_overlap 31454 TTAGAAAATAAAAAA TATCAGAT ACT ATCTGATA TTTAATTAATTATTA csp 31705 - 31496 - | cold shock protein TERM 37 31933 - 31916 - g 71 -5.5 -4.56597 | overlap 31919 TTCTTGTTTTAAAAA CAACTGC TCAA GCAGATG AAGTATCTAATTCTG acpD 31891 - 32490 + | Acyl carrier protein phosphodiesterase abc 33561 - 32527 - | ABC transporter ATP-binding protein hsp33 34484 - 33609 - | HEAT shock protein (33 kDa chaperonin) TERM 38 33734 - 33704 - G 89 -10 -3.63991 | opp_overlap 33689 33706, overlap 33706 TATTATCTTTAATAA TATCTTTTAAATCA TTT TGATTTAAAAGATT TAATGTTGATAAAAC TERM 39 33732 - 33706 - G 95 -12.6 -3.39784 | opp_overlap 33706, overlap 33704 TTATCTTTAATAATA TCTTTTAAATCA TTT TGATTTAAAAGA TTTAATGTTGATAAA TERM 40 33706 - 33732 + g 100 -12.6 -3.95022 | opp_overlap 33706 33704 TTATCTTTAATAATA TCTTTTAAATCA TTT TGATTTAAAAGA TTTAATGTTGATAAA TERM 41 34698 - 34672 - R 83 -9.6 -3.64599 | opp_overlap 34678, overlap 34678 TTATTATATGTTAAA TAAAAAGCAGTT TTA AACTGCTTTATA ATCTAGAGCTATAAC TERM 42 34692 - 34678 - R 100 -8.6 -5.28942 | opp_overlap 34678, overlap 34672 TATGTTAAATAAAAA GCAGTT TTA AACTGC TTTATAATCTAGAGC TERM 43 34678 - 34692 + r 79 -8.6 -4.0162 | opp_overlap 34678 34672 TATGTTAAATAAAAA GCAGTT TTA AACTGC TTTATAATCTAGAGC MSC_0032 37836 - 34684 - | hypothetical protein TERM 44 34790 - 34806 + g 72 -5.9 -4.39287 | CCTAATCTTTTAGAT TCTTTAG TAT CTGAAGA TTTTAATCTAATTAA TERM 45 35123 - 35133 + g 71 -5.4 -4.62957 | opp_overlap 35123 TGTAAAGGAGAATAA GATG AAT CATC TTTTAATTTGGTTCT TERM 46 37602 - 37577 - G 70 -4.9 -4.86731 | opp_overlap 37589, overlap 37572 GGTCGTCAAATAAAA TCACTACTAAA TTCA TTTAATAATGA TTTTTTTCCAATCTT TERM 47 37589 - 37602 + g 75 -3.9 -5.46629 | opp_overlap 37577 37572 AAATCACTACTAAAT TCATT TAAT AATGA TTTTTTTCCAATCTT TERM 48 38402 - 38391 - g 73 -3 -5.68438 | TGAGCAAAGAAAAAA GATA TTTT TATC TACAAAGATAACCAA MSC_0033 37983 - 43370 + | permease TERM 49 43383 - 43403 + F 100 -8.4 -5.82036 | opp_overlap 43383 TAATAAAATGTTAAA CCAAATAC TAAAT GTATTTGG TTTTTTATTTATTAT TERM 50 43403 - 43383 - f 76 -8.4 -3.80207 | opp_overlap 43383 TAATAAAATGTTAAA CCAAATAC TAAAT GTATTTGG TTTTTTATTTATTAT ldh 43808 - 44794 + | D-lactate dehydrogenase MSC_0035 44813 - 45937 + | malate permease TERM 51 45975 - 45957 - f 87 -10.4 -3.19234 | opp_overlap 45957, overlap 45955 45953 AAATTTTATAACAGA GTGAAGTT AAA AACTTCAC TTTTTTATTGTTTTA TERM 52 45957 - 45975 + F 100 -10.4 -5.77677 | opp_overlap 45957 45955 45953 AAATTTTATAACAGA GTGAAGTT AAA AACTTCAC TTTTTTATTGTTTTA MSC_0036 46289 - 47215 + | hypothetical protein TERM 53 47558 - 47535 - g 74 -6.2 -4.66746 | gap 1, overlap 47538 TATAAAAGAAAAGAA GAT-GGAATTA TTG TAATTCCGATC AATGCATTAAAAGAT MSC_0037 47223 - 47576 + | hypothetical protein TERM 54 47602 - 47582 - f 90 -6.9 -5.69023 | opp_overlap 47582 AAAAGATTAAAAAAA CCAAGATTT TAT AAGTCTTGG TTTTTTAGTTATATT TERM 55 47582 - 47602 + F 100 -9.1 -5.3671 | opp_overlap 47582 AAAAGATTAAAAAAA CCAAGATTT TAT AAGTCTTGG TTTTTTAGTTATATT TERM 56 47685 - 47719 + F 70 -3.8 -5.24129 | gap 2, overlap 47686 47715 47716 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 57 47686 - 47717 + F 84 -8.9 -4.25873 | gap 1, overlap 47685 47715 47716 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 58 48224 - 48196 - g 91 -8.3 -5.04356 | opp_overlap 48204, overlap 48186 48201 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 59 48219 - 48201 - g 79 -9 -3.48824 | opp_overlap 48204, overlap 48196 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 47780 - 49453 + | IS1634BT transposase TERM 60 49482 - 49472 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 61 49549 - 49569 + T 81 -5.5 -5.3671 | AACGTAGGAAAAAAA CTAAGATTT TAT AAGTCTTGG TTTTTTAGTTATATT ftsH 51529 - 49583 - | ATP-dependent zinc metallopeptidase FtsH TERM 62 50452 - 50463 + g 80 -3 -6.08342 | opp_overlap 50452 TTCTATGTCAATCAA TTGA TGGA TCAA TTTTTTTATTTCTTG TERM 63 51725 - 51739 + H 100 -10 -5.44721 | ACCCCTATGCTGGAA GGAGAC TAT GTCTCC TTTTTTTAAAGTGGT MSC_0040 51761 - 52144 + | hypothetical protein MSC_0041 52237 - 52605 + | hypothetical protein TERM 64 52608 - 52620 + T 70 -3.5 -5.32396 | overlap 52609 52613 TAATGCTTTTTAATT TTATT TAA AATAA TTTTATTTTTAATAT MSC_0042 53794 - 52589 - | hypothetical protein TERM 65 53136 - 53148 + g 91 -4.9 -6.00086 | opp_overlap 53136, overlap 53125 53124 ATGTTATTTTTTAAA TAGTT ATC AACTA TTTTTTTTATGCTGT TERM 66 53751 - 53728 - G 100 -8.2 -5.9218 | opp_overlap 53727 53725 53728 53730 53740 53742, overlap 53731 TACACAATAAAAAAA CACTATCAGG TCCA CCTGATACTG CTATTAGGTATTTTT TERM 67 53748 - 53731 - G 74 -8.5 -3.32312 | opp_overlap 53730 53728 53727 53725 53740 53742, overlap 53728 ACAATAAAAAAACAC TATCAGG TCCA CCTGATA CTGCTATTAGGTATT MSC_0043 54624 - 53797 - | hypothetical protein MSC_0044 55398 - 54676 - | methyltransferase holB 56138 - 55398 - | DNA polymerase III delta subunit tmk 56757 - 56116 - | thymidylate kinase recR 57358 - 56990 - | DNA repair protein RecR TERM 68 57067 - 57077 + g 70 -4 -5.1287 | CTTTGTATTTATTAG CATT TTC AATG TTTTTTGCATCTAAA dnaX 59309 - 57351 - | DNA polymerase III gamma-tau subunits codA 59846 - 59379 - | cytosine deaminase guaC 60925 - 59963 - | guanosine 5'-monophosphate oxidoreductase MSC_0051 61824 - 61276 - | hypothetical protein TERM 69 61908 - 61929 + r 70 -4.5 -5.05505 | opp_overlap 61912, overlap 61912 TAGAAATCAAATAAA AAAAGAAGT ATAA ACTTCTTTA TTTTTGGTTTATAAT TERM 70 61925 - 61912 - R 95 -5.3 -6.01187 | opp_overlap 61912 61908 AATCAAATAAAAAAA GAAGT ATAA ACTTC TTTATTTTTGGTTTA TERM 71 61912 - 61925 + r 75 -5.3 -5.00388 | opp_overlap 61912, overlap 61908 AATCAAATAAAAAAA GAAGT ATAA ACTTC TTTATTTTTGGTTTA MSC_0052 64427 - 62352 - | hypothetical protein TERM 72 63418 - 63430 + g 72 -4.9 -5.08601 | opp_overlap 63418 63416 TTATTATTAAAAATA CTTTT ATC AAAAG TTTTTCTTAAACTAA TERM 73 63994 - 64006 + g 70 -4.9 -4.73682 | opp_overlap 63994 TGTGGATTATAAAAT TTAGT TTT ACTAA TTTTATCTTCTCCAA TERM 74 64557 - 64538 - R 100 -8 -5.62288 | opp_overlap 64538 TTAATAAAATAAAAA CCTTAATA AAAC TATTAAGG TTAATTACAATTTAA TERM 75 64538 - 64557 + r 70 -8 -3.3907 | opp_overlap 64538 TTAATAAAATAAAAA CCTTAATA AAAC TATTAAGG TTAATTACAATTTAA MSC_0053 65054 - 64605 - | AhpC/TSA family protein ptsG 65125 - 66867 + | PTS system, glucose-specific IIABC component TERM 76 66939 - 66983 + T 93 -7.3 -5.64321 | opp_overlap 66940 66943 66945, overlap 66940 66945 AAATTTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 77 66940 - 66982 + T 95 -10.8 -3.94933 | opp_overlap 66940 66943 66945, overlap 66939 66945 AATTTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 78 66945 - 66977 + T 100 -10.7 -4.88326 | opp_overlap 66943 66940 66945, overlap 66940 66939 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT tnpB 67781 - 66921 - | IS1296IE transposase protein B tnpA 68344 - 67790 - | IS1296IE transposase protein A MSC_0057 68582 - 68400 - | hypothetical protein MSC_0058 69014 - 68766 - | hypothetical protein MSC_0059 69090 - 68941 - | hypothetical protein TERM 79 69296 - 69315 + H 100 -8 -6.04324 | opp_overlap 69300 TTCCTTGGATTTACA TTAACTTC TAGT GAAGTTAA TTTTTTATTTTTTCA TERM 80 69499 - 69533 + H 70 -3.8 -5.24129 | gap 2, overlap 69500 69529 69530 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 81 69500 - 69531 + H 84 -8.9 -4.25873 | gap 1, overlap 69499 69529 69530 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 82 70038 - 70010 - g 91 -8.3 -5.04356 | opp_overlap 70018, overlap 70000 70015 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 83 70033 - 70015 - g 79 -9 -3.48824 | opp_overlap 70018, overlap 70010 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 69594 - 71267 + | IS1634BK transposase TERM 84 71296 - 71286 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC lpp 72136 - 71462 - | prolipoprotein TERM 85 72061 - 72081 + g 72 -9.1 -2.71364 | opp_overlap 72057 72054 72067, overlap 72064 AATTAGAACAGCTTA CAACAGTTG AAC CAATTGTTG TAATTGACCCAATAA MSC_0062 72310 - 72609 + | hypothetical protein TERM 86 72656 - 72644 - g 74 -4.9 -5.1244 | opp_overlap 72644 TGAGTAACATAAAAA CAATT ATT AATTG AATTTCTTATTTTAA MSC_0063 72628 - 73209 + | hypothetical protein ald 73306 - 74436 + | alanine dehydrogenase MSC_0065 74837 - 75661 + | hypothetical protein TERM 87 75670 - 75683 + F 90 -6.7 -5.79595 | opp_overlap 75669 75670 TCAATAATATCAAAG CAAGC CACG GCTTG TTTTTTGTTTTAAGA serS 75743 - 77011 + | seryl-tRNA synthetase MSC_0067 77113 - 77427 + | hypothetical protein TERM 88 78115 - 78130 + G 70 -7.6 -3.44158 | overlap 78114 GGTATCAAGAGCTTG TCAAGG AAAT CCTTGA ATTTTTGATCAAATT MSC_0068 77429 - 78403 + | NifR transcriptional regulator TERM 89 79543 - 79553 + G 75 -5.4 -5.02323 | overlap 79529 GTTGAATCAACTATT GTTG AAC CAAC TTTTGTTTATGGTCA lysS 78406 - 79908 + | lysine-tRNA ligase TERM 90 79913 - 79932 + T 73 -6.5 -4.33165 | opp_overlap 79913, overlap 79910 CAAGAGAATAATTGA GTAGAAC TTATAT GTTCTAC TTTTCCTACGTTTCC TERM 91 79996 - 80006 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 81702 - 80179 - | IS1634BA transposase TERM 92 81258 - 81286 + g 91 -8.3 -5.04356 | opp_overlap 81266, overlap 81263 81284 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 93 81263 - 81281 + g 79 -9 -3.48824 | opp_overlap 81266, overlap 81258 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 94 81797 - 81763 - R 70 -3.8 -5.24129 | gap 2, overlap 81744 81743 81765 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGAA TERM 95 81796 - 81765 - R 84 -8.9 -4.25873 | gap 1, overlap 81744 81743 81763 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGA TERM 96 82207 - 82173 - R 75 -3.8 -5.60993 | gap 2, overlap 82153 82152 82175 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 97 82206 - 82175 - R 86 -8.9 -4.45201 | gap 1, overlap 82153 82152 82173 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 98 82227 - 82246 + r 87 -6.5 -5.4505 | overlap 82224 GAAACGTAGGATTGA GTAGAAC TTATAT GTTCTAC TTTTTTATTACAAAA TERM 99 82284 - 82300 + r 80 -9.5 -3.11951 | opp_overlap 82284, overlap 82282 82280 82276 TTACTAATAAAAAAA CCAACTT TTA AAGTTGG TCTATATATTAATCA TERM 100 82300 - 82284 - R 100 -9.5 -5.84381 | opp_overlap 82284 82282 82280 82276 TTACTAATAAAAAAA CCAACTT TTA AAGTTGG TCTATATATTAATCA trxA 82617 - 82309 - | thioredoxin MSC_0073 83470 - 82628 - | HAD family hydrolase TERM 101 83582 - 83568 - H 82 -5.7 -5.60864 | opp_overlap 83568 CATATATTAAAAAAA GAACC ATTAA GGTTC TTTAGTTAAACTGGC TERM 102 83990 - 83971 - H 72 -8.6 -3.21395 | gap 1, opp_overlap 83973, overlap 83974 ACTGGCGTGACAACA GGA-GCACC AGG GGTGCATCC ATTCCGGTCCTCTCG TERM 103 83986 - 83974 - H 73 -9.1 -2.80074 | opp_overlap 83973, overlap 83971 GGCGTGACAACAGGA GCACC AGG GGTGC ATCCATTCCGGTCCT TERM 104 84211 - 84227 + H 77 -7.3 -4.4715 | GGGGGAGATAAGCCT GTTATCC CCG GGGTAAC TTTTATCCGTTGAGC TERM 105 88215 - 88228 + H 77 -6.7 -4.58236 | overlap 88219 TCCCCATCTCATAGT GAACC AAAC GGTTC TTTTGATCTTTTCTC TERM 106 88662 - 88696 + H 75 -3.8 -5.60993 | gap 2, overlap 88663 88692 88693 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 107 88663 - 88694 + H 86 -8.9 -4.45201 | gap 1, overlap 88662 88692 88693 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 108 89202 - 89174 - g 91 -8.3 -5.04356 | opp_overlap 89182, overlap 89164 89179 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 109 89197 - 89179 - g 79 -9 -3.48824 | opp_overlap 89182, overlap 89174 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 88758 - 90431 + | IS1634BV transposase TERM 110 90460 - 90450 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 111 90706 - 90693 - f 90 -6.7 -5.63517 | opp_overlap 90693 TTTTCAAATAAAAAA CCAGA AATA TCTGG TTAGATTTCAAAAAA MSC_0075 91074 - 92372 + | hypothetical protein comEC 92413 - 93141 + | competence protein ComEC TERM 112 93167 - 93146 - T 86 -3.7 -6.04324 | opp_overlap 93156 TTAAAAAATAAAAAA CCTAGAGTT TTTA AAATCCAGG TTTTAATTAATAATC phnE 95909 - 93174 - | phosphonate ABC transporter, permease component TERM 113 93210 - 93229 + g 73 -2.2 -5.69473 | overlap 93211 TTTGATAGTTCTAGT TTGTTTTG TAAA TAAAACAG TTTTTTTATACTCTC TERM 114 95912 - 95926 + r 73 -2.9 -5.66868 | TTTTATTAAGCATTA TCTAT TCTCC ATAGA TTTTTTTCATTGCTT phnC 96665 - 95913 - | phosphonate ABC transporter, ATP-binding component TERM 115 96508 - 96526 + g 71 -5.4 -4.61231 | opp_overlap 96508 96509 96511, overlap 96509 TCACCTGAAGAAATA TCATTAAT TTT ATTAATGG TTTTTAAAAGTGTAG phnD? 98022 - 96679 - | prolipoprotein, putative phosphonate ABC transport TERM 116 97900 - 97925 + g 72 -4.9 -4.9445 | opp_overlap 97917, overlap 97914 TGATTCAACTCTTGT TTGTTTTTG AGATGGAA CAAAAACAA TTTTTAGTTCGTTAT TERM 117 98001 - 98013 + g 70 -3.5 -5.31545 | ATAAACTTATTCCCA TTAAT GAT ATTAA TTTTTTCATATTATT TERM 118 98301 - 98267 - R 78 -5.3 -5.25699 | gap 1, opp_overlap 98267 ATTAGAGAATAAAAA CAAATGCAATATCA TTTAACTT TG-TATTGCATTTG TTTGCCAATAATTAA asnC 99671 - 98313 - | asparaginyl-tRNA synthetase MSC_0081 100519 - 99680 - | HAD family hydrolase MSC_0082 101660 - 100530 - | alpha/beta family hydrolase TERM 119 100747 - 100757 + g 76 -2.6 -5.90231 | ATTAAAAGTTCATCA TTTA GAT TAAA TTTTTTTCTATTTAT gcp 102642 - 101683 - | O-sialoglycoprotein endopeptidase TERM 120 101970 - 101992 + g 75 -7.9 -3.86194 | TAATTTCTTGATTTT TTTGATTCA AATTA TGAATCAAA TTTATACAAGCAGTT MSC_0084 102960 - 102736 - | hypothetical protein trmE 103160 - 104518 + | tRNA modification GTPase TrmE TERM 121 104540 - 104524 - T 100 -9.5 -6.11229 | opp_overlap 104521 AGGAAAATAAAAAAA TCAACCT GAC AGGTTGA TAACATTATTTTATG rpsT 104811 - 104566 - | 30S ribosomal protein S20 TERM 122 105099 - 105112 + r 80 -2.5 -6.14618 | opp_overlap 105099 TTTTTAATTAAAAAG TTATT TTGT AATAA TTTTTTTGTTTTATC MSC_0087 105890 - 105138 - | hypothetical protein MSC_0088 106593 - 105976 - | hypothetical protein TERM 123 106677 - 106658 - R 100 -8 -5.34055 | opp_overlap 106658 ATAAATAGTAAAAAA GTGTTATA AATT TATAACAC TTTAAATTAGCCTAT TERM 124 106658 - 106677 + r 73 -8 -3.76393 | opp_overlap 106658 ATAAATAGTAAAAAA GTGTTATA AATT TATAACAC TTTAAATTAGCCTAT secA 109518 - 106684 - | preprotein translocase subunit SecA TERM 125 109217 - 109203 - G 71 -8.6 -2.97676 | opp_overlap 109198 109205, overlap 109202 109199 109205 ATGCATTTAAATAAG CAGGAA AAA TTCCTG TTAAAGTTTTACCTT pepQ 109609 - 110184 + | proline dipeptidase polA 110260 - 111174 + | DNA polymerase I, 5'-3' exonuclease TERM 126 111182 - 111161 - f 100 -8.8 -5.87996 | opp_overlap 111161 GAACTAATAAAAAAA CAGTGAAC AAATAG GTTCACTG TTTTTAGTTATAAGT TERM 127 111161 - 111182 + F 100 -8.8 -4.93968 | opp_overlap 111161 GAACTAATAAAAAAA CAGTGAAC AAATAG GTTCACTG TTTTTAGTTATAAGT MSC_0092 111334 - 111888 + | hypothetical protein TERM 128 111964 - 111987 + F 73 -3.2 -5.55769 | overlap 111967 AGAAAGACAATAATT CAACATATTT TTAT AAATGTGATG TTTTTTATTATACAG TERM 129 112065 - 112044 - f 100 -13.1 -3.39884 | opp_overlap 112044, overlap 112034 AAATACTATTTATAA TTAGGTCGG AATT CCGACCTAA TTTTTTATGACACAT TERM 130 112044 - 112065 + F 100 -13.1 -5.24531 | opp_overlap 112034 112044 AAATACTATTTATAA TTAGGTCGG AATT CCGACCTAA TTTTTTATGACACAT TERM 131 112329 - 112342 + F 74 -8.1 -3.46285 | opp_overlap 112329, overlap 112323 AACAAAACATAAAAA GTCGG AATT CCGAC TTAATATTTCAAATA TERM 132 112342 - 112329 - f 100 -8.1 -5.34632 | opp_overlap 112329 112323 AACAAAACATAAAAA GTCGG AATT CCGAC TTAATATTTCAAATA TERM 133 112402 - 112389 - f 76 -8.1 -3.76888 | opp_overlap 112388, overlap 112387 TACTTATAATAAATA GTCGG AATT CCGAC CTAATTGTCTATGAG TERM 134 112516 - 112530 + G 71 -5.8 -4.69464 | GAATAAGACGTTGTG GTAAAT CTT ATTTAC TTTTTAAACTATTTT MSC_0093 112407 - 113027 + | hypothetical protein MSC_0094 113162 - 113719 + | hypothetical protein TERM 135 113829 - 113805 - f 70 -4.4 -5.02777 | ACATAGAAAAACAAA TATTGCATTT TTATT AATTGCAATA CAAATAAATATAAAT MSC_0095 114283 - 114558 + | hypothetical protein coaE 114548 - 115117 + | dephospho-COA kinase TERM 136 115102 - 115121 + F 79 -3.6 -5.73672 | opp_overlap 115102 TTATATACAAAAAAA TAGGCTAT TAGA ATAACCTA TTTTTTTAATTCTTT TERM 137 115121 - 115102 - f 86 -5.8 -5.76633 | opp_overlap 115102 TTATATACAAAAAAA TAGGCTAT TAGA ATAACCTA TTTTTTTAATTCTTT TERM 138 115720 - 115692 - g 91 -8.3 -5.04356 | opp_overlap 115700, overlap 115682 115697 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 139 115715 - 115697 - g 79 -9 -3.48824 | opp_overlap 115700, overlap 115692 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 115276 - 116949 + | IS1634BO transposase TERM 140 116978 - 116968 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG ATATCAAAAATTTAC TERM 141 117138 - 117157 + T 100 -8 -5.73672 | opp_overlap 117138 TTATATACAAAAAAA TAGGTTAT TAGA ATAACCTA TTTTTTTAATTCTTT TERM 142 117157 - 117138 - T 100 -8 -5.76633 | opp_overlap 117138 TTATATACAAAAAAA TAGGTTAT TAGA ATAACCTA TTTTTTTAATTCTTT TERM 143 117633 - 117643 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 119335 - 117662 - | IS1634AP transposase TERM 144 118891 - 118919 + g 91 -8.3 -5.04356 | opp_overlap 118899, overlap 118896 118917 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 145 118896 - 118914 + g 79 -9 -3.48824 | opp_overlap 118899, overlap 118891 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC hlyA 119877 - 119428 - | hemolysin A TERM 146 119523 - 119505 - G 73 -7.6 -3.78034 | opp_overlap 119505 119502 119498 119493 GACTCATATTAATAA CTTTTAAA TTA TTTAAAAG TGATTGATGTAATTG xseB 120092 - 119877 - | exodeoxyribonuclease VII small subunit xseA 121491 - 120082 - | exodeoxyribonuclease VII large subunit nusB 121891 - 121493 - | transcription termination factor nusB MSC_0103 122778 - 121903 - | hypothetical protein TERM 147 122311 - 122321 + g 75 -4 -5.61881 | overlap 122314 GTTGTTTTTAGTATT TTGT AAA ACAA TTTTTATTTTTGCGA TERM 148 122603 - 122613 + g 78 -5.4 -5.24531 | AAAACATTTACTGCT GTTG GCT CAAC TTTTTTATAAAAAGT MSC_0104 123012 - 122833 - | hypothetical protein nfo 123907 - 123038 - | endodeoxyribonuclease IV TERM 149 123114 - 123148 + g 86 -9.6 -3.86346 | opp_overlap 123114 GTTTTATCTATATAA GGTGTTTCTAATATTT TTG AAATATTAGAAAAATC TTTATCAAAAACTAC ribC/ribF 124652 - 123900 - | riboflavin kinase / FAD synthetase TERM 150 123944 - 123958 + g 75 -5.8 -4.91873 | AACACTCTTTTTTGT CATTAT TTA ATAATG TTTTTAATTGCTCTA TERM 151 124713 - 124688 - R 74 -6.3 -4.61566 | opp_overlap 124695, overlap 124695 TTTTAAAGCATAAAA TAAAAAAGACT TAAA AGTCTTTTTTT GTGTTATCAAAAATG TERM 152 124706 - 124695 - R 86 -4.4 -5.86976 | opp_overlap 124695, overlap 124688 GCATAAAATAAAAAA GACT TAAA AGTC TTTTTTTGTGTTATC TERM 153 124695 - 124706 + r 86 -4.4 -5.84432 | opp_overlap 124695 124688 GCATAAAATAAAAAA GACT TAAA AGTC TTTTTTTGTGTTATC MSC_0107 127001 - 124866 - | hypothetical protein epsG 127251 - 128600 + | glycosyltransferase TERM 154 128616 - 128634 + T 87 -6 -5.73339 | opp_overlap 128616, overlap 128606 ATATTTAAACAAAAA GCAAGTAT TAA ACACTTGC TTTTTTTATAGTTAT TERM 155 128634 - 128616 - T 100 -8.2 -5.31519 | opp_overlap 128616 128606 ATATTTAAACAAAAA GCAAGTAT TAA ACACTTGC TTTTTTTATAGTTAT cps 129567 - 128653 - | glycosyltransferase TERM 156 129935 - 129891 - R 76 -4.5 -5.27476 | CTTAATAAAATAAAA TAGACAATTATAAATAAGATT AAA ATTCTTAAATATAATTGACTA AATAAGCATATTATT galU 130842 - 129970 - | UTP-glucose-1-phosphate uridylyltransferase MSC_0111 131491 - 131051 - | hypothetical protein MSC_0112 131545 - 132321 + | hypothetical protein TERM 157 132317 - 132351 + F 100 -10.3 -4.50686 | opp_overlap 132324, overlap 132324 AAGTTAAACCTGTTA GATAAAAGAATTAAC AACAA GTTATTTCTTTTATC TTTCTTAATTTTTAG TERM 158 132702 - 132686 - g 73 -6.7 -4.30448 | AAATTGAAGCTAAAA TTCATAA GAT TTATGAA AATATGGCAATTGAA abc 132385 - 133923 + | ABC transporter, ATP-binding protein TERM 159 133946 - 133928 - f 85 -6 -5.58179 | opp_overlap 133928 TAGTAGAATAAAAAA CGAGAAAT TTA AATTCTCG TTTTTTTAATATGAT TERM 160 133928 - 133946 + F 85 -6 -5.59357 | opp_overlap 133928 TAGTAGAATAAAAAA CGAGAAAT TTA AATTCTCG TTTTTTTAATATGAT TERM 161 135774 - 135794 + G 78 -9.7 -3.00908 | overlap 135773 135776 TTGTAACTGAAGGTT CAGGAGCAG TTA CTGCTGCTG CTTTAATGTTTGATA ilvA 134936 - 136162 + | threonine dehydratase MSC_0115 136380 - 137960 + | hypothetical protein MSC_0116 137972 - 138832 + | hypothetical protein TERM 162 138833 - 138871 + F 85 -10 -3.17289 | gap 1, opp_overlap 138833 138842, overlap 138842 GAAATTAAAAAATAA TAATAAAA-ATCAGCAC AACTAA GTGCTGATTTTTTATTA TCTATTAAATTTATA TERM 163 138871 - 138833 - f 100 -10 -4.76088 | gap 1, opp_overlap 138833 138842, overlap 138842 GAAATTAAAAAATAA TAATAAAA-ATCAGCAC AACTAA GTGCTGATTTTTTATTA TCTATTAAATTTATA TERM 164 138861 - 138842 - f 100 -7.9 -5.40014 | opp_overlap 138833 138842, overlap 138833 AAATAATAATAAAAA TCAGCAC AACTAA GTGCTGA TTTTTTATTATCTAT TERM 165 138842 - 138861 + F 100 -7.9 -5.62045 | opp_overlap 138842 138833, overlap 138833 AAATAATAATAAAAA TCAGCAC AACTAA GTGCTGA TTTTTTATTATCTAT TERM 166 139068 - 139046 - f 76 -9.3 -2.81225 | opp_overlap 139043 TATATAATGGAATTA GCTATATAC ACTAG GTATATAGC CGGTTAACTTCAAAA TERM 167 139649 - 139611 - g 93 -7.6 -5.13722 | opp_overlap 139611 TTTAGTAAAAGAAAA TCTAGAATTAGGTGCTTA TAC TAAAGACCAAATCCTAGA TAATTCAAAATTTCA lpp 139108 - 139824 + | putative variable prolipoprotein uhpT 140141 - 141556 + | hexosephosphate transport protein TERM 168 141584 - 141604 + F 100 -9.9 -6.47325 | opp_overlap 141584 AATAATTAATGTAAA TCACAATTT TTA AAATTGTGA TTTTTTTTATTTTTT TERM 169 141604 - 141584 - f 90 -9.9 -3.827 | opp_overlap 141584 AATAATTAATGTAAA TCACAATTT TTA AAATTGTGA TTTTTTTTATTTTTT TERM 170 141810 - 141799 - f 82 -4.4 -5.7946 | overlap 141800 TGTGTAAGAAAAAAA TGGT TCTA ACCA ACCAAAAGAAGGTAA MSC_0119 141827 - 141979 + | hypothetical protein TERM 171 142956 - 142926 - T 80 -2.8 -6.10295 | gap 1, overlap 142928 GCAATATAAAAAAAA TA-CAAATGCCAT ATAAAA ATGACATTTGGTA TGAAACTGAGTTACC TERM 172 142953 - 142928 - T 79 -7 -4.67703 | overlap 142926 AATATAAAAAAAATA CAAATGCCAT ATAAAA ATGACATTTG GTATGAAACTGAGTT TERM 173 143119 - 143129 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 174 144380 - 144408 + T 91 -8.3 -5.04356 | opp_overlap 144388, overlap 144385 144406 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 175 144385 - 144403 + T 79 -9 -3.48824 | opp_overlap 144388, overlap 144380 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 176 144919 - 144885 - T 70 -3.8 -5.24129 | gap 2, overlap 144866 144865 144887 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGT TERM 177 144918 - 144887 - T 84 -8.9 -4.25873 | gap 1, overlap 144866 144865 144885 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG lppC 145407 - 144916 - | prolipoprotein lppC tnp 146899 - 145487 - | transposase ISMmy1E TERM 178 146051 - 146079 + g 73 -5.5 -4.8543 | opp_overlap 146055 146060, overlap 146049 ATTAAATCCAGATTT TAAATTAAACTTT TTA AAAGTATGATTTA TTTTTATAGGGATTA TERM 179 147019 - 147001 - R 100 -7.5 -5.82388 | opp_overlap 147000 147003 147018 AAATTGGAAAAAAAA TAGAGCT TTTTT AGCTCTA AATTTAAGAAAATTT TERM 180 147246 - 147274 + r 75 -9 -3.21241 | opp_overlap 147246, overlap 147244 147243 TTTAACAAGAAAAAA GCAAGATCTTGA AAATA TCAAAATCTTGC TAATTTGTTTAGTAT TERM 181 147274 - 147246 - R 100 -11.2 -5.64873 | opp_overlap 147246 147244 147243 TTTAACAAGAAAAAA GCAAGATCTTGA AAATA TCAAAATCTTGC TAATTTGTTTAGTAT MSC_0124 147746 - 147459 - | hypothetical protein TERM 182 147749 - 147761 + H 76 -6.3 -4.80167 | CTAAATTTTGCATTG GAAAC TTT GTTTC TTTTGGTTTTTCATC TERM 183 148859 - 148827 - g 82 -5.8 -5.57729 | gap 1, opp_overlap 148829, overlap 148829 AAACAATATAAAAAA GT-TCAAATACCAGA TAAA CCTGATATTTGATAC TTAACAGGAGTTGCT MSC_0126 148800 - 148916 + | hypothetical protein TERM 184 149155 - 149173 + F 100 -7.5 -5.49809 | opp_overlap 149139 149154 149157 AAATTTTCTTAAATT TAGAGCT AAAAA AGCTCTA TTTTTTTCCAATTTC TERM 185 150975 - 150931 - f 93 -7.3 -5.64321 | opp_overlap 150932 150935 150937, overlap 150932 150937 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 186 150974 - 150932 - f 95 -10.8 -3.94933 | opp_overlap 150932 150935 150937, overlap 150931 150937 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 187 150969 - 150937 - f 100 -10.7 -4.88326 | opp_overlap 150935 150932 150937, overlap 150932 150931 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA TERM 188 151385 - 151355 - g 78 -5.5 -5.18643 | opp_overlap 151354 151355 TCAAGTAAAACAAAA TCCGTTTGCAAAA ATTGG TTTTGCAACAGGA GTTAGTCCAATTGAT nagB 151275 - 152042 + | glucosamine-6-phosphate deaminase TERM 189 153067 - 153056 - g 79 -2.2 -6.15717 | TAAAGATAAAAAAAA GCAA ATGA CTGC TTTTTATGGGGGTTC nagE 152046 - 153719 + | PTS system, N-acetylglucosamine-specific IIBC component TERM 190 153735 - 153753 + F 100 -10.4 -5.43329 | opp_overlap 153735 TTTAATAATTATAAA GTTCAGAT TAA ATCTGAAC TTTTATTTTGTTTTT TERM 191 153753 - 153735 - f 95 -10.4 -4.14257 | opp_overlap 153735 TTTAATAATTATAAA GTTCAGAT TAA ATCTGAAC TTTTATTTTGTTTTT TERM 192 155173 - 155150 - g 70 -7.6 -3.39165 | overlap 155141 155148 AAATAATTAAAGACA CTTCAACATT AGCA AATGTTAAAG GAAAAGATTTGTTTA gltX 153850 - 155301 + | glutamate-tRNA ligase TERM 193 156310 - 156294 - g 85 -8.1 -4.66537 | opp_overlap 156293 156291 156294 AATAAATTAAACAAA TTAGGAT TAG ATCCTAA ATATTATTTATTAGA TERM 194 156505 - 156482 - g 70 -2.6 -5.52909 | gap 1, overlap 156484 156496 TAATAGTCAAAAAAA TCTGAGAAAAA TTA TTTTTC-CAAA AGAAATAGTGTAGAA MSC_0132 155304 - 156518 + | hypothetical protein MSC_0133 156544 - 156972 + | hypothetical protein TERM 195 156978 - 157003 + F 73 -3.4 -5.54338 | TAATCGATAATTAAA GGTTGTAAAA CTAAGT TTTTATGACC TTTTTATTTTAATTA TERM 196 157725 - 157743 + G 83 -7.6 -4.55625 | opp_overlap 157725 157724 157729, overlap 157729 TTCACCAAAAGATAT TAAAGAAA AAA TTTCTTTA TTTTGTAATGTTCCT ctrA 157063 - 158661 + | CTP synthetase TERM 197 158682 - 158700 + F 100 -10.4 -5.28983 | opp_overlap 158681 158682 AATAATATGATTAAG CTCACAAT TAA ATTGTGAG TTTTTATCTTTTAGG TERM 198 158700 - 158682 - f 81 -10.4 -2.57548 | opp_overlap 158682, overlap 158681 AATAATATGATTAAG CTCACAAT TAA ATTGTGAG TTTTTATCTTTTAGG MSC_0135 158895 - 159857 + | hypothetical protein MSC_0136 159872 - 160840 + | hypothetical protein TERM 199 160897 - 160941 + T 93 -7.3 -5.64321 | opp_overlap 160898 160901 160903, overlap 160898 160903 AAATTTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 200 160898 - 160940 + T 95 -10.8 -3.94933 | opp_overlap 160898 160901 160903, overlap 160897 160903 AATTTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 201 160903 - 160935 + T 100 -10.7 -4.88326 | opp_overlap 160903 160901 160898, overlap 160898 160897 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT tnpB 161739 - 160879 - | IS1296MP transposase protein B tnpA 162290 - 161748 - | IS1296MP transposase protein A TERM 202 163293 - 163283 - g 75 -5.4 -5.06451 | GATGATGCTAAAAAA GGAT TTG ATCC ACGTAAGTTATTAAA fbaA2 162491 - 163384 + | fructose-bisphosphate aldolase class II TERM 203 163495 - 163505 + F 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 204 164752 - 164780 + F 91 -8.3 -5.04356 | opp_overlap 164760, overlap 164757 164778 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 205 164757 - 164775 + F 79 -9 -3.48824 | opp_overlap 164760, overlap 164752 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 206 165292 - 165258 - f 75 -3.8 -5.60993 | gap 2, overlap 165238 165237 165260 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 207 165291 - 165260 - f 86 -8.9 -4.45201 | gap 1, overlap 165238 165237 165258 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG tnpA 165395 - 165937 + | IS1296EH transposase protein A TERM 208 166789 - 166745 - T 93 -7.3 -5.64321 | opp_overlap 166746 166749 166751, overlap 166746 166751 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 209 166788 - 166746 - T 95 -10.8 -3.94933 | opp_overlap 166746 166749 166751, overlap 166745 166751 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 210 166783 - 166751 - T 100 -10.7 -4.88326 | opp_overlap 166749 166746 166751, overlap 166746 166745 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA TERM 211 166856 - 166868 + T 73 -3.5 -5.46129 | overlap 166855 TCAATTGCGATTATT TAATT ATT AATTA TTTTTTGATTTGTTG MSC_0143 167699 - 166866 - | hypothetical protein TERM 212 167248 - 167270 + g 73 -4.2 -5.2015 | opp_overlap 167230 167228 167226 167223 ACAATAACTCTTACT GTTCATAAAT ATC ATTTAGGAGC TTTTTCTATTATTCA MSC_0144 168364 - 167999 - | hypothetical protein TERM 213 169520 - 169510 - g 75 -4 -5.52986 | ACTTTATTAAAAAAA CAAT CAA ATTG CGAACTATTTAAAAA glpQ 168949 - 169662 + | glycerophosphodiester phosphodiesterase TERM 214 169686 - 169705 + F 100 -8 -6.11229 | opp_overlap 169686 TAATAGTATGTAAAA TAATAGCA AATT TGCTATTA TTTTTTTATTTTAAT TERM 215 169705 - 169686 - f 78 -8 -4.23723 | opp_overlap 169686 TAATAGTATGTAAAA TAATAGCA AATT TGCTATTA TTTTTTTATTTTAAT rpmE 169823 - 170101 + | 50S ribosomal protein L31 TERM 216 170108 - 170120 + F 86 -5.5 -5.63517 | AACAAATAATTTTGA GGTCC CTA GGATC TTTTTTATTTGACAA TERM 217 171366 - 171351 - g 70 -3.4 -5.29208 | overlap 171358 AAAAGAAAAAAGAAA TTAAAA GTGT TTTTAA ACAAGCAGTTGAAAA MSC_0147 170156 - 172072 + | hypothetical protein dhh 172082 - 173032 + | DHH family protein (MgpA-like protein) tdk 173034 - 173663 + | thymidine kinase TERM 218 173802 - 173792 - g 75 -4 -5.5454 | CTAAACAAAGAAAAA TCTA ATT TAGA AGAAGTTGTTGAAAA TERM 219 174273 - 174287 + G 79 -8.6 -4.1899 | opp_overlap 174267 174275, overlap 174270 GAATTCAAACTTCAA CAGCAA CTG TTGCTG TTTTACCTGAAATGA prfA 173666 - 174760 + | peptide chain release factor 1 TERM 220 174800 - 174822 + G 79 -8.5 -4.13711 | opp_overlap 174796 174800, overlap 174818 AATAAAAAACACTAA CATCAGTCT GAATA AGGCTGATG TTTATCATATTTTAG hemK 174753 - 175601 + | protoporphyrinogen oxidase MSC_0152 175610 - 177082 + | hypothetical protein MSC_0153 177091 - 177591 + | hypothetical protein TERM 221 178563 - 178592 + G 70 -7.3 -3.69809 | opp_overlap 178563 178560, overlap 178559 178570 ATGTAAGACAAAGCA CAACTAATTTAGA AGCA TCTAAGTTTGTTG TTCCTTTATTAAATA MSC_0154 177680 - 178618 + | hypothetical protein TERM 222 178625 - 178648 + F 73 -5.4 -4.79053 | opp_overlap 178627 178630, overlap 178627 178633 TTAAAATAATGACTA AATAACTACT ACAT AGTAGTTATC TTTATTTTGGTATTT TERM 223 178646 - 178627 - f 75 -8 -3.91642 | opp_overlap 178625 178627 178633, overlap 178630 AAAATAATGACTAAA TAACTACT ACAT AGTAGTTA TCTTTATTTTGGTAT TERM 224 178627 - 178646 + F 75 -8 -3.98052 | opp_overlap 178627 178630, overlap 178625 178633 AAAATAATGACTAAA TAACTACT ACAT AGTAGTTA TCTTTATTTTGGTAT TERM 225 178786 - 178809 + F 79 -4.8 -5.626 | gap 1, opp_overlap 178786 ATAACTTTCATTAAA TAGG-TTTATT TCA AATAAAGCCTA TTTTTTTATAAAATA MSC_0155 178847 - 179554 + | hypothetical protein TERM 226 179875 - 179863 - g 72 -4.9 -4.94262 | GAGATTAAAAATAAA CATTT AGA AAATG AATTAGAACAAATCG cls 179554 - 181083 + | cardiolipin synthetase TERM 227 181076 - 181102 + F 73 -5.4 -4.88485 | opp_overlap 181087, overlap 181074 ACATTATTCAACCTT TATTATAAAAAT TTT ATTTTTAAAATA TTATTTTTTTAATTA rpsL 181207 - 181626 + | 30S ribosomal protein S12 rpsG 181713 - 182180 + | 30S ribosomal protein S7 fusA 182205 - 184274 + | elongation factor G TERM 228 184340 - 184325 - f 91 -8.2 -4.9181 | overlap 184326 ATATAATAGTAAAAA CGCCCC AAAA GGGGCA GACAAAATAGTAGAA TERM 229 184339 - 184326 - f 83 -9.5 -3.53459 | overlap 184325 TATAATAGTAAAAAC GCCCC AAAA GGGGC AGACAAAATAGTAGA tufA 184406 - 185593 + | elongation factor Tu TERM 230 185615 - 185633 + F 100 -5.3 -6.20267 | opp_overlap 185615 185618 AAATAATTTATAAAA GGACTAG TTATT CTAGTTC TTTTTTTGTTTTTAA TERM 231 185867 - 185844 - g 72 -8.4 -3.14132 | opp_overlap 185843 185847, overlap 185847 CTGCGGCTGGACTAA CAATTATTTT AGGA AAAATAATTG GTCCATTAAGGCTAG TERM 232 186222 - 186236 + G 71 -7.2 -3.97388 | GAATTATAATGGGAT TTGTTG GTG CAACAA TTTATAATAACGTAT ptsG 185729 - 186262 + | PTS system, glucose-specific IIBC component xylS 187584 - 189854 + | alpha-xylosidase or alpha-glucosidase pepA 190007 - 191362 + | leucyl aminopeptidase TERM 233 191399 - 191415 + F 70 -3.1 -5.40072 | AGTATTTATCTACCC TTTTTAT ATT ATGAAAA TTTTTTTAAAAAAAG TERM 234 192699 - 192679 - g 70 -6.3 -4.20531 | opp_overlap 192670 192681 TAGAGTTATTTAAAA TATTAGTAA AAA CTACTAATA TTAAAAAAGGATTTG MSC_0164 192615 - 193046 + | hypothetical protein TERM 235 193499 - 193487 - g 72 -6.3 -4.44974 | TCAAATTCTATAAAA CAAGA ACA TCTTG AAAATATAGTTTCAG MSC_0165 193136 - 193753 + | hypothetical protein TERM 236 193750 - 193764 + T 73 -5.7 -4.89562 | opp_overlap 193750, overlap 193745 ATTAAAATTTTACAA CTAGC TTTTT GCTAG TTTTATTACTTTTAA TERM 237 193830 - 193888 + T 90 -12.3 -2.99123 | gap 4, overlap 193838 TTTTAATCTTATCCT ---ACGTTTCCCACTTAGTCGCTGAAAAC TGAGT GTTTTC-GCGACTAAGTGGGAAACGTAGG ATTAATTTTTATTTT TERM 238 193918 - 193930 + T 70 -3.5 -5.33405 | TAAATTTTTAATTAC TATTT TAT AAATA TTTTTATTTGCTAAA MSC_0166 194562 - 193897 - | methyltransferase TERM 239 194161 - 194146 - G 70 -4.8 -4.7889 | opp_overlap 194146 ATAAATATCTAAAAA TTTAAC ATAA GTTAAA CGTTTTTTATAATGT mgtE 195967 - 194564 - | Mg2+ transporter TERM 240 196017 - 196001 - H 76 -2.4 -5.97979 | ATAATAACAAAAAAA TAAAAT TATCT ATTTTA AGTTATAAAGCTAAA TERM 241 196539 - 196555 + H 100 -8 -5.72622 | opp_overlap 196539 CAAGAAAAGTAACTA GGCTTG TTAAT CAAGCC TTTTTTATTTGTAAA TERM 242 196597 - 196631 + H 75 -3.8 -5.60993 | gap 2, overlap 196598 196627 196628 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 243 196598 - 196629 + H 86 -8.9 -4.45201 | gap 1, overlap 196597 196627 196628 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 244 197137 - 197109 - g 91 -8.3 -5.04356 | opp_overlap 197117, overlap 197099 197114 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 245 197132 - 197114 - g 79 -9 -3.48824 | opp_overlap 197117, overlap 197109 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 196693 - 198366 + | IS1634BZ transposase TERM 246 198395 - 198385 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 247 198464 - 198480 + F 100 -8 -5.72622 | opp_overlap 198464 CGTAGGAAGTAACTA GGCTTG TTAAT CAAGCC TTTTTTATTTGTAAA TERM 248 198978 - 198963 - f 84 -4.8 -5.71983 | TGAATTAGAAAAAAA TATCTA ACTT TAGATA ATGAAAATGAGACTG TERM 249 199447 - 199435 - g 74 -6.3 -4.67982 | overlap 199438 CTTTAGTTAATAAAA GTACA GTA TGTAC TGAGTATGCTAAGGG MSC_0169 199353 - 199778 + | hypothetical protein MSC_0170 199836 - 200363 + | hypothetical protein TERM 250 200590 - 200580 - g 78 -5.4 -5.14163 | overlap 200563 AGTTATTAATAAAAA CTCA CAA TGAG AAAATATTATTAGTA TERM 251 200681 - 200665 - g 79 -8.1 -4.08578 | opp_overlap 200653, overlap 200653 200668 AAAGCTAATGATAAA GAATTAG CTT CTAATTC ACATCAAGTTATTAT MSC_0171 200509 - 200703 + | hypothetical protein TERM 252 200881 - 200915 + F 75 -3.8 -5.60993 | gap 2, overlap 200882 200911 200912 ACCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 253 200882 - 200913 + F 86 -8.9 -4.45201 | gap 1, overlap 200881 200911 200912 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 254 201421 - 201393 - g 91 -8.3 -5.04356 | opp_overlap 201401, overlap 201383 201398 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 255 201416 - 201398 - g 79 -9 -3.48824 | opp_overlap 201401, overlap 201393 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 200977 - 202650 + | IS1634BP transposase TERM 256 202679 - 202669 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC tnpA 202677 - 203261 + | IS1296UK transposase TERM 257 204112 - 204068 - g 93 -7.3 -5.64321 | opp_overlap 204069 204072 204074, overlap 204069 204074 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 258 204111 - 204069 - g 95 -10.8 -3.94933 | opp_overlap 204069 204072 204074, overlap 204068 204074 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 259 204106 - 204074 - g 100 -10.7 -4.88326 | opp_overlap 204072 204069 204074, overlap 204069 204068 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA tnpB 203270 - 204130 + | IS1296UK transposase protein B MSC_0175 205010 - 204171 - | hypothetical protein MSC_0176 205615 - 205010 - | hypothetical protein TERM 260 205770 - 205804 + r 93 -10.2 -4.18668 | opp_overlap 205770, overlap 205763 AAAATAATAAAAAAA TGACCAAAAAATGAAA GAA TTTCAATTTATGGTCA TTTGATATTTTTTAA TERM 261 205804 - 205770 - R 100 -10.2 -6.04419 | opp_overlap 205770 205763 AAAATAATAAAAAAA TGACCAAAAAATGAAA GAA TTTCAATTTATGGTCA TTTGATATTTTTTAA lppC 207120 - 205816 - | prolipoprotein C TERM 262 207213 - 207175 - R 86 -5.7 -5.80817 | gap 2, opp_overlap 207187 TTTAATACAAAAAAA CAAGACCTAA-T-ATTGTT AAA AACAATTAATTAAGTCTTG ATTTATTAAATATTA alaS 209916 - 207226 - | alanine-tRNA ligase TERM 263 208809 - 208832 + g 73 -2.5 -5.66684 | ATTTTTCTTCTTCAT CTTTAATAG TTTGTT CTACTAAAG TTTTTTTATCAATTA MSC_0179 210482 - 209988 - | hypothetical protein TERM 264 210633 - 210664 + H 78 -6.2 -4.91573 | gap 1, opp_overlap 210638 210641, overlap 210638 AGCACTATATTTCTA GTAAA-TAAGTTAAT TTG ATTAACTTATTTTGC TTTTTAATATATTTT TERM 265 210638 - 210658 + H 88 -8.5 -4.80167 | opp_overlap 210638 210641, overlap 210633 TATATTTCTAGTAAA TAAGTTAAT TTG ATTAACTTA TTTTGCTTTTTAATA TERM 266 210658 - 210638 - H 76 -8.5 -3.74251 | opp_overlap 210638 210633, overlap 210641 TATATTTCTAGTAAA TAAGTTAAT TTG ATTAACTTA TTTTGCTTTTTAATA oppB 210699 - 211943 + | oligopeptide ABC transporter, permease component oppC 211959 - 212969 + | oligopeptide ABC transporter, permease component I TERM 267 213389 - 213355 - g 79 -8.8 -3.79747 | opp_overlap 213364 213367 213388, overlap 213358 213364 213367 TTAGCTATTATTAAA GAATTAAAAGAATCAA CTA TTGAATCTTTAAATTC AAAAATTGATGACTT oppD 212983 - 214683 + | oligopeptide ABC transporter, ATP-binding component oppF 214673 - 216553 + | oligopeptide ABC transporter, ATP-binding component TERM 268 217862 - 217848 - g 70 -2.8 -5.45802 | opp_overlap 217848 GTTTTAAAACAAAAA CCAACT ACT ACTTGG GCTTTTGGATTTAAT TERM 269 218356 - 218334 - g 81 -10.7 -2.64616 | GTGTCATCTACATCA TCTTCAGCA AGTAA TGCTGAAGA AAAATCATGAAGTGA TERM 270 218794 - 218770 - g 76 -5.9 -4.84914 | ATCTATATAAGAAAA TTAACTTGT TAAAAAG ACAAGTTAA AGAAGATCTAGAAAA oppA 216570 - 219713 + | oligopeptide ABC transporter, substrate-binding component TERM 271 219723 - 219740 + F 88 -4.9 -5.93809 | opp_overlap 219723 AAATAATTTTAAAAA CAATACT TTAA GGTATTG TTTTTTTTATAAAAA MSC_0185 219986 - 220579 + | restriction endonuclease TERM 272 220579 - 220568 - f 78 -4.4 -5.47821 | opp_overlap 220568, overlap 220576 AGTTATGTAAAAAAA CTAC AGGA GTAG ATTTACTAAATATAC TERM 273 221990 - 221978 - g 77 -4.9 -5.34365 | opp_overlap 221978, overlap 221985 TCAGAACAACAAAAA GAAAA ACT TTTTC ATTATTTAAAGAAAA MSC_0186 220595 - 222583 + | DNA methylase TERM 274 222766 - 222782 + F 73 -2.3 -5.79595 | opp_overlap 222758 AACCATATCAAAAAA CGTTATT TTA GATAATG TTTTTTGTTTTACAC TERM 275 222816 - 222800 - f 72 -8 -3.48276 | opp_overlap 222800 TTTTGTTTTACACAA GCAACC ACTTA GGTTGC TTTTTTCATTTTTTC TERM 276 222800 - 222816 + F 100 -8 -5.59502 | opp_overlap 222800 TTTTGTTTTACACAA GCAACC ACTTA GGTTGC TTTTTTCATTTTTTC TERM 277 223104 - 223137 + G 80 -6.2 -5.1285 | opp_overlap 223100 223104 223112, overlap 223103 AGCATTTAAAACAAT TGCAATAATAGCAG CTGCTA TTGCTATTATTTCA TTTATTTTCTTTTTT MSC_0187 222889 - 224055 + | hypothetical protein TERM 278 224543 - 224533 - g 79 -4 -5.80951 | overlap 224537 224538 ATTGAAAAGAAAAAA TCAA CTC TTGA AAAATTCAAAGAAAA MSC_0188 224113 - 224874 + | hypothetical protein MSC_0189 224874 - 225335 + | hypothetical protein TERM 279 225401 - 225372 - f 84 -9.5 -3.67564 | AAGCATTCATTTAAA GGTATATCAAAAT ATAC ACCTTGATATACC TATAGAAAGGAATAT MSC_0190 225417 - 225938 + | hypothetical protein TERM 280 227992 - 227980 - g 77 -4.9 -5.34309 | ACTATCAAATAAAAA TACTA TTT TAGTA ATTGATGAAGCACAC trsE 225944 - 228388 + | transfer complex protein TrsE fic 228516 - 229436 + | hypothetical protein MSC_0193 229426 - 229566 + | hypothetical protein TERM 281 229604 - 229582 - f 80 -6.4 -5.0916 | opp_overlap 229574 229582 TTTTTAATATAAAAA GACTAGAA TATAAAT TTCTAGTC TTTTTTATGTTTAAA TERM 282 229582 - 229604 + F 88 -6.4 -5.56264 | opp_overlap 229582, overlap 229574 TTTTTAATATAAAAA GACTAGAA TATAAAT TTCTAGTC TTTTTTATGTTTAAA TERM 283 229656 - 229640 - f 100 -9.5 -5.95286 | ATTAAAAACAAAAAA GAAACCT ATA AGGTTTC TGCATAACAAGTAGT MSC_0194 229715 - 230290 + | putative prophage protein (ps3) TERM 284 230315 - 230335 + T 80 -3.3 -5.95449 | CAGTTTAATTCCAAA CTAGTATTT TAA AAGAACTAG TTTTTTATTTTCTTT TERM 285 230566 - 230535 - T 100 -8.9 -6.02919 | opp_overlap 230535 TTACAAACAAAAAAA TAGTGCTATTAGA TTTAAT TCTATTAGCACTA TTTTTATTTCATTTA TERM 286 230535 - 230566 + T 100 -8.9 -5.41941 | opp_overlap 230535 TTACAAACAAAAAAA TAGTGCTATTAGA TTTAAT TCTATTAGCACTA TTTTTATTTCATTTA MSC_0195 231968 - 230814 - | hypothetical protein TERM 287 231822 - 231791 - G 70 -7.6 -3.34517 | opp_overlap 231790 ATGTGCCTTTAAATA TTTTGCTATTATTT TTAG AAATAATATCAAAA GTGTAATTTTTAATA MSC_0196 233288 - 232002 - | hypothetical protein TERM 288 233315 - 233338 + r 73 -2.6 -5.72118 | overlap 233303 CGTCTTTTATATCAT TAAAAGTT TTTGGGTC AACTTTTA TTTTTTCTATTTTTT MSC_0197 235185 - 233536 - | hypothetical protein TERM 289 233797 - 233807 + gr 79 -4 -5.64421 | opp_overlap 233797 AATTTTAATATTAAA TTGA TAG TCAA TTTTTTGTTTACGCT MSC_0198 235820 - 235137 - | hypothetical protein TERM 290 235906 - 235890 - R 100 -8 -5.56112 | opp_overlap 235890 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 291 235890 - 235906 + r 72 -8 -3.48276 | opp_overlap 235890 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 292 236120 - 236147 + r 80 -6.4 -5.07107 | ATTTTGCCTTCTTAG GTATATCAAGGT GTAT AACTTGATGTAC TTTTTTAAGAGTTTA MSC_0199 236583 - 236188 - | hypothetical protein mod 237255 - 236587 - | adenine-specific DNA-methyltransferase MSC_0201 238059 - 237256 - | hypothetical protein MSC_0202 238551 - 238138 - | hypothetical protein TERM 293 238571 - 238598 + r 88 -8.6 -4.82548 | opp_overlap 238581 AAATCCTTTCTATAG GTATATCAAGGT ATAT AACTTGATATAC TTTTGTATGTTTTTA MSC_0203 239321 - 238611 - | hypothetical protein TERM 294 239285 - 239301 + g 72 -8 -3.48276 | opp_overlap 239285 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 295 239301 - 239285 - G 100 -8 -5.56112 | opp_overlap 239285 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 296 239500 - 239490 - R 76 -2.6 -5.85178 | AATATTTAAAAAAAA TTAT TCT ATAA AAAACCAAGATTTAA TERM 297 239503 - 239525 + r 86 -7.8 -4.89605 | opp_overlap 239505, overlap 239505 AATTATTCTATAAAA AACCAAGATT TAA AATCTTGGTA TTTATTCTTTTTTTA TERM 298 239523 - 239505 - R 100 -10.4 -5.26316 | opp_overlap 239505 239503 TTATTCTATAAAAAA CCAAGATT TAA AATCTTGG TATTTATTCTTTTTT TERM 299 239505 - 239523 + r 95 -10.4 -3.99602 | opp_overlap 239505, overlap 239503 TTATTCTATAAAAAA CCAAGATT TAA AATCTTGG TATTTATTCTTTTTT MSC_0204 239779 - 239555 - | hypothetical protein MSC_0205 240468 - 239887 - | hypothetical protein MSC_0206 240880 - 240605 - | hypothetical protein MSC_0207 241524 - 241180 - | hypothetical protein MSC_0208 242083 - 241598 - | hypothetical protein TERM 300 241635 - 241659 + g 75 -3.7 -5.47821 | TTCTCAAGCAAGTAA CTTATTAAAAT TAG ATTTAGATAAG TTTTTTTAAATGAAT TERM 301 242097 - 242124 + r 88 -8.6 -4.80289 | ATTTGTCCTTTCTAG GTATATCAAGGT GTAT AACTTGATATAC TTTTGTATGTTTTAT MSC_0209 243428 - 242136 - | prolipoprotein TERM 302 242892 - 242911 + g 73 -6.6 -4.35353 | TGAATTTAAATGTTT TTGATTAT CTAT ATAATCAA TTGTTCTTTTTAATT TERM 303 243446 - 243481 + r 85 -10.1 -3.14581 | opp_overlap 243450, overlap 243444 243444 243442 243446 243454 TTTAACTTTTTTGTA TATATCAGGATATAT ATTTTG ATATATCTTGATATA TCTATTGCTCAGTTA MSC_0210 243614 - 243483 - | hypothetical protein TERM 304 243686 - 243702 + r 72 -8 -3.48276 | opp_overlap 243686 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 305 243702 - 243686 - R 100 -8 -5.56112 | opp_overlap 243686 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 306 243744 - 243713 - R 82 -9 -4.07568 | opp_overlap 243712 243723, overlap 243723 GTTGCTTGTGTAAAA CAAAAAACATTATC TAAA AATAACGTTTTTTG ATATGGTTTCAATTC TERM 307 244151 - 244195 + r 93 -7.3 -5.64321 | opp_overlap 244152 244155 244157, overlap 244152 244157 AAATTTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 308 244152 - 244194 + r 95 -10.8 -3.94933 | opp_overlap 244152 244155 244157, overlap 244151 244157 AATTTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 309 244157 - 244189 + r 100 -10.7 -4.88326 | opp_overlap 244155 244152 244157, overlap 244152 244151 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT tnpB 244993 - 244133 - | IS1296JI transposase protein B TERM 310 245862 - 245847 - H 70 -3.4 -5.42605 | overlap 245856 TTAATAAAAATAAAA TTATTA AAAC TAATAA ATTAGAAAAAATAAT TERM 311 246637 - 246617 - H 87 -7 -5.16206 | opp_overlap 246617 246616 AAAGTAATAGAAAAA CATCTATT TTATC AATAGATG ATTTTTGGCGTCATT TERM 312 247431 - 247415 - g 82 -9.5 -3.41961 | opp_overlap 247408 ACTATTATTAATCAA GTTGGAT CAT ATCCAAC TGAACTATCTAATAA TERM 313 247998 - 247973 - g 73 -7.7 -3.79995 | GCAATGAGAAGAGAA GGTTTTGAACT AGCA ATTTCAAAACC AGAAGTAATTTTTCA MSC_0214 246809 - 248662 + | elongation factor Tu family protein TERM 314 248654 - 248674 + T 73 -3.3 -5.55695 | opp_overlap 248657 248659, overlap 248657 248659 CAACACAGAAACGAT AAATACTAG TTT CTAGTGTTA TTTTTTGTATTATTA TERM 315 248657 - 248671 + T 70 -5 -4.80737 | opp_overlap 248657 248659, overlap 248654 248659 CACAGAAACGATAAA TACTAG TTT CTAGTG TTATTTTTTGTATTA sau96I-like 249458 - 248694 - | type II site-specific deoxyribonuclease (Sau96I-li dcm 250476 - 249451 - | cytosine-specific DNA-methyltransferase Sau96I TERM 316 249596 - 249573 - G 71 -5.4 -4.56597 | opp_overlap 249573 249574, overlap 249574 TTGTTCCTTTAAAAA CTCAATCATC TGGA AATGATTGAA TTCTTGCATTTTCTC sun 251767 - 250469 - | Sun family protein gmk 252623 - 251730 - | guanylate kinase MSC_0219 253198 - 252626 - | DNA methylase TERM 317 252817 - 252841 + g 70 -5.1 -4.87626 | opp_overlap 252817, overlap 252810 CTATTTGTTTAAAAG GTGGATCTA AATATAC TAGATCTAC TTTTTGATGTTGAAC pdf 253257 - 253859 + | peptide deformylase TERM 318 253851 - 253835 - f 75 -5.3 -4.96848 | opp_overlap 253835 253838 253849, overlap 253846 253849 CCCTTTATATAAAAA TAATAAT TGA ATTATTA TTGAATAAATTTAGA infC 254049 - 254594 + | translation initiation factor IF-3 rpmI 254620 - 254811 + | 50S ribosomal protein L35 TERM 319 255171 - 255161 - g 75 -4 -5.54192 | AGGAATTCAAAAAAA TTGT TAA ACAA GCTAAAAAAGCTTTA rplT 254830 - 255195 + | 50S ribosomal protein L20 TERM 320 255224 - 255193 - f 72 -6 -4.4448 | opp_overlap 255201, overlap 255201 AAAGCTTTAAATAAA TAATCAAATCTCTC TCAG GAGAGATTTTTTTA TAATTAATGATTTTT TERM 321 255216 - 255201 - f 78 -7.6 -4.2181 | opp_overlap 255201, overlap 255193 AAATAAATAATCAAA TCTCTC TCAG GAGAGA TTTTTTTATAATTAA TERM 322 255201 - 255216 + F 100 -7.6 -5.71983 | opp_overlap 255201 255193 AAATAAATAATCAAA TCTCTC TCAG GAGAGA TTTTTTTATAATTAA TERM 323 255497 - 255512 + F 86 -7.6 -4.90079 | opp_overlap 255497 TCTCTCCCTTAAGTA GAAGTC TAAT GACTTC TTTTGTTGTTAAAAT potA 255560 - 256615 + | spermidine/putrescine ABC transporter ATP-binding component TERM 324 257495 - 257509 + G 73 -6.4 -4.28375 | ATTTTGGATATGGTG CTGCTG TTT CAGTAG TTTTAGCTATCTTAG potB 256615 - 257607 + | spermidine/putrescine ABC transporter permease component TERM 325 257613 - 257601 - g 70 -2.7 -5.52347 | opp_overlap 257602, overlap 257602 AAGAAAATGAAAAAA CTCTT AAA AAGAA GTTATTTTGCTTTTG TERM 326 258396 - 258372 - g 73 -2.3 -5.67711 | overlap 258373 258383 258393 GAAACAAAACAAAAA TTAATTAATAA TAA TTACAAATTAA AAACAATTTCTAAAT potCD 257592 - 260720 + | spermidine/putrescine ABC transporter permease/substrate-binding protein TERM 327 260714 - 260756 + T 79 -3.7 -5.75945 | gap 1, opp_overlap 260722 260727, overlap 260727 TAATTTACTGGCTAA TAAATAGAGAAAACCTTGGA AAAT TCCAAGGTTTTTT-TATACA TTTTTTTTGAAAAAT TERM 328 260749 - 260722 - T 87 -10 -3.41738 | opp_overlap 260714 260727, overlap 260727 TGGCTAATAAATAGA GAAAACCTTGGA AAAT TCCAAGGTTTTT TTATACATTTTTTTT TERM 329 260727 - 260744 + T 100 -9.9 -5.68039 | opp_overlap 260722 260727, overlap 260714 AATAAATAGAGAAAA CCTTGGA AAAT TCCAAGG TTTTTTTATACATTT TERM 330 260744 - 260727 - T 100 -9.9 -4.77778 | opp_overlap 260727 260714, overlap 260722 AATAAATAGAGAAAA CCTTGGA AAAT TCCAAGG TTTTTTTATACATTT MSC_0227 261320 - 261066 - | hypothetical protein MSC_0228 262030 - 261365 - | hypothetical protein TERM 331 262126 - 262105 - R 90 -6 -5.90231 | opp_overlap 262105 AGAAACACAAAAAAA CAATTTCT TTTTTT AGAAATTG TTTTAACTAAATATT TERM 332 262105 - 262126 + r 70 -6 -4.20932 | opp_overlap 262105 AGAAACACAAAAAAA CAATTTCT TTTTTT AGAAATTG TTTTAACTAAATATT chrA 263285 - 263022 - | chromate transporter TERM 333 263465 - 263509 + H 93 -7.3 -5.64321 | opp_overlap 263466 263469 263471, overlap 263466 263471 AAAATTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 334 263466 - 263508 + H 95 -10.8 -3.94933 | opp_overlap 263466 263469 263471, overlap 263465 263471 AAATTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 335 263471 - 263503 + H 100 -10.7 -4.88326 | opp_overlap 263471 263469 263466, overlap 263466 263465 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT TERM 336 263657 - 263676 + H 88 -6.5 -5.49809 | opp_overlap 263641 263656 263659 AAATTTTCTTAAATT TAGAGCT AAAAAA AGCTCTA TTTTTTTCCAATTTC TERM 337 264627 - 264599 - g 73 -5.5 -4.8543 | opp_overlap 264608 264611, overlap 264619 TAATCCCTATAAAAA TAAATCATACTTT TAA AAAGTTTAATTTA AAATCTGGATTTAAT TERM 338 265046 - 265029 - g 73 -3.5 -5.55769 | gap 1, overlap 265033 TTGCAGAATAAAAAA CCACCTAT TAA ATAG-TGG CGTTCTTGACAATAG tnp 263779 - 265191 + | transposase ISMmy1B tnpA 266533 - 265991 - | IS1296PX transposase protein A TERM 339 267394 - 267380 - g 81 -5.8 -5.42605 | CGAAGAAAAACAAAA GTATTT AAA AAATAC AGTTGATGAAACATA MSC_0233 266781 - 267812 + | hypothetical protein TERM 340 268351 - 268339 - g 70 -3.4 -5.27477 | opp_overlap 268339 ATGGTAATTAAAAAA GATC AAAAA GATC TATTTAGAAAATTAA MSC_0234 268198 - 268470 + | hypothetical protein pepA 268611 - 269552 + | leucyl aminopeptidase MSC_0236 269568 - 270251 + | hypothetical protein pepF 270251 - 272041 + | oligoendopeptidase F tnpA 272114 - 272599 + | IS1296FJ transposase protein A TERM 341 273507 - 273463 - g 93 -7.3 -5.64321 | opp_overlap 273464 273467 273469, overlap 273464 273469 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 342 273506 - 273464 - g 95 -10.8 -3.94933 | opp_overlap 273464 273467 273469, overlap 273463 273469 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 343 273501 - 273469 - g 100 -10.7 -4.88326 | opp_overlap 273467 273464 273469, overlap 273464 273463 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA tnpB 272665 - 273525 + | IS1296FJ transposase protein B TERM 344 274852 - 274838 - g 72 -3.6 -5.40474 | overlap 274839 AGGTTTTTAAAAAAA CTTGTT GAT AACAAA ATTTTAAAAACCATA p72 273632 - 275296 + | immunodominant protein P72 precursor TERM 345 275329 - 275298 - T 76 -9.6 -2.86338 | opp_overlap 275303, overlap 275303 AGTTAGATCAATAAT CAAAACAAGAGACC ATAT GATCTCTTGTTTTT TTATACTTCTTTTCC TERM 346 275324 - 275303 - T 93 -9.5 -4.5774 | opp_overlap 275303, overlap 275298 GATCAATAATCAAAA CAAGAGACC ATAT GATCTCTTG TTTTTTTATACTTCT TERM 347 275303 - 275324 + T 93 -7.3 -5.73339 | opp_overlap 275303 275298 GATCAATAATCAAAA CAAGAGACC ATAT GATCTCTTG TTTTTTTATACTTCT MSC_0241 276211 - 275330 - | hypothetical protein TERM 348 276354 - 276341 - H 72 -3.8 -5.4505 | opp_overlap 276341 GGTTCGAATAAAAAA GGTG GAAATA CACC TTAATTATTCGCAGA MSC_0242 276514 - 276828 + | hypothetical protein TERM 349 277703 - 277682 - g 83 -7.5 -4.68451 | opp_overlap 277687, overlap 277700 AAAAAGAACAAGAAA TTAATTCTT TATT AAGAATTAA AGATAACTTTAAAAA MSC_0243 276946 - 277824 + | hypothetical protein TERM 350 277826 - 277852 + F 89 -9.6 -4.29977 | opp_overlap 277833, overlap 277833 TAATAGATATTTAAT AAAAAAACAGCT TTA AGCTGTTTTTTG TTTATTCCCTTATTT TERM 351 277845 - 277833 - f 100 -7.7 -5.8187 | opp_overlap 277826 277833 TATTTAATAAAAAAA CAGCT TTA AGCTG TTTTTTGTTTATTCC TERM 352 277833 - 277845 + F 100 -7.7 -5.80003 | opp_overlap 277833, overlap 277826 TATTTAATAAAAAAA CAGCT TTA AGCTG TTTTTTGTTTATTCC TERM 353 278334 - 278368 + F 75 -3.8 -5.60993 | gap 2, overlap 278335 278364 278365 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 354 278335 - 278366 + F 86 -8.9 -4.45201 | gap 1, overlap 278334 278364 278365 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 355 278874 - 278846 - g 91 -8.3 -5.04356 | opp_overlap 278854, overlap 278836 278851 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 356 278869 - 278851 - g 79 -9 -3.48824 | opp_overlap 278854, overlap 278846 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 278430 - 279950 + | IS1634AC transposase TERM 357 280134 - 280124 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 358 281438 - 281394 - g 93 -7.3 -5.64321 | opp_overlap 281395 281398 281400, overlap 281395 281400 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 359 281437 - 281395 - g 95 -10.8 -3.94933 | opp_overlap 281395 281398 281400, overlap 281394 281400 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 360 281432 - 281400 - g 100 -10.7 -4.88326 | opp_overlap 281400 281398 281395, overlap 281395 281394 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA tnpB 280596 - 281456 + | IS1296OD transposase protein B MSC_0247 281838 - 282014 + | hypothetical protein TERM 361 282536 - 282505 - T 87 -4 -6.17669 | gap 1, opp_overlap 282492 282505, overlap 282492 AATAAAATAAAAAAA CTGAACTAACAAA ATAAAGA TTTGTTA-TTCAG TTTTTTGTATTATAC TERM 362 282505 - 282536 + T 75 -4 -5.5208 | gap 1, opp_overlap 282505 282492, overlap 282492 AATAAAATAAAAAAA CTGAACTAACAAA ATAAAGA TTTGTTA-TTCAG TTTTTTGTATTATAC murQ 283454 - 282546 - | N-acetylmuramic acid-6-phosphate etherase TERM 363 284078 - 284112 + H 75 -3.8 -5.60993 | gap 2, overlap 284079 284108 284109 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 364 284079 - 284110 + H 86 -8.9 -4.45201 | gap 1, overlap 284078 284108 284109 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 365 284618 - 284590 - g 91 -8.3 -5.04356 | opp_overlap 284598, overlap 284580 284595 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 366 284613 - 284595 - g 79 -9 -3.48824 | opp_overlap 284598, overlap 284590 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 284174 - 285847 + | IS1634AG transposase TERM 367 285876 - 285866 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC pts 287050 - 285917 - | PTS system, sucrose-specific IIC component (trunca TERM 368 286573 - 286584 + g 73 -5.8 -4.74103 | opp_overlap 286567 286573 ATCATGAAACAACTA CAGC TGGT GCTG TTTTTAAATTAACAG gntR 288005 - 287169 - | transcription regulator gntR TERM 369 287288 - 287274 - G 87 -7.2 -5.20331 | AAATAATAAAGAAAA TCTACT AGT AGTAGA AACTAAACGATCAAT MSC_0252 288209 - 288006 - | hypothetical protein eno 288393 - 289748 + | phosphopyruvate hydratase TERM 370 289769 - 289796 + F 89 -8.7 -4.65916 | opp_overlap 289758 289776, overlap 289776 GCAATTAAATAATTT TAAAAAAGAGT CTAGTC ACTCTTTTTTA TTTTGTTAAAATAAC TERM 371 289776 - 289789 + F 76 -2.4 -5.92399 | opp_overlap 289776, overlap 289769 AATAATTTTAAAAAA GAGT CTAGTC ACTC TTTTTTATTTTGTTA MSC_0254 289815 - 290636 + | hypothetical protein MSC_0255 290638 - 291069 + | hypothetical protein hpt 291075 - 291647 + | hypoxanthine phosphoribosyltransferase TERM 372 291655 - 291671 + T 100 -10.9 -5.47821 | opp_overlap 291655 AATGATAATAAAAAA GCTCATC ATT GATGAGC TTTTTTTGACTAAGT TERM 373 291671 - 291655 - T 100 -10.9 -5.59534 | opp_overlap 291655 AATGATAATAAAAAA GCTCATC ATT GATGAGC TTTTTTTGACTAAGT glpF 292471 - 291692 - | glycerol uptake facilitator glpK 294024 - 292507 - | glycerol kinase TERM 374 293638 - 293620 - G 74 -9 -3.08211 | opp_overlap 293618 293617, overlap 293617 AGTTCCTGAAAAGTA TGGATTAA TTA TTAATCCA GATCTTTGTTTTACC TERM 375 294052 - 294067 + r 72 -6.2 -4.50661 | overlap 294041 TGTACTATTTTCATG GAAGAA TAGC TTCTTC TTTTGGTTGTCAATT glpO 295219 - 294041 - | glycerol-3-phospate oxidase TERM 376 294950 - 294960 + g 71 -5.4 -4.57304 | opp_overlap 294950, overlap 294946 ATCAATTCTTAGATA TGGA AAA TCCA TTTCTTTGATTCAGT TERM 377 295453 - 295478 + G 100 -7.7 -5.60689 | opp_overlap 295453 TAAAATAGGTTCAAA GTATACCTTTA CAAT TAGGGGTATAC TTTTTTGTTATATAA pfk 295427 - 296518 + | 6-phosphofructokinase pyk 296590 - 298026 + | pyruvate kinase TERM 378 298273 - 298252 - f 75 -8.1 -3.54424 | gap 1, opp_overlap 298252 TGGTACCGCGTTAAA TCGCTCC-TA AAT TAGGGAGCGA TTTTTTTATAAGGAG TERM 379 298252 - 298273 + F 100 -8.1 -5.60993 | gap 1, opp_overlap 298252 TGGTACCGCGTTAAA TCGCTCC-TA AAT TAGGGAGCGA TTTTTTTATAAGGAG thrS 298293 - 300212 + | threonine-tRNA ligase TERM 380 300248 - 300229 - f 83 -9.4 -3.58565 | opp_overlap 300229 TAAATAATATTAGAA CTTGCAAA TAAT TTTGCAAG TTTTTTATTTGTAAT TERM 381 300229 - 300248 + F 100 -9.4 -5.73978 | opp_overlap 300229 TAAATAATATTAGAA CTTGCAAA TAAT TTTGCAAG TTTTTTATTTGTAAT nox 300886 - 302250 + | NADH oxidase lplA 302253 - 303257 + | lipoate protein ligase TERM 382 303793 - 303767 - g 70 -3.7 -5.1634 | ATAAATATAGAAAAA CAGGAGGAGTT GTTGT AACTACTACTG GAGATGGTGGATCTA pdhA 303301 - 304413 + | pyruvate dehydrogenase (lipoamide), alpha chain TERM 383 305293 - 305278 - g 70 -7.6 -3.40043 | overlap 305277 TTGAATACATAAAAG CACCTT TATC AAGGTG TACAGGTTATGATGT pdhB 304413 - 305402 + | pyruvate dehydrogenase (lipoamide), beta chain pdhC 305431 - 306717 + | branched-chain alpha-keto acid dehydrogenase subunit E2 pdhD 306736 - 308523 + | dihydrolipoamide dehydrogenase pta 308545 - 309513 + | phosphate acetyltransferase ackA 309526 - 310707 + | acetate kinase TERM 384 310726 - 310748 + F 100 -13.6 -4.02719 | opp_overlap 310726 ATATAATAATTAAAA CACTTAGCTT AAA AAGCTAAGTG TTTACTATTTAATAA TERM 385 310748 - 310726 - f 100 -13.6 -4.60317 | opp_overlap 310726 ATATAATAATTAAAA CACTTAGCTT AAA AAGCTAAGTG TTTACTATTTAATAA lpp 310777 - 312732 + | prolipoprotein kdtB 312742 - 313164 + | pantetheine-phosphate adenylyltransferase TERM 386 313805 - 313783 - g 73 -2.1 -5.72053 | opp_overlap 313783 313786 CAATTAAATAAAAAA TTTGTTAAA GGATT TTTAACTAA TGTTGGTGGAAGAAC ptsI 313258 - 314979 + | phosphoenolpyruvate-protein phosphotransferase MSC_0275 315645 - 315178 - | hypothetical protein crr 315059 - 315523 + | PTS system, glucose-specific IIA component TERM 387 315801 - 315819 + FH 90 -6.8 -5.68438 | opp_overlap 315801 315804 TAATAATTGGAATAA TAGCTCTA TTT TAGAGTTA TTTTTTGTTTAATAG dhaK2 315887 - 316513 + | glycerone kinase MSC_0277 316500 - 316916 + | hypothetical protein TERM 388 316946 - 316914 - T 82 -8.8 -4.13421 | gap 1, opp_overlap 316914 316916 316922, overlap 316922 AATAAAATAGAAGAA TAA-AAAAATCAAGC TTAA GCTTGATTTTTATTA TGGGTTTTTAATTTT TERM 389 316914 - 316946 + T 73 -8.8 -2.91298 | gap 1, opp_overlap 316914 316922, overlap 316916 316922 AATAAAATAGAAGAA TAA-AAAAATCAAGC TTAA GCTTGATTTTTATTA TGGGTTTTTAATTTT TERM 390 316916 - 316943 + T 75 -8.6 -3.56762 | opp_overlap 316914 316922, overlap 316914 316922 TAAAATAGAAGAATA AAAAAATCAAGC TTAA GCTTGATTTTTA TTATGGGTTTTTAAT TERM 391 316937 - 316922 - T 100 -7.6 -5.97979 | opp_overlap 316916 316914 316922, overlap 316914 AGAAGAATAAAAAAA TCAAGC TTAA GCTTGA TTTTTATTATGGGTT TERM 392 316922 - 316937 + T 93 -7.6 -5.21236 | opp_overlap 316922 316914, overlap 316916 316914 AGAAGAATAAAAAAA TCAAGC TTAA GCTTGA TTTTTATTATGGGTT rpsD 317587 - 316961 - | 30S ribosomal protein S4 TERM 393 316996 - 317010 + g 70 -7.2 -3.72642 | opp_overlap 316996 TGTATCATTCAACAA TTAGTG ATT CACTAA TTTCACTGCTTAATT TERM 394 317010 - 316996 - G 70 -7.2 -3.69395 | opp_overlap 316996 TGTATCATTCAACAA TTAGTG ATT CACTAA TTTCACTGCTTAATT TERM 395 317891 - 317902 + G 70 -3 -5.54264 | opp_overlap 317891 TAAGTGAAACAAAAG CAAT TAAT ATTG TTTTTTTAACTATTT MSC_0279 317821 - 319629 + | hypothetical protein TERM 396 319923 - 319907 - g 75 -3.7 -5.46129 | GAACAAATTAAAAAA GCAGTTT TAC AAATTGC TAAAAACTCAAAAGC thiI 319637 - 320824 + | thiamin biosynthesis protein TERM 397 321387 - 321367 - g 70 -7.7 -3.41327 | overlap 321361 TAATAAAACTACTAA CTATCAACT AGA AATTGATAG TAAAAATAAAACTAT TERM 398 321996 - 321980 - g 72 -5.9 -4.42287 | GAAACAATTAATAAA GCTGTTT TAA AAACAAC AACACCTAGATCTGA MSC_0281 320957 - 322867 + | hypothetical protein TERM 399 322871 - 322901 + TF 100 -12.9 -5.94743 | opp_overlap 322871 TTAAAAAAATAAAAA TTAACCTTAGTAA AAAAA TTACTAAGGTTAA TTTTTATTTTTTTTA TERM 400 322901 - 322871 - Tf 100 -12.9 -5.86609 | opp_overlap 322871 TTAAAAAAATAAAAA TTAACCTTAGTAA AAAAA TTACTAAGGTTAA TTTTTATTTTTTTTA MSC_0283 324449 - 323430 - | hypothetical protein MSC_0282 322984 - 323802 + | hypothetical protein TERM 401 323857 - 323845 - Gf 72 -4.9 -5.01845 | GATAATAATCAAAAA TTAGA AGA TCTAA AAACTAAAAATAATC TERM 402 324238 - 324224 - Gf 70 -3.6 -5.24291 | AAAATCAAAACAAAA TAGCTA GTT TAACTA TTCAAAATAAAGAAT MSC_0284 324436 - 324669 + | hypothetical protein TERM 403 324852 - 324832 - g 71 -5.5 -4.56367 | TAGTTTAGAAACAAA TGTTAATCA ATA TGATGAACA AATTAATAAAACTGA lpp 324680 - 325336 + | prolipoprotein MSC_0286 326510 - 326965 + | hypothetical protein TERM 404 328169 - 328156 - g 80 -3.1 -5.96219 | TATGGAGAAAAAAAA CAAAC TATT GCTTG TTCAGTAGAACCATT MSC_0287 327121 - 329010 + | hypothetical protein TERM 405 329025 - 329015 - g 82 -5.4 -5.54079 | opp_overlap 329015 TTAAAAATTAAAAAA TGAC TCA GTCA CTTACTAATGATGAT TERM 406 329180 - 329168 - g 76 -2.7 -5.88565 | TTCACAACAAAAAAA TGCAA GCT TTACA AGACAAAATTAATTT MSC_0288 329014 - 329262 + | hypothetical protein TERM 407 329305 - 329276 - T 86 -9.5 -4.17109 | opp_overlap 329283, overlap 329283 AATAATTAAAGCAAA TAAAAAATCAAGG TTAT CCTTGATTTTTTT TATCTTCTCTAAGTT TERM 408 329298 - 329283 - T 100 -7.6 -5.74086 | opp_overlap 329283, overlap 329276 AAAGCAAATAAAAAA TCAAGG TTAT CCTTGA TTTTTTTTATCTTCT TERM 409 329283 - 329298 + T 100 -7.6 -6.12328 | opp_overlap 329283 329276 AAAGCAAATAAAAAA TCAAGG TTAT CCTTGA TTTTTTTTATCTTCT ctp 332195 - 329289 - | cation-transporting ATPase TERM 410 330724 - 330746 + g 77 -5 -5.30686 | GTATCATCACTTAAT GAAGTTGAAA GCT TTTTAATTTC TTTTTTGTGAGTATT TERM 411 331232 - 331242 + g 70 -4 -5.11937 | TTTCTAATTTTTTAA CAAT AAC ATTG TTTTTTGCCATTCTT TERM 412 331714 - 331733 + g 72 -7.9 -3.52341 | AATAAACGTAAATCT GCTGGAA CATATT TTCCAGC TTCTAATATTACAAT MSC_0290 332794 - 332204 - | GTPase EngB MSC_0291 333348 - 332788 - | hypothetical protein TERM 413 333234 - 333244 + g 72 -4 -5.41359 | TTTGATCTTTTATTT GATT ATA AATC TTTTTTACTTTGCTT MSC_0292 333928 - 333350 - | hypothetical protein MSC_0293 334620 - 333931 - | hypothetical protein TERM 414 334049 - 334074 + g 72 -7.9 -3.55524 | opp_overlap 334043 334052, overlap 334044 TTATTAAATTTGAAG TTATTATTTAA CATA TTAAATAATAA TTCATTTGCGTAATT MSC_0294 334702 - 335394 + | hypothetical protein MSC_0295 336117 - 335395 - | oxidoreductase TERM 415 336155 - 336136 - R 88 -6.5 -5.61596 | opp_overlap 336134 336136 ACTCCTATAAAAAAA GCTATTG AAATGA CAATAGC TATATTATTTAATGC greA 336633 - 336160 - | transcription elongation factor TERM 416 336769 - 336790 + r 89 -4.6 -6.01369 | opp_overlap 336769 336776 AGCTATTTATTAAGA TTACTAAT AATTAA ATTAGTAA TTTTTTTATTATTTA uvrC 338510 - 336756 - | excinuclease ABC subunit C MSC_0298 339581 - 338520 - | hypothetical protein TERM 417 339646 - 339622 - R 73 -2.3 -5.75599 | gap 1, opp_overlap 339622 TAAATTATAAAAAAA GCTAATTACT ATTTAA AG-AATTAGC TATTTTTTTGTTCTT MSC_0299 341268 - 339646 - | hypothetical protein TERM 418 341384 - 341362 - R 82 -5.7 -5.61596 | opp_overlap 341362 ATTTTTATAAAAAAA GATAAACCA GATTA TGATTTATC TTTTTTAGATTTAGT MSC_0300 343124 - 341373 - | hypothetical protein TERM 419 342131 - 342145 + g 73 -7.8 -3.69068 | overlap 342129 CATGACGTTTTTCAA CTCCAG CAA CTGGGG TATTTGTTAAAATAA MSC_0301 343969 - 343250 - | oxidoreductase MSC_0302 344778 - 343981 - | hypothetical protein TERM 420 344052 - 344069 + g 89 -4.3 -6.02345 | TAAACTTATCTTTAT TTAAATT TAAT AATTTAA TTTTTTTTCTACTTA TERM 421 344870 - 344885 + r 76 -6.2 -4.85267 | opp_overlap 344862 344870 344884, overlap 344884 TAGATAATAAAAAAA TCTCTT TTAA AAGAGA TTTTTAATCATTTGT TERM 422 344885 - 344870 - R 90 -6.2 -5.9218 | opp_overlap 344870 344884, overlap 344862 344884 TAGATAATAAAAAAA TCTCTT TTAA AAGAGA TTTTTAATCATTTGT valS 347507 - 344889 - | valyl-tRNA synthetase TERM 423 347583 - 347568 - R 86 -9 -4.52803 | TATAAAGTTAGAAAA TGCCTC TAGT GAGGCA ATGTAAATAATTATT MSC_0304 348262 - 347594 - | hypothetical protein rpe 348887 - 348210 - | ribulose-phosphate 3-epimerase MSC_0306 349791 - 348889 - | hypothetical protein TERM 424 349591 - 349606 + g 75 -4 -5.59655 | overlap 349593 AACATTTGCAATTTT TGGTCT ATCT AGACTA TTTTTTCTTGGTTTA pkn 350916 - 349801 - | serine/threonine protein kinase MSC_0308 351660 - 351235 - | protein phosphatase MSC_0309 352059 - 351874 - | hypothetical protein MSC_0310 353106 - 352333 - | hypothetical protein TERM 425 353323 - 353296 - g 75 -3.6 -5.46698 | gap 1, opp_overlap 353296, overlap 353297 353298 TTCAAAATCAAAAAA TC-CCTTTTTATA TTT TATTAAAAGGAGA TTTAGGAGCTGGTAA MSC_0311 353205 - 353633 + | hypothetical protein MSC_0312 353635 - 354198 + | hypothetical protein TERM 426 354209 - 354229 + F 95 -8.4 -5.24416 | opp_overlap 354209 TTTAATATAAAAAAA CAAGATGA TTTTT TCATCTTG TTTTTATTCTGATTG TERM 427 354229 - 354209 - f 100 -8.4 -5.80817 | opp_overlap 354209 TTTAATATAAAAAAA CAAGATGA TTTTT TCATCTTG TTTTTATTCTGATTG MSC_0313 354213 - 354524 + | hypothetical protein MSC_0314 356316 - 354475 - | hypothetical protein MSC_0315 359044 - 356930 - | permease TERM 428 359123 - 359138 + H 77 -3.4 -5.66868 | overlap 359111 ATCTTTTTGATCTTT TAAAAA TAAA TTTTTA TTTTTTTCATTAGTT TERM 429 359700 - 359690 - H 70 -4 -5.1287 | opp_overlap 359691 359699, overlap 359691 TGCACATTTAAAAAA TCAA GTA TTGA TCAATAATTGTTCTT TERM 430 360223 - 360233 + G 70 -4 -5.13521 | opp_overlap 360223 ACTGCTTTAACTAGA TCTT CAG AAGA TTTTTTAAATGGTTT TERM 431 360379 - 360403 + G 83 -7.3 -5.0538 | opp_overlap 360372 360379 360375 360391 ATTAACAATAACCAA TCTTTGATTAA ACT TTTATCAAAGA TTTTTTCAACTAAAA MSC_0316 359752 - 362892 + | hypothetical protein lpp 362907 - 363176 + | prolipoprotein TERM 432 363507 - 363487 - g 70 -2.7 -5.51078 | overlap 363489 363506 AAAAGAAAAAGAAAA TATTTTAAA GAT TTTAAAAGA AACTGGCAGTCCCGG MSC_0318 363191 - 363553 + | hypothetical protein TERM 433 363575 - 363609 + T 75 -3.8 -5.60993 | gap 2, overlap 363576 363605 363606 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 434 363576 - 363607 + T 86 -8.9 -4.45201 | gap 1, overlap 363575 363605 363606 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 435 364115 - 364087 - T 91 -8.3 -5.04356 | opp_overlap 364095, overlap 364077 364092 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 436 364110 - 364092 - T 79 -9 -3.48824 | opp_overlap 364095, overlap 364087 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 437 365372 - 365362 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 438 365530 - 365486 - T 93 -7.3 -5.64321 | opp_overlap 365487 365490 365492, overlap 365487 365492 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 439 365529 - 365487 - T 95 -10.8 -3.94933 | opp_overlap 365487 365490 365492, overlap 365486 365492 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 440 365524 - 365492 - T 100 -10.7 -4.88326 | opp_overlap 365490 365487 365492, overlap 365487 365486 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA TERM 441 366552 - 366562 + T 72 -4 -5.31545 | TTCTTTAAACTAGGA CAAA ATA TTTG TTTTTTAGTATTATT MSC_0320 367447 - 366578 - | hypothetical protein MSC_0321 368297 - 367437 - | hypothetical protein MSC_0322 369417 - 368290 - | hypothetical protein abc 370099 - 369395 - | ABC transporter, ATP-binding component (Na+?) abc 371934 - 370102 - | ABC transporter, permease component (Na+?) TERM 442 371171 - 371199 + g 78 -8.4 -3.99374 | opp_overlap 371174, overlap 371174 CTTGATGAATTATTA GAATATTTGACA ACTGA TGTTAAATATTC TTCTTGTTCATCACC MSC_0325 372262 - 372678 + | hypothetical protein TERM 443 373323 - 373310 - f 72 -3.9 -5.28166 | opp_overlap 373310 TAAAATTAATAAAAA TAGTT TATA AACTA ATTTCGTTTGATTTT TERM 444 373587 - 373602 + F 100 -7.6 -5.85425 | opp_overlap 373585 373587 CATTTGAAATTAACA GACTAC TTAG GTAGTC TTTTTTATTTGTTTA TERM 445 373602 - 373587 - f 70 -7.6 -3.33865 | opp_overlap 373587, overlap 373585 CATTTGAAATTAACA GACTAC TTAG GTAGTC TTTTTTATTTGTTTA MSC_0326 373693 - 374373 + | hypothetical protein TERM 446 374982 - 374969 - g 86 -5.3 -5.63236 | ACTGAAAAAGAAAAA TTTGC AGGA GCAAA AGATACTTATACTAT TERM 447 375614 - 375599 - g 70 -6.2 -4.24404 | opp_overlap 375597 375593 375599 ATTGAAATTTTAAAA CAAAAC CAAG GTTTTG TATTAGTTCCATTTT proS 374354 - 375778 + | prolyl-tRNA synthetase TERM 448 375831 - 375821 - g 90 -5.4 -5.8187 | opp_overlap 375821 TATGCAATAAAAAAA GGTT TAA AACC TGGTATTTACACAAC rnh 375791 - 376408 + | ribonuclease H-related protein MSC_0329 376410 - 377297 + | hypothetical protein TERM 449 377331 - 377349 + G 70 -7.6 -3.46144 | opp_overlap 377331 377330, overlap 377330 TTTATATGGATAAAT CTAAAATT AGA AATTTTAG TATTATTGCTCATAT lepA 377321 - 379123 + | GTP-binding protein LepA TERM 450 379940 - 379970 + G 83 -6.2 -5.31519 | opp_overlap 379946, overlap 379941 379946 GATTATATGATGGGA AAAAAAGTAGGGTT TTA GACCCTACTTTTAC TTTTTATTTAACTAT TERM 451 379941 - 379969 + G 84 -9.7 -3.77285 | opp_overlap 379946, overlap 379940 379946 ATTATATGATGGGAA AAAAAGTAGGGTT TTA GACCCTACTTTTA CTTTTTATTTAACTA TERM 452 379946 - 379964 + G 95 -9.6 -4.88326 | opp_overlap 379946, overlap 379941 379940 ATGATGGGAAAAAAA GTAGGGTT TTA GACCCTAC TTTTACTTTTTATTT TERM 453 379964 - 379946 - g 100 -8.9 -5.44721 | opp_overlap 379941 379940 379946 ATGATGGGAAAAAAA GTAGGGT TTTAG ACCCTAC TTTTACTTTTTATTT MSC_0331 379150 - 380007 + | hypothetical protein TERM 454 380048 - 380058 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 381750 - 380077 - | IS1634AW transposase TERM 455 381306 - 381334 + g 91 -8.3 -5.04356 | opp_overlap 381314, overlap 381311 381332 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 456 381311 - 381329 + g 79 -9 -3.48824 | opp_overlap 381314, overlap 381306 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 457 381845 - 381811 - R 70 -3.8 -5.24129 | gap 2, overlap 381792 381791 381813 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGT TERM 458 381844 - 381813 - R 84 -8.9 -4.25873 | gap 1, overlap 381792 381791 381811 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG aspS 383586 - 381862 - | aspartyl-tRNA synthetase hisS 384839 - 383595 - | histidyl-tRNA synthetase rbfA 385024 - 385377 + | ribosome-binding factor A TERM 459 385387 - 385405 + F 83 -7.5 -4.66163 | opp_overlap 385380 AAATAATATTAAATT TCCAAGT TTTAT ACTTGGA TTTTTAAATAGAAAT truB 385427 - 386305 + | tRNA pseudouridine synthase B TERM 460 386802 - 386781 - g 100 -10.3 -6.23317 | ACAAAAATAAAAAAA CTACTAGAT GAAA ATCTAGTAG ATAAAGCTCAAGAAT ribF 386292 - 386846 + | riboflavin kinase TERM 461 386876 - 386839 - f 90 -10.9 -3.16302 | opp_overlap 386844, overlap 386844 GAATAGATCTAAAAT TAAAATAGTACACACTT ATAA AAGTATGTACTATTTTT TATTTTGTCTTCTTT TERM 462 386844 - 386871 + F 100 -8.6 -5.8901 | opp_overlap 386839 386844 GATCTAAAATTAAAA TAGTACACACTT ATAA AAGTATGTACTA TTTTTTATTTTGTCT TERM 463 386871 - 386844 - f 100 -10.8 -4.68645 | opp_overlap 386844, overlap 386839 GATCTAAAATTAAAA TAGTACACACTT ATAA AAGTATGTACTA TTTTTTATTTTGTCT MSC_0338 386864 - 387058 + | hypothetical protein TERM 464 387529 - 387539 + F 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 465 388791 - 388819 + F 91 -8.3 -5.04356 | opp_overlap 388799, overlap 388796 388817 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 466 388796 - 388814 + F 79 -9 -3.48824 | opp_overlap 388799, overlap 388791 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 467 389331 - 389297 - f 75 -3.8 -5.60993 | gap 2, overlap 389277 389276 389299 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 468 389330 - 389299 - f 86 -8.9 -4.45201 | gap 1, overlap 389277 389276 389297 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 469 390480 - 390436 - f 93 -7.3 -5.64321 | opp_overlap 390437 390440 390442, overlap 390437 390442 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 470 390479 - 390437 - f 95 -10.8 -3.94933 | opp_overlap 390437 390440 390442, overlap 390436 390442 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 471 390474 - 390442 - f 100 -10.7 -4.88326 | opp_overlap 390442 390440 390437, overlap 390437 390436 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA TERM 472 391033 - 391067 + F 70 -3.8 -5.24129 | gap 2, overlap 391034 391063 391064 TTCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 473 391034 - 391065 + F 84 -8.9 -4.25873 | gap 1, overlap 391033 391063 391064 TCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 474 391572 - 391544 - g 91 -8.3 -5.04356 | opp_overlap 391552, overlap 391534 391549 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 475 391567 - 391549 - g 79 -9 -3.48824 | opp_overlap 391552, overlap 391544 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 391128 - 392801 + | IS1634BR transposase TERM 476 392831 - 392821 - T 79 -4 -5.69473 | TACATTATAAAAAAA CATA ACT TATG AGATCAAAAATTTAC MSC_0343 393712 - 392843 - | hypothetical protein MSC_0344 394203 - 393922 - | hypothetical protein MSC_0345 395037 - 394228 - | hypothetical protein TERM 477 394689 - 394717 + g 86 -5.6 -5.80003 | gap 1, opp_overlap 394698 GATTTAAAGTTAGAT CAAAAATAACATT TTTA AATGT-ATTTTTG TTTTTTATTTCTTCA TERM 478 395398 - 395419 + r 72 -7.5 -3.61589 | ATTTTTATCAAGTGT TTTAGAATA CTTA TATTCTAAA TTAGTTTCATCTTCA TERM 479 395681 - 395716 + r 100 -11.4 -4.22949 | opp_overlap 395688 ATTTCTATAATATCT TTAAGTAGGTTTAGAT ATTG GTCTAAACCTACATAA TTTATATCTATTATA MSC_0346 396007 - 395681 - | hypothetical protein rpsO 396220 - 396486 + | 30S ribosomal protein S15 TERM 480 396506 - 396541 + F 82 -9.4 -3.32521 | overlap 396510 TCTAAAATATTGACA TTGATACTTTTATATA ATAA TATATAAAGGTATTAA TTATGCAGGTGTAGT TERM 481 396510 - 396537 + F 70 -8 -3.44622 | overlap 396506 AAATATTGACATTGA TACTTTTATATA ATAA TATATAAAGGTA TTAATTATGCAGGTG TERM 482 396635 - 396654 + F 100 -9.4 -5.82172 | opp_overlap 396627 396635 396638 TTGAAAATAACTCAA CAACACTT TTAT AAGTGTTG TTTTTTTATATTCAT TERM 483 396654 - 396635 - f 82 -9.4 -3.37556 | opp_overlap 396635, overlap 396627 396638 TTGAAAATAACTCAA CAACACTT TTAT AAGTGTTG TTTTTTTATATTCAT MSC_0348 396718 - 397362 + | hypothetical protein TERM 484 397373 - 397353 - T 83 -4 -5.93809 | opp_overlap 397355, overlap 397355 TTTGTATAAAAAAAA GACAGACT AGGGG AGTCTGTT TTTTTAATTATTTAA TERM 485 397355 - 397371 + T 90 -6.6 -5.73672 | opp_overlap 397353 397355 TGTATAAAAAAAAGA CAGACT AGGGG AGTCTG TTTTTTTAATTATTT TERM 486 397371 - 397355 - T 77 -6.6 -4.62054 | opp_overlap 397355, overlap 397353 TGTATAAAAAAAAGA CAGACT AGGGG AGTCTG TTTTTTTAATTATTT infB 399243 - 397381 - | translation initiation factor IF-2 MSC_0350 399564 - 399265 - | hypothetical protein MSC_0351 399838 - 399551 - | hypothetical protein TERM 487 399585 - 399610 + gr 70 -6.3 -4.31329 | opp_overlap 399592, overlap 399592 399606 AATTCTTCTATTTGA TCATAAATAGA TACA TCTATTTTTGA TTTTAAACTTTTTGC TERM 488 399606 - 399632 + gr 73 -4.6 -5.10968 | overlap 399585 ATAGATACATCTATT TTTGATTTTAAA CTT TTTGCAATCAAA TTTTTGTGTCTTGCT nusA 401567 - 399813 - | transcription elongation factor NusA MSC_0353 402070 - 401576 - | hypothetical protein TERM 489 402123 - 402094 - R 80 -5.9 -5.26316 | gap 1, opp_overlap 402098, overlap 402098 TTAGTTTAGAAAAAA TA-AAGCAAGGTAT TAA AAACCTTGCTTCTA GCTTTATATATTATT TERM 490 402118 - 402098 - R 95 -8.3 -5.13354 | opp_overlap 402098, overlap 402094 TTTAGAAAAAATAAA GCAAGGTAT TAA AAACCTTGC TTCTAGCTTTATATA TERM 491 402098 - 402118 + r 75 -8.3 -3.51118 | opp_overlap 402094 402098 TTTAGAAAAAATAAA GCAAGGTAT TAA AAACCTTGC TTCTAGCTTTATATA MSC_0354 402834 - 402184 - | nitroreductase family protein polC 407295 - 402847 - | DNA polymerase III alpha chain TERM 492 403586 - 403599 + g 73 -3.1 -5.5762 | CTACATCCAATAACT GTAGA AATA TCTGC TTTTTTATCTTTAAT TERM 493 404633 - 404643 + g 75 -5.4 -5.02201 | CCATGTTTTGTAATT GAAC CTA GTTC TTTTTCTAATCTTTT TERM 494 404706 - 404718 + g 70 -4.9 -4.81523 | overlap 404701 TTTGTTTTGCTGTTT GATAA CAC TTATC TTTTAATTTTTCATT TERM 495 405372 - 405402 + g 75 -5.7 -4.98911 | gap 1, opp_overlap 405389, overlap 405389 CTTTTAATCCTGCTT GGTTTTTA-ACTAA AATG TTAGTATGAAAACC TTTGTTTTTATAATA cdsA 408329 - 407304 - | phosphatidate cytidylyltransferase TERM 496 407842 - 407828 - G 71 -7.2 -3.95677 | AACCTAAAAAATTAA TTGCTT TAA AAGCAA GAACCATAATTAATA TERM 497 408490 - 408521 + r 72 -6 -4.44151 | opp_overlap 408498, overlap 408498 TTTATTAAAAAACAT TAAAAAAATGACCA ATTT TGGTCATTTGTTAA TTATTTATTATTTTT TERM 498 408498 - 408513 + r 81 -7.6 -4.42287 | opp_overlap 408498, overlap 408490 AAAACATTAAAAAAA TGACCA ATTT TGGTCA TTTGTTAATTATTTA TERM 499 408513 - 408498 - R 100 -7.6 -5.69023 | opp_overlap 408498 408490 AAAACATTAAAAAAA TGACCA ATTT TGGTCA TTTGTTAATTATTTA pepQ 409617 - 408529 - | Xaa-Pro dipeptidase TERM 500 409070 - 409058 - G 70 -6.3 -4.2717 | ATTATTGTATCAAAA CTGAT TTT ATCAG CACCAAATTCTAAAA TERM 501 409691 - 409707 + H 70 -3.1 -5.27923 | opp_overlap 409691, overlap 409679 AAATAAAGATAAGTA TTTTTAT TTA GTAAAAA TTTTTTATAGAATTA trpS 409750 - 410760 + | tryptophan-tRNA ligase TERM 502 410785 - 410765 - T 90 -6.2 -5.8901 | opp_overlap 410765 410767 ATAGAAAATAAAAAA GAGCTTAA AAAAA TTAAGCCC TTTTTAGCGAAGAAA MSC_0359 411685 - 410789 - | hypothetical protein TERM 503 411876 - 411862 - g 70 -2.9 -5.46698 | TTGAAAATCAAAAAA CTTTA ACTGA TAAAG AAAAAGAATTTTTAG MSC_0360 411771 - 412403 + | hypothetical protein TERM 504 412614 - 412587 - T 85 -10.8 -3.10646 | opp_overlap 412587 412593, overlap 412574 412593 AATAAAGAATTAAAT CAAAAATAGACC TATT GGTCTATTTTTA TTAAATATTTAATTA TERM 505 412587 - 412614 + T 72 -8.6 -3.2655 | opp_overlap 412587 412574 412593, overlap 412593 AATAAAGAATTAAAT CAAAAATAGACC TATT GGTCTATTTTTA TTAAATATTTAATTA TERM 506 412608 - 412593 - T 90 -7.6 -5.04222 | opp_overlap 412587 412593, overlap 412587 412574 GAATTAAATCAAAAA TAGACC TATT GGTCTA TTTTTATTAAATATT TERM 507 412593 - 412608 + T 93 -7.6 -5.12971 | opp_overlap 412593 412587 412574, overlap 412587 GAATTAAATCAAAAA TAGACC TATT GGTCTA TTTTTATTAAATATT MSC_0361 413703 - 412633 - | hypothetical protein TERM 508 412930 - 412950 + g 76 -8.4 -3.66874 | TTTATTTTTAATAGC TTCACTGA AAATA TCAGTGAA TTTAGATCAAATTAG MSC_0362 414192 - 414701 + | hypothetical protein TERM 509 414713 - 414723 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 416415 - 414742 - | IS1634AE transposase TERM 510 415971 - 415999 + g 91 -8.3 -5.04356 | opp_overlap 415979, overlap 415976 415997 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 511 415976 - 415994 + g 79 -9 -3.48824 | opp_overlap 415979, overlap 415971 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 512 416510 - 416476 - R 70 -3.8 -5.24129 | gap 2, overlap 416457 416456 416478 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 513 416509 - 416478 - R 84 -8.9 -4.25873 | gap 1, overlap 416457 416456 416476 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG lpp 418226 - 417756 - | putative variable prolipoprotein TERM 514 418423 - 418467 + r 93 -7.3 -5.64321 | opp_overlap 418424 418427 418429, overlap 418424 418429 AAATTTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 515 418424 - 418466 + r 95 -10.8 -3.94933 | opp_overlap 418424 418427 418429, overlap 418423 418429 AATTTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 516 418429 - 418461 + r 100 -10.7 -4.88326 | opp_overlap 418429 418427 418424, overlap 418424 418423 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT MSC_0367 420554 - 420249 - | prolipoprotein TERM 517 420611 - 420642 + r 70 -6.1 -4.30023 | opp_overlap 420617, overlap 420617 TTCTAATAAAAAAAT AAAAAACTTGAAT TACAAT ATTCAAGTTTTTG TTATTTATTCTAATT TERM 518 420636 - 420617 - R 91 -5.1 -6.12458 | opp_overlap 420611 420617 TAAAAAAATAAAAAA CTTGAAT TACAAT ATTCAAG TTTTTGTTATTTATT TERM 519 420617 - 420636 + r 77 -5.1 -5.44198 | opp_overlap 420617, overlap 420611 TAAAAAAATAAAAAA CTTGAAT TACAAT ATTCAAG TTTTTGTTATTTATT lip1 421437 - 420652 - | triacylglycerol lipase MSC_0369 421592 - 421446 - | hypothetical protein MSC_0370 423212 - 421668 - | hypothetical protein TERM 520 423276 - 423255 - R 93 -7.4 -5.64873 | opp_overlap 423254 423258 TTTAATAATAAAAAA CAAGTACT AGAAAA AGTACTTG AATTATTTTGCTCTT MSC_0371 423524 - 423279 - | hypothetical protein tkt 425540 - 423540 - | transketolase MSC_0373 425721 - 425569 - | hypothetical protein MSC_0374 426577 - 425843 - | hypothetical protein gidA 427956 - 426682 - | tRNA (uracil-5-)-methyltransferase Gid TERM 521 427572 - 427599 + g 93 -10.2 -3.95627 | opp_overlap 427577, overlap 427575 TGGCTATAATTGTTG GAATATTTAAAT CAAT ATTTAAATATTC TTGTTCTATAATTTT TERM 522 428232 - 428242 + r 76 -2.6 -5.81622 | overlap 428225 AAGAACTTTTAAAGC TTAA TTT TTAA TTTTTTTAATTTTAT MSC_0376 428540 - 428232 - | hypothetical protein TERM 523 428707 - 428737 + H 82 -4.3 -5.74288 | opp_overlap 428707, overlap 428731 TCGTTTTTTAATTTA TTATTTATCAA CTGTAATCC TTGATAAATAA TTTTTTATTATTTAT TERM 524 428849 - 428839 - g 70 -2.6 -5.59357 | ATTATATGAAAAAAA TATT AAC AATA TTAGGATCTGTTTGT MSC_0377 428727 - 429248 + | prolipoprotein TERM 525 429316 - 429331 + F 100 -7.6 -5.99154 | opp_overlap 429314 TAATTAAAATTTAGA CTTGCA ATAC TGCAAG TTTTTTTATTTAGTA MSC_0378 429858 - 430628 + | hypothetical protein MSC_0379 430543 - 430965 + | hypothetical protein TERM 526 431037 - 431047 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 527 431643 - 431677 + T 70 -3.8 -5.24129 | gap 2, overlap 431644 431673 431674 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 528 431644 - 431675 + T 84 -8.9 -4.25873 | gap 1, overlap 431643 431673 431674 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 529 432181 - 432153 - T 91 -8.3 -5.04356 | opp_overlap 432161, overlap 432143 432158 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 530 432176 - 432158 - T 79 -9 -3.48824 | opp_overlap 432161, overlap 432153 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 531 433439 - 433429 - T 72 -4 -5.29782 | TACATTTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 532 434240 - 434268 + T 91 -8.3 -5.04356 | opp_overlap 434248, overlap 434245 434266 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 533 434245 - 434263 + T 79 -9 -3.48824 | opp_overlap 434248, overlap 434240 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 534 434780 - 434746 - T 75 -3.8 -5.60993 | gap 2, overlap 434726 434725 434748 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 535 434779 - 434748 - T 86 -8.9 -4.45201 | gap 1, overlap 434726 434725 434746 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG MSC_0382 435034 - 434876 - | hypothetical protein TERM 536 436387 - 436403 + G 72 -5.9 -4.49337 | ATAAAAGCTTGATTT GTTGTAA GTT TTGCAAC TTTTATAAGTTATGA MSC_0383 435865 - 437367 + | hypothetical protein MSC_0384 437385 - 438146 + | hypothetical protein TERM 537 438552 - 438542 - g 70 -4 -5.17488 | opp_overlap 438542 AAGATCAAAACAAAA CTTT AAA AAAG ATTTAGTTTTTGAAA TERM 538 438569 - 438601 + G 70 -7.2 -3.65902 | opp_overlap 438569 TTTAGTTTTTGAAAA TCCAGATCCTTTAA TTGAT TTAAATGATTTGGA TTTAGATAAACTAAC MSC_0385 438156 - 438992 + | hypothetical protein MSC_0386 438976 - 439605 + | hypothetical protein rluB 439673 - 440014 + | ribosomal large subunit pseudouridine synthase B MSC_0388 440441 - 441058 + | deoxyguanosine kinase TERM 539 441777 - 441792 + F 87 -6.2 -5.63517 | TTATCACAATGCTGA GTTGTA GAAA TACAAC TTTTTTATTTACAAA TERM 540 441928 - 441952 + G 75 -6.7 -4.50627 | opp_overlap 441928 441935 441946 TTAATAGTTAATTTA TTAATGATATT TTT AATATTATTAA TTTATTTAATAACTA MSC_0389 441883 - 442710 + | hypothetical protein TERM 541 442718 - 442763 + F 100 -10.9 -5.38951 | overlap 442715 TAGTTTAAGTTTTAA TCTTATTATTTATATTTAGTC AGTT GATTAAGTGTAGATAATAAGA TTTTTTATATAGATT TERM 542 442827 - 442813 - f 70 -4.4 -5.04249 | opp_overlap 442825, overlap 442825 TTCTTAAAAAATAAA TTATTT TAA AAATAA GTATAGAACTTATTC vmm 442973 - 443152 + | variable surface protein vmm TERM 543 444076 - 444044 - g 82 -5.8 -5.57729 | gap 1, opp_overlap 444046, overlap 444046 AAACAATATAAAAAA GT-TCAAATACCAGA TAAA CCTGATATTTGATAC TTAACAAGAGTTGCT MSC_0391 444017 - 444133 + | hypothetical protein TERM 544 444470 - 444456 - f 78 -4.3 -5.54907 | opp_overlap 444456 CTGAGAAAATAAAAA TTGCT AGTAA AGCAA TTCTTCTCAACTTCA lpp 445015 - 445359 + | prolipoprotein TERM 545 445605 - 445595 - f 70 -2.6 -5.56568 | ATATTATTAAAAAAA TTAA AAA TTAA AATATCTAAATGCAG TERM 546 445620 - 445630 + F 90 -6.8 -5.80817 | opp_overlap 445620 AAATATCTAAATGCA GACC AAG GGTC TTTTTTTATATTAAA MSC_0393 445761 - 446162 + | hypothetical protein TERM 547 446327 - 446347 + F 73 -7 -4.05583 | opp_overlap 446327 446326, overlap 446326 ATATATCAATAAAAG GAAAGATT AATTA AATCTTTC TCTTTTTACTATTAA TERM 548 446666 - 446686 + F 100 -11.3 -5.28826 | opp_overlap 446665 446670 AATATTTTGTAAAGT GAAAGGTTT AAG AAACCTTTC TTTTTTATCCAATTT pts 446798 - 447247 + | PTS system, IIA component TERM 549 448728 - 448689 - g 82 -11.2 -2.57092 | opp_overlap 448689 448692 448692, overlap 448685 AATCTTACCAATTTA TAGTTTTTTAACTAAA AAAATTAA TTTAGTTAAAAAACTA GATAATAACAATAAA ulaA 447259 - 449067 + | ascorbate-specific PTS system enzyme IIC/IIB TERM 550 449637 - 449619 - g 70 -3.2 -5.36314 | opp_overlap 449623, overlap 449620 449623 GAAAATATTAAAAAA TTAATTGA TTG TCAATTAG ATTGAATAGTTGTTG rpe 449067 - 449723 + | ribulose-phosphate 3-epimerase TERM 551 449740 - 449720 - f 75 -8.5 -3.5489 | opp_overlap 449725 449735, overlap 449725 ACAACTTGAAACTAA TTAAACTAT TTT ATAGTTTAA CCTTAAACTTAATTT TERM 552 450121 - 450109 - g 70 -3.4 -5.4148 | overlap 450102 GAAATAATTAAAAAA GCTT TTATT AAGC AAAATTCTATTGACG lpp 449911 - 450624 + | prolipoprotein TERM 553 450641 - 450658 + F 85 -6.3 -5.62552 | opp_overlap 450636 450641 ATATTAAGACTAAAA GGCGTAT AAAA ATATGCC TTTTTTAATTTTTTT TERM 554 450720 - 450734 + F 95 -8.6 -5.24416 | opp_overlap 450720 TTTTCTTATAATAAA GCCTAT TCT ATAGGC TTTTTATTATACTTA TERM 555 450734 - 450720 - f 80 -8.6 -4.30719 | opp_overlap 450720 TTTTCTTATAATAAA GCCTAT TCT ATAGGC TTTTTATTATACTTA TERM 556 450772 - 450789 + F 100 -4.1 -7.14698 | overlap 450764 TAAAGAACTTGTTAA CGAGCTT TTAA AGGCTTG TTTTTTTTTTTTTTT natA 450876 - 452816 + | Na+ ABC transporter, ATP-binding component MSC_0399 452976 - 453563 + | hypothetical protein TERM 557 453789 - 453765 - g 70 -7.3 -3.69301 | overlap 453784 AAAAATAATAATTAA TGAAAAGAACT TAA AGTTATTTTCA AAACCTTTTGGAAAT TERM 558 454313 - 454297 - g 71 -8.1 -3.01712 | opp_overlap 454295 454292 454297, overlap 454299 454304 TCTCGTGTTTTAACA GATCAAT TAG ATTGATC TAGTTATATTAAAAC TERM 559 454297 - 454313 + G 71 -8.1 -2.94293 | opp_overlap 454297 454299 454304, overlap 454295 454292 TCTCGTGTTTTAACA GATCAAT TAG ATTGATC TAGTTATATTAAAAC MSC_0400 453718 - 454629 + | hypothetical protein lpp 454681 - 454815 + | prolipoprotein TERM 560 456566 - 456548 - g 75 -9 -3.27994 | overlap 456524 GTAATGCTAGATCAA TTCCATAA GTT TTATGGAA TTCAAAAGGCATACC MSC_0402 455051 - 457189 + | hypothetical protein TERM 561 457991 - 458007 + T 95 -9.5 -4.78764 | opp_overlap 457991 TAATATAATAGCAAA TACTCCT TTA AGGAGTA TTTTTCCTACGTTTC TERM 562 458007 - 457991 - T 86 -9.5 -4.00882 | opp_overlap 457991 TAATATAATAGCAAA TACTCCT TTA AGGAGTA TTTTTCCTACGTTTC TERM 563 458027 - 458061 + T 75 -3.8 -5.60993 | gap 2, overlap 458028 458057 458058 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 564 458028 - 458059 + T 86 -8.9 -4.45201 | gap 1, overlap 458027 458057 458058 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 565 458567 - 458539 - T 91 -8.3 -5.04356 | opp_overlap 458547, overlap 458529 458544 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 566 458562 - 458544 - T 79 -9 -3.48824 | opp_overlap 458547, overlap 458539 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 567 459829 - 459819 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 568 459911 - 459895 - T 84 -9.5 -3.80862 | opp_overlap 459887 459895, overlap 459887 AAACGTAGGAGCAAA TACTCCT TTA AGGAGTA TTTTTTTATAATTTT TERM 569 459895 - 459911 + T 100 -9.5 -5.77632 | opp_overlap 459887 459895, overlap 459887 AAACGTAGGAGCAAA TACTCCT TTA AGGAGTA TTTTTTTATAATTTT TERM 570 459961 - 459938 - T 79 -4 -5.7946 | opp_overlap 459938 TTTTTAATAAAAAAA GATTACTT AGTTAAAA AAGTAATC TATATTAAAATGTTA ppa 460542 - 459982 - | inorganic pyrophosphatase TERM 571 460572 - 460591 + H 74 -5.2 -5.1101 | opp_overlap 460590 TTTTTGATTATTTAT TATTTATT TTAT AATAAATA TTTTTTAAATAATAG MSC_0405 460691 - 461578 + | hypothetical protein MSC_0406 461647 - 462342 + | hypothetical protein cmk 462351 - 463019 + | cytidylate kinase engA 463019 - 464326 + | GTP-binding protein EngA gpsA 464328 - 465326 + | glycerol-3-phosphate dehydrogenase NAD(P)+ MSC_0410 465358 - 465630 + | DNA-binding protein HU (HB) TERM 572 465666 - 465634 - f 100 -13.7 -3.74526 | opp_overlap 465643, overlap 465637 465643 TCATTAATGTAATAA TTATAAAAAGGTTGC TAA GCAACCTTTTTATTA ACATTTATAAAGGAA TERM 573 465663 - 465637 - f 100 -15.4 -2.96329 | opp_overlap 465643, overlap 465634 465643 TTAATGTAATAATTA TAAAAAGGTTGC TAA GCAACCTTTTTA TTAACATTTATAAAG TERM 574 465643 - 465657 + F 100 -10 -5.11112 | opp_overlap 465637 465634 465643 TAATAATTATAAAAA GGTTGC TAA GCAACC TTTTTATTAACATTT TERM 575 465657 - 465643 - f 100 -10 -5.03945 | opp_overlap 465643, overlap 465637 465634 TAATAATTATAAAAA GGTTGC TAA GCAACC TTTTTATTAACATTT MSC_0411 465688 - 466224 + | hypothetical protein TERM 576 466495 - 466505 + TF 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 577 467743 - 467771 + TF 91 -8.3 -5.04356 | opp_overlap 467751, overlap 467748 467769 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 578 467748 - 467766 + TF 79 -9 -3.48824 | opp_overlap 467751, overlap 467743 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 579 468283 - 468249 - Tf 75 -3.8 -5.60993 | gap 2, overlap 468229 468228 468251 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 580 468282 - 468251 - Tf 86 -8.9 -4.45201 | gap 1, overlap 468229 468228 468249 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 581 468837 - 468871 + TF 75 -3.8 -5.60993 | gap 2, overlap 468838 468867 468868 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 582 468838 - 468869 + TF 86 -8.9 -4.45201 | gap 1, overlap 468837 468867 468868 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 583 469377 - 469349 - Tf 91 -8.3 -5.04356 | opp_overlap 469357, overlap 469339 469354 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 584 469372 - 469354 - Tf 79 -9 -3.48824 | opp_overlap 469357, overlap 469349 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 585 470626 - 470616 - Tf 79 -4 -5.69473 | TACATTATAAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 586 471522 - 471478 - Tf 93 -7.3 -5.64321 | opp_overlap 471479 471482 471484, overlap 471479 471484 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 587 471521 - 471479 - Tf 95 -10.8 -3.94933 | opp_overlap 471479 471482 471484, overlap 471478 471484 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 588 471516 - 471484 - Tf 100 -10.7 -4.88326 | opp_overlap 471482 471479 471484, overlap 471479 471478 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA recU 471991 - 471548 - | recombination protein U MSC_0417 471952 - 472431 + | hypothetical protein MSC_0418 472626 - 474056 + | hypothetical protein TERM 589 474083 - 474104 + F 100 -8.9 -5.58522 | opp_overlap 474083 ATAATTTTTATTAAA GTTCAAATA AATT TATTTGAAC TTTTTATTTTCTATA TERM 590 474104 - 474083 - f 79 -8.9 -3.75015 | opp_overlap 474083 ATAATTTTTATTAAA GTTCAAATA AATT TATTTGAAC TTTTTATTTTCTATA lpp 474159 - 475382 + | prolipoprotein TERM 591 476181 - 476166 - g 70 -6.2 -4.23723 | opp_overlap 476165 TAATAGTATGGAAAA TAAACC TGTA GGTTTA GCTTATATTGGTGTT cinA 475771 - 476319 + | competence-damage inducible protein recA 476358 - 477395 + | recombinase A TERM 592 477402 - 477413 + F 86 -5.8 -5.73978 | opp_overlap 477402 AAAGAATAATTTAAA GCAC CAAT GTGC TTTTTTGTTTGTAAT TERM 593 477918 - 477902 - g 82 -5.3 -5.49579 | CTAGAAAAAAGAAAA TTTTTAT TAG ATAAAAA AGAAGAATATTTAAT MSC_0422 477545 - 479074 + | hypothetical protein ffh 479104 - 480447 + | Signal recognition particle M54 protein MSC_0424 480453 - 480920 + | hypothetical protein TERM 594 480927 - 480952 + F 100 -11.3 -5.48303 | CACAAATAATTTTTA GGTGTTAAGTA CAAT TACTTGACACC TTTTTTTAAAATTGT rpsP 481010 - 481336 + | 30S ribosomal protein S16 rimM 481354 - 481842 + | 16S rRNA processing protein RIMM trmD 481844 - 482566 + | tRNA (guanine-N1)-methyltransferase rplS 482568 - 482960 + | 50S ribosomal protein L19 TERM 595 482967 - 483001 + F 90 -6.8 -5.80003 | gap 1, opp_overlap 482966 482974 ATCAAATAATTTAAT CATCAT-ATAAAGTA TTTTTC TACTTTATTATGATG TTTTTTATTTATTGA MSC_0429 483052 - 484002 + | GTP-binding protein rnhB 483996 - 484619 + | ribonuclease H II TERM 596 484640 - 484600 - T 79 -4.1 -5.66868 | opp_overlap 484603, overlap 484603 AACCAATTAAAAAAA TAAGCAAAGAAACTAGT TAAAAAG ACTAGAATCTTTGCTTT TTTATTCAAAATTAT TERM 597 484603 - 484637 + T 88 -6.5 -5.45652 | opp_overlap 484603 484600 CAATTAAAAAAATAA GCAAAGAAACTAGTT AAAAA GACTAGAATCTTTGC TTTTTTATTCAAAAT TERM 598 484637 - 484603 - T 73 -5.8 -4.88485 | opp_overlap 484603, overlap 484600 CAATTAAAAAAATAA GCAAAGAAACTAGT TAAAAAG ACTAGAATCTTTGC TTTTTTATTCAAAAT lpp 486200 - 485130 - | prolipoprotein aspS 486830 - 486528 - | aspartate-tRNA ligase MSC_0433 487467 - 487772 + | hypothetical protein TERM 599 487910 - 487928 + F 86 -5.3 -5.63236 | opp_overlap 487910 AATTAAATAATATTA GAGACTA TAACT TGGTCTC TTTTTCTTTTTAAAT TERM 600 488835 - 488845 + G 72 -4 -5.28683 | opp_overlap 488835 TTCAATCTGTAATGA TAAG TAT CTTA TTTTTTGCTATTAAT abc 487991 - 489862 + | ABC transporter, permease and ATP-binding componen abc 489871 - 491733 + | ABC transporter, permease and ATP-binding componen TERM 601 492371 - 492390 + G 80 -9.4 -3.28714 | opp_overlap 492370 492375, overlap 492375 492388 ATATTTTAAATGCAT TAAAGGTC GGAA GACCTTTA TCTTCTAATGAATAT MSC_0436 491773 - 493380 + | hypothetical protein TERM 602 493397 - 493427 + F 78 -8.6 -3.95324 | overlap 493394 TTATATTATTTATTT TCATATATAAATAT GAT AAATTTATATATGA TTATTATTGCCCATG TERM 603 493529 - 493543 + F 100 -10 -5.79595 | opp_overlap 493529 TTAGAATCATTAAAA TCGTGC TAA GCACGA TTTTTTGTTTTAGAA TERM 604 493543 - 493529 - f 100 -10 -4.37527 | opp_overlap 493529 TTAGAATCATTAAAA TCGTGC TAA GCACGA TTTTTTGTTTTAGAA TERM 605 494169 - 494183 + GF 73 -5.8 -4.77047 | opp_overlap 494168, overlap 494167 TAAAAACAAATGATG TTATTG TAG CAATAA TTTATTTATCTTTTC MSC_0437 493568 - 494320 + | hypothetical protein MSC_0438 494295 - 494621 + | hypothetical protein TERM 606 495007 - 494993 - gf 86 -5.8 -5.69473 | opp_overlap 494992 TATATGATAAAAAAA CTAATA ACA TATTAG CTGATATCAATGAAA TERM 607 495084 - 495072 - gf 70 -6.3 -4.19735 | GGGTGGAAAAGGAAA TGCAA GAT TTGCA AATTCAAGAAATAAA TERM 608 495184 - 495212 + GF 71 -6.8 -4.15222 | GCAGATGTTGGATTT GTTGGTTTACCA AATGC TGGAAAATCAAC TTTATTAAGAGCAAT obgE 494692 - 495993 + | GTPase ObgE nadE 495965 - 496732 + | NH(3)-dependent NAD(+) synthetase MSC_0441 496750 - 496995 + | hypothetical protein nadD 497013 - 498116 + | putative nicotinate-nucleotide adenylyltransferase pfs 498118 - 498774 + | 5-methylthioadenosine nucleosidase/S-adenosylhomocystein nucleosidase MSC_0444 498796 - 499440 + | deoxynucleoside kinase TERM 609 499431 - 499479 + T 100 -9.3 -5.9663 | opp_overlap 499431 499443 499448 AGAAATTGATAATAA GATAGACTAAAATAAAATAAAAA ACT TTTTTAGTTTATTTTAGTACATC TTTTTTTTAGTCTTT TERM 610 499479 - 499431 - T 100 -11.5 -3.87597 | opp_overlap 499431, overlap 499443 499448 AGAAATTGATAATAA GATAGACTAAAATAAAATAAAAA ACT TTTTTAGTTTATTTTAGTACATC TTTTTTTTAGTCTTT TERM 611 499462 - 499448 - T 73 -4.4 -5.16132 | opp_overlap 499431, overlap 499443 499431 TAGACTAAAATAAAA TAAAAA ACT TTTTTA GTTTATTTTAGTACA MSC_0445 500313 - 499906 - | hypothetical protein TERM 612 500048 - 500033 - G 79 -4.8 -5.45813 | opp_overlap 500033 500036 GATGAAAAAATAAAA GATTTT TCTA AAAATC TAGTCTTTGAAAACT MSC_0446 500642 - 501409 + | hypothetical protein TERM 613 501409 - 501428 + F 73 -2.1 -5.68039 | overlap 501410 AAACATGTCTGTTTA ACTCCTA AATATA TAGGAGC TTTTTTTGTAAATTT trmU 501506 - 502633 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MSC_0448 502675 - 503292 + | hypothetical protein TERM 614 503298 - 503312 + F 76 -2.8 -5.95286 | opp_overlap 503295 503298 AAGTAATTAAACTTA GGCA CTAATGA TGCC TTTTTTATTTTTAAT MSC_0449 503370 - 505514 + | hypothetical protein fmt 505504 - 506457 + | methionyl-tRNA formyltransferase efp 506544 - 507098 + | elongation factor P MSC_0452 507116 - 507418 + | hypothetical protein MSC_0453 507435 - 508721 + | FKBP-type peptidyl-prolyl isomerase TERM 615 508774 - 508729 - f 75 -7.3 -4.30104 | gap 1, opp_overlap 508744, overlap 508733 508744 508771 GAAATTAATAAACAA TAAATTAAATTTAAACTATCCT CAA AGGATAGTTTTTATT-AATTTA GCACTTTAGTATGTT TERM 616 508744 - 508760 + F 100 -9.5 -5.24551 | opp_overlap 508733 508729 508744 TAAATTAAATTTAAA CTATCCT CAA AGGATAG TTTTTATTAATTTAG TERM 617 508760 - 508744 - f 86 -9.5 -3.90943 | opp_overlap 508744, overlap 508733 508729 TAAATTAAATTTAAA CTATCCT CAA AGGATAG TTTTTATTAATTTAG TERM 618 510373 - 510363 - g 78 -5.4 -5.24449 | CAGAAATTGAAAAAA TGCA TAT TGCA AAAGATTATTTAACT lon 508805 - 511195 + | endopeptidase La TERM 619 511238 - 511220 - f 91 -10.4 -3.65699 | opp_overlap 511220, overlap 511216 511213 TCTATAAATAATTAA CTCACAAT TAA ATTGTGAG TTTTTATTTTTTAAA TERM 620 511220 - 511238 + F 100 -10.4 -5.75538 | opp_overlap 511216 511213 511220 TCTATAAATAATTAA CTCACAAT TAA ATTGTGAG TTTTTATTTTTTAAA MSC_0455 511312 - 512547 + | recombination factor protein RarA lpp 515264 - 512802 - | prolipoprotein TERM 621 513982 - 513997 + g 74 -6.2 -4.68607 | opp_overlap 513981 TTAGAAACAAAACTT GCATAA GGTT TTATGC TTTCTATTTTTTCTA TERM 622 519477 - 519464 - g 87 -3.9 -6.32976 | opp_overlap 519464 AAAAAAACAAAAAAA GAATT AGAA AATTC TTCTGAACACTGATA MSC_0457 515414 - 520678 + | hypothetical protein TERM 623 520678 - 520696 + F 100 -7.5 -5.42131 | opp_overlap 520676 520678, overlap 520687 AGTTTCAAACGAATA GAGTCTT GACAA AAGACTC TTTTTTGTATAATTA TERM 624 520696 - 520678 - f 70 -7.5 -3.33419 | opp_overlap 520678 520687, overlap 520676 AGTTTCAAACGAATA GAGTCTT GACAA AAGACTC TTTTTTGTATAATTA MSC_0458 520726 - 521277 + | ThiJ/PfpI family protein TERM 625 521288 - 521315 + G 100 -10 -5.08601 | opp_overlap 521288 GTTAATTTTAAAAAA TCACCTCTAATA CATA TATGAGAGGTGA TTTTTATTAAACTGA TERM 626 521315 - 521288 - g 100 -10 -5.09426 | opp_overlap 521288 GTTAATTTTAAAAAA TCACCTCTAATA CATA TATGAGAGGTGA TTTTTATTAAACTGA TERM 627 522163 - 522184 + G 70 -4.6 -4.95618 | opp_overlap 522163, overlap 522152 AATTTTTTATATTAA TAAAACTA TTTTTT TAGTTTTA TTTGTTTTTGATCTT TERM 628 522332 - 522318 - g 79 -3.6 -5.66684 | opp_overlap 522319, overlap 522319 TAATTGATAAAAAAA CTAGTT TAG AACTAA TTAATAAAGATTTAA abc 521270 - 522544 + | ABC transporter, ATP-binding and permease protein MSC_0460 522933 - 523160 + | hypothetical protein TERM 629 523178 - 523167 - g 76 -3 -5.89827 | AAGGATTAAAAAAAA TGAT AAGA ATCA ACTATTTTAATGAAA MSC_0461 523166 - 523660 + | hypothetical protein era 523664 - 524569 + | GTP-binding protein Era TERM 630 524775 - 524763 - g 70 -3.5 -5.37593 | overlap 524767 TTTTAAATCAAAAAA TAAAT TTA ATTTA TCTAAATTAAAAAGA TERM 631 524786 - 524767 - g 74 -5.2 -5.14819 | overlap 524763 AAATCAAAAAATAAA TTTAATTT ATCT AAATTAAA AAGATCAGAATTGAT recO 524569 - 525318 + | DNA repair protein recO TERM 632 525713 - 525685 - g 81 -9.1 -3.92602 | opp_overlap 525689 TGAAGAGCTGATAAA TTAATTGAAGAAT TTG ATTCATCAATTAA TACTGGAATTATGAC glyS 525382 - 526752 + | glycyl-tRNA synthetase TERM 633 528099 - 528071 - gf 73 -2.6 -5.69379 | overlap 528074 528091 ATAGAATTAAAAAAA CAATTAAAACTA AATAA TAGTTTTAATAA AAATTCAACAACACA TERM 634 528096 - 528074 - gf 78 -6.5 -4.88485 | overlap 528071 528091 GAATTAAAAAAACAA TTAAAACTA AATAA TAGTTTTAA TAAAAATTCAACAAC TERM 635 528555 - 528539 - gf 70 -3 -5.58209 | overlap 528540 TCAAATTTAAAAAAA CTGCTT GCTGA AAGCAA AAATAAAACAGAGAG dnaG 526787 - 528625 + | DNA primase TERM 636 528670 - 528680 + GF 70 -4 -5.1925 | TTAAAAAAGATTGCT TCAT TTA ATGA TTTTTTAGATTATAC rpoD 528580 - 530148 + | RNA polymerase sigma-A factor TERM 637 530331 - 530349 + G 78 -6.8 -4.75063 | opp_overlap 530331, overlap 530325 AAAAACGTTGAAAAA TTTGGTTT AAC AGACCAAA TTTTTGCCATTTTAT MSC_0467 530148 - 530825 + | hypothetical protein TERM 638 531182 - 531172 - g 73 -2.6 -5.64421 | opp_overlap 531172, overlap 531165 ATTTTAAATAAAAAA TTAA AAA TTAA TTCTTTTAAAAAATA MSC_0468 530812 - 531588 + | hypothetical protein TERM 639 531828 - 531800 - g 81 -7 -4.88258 | gap 1, opp_overlap 531803 AAAATTAGAAGAAAA TAATAATTAC-GC TCAA GCAGTAATTATTA GTCCAACTAGAGAAC TERM 640 531981 - 531963 - g 89 -4.6 -6.02345 | CAATTAGAAAAAAAA CAACCACA TAT TGTAATTG GAACACCAACTAGAT TERM 641 532667 - 532657 - g 72 -4 -5.43553 | ATTTAAAAAATAAAA TTCA AAT TGAA GAACTAATTAAAAAA deaD 531597 - 532958 + | ATP-dependent RNA helicase MSC_0470 532998 - 533738 + | hypothetical protein MSC_0471 533750 - 534511 + | hypothetical protein MSC_0472 534626 - 536308 + | hypothetical protein TERM 642 537039 - 537020 - gf 79 -3.6 -5.80003 | overlap 537013 TGAAGAAATAAAAAA CAAGTGTT TATT AAAACTTG AAAATAAAAAGCAAA MSC_0473 536160 - 538781 + | hypothetical protein TERM 643 538777 - 538759 - f 83 -7.6 -4.58786 | ATCAAGAAGAACAAA TCATTAAT GGA ATTAATGA CTAGAAAGGCAGAAT apt 538793 - 539305 + | adenine phosphoribosyltransferase TERM 644 539332 - 539350 + F 87 -6.1 -5.73339 | opp_overlap 539326 539332 ATAAAACATTAAAAA TAAAGAC TTTTT GTCTTTA TTTTTTTATAATTAT TERM 645 539350 - 539332 - f 78 -6.1 -4.99972 | opp_overlap 539332, overlap 539326 ATAAAACATTAAAAA TAAAGAC TTTTT GTCTTTA TTTTTTTATAATTAT TERM 646 541038 - 541048 + G 75 -4 -5.49234 | opp_overlap 541038 ACAATGGACTATAAT TCAT TAA ATGA TTTTTTATTAGATGT relA 539388 - 541640 + | GTP diphosphokinase TERM 647 541683 - 541650 - T 82 -8.3 -4.46531 | opp_overlap 541650 541655 541660 541675, overlap 541660 AACTAAAAAATTAAA TAATAAAAAATCCGG TGCC CCGGATTTTATTTTA TAAATTAGTGTAAGT TERM 648 541655 - 541678 + T 82 -8.2 -4.48221 | opp_overlap 541650 541660, overlap 541650 541660 541675 AAAAATTAAATAATA AAAAATCCGG TGCC CCGGATTTTA TTTTATAAATTAGTG TERM 649 541673 - 541660 - T 100 -8.1 -5.72254 | opp_overlap 541660 541655 541650, overlap 541650 TTAAATAATAAAAAA TCCGG TGCC CCGGA TTTTATTTTATAAAT TERM 650 541660 - 541673 + T 95 -8.1 -5.19275 | opp_overlap 541650 541660, overlap 541655 541650 TTAAATAATAAAAAA TCCGG TGCC CCGGA TTTTATTTTATAAAT MSC_0476 544654 - 541688 - | P115-like protein TERM 651 542841 - 542853 + g 72 -4.9 -5.09221 | TATTCAGTTATTTCT TTAGT TTT ACTAA TTTCTTTTTGTTCTA TERM 652 544428 - 544405 - G 78 -6.8 -4.8083 | opp_overlap 544417 544419 GAATATTATTAAAAA CTAATGTTAC TTCA GCAACATCAG CTGCCTTTTTTTCAT TERM 653 544846 - 544877 + r 73 -3.1 -5.50925 | opp_overlap 544846 GATATTAAATAAAAA TAGTGTTAATAGA ATTAAA TCTAATATCACTA TTTTTTCTATTGATT TERM 654 544877 - 544846 - R 70 -3.1 -5.35815 | opp_overlap 544846 GATATTAAATAAAAA TAGTGTTAATAGA ATTAAA TCTAATATCACTA TTTTTTCTATTGATT TERM 655 544991 - 544971 - R 80 -9.9 -2.76696 | opp_overlap 544969, overlap 544970 544974 TTTGCTCTTAACAAT TAATCATGA AAT TCATGATTA GGATCTATTTTTGTA MSC_0477 545355 - 545101 - | hypothetical protein MSC_0478 545819 - 545598 - | hypothetical protein TERM 656 545964 - 545953 - R 89 -4.4 -6.04419 | opp_overlap 545953 545948 AAAACAATAAAAAAA GAAC TTAT GTTC TTTTAATTGCTTGTT rnc 546665 - 545967 - | ribonuclease III plsX 547659 - 546655 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 657 547679 - 547691 + r 75 -7.7 -3.99229 | opp_overlap 547679 ACTCCTTTTAAAAAA TCCCT ATA AGGGA TTATTCTATTGCTAT TERM 658 547691 - 547679 - R 90 -7.7 -5.00884 | opp_overlap 547679 ACTCCTTTTAAAAAA TCCCT ATA AGGGA TTATTCTATTGCTAT MSC_0481 549335 - 547692 - | kinase related to hydroxyacetone kinase MSC_0482 549681 - 549361 - | hypothetical protein rpmB 549840 - 550037 + | 50S ribosomal protein L28 TERM 659 550056 - 550071 + F 95 -6.2 -6.0427 | opp_overlap 550055 550056 550058 GTAAAATAATAATAG TATGAC ATTT GTCATA TTTTTTTTATATAAT TERM 660 550199 - 550214 + F 100 -7.6 -6.14618 | opp_overlap 550199 CAATCGATTAATAAA CTTGGA TTAA TCCAAG TTTTTTTATTTTATA TERM 661 550214 - 550199 - f 78 -7.6 -4.26871 | opp_overlap 550199 CAATCGATTAATAAA CTTGGA TTAA TCCAAG TTTTTTTATTTTATA TERM 662 550220 - 550247 + F 72 -8.8 -2.67209 | TTAATCCAAGTTTTT TTATTTTATATT AATT AATATAAAATAA TAATATGAATTGGTG MSC_0484 550268 - 550711 + | hypothetical protein pstS 550801 - 551952 + | phosphate ABC transporter substrate-binding protein TERM 663 551970 - 551946 - f 77 -6.7 -4.62471 | opp_overlap 551949, overlap 551963 TTTAAGTTTTAAAAA TAATTAAAATA AAT TATTTTAATCA ATTAAATAGTAAAAA pstCA 552012 - 554102 + | phosphate ABC transport system, permease component TERM 664 554271 - 554285 + G 76 -8.6 -3.6796 | ATAGGACCATCAGGT TGTGGT AAA ACCACA TTATTAAAATCTATT pstB 554208 - 554906 + | phosphate ABC transporter ATP-binding protein phoU 554915 - 555589 + | phosphate transport system regulator PhoU TERM 665 555840 - 555828 - g 76 -2.7 -5.86609 | overlap 555829 TTAAAAAAACAAAAA CTAGT GAA ACTAA AAAACAAGAAAAACC TERM 666 556557 - 556542 - g 77 -4.8 -5.37345 | CTGAATTAGAAAAAA TGAATA AAAT TATTCA ACAAGTAGAAAAATC ftsY 555656 - 556858 + | cell division protein FtsY MSC_0490 556839 - 557183 + | gene regulatory 13K protein MSC_0491 557168 - 557944 + | hypothetical protein TERM 667 557928 - 557950 + F 78 -9.4 -3.07043 | opp_overlap 557928 557927 557931, overlap 557931 CAAGTATTAAAAGAT TAACTATTAA AGA TTAATAGTTA TGTTAAAATAATAAA TERM 668 557950 - 557928 - f 76 -9.4 -2.86033 | opp_overlap 557928 557931, overlap 557927 557931 CAAGTATTAAAAGAT TAACTATTAA AGA TTAATAGTTA TGTTAAAATAATAAA TERM 669 558069 - 558109 + F 75 -8.6 -3.48747 | opp_overlap 558072 558080 558090, overlap 558072 558090 ATAAGGGCTTTAAGC TAACAATGAGATTGTCTT AAACC ATGACAATTTTATTGTTA TGGTTTTTTAATTTT TERM 670 558112 - 558090 - f 72 -7.8 -3.55071 | opp_overlap 558072 558069 558090, overlap 558080 TGAGATTGTCTTAAA CCATGACAAT TTT ATTGTTATGG TTTTTTAATTTTCAT TERM 671 558090 - 558112 + F 100 -10 -5.48054 | opp_overlap 558080 558090, overlap 558072 558069 TGAGATTGTCTTAAA CCATGACAAT TTT ATTGTTATGG TTTTTTAATTTTCAT metK 558154 - 559317 + | S-adenosylmethionine synthetase cut 559308 - 559991 + | copper homeostasis protein TERM 672 561093 - 561083 - g 76 -2.6 -5.95946 | TTAATAATAAAAAAA TAAA ACC TTTA CCAAACACAACAATT gid 559984 - 561300 + | tRNA (uracil-5-)-methyltransferase Gid TERM 673 561744 - 561733 - g 73 -3 -5.63236 | opp_overlap 561733, overlap 561741 AGCTAAAAATAAAAA TCAA TTAA TTGA TTTAGTTAATCAAAA pmi 561326 - 562255 + | mannose-6-phosphate isomerase ung 562248 - 562901 + | uracil-DNA glycosylase TERM 674 563926 - 563911 - g 74 -4.8 -5.16572 | ATTGAACTCAAAAAA TTATCA GTAT TGATAA TAAAATGTTTTATAA cbf 562974 - 563954 + | CMP-binding-factor TERM 675 563944 - 563932 - T 70 -4.9 -4.79352 | opp_overlap 563943, overlap 563934 563943 GTATTGATAATAAAA TGTTT TAT AAACA TAAAAAATAGAAGTC TERM 676 563952 - 563969 + T 84 -4.9 -5.75599 | opp_overlap 563943 563952, overlap 563943 TATAAACATAAAAAA TAGAAGT CAAA GCTTCTA TTTTTTTGTAATTTA TERM 677 563969 - 563952 - T 78 -4.2 -5.59879 | opp_overlap 563952 563943, overlap 563943 TATAAACATAAAAAA TAGAAG TCAAAG CTTCTA TTTTTTTGTAATTTA hit 564383 - 563985 - | histidine triad protein TERM 678 564039 - 564056 + g 73 -2.7 -5.65496 | overlap 564040 AATATCAACAATTTC AGCTTTT AATA AAAAGCC TTTTTCTTTTTCATA TERM 679 564142 - 564161 + g 100 -8 -5.50723 | opp_overlap 564142 TCATTTGATAAATAA TTAAATCC AGCT GGATTTAA TTTTTCTTTTAATAA TERM 680 564161 - 564142 - G 77 -8 -4.07877 | opp_overlap 564142 TCATTTGATAAATAA TTAAATCC AGCT GGATTTAA TTTTTCTTTTAATAA lpp 566539 - 564386 - | prolipoprotein TERM 681 565177 - 565149 - G 72 -6.2 -4.4078 | TTTTCTGAAGCAAAA CCATTATTATTA TTTGT TAATAATGATGG GACATTAACTCTAGC TERM 682 565790 - 565802 + g 72 -6.3 -4.47158 | CTTACCATCTTCCTT TACAG ATG CTGTA TTTGTTATATATTCT TERM 683 566488 - 566472 - G 93 -10.9 -3.31144 | overlap 566476 566479 TTTTTAGTTGTACAA GCAACAG CAA CTGTTGC AGTTCCAGCTGATAG MSC_0500 569451 - 566539 - | hypothetical protein TERM 684 569226 - 569240 + g 71 -5.8 -4.731 | overlap 569234 ATAAAATTCCAGCTG CTAATA AAT TATTAG TTTTATTAATAAGTT TERM 685 569975 - 569955 - g 71 -8.5 -3.09286 | overlap 569954 ATATGATTGTAAAAG GTTTAATTA ACT TAATTAAAC AAGATGAGGAAATTC TERM 686 570066 - 570051 - g 76 -2.6 -5.83211 | overlap 570052 GATTAAAACAAAAAA CTAATG CTGT CATTAA AAATCTAGAACTAAC nifS 569654 - 570892 + | nitrogen fixation protein class-V pyridoxal-phosph nifU 570895 - 571332 + | nitrogen fixation protein NIFU MSC_0503 571325 - 571888 + | 5-formyltetrahydrofolate cyclo-ligase MSC_0504 572231 - 573805 + | peptidase TERM 687 574545 - 574533 - g 70 -4.9 -4.88736 | TATTACTGATAAAAA TAAAG GTG CTTTA AAACAATTAGCTGAT pgi 574024 - 575307 + | glucose-6-phosphate isomerase TERM 688 575763 - 575752 - g 73 -3 -5.65496 | TATTAAAAATAAAAA TGAT GATG ATCA GATAACTTTAAAATA MSC_0506 575333 - 575779 + | hypothetical protein MSC_0507 575819 - 576322 + | hypothetical protein TERM 689 576502 - 576486 - g 79 -8.1 -4.09649 | overlap 576484 CAGATTATAAAAACA TTACTAG GTA CTAGTAA AACTTTAGAAGTTTT spoU 576339 - 577106 + | rRNA methylase TERM 690 577119 - 577152 + F 82 -9.1 -4.18191 | opp_overlap 577127, overlap 577127 TAGTTTATTAATAAT TAGATAAAGTTCGAT AATT ATCGAACTTTTTTTA TTATTCTATTTTTTA TERM 691 577127 - 577144 + F 100 -8.5 -5.97979 | opp_overlap 577127, overlap 577119 TAATAATTAGATAAA GTTCGAT AATT ATCGAAC TTTTTTTATTATTCT TERM 692 577144 - 577127 - f 79 -8.5 -4.17263 | opp_overlap 577127 577119 TAATAATTAGATAAA GTTCGAT AATT ATCGAAC TTTTTTTATTATTCT TERM 693 577202 - 577182 - f 90 -7.1 -5.31519 | opp_overlap 577182 577180, overlap 577176 ATATTTAAATAAAAA TTTTTTTAA AAG TTAAAAAAA TATTGCTTATTAAAA TERM 694 578213 - 578187 - g 73 -2.4 -5.79595 | opp_overlap 578196, overlap 578191 578199 TTTTAAAAGAAAAAA TTAATAAACTAA CTG TTGGTTTACCAA AAGATAATTGTGATA gapN 577274 - 578689 + | glyceraldehyde-3-phosphate dehydrogenase (NADP) TERM 695 578701 - 578731 + F 81 -7 -4.89521 | opp_overlap 578706, overlap 578706 578725 TTAATATAATAGTTA AAAAATCCAAGC AAAATCA GCTTGGATTTTA TTTTATTTAAAATCT TERM 696 578706 - 578726 + F 87 -6.9 -5.34857 | opp_overlap 578706, overlap 578701 578725 ATAATAGTTAAAAAA TCCAAGC AAAATCA GCTTGGA TTTTATTTTATTTAA TERM 697 578726 - 578706 - f 83 -6.9 -5.17054 | opp_overlap 578701 578706 578725 ATAATAGTTAAAAAA TCCAAGC AAAATCA GCTTGGA TTTTATTTTATTTAA TERM 698 580090 - 580075 - g 88 -4.8 -5.89947 | overlap 580089 TAAAGGCAAAAAAAA CATTAA TAAA TTAATG TTAGGGAAACTAACA TERM 699 580491 - 580506 + G 74 -4.8 -5.22481 | opp_overlap 580489 580491 580501, overlap 580501 CTTTATATAAAATTA CTTTTA ATGA TAAAAG TTTTATTTATTTATG parE 578876 - 580807 + | DNA topoisomerase IV subunit B TERM 700 582528 - 582516 - g 74 -6.3 -4.59376 | ACTAGTAAATGAAAA GAACA AGG TGTTC ATATAAACAGTGTAG TERM 701 583455 - 583444 - g 76 -3 -5.9667 | opp_overlap 583444 AAAAAGATAAAAAAA CTAA ACAA TTAG ATTTTGAAGATTATT parC 580809 - 583505 + | topoisomerase IV subunit A TERM 702 583507 - 583523 + F 100 -8.1 -6.01187 | opp_overlap 583507 AAGATGATAATTAAA GTTCAAA TTA TTTGAAC TTTTTTTATTTAATT TERM 703 583523 - 583507 - f 79 -8.1 -4.03782 | opp_overlap 583507 AAGATGATAATTAAA GTTCAAA TTA TTTGAAC TTTTTTTATTTAATT TERM 704 585701 - 585686 - g 70 -2.6 -5.59357 | ACTAGAGCAAAAAAA CAACTA ATAG TAATTG GTGATTTTGACTTGT recD 583601 - 585796 + | exodeoxyribonuclease V alpha subunit TERM 705 585831 - 585810 - T 93 -7.4 -5.64421 | opp_overlap 585810 AGTGTAAATAAAAAA GTCATAAG TTAGAC CTTATGAC TTTTTATTAGTTCTT TERM 706 585810 - 585831 + T 87 -7.4 -5.23396 | opp_overlap 585810 AGTGTAAATAAAAAA GTCATAAG TTAGAC CTTATGAC TTTTTATTAGTTCTT MSC_0513 586206 - 585838 - | hypothetical protein TERM 707 586226 - 586254 + r 80 -3.1 -5.89947 | opp_overlap 586226 ACTAAATTTAATCCA GCTGCAACTTCTA ATA TAATAGTTGAAGC TTTTTTTTAGATTTG MSC_0514 586485 - 586363 - | hypothetical protein MSC_0515 587372 - 586464 - | hypothetical protein TERM 708 587520 - 587510 - H 70 -2.6 -5.54894 | AATCTAGTAAAAAAA TAAT AAT ATTA AAACTAACTAATAAT TERM 709 588219 - 588201 - g 100 -6.8 -6.11229 | opp_overlap 588199 588201 ACTAAAACAAAAAAA CAAGCTTT TTT AAAACTTG TATTTTTATGTTTAT gtsA 587730 - 588950 + | glycerol ABC transporter, ATP-binding component TERM 710 588996 - 588978 - g 78 -7.6 -4.2793 | overlap 588981 ATTTAAACAAAAAGA TAGTTTTA ATT TAAAACTA AAATTAAAAAAATCA gtsB 588928 - 589956 + | glycerol ABC transporter, permease component TERM 711 589967 - 589947 - g 70 -4.2 -5.02715 | ATATGAAAGCAAAAA TAATAATT AAAGA AATTATTA AATACTTATTAATTG gtsC 589934 - 590743 + | glycerol ABC transporter, permease component TERM 712 590725 - 590772 + F 100 -11.6 -5.33921 | opp_overlap 590725 GAGTTTTTCTAAAAA GATAGGTAGATTTAATTAGTAA GTTT TTACTAAATAAAACTACCTTTC TTTTTTAATTAATTT TERM 713 590772 - 590725 - f 100 -11.6 -4.57073 | opp_overlap 590725 GAGTTTTTCTAAAAA GATAGGTAGATTTAATTAGTAA GTTT TTACTAAATAAAACTACCTTTC TTTTTTAATTAATTT TERM 714 592250 - 592215 - g 72 -7.8 -3.524 | GAGGGACTGATATAA CTCCATCAAAGACT AATCCAGG AATCTTTGATGAAG GTGGTTCAAGCATTC lppB 590870 - 592738 + | prolipoprotein B TERM 715 592765 - 592781 + T 100 -8.1 -6.14618 | opp_overlap 592765 ATAATTCTTTAAAAA GTTAGTT AAA AACTAAC TTTTTTTATTTTCTA TERM 716 592781 - 592765 - T 85 -8.1 -4.60255 | opp_overlap 592765 ATAATTCTTTAAAAA GTTAGTT AAA AACTAAC TTTTTTTATTTTCTA TERM 717 592822 - 592808 - T 70 -4.4 -5.04325 | opp_overlap 592808 592810 592812, overlap 592802 TCTAAATCATAAAAA TATTTT AAA AAAATA ACTTTTTTAGTATAT TERM 718 592921 - 592931 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 594623 - 592950 - | IS1634AD transposase TERM 719 594179 - 594207 + g 91 -8.3 -5.04356 | opp_overlap 594187, overlap 594184 594205 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 720 594184 - 594202 + g 79 -9 -3.48824 | opp_overlap 594187, overlap 594179 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 721 594719 - 594685 - H 75 -3.8 -5.60993 | gap 2, overlap 594665 594664 594687 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 722 594718 - 594687 - H 86 -8.9 -4.45201 | gap 1, overlap 594665 594664 594685 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 723 595131 - 595115 - H 85 -8.1 -4.60255 | opp_overlap 595115 ATAATTCTTTAAAAA GTTAGTT AAA AACTAAC TTTTTTTATTTTCTA TERM 724 595115 - 595131 + H 100 -8.1 -6.14618 | opp_overlap 595115 ATAATTCTTTAAAAA GTTAGTT AAA AACTAAC TTTTTTTATTTTCTA TERM 725 595172 - 595158 - H 70 -4.4 -5.04325 | opp_overlap 595158 595160 595162, overlap 595152 TCTAAATCATAAAAA TATTTT AAA AAAATA ACTTTTTTAGTATAT TERM 726 595319 - 595346 + G 83 -6.5 -5.1675 | gap 1, opp_overlap 595319, overlap 595321 TATTAACCGCATCAA CT-CTACTAGTT ATACC AACTAGTAGTAG TTTTTTAATAAATAA TERM 727 595321 - 595343 + G 82 -9.3 -3.41701 | opp_overlap 595319, overlap 595319 TTAACCGCATCAACT CTACTAGTT ATACC AACTAGTAG TAGTTTTTTAATAAA MSC_0521 595273 - 595425 + | hypothetical protein MSC_0522 595676 - 597226 + | putative surface located membrane protein TERM 728 597573 - 597557 - g 72 -8.1 -3.16689 | opp_overlap 597557 597559, overlap 597555 AAAATTTGATCAAGA CATTTCA AAG TGAAATG TATCTAGTGCTAAAA TERM 729 597557 - 597573 + G 71 -8.1 -2.96216 | opp_overlap 597555 597557, overlap 597559 AAAATTTGATCAAGA CATTTCA AAG TGAAATG TATCTAGTGCTAAAA MSC_0523 597219 - 598679 + | hypothetical protein TERM 730 598748 - 598792 + T 93 -7.3 -5.64321 | opp_overlap 598749 598752 598754, overlap 598749 598754 AAATTTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 731 598749 - 598791 + T 95 -10.8 -3.94933 | opp_overlap 598749 598752 598754, overlap 598748 598754 AATTTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 732 598754 - 598786 + T 100 -10.7 -4.88326 | opp_overlap 598752 598749 598754, overlap 598749 598748 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT MSC_0526 601397 - 600219 - | NADH dependent flavin oxidoreductase TERM 733 600994 - 601014 + g 70 -2.6 -5.52986 | GGTAGTTCTAAAACT TCATGTTC AATTG GAGTATGA TTTTTTTCATAAGAT lplA 602434 - 601397 - | lipoate-protein ligase A TERM 734 602417 - 602433 + g 74 -5.1 -5.17054 | TTTACCATTTCTAAT TGGTTCT ATT AGTACCA TTTTTTACCTCTTCT MSC_0528 603269 - 602412 - | hypothetical protein gcdH 603615 - 603271 - | glycine cleavage system H protein TERM 735 603455 - 603432 - G 73 -6.8 -4.35524 | opp_overlap 603434, overlap 603435 TTTTTAAATTTAAAA TAGCTTTTGA AGCT TCTAAAGCTA AAAAGATATCATCTT lip2 603802 - 604593 + | triacylglycerol lipase lip3 604596 - 605396 + | triacylglycerol lipase TERM 736 605408 - 605422 + T 70 -7.2 -3.73281 | opp_overlap 605394 ATAAAAAAGATGATT TCTAAC TTA GTTAGA TTTAAATCATCTTTT TERM 737 605550 - 605497 - T 76 -2.8 -5.93252 | gap 1, opp_overlap 605497 605505, overlap 605501 605512 TTTAAAAAGAAAAAA TAATCA-AATAAAAAATGCAGGTGT AGAGA AAACCCGCATTTTTTATTATTGTTA TTATCTTTTTATTAT TERM 738 605505 - 605541 + T 79 -8.2 -4.14147 | opp_overlap 605501 605497 605512, overlap 605497 GAAAAAATAATCAAA TAAAAAATGCAGGTGT AGAGA AAACCCGCATTTTTTA TTATTGTTATTATCT TERM 739 605534 - 605512 - T 79 -4.1 -5.72053 | opp_overlap 605505 605497, overlap 605501 605497 TAATCAAATAAAAAA TGCAGGTGT AGAGA AAACCCGCA TTTTTTATTATTGTT ldh 606576 - 605620 - | L-lactate dehydrogenase nagA 607785 - 606628 - | N-acetylglucosamine-6-phosphate deacetylase MSC_0534 607879 - 608688 + | hypothetical protein TERM 740 608672 - 608694 + T 90 -6.4 -5.6473 | opp_overlap 608672 AGAAAAAAGAAAAAA TCGTAACT TCAAATT AGTTACGA TTTTTTTAATCTTCT TERM 741 608694 - 608672 - T 100 -6.4 -6.07374 | opp_overlap 608672 AGAAAAAAGAAAAAA TCGTAACT TCAAATT AGTTACGA TTTTTTTAATCTTCT MSC_0535 609284 - 608700 - | hypothetical protein MSC_0536 609681 - 609289 - | hypothetical protein MSC_0537 610936 - 610025 - | hypothetical protein TERM 742 611254 - 611264 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 612956 - 611283 - | IS1634AB transposase TERM 743 612512 - 612540 + g 91 -8.3 -5.04356 | opp_overlap 612520, overlap 612517 612538 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 744 612517 - 612535 + g 79 -9 -3.48824 | opp_overlap 612520, overlap 612512 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 745 613052 - 613018 - H 75 -3.8 -5.60993 | gap 2, overlap 612998 612997 613020 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 746 613051 - 613020 - H 86 -8.9 -4.45201 | gap 1, overlap 612998 612997 613018 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG MSC_0539 613195 - 615021 + | hypothetical protein TERM 747 615076 - 615028 - T 83 -6.2 -5.38321 | opp_overlap 615042, overlap 615032 615042 AAATATTAGAAAAAA TAAATATAATAAAAGGCTTGGA AATTA TCCAAGCCTTTGTTTTTAATTA GAAGATTCAGTAGTA TERM 748 615072 - 615032 - T 87 -7 -5.1471 | opp_overlap 615042, overlap 615028 615042 ATTAGAAAAAATAAA TATAATAAAAGGCTTGGA AATTA TCCAAGCCTTTGTTTTTA ATTAGAAGATTCAGT TERM 749 615042 - 615062 + T 100 -11.2 -4.96773 | opp_overlap 615032 615028 615042 ATAAATATAATAAAA GGCTTGGA AATTA TCCAAGCC TTTGTTTTTAATTAG TERM 750 615062 - 615042 - T 100 -11.2 -4.96657 | opp_overlap 615042, overlap 615032 615028 ATAAATATAATAAAA GGCTTGGA AATTA TCCAAGCC TTTGTTTTTAATTAG lpp 615609 - 615070 - | prolipoprotein rpsU 615888 - 616052 + | 30S ribosomal protein S21 TERM 751 616074 - 616089 + F 84 -4.7 -5.77632 | opp_overlap 616074 ATAATTTATAATTAA GAGTC TTTGCT GACTC TTTTTTTATACTTTT ruvA 616160 - 616720 + | holliday junction DNA helicase RuvA ruvB 616737 - 617660 + | Holliday junction DNA helicase B TERM 752 618855 - 618842 - g 73 -6.7 -4.30416 | ATGATTAATTCAAAA GCTCT TCCT AGAGC TCATGCTGATGGAAT pdhD 617738 - 619096 + | dihydrolipoamide dehydrogenase MSC_0545 619249 - 619112 - | hypothetical protein MSC_0546 619884 - 619303 - | hypothetical protein TERM 753 619732 - 619722 - G 73 -5.4 -4.81551 | opp_overlap 619722 TATTTATATCAAAAA GATC ATA GATC ATTTCTTGAAATCTA MSC_0547 619986 - 620915 + | hypothetical protein TERM 754 621426 - 621394 - g 79 -5 -5.51353 | TAAAAATAATAAAAA CCAACAATACTT TATTGGAGC AAGTAATGTTGG TAAATCTAGTTTGAT MSC_0548 620924 - 622027 + | GTPase of unknown function dinP 623258 - 622050 - | DNA polymerase IV TERM 755 622949 - 622963 + g 81 -7.2 -4.76075 | opp_overlap 622939 622949 AATAAGCTTCATCAA TTGAAG CAA CTTCAA TTTTATTAGTATAAT TERM 756 623520 - 623498 - g 95 -9.4 -4.78512 | opp_overlap 623492 623504, overlap 623492 AAAAACAAATCAAAA TATTAACATA ACT TATGTTAATA AAATGATTACTAATA TERM 757 625822 - 625811 - g 70 -3 -5.52347 | AATAAAACCAAAAAA GATT TCAG AATC ATCAATTATAAATAA MSC_0550 623406 - 626150 + | hypothetical protein TERM 758 626169 - 626190 + T 89 -8.8 -4.68994 | opp_overlap 626169 ATTAGATATAAAAAA GCGTTACT TTTTTT AGTAACGC TTTTTAAATAATCCT TERM 759 626190 - 626169 - T 100 -8.8 -5.43414 | opp_overlap 626169 ATTAGATATAAAAAA GCGTTACT TTTTTT AGTAACGC TTTTTAAATAATCCT TERM 760 626262 - 626272 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 627964 - 626291 - | IS1634AA transposase TERM 761 627520 - 627548 + g 91 -8.3 -5.04356 | opp_overlap 627528, overlap 627525 627546 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 762 627525 - 627543 + g 79 -9 -3.48824 | opp_overlap 627528, overlap 627520 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 763 628059 - 628025 - R 70 -3.8 -5.24129 | gap 2, overlap 628006 628005 628027 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 764 628058 - 628027 - R 84 -8.9 -4.25873 | gap 1, overlap 628006 628005 628025 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 765 628118 - 628139 + r 89 -8.8 -4.68994 | opp_overlap 628118 ATTAGATATAAAAAA GCGTTACT TTTTTT AGTAACGC TTTTTAAATAATACT TERM 766 628139 - 628118 - R 100 -8.8 -5.43414 | opp_overlap 628118 ATTAGATATAAAAAA GCGTTACT TTTTTT AGTAACGC TTTTTAAATAATACT udk 628796 - 628179 - | uridine kinase MSC_0553 629260 - 628820 - | hypothetical protein MSC_0554 630718 - 629333 - | Xaa-His dipeptidase TERM 767 629496 - 629509 + g 71 -5.3 -4.63479 | opp_overlap 629502, overlap 629502 GCATAAGTTCCTCCA CCAAT AGCA ATTGG TTTTGCTTTATAGTC TERM 768 629607 - 629628 + g 70 -3.1 -5.30686 | CTATTATCAATTTTT TTAACTTCT AATG ATAAGTTAA TTTTTTCTAAATATT MSC_0555 631518 - 630838 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 769 631574 - 631548 - R 83 -11.1 -2.74523 | opp_overlap 631547 631553, overlap 631553 TTAGTTCTAACATTA TAAAACAACCT ATTAA AGGTTGTTTTA GTCTAATTTTTAAAA TERM 770 631569 - 631553 - R 75 -6.6 -4.55023 | opp_overlap 631553 631547, overlap 631548 TCTAACATTATAAAA CAACCT ATTAA AGGTTG TTTTAGTCTAATTTT TERM 771 631553 - 631569 + r 75 -6.6 -4.41797 | opp_overlap 631548 631553, overlap 631547 TCTAACATTATAAAA CAACCT ATTAA AGGTTG TTTTAGTCTAATTTT MSC_0556 632452 - 631577 - | ROK family protein TERM 772 632057 - 632069 + g 76 -6.3 -4.86773 | opp_overlap 632056, overlap 632067 TCCAGTTCCTAAAGT TAGTG TGA CACTA TTTTTAATAGTTTTA TERM 773 632067 - 632079 + g 70 -4.9 -4.90079 | opp_overlap 632056, overlap 632057 AAAGTTAGTGTGACA CTATT TTT AATAG TTTTATTATTGACAT MSC_0557 632892 - 632491 - | hypothetical protein MSC_0558 634604 - 632901 - | sodium/solute symporter family protein nal 635493 - 634606 - | N-acetylneuraminate lyase rpmA 635938 - 635657 - | 50S ribosomal protein L27 MSC_0561 636254 - 635940 - | hypothetical protein rplU 636559 - 636257 - | 50S ribosomal protein L21 MSC_0563 637168 - 636764 - | hypothetical protein MSC_0564 638015 - 637128 - | tetrapyrrole methylas family protein TERM 774 638085 - 638056 - R 80 -8.1 -4.29326 | opp_overlap 638064, overlap 638064 TTTAAATTTAATAAA TAAAAAAATAGTC ATAA GACTATTTTTTTT GCTTGTGGGTTTCAT TERM 775 638064 - 638077 + r 90 -5.3 -5.98781 | opp_overlap 638064 638056 TAATAAATAAAAAAA TAGTC ATAA GACTA TTTTTTTTGCTTGTG TERM 776 638077 - 638064 - R 95 -5.3 -6.08342 | opp_overlap 638064, overlap 638056 TAATAAATAAAAAAA TAGTC ATAA GACTA TTTTTTTTGCTTGTG TERM 777 638369 - 638381 + r 74 -6.3 -4.60678 | opp_overlap 638368 638369 AGTTTATGGTTAAAC TCTCA GAA TGAGA TTTATTATCTTTTTA TERM 778 638579 - 638623 + r 93 -7.3 -5.64321 | opp_overlap 638580 638583 638585, overlap 638580 638585 AAATTTTTTAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 779 638580 - 638622 + r 95 -10.8 -3.94933 | opp_overlap 638580 638583 638585, overlap 638579 638585 AATTTTTTAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 780 638585 - 638617 + r 100 -10.7 -4.88326 | opp_overlap 638583 638580 638585, overlap 638580 638579 TTTAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT TERM 781 639967 - 640001 + r 75 -3.8 -5.60993 | gap 2, overlap 639968 639997 639998 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 782 639968 - 639999 + r 86 -8.9 -4.45201 | gap 1, overlap 639967 639997 639998 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 783 640506 - 640478 - R 91 -8.3 -5.04356 | opp_overlap 640486, overlap 640468 640483 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 784 640501 - 640483 - R 79 -9 -3.48824 | opp_overlap 640486, overlap 640478 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 785 641769 - 641759 - R 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC MSC_0568 642340 - 641975 - | hypothetical protein MSC_0569 642378 - 642599 + | hypothetical protein lpp 643349 - 642675 - | prolipoprotein tnp 644858 - 643446 - | transposase ISMmy1F TERM 786 643591 - 643608 + g 73 -3.5 -5.55769 | gap 1, overlap 643594 CTATTGTCAAGAACG CCA-CTAT TTA ATAGGTGG TTTTTTATTCTGCAA TERM 787 644010 - 644038 + g 73 -5.5 -4.8543 | opp_overlap 644014 644019, overlap 644008 ATTAAATCCAGATTT TAAATTAAACTTT TTA AAAGTATGATTTA TTTTTATAGGGATTA TERM 788 644978 - 644960 - H 93 -7.5 -5.12707 | opp_overlap 644959 644962 644977 TGAAATTGGAAAAAA TAGAGCT TTTTT AGCTCTA AATTTAAGAAAATTT TERM 789 645518 - 645496 - g 74 -5 -5.22312 | opp_overlap 645506, overlap 645498 645506 ATTCATATCAAAAAA TATTTGAAAA CGT TTTTCAAAAA TACGGTTATCCTATG TERM 790 645516 - 645498 - g 78 -7.6 -4.23988 | opp_overlap 645506, overlap 645496 645506 TCATATCAAAAAATA TTTGAAAA CGT TTTTCAAA AATACGGTTATCCTA MSC_0572 645420 - 645590 + | hypothetical protein TERM 791 645892 - 645876 - T 100 -9.5 -5.47159 | opp_overlap 645876 TTTGAATATAAAAAA TGGATGT TTT ACATCCA TTTGAATTATTAACT TERM 792 645876 - 645892 + T 86 -9.5 -3.8579 | opp_overlap 645876 TTTGAATATAAAAAA TGGATGT TTT ACATCCA TTTGAATTATTAACT MSC_0573 646598 - 645906 - | hypothetical protein MSC_0574 647341 - 646625 - | hypothetical protein TERM 793 647517 - 647500 - H 87 -4.1 -6.17184 | overlap 647514 ATTATCAAAAAAAAA CAAGCCT TTAA AAGCTCG TTAACAAGTTCTGTA TERM 794 647555 - 647569 + H 80 -8.6 -4.30719 | opp_overlap 647555 TAAGTATAATAAAAA GCCTAT AGA ATAGGC TTTATTATAAGAAAA TERM 795 647569 - 647555 - H 95 -8.6 -5.24416 | opp_overlap 647555 TAAGTATAATAAAAA GCCTAT AGA ATAGGC TTTATTATAAGAAAA TERM 796 648843 - 648833 - g 83 -4 -5.94743 | TAAAAAAAACAAAAA TAGT AAA ACTA AAAAAGAAAGATGAA MSC_0575 648468 - 649493 + | hypothetical protein TERM 797 649503 - 649518 + T 100 -6.2 -6.23545 | opp_overlap 649503 AAATAATAAATTTAA TGAACT TTTA AGTTCA TTTTTTTTATTTAAA TERM 798 649587 - 649549 - T 100 -10.6 -4.90136 | opp_overlap 649555 649559, overlap 649555 AATTAATATTAAAAA CACAAATAAACATGTCTT TTT AAGACATGTTTATTTTCA AATATGGTCCCCAAG TERM 799 649555 - 649581 + T 100 -14 -4.17657 | opp_overlap 649549 649555, overlap 649559 TATTAAAAACACAAA TAAACATGTCTT TTT AAGACATGTTTA TTTTCAAATATGGTC TERM 800 649581 - 649555 - T 100 -14 -4.58297 | opp_overlap 649555 649559, overlap 649549 TATTAAAAACACAAA TAAACATGTCTT TTT AAGACATGTTTA TTTTCAAATATGGTC TERM 801 649559 - 649577 + T 100 -10.4 -4.67651 | opp_overlap 649555 649549, overlap 649555 AAAAACACAAATAAA CATGTCTT TTT AAGACATG TTTATTTTCAAATAT MSC_0576 650767 - 650144 - | hypothetical protein TERM 802 650831 - 650804 - R 89 -9.4 -4.29139 | opp_overlap 650809, overlap 650809 TTAAATTTAAAATAA CAAAATTGTTGA TTAA TCAACAATTTTA AATAGATCTTTAATT TERM 803 650826 - 650809 - R 87 -7.1 -5.093 | opp_overlap 650809, overlap 650804 TTTAAAATAACAAAA TTGTTGA TTAA TCAACAA TTTTAAATAGATCTT TERM 804 650809 - 650826 + r 75 -7.1 -4.20932 | opp_overlap 650804 650809 TTTAAAATAACAAAA TTGTTGA TTAA TCAACAA TTTTAAATAGATCTT plsC 651763 - 650816 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase acpS 652282 - 651950 - | holo-[acyl-carrier-protein] synthase MSC_0579 651954 - 652352 + | hypothetical protein MSC_0580 653351 - 653181 - | hypothetical protein TERM 805 653457 - 653415 - R 77 -5.2 -5.4505 | CTTTTCAATAAAAAA GATATAAAAATTAATCTT TTACTTT AAGACTAATTTCAATATC TGGTAATTTTATATA dctD 653907 - 653425 - | dCMP deaminase MSC_0582 655220 - 653910 - | hypothetical protein rluD 656136 - 655204 - | ribosomal large subunit pseudouridylate synthase D lsp 656725 - 656117 - | Signal peptidase II ileS 659463 - 656716 - | isoleucyl-tRNA synthetase TERM 806 659508 - 659491 - R 100 -7.7 -6.20267 | opp_overlap 659491, overlap 659505 CTAAAAACAAAAAAA TCACTCC AAAA GGAGCGA TTTACCGCGGTACCA TERM 807 660075 - 660057 - R 85 -6.1 -5.61824 | opp_overlap 660052 660057 TAAAATGTAAAAAAA TAAGCTT ATAAA AAGCTTA TTTTCTAGTTCTATT TERM 808 660057 - 660075 + r 74 -6.1 -4.60977 | opp_overlap 660057, overlap 660052 TAAAATGTAAAAAAA TAAGCTT ATAAA AAGCTTA TTTTCTAGTTCTATT MSC_0586 661203 - 660214 - | hypothetical protein MSC_0587 661632 - 661216 - | hypothetical protein ftsZ 662804 - 661644 - | cell division protein FtsZ TERM 809 661793 - 661811 + g 74 -8.2 -3.38068 | overlap 661783 TACTTGGTTGAGCTT GTTGAACT ACA GGTTCAAC TCTTGGTGTTTTTAT MSC_0589 663839 - 662859 - | hypothetical protein TERM 810 663494 - 663522 + g 89 -9.9 -3.55203 | overlap 663495 AGCAAACAATTCTTG GTTTTATAAATAA AAT TTGTTTATAAAAC TTTCAAAAAAGTTTT TERM 811 663608 - 663623 + g 73 -3.4 -5.61824 | GTTTATTATTTTGAG TATTAT CAAT ATAATA TTTTTTTAAATTTTG MSC_0590 664108 - 663845 - | hypothetical protein MSC_0591 665013 - 664087 - | MraW methylase family protein TERM 812 664205 - 664179 - G 72 -9 -2.70932 | opp_overlap 664178 664179, overlap 664183 TTGGTTTTTTAATTA CTAATTTAAATT TAG AATTTAAATCAG CTTTAATTGGAAGAT MSC_0592 665423 - 665022 - | cell division protein MraZ TERM 813 665509 - 665491 - R 100 -10.4 -6.04953 | opp_overlap 665489 ACACAAATAAAAAAA GGTTGTAT TAA ATACAACC AAATTAATTAATAAT rpmF 665709 - 665530 - | 50S ribosomal protein L32 MSC_0594 666242 - 665724 - | hypothetical protein pheT 668626 - 666242 - | phenylalanine-tRNA ligase beta subunit TERM 814 667621 - 667631 + g 70 -4 -5.2166 | opp_overlap 667611 667621, overlap 667592 CAATATTTAACATAA TGTT TAA AACA TTTTTTGAGTTATTA TERM 815 667763 - 667745 - G 75 -7.6 -3.93963 | opp_overlap 667745 667744 ATCATGATTTATAAA TTCTAATT TTA AATTAGAA CTCTTTAATTTATCT pheS 669687 - 668635 - | phenylalanine-tRNA ligase alpha subunit MSC_0597 670324 - 669716 - | hypothetical protein MSC_0598 674781 - 670333 - | hypothetical protein TERM 816 673674 - 673704 + g 100 -10 -4.7908 | ATTCTGAGTTTTTAT GATTTTTATCAAAT TGA ATTTGATTAAAATC TTTATTTGTATTTTT TERM 817 674893 - 674878 - R 93 -4.7 -6.20267 | opp_overlap 674878, overlap 674884 TTAAAAATAAAAAAA GAACC ACTTAA GGTTC TTTAGAAACTGGCAG TERM 818 675297 - 675278 - R 72 -8.6 -3.21395 | gap 1, opp_overlap 675280, overlap 675281 ACTGGCGTGACAACA GGA-GCACC AGG GGTGCATCC ATTCCGGTCCTCTCG TERM 819 675293 - 675281 - R 73 -9.1 -2.80074 | opp_overlap 675280, overlap 675278 GGCGTGACAACAGGA GCACC AGG GGTGC ATCCATTCCGGTCCT TERM 820 675518 - 675534 + r 77 -7.3 -4.4715 | GGGGGAGATAAGCCT GTTATCC CCG GGGTAAC TTTTATCCGTTGAGC TERM 821 677631 - 677646 + r 73 -7.6 -3.80945 | ATCACCCTCTATGGC GCTACT TCCC AGTAGC TTCTATTATATAATG TERM 822 679518 - 679531 + r 77 -6.7 -4.58236 | overlap 679522 TCCCCATCTCATAGT GAACC AAAC GGTTC TTTTGATCTTTTCTC argS 681609 - 679945 - | arginine-tRNA ligase frr 682159 - 681611 - | ribosome recycling factor TERM 823 681721 - 681735 + g 79 -3.6 -5.73563 | overlap 681723 CACTAATTAGATCTT TTGAAA TAT TTTCGA TTTTTTTAATTTCAT pyrH 682927 - 682409 - | uridylate kinase TERM 824 683008 - 682990 - H 100 -9 -5.60993 | opp_overlap 682990 TTGTTTATAAAAAAA GTATGATT TAT AATCATAC TTTGCTGGATTGCAA TERM 825 682990 - 683008 + H 79 -9 -3.794 | opp_overlap 682990 TTGTTTATAAAAAAA GTATGATT TAT AATCATAC TTTGCTGGATTGCAA TERM 826 683130 - 683102 - H 93 -6.8 -5.86976 | opp_overlap 683080 TTAGAAAATAAAAAA GAGTTCTCAAAA GTGGA TCTGGAGAACTC ATATGAATTATATAA TERM 827 683176 - 683210 + H 75 -3.8 -5.60993 | gap 2, overlap 683177 683206 683207 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 828 683177 - 683208 + H 86 -8.9 -4.45201 | gap 1, overlap 683176 683206 683207 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 829 683715 - 683687 - g 91 -8.3 -5.04356 | opp_overlap 683695, overlap 683677 683692 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 830 683710 - 683692 - g 79 -9 -3.48824 | opp_overlap 683695, overlap 683687 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 683271 - 684944 + | IS1634CA transposase TERM 831 684973 - 684963 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 832 685032 - 685060 + T 81 -10.5 -2.53911 | opp_overlap 685037, overlap 685037 AACTGGGAAACGTAG GAAAAGTATGATT TAT AATCATACTTTGC TGGATTGCAAATTCA TERM 833 685037 - 685055 + T 79 -9 -3.794 | opp_overlap 685037, overlap 685032 GGAAACGTAGGAAAA GTATGATT TAT AATCATAC TTTGCTGGATTGCAA TERM 834 685055 - 685037 - T 84 -9 -4.33165 | opp_overlap 685037 685032 GGAAACGTAGGAAAA GTATGATT TAT AATCATAC TTTGCTGGATTGCAA TERM 835 685177 - 685149 - T 93 -6.8 -5.86976 | opp_overlap 685127 TTAGAAAATAAAAAA GAGTTCTCAAAA GTGGA TCTGGAGAACTC ATATGAATTATATAA TERM 836 685631 - 685647 + T 95 -10.9 -3.72027 | opp_overlap 685628 TGGGAAAAGAAGTGG GTCTGTC ATA GACAGAC TTATTAATACAGAGT MSC_0604 686498 - 686292 - | hypothetical protein TERM 837 686847 - 686857 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 688549 - 686876 - | IS1634BH transposase TERM 838 688105 - 688133 + g 91 -8.3 -5.04356 | opp_overlap 688113, overlap 688110 688131 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 839 688110 - 688128 + g 79 -9 -3.48824 | opp_overlap 688113, overlap 688105 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 840 688645 - 688611 - R 75 -3.8 -5.60993 | gap 2, overlap 688591 688590 688613 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 841 688644 - 688613 - R 86 -8.9 -4.45201 | gap 1, overlap 688591 688590 688611 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 842 688825 - 688843 + r 100 -9 -5.25699 | opp_overlap 688825 TTCAATTTAAAAAAA GTATGATT TAT AATCATAC TTTTTATTCTATGAT TERM 843 688843 - 688825 - R 100 -9 -5.53288 | opp_overlap 688825 TTCAATTTAAAAAAA GTATGATT TAT AATCATAC TTTTTATTCTATGAT MSC_0606 689457 - 688852 - | hypothetical protein tsf 690344 - 689457 - | elongation factor Ts TERM 844 690116 - 690106 - G 71 -5.4 -4.63218 | TTTTTTGCAACAAAA TCAG TTT CTGA ATTAACTTCTAAAAT TERM 845 690262 - 690272 + g 75 -5.4 -5.05782 | ATGTTATTATCACTT GCTT CTA AAGC TTTTTTACAATCCAT rpsB 691233 - 690847 - | 30S ribosomal protein S2 TERM 846 691438 - 691423 - R 79 -4.7 -5.53991 | opp_overlap 691423 CATTGATTAAAAAAA GCAGA AATTAA TCTGC TTATTGATCTATATT dnaJ 692557 - 691439 - | heat shock protein DnaJ (chaperone) TERM 847 692607 - 692582 - R 88 -8.5 -4.82901 | opp_overlap 692582 692588, overlap 692588 TCTTTTCTATAAAAA CAAAAACTAAC TAAT GTTAGTTTTTA TATATTTTTCTGATT TERM 848 692588 - 692601 + r 78 -5.3 -5.20633 | opp_overlap 692582 692588, overlap 692582 CTATAAAAACAAAAA CTAAC TAAT GTTAG TTTTTATATATTTTT TERM 849 692601 - 692588 - R 86 -5.3 -5.69262 | opp_overlap 692588 692582, overlap 692582 CTATAAAAACAAAAA CTAAC TAAT GTTAG TTTTTATATATTTTT dnaK 694396 - 692621 - | HEAT shock protein 70 (chaperone) grpE 695084 - 694452 - | heat shock protein GrpE hrcA 696078 - 695056 - | heat-inducible transcription repressor HrcA TERM 850 695369 - 695381 + gr 78 -6.3 -4.92756 | opp_overlap 695368 TTTTCTAACATATAT CTCAT TCC ATGAG TTTCTTTTTGCTCAT clpB 698224 - 696083 - | ATP dependant protease ClpB MSC_0614 699274 - 698387 - | HAD family hydrolase spoU 699798 - 699253 - | rRNA methylase TERM 851 699735 - 699755 + g 71 -6.9 -4.09215 | opp_overlap 699735 CACAAGTTCTCATAA TTGCTCCAA CAT TTTGAGCAA TTTCTGGTTCATATA MSC_0616 700413 - 699811 - | Ham1 family protein TERM 852 700263 - 700277 + g 82 -2.9 -6.17669 | overlap 700249 TTGCTTTTAATAAGG CATTT TGTTT AAATG TTTTTTTATTTTCTT lpp 700614 - 703112 + | prolipoprotein TERM 853 703129 - 703157 + T 95 -11.9 -3.52906 | opp_overlap 703134, overlap 703134 ATGAATTAGTTAGAA AAAAAGCAAGACT TAA AGTCTTGCTTTTA TTATCTAAAATTATA TERM 854 703152 - 703134 - T 100 -11.8 -5.64274 | opp_overlap 703129 703134 TTAGTTAGAAAAAAA GCAAGACT TAA AGTCTTGC TTTTATTATCTAAAA TERM 855 703134 - 703152 + T 100 -11.8 -4.84311 | opp_overlap 703134, overlap 703129 TTAGTTAGAAAAAAA GCAAGACT TAA AGTCTTGC TTTTATTATCTAAAA atpD 704547 - 703168 - | F0F1 ATP synthase subunit beta atpA 706094 - 704547 - | F0F1 ATP synthase subunit alpha TERM 856 705511 - 705521 + g 79 -4 -5.75945 | ATATTATAAATTCTT GAAA TGC TTTC TTTTTTTTGACCAAT MSC_0620 708411 - 706099 - | hypothetical protein TERM 857 706159 - 706206 + g 70 -6 -4.27062 | gap 1, opp_overlap 706173, overlap 706160 706177 AATAATTGTTGAAAT TGTAGTTGAAATAATAAATGTTA ATT TAGCATTT-TTATTTTTACTACG TTTAGTTTTAATTAA TERM 858 706177 - 706189 + g 73 -2.7 -5.65496 | opp_overlap 706173, overlap 706160 706159 AGTTGAAATAATAAA TGTTA ATT TAGCA TTTTTATTTTTACTA TERM 859 707931 - 707955 + g 93 -7.3 -5.77853 | opp_overlap 707930 707931 CTTTATTACTAAAAT GTTTTTTTAAC TCA GTTAAATAAAC TTTTTTTTGCAAATT TERM 860 707992 - 708009 + g 73 -2.7 -5.79588 | overlap 707985 ATATTCTTCTGATTT TTCAGTG CTAT CACTTAA TTTTTTTAATTTTGC MSC_0621 708856 - 708413 - | hypothetical protein TERM 861 708448 - 708472 + g 82 -4.5 -5.68023 | ATAGATTTTTTAACT TTAAAACATAA TAT TTATTTTTTAA TTTTTTTAATTCTAA MSC_0622 709767 - 708856 - | hypothetical protein MSC_0623 710263 - 709769 - | hypothetical protein MSC_0624 711701 - 710238 - | hypothetical protein lpp 714311 - 711732 - | prolipoprotein TERM 862 712759 - 712775 + g 85 -5.9 -5.626 | opp_overlap 712759 TCATCTTTAAGTAAC GAAAGTG GAC TACTTTC TTTTTTTATAAAGTC TERM 863 713911 - 713963 + g 75 -7.4 -4.20516 | gap 1, overlap 713916 CTAATAATAAAACTT GTAGGTATTTTTGTTCCAGTTTTCT TATT AGTAAACTG-AACAAAAATATTAAC TTTATTCCCTAAAGA TERM 864 713916 - 713958 + g 90 -10.3 -3.38162 | gap 1, overlap 713911 AATAAAACTTGTAGG TATTTTTGTTCCAGTTTTCT TATT AGTAAACTG-AACAAAAATA TTAACTTTATTCCCT MSC_0626 716587 - 714335 - | hypothetical protein TERM 865 715914 - 715936 + g 77 -6.5 -4.64763 | opp_overlap 715899 715914 715919, overlap 715929 GTGCTTAAAATATTA TTTAATTCT TTACC AGAATTAAA TTCTTTTTTAAGTAC TERM 866 715929 - 715939 + g 70 -4 -5.10497 | opp_overlap 715919 715914 715899, overlap 715914 TTTAATTCTTTACCA GAAT TAA ATTC TTTTTTAAGTACATT TERM 867 716539 - 716523 - G 71 -7.3 -3.93578 | opp_overlap 716533 CCAAATGAAACAGAA GCAGCTA AGG TAGCTAC TAAAGCTATTGTTAA TERM 868 716803 - 716835 + r 78 -7.9 -4.20454 | opp_overlap 716808, overlap 716799 716806 716808 TAGTAAATATAGTTA AAAAATCCTTTAGAT ATA ATCTAAAGGATATTA TTTGCTTATTTATTA TERM 869 716806 - 716832 + r 86 -9.6 -4.17987 | opp_overlap 716808, overlap 716803 716799 716808 TAAATATAGTTAAAA AATCCTTTAGAT ATA ATCTAAAGGATA TTATTTGCTTATTTA TERM 870 716830 - 716808 - R 100 -12.2 -5.15381 | opp_overlap 716806 716803 716799 716808 AATATAGTTAAAAAA TCCTTTAGAT ATA ATCTAAAGGA TATTATTTGCTTATT TERM 871 716808 - 716830 + r 95 -12.2 -3.65809 | opp_overlap 716808, overlap 716806 716803 716799 AATATAGTTAAAAAA TCCTTTAGAT ATA ATCTAAAGGA TATTATTTGCTTATT lpp 719415 - 716860 - | prolipoprotein TERM 872 717129 - 717101 - G 93 -12.7 -3.02144 | opp_overlap 717101 717122 717124, overlap 717122 CCAGTTTTTGCAATA TTATTAGCTGCAT GAT ATACAGCTAATAA TTTATTATCTTTTGT TERM 873 717101 - 717129 + g 100 -10.5 -4.58419 | opp_overlap 717101 717122, overlap 717122 717124 CCAGTTTTTGCAATA TTATTAGCTGCAT GAT ATACAGCTAATAA TTTATTATCTTTTGT TERM 874 717924 - 717938 + g 79 -3.6 -5.69023 | CATGAAAAATTGTAG TAATTG CAT CAGTTA TTTTTTTACTATTTT MSC_0628 721687 - 719435 - | hypothetical protein TERM 875 721544 - 721574 + g 72 -7.8 -3.64822 | overlap 721519 TAATTCAGCATCAGT TATTCCATTTGATG ATG TATCAAATGAAATA TTTGCATCAGAAAAT tnpB 722729 - 721854 - | IS1296LL transposase protein B TERM 876 721887 - 721931 + g 93 -7.3 -5.64321 | opp_overlap 721888 721891 721893, overlap 721888 721893 AAAATTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 877 721888 - 721930 + g 95 -10.8 -3.94933 | opp_overlap 721888 721891 721893, overlap 721887 721893 AAATTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 878 721893 - 721925 + g 100 -10.7 -4.88326 | opp_overlap 721893 721891 721888, overlap 721888 721887 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT tnpA 723280 - 722738 - | IS1296LL transposase protein A MSC_0631 724960 - 723524 - | hypothetical protein TERM 879 723879 - 723895 + g 70 -3.7 -5.10497 | opp_overlap 723879 TCATATTCTTTAAAT GAAGG TGGGGTT CCTTC TTTTTTAACTAGATT MSC_0632 725922 - 725479 - | hypothetical protein MSC_0633 728189 - 725937 - | hypothetical protein TERM 880 728156 - 728166 + g 79 -4 -5.75538 | opp_overlap 728156 ATAAAGCATATATTA GAAT TTT ATTC TTTTTCTTTTTTACA TERM 881 728391 - 728401 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 882 729653 - 729681 + r 91 -8.3 -5.04356 | opp_overlap 729661, overlap 729658 729679 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 883 729658 - 729676 + r 79 -9 -3.48824 | opp_overlap 729661, overlap 729653 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 884 730191 - 730157 - R 70 -3.8 -5.24129 | gap 2, overlap 730138 730137 730159 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGG TERM 885 730190 - 730159 - R 84 -8.9 -4.25873 | gap 1, overlap 730138 730137 730157 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 886 730373 - 730352 - R 87 -7.4 -5.16572 | opp_overlap 730352 730350 ATCTAAGTTAAAAAA TCCTTTAG AACAAG CTAAAGGA TCTTTCATATCTTAT lpp 732973 - 730385 - | prolipoprotein TERM 887 731713 - 731725 + g 72 -4.9 -4.97159 | CAGATTCTGAAGTTT GAAAA ATC TTTTC TTCTTTTTTCTTTTT MSC_0636 733524 - 732994 - | hypothetical protein MSC_0637 735256 - 733751 - | hypothetical protein TERM 888 735390 - 735406 + r 76 -8.1 -3.7795 | opp_overlap 735390 ACATAAAAATAAAAA TCTACTT TAG AAGTAGA TTTAGTCAAATTTAA TERM 889 735406 - 735390 - R 100 -8.1 -5.71295 | opp_overlap 735390 ACATAAAAATAAAAA TCTACTT TAG AAGTAGA TTTAGTCAAATTTAA MSC_0638 735569 - 735408 - | hypothetical protein MSC_0639 736137 - 735721 - | hypothetical protein MSC_0640 736652 - 736155 - | hypothetical protein MSC_0641 737119 - 736790 - | hypothetical protein MSC_0642 737337 - 737110 - | hypothetical protein MSC_0643 737804 - 737340 - | hypothetical protein TERM 890 738175 - 738193 + r 70 -7.6 -3.30112 | opp_overlap 738177, overlap 738174 TAAATAATGTTAAGT TATTAGTT TAA AACTAATA CTTTCTTCTTAATTG TERM 891 738352 - 738364 + r 83 -6.3 -5.33405 | opp_overlap 738351 CTTTATTAATTGAAC CTAGA ATT TCTAG TTTTTGTTTAATCAC fbaA1 739177 - 738332 - | fructose-bisphosphate aldolase class-II MSC_0645 739380 - 740114 + | DeoR family sucrose PTS repressor TERM 892 741249 - 741236 - g 71 -8.1 -3.06686 | opp_overlap 741234 741233, overlap 741233 AGTGTAGATAAATCA GCAGC TATT GCTGC AGCTTTACCTGGAAT pts 740123 - 742009 + | PTS system, sucrose-specific IIBC component fruK 742022 - 742396 + | 1-phosphofructokinase MSC_0648 743444 - 742932 - | hypothetical protein TERM 893 743017 - 742984 - G 100 -15.7 -3.68908 | opp_overlap 742984 742990, overlap 742990 AAAGACTTATGGAAA TTAAAAGGAGATTTA ATAT TAAATCTCCTTTTAA TTTTTAGTGGCAGTG TERM 894 742984 - 743017 + g 100 -15.7 -4.72986 | opp_overlap 742984 742990, overlap 742990 AAAGACTTATGGAAA TTAAAAGGAGATTTA ATAT TAAATCTCCTTTTAA TTTTTAGTGGCAGTG TERM 895 742990 - 743011 + g 100 -10.3 -4.80167 | opp_overlap 742990 742984, overlap 742984 TTATGGAAATTAAAA GGAGATTTA ATAT TAAATCTCC TTTTAATTTTTAGTG TERM 896 743011 - 742990 - G 100 -10.3 -4.56914 | opp_overlap 742984 742990, overlap 742984 TTATGGAAATTAAAA GGAGATTTA ATAT TAAATCTCC TTTTAATTTTTAGTG TERM 897 743534 - 743513 - R 100 -6.7 -6.47325 | opp_overlap 743513 AAAAAATAAAAAAAA TAGTCTACT TCAA AATAGACTA TTTCATAAATTATTA recD 744503 - 743547 - | exodeoxyribonuclease V alpha chain TERM 898 743622 - 743634 + g 70 -4.1 -5.1963 | AACAAGTGTTGTATC TCTTG TTT CAGGA TTTTTATTAATTCCA MSC_0650 745811 - 745179 - | hypothetical protein TERM 899 745858 - 745872 + r 73 -4.4 -5.18371 | opp_overlap 745864 TTTTTTAAAAGATTT TTATAA GTC TTATAA TTTTATTTTATAAAA MSC_0651 746322 - 746212 - | hypothetical protein MSC_0652 747109 - 746732 - | hypothetical protein TERM 900 746758 - 746774 + g 73 -5.3 -4.75356 | AAACTTTTTCAATTT TAAAATT ATT AATTTTA TTTTTAACTGTATTT TERM 901 747169 - 747138 - R 86 -5.4 -5.71712 | opp_overlap 747156 TTCTACATAAAAAAA TATTTAAACAAACA TAAT TATTTGTCCAAATA TTTTGTCCTAGTTTA lpp 748339 - 747182 - | prolipoprotein TERM 902 747562 - 747546 - GR 73 -6.7 -4.27192 | AAATCTTGATTAAAA TTTTTTG CTC CAAAAAA CATAGCAGACATATC MSC_0654 748595 - 748212 - | hypothetical protein TERM 903 748709 - 748719 + H 70 -2.6 -5.51353 | CTTGTTCTAGTTTAT TAAT TCT ATTA TTTTTATTATTTTTA MSC_0655 748810 - 749178 + | hypothetical protein TERM 904 749421 - 749437 + F 71 -5.3 -4.58773 | overlap 749410 TTAGTTATTTTTTTA TAAAAAT GAA ATTTTTA TTTTGCTTTGATCAG MSC_0656 749513 - 751444 + | hypothetical protein MSC_0657 751526 - 751882 + | hypothetical protein MSC_0658 752052 - 754193 + | hypothetical protein TERM 905 754359 - 754315 - f 74 -9 -2.94527 | overlap 754312 754323 CAATATAGATAATGA TTATTTAATTCCAATAGATT TAGAT AATCCATTAGAATTAAAAAA TACCAATTTATTAGA MSC_0659 754610 - 755095 + | Fic family protein TERM 906 755277 - 755321 + F 72 -9.1 -2.50387 | opp_overlap 755255, overlap 755271 AAAAAGTAAGCACTT TTTAAAAAAATAACTAAATAT TGT ATATTTTTTTATTTTTTTAAA GGTTCTTTTGTAAAA MSC_0660 755377 - 755532 + | hypothetical protein TERM 907 755825 - 755807 - f 81 -7.6 -4.42513 | opp_overlap 755807 755805 AAGGACAAATAGAAA TTAGTTTT AAA AAAACTAA TGTTGATCAAATTTT TERM 908 756318 - 756297 - f 73 -4.5 -5.1925 | overlap 756299 CCAGAACCTAAAAAA GATCAAGAA AAAG TTCTTGATA AAAATGATAAAACTG TERM 909 756316 - 756299 - f 75 -7.1 -4.21792 | overlap 756297 AGAACCTAAAAAAGA TCAAGAA AAAG TTCTTGA TAAAAATGATAAAAC MSC_0661 756522 - 756680 + | hypothetical protein tnpA 756756 - 757298 + | IS1296AB_B transposase protein A tnpB 757307 - 758155 + | IS1296AB_B transposase protein B MSC_0664 759034 - 758354 - | hypothetical protein TERM 910 759298 - 759286 - R 74 -4.9 -5.24796 | opp_overlap 759293, overlap 759293 CTGATAGAATAAAAA CTAAT AAT ATTAG TGGAACAAATATTCC MSC_0665 760708 - 759485 - | hypothetical protein TERM 911 759816 - 759826 + g 79 -4 -5.80951 | overlap 759804 759805 TTTTCTTTGAATTTT TCAA GAG TTGA TTTTTTCTTTTCAAT TERM 912 760734 - 760768 + r 70 -3.8 -5.24129 | gap 2, overlap 760735 760764 760765 ACCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 913 760735 - 760766 + r 84 -8.9 -4.25873 | gap 1, overlap 760734 760764 760765 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 914 761273 - 761245 - R 91 -8.3 -5.04356 | opp_overlap 761253, overlap 761235 761250 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 915 761268 - 761250 - R 79 -9 -3.48824 | opp_overlap 761253, overlap 761245 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 916 762532 - 762522 - R 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC MSC_0667 763399 - 762512 - | hypothetical protein TERM 917 763184 - 763151 - G 72 -6.2 -4.50902 | opp_overlap 763151 763156 763165, overlap 763159 AAAAAAGAAGATAAA TGAAATAATAGCAA TAGCAG CTGCTATTATTGCA ATTGTTTTAAATGCT TERM 918 763474 - 763490 + r 72 -8 -3.48276 | opp_overlap 763474 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 919 763490 - 763474 - R 100 -8 -5.56112 | opp_overlap 763474 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA MSC_0668 764915 - 763692 - | hypothetical protein TERM 920 764285 - 764297 + g 77 -4.9 -5.34365 | opp_overlap 764285, overlap 764269 TTTTCTTTAAATAAT GAAAA AGT TTTTC TTTTTGTTGTTCTGA TERM 921 765007 - 765042 + r 80 -8.6 -4.32607 | opp_overlap 765023 ATACTTTTTTTTGTT TGAGGTATATAAAAAT GTAT ATTTTGATATACCTTA TTTATTAAATTTTGA MSC_0669 765483 - 765280 - | hypothetical protein TERM 922 765576 - 765560 - H 78 -4.4 -5.56112 | opp_overlap 765560 AGAAAAATGAAAAAA GCAACC TAAGT AGTTGC TTATATAAAAATAAC MSC_0670 765856 - 767688 + | hypothetical protein MSC_0671 767763 - 768707 + | hypothetical protein TERM 923 768701 - 768689 - T 70 -3.5 -5.29716 | opp_overlap 768698, overlap 768698 CCAAGACAACAAAAA TAAAT ACG ATTTA AGATAAATAAATTAA TERM 924 768773 - 768817 + T 93 -7.3 -5.64321 | opp_overlap 768774 768777 768779, overlap 768774 768779 AAATTTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 925 768774 - 768816 + T 95 -10.8 -3.94933 | opp_overlap 768774 768777 768779, overlap 768773 768779 AATTTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 926 768779 - 768811 + T 100 -10.7 -4.88326 | opp_overlap 768779 768777 768774, overlap 768774 768773 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT TERM 927 768931 - 768941 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 770633 - 768960 - | IS1634AS transposase TERM 928 770189 - 770217 + g 91 -8.3 -5.04356 | opp_overlap 770197, overlap 770194 770215 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 929 770194 - 770212 + g 79 -9 -3.48824 | opp_overlap 770197, overlap 770189 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 930 770729 - 770695 - R 75 -3.8 -5.60993 | gap 2, overlap 770675 770674 770697 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 931 770728 - 770697 - R 86 -8.9 -4.45201 | gap 1, overlap 770675 770674 770695 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG tnpA 772060 - 771518 - | IS1296QT transposase protein A TERM 932 772201 - 772245 + r 89 -9.5 -4.28254 | opp_overlap 772202 772205 772207, overlap 772202 772205 772207 GAATTGTTTAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGAAGACAATCCTATTAC TTTTGAGTATTAGCA TERM 933 772244 - 772202 - R 90 -13 -2.74371 | opp_overlap 772201 772202 772205 772207, overlap 772205 772207 AATTGTTTAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGAAGACAATCCTATTA CTTTTGAGTATTAGC TERM 934 772202 - 772244 + r 95 -13 -3.1647 | opp_overlap 772202 772205 772207, overlap 772201 772205 772207 AATTGTTTAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGAAGACAATCCTATTA CTTTTGAGTATTAGC TERM 935 772205 - 772241 + r 91 -10.3 -3.71279 | opp_overlap 772205 772202 772207, overlap 772202 772201 772207 TGTTTAATATTATAA CAGGATTGTTTTCTGAA TTG TACAGAAGACAATCCTA TTACTTTTGAGTATT TERM 936 772241 - 772205 - R 91 -10.3 -3.52073 | opp_overlap 772202 772201 772205 772207, overlap 772202 772207 TGTTTAATATTATAA CAGGATTGTTTTCTGAA TTG TACAGAAGACAATCCTA TTACTTTTGAGTATT TERM 937 772207 - 772239 + r 95 -12.9 -3.4243 | opp_overlap 772207 772205 772202, overlap 772205 772202 772201 TTTAATATTATAACA GGATTGTTTTCTGAA TTG TACAGAAGACAATCC TATTACTTTTGAGTA TERM 938 772239 - 772207 - R 90 -10.7 -3.33348 | opp_overlap 772205 772202 772201 772207, overlap 772205 772202 TTTAATATTATAACA GGATTGTTTTCTGAA TTG TACAGAAGACAATCC TATTACTTTTGAGTA MSC_0675 772678 - 772373 - | hypothetical protein MSC_0676 775313 - 772695 - | hypothetical protein TERM 939 773334 - 773315 - G 78 -6.6 -4.82901 | opp_overlap 773317 TTTCTCTTACAAAAA TATTAACA AAGT TGTTAATA GTATCAAAATCAAAT MSC_0677 775876 - 775373 - | hypothetical protein pgk 777267 - 776053 - | phosphoglycerate kinase TERM 940 777376 - 777332 - R 100 -9 -5.32944 | opp_overlap 777337 777360, overlap 777337 TTGATAATTAAAAAA CAAAATCTAAACCTTTATTA AAACA TAATAAAAGTCTAGATTTTT ATTTTTTATAATGAC TERM 941 777371 - 777337 - R 100 -8.9 -5.47846 | opp_overlap 777337 777360, overlap 777332 AATTAAAAAACAAAA TCTAAACCTTTATTA AAACA TAATAAAAGTCTAGA TTTTTATTTTTTATA TERM 942 777337 - 777371 + r 82 -4.5 -5.8096 | opp_overlap 777332 777337, overlap 777360 AATTAAAAAACAAAA TCTAAACCTTTATTA AAACA TAATAAAAGTCTAGA TTTTTATTTTTTATA gap 778398 - 777382 - | glyceraldehyde-3-phosphate dehydrogenase TERM 943 778037 - 778023 - G 79 -10 -2.74248 | opp_overlap 778031, overlap 778022 778013 CAACAGTTTTTAAAT CTCCAG TTG CTGGAG CTGAAATAACCACTT TERM 944 778031 - 778065 + g 75 -7.9 -3.83998 | opp_overlap 778023 778022 778013 TTTAAATCTCCAGTT GCTGGAGCTGAAATA ACCAC TTTTTTAGCTCCTGC TTTAATGTGAGCTGA dnaI 779440 - 778502 - | primosomal protein dnaB 780634 - 779450 - | chromosome replication initiation/membrane attachment protein fpg 781615 - 780791 - | formamidopyrimidine-DNA glycosylase TERM 945 781332 - 781294 - G 78 -10 -2.5758 | opp_overlap 781299 781300, overlap 781300 GCATATCATAAAATC TAAAAACTAAATTATTAT CTA ATAATAATTCAGCTCTTA ATCATGACTTTTTAT TERM 946 781326 - 781300 - G 93 -9 -4.89729 | opp_overlap 781300 781299, overlap 781294 CATAAAATCTAAAAA CTAAATTATTAT CTA ATAATAATTCAG CTCTTAATCATGACT polA 784361 - 781626 - | DNA polymerase I TERM 947 782962 - 782979 + g 73 -2.7 -5.75945 | opp_overlap 782962 TATTTAGATTTAATA TCAAGAT CTAT ATCTGGA TTTTTTTTAACACCT dnaE 787333 - 784370 - | DNA polymerase III alpha chain TERM 948 787140 - 787150 + g 73 -5.4 -4.82162 | opp_overlap 787140, overlap 787135 AATTCAATTGTTAAA CCAA TTA TTGG TTTTATGTTATTATC TERM 949 787503 - 787524 + r 80 -6 -5.09521 | opp_overlap 787503 ATATAAACAAAAAAA TCTAAGTT TTAAAC AACTTAGA TTTTTACTTTATTAA TERM 950 787524 - 787503 - R 95 -6 -6.04953 | opp_overlap 787503 ATATAAACAAAAAAA TCTAAGTT TTAAAC AACTTAGA TTTTTACTTTATTAA TERM 951 787614 - 787624 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 789316 - 787643 - | IS1634BL transposase TERM 952 788872 - 788900 + g 91 -8.3 -5.04356 | opp_overlap 788880, overlap 788877 788898 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 953 788877 - 788895 + g 79 -9 -3.48824 | opp_overlap 788880, overlap 788872 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 954 789412 - 789378 - R 75 -3.8 -5.60993 | gap 2, overlap 789358 789357 789380 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 955 789411 - 789380 - R 86 -8.9 -4.45201 | gap 1, overlap 789358 789357 789378 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 956 789463 - 789484 + r 80 -6 -5.09521 | opp_overlap 789463 ATATAAACAAAAAAA TCTAAGTT TTAAAC AACTTAGA TTTTTACTTTATTAA TERM 957 789484 - 789463 - R 95 -6 -6.04953 | opp_overlap 789463 ATATAAACAAAAAAA TCTAAGTT TTAAAC AACTTAGA TTTTTACTTTATTAA tyrS 790732 - 789488 - | tyrosine-tRNA ligase TERM 958 790357 - 790379 + g 71 -7.2 -3.9243 | opp_overlap 790360 790363, overlap 790360 AAAAATCAATTAAGC TAATATTTGA TAA TCAAGTATTA TTATTTACAAAATTA pncB 791829 - 790741 - | nicotinate phosphoribosyltransferase pheT 792412 - 791780 - | phenylalanine-tRNA ligase MSC_0689 792463 - 793302 + | hypothetical protein MSC_0690 793286 - 794164 + | hypothetical protein TERM 959 794162 - 794192 + T 70 -7.9 -3.31232 | gap 1, opp_overlap 794162 794170, overlap 794170 GTTGCAATAGAAGAA TAAAAAA-ACTGGA CTAA TCCAGTTTTTTTTA GTTTTCTATGGCAGG TERM 960 794191 - 794162 - T 86 -9.5 -3.9644 | opp_overlap 794162 794170, overlap 794170 GTTGCAATAGAAGAA TAAAAAAACTGGA CTAA TCCAGTTTTTTTT AGTTTTCTATGGCAG TERM 961 794183 - 794170 - T 93 -6.7 -5.97979 | opp_overlap 794170 794162, overlap 794162 AGAAGAATAAAAAAA CTGGA CTAA TCCAG TTTTTTTTAGTTTTC TERM 962 794170 - 794183 + T 100 -6.7 -6.07969 | opp_overlap 794162 794170, overlap 794162 AGAAGAATAAAAAAA CTGGA CTAA TCCAG TTTTTTTTAGTTTTC TERM 963 794299 - 794285 - T 100 -8.6 -5.60993 | opp_overlap 794285 TCTCCTATAAAAAAA TCACAC AAA GTGTGA TTTAATTTCAAAATG TERM 964 794285 - 794299 + T 79 -8.6 -4.06502 | opp_overlap 794285 TCTCCTATAAAAAAA TCACAC AAA GTGTGA TTTAATTTCAAAATG fur 794928 - 794464 - | ferric uptake regulator MSC_0692 795150 - 794929 - | hypothetical protein lpp 795536 - 795174 - | prolipoprotein MSC_0694 795660 - 795523 - | hypothetical protein MSC_0695 796604 - 796332 - | hypothetical protein TERM 965 796653 - 796682 + H 93 -9.5 -4.42386 | opp_overlap 796653 796660, overlap 796660 AATCTTAATTAAAAA TAAAAAACAACAC CTAA GTGTTGTTTGTTA TTTTCTAAATGGGGC TERM 966 796682 - 796653 - H 95 -9.5 -4.87893 | opp_overlap 796653 796660, overlap 796660 AATCTTAATTAAAAA TAAAAAACAACAC CTAA GTGTTGTTTGTTA TTTTCTAAATGGGGC TERM 967 796660 - 796675 + H 83 -7.6 -4.72617 | opp_overlap 796653 796660, overlap 796653 ATTAAAAATAAAAAA CAACAC CTAA GTGTTG TTTGTTATTTTCTAA TERM 968 796675 - 796660 - H 100 -7.6 -5.95286 | opp_overlap 796660 796653, overlap 796653 ATTAAAAATAAAAAA CAACAC CTAA GTGTTG TTTGTTATTTTCTAA TERM 969 796838 - 796855 + H 82 -5.7 -5.59962 | opp_overlap 796837 796838 TTTAATCTAAAAAAG TAGTTAA AAAA TTAACTA TTTTTCTTTATTTTC pepO 797085 - 798980 + | endopeptidase O TERM 970 799003 - 798987 - f 87 -7.3 -5.19328 | ATTTGATAATAAAAA CAGGTCT TAT AAACCTG TTCCCAAAATGAAAG TERM 971 799061 - 799092 + F 93 -9 -4.90525 | opp_overlap 799061 TTTGCAATCTAGCAA CATTTAGACAAA GCAATCAG TTTGTCTAAATG TTTTGTTTAGGATTG TERM 972 799092 - 799061 - f 75 -9 -3.21912 | opp_overlap 799061 TTTGCAATCTAGCAA CATTTAGACAAA GCAATCAG TTTGTCTAAATG TTTTGTTTAGGATTG TERM 973 799429 - 799390 - f 73 -4.6 -5.26155 | overlap 799369 799417 ATACAAATACAAAAA GTATTGATAAAAGT ACCAATAAACCA ACCTTTATCAATAC AAACCACTAAAAGTA TERM 974 799615 - 799649 + F 75 -3.8 -5.60993 | gap 2, overlap 799616 799645 799646 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 975 799616 - 799647 + F 86 -8.9 -4.45201 | gap 1, overlap 799615 799645 799646 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 976 800155 - 800127 - g 91 -8.3 -5.04356 | opp_overlap 800135, overlap 800117 800132 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 977 800150 - 800132 - g 79 -9 -3.48824 | opp_overlap 800135, overlap 800127 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 799711 - 801234 + | IS1634BM transposase TERM 978 801417 - 801407 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 979 801636 - 801595 - f 75 -8.7 -3.29266 | opp_overlap 801598, overlap 801594 801597 801598 801614 AGAGTAGGACAAAAT TATTAGACTCCCTAAGGGA TAGA CCCCCTAGGGGGTCTATTT TTTTCGAAAAAGGAG TERM 980 801634 - 801597 - f 90 -11.3 -3.2043 | opp_overlap 801598, overlap 801595 801594 801598 801614 AGTAGGACAAAATTA TTAGACTCCCTAAGGGA TAGA CCCCCTAGGGGGTCTAT TTTTTTCGAAAAAGG TERM 981 801633 - 801598 - f 100 -14.8 -2.51535 | opp_overlap 801598, overlap 801597 801595 801594 801614 GTAGGACAAAATTAT TAGACTCCCTAAGGGA TAGA CCCCCTAGGGGGTCTA TTTTTTTCGAAAAAG TERM 982 801598 - 801633 + F 100 -14.1 -5.40072 | opp_overlap 801597 801595 801594 801598 801614 GTAGGACAAAATTAT TAGACTCCCTAAGGG ATAGAC CCCCTAGGGGGTCTA TTTTTTTCGAAAAAG TERM 983 801633 - 801614 - f 86 -12.2 -2.53015 | opp_overlap 801598, overlap 801598 801597 801595 801594 AGACTCCCTAAGGGA TAGACCCC CTAG GGGGTCTA TTTTTTTCGAAAAAG MSC_0698 801851 - 802186 + | hypothetical protein tnp 802312 - 802956 + | IS1138 transposase arcC 803862 - 802930 - | carbamate kinase TERM 984 803757 - 803783 + g 70 -3.1 -5.4477 | overlap 803760 TATCATTACCTTGAA CAATAAAATCT ACTAA AGATTTTGCTG TTTTTTTAACAATTT TERM 985 803907 - 803946 + r 89 -9.6 -4.25458 | opp_overlap 803907, overlap 803920 TTATCTTTTAAAAAA TTACCACTCATTATAA AGTTTTTA TTTTAATGAGTGGTAA TTTATTAATAAAATT TERM 986 803946 - 803907 - R 100 -9.6 -5.02074 | opp_overlap 803907 803920 TTATCTTTTAAAAAA TTACCACTCATTATAA AGTTTTTA TTTTAATGAGTGGTAA TTTATTAATAAAATT MSC_0701 805072 - 803978 - | agmatine deiminase TERM 987 804295 - 804309 + g 70 -7.2 -3.69469 | CTTTAATCTTACGAC CTTTAG CAT CTAAAG TATTTGTTAAAATAT MSC_0702 806495 - 805602 - | amino acid transporter TERM 988 806499 - 806513 + r 78 -4.4 -5.58051 | overlap 806486 TGTTTTAGACATATT TAAAAA TAT TTTTTA TTTTATTTTTTGTTT arcB 807613 - 806516 - | putrescine carbamoyltransferase TERM 989 807710 - 807684 - H 80 -6 -5.12707 | opp_overlap 807692, overlap 807685 TGAAATTGCAAAAAA CTTAAGTCCTTT TAA AAAGTACTTAAA AAATAAGGTTAATTT TERM 990 807709 - 807685 - H 70 -7.3 -3.6654 | opp_overlap 807692, overlap 807684 GAAATTGCAAAAAAC TTAAGTCCTTT TAA AAAGTACTTAA AAAATAAGGTTAATT abc 807844 - 808731 + | ABC transporter, ATP-binding component (Na+?) MSC_0705 808733 - 809215 + | hypothetical protein TERM 991 809365 - 809394 + G 77 -7.5 -4.07786 | gap 1, opp_overlap 809369, overlap 809369 CTATACTAAGTTTAA TAGATTTTAATAGA CTT TCTATTAAAA-CTA TTTCTGAATTTTATA TERM 992 809391 - 809369 - g 78 -9.4 -3.10879 | opp_overlap 809369 809365 ACTAAGTTTAATAGA TTTTAATAGA CTT TCTATTAAAA CTATTTCTGAATTTT TERM 993 809369 - 809391 + G 75 -9.4 -2.75876 | opp_overlap 809369, overlap 809365 ACTAAGTTTAATAGA TTTTAATAGA CTT TCTATTAAAA CTATTTCTGAATTTT MSC_0706 809208 - 809495 + | hypothetical protein TERM 994 809485 - 809538 + T 100 -11.6 -4.45517 | gap 1, opp_overlap 809488 809501, overlap 809489 809501 TTACTAAAAAAGATT TAACA-TGATAAAAAAAGAGAAGAT TTGTC ATCTTCTCTTTTTTTATCAATCTTG TTTTCTAGATGCTTT TERM 995 809534 - 809488 - T 95 -12.7 -3.36112 | opp_overlap 809485 809489 809501, overlap 809501 CTAAAAAAGATTTAA CATGATAAAAAAAGAGAAGAT TTGTC ATCTTCTCTTTTTTTATCAAT CTTGTTTTCTAGATG TERM 996 809489 - 809533 + T 100 -16.2 -3.76183 | opp_overlap 809488 809501, overlap 809485 809501 TAAAAAAGATTTAAC ATGATAAAAAAAGAGAAGAT TTGTC ATCTTCTCTTTTTTTATCAA TCTTGTTTTCTAGAT TERM 997 809501 - 809521 + T 100 -8.4 -5.65177 | opp_overlap 809488 809501, overlap 809489 809485 AACATGATAAAAAAA GAGAAGAT TTGTC ATCTTCTC TTTTTTTATCAATCT TERM 998 809521 - 809501 - T 100 -8.4 -5.70829 | opp_overlap 809501 809489 809485, overlap 809488 AACATGATAAAAAAA GAGAAGAT TTGTC ATCTTCTC TTTTTTTATCAATCT MSC_0707 810006 - 809527 - | hypothetical protein MSC_0708 811657 - 810095 - | hypothetical protein TERM 999 810814 - 810786 - G 72 -4.7 -5.03201 | overlap 810787 AAGAATAATGAAAAA CGAGAAATCTCTA TAC TAAAGATTTTTCA TCCCAACTTCTTAAA TERM 1000 811720 - 811708 - R 77 -3.4 -5.79595 | opp_overlap 811708, overlap 811701 TTGCAAAATAAAAAA GGTA TTTTC TACC TTTCTACTCAATTAC leuS 814156 - 811724 - | leucyl-tRNA synthetase TERM 1001 812902 - 812916 + g 73 -4.4 -5.10767 | AAAATAATCAATCTC TTAATT TAT AATTAA TTTTTCTCTTACCTA TERM 1002 814258 - 814243 - R 100 -9 -5.77632 | AAAAGTATAAAAAAA GACACC AATT GGTGTC AAAATTAATATTCAT TERM 1003 814308 - 814324 + r 72 -8.7 -2.62396 | opp_overlap 814303 TTGAACCAACGACCT CTCCGTT ATC AGCGGAG TGCTCTAACCAGCTG MSC_0710 816406 - 814424 - | hypothetical protein TERM 1004 815034 - 815044 + g 73 -5.4 -4.84219 | opp_overlap 815034 TCTAAATAATCAGAA CCAA AAT TTGG TTTATTTTCTAATTT TERM 1005 815230 - 815259 + g 82 -8.1 -4.43714 | opp_overlap 815229 815232 815241 TTCTTATAAGGACAT CATTTGATAAATT TGCT AATGTATCAAATG TTTGTTCTACTTTAT TERM 1006 816327 - 816361 + g 84 -8.8 -4.26202 | GATAATGATGGAATT GTAGCAACATTTGA AGTTTGA TCAAATTTTGCTAC TTTATTAATAAATGT lpp 817229 - 816417 - | prolipoprotein TERM 1007 817379 - 817361 - R 100 -11.8 -5.5454 | opp_overlap 817365 CTAAACAAATAAAAA GCAACACA AAA TGTGTTGC TCTGGAGATTAACGT TERM 1008 817407 - 817435 + r 83 -6.7 -5.23016 | overlap 817409 CGTTTTGAGTATTGA GGTGCTCTACGTG CTC CACGTAGACCATA TTTTTTACGTTCTTT TERM 1009 817409 - 817433 + r 100 -11.5 -4.21792 | overlap 817407 TTTTGAGTATTGAGG TGCTCTACGTG CTC CACGTAGACCA TATTTTTTACGTTCT rpsI 817786 - 817388 - | 30S ribosomal protein S9 rplM 818241 - 817786 - | 50S ribosomal protein L13 TERM 1010 818020 - 818034 + g 72 -3.6 -5.40072 | TGAATGGTGATAGTA GAATTT ATT AGATTC TTTTTTTCCAGAAAA MSC_0714 822525 - 818371 - | permease TERM 1011 819507 - 819517 + g 70 -2.6 -5.48787 | opp_overlap 819507 TAGTTTTAAAAACAG TAAT TTT ATTA TTTTTTATATGTTGT TERM 1012 821284 - 821295 + g 72 -3.6 -5.37043 | CATCACATAGTTAAG TGCC ATTT GGCG TTTTTTATATCCAAT truA 823366 - 822611 - | tRNA pseudouridine synthase A TERM 1013 822697 - 822720 + g 77 -6.9 -4.62168 | opp_overlap 822697, overlap 822692 CAATTCCTTGTAACA TTTCAACTA ATTTAG TAGTTGAAA TTTTATGATTTAAAT abc 824379 - 823369 - | ABC transporter, permease component (vitamin B12?) abc 825304 - 824393 - | cobalt transporter ATP-binding subunit abc 826518 - 825292 - | cobalt transporter ATP-binding subunit TERM 1014 826616 - 826599 - R 90 -4.2 -6.28967 | opp_overlap 826599 TAGAAATAAAAAAAA TAAGGT ACAAAG ACCTTA TAATTTGAGACTAGA TERM 1015 826726 - 826736 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 1016 827985 - 828013 + r 91 -8.3 -5.04356 | opp_overlap 827993, overlap 827990 828011 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1017 827990 - 828008 + r 79 -9 -3.48824 | opp_overlap 827993, overlap 827985 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1018 828525 - 828491 - R 75 -3.8 -5.60993 | gap 2, overlap 828471 828470 828493 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1019 828524 - 828493 - R 86 -8.9 -4.45201 | gap 1, overlap 828471 828470 828491 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 1020 828578 - 828561 - R 89 -4.2 -6.04953 | opp_overlap 828561 ATAGAAATAAAAAAA TAAGGT ACAAAG ACCTTA TAATTTGAGACTAGA rplQ 828948 - 828589 - | 50S ribosomal protein L17 rpoA 829921 - 828968 - | DNA-directed RNA polymerase subunit alpha rpsK 830314 - 829925 - | 30S ribosomal protein S11 TERM 1021 830262 - 830280 + g 76 -2.5 -5.83226 | ATATGTGCAATACCT TTAGGAA TATTT TTCTTAA TTTTTTTCTTAGCTT rpsM 830705 - 830340 - | 30S ribosomal protein S13 map 831915 - 831160 - | methionyl aminopeptidase adk 832556 - 831915 - | adenylate kinase TERM 1022 832686 - 832662 - R 100 -13.1 -4.28323 | opp_overlap 832669, overlap 832669 ATTAATTAATACAAA TAAAAAAGGCA TAT TGCCTTTTTTA TCAAATATGAGATGT TERM 1023 832669 - 832679 + r 83 -6.8 -5.26918 | opp_overlap 832662 832669 AATACAAATAAAAAA GGCA TAT TGCC TTTTTTATCAAATAT TERM 1024 832679 - 832669 - R 90 -6.8 -5.7827 | opp_overlap 832669, overlap 832662 AATACAAATAAAAAA GGCA TAT TGCC TTTTTTATCAAATAT secY 834132 - 832684 - | preprotein translocase subunit SecY TERM 1025 833284 - 833309 + g 77 -4.7 -5.29846 | opp_overlap 833284, overlap 833272 833284 833286 ATTTGAATCAGTTAA TCCTGATCCAG TTTG CTGGATTGGAA TTTTTCTTTCAGCTT rplO 834569 - 834132 - | 50S ribosomal protein L15 TERM 1026 834249 - 834261 + g 70 -4.9 -4.86773 | overlap 834259 AGCTAGTATCTTAAT TAATG ATG CATTA TTTTTAATAATTTTA rpsE 835352 - 834588 - | 30S ribosomal protein S5 TERM 1027 835391 - 835411 + r 71 -8.3 -3.11761 | overlap 835390 835406 ATTTTAATCCATTTT CTCTTGCAG TTT CTGCAAAAG CTTTGATTTTACCAT rplR 835721 - 835371 - | 50S ribosomal protein L18 rplF 836289 - 835747 - | 50S ribosomal protein L6 rpsH 836692 - 836303 - | 30S ribosomal protein S8 rplE 837458 - 836916 - | 50S ribosomal protein L5 rplX 837803 - 837477 - | 50S ribosomal protein L24 MSC_0733 837430 - 837822 + | hypothetical protein rplN 838185 - 837817 - | 50S ribosomal protein L14 rpsQ 838458 - 838201 - | 30S ribosomal protein S17 rpmC 838874 - 838458 - | 50S ribosomal protein L29 rplP 839287 - 838874 - | 50S ribosomal protein L16 rpsC 839991 - 839290 - | 30S ribosomal protein S3 TERM 1028 839552 - 839562 + g 78 -5.4 -5.14563 | ATTCCTTTAGCTCCA GCTT TTA AAGC TTTTTTAATAGCCAA TERM 1029 839684 - 839694 + g 76 -2.6 -5.93252 | opp_overlap 839684 TCAATAACTCTAACA TTAA CAA TTAA TTTTTTATTTTTAAC rplV 840344 - 840009 - | 50S ribosomal protein L22 rpsS 840634 - 840368 - | 30S ribosomal protein S19 rplB 841504 - 840656 - | 50S ribosomal protein L2 rplW 841843 - 841559 - | 50S ribosomal protein L23 TERM 1030 841803 - 841816 + g 73 -3.1 -5.58074 | overlap 841804 CCAGCAAATGATTTT TCAGT TAAT ACTGG TTTTTTTAATACTTC rplD 842469 - 841843 - | 50S ribosomal protein L4 TERM 1031 841967 - 841989 + g 70 -3.5 -5.33405 | CCAGTAATATTATTT GAAGACTTA ACTAC TAATTCTTC TTTTTCTTTAGTAAC rplC 843153 - 842482 - | 50S ribosomal protein L3 rpsJ 843537 - 843229 - | 30S ribosomal protein S10 TERM 1032 843769 - 843750 - R 100 -8 -6.07969 | opp_overlap 843745 843750, overlap 843755 TAAAATCAAAAAAAA TTACATCA AAAT TGATGTAA TTTTAATATTATTTA TERM 1033 843750 - 843769 + r 81 -8 -4.52347 | opp_overlap 843750 843755, overlap 843745 TAAAATCAAAAAAAA TTACATCA AAAT TGATGTAA TTTTAATATTATTTA dhaK1 844787 - 843789 - | glycerone kinase TERM 1034 843991 - 844007 + g 72 -8.7 -2.53164 | overlap 843990 AGTAATTCCATTTCA GGAGTGG CAC CCATTCC ATTAATCATAACTGC TERM 1035 844600 - 844613 + g 72 -8.1 -3.14132 | opp_overlap 844599 844595 CCATATCCAACATAT CCAGC ATGT GCTGG TTCATGACCAGAACC aglA 846302 - 844893 - | Alpha-glucosidase TERM 1036 846496 - 846470 - R 100 -11 -4.93296 | opp_overlap 846469 846468 846472 TTAGTATCATAAAAA GATTGTGGATGA ATT TCATACACAATC GCTTCTTTATAATTA pts 848137 - 846530 - | PTS system, trehalose-specific IIBC component MSC_0750 848642 - 848142 - | hypothetical protein lacI 849127 - 848786 - | LacI family transcription regulator TERM 1037 848976 - 849004 + g 77 -4.7 -5.32565 | opp_overlap 848976 848977 848979, overlap 848977 GAATGAGCTGCAAAA TTAGGTGAAAAAT TAT ATTTTTCAACTAC TTTTTTAATTAGTTC TERM 1038 849003 - 848977 - G 71 -8.2 -3.07259 | opp_overlap 848977 848976, overlap 848976 848979 AATGAGCTGCAAAAT TAGGTGAAAAAT TAT ATTTTTCAACTA CTTTTTTAATTAGTT TERM 1039 848977 - 849003 + g 76 -8.2 -3.77912 | opp_overlap 848976 848977 848979, overlap 848976 AATGAGCTGCAAAAT TAGGTGAAAAAT TAT ATTTTTCAACTA CTTTTTTAATTAGTT MSC_0752 849380 - 849117 - | hypothetical protein TERM 1040 849447 - 849434 - H 70 -2.5 -5.48825 | opp_overlap 849434 TATCATTTAAAAAAA TAATA CTTT TATTA GTTGATATATTACAA MSC_0753 849509 - 849676 + | hypothetical protein TERM 1041 849767 - 849751 - f 79 -3.8 -5.80727 | opp_overlap 849751 AAAAATAATAAAAAA TTAGTT TTGGC AACTAA TGTGTTTGGTGTTGC MSC_0754 849757 - 850401 + | hypothetical protein TERM 1042 850433 - 850450 + T 100 -7.1 -6.23317 | opp_overlap 850432 850433 TAAATATATAACAAT GTAAGTT TTAA AACTTAC TTTTTTTATTTTTAT TERM 1043 850485 - 850503 + T 87 -10.4 -3.26717 | opp_overlap 850485, overlap 850488 TGTAAAACAAAAAAA GAAGATCA AAA TGATCTTC TTAAATTATGTAAAT TERM 1044 850503 - 850485 - T 100 -10.4 -6.09196 | opp_overlap 850485 850488 TGTAAAACAAAAAAA GAAGATCA AAA TGATCTTC TTAAATTATGTAAAT TERM 1045 850632 - 850617 - T 93 -9 -4.88293 | opp_overlap 850616 AATTTTAAAAATAAA GAGCAC AGTA GTGCTC GAGTTTTCTAATGGT MSC_0755 851622 - 851074 - | hypothetical protein MSC_0756 852077 - 851817 - | hypothetical protein TERM 1046 851925 - 851909 - G 70 -5.1 -4.81734 | opp_overlap 851909 AAACATCACCAAAAA CTCTGAT CTT AACAGAG TTCTTATTAGCATTA TERM 1047 852138 - 852124 - R 84 -5 -5.74086 | opp_overlap 852124 852119 AAATTAAATAAAAAA TAAGCA AGT CGCTTA TTTTGTCTAATTATT MSC_0757 852910 - 852149 - | hypothetical protein folD 853577 - 852900 - | methylenetetrahydrofolate dehydrogenase (NADP+)/ methenyltetrahydrofolate cyclohydrolase MSC_0759 855394 - 853775 - | Sodium transport protein TERM 1048 854502 - 854529 + g 73 -2.9 -5.74086 | opp_overlap 854502 AAATACACTCAGAAA TTAATTTTTGT AAATAA ACTAAAATTAA TTTTTTCTTTAGTTT MSC_0760 855455 - 856180 + | hypothetical protein TERM 1049 856171 - 856219 + T 100 -12.1 -4.30043 | opp_overlap 856178 856181 856189, overlap 856178 856181 856189 TCCAAACCTTTTAAC TGAAGAATAATAAAAAAATGGGC AGT GCCCATTTTTTTATTATTATAAA TTCTTTTCAATTTCT TERM 1050 856212 - 856178 - T 100 -19 -3.73068 | opp_overlap 856171 856178 856181 856189, overlap 856181 856189 CTTTTAACTGAAGAA TAATAAAAAAATGGGC AGT GCCCATTTTTTTATTA TTATAAATTCTTTTC TERM 1051 856178 - 856212 + T 100 -19 -3.51545 | opp_overlap 856178 856181 856189, overlap 856171 856181 856189 CTTTTAACTGAAGAA TAATAAAAAAATGGGC AGT GCCCATTTTTTTATTA TTATAAATTCTTTTC TERM 1052 856181 - 856209 + T 100 -16.3 -3.86481 | opp_overlap 856178 856181 856189, overlap 856178 856171 856189 TTAACTGAAGAATAA TAAAAAAATGGGC AGT GCCCATTTTTTTA TTATTATAAATTCTT TERM 1053 856209 - 856181 - T 100 -16.3 -3.99494 | opp_overlap 856181 856178 856171 856189, overlap 856178 856189 TTAACTGAAGAATAA TAAAAAAATGGGC AGT GCCCATTTTTTTA TTATTATAAATTCTT TERM 1054 856201 - 856189 - T 100 -9.1 -5.97979 | opp_overlap 856181 856178 856171 856189, overlap 856181 856178 AGAATAATAAAAAAA TGGGC AGT GCCCA TTTTTTTATTATTAT TERM 1055 856189 - 856201 + T 100 -9.1 -5.97979 | opp_overlap 856189 856181 856178, overlap 856181 856178 856171 AGAATAATAAAAAAA TGGGC AGT GCCCA TTTTTTTATTATTAT gatB 857685 - 856213 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 859111 - 857654 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1056 857836 - 857860 + gr 79 -3.7 -5.67283 | opp_overlap 857833, overlap 857838 CTAAAACTAAAATAT TTTCAATAAAA TCT TTTTCTTGAGA TTTTTTATTTGGATT gatC 859407 - 859111 - | glutamyl-tRNA (Gln) amidotransferase, subunit C TERM 1057 859257 - 859247 - G 73 -5.4 -4.87786 | opp_overlap 859247, overlap 859248 TTAACTGTATAAAAA GTTG GTT CAAC ATCTGTTGTATCAAT ligA 861415 - 859409 - | DNA ligase MSC_0765 863440 - 861419 - | hypothetical protein TERM 1058 863215 - 863199 - G 71 -7.3 -3.88985 | overlap 863188 AAAACTGTTGATAAA GCTAAAG CTC CTTCAGC AGTTCCACCAATTAT rluC 864351 - 863443 - | RNA pseudouridylate synthase MSC_0767 865322 - 864354 - | hypothetical protein TERM 1059 864840 - 864858 + g 74 -4.7 -5.22039 | TTTTTTATTTTCTTT TAAAGTT TGTTT AACTTTA TTTTTTAAATTTGAG TERM 1060 865033 - 865022 - G 78 -4.4 -5.48303 | ATAACTCTAAAAAAA TTGG AAAT CCAA ATAATATACCAACCC TERM 1061 865352 - 865366 + r 73 -5.7 -4.90013 | opp_overlap 865329 865347 865352 TTTTAATAAAGAAAA CAACC TAAAT GGTTG TTTTTAATTAAATTA TERM 1062 865366 - 865352 - R 78 -5.7 -5.09762 | opp_overlap 865352, overlap 865329 865347 TTTTAATAAAGAAAA CAACC TAAAT GGTTG TTTTTAATTAAATTA ptsH 865648 - 865379 - | phosphocarrier protein HPr pcrA 867881 - 865713 - | ATP-dependent DNA helicase TERM 1063 867432 - 867447 + g 70 -4.8 -4.84017 | TTCTTTTCATTCTTT GATTTT ATAT AAAATC TTTTTATCAAAAGTT TERM 1064 867447 - 867460 + g 79 -3.9 -5.77632 | opp_overlap 867447 GATTTTATATAAAAT CTTTT TATC AAAAG TTTTTTTATCATTTT MSC_0770 868653 - 867898 - | hypothetical protein cps 869609 - 868653 - | glycosyltransferase TERM 1065 869183 - 869221 + g 70 -7 -3.79251 | opp_overlap 869185, overlap 869184 CATAATCTTTATTTA AATCATATAATTTATTAG CTT CTAATAAGTTATATGAAA TTTGATAATCAACTA TERM 1066 869184 - 869220 + g 82 -10.5 -2.87229 | opp_overlap 869185, overlap 869183 ATAATCTTTATTTAA ATCATATAATTTATTAG CTT CTAATAAGTTATATGAA ATTTGATAATCAACT TERM 1067 869219 - 869185 - G 95 -11.8 -3.65827 | opp_overlap 869184 869183 TAATCTTTATTTAAA TCATATAATTTATTAG CTT CTAATAAGTTATATGA AATTTGATAATCAAC TERM 1068 869694 - 869666 - R 79 -4.8 -5.54079 | opp_overlap 869666 TTAAAAATTAAAAAA TGAAACTTAT TTTGTTGTT ATAAGTTTCA TTTTTAATAGATATT TERM 1069 869666 - 869694 + r 70 -4.8 -4.76644 | opp_overlap 869666 TTAAAAATTAAAAAA TGAAACTTAT TTTGTTGTT ATAAGTTTCA TTTTTAATAGATATT MSC_0772 870215 - 869898 - | hypothetical protein MSC_0773 870754 - 870221 - | hypothetical protein TERM 1070 870837 - 870855 + r 75 -3.8 -5.54403 | overlap 870823 870831 GGTTGATCCCGGGCT GATCAGCT TGT GGTTGGTC TTTTTCTTCTTTTTT TERM 1071 871003 - 871013 + r 73 -2.6 -5.75599 | ACTTACTATTTTTAA TAAA TGT TTTA TTTTTTTCTCCTTTC TERM 1072 871046 - 871063 + r 78 -8.5 -3.85527 | opp_overlap 871046 AAAAAAACAGAAAAA TGCGAAT TTAA ATTCGCA TTATATTGTGTTGTA TERM 1073 871063 - 871046 - R 100 -8.5 -5.44837 | opp_overlap 871046 AAAAAAACAGAAAAA TGCGAAT TTAA ATTCGCA TTATATTGTGTTGTA msrA 872017 - 871088 - | peptide methionine sulfoxide reductase TERM 1074 871503 - 871519 + g 71 -6.7 -4.18443 | AAACTTAATTCTTTT CTTATTA ACT TAATAAG TTCTTGTTCTTTATC TERM 1075 872118 - 872101 - R 100 -7.1 -6.04419 | opp_overlap 872101 AAAATAATAAAAAAA CAAATCT TAAT AGATTTG TTTTTTATGATTATT TERM 1076 872101 - 872118 + r 90 -7.1 -5.4111 | opp_overlap 872101 AAAATAATAAAAAAA CAAATCT TAAT AGATTTG TTTTTTATGATTATT lpp 874315 - 872132 - | prolipoprotein TERM 1077 872203 - 872215 + g 72 -6.3 -4.42765 | TATACATTAGATTTG GGTTA GCA TAACC TTTAGTTTTTTCAAA TERM 1078 874417 - 874399 - R 72 -4.7 -4.9645 | overlap 874407 ATTATAAGAATAAAA TTAGTAA ATTAA TTACTAA CTAAATTTTAATACT TERM 1079 874554 - 874539 - R 100 -7.6 -6.14618 | opp_overlap 874534 874539 TATAAAACAAAAAAA CAGATC ATAA GATCTG TTTTAGTTCTATGTT TERM 1080 874539 - 874554 + r 83 -7.6 -4.55544 | opp_overlap 874539, overlap 874534 TATAAAACAAAAAAA CAGATC ATAA GATCTG TTTTAGTTCTATGTT MSC_0776 876911 - 874563 - | prolipoprotein TERM 1081 874637 - 874654 + g 70 -4.2 -5.0538 | TATACACTAAATTTG GATTAG CATAAC CTAATC TTTTTTCAAATAAAC TERM 1082 875470 - 875484 + g 71 -5.8 -4.72631 | CTAAAAAAGTCTTTA TTTACA GAT TGTAAA TTTTCTTGAGTTAAT TERM 1083 876751 - 876771 + g 74 -4.8 -5.26119 | opp_overlap 876741, overlap 876752 AAAAACTGATTAATT TCAGATAA TATGT TTATCTGG TTTTCTTTTTCAAAA MSC_0777 877822 - 876920 - | hypothetical protein TERM 1084 877794 - 877784 - G 78 -5.4 -5.14563 | opp_overlap 877784 TGTTGGATTAAAAAA CGTT CTT AACG CTTCTCCTGGTGTAT TERM 1085 877939 - 877920 - R 100 -10.8 -5.60556 | opp_overlap 877920 877924 AATAGAAAATAAAAA GCAATAGC TGTT GCTATTGC TATACATATTAAAAA MSC_0778 879801 - 878257 - | hypothetical protein TERM 1086 879009 - 879031 + g 72 -7.9 -3.55592 | overlap 879007 TATTTTTTCAATCTC CATTTGAAA CTAAA TTTCAAATG TATTTATCAAATTGT TERM 1087 879107 - 879142 + g 71 -6.5 -4.10161 | gap 2, opp_overlap 879107 879116, overlap 879116 ATATTTTTAATTAAA TCTAAATCATCTAAAGG TACA CCTTTAGA-G-TTTAGA TTTTCAAAAATAGTC TERM 1088 879116 - 879135 + g 78 -9.4 -2.95113 | opp_overlap 879116 879107, overlap 879107 ATTAAATCTAAATCA TCTAAAGG TACA CCTTTAGA GTTTAGATTTTCAAA TERM 1089 879135 - 879116 - G 78 -9.4 -3.00419 | opp_overlap 879107 879116, overlap 879107 ATTAAATCTAAATCA TCTAAAGG TACA CCTTTAGA GTTTAGATTTTCAAA MSC_0779 880382 - 879804 - | hypothetical protein MSC_0780 881239 - 880385 - | putative C5 methylase (MAV1virus-like) tnp 882387 - 881302 - | transposase ISMmy1D TERM 1090 881447 - 881464 + g 73 -3.5 -5.55769 | gap 1, overlap 881450 CTATTGTCAAGAACG CCA-CTAT TTA ATAGGTGG TTTTTTATTCTGCAA TERM 1091 881866 - 881894 + g 73 -5.5 -4.8543 | opp_overlap 881870 881875, overlap 881864 ATTAAATCCAGATTT TAAATTAAACTTT TTA AAAGTATGATTTA TTTTTATAGGGATTA TERM 1092 882834 - 882816 - R 100 -7.5 -5.49809 | opp_overlap 882815 882818 882833 GAAATTGGAAAAAAA TAGAGCT TTTTT AGCTCTA AATTTAAGAAAATTT TERM 1093 883098 - 883069 - R 72 -3.7 -5.38326 | gap 1, opp_overlap 883062 883096 CTAAGCAAATAAAAA TTCCCTT-GATTAT TTA AAAACCTAAGGGAA TTTTTAAATTCTATA lpp 885352 - 883460 - | prolipoprotein TERM 1094 883651 - 883668 + g 70 -4.2 -4.98061 | overlap 883647 TTGGAGTAAGTGTTG GAACAA CTTGAA TTGTTC TTTTATTTCCTCTAT MSC_0783 885522 - 885364 - | hypothetical protein MSC_0784 886262 - 885639 - | hypothetical protein TERM 1095 886105 - 886127 + g 71 -7.2 -3.93769 | GCTATAGTATAACCT GATGATAAAA AGA TTTTATTATC TTGCTTTTTTAAAAT TERM 1096 886240 - 886230 - G 75 -5.4 -5.09225 | opp_overlap 886218 AGTTGAGTTAAAAAA CGTT CTT AACG CATTTCCTGGCTGAT TERM 1097 886282 - 886316 + H 75 -3.8 -5.60993 | gap 2, overlap 886283 886312 886313 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 1098 886283 - 886314 + H 86 -8.9 -4.45201 | gap 1, overlap 886282 886312 886313 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 1099 886822 - 886794 - g 91 -8.3 -5.04356 | opp_overlap 886802, overlap 886784 886799 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1100 886817 - 886799 - g 79 -9 -3.48824 | opp_overlap 886802, overlap 886794 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 886378 - 888051 + | IS1634AM transposase TERM 1101 888080 - 888070 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1102 888213 - 888203 - T 75 -5.4 -5.09225 | opp_overlap 888191 AGTTGAGTTAAAAAA CGTT CTT AACG CATTTCCTGGCTGAT TERM 1103 888299 - 888278 - T 78 -4.6 -5.56264 | opp_overlap 888278 TTTAAACATAAAAAA TTTTATTG AAACAA CAATAAAA TTTTTTCTAGATTAT TERM 1104 888278 - 888299 + T 76 -4.6 -5.3236 | opp_overlap 888278 TTTAAACATAAAAAA TTTTATTG AAACAA CAATAAAA TTTTTTCTAGATTAT TERM 1105 889780 - 889736 - T 93 -7.3 -5.64321 | opp_overlap 889737 889740 889742, overlap 889737 889742 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 1106 889779 - 889737 - T 95 -10.8 -3.94933 | opp_overlap 889737 889740 889742, overlap 889736 889742 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 1107 889774 - 889742 - T 100 -10.7 -4.88326 | opp_overlap 889740 889737 889742, overlap 889737 889736 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA phnB 891568 - 889736 - | alkylphosphonate ABC transporter permease TERM 1108 890667 - 890686 + gT 74 -5 -5.09895 | overlap 890669 TGTTTATAAACTTTA GATCTAGC CTCA GCTAGATA TTTTTTAAATAAATA TERM 1109 890669 - 890684 + gT 77 -7.6 -4.17608 | overlap 890667 TTTATAAACTTTAGA TCTAGC CTCA GCTAGA TATTTTTTAAATAAA TERM 1110 891359 - 891375 + gT 75 -6.7 -4.43309 | TAGTTTTTTAGCTAC TTGATAA AAA TTATCAA TTTTAATTAGACTTG phnC 892281 - 891532 - | alkylphosphonate ABC transporter, ATP-binding component phnD 893764 - 892292 - | alkylphosphonate ABC transporter substrate-binding protein TERM 1111 893813 - 893795 - RH 93 -9 -4.85195 | overlap 893800 AAAATAAGGGAAAAA TAAAAGGT TAT ACCTTTTA AGGGCATAACCTGTA TERM 1112 893824 - 893800 - RH 100 -7.9 -5.29885 | overlap 893795 AAGGGAAAAATAAAA GGTTATACCTT TTA AGGGCATAACC TGTAAAAAATCTTTA TERM 1113 893986 - 893976 - RH 76 -2.6 -5.85011 | opp_overlap 893976 TAAAAACTAAAAAAA TTAA TGA TTAA TTACTTATCTATTCT MSC_0792 894130 - 893987 - | hypothetical protein MSC_0791 893979 - 894245 + | hypothetical protein MSC_0793 894849 - 894325 - | hypothetical protein patB 894981 - 896171 + | aminotransferase (PLP-dependent) MSC_0795 896181 - 896582 + | translation initiation inhibitor TERM 1114 896620 - 896583 - T 86 -9.4 -4.14627 | opp_overlap 896583, overlap 896591 TGTTTAGATAAATAA TAAAAAAATGCAGATC ATTATA GGTCTGCATTTTCTTA TTTTTTAGATTTAAT TERM 1115 896583 - 896620 + T 100 -9.4 -5.22943 | opp_overlap 896583 896591 TGTTTAGATAAATAA TAAAAAAATGCAGATC ATTATA GGTCTGCATTTTCTTA TTTTTTAGATTTAAT TERM 1116 896612 - 896591 - T 89 -4.4 -6.01369 | opp_overlap 896583, overlap 896583 TAAATAATAAAAAAA TGCAGATC ATTATA GGTCTGCA TTTTCTTATTTTTTA tnp 898147 - 896702 - | transposase ISMmy1G TERM 1117 896847 - 896864 + g 73 -3.5 -5.55769 | gap 1, overlap 896850 CTATTGTCAAGAACG CCA-CTAT TTA ATAGGTGG TTTTTTATTCTGCAA TERM 1118 897266 - 897294 + g 73 -5.5 -4.8543 | opp_overlap 897270 897275, overlap 897264 ATTAAATCCAGATTT TAAATTAAACTTT TTA AAAGTATGATTTA TTTTTATAGGGATTA TERM 1119 898268 - 898250 - R 100 -7.5 -5.49809 | opp_overlap 898249 898252 898267 GAAATTGGAAAAAAA TAGAGCT TTTTT AGCTCTA AATTTAAGAAAATTT TERM 1120 898513 - 898523 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 900215 - 898542 - | IS1634AU transposase TERM 1121 899771 - 899799 + g 91 -8.3 -5.04356 | opp_overlap 899779, overlap 899776 899797 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1122 899776 - 899794 + g 79 -9 -3.48824 | opp_overlap 899779, overlap 899771 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1123 900311 - 900277 - R 75 -3.8 -5.60993 | gap 2, overlap 900257 900256 900279 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1124 900310 - 900279 - R 86 -8.9 -4.45201 | gap 1, overlap 900257 900256 900277 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG lpp 902844 - 900805 - | prolipoprotein TERM 1125 900996 - 901013 + g 70 -4.2 -4.98061 | overlap 900992 TTGGAGTAAGTGTTG GAACAA CTTGAA TTGTTC TTTTATTTCCTCTAT MSC_0799 903014 - 902856 - | hypothetical protein MSC_0800 903754 - 903131 - | hypothetical protein TERM 1126 903597 - 903619 + g 71 -7.2 -3.93769 | GCTATAGTATAACCT GATGATAAAA AGA TTTTATTATC TTGCTTTTTTAAAAT TERM 1127 903732 - 903722 - G 75 -5.4 -5.09225 | opp_overlap 903710 AGTTGAGTTAAAAAA CGTT CTT AACG CATTTCCTGGCTGAT TERM 1128 903797 - 903818 + r 76 -4.6 -5.3236 | opp_overlap 903797 TTTAAACATAAAAAA TTTTATTG AAACAA CAATAAAA TTTTTTCTAGATTAT TERM 1129 903818 - 903797 - R 78 -4.6 -5.56264 | opp_overlap 903797 TTTAAACATAAAAAA TTTTATTG AAACAA CAATAAAA TTTTTTCTAGATTAT abc 905600 - 904929 - | ABC transporter, permease component TERM 1130 905391 - 905407 + g 75 -6.7 -4.43309 | TAGTTTTTTAGCTAC TTGATAA AAA TTATCAA TTTTAATTAGACTTG TERM 1131 905683 - 905693 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 907385 - 905712 - | IS1634AY transposase TERM 1132 906941 - 906969 + g 91 -8.3 -5.04356 | opp_overlap 906949, overlap 906946 906967 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1133 906946 - 906964 + g 79 -9 -3.48824 | opp_overlap 906949, overlap 906941 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1134 907479 - 907448 - R 77 -7.5 -4.13561 | gap 1, overlap 907427 907426 907446 TTTTTGTAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTCA-CGACTA AGTGGGAAACGTAGG phnC 908258 - 907509 - | alkylphosphonate ABC transporter, ATP-binding component abc 909702 - 908269 - | ABC transporter substrate-binding protein TERM 1135 909751 - 909733 - R 93 -9 -4.85195 | overlap 909738 AAAATAAGGGAAAAA TAAAAGGT TAT ACCTTTTA AGGGCATAACCTGTA TERM 1136 909762 - 909738 - R 100 -7.9 -5.29885 | overlap 909733 AAGGGAAAAATAAAA GGTTATACCTT TTA AGGGCATAACC TGTAAAAAATCTTTA TERM 1137 909924 - 909914 - R 76 -2.6 -5.85011 | opp_overlap 909914 TAAAAACTAAAAAAA TTAA TGA TTAA TTACTTATCTATTCT had 910788 - 909925 - | HAD superfamily hydrolase patB 910920 - 912110 + | aminotransferase (PLP-dependent) MSC_0807 912120 - 912521 + | translation initiation inhibitor TERM 1138 912559 - 912522 - T 86 -9.4 -4.14627 | opp_overlap 912522, overlap 912530 TGTTTAGATAAATAA TAAAAAAATGCAGATC ATTATA GGTCTGCATTTTCTTA TTTTTTAGATTTAAT TERM 1139 912522 - 912559 + T 100 -9.4 -5.22943 | opp_overlap 912522 912530 TGTTTAGATAAATAA TAAAAAAATGCAGATC ATTATA GGTCTGCATTTTCTTA TTTTTTAGATTTAAT TERM 1140 912551 - 912530 - T 89 -4.4 -6.01369 | opp_overlap 912522, overlap 912522 TAAATAATAAAAAAA TGCAGATC ATTATA GGTCTGCA TTTTCTTATTTTTTA tnp 914053 - 912641 - | transposase ISMmy1C TERM 1141 912786 - 912803 + g 73 -3.5 -5.55769 | gap 1, overlap 912789 CTATTGTCAAGAACG CCA-CTAT TTA ATAGGTGG TTTTTTATTCTGCAA TERM 1142 913205 - 913233 + g 73 -5.5 -4.8543 | opp_overlap 913209 913214, overlap 913203 ATTAAATCCAGATTT TAAATTAAACTTT TTA AAAGTATGATTTA TTTTTATAGGGATTA TERM 1143 914175 - 914156 - R 88 -6.5 -5.49809 | opp_overlap 914155 914158 914174 GAAATTGGAAAAAAA TAGAGCT TTTTTT AGCTCTA AATTTAAGAAAATTT MSC_0809 915571 - 914693 - | putative variable surface protein TERM 1144 915781 - 915752 - R 73 -3 -5.72254 | gap 1, opp_overlap 915752 TTAAATAATAAAAAA TGCAGA-TTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT TERM 1145 915752 - 915781 + r 79 -5.2 -5.54403 | gap 1, opp_overlap 915752 TTAAATAATAAAAAA TGCAG-ATTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT MSC_0810 917311 - 915788 - | putative variable surface protein TERM 1146 916963 - 916982 + g 77 -5.1 -5.4251 | opp_overlap 916963 TTGTATTATAAAATG CATAACT CATATC AGTTATG TTTTTTGTATCTCAA TERM 1147 917509 - 917543 + r 70 -3.8 -5.24129 | gap 2, overlap 917510 917539 917540 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 1148 917510 - 917541 + r 84 -8.9 -4.25873 | gap 1, overlap 917509 917539 917540 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 1149 918048 - 918020 - R 91 -8.3 -5.04356 | opp_overlap 918028, overlap 918010 918025 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1150 918043 - 918025 - R 79 -9 -3.48824 | opp_overlap 918028, overlap 918020 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 1151 919304 - 919294 - R 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1152 919370 - 919399 + r 79 -5.2 -5.54403 | gap 1, opp_overlap 919370 AAACGTAGGAAAAAA TGCAG-ATTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT MSC_0812 920845 - 919406 - | putative variable surface protein TERM 1153 921011 - 921040 + r 79 -5.2 -5.54403 | gap 1, opp_overlap 921011 TTAAACAATAAAAAA TGCAG-ATTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT TERM 1154 921040 - 921011 - R 73 -3 -5.72254 | gap 1, opp_overlap 921011 TTAAACAATAAAAAA TGCAGA-TTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT MSC_0813 922570 - 921047 - | putative variable surface protein TERM 1155 922222 - 922241 + g 77 -5.1 -5.4251 | opp_overlap 922222 TTGTATTATAAAATG CATAACT CATATC AGTTATG TTTTTTGTATCTCAA TERM 1156 922768 - 922802 + H 70 -3.8 -5.24129 | gap 2, overlap 922769 922798 922799 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 1157 922769 - 922800 + H 84 -8.9 -4.25873 | gap 1, overlap 922768 922798 922799 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 1158 923307 - 923279 - g 91 -8.3 -5.04356 | opp_overlap 923287, overlap 923269 923284 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1159 923302 - 923284 - g 79 -9 -3.48824 | opp_overlap 923287, overlap 923279 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 922863 - 924536 + | IS1634CHBZ transposase TERM 1160 924565 - 924555 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1161 924631 - 924660 + T 79 -5.2 -5.54403 | gap 1, opp_overlap 924631 AAACGTAGGAAAAAA TGCAG-ATTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT MSC_0815 926106 - 924667 - | putative variable surface protein TERM 1162 926301 - 926272 - R 73 -3 -5.72254 | gap 1, opp_overlap 926272 TTAAACAATAAAAAA TGCAGA-TTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT TERM 1163 926272 - 926301 + r 79 -5.2 -5.54403 | gap 1, opp_overlap 926272 TTAAACAATAAAAAA TGCAG-ATTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT MSC_0816 927748 - 926531 - | putative variable surface protein TERM 1164 927947 - 927918 - R 73 -3 -5.72254 | gap 1, opp_overlap 927918 TTAAACAATAAAAAA TGCAGA-TTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT TERM 1165 927918 - 927947 + r 79 -5.2 -5.54403 | gap 1, opp_overlap 927918 TTAAACAATAAAAAA TGCAG-ATTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT MSC_0817 929394 - 929170 - | putative variable surface protein TERM 1166 929589 - 929560 - R 73 -3 -5.72254 | gap 1, opp_overlap 929560 TTAAACAATAAAAAA TGCAGA-TTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT TERM 1167 929560 - 929589 + r 79 -5.2 -5.54403 | gap 1, opp_overlap 929560 TTAAACAATAAAAAA TGCAG-ATTATCT TAATT AGATAGTTCTGCA TTTTTCTTATTTTTT MSC_0818 931038 - 929596 - | putative variable surface protein MSC_0819 931180 - 931434 + | hypothetical protein MSC_0820 931631 - 932329 + | hypothetical protein TERM 1168 932368 - 932331 - f 79 -8.9 -3.54638 | gap 1, opp_overlap 932331, overlap 932336 ACAATGTGTTTTAAA CTAAATTAAAGATTATAA TAT TTATA-TCTTCAATTTAG TTTTTTTATAGTTTA TERM 1169 932331 - 932368 + F 90 -6.7 -5.75599 | gap 1, opp_overlap 932331 932336 ACAATGTGTTTTAAA CTAAATTAAAGATTATAA TAT TTATA-TCTTCAATTTAG TTTTTTTATAGTTTA TERM 1170 932642 - 932614 - f 73 -5.5 -4.7878 | CATTTAGAAAATAAA TTGTTATTATCTC TAA AACATAATAACAA GTATTCGGGAAGTGG TERM 1171 932947 - 932931 - f 72 -8.7 -2.62396 | opp_overlap 932926 CAGTTGGTTAGAGCA TCCGGCT CAT AACCGGA CGGTCATTGGTTCAA TERM 1172 933075 - 933065 - f 71 -6.8 -4.07885 | overlap 933052 GATCGGTCTTGAAAA CCGA GAG TCGG GGAAACCCGAGCGGG TERM 1173 933412 - 933397 - f 73 -7.6 -3.79689 | opp_overlap 933397 ACACAAAAATTATAA GTAGTC ATAA GACTAC TTTTTTTATTTTAAA TERM 1174 933397 - 933412 + F 100 -7.6 -6.09196 | opp_overlap 933397 ACACAAAAATTATAA GTAGTC ATAA GACTAC TTTTTTTATTTTAAA TERM 1175 933584 - 933560 - g 100 -11.7 -5.09521 | opp_overlap 933564 TGAACAAATCAAAAA TAAACCTAATA GTG TATTAGGTTTA GCAACTGGTTCAACA TERM 1176 933564 - 933580 + G 75 -8.1 -3.56568 | opp_overlap 933560 CAAATCAAAAATAAA CCTAATA GTG TATTAGG TTTAGCAACTGGTTC TERM 1177 933724 - 933707 - g 75 -5.7 -5.08178 | opp_overlap 933704 933707 AGATATAGATAAAAA TAATAAG CAAT CTTATTA TTATTTTATGAAAGA nagB 933483 - 934217 + | glucosamine-6-phosphate deaminase TERM 1178 934209 - 934223 + F 100 -7.2 -6.01187 | opp_overlap 934209 TTAACTAATTTAAAA GCTAAT TAG ATTAGC TTTTTTTATTTGCTT TERM 1179 934223 - 934209 - f 75 -7.2 -4.32201 | opp_overlap 934209 TTAACTAATTTAAAA GCTAAT TAG ATTAGC TTTTTTTATTTGCTT TERM 1180 934271 - 934305 + F 75 -3.8 -5.60993 | gap 2, overlap 934272 934301 934302 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 1181 934272 - 934303 + F 86 -8.9 -4.45201 | gap 1, overlap 934271 934301 934302 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 1182 934811 - 934783 - g 91 -8.3 -5.04356 | opp_overlap 934791, overlap 934773 934788 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1183 934806 - 934788 - g 79 -9 -3.48824 | opp_overlap 934791, overlap 934783 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 934367 - 936040 + | IS1634CI transposase TERM 1184 936069 - 936059 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1185 936771 - 936751 - g 71 -5.4 -4.62069 | TTGGTACTGGAAAAA CAGCAACA AGTAG TGATGCTG AAGAAGTATGTAAAC tpi 936231 - 936977 + | triosephosphate isomerase MSC_0824 936970 - 937806 + | HAD family hydrolase gpm 937809 - 939404 + | phosphoglyceromutase TERM 1186 939418 - 939438 + F 83 -4 -5.94743 | opp_overlap 939419, overlap 939419 AAAATCTAAAAATAA TTAGCACT ATCAA GGTGCTAG TTTTTATTTTTTTTA TERM 1187 939743 - 939724 - g 80 -9.4 -3.16564 | overlap 939731 TTTGGAGTTCATGAA CTAGCAAT CTCT ATTGCTAG AAAATATAATTGAGA MSC_0826 939502 - 940110 + | hypothetical protein MSC_0827 940807 - 941103 + | hypothetical protein deoC 941836 - 941246 - | deoxyribose-phosphate aldolase manB 943524 - 941848 - | phosphoglucomutase or phosphomannomutase deoA 943686 - 944999 + | thymidine phosphorylase TERM 1188 945014 - 945037 + T 100 -9.8 -5.63103 | opp_overlap 945010 945014 945033 945035, overlap 945035 ATGAATAATAATTAA TCCTATTTTA GTTG TAAAATAGGA TTTTTTTAATTAAAA TERM 1189 945037 - 945014 - T 89 -9.8 -3.62857 | opp_overlap 945014 945035, overlap 945010 945033 945035 ATGAATAATAATTAA TCCTATTTTA GTTG TAAAATAGGA TTTTTTTAATTAAAA TERM 1190 945057 - 945035 - T 72 -7.9 -3.65542 | opp_overlap 945014 945035 945055, overlap 945014 945010 945033 945055 TTTAGTTGTAAAATA GGATTTTTT TAATT AAAAAATCC TCTATAAAGAGGATA TERM 1191 945070 - 945055 - T 93 -7.6 -5.26875 | opp_overlap 945035 945055, overlap 945035 945033 TTTTTAATTAAAAAA TCCTCT ATAA AGAGGA TAATTTTAAACTTGA frvB 947112 - 945076 - | PTS system, fructose-specific IIBC component TERM 1192 946243 - 946257 + g 78 -4.4 -5.47399 | overlap 946252 GCCTAATAAATTACC TTTAAA GTC TTTAAA TTTTTTTAAACTTAA fruB 948050 - 947115 - | 1-phosphofructokinase fruR 948748 - 948050 - | transcription repressor of fructose operon MSC_0834 948900 - 949880 + | hypothetical protein TERM 1193 949977 - 949961 - f 73 -5.3 -4.79667 | overlap 949969 AAAAGTGATTAAAAA TTTAAAA ATA TTTTAAA AAAATAACTAAAACT TERM 1194 949983 - 949969 - f 70 -4.4 -4.92239 | overlap 949961 TTAAAAATTTAAAAA TATTTT AAA AAAATA ACTAAAACTAGTAAA TERM 1195 950004 - 949991 - f 71 -5.3 -4.72772 | opp_overlap 949991, overlap 949986 949985 AAAAAATAACTAAAA CTAGT AAAA ACTAG TTTAAAACTTTTATT pnp 950083 - 950736 + | purine nucleoside phosphorylase TERM 1196 950807 - 950847 + T 75 -4 -5.59534 | opp_overlap 950807 ATCTTTAATATTTAA TTGCTGTTTTAGTTCATC TATTT GTTGTTCTAAATCAGCAA TTTTTTCTTCTAATT pldB 952207 - 951302 - | lysophospholipase TERM 1197 951763 - 951745 - G 70 -7.6 -3.29874 | overlap 951744 TTAAAAATAAAGAAG TTAGTTTT GTT AAAACTAA AGCTGAAAGTAAAGT TERM 1198 952244 - 952271 + H 71 -5.6 -4.70887 | opp_overlap 952250, overlap 952250 AAATAAATTATGTAA CAAAAACTCATC CTAA GATGAGTTAATG TTTGTTTATTAATAG TERM 1199 952250 - 952265 + H 72 -7.6 -3.58566 | opp_overlap 952250, overlap 952244 ATTATGTAACAAAAA CTCATC CTAA GATGAG TTAATGTTTGTTTAT TERM 1200 952265 - 952250 - H 93 -7.6 -5.11063 | opp_overlap 952250 952244 ATTATGTAACAAAAA CTCATC CTAA GATGAG TTAATGTTTGTTTAT TERM 1201 952706 - 952743 + G 73 -8 -3.73072 | opp_overlap 952700 CATTTAAAGGTTTAA GTCAAATACATTCTTA TATTTT TAAAGATGTATTTGAC TTTAATGGACAAATT TERM 1202 952975 - 952960 - g 87 -6.2 -5.63374 | opp_overlap 952960 TTAATATTAAAAAAA CAACTA AATG TAGTTG TTAATTGAACTAATA fic 952588 - 953160 + | cell filamentation protein Fic-related protein TERM 1203 953382 - 953398 + T 100 -8.1 -5.80951 | ATGAAAAGATCTCAA TGTACTT TTA AAGTACA TTTTTTATTTTGAAT TERM 1204 953510 - 953481 - T 77 -7.5 -4.19371 | gap 1, opp_overlap 953486 953488 953509, overlap 953470 953488 CAAATTTTTAATAAA TAAAAA-AGAGATT TAA AATCTCTCTTTTTA ATTACATTATCTTTA TERM 1205 953502 - 953488 - T 93 -7.2 -5.80003 | opp_overlap 953486 953488, overlap 953481 TTAATAAATAAAAAA GAGATT TAA AATCTC TCTTTTTAATTACAT TERM 1206 953488 - 953502 + T 73 -7.2 -4.06004 | opp_overlap 953488 953481, overlap 953486 TTAATAAATAAAAAA GAGATT TAA AATCTC TCTTTTTAATTACAT MSC_0839 954630 - 953536 - | hypothetical protein bgl 956059 - 954623 - | beta-glucosidase TERM 1207 955006 - 955025 + gr 73 -4.4 -5.17744 | GAATTTCTCAACCTC TATAAGGA TTAA TTCTTATA TTTTTATTAGTGTAT TERM 1208 955679 - 955661 - GR 70 -6.2 -4.23781 | opp_overlap 955661 955660 955665, overlap 955665 TGTATCAAAATGAAA TAAATTAA CAA TTAATTTA ATGTTATTTTTTTTA suk 956897 - 956004 - | ROK family sugar kinase frvA 957342 - 956884 - | PTS system, fructose-specific IIA component TERM 1209 959101 - 959057 - g 93 -7.3 -5.64321 | opp_overlap 959058 959061 959063, overlap 959058 959063 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 1210 959100 - 959058 - g 95 -10.8 -3.94933 | opp_overlap 959058 959061 959063, overlap 959057 959063 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 1211 959095 - 959063 - g 100 -10.7 -4.88326 | opp_overlap 959063 959061 959058, overlap 959058 959057 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA tnpB 958259 - 959119 + | IS1296HV transposase protein B MSC_0845 961505 - 959127 - | glycosyl hydrolase family protein frvB 963358 - 961517 - | PTS system, fructose-specific IIBC component TERM 1212 963118 - 963148 + g 74 -8.5 -3.31269 | opp_overlap 963127, overlap 963121 TCTTAACATCAGCTG CAATTATAACAAG ATCAG CTTGTTGTAGTTG TTGATCTGATATAAC lpp 964146 - 963373 - | putative variable prolipoprotein TERM 1213 963454 - 963473 + g 70 -5.2 -4.85433 | AGCATTAAATGATAC TAAATAAA CAAT TTTATTTA TTTTTAAATTTGTAT TERM 1214 964272 - 964313 + r 91 -10.5 -3.61806 | opp_overlap 964272 964282, overlap 964275 964282 AAACTTGTAATAAGA TAATAAAAAAGGTTCTTAA ATAT TTAAGAACCTTATTAATTA TTATCTGGTTGATAT TERM 1215 964313 - 964272 - R 90 -10.5 -3.409 | opp_overlap 964272 964275 964282, overlap 964282 AAACTTGTAATAAGA TAATAAAAAAGGTTCTTAA ATAT TTAAGAACCTTATTAATTA TTATCTGGTTGATAT TERM 1216 964275 - 964310 + r 75 -7.8 -3.93117 | opp_overlap 964272 964282, overlap 964272 964282 CTTGTAATAAGATAA TAAAAAAGGTTCTTAA ATAT TTAAGAACCTTATTAA TTATTATCTGGTTGA TERM 1217 964303 - 964282 - R 100 -10.3 -5.64304 | opp_overlap 964282 964275 964272, overlap 964272 TAAGATAATAAAAAA GGTTCTTAA ATAT TTAAGAACC TTATTAATTATTATC TERM 1218 964282 - 964303 + r 95 -10.3 -3.91564 | opp_overlap 964272 964282, overlap 964275 964272 TAAGATAATAAAAAA GGTTCTTAA ATAT TTAAGAACC TTATTAATTATTATC hpt 964858 - 964307 - | hypoxanthine phosphoribosyltransferase purB 966201 - 964894 - | adenylosuccinate lyase purA 967483 - 966185 - | adenylosuccinate synthetase TERM 1219 967261 - 967274 + g 72 -3.9 -5.37593 | AATTAATTACTGTTC CATTA CCAA TAATG TTTTTTACTTTAGGA tnpA 967678 - 968220 + | IS1296GZ transposase protein A TERM 1220 969070 - 969026 - T 93 -7.3 -5.64321 | opp_overlap 969027 969030 969032, overlap 969027 969032 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 1221 969069 - 969027 - T 95 -10.8 -3.94933 | opp_overlap 969027 969030 969032, overlap 969026 969032 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 1222 969064 - 969032 - T 100 -10.7 -4.88326 | opp_overlap 969030 969027 969032, overlap 969027 969026 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA TERM 1223 969175 - 969150 - T 100 -6.3 -6.32976 | overlap 969122 969121 AAAAAAATAAAAAAA CCAAATACTAA AATT TTAATACTTGG TTAAAAATTTATTAA nrdE 971358 - 969187 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1224 970966 - 970945 - G 77 -6.7 -4.68994 | opp_overlap 970945 970947 ACCATTACCTAAAAA TAGAGCATT CATC AATACTCTA TCTGTATAAGTTTCT nrdI 971809 - 971336 - | ribonucleotide reductase stimulatory protein nrdF 972837 - 971818 - | ribonucleotide-diphosphate reductase subunit beta TERM 1225 972951 - 972982 + H 80 -2.5 -6.00086 | opp_overlap 972942 ATAGTATTTTAATAG TAAAAAATTAGTT CCATTT AACTAGATTTTTA TTTTTTTTGTGATAT TERM 1226 973407 - 973434 + H 76 -2.8 -5.95539 | opp_overlap 973411, overlap 973411 CAATAAGCATCATTA CAAACACTATGT TATA AAATAGTGTTTA TTTTTTTATTTAAAA TERM 1227 973411 - 973430 + H 72 -3.6 -5.36181 | opp_overlap 973411, overlap 973407 AAGCATCATTACAAA CACTATGT TATA AAATAGTG TTTATTTTTTTATTT TERM 1228 973608 - 973587 - g 79 -3.9 -5.71983 | opp_overlap 973587 CCAATTAGAAAAAAA TAATAAAAT TACT ATTTCATTA GAAAATAATATTTAC TERM 1229 973684 - 973661 - g 80 -9.8 -2.90494 | opp_overlap 973665 973681, overlap 973660 973665 AGGGAACTATTAAAT TAAATCCAAA AGGT TTTGGATTTA TAAATGATATTAATA TERM 1230 974032 - 974012 - g 77 -7.1 -4.39407 | opp_overlap 974012 GTAAAGAACGTAAAA TTTTTATAA GAC TTATAAAAA TTATTGGAAACAGTA TERM 1231 974767 - 974753 - g 82 -5.7 -5.52079 | ATATTAAAACAAAAA CAGCT GATCA AGCTG AAAAATTAATTGAAC rnr 973459 - 975573 + | ribonuclease R smpB 975583 - 976029 + | SsrA-binding protein MSC_0858 976029 - 976511 + | hypothetical protein TERM 1232 976603 - 976637 + F 75 -3.8 -5.60993 | gap 2, overlap 976604 976633 976634 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 1233 976604 - 976635 + F 86 -8.9 -4.45201 | gap 1, overlap 976603 976633 976634 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 1234 977143 - 977115 - g 91 -8.3 -5.04356 | opp_overlap 977123, overlap 977105 977120 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1235 977138 - 977120 - g 79 -9 -3.48824 | opp_overlap 977123, overlap 977115 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 976699 - 978372 + | IS1634AL transposase TERM 1236 978401 - 978391 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1237 978658 - 978632 - f 88 -5.2 -5.89659 | ACAAAAAAATAAAAA CCGTTATAGTTT TGA AAACCAAAACAG AGAATCAAAAAATGC ptsG 978817 - 980847 + | PTS system, glucose-specific IIBC component TERM 1238 981033 - 981054 + F 87 -6 -5.67967 | opp_overlap 981033 981032 981035 AATTTTTAATTAAAG TACTCAAT TTATCT ATTGAGTA TTTTTTTATAGTGAT TERM 1239 981221 - 981205 - g 80 -3.1 -5.88197 | opp_overlap 981213 CTAAAGATAAAAAAA TTATTTA TTC TAAACAA TTTGGATATAATGAC TERM 1240 981991 - 981968 - g 72 -4 -5.31456 | overlap 981961 CCAACTTACAAAAAA CAATTTAAAA CAGT TTTTTAATTG AAATTTAAATAAAGA MSC_0861 981111 - 982085 + | hypothetical protein TERM 1241 982267 - 982257 - T 73 -2.6 -5.69023 | AAAAGATGAAAAAAA TATT AGG AATA GATCTTGGTGGGACT TERM 1242 982393 - 982403 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 984095 - 982422 - | IS1634AX transposase TERM 1243 983651 - 983679 + g 91 -8.3 -5.04356 | opp_overlap 983659, overlap 983656 983677 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1244 983656 - 983674 + g 79 -9 -3.48824 | opp_overlap 983659, overlap 983651 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1245 984191 - 984157 - H 75 -3.8 -5.60993 | gap 2, overlap 984137 984136 984159 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1246 984190 - 984159 - H 86 -8.9 -4.45201 | gap 1, overlap 984137 984136 984157 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG glk 984307 - 985092 + | glucokinase TERM 1247 985129 - 985105 - T 100 -10.9 -5.64304 | opp_overlap 985105 TAATATAATAAAAAA GTTCAAATGCT AAT AACATTTGAAC TTATAGAGTAGTTAT TERM 1248 985105 - 985129 + T 77 -8.7 -3.35283 | opp_overlap 985105 TAATATAATAAAAAA GTTCAAATGCT AAT AACATTTGAAC TTATAGAGTAGTTAT TERM 1249 985137 - 985151 + T 100 -7.2 -6.01369 | opp_overlap 985137 ATTTGAACTTATAGA GTAGTT ATT AACTAC TTTTTTTATTATTTA arcC 986092 - 985160 - | carbamate kinase TERM 1250 985987 - 986013 + g 70 -3.1 -5.4477 | overlap 985990 TATCATTACCTTGAA CAATAAAATCT ACTAA AGATTTTGCTG TTTTTTTCACAATTT MSC_0865 986428 - 986105 - | putative membrane arginine transporter MSC_0866 986636 - 986472 - | hypothetical protein MSC_0867 986970 - 986725 - | hypothetical protein TERM 1251 987437 - 987421 - R 71 -5.3 -4.68506 | AATTAATTGTAAAAA TATTTTT AAT AAAAATA AAAAGTTCAAACACA TERM 1252 987442 - 987468 + r 93 -9.6 -4.47328 | opp_overlap 987442 TAATAAAAATAAAAA GTTCAAACACAA ATT TTGTATTTGAAC TTTTGTAGTAAAATT TERM 1253 987468 - 987442 - R 100 -11.8 -5.74684 | opp_overlap 987442 TAATAAAAATAAAAA GTTCAAACACAA ATT TTGTATTTGAAC TTTTGTAGTAAAATT mgtA 990324 - 987496 - | Mg(2+) transport ATPase, P-type TERM 1254 990294 - 990307 + g 71 -5.3 -4.65895 | overlap 990286 TTGTTATTTTTTTAG GAGAA AACT TTCTC TTTTTAAATAAAAAC TERM 1255 990754 - 990719 - g 73 -4.2 -5.25772 | overlap 990722 990725 AAATGATAACAAAAA TAACAATTATCATAAT CAGT ACTATGATAATAGATA TGATCAAAATCAATA TERM 1256 990751 - 990722 - g 74 -5.9 -4.68512 | overlap 990719 990725 TGATAACAAAAATAA CAATTATCATAAT CAGT ACTATGATAATAG ATATGATCAAAATCA TERM 1257 990748 - 990725 - g 72 -6.2 -4.40123 | overlap 990722 990719 TAACAAAAATAACAA TTATCATAAT CAGT ACTATGATAA TAGATATGATCAAAA MSC_0869 990606 - 991355 + | hypothetical protein MSC_0870 991407 - 991817 + | hypothetical protein TERM 1258 991829 - 991839 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 993531 - 991858 - | IS1634CE transposase TERM 1259 993087 - 993115 + g 91 -8.3 -5.04356 | opp_overlap 993095, overlap 993092 993113 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1260 993092 - 993110 + g 79 -9 -3.48824 | opp_overlap 993095, overlap 993087 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1261 993627 - 993593 - H 75 -3.8 -5.60993 | gap 2, overlap 993573 993572 993595 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1262 993626 - 993595 - H 86 -8.9 -4.45201 | gap 1, overlap 993573 993572 993593 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 1263 993838 - 993812 - g 88 -5.2 -5.89659 | ACAAAAAAATAAAAA CCGTTATAGTTT TGA AAACCAAAACAG AGAATCAAAAAATGC MSC_0872 993696 - 993947 + | hypothetical protein ptsG 993997 - 996027 + | PTS system, glucose-specific, IIBC component TERM 1264 996213 - 996234 + F 87 -6 -5.67967 | opp_overlap 996212 996213 996215 AATTTTTAATTAAAG TACTCAAT TTATCT ATTGAGTA TTTTTTTATAGTGAT TERM 1265 996401 - 996385 - g 80 -3.1 -5.88197 | opp_overlap 996393 CTAAAGATAAAAAAA TTATTTA TTC TAAACAA TTTGGATATAATGAC TERM 1266 997171 - 997148 - g 72 -4 -5.31456 | overlap 997141 CCAACTTACAAAAAA CAATTTAAAA CAGT TTTTTAATTG AAATTTAAATGAAGA MSC_0874 996291 - 997265 + | hypothetical protein TERM 1267 997447 - 997437 - f 73 -2.6 -5.69023 | AAAAGATGAAAAAAA TATT AGG AATA GATCTTGGTGGGACT glk 997666 - 998394 + | glucokinase TERM 1268 998407 - 998431 + T 77 -8.7 -3.35283 | opp_overlap 998407 TAATATAATAAAAAA GTTCAAATGCT AAT AACATTTGAAC TTATAGAGTAGTTAT TERM 1269 998431 - 998407 - T 100 -10.9 -5.64304 | opp_overlap 998407 TAATATAATAAAAAA GTTCAAATGCT AAT AACATTTGAAC TTATAGAGTAGTTAT TERM 1270 998439 - 998453 + T 100 -7.2 -6.01369 | opp_overlap 998439 ATTTGAACTTATAGA GTAGTT ATT AACTAC TTTTTTTATTATTTA TERM 1271 998576 - 998586 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 1000278 - 998605 - | IS1634AZ transposase TERM 1272 999834 - 999862 + g 91 -8.3 -5.04356 | opp_overlap 999842, overlap 999839 999860 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1273 999839 - 999857 + g 79 -9 -3.48824 | opp_overlap 999842, overlap 999834 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1274 1000373 - 1000339 - R 70 -3.8 -5.24129 | gap 2, overlap 1000320 1000319 1000341 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1275 1000372 - 1000341 - R 84 -8.9 -4.25873 | gap 1, overlap 1000320 1000319 1000339 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG arcC 1001275 - 1000370 - | carbamate kinase TERM 1276 1001170 - 1001196 + g 70 -3.1 -5.4477 | overlap 1001173 TATCATTACCTTGAA CAATAAAATCT ACTAA AGATTTTGCTG TTTTTTTCACAATTT MSC_0878 1001611 - 1001288 - | putative membrane arginine transporter MSC_0879 1001819 - 1001655 - | hypothetical protein MSC_0880 1002153 - 1001908 - | hypothetical protein TERM 1277 1002619 - 1002603 - R 71 -5.3 -4.68506 | AATTAATTGTAAAAA TATTTTT AAT AAAAATA AAAAGTTCAAACACA TERM 1278 1002650 - 1002624 - R 100 -11.8 -5.74684 | opp_overlap 1002624 TAATAAAAATAAAAA GTTCAAACACAA ATT TTGTATTTGAAC TTTTGTAGTAAAATT TERM 1279 1002624 - 1002650 + r 93 -9.6 -4.47328 | opp_overlap 1002624 TAATAAAAATAAAAA GTTCAAACACAA ATT TTGTATTTGAAC TTTTGTAGTAAAATT mgtA 1005505 - 1003571 - | magnesium ABC transporter ATPase TERM 1280 1005475 - 1005488 + g 71 -5.3 -4.65895 | overlap 1005467 TTGTTATTTTTTTAG GAGAA AACT TTCTC TTTTTAAATAAAAAC TERM 1281 1005927 - 1005892 - g 73 -4.2 -5.25772 | overlap 1005895 1005898 AAATGATAACAAAAA TAACAATTATCATAAT CAGT ACTATGATAATAGATA TGATCAAAATCAATA TERM 1282 1005924 - 1005895 - g 74 -5.9 -4.68512 | overlap 1005892 1005898 TGATAACAAAAATAA CAATTATCATAAT CAGT ACTATGATAATAG ATATGATCAAAATCA TERM 1283 1005921 - 1005898 - g 72 -6.2 -4.40123 | overlap 1005895 1005892 TAACAAAAATAACAA TTATCATAAT CAGT ACTATGATAA TAGATATGATCAAAA MSC_0882 1005779 - 1006990 + | hypothetical protein TERM 1284 1007002 - 1007012 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 1285 1008259 - 1008287 + T 88 -8.3 -4.83593 | opp_overlap 1008267, overlap 1008264 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATAATTCTT TERM 1286 1008264 - 1008282 + T 77 -9 -3.47218 | opp_overlap 1008267, overlap 1008259 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATAA TERM 1287 1008802 - 1008768 - T 75 -3.8 -5.60993 | gap 2, overlap 1008748 1008747 1008770 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1288 1008801 - 1008770 - T 86 -8.9 -4.45201 | gap 1, overlap 1008748 1008747 1008768 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 1289 1008879 - 1008915 + T 84 -4.7 -5.64321 | gap 1, opp_overlap 1008879 TTATATTAAAAAAAA CCTATACTATTTTCTA TTAATT TAG-AACTAGTATAGG TTTTTATTTTATTAT TERM 1290 1008915 - 1008879 - T 88 -4.7 -5.90981 | gap 1, opp_overlap 1008879 TTATATTAAAAAAAA CCTATACTATTTTCTA TTAATT TAG-AACTAGTATAGG TTTTTATTTTATTAT atpC 1009226 - 1008927 - | ATP synthase epsilon chain TERM 1291 1009040 - 1009059 + g 73 -2.2 -5.79595 | CTAAGCCTTGATCAA CATGTATA TAAG TATATGTG TTTTTTATTTTAAAG atpD 1010653 - 1009226 - | F0F1 ATP synthase subunit beta atpG 1011504 - 1010662 - | F0F1 ATP synthase subunit gamma TERM 1292 1011064 - 1011078 + g 70 -4.3 -5.04601 | AGCTAATAAATCATT GCTAA TAATT TTAGC TTTTTCGTTTGTAAA atpA 1013083 - 1011506 - | F0F1 ATP synthase subunit alpha atpH 1013640 - 1013095 - | F0F1 ATP synthase subunit delta atpF 1014187 - 1013642 - | ATP synthase B chain atpE 1014521 - 1014216 - | ATP synthase C chain atpB 1015414 - 1014551 - | F0F1 ATP synthase subunit A MSC_0892 1015812 - 1015432 - | hypothetical protein TERM 1293 1015922 - 1015938 + r 79 -8.1 -4.02534 | opp_overlap 1015922 AGTAAATAAAAAAAA TGATACA CAA TGTATCA TTTATAAATTTGAAT TERM 1294 1015938 - 1015922 - R 100 -8.1 -6.25578 | opp_overlap 1015922 AGTAAATAAAAAAAA TGATACA CAA TGTATCA TTTATAAATTTGAAT upp 1016636 - 1015953 - | uracil phosphoribosyltransferase TERM 1295 1016669 - 1016651 - R 70 -4.6 -5.01732 | AATTTTTTTAAAAAA GTACTC AAAAAAA GAGTAC TTAAAATTAGTATTT glyA 1017917 - 1016676 - | serine hydroxymethyltransferase rpiB 1018398 - 1017901 - | ribose 5-phosphate isomerase, RpiB MSC_0896 1018423 - 1018719 + | hypothetical protein lpp 1020914 - 1018728 - | prolipoprotein tnpA 1021035 - 1021577 + | IS1296AC_R transposase protein A TERM 1296 1022428 - 1022384 - g 93 -7.3 -5.64321 | opp_overlap 1022385 1022388 1022390, overlap 1022385 1022390 AGAATAAAAGAAAAA TTAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTAT AATATTGAAAAATTT TERM 1297 1022427 - 1022385 - g 95 -10.8 -3.94933 | opp_overlap 1022385 1022388 1022390, overlap 1022384 1022390 GAATAAAAGAAAAAT TAAAAGGATTGTCTCCTGTA CAA TTCAGAAAACAATCCTGTTA TAATATTGAAAAATT TERM 1298 1022422 - 1022390 - g 100 -10.7 -4.88326 | opp_overlap 1022390 1022388 1022385, overlap 1022385 1022384 AAAGAAAAATTAAAA GGATTGTCTCCTGTA CAA TTCAGAAAACAATCC TGTTATAATATTGAA tnpB 1021586 - 1022446 + | IS1296AC_R transposase protein B MSC_0900 1023390 - 1022485 - | hypothetical protein MSC_0901 1024430 - 1023468 - | hypothetical protein TERM 1299 1024626 - 1024644 + r 81 -10.4 -2.57548 | opp_overlap 1024626, overlap 1024625 CTAAAAGAATAAAAA CTCACAAT TTA ATTGTGAG CTTAATCATATTATT TERM 1300 1024644 - 1024626 - R 100 -10.4 -5.4593 | opp_overlap 1024626 1024625 CTAAAAGAATAAAAA CTCACAAT TTA ATTGTGAG CTTAATCATATTATT pyrG 1025316 - 1024666 - | CTP synthetase TERM 1301 1025411 - 1025377 - H 70 -3.8 -5.24129 | gap 2, overlap 1025358 1025357 1025379 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1302 1025410 - 1025379 - H 84 -8.9 -4.25873 | gap 1, overlap 1025358 1025357 1025377 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 1303 1025588 - 1025643 + G 82 -5.6 -5.5604 | gap 1, opp_overlap 1025587 1025589 1025592, overlap 1025589 1025592 1025631 TTCCAATTAACAAAC ACAGCTGCTAACTGAGCAATTACTTTT GGT AGAGGTAATGGTTCAGTT-GCTGTTGC TTTTTTATTAGTTAA TERM 1304 1025589 - 1025642 + G 81 -9.1 -3.91997 | gap 1, opp_overlap 1025589 1025587 1025592, overlap 1025588 1025592 1025631 TCCAATTAACAAACA CAGCTGCTAACTGAGCAATTACTTTT GGT AGAGGTAATGGTTCAGTT-GCTGTTG CTTTTTTATTAGTTA TERM 1305 1025592 - 1025639 + G 73 -7.2 -4.04157 | gap 1, opp_overlap 1025589 1025587 1025592, overlap 1025589 1025588 1025631 AATTAACAAACACAG CTGCTAACTGAGCAATTACTTTT GGT AGAGGTAATGGTTCAGTT-GCTG TTGCTTTTTTATTAG uhpT 1025396 - 1026802 + | hexose phosphate transport protein TERM 1306 1026819 - 1026805 - T 72 -3.6 -5.3167 | CAAAAAGAAATAAAA TAAGAA AAA TTCCTA ATGATCTAAACCCCC TERM 1307 1026871 - 1026915 + T 93 -7.3 -5.64321 | opp_overlap 1026872 1026875 1026877, overlap 1026872 1026877 AAATTTTTCAATATT ATAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 1308 1026872 - 1026914 + T 95 -10.8 -3.94933 | opp_overlap 1026872 1026875 1026877, overlap 1026871 1026877 AATTTTTCAATATTA TAACAGGATTGTTTTCTGAA TTG TACAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 1309 1026877 - 1026909 + T 100 -10.7 -4.88326 | opp_overlap 1026875 1026872 1026877, overlap 1026872 1026871 TTCAATATTATAACA GGATTGTTTTCTGAA TTG TACAGGAGACAATCC TTTTAATTTTTCTTT tnpB 1027713 - 1026853 - | IS1296DS transposase protein B tnpA 1028264 - 1027722 - | IS1296DS transposase protein A TERM 1310 1029537 - 1029556 + G 88 -5 -5.82036 | opp_overlap 1029537 GAATAAGGACAAAAA TGGCAAGT ATGC AATTGCCA TTTTTTATTTGTTCT TERM 1311 1029556 - 1029537 - g 72 -5 -5.03945 | opp_overlap 1029537 GAATAAGGACAAAAA TGGCAAGT ATGC AATTGCCA TTTTTTATTTGTTCT MSC_0906 1028605 - 1029618 + | hypothetical protein TERM 1312 1029825 - 1029796 - gf 74 -5.9 -4.57341 | opp_overlap 1029796, overlap 1029816 AATTGTTGTTAAAAA GTTTTCAGTATTT AAAA AAATACTAGAAAC TCTAGTAGAACCGTT TERM 1313 1029832 - 1029816 - gf 100 -8.1 -5.48825 | opp_overlap 1029796, overlap 1029796 CAGTATTTAAAAAAA TACTAGA AAC TCTAGTA GAACCGTTTAATTTG TERM 1314 1030778 - 1030768 - gf 73 -5.4 -4.88485 | opp_overlap 1030768 TAATCAAAAAAATAA GCTT TTA AAGC AATATTTTTTTTATA TERM 1315 1032010 - 1032022 + GF 74 -4.9 -5.10497 | opp_overlap 1032010, overlap 1032001 TTTAGTTTTAAGAAC TGATA AGC TATCA TTTTTTAAATCAATT mgtA 1029536 - 1032268 + | Mg2+ transport ATPase, P-type 1 TERM 1316 1032547 - 1032562 + GF 75 -4 -5.55664 | opp_overlap 1032538, overlap 1032538 AAAATGGAACTATAG GTTCTT GATC AAGAGC TTTTTTTGGTCATAA MSC_0908 1032327 - 1033865 + | amino acid permease MSC_0909 1033837 - 1034517 + | hypothetical protein TERM 1317 1034532 - 1034545 + F 95 -5.3 -5.99154 | ACTATTAATTTATTA GACTT TAAG AAGTC TTTTTTTATTTAATA MSC_0910 1034663 - 1036243 + | amino acid permease TERM 1318 1036227 - 1036254 + F 78 -5.7 -5.16151 | opp_overlap 1036232, overlap 1036232 AAATTCAAATCATAG CAAAACCTACA ACTTAG TGTAGGTTTTA TTTTTGTTAAATTTA TERM 1319 1036232 - 1036249 + F 81 -5.6 -5.42605 | opp_overlap 1036232, overlap 1036227 CAAATCATAGCAAAA CCTACA ACTTAG TGTAGG TTTTATTTTTGTTAA pgsA 1036323 - 1036943 + | cdpdiacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase gidB 1036943 - 1037356 + | glucose-inhibited division protein B MSC_0913 1037639 - 1037839 + | hypothetical protein MSC_0914 1037875 - 1038969 + | translation-associated GTPase TERM 1320 1039171 - 1039143 - gf 77 -7.7 -4.02163 | opp_overlap 1039149, overlap 1039149 ACATATCAAGAATAA TAAAAATTCAAAA CAA TTATGAATTTTTA AGAGTTTATGATTTT MSC_0915 1038935 - 1039648 + | hypothetical protein TERM 1321 1040743 - 1040762 + G 70 -3.6 -5.19212 | overlap 1040744 1040747 AAAAAGAAAGTATCT TTAGTTGC TTTT GCAATTAG TTTTTTAGTAATGAT MSC_0916 1039717 - 1041483 + | hypothetical protein TERM 1322 1041489 - 1041510 + F 93 -7.4 -5.66229 | opp_overlap 1041489 AATATCTTAAAAAAA GACTTACA AAAAAA TGTAAGTC TTTTTTGTTCTTGCT TERM 1323 1041510 - 1041489 - f 91 -7.4 -5.46629 | opp_overlap 1041489 AATATCTTAAAAAAA GACTTACA AAAAAA TGTAAGTC TTTTTTGTTCTTGCT TERM 1324 1041541 - 1041567 + F 70 -7.6 -3.4557 | opp_overlap 1041541, overlap 1041540 TGGATTTTGTTATAA TTTTATTTATAA TTT TTATAAATAAGA CTTTTAATTTTTAGA TERM 1325 1041654 - 1041664 + F 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA TERM 1326 1042917 - 1042945 + F 91 -8.3 -5.04356 | opp_overlap 1042925, overlap 1042922 1042943 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1327 1042922 - 1042940 + F 79 -9 -3.48824 | opp_overlap 1042925, overlap 1042917 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1328 1043457 - 1043423 - f 75 -3.8 -5.60993 | gap 2, overlap 1043403 1043402 1043425 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1329 1043456 - 1043425 - f 86 -8.9 -4.45201 | gap 1, overlap 1043403 1043402 1043423 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG MSC_0918 1043458 - 1043748 + | hypothetical protein TERM 1330 1043774 - 1043753 - f 83 -7.4 -5.09173 | opp_overlap 1043753, overlap 1043743 CAATATCTTAAAAAA GACTTACA AAAAAA TGTAAGTC TTTTTTGTTCTTGCT TERM 1331 1043753 - 1043774 + F 93 -7.4 -5.66229 | opp_overlap 1043743 1043753 CAATATCTTAAAAAA GACTTACA AAAAAA TGTAAGTC TTTTTTGTTCTTGCT TERM 1332 1043805 - 1043831 + F 70 -7.6 -3.4557 | opp_overlap 1043805, overlap 1043804 TGGATTTTGTTATAA TTTTATTTATAA TTT TTATAAATAAGA CTTTTAATTTTTAGA MSC_0919 1043857 - 1045320 + | hypothetical protein MSC_0920 1045427 - 1045717 + | hypothetical protein TERM 1333 1045697 - 1045707 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 1047315 - 1045726 - | IS1634CD transposase TERM 1334 1046955 - 1046983 + g 91 -8.3 -5.04356 | opp_overlap 1046963, overlap 1046960 1046981 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1335 1046960 - 1046978 + g 79 -9 -3.48824 | opp_overlap 1046963, overlap 1046955 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1336 1047494 - 1047460 - H 75 -3.8 -5.60993 | gap 2, overlap 1047441 1047440 1047462 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1337 1047493 - 1047462 - H 86 -8.9 -4.45201 | gap 1, overlap 1047441 1047440 1047460 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG MSC_0922 1047692 - 1048894 + | prolipoprotein TERM 1338 1049215 - 1049195 - gf 70 -4.1 -5.17054 | overlap 1049181 1049186 1049207 AGAATATTTAAAAAA TTCAAATGA AGA TAATTTGAA AAAATTAAAGAATTT MSC_0923 1048881 - 1049711 + | hypothetical protein MSC_0924 1049668 - 1050600 + | hypothetical protein TERM 1339 1050600 - 1050610 + F 90 -6.8 -5.64873 | opp_overlap 1050598 1050600 ATATCTAAACAAATA GCCT TAT AGGC TTTTTTGTTATTCAA MSC_0925 1050679 - 1051179 + | hypothetical protein abc 1051157 - 1051369 + | ABC transporter, ATP-binding component TERM 1340 1052075 - 1052059 - g 70 -3.7 -5.093 | opp_overlap 1052059, overlap 1052061 TTTAAAACAAGAAAA TATTAGC AAT GCTAAGA TTAATGATTTAAAAT MSC_0927 1051862 - 1052236 + | hypothetical protein MSC_0928 1052753 - 1052887 + | hypothetical protein MSC_0929 1052862 - 1053002 + | hypothetical protein TERM 1341 1053304 - 1053338 + T 75 -3.8 -5.60993 | gap 2, overlap 1053305 1053334 1053335 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 1342 1053305 - 1053336 + T 86 -8.9 -4.45201 | gap 1, overlap 1053304 1053334 1053335 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 1343 1053844 - 1053816 - T 91 -8.3 -5.04356 | opp_overlap 1053824, overlap 1053806 1053821 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1344 1053839 - 1053821 - T 79 -9 -3.48824 | opp_overlap 1053824, overlap 1053816 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 1345 1055101 - 1055091 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1346 1055275 - 1055228 - T 100 -14.6 -3.15252 | opp_overlap 1055242, overlap 1055242 AAATCAATTACTTAA TAAAAACAAAAAAAGCAAATAG ATAG CTATTTGCTTTTTTTGATATTA AAAATTATCTTATTG TERM 1347 1055261 - 1055242 - T 100 -9.4 -6.23317 | opp_overlap 1055242, overlap 1055228 ATAAAAACAAAAAAA GCAAATAG ATAG CTATTTGC TTTTTTTGATATTAA TERM 1348 1055242 - 1055261 + T 100 -9.4 -5.63374 | opp_overlap 1055242 1055228 ATAAAAACAAAAAAA GCAAATAG ATAG CTATTTGC TTTTTTTGATATTAA TERM 1349 1055732 - 1055749 + T 73 -3.5 -5.50499 | gap 1 TCTGGAATATTTATA CAAG-CAT AAC ATGTCTTG TTTTTTTGGGTGTAA TERM 1350 1055760 - 1055783 + T 76 -8.4 -3.66844 | opp_overlap 1055767, overlap 1055767 TCTTGTTTTTTTGGG TGTAAATTTT TTTC AAAATTTACA TTATTACAATATCAA topA 1057773 - 1055842 - | DNA topoisomerase I TERM 1351 1058167 - 1058183 + G 72 -3.8 -5.42259 | opp_overlap 1058159, overlap 1058163 CAATTGATTTCTTAT TTAGAA AATAA TTCTAA TTTTTTTAAAGATGA MSC_0932 1058020 - 1058775 + | hypothetical protein TERM 1352 1058786 - 1058815 + T 72 -8.1 -3.17136 | opp_overlap 1058794, overlap 1058784 1058794 TCTAGTTGTCTTACA TTAAAAAAGGATA ATAT TATCCTTTTTTAC TAATTATTTTCTATT TERM 1353 1058807 - 1058794 - T 78 -5.3 -5.21709 | opp_overlap 1058786 1058784 1058794 TCTTACATTAAAAAA GGATA ATAT TATCC TTTTTTACTAATTAT TERM 1354 1058794 - 1058807 + T 78 -5.3 -5.22794 | opp_overlap 1058794, overlap 1058786 1058784 TCTTACATTAAAAAA GGATA ATAT TATCC TTTTTTACTAATTAT MSC_0933 1059114 - 1058815 - | hypothetical protein TERM 1355 1059417 - 1059427 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 1061119 - 1059446 - | IS1634BY transposase TERM 1356 1060675 - 1060703 + g 91 -8.3 -5.04356 | opp_overlap 1060683, overlap 1060680 1060701 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1357 1060680 - 1060698 + g 79 -9 -3.48824 | opp_overlap 1060683, overlap 1060675 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1358 1061185 - 1061161 - R 75 -8.9 -3.25505 | overlap 1061160 1061182 1061184 AAAAGCATAATAAAT TATATTTTTTT ATA AAAAAAATATA GCCGCTGAAAACTGA TERM 1359 1061216 - 1061182 - R 83 -3.8 -5.93809 | gap 2, overlap 1061161 1061160 1061184 TTTTTATAAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1360 1061215 - 1061184 - R 89 -8.9 -4.62054 | gap 1, overlap 1061161 1061160 1061182 TTTATAAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 1361 1061292 - 1061320 + r 90 -5.5 -5.86465 | overlap 1061295 ACTCATATAGTTAAT TATTGGAAAAATA AGT TATTTTTTCATTA TTTTTTTATCTTATT TERM 1362 1061295 - 1061317 + r 83 -7.2 -4.94703 | overlap 1061292 CATATAGTTAATTAT TGGAAAAATA AGT TATTTTTTCA TTATTTTTTTATCTT TERM 1363 1061450 - 1061431 - R 93 -8 -5.2015 | opp_overlap 1061431 TTAATAATAGAAAAA GAAGTATT TGAA AATACTTC TTTTTAAATAAAAAT TERM 1364 1061431 - 1061450 + r 83 -8 -4.66163 | opp_overlap 1061431 TTAATAATAGAAAAA GAAGTATT TGAA AATACTTC TTTTTAAATAAAAAT TERM 1365 1061508 - 1061481 - R 86 -5.7 -5.69023 | opp_overlap 1061481 AAAATATTAAAAAAA CCCAGTTTT AATTGGCTAA AAAACTGGG TTTACCATTACATTA MSC_0935 1062561 - 1061632 - | hypothetical protein MSC_0936 1063253 - 1062573 - | hypothetical protein MSC_0937 1064004 - 1063492 - | hypothetical protein trxB 1064945 - 1064013 - | thioredoxin reductase (NADPH) lgt(-rpoD) 1066509 - 1064929 - | prolipoprotein diacylglyceryl transferase and tran TERM 1366 1065389 - 1065411 + g 72 -5 -4.98672 | opp_overlap 1065389, overlap 1065380 TTTTTATTAATTAAA TCTAATTG ATGTTTA CAATTAGA TTTTGTGTTTTTAAA ptsK 1067461 - 1066520 - | HPr kinase/phosphorylase TERM 1367 1067531 - 1067518 - R 78 -4.5 -5.56264 | opp_overlap 1067512 1067518, overlap 1067511 TTTAAACATAAAAAA GCGCT AATA AGCAC TTTTTGTATTAGAAT MSC_0941 1068214 - 1067540 - | hypothetical protein folC 1069351 - 1068242 - | dihydrofolate:folylpolyglutamate synthase uvrA 1072184 - 1069344 - | excinuclease ABC subunit A uvrB 1074208 - 1072193 - | excinuclease ABC subunit B TERM 1368 1074213 - 1074229 + H 78 -6.6 -4.83269 | opp_overlap 1074212 1074213 TCCCATAACAAAAAC CCAGAA TTTTC TTCTGG TTTTTAATATCATCT TERM 1369 1074352 - 1074338 - H 82 -4.4 -5.70829 | overlap 1074349 AAGATTATAAAAAAA TAAATT ATT AATTTA TAAAAATAAAAGTAT MSC_0945 1074468 - 1075427 + | hypothetical protein MSC_0946 1075430 - 1076899 + | hypothetical protein TERM 1370 1077151 - 1077178 + F 74 -8.6 -3.35992 | opp_overlap 1077151, overlap 1077158 1077177 TCCAATTAGAAAAAA TTAAAAATAGCC TATG GGCTATTTTTTA TTAATTAAAATAAGT TERM 1371 1077178 - 1077151 - f 100 -8.6 -5.37345 | opp_overlap 1077151 1077158 1077177 TCCAATTAGAAAAAA TTAAAAATAGCC TATG GGCTATTTTTTA TTAATTAAAATAAGT TERM 1372 1077158 - 1077171 + F 88 -6.7 -5.5604 | opp_overlap 1077151, overlap 1077151 AGAAAAAATTAAAAA TAGCC TATG GGCTA TTTTTTATTAATTAA MSC_0947 1077275 - 1078072 + | deoxyribonuclease, TatD related MSC_0948 1078126 - 1078329 + | hypothetical protein MSC_0949 1079517 - 1078579 - | hypothetical protein TERM 1373 1079118 - 1079102 - G 70 -3.8 -5.24416 | CAATGAGAATAAAAA TTATTG TAGTT CAATAA GTCCACCGAATAAAA dcm 1079671 - 1080021 + | cytosine-specific DNA-methyltransferase TERM 1374 1080663 - 1080651 - g 77 -3.5 -5.77856 | opp_overlap 1080651 AACAAATTAAAAAAA TAAAT GAA ATTTA TATTAATGAAAATAT dam 1080407 - 1081150 + | adenine-specific DNA-methyltransferase TERM 1375 1081216 - 1081186 - f 73 -5.6 -4.75174 | opp_overlap 1081186 CACCCAACCCAAAAA TCTTTAAAACTACT TGA AGAACTTTTAAAGA TTCATACTAATGAAA prs 1081475 - 1082548 + | ribose-phosphate pyrophosphokinase MSC_0953 1082638 - 1082787 + | hypothetical protein pth 1082969 - 1083529 + | peptidyl-tRNA hydrolase TERM 1376 1083531 - 1083546 + F 93 -7.6 -5.18357 | opp_overlap 1083521 1083531 ATAAATATAATTAAA CTTCGT TTTT ACGAAG TTTTTTAATAAGTTG TERM 1377 1083546 - 1083531 - f 77 -7.6 -4.12405 | opp_overlap 1083531, overlap 1083521 ATAAATATAATTAAA CTTCGT TTTT ACGAAG TTTTTTAATAAGTTG rplI 1083641 - 1084111 + | 50S ribosomal protein L9 TERM 1378 1084948 - 1084933 - g 70 -2.6 -5.46706 | ATTGCAAAAGAAAAA TTAGAA GAAA TTCCAA TTTATATTGATGCTA dnaC 1084096 - 1085412 + | replicative DNA helicase DnaC MSC_0957 1085479 - 1086780 + | prolipoprotein MSC_0958 1086923 - 1087849 + | hypothetical protein TERM 1379 1088861 - 1088845 - g 73 -4.5 -5.1861 | opp_overlap 1088845 TTTATTATTAAAAAA GATTTAA AAA TCAAATC TATTAACTCATCTGA cysS 1087858 - 1089183 + | cysteine-tRNA ligase spoU 1089185 - 1089919 + | rRNA methylase MSC_0961 1090141 - 1090455 + | hypothetical protein nusG 1090472 - 1091113 + | transcription antitermination protein NUSG TERM 1380 1091157 - 1091143 - f 79 -7.2 -4.70739 | opp_overlap 1091143, overlap 1091138 1091134 CAAAAATAACTAAAA CTAGTT CAA AACTAG TTTTTTTATTATTAA TERM 1381 1091143 - 1091157 + F 95 -7.2 -5.95946 | opp_overlap 1091138 1091134 1091143 CAAAAATAACTAAAA CTAGTT CAA AACTAG TTTTTTTATTATTAA TERM 1382 1091215 - 1091187 - f 100 -6.3 -6.25578 | opp_overlap 1091192 ATTAAATAAAAAAAA TAAAATATATTTT TAA AAAATATATTTTT ATAAGGTTAGAAAAA TERM 1383 1091192 - 1091210 + F 76 -6.2 -4.87786 | opp_overlap 1091187 ATAAAAAAAATAAAA TATATTTT TAA AAAATATA TTTTTATAAGGTTAG TERM 1384 1091589 - 1091577 - g 74 -4.9 -5.1361 | ATAAATTTTAAAAAA TATGT ATG ACATA AATATGCTATATCTG TERM 1385 1093453 - 1093436 - g 73 -2.1 -5.70761 | AAAAGAAAACAAAAA TTTATTA ATCA CAATAAA AGAAGTACTTAAAGA TERM 1386 1094939 - 1094903 - g 76 -8.1 -3.71148 | overlap 1094906 TAAAATTGACTTAAA TTATCCTGCACTTAAAA ATA TTTTTGGTGCAGGATTA CCATCTGAAGCAAAT TERM 1387 1094936 - 1094906 - g 82 -9.8 -2.94888 | overlap 1094903 AATTGACTTAAATTA TCCTGCACTTAAAA ATA TTTTTGGTGCAGGA TTACCATCTGAAGCA TERM 1388 1096598 - 1096583 - g 74 -6.2 -4.64598 | opp_overlap 1096582 TAATGAGGCTAAAAA TAAAGC TGAA GCTTTA AATTTAAAATATCAT MSC_0963 1091553 - 1097471 + | hypothetical protein oppA 1097481 - 1100438 + | oligopeptide ABC transporter, substrate-binding component TERM 1389 1100505 - 1100494 - g 73 -4.4 -5.20216 | TACATTACCAAAAAA TGCT ATAG AGCA TAAACAACATGTAGA oppB 1100438 - 1101511 + | oligopeptide ABC transporter, permease component oppC 1101513 - 1102523 + | oligopeptide ABC transporter, permease component oppD 1102531 - 1103976 + | oligopeptide ABC transporter, ATP-binding component TERM 1390 1104694 - 1104678 - g 75 -9.5 -2.51045 | overlap 1104677 1104680 CTATTTATAATAGAT TAGCTGA ATC TCAGCTA CAAAGACAAACTTTA TERM 1391 1104776 - 1104764 - g 70 -6.3 -4.24002 | opp_overlap 1104772 GTTGAAATTCTAAAA CAAGT TGG ACTTG ATGAAAGTGTTTTAT TERM 1392 1104970 - 1104956 - g 86 -5.8 -5.65927 | opp_overlap 1104956 1104953 GAGTTAAAGAAAAAA TATAGT TTA ACTATA TTATTTATTGCTCAT oppF 1103969 - 1105303 + | oligopeptide ABC transporter, ATP-binding component TERM 1393 1105331 - 1105301 - T 100 -14.3 -4.5081 | opp_overlap 1105301 1105307, overlap 1105307 AAATATCTAAATAAA TAAAAATGCTAGG TCCCC CCTAGCATTTTTA TTCTAATATTTTTCC TERM 1394 1105301 - 1105331 + T 100 -14.3 -3.64164 | opp_overlap 1105301 1105307, overlap 1105307 AAATATCTAAATAAA TAAAAATGCTAGG TCCCC CCTAGCATTTTTA TTCTAATATTTTTCC TERM 1395 1105325 - 1105307 - T 100 -8.9 -5.5454 | opp_overlap 1105301 1105307, overlap 1105301 CTAAATAAATAAAAA TGCTAGG TCCCC CCTAGCA TTTTTATTCTAATAT TERM 1396 1105307 - 1105325 + T 100 -8.9 -5.2291 | opp_overlap 1105307 1105301, overlap 1105301 CTAAATAAATAAAAA TGCTAGG TCCCC CCTAGCA TTTTTATTCTAATAT TERM 1397 1105404 - 1105414 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 1107106 - 1105433 - | IS1634BQ transposase TERM 1398 1106662 - 1106690 + g 91 -8.3 -5.04356 | opp_overlap 1106670, overlap 1106667 1106688 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1399 1106667 - 1106685 + g 79 -9 -3.48824 | opp_overlap 1106670, overlap 1106662 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1400 1107201 - 1107167 - R 70 -3.8 -5.24129 | gap 2, overlap 1107148 1107147 1107169 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGG TERM 1401 1107200 - 1107169 - R 84 -8.9 -4.25873 | gap 1, overlap 1107148 1107147 1107167 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG glf 1108422 - 1107496 - | UDP-galactopyranose mutase galE 1109439 - 1108435 - | UDP-glucose 4-epimerase TERM 1402 1109114 - 1109129 + g 74 -6.2 -4.6856 | opp_overlap 1109114 1109112 1109108 ACAAAATAATTAACA TTATGC GCTT GCATAA TTTTTAAAGTATTTA MSC_0972 1109812 - 1109958 + | hypothetical protein epsG 1109940 - 1111088 + | glycosyltransferase TERM 1403 1111122 - 1111104 - T 100 -8.2 -5.31519 | opp_overlap 1111094 1111104 ATATTTAAACAAAAA GCAAGTAT TAA ACACTTGC TTTTTTTATAGTTAT TERM 1404 1111104 - 1111122 + T 87 -6 -5.73339 | opp_overlap 1111104, overlap 1111094 ATATTTAAACAAAAA GCAAGTAT TAA ACACTTGC TTTTTTTATAGTTAT cps 1111941 - 1111141 - | glycosyltransferase TERM 1405 1112426 - 1112410 - g 75 -9.5 -2.51045 | overlap 1112409 1112412 CTATTTATAATAGAT TAGCTGA ATC TCAGCTA CAAAGACAAACTTTA TERM 1406 1112508 - 1112496 - g 70 -6.3 -4.24002 | opp_overlap 1112504 GTTGAAATTCTAAAA CAAGT TGG ACTTG ATGAAAGTGTTTTAT TERM 1407 1112702 - 1112688 - g 86 -5.8 -5.65927 | opp_overlap 1112688 1112685 GAGTTAAAGAAAAAA TATAGT TTA ACTATA TTATTTATTGCTCAT oppF 1112073 - 1113035 + | oligopeptide ABC transporter, permease component TERM 1408 1113106 - 1113116 + T 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 1114808 - 1113135 - | IS1634BN transposase TERM 1409 1114364 - 1114392 + g 91 -8.3 -5.04356 | opp_overlap 1114372, overlap 1114369 1114390 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1410 1114369 - 1114387 + g 79 -9 -3.48824 | opp_overlap 1114372, overlap 1114364 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1411 1114904 - 1114870 - R 75 -3.8 -5.60993 | gap 2, overlap 1114850 1114849 1114872 TTTTTTATAAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1412 1114903 - 1114872 - R 86 -8.9 -4.45201 | gap 1, overlap 1114850 1114849 1114870 TTTTATAAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 1413 1114976 - 1115006 + r 100 -14.3 -3.64164 | opp_overlap 1114976 1114982, overlap 1114982 AAATATCTAAATAAA TAAAAATGCTAGG TCCCC CCTAGCATTTTTA TTCTAATATTTTTAA TERM 1414 1115006 - 1114976 - R 100 -14.3 -4.5081 | opp_overlap 1114976 1114982, overlap 1114982 AAATATCTAAATAAA TAAAAATGCTAGG TCCCC CCTAGCATTTTTA TTCTAATATTTTTAA TERM 1415 1115000 - 1114982 - R 100 -8.9 -5.5454 | opp_overlap 1114976 1114982, overlap 1114976 CTAAATAAATAAAAA TGCTAGG TCCCC CCTAGCA TTTTTATTCTAATAT TERM 1416 1114982 - 1115000 + r 100 -8.9 -5.2291 | opp_overlap 1114982 1114976, overlap 1114976 CTAAATAAATAAAAA TGCTAGG TCCCC CCTAGCA TTTTTATTCTAATAT glf 1116204 - 1115278 - | UDP-galactopuranose mutase galE 1117221 - 1116217 - | UDP-glucose 4-epimerase TERM 1417 1116896 - 1116911 + g 74 -6.2 -4.6856 | opp_overlap 1116894 1116890 1116896 ACAAAATAATTAACA TTATGC GCTT GCATAA TTTTTAAAGTATTTA MSC_0979 1117524 - 1117742 + | hypothetical protein epsG 1117724 - 1118872 + | glycosyltransferase TERM 1418 1118906 - 1118888 - f 100 -8.2 -5.31519 | opp_overlap 1118878 1118888 ATATTTAAACAAAAA GCAAGTAT TAA ACACTTGC TTTTTTTATAGTTAT TERM 1419 1118888 - 1118906 + F 87 -6 -5.73339 | opp_overlap 1118888, overlap 1118878 ATATTTAAACAAAAA GCAAGTAT TAA ACACTTGC TTTTTTTATAGTTAT TERM 1420 1118957 - 1118991 + F 70 -3.8 -5.24129 | gap 2, overlap 1118958 1118987 1118988 CCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 1421 1118958 - 1118989 + F 84 -8.9 -4.25873 | gap 1, overlap 1118957 1118987 1118988 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 1422 1119496 - 1119468 - g 91 -8.3 -5.04356 | opp_overlap 1119476, overlap 1119458 1119473 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1423 1119491 - 1119473 - g 79 -9 -3.48824 | opp_overlap 1119476, overlap 1119468 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 1119052 - 1120725 + | IS1634AV transposase TERM 1424 1120754 - 1120744 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC cps 1121610 - 1120795 - | glycosyltransferase TERM 1425 1122095 - 1122079 - g 75 -9.5 -2.51045 | overlap 1122078 1122081 CTATTTATAATAGAT TAGCTGA ATC TCAGCTA CAAAGACAAACTTTA TERM 1426 1122177 - 1122165 - g 70 -6.3 -4.24002 | opp_overlap 1122173 GTTGAAATTCTAAAA CAAGT TGG ACTTG ATGAAAGTGTTTTAT TERM 1427 1122368 - 1122354 - g 86 -5.8 -5.65927 | opp_overlap 1122354 1122351 GAGTTAAAGAAAAAA TATAGT TTA ACTATA TTATTTATTGCTCAT oppF 1121742 - 1122701 + | oligopeptide ABC transporter, ATP-binding component TERM 1428 1122699 - 1122729 + T 100 -14.3 -3.64164 | opp_overlap 1122699 1122705, overlap 1122705 AAATATCTAAATAAA TAAAAATGCTAGG TCCCC CCTAGCATTTTTA TTCTAATATTTTTAA TERM 1429 1122729 - 1122699 - T 100 -14.3 -4.5081 | opp_overlap 1122699 1122705, overlap 1122705 AAATATCTAAATAAA TAAAAATGCTAGG TCCCC CCTAGCATTTTTA TTCTAATATTTTTAA TERM 1430 1122723 - 1122705 - T 100 -8.9 -5.5454 | opp_overlap 1122705 1122699, overlap 1122699 CTAAATAAATAAAAA TGCTAGG TCCCC CCTAGCA TTTTTATTCTAATAT TERM 1431 1122705 - 1122723 + T 100 -8.9 -5.2291 | opp_overlap 1122699 1122705, overlap 1122699 CTAAATAAATAAAAA TGCTAGG TCCCC CCTAGCA TTTTTATTCTAATAT glf 1123928 - 1122741 - | UDP-galactopyranose mutase galE 1124945 - 1124313 - | UDP-glucose 4-epimerase TERM 1432 1124620 - 1124635 + g 74 -6.2 -4.6856 | opp_overlap 1124618 1124614 1124620 ACAAAATAATTAACA TTATGC GCTT GCATAA TTTTTAAAGTATTTA MSC_0986 1125248 - 1125466 + | hypothetical protein epsG 1125448 - 1126596 + | glycosyltransferase TERM 1433 1126630 - 1126612 - T 100 -8.2 -5.31519 | opp_overlap 1126612 1126602 ATATTTAAACAAAAA GCAAGTAT TAA ACACTTGC TTTTTTTATAGTTAT TERM 1434 1126612 - 1126630 + T 87 -6 -5.73339 | opp_overlap 1126612, overlap 1126602 ATATTTAAACAAAAA GCAAGTAT TAA ACACTTGC TTTTTTTATAGTTAT cps 1127563 - 1126649 - | glycosyltransferase TERM 1435 1127931 - 1127887 - R 76 -4.5 -5.27476 | CTTAATAAAATAAAA TAGACAATTATAAATAAGATT AAA ATTCTTAAATATAATTGACTA AATAAGCATATTATC TERM 1436 1128005 - 1128015 + r 72 -4 -5.34555 | GTAAATTTTTGATCT CATA AGT TATG TTTTTTATAATGTAA tnp 1129707 - 1128034 - | IS1634CB transposase TERM 1437 1129263 - 1129291 + g 91 -8.3 -5.04356 | opp_overlap 1129271, overlap 1129268 1129289 TTTCTTTTTTTGCTG TCTTATAAGTGTT AAA AACACTTATTGGA TTTTTAATTCTTTGA TERM 1438 1129268 - 1129286 + g 79 -9 -3.48824 | opp_overlap 1129271, overlap 1129263 TTTTTTGCTGTCTTA TAAGTGTT AAA AACACTTA TTGGATTTTTAATTC TERM 1439 1129802 - 1129768 - R 70 -3.8 -5.24129 | gap 2, overlap 1129749 1129748 1129770 TTTTTTTATAAAAAA TATAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA-A GTGGGAAACGTAGGA TERM 1440 1129801 - 1129770 - R 84 -8.9 -4.25873 | gap 1, overlap 1129749 1129748 1129768 TTTTTATAAAAAATA TAGCCGCTGAAAAC TGAGT GTTTTC-GCGACTA AGTGGGAAACGTAGG TERM 1441 1129898 - 1129854 - R 76 -4.5 -5.27476 | CTTAATAAAATAAAA TAGACAATTATAAATAAGATT AAA ATTCTTAAATATAATTGACTA AATAAGCATATTATT galU 1130805 - 1129933 - | UTP-glucose-1-phosphate uridylyltransferase MSC_0991 1131173 - 1131015 - | hypothetical protein MSC_0992 1131553 - 1131212 - | hypothetical protein epsG 1131803 - 1133176 + | glycosyltransferase TERM 1442 1133260 - 1133250 - f 80 -2.6 -6.09888 | TTGTAATAAAAAAAA TTAA ATA TTAA TTAGACTTTAGTTTT TERM 1443 1133346 - 1133320 - f 79 -5.2 -5.54338 | opp_overlap 1133328 TAATTAAAATAAAAA GTCAAAAAGTTA GTA TAACTGATTGAC AATATTAAATTAATT TERM 1444 1133364 - 1133378 + F 100 -8.6 -5.5074 | opp_overlap 1133364 1133361 TATTAAATTAATTTA GACACT TTA AGTGTC TTTTTTGTTAGATTA rplK 1133534 - 1133962 + | 50S ribosomal protein L11 rplA 1133962 - 1134642 + | 50S ribosomal protein L1 TERM 1445 1134721 - 1134668 - f 100 -22.3 -3.74345 | opp_overlap 1134668 1134679, overlap 1134679 ATTCATATATGTAAA CTAGGACAAAATATTTGAGCAAACA TAAT TATTTGTTCAAATATTTTGTCCTAG TTTTATAAGGGTGTG TERM 1446 1134668 - 1134721 + F 100 -22.3 -4.39426 | opp_overlap 1134668 1134679, overlap 1134679 ATTCATATATGTAAA CTAGGACAAAATATTTGAGCAAACA TAAT TATTTGTTCAAATATTTTGTCCTAG TTTTATAAGGGTGTG TERM 1447 1134710 - 1134679 - f 75 -6.8 -4.52703 | opp_overlap 1134668 1134679, overlap 1134668 TAAACTAGGACAAAA TATTTGAGCAAACA TAAT TATTTGTTCAAATA TTTTGTCCTAGTTTT TERM 1448 1134679 - 1134710 + F 75 -6.8 -4.53607 | opp_overlap 1134679 1134668, overlap 1134668 TAAACTAGGACAAAA TATTTGAGCAAACA TAAT TATTTGTTCAAATA TTTTGTCCTAGTTTT TERM 1449 1134889 - 1134906 + F 73 -5.7 -4.86001 | opp_overlap 1134888, overlap 1134905 GTTTAATTAATCTAT TATTAAG TTTT CTTAATA TTTTTATGAAATACT MSC_0996 1135005 - 1135178 + | hypothetical protein MSC_0997 1135301 - 1136275 + | transglutaminase MSC_0998 1136432 - 1137118 + | hypothetical protein TERM 1450 1137229 - 1137263 + TF 90 -7.8 -5.03994 | overlap 1137244 AAAAAATCCCCCGAA CCCCATATTCCGGACT AAA AATCCAGGAAATGGGG TTTTTATATGTCCAA TERM 1451 1138131 - 1138112 - Tf 72 -7.9 -3.53055 | opp_overlap 1138114, overlap 1138110 AAAAAATAGACAATA CAGTTCC TATAAG GGAACTG TTGGAAAAATTGCTG TERM 1452 1138659 - 1138615 - Tf 84 -5.1 -5.70761 | opp_overlap 1138616 1138619 1138621, overlap 1138616 1138621 AAAATAAAAGAAAAA TTAAAAGGATTGTCTGCTGTA CAA TTCAGAAAACAATCCTGTTAT GATATTGAAAATTTT TERM 1453 1138658 - 1138616 - Tf 78 -8.6 -3.96966 | opp_overlap 1138616 1138619 1138621, overlap 1138615 1138621 AAATAAAAGAAAAAT TAAAAGGATTGTCTGCTGTA CAA TTCAGAAAACAATCCTGTTA TGATATTGAAAATTT TERM 1454 1138653 - 1138621 - Tf 88 -8.5 -4.88326 | opp_overlap 1138621 1138619 1138616, overlap 1138616 1138615 AAAGAAAAATTAAAA GGATTGTCTGCTGTA CAA TTCAGAAAACAATCC TGTTATGATATTGAA MSC_1002 1139065 - 1138829 - | hypothetical protein lpp 1138793 - 1138999 + | prolipoprotein TERM 1455 1139580 - 1139614 + FH 70 -3.8 -5.24129 | gap 2, overlap 1139581 1139610 1139611 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTATAAAAAAA TERM 1456 1139581 - 1139612 + FH 84 -8.9 -4.25873 | gap 1, overlap 1139580 1139610 1139611 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTATAAAAA TERM 1457 1140119 - 1140091 - g 91 -8.3 -5.04356 | opp_overlap 1140099, overlap 1140081 1140096 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1458 1140114 - 1140096 - g 79 -9 -3.48824 | opp_overlap 1140099, overlap 1140091 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 1139675 - 1141348 + | IS1634BG transposase TERM 1459 1141377 - 1141367 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC MSC_1004 1141850 - 1142335 + | hypothetical protein TERM 1460 1142803 - 1142831 + F 100 -11.2 -5.64873 | opp_overlap 1142802 1142803 TATACTAAACAAATT GCAAGATTTTGA TATTT TCAAGATCTTGC TTTTTTCTTGTTAAA TERM 1461 1142831 - 1142803 - f 72 -9 -2.5814 | opp_overlap 1142803, overlap 1142802 TATACTAAACAAATT GCAAGATTTTGA TATTT TCAAGATCTTGC TTTTTTCTTGTTAAA TERM 1462 1142935 - 1142962 + F 79 -10.2 -2.59431 | opp_overlap 1142927 1142940 1142942, overlap 1142932 1142938 1142938 TCAAAAATATATTGA CATTATATATAT ATAT ATATATATAATG TGCCTTATAAAAAGA TERM 1463 1143848 - 1143832 - g 75 -6.7 -4.43911 | AAATTTTAACCAAAA TATTTCA AAA TGAAATA CTAAAAATGTAAAAA lpp 1143005 - 1144240 + | putative variable surface prolipoprotein TERM 1464 1144475 - 1144488 + F 86 -3.9 -6.14618 | overlap 1144480 ACCGAGGAAAAGACT TGTTT TAAA AAACA TTTTTTTGTTTTGTC TERM 1465 1144503 - 1144528 + F 100 -7.7 -5.95449 | gap 1 ATTTTTTTGTTTTGT CCTTGGTTTAGT GTT ACTAG-CCAAGG TTTTTTATTTTATTT rplJ 1144562 - 1145059 + | 50S ribosomal protein L10 TERM 1466 1145461 - 1145486 + G 72 -7.7 -3.62096 | opp_overlap 1145461 1145456 1145455, overlap 1145465 1145483 GAAATGAAAGCTAAA TTAGTTGAAGC TGGA GCTTCAATTGA TTTAAAATAATCAAA TERM 1467 1145465 - 1145482 + G 75 -8.5 -3.53298 | opp_overlap 1145461 1145456 1145455, overlap 1145461 TGAAAGCTAAATTAG TTGAAGC TGGA GCTTCAA TTGATTTAAAATAAT rplL 1145128 - 1145496 + | 50S ribosomal protein L7/L12 TERM 1468 1145521 - 1145538 + F 87 -7 -5.14985 | opp_overlap 1145521 TGAATAATTTTTAAA CTCACC ATAATG GGTGAG TTTTTGTGTGTTTAA TERM 1469 1146637 - 1146655 + F 77 -7.6 -4.183 | opp_overlap 1146636 ATACTAAAAACCTAT CTTTTAAT AAC ATTAAAAG TTTATTAACAATTAA TERM 1470 1146782 - 1146809 + F 78 -10.2 -2.55351 | opp_overlap 1146786 1146799, overlap 1146781 1146786 ATACGTATTAGTTGA TAAATATTTAGA AAAA TCTAAATATTTA GTTAATATGAAAGGA TERM 1471 1147819 - 1147805 - g 73 -2.8 -5.68039 | AAATTTATAAAAAAA TTACAC AAG GTGAAA CTGCAACTAGTGAAG TERM 1472 1150429 - 1150415 - g 78 -4.2 -5.50499 | opp_overlap 1150419 TTAGATCTAAAAAAA TTCCTG AAC CTGGAA TTCCAGAATCATTTA rpoB 1146832 - 1150707 + | DNA-directed RNA polymerase subunit beta TERM 1473 1151299 - 1151283 - g 73 -2.3 -5.77988 | overlap 1151284 AGAGACACAAAAAAA GCTAATA GAT TATTAGA AGAATTAAAAAATAC rpoC 1150719 - 1154486 + | DNA-directed RNA polymerase beta' chain TERM 1474 1154545 - 1154589 + F 87 -5.9 -5.64321 | opp_overlap 1154546 1154549 1154551, overlap 1154546 1154551 AAATTTTTCAATATT ATAACAGGATTGTTTTCTG AATTGCA CAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 1475 1154546 - 1154588 + F 86 -9.4 -3.94933 | opp_overlap 1154546 1154549 1154551, overlap 1154545 1154551 AATTTTTCAATATTA TAACAGGATTGTTTTCTG AATTGCA CAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 1476 1154551 - 1154583 + F 95 -9.3 -4.88326 | opp_overlap 1154551 1154549 1154546, overlap 1154546 1154545 TTCAATATTATAACA GGATTGTTTTCTG AATTGCA CAGGAGACAATCC TTTTAATTTTTCTTT TERM 1477 1154989 - 1155023 + F 75 -3.8 -5.60993 | gap 2, overlap 1154990 1155019 1155020 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 1478 1154990 - 1155021 + F 86 -8.9 -4.45201 | gap 1, overlap 1154989 1155019 1155020 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 1479 1155529 - 1155501 - g 91 -8.3 -5.04356 | opp_overlap 1155509, overlap 1155491 1155506 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1480 1155524 - 1155506 - g 79 -9 -3.48824 | opp_overlap 1155509, overlap 1155501 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 1155085 - 1156758 + | IS1634BX transposase TERM 1481 1156787 - 1156777 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1482 1156908 - 1156878 - T 79 -10 -2.69639 | opp_overlap 1156878, overlap 1156877 1156876 AAAACCAATAAAAGC TCATAAAATACTTC CGT AAAGCATTTTATGA TTTTGCGATCATTTT TERM 1483 1156878 - 1156908 + T 73 -7.1 -4.18697 | opp_overlap 1156878 1156877 1156876 AAAACCAATAAAAGC TCATAAAATACTT CCGTA AAGCATTTTATGA TTTTGCGATCATTTT TERM 1484 1157109 - 1157094 - T 91 -4.7 -6.11229 | opp_overlap 1157094 AGCAAAATAAAAAAA GCAAC CATATC GTTGC TAAATTAATTTTTAT MSC_1012 1157328 - 1157140 - | hypothetical protein MSC_1013 1157599 - 1157342 - | hypothetical protein MSC_1014 1157748 - 1157599 - | hypothetical protein TERM 1485 1157802 - 1157787 - R 87 -6.2 -5.66338 | opp_overlap 1157787 1157800, overlap 1157791 1157800 1157801 AAACATAACAAAAAA CAAGTT ATAA AACTTG TTTTACAATAAAACT asnA 1158785 - 1157805 - | asparagine synthetase AsnA MSC_1016 1158990 - 1159751 + | hypothetical protein TERM 1486 1159755 - 1159739 - T 70 -3.8 -5.10767 | TATCGAATATAAAAA TACATT TTCTT AATGTA ATAAATAAATCACAT TERM 1487 1159938 - 1159974 + T 100 -8.3 -5.60993 | opp_overlap 1159944 TTAATAATAAATTCT CAAAAAGCAACAT CAAAGACGTCT ATGTTGCTTTTTG TTTTTTTATACACAA TERM 1488 1160012 - 1159995 - T 87 -6.3 -5.76633 | opp_overlap 1159995 TTATACACAAAAAAA GAACTGC TATA GCAATTC TTAATTATCGATATT gidA 1161902 - 1160013 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1489 1162036 - 1162017 - R 100 -9.4 -5.8901 | ATAGAAAATAAAAAA GTTCAACA TTTG TGTTGAAC TCAGGTTATTAATTA MSC_1018 1163627 - 1162053 - | proton/glutamate symporter nox 1165062 - 1163647 - | NADH oxidase pncA 1165209 - 1165709 + | pyrazinamidase/nicotinamidase lppQ 1165902 - 1167239 + | prolipoprotein Q TERM 1490 1167312 - 1167361 + F 82 -5.4 -5.60993 | opp_overlap 1167314 1167319 1167326, overlap 1167314 AATTTAATTTTTATA TATTTAATTAAAAACTCATTTG CTCCAA TAAATGAGTTTTTTATTAGAAA TTTTTTTGTAAAGAA MSC_1022 1167548 - 1168000 + | hypothetical protein TERM 1491 1168389 - 1168361 - T 82 -10.5 -2.86667 | opp_overlap 1168368, overlap 1168368 TAAAAAATTAAATAG TAAAAAAGGTTGT TAA ACAACCTTTTTTT AATGATTATTATCAT TERM 1492 1168368 - 1168382 + T 100 -8.6 -5.58074 | opp_overlap 1168361 1168368 TTAAATAGTAAAAAA GGTTGT TAA ACAACC TTTTTTTAATGATTA TERM 1493 1168382 - 1168368 - T 100 -8.6 -5.32699 | opp_overlap 1168368, overlap 1168361 TTAAATAGTAAAAAA GGTTGT TAA ACAACC TTTTTTTAATGATTA MSC_1023 1168606 - 1168388 - | hypothetical protein MSC_1024 1169130 - 1168837 - | hypothetical protein MSC_1025 1170358 - 1169582 - | hypothetical protein TERM 1494 1169980 - 1170006 + g 77 -3.2 -5.67967 | GTTGTTCTGCACTTT TTATTTCAGT TTCTTTT ATTGAAATAA TTTTTTTATCATCAT MSC_1026 1171786 - 1170368 - | hypothetical protein TERM 1495 1170719 - 1170732 + g 70 -3.9 -5.1356 | opp_overlap 1170719 AATTTTCTTAGATGA TGAAT TTAA ATTCA TTTTTATTAGTGAAA TERM 1496 1171075 - 1171095 + g 95 -9.9 -4.33417 | ACAACTGATCTTTTT CTTTAGTTA ACA TAACTAAAG TTTGTTCTAGGTCAG MSC_1027 1172314 - 1171856 - | hypothetical protein TERM 1497 1172613 - 1172584 - R 86 -8.8 -4.40882 | gap 1, opp_overlap 1172591, overlap 1172591 TAGAAAGTAAAATAA CAAAAAAGGTTGG TAATT CCAACC-TTTTTG AATTTAAAAATTATA TERM 1498 1172591 - 1172607 + r 86 -8 -4.81249 | opp_overlap 1172584 1172591 TAAAATAACAAAAAA GGTTGG TAATT CCAACC TTTTTGAATTTAAAA TERM 1499 1172607 - 1172591 - R 100 -8 -5.77677 | opp_overlap 1172591, overlap 1172584 TAAAATAACAAAAAA GGTTGG TAATT CCAACC TTTTTGAATTTAAAA MSC_1028 1172839 - 1172630 - | hypothetical protein MSC_1029 1172968 - 1172840 - | hypothetical protein MSC_1030 1173030 - 1173140 + | hypothetical protein TERM 1500 1173397 - 1173415 + F 100 -7.5 -5.82388 | opp_overlap 1173381 1173396 1173399 AAATTTTCTTAAATT TAGAGCT AAAAA AGCTCTA TTTTTTTTCCAATTT TERM 1501 1174366 - 1174338 - g 73 -5.5 -4.8543 | opp_overlap 1174347 1174350, overlap 1174358 TAATCCCTATAAAAA TAAATCATACTTT TAA AAAGTTTAATTTA AAATCTGGATTTAAT tnp 1173518 - 1174930 + | transposase ISMmy1A TERM 1502 1174955 - 1174984 + F 78 -9.7 -3.0497 | opp_overlap 1174957 1174959 1174961 1174963 1174965, overlap 1174955 1174955 1174955 1174955 TTGGGAATTTTTTAA TATATATATATAT ATAT ATATATATATATA TATTCAAGCTAATGT TERM 1503 1174955 - 1174982 + F 74 -8.8 -3.08073 | opp_overlap 1174957 1174959 1174961 1174963 1174965, overlap 1174955 1174955 1174955 1174955 TTGGGAATTTTTTAA TATATATATATA TATA TATATATATATA TATATTCAAGCTAAT TERM 1504 1174986 - 1174957 - f 78 -9.7 -3.04322 | opp_overlap 1174955 1174955 1174955 1174955 1174955, overlap 1174959 1174961 1174963 1174965 GGGAATTTTTTAATA TATATATATATAT ATAT ATATATATATATA TTCAAGCTAATGTTC TERM 1505 1174986 - 1174959 - f 74 -8.8 -3.0782 | opp_overlap 1174955 1174955 1174955 1174955 1174955, overlap 1174957 1174961 1174963 1174965 GAATTTTTTAATATA TATATATATATA TATA TATATATATATA TTCAAGCTAATGTTC TERM 1506 1175114 - 1175148 + F 75 -3.8 -5.60993 | gap 2, overlap 1175115 1175144 1175145 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 1507 1175115 - 1175146 + F 86 -8.9 -4.45201 | gap 1, overlap 1175114 1175144 1175145 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 1508 1175654 - 1175626 - f 91 -8.3 -5.04356 | opp_overlap 1175634, overlap 1175616 1175631 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAGAAAA TERM 1509 1175649 - 1175631 - f 79 -9 -3.48824 | opp_overlap 1175634, overlap 1175626 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 1510 1176911 - 1176901 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1511 1177343 - 1177373 + F 89 -9.2 -4.24149 | opp_overlap 1177348, overlap 1177348 GAAGGTTAGTTATCA AAAAACAGACTTGT CGA ATAAGTCTGTTTTA TTATTGTTTTAGTAA TERM 1512 1177368 - 1177348 - f 83 -6.9 -5.1675 | opp_overlap 1177348 1177343 TTAGTTATCAAAAAA CAGACTTGT CGA ATAAGTCTG TTTTATTATTGTTTT TERM 1513 1177348 - 1177368 + F 100 -9.1 -5.06116 | opp_overlap 1177348, overlap 1177343 TTAGTTATCAAAAAA CAGACTTGT CGA ATAAGTCTG TTTTATTATTGTTTT TERM 1514 1177651 - 1177623 - f 75 -9 -3.21241 | opp_overlap 1177623, overlap 1177621 1177620 ATACTAAACAAATTA GCAAGATTTTGA TATTT TCAAGATCTTGC TTTTTTCTTGTTAAA TERM 1515 1177623 - 1177651 + F 100 -11.2 -5.64873 | opp_overlap 1177623 1177621 1177620 ATACTAAACAAATTA GCAAGATTTTGA TATTT TCAAGATCTTGC TTTTTTCTTGTTAAA lpp 1177814 - 1178056 + | putative variable prolipoprotein MSC_1034 1177878 - 1178240 + | hypothetical protein TERM 1516 1178302 - 1178346 + F 87 -5.9 -5.64321 | opp_overlap 1178303 1178306 1178308, overlap 1178303 1178308 AAATTTTTCAATATT ATAACAGGATTGTTTTCTG AATTGCA CAGGAGACAATCCTTTTAA TTTTTCTTTTATTCT TERM 1517 1178303 - 1178345 + F 86 -9.4 -3.94933 | opp_overlap 1178303 1178306 1178308, overlap 1178302 1178308 AATTTTTCAATATTA TAACAGGATTGTTTTCTG AATTGCA CAGGAGACAATCCTTTTA ATTTTTCTTTTATTC TERM 1518 1178308 - 1178340 + F 95 -9.3 -4.88326 | opp_overlap 1178308 1178306 1178303, overlap 1178303 1178302 TTCAATATTATAACA GGATTGTTTTCTG AATTGCA CAGGAGACAATCC TTTTAATTTTTCTTT TERM 1519 1178746 - 1178780 + F 75 -3.8 -5.60993 | gap 2, overlap 1178747 1178776 1178777 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 1520 1178747 - 1178778 + F 86 -8.9 -4.45201 | gap 1, overlap 1178746 1178776 1178777 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 1521 1179286 - 1179258 - g 91 -8.3 -5.04356 | opp_overlap 1179266, overlap 1179248 1179263 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAAGAAA TERM 1522 1179281 - 1179263 - g 79 -9 -3.48824 | opp_overlap 1179266, overlap 1179258 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA tnp 1178842 - 1180515 + | IS1634CM transposase TERM 1523 1180544 - 1180534 - T 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1524 1180665 - 1180635 - T 79 -10 -2.69639 | opp_overlap 1180635, overlap 1180634 1180633 AAAACCAATAAAAGC TCATAAAATACTTC CGT AAAGCATTTTATGA TTTTGCGATCATTTT TERM 1525 1180635 - 1180665 + T 73 -7.1 -4.18697 | opp_overlap 1180635 1180634 1180633 AAAACCAATAAAAGC TCATAAAATACTT CCGTA AAGCATTTTATGA TTTTGCGATCATTTT TERM 1526 1180866 - 1180851 - T 91 -4.7 -6.11229 | opp_overlap 1180851 AGCAAAATAAAAAAA GCAAC CATATC GTTGC TAAATTAATTTTTAT MSC_1037 1181085 - 1180897 - | hypothetical protein MSC_1038 1181356 - 1181099 - | hypothetical protein MSC_1039 1181505 - 1181356 - | hypothetical protein TERM 1527 1181559 - 1181544 - R 87 -6.2 -5.66338 | opp_overlap 1181544 1181557, overlap 1181548 1181557 1181558 AAACATAACAAAAAA CAAGTT ATAA AACTTG TTTTACAATAAAACT asnA 1182542 - 1181562 - | asparagine synthetase AsnA MSC_1041 1182747 - 1183508 + | hypothetical protein TERM 1528 1183512 - 1183496 - T 70 -3.8 -5.10767 | TATCGAATATAAAAA TACATT TTCTT AATGTA ATAAATAAATCACAT TERM 1529 1183695 - 1183731 + T 100 -8.3 -5.60993 | opp_overlap 1183701 TTAATAATAAATTCT CAAAAAGCAACAT CAAAGACGTCT ATGTTGCTTTTTG TTTTTTTATACACAA TERM 1530 1183769 - 1183752 - T 87 -6.3 -5.76633 | opp_overlap 1183752 TTATACACAAAAAAA GAACTGC TATA GCAATTC TTAATTATCGATATT gidA 1185659 - 1183770 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1531 1185793 - 1185774 - R 100 -9.4 -5.8901 | ATAGAAAATAAAAAA GTTCAACA TTTG TGTTGAAC TCAGGTTATTAATTA MSC_1043 1187384 - 1185810 - | proton/glutamate symporter nox 1188819 - 1187404 - | NADH oxidase pncA 1188966 - 1189466 + | pyrazinamidase/nicotinamidase lppQ 1189659 - 1190996 + | prolipoprotein Q TERM 1532 1191069 - 1191118 + F 82 -5.4 -5.60993 | opp_overlap 1191071 1191076 1191083, overlap 1191071 AATTTAATTTTTATA TATTTAATTAAAAACTCATTTG CTCCAA TAAATGAGTTTTTTATTAGAAA TTTTTTTGTAAAGAA MSC_1047 1191305 - 1191757 + | hypothetical protein TERM 1533 1192146 - 1192118 - T 82 -10.5 -2.86667 | opp_overlap 1192125, overlap 1192125 TAAAAAATTAAATAG TAAAAAAGGTTGT TAA ACAACCTTTTTTT AATGATTATTATCAT TERM 1534 1192125 - 1192139 + T 100 -8.6 -5.58074 | opp_overlap 1192125 1192118 TTAAATAGTAAAAAA GGTTGT TAA ACAACC TTTTTTTAATGATTA TERM 1535 1192139 - 1192125 - T 100 -8.6 -5.32699 | opp_overlap 1192125, overlap 1192118 TTAAATAGTAAAAAA GGTTGT TAA ACAACC TTTTTTTAATGATTA MSC_1048 1192363 - 1192145 - | hypothetical protein MSC_1049 1192887 - 1192594 - | hypothetical protein MSC_1050 1194115 - 1193339 - | hypothetical protein TERM 1536 1193737 - 1193763 + g 77 -3.2 -5.67967 | GTTGTTCTGCACTTT TTATTTCAGT TTCTTTT ATTGAAATAA TTTTTTTATCATCAT MSC_1051 1195543 - 1194125 - | hypothetical protein TERM 1537 1194476 - 1194489 + g 70 -3.9 -5.1356 | opp_overlap 1194476 AATTTTCTTAGATGA TGAAT TTAA ATTCA TTTTTATTAGTGAAA TERM 1538 1194832 - 1194852 + g 95 -9.9 -4.33417 | ACAACTGATCTTTTT CTTTAGTTA ACA TAACTAAAG TTTGTTCTAGGTCAG MSC_1052 1196071 - 1195613 - | hypothetical protein TERM 1539 1196370 - 1196341 - R 86 -8.8 -4.40882 | gap 1, opp_overlap 1196348, overlap 1196348 TAGAAAGTAAAATAA CAAAAAAGGTTGG TAATT CCAACC-TTTTTG AATTTAAAAATTATA TERM 1540 1196364 - 1196348 - R 100 -8 -5.77677 | opp_overlap 1196348, overlap 1196341 TAAAATAACAAAAAA GGTTGG TAATT CCAACC TTTTTGAATTTAAAA TERM 1541 1196348 - 1196364 + r 86 -8 -4.81249 | opp_overlap 1196341 1196348 TAAAATAACAAAAAA GGTTGG TAATT CCAACC TTTTTGAATTTAAAA MSC_1053 1196596 - 1196387 - | hypothetical protein MSC_1054 1196725 - 1196597 - | hypothetical protein MSC_1055 1196787 - 1196897 + | hypothetical protein TERM 1542 1197154 - 1197172 + F 100 -7.5 -5.82388 | opp_overlap 1197138 1197153 1197156 AAATTTTCTTAAATT TAGAGCT AAAAA AGCTCTA TTTTTTTTCCAATTT TERM 1543 1198123 - 1198095 - g 73 -5.5 -4.8543 | opp_overlap 1198104 1198107, overlap 1198115 TAATCCCTATAAAAA TAAATCATACTTT TAA AAAGTTTAATTTA AAATCTGGATTTAAT tnp 1197275 - 1198687 + | transposase ISMmy1I TERM 1544 1198712 - 1198741 + F 78 -9.7 -3.10895 | opp_overlap 1198714 1198716 1198718 1198720 1198722, overlap 1198712 1198712 1198712 1198712 TTGGGAATTTTTTAA TATATATATATAT ATAT ATATATATATATA TATATATATATTCAA TERM 1545 1198712 - 1198743 + F 85 -10.6 -3.10493 | opp_overlap 1198714 1198716 1198718 1198720 1198722, overlap 1198712 1198712 1198712 1198712 TTGGGAATTTTTTAA TATATATATATATA TATA TATATATATATATA TATATATATTCAAGC TERM 1546 1198712 - 1198745 + F 90 -11.5 -3.09749 | opp_overlap 1198714 1198716 1198718 1198720 1198722, overlap 1198712 1198712 1198712 1198712 TTGGGAATTTTTTAA TATATATATATATAT ATAT ATATATATATATATA TATATATTCAAGCTA TERM 1547 1198712 - 1198747 + F 90 -12.4 -3.08073 | opp_overlap 1198714 1198716 1198718 1198720 1198722, overlap 1198712 1198712 1198712 1198712 TTGGGAATTTTTTAA TATATATATATATATA TATA TATATATATATATATA TATATTCAAGCTAAT TERM 1548 1198712 - 1198749 + F 95 -13.3 -3.0497 | opp_overlap 1198714 1198716 1198718 1198720 1198722, overlap 1198712 1198712 1198712 1198712 TTGGGAATTTTTTAA TATATATATATATATAT ATAT ATATATATATATATATA TATTCAAGCTAATGT TERM 1549 1198751 - 1198714 - f 95 -13.3 -3.04322 | opp_overlap 1198712 1198712 1198712 1198712 1198712, overlap 1198716 1198718 1198720 1198722 GGGAATTTTTTAATA TATATATATATATATAT ATAT ATATATATATATATATA TTCAAGCTAATGTTC TERM 1550 1198751 - 1198716 - f 90 -12.4 -3.0782 | opp_overlap 1198712 1198712 1198712 1198712 1198712, overlap 1198714 1198718 1198720 1198722 GAATTTTTTAATATA TATATATATATATATA TATA TATATATATATATATA TTCAAGCTAATGTTC TERM 1551 1198751 - 1198718 - f 90 -11.5 -3.09452 | opp_overlap 1198712 1198712 1198712 1198712 1198712, overlap 1198714 1198716 1198720 1198722 ATTTTTTAATATATA TATATATATATATAT ATAT ATATATATATATATA TTCAAGCTAATGTTC TERM 1552 1198751 - 1198720 - f 85 -10.6 -3.10493 | opp_overlap 1198712 1198712 1198712 1198712 1198712, overlap 1198714 1198716 1198718 1198722 TTTTTAATATATATA TATATATATATATA TATA TATATATATATATA TTCAAGCTAATGTTC TERM 1553 1198751 - 1198722 - f 78 -9.7 -3.10895 | opp_overlap 1198712 1198712 1198712 1198712 1198712, overlap 1198714 1198716 1198718 1198720 TTTAATATATATATA TATATATATATAT ATAT ATATATATATATA TTCAAGCTAATGTTC TERM 1554 1198879 - 1198913 + F 75 -3.8 -5.60993 | gap 2, overlap 1198880 1198909 1198910 TCCTACGTTTCCCAC T-TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTATA TTTTTTTATAAAAAA TERM 1555 1198880 - 1198911 + F 86 -8.9 -4.45201 | gap 1, overlap 1198879 1198909 1198910 CCTACGTTTCCCACT TAGTCGC-GAAAAC ACTCA GTTTTCAGCGGCTA TATTTTTTTATAAAA TERM 1556 1199419 - 1199391 - f 91 -8.3 -5.04356 | opp_overlap 1199399, overlap 1199381 1199396 TCAAAGAATTAAAAA TCCAATAAGTGTT TTT AACACTTATAAGA CAGCAAAAAAGAAAA TERM 1557 1199414 - 1199396 - f 79 -9 -3.48824 | opp_overlap 1199399, overlap 1199391 GAATTAAAAATCCAA TAAGTGTT TTT AACACTTA TAAGACAGCAAAAAA TERM 1558 1200676 - 1200666 - f 72 -4 -5.34555 | TTACATTATAAAAAA CATA ACT TATG AGATCAAAAATTTAC TERM 1559 1201108 - 1201138 + F 89 -9.2 -4.24149 | opp_overlap 1201113, overlap 1201113 GAAGGTTAGTTATCA AAAAACAGACTTGT CGA ATAAGTCTGTTTTA TTATTGTTTTAGTAA TERM 1560 1201133 - 1201113 - f 83 -6.9 -5.1675 | opp_overlap 1201108 1201113 TTAGTTATCAAAAAA CAGACTTGT CGA ATAAGTCTG TTTTATTATTGTTTT TERM 1561 1201113 - 1201133 + F 100 -9.1 -5.06116 | opp_overlap 1201113, overlap 1201108 TTAGTTATCAAAAAA CAGACTTGT CGA ATAAGTCTG TTTTATTATTGTTTT TERM 1562 1201388 - 1201416 + F 100 -11.2 -5.64873 | opp_overlap 1201386 1201385 1201388 ATACTAAACAAATTA GCAAGATTTTGA TATTT TCAAGATCTTGC TTTTTTCTTGTTAAA TERM 1563 1201416 - 1201388 - f 75 -9 -3.21241 | opp_overlap 1201388, overlap 1201386 1201385 ATACTAAACAAATTA GCAAGATTTTGA TATTT TCAAGATCTTGC TTTTTTCTTGTTAAA lpp 1201579 - 1202004 + | putative variable prolipoprotein TERM 1564 1202072 - 1202104 + T 70 -5 -4.88326 | opp_overlap 1202067 1202072, overlap 1202067 TTCAATATTATAACA GGATTGTTTTCT AAATTGTAC AGGAGACAATCC TTTTAATTTTTCTTT MSC_1061 1205782 - 1203542 - | hypothetical protein TERM 1565 1203704 - 1203714 + g 70 -2.6 -5.61277 | AACAACACCATATTT TAAA TTT TTTA TTTTCTTTTTTTCTA TERM 1566 1204695 - 1204707 + g 73 -3.5 -5.61913 | ACTTTTATATCTTTA TTATT TTT AATAA TTTTTTCTATTTCTT MSC_1062 1206830 - 1205772 - | AAA ATPase family protein TERM 1567 1205990 - 1206004 + g 78 -4.3 -5.60993 | TAATATTTTCCAGAG TTCCA GGATA TGGAA TTTTTTTATAAAGAG MSC_1063 1208184 - 1207018 - | prolipoprotein TERM 1568 1207964 - 1207950 - G 74 -5 -5.23765 | TAAATAACATAAAAA CTACTA ATT CAGTAG TACCTAAAATATCAT MSC_1064 1208967 - 1208233 - | LICA protein MSC_1065 1209743 - 1208949 - | hypothetical protein TERM 1569 1209799 - 1209814 + r 70 -7.6 -3.37556 | opp_overlap 1209799 TTAAATACAAAAAAA GAGAGT TTTA ACTCTC TTAAATTATTTTAAA TERM 1570 1209814 - 1209799 - R 100 -7.6 -5.88197 | opp_overlap 1209799 TTAAATACAAAAAAA GAGAGT TTTA ACTCTC TTAAATTATTTTAAA MSC_1066 1211010 - 1209820 - | putative inner membrane protein translocase component YidC TERM 1571 1210055 - 1210071 + g 82 -4.5 -5.77571 | GATTTTTTCTGTGCT TCAGTTA AAG TAATTGA TTTTTGTTTTTTCAT TERM 1572 1210218 - 1210202 - G 71 -7.3 -3.90112 | opp_overlap 1210202 GGTCCTTCAATTAAA GCAATTG GAC CAACTGC TGCTATTTTTAGTGC rnpA 1211357 - 1211028 - | ribonuclease P (protein C5) TERM 1573 1211124 - 1211142 + g 79 -9 -3.60336 | AATAATAACATCTTT TGAAATAG TTC CTATTTCA TTAATATTTTGTCTT rpmH 1211498 - 1211364 - | 50S ribosomal protein L34 TERM 1574 1211392 - 1211402 + g 71 -6.8 -4.08579 | CTAACTCTACCTTTA GCTC TAC GAGC TTTAATTACTTTTCT