TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.68984 %AT, 1008285 nt, 5970 terms. Intergenic: 0.699029 %AT, H2T: 657789 nt, 4463 terms; T2T: 244164 nt, 3146 terms; H2H: 244217 nt, 3753 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|148283997|ref|NC_009488.1| Orientia tsutsugamushi Boryong, complete genome (length 2127051) TERM 1 979 - 958 - g 71 -8.7 -2.92613 | overlap 955 961 CTGCAGTCCAAAGTA GAACAGCTG GCTA CAGCAGTTC CGCTAAAAGTATTAG dnaA 22 - 1431 + | chromosomal replication initiation protein TERM 2 2402 - 2383 - g 79 -6.6 -4.62336 | opp_overlap 2383 ATCGCAGTTGAAAAA TCTAAAAT AGTT ATTTTAGA TTTAGATCATCATGC dnaN 1450 - 2748 + | DNA polymerase III subunit beta TERM 3 3236 - 3224 - g 82 -4.8 -5.49234 | opp_overlap 3230 AGATTGAAGAAAAAA CTGG GGCAA CCAG GGTTGTTAATCCAGT TERM 4 3589 - 3601 + G 77 -7.7 -3.96327 | opp_overlap 3589 3588 GTACAGTATCAATAT GTTCC TAT GGAAC TTTCTCCTGAAGAAT virB8 2998 - 3678 + | type IV secretion system protein virB9 3698 - 4099 + | type IV secretion system protein virB10 4099 - 5628 + | type IV secretion system protein TERM 5 6097 - 6077 - g 74 -5.5 -4.8384 | overlap 6069 TAAACAATTCAAAAA TTTTTTGCA GCA TGCAATAAA GTCCAAAAAAAATAT virB11 5628 - 6617 + | type IV secretion system protein TERM 6 7718 - 7704 - g 95 -4.3 -6.4275 | TAAAAAGAAAAAAAA CAACA ATATA TGTTG GCTTAACACCTGATA virD4 6617 - 8389 + | type IV secretion system protein TERM 7 9800 - 9784 - f 71 -2.3 -5.38951 | overlap 9791 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA TERM 8 9844 - 9827 - f 75 -4.2 -5.30199 | AAAAAGCAAGAAAAA TCCTTT AACTAA AAAGGA TAAGAAGTAAAATAA rhp2 10369 - 12168 + | hypothetical protein OTBS_0012 16326 - 16150 - | hypothetical protein TERM 9 16670 - 16705 + r 100 -10.7 -4.11773 | opp_overlap 16670 TGTAACACACAAAAA GCAGTATTATATGAA ATATAG TCCATATAATACTGC TTTTAAACAATATTT TERM 10 16705 - 16670 - R 100 -12.9 -5.10064 | opp_overlap 16670 TGTAACACACAAAAA GCAGTATTATATGAA ATATAG TCCATATAATACTGC TTTTAAACAATATTT TERM 11 16768 - 16746 - R 79 -9.3 -3.524 | opp_overlap 16741 16746 16749, overlap 16764 TATTCATGTATAGAA GGATCTAAT TATAG ATTAGATCC TAGATTAGTATCATT TERM 12 16746 - 16768 + r 76 -10 -2.59458 | opp_overlap 16746 16764, overlap 16741 16749 TATTCATGTATAGAA GGATCTAATT ATA GATTAGATCC TAGATTAGTATCATT trxB1 19633 - 18683 - | thioredoxin reductase OTBS_0017 20692 - 19769 - | hypothetical protein tolB 22229 - 20868 - | protein precursor lpdA 23987 - 22560 - | dihydrolipoamide dehydrogenase TERM 13 22836 - 22824 - G 76 -6.3 -4.68994 | ACTATTAGCTAAAAA TGGAA ATT TTCCA ACAACATATTGAATA OTBS_0020 24882 - 24079 - | hypothetical protein TERM 14 25596 - 25578 - g 78 -6.8 -4.46212 | opp_overlap 25578 25581 CGCTGGATTACAAAA TAATGCTA GTA TAGCATCA TCTTCAGCTAGTGTA OTBS_0021 25057 - 25662 + | hypothetical protein TERM 15 25775 - 25743 - f 82 -4.3 -5.62045 | opp_overlap 25743 25747 AGATATAAGAAAAAA TTAAGTTTAAAGTTA GAA TAACTTGCAACTCAA TTAATCTAGTAAATA TERM 16 27174 - 27146 - f 86 -5.3 -5.52384 | TCTTCAGCAAAAAAA GGCTAAGCTAATC ATG GATGAGGTTAACC TCAAAATTAAAGAAC TERM 17 27422 - 27400 - f 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGACGAAAA CACTAAGCACCACAT TERM 18 29242 - 29226 - g 73 -8.1 -3.54574 | overlap 29235 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA tnD 28785 - 29750 + | transposase and inactivated derivative TERM 19 29744 - 29794 + F 85 -7.5 -4.93177 | opp_overlap 29748, overlap 29748 TGTTTCAATCCAGCA AAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTTTTA TERM 20 29790 - 29748 - f 87 -8.3 -4.77157 | opp_overlap 29748 29744 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 21 29748 - 29790 + F 90 -8.3 -4.91657 | opp_overlap 29748, overlap 29744 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 22 31857 - 31843 - g 78 -2.2 -5.75342 | opp_overlap 31845, overlap 31845 TGCCTGGAAAAAAAA CATAAA AAG TTTATA TTATTGTAGATCTAC nrdA 30179 - 31996 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 32019 - 33008 + | ribonucleotide-diphosphate reductase subunit beta TERM 23 33678 - 33660 - f 71 -4.6 -4.82901 | overlap 33662 TCCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 24 33767 - 33728 - f 89 -4.4 -5.9873 | opp_overlap 33749 33750, overlap 33750 TTACCAGAAAAAAAA TTTCATCCCAACCTGAAA GAAA TTTCAGGTCAACCTGAAA CTTTTTTTCAGGGAC TERM 25 33749 - 33768 + F 82 -5 -5.40072 | opp_overlap 33728 33750, overlap 33750 CCCAACCTGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTTCAGGGACA TERM 26 33767 - 33750 - f 85 -8.5 -4.46233 | opp_overlap 33749 33750, overlap 33728 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTTCAGGGAC TERM 27 33750 - 33767 + F 77 -8.5 -3.83561 | opp_overlap 33728 33750, overlap 33749 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTTCAGGGAC TERM 28 33818 - 33804 - f 85 -3.6 -5.77988 | AGATATATAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 29 33898 - 33872 - f 74 -5.4 -4.96523 | opp_overlap 33872 33875, overlap 33867 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACAAACTTC TERM 30 34051 - 34037 - f 74 -8.6 -3.3375 | overlap 34027 34035 ACTAACACCAGAAGA TGCAGT TGC ACTGCA ACACAAGTCTGATAG TERM 31 35240 - 35266 + F 74 -5.4 -4.96523 | opp_overlap 35252, overlap 35253 AAAATCTGTGCATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 32 35321 - 35335 + F 89 -3.6 -6.06529 | CTCACCTTCAGTAGA TCTAGA TAT TTTAGA TTTTTTTTATATATC TERM 33 35363 - 35398 + F 93 -11.4 -3.61517 | opp_overlap 35371 35372, overlap 35372 ATCTATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TTGTTGGAGCGAAAT TERM 34 35390 - 35371 - f 74 -5 -5.00884 | opp_overlap 35363 35372, overlap 35372 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATTGTTGG TERM 35 35389 - 35372 - f 74 -8.5 -3.60048 | opp_overlap 35363 35372, overlap 35371 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATTGTTG TERM 36 35372 - 35389 + F 85 -8.5 -4.62392 | opp_overlap 35372 35371, overlap 35363 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATTGTTG TERM 37 35663 - 35713 + F 100 -13.3 -4.84262 | opp_overlap 35667 35670 35673, overlap 35667 TGTTTCAATCCATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 38 35667 - 35709 + F 90 -8.3 -4.91657 | opp_overlap 35667 35670 35673, overlap 35663 TCAATCCATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 39 35709 - 35667 - f 79 -8.3 -3.99405 | opp_overlap 35667 35663, overlap 35670 35673 TCAATCCATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT tchA 38069 - 38404 + | hypothetical protein tchB 38952 - 39353 + | hypothetical protein traB 39465 - 39929 + | conjugative pilus assembly protein traV 39929 - 40219 + | conjugative transfer protein TERM 40 41304 - 41282 - T 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGATGAAAA CACTAAGCGCTACAT tnE 42480 - 41506 - | transposase and inactivated derivative TERM 41 42299 - 42321 + g 71 -8.5 -2.80816 | overlap 42304 ACTATTGATTCTTTT TTGGACGCT ATATC AGCGTCTAA TATCGTACCTAAAAA spoT1 43207 - 42602 - | spoT-like ppGpp hydrolase TERM 42 44668 - 44658 - R 75 -4 -5.2204 | CATAATTAATAAAAA TACA TCA TGTA GGTCTATTGTAATAT rhp2 48487 - 46763 - | hypothetical protein ybjR 49164 - 50264 + | N-acetylmuramoyl-L-alanine amidase ank2A1 51898 - 52512 + | ankyrin repeat-containing protein TERM 43 53739 - 53772 + F 72 -8.5 -3.24422 | opp_overlap 53733 53731 53744, overlap 53733 53737 53736 53744 TTCAAAATATTATTT TATAACATAACTATT ATAA AATAATTATGTTATA TACTTTTTGAAAATG TERM 44 54912 - 54900 - f 78 -3.4 -5.50499 | opp_overlap 54900 GTATACTTAAAAAAA TAGC AAACA GCTA TATGTATGGTTAGCT OTBS_0057 55786 - 56679 + | hypothetical protein TERM 45 59630 - 59615 - f 72 -4.8 -4.95167 | opp_overlap 59615 TAAGGAAGAAGAAAA GTTAAT TTTT ATTAAC TTCTACACTTTATAG TERM 46 59915 - 59904 - f 71 -3 -5.33785 | AATTAGTATAAAAAA TTTG ATAT CAAA AAAAGTATAATAGAC tchA 61808 - 62143 + | hypothetical protein tchB 62691 - 63092 + | hypothetical protein traB 63204 - 63668 + | conjugative pilus assembly protein traV 63668 - 63958 + | conjugative transfer protein trbC 64853 - 65236 + | conjugative transfer protein TERM 47 67034 - 67054 + F 70 -4.1 -4.90002 | opp_overlap 67036, overlap 67023 67025 67036 TTAATATATAATAAA TATATACAT TTT ATGTGTATG TTTTATTATATATTA TERM 48 68124 - 68110 - g 72 -3.6 -5.22006 | TGAGGAGAAGAAAAA GATATC AGA AATATC AGAGGTATTAGAAAA ank1D1 67088 - 68359 + | ankyrin repeat-containing protein tnE 73979 - 72912 - | transposase and inactivated derivative TERM 49 73450 - 73460 + g 74 -3.2 -5.48028 | ATAAAATGAACTAGT GCAG CAG TTGC TTTTCTTTTTATTTC TERM 50 73812 - 73794 - G 74 -6.8 -4.27316 | opp_overlap 73810, overlap 73810 TGTTTTAACTGAAAA TAGTACGT CAC ACATACTA CGGCGTAGATTTGCT TERM 51 74746 - 74730 - g 73 -8.1 -3.54574 | overlap 74739 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA tnD 74292 - 75254 + | transposase and inactivated derivative TERM 52 75248 - 75298 + F 100 -16.2 -4.84262 | opp_overlap 75252 75255 75258, overlap 75252 TGTTTCAATCTATCA GAAATAATAATTTTATAAAAAA GATGTAA TTTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 53 75252 - 75294 + F 100 -11.2 -4.91657 | opp_overlap 75252 75255 75258, overlap 75248 TCAATCTATCAGAAA TAATAATTTTATAAAAAA GATGTAA TTTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 54 75294 - 75252 - f 100 -11.2 -3.99405 | opp_overlap 75252 75248, overlap 75255 75258 TCAATCTATCAGAAA TAATAATTTTATAAAAAA GATGTAA TTTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 55 75291 - 75255 - f 81 -8.5 -4.11585 | opp_overlap 75252 75248, overlap 75252 75258 ATCTATCAGAAATAA TAATTTTATAAAAAA GATGTAA TTTTTTATAAAATTA TTATTTCTTTTCTTG TERM 56 77400 - 77380 - g 83 -10.5 -3.23692 | TATTAGTATTAGTAA TCCACAAGC AAG GCTTATGGA GGCTGTAGAATCTGG TERM 57 78253 - 78240 - g 70 -8.1 -3.12895 | overlap 78238 TTCCGGAGGAATATA TGGCC ATGT GGCCA GAGCAACTGCCGCCT ank1u1 76112 - 78367 + | ankyrin repeat-containing protein TERM 58 78672 - 78722 + F 100 -13.3 -4.93177 | opp_overlap 78676 78679 78682 TGTTTCAATCCATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTTTTA TERM 59 78718 - 78676 - f 79 -8.3 -3.99405 | opp_overlap 78672, overlap 78679 78682 TCAATCCATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 60 80604 - 80624 + F 100 -11.2 -4.2803 | TATCTTTATTATCCT TGAGCTGC TCTAT GCAGCTCA TTTTACCTTCGAATA TERM 61 83470 - 83444 - f 83 -3 -5.7946 | TCTCCAACAAAAAAA GCTAAGCTAATC ATG GATGAGGTTAAC CTCAAAATCAAAGAA TERM 62 83718 - 83696 - g 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGATGAAAA CACTAAGCGCTACAT traD_Ti 83456 - 83854 + | conjugative transfer protein TERM 63 84238 - 84226 - g 75 -4.9 -5.04868 | CCAAAGCAAACAAAA TGTAT TAT ATACA CAAGTAAGTTTTACT rhp4 83942 - 84520 + | hypothetical protein spoT2 85173 - 84598 - | spoT-like ppGpp hydrolase TERM 64 84697 - 84710 + g 71 -3.1 -5.16237 | TTGCTGAGTTTCAAT GACGA TTTT TTGTC TTTTTTCATAAGGTT TERM 65 84813 - 84830 + g 72 -2.7 -5.33848 | TATAAAATGTTTGAA TCATTTC TCCA GAACTGA TTTTTTGATTATCCT hkp3 86908 - 85307 - | putative signal transduction histidine kinase TERM 66 85464 - 85474 + g 71 -5.4 -4.68724 | opp_overlap 85462 85464 ACCAAGTCAAAATCA GCTA ATT TAGC TTTTATATTCCCTAA TERM 67 87082 - 87096 + r 86 -2.9 -6.09133 | TTTTTGTTATATTTA TGAAA TTTTT TTTCA TTTTTTTTTAAAATA rhp5 87972 - 87421 - | hypothetical protein TERM 68 88257 - 88276 + r 71 -2.2 -5.38348 | opp_overlap 88251 88270, overlap 88251 88268 88270 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT TERM 69 88403 - 88427 + r 71 -6.6 -3.95584 | AGCTTTAAGGCTTAT TTTCTACTAT AATTC ATAGTAGAGA TTTAATTAATCAAAA rhp6 89768 - 89265 - | putative ompA-like autotransporter tchD 93301 - 91751 - | hypothetical protein TERM 70 92526 - 92540 + g 74 -8.6 -3.25459 | overlap 92524 CTATCAGACTTGTGT TGCAGT GTA ACTGCA TCTTCTGGGGTTAGT TERM 71 92679 - 92705 + g 76 -5.4 -4.96523 | opp_overlap 92679 92691, overlap 92692 GAAGTCCGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 72 92759 - 92773 + g 84 -3.6 -5.77988 | CTCACCTTCAGTAGA TCTAGA TAT TTTAGA TTTTTTTATATATCT TERM 73 92827 - 92808 - G 75 -5 -5.00884 | opp_overlap 92809 92809, overlap 92794 92809 ATGTCCCTGAAAAAA GTTTCAGG TTCA CCTGAAAT TTCTTTCAGGTTGGA TERM 74 92809 - 92848 + g 85 -3.1 -5.9873 | opp_overlap 92794 92808 92809, overlap 92809 TGTCCCTGAAAAAAG TTTCAGGTTCA-CCTGAAA TTTC TTTCAGGTTGGAGC-GAAA TTTTTTTTCTGGTAA TERM 75 92826 - 92809 - G 77 -8.5 -3.60048 | opp_overlap 92809 92809, overlap 92794 92808 TGTCCCTGAAAAAAG TTTCAGG TTCA CCTGAAA TTTCTTTCAGGTTGG TERM 76 92809 - 92826 + g 88 -8.5 -4.46233 | opp_overlap 92794 92809 92808, overlap 92809 TGTCCCTGAAAAAAG TTTCAGG TTCA CCTGAAA TTTCTTTCAGGTTGG TERM 77 92898 - 92916 + g 70 -4.6 -4.82901 | overlap 92900 CCTTTTTTACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA TERM 78 93228 - 93243 + g 74 -7.6 -3.84027 | opp_overlap 93226 93224, overlap 93226 AAGTTATAAAATATT GTAGCA TTAT TGCTAC TATTATTTTTAATAA TERM 79 93524 - 93504 - H 75 -4.8 -5.07107 | TAAACTTCTAAAAAA TTTTCAGC GTTTT ACTGAAAA AGAAAAAAAGAAGAA TERM 80 93552 - 93534 - H 87 -2.4 -6.20267 | TGAAAAAGAAAAAAA GAAGAAAA AAT TGTCCTTC TACAACAAGGAAATT TERM 81 93607 - 93588 - H 90 -10.8 -3.65581 | opp_overlap 93596 ATCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT ank1C1 95039 - 95590 + | ankyrin repeat-containing protein TERM 82 99495 - 99525 + T 79 -9.1 -3.41325 | opp_overlap 99502, overlap 99497 99503 CTTTATCTATACTGG AATGCAAGGGCTA AAAGC TAGCCTTTGCATA TATTATTCCAGTATG TERM 83 99497 - 99523 + T 95 -11.7 -3.27158 | opp_overlap 99502, overlap 99495 99503 TTATCTATACTGGAA TGCAAGGGCTA AAAGC TAGCCTTTGCA TATATTATTCCAGTA rhp8 103890 - 99505 - | ompA-like, putative autotransporter TERM 84 99938 - 99912 - G 74 -9.6 -2.60054 | opp_overlap 99912, overlap 99911 TATTAAAGTACGAAT GTCTAATACCAA CAG TTGGTACTAAAC TTAGCTTCTTATTAT TERM 85 100124 - 100139 + g 75 -2.6 -5.5208 | opp_overlap 100123, overlap 100123 TATAAAGATAATAAG TAAACG TTAC TGTTTA TTTTTTCTATTCTGC TERM 86 100370 - 100380 + g 71 -5.4 -4.60258 | opp_overlap 100370 CCAGATGATACTATA TCTG ACA CAGA TTTGTTGTTTGATGC TERM 87 103615 - 103654 + g 73 -8 -3.41636 | gap 1, overlap 103616 AGTTGCATCGCTGGC ACCAGTTGCAGGAG-TAGT GCC ACTAGCTCCTTCAATTGGA TTACTTGGATTACTT TERM 88 103616 - 103653 + g 86 -11.5 -2.64258 | gap 1, overlap 103615 GTTGCATCGCTGGCA CCAGTTGCAGGAG-TAGT GCC ACTAGCTCCTTCAATTGG ATTACTTGGATTACT tpr1B1 106971 - 106687 - | TPR repeat-containing protein traN 107369 - 107875 + | conjugative transfer protein TERM 89 111021 - 111043 + F 75 -4.8 -5.06451 | opp_overlap 111024 GGATTCTATTAATAA TATGGGTCAG CAG CTGGCCAGTA TTTTTTACAATAATC tpr1B2 111862 - 112524 + | TPR repeat-containing protein TERM 90 113075 - 113052 - g 73 -8.2 -3.38674 | overlap 113051 AAAAGCGCTAAAAAG GCCTCGAAAA TCTG TTTTGGAGGC TTGCCATTAGTAAAG traD_F 112521 - 114278 + | conjugative transfer protein dapD 115368 - 114517 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 91 115535 - 115523 - g 72 -3.5 -5.29445 | GCCTAATAATAAAAA TTTAA GTT TTAAA AATATAAGAAAAATC OTBS_0116 115467 - 116111 + | hypothetical protein OTBS_0118 117750 - 117974 + | hypothetical protein TERM 92 118014 - 117972 - T 90 -8.3 -4.91657 | opp_overlap 117972 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA TERM 93 117972 - 118014 + T 87 -8.3 -4.77157 | opp_overlap 117972 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA tnD 118648 - 118052 - | transposase and inactivated derivative OTBS_0120 118842 - 118669 - | hypothetical protein tpr1A2 119287 - 119171 - | TPR repeat-containing protein TERM 94 119346 - 119360 + r 86 -2.9 -6.11019 | CACTTAATAGCTACA TCTTT AGTTA AAAGA TTTTTTTTGCTTTTT TERM 95 119387 - 119403 + r 71 -2.3 -5.38951 | opp_overlap 119387, overlap 119384 TTTTTTCTTTTATAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTBS_0123 121431 - 120181 - | hypothetical protein TERM 96 122070 - 122085 + r 71 -4.7 -4.75309 | opp_overlap 122070 TTAGAAATAATTGAA GCTAC AGATAG GTAGC TTTTATTGCCTTTGG dam2 122929 - 122333 - | site-specific DNA adenine methylase TERM 97 122647 - 122637 - G 70 -4 -5.04601 | TCTATAAATGAAAAA TATG TAG CATA AATTGATACACCATG TERM 98 123264 - 123254 - g 70 -4 -4.95758 | ATGATATTAGAAAAA GAAT TCG ATTC AGAAATAGAAATGAA TERM 99 124019 - 124002 - g 76 -8.5 -3.40565 | opp_overlap 123999 AAGCATTAAGATTAA GCTTAAC GTTT GTTAAGC TGATGCTTCAAGAAA hkp5 123239 - 124120 + | putative signal transduction histidine kinase TERM 100 124098 - 124132 + F 100 -9.4 -4.39571 | opp_overlap 124097 124100, overlap 124100 124104 CCATATTTCATATAC CAGTCAGCTTAGCTAA TTG TTAGCTAAGCTTGCTA TTTTAAATTTCTAAA TERM 101 124100 - 124130 + F 95 -12 -3.79633 | opp_overlap 124097 124100, overlap 124098 124104 ATATTTCATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 102 124130 - 124100 - f 76 -9.8 -2.69977 | opp_overlap 124100 124098 124104, overlap 124097 ATATTTCATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 103 124104 - 124126 + F 100 -13.6 -3.55453 | opp_overlap 124100 124097, overlap 124100 124098 TTCATATACCAGTCA GCTTAGCTAA TTG TTAGCTAAGC TTGCTATTTTAAATT TERM 104 126630 - 126652 + F 77 -7.8 -4.13767 | ATGTGGTGCTTAGTG TTTTCGTCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 105 126879 - 126905 + F 83 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA TERM 106 130616 - 130630 + G 74 -5.8 -4.64676 | opp_overlap 130615 130616 130618 GTTGCCAAAATATAG TATTTG CAA CAAATA TTTTATTAAAGATCA TERM 107 131179 - 131155 - g 84 -10.9 -3.06315 | opp_overlap 131153 GTAACATTTCTAATA CCAGTAAAACT GAT AGTTTTACTGA AGCTAAAGCTTTCAA OTBS_0135 130479 - 131486 + | hypothetical protein TERM 108 131879 - 131917 + F 80 -9.9 -3.27022 | opp_overlap 131877 131879, overlap 131887 AGGATGGACATAATA TAGCTAAGCTACTATAA AACAG TTATAATAGTTTAGCTA TTACTATGGACTAGA TERM 109 131917 - 131879 - f 80 -9.9 -3.33792 | opp_overlap 131879 131887, overlap 131877 AGGATGGACATAATA TAGCTAAGCTACTATAA AACAG TTATAATAGTTTAGCTA TTACTATGGACTAGA OTBS_0137 132097 - 132699 + | hypothetical protein TERM 110 132742 - 132721 - T 85 -8.1 -4.4195 | opp_overlap 132721 ATATAGCCTATAAAA GGAGAAATT ATTT AACTTCTCC TTTATATAAATTATA OTBS_0138 134185 - 132728 - | hypothetical protein OTBS_0139 134193 - 134357 + | hypothetical protein tpiA 134361 - 135110 + | triosephosphate isomerase secG 135116 - 135409 + | preprotein translocase subunit SecG TERM 111 135582 - 135570 - T 72 -6.3 -4.25283 | opp_overlap 135570 ACTTTGCTATTAAAA CCATA CAT TATGG TACATTCTTGACAGT TERM 112 135617 - 135639 + T 73 -5.7 -4.63542 | gap 1, opp_overlap 135615 135617, overlap 135620 135622 TATTTTACTAATATA CTCTACCACT ACTG AGTGGTA-AG TTTTTGAAGATTCTA lysK 137487 - 135907 - | lysyl-tRNA synthetase dsbB 137639 - 138187 + | disulfide bond formation protein TERM 113 138289 - 138277 - gf 72 -4.1 -5.05116 | TTATAAATAATAAAA TATGC AAA GCACA AATTATGTCTATGCT coq7 138150 - 138695 + | ubiquinone biosynthesis protein psd 138771 - 139463 + | phosphatidylserine decarboxylase TERM 114 139758 - 139768 + G 74 -5.4 -4.89562 | overlap 139747 GGAGCAGAGTTAGAC TCAC TTT GTGA TTTTGTTAATTTTGG pssA 139512 - 140288 + | CDP-diacylglycerol--serineO-phosphatidyltransferase TERM 115 140287 - 140318 + F 83 -7.6 -4.66609 | opp_overlap 140285 140289 140315, overlap 140289 CTAGAAGAATTAATT AATATTGAATATAA TGTA TTATATTCAATATC TTTTTAGATAAAATA TERM 116 140316 - 140289 - f 83 -10.2 -3.50854 | opp_overlap 140289 140287, overlap 140285 140315 AGAAGAATTAATTAA TATTGAATATAA TGTA TTATATTCAATA TCTTTTTAGATAAAA TERM 117 140289 - 140316 + F 93 -10.2 -3.94812 | opp_overlap 140285 140289 140315, overlap 140287 AGAAGAATTAATTAA TATTGAATATAA TGTA TTATATTCAATA TCTTTTTAGATAAAA mnhE 140335 - 140820 + | multisubunit Na+/H+ antiporter, MnhE subunit TERM 118 141954 - 141995 + G 71 -8.9 -2.55437 | opp_overlap 141958 141964, overlap 141964 AGTTTTTAGATTTGC CAAAGTTAAACTTAGTAGC ATCA GATACTAAGTTTAACAGTG ATATTCCTATTGATA TERM 119 141991 - 141958 - g 100 -12.7 -3.56643 | opp_overlap 141954 141964, overlap 141964 TTTAGATTTGCCAAA GTTAAACTTAGTAGC ATCA GATACTAAGTTTAAC AGTGATATTCCTATT TERM 120 143162 - 143142 - g 74 -6.9 -4.26188 | opp_overlap 143147, overlap 143145 CTGATATAGTCAAAA CGATATCTG CAA CAGATATTG AAATGCTAATTAGAA OTBS_0148 141101 - 143929 + | hypothetical protein OTBS_0149 145782 - 144106 - | hypothetical protein sucD 146729 - 145851 - | succinyl-CoA synthetase, alpha chain sucC 147904 - 146744 - | succinyl-CoA synthetase beta chain ubiH 149124 - 147961 - | 2-polyprenyl-6-methoxyphenol 4-hydroxylase TERM 121 148579 - 148568 - G 73 -4.4 -5.1101 | CCATTAGGCAAAAAA TGCT CAAC AGCA GTCCCGAAGTGTTGT OTBS_0153 150118 - 149534 - | hypothetical protein TERM 122 149983 - 149993 + g 70 -4 -4.98531 | CTTGTGCTACTTCAC CATT TGC AATG TTTTTAATTTCCAAC ileS 153463 - 150260 - | isoleucyl-tRNA synthetase TERM 123 151246 - 151290 + g 72 -3.5 -5.24129 | opp_overlap 151244 151251 151254, overlap 151248 151251 TAAAACTACTAAATA CAGAACAAGCAGTAGCACTGT TAA ACGTTGCCAATGCTTGATCTA TTTTTTGTACAGCAA TERM 124 151248 - 151288 + g 70 -6.1 -4.25873 | opp_overlap 151244 151251 151254, overlap 151246 151251 AAACTACTAAATACA GAACAAGCAGTAGCACTGT TAA ACGTTGCCAATGCTTGATC TATTTTTTGTACAGC TERM 125 152198 - 152168 - G 82 -9.9 -3.22777 | overlap 152166 TTTTACATACCAAGA TGATACAGCTTTA TATAT TAATGCTGTATCA GTACGCCAGCAATGA OTBS_0155 154117 - 153500 - | hypothetical protein rpsU 154276 - 154482 + | 30S ribosomal protein S21 holC 154951 - 154511 - | DNA polymerase III chi subunit TERM 126 155122 - 155142 + G 74 -8.5 -3.27743 | opp_overlap 155126, overlap 155126 TATTGATGTTTCAAT CTAATAAAA CCT TTTTATTAG TCTTGCTTGGTAATG proP 155109 - 156374 + | proline/betaine transporter TERM 127 156789 - 156776 - f 73 -3.9 -5.30155 | opp_overlap 156776, overlap 156769 CTATTAATTAAAAAA TTACT GCTT AGTAA TTCTTCAGGCTCTAC TERM 128 157509 - 157496 - g 74 -3.9 -5.30155 | opp_overlap 157496, overlap 157489 CTATTAATTAAAAAA TTACT GCTT AGTAA TTCTTCAGGCTCTAC OTBS_0160 157235 - 157942 + | hypothetical protein TERM 129 159196 - 159182 - g 76 -7.2 -4.30793 | GCAGATAATAAAGAA TGTAGT AGT ACTACA CATAGAGATAAGTAT ank2A2 158021 - 159256 + | ankyrin repeat-containing protein pnp 161579 - 159357 - | polynucleotide phosphorylase/polyadenylase TERM 130 161777 - 161751 - R 70 -3.8 -5.0917 | opp_overlap 161751 TTACCAAAAAAGAAA GTTGCTTATT TACAAAT AATATGCAAC TTAGTTATTGATTGC rpsO 162167 - 161898 - | 30S ribosomal protein S15 truB 162958 - 162191 - | tRNA pseudouridine synthase B OTBS_0168 164864 - 164424 - | putative transcriptional regulator OTBS_0170 165764 - 165477 - | hypothetical protein TERM 131 166641 - 166625 - R 74 -6.7 -4.35116 | opp_overlap 166628 TACGTGATATTAAAA TAATAGA TAC TCTATTA GCTTATGGAGCTGAT traC 167715 - 167446 - | conjugative transfer protein TERM 132 167497 - 167480 - G 77 -9.9 -2.69813 | overlap 167479 ATGACACAGCAGAAG CTTAGGC TGAA GCCTAAG TTGAAGGAGCACATG TERM 133 169304 - 169330 + r 74 -5.4 -4.96523 | opp_overlap 169316, overlap 169317 AAAATCTGTGCATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 134 169385 - 169399 + r 89 -3.6 -6.06529 | CTCACCTTCAGTAGA TCTAGA TAT TTTAGA TTTTTTTTATATATC TERM 135 169427 - 169462 + r 87 -11.4 -3.02043 | opp_overlap 169435 169436, overlap 169436 ATCTATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGAGCGAAATT TERM 136 169454 - 169435 - R 74 -5 -5.00884 | opp_overlap 169427 169436, overlap 169436 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGA TERM 137 169453 - 169436 - R 74 -8.5 -3.60048 | opp_overlap 169427 169436, overlap 169435 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 138 169436 - 169453 + r 85 -8.5 -4.56883 | opp_overlap 169436 169435, overlap 169427 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 139 171238 - 171279 + r 84 -9.1 -3.84585 | gap 1, overlap 171211 171236 ATTTCTTATAGTTAG GTTA-GTTATATCCACTTAA ACA TGAAGTGGATATAATATAAC TGTTTTATAGTGGCT tyrS 173034 - 171793 - | tyrosyl-tRNA synthetase tchB 174502 - 174816 + | hypothetical protein traV 174810 - 175049 + | conjugative transfer protein TERM 140 176285 - 176256 - T 77 -9.6 -3.02043 | opp_overlap 176256 176259 176262, overlap 176259 AATGTGGTTCTAACA GAAGAATAAAAA GAACTT TTTTTATTCTTC TCAATTATTTCTAAC TERM 141 176256 - 176285 + T 78 -10.3 -2.73799 | opp_overlap 176256 176259, overlap 176259 176262 AATGTGGTTCTAACA GAAGAATAAAAAG AACT TTTTTTATTCTTC TCAATTATTTCTAAC sppA 177224 - 176307 - | periplasmic serine proteases (ClpP class) miaB 177515 - 178864 + | MiaB-like tRNA modifying enzyme TERM 142 179706 - 179692 - g 80 -7.2 -4.64766 | CTGATATTGTAAAAA GCAAAA TGT TTTTGC CATGGAGCAATAGCC hemF 179019 - 179864 + | coproporphyrinogen III oxidase OTBS_0189 180005 - 180346 + | hypothetical protein TERM 143 181603 - 181591 - f 82 -6.3 -5.30199 | opp_overlap 181591 AAAAAGCAAGAAAAA TCCTT ATA AAGGA TATGGTTGCTCAAGG OTBS_0193 181605 - 181814 + | hypothetical protein OTBS_0194 182073 - 181891 - | hypothetical protein OTBS_0199 184775 - 184608 - | hypothetical protein TERM 144 184836 - 184820 - R 85 -2.3 -6.11243 | opp_overlap 184823, overlap 184823 ATTTAACAAAAAAAA TTAGTAA AAA TTACTTA ATATCAAACTAATAA OTBS_0200 185133 - 184912 - | hypothetical protein rpmE 185635 - 185411 - | 50S ribosomal protein L31 rpmB 185935 - 185645 - | 50S ribosomal protein L28 TERM 145 185811 - 185799 - G 82 -7.7 -4.35926 | overlap 185793 ACTTTAAATTTAAAA GCCTT TTT AAGGC TATCACTAAACAAAG rarD 186178 - 187050 + | putative permeases-like integral membrane protein TERM 146 187067 - 187047 - f 71 -7.1 -3.76167 | overlap 187045 TAATATCAACAAACA TTAAAAATT ATT AATTTTTAA ATGCTAAACAAAAAT proP 187314 - 188324 + | proline/betaine transporter TERM 147 188456 - 188433 - T 70 -5.4 -4.59109 | opp_overlap 188433, overlap 188420 TATACTTTTCAAAAA GTATATAACA TAAC TGTTTTATAC TAGGTTAGCTATAGC TERM 148 189979 - 189948 - T 72 -4.5 -5.0095 | overlap 189949 AAAAAGATAAGAAAA TGCATAGCAATAC TAAAGC ACATTGCTATGCT GCGCTATTTATAGTC TERM 149 189978 - 189949 - T 72 -8 -3.5691 | overlap 189948 AAAAGATAAGAAAAT GCATAGCAATAC TAAAGC ACATTGCTATGC TGCGCTATTTATAGT pbpE 191369 - 190158 - | penicillin-binding protein 4* TERM 150 191177 - 191197 + g 72 -2.5 -5.35224 | overlap 191178 191181 TGCAATCAAAATGCC CTACTGCTC CTC GAGCAATAA TTTTATTTTTATCAG aspS 193188 - 191395 - | aspartyl-tRNA synthetase TERM 151 191592 - 191579 - G 70 -8.1 -3.17229 | overlap 191577 ATTCCAGGAGCAATA CCACC ATGA GGTGG AGCTCCATAGCAAAA rpoC 197656 - 193466 - | DNA-directed RNA polymerase beta prime chain rpoB 201905 - 197772 - | DNA-directed RNA polymerase subunit beta TERM 152 201252 - 201223 - G 95 -8.9 -5.20333 | gap 1, opp_overlap 201212, overlap 201227 GATTCATAATAAAAA TTTA-GTATGTCAT GTG ATGACATACCTAAA GCCATAAGCAAAGTG TERM 153 201247 - 201227 - G 86 -11.3 -2.9432 | opp_overlap 201212, overlap 201223 CATAATAAAAATTTA GTATGTCAT GTG ATGACATAC CTAAAGCCATAAGCA rplL 202610 - 202221 - | 50S ribosomal protein L7/L12 TERM 154 202574 - 202558 - G 80 -5.9 -5.04175 | TCAATCACAGAAAAA GTTGATA ACA CATCAAC AGCTTTCTTTACATT rplJ 203141 - 202632 - | 50S ribosomal protein L10 rplA 203891 - 203145 - | 50S ribosomal protein L1 TERM 155 203242 - 203258 + g 79 -7.3 -4.44392 | CCATTCAAATAAGTT CCTTTTG CTT CAGAAGG TTTACTTTTTATTAT rplK 204341 - 203895 - | 50S ribosomal protein L11 nusG 204935 - 204381 - | transcription antitermination protein secE 205169 - 204960 - | preprotein translocase subunit SecE TERM 156 205266 - 205282 + r 70 -8.7 -2.64794 | opp_overlap 205265 TTGAACCCGCAACAC CCGGTTT TGG AGACCGG TGCTCTACCATTGAG tuf 206603 - 205419 - | elongation factor Tu TERM 157 206799 - 206810 + r 83 -3 -5.71712 | ATTAGTTATCACATT CTTT AACA AAAG TTTTTTTCTCTCAAC plsC 207539 - 206775 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase recR 208267 - 207656 - | recombination protein RecR ispZ 208892 - 208356 - | intracellular septation protein A OTBS_0219 209734 - 208886 - | hypothetical protein OTBS_0220 210128 - 209763 - | hypothetical protein OTBS_0222 211826 - 210594 - | hypothetical protein glnQ 212744 - 212013 - | glutamine ABC transporter ATP-binding protein yqiY 213363 - 212737 - | amino acid ABC transporter permease protein TERM 158 212957 - 212940 - G 72 -7.1 -3.85878 | TAAGAAGATTAATAA CTTCATT AACT AATGAAG GAATAATTTTTCTAA TERM 159 215128 - 215144 + r 73 -8.1 -3.46081 | opp_overlap 215128 215127 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCCTTAATTGAGTC OTBS_0227 217892 - 215466 - | hypothetical protein TERM 160 215648 - 215679 + g 74 -6.2 -4.44819 | TATGATTGAGTTCTT TATTAAAAATGATA AAAC TGTTATTTTTAATA TTTTCATGTATTATG TERM 161 218271 - 218261 - R 75 -4 -5.24449 | opp_overlap 218261 GATAAAGTGAAAAAA TCTA ATT TAGA GTCTTAGTTAAGTAA TERM 162 219522 - 219500 - R 75 -4.8 -5.06451 | opp_overlap 219503 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAATAGAATCC traN 224329 - 222668 - | conjugative transfer protein TERM 163 223703 - 223686 - G 72 -8.5 -3.14795 | overlap 223684 AAATTTCTACCAATA TGGTGTA TAGA TACACCA AGCCTATTAGCAATA trbC 224672 - 224352 - | conjugative transfer protein TERM 164 226129 - 226113 - R 74 -6.7 -4.35116 | opp_overlap 226116 TACGCGATATTAAAA TAATAGA TAC TCTATTA GCTTATGGAGCTGAT traC 227149 - 226784 - | conjugative transfer protein TERM 165 229698 - 229672 - R 83 -3 -5.7946 | TCTCCAACAAAAAAA GCTAAGCTAATC ATG GATGAGGTTAAC CTCAAAATTAAAGAA TERM 166 230143 - 230176 + r 80 -9.9 -3.32294 | opp_overlap 230145 230150, overlap 230145 230150 GTTGAAACTATATTC AAGATAATATACAAT TATA ATTGTATATTATCTC TTGTAGAGCATTTGC TERM 167 230174 - 230145 - R 100 -12.5 -3.17725 | opp_overlap 230145 230143 230150, overlap 230150 TGAAACTATATTCAA GATAATATACAAT TATA ATTGTATATTATC TCTTGTAGAGCATTT TERM 168 230145 - 230174 + r 100 -12.5 -3.22668 | opp_overlap 230145 230150, overlap 230143 230150 TGAAACTATATTCAA GATAATATACAAT TATA ATTGTATATTATC TCTTGTAGAGCATTT rhp2 232314 - 230272 - | hypothetical protein hkp6 235267 - 233690 - | putative signal transduction histidine kinase TERM 169 233823 - 233833 + g 71 -5.4 -4.68724 | opp_overlap 233823 233821 ACCAAGTCAAAATCA GCTA ATT TAGC TTTTATATTCCCTAA TERM 170 235428 - 235447 + r 74 -2.2 -5.62552 | opp_overlap 235422 235441, overlap 235422 235441 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATTTTTTT TERM 171 235441 - 235455 + r 93 -5.8 -6.09133 | opp_overlap 235441, overlap 235428 TTTTTGTCATAATTA TGAAAA ATT TTTTCA TTTTTTTTTAAAATA rhp5 236331 - 235780 - | hypothetical protein TERM 172 236616 - 236635 + H 71 -2.2 -5.38348 | opp_overlap 236610 236629, overlap 236610 236627 236629 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT dam3 236807 - 237637 + | site-specific DNA adenine methylase ank1u2 238777 - 238025 - | ankyrin repeat-containing protein TERM 173 240276 - 240295 + H 90 -10.8 -3.65581 | opp_overlap 240262 ATGTAGCTGCAATTT TTTGCAGG TTCA CCTGCAAA TTCTTGCAAATTGAT TERM 174 240331 - 240349 + H 87 -2.4 -6.20267 | AATTTCCTTGTTGTA GAAGGACA ATT TTTTCTTC TTTTTTTCTTTTTCA TERM 175 240359 - 240379 + H 75 -4.8 -5.08011 | TTCTTCTTTTTTTCT TTTTCAGT AAAAC GCTGAAAA TTTTTTAGAAGTTTT TERM 176 240718 - 240699 - H 86 -6.4 -5.4588 | opp_overlap 240699 240702 240710, overlap 240702 TAAAACGATAAAAAA CAGTTGCA TTAT TGCTACTG TTATTATTAGCAATT infA 242399 - 242623 + | translation initiation factor IF-1 maf 242649 - 243266 + | Maf-like protein TERM 177 243557 - 243541 - g 74 -8.7 -3.23893 | opp_overlap 243541, overlap 243539 AATCATAGATTAAGA GCTGCTA TTT CAGCAGC TAAATTTAATAACTT OTBS_0251 243394 - 244143 + | hypothetical protein TERM 178 246329 - 246307 - g 74 -5.7 -4.71426 | gap 1, overlap 246310 TTGCGATGAAGAAAA TCATGTGTTG CTAG CAACACA-GA ATGGTAAAGCTATAA TERM 179 246327 - 246310 - g 74 -8.5 -3.27725 | overlap 246307 CGATGAAGAAAATCA TGTGTTG CTAG CAACACA GAATGGTAAAGCTAT gyrA 244244 - 246961 + | DNA gyrase subunit A TERM 180 247982 - 248010 + G 100 -14.8 -4.33105 | TTACTAGATGCAGCT GGCATTACTTGT AATAA ACAAGTAATGCC TTTTGATACTACTTC glyA 246995 - 248275 + | glycine/serine hydroxymethyltransferase TERM 181 248610 - 248572 - T 89 -12.1 -2.86164 | opp_overlap 248580, overlap 248556 248574 248580 TTGGCAATCATTATA TAGCCAAACTACTATAA AACAG TTATAATAGTTTAGCTA TCACTATAGCCTAGA TERM 182 248608 - 248574 - T 79 -10.3 -2.98015 | opp_overlap 248580, overlap 248556 248572 248580 GGCAATCATTATATA GCCAAACTACTATAA AACAG TTATAATAGTTTAGC TATCACTATAGCCTA OTBS_0254 251455 - 248963 - | hypothetical protein TERM 183 249051 - 249034 - G 74 -6.3 -4.386 | TAATTCCGTATAAAA CAGGAAA ACAT CTTCCTG CAATATTATAGTAAC TERM 184 249125 - 249135 + g 71 -5.4 -4.56736 | GCTACCTGTAGCTTT TCCA TCC TGGA TTTTGATTATTCCAT TERM 185 251028 - 251044 + g 71 -2.3 -5.38249 | overlap 251030 TCTATATTATTAATT TTTATAG TGC CTATATA TTTTTTATCGTTGGT rnpA 252099 - 251842 - | ribonuclease P protein rpmH 252516 - 252382 - | 50S ribosomal protein L34 TERM 186 252881 - 252869 - H 70 -3.5 -5.1167 | AAGCTAAGATAAAAA TTATT GAA AATAA AGGCTGAACTAGCAG fbcH 253296 - 254090 + | cytochrome c1, heme protein precursor rph 255354 - 254599 - | tRNA nucleotidyltransferase TERM 187 255735 - 255721 - g 74 -5.8 -4.56133 | CTCCAAGAAGTAAAA GAATAT GCT ATATTC AACTTCGCTAAAGAT grpE 255484 - 256080 + | heat shock molecular chaperone protein rnd 257851 - 257219 - | ribonuclease D OTBS_0266 258157 - 257858 - | hypothetical protein cdsA 258821 - 258165 - | phosphatidate cytidylyltransferase TERM 188 258637 - 258657 + g 80 -6.1 -4.83615 | opp_overlap 258637 258642, overlap 258650 AGAATTATAACGACA CCTAATCCT ACT AGGAATGGG TTTTTATAACACATA uppS 259513 - 258818 - | undecaprenyl pyrophosphate synthetase abcZ 259688 - 261493 + | ABC transporter, ATP-binding protein dnaE 266479 - 262775 - | DNA polymerase III alpha chain TERM 189 263462 - 263506 + g 100 -13.2 -3.16742 | gap 1 ATGAATATTCTTTGC ATGTTTGCTAGCATAG-TTGT TAAT ACGATCTATGCTAGCAAACAA TTGGTGGCGGTTAAC TERM 190 263766 - 263782 + g 70 -8.1 -3.049 | TTATTTATATTTGGA GGTATAA CCT TTATACC TAATTGTTTAGCTTC TERM 191 266368 - 266345 - G 83 -8.2 -4.17987 | opp_overlap 266364 TAAAGAACCAAATAA GTTGCTCTTA TCAG TAAGAGCTAC TGCTGGCATTTCATC valS 269033 - 266469 - | valyl-tRNA synthetase TERM 192 268816 - 268793 - G 73 -7.6 -3.72743 | overlap 268795 TATCATCAAAACCAA TAGGAAAAAA TATA TTTTTTCCCA GCATTCGTTGATATC TERM 193 268814 - 268795 - G 73 -8 -3.43546 | overlap 268793 TCATCAAAACCAATA GGAAAAAA TATA TTTTTTCC CAGCATTCGTTGATA TERM 194 269809 - 269821 + G 74 -7.7 -3.7732 | TGTGCTGTTTATAGT TGCTG CTA CAGCA TTATTAATGTGGCAA ubiA 269063 - 269941 + | prenyltransferase OTBS_0275 270785 - 270048 - | hypothetical protein OTBS_0276 270967 - 270791 - | hypothetical protein mccF 271149 - 272147 + | microcin C7 self-immunity protein TERM 195 273264 - 273292 + T 93 -11.3 -3.58518 | opp_overlap 273263 273262 273267 273272, overlap 273262 273267 273272 TTTAGCCAAACAAGG CAAGAAGATTATA AGC TATAATTTTCTTG TATTTACTTGCTATT TERM 196 273267 - 273289 + T 74 -7.2 -3.90901 | opp_overlap 273267 273263 273262 273272, overlap 273264 273262 273272 AGCCAAACAAGGCAA GAAGATTATA AGC TATAATTTTC TTGTATTTACTTGCT TERM 197 273921 - 273931 + T 74 -5.4 -4.93547 | opp_overlap 273921 TTTGGCCATATAGCA GCAA TTT TTGC TTTTTGATTGATTAA TERM 198 274885 - 274901 + T 71 -2.3 -5.38951 | overlap 274882 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTBS_0282 276760 - 275561 - | hypothetical protein TERM 199 277055 - 277035 - R 78 -9.1 -3.32279 | overlap 277033 277039 GATGACAAGAATAGA TTAACACGG ATA CCGTATTAA GAATCAAGAAAAGAA TERM 200 277118 - 277068 - R 100 -13.3 -4.84262 | opp_overlap 277072 277075 277078, overlap 277072 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATGAATTGAAATA TERM 201 277114 - 277072 - R 90 -8.3 -4.91657 | opp_overlap 277072 277075 277078, overlap 277068 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATGAATTGA TERM 202 277072 - 277114 + r 79 -8.3 -3.99405 | opp_overlap 277068 277072, overlap 277075 277078 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATGAATTGA coxB 277945 - 277193 - | cytochrome c oxidase polypeptide II TERM 203 277855 - 277833 - G 72 -3.4 -5.19998 | overlap 277834 ATAATCAAAACAAAA TCATGGAGAC CAC GTATCGATGA CATTGCTTCTGTTAC OTBS_0284 278576 - 278100 - | hypothetical protein TERM 204 279915 - 279934 + G 76 -9.4 -3.14126 | CCAGTTATTAATCCT CCATGTTT ATTT AAACATGG TATTGGCCTTTATGC TERM 205 280068 - 280084 + G 75 -5.1 -5.1101 | overlap 280069 AGTTCTCTTAATTCT ACTGAGT TAG ACTCAGG TTTTTTGGATACTAC TERM 206 280069 - 280083 + G 77 -8.6 -3.65883 | overlap 280068 GTTCTCTTAATTCTA CTGAGT TAG ACTCAG GTTTTTTGGATACTA TERM 207 280892 - 280875 - g 70 -7.1 -3.74693 | TTTCAGTTTACTAAA CCAATTT TTGA AAATTGG ATTAAGCAACTAACT TrbL/VirB6 279441 - 281657 + | conjugal transfer protein TERM 208 281782 - 281755 - T 88 -8.6 -4.37554 | overlap 281756 AAAGTGAAACAGAAA TTTGCTTATGTT TAAA AACATAAGCAAG CAATGCAGAGAGGAC TERM 209 281781 - 281756 - T 93 -12.1 -3.20906 | overlap 281755 AAGTGAAACAGAAAT TTGCTTATGTT TAAA AACATAAGCAA GCAATGCAGAGAGGA OTBS_0289 283642 - 283403 - | hypothetical protein tpr1B4 284191 - 283817 - | TPR repeat-containing protein uvrA 288077 - 285165 - | excinuclease ABC subunit A TERM 210 286601 - 286591 - G 70 -4 -5.02476 | opp_overlap 286580 286591 ACATTCTTTAAAAAA GATA TCC TATC CTTAATTTCTTTTAT TERM 211 288144 - 288111 - H 100 -14.3 -2.72991 | opp_overlap 288111 288114 288120, overlap 288114 288120 CTATAGCCGCAATCA TAATTATAATTGACT AAAT AGTCAATTATAATTA TGTGGTAACAAAAAA TERM 212 288111 - 288144 + H 100 -14.3 -2.78384 | opp_overlap 288111 288114 288120, overlap 288114 288120 CTATAGCCGCAATCA TAATTATAATTGACT AAAT AGTCAATTATAATTA TGTGGTAACAAAAAA TERM 213 288114 - 288141 + H 93 -11.6 -3.54475 | opp_overlap 288111 288114 288120, overlap 288111 288120 TAGCCGCAATCATAA TTATAATTGACT AAAT AGTCAATTATAA TTATGTGGTAACAAA TERM 214 288141 - 288114 - H 93 -11.6 -3.51329 | opp_overlap 288114 288111 288120, overlap 288111 288120 TAGCCGCAATCATAA TTATAATTGACT AAAT AGTCAATTATAA TTATGTGGTAACAAA TERM 215 288175 - 288160 - H 86 -6.2 -5.4505 | opp_overlap 288162 288174 TGTGGTAACAAAAAA TAGCTT TTAA AAGCTA GGTTAAGTATAATAC TERM 216 289597 - 289575 - g 71 -8.5 -2.80816 | overlap 289580 TTTTTAGGTACGATA TTAGACGCT GATAT AGCGTCCAA AAAAGAATCAATAGT tnE 289416 - 290318 + | transposase and inactivated derivative ank1C2 292823 - 292987 + | ankyrin repeat-containing protein TERM 217 293450 - 293466 + F 73 -8.1 -3.46081 | opp_overlap 293450 293449 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCCTTAATTGAATC TERM 218 293520 - 293505 - f 72 -6.2 -4.24891 | overlap 293503 ATATACTAAAAAATA TATGCT TTTG AGCATA CTAGACATCGTTTTC TERM 219 294102 - 294070 - f 72 -8.1 -3.322 | opp_overlap 294066 294062, overlap 294074 ACTTTTATACATTAA TTAAGTTTTTTTA TTCATTT TAAAAAAACTTAA TGGATATATTTCGCT TERM 220 294763 - 294728 - f 74 -5.1 -4.88407 | gap 1, opp_overlap 294728 TTATGCAACTAAAAA TAAATTTTTTC-CTAA TGAAG CTAGAGAAAAAATTTA TTCACTTGCTAAGTA TERM 221 295469 - 295493 + F 70 -5.2 -4.68612 | gap 1, opp_overlap 295469 GTTTGATAGAAGAAA TTAGCTTGTAT ATAC AT-CAAGCTAA TTTTCTACTTTCTTT TERM 222 295534 - 295573 + F 77 -9.6 -2.99871 | opp_overlap 295542, overlap 295533 295542 GATAAGTTTTCTAGC TAGTATAATAGACTTGTT TTGA AAGAAGTCTATTATACCA TAGTTTAATCTAGAC OTBS_0302 296218 - 296598 + | hypothetical protein mviN 298149 - 296635 - | putative virlence factor, integral membrane protein TERM 223 298088 - 298074 - G 79 -5 -5.20534 | ATGAAGCAATAAAAA GTTCTC GCA GAAAAC CTGAAATCCTTGAAA aprD 299470 - 301224 + | alkaline protease secretion, ATP-binding protein aprE 301250 - 302806 + | alkaline protease secretion protein TERM 224 302858 - 302890 + F 73 -9.3 -2.60392 | overlap 302857 ATTACTTTTCTTTCA TGTTAGAGCTGATTT TTA AAATTGGCTCTAACC CTTGGTTAGCAAGTA tlc 307658 - 309190 + | ATP/ADP translocase TERM 225 309413 - 309399 - g 70 -7.2 -3.66784 | opp_overlap 309399 309398 309409 CTATGGCCAATAGAA CTTCAT GAA ATGAAG CTATTTATGCCAATG tlc 309345 - 310889 + | ATP/ADP translocase TERM 226 312208 - 312234 + G 71 -8.2 -3.27992 | overlap 312207 TATCACTAATTTTTA TCTGCTAAATTT TAG AGATTTAGTAGA CTTTATTATTGACTT OTBS_0314 310889 - 312694 + | hypothetical protein TERM 227 313554 - 313575 + G 72 -5.9 -4.52589 | opp_overlap 313554 313553 313556 GAACAAAAAGAAGAT GACTTTAAG CACG CTTTAAGTC TTTTATATACACACA TERM 228 313705 - 313685 - g 74 -4.1 -5.1523 | opp_overlap 313685, overlap 313689 TTTAGAATATAAAAA TTACTTAGA AAA TCTAACTAA ATATATTATTAATAG ispB 312714 - 313730 + | octaprenyl-diphosphate synthase traC 314296 - 314559 + | conjugative transfer protein TERM 229 314631 - 314619 - f 71 -7.7 -3.39895 | opp_overlap 314616 314619 TTGCTTATCAACTAA GCGAT ACA ATCGC TAATTCTTTAAAAGT TERM 230 315004 - 314994 - f 71 -6.8 -3.97108 | overlap 314995 AAGTTTAAAATACAA GCTG TGC CAGC CACAATTCAACAAGA TERM 231 315094 - 315066 - f 74 -6.9 -4.25658 | opp_overlap 315071 ACCCCATGAAAACAA TATAACATATACT TGA AGCATATGTTGTA AATAGTATAACTCAA tchE 315145 - 315306 + | hypothetical protein TERM 232 315956 - 315941 - f 70 -6.2 -4.19215 | overlap 315939 GAGACTCAAAAAATA CAGAAA AAGT TTTCTG ATACTACTAATTCAA TERM 233 317936 - 317920 - g 73 -8.1 -3.54574 | overlap 317929 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA tnD 317482 - 318444 + | transposase and inactivated derivative TERM 234 318484 - 318442 - f 87 -8.3 -4.77157 | opp_overlap 318448 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA GACCTCTTTCGAAAC TERM 235 320692 - 320717 + F 71 -6.9 -3.88498 | gap 1, overlap 320711 CAGCTACTTATTTCA GCCTGGATAAGC ATA GCT-ATCAAGGC TTTGATGTGTAGAAA TERM 236 321240 - 321273 + F 73 -5.5 -4.67173 | opp_overlap 321241, overlap 321242 CAAAAAACTTAAGTT AGTGGATTATTAATT TAAA AGTTAATAATCCATG TTATTTTTTACATTA TERM 237 321242 - 321271 + F 93 -10.3 -3.92369 | opp_overlap 321241, overlap 321240 AAAAACTTAAGTTAG TGGATTATTAATT TAAA AGTTAATAATCCA TGTTATTTTTTACAT TERM 238 324332 - 324277 - f 77 -9.6 -3.00525 | gap 1, opp_overlap 324287 324291, overlap 324280 324282 324291 TTTCTTGAAACTATA CTA-TATCATATTAATAACTGAAAAAT TAT ATTATACAGTTATTAATATGATAATAA TGATATAATGCAATT TERM 239 324328 - 324280 - f 100 -15.1 -2.7314 | opp_overlap 324287 324291, overlap 324277 324282 324291 CTTGAAACTATACTA TATCATATTAATAACTGAAAAAT TAT ATTATACAGTTATTAATATGATA ATAATGATATAATGC TERM 240 324326 - 324282 - f 100 -13.3 -2.90725 | opp_overlap 324287 324291, overlap 324280 324277 324291 TGAAACTATACTATA TCATATTAATAACTGAAAAAT TAT ATTATACAGTTATTAATATGA TAATAATGATATAAT apaG 324523 - 324948 + | ApaG pleD 326803 - 325334 - | response regulator PleD ubiX 327285 - 327848 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase corC 328812 - 327898 - | Mg2+/Co2+ transporter TERM 241 328765 - 328786 + g 80 -5.9 -4.9725 | opp_overlap 328763 328765, overlap 328785 TGCTGTTATATAATA GGCAATAAA GTGC TTTTTTGCC TTTTTATCTAAAGGT OTBS_0333 329328 - 328825 - | putative metalloprotease ftsY 331703 - 330765 - | cell division ABC transporter, periplasmic substrate-binding protein OTBS_0337 331813 - 332202 + | hypothetical protein trbG/virB9 333223 - 332462 - | conjugal transfer protein virB8 333914 - 333213 - | type IV secretion system protein TERM 242 336097 - 336110 + r 70 -5.3 -4.55826 | opp_overlap 336082 336080, overlap 336080 TGGCTGCTTCTAAGC CAACT TCCT AGTTG TTTTGGTCTTTTCAC TERM 243 336722 - 336734 + r 72 -6.2 -4.2354 | CAGATCTATTTCACT CCCC TAACC GGGG TTCTTTTCACCTTTC thyX 338394 - 337492 - | FAD-dependent thymidylate synthase cinA 338941 - 338438 - | putative competence/damaged related protein TERM 244 338941 - 338955 + g 73 -4.4 -4.96646 | CATCATCCAACTGCA TAAATT ATA AATTTA TTTTTAATTCTATAA pgpA 339609 - 339007 - | phosphatidylglycerophosphatase rhp4 341176 - 341490 + | hypothetical protein TERM 245 341701 - 341669 - f 78 -6.5 -4.84363 | opp_overlap 341669 341673 341677 341694, overlap 341659 341673 341694 TTAAACTATCAAAAA TCAATTAATCTTGAT AGT ATCAAGATTAATTCC ATTAATTTTATTAAT TERM 246 341697 - 341673 - f 95 -11.7 -3.85504 | opp_overlap 341669 341673 341677 341694, overlap 341659 341669 341694 ACTATCAAAAATCAA TTAATCTTGAT AGT ATCAAGATTAA TTCCATTAATTTTAT TERM 247 341673 - 341697 + F 95 -11.7 -3.29386 | opp_overlap 341659 341673 341669 341694, overlap 341669 341677 341694 ACTATCAAAAATCAA TTAATCTTGAT AGT ATCAAGATTAA TTCCATTAATTTTAT TERM 248 341677 - 341693 + F 73 -8.1 -3.41636 | opp_overlap 341659 341673 341669, overlap 341673 341669 TCAAAAATCAATTAA TCTTGAT AGT ATCAAGA TTAATTCCATTAATT perM 341834 - 342880 + | putative permease protein hemA 344101 - 342890 - | 5-aminolevulinate synthase ptrB 346188 - 344134 - | protease II TERM 249 345805 - 345793 - G 77 -7.7 -4.09509 | ACCAACTGATACAAA TGAGC AAT GCTCA GCTAATTCATTTACA TERM 250 346263 - 346236 - R 72 -8 -3.57908 | opp_overlap 346236 346241, overlap 346241 CATTAAATACCAGAA CAAAATATAATC AAAA GATTATATTTTA TCTTCAAGCTGTTTA TERM 251 346241 - 346258 + r 73 -5.7 -4.66938 | opp_overlap 346236 346241, overlap 346236 AATACCAGAACAAAA TATAATC AAAA GATTATA TTTTATCTTCAAGCT TERM 252 346258 - 346241 - R 75 -5.7 -4.83722 | opp_overlap 346241 346236, overlap 346236 AATACCAGAACAAAA TATAATC AAAA GATTATA TTTTATCTTCAAGCT rpsT 346526 - 346254 - | 30S ribosomal protein S20 rplQ 347045 - 346608 - | 50S ribosomal protein L17 rpoA 348092 - 347064 - | DNA-directed RNA polymerase alpha chain rpsK 348521 - 348141 - | 30S ribosomal protein S11 rpsM 348908 - 348531 - | 30S ribosomal protein S13 adk 349620 - 348988 - | adenylate kinase secY 350936 - 349629 - | preprotein translocase subunit SecY TERM 253 350458 - 350447 - G 77 -3 -5.58454 | TCCACATTAAAAAAA TTGT ACCT ACAA CTAAAGTTACAACAG rplO 351429 - 350938 - | 50S ribosomal protein L15 TERM 254 351195 - 351217 + g 90 -8 -4.90302 | opp_overlap 351194 351201 351204 CTAAACGTAAAATTG TTATAATATT AAT AATATTATAA TTTCTTTTATTCATA TERM 255 351658 - 351643 - R 81 -2.6 -5.68023 | overlap 351645 351646 351647 CTATAACCAAAAAAA TACCTT ATCA AAGATA AAAACACTAACCTTC rpsE 352183 - 351665 - | 30S ribosomal protein S5 rplR 352578 - 352204 - | 50S ribosomal protein L18 rplF 353125 - 352592 - | 50S ribosomal protein L6 rpsH 353548 - 353147 - | 30S ribosomal protein S8 TERM 256 353242 - 353260 + g 78 -9 -3.55478 | opp_overlap 353241 AAATAATATAAATTC CCATATTA TTA TAATATGG TCTTAATTTTTTAAT rpsN 353876 - 353571 - | 30S ribosomal protein S14 TERM 257 353699 - 353715 + g 70 -8.1 -3.06133 | CACACCTATTTCTAA TTCTAGT ACT ACTAGAA TTACGTGGAAGCTTG rplE 354464 - 353895 - | 50S ribosomal protein L5 rplX 354797 - 354477 - | 50S ribosomal protein L24 rplN 355167 - 354799 - | 50S ribosomal protein L14 rpsQ 355502 - 355263 - | 30S ribosomal protein S17 rpmC 355724 - 355503 - | 50S ribosomal protein L29 rplP 356127 - 355717 - | 50S ribosomal protein L16 rpsC 356812 - 356156 - | 30S ribosomal protein S3 rplV 357178 - 356828 - | 50S ribosomal protein L22 rpsS 357458 - 357180 - | 30S ribosomal protein S19 rplB 358303 - 357482 - | 50S ribosomal protein L2 rplW 358600 - 358304 - | 50S ribosomal protein L23 TERM 258 358347 - 358363 + g 90 -5.1 -5.71712 | ATCACCTGATCTTTT GCTACAG TAA CTATAGC TTTTTTTCTATCACA rplD 359229 - 358597 - | 50S ribosomal protein L4 rplC 359933 - 359244 - | 50S ribosomal protein L3 rpsJ 360225 - 359911 - | 30S ribosomal protein S10 tuf 361535 - 360261 - | elongation factor Tu TERM 259 361831 - 361857 + H 77 -8.2 -3.80573 | opp_overlap 361831 361834 361855, overlap 361834 361852 TAGTACTTTCTATAA TAATTACTTGAT TCT GTCAAGTGATTA TTTAATAATCGTCAA spoU 361910 - 362638 + | tRNA/rRNA methyltransferase recA 362733 - 363803 + | recombinase A fabG 363797 - 364522 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 364644 - 365030 + | acyl carrier protein TERM 260 365050 - 365033 - f 75 -4.3 -5.27476 | opp_overlap 365033, overlap 365028 TTTAACAAAATAAAA TTTAATT TTAA AATTAAA TTTCTTAAACCATCT TERM 261 365652 - 365630 - g 77 -9.9 -2.5602 | overlap 365650 CAATCAGTTAACTCA GCATGCGCT ACAGG AGCACATGC AATCACTGATGCAGC TERM 262 366379 - 366361 - g 77 -9 -3.21099 | opp_overlap 366358 CTTTGGCAGTACTAA TGTTAGTA TAG TACTAACA AAATTTGCCTAAAAT fabF 365120 - 366391 + | 3-oxoacyl-[acyl carrier protein] synthase II purC 368969 - 368211 - | phosphoribosylaminoimidazole-succinocarboxamide synthase OTBS_0389 369375 - 368929 - | putative oligoketide cyclase/lipid transport protein TERM 263 369379 - 369393 + r 74 -2.2 -5.53436 | overlap 369382 369384 AAAAAACAGCATTAT TTTTGT AAT ATAAAA TTTTTTATATTATAT TERM 264 369382 - 369407 + r 71 -5.7 -4.41206 | overlap 369379 369384 AAACAGCATTATTTT TGTAATATAAA ATTT TTTATATTATA TTTTGTAGCCTCATT lipA 370306 - 369398 - | lipoyl synthase TERM 265 370257 - 370284 + g 79 -10 -2.88243 | gap 1, opp_overlap 370259, overlap 370253 370259 GCTTTAACTCTTAAC CAGCTA-GGCCTT ACT AAGGCTGTAGCTG TAATATTCTTATCGC sppA 371225 - 370317 - | periplasmic serine proteases (ClpP class) smpB 371707 - 371246 - | SsrA-binding protein dapA 372606 - 371710 - | dihydrodipicolinate synthase ilvE 373489 - 372587 - | branched-chain amino acid aminotransferase recD/traA 375898 - 373703 - | helicase RecD/TraA, ATP-dependent exoDNAse (exonuclease V) TERM 266 375935 - 375947 + r 81 -4.9 -5.43487 | overlap 375941 ATTCTTTATTGATTA TCTTT TGA AAAGA TTTTTTCTCTAATTT rplS 376299 - 375925 - | 50S ribosomal protein L19 trmD 377090 - 376296 - | tRNA (guanine-N(1)-)-methyltransferase TERM 267 376940 - 376953 + g 72 -2.5 -5.34309 | TAATATTAATAGCTT TATAT GACC ATATA TTTTTCTTTAATGCT OTBS_0398 378953 - 377103 - | hypothetical protein OTBS_0399 379521 - 378955 - | hypothetical protein tolC 380948 - 379572 - | outer membrane efflux protein TERM 268 379643 - 379664 + g 88 -6.7 -5.19275 | AATTTAATGATTTAG CAGTTAATT TATT AGTTAACTG TTTTATTTTATACAT TERM 269 381324 - 381349 + G 74 -7 -4.21438 | TTCCTTGAGACTGTT TTAGCTGAGA AAAATG TTTCAGCTAA TTCTTTATTGGCATA xerD 381291 - 382220 + | site-specific tyrosine recombinase XerD TERM 270 382237 - 382214 - f 79 -5.5 -5.0538 | opp_overlap 382214, overlap 382230 TGCTAGCTTAAAAAA GTATTAAAT AACATA ATTTAATAC TTTAAAGCTGAAGTG TERM 271 382301 - 382317 + F 73 -8.7 -3.12142 | opp_overlap 382300 382316 AAAGTGCGACATGAC GCTGCTG AAA CAGTAGC TATATTAGATGTAGC traF 382882 - 383355 + | conjugative pilus assembly protein surf1 384072 - 383350 - | surfeit locus protein 1 TERM 272 383552 - 383534 - G 73 -4.6 -5.10064 | opp_overlap 383534 383535 383550, overlap 383535 TGTAACAGATAAAAA TTGCTAAT CTT ATTAGCAT ATTGTTGGCCAATGT TERM 273 383535 - 383551 + g 73 -8.1 -3.39288 | opp_overlap 383534 383535, overlap 383534 383550 GTAACAGATAAAAAT TGCTAAT CTT ATTAGCA TATTGTTGGCCAATG TERM 274 383551 - 383535 - G 75 -8.1 -3.64954 | opp_overlap 383535 383534 383550, overlap 383534 GTAACAGATAAAAAT TGCTAAT CTT ATTAGCA TATTGTTGGCCAATG TERM 275 383926 - 383902 - G 74 -8.9 -3.03635 | opp_overlap 383891 383905 383907, overlap 383905 TAAATGTCTTGAAGA TAATTTAAATA CTT TATTTAAATTA ATAGGAATAGAATCT fabZ 384314 - 384817 + | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase TERM 276 385360 - 385350 - g 72 -2.6 -5.4251 | TTCAGACAGAAAAAA TTTA TGG TAAA AGTAAGTTAACAATT OTBS_0405 384821 - 385396 + | putative methylase radA 385396 - 386751 + | DNA repair protein RadA rarD 387710 - 386790 - | putative permeases-like integral membrane protein TERM 277 387088 - 387062 - G 83 -10.4 -3.08812 | opp_overlap 387048 387066, overlap 387066 GTGTGCTTAATAAAG CAAATGTTGATA ATT TATCAACATTTA ATATCAATAGAAAAA TERM 278 387066 - 387084 + g 81 -9 -3.84825 | opp_overlap 387066 387062 GCTTAATAAAGCAAA TGTTGATA ATT TATCAACA TTTAATATCAATAGA TERM 279 387084 - 387066 - G 88 -9 -4.21141 | opp_overlap 387066, overlap 387062 GCTTAATAAAGCAAA TGTTGATA ATT TATCAACA TTTAATATCAATAGA TERM 280 389705 - 389689 - g 71 -2.3 -5.4492 | GATATATACAAAAAA TTAAAAG ACG CTATTAA ACAAAACTTTGAATC OTBS_0408 387862 - 389760 + | hypothetical protein TERM 281 390152 - 390183 + G 80 -7.5 -4.26903 | opp_overlap 390157 GCTGCTACAGGTCTT GATAATGATATCT ATAGAC AGATATCATTAAC TTTTCCTAAACTAGA OTBS_0409 389801 - 391729 + | hypothetical protein TERM 282 391837 - 391868 + F 77 -9 -3.60971 | opp_overlap 391840 391842, overlap 391838 391840 GACATTAAGTGTGCA ATATAGTATAACTT TTTG AAGTTATACTATAC TTTGAAACTTAGCAT TERM 283 391838 - 391867 + F 100 -12.5 -2.76261 | opp_overlap 391840 391842, overlap 391837 391840 ACATTAAGTGTGCAA TATAGTATAACTT TTTG AAGTTATACTATA CTTTGAAACTTAGCA TERM 284 391865 - 391840 - f 83 -10.7 -3.04501 | opp_overlap 391838 391837 391840, overlap 391842 ATTAAGTGTGCAATA TAGTATAACTT TTTG AAGTTATACTA TACTTTGAAACTTAG TERM 285 391840 - 391865 + F 83 -10.7 -2.92667 | opp_overlap 391840 391842, overlap 391838 391837 ATTAAGTGTGCAATA TAGTATAACTT TTTG AAGTTATACTA TACTTTGAAACTTAG TERM 286 391863 - 391842 - f 73 -8.9 -3.0782 | opp_overlap 391840 391838 391837, overlap 391840 TAAGTGTGCAATATA GTATAACTT TTTG AAGTTATAC TATACTTTGAAACTT TERM 287 392367 - 392351 - f 74 -2.3 -5.56568 | overlap 392352 392360 ACATCAGCAAAAAAA GTACTTA AAT TAAGTAA ACTACTTTAAGTATA TERM 288 392391 - 392414 + F 70 -5.4 -4.57073 | opp_overlap 392391, overlap 392412 AAGTATAGTAACCCA GTATAAAACA GTTA TGTTATATAC TTTTTGAAAAAGGTA TERM 289 393512 - 393490 - f 100 -10 -4.66264 | TAAAACTTCTAAAAA TTTTTCAGCG TTT CACTGAAAAA GAAACAAAATGAGAA TERM 290 393594 - 393577 - f 85 -8.5 -4.46233 | opp_overlap 393584 CCAACCTTAAAGAAA TTTCAGG TGAA CCTGAAA AAAGTTTCAGGTACA TERM 291 393584 - 393609 + F 75 -9.1 -2.93382 | opp_overlap 393577 TAAAGAAATTTCAGG TGAACCTGAAA AAAG TTTCAGGTACA TATATAGATATAAAA rhp7 393975 - 394175 + | hypothetical protein int 394300 - 395544 + | phage-related integrase tchA 395670 - 396005 + | hypothetical protein traE 396005 - 396337 + | conjugative transfer protein dam4 396829 - 396689 - | site-specific DNA adenine methylase TERM 292 400791 - 400846 + r 100 -8.6 -5.30686 | gap 1, opp_overlap 400821, overlap 400798 TCTGCAATGATAATA GTTCTTACTTGTTTAGCAGATACTGAG AAA TTTAGT-TCTGCTAAACAAGTTGTAGC TTTTTTGTAGGTCTT TERM 293 400798 - 400839 + r 100 -14.1 -3.60344 | gap 1, opp_overlap 400821, overlap 400791 TGATAATAGTTCTTA CTTGTTTAGCAGATACTGAG AAA TTTAGT-TCTGCTAAACAAG TTGTAGCTTTTTTGT TERM 294 401126 - 401155 + r 100 -11.1 -4.91285 | opp_overlap 401130 401133, overlap 401130 TCTTTCAATCCTTCA GAAATAATAATTT TATA AAATTATTATTTC TTTTCTTGTCTTAAT TERM 295 401130 - 401151 + r 80 -6.1 -4.94168 | opp_overlap 401130 401133, overlap 401126 TCAATCCTTCAGAAA TAATAATTT TATA AAATTATTA TTTCTTTTCTTGTCT OTBS_0426 402977 - 402798 - | hypothetical protein TERM 296 403349 - 403359 + r 86 -2.6 -6.13503 | AACCTTGCCTTGCCT TAAA TTT TTTA TTTTTTTTATTAATA rpmJ 403457 - 403332 - | 50S ribosomal protein L36 TERM 297 405584 - 405564 - R 81 -2.6 -5.79595 | opp_overlap 405564 GTTTAAAATAAAAAA TGACATAC GAAAA GTATCTCA CTTATTTAACGACTT TERM 298 407884 - 407845 - R 91 -9.8 -4.07885 | opp_overlap 407854 407857, overlap 407850 TACTCCTTCGCAAAA TTAAATTAATAATTATTA GCTT TAATAATTATTAATCCAA TCTATAATATCTTGC TERM 299 407879 - 407850 - R 91 -9.7 -4.19735 | opp_overlap 407854 407857, overlap 407845 CTTCGCAAAATTAAA TTAATAATTATTA GCTT TAATAATTATTAA TCCAATCTATAATAT trxA 408192 - 407866 - | thioredoxin TERM 300 408102 - 408075 - G 80 -9.2 -3.60818 | gap 1 CTAAAATTGGTGAAA GCTGAC-GGCATG GAC CACACCAGTCAGC GTAAAAATCTACTAA omp1 410580 - 408211 - | outer membrane protein TERM 301 408336 - 408320 - G 79 -7.3 -4.371 | CCTATTATATCAAAA GTTAGTC CAA GACCAAC AGAAGCTCTTAAATT OTBS_0436 411654 - 410593 - | putative membrane-associated zinc-dependent metalloprotease TERM 302 411080 - 411091 + g 70 -4.4 -4.78077 | CTATATAATTTTGCA TGTG GCAC CACA TTTATTTTCATTAAC TERM 303 411363 - 411344 - G 71 -2.1 -5.32396 | opp_overlap 411344 411359 ATAGCAAAAATAAAA TTCGCTG CTGGAC CAGCTAA TACTATCAGCATTCT rmuC 413104 - 411764 - | DNA recombination protein TERM 304 412849 - 412824 - G 87 -9.9 -3.82097 | gap 1, opp_overlap 412823 412827, overlap 412816 412827 CCTAAATCTAGCAAA GAAGCTTTAGCA AGT TGC-AAAGCTTC CTCATTCATTTTTTC ksgA 413992 - 413171 - | dimethyladenosine transferase OTBS_0439 414986 - 414111 - | hypothetical protein TERM 305 415091 - 415066 - R 72 -7.7 -3.67112 | opp_overlap 415066 AGTATATCTTAATAA TAGCTAGGCAA ACTA TTACCTAACTA TCATTTCAATTCCTG hupA 415556 - 415179 - | histone-like DNA-binding protein HU TERM 306 415318 - 415308 - G 71 -5.4 -4.55721 | AAATCTTACACAAAA GCTT CCA AAGC CTACAATATTTATAT TERM 307 415562 - 415542 - G 89 -7.7 -5.06116 | AAAATAATAATAAAA GTTACATTG TAC CAATATAAC TAAACATCTAACTAA znuA 416939 - 416061 - | zinc/manganese ABC transporter substrate binding protein TERM 308 416672 - 416635 - G 81 -4.3 -5.47218 | gap 1, opp_overlap 416635 TGCGACTGAAAAAAA GACGATAG-TTTAGTCAT ATA ATGCTCAAATCTATCGTC TATATATATTATTAA pcnB 418144 - 416936 - | polyA polymerase TERM 309 418191 - 418166 - R 74 -6.3 -4.38843 | gap 1, opp_overlap 418166 CAAAATATCAACAAA CATCAGCACTAT ATA ATAG-GCTAATG TTTTATTAAGAATAA gltP 419408 - 418197 - | putative proton/glutamate symporter TERM 310 418659 - 418669 + g 70 -4 -4.9792 | overlap 418650 TAAAGCTAGAATTTG GTAT TCT ATAC TTTTTCTATAAAATG uvrD 423038 - 419574 - | ATP-dependent DNA helicase UvrD TERM 311 421356 - 421378 + g 76 -6.4 -4.72007 | opp_overlap 421356 421355 TCTTTTAGATAAAAT TTGCAGATTA ACA TAATGTGCAA TTTGTTTTGCTAGCA sixA 423541 - 423050 - | phosphohistidine phosphatase TERM 312 423155 - 423167 + g 85 -2.7 -6.12328 | opp_overlap 423144 CACACAAGCTGGAAC TAGCT TAA AGTTA TTTTTTTTCTGTTGT dapB 424456 - 423605 - | dihydrodipicolinate reductase TERM 313 423771 - 423783 + g 81 -9.1 -3.86822 | ATAAACATTACTTCA TGCCG GCA CGGCA TTTCTCCAGCCCTTA TERM 314 423826 - 423836 + g 74 -4 -5.24416 | CAATATCATTTTTCT TTGT AGT ACAA TTTTTCTTCTGCTTG yqiX 425266 - 424463 - | amino acid ABC transporter substrate binding protein TERM 315 426042 - 426066 + H 93 -11.7 -3.15544 | opp_overlap 426032, overlap 426046 CTATATCTTCTATGT TGAAGAAAAAA TAA TTTTTTCTTCA TTAATAGCCGTGAAA cox11 426076 - 426603 + | cytochrome C oxidase assembly protein rpmF 427658 - 427452 - | 50S ribosomal protein L32 smpA 427755 - 428120 + | putative outer membrane lipoprotein TERM 316 428296 - 428286 - T 70 -5.4 -4.56702 | opp_overlap 428286 GCTTAATTAAAGAAA TACC ATA GGTA TTTGCTAAAGTCTTC era 429568 - 428648 - | GTP-binding protein Era OTBS_0455 430584 - 429565 - | hypothetical protein prfA 431867 - 430788 - | peptide chain release factor TERM 317 431676 - 431690 + g 86 -7.2 -4.91977 | opp_overlap 431675 431678 CTGTTCTGTATCAAT TACTTG TTG CAAGTA TTTTATATTTTCATG OTBS_0457 432173 - 432003 - | hypothetical protein TERM 318 433348 - 433330 - R 71 -4.6 -4.82901 | overlap 433332 TTCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 319 433446 - 433411 - R 87 -11.4 -3.02043 | opp_overlap 433419 433420, overlap 433420 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA GGGACATATATAGAT TERM 320 433419 - 433438 + r 74 -5 -5.00884 | opp_overlap 433411 433420, overlap 433420 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 321 433420 - 433437 + r 74 -8.5 -3.60048 | opp_overlap 433411 433420, overlap 433419 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 322 433437 - 433420 - R 85 -8.5 -4.56883 | opp_overlap 433420 433419, overlap 433411 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 323 433488 - 433474 - R 89 -3.6 -6.06529 | GATATATAAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 324 433568 - 433542 - R 74 -5.4 -4.96523 | opp_overlap 433542 433545, overlap 433537 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACGGACTTC TERM 325 434211 - 434195 - R 70 -5.9 -4.30014 | overlap 434196 TTGAGCAACTCAAAA CTGTTTC ACA GAAACAA ATCAATGAAGAAGAG TERM 326 435611 - 435596 - R 77 -7.6 -4.1721 | opp_overlap 435586 ACTCAGAGCTTAAAA GCTCTT GCTA AAGAGC TCAATATTCCAATAA TERM 327 436283 - 436314 + r 70 -8.2 -3.21099 | opp_overlap 436283 ATGTTGTAGAGGTAA GGTTTTGAATTTTA TTTA TGCAATTCAAAACC TTAATAGTGCAAGCA ank1B1 437612 - 436440 - | ankyrin repeat-containing protein TERM 328 441349 - 441331 - g 79 -2.4 -5.89947 | GAAAGTTAAAAAAAA TATGTTCC CTT AGATCATA TCGGCAATAATTTCT gppA 439896 - 441359 + | Ppx/GppA family phosphotase TERM 329 442424 - 442442 + F 74 -6.8 -4.2338 | overlap 442428 AAGTGAATATACATT TAGAGATG ATA CATCTTTA TTATTTCTATTGATA TERM 330 442428 - 442438 + F 70 -5.4 -4.66814 | overlap 442424 GAATATACATTTAGA GATG ATA CATC TTTATTATTTCTATT TERM 331 442527 - 442537 + F 72 -2.6 -5.4182 | overlap 442533 GTTTGGTTATTCCTT TTTT ATG AAAA TTTTTCTTTATAATT TERM 332 443512 - 443473 - g 71 -8.8 -2.8664 | overlap 443465 CATGTAATGATCATA TGCTCTACAATAATATTG ACAA CTATTTTATTGTAGAACA TGTAACACTAGTAAT OTBS_0467 442860 - 443591 + | intradiol ring-cleavage dioxygenase TERM 333 444060 - 444032 - f 81 -3.9 -5.58051 | AAAGAAAAAATAAAA TAAGCGGTACT TGCATTT AGTACTGCTCA TAAAAATTTTTACTC TERM 334 444255 - 444244 - g 73 -4.4 -5.08011 | AAAAGTGGCAAAAAA TCTG GGAG CAGA ATGAGGTATTTAAAG TERM 335 444501 - 444476 - g 100 -13.5 -4.21812 | TGCCATGCAAAATAA TACTTACCCAA ATAG TTGGGTAAGTA GCAACGTTGATGTTA TERM 336 446266 - 446250 - g 86 -9.5 -4.08689 | AATAAAATTGATAAA GTTTTGC TTA GCAAAAC GCACAAAACTATTAA leuS 444207 - 446723 + | leucyl-tRNA synthetase TERM 337 447201 - 447219 + G 74 -7.4 -4.08644 | opp_overlap 447201 447200 447198 447203, overlap 447198 447214 AGCAGGCAAAAATAT TACTGCAG AAG CGGCAGTA TATTTTTCTAATACT holA 446743 - 447762 + | DNA polymerase III subunit delta TERM 338 449070 - 449087 + G 86 -5.7 -5.43414 | TAGCTTTAATGGATT CTTATTA GCAC TAATAAG TTTTTTGTGTATGAT mgtE 447949 - 449316 + | magnesium transporter OTBS_0471 450925 - 449414 - | Zn-dependent carboxypeptidase TERM 339 451862 - 451883 + H 71 -8.9 -2.80077 | opp_overlap 451860 451862, overlap 451860 451859 451865 ATATAATGAAGAAGA GAAGTTAAT TTTT ATTAACTTC TGCATTTTATAGAAC TERM 340 451883 - 451862 - H 76 -8.9 -3.51837 | opp_overlap 451862 451860 451859 451865, overlap 451860 ATATAATGAAGAAGA GAAGTTAAT TTTT ATTAACTTC TGCATTTTATAGAAC TERM 341 452586 - 452605 + H 86 -6.4 -5.4588 | opp_overlap 452586 AATTACTAATAATAA CAGTAGCA ATAA TGCAACTG TTTTTTATCGTTTTA TERM 342 452945 - 452925 - H 81 -4.8 -5.35222 | AAAACTTATAAAAAA TTTTCAGC GTTTT ACTGAAAA AGAAAAAAAGAAGAA TERM 343 452973 - 452955 - H 87 -2.4 -6.20267 | TGAAAAAGAAAAAAA GAAGAAAA AAT TGTCCTTC TACAACAAAAAAATT TERM 344 453028 - 453009 - H 90 -10.8 -3.65581 | opp_overlap 453017 ATCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT TERM 345 453990 - 453974 - H 71 -7.3 -3.80858 | opp_overlap 453959 453974 453970 TCAGAACTTAGTAAA GAGCTAG GTT CTAACTC TATATTGTTCAAAGT TERM 346 456431 - 456403 - g 73 -7.5 -3.69934 | opp_overlap 456403, overlap 456404 AAATAATATTTGAAA CTCAGCAAGAATT TAT ATCTCTTGCTGAA TACCTTAAACTACCA TERM 347 456430 - 456404 - g 71 -8.8 -2.80876 | opp_overlap 456403, overlap 456403 AATAATATTTGAAAC TCAGCAAGAATT TAT ATCTCTTGCTGA ATACCTTAAACTACC spoT7 455919 - 456494 + | spoT-like ppGpp hydrolase ank1C3 456532 - 457176 + | ankyrin repeat-containing protein TERM 348 458237 - 458281 + T 80 -9 -3.72695 | gap 1 AAATAAGTTTTCTGG CTATG-TATAATAGACTTGTT TTGA AAGAGGTCTATTATACCATAG TTTAATCCAGACAGT TERM 349 458601 - 458623 + T 82 -10.7 -2.87683 | opp_overlap 458588 458601, overlap 458591 458603 ACGCATATGTTATAA TATGCTAGG AAGCA CCTAGCATA TCTATAGACGCATAT TERM 350 458623 - 458601 - T 87 -10.7 -3.3514 | opp_overlap 458601 458591 458603, overlap 458588 ACGCATATGTTATAA TATGCTAGG AAGCA CCTAGCATA TCTATAGACGCATAT TERM 351 458603 - 458621 + T 72 -8.9 -2.98942 | opp_overlap 458588 458601, overlap 458601 458591 GCATATGTTATAATA TGCTAGG AAGCA CCTAGCA TATCTATAGACGCAT OTBS_0478 459254 - 458721 - | hypothetical protein TERM 352 460029 - 460009 - g 87 -5.6 -5.64328 | AACAAAAAAATAAAA GTATATTT AATAA AAATATAC AGTTAAAACTGTTAC OTBS_0480 459972 - 460247 + | hypothetical protein TERM 353 460260 - 460238 - f 100 -13.6 -2.83345 | opp_overlap 460238 460233, overlap 460235 GTCATATACCAATCA GCTTAGCTAA CAG TTAGCTAAGC TTGCTATTTCAAATT TERM 354 460238 - 460260 + F 100 -13.6 -3.46687 | opp_overlap 460235 460238, overlap 460233 GTCATATACCAATCA GCTTAGCTAA CAG TTAGCTAAGC TTGCTATTTCAAATT spoT8 461149 - 461754 + | spoT-like ppGpp hydrolase TERM 355 462057 - 462035 - g 71 -8.5 -2.80816 | overlap 462040 TTTTTAGGTACGATA TTAGACGCT GATAT AGCGTCCAA AAAAGAATCAATAGT tnE 461876 - 462826 + | transposase and inactivated derivative TERM 356 466016 - 465980 - g 100 -11.2 -4.42491 | opp_overlap 465985 GAAAAAAGATATAAA TACAATAGCAAGAT GTGCTAATA ATCTTGCTATTGTA GAACATATGTATAAA ank1u4 465327 - 466304 + | ankyrin repeat-containing protein traV 467881 - 467552 - | conjugative transfer protein traB 468258 - 467881 - | conjugative pilus assembly protein TERM 357 468265 - 468281 + r 81 -3.7 -5.64328 | TGCTGCCATTCTTAA CTAGC ACTTTAA GCTAG TTTTATTTTTTTCTT tchB 468487 - 468332 - | hypothetical protein rpsD 470766 - 470143 - | 30S ribosomal protein S4 OTBS_0493 470902 - 471654 + | hypothetical protein TERM 358 471654 - 471635 - f 72 -5 -4.8269 | opp_overlap 471635, overlap 471636 TACAATTATTAAAAA TTATGCAC GTGC GTGCATAG TAATTACGAAGATAT TERM 359 471653 - 471636 - f 73 -8.5 -3.48529 | opp_overlap 471635, overlap 471635 ACAATTATTAAAAAT TATGCAC GTGC GTGCATA GTAATTACGAAGATA OTBS_0495 471837 - 472742 + | ABC transporter permease protein TERM 360 472801 - 472791 - g 76 -5.4 -5.01845 | TATAATAATTAAAAA CCTT TGC AAGG CGTTCAAATCGAAAA mkl 472771 - 473526 + | ribonucleotide ABC transporter ATP-binding protein recJ 475457 - 473697 - | single-stranded-DNA-specific exonuclease TERM 361 474076 - 474111 + g 75 -5 -5.08824 | opp_overlap 474076 TTATGACCAGTTAAA TTTTTTATATCAAG TGCTAATT CTTGATTTAAAAAA TTTTTTAAATCACCA TERM 362 474403 - 474425 + g 77 -4.3 -5.16206 | gap 1, overlap 474408 TGTTCACGAGCTATA GTTACTGCTT CTTC AAGCA-TAAC TTTTTCTATTAATTT TERM 363 474964 - 474983 + g 84 -10.8 -3.1505 | ACATCTATATGCTGT GCTTTAGC TTCA GCTAAAGC TTCATACGCACTAGT yqgF 475944 - 475471 - | Holliday junction resolvase-like protein OTBS_0499 476855 - 475941 - | hypothetical protein TERM 364 476095 - 476085 - G 79 -6.8 -4.65916 | TGGAGCTGAAGAAAA GGCT CCA AGCC TACAGATATCTTTAA TERM 365 476884 - 476864 - R 85 -7.1 -4.93898 | opp_overlap 476864 476863 476868, overlap 476868 ATATCATTATAAAAA TAAATATTA ATT TAATATTTA CTCACTTTCAGGAGG ccmE 477238 - 476882 - | cytochrome c-type biogenesis protein TERM 366 477263 - 477244 - H 80 -2.2 -5.73672 | opp_overlap 477247, overlap 477247 AAATAAGCAAAAAAA CAATTCTA AACC TAGAATTT ATTTTGAAATACATT TERM 367 477604 - 477592 - g 76 -3.5 -5.38958 | opp_overlap 477592, overlap 477586 ATGCATAAACAAAAA TTATA TCG TATAA CTTATGGTAATAGTA TERM 368 478670 - 478653 - g 72 -5.7 -4.43669 | overlap 478648 ACCTAAAAAAGCAAA TCAAATT TACA AATTTGA TAACGTAGTACAAGC qor 477577 - 478740 + | NADP-dependent quinone oxidoreductase TERM 369 478946 - 478928 - T 71 -3.2 -5.28176 | CCTATTGAGAAAAAA TTGTTTTA AGC TAAATCAA GAAGAATGAAATATT tchA 480167 - 479832 - | hypothetical protein TERM 370 480144 - 480177 + g 84 -11.1 -3.08776 | overlap 480141 480146 480149 AATCACCTTCAGCCT CAATTGTAGCATGAG ATTT CTCATGCTACTACTG TGATTTTCAAAAATT TERM 371 480149 - 480172 + g 100 -14 -2.75838 | overlap 480146 480144 480141 CCTTCAGCCTCAATT GTAGCATGAG ATTT CTCATGCTAC TACTGTGATTTTCAA OTBS_0505 483172 - 482873 - | hypothetical protein TERM 372 483269 - 483254 - H 72 -2.6 -5.36965 | TAATACCAGAAAAAA TTAACA AATA TGTCAA AAAAATAGTTAATAT TERM 373 483529 - 483474 - H 100 -14.1 -3.81539 | gap 2, opp_overlap 483474, overlap 483478 ACTGAAATATTCAAA CTTAGTTATTATTGTTTTAGAGATATT ATTT AATATCTCTAAAACAATAATAA--AAG CAATCCTATCCATAG TERM 374 483527 - 483478 - H 100 -18.5 -2.6836 | opp_overlap 483474, overlap 483474 AAATATTCAAACTTA GTTATTATTGTTTTAGAGATATT ATTT AATATCTCTAAAACAATAATAAA AGCAATCCTATCCAT TERM 375 483668 - 483621 - H 100 -16.2 -4.27686 | opp_overlap 483627, overlap 483622 483627 TAAAATTAGTTAAAA TTAAAAGTTATTAATACAATAA ATAT TTATTGTATTAATAACTTTTAC TAAGATAATTGCGTT TERM 376 483667 - 483622 - H 100 -19.7 -3.15527 | opp_overlap 483627, overlap 483621 483627 AAAATTAGTTAAAAT TAAAAGTTATTAATACAATAA ATAT TTATTGTATTAATAACTTTTA CTAAGATAATTGCGT TERM 377 483662 - 483627 - H 100 -15.2 -4.68645 | opp_overlap 483627, overlap 483622 483621 TAGTTAAAATTAAAA GTTATTAATACAATAA ATAT TTATTGTATTAATAAC TTTTACTAAGATAAT TERM 378 483627 - 483662 + H 100 -15.2 -4.2717 | opp_overlap 483627 483622 483621 TAGTTAAAATTAAAA GTTATTAATACAATAA ATAT TTATTGTATTAATAAC TTTTACTAAGATAAT OTBS_0507 484202 - 484381 + | hypothetical protein traE 485917 - 486456 + | conjugative transfer protein tchC 486590 - 486922 + | hypothetical protein TERM 379 487472 - 487507 + T 87 -11.4 -3.02043 | opp_overlap 487480 487481, overlap 487481 TTCAATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGAGCGAAATT TERM 380 487499 - 487480 - T 74 -5 -5.00884 | opp_overlap 487472 487481, overlap 487481 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGA TERM 381 487481 - 487498 + T 85 -8.5 -4.56883 | opp_overlap 487480 487481, overlap 487472 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 382 487498 - 487481 - T 74 -8.5 -3.60048 | opp_overlap 487481 487472, overlap 487480 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 383 487570 - 487588 + T 71 -4.6 -4.82901 | overlap 487572 CCTTTTTTACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA panF 490429 - 489026 - | sodium/pantothenate symporter TERM 384 489378 - 489343 - G 71 -7 -4.1399 | opp_overlap 489322, overlap 489322 CTATGCATATAGAAA TGCTACCACTAATTAT AGTA ATAACTTGTGTTAGCA AAAATGATACAGTTG TERM 385 490140 - 490127 - G 74 -6.7 -4.20918 | opp_overlap 490127 GCCAATGCTAATAAA GCCAT GATG ATGGC TGAATTGAGGTATAA ampG1 491707 - 490445 - | major facilitator superfamily permease TERM 386 490804 - 490792 - G 72 -4.9 -4.75954 | opp_overlap 490790 490792 AAAATCCAAAATAAA TTAGA CCA TCTAA TATTGTTATTTTATG TERM 387 491744 - 491726 - H 83 -9 -4.08557 | opp_overlap 491723 TTCCTCAAATAATAA TGTCTAAA ATA TTTAGACA GCATACTTAAACACA TERM 388 496010 - 495984 - H 83 -3 -5.7946 | TCTCCAACAAAAAAA GCTAAGCTAATC ATG GATGAGGTTAAC CTCAAAATCAAAGAA TERM 389 496258 - 496236 - g 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGATGAAAA CACTAAGCGCTACAT traD_Ti 495996 - 496394 + | conjugative transfer protein rhp4 496482 - 497054 + | hypothetical protein TERM 390 497355 - 497372 + T 81 -2.7 -5.80364 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTATTACCAT OTBS_0523 498676 - 498404 - | hypothetical protein tpr1B7 499596 - 498904 - | TPR repeat-containing protein trbC 501863 - 501543 - | conjugative transfer protein traV 503110 - 502820 - | conjugative transfer protein traB 503574 - 503110 - | conjugative pilus assembly protein tchB 504087 - 503686 - | hypothetical protein tchA 504970 - 504635 - | hypothetical protein TERM 391 507702 - 507726 + r 80 -6.6 -4.8487 | TTTATTTAAATTTTT CTTTATAACT CAACT GGTTATAAAG TTATTTTTTTGCTAC OTBS_0535 508078 - 507893 - | hypothetical protein TERM 392 508107 - 508117 + H 88 -2.6 -6.17033 | opp_overlap 508107 TTAGTTTCATAAAAC TTAT TTG ATAA TTTTTTGTTTTTTTT TERM 393 510423 - 510439 + H 71 -2.3 -5.38951 | overlap 510420 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT TERM 394 511474 - 511490 + H 71 -2.3 -5.38951 | overlap 511471 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT TERM 395 512187 - 512229 + H 87 -8.3 -4.77157 | opp_overlap 512187 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA TERM 396 512229 - 512187 - H 90 -8.3 -4.91657 | opp_overlap 512187 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA TERM 397 512735 - 512751 + H 74 -8.1 -3.54574 | overlap 512732 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG TERM 398 514710 - 514698 - H 70 -6.3 -4.03474 | ATCAAAAACTAAGAA TTGTG AAT CACAA ACAGTGCCATTAATA TERM 399 515470 - 515460 - g 76 -5.4 -4.93547 | opp_overlap 515460 TTAATCAATCAAAAA GCAA AAA TTGC TGCTATATGGCCAAA bcp 515073 - 515543 + | bacterioferritin comigratory protein TERM 400 517076 - 517051 - T 71 -4.7 -4.83615 | overlap 517052 TACGCGGTATAAAAA CGTGGTTTTTG AAAG CAAAAACCGCT TGAACCACCTGCTAT TERM 401 517075 - 517052 - T 73 -8.2 -3.49687 | overlap 517051 ACGCGGTATAAAAAC GTGGTTTTTG AAAG CAAAAACCGC TTGAACCACCTGCTA TERM 402 517188 - 517151 - T 100 -12.3 -3.81146 | opp_overlap 517144 517139 517148 517146, overlap 517174 TTTTGCAAGCAATAA TTGCATTATTGCTAATA ATAA CAGTAGCAATAATGCAA CAATATTTTATAACT TERM 403 517646 - 517675 + T 87 -10.9 -3.43618 | opp_overlap 517648 517652 TTCTTTGATTTTTAA GATCAATCAAGAT ACTT ATCTTGACTGATC TTGTGGATATTAGTT TERM 404 517673 - 517648 - T 77 -9.9 -3.04144 | opp_overlap 517646, overlap 517652 CTTTGATTTTTAAGA TCAATCAAGAT ACTT ATCTTGACTGA TCTTGTGGATATTAG tlc 519172 - 517685 - | ATP/ADP translocase rplI 519841 - 519314 - | 50S ribosomal protein L9 TERM 405 519510 - 519531 + g 83 -8.1 -4.20981 | opp_overlap 519510 519508 519513 GGCTTAATATCAATA TAAGCTTTG ATAT CAGAGCTTA TTTGTAATTTCTTAA rpsR 520192 - 519884 - | 30S ribosomal protein S18 TERM 406 519924 - 519937 + g 74 -5.3 -4.82756 | opp_overlap 519912, overlap 519912 AGAGCAAGCTCTCTA GCAAT TTTA ATTGC TTTTGTTAATTCTCT rpsF 520596 - 520240 - | 30S ribosomal protein S6 TERM 407 520738 - 520774 + H 76 -9.9 -2.63347 | opp_overlap 520746 520764, overlap 520735 520746 CAATATTTATTATTT ATTTATAATTATTTAAA ATT TTTAAATAATTATAAAC TCAGTTATAATTAAG TERM 408 520815 - 520801 - H 75 -7.2 -4.12902 | opp_overlap 520785 520801 520813 520814 TAAGTATCTTTAAAA GTACTT TAA AAGTAC TTGATTTTTTAATCA TERM 409 520801 - 520815 + H 74 -7.2 -3.96447 | opp_overlap 520801, overlap 520785 520813 520814 TAAGTATCTTTAAAA GTACTT TAA AAGTAC TTGATTTTTTAATCA TERM 410 521220 - 521203 - g 72 -5.7 -4.49337 | opp_overlap 521203, overlap 521189 CGATAATGTAGAAAA TTATCAA AAAT TTGATAA TGGTTTGATAGAAAT phoB 520889 - 521638 + | PhoB-like response regulator TERM 411 523013 - 523002 - g 74 -3 -5.47159 | opp_overlap 523008, overlap 523005 TGTTAAGAGAAAAAA TAAC TTTA GTTA CTCAAGAAACTATGC msbA1 521744 - 523414 + | multidrug resistance protein, ABC-type multidrug transport system, ATPase and permease components tig 525405 - 523915 - | FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) dapE 526723 - 525557 - | succinyl-diaminopimelate desuccinylase TERM 412 526670 - 526637 - G 70 -6.1 -4.30833 | TAAATTAGTAATAAA GTCTATTGCACCA TTATCATT TGGTGTAACAGAC TTAAAGCTTATTAAC TERM 413 526859 - 526839 - R 80 -6.3 -4.90266 | overlap 526840 TTCATCAAGCAAAAA CTTATAACA AGA TGTTATAAA GAATTGAAAGATGAA TERM 414 526858 - 526840 - R 71 -7.6 -3.53437 | overlap 526839 TCATCAAGCAAAAAC TTATAACA AGA TGTTATAA AGAATTGAAAGATGA htpG 528778 - 526886 - | heat shock protein 90 TERM 415 528906 - 528889 - H 72 -2.8 -5.34555 | opp_overlap 528889 TCAGATTATAAAAAA TTAAGT ATTATA ACTTAA TTAATAACTACATAT rpmI 529224 - 529430 + | 50S ribosomal protein L35 rplT 529450 - 529815 + | 50S ribosomal protein L20 TERM 416 530241 - 530231 - f 75 -4 -5.18409 | TAAAAGAAAAAGAAA CAAA CAT TTTG TTAGGCTTAAAAACA TERM 417 531847 - 531863 + F 71 -2.3 -5.38951 | overlap 531844 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTBS_0563 534801 - 534980 + | hypothetical protein TERM 418 535086 - 535076 - T 76 -2.6 -5.54264 | overlap 535066 535064 AAATAGTTAAAAAAA TTAA CCA TTAA AGGCATTAAAATTAT TERM 419 535427 - 535443 + T 70 -5.2 -4.60041 | opp_overlap 535427 CTAAGTAATATTGAA GATATC TGTTT GATATC TTTTTCCAAGTAAAT rpsP 536139 - 535813 - | 30S ribosomal protein S16 rpmG 536315 - 536148 - | 50S ribosomal protein L33 TERM 420 536634 - 536666 + H 100 -12.4 -2.84192 | opp_overlap 536639, overlap 536639 TAGGTCATAGCGACA GCAAATTATTATAA AATAG TTATAATAATTTGC TATACTAGTAGTATA TERM 421 540050 - 540066 + G 70 -8.1 -3.1364 | opp_overlap 540050 540049 540046 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCACTAATTGAGTC tnA 539483 - 540244 + | transposase and inactivated derivative OTBS_0570 541228 - 540449 - | hypothetical protein argS 542997 - 541225 - | arginyl-tRNA synthetase iscA 543163 - 543507 + | iron-binding protein IscA/HesB gltX 544968 - 543508 - | glutamyl-tRNA synthetase alaS 547959 - 545284 - | alanyl-tRNA synthetase TERM 422 545554 - 545573 + g 79 -8 -4.05067 | opp_overlap 545553 545554, overlap 545553 AGCTTTTCTAACAAT TTGAAGAT CATA ATCTTCAA TATTTTTGTAAACTA TERM 423 546018 - 545996 - G 74 -6.2 -4.41348 | TTTTCTTCAAACAAA GCAACTGCTC CAT GAGCTATCGC TTGATCAAATGGCAT TERM 424 547372 - 547396 + g 71 -7.8 -3.52896 | overlap 547376 ACCATTTTCATCTTT GGTTCCAGGC AGTCC GCCTGGTATC TTGTCTCCATGATCA TERM 425 547376 - 547392 + g 78 -9.4 -3.23332 | overlap 547372 TTTTCATCTTTGGTT CCAGGC AGTCC GCCTGG TATCTTGTCTCCATG TERM 426 548864 - 548828 - g 75 -9.7 -2.8214 | overlap 548838 ATCAGCAGAATATTA TTTTTAGTAACACAATA CCA TATTGCGCTACTAAAAG CCCTGAGTATATATA OTBS_0575 548086 - 549699 + | hypothetical protein TERM 427 549758 - 549785 + G 86 -9.4 -4.09818 | opp_overlap 549768 TTCAAGATAGTGCTA TATGGTATAATA ATAT TATTATGCCATA TTTATAGTTCATATT OTBS_0576 549701 - 550330 + | hypothetical protein atpG 551213 - 550341 - | H(+)-transporting two-sector ATPase F(1) gamma subunit precursor atpA 552784 - 551246 - | H(+)-transporting two-sector ATPase F(1) alpha subunit TERM 428 552340 - 552312 - G 70 -8.3 -3.13403 | overlap 552310 TGCCCTTTACCAATA GGTATTAAAGC ATCAATA GCCTTAATACC AGTATACATAGGCTC atpH 553372 - 552827 - | H(+)-transporting two-sector ATPase F(1) delta subunit TERM 429 553173 - 553193 + g 75 -4.8 -5.098 | gap 1 TTCAGTCCATATGTA CTTGATAGG TAAT CC-ATCAAG TTTATTTTATTTTTC dut 553913 - 553467 - | deoxyuridine 5'-triphosphate nucleotidohydrolase infC 554768 - 554226 - | translation initiation factor IF-3 thrS 556728 - 554782 - | threonyl-tRNA synthetase folC 556979 - 558319 + | folylpolyglutamate synthase ppiC 559453 - 558422 - | putative peptidylprolyl isomerase secA 559699 - 562341 + | preprotein translocase subunit SecA TERM 430 562628 - 562616 - T 74 -2 -5.58074 | GAAGTAGGAAAAAAA TACA GTATT TGTA TGGACTAAAAACATA invA 567781 - 567296 - | dinucleoside polyphosphate hydrolase TERM 431 568310 - 568294 - R 71 -7.3 -3.80858 | opp_overlap 568279 568294 568290 TCAGAACTTAGTAAA GAGCTAG GTT CTAACTC TATATTGTTCAAAGT TERM 432 569807 - 569817 + r 76 -6.8 -4.38503 | opp_overlap 569807 569805, overlap 569805 CTCAAAAATAAGATA GGCA TTA TGCC TTATTTGTTGTTTAG recF 574196 - 573045 - | recombination protein F ftsQ 575014 - 574202 - | cell division protein TERM 433 574947 - 574972 + g 82 -2.7 -6.01187 | opp_overlap 574944 574954, overlap 574945 574948 574954 TTAATAATAGATCTC CTTAAAGGAAT ATTG ATTCTTTTAAC TTTTTTTGTTTGATT TERM 434 574948 - 574971 + g 70 -6.2 -4.17052 | opp_overlap 574944 574954, overlap 574945 574947 574954 TAATAATAGATCTCC TTAAAGGAAT ATTG ATTCTTTTAA CTTTTTTTGTTTGAT ddl 575900 - 575025 - | D-alanine--D-alanine ligase murB 576888 - 575977 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 435 576255 - 576269 + gr 76 -3.6 -5.35222 | TTGGCTGCGTTAATT TACGAA CTG TTTGTA TTTTTTGTAGCTTTT murC 578365 - 576857 - | UDP-N-acetylmuramate--L-alanine ligase OTBS_0601 579272 - 578541 - | hypothetical protein TERM 436 579440 - 579473 + r 95 -7.5 -6.2845 | opp_overlap 579440 579443 AAAAACTCTGAAAAA GTAGCTAAAAAACCT GCAA AGGACTTTTAGCTGC TTTTTTTTTATAATT TERM 437 579473 - 579440 - R 81 -7.5 -4.67168 | opp_overlap 579440, overlap 579443 AAAAACTCTGAAAAA GTAGCTAAAAAACCT GCAA AGGACTTTTAGCTGC TTTTTTTTTATAATT OTBS_0602 581098 - 579500 - | hypothetical protein TERM 438 580891 - 580909 + g 72 -2.4 -5.47218 | opp_overlap 580871, overlap 580879 580894 CACCAAATGGCAGTC CAGTTGTT AAT GACAAATG TTTTTTTCCCTCAGA TERM 439 581270 - 581281 + H 71 -5.8 -4.49337 | opp_overlap 581269 581270 CTGTGTTAAAAATAT CGCT TCAA AGCG TTTTATCCATTGTAA TERM 440 581789 - 581778 - g 70 -4.4 -4.78753 | overlap 581769 GCAACAGCAATAAAA TTGC TAGG GCAA GCCAAATGGCGTGCA glyQ 581646 - 582524 + | glycyl-tRNA synthetase subunit alpha glyS 582517 - 584568 + | glycyl-tRNA synthetase subunit beta OTBS_0605 584546 - 585514 + | putative translation factor protein TERM 441 586577 - 586535 - T 87 -8.3 -4.77157 | opp_overlap 586535 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 442 586535 - 586577 + T 90 -8.3 -4.91657 | opp_overlap 586535 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT tnE 589877 - 588927 - | transposase and inactivated derivative TERM 443 589696 - 589718 + g 71 -8.5 -2.80816 | overlap 589701 ACTATTGATTCTTTT TTGGACGCT ATATC AGCGTCTAA TATCGTACCTAAAAA TERM 444 590629 - 590671 + H 72 -8 -3.58247 | opp_overlap 590625, overlap 590625 ATTTTCTAAAACACC TACTATAGATGTATTTTTTG AGG TAAAAAATGCGTCTGTAGCA TTCGATTTTTTTAAC TERM 445 591438 - 591422 - H 70 -5.9 -4.30014 | overlap 591423 TTGAGCAACTCAAAA CTGTTTC ACA GAAACAA ATCAATGAAGAAGAG TERM 446 592844 - 592829 - H 77 -7.6 -4.1721 | opp_overlap 592819 ACTCAGAGCTTAAAA GCTCTT GCTA AAGAGC TCAATATTTCAATAA TERM 447 592939 - 592909 - H 70 -4.1 -4.98522 | gap 1, opp_overlap 592909 AAGGTCAGATAAAAA GCCT-ATTCTCTCA GATC TACGAGAATCAGGC TCCATTGAACAAGAT TERM 448 593925 - 593897 - g 73 -7.5 -3.69934 | opp_overlap 593897, overlap 593898 AAATAATATTTGAAA CTCAGCAAGAATT TAT AGCTCTTGCTGAA TACCTTAAACTACCA TERM 449 593924 - 593898 - g 71 -8.8 -2.80876 | opp_overlap 593897, overlap 593897 AATAATATTTGAAAC TCAGCAAGAATT TAT AGCTCTTGCTGA ATACCTTAAACTACC spoT11 593413 - 593988 + | spoT-like ppGpp hydrolase ank1C4 594028 - 594672 + | ankyrin repeat-containing protein rhp6 594775 - 595278 + | putative ompA-like autotransporter dam5 595875 - 595279 - | site-specific DNA adenine methylase TERM 450 595593 - 595583 - G 70 -4 -5.04601 | TCTATAAATGAAAAA TATG TAG CATA AATTGATACACCATG TERM 451 596210 - 596200 - g 70 -4 -4.95758 | ATGATATTAGAAAAA GAAT TCG ATTC AGAAATAGAAATGAA TERM 452 596965 - 596948 - g 76 -8.5 -3.40565 | opp_overlap 596945 AAGCATTAAGATTAA GCTTAAC GTTT GTTAAGC TGATGCTTCAAGAAA hkp10 596185 - 597066 + | putative signal transduction histidine kinase TERM 453 597044 - 597078 + F 100 -9.4 -4.39571 | opp_overlap 597043 597046, overlap 597046 597050 CCATATTTCATATAC CAGTCAGCTTAGCTAA TTG TTAGCTAAGCTTGCTA TTTTAAATTTCTAAA TERM 454 597076 - 597046 - f 76 -9.8 -2.69977 | opp_overlap 597044 597046 597050, overlap 597043 ATATTTCATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 455 597046 - 597076 + F 95 -12 -3.79633 | opp_overlap 597046 597043, overlap 597044 597050 ATATTTCATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 456 597050 - 597072 + F 100 -13.6 -3.55453 | opp_overlap 597046 597043, overlap 597046 597044 TTCATATACCAGTCA GCTTAGCTAA TTG TTAGCTAAGC TTGCTATTTTAAATT hkp11 598133 - 598837 + | putative signal transduction histidine kinase TERM 457 599211 - 599200 - g 70 -4.4 -4.90321 | overlap 599201 599203 AAAAAGAATATAAAA CTAC TAGC GTAG CAAGAATACTTAATT hkp12 598848 - 599795 + | putative signal transduction histidine kinase spoT12 600331 - 600936 + | spoT-like ppGpp hydrolase TERM 458 601239 - 601217 - g 71 -8.5 -2.80816 | overlap 601222 TTTTTAGGTACGATA TTAGACGCT GATAT AGCGTCCAA AAAAGAATCAATAGT tnE 601058 - 601984 + | transposase and inactivated derivative TERM 459 604204 - 604188 - T 82 -6.7 -4.89562 | GTAAAATTAATAAAA TTTTCTA ACT TAGAAAA ATAGTACAGTAAATC rhp4 604820 - 604221 - | hypothetical protein TERM 460 604364 - 604378 + g 72 -5 -4.77165 | opp_overlap 604364, overlap 604377 CATTGGTATCATTAA TGCTAT AAT ATGGCA TTTTATTGTGAAAAA traD_Ti 605290 - 604850 - | conjugative transfer protein TERM 461 605028 - 605050 + g 77 -7.8 -4.13767 | ATGTGGTGCTTAGTG TTTTCGTCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 462 605276 - 605302 + g 81 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA TERM 463 608154 - 608134 - H 100 -11.2 -4.2803 | TATTCGAAGGTAAAA TGAGCTGC ATAGA GCAGCTCA AGGATAATAAAGATA TERM 464 610352 - 610334 - g 72 -2.5 -5.43866 | gap 1 GAATCGTTAAAAAAA TATAG-CG ATAT CGTCTATA AAGTTGCAACCAAAA TERM 465 610380 - 610369 - g 70 -4.4 -4.86621 | opp_overlap 610364 610369 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 466 610369 - 610380 + G 73 -4.4 -5.08878 | opp_overlap 610369, overlap 610364 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 467 610514 - 610488 - g 79 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTATAACGGCA tnE 610166 - 611077 + | transposase and inactivated derivative TERM 468 612282 - 612305 + T 73 -8.2 -3.38674 | overlap 612281 CTTTACTAATGGCAA GCCTCCAAAA CAGA TTTTCGAGGC CTTTTTAGCGCTTTT tpr1B8 613496 - 612834 - | TPR repeat-containing protein TERM 469 614337 - 614315 - R 75 -4.8 -5.06451 | opp_overlap 614318 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAATAGAATCC traN 619144 - 617483 - | conjugative transfer protein TERM 470 618518 - 618501 - G 72 -8.5 -3.14795 | overlap 618499 AAATTTCTACCAATA TGGTGTA TAGA TACACCA AGCCTATTAGCAATA trbC 619487 - 619167 - | conjugative transfer protein traU 620269 - 619568 - | conjugative transfer protein OTBS_0639 621598 - 620783 - | hypothetical protein TERM 471 621647 - 621635 - R 74 -3.4 -5.46657 | TATGTTAACAAAAAA GCTA ATCCA TAGC TAAACAACTATGCTA TERM 472 621665 - 621701 + r 100 -12.7 -3.61715 | opp_overlap 621658 AACAACTATGCTATA GTCATTTTACTTAAA GAGTTGG TTTAAGTAAAATGAC TTCTTGCAAAACCTA traV 623023 - 622871 - | conjugative transfer protein tchC 624934 - 624602 - | hypothetical protein tchB 625558 - 625070 - | hypothetical protein tchA 626442 - 626107 - | hypothetical protein TERM 473 627152 - 627164 + H 72 -6.3 -4.21945 | TTTATGTTTATCTAT TCCTA GTG TAGGA TTTCTGTCTATTAAT TERM 474 628514 - 628495 - H 86 -6.4 -5.4588 | opp_overlap 628495 628498 628506, overlap 628498 TAAAACGATAAAAAA CAGTTGCA TTAT TGCTACTG TTATTATTAGCAATT TERM 475 630568 - 630553 - g 80 -7.6 -4.1721 | opp_overlap 630543 ACTCAGAGCTTAAAA GCTCTT GCTA AAGAGC TCAATATTTCAATAA TERM 476 630663 - 630633 - g 95 -8.5 -4.98522 | gap 1, opp_overlap 630633 AAGGTCAGATAAAAA GCCT-ATTCTCTCA GATC TAAGAGAATCAGGC TCAATTGAACAGGAC dnaB9 629941 - 630909 + | replicative DNA helicase TERM 477 631259 - 631235 - T 73 -5.9 -4.65838 | GATAGAGTTGAAAAA GCAATATTTTA TGC TAAAACATTAC GTAATAATAAAGCTA TERM 478 631606 - 631596 - T 70 -4 -4.95806 | AAATTAGTATAAAAA TTTG ATT CAAA TAAAGAGAATAATAT TERM 479 633142 - 633172 + T 90 -8.5 -4.98522 | gap 1, opp_overlap 633142 GTCCTGTTCAATTGA GCCTGATTCTCTTA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT TERM 480 633237 - 633252 + T 77 -7.6 -4.1721 | opp_overlap 633249 TTATTGAAATATTGA GCTCTT TAGC AAGAGC TTTTAAGCTCTGAGT TERM 481 634269 - 634285 + T 70 -5.9 -4.3208 | overlap 634270 CTCTTCTTCATTGAT TTGTTTC TGT GAAACAG TTTTGAGTTCTCAAA OTBS_0658 637104 - 636586 - | hypothetical protein TERM 482 637404 - 637416 + H 81 -6.3 -5.10497 | overlap 637414 TTTGATTCTCTTGAT TAGCT TGA AGCTA TTTTTTCAATAGGTT TERM 483 637793 - 637807 + H 77 -8.6 -3.54447 | overlap 637791 GTTTCATCACTACTA TGGCTA ACT TAGCCA TCTTTATACCATCTC TERM 484 639926 - 639938 + H 71 -2 -5.36441 | TATGTTTTTACTTCA TACA AATAC TGTA TTTTTTCTATCACAA TERM 485 640313 - 640303 - H 85 -2.6 -5.88565 | opp_overlap 640303, overlap 640309 TCTATAATAAAAAAA TAAA ACT TTTA CTTGTAAAATAAAAT TERM 486 640959 - 640969 + H 89 -4 -5.86061 | CATAAATATAATTTT GATT GTT AATC TTTTTTTTACTGAAG OTBS_0662 641055 - 642533 + | putative amino acid/peptide transporter fumC 644097 - 642697 - | fumarate hydratase OTBS_0664 644838 - 644161 - | hypothetical protein TERM 487 644462 - 644483 + g 72 -8.9 -2.75844 | opp_overlap 644456, overlap 644461 ATTAGTAATTTACCA GTACTAATA TCAA TATTAGTAC CTTTAACGTGAAAAA TERM 488 648853 - 648843 - H 70 -4 -4.90778 | CTTACTGAAACAAAA TAAC TGC GTTA ACTTTGATAATACAT TERM 489 649394 - 649384 - H 93 -4 -6.24157 | ATCTACAAAAAAAAA TGTT GCT AACA TGATAGAGCAGCTTA OTBS_0671 649915 - 651516 + | hypothetical protein TERM 490 651492 - 651521 + T 74 -8.7 -3.36059 | opp_overlap 651491 651493 651496, overlap 651489 651487 651493 651496 AAATGAAAACGATAC AGAAGCTATAGGA GAAG TTCTATAGCTTCG TCTGTTTATAAATTA TERM 491 651493 - 651520 + T 100 -12.2 -2.60913 | opp_overlap 651491 651493 651496, overlap 651492 651489 651487 651496 AATGAAAACGATACA GAAGCTATAGGA GAAG TTCTATAGCTTC GTCTGTTTATAAATT TERM 492 651520 - 651493 - T 78 -10 -3.12207 | opp_overlap 651493 651492 651489 651487 651496, overlap 651491 651496 AATGAAAACGATACA GAAGCTATAGGA GAAG TTCTATAGCTTC GTCTGTTTATAAATT TERM 493 651496 - 651517 + T 73 -8.1 -3.44444 | opp_overlap 651493 651491 651496, overlap 651493 651492 651489 651487 GAAAACGATACAGAA GCTATAGGA GAAG TTCTATAGC TTCGTCTGTTTATAA grxC 652333 - 651950 - | glutaredoxin TERM 494 652549 - 652561 + r 85 -4.9 -5.55698 | TATTGCCTTAGTTAT TATGA AAG TCATA TTTTTTTGAATTATA OTBS_0674 652969 - 652541 - | hypothetical protein OTBS_0675 653879 - 653067 - | hypothetical protein TERM 495 653307 - 653327 + g 83 -10.5 -3.28924 | opp_overlap 653298 653302 653303 653315, overlap 653303 AGAAAATACAGCTTT GCCATAAGC ATA GTTTATGGC TTGTGGACAACAGTC OTBS_0676 654482 - 653883 - | hypothetical protein OTBS_0677 654900 - 654475 - | hypothetical protein TERM 496 654600 - 654637 + g 70 -7.3 -3.73509 | gap 1 TTATTACTAAATATT TGTT-TTGCTGTTTTTCA ATG TGAGAAGCAGTAATAACA TTTAAAATTTGCTCT TERM 497 654712 - 654696 - G 72 -5.1 -4.78107 | GATCATTAGTAAAAA GAGCTAT GTT AAAGCTC AATTCATAAGTTATT OTBS_0678 655241 - 654900 - | hypothetical protein OTBS_0679 655788 - 655243 - | hypothetical protein OTBS_0680 656937 - 655822 - | phage major capsid protein, HK97 OTBS_0681 657503 - 656949 - | peptidase U35, phage prohead HK97 TERM 498 658829 - 658811 - R 71 -4.6 -4.82901 | overlap 658813 TCCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTAAAAAAGA TERM 499 658927 - 658892 - R 87 -11.4 -3.02043 | opp_overlap 658900 658901, overlap 658901 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA GGGACATATATAGAT TERM 500 658900 - 658919 + r 74 -5 -5.00884 | opp_overlap 658892 658901, overlap 658901 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 501 658918 - 658901 - R 85 -8.5 -4.56883 | opp_overlap 658901 658900, overlap 658892 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 502 658901 - 658918 + r 74 -8.5 -3.60048 | opp_overlap 658892 658901, overlap 658900 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 503 659071 - 659057 - R 85 -3.6 -5.74122 | GACTATATAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 504 659151 - 659125 - R 74 -5.4 -4.96523 | opp_overlap 659125 659128, overlap 659120 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACGAACTTC TERM 505 659304 - 659290 - R 74 -8.6 -3.3375 | overlap 659280 659288 ACTAACACCAGAAGA TGCAGT TGC ACTGCA ACACAAGTCTGATAG lacA 661698 - 661216 - | ribose-5-phosphate isomerase rhp4 662315 - 662001 - | hypothetical protein ank1u5 665486 - 664452 - | ankyrin repeat-containing protein abcT3 669324 - 667543 - | multidrug resistance ABC transporter ATP-binding protein TERM 506 669158 - 669170 + g 75 -4.9 -5.09685 | GGACTATTAGCTATG TTGAT ATA ATCAA TTATTTTTTTTTGCA pyrH 670126 - 669377 - | uridylate kinase mraY 671443 - 670352 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 507 671402 - 671392 - G 72 -2.6 -5.36965 | TAACATTATAAAAAA TATT AGA AATA TAACAGCTATTTATA murF 672848 - 671433 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase TERM 508 672276 - 672261 - G 72 -3.3 -5.28481 | opp_overlap 672261 CAGCGAATTAAAAAA TTCAG TATGGG CTGAA TTAATATTAGTAAGT murE 674314 - 672845 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase pbpA2 676052 - 674301 - | penicillin-binding protein mraW 677493 - 676555 - | S-adenosyl-methyltransferase MraW TERM 509 676959 - 676983 + g 81 -2.2 -6.02914 | CTCTAATTATATTGG CTAATTGCAG AGTAG TTGTAATTGG TTTTTTTTCTCTGGC dnaJ 678695 - 677562 - | chaperone protein TERM 510 677728 - 677746 + g 80 -10.4 -2.7464 | opp_overlap 677731, overlap 677727 TTTCCACAGCGATCA GAATGCAA AAT TTGCATTC CTTTACCACTAAGTT TERM 511 678335 - 678355 + g 79 -6.9 -4.72986 | overlap 678337 ATTTTAAATTAGCTC CAGCTTTTT TAG AAAAAGCAG TTTTTGATGAACGTC TERM 512 678770 - 678736 - R 91 -9.6 -4.24786 | opp_overlap 678739 678747, overlap 678739 TTTATAATATATAAA CAATTTACTAATACTA TAA TAGTATTAGTAAATCT AGTAGTAATTTATTA TERM 513 678767 - 678739 - R 100 -13.5 -4.22858 | opp_overlap 678739 678747, overlap 678736 ATAATATATAAACAA TTTACTAATACTA TAA TAGTATTAGTAAA TCTAGTAGTAATTTA TERM 514 678739 - 678767 + r 100 -13.5 -2.85402 | opp_overlap 678739 678736, overlap 678747 ATAATATATAAACAA TTTACTAATACTA TAA TAGTATTAGTAAA TCTAGTAGTAATTTA dnaK 680711 - 678783 - | chaperone protein bolA 681378 - 681091 - | BolA-like putative stress-induced morphogen fabI 681585 - 682382 + | enoyl-[acyl carrier protein] reductase TERM 515 682797 - 682814 + F 75 -4.9 -5.1523 | opp_overlap 682767 682765 AACAGTTATAATTGT TTAGCTA TGAC TAGCTGA TTTTTCTGTTCTAAA TERM 516 683290 - 683332 + F 84 -9.5 -3.8397 | opp_overlap 683292, overlap 683292 TGTTTACATCATAGT AATAGCTAAACTATTATGA CTGTT TTATAGTAGTTTAGCTATA TTATTGTCAGTATAT TERM 517 683292 - 683330 + F 95 -12.1 -3.4997 | opp_overlap 683292, overlap 683290 TTTACATCATAGTAA TAGCTAAACTATTATGA CTGTT TTATAGTAGTTTAGCTA TATTATTGTCAGTAT rhp7 684094 - 684294 + | hypothetical protein tchA 685790 - 686125 + | hypothetical protein dam6 686949 - 686809 - | site-specific DNA adenine methylase TERM 518 690593 - 690583 - g 71 -6.8 -4.00132 | AAATTTAAAATACAA GCTG TGC CAGC CATAATAGAGCAAGA traW 689989 - 690648 + | conjugative transfer protein tchE 690731 - 690919 + | hypothetical protein trbC 691998 - 692318 + | conjugative transfer protein tpr1B9 694297 - 695271 + | TPR repeat-containing protein TERM 519 695825 - 695800 - f 71 -4.7 -4.77925 | overlap 695801 AAAAAACGCTAAAAA GGCCTCAAAAA TCTG TTTTAGAGGCT TGCCATTAGTAAAGA TERM 520 695824 - 695801 - f 73 -8.2 -3.44315 | overlap 695800 AAAAACGCTAAAAAG GCCTCAAAAA TCTG TTTTAGAGGC TTGCCATTAGTAAAG OTBS_0724 701426 - 701626 + | hypothetical protein TERM 521 702416 - 702432 + F 73 -8.1 -3.46081 | opp_overlap 702416 702415 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCCTTAATTGAGTC TERM 522 702613 - 702629 + F 72 -2.9 -5.40072 | overlap 702614 CTCCTTATCCTAAAT TGGCGTT TAA AAAGCCG TTTTTTTGCAGGGAA OTBS_0726 702947 - 704683 + | hypothetical protein TERM 523 704750 - 704764 + F 72 -8.6 -2.90029 | overlap 704749 AAAAATACATTATCG CTACTG TCA CAGTAG ATTATATTTACCTCA TERM 524 705566 - 705538 - f 91 -5.3 -5.7946 | TCTCCAACAAAAAAA GGCTAAGCTAATC ATG GATGAGGTTAACC TCAAAATCAAAGAAC TERM 525 705814 - 705792 - f 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGACGAAAA CACTAAGCACCACAT rhp4 706053 - 706598 + | hypothetical protein spoT15 707259 - 706666 - | spoT-like ppGpp hydrolase TERM 526 706747 - 706775 + g 73 -7.5 -3.66095 | opp_overlap 706743, overlap 706748 TGGTAATTTAAGATA TTCAGCAAGAGGT ATA AATTCTTGCTGAG TTTCAATAACGATTT TERM 527 706748 - 706774 + g 71 -8.8 -2.79175 | opp_overlap 706743, overlap 706747 GGTAATTTAAGATAT TCAGCAAGAGGT ATA AATTCTTGCTGA GTTTCAATAACGATT TERM 528 706899 - 706916 + g 79 -2.7 -5.89921 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTATTATCCT TERM 529 707551 - 707561 + r 70 -5.4 -4.62984 | opp_overlap 707551 707549 ACCAACTCAAAATCA GCTA ATT TAGC TTTTATATCTCCTAA hkp15 708983 - 708156 - | putative signal transduction histidine kinase TERM 530 709256 - 709229 - H 76 -5 -5.1287 | gap 1, opp_overlap 709248, overlap 709235 709248 TTTACACCGAAAAAA GCAAAATCTCATT CAA AATGAGA-TATGC AATTTATCTCTGTAT TERM 531 709251 - 709235 - H 90 -8.1 -4.86862 | opp_overlap 709248, overlap 709229 709248 CCGAAAAAAGCAAAA TCTCATT CAA AATGAGA TATGCAATTTATCTC TERM 532 710166 - 710200 + G 71 -8 -3.28637 | overlap 710168 710175 710177 AACTTATATAGACTT TAGTACTGTTAGTACT GTT AGTACTGTTAGTACTG TTAGTACTGTTAATG TERM 533 710168 - 710198 + G 71 -8.4 -3.20307 | overlap 710166 710175 710177 CTTATATAGACTTTA GTACTGTTAGTACT GTT AGTACTGTTAGTAC TGTTAGTACTGTTAA TERM 534 710175 - 710209 + G 71 -8 -3.28637 | overlap 710168 710166 710177 AGACTTTAGTACTGT TAGTACTGTTAGTACT GTT AGTACTGTTAGTACTG TTAATGCTGTTGATA TERM 535 710177 - 710207 + G 71 -8.4 -3.20307 | overlap 710168 710166 710175 ACTTTAGTACTGTTA GTACTGTTAGTACT GTT AGTACTGTTAGTAC TGTTAATGCTGTTGA OTBS_0732 709675 - 711579 + | hypothetical protein TERM 536 712018 - 712042 + T 71 -6.6 -3.95584 | GGCTTTAAGGCTTAT TTTCTACTAT AATTC ATAGTAGAGA TTTAATTAATCAAAA rhp6 713371 - 712997 - | putative ompA-like autotransporter TERM 537 714715 - 714692 - R 70 -5.4 -4.60487 | opp_overlap 714690 714692 CACCATTTTCAAAAA GTATACAACA TAAC TGTTTTATAC TGTTTTAGCTATATA TERM 538 715100 - 715113 + r 73 -3.9 -5.31091 | CTAGCTTCCTTTTGT GTTAT TGCT ATAAC TTTTATTTTATTATA atpC 715585 - 715181 - | ATP synthase epsilon chain atpD 717018 - 715582 - | F0F1 ATP synthase subunit beta TERM 539 715648 - 715637 - G 74 -5.8 -4.7078 | CCAACCATGTAAAAA GCCA TTTC TGGC AAATCATCATATTTT OTBS_0740 718519 - 717368 - | glycosyltransferase TERM 540 717843 - 717825 - G 74 -3.8 -5.25699 | opp_overlap 717826 717827, overlap 717826 717827 ATGATACAATAAAAA TCGCAATC CTT GATTGCAT TTAAAGCTTCAATCA TERM 541 717842 - 717826 - G 70 -7.3 -3.73793 | opp_overlap 717826 717827, overlap 717825 717827 TGATACAATAAAAAT CGCAATC CTT GATTGCA TTTAAAGCTTCAATC TERM 542 717841 - 717827 - G 71 -8.6 -2.83191 | opp_overlap 717827 717826, overlap 717826 717825 GATACAATAAAAATC GCAATC CTT GATTGC ATTTAAAGCTTCAAT TERM 543 718999 - 718983 - g 90 -5.1 -5.86609 | overlap 718985 TGAAAAAAATAAAAA CAGTATG ATT CATACAG GATATATTGAATTGG TERM 544 718997 - 718985 - g 74 -6.3 -4.51984 | overlap 718983 AAAAAAATAAAAACA GTATG ATT CATAC AGGATATATTGAATT OTBS_0741 718543 - 719316 + | putative aplha/beta hydrolase mltE1 721703 - 719706 - | putative soluble lytic murein transglycosylase precursor (slt) TERM 545 722055 - 722043 - g 74 -9.1 -3.06696 | opp_overlap 722045 CTTTGGGTGAATACA GCGCA CTG TGCGC AGCTGGTGCTTTATC TERM 546 722637 - 722664 + G 90 -9.4 -4.22375 | gap 1, opp_overlap 722644 CTTTTAAATGTAGTA GCATCAA-TTCAA TAT TTGAAATTGATGC TTTCTTAAATAATAT fabD 721745 - 722683 + | acyl-carrier-protein S-malonyltransferase TERM 547 722730 - 722717 - T 72 -2.5 -5.37345 | TTGAAGCATAAAAAA TTATA TTGC TATAA CTTAAACTTATGCAA TERM 548 725454 - 725465 + T 71 -3 -5.31877 | ATAAATTATGCTTTT TTTG ATAT CAAA TTTTTTATACTAAAT rhp7 725697 - 725551 - | hypothetical protein tnA 728891 - 728016 - | transposase and inactivated derivative hkp16 729183 - 729647 + | putative signal transduction histidine kinase spoT16 730183 - 730788 + | spoT-like ppGpp hydrolase TERM 549 731091 - 731069 - g 71 -8.5 -2.80816 | overlap 731074 TTTTTAGGTACGATA TTAGACGCT GATAT AGCGTCCAA AAAAGAATCAATAGT tnE 730910 - 731836 + | transposase and inactivated derivative tpr1B10 737169 - 734395 - | TPR and ankyrin repeat-containing protein TERM 550 736625 - 736651 + g 85 -11 -3.1855 | opp_overlap 736624, overlap 736628 GTTGTATATATACAT TGATGAGATTGA ATG TCAATCTCATCC TTCCATATTGCAACA TERM 551 736628 - 736648 + g 86 -11.3 -2.7898 | opp_overlap 736624, overlap 736625 GTATATATACATTGA TGAGATTGA ATG TCAATCTCA TCCTTCCATATTGCA TERM 552 737667 - 737688 + H 74 -3.1 -5.40072 | CTGTAGCTAGACCAC TATAAAACA GTTA TGTTATATA TTTTTTTGAAAAGCA trpS 739629 - 740636 + | tryptophanyl-tRNA synthetase OTBS_0765 742649 - 742849 + | hypothetical protein TERM 553 742967 - 742990 + F 70 -5.4 -4.57073 | opp_overlap 742967 TATATAGCTAAACCA GTATAAAACA GTTA TGTTATATAC TTTTTGAAAAGCGTG ppdK 743709 - 746414 + | pyruvate phosphate dikinase OTBS_0769 748824 - 748150 - | hypothetical protein OTBS_0770 748942 - 749133 + | hypothetical protein OTBS_0771 750181 - 750909 + | F0F1 ATP synthase subunit A TERM 554 750913 - 750931 + F 72 -7.6 -3.64822 | opp_overlap 750913 AATTTACATTGAAAA TATAGTAT GTA ATACTATA TTTAAATAACAAAAT TERM 555 750931 - 750913 - f 79 -7.6 -4.24606 | opp_overlap 750913 AATTTACATTGAAAA TATAGTAT GTA ATACTATA TTTAAATAACAAAAT OTBS_0772 750965 - 751189 + | F0F1 ATP synthase subunit C OTBS_0773 751197 - 751694 + | ATP synthase subunit B TERM 556 751909 - 751898 - g 71 -3 -5.186 | CAAAACATAGAAAAA TAAC TACA GTTA CCCAAGCGCAAAAGA OTBS_0774 751849 - 752172 + | hypothetical protein TERM 557 754426 - 754410 - T 71 -2.3 -5.38951 | overlap 754417 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA ftsK 757206 - 754918 - | cell division protein FtsK TERM 558 756014 - 756039 + g 71 -7 -3.96291 | opp_overlap 756014, overlap 756036 GGCTCCCCGCTTAAA TCTTTACCAA GGATAA TTGGTAGAGA TTTATCAGATTTCTG OTBS_0780 757668 - 757297 - | hypothetical protein TERM 559 757393 - 757403 + g 80 -5.4 -5.28176 | ATGATATGTTTCTCC TTGC TCT GCAA TTTTTTGTAGATAAA abcT1 759368 - 757701 - | putative ABC transporter ATP-binding protein TERM 560 758353 - 758341 - G 74 -6.3 -4.35926 | opp_overlap 758325 ATTTTAAAGCTAAAA TCTTG TAG CAAGA CTCGAGAGTTAAAAC TERM 561 759460 - 759429 - R 100 -10.4 -4.94972 | opp_overlap 759429 TATTATAACTAAAAA TAATCATATTGCTA TAAA TGGCAATATGATTA TTTTTAGTTAAATTT TERM 562 759429 - 759460 + r 100 -12.6 -4.90917 | opp_overlap 759429 TATTATAACTAAAAA TAATCATATTGCTA TAAA TGGCAATATGATTA TTTTTAGTTAAATTT OTBS_0782 760342 - 759509 - | hypothetical protein TERM 563 763659 - 763648 - g 74 -3 -5.34555 | GCATAGGAGAAAAAA CTAA TGAT TTAG AGGAATTTCATCCAG TERM 564 763922 - 763900 - g 77 -7.9 -4.10429 | AACTATTGCCGAAAA TTGATCAAA ATCCA TTTGATCAA AACAGTGTAAAGTTA ffh 762807 - 764159 + | signal recognition particle protein cutA 764215 - 764571 + | periplasmic divalent cation tolerance protein TERM 565 765382 - 765372 - g 93 -6.8 -5.38047 | opp_overlap 765372 765371 CATCCAGACAAAAAA CCAG GGC CTGG ATTTATTGAGAAACT TERM 566 766004 - 765992 - g 87 -2.7 -6.47325 | AAAAAATAAAAAAAA TCCTA AAT TAGAA GGTATGGCAAGTAGC OTBS_0787 765324 - 766154 + | hypothetical protein TERM 567 766196 - 766226 + F 85 -11.4 -2.87252 | opp_overlap 766198 766200, overlap 766193 766198 766200 ACATTACATTTTACA CATATAAAAGCTAA TTT TGAGCTTTTATATG TAATTGCTCTTCTTA gmpk 766361 - 767026 + | guanylate kinase OTBS_0789 767160 - 767534 + | hypothetical protein OTBS_0790 767525 - 769804 + | hypothetical protein TERM 568 769844 - 769877 + F 79 -9.1 -3.51778 | opp_overlap 769843 769844 769846, overlap 769843 TAAGCTCTTGAAAAT TAGGTTGTATAAAGA AAAA TTTTAATACAACCTA TATTTAGTCTGATAA TERM 569 770299 - 770281 - f 74 -3.2 -5.35459 | ATAGATTACAAAAAA CTAGAATA AAT TATTATAG AAAACTACTAGTGTA TERM 570 770892 - 770872 - f 100 -9.1 -5.35222 | AAAACTTATAAAAAA TTTTCAGCG TTT CACTGAAAA AGAAAAAAAAGAAGA TERM 571 770921 - 770903 - f 100 -2.4 -6.4275 | GAAAAAGAAAAAAAA GAAGAAAA AAT TGTCCTTC TACAACAAAAAAATT TERM 572 770976 - 770957 - f 90 -10.8 -3.65581 | opp_overlap 770965 ATCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT TERM 573 771285 - 771271 - f 74 -8.6 -3.25459 | opp_overlap 771268 771264, overlap 771269 ACTAACGCCAGAAGA TGCAGT TAT ACTGCA ACGTATGTCTAGTAG TERM 574 771864 - 771848 - f 71 -7.3 -3.80858 | opp_overlap 771833 771848 771844 TCAGAACTTAGTAAA GAGCTAG GTT CTAACTC TATATTGTTCAAAGT TERM 575 772593 - 772569 - f 81 -7.3 -4.65838 | GATAGAGTTGAAAAA GCAATACTTTA CGC TAAAACATTGC CTACTAATAAAGCTA TERM 576 775542 - 775566 + F 71 -7.3 -3.76835 | opp_overlap 775542 775545 775549, overlap 775545 CTTGCTCTCAAGTCA GAATTCATTGT AAA ACAATCAATTC TTCTATGTTGTTCAA TERM 577 776200 - 776220 + F 100 -11.2 -4.2803 | TATCTTTATTATCCT TGAGCTGC TCTAT GCAGCTCA TTTTACCTTCGAATA TERM 578 779069 - 779043 - f 83 -3 -5.7946 | TCTCCAACAAAAAAA GCTAAGCTAATC ATG GATGAGGTTAAC CTCAAAATCAAAGAA TERM 579 779317 - 779295 - g 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGATGAAAA CACTAAGCGCTACAT traD_Ti 779055 - 779453 + | conjugative transfer protein TERM 580 779837 - 779825 - g 75 -4.9 -5.04868 | CCAAAGCAAACAAAA TGTAT TAT ATACA CAAGTAAGTTTTACT rhp4 779541 - 780119 + | hypothetical protein spoT18 780772 - 780197 - | spoT-like ppGpp hydrolase TERM 581 782748 - 782764 + r 70 -5.9 -4.30014 | overlap 782749 CTCTTCTTCATTGAT TTGTTTC TGT GAAACAG TTTTGAGTTGCTCAA TERM 582 783391 - 783417 + r 74 -5.4 -4.96523 | opp_overlap 783391 783403 GAAGTCCGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTATTCTTCATTT TERM 583 783513 - 783548 + r 87 -11.4 -3.02043 | opp_overlap 783521 783522, overlap 783522 ATCTATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGGACGAAATT TERM 584 783540 - 783521 - R 74 -5 -5.00884 | opp_overlap 783513 783522, overlap 783522 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGG TERM 585 783522 - 783539 + r 85 -8.5 -4.56883 | opp_overlap 783521 783522, overlap 783513 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 586 783539 - 783522 - R 74 -8.5 -3.60048 | opp_overlap 783522 783513, overlap 783521 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 587 783611 - 783629 + r 71 -4.6 -4.82901 | overlap 783613 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGAA OTBS_0803 784326 - 784108 - | hypothetical protein OTBS_0805 786689 - 785940 - | putative sulfurtransferase OTBS_0806 787437 - 786802 - | hypothetical protein OTBS_0809 788108 - 788533 + | hypothetical protein TERM 588 788982 - 788965 - T 71 -2.1 -5.4251 | CTCATATACAAAAAA TATTCAA GAAA TTAAATA TTACATATAAAAAAG OTBS_0811 790856 - 789696 - | hypothetical protein TERM 589 790009 - 789986 - G 71 -8.2 -3.37091 | opp_overlap 789985 789982, overlap 789981 789988 AGCTCCAAAAGTCAA CATGTGCTGA CAAG TCAGCACATC CTAAATTTTCTAATA TERM 590 790007 - 789988 - G 85 -10.8 -3.25113 | opp_overlap 789985 789982, overlap 789981 789986 CTCCAAAAGTCAACA TGTGCTGA CAAG TCAGCACA TCCTAAATTTTCTAA TERM 591 791769 - 791758 - H 72 -4.4 -5.07053 | AAGCAGGTGAAAAAA GAGA AATA TCTC AGGGTGGACCACTAT TERM 592 793257 - 793288 + H 72 -7.6 -3.5882 | gap 1, opp_overlap 793257 793259 793264, overlap 793258 793259 793264 ATTTAACTTTTTAAA TAT-GAAAGGTATGT AAT ATATACCTTTCAATA TTTAAGACTACTGTG TERM 593 793258 - 793286 + H 72 -8.3 -3.36991 | opp_overlap 793257 793259 793264, overlap 793257 793259 793264 TTTAACTTTTTAAAT ATGAAAGGTATGT AAT ATATACCTTTCAA TATTTAAGACTACTG TERM 594 793259 - 793285 + H 89 -11.8 -2.61873 | opp_overlap 793257 793259 793264, overlap 793258 793257 793264 TTAACTTTTTAAATA TGAAAGGTATGT AAT ATATACCTTTCA ATATTTAAGACTACT TERM 595 793285 - 793259 - H 80 -9.6 -3.36569 | opp_overlap 793259 793258 793257 793264, overlap 793257 793264 TTAACTTTTTAAATA TGAAAGGTATGT AAT ATATACCTTTCA ATATTTAAGACTACT TERM 596 793856 - 793836 - H 100 -9.1 -5.08011 | AAAACTTCTAAAAAA TTTTCAGCG TTT CACTGAAAA AGAAAAAAAAGAAGA TERM 597 793885 - 793867 - H 100 -2.4 -6.4275 | overlap 793876 GAAAAAGAAAAAAAA GAAGAAAA AGT TGTCCTTC TACAACAAAAAAATT TERM 598 793891 - 793876 - H 78 -3.3 -5.54403 | overlap 793867 AAAAAAGAAGAAAAA GTTGT CCTTCT ACAAC AAAAAAATTTTCACA TERM 599 793940 - 793921 - H 90 -10.8 -3.65581 | opp_overlap 793929 ATCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT TERM 600 794902 - 794886 - H 71 -7.3 -3.80858 | opp_overlap 794871 794882 794886 TCAGAACTTAGTAAA GAGCTAG GTT CTAACTC TATATTGTTCAAAGT TERM 601 795738 - 795766 + H 79 -7.6 -4.32607 | opp_overlap 795740, overlap 795740 AAATTCTGGTTATTA TAGCTAACTTGA ATTTA TTAAGTTAGCTG TTTGTTCACTTTTCC TERM 602 795740 - 795764 + H 74 -8 -3.75005 | opp_overlap 795740, overlap 795738 ATTCTGGTTATTATA GCTAACTTGA ATTTA TTAAGTTAGC TGTTTGTTCACTTTT TERM 603 797434 - 797411 - g 73 -8.3 -3.5275 | opp_overlap 797408 797415, overlap 797415 AAATTATAGAACTAA CAAATGGAA TAGTAC TTCCATTTG ACATTGATTTTTTAA TERM 604 797543 - 797524 - g 79 -7.2 -4.43173 | AAAAATAACCTAAAA GTATTCAG TTTT CCGAATAC ATATCGCCTTCCTAA ank2A4 795886 - 798006 + | ankyrin repeat-containing protein TERM 605 798135 - 798149 + T 81 -3.6 -5.52023 | TTTTTTGCTTATGGA TAGTGT TAA ACATTA TTTTTTCTTGATAAT dam8 799102 - 798296 - | site-specific DNA adenine methylase hkp46 799820 - 800074 + | putative signal transduction histidine kinase TERM 606 801265 - 801255 - g 71 -5.4 -4.68724 | opp_overlap 801255 801253 TTAGGGAATATAAAA GCTA AAT TAGC TGATTTTGACTTGGT hkp18 800151 - 801422 + | putative signal transduction histidine kinase TERM 607 801916 - 801899 - g 79 -2.7 -5.89921 | AGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTCAAACATTTTATA TERM 608 802068 - 802040 - g 73 -7.5 -3.68908 | opp_overlap 802040, overlap 802041 AAATACTCATTGAAA CTCAGCAAGAATT TAT ACCTCTTGCTGAA TACCTTAAATTACCA TERM 609 802067 - 802041 - g 71 -8.8 -2.80622 | opp_overlap 802040, overlap 802040 AATACTCATTGAAAC TCAGCAAGAATT TAT ACCTCTTGCTGA ATACCTTAAATTACC spoT19 801556 - 802125 + | spoT-like ppGpp hydrolase OTBS_0821 802667 - 802149 - | hypothetical protein OTBS_0822 803089 - 802814 - | hypothetical protein TERM 610 803278 - 803300 + r 77 -7.8 -4.13767 | ATGTGGTGCTTAGTG TTTTCGTCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 611 803527 - 803553 + r 83 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA TERM 612 806389 - 806369 - R 100 -11.2 -4.2803 | TATTCGAAGGTAAAA TGAGCTGC ATAGA GCAGCTCA AGGGTAATAAAAATA TERM 613 807047 - 807023 - R 71 -7.3 -3.76835 | opp_overlap 807023 807026 807030, overlap 807026 TTGAACAACATAGAA GAATTGATTGT TTT ACAATGAATTC TGACTTGAGAGCAAG TERM 614 808499 - 808517 + r 74 -6.8 -4.27316 | overlap 808491 AGCCAATCTACGCCG TAGTATGT GTG ACGTACTA TTTTCAGTTAAAACA TERM 615 808862 - 808852 - R 74 -3.2 -5.48028 | GAAATAAAAAGAAAA GCAA CTG CTGC ACTAGTTCATTTTAT TERM 616 808979 - 808959 - R 70 -6.3 -4.10552 | overlap 808957 808963 808970 AATAGCACAAAAAGA TAAAGAAAA TGG CTTTCTTTA CATAAAAGCGTTATT traD_F 810226 - 809270 - | conjugative transfer protein trbC 814557 - 814237 - | conjugative transfer protein traV 815804 - 815514 - | conjugative transfer protein traB 816268 - 815804 - | conjugative pilus assembly protein tchB 816781 - 816380 - | hypothetical protein tchA 817664 - 817329 - | hypothetical protein int 819034 - 817790 - | phage-related integrase rhp7 819359 - 819159 - | hypothetical protein TERM 617 819391 - 819406 + r 71 -4.8 -4.80959 | opp_overlap 819391 CTATAAAGTATAGAA GTTAAT AAAA ATTAAC TTTTCTTCTCCCTTA OTBS_0841 823095 - 819658 - | Na+/proline symporter/histidine kinase/response regualator receivor domain-containing protein TERM 618 822309 - 822299 - G 74 -6.8 -4.15833 | AGCATGACTTTAAAA GCAG TAG CTGC TTGCACTGTACTGCG TERM 619 823215 - 823255 + r 91 -11 -3.81339 | gap 1, opp_overlap 823217 823219 TAAATCTTTTTTTAA TATATTATATCACTTAATT AATT AATTA-GTGATATAATATA TTTGCATTGTCAATA TERM 620 823253 - 823217 - R 75 -9.2 -3.02043 | gap 1, opp_overlap 823215, overlap 823219 AATCTTTTTTTAATA TATTATATCACTTAATT AATT AATTA-GTGATATAATA TATTTGCATTGTCAA icd 825293 - 823734 - | isocitrate dehydrogenase TERM 621 825624 - 825610 - g 72 -2.8 -5.49568 | AATTCAAAATAAAAA CCTTTA TGA TATAGG AGGTAAAGGGCTATT hemC 825467 - 826363 + | porphobilinogen deaminase TERM 622 827358 - 827339 - g 84 -10.8 -3.14602 | opp_overlap 827316 827310 827338 827337 827352, overlap 827310 827337 827352 TGGAGGTTACTAATA CCCTGTAT AATT ATACAGGG ATGTATTGGTGCTAT TERM 623 827375 - 827391 + G 88 -6.7 -5.14477 | TGTATTGGTGCTATT TATAGTT TTC AACTATA TTTTTTCCCTGTATA TERM 624 827777 - 827819 + G 74 -6.4 -4.50841 | opp_overlap 827780 827797 CAAATATGTGCTATA TCAGCATTAGCATATAATAA GGC TAATTTTTTGCCAATGCTGA TTTTAATCTTATTAT proP 826664 - 827884 + | proline/betaine transporter TERM 625 828322 - 828306 - f 77 -4.5 -5.27206 | TACATATAAGAAAAA CTTTAAA ACA TCTAAAG TCAAAAAAGAAGAGA TERM 626 831148 - 831132 - f 74 -9.5 -2.8805 | opp_overlap 831132, overlap 831145 ACCAGTTTCGACAGA GGTCTAT TAT ATAGACC TTGCTTAGGCCGATT TERM 627 831132 - 831148 + F 78 -9.5 -3.34192 | opp_overlap 831132 831145 ACCAGTTTCGACAGA GGTCTAT TAT ATAGACC TTGCTTAGGCCGATT rhp9 832139 - 833761 + | putative RNA-binding protein TERM 628 834823 - 834837 + G 72 -5.8 -4.37092 | opp_overlap 834823 TCAAGCGGTCATACA TTTCTT TTA AAGAAA TTTTATAAAAAAGAT rhp2 834316 - 836184 + | hypothetical protein tdcB 837764 - 836751 - | threonine dehydratase TERM 629 837176 - 837211 + g 74 -9.2 -3.16475 | opp_overlap 837182, overlap 837182 837185 TTACTGGTTCAGATC CTATAATTTGAACTGA AGTA TCAGTTCTAATTTTAG TTAGGTATGTGCCTG TERM 630 837182 - 837205 + g 78 -6.8 -4.44548 | opp_overlap 837182, overlap 837176 837185 GTTCAGATCCTATAA TTTGAACTGA AGTA TCAGTTCTAA TTTTAGTTAGGTATG TERM 631 837185 - 837202 + g 74 -8.5 -3.1867 | opp_overlap 837182, overlap 837182 837176 CAGATCCTATAATTT GAACTGA AGTA TCAGTTC TAATTTTAGTTAGGT TERM 632 838404 - 838422 + G 85 -10.4 -3.51934 | overlap 838402 838419 TAGTTAACGCTTTAG CTGCAAAT TTA ATTTGCAG TGTTTCTAACAAGCA lon 837881 - 840241 + | ATP-dependent protease La OTBS_0856 840968 - 840318 - | hypothetical protein comF 841847 - 841098 - | competence protein F miaA 842865 - 841828 - | tRNA delta(2)-isopentenylpyrophosphate transferase rnhB 842936 - 843553 + | ribonuclease HII OTBS_0860 844116 - 844367 + | hypothetical protein TERM 633 844762 - 844751 - T 71 -3 -5.33785 | AATTAGTATAAAAAA TTTG ATAT CAAA AAAAAGCATAATTTA TERM 634 847157 - 847183 + T 85 -10.4 -3.57144 | opp_overlap 847157, overlap 847164 TTAAGTAGCAAAAAA TATAAAAGCTAG AAA TTAGCTTTTATA TTTAAAGATCCAACA TERM 635 847183 - 847157 - T 100 -9.7 -5.2189 | opp_overlap 847157 847164 TTAAGTAGCAAAAAA TATAAAAGCTA GAAAT TAGCTTTTATA TTTAAAGATCCAACA rhp8 849114 - 847165 - | ompA-like, putative autotransporter TERM 636 847331 - 847359 + g 71 -5.3 -4.71186 | opp_overlap 847331 TTAATATCCACAGTA CTAGAGTTTGATG AAG CAACATATTCTAG TTTTATATTACTACT ank2A5 854418 - 852262 - | ankyrin repeat-containing protein TERM 637 852725 - 852744 + g 79 -7.2 -4.43173 | TTAGGAAGGCGATAT GTATTCGG AAAA CTGAATAC TTTTAGGTTATTTTT TERM 638 852834 - 852857 + g 73 -8.3 -3.5275 | opp_overlap 852831 852838, overlap 852838 TTAAAAAATCAATGT CAAATGGAA GTACTA TTCCATTTG TTAGTTCTATAATTT TERM 639 854563 - 854535 - R 79 -7.6 -4.32607 | opp_overlap 854537, overlap 854537 GGAAAAGTGAACAAA CAGCTAACTTAA TAAAT TCAAGTTAGCTA TAATAACCAGAATTT TERM 640 854561 - 854537 - R 74 -8 -3.75005 | opp_overlap 854537, overlap 854535 AAAAGTGAACAAACA GCTAACTTAA TAAAT TCAAGTTAGC TATAATAACCAGAAT TERM 641 855396 - 855412 + r 71 -7.3 -3.80858 | opp_overlap 855392 855396 855399 ACTTTGAACAATATA GAGTTAG AAC CTAGCTC TTTACTAAGTTCTGA TERM 642 855975 - 855989 + r 74 -8.6 -3.3375 | opp_overlap 855972 855968, overlap 855973 855988 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGTGTTAGT TERM 643 856368 - 856387 + r 90 -10.8 -3.65581 | opp_overlap 856354 ATGTAGCTGCAATTT TTTGCAGG TTCA CCTGCAAA TTCTTGCAAATTGAT TERM 644 856423 - 856441 + r 87 -2.4 -6.20267 | AATTTTTTTGTTGTA GAAGGACA ATT TTTTCTTC TTTTTTTCTTTTTCA TERM 645 856451 - 856471 + r 100 -9.1 -5.08011 | TTCTTCTTTTTTTCT TTTTCAGTG GAA CGCTGAAAA TTTTTTAGAAGTTTT TERM 646 856810 - 856791 - R 86 -6.4 -5.4588 | opp_overlap 856791 856794 856802, overlap 856794 TAAAACGATAAAAAA CAGTTGCA TTAT TGCTACTG TTATTATTAGCAATT TERM 647 856967 - 856947 - R 79 -8.4 -3.96148 | TTTTTTTAGCACAAA TGTAGCAA TTTTG TTGCTACA CTCGAAATTTAACGC TERM 648 857056 - 857067 + r 72 -4.4 -5.08878 | opp_overlap 857056, overlap 857051 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 649 857067 - 857056 - R 70 -4.4 -4.86621 | opp_overlap 857056 857051 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 650 857201 - 857175 - R 81 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTATAACGGCA traD_F 858722 - 857766 - | conjugative transfer protein traN 862704 - 861043 - | conjugative transfer protein TERM 651 862078 - 862061 - G 72 -8.5 -3.14795 | overlap 862059 AAATTTCTACCAATA TGGTGTA TAGA TACACCA AGCCTATTAGCAATA trbC 863047 - 862727 - | conjugative transfer protein traV 864294 - 864004 - | conjugative transfer protein traB 864758 - 864294 - | conjugative pilus assembly protein tchB 865271 - 864870 - | hypothetical protein traE 865819 - 865268 - | conjugative transfer protein tchA 866154 - 865819 - | hypothetical protein TERM 652 867976 - 867994 + r 81 -2.5 -5.77853 | gap 1, opp_overlap 867967 867972 CTTAAACTATACATC TATAGACG ATAT CG-CTATA TTTTTTTTAACGATT OTBS_0889 870811 - 870119 - | hypothetical protein TERM 653 870856 - 870840 - H 72 -4.5 -4.90906 | TCATAATATGAAAAA TAAATTC AGT GAACTTA AATTGCATTACAATA TERM 654 874119 - 874093 - H 83 -3 -5.7946 | TCTCCAACAAAAAAA GCTAAGCTAATC ATG GATGAGGTTAAC CTCAAAATCAAAGAA TERM 655 874367 - 874345 - g 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGACGAAAA CACTAAGCACCACAT traD_Ti 874105 - 874503 + | conjugative transfer protein OTBS_0893 875512 - 874577 - | hypothetical protein TERM 656 875985 - 876006 + r 74 -6.1 -4.48073 | opp_overlap 875985, overlap 875982 TTTTTTTGAACCAAA TATTTTATT TAAA AATAAAATA TTGTTGTTTTTTTGA TERM 657 877324 - 877334 + r 70 -4 -4.95758 | TTCATTTCTATTTCT GAAT CGA ATTC TTTTTCTAATATCAT hkp21 878605 - 878054 - | putative signal transduction histidine kinase TERM 658 878848 - 878819 - R 71 -7.3 -3.79633 | gap 1, opp_overlap 878823, overlap 878817 878823 878833 TAGAAATTTAAAATA GCAAGCTTAGCTAA CAA TTAGCTAAGCT-GA TTGGCATATGACATA TERM 659 878823 - 878845 + r 100 -13.6 -2.74563 | opp_overlap 878819 878817 878823 878833 AATTTAAAATAGCAA GCTTAGCTAA CAA TTAGCTAAGC TGATTGGCATATGAC TERM 660 878845 - 878823 - R 100 -13.6 -3.55453 | opp_overlap 878823, overlap 878819 878817 878833 AATTTAAAATAGCAA GCTTAGCTAA CAA TTAGCTAAGC TGATTGGCATATGAC OTBS_0899 879112 - 878840 - | hypothetical protein TERM 661 879055 - 879075 + g 84 -5.6 -5.40873 | GTAACAGTTTTGACT GTATATTT TTATT AAATATAC TTTTATTTTTCTGTT rhp6 880814 - 880284 - | putative ompA-like autotransporter ank1C6 880962 - 880834 - | ankyrin repeat-containing protein TERM 662 881050 - 881085 + r 87 -11.4 -3.01791 | opp_overlap 881058 881059, overlap 881059 ATCTATATATGTCCT TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGAGCGAAAAT TERM 663 881077 - 881058 - R 74 -5 -5.00884 | opp_overlap 881050 881059, overlap 881059 ATGTCCTTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGA TERM 664 881076 - 881059 - R 74 -8.5 -3.60048 | opp_overlap 881050 881059, overlap 881058 TGTCCTTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 665 881059 - 881076 + r 85 -8.5 -4.56883 | opp_overlap 881059 881058, overlap 881050 TGTCCTTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG yhbH 883205 - 882855 - | putative sigma(54) modulation protein TERM 666 884340 - 884314 - g 72 -4.7 -4.74012 | gap 1, opp_overlap 884314 884315 884316 884318, overlap 884316 AGCAGAAAAGGAAAA TATAGCTAAAAA CAAA TTTTTAGCTA-A TGTTAGTCATGAACT TERM 667 884339 - 884316 - g 86 -9.8 -3.96876 | opp_overlap 884315 884314 884316 884318, overlap 884314 CAGAAAAGGAAAATA TAGCTAAAAA CAAA TTTTTAGCTA ATGTTAGTCATGAAC TERM 668 884316 - 884339 + G 74 -9.8 -2.50016 | opp_overlap 884316 884314, overlap 884315 884314 884318 CAGAAAAGGAAAATA TAGCTAAAAA CAAA TTTTTAGCTA ATGTTAGTCATGAAC TERM 669 884725 - 884711 - g 74 -5.8 -4.72029 | opp_overlap 884710 TCTAATTCAATAAAA TTTACT CCT AGTAAA GGTTCTATAACACTT pleC 883451 - 884998 + | PleC-like histidine kinase dnaB14 886020 - 887483 + | replicative DNA helicase TERM 670 887815 - 887846 + T 70 -8.2 -3.21099 | opp_overlap 887815 ATGTTGTAGAGGTAA GGTTTTGAATTTTA TTTA TGCAATTCAAAACC TTAATAGTGCAAGCA ank1B2 889144 - 887972 - | ankyrin repeat-containing protein TERM 671 890768 - 890791 + H 70 -5.4 -4.68506 | opp_overlap 890768 GATATAGCTAAACCA GTATAAAACA GTTA TGTTATATAC TTTTTCAAATTAATT groES 890975 - 891271 + | heat shock chaperonin protein, 10 kD groEL 891344 - 893008 + | heat shock chaperonin protein 60 kD TERM 672 892987 - 893018 + T 75 -9.4 -2.94912 | CGGACATCATGGTGG TATGGGCGGAATGG ATTT CTAATCCGCCCACA TGTCTACCTTCAAAA TERM 673 893799 - 893778 - T 70 -8.9 -2.67903 | opp_overlap 893782, overlap 893780 893782 AAAACAGTTATATTA GATACTTTT CGAA AAAAGTATC TAGATCATAGTGATA acpS 894554 - 894159 - | 4'-phosphopantetheinyl transferase spoT21 896700 - 894565 - | spoT-like bifunctional ppGpp synthetase/hydrolase TERM 674 894675 - 894691 + g 73 -8.1 -3.38604 | CTATTATTATTTGAG TTGTACT CTG AGTACAA TTAGTAGTTTTGATA OTBS_0920 897116 - 896718 - | hypothetical protein OTBS_0921 897471 - 898211 + | hypothetical protein OTBS_0922 898385 - 898714 + | hypothetical protein OTBS_0923 898737 - 899114 + | hypothetical protein obgE 899134 - 900123 + | GTPase ObgE TERM 675 900568 - 900598 + F 74 -6.4 -4.40237 | opp_overlap 900560 900570 900574, overlap 900570 900574 AAACTGAGCTGAACC AACAAATAATATTG CAA TAATATTATTTGTG TTTTAGTATATAATG TERM 676 900596 - 900570 - f 72 -8.3 -3.35992 | opp_overlap 900568 900570 900574, overlap 900574 ACTGAGCTGAACCAA CAAATAATATT GCAAT AATATTATTTG TGTTTTAGTATATAA TERM 677 900570 - 900596 + F 80 -9 -3.79993 | opp_overlap 900570 900574, overlap 900568 900574 ACTGAGCTGAACCAA CAAATAATATTG CAA TAATATTATTTG TGTTTTAGTATATAA TERM 678 900698 - 900722 + G 72 -9.3 -2.71322 | overlap 900696 900702 ATTATTTTGGTGCTT TTTGGGGCAGG GCG CTTGCCTCAAG TAATGTCTGACTTAG tatA 900644 - 900802 + | twin argininte translocase protein A OTBS_0926 901751 - 901227 - | hypothetical protein TERM 679 903200 - 903182 - R 71 -4.6 -4.82901 | overlap 903184 TCCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTAAAAAAGA TERM 680 904020 - 904062 + r 87 -8.3 -4.77157 | opp_overlap 904020 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA TERM 681 904062 - 904020 - R 90 -8.3 -4.91657 | opp_overlap 904020 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA tnD 905022 - 904060 - | transposase and inactivated derivative TERM 682 904568 - 904584 + g 73 -8.1 -3.54574 | overlap 904565 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG ank1D2 908653 - 907472 - | ankyrin repeat-containing protein TERM 683 908707 - 908687 - R 70 -4.1 -4.90002 | opp_overlap 908689, overlap 908677 908689 908702 TAATATATAATAAAA CATACACAT AAA ATGTATATA TTTATTATATATTAA trbC 910828 - 910508 - | conjugative transfer protein traV 912075 - 911785 - | conjugative transfer protein traB 912539 - 912075 - | conjugative pilus assembly protein tchB 913052 - 912651 - | hypothetical protein traE 913600 - 913049 - | conjugative transfer protein tchA 913935 - 913600 - | hypothetical protein int 915305 - 914061 - | phage-related integrase rhp7 915630 - 915430 - | hypothetical protein TERM 684 915662 - 915677 + r 71 -4.8 -4.80959 | opp_overlap 915662 CTATAAAGTATAGAA GTTAAT AAAA ATTAAC TTTTCTTCTCCCTTA TERM 685 916152 - 916187 + r 90 -12 -2.93357 | opp_overlap 916152 916154, overlap 916149 916154 AAATAAGCCTTAAGA GAGTATAGGTGAGTGC GAGA GAGCTTACCTATACTC TAGTTTCCAATGCTT TERM 686 916154 - 916185 + r 72 -8.8 -3.01497 | opp_overlap 916154 916152, overlap 916152 916149 ATAAGCCTTAAGAGA GTATAGGTGAGTGC GAGA GAGCTTACCTATAC TCTAGTTTCCAATGC OTBS_0945 916877 - 916176 - | hypothetical protein OTBS_0946 917682 - 916897 - | hypothetical protein efp 918248 - 917679 - | elongation factor P TERM 687 917901 - 917916 + g 74 -6.2 -4.4648 | ATCTTTATAAGTTTC TACAGT AACA ACTGTA TTTTCTAGTAAGAAT TERM 688 919436 - 919422 - g 86 -7.2 -4.91084 | AACAAAACCTAAAAA TGCTTT AGT AAAGCA ATATCAGAAACTTTT clpX 918454 - 919707 + | ATP-dependent protease ATP-binding subunit proS 921136 - 919835 - | prolyl-tRNA synthetase TERM 689 920929 - 920950 + g 71 -8.7 -2.80016 | overlap 920928 GAATGCATGGCATTA GCAGCTCGG TGCA TTGAGCTGC ATTCATATTTTTTCT OTBS_0950 921443 - 921150 - | hypothetical protein OTBS_0951 922678 - 921467 - | phosphoglycerate kinase gap 923776 - 922760 - | glyceraldehyde-3-phosphate dehydrogenase TERM 690 923951 - 923963 + H 90 -4.9 -5.72053 | ACGTAGTAACATTGC TGTAA TAT TTACA TTTTTTATTTAATTC TERM 691 925695 - 925717 + G 76 -6.4 -4.67038 | CCACCTGAATCACGT TCTTTGATTA AAA TTATCAAAGA TTTTAATTTTAAGGA virB4-2 924051 - 926504 + | virB4 protein precursor TERM 692 930012 - 929996 - g 82 -9.5 -3.6502 | GATGTCTTAGTTAAA TCACCTT ATG AAGGTGA TGGCAAAACAAGATT OTBS_0954 926504 - 931030 + | hypothetical protein TERM 693 932818 - 932808 - f 75 -4 -5.25803 | AATTGGTATAAAAAA TTTG ATT CAAA TAAAAAGCATAATGC TERM 694 934550 - 934569 + F 86 -6.4 -5.4588 | opp_overlap 934537 934550 AATTGCTAATAATAA CAGTAGCA ATAA TGCAACTG TTTTTTATCGTTTTA TERM 695 934909 - 934889 - f 75 -4.8 -5.08011 | AAAACTTCTAAAAAA TTTTCAGC GTTTT ACTGAAAA AGAAAAAAAGAAGAA TERM 696 934937 - 934919 - f 87 -2.4 -6.20267 | TGAAAAAGAAAAAAA GAAGAAAA AAT TGTCCTTC TACAACAAAAAAATT TERM 697 934992 - 934973 - f 90 -10.8 -3.65581 | opp_overlap 934981 ATCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT ank1u6 936436 - 937311 + | ankyrin repeat-containing protein TERM 698 938351 - 938337 - f 93 -5.8 -6.09133 | opp_overlap 938337, overlap 938345 TATTTTAAAAAAAAA TGAAAA AAT TTTTCA TAATTATGACAAAAA TERM 699 938364 - 938345 - f 74 -2.2 -5.62552 | opp_overlap 938337 938358, overlap 938337 938358 AAAAAAATGAAAAAA TTTTTCAT AATT ATGACAAA AAGTCATGTACTGAT TERM 700 939969 - 939959 - g 71 -5.4 -4.68724 | opp_overlap 939957 939959 TTAGGGAATATAAAA GCTA AAT TAGC TGATTTTGACTTGGT hkp22 938525 - 940126 + | putative signal transduction histidine kinase TERM 701 940587 - 940570 - g 72 -2.7 -5.33848 | AGGATAATCAAAAAA TCAGTTC TGGA GAAATGA TTCAAACATTTTATA TERM 702 940703 - 940690 - g 71 -3.1 -5.16237 | AACCTTATGAAAAAA GACAA AAAA TCGTC ATTGAAACTCAGCAA spoT22 940227 - 940802 + | spoT-like ppGpp hydrolase rhp4 941458 - 940880 - | hypothetical protein TERM 703 941162 - 941174 + g 75 -4.9 -5.04868 | AGTAAAACTTACTTG TGTAT ATA ATACA TTTTGTTTGCTTTGG traD_Ti 941944 - 941546 - | conjugative transfer protein TERM 704 941682 - 941704 + g 77 -7.8 -4.13767 | ATGTAGCGCTTAGTG TTTTCATCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 705 941930 - 941956 + g 81 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA rhp4 948239 - 947706 - | hypothetical protein TERM 706 948309 - 948254 - H 100 -19.9 -2.5602 | opp_overlap 948259 948259 948266, overlap 948259 948266 948277 948290 TAATTACCTAAGTTA TTTAATTGATAATATATTAATAATT TTATTT AATTATTAATATATTATCAATTAAA TAACAAGAAAATATG TERM 707 948304 - 948259 - H 100 -15.4 -3.10112 | opp_overlap 948259 948259 948266, overlap 948254 948266 948277 948290 ACCTAAGTTATTTAA TTGATAATATATTAATAATT TTATTT AATTATTAATATATTATCAA TTAAATAACAAGAAA TERM 708 948259 - 948304 + H 100 -15.4 -3.05384 | opp_overlap 948259 948254 948266 948277 948290, overlap 948259 948266 ACCTAAGTTATTTAA TTGATAATATATTAATAATT TTATTT AATTATTAATATATTATCAA TTAAATAACAAGAAA TERM 709 948297 - 948266 - H 71 -7.7 -3.4285 | opp_overlap 948259 948259 948266, overlap 948259 948254 948277 948290 TTATTTAATTGATAA TATATTAATAATT TTATTT AATTATTAATATA TTATCAATTAAATAA TERM 710 948266 - 948297 + H 71 -7.7 -3.4285 | opp_overlap 948266 948259 948254 948277 948290, overlap 948259 948259 TTATTTAATTGATAA TATATTAATAATT TTATTT AATTATTAATATA TTATCAATTAAATAA TERM 711 949753 - 949735 - H 81 -2.5 -5.77853 | gap 1 AATCGTTAAAAAAAA TATAG-CG ATAT CGTCTATA AAGTTGCAACCAAAA TERM 712 949781 - 949770 - H 70 -4.4 -4.86621 | opp_overlap 949765 949770 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 713 949770 - 949781 + H 72 -4.4 -5.08878 | opp_overlap 949770, overlap 949765 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 714 949915 - 949889 - H 81 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTATAACGGCA TERM 715 952488 - 952472 - H 74 -8.1 -3.54574 | CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA GGCAATTGCTAATAA TERM 716 952598 - 952575 - H 70 -8.4 -3.11966 | opp_overlap 952570 952575, overlap 952566 952573 952580 AAAAGGTATCCAAGA GATAATATAT AATT ATATATTATC TGTAGTTTCAATTAA TERM 717 953540 - 953505 - H 87 -11.4 -3.02043 | opp_overlap 953513 953514, overlap 953514 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA GGGACATATATAGTC TERM 718 953513 - 953532 + H 74 -5 -5.00884 | opp_overlap 953505 953514, overlap 953514 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 719 953514 - 953531 + H 74 -8.5 -3.60048 | opp_overlap 953514 953505, overlap 953513 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 720 953531 - 953514 - H 85 -8.5 -4.56883 | opp_overlap 953513 953514, overlap 953505 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 721 953683 - 953669 - H 85 -3.6 -5.77988 | AGATATATAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 722 953763 - 953737 - H 74 -5.4 -4.96523 | opp_overlap 953737 953740, overlap 953732 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACAGACTTC TERM 723 954407 - 954391 - H 70 -5.9 -4.30014 | overlap 954392 TTGAGCAACTCAAAA CTGTTTC ACA GAAACAA ATCAATGAAGAAGAG OTBS_0977 956112 - 956657 + | hypothetical protein TERM 724 958463 - 958443 - g 79 -3.3 -5.58454 | GTCAGATGAAAAAAA TTCCCAAGA AGA TATTGAGAA ATATAAAAGAGAATT OTBS_0978 956650 - 963549 + | hypothetical protein TERM 725 965213 - 965236 + T 73 -8.2 -3.38674 | overlap 965212 CTTTACTAATGGCAA GCCTCCAAAA CAGA TTTTCGAGGC CTTTTTAGCGCTTTT TERM 726 965819 - 965797 - T 75 -4.8 -5.06451 | opp_overlap 965800 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAATAGAATCC TERM 727 970001 - 969984 - T 70 -8.5 -3.14795 | overlap 969982 AAATTTCTACCAATA TGGTGTA TAGA TACACCA AGCCTATTAGCAATA trbC 970970 - 970650 - | conjugative transfer protein traV 972217 - 971927 - | conjugative transfer protein traB 972681 - 972217 - | conjugative pilus assembly protein tchB 973194 - 972793 - | hypothetical protein traE 973742 - 973191 - | conjugative transfer protein tchA 974077 - 973742 - | hypothetical protein OTBS_0993 976186 - 976569 + | hypothetical protein TERM 728 976554 - 976570 + T 71 -2.3 -5.38951 | overlap 976551 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTBS_0995 979233 - 977497 - | putative export ATP-binding/permease protein cyaY 979549 - 979217 - | putative iron-binding and oxidizing protein TERM 729 980601 - 980583 - g 85 -8.9 -4.10552 | opp_overlap 980583 980599, overlap 980599 TTGCACTAAATGAAA GTCTGCT GCTTA AGCAGAC TTTACATCAAGTCTT TERM 730 980583 - 980601 + G 80 -8.9 -3.66646 | opp_overlap 980583 980599, overlap 980599 TTGCACTAAATGAAA GTCTGCT GCTTA AGCAGAC TTTACATCAAGTCTT TERM 731 982710 - 982700 - g 79 -6.8 -4.63184 | opp_overlap 982700 AATGCATTTGAAAAA GCTG TAG CAGC TGATATTGATAAATT OTBS_0999 980453 - 984568 + | hypothetical protein TERM 732 984808 - 984855 + T 85 -8 -4.71401 | opp_overlap 984813 984836, overlap 984806 984801 984810 984812 984813 CGTAATTTTGCAAGC AATAATTGCATTATTGCTAATA ACAA TAGTAGCAATAATGCAACTGTC TTTTATCGTTTTATT TERM 733 984810 - 984853 + T 93 -10.6 -3.9392 | opp_overlap 984813 984836, overlap 984806 984801 984808 984812 984813 TAATTTTGCAAGCAA TAATTGCATTATTGCTAATA ACAA TAGTAGCAATAATGCAACTG TCTTTTATCGTTTTA TERM 734 984812 - 984851 + T 87 -11 -3.52813 | opp_overlap 984813 984836, overlap 984806 984801 984810 984808 984813 ATTTTGCAAGCAATA ATTGCATTATTGCTAATA ACAA TAGTAGCAATAATGCAAC TGTCTTTTATCGTTT TERM 735 984813 - 984850 + T 100 -14.5 -2.70061 | opp_overlap 984813 984836, overlap 984806 984801 984812 984810 984808 TTTTGCAAGCAATAA TTGCATTATTGCTAATA ACAA TAGTAGCAATAATGCAA CTGTCTTTTATCGTT TERM 736 984850 - 984813 - T 100 -14.5 -3.81146 | opp_overlap 984806 984801 984813 984812 984810 984808, overlap 984836 TTTTGCAAGCAATAA TTGCATTATTGCTAATA ACAA TAGTAGCAATAATGCAA CTGTCTTTTATCGTT TERM 737 986285 - 986303 + T 73 -8.2 -3.43619 | opp_overlap 986284 986285 AATATGCTTTTAAAG CTCAAGGA TTT TCTTTGAG TTAGTTAAGTTTAGT TERM 738 987204 - 987185 - T 72 -4.2 -5.12068 | opp_overlap 987185, overlap 987186 TACAGCTAATAAAAA TTGACCCC AGAG GGAGTCAG TATAATCGAGTGCAG TERM 739 987203 - 987186 - T 72 -7.7 -3.66156 | opp_overlap 987185, overlap 987185 ACAGCTAATAAAAAT TGACCCC AGAG GGAGTCA GTATAATCGAGTGCA TERM 740 987265 - 987250 - T 79 -7.6 -4.24404 | ACTCAAAGCTCAAAA GCTCTT GCTA AAGAGC TCAATATTCCAGTCA TERM 741 987330 - 987360 + T 89 -12.1 -2.52464 | gap 1, opp_overlap 987330 AAGATCAGATAAAAA GCCT-ATTCTCTCA GATC TGAGAGAATCAGGC TCCATTGAACAGGAC TERM 742 987360 - 987330 - T 100 -12.1 -5.03405 | gap 1, opp_overlap 987330 AAGATCAGATAAAAA GCCT-ATTCTCTCA GATC TGAGAGAATCAGGC TCCATTGAACAGGAC TERM 743 987468 - 987503 + T 87 -11.4 -3.02043 | opp_overlap 987476 987477, overlap 987477 ATATCTATATGTCCA TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGGACGAAATT TERM 744 987495 - 987476 - T 76 -5 -5.14965 | opp_overlap 987468 987477, overlap 987477 ATGTCCATGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGG TERM 745 987494 - 987477 - T 74 -8.5 -3.68256 | opp_overlap 987477 987468, overlap 987476 TGTCCATGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 746 987477 - 987494 + T 85 -8.5 -4.56883 | opp_overlap 987476 987477, overlap 987468 TGTCCATGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 747 987566 - 987584 + T 71 -4.6 -4.82901 | overlap 987568 CCTTTTTTACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGAGA TERM 748 989792 - 989806 + T 74 -7.2 -3.89346 | AAATCCATTCTTACA GCTAAA TTT TTTAGC TTTATCCAATAACAG OTBS_1004 990489 - 990100 - | hypothetical protein TERM 749 990141 - 990151 + g 74 -4 -5.30575 | TCTGTTTACTATCAT CATT AAT AATG TTTTTTAGCTTTTTC OTBS_1007 993181 - 992981 - | hypothetical protein OTBS_1008 993993 - 993559 - | hypothetical protein TERM 750 993838 - 993820 - G 71 -7.5 -3.43217 | opp_overlap 993820 993819 TAGTAACATTGATAA GCTCATA ATAAA TATGAGC CTTCTTTCCATTGTA hemH 995036 - 994002 - | ferrochelatase TERM 751 994811 - 994852 + g 100 -9.8 -5.24531 | opp_overlap 994818 994823, overlap 994818 CAGCTTGTAAAGTTG TTTGAAATAAAATTGGAG ATTTAC CTCCAATTTTATTATAAA TTTTTTGTGAAGACT TERM 752 994818 - 994845 + g 86 -10.1 -3.60344 | opp_overlap 994818 994823, overlap 994811 TAAAGTTGTTTGAAA TAAAATTGGAG ATTTAC CTCCAATTTTA TTATAAATTTTTTGT TERM 753 994845 - 994818 - G 87 -10.8 -3.54935 | opp_overlap 994818 994811, overlap 994823 TAAAGTTGTTTGAAA TAAAATTGGAGA TTTA CCTCCAATTTTA TTATAAATTTTTTGT TERM 754 994840 - 994823 - G 80 -6.3 -4.86731 | opp_overlap 994818 994811, overlap 994818 TTGTTTGAAATAAAA TTGGAGA TTTA CCTCCAA TTTTATTATAAATTT TERM 755 994969 - 994951 - G 71 -5.4 -4.67048 | overlap 994962 TTATCGTAAAACAAA TTAAACAA AAA CTGTTTAA CAGATTCAATTTTAT TERM 756 994972 - 994962 - G 84 -5.4 -5.41941 | overlap 994951 CAAATTAAACAAAAA CTGT TTA ACAG ATTCAATTTTATCTG hemE 996057 - 995029 - | uroporphyrinogen decarboxylase TERM 757 996265 - 996228 - H 81 -10.1 -3.38329 | overlap 996231 AAATATATATATTAA CAACATGTAGATAATAT AAAT AAACTATCCACATGTTG ATAAAAAATATAATA TERM 758 998697 - 998681 - g 90 -8.1 -4.84017 | AACGCTTTACAAAAA CCAAAAA GCT TTTTTGG AGCAGCTCGTAATAT rho 997544 - 999049 + | transcription termination factor Rho OTBS_1014 999791 - 999979 + | hypothetical protein TERM 759 1000639 - 1000655 + F 71 -2.3 -5.38951 | TTTTTTCTTTGGCAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT TERM 760 1001517 - 1001503 - f 75 -5.8 -4.74285 | ATCTATAACATAAAA TCAATT TAA AATTGA AGAATTGATTTTAAA TERM 761 1001783 - 1001793 + G 71 -5.4 -4.61147 | GCAGAATTATAGCAG GCTA TTC TAGC TTTTATATAGTATTG TERM 762 1002569 - 1002579 + G 85 -6.8 -5.04597 | opp_overlap 1002569 ATTACTTAGAACTTA GCGT TGC ACGC TTTTTCTCTATAAGT OTBS_1016 1001545 - 1002828 + | hypothetical protein TERM 763 1005285 - 1005273 - g 80 -7.7 -4.33956 | TGCAAAACATATAAA TGGAG TAA CTCCA TCAGCAATTATGGCA gidA 1003489 - 1005357 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA tmk 1006150 - 1005497 - | thymidylate kinase n2B 1007216 - 1006143 - | putative ATPase n2B engA 1009343 - 1007979 - | GTP-binding protein EngA TERM 764 1009299 - 1009311 + g 73 -7.7 -3.73953 | opp_overlap 1009291 AAATAAAGTAGATTT GCCAA CGT TTGGC TTTCCTACCAATGCT polA 1012136 - 1009404 - | DNA polymerase I panF 1013975 - 1012521 - | sodium/pantothenate symporter TERM 765 1014417 - 1014431 + G 95 -4.4 -6.26417 | opp_overlap 1014419 TATCAGGTTTTAGAG TATAAT TGC ATTATA TTTTTTTTTGTCATA OTBS_1024 1014315 - 1014473 + | hypothetical protein TERM 766 1015774 - 1015802 + G 80 -10.5 -2.77523 | opp_overlap 1015774 1015773 1015777 AGCAAGTCTGACAAT TTAGTAGAACGTA ATA TAAGTTCTACTAA TGATATTAATCAGCA TERM 767 1015802 - 1015774 - g 80 -10.5 -2.59921 | opp_overlap 1015774, overlap 1015773 1015777 AGCAAGTCTGACAAT TTAGTAGAACGTA ATA TAAGTTCTACTAA TGATATTAATCAGCA OTBS_1026 1015690 - 1016520 + | hypothetical protein TERM 768 1017815 - 1017831 + T 80 -2.3 -5.70829 | overlap 1017816 TCTTTGTTTCTTGGG TTACTAC TTA GTATTAA TTTTTTTCTACTCTT TERM 769 1019948 - 1019964 + T 73 -8.1 -3.46081 | opp_overlap 1019948 1019947 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCCTTAATTGAGTC secF 1021456 - 1020494 - | preprotein translocase subunit SecF mutS 1024173 - 1021504 - | DNA mismatch repair protein TERM 770 1021834 - 1021822 - G 72 -4.9 -4.84017 | opp_overlap 1021822 AATCTTGTATAAAAA TGATA ATT TATCA TTTGAGTCATGAATT TERM 771 1024207 - 1024228 + r 78 -3.1 -5.64873 | opp_overlap 1024211, overlap 1024211 1024215 GGAAATAATATTAAT TATATAACT AAAA AGTTATTTA TTTTTTATTATTAGC TERM 772 1024211 - 1024224 + r 73 -3.9 -5.22768 | opp_overlap 1024211, overlap 1024207 1024215 ATAATATTAATTATA TAACT AAAA AGTTA TTTATTTTTTATTAT tlc 1025758 - 1024226 - | ATP/ADP translocase TERM 773 1024665 - 1024648 - G 74 -5.7 -4.5774 | TACCAATAACTAAAA TTATTAC TGGT GTAATAA CTGCTCCCCAGTACC TERM 774 1025014 - 1025043 + g 71 -7.5 -3.3972 | gap 1, opp_overlap 1025014 1025012 GATGTAATAACAATA TGATAATTGTTGAT AGA AT-AACAATTATCA TTAATGATTTTATCG TERM 775 1025043 - 1025014 - G 73 -7.5 -3.57389 | gap 1, opp_overlap 1025014, overlap 1025012 GATGTAATAACAATA TGATAATTGTTGAT AGA AT-AACAATTATCA TTAATGATTTTATCG TERM 776 1026643 - 1026613 - g 71 -7.6 -3.56092 | opp_overlap 1026609 TTATCATGCTTGAAA CCGCTAAGCGATTA CTT TCATCTCTTAGCAG CATATTAAAAATTTT OTBS_1036 1026123 - 1026980 + | putative methyltransferase serS 1028271 - 1026982 - | seryl-tRNA synthetase TERM 777 1027512 - 1027530 + g 77 -4.6 -5.22006 | opp_overlap 1027511, overlap 1027513 AGCAAGGAGTAAACG CTACCAAT CTT ATTGGTAA TTTTTCTTCTAATAA TERM 778 1027513 - 1027529 + g 75 -8.1 -3.72119 | opp_overlap 1027511, overlap 1027512 GCAAGGAGTAAACGC TACCAAT CTT ATTGGTA ATTTTTCTTCTAATA tatC 1029016 - 1028249 - | sec-independent protein translocase protein TERM 779 1029092 - 1029055 - H 89 -11.7 -2.78925 | opp_overlap 1029056 1029063 1029066, overlap 1029051 1029063 1029066 ATTATAACAAAGTGA TTTATAAATAATGTTTC ACGT GAAACATTATTTATAAT ATGATATTCATTATA TERM 780 1029056 - 1029091 + H 100 -15.2 -2.95208 | opp_overlap 1029055 1029051 1029063 1029066, overlap 1029063 1029066 TTATAACAAAGTGAT TTATAAATAATGTTTC ACGT GAAACATTATTTATAA TATGATATTCATTAT TERM 781 1029084 - 1029063 - H 82 -8.9 -3.93984 | opp_overlap 1029063 1029056 1029066, overlap 1029055 1029051 1029066 AAAGTGATTTATAAA TAATGTTTC ACGT GAAACATTA TTTATAATATGATAT TERM 782 1029063 - 1029084 + H 83 -8.9 -4.0348 | opp_overlap 1029055 1029051 1029063 1029066, overlap 1029056 1029066 AAAGTGATTTATAAA TAATGTTTC ACGT GAAACATTA TTTATAATATGATAT TERM 783 1029081 - 1029066 - H 70 -6.2 -4.09117 | opp_overlap 1029066 1029063 1029056, overlap 1029063 1029055 1029051 GTGATTTATAAATAA TGTTTC ACGT GAAACA TTATTTATAATATGA TERM 784 1029066 - 1029081 + H 70 -6.2 -4.1337 | opp_overlap 1029063 1029055 1029051 1029066, overlap 1029063 1029056 GTGATTTATAAATAA TGTTTC ACGT GAAACA TTATTTATAATATGA gidB 1029162 - 1029758 + | glucose-inhibited division protein B parA 1029765 - 1030562 + | chromosome partitioning protein TERM 785 1031267 - 1031246 - g 78 -2.3 -5.82281 | AAATACATAAAAAAA CTAACTAAT CCAA ACAAGTTAG ACAAATATAATCACG TERM 786 1031377 - 1031363 - g 86 -7.2 -4.83032 | AGATTAAATACAAAA GTTTTC ATT GAAAAC TCAAATCATGGAGGG parB 1030574 - 1031455 + | chromosome partitioning protein TERM 787 1032898 - 1032882 - T 71 -2.3 -5.38951 | AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTGCCAAAGAAAAAA OTBS_1045 1033906 - 1033625 - | hypothetical protein xseB 1033960 - 1034199 + | exodeoxyribonuclease VII small subunit TERM 788 1036191 - 1036169 - f 78 -10 -3.1577 | opp_overlap 1036174, overlap 1036174 1036184 AGCTAATACTTAACA TATAAGCCTC TGA AAGGCTTATA ACGCCAAATTAGGAT TERM 789 1037383 - 1037363 - g 95 -9.1 -5.08011 | AAAACTTCTAAAAAA TTTTCAGCG TTT CACTGAAAA AGAAAAAAAAGAAGA TERM 790 1037412 - 1037394 - g 87 -2.4 -6.4275 | overlap 1037403 GAAAAAGAAAAAAAA GAAGAAAA AGT TGTCCTTC TACAACAAAAAAATT TERM 791 1037418 - 1037403 - g 79 -3.3 -5.54403 | overlap 1037394 AAAAAAGAAGAAAAA GTTGT CCTTCT ACAAC AAAAAAATTTTCACA TERM 792 1037467 - 1037448 - g 89 -10.8 -3.65581 | opp_overlap 1037456 ATCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT TERM 793 1037860 - 1037846 - g 74 -8.6 -3.3375 | opp_overlap 1037843 1037839, overlap 1037836 1037844 ACTAACACCAGAAGA TGCAGT TAT ACTGCA ACGTATGTCTAGTAG TERM 794 1038439 - 1038423 - g 72 -7.3 -3.80858 | opp_overlap 1038408 1038419 1038423 TCAGAACTTAGTAAA GAGCTAG GTT CTAACTC TATATTGTTCAAAGT tchD 1036968 - 1038692 + | hypothetical protein ank1C7 1038911 - 1039786 + | ankyrin repeat-containing protein rhp6 1039880 - 1040383 + | putative ompA-like autotransporter TERM 795 1040749 - 1040731 - T 74 -3.2 -5.35459 | ATAGATTACAAAAAA CTAGAATA AAT TATTATAG AAAACCTAGTAGATA TERM 796 1041780 - 1041796 + T 82 -10.9 -2.75844 | overlap 1041779 TCCATTATCCTAATC TGGCGTT ATA AACGCCA ATTTAGGATAAGGAA TERM 797 1042829 - 1042813 - T 71 -2.3 -5.38951 | overlap 1042820 AAGGCATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTBS_1059 1045349 - 1043523 - | hypothetical protein TERM 798 1046252 - 1046236 - R 71 -2.3 -5.38951 | overlap 1046243 AAGGCATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA TERM 799 1048437 - 1048423 - R 78 -10 -3.14013 | opp_overlap 1048414, overlap 1048412 1048421 CAATCACAGCTAACA GCTCTG GTA CAGAGC GTAGATGATCTGTTT traV 1049748 - 1049455 - | conjugative transfer protein traB 1050232 - 1049762 - | conjugative pilus assembly protein TERM 800 1052362 - 1052346 - g 82 -9.5 -3.57648 | opp_overlap 1052345 1052344, overlap 1052344 TAATGCAAAAATAGA CCTCAAA GAA TTTGAGG GGTTAATTATCAATC tnB 1052149 - 1053015 + | transposase and inactivated derivative dam11 1053924 - 1053121 - | site-specific DNA adenine methylase TERM 801 1054115 - 1054096 - H 71 -2.2 -5.38348 | opp_overlap 1054088 1054109, overlap 1054088 1054086 1054109 AAAAAGATGAAAAAA TTTTTCAT AATT ATGACAAA AAGTCATGTACTGAT rhp5 1054400 - 1055116 + | hypothetical protein TERM 802 1055201 - 1055221 + F 88 -5.5 -5.55855 | ACTCAGAATCAATTG TATATCTCA TTT TGAGAGATA TTTTGTTTTTTTAGA hkp23 1055468 - 1056211 + | putative signal transduction histidine kinase hkp24 1056219 - 1057076 + | putative signal transduction histidine kinase TERM 803 1057537 - 1057520 - g 79 -2.7 -5.89921 | AGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTCAAACATTTTATA TERM 804 1057653 - 1057640 - g 71 -3.1 -5.16237 | AACCTTATGAAAAAA GACAA AAAA TCGTC ATTGAAACTCAGCAA TERM 805 1057689 - 1057661 - g 73 -7.5 -3.66095 | opp_overlap 1057661, overlap 1057662 AAATCGTCATTGAAA CTCAGCAAGAATT TAT ACCTCTTGCTGAA TACCTTAATCTACCA TERM 806 1057688 - 1057662 - g 71 -8.8 -2.79175 | opp_overlap 1057661, overlap 1057661 AATCGTCATTGAAAC TCAGCAAGAATT TAT ACCTCTTGCTGA ATACCTTAATCTACC spoT23 1057177 - 1057752 + | spoT-like ppGpp hydrolase rhp4 1058328 - 1057789 - | hypothetical protein TERM 807 1058049 - 1058066 + g 86 -5.7 -5.46629 | TAAGCTTTTCTACTG CATATAA TGTG TTATATG TTTTTTTAGCATATT traD_Ti 1058871 - 1058416 - | conjugative transfer protein TERM 808 1058552 - 1058574 + g 77 -7.8 -4.13767 | ATGTGGAGCTTAGTG TTTTCGTCTG GTT CAGAGGAAAA TTTTAAAATCACGGC TERM 809 1058799 - 1058827 + g 91 -5.3 -5.7946 | GTTCTTTAATTTTAA GGTTAACCTCATC CAT GATTAGCTTAGCC TTTTTTTGTTGGAGA OTBS_1077 1059073 - 1058873 - | hypothetical protein TERM 810 1061657 - 1061637 - H 100 -11.2 -4.2803 | TATTCGAAGGTAAAA TGAGCTGC ATAGA GCAGCTCA AGGATAATAAAGATA TERM 811 1063855 - 1063837 - g 72 -2.5 -5.43866 | gap 1 GAATCGTTAAAAAAA TATAG-CG ATAT CGTCTATA AAGTTGCAACCAAAA TERM 812 1063883 - 1063872 - g 70 -4.4 -4.86621 | opp_overlap 1063872 1063867 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 813 1063872 - 1063883 + G 73 -4.4 -5.08878 | opp_overlap 1063872, overlap 1063867 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 814 1064017 - 1063991 - g 79 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTATAACGGCA tnE 1063669 - 1064580 + | transposase and inactivated derivative TERM 815 1065785 - 1065808 + T 73 -8.2 -3.38674 | overlap 1065784 CTTTACTAATGGCAA GCCTCCAAAA CAGA TTTTCGAGGC CTTTTTAGCGCTTTT tpr1B11 1066999 - 1066337 - | TPR repeat-containing protein TERM 816 1067840 - 1067818 - R 75 -4.8 -5.06451 | opp_overlap 1067821 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAATAGAATCC traN 1072647 - 1070986 - | conjugative transfer protein TERM 817 1072021 - 1072004 - G 72 -8.5 -3.14795 | overlap 1072002 AAATTTCTACCAATA TGGTGTA TAGA TACACCA AGCCTATTAGCAATA trbC 1072990 - 1072670 - | conjugative transfer protein traV 1074237 - 1073947 - | conjugative transfer protein traB 1074701 - 1074237 - | conjugative pilus assembly protein tchB 1075214 - 1074813 - | hypothetical protein traE 1075762 - 1075211 - | conjugative transfer protein tchA 1076097 - 1075762 - | hypothetical protein OTBS_1096 1078504 - 1078917 + | hypothetical protein TERM 818 1080810 - 1080794 - T 73 -8.1 -3.46081 | opp_overlap 1080793 1080794 GACTCAATTAAGGAA CGTTTAT TTA ATAAACG CTTATCATCTATGTC fdxB 1083200 - 1082856 - | ferredoxin-like iron-sulfur cluster-binding protein TERM 819 1083137 - 1083125 - G 74 -9.1 -3.01745 | overlap 1083120 CTTCTAATAATGACA GCCCA ATT TGGGC ATCAACCATTTTTTC hscA 1085067 - 1083217 - | chaperone protein HscA hscB 1085557 - 1085054 - | co-chaperone HscB TERM 820 1085287 - 1085275 - G 76 -3.5 -5.37593 | overlap 1085267 1085276 TTTGAAATGAAAAAA TTTTT TCC AAAAA ATCAATAGTTATTAC iscA 1085943 - 1085569 - | iron-sulfur cluster assembly accessory protein iscU 1086381 - 1085956 - | FeS cluster assembly scaffold protein TERM 821 1086375 - 1086385 + g 75 -2.6 -5.6473 | CTGTTTTTGCATCAT TATT CAT AATA TTTTTTTCCTCTTAT iscR 1089451 - 1089005 - | iron-sulfur cluster assembly transcription regulation factor TERM 822 1089082 - 1089094 + g 70 -6.3 -4.32571 | CATCCAAAGAGATTT CACTA AAG TAGTG TTTAATTTTATATTC TERM 823 1089541 - 1089518 - H 90 -7.6 -5.2422 | opp_overlap 1089518, overlap 1089520 AACTAGACTAAAAAA TATTTGCTAT AACT ATAGCAAACA TCTAATTATTACTGT TERM 824 1089539 - 1089520 - H 79 -8 -4.23988 | opp_overlap 1089518, overlap 1089518 CTAGACTAAAAAATA TTTGCTAT AACT ATAGCAAA CATCTAATTATTACT OTBS_1108 1089656 - 1090357 + | hypothetical protein TERM 825 1090433 - 1090449 + F 74 -8.7 -3.34013 | overlap 1090409 CAATTTCTTGTAGCG CCGGTTT TCA AGACCGG TTCCTTAAACCACTC TERM 826 1090950 - 1090940 - g 71 -5.4 -4.71222 | ATAGCAAAATTAAAA TTGC AAC GCAA TACGTAACCAAGCAG ftsA 1090651 - 1091898 + | cell division protein OTBS_1110 1091877 - 1093178 + | hypothetical protein TERM 827 1093648 - 1093659 + G 77 -3 -5.54894 | opp_overlap 1093648 TACTGGAAAAATTAT CTTA ACAC TAAG TTTTTTTCATCAGTT OTBS_1111 1093163 - 1094914 + | putative glycosyl transferase, group 2 OTBS_1112 1094956 - 1095120 + | hypothetical protein TERM 828 1095568 - 1095552 - T 73 -8.1 -3.46081 | opp_overlap 1095552 1095551 1095548 GACTCAATTAATGAA CGTTTAT TTA ATAAACG CTTATCTTCAGTATC TERM 829 1096353 - 1096303 - T 100 -13.3 -4.84262 | opp_overlap 1096307 1096310 1096313, overlap 1096307 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATGGATTGAAACA TERM 830 1096307 - 1096349 + T 79 -8.3 -3.99405 | opp_overlap 1096303 1096307, overlap 1096310 1096313 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATGGATTGA TERM 831 1096349 - 1096307 - T 90 -8.3 -4.91657 | opp_overlap 1096307 1096310 1096313, overlap 1096303 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATGGATTGA TERM 832 1097028 - 1097012 - T 70 -5.9 -4.3208 | overlap 1097013 TTTGAGAACTCAAAA CTGTTTC ACA GAAACAA ATCAATGAAGAAGAG TERM 833 1098060 - 1098045 - T 77 -7.6 -4.1721 | opp_overlap 1098035 ACTCAGAGCTTAAAA GCTCTT GCTA AAGAGC TCAATATTTCAATAA TERM 834 1098155 - 1098125 - T 90 -8.5 -4.98522 | gap 1, opp_overlap 1098125 AAGGTCAGATAAAAA GCCT-ATTCTCTCA GATC TAAGAGAATCAGGC TCAATTGAACAGGAC TERM 835 1099691 - 1099701 + T 70 -4 -4.95806 | ATATTATTCTCTTTA TTTG AAT CAAA TTTTTATACTAATTT rpoD 1102689 - 1100845 - | RNA polymerase sigma factor TERM 836 1102463 - 1102485 + g 100 -11.4 -4.02005 | TCAAATTCTCCTTCA GTAGCATTAG AAG CTAGTGCTAC TTCTTCTTCGATTTT dnaG 1104448 - 1102673 - | DNA primase TERM 837 1103274 - 1103289 + g 84 -3.4 -5.72616 | CAATCTTTGATTTCT TTAATA TAAT TATTAA TTTTTTTCTCTAACT TERM 838 1104161 - 1104176 + g 76 -6.2 -4.65916 | opp_overlap 1104161 1104160 CTCTTTTGAAAATAT TGGTAT ATCA ATACCA TTTTCTTGAGCTAGC dprA 1106528 - 1105368 - | DNA processing protein tdpX1 1107171 - 1106569 - | thioredoxin peroxidase 1 TERM 839 1109886 - 1109904 + r 83 -10.3 -3.38812 | overlap 1109885 TTTACATGCATGCAT GTGCGAC ATGAA GTCGCAC TATTCTTACCACAAC TERM 840 1110348 - 1110369 + r 86 -7.5 -5.20333 | ACAACTATCTTTATT TTTAAAAAC TCTG GTTTTTAAA TTTTTGTTCTACATA TERM 841 1110608 - 1110619 + r 71 -3 -5.33785 | TATATTATGCTTCTT TTTG ATAG CAAA TTTTTTATACTAATT TERM 842 1110866 - 1110853 - R 73 -3.9 -5.20606 | overlap 1110843 1110841 AAATATTAATAAAAA TTAAC ATAA GTTAA TAGTAAGTTCTATAA TERM 843 1112270 - 1112234 - R 100 -12.5 -3.74251 | opp_overlap 1112224, overlap 1112236 CACATTTGTATTAAA TACAGGCGTAATAAAAA AAA TTGTTATTACGCCTGGA ATAGATACCATGTTA TERM 844 1112268 - 1112236 - R 100 -15.1 -3.45324 | opp_overlap 1112224, overlap 1112234 CATTTGTATTAAATA CAGGCGTAATAAAAA AAA TTGTTATTACGCCTG GAATAGATACCATGT TERM 845 1112342 - 1112306 - R 77 -5.6 -4.98103 | opp_overlap 1112309, overlap 1112301 CAAGAAAAGATAAAA TAATTTTATAAAAA AGATGTGAG TTTTTATAAAATTA TTAAGCTAGCAGGTA OTBS_1130 1112623 - 1112456 - | hypothetical protein OTBS_1131 1112941 - 1112705 - | hypothetical protein ank1F1 1115280 - 1116767 + | ankyrin repeat-containing protein TERM 846 1117536 - 1117518 - f 76 -7.6 -3.9344 | opp_overlap 1117518 1117521, overlap 1117521 AACTTTAATATCAAA GAATAATA AAT TATTATTC TAAATTTAGTGAGTC pepA 1117555 - 1119207 + | leucyl aminopeptidase TERM 847 1119401 - 1119373 - g 76 -6.2 -4.61868 | gap 1, overlap 1119375 TACTTATATACAAAA TCGCAATGCTTAT AATG ATAAGCA-TGCAA ATAGTAAAGTTACTG OTBS_1136 1119191 - 1120042 + | hypothetical protein TERM 848 1121176 - 1121155 - g 72 -2.4 -5.41746 | AAGCTGCTAAAAAAA TTACTAAA ATGAAA CTTAGTAA AAAAGTAACAAAAAT rpsB 1120317 - 1121243 + | 30S ribosomal protein S2 tsf 1121240 - 1122169 + | elongation factor EF-Ts TERM 849 1122171 - 1122192 + T 78 -10.3 -2.59742 | opp_overlap 1122169 1122170 1122167, overlap 1122170 1122173 AAGTAGTAGAATAGT GACTAAGAA TTTT TTCTTAGTC CTTGTAAGAATTAAA pheT 1124687 - 1122249 - | phenylalanyl-tRNA synthetase subunit beta pheS 1125718 - 1124684 - | phenylalanyl-tRNA synthetase subunit alpha TERM 850 1124907 - 1124878 - G 74 -6.6 -4.23723 | opp_overlap 1124880, overlap 1124880 TAACATTACGTAAAA CATTAGGATGTA CTATAC CACATCCTAATA CTTCCAACCATTTAT TERM 851 1125462 - 1125485 + g 85 -8.2 -4.43272 | TCAACTTTCTCACTA GCAAGCAATG TCAC CATTTCTTGC TTTTGAATTTTAGCT TERM 852 1125766 - 1125754 - H 75 -4.9 -5.1167 | opp_overlap 1125749 1125754 AATTTAATACAAAAA TTAGT ATA ACTAA TTTTGATTGTCAACG TERM 853 1126919 - 1126936 + H 81 -2.7 -5.80364 | AACGCAATATTTTAA TCATTTC TCTA GAACTGA TTTTTTTATTCCAAT tchA 1129556 - 1129891 + | hypothetical protein tchB 1130439 - 1130840 + | hypothetical protein traB 1130952 - 1131416 + | conjugative pilus assembly protein traV 1131416 - 1131706 + | conjugative transfer protein trbC 1132663 - 1132983 + | conjugative transfer protein TERM 854 1134154 - 1134134 - f 71 -7.7 -3.41602 | CGTATTCTAGCACAA GATAATGCT TGT AACATTATC AATACAGTATTTGTT TERM 855 1139675 - 1139697 + F 75 -4.8 -5.06451 | opp_overlap 1139678 GGATTCTATTAATAA TATGGGTCAG CAG CTGGCCAGTA TTTTTTACAATAATC tpr1B12 1140518 - 1141180 + | TPR repeat-containing protein TERM 856 1141738 - 1141713 - f 71 -4.7 -4.77925 | overlap 1141714 AAAAAACGCTAAAAA GGCCTCAAAAA TCTG TTTTAGAGGCT TGCCATTAGTAAAGA TERM 857 1141737 - 1141714 - f 73 -8.2 -3.44315 | overlap 1141713 AAAAACGCTAAAAAG GCCTCAAAAA TCTG TTTTAGAGGC TTGCCATTAGTAAAG TERM 858 1142695 - 1142679 - g 73 -8.1 -3.54574 | overlap 1142688 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA tnD 1142241 - 1143203 + | transposase and inactivated derivative TERM 859 1143243 - 1143201 - T 87 -8.3 -4.77157 | opp_overlap 1143201 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGACT TERM 860 1143201 - 1143243 + T 90 -8.3 -4.88795 | opp_overlap 1143201 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGACT TERM 861 1143545 - 1143562 + T 85 -2.7 -5.89921 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTATTATCCT hkp25 1144863 - 1144006 - | putative signal transduction histidine kinase TERM 862 1144163 - 1144173 + g 71 -5.4 -4.68724 | opp_overlap 1144161 1144163 ACCAAGTCAAAATCA GCTA ATT TAGC TTTTATATTCCCTAA hkp26 1145614 - 1144868 - | putative signal transduction histidine kinase dam12 1145963 - 1146175 + | site-specific DNA adenine methylase TERM 863 1146252 - 1146225 - T 71 -2.1 -5.42259 | gap 1, opp_overlap 1146232, overlap 1146226 1146228 TGAGGTTTAAAAAAA GTA-GGAAGTCA AAACA TGACTTCCATAT AGCGCTATAATTGAT TERM 864 1146248 - 1146228 - T 81 -9.8 -3.49966 | opp_overlap 1146232, overlap 1146226 1146225 GGTTTAAAAAAAGTA GGAAGTCA AAACA TGACTTCC ATATAGCGCTATAAT rhp4 1146797 - 1146267 - | hypothetical protein TERM 865 1147099 - 1147112 + H 76 -3.9 -5.44119 | TTTTTGTAATATTTC TGAAA ATTT TTTCA TTTTTTTAAAATAGA OTBS_1169 1147127 - 1147354 + | hypothetical protein rhp6 1148614 - 1148093 - | putative ompA-like autotransporter ank1C8 1149090 - 1148716 - | ankyrin repeat-containing protein TERM 866 1149674 - 1149656 - R 78 -6.1 -4.68705 | ATAATTTCAAGAAAA TCTATTG GCATT CAATAGA TTGGAAAGAAATTAT TERM 867 1150315 - 1150327 + r 72 -7.7 -3.63059 | AACAACAACTGGCAC TCCAC AAG GTGGA TTAATTTCTCCATTA TERM 868 1151361 - 1151350 - R 77 -7.2 -4.25104 | opp_overlap 1151350 TCTTTGGGAGGAAAA GCGC TCCT GCGC TTACCTACCCGCTTA ank1C9 1151714 - 1151442 - | ankyrin repeat-containing protein spoT26 1152329 - 1151754 - | spoT-like ppGpp hydrolase TERM 869 1151817 - 1151845 + g 73 -7.5 -3.69934 | opp_overlap 1151817, overlap 1151818 TGGTAGTTTAAGGTA TTCAGCAAGAGCT ATA AATTCTTGCTGAG TTTCAAATATTATTT TERM 870 1151818 - 1151844 + g 71 -8.8 -2.80876 | opp_overlap 1151817, overlap 1151817 GGTAGTTTAAGGTAT TCAGCAAGAGCT ATA AATTCTTGCTGA GTTTCAAATATTATT TERM 871 1154303 - 1154319 + r 70 -5.9 -4.30014 | overlap 1154304 CTCTTCTTCATTGAT TTGTTTC TGT GAAACAG TTTTGAGTTGCTCAA TERM 872 1154946 - 1154972 + r 74 -5.4 -4.96523 | opp_overlap 1154946 1154958, overlap 1154959 GAAGTCCGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 873 1155026 - 1155040 + r 89 -3.6 -6.06529 | CTCACCTTCAGTAGA TCTAGA TAT TTTAGA TTTTTTTTATATATC TERM 874 1155068 - 1155103 + r 87 -11.4 -3.02043 | opp_overlap 1155076 1155077, overlap 1155077 ATCTATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGGACGAAATT TERM 875 1155095 - 1155076 - R 74 -5 -5.00884 | opp_overlap 1155068 1155077, overlap 1155077 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGG TERM 876 1155094 - 1155077 - R 74 -8.5 -3.60048 | opp_overlap 1155068 1155077, overlap 1155076 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 877 1155077 - 1155094 + r 85 -8.5 -4.56883 | opp_overlap 1155077 1155076, overlap 1155068 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 878 1155166 - 1155184 + r 71 -4.6 -4.82901 | overlap 1155168 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGAA OTBS_1179 1157488 - 1156397 - | hypothetical protein hkp27 1158845 - 1159591 + | putative signal transduction histidine kinase TERM 879 1160296 - 1160286 - g 71 -5.4 -4.68724 | opp_overlap 1160284 1160286 TTAGGGAATATAAAA GCTA AAT TAGC TGATTTTGACTTGGT hkp28 1159596 - 1160453 + | putative signal transduction histidine kinase TERM 880 1160914 - 1160897 - T 85 -2.7 -5.89921 | AGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTCAAACATTTTATA TERM 881 1161216 - 1161258 + T 87 -8.3 -4.77157 | opp_overlap 1161216 AGTCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA TERM 882 1161258 - 1161216 - T 90 -8.3 -4.88795 | opp_overlap 1161216 AGTCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA tnD 1162218 - 1161256 - | transposase and inactivated derivative TERM 883 1161764 - 1161780 + g 73 -8.1 -3.54574 | overlap 1161761 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG TERM 884 1162721 - 1162746 + r 71 -4.7 -4.77925 | overlap 1162722 TCTTTACTAATGGCA AGCCTCTAAAA CAGA TTTTTGAGGCC TTTTTAGCGTTTTTT TERM 885 1162722 - 1162745 + r 73 -8.2 -3.44315 | overlap 1162721 CTTTACTAATGGCAA GCCTCTAAAA CAGA TTTTTGAGGC CTTTTTAGCGTTTTT tpr1B13 1163941 - 1163279 - | TPR repeat-containing protein TERM 886 1164784 - 1164762 - R 75 -4.8 -5.06451 | opp_overlap 1164765 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAATAGAATCC OTBS_1191 1168502 - 1168113 - | hypothetical protein tpr1B14 1168920 - 1168612 - | TPR repeat-containing protein OTBS_1192 1168559 - 1168765 + | hypothetical protein ank1u7 1169661 - 1170698 + | ankyrin repeat-containing protein TERM 887 1171909 - 1171965 + T 82 -10.8 -2.53213 | opp_overlap 1171916 1171919 1171922, overlap 1171916 TCTTATCCTAATCTG GCGTAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTTTGC TGGATTGAAACATTA TERM 888 1171958 - 1171916 - T 74 -8.3 -3.54459 | opp_overlap 1171909 1171916, overlap 1171919 1171922 CTAATCTGGCGTAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA TERM 889 1171916 - 1171958 + T 87 -8.3 -4.77157 | opp_overlap 1171916 1171919 1171922, overlap 1171909 CTAATCTGGCGTAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA tnD 1172918 - 1171956 - | transposase and inactivated derivative TERM 890 1172464 - 1172480 + g 73 -8.1 -3.54574 | overlap 1172461 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG trbC 1175766 - 1175446 - | conjugative transfer protein traV 1177012 - 1176776 - | conjugative transfer protein traB 1177476 - 1177012 - | conjugative pilus assembly protein tchB 1177989 - 1177588 - | hypothetical protein traE 1178537 - 1177986 - | conjugative transfer protein tchA 1178872 - 1178537 - | hypothetical protein int 1180242 - 1178998 - | phage-related integrase TERM 891 1180599 - 1180614 + r 71 -4.8 -4.80959 | opp_overlap 1180599 CTATAAAGTGTAGAA GTTAAT AAAA ATTAAC TTTTCTTCTCCCTTA sco2 1181274 - 1180687 - | putative electron transport protein TERM 892 1181197 - 1181223 + g 86 -3.1 -6.15259 | opp_overlap 1181198, overlap 1181198 GCTTGTGACCATAGA ATAGCTAATAT TATCT GTATTAGCTAC TTTTTTTTTAGATTG TERM 893 1181198 - 1181222 + g 74 -6.6 -4.26715 | opp_overlap 1181198, overlap 1181197 CTTGTGACCATAGAA TAGCTAATAT TATCT GTATTAGCTA CTTTTTTTTTAGATT traV 1181602 - 1181474 - | conjugative transfer protein TERM 894 1181892 - 1181874 - H 91 -9 -4.76213 | opp_overlap 1181878, overlap 1181860 ATAAATTTAAGAAAA TCTATTGA CAT TCAATAGA TTGGAAAGAAATTAT TERM 895 1185538 - 1185528 - H 72 -4 -5.14563 | opp_overlap 1185528 TGCTGCATTAAAAAA TTTG TTC CAAA TAAATGTAGTTGAGA dnaQ 1187569 - 1188237 + | DNA polymerase III epsilon chain carD 1188457 - 1188966 + | putative transcriptional factor regulator TERM 896 1189597 - 1189571 - g 73 -8.2 -3.52906 | overlap 1189569 TGATCCTCACAAATA TTCTTTACCATT GTC AATGACAAAGAA ATCTGGCTGTGATCT gcp 1188990 - 1190024 + | O-sialoglycoprotein endopeptidase TERM 897 1190326 - 1190314 - g 74 -6.3 -4.46675 | ATTTAATAGAACAAA TTAGC TCT GCTAA AGTAGTTGCAATTAA ppnK 1190037 - 1190828 + | putative inorganic polyphosphate/ATP-NAD kinase OTBS_1221 1192153 - 1190930 - | hypothetical protein TERM 898 1191016 - 1191002 - G 70 -7.1 -3.57561 | opp_overlap 1191001 TGGTAACTCTTGAAA TGGGC TTGCT GCCCA AATTGCTCGTTTAAC TERM 899 1191574 - 1191600 + g 82 -11 -2.65279 | opp_overlap 1191579, overlap 1191568 1191579 TAGCTTTTTGTTCGA TAGAACCACTTT GTA AAGGTGGTTCTG TAACTTTAGGAATTA TERM 900 1191579 - 1191595 + g 70 -7.3 -3.57797 | opp_overlap 1191579, overlap 1191574 1191568 TTTTGTTCGATAGAA CCACTTT GTA AAGGTGG TTCTGTAACTTTAGG tolR 1192598 - 1192140 - | transport protein TERM 901 1192536 - 1192550 + g 82 -6.4 -5.02074 | opp_overlap 1192536 1192537, overlap 1192537 TATATTGCTAATTAA TGCTCT CTT AGAGCG TTTTTTAGCGAATAC TERM 902 1192537 - 1192549 + g 73 -7.7 -3.60762 | opp_overlap 1192537 1192536, overlap 1192536 ATATTGCTAATTAAT GCTCT CTT AGAGC GTTTTTTAGCGAATA tolQ 1193293 - 1192604 - | transport protein TERM 903 1192724 - 1192709 - G 76 -6.2 -4.5477 | overlap 1192712 TAATATATTATAAAA TATTCC AGCT GGAATA GCTGCAAATAATCCT TERM 904 1193393 - 1193407 + H 71 -7.2 -3.8579 | opp_overlap 1193402, overlap 1193402 AAGTGTTGTGAGCAC GCAATA AGA TATTGC TTTGCATTATTGAAT TERM 905 1193626 - 1193605 - g 74 -6.7 -4.28049 | ATAAAGAAATAATAA TTAACACTA TGCC TAGCGTTAA AATTGTTTCACCTGA hemB 1193457 - 1194470 + | delta-aminolevulinic acid dehydratase TERM 906 1196584 - 1196640 + G 90 -9.7 -4.29738 | opp_overlap 1196595, overlap 1196595 ACAAAAATTAATGAT TGCAGGTAGAATTTTATCAGAACCATT TCT AAGGGTTCTGATAAAATTTTGGCAACA TTTTGATACCTGTAA TERM 907 1196629 - 1196595 - g 100 -14.6 -3.36327 | opp_overlap 1196595 1196584 TGATTGCAGGTAGAA TTTTATCAGAACCATT TCT AAGGGTTCTGATAAAA TTTTGGCAACATTTT TERM 908 1196595 - 1196629 + G 100 -14.6 -4.10855 | opp_overlap 1196595, overlap 1196584 TGATTGCAGGTAGAA TTTTATCAGAACCATT TCT AAGGGTTCTGATAAAA TTTTGGCAACATTTT TERM 909 1196791 - 1196773 - g 74 -3.8 -5.24129 | CTCTTCTATAAAAAA CAAACCTG CAT CAGATGTG ATAGTTACAAATGAT OTBS_1226 1195181 - 1197637 + | hypothetical protein OTBS_1228 1199209 - 1201014 + | GTP-binding protein LepA OTBS_1236 1208741 - 1207881 - | hypothetical protein TERM 910 1208692 - 1208667 - G 78 -9.3 -3.39005 | opp_overlap 1208674, overlap 1208670 1208674 GATATAACTCGATAA TAATAAACTTA TAAG TAAGTTTATTA ACACTAACTCTAGAT TERM 911 1208734 - 1208746 + g 72 -3.5 -5.16071 | opp_overlap 1208734 GCCACAAATACAGAA TAATT CAT AATTA TTTTTATTAATGCTT ssb 1209287 - 1208820 - | single-stranded DNA-binding protein TERM 912 1209344 - 1209356 + r 81 -3.5 -5.66338 | TAAGTTAAAATTTTA TATTA TGC TAATA TTTTTTGTTATGTTT OTBS_1239 1209980 - 1209651 - | hypothetical protein ank1C10 1212280 - 1211723 - | ankyrin repeat-containing protein TERM 913 1212752 - 1212768 + H 71 -7.3 -3.80858 | opp_overlap 1212752 1212748 1212755 ACTTTGAACAATATA GAGTTAG AAC CTAGCTC TTTACTAAGTTCTGA TERM 914 1213331 - 1213345 + H 74 -8.6 -3.3375 | opp_overlap 1213328 1213324, overlap 1213329 1213344 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGTGTTAGT TERM 915 1213724 - 1213743 + H 90 -10.8 -3.65581 | opp_overlap 1213710 ATGTAGCTGCAATTT TTTGCAGG TTCA CCTGCAAA TTCTTGCAAATTGAT TERM 916 1213779 - 1213797 + H 87 -2.4 -6.20267 | AATTTTTTTGTTGTA GAAGGACA ATT TTTTCTTC TTTTTTTCTTTTTCA TERM 917 1213807 - 1213827 + H 100 -9.1 -5.08011 | TTCTTCTTTTTTTCT TTTTCAGTG GAA CGCTGAAAA TTTTTTAGAAGTTTT TERM 918 1214166 - 1214147 - H 86 -6.4 -5.4588 | opp_overlap 1214147 1214150 1214158, overlap 1214150 TAAAACGATAAAAAA CAGTTGCA TTAT TGCTACTG TTATTATTAGCAATT greA 1215705 - 1216184 + | transcription elongation factor rpoH 1216231 - 1217130 + | RNA polymerase factor sigma-32 TERM 919 1217715 - 1217673 - T 78 -9.5 -3.35867 | gap 1, opp_overlap 1217674, overlap 1217676 TCAACTGCTAACCAA CGATTTACGTATGTTTACAA ATCT TCGTAAACATACGCAAA-CA TACTTATTGAACATA TERM 920 1217713 - 1217676 - T 100 -14.5 -2.84276 | opp_overlap 1217674, overlap 1217673 ACTGCTAACCAACGA TTTACGTATGTTTACAA ATCT TCGTAAACATACGCAAA CATACTTATTGAACA OTBS_1250 1218648 - 1218094 - | hypothetical protein OTBS_1251 1218910 - 1219107 + | hypothetical protein TERM 921 1219132 - 1219158 + T 76 -6.6 -4.38171 | overlap 1219154 AAAATAGCTTGAGCT TTTGAGAGGCGG ATA CTGCTTATCAAA TTTTGATCTCATGTG TERM 922 1219635 - 1219673 + T 78 -9.9 -3.06696 | opp_overlap 1219643, overlap 1219637 1219643 TCTAGGGCATAGTGA TAGCCAAACTATTATAA CTGTT TTATAGTAGTTTAGCTA TATATTAAAAGAAGA TERM 923 1219637 - 1219671 + T 70 -8.1 -3.09273 | opp_overlap 1219643, overlap 1219635 1219643 TAGGGCATAGTGATA GCCAAACTATTATAA CTGTT TTATAGTAGTTTAGC TATATATTAAAAGAA traC 1222801 - 1222433 - | conjugative transfer protein traV 1223111 - 1222782 - | conjugative transfer protein traB 1223575 - 1223111 - | conjugative pilus assembly protein tchB 1224088 - 1223687 - | hypothetical protein tchA 1224971 - 1224636 - | hypothetical protein int 1226341 - 1225097 - | phage-related integrase rhp7 1226666 - 1226466 - | hypothetical protein TERM 924 1226698 - 1226713 + r 71 -4.8 -4.80959 | opp_overlap 1226698 CTATAAAGTATAGAA GTTAAT AAAA ATTAAC TTTTCTTCTCCCTTA TERM 925 1226928 - 1226944 + r 70 -5.9 -4.30014 | overlap 1226929 CTCTTCTTCATTGAT TTGTTTC TGT GAAACAG TTTTGAGTTGCTCAA TERM 926 1227655 - 1227669 + r 85 -3.6 -5.77988 | CTCACCTTTAGTAGA TCTAGA TAT TTTAGA TTTTTTTATATATCT TERM 927 1227696 - 1227731 + r 87 -11.4 -3.02043 | opp_overlap 1227704 1227705, overlap 1227705 ATCTATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGGACGAAATT TERM 928 1227723 - 1227704 - R 74 -5 -5.00884 | opp_overlap 1227696 1227705, overlap 1227705 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGG TERM 929 1227722 - 1227705 - R 74 -8.5 -3.60048 | opp_overlap 1227696 1227705, overlap 1227704 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 930 1227705 - 1227722 + r 85 -8.5 -4.56883 | opp_overlap 1227705 1227704, overlap 1227696 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 931 1227794 - 1227812 + r 71 -4.6 -4.82901 | overlap 1227796 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA OTBS_1267 1230953 - 1229193 - | hypothetical protein ntrX 1232530 - 1231061 - | NtrX-like response regualator/Sigma54 interactor/HTH, Fis type TERM 932 1232686 - 1232660 - R 77 -5.9 -4.97402 | overlap 1232663 TAAAATTGATAAAAA TTAGTGCTATG CTACT CATAGCACCGA TTAAGACAGGTTTGC TERM 933 1232683 - 1232663 - R 80 -9.8 -3.33589 | overlap 1232660 AATTGATAAAAATTA GTGCTATG CTACT CATAGCAC CGATTAAGACAGGTT ntrY 1234257 - 1232671 - | NtrY-like histidine kinase TERM 934 1233306 - 1233281 - G 73 -9.1 -2.83522 | opp_overlap 1233280, overlap 1233280 1233284 ACTTCTTTACCAAAT TTATCTGCTAG CATA CTAGCAGATAG CTGTATAGGAGTAAG TERM 935 1233303 - 1233284 - G 82 -10.8 -2.67803 | opp_overlap 1233280, overlap 1233281 1233280 TCTTTACCAAATTTA TCTGCTAG CATA CTAGCAGA TAGCTGTATAGGAGT TERM 936 1234317 - 1234333 + r 89 -3.1 -6.28967 | ATATTAAGCAATATT TTTAATG ATA TATTAAA TTTTTTTTATTTATA comEC/rec2 1236969 - 1234921 - | ComEC/Rec2 family protein OTBS_1271 1237887 - 1237129 - | hypothetical protein TERM 937 1238594 - 1238576 - H 71 -4.6 -4.82901 | overlap 1238578 TTCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 938 1238692 - 1238657 - H 87 -11.4 -3.02043 | opp_overlap 1238665 1238666, overlap 1238666 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA GGGACATATATAGAT TERM 939 1238665 - 1238684 + H 74 -5 -5.00884 | opp_overlap 1238657 1238666, overlap 1238666 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 940 1238666 - 1238683 + H 74 -8.5 -3.60048 | opp_overlap 1238666 1238657, overlap 1238665 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 941 1238683 - 1238666 - H 85 -8.5 -4.56883 | opp_overlap 1238665 1238666, overlap 1238657 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 942 1238734 - 1238720 - H 89 -3.6 -6.06529 | GATATATAAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 943 1238814 - 1238788 - H 74 -5.4 -4.96523 | opp_overlap 1238788 1238791, overlap 1238783 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACGGACTTC TERM 944 1239457 - 1239441 - H 70 -5.9 -4.30014 | overlap 1239442 TTGAGCAACTCAAAA CTGTTTC ACA GAAACAA ATCAATGAAGAAGAG rhp6 1241728 - 1242231 + | putative ompA-like autotransporter TERM 945 1243094 - 1243070 - T 71 -6.6 -3.95584 | TTTTGATTAATTAAA TCTCTACTAT GAATT ATAGTAGAAA ATAAGCCTTAAAGCT OTBS_1277 1243246 - 1243076 - | hypothetical protein rhp5 1243875 - 1244240 + | hypothetical protein OTBS_1279 1244599 - 1244853 + | hypothetical protein TERM 946 1246044 - 1246034 - g 71 -5.4 -4.68724 | opp_overlap 1246032 1246034 TTAGGGAATATAAAA GCTA AAT TAGC TGATTTTGACTTGGT hkp29 1244903 - 1246201 + | putative signal transduction histidine kinase TERM 947 1246696 - 1246679 - T 85 -2.7 -5.89921 | AGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTCAAACATTTTATA TERM 948 1246963 - 1246942 - T 72 -6.1 -4.20953 | overlap 1246939 TCAAAAGAACAACAA TATTTTATT TTTA AATAAAATA GCTGGTTCAAAAAAA traD_Ti 1249216 - 1248761 - | conjugative transfer protein TERM 949 1249144 - 1249172 + g 100 -8.9 -5.7946 | GTTCTTTAATTTTAA GGCTAACCTCATC CAT GATTAGCTTAGCC TTTTTTTGTTGGAGA OTBS_1284 1249418 - 1249218 - | hypothetical protein TERM 950 1252017 - 1251997 - R 100 -11.2 -4.2803 | TATTCGAAGGTAAAA TGAGCTGC ATAGA GCAGCTCA AGGGTAATAAAAATA TERM 951 1252675 - 1252651 - R 71 -7.3 -3.76835 | opp_overlap 1252651 1252654 1252658, overlap 1252654 TTGAACAACATAGAA GAATTGATTGT TTT ACAATGAATTC TGACTTGAGAGCAAG TERM 952 1254127 - 1254145 + r 74 -6.8 -4.27316 | overlap 1254119 AGCCAATCTACGCCG TAGTATGT GTG ACGTACTA TTTTCAGTTAAAACA TERM 953 1254490 - 1254480 - R 74 -3.2 -5.48028 | GAAATAAAAAGAAAA GCAA CTG CTGC ACTAGTTCATTTTAT TERM 954 1254607 - 1254587 - R 70 -6.3 -4.10552 | overlap 1254585 1254591 1254598 AATAGCACAAAAAGA TAAAGAAAA TGG CTTTCTTTA CATAAAAGCGTTATT traD_F 1255854 - 1254898 - | conjugative transfer protein traN 1259839 - 1258178 - | conjugative transfer protein TERM 955 1259213 - 1259196 - G 72 -8.5 -3.14795 | overlap 1259194 AAATTTCTACCAATA TGGTGTA TAGA TACACCA AGCCTATTAGCAATA trbC 1260182 - 1259862 - | conjugative transfer protein tchE 1261448 - 1261260 - | hypothetical protein traW 1262190 - 1261531 - | conjugative transfer protein TERM 956 1261586 - 1261596 + g 71 -6.8 -4.00132 | TCTTGCTCTATTATG GCTG GCA CAGC TTGTATTTTAAATTT dam16 1265230 - 1265370 + | site-specific DNA adenine methylase tchA 1266389 - 1266054 - | hypothetical protein TERM 957 1268281 - 1268292 + H 71 -3 -5.33785 | GTCTATTATACTTTT TTTG ATAT CAAA TTTTTTATACTAATT TERM 958 1268566 - 1268581 + H 72 -4.8 -4.95167 | opp_overlap 1268566 CTATAAAGTGTAGAA GTTAAT AAAA ATTAAC TTTTCTTCTTCCTTA TERM 959 1271373 - 1271357 - g 73 -8.1 -3.54574 | overlap 1271366 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA tnD 1270919 - 1271839 + | transposase and inactivated derivative TERM 960 1272981 - 1273009 + F 75 -9.1 -2.91728 | opp_overlap 1272982 1272984, overlap 1272984 GCTATATAGCTCAAG ATATGTATCTTAT TTT ATAAGATACATAA TATACTATTGACAAT TERM 961 1273008 - 1272982 - f 100 -12.6 -3.08934 | opp_overlap 1272981 1272984, overlap 1272984 CTATATAGCTCAAGA TATGTATCTTAT TTT ATAAGATACATA ATATACTATTGACAA TERM 962 1272984 - 1273006 + F 82 -10.8 -2.70232 | opp_overlap 1272982 1272984, overlap 1272981 ATATAGCTCAAGATA TGTATCTTAT TTT ATAAGATACA TAATATACTATTGAC TERM 963 1273006 - 1272984 - f 85 -10.8 -3.10053 | opp_overlap 1272984 1272981, overlap 1272982 ATATAGCTCAAGATA TGTATCTTAT TTT ATAAGATACA TAATATACTATTGAC OTBS_1306 1273081 - 1273650 + | hypothetical protein gpsA 1274895 - 1273903 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 964 1274517 - 1274535 + g 80 -7.6 -4.28548 | opp_overlap 1274516 1274512 CTATGATGAATAAAG GATTATTT GCT AAATAATC TTTTACTACGTCACT miaB 1276229 - 1274958 - | MiaB-like tRNA modifying enzyme TERM 965 1275368 - 1275395 + g 70 -7.2 -3.74025 | gap 1, overlap 1275366 1275363 1275380 ATGATGCATCTGGAA GAATTTTGC-GCA TTT TGTTGCAAAATTC TATTATTTGTTCTCT OTBS_1311 1278356 - 1277748 - | hypothetical protein TERM 966 1278455 - 1278427 - H 72 -2.6 -5.40474 | gap 1, opp_overlap 1278435, overlap 1278435 1278446 ATTCTTCTAAAAAAA CTAGATATGAATT TATC AATTC-TGTCTAG AAAAATGTGAGAGTA OTBS_1312 1278672 - 1279598 + | hypothetical protein TERM 967 1280702 - 1280689 - g 73 -8.1 -3.55604 | opp_overlap 1280673 1280671 1280689, overlap 1280671 1280687 GCAGCTAAGGAAATA GCAGC GCTT GCTGC TTGTCCAGTGCCAGA TERM 968 1280689 - 1280702 + G 71 -8.1 -3.32844 | opp_overlap 1280671 1280689 1280687, overlap 1280673 1280671 GCAGCTAAGGAAATA GCAGC GCTT GCTGC TTGTCCAGTGCCAGA maeA 1279591 - 1280919 + | NADP-dependent malic enzyme OTBS_1317 1282914 - 1282498 - | hypothetical protein TERM 969 1282857 - 1282877 + g 84 -5.6 -5.40873 | GTAACAGTTTTGACT GTATATTT TTATT AAATATAC TTTTATTTTTCTGTT dam17 1283281 - 1284090 + | site-specific DNA adenine methylase rhp6 1284603 - 1284094 - | putative ompA-like autotransporter TERM 970 1286588 - 1286571 - g 76 -8.5 -3.40565 | opp_overlap 1286568 AAGCATTAAGATTAA GCTTAAC GTTT GTTAAGC TGATGCTTCAAGAAA hkp30 1286228 - 1286689 + | putative signal transduction histidine kinase TERM 971 1286667 - 1286701 + T 100 -9.4 -4.39571 | opp_overlap 1286666 1286669, overlap 1286669 1286673 CCATATTTCATATAC CAGTCAGCTTAGCTAA TTG TTAGCTAAGCTTGCTA TTTTAAATTTCTAAA TERM 972 1286669 - 1286699 + T 95 -12 -3.79633 | opp_overlap 1286666 1286669, overlap 1286667 1286673 ATATTTCATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 973 1286699 - 1286669 - T 76 -9.8 -2.69977 | opp_overlap 1286669 1286667 1286673, overlap 1286666 ATATTTCATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 974 1286673 - 1286695 + T 100 -13.6 -3.55453 | opp_overlap 1286669 1286666, overlap 1286669 1286667 TTCATATACCAGTCA GCTTAGCTAA TTG TTAGCTAAGC TTGCTATTTTAAATT traD_Ti 1289359 - 1288961 - | conjugative transfer protein TERM 975 1289097 - 1289119 + g 77 -7.8 -4.13767 | ATGTAGCGCTTAGTG TTTTCATCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 976 1289345 - 1289371 + g 81 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA TERM 977 1295225 - 1295250 + r 71 -4.7 -4.77925 | overlap 1295226 TCTTTACTAATGGCA AGCCTCTAAAA CAGA TTTTTGAGGCC TTTTTAGCGTTTTTT TERM 978 1295226 - 1295249 + r 73 -8.2 -3.44315 | overlap 1295225 CTTTACTAATGGCAA GCCTCTAAAA CAGA TTTTTGAGGC CTTTTTAGCGTTTTT trbC 1299054 - 1298734 - | conjugative transfer protein traV 1300301 - 1300011 - | conjugative transfer protein traB 1300765 - 1300301 - | conjugative pilus assembly protein tchB 1301278 - 1300877 - | hypothetical protein traE 1301826 - 1301275 - | conjugative transfer protein tchA 1302161 - 1301826 - | hypothetical protein int 1303531 - 1302287 - | phage-related integrase rhp7 1303856 - 1303656 - | hypothetical protein TERM 979 1303888 - 1303903 + H 71 -4.8 -4.80959 | opp_overlap 1303888 CTATAAAGTGTAGAA GTTAAT AAAA ATTAAC TTTTCTTCTCCCTTA rhp9 1304309 - 1304725 + | hypothetical protein TERM 980 1306207 - 1306188 - f 77 -8 -4.17316 | ACTTTTTGAAAAGAA GTGTAAAA CTAA TTTTACAC ATTCCCATACTTCAA rhp9 1306423 - 1306713 + | hypothetical protein mreC 1308807 - 1307956 - | rod shape-determining protein mreB 1309881 - 1308814 - | rod shape-determining protein sucB 1310212 - 1309982 - | dihydrolipoamide acetyltransferase component OTBS_1347 1310802 - 1310182 - | hypothetical protein clpP 1313557 - 1312937 - | ATP-dependent protease proteolytic subunit map 1316888 - 1316094 - | methionine aminopeptidase TERM 981 1316732 - 1316716 - G 73 -7.9 -3.63627 | opp_overlap 1316704, overlap 1316701 1316700 1316719 CCTTTATATCCTAAA GGAGCTG GAA CTGCTCC ATGCGATATAATGTA TERM 982 1316834 - 1316848 + g 74 -4.2 -5.24531 | opp_overlap 1316823 TAGATGCTGCAATCT TGCTAG CAG CTCGCA TTTTTTCTAGAAAAT TERM 983 1316926 - 1316912 - H 71 -7.2 -3.82604 | CCATTCAATCAAGAA TTGCTA AAT TAGCAA AACTGAAACTTAAAA TERM 984 1320603 - 1320628 + H 71 -4.7 -4.83615 | overlap 1320604 ATAGCAGGTGGTTCA AGCGGTTTTTG CTTT CAAAAACCACG TTTTTATACCGCGTA TERM 985 1320604 - 1320627 + H 73 -8.2 -3.49687 | overlap 1320603 TAGCAGGTGGTTCAA GCGGTTTTTG CTTT CAAAAACCAC GTTTTTATACCGCGT TERM 986 1321599 - 1321615 + H 74 -2.4 -5.61913 | TTTGTTGAGTCACTG TATTAT ACCAA ATAATA TTTTTTCTGTTTCTT TERM 987 1321907 - 1321895 - H 74 -6.3 -4.42386 | overlap 1321866 CTGTTATGCAGAAAA TCTCT ACC AGAGA AATCATATTAACTTT TERM 988 1322086 - 1322034 - H 100 -13.7 -3.1005 | opp_overlap 1322051, overlap 1322051 AAATATATTCCAACA TTTTTCCTTATATCAAACTCTGGTT TAT ATCCTGAGTTTGATATAAGGAATAG GCTAAGATGTAGGAA TERM 989 1322343 - 1322381 + H 83 -10.1 -3.56092 | gap 1, opp_overlap 1322350, overlap 1322347 1322350 ATTATTATAGTAGTT TCAATAATTTTAATTTTG GTGG CAAAATTAAAATTA-TGA TTTAAAAGATAGTAG TERM 990 1322347 - 1322378 + H 90 -12 -2.91144 | opp_overlap 1322350, overlap 1322343 1322350 TTATAGTAGTTTCAA TAATTTTAATTTTG GTGG CAAAATTAAAATTA TGATTTAAAAGATAG TERM 991 1322350 - 1322375 + H 81 -9.3 -3.60151 | opp_overlap 1322350, overlap 1322347 1322343 TAGTAGTTTCAATAA TTTTAATTTTG GTGG CAAAATTAAAA TTATGATTTAAAAGA TERM 992 1322375 - 1322350 - H 81 -9.3 -3.63991 | opp_overlap 1322350 1322347 1322343 TAGTAGTTTCAATAA TTTTAATTTTG GTGG CAAAATTAAAA TTATGATTTAAAAGA TERM 993 1322677 - 1322702 + H 78 -9.9 -3.14132 | opp_overlap 1322677 1322681, overlap 1322681 TGCAAGTCGAACGAA TTAATGCTGAG CTTG CTTAGCATTAA TTAGTGGCAAACGGG TERM 994 1324095 - 1324076 - H 73 -9.2 -2.65808 | opp_overlap 1324072 1324076, overlap 1324073 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATTACCTCCTTT TERM 995 1324076 - 1324095 + H 85 -11.4 -2.56288 | opp_overlap 1324076 1324073, overlap 1324072 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATTACCTCCTTT czcR 1324959 - 1325696 + | CzcR-like response regulator TERM 996 1325784 - 1325774 - f 70 -4 -4.93365 | TGCTATAATCAAAAA TGTT CTT AACA AAAAAATTATTACTA OTBS_1365 1325832 - 1327568 + | metallo-beta-lactamase family protein gatC 1327651 - 1327950 + | glutamyl-tRNA(Gln) amidotransferase subunit C gatA 1327950 - 1329428 + | aspartyl/glutamyl-tRNA amidotransferase subunit A gatB 1329431 - 1330891 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 997 1331430 - 1331416 - f 95 -7.2 -5.80003 | opp_overlap 1331424 TCAACAAAGAAAAAA GCATAA CTG TTATGC TAACTCTAGTAAAGA TERM 998 1331497 - 1331483 - f 81 -3.6 -5.52023 | ATTATCAAGAAAAAA TAATGT TTA ACACTA TCCATAAAAGCAAAA TERM 999 1332284 - 1332300 + F 70 -3.7 -5.08255 | overlap 1332279 AGTTCTGCAATTTTA GTTGCTA AGC TAGAAAC TTTTGTTTTAAAACT TERM 1000 1332950 - 1332960 + F 70 -4 -4.88067 | GCTAAATTTTCAACG TATG ATT CATA TTTTTGTAAATCAAT TERM 1001 1335018 - 1335068 + F 100 -13.7 -3.70773 | gap 1, opp_overlap 1335033 TATGCCTTCCCTGCT TTTTC-TTATCCTAAACTGGCGTT TAAA AACACCAGATTAGGATAATGAAAA TTATTAAATGTAGCA TERM 1002 1335052 - 1335033 - f 77 -8.6 -3.59979 | opp_overlap 1335018 TTTTCTTATCCTAAA CTGGCGTT TAAA AACACCAG ATTAGGATAATGAAA OTBS_1372 1335617 - 1336312 + | hypothetical protein TERM 1003 1338900 - 1338884 - f 71 -2.3 -5.38951 | opp_overlap 1338884, overlap 1338891 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTATCAAAGAAAAAA TERM 1004 1339371 - 1339383 + F 90 -6.3 -5.51165 | opp_overlap 1339370 1339371 CATAATATACAAAAC CAACT CAA AGTTG TTTTTTTAAGATTTT TERM 1005 1340296 - 1340349 + G 100 -15.1 -2.56514 | opp_overlap 1340298 1340299 1340312, overlap 1340309 1340312 ATAATACTAAGCTTA AAGTCTTTAATAATAACATTATCTC TACT GAGATAATGTTATTATTAAAGATAA ATGATTTTGTTAATT TERM 1006 1340347 - 1340298 - g 100 -19.9 -3.69092 | opp_overlap 1340296 1340309 1340312, overlap 1340299 1340312 AATACTAAGCTTAAA GTCTTTAATAATAACATTATCTC TACT GAGATAATGTTATTATTAAAGAT AAATGATTTTGTTAA TERM 1007 1340346 - 1340299 - g 100 -23.4 -2.80732 | opp_overlap 1340296 1340309 1340312, overlap 1340298 1340312 ATACTAAGCTTAAAG TCTTTAATAATAACATTATCTC TACT GAGATAATGTTATTATTAAAGA TAAATGATTTTGTTA TERM 1008 1340309 - 1340336 + G 100 -13 -3.63694 | opp_overlap 1340299 1340298 1340312, overlap 1340296 1340312 TAAAGTCTTTAATAA TAACATTATCTC TACT GAGATAATGTTA TTATTAAAGATAAAT TERM 1009 1340312 - 1340333 + G 89 -10.3 -3.95324 | opp_overlap 1340299 1340298 1340312, overlap 1340309 1340296 AGTCTTTAATAATAA CATTATCTC TACT GAGATAATG TTATTATTAAAGATA TERM 1010 1340333 - 1340312 - g 89 -10.3 -3.94877 | opp_overlap 1340312 1340309 1340296, overlap 1340299 1340298 AGTCTTTAATAATAA CATTATCTC TACT GAGATAATG TTATTATTAAAGATA OTBS_1376 1339446 - 1340840 + | hypothetical protein TERM 1011 1342193 - 1342183 - g 70 -4 -4.99035 | opp_overlap 1342183 CCACGTATACAAAAA TTTC TAG GAAA ATTATCAGTAGCAGA TERM 1012 1344868 - 1344889 + G 72 -6 -4.42062 | AGTAATCCAGCACTG TATCAAGT TATTTT ACTTGATA TTTCTTTACCAGATA OTBS_1379 1341886 - 1345143 + | Na+/proline symporter/histidine kinase/response regualator receivor domain-containing protein TERM 1013 1349115 - 1349099 - f 71 -2.3 -5.38951 | overlap 1349106 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA ccmA 1353712 - 1354317 + | cytochrome c biogenesis protein CcmA ccmB 1354314 - 1354964 + | heme exporter protein B OTBS_1395 1355118 - 1356257 + | hypothetical protein petA 1356342 - 1357034 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 1014 1358084 - 1358104 + G 77 -9.1 -3.25653 | CAATCCTAAGAGCTG TTCCTTCAA AAC TTGGAGGAA TTACATTAATGTTTT petB 1357189 - 1358385 + | ubiquinol-cytochrome c reductase, cytochrome b TERM 1015 1358491 - 1358481 - T 72 -4 -5.05153 | opp_overlap 1358481 ACTTGAAAAAAGAAA CAAA AAT TTTG TTATGCTTAAAAACA OTBS_1399 1358947 - 1358798 - | hypothetical protein TERM 1016 1360038 - 1360019 - g 87 -10.8 -3.48718 | overlap 1360017 CCGAAGTAAAAGATA TGCTGGAA AAAC TTCCAGCA GTTAAGAAGTATATT TERM 1017 1360857 - 1360839 - g 70 -7.4 -3.64103 | opp_overlap 1360852 TAGTCACATCTTAAA TGGAGCTG GTG CAGCTGCA GCAGAAGCTTTAGAA rhp2 1360018 - 1362366 + | hypothetical protein TERM 1018 1362459 - 1362481 + T 80 -6.4 -4.91109 | overlap 1362452 1362463 CAGATTATGTAACTG TTACTCATCT ACA AGATGATTAA TTTTTATAATACAAG TERM 1019 1362463 - 1362477 + T 74 -7.2 -3.89607 | overlap 1362459 TTATGTAACTGTTAC TCATCT ACA AGATGA TTAATTTTTATAATA TERM 1020 1363353 - 1363376 + T 90 -11 -3.60627 | opp_overlap 1363353, overlap 1363352 TAGTTGGATTTATAA CAGCTTCAGC TGGT GCTGTAGCTG TTTCAACTCCAATAA TERM 1021 1363376 - 1363353 - T 87 -11 -3.35996 | opp_overlap 1363352 1363353 TAGTTGGATTTATAA CAGCTTCAGC TGGT GCTGTAGCTG TTTCAACTCCAATAA TERM 1022 1364344 - 1364361 + T 72 -4.9 -5.00895 | overlap 1364345 TTTCTATAATATGTC TTTTGCT AAGA AGCAAAG TTTTTATATGATGAA TERM 1023 1364712 - 1364748 + T 93 -5.6 -5.92399 | opp_overlap 1364712 GCATATCAGAAAAAA TAATTTTATAAAAA CCTGCATTT TTTTTATAAAATTA TTTTTTCTTTTCTTA TERM 1024 1364748 - 1364712 - T 85 -5.6 -5.34555 | opp_overlap 1364712 GCATATCAGAAAAAA TAATTTTATAAAAA CCTGCATTT TTTTTATAAAATTA TTTTTTCTTTTCTTA TERM 1025 1365338 - 1365328 - T 72 -5.4 -4.79955 | AGATTGACAATAAAA TAGC TTA GCTA AAAAGTAAAGCCTGC OTBS_1407 1365538 - 1365398 - | hypothetical protein OTBS_1408 1366420 - 1365614 - | Uracil-DNA glycosylase TERM 1026 1368037 - 1368022 - H 72 -4.8 -4.95167 | opp_overlap 1368022 TAAGGAAGAAGAAAA GTTAAT TTTT ATTAAC TTCTACACTTTATAG int 1368394 - 1369638 + | phage-related integrase TERM 1027 1369799 - 1369744 - T 100 -12.2 -3.11173 | opp_overlap 1369752, overlap 1369750 1369752 1369757 AGATAATTTAGCTAA TTTAAACATTATAGTAGCAGAATGAG ATTT CTCATTCTGCTACTGCGATTTTCAAA AATTTACAAAATCTA TERM 1028 1369793 - 1369750 - T 80 -9 -3.76952 | opp_overlap 1369752, overlap 1369744 1369752 1369757 TTTAGCTAATTTAAA CATTATAGTAGCAGAATGAG ATTT CTCATTCTGCTACTGCGATT TTCAAAAATTTACAA TERM 1029 1369752 - 1369791 + T 100 -13.8 -4.12942 | opp_overlap 1369752 1369750 1369744 1369757 TAGCTAATTTAAACA TTATAGTAGCAGAATGAG ATTT CTCATTCTGCTACTGCGA TTTTCAAAAATTTAC TERM 1030 1369791 - 1369752 - T 93 -11.6 -3.46783 | opp_overlap 1369752, overlap 1369750 1369744 1369757 TAGCTAATTTAAACA TTATAGTAGCAGAATGAG ATTT CTCATTCTGCTACTGCGA TTTTCAAAAATTTAC TERM 1031 1369786 - 1369757 - T 100 -18.1 -2.98137 | opp_overlap 1369752, overlap 1369752 1369750 1369744 AATTTAAACATTATA GTAGCAGAATGAG ATTT CTCATTCTGCTAC TGCGATTTTCAAAAA TERM 1032 1371988 - 1371972 - T 71 -2.3 -5.38951 | overlap 1371979 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA argB 1373175 - 1372234 - | acetylglutamate kinase uvrA 1373683 - 1373123 - | GTP-binding protein TERM 1033 1373746 - 1373772 + r 86 -9.8 -3.80733 | opp_overlap 1373758 ATATAACTTCTTTCA TTTATTATTAAT CTT ATTAATAATAAA TTGTTGTACAATGGA yidC 1375446 - 1373743 - | putative inner membrane protein translocase component YidC TERM 1034 1374059 - 1374020 - G 85 -11 -3.27146 | gap 1, overlap 1374023 AATAGGTTAAATATA CAAGTTGGATC-AAGAGCT GAT AGATCTTTGATCCAACTTA AAAAAGGAGCATGCC TERM 1035 1374056 - 1374023 - G 89 -10.5 -3.76634 | gap 1, overlap 1374020 AGGTTAAATATACAA GTTGGATC-AAGAGCT GAT AGATCTTTGATCCAAC TTAAAAAAGGAGCAT TERM 1036 1374846 - 1374865 + g 77 -8.6 -3.63694 | opp_overlap 1374846 GACCATGAAATTGAA CAGCAAGT TGTT GCTTGCTG TTATTAACAATCGAT atrC1 1378611 - 1377193 - | cationic amino acid transporter-1 TERM 1037 1377869 - 1377880 + g 70 -4.4 -4.8143 | opp_overlap 1377869 ATGCCTACTGTCAAA TCCT TTGT AGGA TTTTTACATTCTTCA TERM 1038 1378260 - 1378244 - G 83 -10.9 -2.79023 | overlap 1378241 TAAGCTGACCAACTA GCTGCTA CAG TAGCAGC ACCAAATGTTAATTC TERM 1039 1378849 - 1378860 + H 86 -3 -5.97575 | GCTGCAAATTTAGTA CTTT TTGT AAAG TTTTTTTTATAGATT OTBS_1418 1379020 - 1379427 + | hypothetical protein gyrB 1381880 - 1379457 - | DNA gyrase subunit B OTBS_1420 1381997 - 1382857 + | HAD family hydrolase mnhG 1383420 - 1383749 + | multisubunit Na+/H+ antiporter, MnhG subunit TERM 1040 1384083 - 1384102 + G 76 -7.2 -4.31904 | TTTGCAGCTTACTAT GTATACTG TTTG CAGTATGC TTTATGTTAGTTTGT mbhE 1383746 - 1384336 + | multisubunit Na+/H+ antiporter, membrane bound hydrogenase, MbhE subunit mnhB 1384357 - 1384791 + | multisubunit Na+/H+ antiporter, MnhB subunit TERM 1041 1384891 - 1384907 + G 76 -3.7 -5.38047 | TGGCTTAGCAGTATT TCAAAAC TCT GTCTTGA TTTTTTATATAGCTC mnhC 1384769 - 1385170 + | multisubunit Na+/H+ antiporter, MnhC subunit nuoN2 1385163 - 1386653 + | putative monovalent cation/H+ antiporter subunit D TERM 1042 1386797 - 1386820 + G 70 -8.2 -3.1478 | opp_overlap 1386797 1386792 1386790, overlap 1386796 1386811 1386813 TAAAGAAATATTAAT GCTTGCAATA TCCA TATTGCATGC TATTAATGCAATACT TERM 1043 1387011 - 1386999 - g 71 -7.7 -3.53091 | ATTGGTTTTTTGAAA GCTCA TAG TGAGC CAAATCAGGCTAAAT nuoL2 1386663 - 1388135 + | NADH dehydrogenase I chain L TERM 1044 1389359 - 1389340 - f 70 -5 -4.66537 | opp_overlap 1389340, overlap 1389355 CTGTTCAACAGAAAA TTGGCCTT AAAC AACGCCAA TTTAGGATAAGTGGC TERM 1045 1390972 - 1390990 + F 70 -5.2 -4.52345 | opp_overlap 1390971, overlap 1390973 1390976 AGTTATTTCATCAAC TGTTGACC AAT GGTCTACG TTTATTTACTAATCT TERM 1046 1391049 - 1391065 + F 73 -8.1 -3.46081 | opp_overlap 1391049 1391048 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCCTTAATTGAGTC dam21 1391245 - 1391685 + | site-specific DNA adenine methylase TERM 1047 1391846 - 1391832 - T 81 -3.6 -5.52023 | ATTATCAAGAAAAAA TAATGT TTA ACACTA TCCATAAGCAAAAAA ank2A7 1394113 - 1391975 - | ankyrin repeat-containing protein TERM 1048 1392438 - 1392457 + g 79 -7.2 -4.43173 | TTAGGAAGGCGATAT GTATTCGG AAAA CTGAATAC TTTTAGGTTATTTTT TERM 1049 1392547 - 1392570 + g 73 -8.3 -3.5275 | opp_overlap 1392544 1392551, overlap 1392551 TTAAAAAATCAATGT CAAATGGAA GTACTA TTCCATTTG TTAGTTCTATAATTT TERM 1050 1394258 - 1394230 - H 79 -7.6 -4.32607 | opp_overlap 1394232, overlap 1394232 GGAAAAGTGAACAAA CAGCTAACTTAA TAAAT TCAAGTTAGCTA TAATAACCAGAATTT TERM 1051 1394256 - 1394232 - H 74 -8 -3.75005 | opp_overlap 1394232, overlap 1394230 AAAAGTGAACAAACA GCTAACTTAA TAAAT TCAAGTTAGC TATAATAACCAGAAT TERM 1052 1395091 - 1395107 + H 71 -7.3 -3.80858 | opp_overlap 1395091 1395087 1395094 ACTTTGAACAATATA GAGTTAG AAC CTAGCTC TTTACTAAGTTCTGA TERM 1053 1395670 - 1395684 + H 74 -8.6 -3.3375 | opp_overlap 1395667 1395663, overlap 1395668 1395683 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGTGTTAGT TERM 1054 1396063 - 1396082 + H 90 -10.8 -3.65581 | opp_overlap 1396049 ATGTAGCTGCAATTT TTTGCAGG TTCA CCTGCAAA TTCTTGCAAATTGAT TERM 1055 1396118 - 1396136 + H 87 -2.4 -6.20267 | AATTTTTTTGTTGTA GAAGGACA ATT TTTTCTTC TTTTTTTCTTTTTCA TERM 1056 1396146 - 1396166 + H 100 -9.1 -5.08011 | TTCTTCTTTTTTTCT TTTTCAGTG GAA CGCTGAAAA TTTTTTAGAAGTTTT TERM 1057 1396505 - 1396486 - H 86 -6.4 -5.4588 | opp_overlap 1396486 1396497 TAAAACGATAAAAAA CAGTTGCA TTAT TGCTACTG TTATTATTAGCAATT TERM 1058 1396662 - 1396642 - H 79 -8.4 -3.96148 | TTTTTTTAGCACAAA TGTAGCAA TTTTG TTGCTACA CTCGAAATTTAACGC TERM 1059 1396703 - 1396753 + H 100 -13.1 -3.6682 | opp_overlap 1396713, overlap 1396706 TTATAATAACTTAAG TAGTTTTAAACTATACATCTATA TCGTC TATAGATGTATAGTTTAAGATGA TTTAACTAACTAGAA TERM 1060 1396706 - 1396750 + H 100 -17 -2.9462 | opp_overlap 1396713, overlap 1396703 TAATAACTTAAGTAG TTTTAAACTATACATCTATA TCGTC TATAGATGTATAGTTTAAGA TGATTTAACTAACTA TERM 1061 1396743 - 1396713 - H 100 -12.9 -3.59315 | opp_overlap 1396706 1396703 TTAAGTAGTTTTAAA CTATACATCTATA TCGTC TATAGATGTATAG TTTAAGATGATTTAA tchA 1398553 - 1398888 + | hypothetical protein tchB 1399437 - 1399838 + | hypothetical protein traB 1399950 - 1400414 + | conjugative pilus assembly protein traV 1400414 - 1400704 + | conjugative transfer protein trbC 1401661 - 1401981 + | conjugative transfer protein traF 1403675 - 1404379 + | conjugative pilus assembly protein traD_F 1405801 - 1406946 + | conjugative transfer protein tnE 1407859 - 1406948 - | transposase and inactivated derivative TERM 1062 1407511 - 1407537 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTATAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT TERM 1063 1407656 - 1407645 - G 73 -4.4 -5.08878 | opp_overlap 1407645, overlap 1407640 AATATATAAATAAAA GCAT TGCC ATGC TTTTTGGTTGCAACT TERM 1064 1407645 - 1407656 + g 70 -4.4 -4.86621 | opp_overlap 1407645 1407640 AATATATAAATAAAA GCAT TGCC ATGC TTTTTGGTTGCAACT TERM 1065 1407673 - 1407691 + g 72 -2.5 -5.43866 | gap 1 TTTTGGTTGCAACTT TATAGACG ATAT CG-CTATA TTTTTTTAACGATTC TERM 1066 1409871 - 1409891 + H 100 -11.2 -4.2803 | TATTTTTATTACCCT TGAGCTGC TCTAT GCAGCTCA TTTTACCTTCGAATA TERM 1067 1412737 - 1412711 - H 83 -3 -5.7946 | TCTCCAACAAAAAAA GCTAAGCTAATC ATG GATGAGGTTAAC CTCAAAATCAAAGAA TERM 1068 1412985 - 1412963 - g 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGATGAAAA CACTAAGCGCTACAT traD_Ti 1412723 - 1413121 + | conjugative transfer protein TERM 1069 1413505 - 1413493 - g 75 -4.9 -5.04868 | CCAAAGCAAACAAAA TGTAT TAT ATACA CAAGTAAGTTTTACT rhp4 1413209 - 1413787 + | hypothetical protein spoT31 1414440 - 1413865 - | spoT-like ppGpp hydrolase TERM 1070 1413964 - 1413977 + g 71 -3.1 -5.16237 | TTGCTGAGTTTCAAT GACGA TTTT TTGTC TTTTTTCATAAGGTT TERM 1071 1414080 - 1414097 + g 72 -2.7 -5.33848 | TATAAAATGTTTGAA TCATTTC TCCA GAACTGA TTTTTTGATTATCCT hkp31 1416142 - 1414541 - | putative signal transduction histidine kinase TERM 1072 1414698 - 1414708 + g 71 -5.4 -4.68724 | opp_overlap 1414696 1414698 ACCAAGTCAAAATCA GCTA ATT TAGC TTTTATATTCCCTAA OTBS_1456 1417306 - 1419174 + | hypothetical protein rhp5 1419594 - 1419418 - | hypothetical protein TERM 1073 1419952 - 1419971 + r 71 -2.2 -5.38348 | opp_overlap 1419946 1419965, overlap 1419946 1419963 1419965 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT TERM 1074 1420098 - 1420122 + r 71 -6.6 -3.95584 | AGCTTTAAGGCTTAT TTTCTACTAT AATTC ATAGTAGAGA TTTAATTAATCAAAA rhp6 1421463 - 1420960 - | putative ompA-like autotransporter TERM 1075 1423734 - 1423750 + r 70 -5.9 -4.30014 | overlap 1423735 CTCTTCTTCATTGAT TTGTTTC TGT GAAACAG TTTTGAGTTGCTCAA TERM 1076 1424377 - 1424403 + r 74 -5.4 -4.96523 | opp_overlap 1424377 1424389, overlap 1424390 GAAGTCCGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 1077 1424457 - 1424471 + r 89 -3.6 -6.06529 | CTCACCTTCAGTAGA TCTAGA TAT TTTAGA TTTTTTTTATATATC TERM 1078 1424499 - 1424534 + r 87 -11.4 -3.02043 | opp_overlap 1424507 1424508, overlap 1424508 ATCTATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGGACGAAATT TERM 1079 1424526 - 1424507 - R 74 -5 -5.00884 | opp_overlap 1424499 1424508, overlap 1424508 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGG TERM 1080 1424508 - 1424525 + r 85 -8.5 -4.56883 | opp_overlap 1424507 1424508, overlap 1424499 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 1081 1424525 - 1424508 - R 74 -8.5 -3.60048 | opp_overlap 1424508 1424499, overlap 1424507 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 1082 1424597 - 1424615 + r 71 -4.6 -4.82901 | overlap 1424599 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGAA OTBS_1463 1425314 - 1425096 - | hypothetical protein TERM 1083 1426160 - 1426195 + r 87 -11.4 -3.01791 | opp_overlap 1426168 1426169, overlap 1426169 ATCTATATATGTCTC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGGACGAAAAT TERM 1084 1426187 - 1426168 - R 74 -5 -5.00884 | opp_overlap 1426160 1426169, overlap 1426169 ATGTCTCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGG TERM 1085 1426186 - 1426169 - R 74 -8.5 -3.60048 | opp_overlap 1426169 1426160, overlap 1426168 TGTCTCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 1086 1426169 - 1426186 + r 85 -8.5 -4.56883 | opp_overlap 1426168 1426169, overlap 1426160 TGTCTCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG OTBS_1467 1429820 - 1428462 - | hypothetical protein OTBS_1468 1430554 - 1429874 - | hypothetical protein traD_F 1434488 - 1433607 - | conjugative transfer protein traN 1438281 - 1436620 - | conjugative transfer protein TERM 1087 1437655 - 1437638 - G 72 -8.5 -3.14795 | overlap 1437636 AAATTTCTACCAATA TGGTGTA TAGA TACACCA AGCCTATTAGCAATA trbC 1438624 - 1438304 - | conjugative transfer protein tchE 1439890 - 1439702 - | hypothetical protein traW 1440632 - 1439973 - | conjugative transfer protein TERM 1088 1440028 - 1440038 + g 71 -6.8 -4.00132 | TCTTGCTCTATTATG GCTG GCA CAGC TTGTATTTTAAATTT ccmF 1446505 - 1444619 - | cytochrome c-type biogenesis TERM 1089 1445445 - 1445428 - G 72 -3.5 -5.26918 | ATATTGGATAAAAAA TAGCAAT GAAA ATTACTA TAAGTGCTGATAACC corB 1447763 - 1446495 - | Mg2+/Co2+ transporter TERM 1090 1448172 - 1448198 + H 72 -8.9 -2.91997 | gap 1, opp_overlap 1448176, overlap 1448169 CTTAAAGAGGCTTGA GTAATGTGATGC CAAA GCATCACA-TAC TAGTTGTATATCCAG TERM 1091 1448195 - 1448176 - H 85 -10.8 -3.15427 | opp_overlap 1448172 1448169 AAGAGGCTTGAGTAA TGTGATGC CAAA GCATCACA TACTAGTTGTATATC sodB 1449292 - 1449933 + | superoxide dismutase TERM 1092 1450059 - 1450092 + G 74 -3.1 -5.41143 | opp_overlap 1450061 1450063, overlap 1450063 1450090 ATCAAAAATATCTTA AAGATCCAGCTTCTA TAGA TAGCAGCTGGATTAC TTTTTTTCAAGAGTA TERM 1093 1450090 - 1450061 - g 73 -7.9 -3.73294 | opp_overlap 1450059 1450063, overlap 1450063 CAAAAATATCTTAAA GATCCAGCTTCTA TAGA TAGCAGCTGGATT ACTTTTTTTCAAGAG TERM 1094 1450088 - 1450063 - g 85 -10.5 -3.42976 | opp_overlap 1450059 1450063, overlap 1450061 AAAATATCTTAAAGA TCCAGCTTCTA TAGA TAGCAGCTGGA TTACTTTTTTTCAAG TERM 1095 1450063 - 1450088 + G 91 -10.5 -4.03885 | opp_overlap 1450063 1450061, overlap 1450059 AAAATATCTTAAAGA TCCAGCTTCTA TAGA TAGCAGCTGGA TTACTTTTTTTCAAG TERM 1096 1450283 - 1450258 - g 74 -7.6 -3.7732 | opp_overlap 1450252, overlap 1450279 TCTTGATAGTAATAA GCAGCTGATT AATTTG AAACAGCTGC AAATTCAGCAATTAA TERM 1097 1450721 - 1450746 + G 74 -9.1 -3.02263 | ATTCAAGGAGCTGAA GCGTCAATAGC TGCG GTTATTGATGC TATTGAACAAGCTAT TERM 1098 1452563 - 1452549 - g 72 -2.8 -5.48028 | opp_overlap 1452549 GAAATAAAAATAAAA TTGCAA ATG TAGCAA TTATTAGAATAGAAC kgd 1449974 - 1452865 + | alpha-ketoglutarate decarboxylase TERM 1099 1453608 - 1453632 + G 74 -2.9 -5.4505 | opp_overlap 1453608 ATTTGAAAAAAAACA TGAAATTAAAC TTG GTTTTATGTCA TTTTTTGTTAAAGCA TERM 1100 1453732 - 1453708 - g 71 -8.7 -2.94416 | GATGGTTATGACATA CTATATCACAA TTA CTGCGATATAG GAGTAGCAGTAAGTA TERM 1101 1453992 - 1453976 - g 78 -6.6 -4.4715 | opp_overlap 1453975 TGGGAATGCATAAAA TACAGG ACAGG CCTGTA GTAATTAATGGCACT sucB 1452865 - 1454142 + | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase TERM 1102 1454172 - 1454161 - g 71 -3 -5.3104 | opp_overlap 1454161 TTATGAAAAAGAAAA TAAC TATT GTTA TTATAGTATTAGTAG OTBS_1492 1454148 - 1455626 + | hypothetical protein TERM 1103 1456832 - 1456852 + G 85 -2.5 -6.19302 | overlap 1456834 GCTCAGTTGCTGCTA CAGTAATTG CGG CAGTTGCAG TTTTTTTTCTTATGT proP 1455919 - 1457220 + | proline/betaine transporter OTBS_1494 1457378 - 1457626 + | hypothetical protein coxC 1458918 - 1458094 - | cytochrome c oxidase subunit III ruvB 1460077 - 1459100 - | Holliday junction DNA helicase B TERM 1104 1459328 - 1459353 + g 82 -7.8 -4.41302 | opp_overlap 1459320 1459325 TAATTTATCAATTCC TAACTGATTA AGAGCA TAATCAGTTA TTTGTTGATTTAATG ruvA 1460694 - 1460077 - | Holliday junction DNA helicase motor protein TERM 1105 1460833 - 1460859 + r 100 -11.8 -3.90511 | opp_overlap 1460827 1460837, overlap 1460829 1460829 1460837 1460844 ATAAAAGCATGGCAT TAAATGCTAGTT AAA AACTAGCATTTG TTAATTTTTATAGTT TERM 1106 1460837 - 1460855 + r 100 -10.4 -4.52042 | opp_overlap 1460827 1460837, overlap 1460829 1460833 1460829 1460844 AAGCATGGCATTAAA TGCTAGTT AAA AACTAGCA TTTGTTAATTTTTAT TERM 1107 1460855 - 1460837 - R 89 -10.4 -3.75437 | opp_overlap 1460829 1460837 1460833 1460829 1460844, overlap 1460827 AAGCATGGCATTAAA TGCTAGTT AAA AACTAGCA TTTGTTAATTTTTAT OTBS_1498 1463080 - 1460939 - | hypothetical protein TERM 1108 1463115 - 1463144 + r 71 -2.3 -5.40072 | overlap 1463108 1463117 TTTCAATTTTTGCAG AACTATAGTATTT ATGC AAATATTATGGTA TTTTTTTAAAAAAAG TERM 1109 1463183 - 1463167 - R 74 -2.3 -5.62552 | overlap 1463160 1463169 1463170 AAAAAAAGCAAAAAA TACTCAT TTT ATGAACA TAATTTACAAGCTAA bcr 1464663 - 1463464 - | Bcr/CflA subfamily drug resistance transporter TERM 1110 1464048 - 1464067 + g 75 -8 -3.65224 | TGTTAACAAGCGCAT TCTTAAAG CCAA CTTTAAGA TTATTAAAATCAAAT TERM 1111 1464747 - 1464757 + H 82 -4 -5.55769 | TAAGTATTAATAGAT TAGT TAT ACTA TTTTTTATTCTGAAG TERM 1112 1466403 - 1466372 - H 74 -9 -3.31177 | opp_overlap 1466372, overlap 1466370 1466368 GACAATGCAAATATA TTATATCACTAATT AATT AATAAGTGATATAA TTAATTAAAAAAAGA TERM 1113 1466372 - 1466403 + H 74 -9 -3.33696 | opp_overlap 1466370 1466368 1466372 GACAATGCAAATATA TTATATCACTAATT AATT AATAAGTGATATAA TTAATTAAAAAAAGA TERM 1114 1467810 - 1467820 + G 74 -4 -5.14563 | opp_overlap 1467806 TCTCAACTACATTTA TTTG GAA CAAA TTTTTTAATGCAGCA OTBS_1503 1466525 - 1469962 + | Na+/proline symporter/histidine kinase/response regualator receivor domain-containing protein TERM 1115 1470229 - 1470214 - f 71 -4.8 -4.80959 | opp_overlap 1470214 TAAGGGAGAAGAAAA GTTAAT TTTT ATTAAC TTCTATACTTTATAG rhp7 1470261 - 1470461 + | hypothetical protein int 1470586 - 1471830 + | phage-related integrase tchA 1471956 - 1472291 + | hypothetical protein traE 1472291 - 1472842 + | conjugative transfer protein tchB 1472839 - 1473240 + | hypothetical protein traB 1473391 - 1473816 + | conjugative pilus assembly protein traV 1473816 - 1474106 + | conjugative transfer protein trbC 1475063 - 1475383 + | conjugative transfer protein traD_F 1479205 - 1480350 + | conjugative transfer protein tnE 1481263 - 1480352 - | transposase and inactivated derivative TERM 1116 1480915 - 1480941 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTATAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT TERM 1117 1481060 - 1481049 - G 73 -4.4 -5.08878 | opp_overlap 1481049, overlap 1481044 AATATATAAATAAAA GCAT TGCC ATGC TTTTTGGTTGCAACT TERM 1118 1481049 - 1481060 + g 70 -4.4 -4.86621 | opp_overlap 1481044 1481049 AATATATAAATAAAA GCAT TGCC ATGC TTTTTGGTTGCAACT TERM 1119 1481077 - 1481095 + g 72 -2.5 -5.43866 | gap 1 TTTTGGTTGCAACTT TATAGACG ATAT CG-CTATA TTTTTTTAACGATTC TERM 1120 1482543 - 1482576 + H 100 -10.7 -4.13767 | ATAATCGCATTGCTT TATTTATCAATTTAA TATA TTAGATTGATAAATA TTTTAGGGTGACAAA TERM 1121 1483080 - 1483066 - g 76 -8.6 -3.55071 | opp_overlap 1483068 GGACATTTGGGGAAA TACTGC TTT GCAGTA TGCTGCAGAATGCGG ank1A2 1482584 - 1484236 + | ankyrin repeat-containing protein TERM 1122 1487519 - 1487493 - Tf 83 -3 -5.7946 | TCTCCAACAAAAAAA GCTAAGCTAATC ATG GATGAGGTTAAC CTCAAAATCAAAGAA TERM 1123 1487767 - 1487745 - gT 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGATGAAAA CACTAAGCGCTACAT OTBS_1524 1488098 - 1487853 - | hypothetical protein traD_Ti 1487505 - 1487903 + | conjugative transfer protein lipB 1491734 - 1491108 - | lipoyltransferase TERM 1124 1491621 - 1491607 - G 70 -7.2 -3.58864 | CCAGCAGTATAAACA TCTTGA TGC TCAAGA ATAAATACAGCTTCT TERM 1125 1491645 - 1491627 - G 72 -6 -4.45068 | ATGCTCAAGAATAAA TACAGCTT CTG AAGCAGTA CCGTTTAGTATTCCT murD 1491817 - 1493235 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 1493242 - 1494369 + | cell division protein TERM 1126 1494547 - 1494531 - g 70 -8.1 -3.07487 | opp_overlap 1494534, overlap 1494530 1494539 TTATAGTTTTAAAAT CCATATT ATG AATATGG TATCCATCTCTAATA TERM 1127 1494749 - 1494763 + G 86 -5.7 -5.45726 | AAAACAGTGTTTTAG GCCTA GCTAA TAGGC TTTTTTTAAGATATG murG 1494373 - 1495452 + | N-acetylglucosaminyl transferase TERM 1128 1496258 - 1496246 - T 72 -6.3 -4.23615 | opp_overlap 1496245 AGCAGATGGAATAAA GCAAA AGC TTTGC AATGTTTGCTTACAC TERM 1129 1497555 - 1497571 + T 71 -2.3 -5.38951 | opp_overlap 1497555, overlap 1497552 TTTTTTCTTTAGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT lysC 1499803 - 1498589 - | aspartate kinase OTBS_1538 1500581 - 1500084 - | hypothetical protein TERM 1130 1500155 - 1500173 + g 83 -4.6 -5.63103 | TTTTGCAGTGCAACT TGCACA TTAAAGC TGTGCA TTTTTTTAATTCACA kefB 1502304 - 1500562 - | glutathione-regulated potassium-efflux system protein TERM 1131 1500768 - 1500780 + g 70 -6.3 -4.21936 | GTTCATTAGAGCGCT GCAAA TCT TTTGC TTTTACAATTATAGC TERM 1132 1501570 - 1501558 - G 82 -7.7 -4.45117 | TATACCTGAAACAAA TGCAC CTA GTGCA AGTGATAAACCCTGA TERM 1133 1502216 - 1502226 + g 70 -4 -5.02476 | opp_overlap 1502216 TATCCAAGTACAGGA CTAA GCT TTAG TTTTTTAAAAACTAT TERM 1134 1502567 - 1502556 - g 73 -4.4 -5.05712 | overlap 1502557 ATAAACAATTAAAAA GTTG TTGT CAAC AAAGCCATCAAATCT ygfA 1502477 - 1503049 + | 5-formyltetrahydrofolate cyclo-ligase OTBS_1541 1503046 - 1503657 + | hypothetical protein TERM 1135 1506455 - 1506477 + G 76 -7.2 -4.1891 | opp_overlap 1506455 GCTTGTATTCAAAAA TTTATGATGA TAA TCATTATAAA TTTATATTCAAGGAA TERM 1136 1506925 - 1506914 - g 81 -3 -5.77571 | ATGAAAAAATAAAAA CTTT CAAA AAAG AATTAGCAAGCAAGG OTBS_1545 1505209 - 1507800 + | hypothetical protein OTBS_1546 1507835 - 1510324 + | hypothetical protein rhp7 1513210 - 1513010 - | hypothetical protein TERM 1137 1513242 - 1513257 + r 71 -4.8 -4.80959 | opp_overlap 1513242 CTATAAAGTATAGAA GTTAAT AAAA ATTAAC TTTTCTTCTCCCTTA rne 1516673 - 1514646 - | ribonuclease E TERM 1138 1515326 - 1515341 + g 75 -4.8 -5.08011 | CTTGTATTTTTGCTT TATCTT TAGC AAGATA TTTTTTGAAGCTTTT TERM 1139 1518977 - 1518961 - g 72 -5.9 -4.53303 | opp_overlap 1518961 TACTTTTAGACAAAA TACCATA AAG CATGGTA TTAATGTAGCAACCA spoT33 1517444 - 1521610 + | spoT-like ppGpp synthetase rhp2 1522052 - 1524043 + | hypothetical protein OTBS_1561 1527127 - 1526234 - | hypothetical protein ubiB 1529507 - 1528128 - | ubiquinone biosynthesis protein, 2-polyprenylphenol 6-hydroxylase OTBS_1564 1528144 - 1528311 + | hypothetical protein ubiE 1530277 - 1529504 - | ubiquinone/menaquinone biosynthesis methlytransferase TERM 1140 1529775 - 1529765 - G 88 -6.8 -5.19879 | opp_overlap 1529764 CTCTAAACATAAAAA CTGG CCA CCAG GCTTTAAAACTCGGT TERM 1141 1530174 - 1530203 + g 71 -2.3 -5.50499 | gap 1 TAATGCTGAGTAACA GAATCAAATACGTT GGC AAC-TAATTGGTTC TTTTTTTCACTATCA yhbC 1530871 - 1531353 + | hypothetical protein nusA 1531369 - 1532871 + | transcription elongation factor NusA TERM 1142 1533038 - 1533007 - f 74 -7.6 -3.7829 | gap 1, opp_overlap 1533012 1533014 1533024, overlap 1533012 1533024 ATTAGACGCAGCAAA TAAAATACT-AGTAC AAA GTACTCAGTACTTTA AGTTAAAAAATCCTG TERM 1143 1533033 - 1533012 - f 74 -5.3 -4.9448 | gap 1, opp_overlap 1533012 1533014 1533024, overlap 1533007 1533024 ACGCAGCAAATAAAA TACT-AGTAC AAA GTACTCAGTA CTTTAAGTTAAAAAA TERM 1144 1533949 - 1533997 + G 79 -8.2 -4.14392 | opp_overlap 1533935 1533951 ACCATTACGGTTAAT GAGCTTGCATTACGTATGTCAG AAAAA CTTTCAGATGTAATGCAAGCCC TTTTAAAACTTGGAA infB 1533118 - 1535664 + | translation initiation factor IF-2 rbfA 1535695 - 1536057 + | ribosome-binding factor A TERM 1145 1538274 - 1538290 + TF 71 -2.3 -5.38951 | overlap 1538271 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT glnA 1540773 - 1539922 - | glutamine synthetase TERM 1146 1541267 - 1541277 + GH 78 -4 -5.41746 | ATACAAGAAAATAGC GATT ATC AATC TTTTTTTAAACCATT OTBS_1576 1540751 - 1541482 + | hypothetical protein ccmC 1541475 - 1542185 + | heme exporter protein C fdxA 1542191 - 1542511 + | ferredoxin dsbA 1542647 - 1543471 + | Thiol:disulfide interchange protein OTBS_1581 1543600 - 1544127 + | hypothetical protein rnhA 1544127 - 1544633 + | ribonuclease H OTBS_1583 1544605 - 1544967 + | check-maybe an arthopod gene OTBS_1584 1544972 - 1545457 + | putative ABC transporter substrate binding protein TERM 1147 1545506 - 1545487 - g 70 -7.2 -3.67792 | TTACAGCCAGTTAAA GGTAGCAA AGAT TTACTACC TGAAGAATTTGGAAA TERM 1148 1546254 - 1546264 + G 71 -5.4 -4.73448 | TGGGTTAGATTATTA CTGT CAT ACAG TTTTTGAGTATGTAT hisS 1545460 - 1546731 + | histidyl-tRNA synthetase nusB 1546743 - 1547231 + | transcription antitermination protein NusB gst 1548884 - 1548216 - | glutathione S-transferase TERM 1149 1549779 - 1549763 - H 71 -2.3 -5.46276 | overlap 1549770 AAGATATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAGGAAAAAA TERM 1150 1550320 - 1550303 - g 72 -2.7 -5.33848 | AGGATAATCAAAAAA TCAGTTC TGGA GAAATGA TTCAAACATTTTATA TERM 1151 1550436 - 1550423 - g 71 -3.1 -5.16237 | AACCTTATGAAAAAA GACAA AAAA TCGTC ATTGAAACTCAGCAA spoT34 1549975 - 1550535 + | spoT-like ppGpp hydrolase rhp4 1551182 - 1550613 - | hypothetical protein TERM 1152 1550895 - 1550907 + g 75 -4.9 -5.04868 | AGTAAAACTTACTTG TGTAT ATA ATACA TTTTGTTTGCTTTGG traD_Ti 1551677 - 1551279 - | conjugative transfer protein TERM 1153 1551415 - 1551437 + g 77 -7.8 -4.13767 | ATGTAGCGCTTAGTG TTTTCATCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 1154 1551663 - 1551689 + g 81 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA OTBS_1598 1553537 - 1553379 - | hypothetical protein TERM 1155 1553911 - 1553884 - R 76 -5 -5.07567 | gap 1, opp_overlap 1553903, overlap 1553890 1553903 TTACATCCGAAAAAA GCAAAATCTCATT CAA AATGAGA-TATGC AATTTATCTCTGTAT TERM 1156 1553906 - 1553890 - R 90 -8.1 -4.86862 | opp_overlap 1553903, overlap 1553884 1553903 CCGAAAAAAGCAAAA TCTCATT CAA AATGAGA TATGCAATTTATCTC rhp5 1554709 - 1553993 - | hypothetical protein TERM 1157 1554136 - 1554154 + g 71 -3.2 -5.18866 | GTCCTTGAGCCAATA GTAGTTGT TTG ATAATTAC TTTTCTTTGTTTCGA OTBS_1601 1554986 - 1555156 + | hypothetical protein dam23 1555184 - 1555990 + | site-specific DNA adenine methylase TERM 1158 1556151 - 1556137 - T 81 -3.6 -5.52023 | ATTATCAAGAAAAAA TAATGT TTA ACACTA TCCATAAGCAAAAAA ank2A8 1558448 - 1556280 - | ankyrin repeat-containing protein TERM 1159 1556743 - 1556762 + g 79 -7.2 -4.43173 | TTAGGAAGGCGATAT GTATTCGG AGAA CTGAATAC TTTTAGGTTATTTTT TERM 1160 1556852 - 1556875 + g 73 -8.3 -3.5275 | opp_overlap 1556849 1556856, overlap 1556856 TTAAAAAATCAATGT CAAATGGAA GTACTA TTCCATTTG TTAGTTCTATAATTT TERM 1161 1558593 - 1558565 - R 79 -7.6 -4.32607 | opp_overlap 1558567, overlap 1558567 GGAAAAGTGAACAAA CAGCTAACTTAA TAAAT TCAAGTTAGCTA TAATAACCAGAATTT TERM 1162 1558591 - 1558567 - R 74 -8 -3.75005 | opp_overlap 1558567, overlap 1558565 AAAAGTGAACAAACA GCTAACTTAA TAAAT TCAAGTTAGC TATAATAACCAGAAT TERM 1163 1559026 - 1559007 - R 82 -10.8 -2.8001 | ATAATCTCCAGTACA GCTTTGCT TAGC AGCAAAGC ATAGAACGATAAATA TERM 1164 1560387 - 1560406 + r 90 -10.8 -3.65581 | opp_overlap 1560373 ATGTAGCTGCAATTT TTTGCAGG TTCA CCTGCAAA TTCTTGCAAATTGAT TERM 1165 1560442 - 1560460 + r 87 -2.4 -6.20267 | AATTTTTTTGTTGTA GAAGGACA ATT TTTTCTTC TTTTTTTCTTTTTCA TERM 1166 1560470 - 1560490 + r 75 -4.8 -5.08011 | TTCTTCTTTTTTTCT TTTTCAGT AAAAC GCTGAAAA TTTTTTAGAAGTTTT TERM 1167 1560829 - 1560810 - R 86 -6.4 -5.4588 | opp_overlap 1560810 1560821 TAAAACGATAAAAAA CAGTTGCA TTAT TGCTACTG TTATTATTAGCAATT OTBS_1607 1564623 - 1563112 - | Mg chelatase-related protein TERM 1168 1565781 - 1565765 - R 71 -2.3 -5.38951 | overlap 1565772 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTBS_1611 1566149 - 1565766 - | hypothetical protein OTBS_1613 1569515 - 1568544 - | hypothetical protein ftsZ 1570959 - 1569598 - | cell division protein ftsZ TERM 1169 1570614 - 1570634 + g 76 -9.7 -3.14881 | opp_overlap 1570614 CAATTCTTGCAACTA CTGGAGCTG CGC CGGTTCCAG TTCCTCCGCCCATTC TERM 1170 1571036 - 1571061 + r 72 -2.7 -5.34555 | overlap 1571035 GTTGTTTATATTATT TTACATAGTAT GTAA GTACTATTTAA TTTTTTATACTATAA murA 1572430 - 1571165 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1171 1572210 - 1572186 - G 70 -4.3 -4.9218 | opp_overlap 1572189 1572191, overlap 1572189 CATGGAGGAGAAAAA TGACCGCTAAT GTT ATTAGCTGTTA ATGCAATAGTTCCAC TERM 1172 1572725 - 1572713 - H 70 -6.3 -4.10007 | opp_overlap 1572702, overlap 1572702 ATAAGCTTTTTAAAA GCTAT AGT ATAGC AAAGAATGATATGTT OTBS_1617 1573374 - 1574075 + | hypthetical protein TERM 1173 1575953 - 1575909 - f 100 -21.2 -5.1166 | gap 1, opp_overlap 1575909 CAGGAAAAGTAAAAA TTACAGCACGTTTCACAC-TA TACA TAGGTGTGAAACGTGCTGTAA TTTTTACTTTTTTAT TERM 1174 1575909 - 1575953 + F 100 -21.2 -5.27769 | gap 1, opp_overlap 1575909 CAGGAAAAGTAAAAA TTACAGCACGTTTCACAC-TA TACA TAGGTGTGAAACGTGCTGTAA TTTTTACTTTTTTAT OTBS_1619 1576020 - 1576214 + | hypothetical protein rbn 1577018 - 1576173 - | putative ribonuclease BN TERM 1175 1576506 - 1576496 - G 71 -5.4 -4.66987 | opp_overlap 1576496 TATATCTTAACAAAA TCCA TAT TGGA CTTAATGTTTTGGTA TERM 1176 1576906 - 1576896 - G 86 -4 -5.86332 | GGAAGCTAAAAAAAA CATT ACA AATG GAAAAATTGATAACA TERM 1177 1577668 - 1577684 + H 71 -2.3 -5.38951 | opp_overlap 1577668, overlap 1577665 TTTTTTCTTTGATAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTBS_1624 1578738 - 1578869 + | hypothetical protein OTBS_1626 1579874 - 1579644 - | hypothetical protein nuoA 1580080 - 1580451 + | NADH dehydrogenase subunit A nuoB 1580464 - 1580979 + | NADH dehydrogenase subunit B nuoC 1580990 - 1581577 + | NADH dehydrogenase I chain C nuoD 1581603 - 1582793 + | NADH dehydrogenase subunit D nuoE 1582790 - 1583368 + | NADH dehydrogenase I chain E nuoF 1583362 - 1584630 + | NADH dehydrogenase I subunit F OTBS_1633 1585747 - 1585034 - | hypothetical protein TERM 1178 1588329 - 1588344 + G 70 -6.2 -4.17556 | TGTATAGTATGGATT TTTGCT GTTA AGCAAA TTTATTCAGAATATA tlc 1586874 - 1588373 + | ADP/ATP carrier protein TERM 1179 1589535 - 1589488 - f 100 -18.8 -2.90571 | opp_overlap 1589491, overlap 1589491 AATTCTCTAAGGATA TTAGCAGCACATCATTTACATA TACA TATGTAAATGATGTGCTGCTTT CACTTAACTGTTAAT TERM 1180 1589532 - 1589491 - f 100 -24.9 -2.69964 | opp_overlap 1589491, overlap 1589488 TCTCTAAGGATATTA GCAGCACATCATTTACATA TACA TATGTAAATGATGTGCTGC TTTCACTTAACTGTT TERM 1181 1589491 - 1589532 + F 100 -24.9 -3.78067 | opp_overlap 1589491 1589488 TCTCTAAGGATATTA GCAGCACATCATTTACATA TACA TATGTAAATGATGTGCTGC TTTCACTTAACTGTT ruvC 1589521 - 1590036 + | Holliday junction resolvase duS 1590092 - 1591060 + | putative tRNA-dihydrouridine synthase OTBS_1640 1591427 - 1591089 - | hypothetical protein TERM 1182 1592259 - 1592243 - g 73 -8.1 -3.45088 | opp_overlap 1592243 TTAAAAGAAATTCAA GGATTAT CAT ATAATCC TATATTGCAGCAATG TERM 1183 1592243 - 1592259 + G 70 -8.1 -3.07013 | opp_overlap 1592243 TTAAAAGAAATTCAA GGATTAT CAT ATAATCC TATATTGCAGCAATG ubiG 1591589 - 1592329 + | ubiquinone biosynthesis O-methyltransferase truA 1594038 - 1593184 - | tRNA pseudouridine synthase A rplM 1594180 - 1594662 + | 50S ribosomal protein L13 rpsI 1594666 - 1595157 + | 30S ribosomal protein S9 TERM 1184 1595991 - 1596012 + G 100 -11.7 -3.98214 | CAATGGTATTGCTTT GGTCAGAAT CTTA ATTCTGACC TTTATGATACATACT OTBS_1646 1595487 - 1596233 + | hypothetical protein TERM 1185 1596414 - 1596433 + F 76 -8 -3.91897 | opp_overlap 1596416 1596427 TCTTGCACGGCATTA GATTAGAT AGAA ATCTAATC TTTATGGATCAGAAC TERM 1186 1599025 - 1599041 + F 71 -2.3 -5.38951 | overlap 1599022 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT TERM 1187 1599988 - 1600007 + F 86 -6.4 -5.4588 | opp_overlap 1599975 1599967 1599988, overlap 1599967 AATTGCTAATAATAA CAGTAGCA ATAA TGCAACTG TTTTTTATCGTTTTA TERM 1188 1600347 - 1600327 - f 100 -9.1 -5.08011 | AAAACTTCTAAAAAA TTTTCAGCG TTT CACTGAAAA AGAAACAAAAGGAGA TERM 1189 1600430 - 1600413 - f 85 -8.5 -4.46233 | opp_overlap 1600420 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA AAAGTTTCAGGTACA TERM 1190 1600833 - 1600819 - f 74 -8.6 -3.3375 | overlap 1600809 1600817 ACTAACACCAGAAGA TGCAGT TAT ACTGCA ATCAATATCTAGCAG TERM 1191 1601412 - 1601396 - f 71 -7.3 -3.80858 | opp_overlap 1601381 1601396 1601392 TCAGAACTTAGTAAA GAGCTAG GTT CTAACTC TATATTGTTCAAAGT TERM 1192 1602245 - 1602273 + F 79 -7.6 -4.32607 | opp_overlap 1602247, overlap 1602247 AAATTCTGGTTATTA TAGCTAACTTGA ATTTA TTAAGTTAGCTG TTTGTTCACTTTTCC TERM 1193 1602247 - 1602271 + F 74 -8 -3.75005 | opp_overlap 1602247, overlap 1602245 ATTCTGGTTATTATA GCTAACTTGA ATTTA TTAAGTTAGC TGTTTGTTCACTTTT TERM 1194 1603968 - 1603945 - g 73 -8.3 -3.5275 | opp_overlap 1603942 1603949, overlap 1603949 AAATTATAGAACTAA CAAATGGAA TAGTAC TTCCATTTG ACATTGATTTTTTAA TERM 1195 1604077 - 1604058 - g 79 -7.2 -4.43173 | AAAAATAACCTAAAA GTATTCAG TTCT CCGAATAC ATATCGCCTTCCTAA ank2A9 1602390 - 1604540 + | ankyrin repeat-containing protein TERM 1196 1604669 - 1604683 + T 81 -3.6 -5.52023 | TTTTTTGCTTATGGA TAGTGT TAA ACATTA TTTTTTCTTGATAAT dam25 1605636 - 1604830 - | site-specific DNA adenine methylase OTBS_1657 1606354 - 1606608 + | hypothetical protein TERM 1197 1607799 - 1607789 - g 71 -5.4 -4.68724 | opp_overlap 1607789 1607787 TTAGGGAATATAAAA GCTA AAT TAGC TGATTTTGACTTGGT hkp33 1606658 - 1607956 + | putative signal transduction histidine kinase TERM 1198 1608284 - 1608261 - g 71 -7.6 -3.42699 | gap 1, opp_overlap 1608260 ATGCATCCATTAGAA GTAG-CTGATA TGG TATCAGACTAC AGTTTTGAAACAGAT TERM 1199 1608566 - 1608553 - g 80 -5.3 -5.16237 | AACCTTATGAAAAAA GACAA AAAA TTGTC ATTGAAACTCAGCAA spoT35 1608090 - 1608665 + | spoT-like ppGpp hydrolase TERM 1200 1611160 - 1611109 - f 100 -12 -4.2231 | opp_overlap 1611111 1611113 1611115 1611118 1611125, overlap 1611110 1611113 AAGTATCAGTCAAAA GCTATACAAGAGATAATATACAGT TAGA ATTGTATATTATCTCTTGTATATA GTTTCAACTAATAAC TERM 1201 1611159 - 1611110 - f 100 -15.5 -3.12663 | opp_overlap 1611111 1611113 1611115 1611118 1611125, overlap 1611109 1611113 AGTATCAGTCAAAAG CTATACAAGAGATAATATACAGT TAGA ATTGTATATTATCTCTTGTATAT AGTTTCAACTAATAA TERM 1202 1611111 - 1611158 + F 100 -21.2 -2.93089 | opp_overlap 1611110 1611109 1611113, overlap 1611113 1611115 1611118 1611125 GTATCAGTCAAAAGC TATACAAGAGATAATATACAGT TAGA ATTGTATATTATCTCTTGTATA TAGTTTCAACTAATA TERM 1203 1611113 - 1611156 + F 100 -19.4 -3.01497 | opp_overlap 1611110 1611109 1611113, overlap 1611111 1611115 1611118 1611125 ATCAGTCAAAAGCTA TACAAGAGATAATATACAGT TAGA ATTGTATATTATCTCTTGTA TATAGTTTCAACTAA TERM 1204 1611156 - 1611113 - f 100 -17.2 -2.76671 | opp_overlap 1611113 1611111 1611115 1611118 1611125, overlap 1611110 1611109 ATCAGTCAAAAGCTA TACAAGAGATAATATACAGT TAGA ATTGTATATTATCTCTTGTA TATAGTTTCAACTAA TERM 1205 1611115 - 1611154 + F 100 -17.6 -3.06037 | opp_overlap 1611113 1611110 1611109, overlap 1611113 1611111 1611118 1611125 CAGTCAAAAGCTATA CAAGAGATAATATACAGT TAGA ATTGTATATTATCTCTTG TATATAGTTTCAACT TERM 1206 1611118 - 1611151 + F 100 -13.5 -3.66787 | opp_overlap 1611113 1611110 1611109, overlap 1611115 1611113 1611111 1611125 TCAAAAGCTATACAA GAGATAATATACAGT TAGA ATTGTATATTATCTC TTGTATATAGTTTCA TERM 1207 1611394 - 1611372 - f 90 -6.4 -5.57729 | overlap 1611374 1611384 1611385 AAAGAAGACAAAAAA TCCTTATTGA AAC TCAACAAGAA TTTATACCTCTTGCT xth1 1611638 - 1612423 + | exodeoxyribonuclease III traD_Ti 1612863 - 1612465 - | conjugative transfer protein TERM 1208 1612601 - 1612623 + g 77 -7.8 -4.13767 | ATGTGGTGCTTAGTG TTTTCGTCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 1209 1612849 - 1612875 + g 81 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA TERM 1210 1618729 - 1618754 + r 71 -4.7 -4.77925 | overlap 1618730 TCTTTACTAATGGCA AGCCTCTAAAA CAGA TTTTTGAGGCC TTTTTAGCGTTTTTT TERM 1211 1618730 - 1618753 + r 73 -8.2 -3.44315 | overlap 1618729 CTTTACTAATGGCAA GCCTCTAAAA CAGA TTTTTGAGGC CTTTTTAGCGTTTTT tpr1B16 1620257 - 1619283 - | TPR repeat-containing protein trbC 1622556 - 1622236 - | conjugative transfer protein traV 1623803 - 1623513 - | conjugative transfer protein tchB 1624780 - 1624379 - | hypothetical protein traE 1625328 - 1624777 - | conjugative transfer protein tchA 1625663 - 1625328 - | hypothetical protein int 1626532 - 1625789 - | phage-related integrase ank1B3 1628200 - 1629372 + | ankyrin repeat-containing protein TERM 1212 1629529 - 1629498 - f 70 -8.2 -3.21099 | opp_overlap 1629498 TGCTTGCACTATTAA GGTTTTGAATTGCA TAAA TAAAATTCAAAACC TTACCTCTACAACAT TERM 1213 1630201 - 1630216 + F 77 -7.6 -4.1721 | opp_overlap 1630213 TTATTGGAATATTGA GCTCTT TAGC AAGAGC TTTTAAGCTCTGAGT TERM 1214 1631607 - 1631623 + F 70 -5.9 -4.30014 | overlap 1631608 CTCTTCTTCATTGAT TTGTTTC TGT GAAACAG TTTTGAGTTGCTCAA TERM 1215 1632250 - 1632276 + F 74 -5.4 -4.96523 | opp_overlap 1632250 1632262, overlap 1632263 GAAGTCCGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 1216 1632330 - 1632344 + F 89 -3.6 -6.06529 | CTCACCTTCAGTAGA TCTAGA TAT TTTAGA TTTTTTTTATATATC TERM 1217 1632372 - 1632407 + F 87 -11.4 -3.02043 | opp_overlap 1632380 1632381, overlap 1632381 ATCTATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGGACGAAATT TERM 1218 1632399 - 1632380 - f 74 -5 -5.00884 | opp_overlap 1632372 1632381, overlap 1632381 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGG TERM 1219 1632381 - 1632398 + F 85 -8.5 -4.56883 | opp_overlap 1632380 1632381, overlap 1632372 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 1220 1632398 - 1632381 - f 74 -8.5 -3.60048 | opp_overlap 1632381 1632372, overlap 1632380 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 1221 1632470 - 1632488 + F 71 -4.6 -4.82901 | overlap 1632472 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGAA OTBS_1682 1633156 - 1634943 + | hypothetical protein TERM 1222 1635371 - 1635381 + G 95 -5.4 -5.97575 | CCAAATTATAGCGTA TCTG GTG CAGA TTTTTTTTCTGAGTT OTBS_1683 1635074 - 1636264 + | HK97 family phage portal protein OTBS_1684 1636283 - 1636549 + | hypothetical protein OTBS_1685 1637209 - 1636970 - | putative transcriptional regulator TERM 1223 1637430 - 1637448 + G 82 -2.5 -5.93809 | overlap 1637426 ATATTTATGCATCAC TTAGTAA GTGCA TTACTGA TTTTTTTTATAACAG TERM 1224 1637529 - 1637511 - g 74 -7.5 -3.786 | opp_overlap 1637511 1637513 CCAGAAAAGTGTAAA TATCCTC AGGCA GAGGATA TATATGAAGAAGATG TERM 1225 1638048 - 1638028 - g 78 -9.1 -3.41989 | overlap 1638023 AGTTACAAAACTTAA TGTCTTTGC AAA ACAAAGACA GCAACTCAGTACTAA rhp8 1637388 - 1638968 + | ompA-like, putative autotransporter TERM 1226 1639580 - 1639592 + F 70 -5.5 -4.26589 | overlap 1639581 AATTGAGTAATTTTT TTGCC TAT GGCAG TTTTAAATATCTGCT ank2A10 1640706 - 1641392 + | ankyrin repeat-containing protein TERM 1227 1641444 - 1641424 - f 100 -9.1 -4.55128 | opp_overlap 1641423 ATTTCTAAAGTAAAA TGAAGAGAA GAT TTCTCTCCA CATTTCAAATGAAGA TERM 1228 1642397 - 1642383 - g 84 -3.6 -5.78622 | CTATGTTAAAAAAAA TCTAAC CGA ATTAGA AAGGCAACTATATTC OTBS_1690 1641865 - 1642935 + | hypothetical protein OTBS_1691 1643252 - 1643028 - | hypothetical protein TERM 1229 1645399 - 1645415 + r 71 -2.3 -5.38951 | overlap 1645396 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT TERM 1230 1648298 - 1648353 + r 100 -12.2 -3.11173 | opp_overlap 1648306, overlap 1648304 1648306 1648311 TAGATTTTGTAAATT TTTGAAAATCGCAGTAGCAGAATGAG AAAT CTCATTCTGCTACTATAATGTTTAAA TTAGCTAAATTATCT TERM 1231 1648304 - 1648347 + r 80 -9 -3.76952 | opp_overlap 1648306, overlap 1648298 1648306 1648311 TTGTAAATTTTTGAA AATCGCAGTAGCAGAATGAG AAAT CTCATTCTGCTACTATAATG TTTAAATTAGCTAAA TERM 1232 1648306 - 1648345 + r 93 -11.6 -3.46783 | opp_overlap 1648306, overlap 1648304 1648298 1648311 GTAAATTTTTGAAAA TCGCAGTAGCAGAATGAG AAAT CTCATTCTGCTACTATAA TGTTTAAATTAGCTA TERM 1233 1648345 - 1648306 - R 100 -13.8 -4.12942 | opp_overlap 1648306 1648304 1648298 1648311 GTAAATTTTTGAAAA TCGCAGTAGCAGAATGAG AAAT CTCATTCTGCTACTATAA TGTTTAAATTAGCTA TERM 1234 1648311 - 1648340 + r 100 -18.1 -2.98137 | opp_overlap 1648306, overlap 1648306 1648304 1648298 TTTTTGAAAATCGCA GTAGCAGAATGAG AAAT CTCATTCTGCTAC TATAATGTTTAAATT int 1649703 - 1648459 - | phage-related integrase TERM 1235 1649751 - 1649693 - G 100 -21.1 -3.14468 | opp_overlap 1649694 1649697 1649700, overlap 1649697 1649700 TTTGATGATATTGAA GTCATAATCACCCCACATAATAATAT-TA ATG TATATATTATTATGTGGGGTGATTATGA- CTTCAATATCATCAA TERM 1236 1649694 - 1649752 + g 100 -21.1 -3.14468 | gap 2, opp_overlap 1649693 1649697 1649700, overlap 1649697 1649700 TTGATGATATTGAAG -TCATAATCACCCCACATAATAATAT-TA ATG TATATATTATTATGTGGGGTGATTATGAC TTCAATATCATCAAA TERM 1237 1649697 - 1649748 + g 100 -23 -2.56273 | gap 1, opp_overlap 1649693 1649697 1649700, overlap 1649694 1649700 ATGATATTGAAGTCA TAATCACCCCACATAATAATAT-TA ATG TATATATTATTATGTGGGGTGATTA TGACTTCAATATCAT TERM 1238 1649748 - 1649697 - G 100 -23 -2.56273 | gap 1, opp_overlap 1649697 1649694 1649700, overlap 1649693 1649700 ATGATATTGAAGTCA TAATCACCCCACATAATAATAT-TA ATG TATATATTATTATGTGGGGTGATTA TGACTTCAATATCAT TERM 1239 1649700 - 1649745 + g 100 -20.3 -3.43117 | gap 1, opp_overlap 1649697 1649693 1649700, overlap 1649697 1649694 ATATTGAAGTCATAA TCACCCCACATAATAATAT-TA ATG TATATATTATTATGTGGGGTGA TTATGACTTCAATAT TERM 1240 1649745 - 1649700 - G 100 -20.3 -3.43117 | gap 1, opp_overlap 1649700 1649697 1649694, overlap 1649697 1649693 ATATTGAAGTCATAA TCACCCCACATAATAATAT-TA ATG TATATATTATTATGTGGGGTGA TTATGACTTCAATAT TERM 1241 1650149 - 1650133 - H 71 -2.3 -5.45652 | ATTTTTAATAAAAAA CCTTAAA TAT TTCAAAG CTTTATAAGTTTTAG sdhC 1650326 - 1650676 + | succinate dehydrogenase, cytochrome b556 subunit sdhD 1650707 - 1651096 + | succinate dehydrogenase hydrophobic membrane anchor protein sdhA 1651291 - 1653078 + | succinate dehydrogenase flavoprotein subunit sdhB 1653107 - 1653898 + | succinate dehydrogenase iron-sulfur subunit lepB 1655797 - 1656537 + | signal peptidase I rnc 1656578 - 1657333 + | ribonuclease III TERM 1242 1657529 - 1657565 + T 77 -4.7 -5.30199 | opp_overlap 1657532 1657537 1657541, overlap 1657530 1657531 AGGTTGGTTTCAAGT ATATTTAACTAATTTTA ACA TAAAATTAGTTAAAGGA TTTTTCTTGCTTTTT TERM 1243 1657530 - 1657564 + T 77 -8.2 -3.74459 | opp_overlap 1657532 1657537 1657541, overlap 1657529 1657531 GGTTGGTTTCAAGTA TATTTAACTAATTTTA ACA TAAAATTAGTTAAAGG ATTTTTCTTGCTTTT TERM 1244 1657531 - 1657563 + T 74 -9.5 -2.82235 | opp_overlap 1657532 1657537 1657541, overlap 1657530 1657529 GTTGGTTTCAAGTAT ATTTAACTAATTTTA ACA TAAAATTAGTTAAAG GATTTTTCTTGCTTT TERM 1245 1657562 - 1657532 - T 100 -13 -2.90075 | opp_overlap 1657531 1657530 1657529, overlap 1657537 1657541 TTGGTTTCAAGTATA TTTAACTAATTTTA ACA TAAAATTAGTTAAA GGATTTTTCTTGCTT TERM 1246 1657557 - 1657537 - T 70 -8.5 -3.16267 | opp_overlap 1657531 1657530 1657529, overlap 1657532 1657541 TTCAAGTATATTTAA CTAATTTTA ACA TAAAATTAG TTAAAGGATTTTTCT TERM 1247 1657592 - 1657608 + T 71 -2.3 -5.38951 | overlap 1657589 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT aas 1662526 - 1659053 - | acylglycerophosphoethanolamine acyltransferase TERM 1248 1659809 - 1659798 - G 74 -3 -5.38549 | CTTAAAGAATAAAAA TCAT ATGG ATGA GCATACTTAGCATAA OTBS_1707 1663507 - 1662845 - | esterase TERM 1249 1663179 - 1663155 - GR 72 -5.1 -4.82901 | opp_overlap 1663159 GCTCCTTGAGAAAAA CCAATTAAGAT AGT ATCTTGATTAG TAAGTCCAAGCTGCT nth 1664112 - 1663474 - | endonuclease III grlA 1664167 - 1664541 + | glutaredoxin-related protein OTBS_1710 1664602 - 1665150 + | hypothetical protein TERM 1250 1665213 - 1665199 - f 85 -3.6 -5.69023 | AAAACATCAAAAAAA TCCATT TTT AATAGA AACACAAATTAGAAT TERM 1251 1665445 - 1665387 - f 82 -10.8 -2.66272 | gap 1, opp_overlap 1665399 1665402, overlap 1665399 TGCGATGCAAAGTTA TGTATAGCTAAACCACTATAAAACAGT TATGAT ATTGTTTTATAGTAGTTTGGCTA-ACA AAACACAGATGGAAT TERM 1252 1665434 - 1665399 - f 71 -7.1 -3.71873 | opp_overlap 1665399 1665402, overlap 1665387 TTATGTATAGCTAAA CCACTATAAAACAGT TATGAT ATTGTTTTATAGTAG TTTGGCTAACAAAAC TERM 1253 1665696 - 1665750 + F 72 -8.3 -3.22774 | gap 1, opp_overlap 1665699, overlap 1665699 GATCTTTGGCATTTA TAATTTTGAACTACCTTA-ACCAGTT TCGA AAGAGGTCTAATGTAGTTCAAAATTA TTGCTGATAAATATC TERM 1254 1666016 - 1666047 + F 74 -9 -3.29511 | opp_overlap 1666032 AACGTTTGGATTTTT CATTATCCTAAA CTAATCCT TTTAGGATAATG TTATGAAAACATAAG OTBS_1712 1666183 - 1666344 + | hypothetical protein OTBS_1714 1667214 - 1666414 - | hypothetical protein p34 1667484 - 1668401 + | p34 protein/ cation transporter codA 1668457 - 1668924 + | cytosine deaminase TERM 1255 1670058 - 1670041 - g 77 -7.7 -4.09243 | opp_overlap 1670048 TACAGGTTGGCAAAA CAGGAGC TGTT ACTCCTG TAGCATTGCTTATTC ligA 1669002 - 1671098 + | NAD-dependent DNA ligase LigA OTBS_1718 1671105 - 1672877 + | aminopeptidase OTBS_1720 1673670 - 1673512 - | hypothetical protein TERM 1256 1675293 - 1675282 - g 70 -4.4 -4.90321 | overlap 1675283 1675285 AAAAAGAATATAAAA CTAC TAGC GTAG CAAGAATACTTAATT hkp35 1674930 - 1675877 + | putative signal transduction histidine kinase int 1676815 - 1678059 + | phage-related integrase tchA 1678185 - 1678520 + | hypothetical protein traE 1678520 - 1679071 + | conjugative transfer protein tchB 1679068 - 1679469 + | hypothetical protein traB 1679581 - 1680045 + | conjugative pilus assembly protein traV 1680045 - 1680335 + | conjugative transfer protein trbC 1681292 - 1681612 + | conjugative transfer protein traD_F 1685432 - 1686577 + | conjugative transfer protein tnE 1687490 - 1686579 - | transposase and inactivated derivative TERM 1257 1687142 - 1687168 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTATAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT TERM 1258 1687276 - 1687287 + g 70 -4.4 -4.86621 | opp_overlap 1687271 1687276 AATATATAAATAAAA GCAT TGCC ATGC TTTTTGGTTGCAACT TERM 1259 1687287 - 1687276 - G 73 -4.4 -5.08878 | opp_overlap 1687276, overlap 1687271 AATATATAAATAAAA GCAT TGCC ATGC TTTTTGGTTGCAACT TERM 1260 1687304 - 1687322 + g 72 -2.5 -5.43866 | gap 1 TTTTGGTTGCAACTT TATAGACG ATAT CG-CTATA TTTTTTTAACGATTC TERM 1261 1689502 - 1689522 + H 100 -11.2 -4.2803 | TATTTTTATTACCCT TGAGCTGC TCTAT GCAGCTCA TTTTACCTTCGAATA TERM 1262 1692359 - 1692331 - g 91 -5.3 -5.7946 | TCTCCAACAAAAAAA GGCTAAGCTAATC ATG GATGAGGTTAACC TTAAAATTAAAGAAC TERM 1263 1692606 - 1692584 - g 77 -7.8 -4.13767 | GCCGTGATTTTAAAA TTTTCCTCTG AAC CAGACGAAAA CACTAAGCTCCACAT traD_Ti 1692287 - 1692742 + | conjugative transfer protein rhp4 1692837 - 1693385 + | hypothetical protein OTBS_1744 1694350 - 1693466 - | hypothetical protein spoT39 1695059 - 1694484 - | spoT-like ppGpp hydrolase TERM 1264 1694547 - 1694575 + g 73 -7.5 -3.68908 | opp_overlap 1694547, overlap 1694548 TCGTAATTTAAGGTA TTCAGCAAGAGGT ATA AATTCTTGCTGAG TTTCAATGAGTATTT TERM 1265 1694548 - 1694574 + g 71 -8.8 -2.80622 | opp_overlap 1694547, overlap 1694547 CGTAATTTAAGGTAT TCAGCAAGAGGT ATA AATTCTTGCTGA GTTTCAATGAGTATT TERM 1266 1694699 - 1694716 + g 72 -2.7 -5.33848 | TATAAAATGTTTGAA TCATTTC TCCA GAACTGA TTTTTTGATTATCCT hkp37 1696761 - 1695160 - | putative signal transduction histidine kinase TERM 1267 1695317 - 1695327 + g 71 -5.4 -4.68724 | opp_overlap 1695315 1695317 ACCAAGTCAAAATCA GCTA ATT TAGC TTTTATATTCCCTAA OTBS_1749 1697925 - 1699793 + | hypothetical protein rhp5 1700213 - 1700037 - | hypothetical protein TERM 1268 1700571 - 1700590 + r 71 -2.2 -5.38348 | opp_overlap 1700565 1700584, overlap 1700565 1700582 1700584 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT TERM 1269 1700717 - 1700741 + r 71 -6.6 -3.95584 | AGCTTTAAGGCTTAT TTTCTACTAT AATTC ATAGTAGAGA TTTAATTAATCAAAA rhp6 1702082 - 1701579 - | putative ompA-like autotransporter ank1C12 1702827 - 1702183 - | ankyrin repeat-containing protein TERM 1270 1702929 - 1702955 + r 71 -8.8 -2.80876 | opp_overlap 1702928, overlap 1702928 GGTAGTTTAAGGTAT TCAGCAAGAGAT ATA AATTCTTGCTGA GTTTCAAATATTATT ank1u8 1705512 - 1703557 - | ankyrin repeat-containing protein TERM 1271 1705523 - 1705540 + r 85 -2.1 -6.02919 | TTCATTTGTATAATG TATTAAG TGAT TTTAATA TTTTTTTGTTTATAA OTBS_1757 1706356 - 1706000 - | hypothetical protein TERM 1272 1706221 - 1706240 + g 70 -4.4 -4.78029 | gap 1, opp_overlap 1706215 CTAGTAATATCATTA CATCTTGTC TCT GA-AAGATG TTTTGATTTTCTTGC TERM 1273 1707582 - 1707598 + H 81 -8.1 -4.09321 | opp_overlap 1707581 1707582 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCTTTAATTGAGTC yajC 1708150 - 1708530 + | preprotein translocase subunit YajC TERM 1274 1708590 - 1708603 + G 75 -2.4 -5.55664 | GCTATAGCACTTTGC TTCG TAGTAC CGAA TTTTTTTGATACTAC TERM 1275 1709660 - 1709672 + G 80 -6.3 -4.76088 | CATTTTAGGATTATT TGCTA ATA TAGCA TTATTTTTTAGTTTG secD 1708527 - 1710089 + | preprotein translocase subunit SecD TERM 1276 1711089 - 1711105 + T 71 -2.3 -5.38951 | overlap 1711086 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT aatA 1713887 - 1712685 - | aspartate aminotransferase A tpr1B17 1713996 - 1715033 + | TPR repeat-containing protein vacJ 1715093 - 1715926 + | VacJ-like lipoprotein OTBS_1769 1715923 - 1716513 + | hypothetical protein TERM 1277 1717470 - 1717450 - f 78 -6.9 -4.63542 | overlap 1717452 TATAATCCTCAAAAA TGGCTGAAT GCT ATTCAGCTA GCTAGTGGTAATGGC TERM 1278 1717468 - 1717452 - f 73 -9.5 -2.61718 | overlap 1717450 TAATCCTCAAAAATG GCTGAAT GCT ATTCAGC TAGCTAGTGGTAATG OTBS_1771 1717783 - 1718295 + | hypothetical protein TERM 1279 1718920 - 1718950 + G 72 -9.2 -2.72632 | opp_overlap 1718920 1718921, overlap 1718919 1718917 TTATTATTACCTAAA TTTTTGGTTCATAA TAA TTGTGAACCAGAAG ATATTTATGAAATTC recO 1718353 - 1719078 + | DNA repair protein RecO TERM 1280 1720066 - 1720050 - T 71 -2.3 -5.38951 | overlap 1720057 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA traW 1721980 - 1721828 - | conjugative transfer protein OTBS_1780 1722374 - 1722051 - | hypothetical protein radC 1723093 - 1722413 - | DNA repair protein TERM 1281 1723182 - 1723144 - H 100 -16.4 -3.65902 | opp_overlap 1723140 1723139 1723152 TCCATTGTATGGAAA TTTACATAGTGATCAATA ACT TAGTGATCACTATGTAAA TAAAATTCTTTTAAA rpsL 1723345 - 1723716 + | 30S ribosomal protein S12 rpsG 1723740 - 1724261 + | 30S ribosomal protein S7 TERM 1282 1724391 - 1724417 + G 71 -8.8 -2.87132 | opp_overlap 1724391 TATAGCATAGGAGAA GTTCATGATGGT ACT ACTGTCATGGAC TATATGAAGCAAGAA TERM 1283 1725254 - 1725284 + G 93 -9.9 -4.2008 | opp_overlap 1725260, overlap 1725251 ATTAGCTTTTAAGGT CATTAATGATCCT TTTGT AGGATCATTAACG TTTATTCGAATATAT TERM 1284 1725604 - 1725576 - g 74 -6.1 -4.39002 | opp_overlap 1725602 GATCAAGAAAAAATA TCAGCTGCT TTAGTAAAATT AGCAGCTGA AGATCCTTCATTAGT TERM 1285 1725826 - 1725800 - g 73 -4.5 -5.07275 | TTACACACATAAAAA GCAAACTGG AGGCGCTGG CCAATTTGC ACGTGTCAAGATTAT fusA 1724265 - 1726385 + | elongation factor EF-G rpsA 1726594 - 1728117 + | 30S ribosomal protein S1 TERM 1286 1728256 - 1728272 + T 71 -2.3 -5.38951 | overlap 1728253 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT tnB 1730392 - 1729526 - | transposase and inactivated derivative cspA 1731459 - 1731238 - | cold shock-like protein TERM 1287 1732316 - 1732354 + H 77 -9.9 -2.9547 | opp_overlap 1732318 1732324, overlap 1732309 1732318 CTATTATTTGTGATA TAGCTAAACTATTATAA CTGTT TTATAGTAGCTTAGCTA TATATGCCTATCTTT gcvT 1733207 - 1734073 + | gcvT-like aminomethyltransferase TERM 1288 1735194 - 1735177 - f 77 -7.1 -4.20696 | GTAGCAATTTTAAAA TGCATTA AGAA TAATGCA GGCAATTATTGTGGA pkcI 1736861 - 1737232 + | protein kinase C inhibitor 1 asd 1737280 - 1738329 + | aspartate-semialdehyde dehydrogenase cyoB 1739399 - 1738458 - | protoheme IX farnesyltransferase TERM 1289 1738653 - 1738636 - G 72 -7.1 -3.8766 | GTAGAGCATATTAAA TATAGCA AGCC TGCTATA TCAGTAAAGTATGGT TERM 1290 1738711 - 1738696 - G 79 -4.8 -5.17054 | opp_overlap 1738696 1738694 ATAACAGTTAAAAAA GTATAT GCTA ATATAC TGTATTTGGTATAAT coxA 1740997 - 1739411 - | cytochrome c oxidase polypeptide I TERM 1291 1739807 - 1739792 - G 71 -5.4 -4.72497 | overlap 1739794 GATCCAGTAATAAAA TCCAGC AAAT GCTGAA AACAATGCTCCCAAG TERM 1292 1739960 - 1739939 - G 79 -7.3 -4.53119 | opp_overlap 1739938 AAATAATATAATAAA TCCTATGCT AAAT AGCATTGGA GTCTTAAATTCAATT TERM 1293 1740181 - 1740153 - G 74 -9.7 -2.78463 | opp_overlap 1740161 1740173, overlap 1740159 1740161 ATTGCTCCTACCATA CCTAAATAGCCAA ATA TTGGCTTTTTAGA AAAAGTTGATATAAC TERM 1294 1740161 - 1740173 + g 82 -7.7 -4.57341 | opp_overlap 1740159 1740153 1740161 TACCATACCTAAATA GCCAA ATA TTGGC TTTTTAGAAAAAGTT TERM 1295 1740173 - 1740161 - G 71 -7.7 -3.44487 | opp_overlap 1740161, overlap 1740159 1740153 TACCATACCTAAATA GCCAA ATA TTGGC TTTTTAGAAAAAGTT TERM 1296 1740438 - 1740419 - G 70 -6.5 -4.16814 | overlap 1740434 1740435 TGACCATACAAACAA TGGGATT TGTAAT AATCCCA TGCCTGGGGCTCTCA OTBS_1801 1742610 - 1741189 - | hypothetical protein TERM 1297 1741792 - 1741808 + g 71 -6.7 -4.09459 | overlap 1741795 AAAGTTGTATGTTCC TAATTCA TTT TGAATTA TTTGTAAATTTTTAA TERM 1298 1741902 - 1741919 + g 70 -6.3 -4.323 | CATATCTATATTCTT TATCAGC TATA GCTGGTA TTTTAAGTATTTCCC TERM 1299 1743054 - 1743044 - g 74 -3.2 -5.47431 | GTAATATATAAAAAA GGAA TTA CTCC AATCCATGTTTGTAC rplY 1742936 - 1743559 + | 50S ribosomal protein L25/general stress protein Ctc pth 1743559 - 1744119 + | peptidyl-tRNA hydrolase ychF 1744129 - 1745229 + | putative GTP-binding protein OTBS_1805 1745438 - 1745277 - | hypothetical protein TERM 1300 1745870 - 1745832 - H 76 -9.9 -2.8304 | opp_overlap 1745832, overlap 1745829 1745824 1745834 TAAATAATCTAAGTA TAGCTAAACTGCTATAA AACAG TTATAATAGTTTAGCTA TTACTATGACTTAGA TERM 1301 1745832 - 1745870 + H 80 -9.9 -3.29739 | opp_overlap 1745832 1745829 1745824 1745834 TAAATAATCTAAGTA TAGCTAAACTGCTATAA AACAG TTATAATAGTTTAGCTA TTACTATGACTTAGA xth1 1746339 - 1747160 + | exodeoxyribonuclease III TERM 1302 1748248 - 1748225 - g 76 -5.3 -4.93365 | opp_overlap 1748225 1748246 GTGTATAAGCAAAAA CACAAGCTA TAGTTC TTGCTTGTG TTTAGCAAAAATTGA rhp6 1748208 - 1748513 + | putative ompA-like autotransporter OTBS_1815 1751309 - 1750797 - | hypothetical protein TERM 1303 1751051 - 1751069 + g 74 -3.8 -5.18409 | TGCCGTTAATACTAT CTATCTGA TTA TCGGAAAG TTTGTTTTTCTTTTG TERM 1304 1751325 - 1751348 + r 77 -9.8 -3.00986 | overlap 1751321 1751327 AAATAATCACCTTAT TATTATAAGC ATAA GCTTATAATA TGATTTACTGTAATT cycC 1752683 - 1752135 - | cytochrome c TERM 1305 1752210 - 1752228 + g 75 -8.2 -3.60638 | opp_overlap 1752210 1752208 1752203, overlap 1752208 1752199 TAATCCAATAAACGA CATTCTAG TAC CTGGAATG TATTTAGTTGGTTTA hflC 1752932 - 1753882 + | putative membrane protease, stomatin/prohibitin-like protein TERM 1306 1754870 - 1754886 + T 70 -5.9 -4.30014 | overlap 1754871 CTCTTCTTCATTGAT TTGTTTC TGT GAAACAG TTTTGAGTTGCTCAA TERM 1307 1755513 - 1755539 + T 74 -5.4 -4.96523 | opp_overlap 1755513 1755525, overlap 1755526 GAAGTCCGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 1308 1755593 - 1755607 + T 89 -3.6 -6.06529 | CTCACCTTCAGTAGA TCTAGA TAT TTTAGA TTTTTTTTATATATC TERM 1309 1755635 - 1755670 + T 87 -11.4 -3.02043 | opp_overlap 1755643 1755644, overlap 1755644 ATCTATATATGTCCC TGAAAAAAGTTTCAGG TTGA CCTGAAATTTCTTTCA TGTTGGGACGAAATT TERM 1310 1755662 - 1755643 - T 74 -5 -5.00884 | opp_overlap 1755635 1755644, overlap 1755644 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCATGTTGGG TERM 1311 1755661 - 1755644 - T 74 -8.5 -3.60048 | opp_overlap 1755635 1755644, overlap 1755643 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 1312 1755644 - 1755661 + T 85 -8.5 -4.56883 | opp_overlap 1755644 1755643, overlap 1755635 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCATGTTGG TERM 1313 1755733 - 1755751 + T 71 -4.6 -4.82901 | overlap 1755735 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGAA TERM 1314 1756564 - 1756547 - T 85 -2.7 -5.89921 | AGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTCAAACATTTTATA ank1C13 1758833 - 1758699 - | ankyrin repeat-containing protein trpS 1759976 - 1758969 - | tryptophanyl-tRNA synthetase TERM 1315 1763215 - 1763226 + r 71 -3 -5.31877 | ATAAATTATGCTTTT TTTG ATAT CAAA TTTTTTATACTAAAT rhp7 1763458 - 1763312 - | hypothetical protein OTBS_1832 1763815 - 1763576 - | hypothetical protein mrp 1767616 - 1766603 - | ATP-binding protein hflK 1767800 - 1768849 + | putative membrane bound protease protein hflC 1768873 - 1769739 + | putative membrane protease, stomatin/prohibitin-like protein htrA 1769757 - 1771157 + | periplasmic serine protease TERM 1316 1771191 - 1771164 - Tf 74 -8.6 -3.35072 | opp_overlap 1771162 1771170, overlap 1771155 1771170 AATAAGTAAATCTAA TTTAAAGGCGAT TTTA ATTGCCTTTAAA TATCAATTGTTAATT OTBS_1838 1771390 - 1771211 - | hypothetical protein TERM 1317 1771316 - 1771336 + gF 70 -5.5 -4.35581 | opp_overlap 1771312, overlap 1771315 TAAGTGTAAGATAGT TGTAGTACT ACA ATTACTACA TTTTAAATATTTTGA pal 1771365 - 1771973 + | peptidoglycan-associated lipoprotein precursor TERM 1318 1772013 - 1771984 - TR 95 -11.7 -3.49135 | opp_overlap 1771984 1771987 1771990 1771990, overlap 1771987 1771990 CATAGAAGTAACTAA GAATAATCTTCTC ACAG AAGAAGATTATTC TTCTTGAAGAGATAT TERM 1319 1771984 - 1772013 + Tr 90 -11 -3.62224 | opp_overlap 1771984 1771987 1771990, overlap 1771987 1771990 1771990 CATAGAAGTAACTAA GAATAATCTTCT CACAGA AGAAGATTATTC TTCTTGAAGAGATAT TERM 1320 1771987 - 1772010 + Tr 71 -6.9 -3.9461 | opp_overlap 1771984 1771987 1771990, overlap 1771984 1771990 1771990 AGAAGTAACTAAGAA TAATCTTCT CACAGA AGAAGATTA TTCTTCTTGAAGAGA TERM 1321 1772010 - 1771987 - TR 74 -7.6 -3.86634 | opp_overlap 1771987 1771984 1771990 1771990, overlap 1771984 1771990 AGAAGTAACTAAGAA TAATCTTCTC ACAG AAGAAGATTA TTCTTCTTGAAGAGA TERM 1322 1772004 - 1771990 - TR 75 -7.2 -4.04023 | opp_overlap 1771990 1771987 1771984 1771990, overlap 1771987 1771984 AGTAACTAAGAATAA TCTTCT CAC AGAAGA AGATTATTCTTCTTG TERM 1323 1772144 - 1772173 + Tr 100 -9.5 -5.32699 | opp_overlap 1772149, overlap 1772138 1772146 ATATTTTATTAACTC CAGAAGTTATAGT ATTT ACTATAACTTCTA TTTTTTAGTATTTAA TERM 1324 1772146 - 1772171 + Tr 100 -12.1 -4.27753 | opp_overlap 1772149, overlap 1772138 1772144 ATTTTATTAACTCCA GAAGTTATAGT ATTT ACTATAACTTC TATTTTTTAGTATTT TERM 1325 1772251 - 1772289 + Tr 83 -9 -4.12474 | ATTCTTTTGATGTTT TTGTAGCAGTACTGACTA TAT TAGTGGTTACTGCTGCAA TTATTATTATTAATT OTBS_1840 1775020 - 1772228 - | hypothetical protein TERM 1326 1772688 - 1772718 + g 82 -6.4 -5.09762 | opp_overlap 1772688 GCTGATAGCTGTAAA TTAGTTTTGTGA TTACGTT TCATAAAACTAA TTTTATTTATTGCGC TERM 1327 1773061 - 1773036 - G 80 -10.7 -2.78463 | opp_overlap 1773042, overlap 1773042 ATGTTTTCTACCATA TTAGAATATTG TTGC CAATATTCTAA ACTAGCTTTAATTGC TERM 1328 1773112 - 1773096 - G 75 -9.5 -2.88366 | opp_overlap 1773096 1773095 1773093, overlap 1773095 CTTTGAATTAAGAAG TCTACTG CTC CAGTAGA GTATTTAGGGTATTG TERM 1329 1773096 - 1773112 + g 74 -9.5 -2.64299 | opp_overlap 1773095 1773096, overlap 1773095 1773093 CTTTGAATTAAGAAG TCTACTG CTC CAGTAGA GTATTTAGGGTATTG trxB2 1775219 - 1776235 + | thioredoxin reductase TERM 1330 1776859 - 1776836 - gT 73 -8.2 -3.46602 | opp_overlap 1776838 CCTTGCATACTAGAA CAGCTGATAT TGTA ATTTCAGCTG TTGGAAAAGCGAATT OTBS_1843 1778457 - 1777072 - | hypothetical protein folD 1776232 - 1777137 + | methylenetetrahydrofolate dehydrogenase topA 1780823 - 1778457 - | DNA topoisomerase I TERM 1331 1779596 - 1779577 - G 72 -5.8 -4.40993 | gap 1, opp_overlap 1779577 1779590 1779591, overlap 1779592 TAGAAACCATCAAAA GCTA-TGGT TGA ACCAGTAGC TTTAGCTACATGTAG mdh 1781872 - 1780916 - | malate dehydrogenase, NAD-dependent TERM 1332 1781603 - 1781617 + g 74 -6.4 -4.45083 | overlap 1781604 ATTAACTAGATCATT TCTGGA CAT TCCAGG TTTTCTAGCTATACC rimM 1782594 - 1782100 - | 16S rRNA-processing protein TERM 1333 1782575 - 1782558 - G 71 -8.5 -2.89981 | opp_overlap 1782557 1782558 CATAAGGAGATGATA TGATTCC AATA GGAATCA ATTTACTTTCACTTG TERM 1334 1782558 - 1782575 + g 72 -8.5 -3.0568 | opp_overlap 1782558, overlap 1782557 CATAAGGAGATGATA TGATTCC AATA GGAATCA ATTTACTTTCACTTG TERM 1335 1782717 - 1782705 - H 72 -4.9 -4.87273 | AATATGCTATAAAAA CTTAA TTA TTAAG CATATTACAAGAATT TERM 1336 1783375 - 1783394 + G 74 -9.4 -2.68886 | opp_overlap 1783374 1783378, overlap 1783378 GTGTTAAATAAGCAT CAATTACC AGTA GGTAATTG TAAATTGTTAGTTAA OTBS_1847 1782763 - 1785294 + | hypothetical protein fmt 1786517 - 1785594 - | methionyl-tRNA formyltransferase def 1787059 - 1786514 - | peptide deformylase TERM 1337 1787739 - 1787721 - H 71 -4.6 -4.82901 | overlap 1787723 TTCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 1338 1787837 - 1787802 - H 87 -11.4 -3.02043 | opp_overlap 1787810 1787811, overlap 1787811 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA GGGACATATATAGAT TERM 1339 1787810 - 1787829 + H 74 -5 -5.00884 | opp_overlap 1787802 1787811, overlap 1787811 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 1340 1787811 - 1787828 + H 74 -8.5 -3.60048 | opp_overlap 1787811 1787802, overlap 1787810 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1341 1787828 - 1787811 - H 85 -8.5 -4.56883 | opp_overlap 1787810 1787811, overlap 1787802 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1342 1787879 - 1787865 - H 89 -3.6 -6.06529 | GATATATAAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 1343 1787959 - 1787933 - H 74 -5.4 -4.96523 | opp_overlap 1787933 1787936, overlap 1787928 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACGGACTTC TERM 1344 1788112 - 1788098 - H 74 -8.6 -3.25459 | overlap 1788096 ACTAACCCCAGAAGA TGCAGT TAC ACTGCA ACACAAGTCTGATAG TERM 1345 1788605 - 1788589 - H 70 -5.9 -4.30014 | overlap 1788590 TTGAGCAACTCAAAA CTGTTTC ACA GAAACAA ATCAATGAAGAAGAG rhp6 1790877 - 1791263 + | putative ompA-like autotransporter TERM 1346 1792243 - 1792219 - f 71 -6.6 -3.95584 | TTTTGATTAATTAAA TCTCTACTAT GAATT ATAGTAGAAA ATAAGCCTTAAAGCC OTBS_1856 1792550 - 1792804 + | hypothetical protein TERM 1347 1795275 - 1795297 + T 77 -7.8 -4.13767 | ATGTGGTGCTTAGTG TTTTCGTCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 1348 1795524 - 1795550 + T 83 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA TERM 1349 1798384 - 1798364 - T 100 -11.2 -4.2803 | TATTCGAAGGTAAAA TGAGCTGC ATAGA GCAGCTCA AGGATAATAAAGATA TERM 1350 1799043 - 1799019 - T 71 -7.3 -3.76835 | opp_overlap 1799019 1799022 1799026, overlap 1799022 TTGAACAACATAGAA GAATTGATTGT TTT ACAATGAATTC TGACTTGAGAGCAAG TERM 1351 1800495 - 1800513 + T 74 -6.8 -4.27316 | overlap 1800487 AGCCAATCTACGCCG TAGTATGT GTG ACGTACTA TTTTCAGTTAAAACA TERM 1352 1800858 - 1800848 - T 74 -3.2 -5.48028 | GAAATAAAAAGAAAA GCAA CTG CTGC ACTAGTTCATTTTAT TERM 1353 1800975 - 1800955 - T 70 -6.3 -4.10552 | overlap 1800953 1800959 1800966 AATAGCACAAAAAGA TAAAGAAAA TGG CTTTCTTTA CATAAAAGCGTTATT ndk 1802201 - 1801776 - | nucleoside diphosphate kinase TERM 1354 1802878 - 1802888 + H 72 -4 -5.09204 | TCTAAACTCTTGTAT TCAA ATA TTGA TTTTTATTCAACTCT TERM 1355 1803006 - 1802996 - H 71 -6.8 -3.8766 | opp_overlap 1802996, overlap 1802991 1803004 TGATACGATATTAAA CCGT ATA ACGG TTTAGCAAACCGTCG TERM 1356 1803018 - 1803004 - H 76 -8.6 -3.40382 | opp_overlap 1802996, overlap 1802996 1802991 TATTAAACCGTATAA CGGTTT AGC AAACCG TCGCCTTAAGCCTCT TERM 1357 1803641 - 1803623 - H 71 -4.6 -4.82901 | overlap 1803625 TTCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 1358 1803739 - 1803704 - H 87 -11.4 -3.02043 | opp_overlap 1803712 1803713, overlap 1803713 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA GGGACATATATAGAT TERM 1359 1803712 - 1803731 + H 74 -5 -5.00884 | opp_overlap 1803704 1803713, overlap 1803713 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 1360 1803730 - 1803713 - H 85 -8.5 -4.56883 | opp_overlap 1803713 1803712, overlap 1803704 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1361 1803713 - 1803730 + H 74 -8.5 -3.60048 | opp_overlap 1803704 1803713, overlap 1803712 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1362 1803781 - 1803767 - H 89 -3.6 -6.06529 | GATATATAAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 1363 1803861 - 1803835 - H 74 -5.4 -4.96523 | opp_overlap 1803835 1803838, overlap 1803830 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACGGACTTC TERM 1364 1804504 - 1804488 - H 70 -5.9 -4.30014 | overlap 1804489 TTGAGCAACTCAAAA CTGTTTC ACA GAAACAA ATCAATGAAGAAGAG tchA 1807058 - 1807393 + | hypothetical protein tchB 1807941 - 1808342 + | hypothetical protein traB 1808454 - 1808918 + | conjugative pilus assembly protein traV 1808918 - 1809208 + | conjugative transfer protein trbC 1810165 - 1810485 + | conjugative transfer protein traF 1812179 - 1812883 + | conjugative pilus assembly protein OTBS_1880 1816288 - 1815419 - | hypothetical protein TERM 1365 1818530 - 1818541 + r 71 -3 -5.33785 | CTATATTATGCTTTT TTTG ATAG CAAA TTTTTTATACTAATT TERM 1366 1818802 - 1818817 + r 85 -2.6 -5.87996 | CTATAAAGTGCAGAA GTTAAT AAAA ATTAGC TTTTTTTCTTCCTTA coxW 1820021 - 1818942 - | cytochrome c oxidase assembly protein TERM 1367 1819396 - 1819373 - G 70 -4 -5.06735 | opp_overlap 1819373 1819379 TATAAAGTAGAAAAA TAATTATCTT GTTA AAGATTATTA ATTTTATTTTTAAGT TERM 1368 1819725 - 1819704 - G 73 -4.5 -4.99972 | opp_overlap 1819704 ACAAAAGATTAAAAA TGGTATAAT GATT ATTATTCCA GTTATTCTTCCCAAT TERM 1369 1820632 - 1820587 - H 87 -11 -3.35679 | gap 1, opp_overlap 1820578 1820602 1820626, overlap 1820589 1820591 GTTCGCTAGCTACAA TACATAGCTATACTATTATAA AACAG TTATAATAGTATAGCTAT-CA CGATGGCTTAGGTAT TERM 1370 1820631 - 1820589 - H 100 -13.9 -3.24924 | opp_overlap 1820578 1820602 1820626, overlap 1820587 1820591 TCGCTAGCTACAATA CATAGCTATACTATTATAA AACAG TTATAATAGTATAGCTATC ACGATGGCTTAGGTA TERM 1371 1820629 - 1820591 - H 100 -16.5 -3.18945 | opp_overlap 1820578 1820602 1820626, overlap 1820589 1820587 GCTAGCTACAATACA TAGCTATACTATTATAA AACAG TTATAATAGTATAGCTA TCACGATGGCTTAGG OTBS_1887 1822931 - 1823326 + | hypothetical protein TERM 1372 1823522 - 1823532 + T 82 -5.4 -5.39721 | AAATCTTATGATGAG GCTA TTG TAGC TTTTTTCTATACTCA TERM 1373 1823604 - 1823645 + T 83 -9.7 -3.56862 | gap 1, opp_overlap 1823604, overlap 1823636 TAATGACAGTTAAAA TGACTAAAGCTG-ATAAAAG TGA CTTATCTGCAGCTTTAGTCA TTTCAAAAGCTTTAT TERM 1374 1823645 - 1823604 - T 91 -9.7 -4.26019 | gap 1, opp_overlap 1823604 1823636 TAATGACAGTTAAAA TGACTAAAGCTG-ATAAAAG TGA CTTATCTGCAGCTTTAGTCA TTTCAAAAGCTTTAT bcr 1825148 - 1823967 - | Bcr/CflA subfamily drug resistance transporter TERM 1375 1824179 - 1824160 - G 70 -7.2 -3.74747 | opp_overlap 1824149 GTAATTTGCATTAAA GATAATGC TGAT GCATTACC TAAAGTAAATCCAAC TERM 1376 1825351 - 1825370 + H 80 -2.2 -5.69023 | opp_overlap 1825345 1825364, overlap 1825345 1825362 1825364 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTTCATCTTTT TERM 1377 1826320 - 1826305 - H 71 -4.8 -4.80959 | opp_overlap 1826305 TAAGGGAGAAGAAAA GTTAAT TTTT ATTAAC TTCTATACTTTATAG rhp7 1826352 - 1826552 + | hypothetical protein int 1826677 - 1827921 + | phage-related integrase tchA 1828047 - 1828382 + | hypothetical protein traE 1828382 - 1828933 + | conjugative transfer protein tchB 1828930 - 1829406 + | hypothetical protein TERM 1378 1830537 - 1830564 + F 70 -8.6 -2.50291 | gap 1, opp_overlap 1830532, overlap 1830536 1830539 TGTTGAGAACGTTAC TAGCAGCAGTTCT GTT AGAGCTG-TGCTA CTTACTGGAGTCATT traV 1832307 - 1832474 + | conjugative transfer protein tchA 1832768 - 1832433 - | hypothetical protein znuB 1837333 - 1836545 - | Zinc/manganese ABC transporter permease protein znuC 1838027 - 1837314 - | Zinc ABC transporter ATP-binding protein OTBS_1911 1838855 - 1838295 - | hypothetical protein dnaX 1840546 - 1838867 - | DNA polymerase III subunits gamma and tau TERM 1379 1839814 - 1839828 + g 77 -8.6 -3.67634 | opp_overlap 1839814 1839813 CTACTACATCAGAAC TTGCAG TAT CTGCAA TATTTTGGGCTAATG TERM 1380 1840592 - 1840575 - H 81 -4.9 -5.47159 | TTTCAAGAGAAAAAA GAATGTA AAAA TACACTC ATCGTTAAGATAAAA TERM 1381 1844200 - 1844219 + G 79 -8 -4.04413 | opp_overlap 1844200 TCAGATATAATAGGA TTCATAAC TCAA GTTATGAA TTGTTTGATGATATT TERM 1382 1844614 - 1844569 - g 76 -8.7 -3.52472 | gap 1, opp_overlap 1844578 1844586 1844604, overlap 1844578 1844586 ATATTGTTAAAGTAA GCACTATAAGTATAAAAGCTAA TTT TTAGCTTTTATACTT-TAGCAA GTATATGATCCAGAG rhp8 1841601 - 1844597 + | ompA-like, putative autotransporter TERM 1383 1844578 - 1844606 + T 100 -14.9 -3.57119 | opp_overlap 1844578 1844569 1844586, overlap 1844586 1844604 AAGTAAGCACTATAA GTATAAAAGCTAA TTT TTAGCTTTTATAC TTTAGCAAGTATATG TERM 1384 1844606 - 1844578 - T 100 -14.9 -3.48342 | opp_overlap 1844578 1844586 1844604, overlap 1844569 1844586 AAGTAAGCACTATAA GTATAAAAGCTAA TTT TTAGCTTTTATAC TTTAGCAAGTATATG TERM 1385 1844586 - 1844598 + T 76 -6.3 -4.61566 | opp_overlap 1844578 1844569 1844586, overlap 1844578 ACTATAAGTATAAAA GCTAA TTT TTAGC TTTTATACTTTAGCA TERM 1386 1844598 - 1844586 - T 76 -6.3 -4.59069 | opp_overlap 1844586 1844578, overlap 1844578 1844569 ACTATAAGTATAAAA GCTAA TTT TTAGC TTTTATACTTTAGCA OTBS_1914 1846164 - 1844689 - | hypothetical protein TERM 1387 1844794 - 1844810 + g 71 -2.3 -5.33866 | overlap 1844796 ACCTAAAATTGCTAT TACAATA TCA TATTGCA TTTTTTCTAGATTTA xseA 1847592 - 1846222 - | exodeoxyribonuclease VII large subunit TERM 1388 1847625 - 1847637 + r 87 -3.5 -5.86976 | TAATCCATAATTTTA TTTTA TAC TAAAA TTTTTTATTTTATGA OTBS_1916 1848577 - 1847828 - | hypothetical protein OTBS_1917 1848681 - 1849349 + | hypothetical protein TERM 1389 1849348 - 1849370 + F 80 -2 -5.7946 | overlap 1849350 CTTGCAAAATAAAGT GATGTTATGA AAG TTATAGCAGC TTTTTTTATTAAGGA rplU 1849417 - 1849812 + | 50S ribosomal protein L21 TERM 1390 1849942 - 1849932 - g 91 -5.4 -5.76949 | opp_overlap 1849932 TAGGTTTAAAAAAAA CTGA CGG TCAG TTAGTAAATGCTGGT rpmA 1849856 - 1850125 + | 50S ribosomal protein L27 OTBS_1921 1851664 - 1851762 + | hypothetical protein TERM 1391 1853594 - 1853612 + T 78 -6.1 -4.68705 | ATAATTGCTTTCCAA TCTATTG AACGC CAATAGA TTTTCTTGAAATTAT pgsA 1858001 - 1857453 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1392 1857958 - 1857928 - G 88 -6.5 -5.50723 | gap 1, opp_overlap 1857929 1857932, overlap 1857932 TCATCAAAATAAAAA GTAATTAGTATAAT TGGT ATTATACTAATT-C TAGTAGCTGTTAGAA TERM 1393 1857955 - 1857932 - G 79 -8.4 -4.02606 | opp_overlap 1857929 1857932, overlap 1857928 CAAAATAAAAAGTAA TTAGTATAAT TGGT ATTATACTAA TTCTAGTAGCTGTTA TERM 1394 1857932 - 1857955 + g 73 -8.4 -3.44206 | opp_overlap 1857932 1857928, overlap 1857929 CAAAATAAAAAGTAA TTAGTATAAT TGGT ATTATACTAA TTCTAGTAGCTGTTA TERM 1395 1858084 - 1858098 + H 71 -5.7 -4.42868 | ATATACATATATACT GTTGC TTACT GCAAC TATTTTTTGTTCTAT TERM 1396 1859953 - 1859937 - H 71 -7.3 -3.80858 | opp_overlap 1859922 1859933 1859937 TCAGAACTTAGTAAA GAGCTAG GTT CTAACTC TATATTGTTCAAAGT TERM 1397 1860151 - 1860169 + H 73 -8.2 -3.43619 | opp_overlap 1860151 1860150 AATATGCTTTTAAAG CTCAAGGA TTT TCTTTGAG TTAGTTAAGTTTAGT TERM 1398 1862043 - 1862027 - H 71 -2.3 -5.38951 | overlap 1862034 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA TERM 1399 1862367 - 1862352 - H 79 -7.6 -4.32482 | ACTCAGAACTTAAAA GCTCTT GCTA AAGAGC TCAATATTTCAATAA spoT43 1862942 - 1863517 + | spoT-like ppGpp hydrolase TERM 1400 1866312 - 1866294 - T 70 -9 -2.54166 | opp_overlap 1866293, overlap 1866293 TTTTTAAGTAAAATT TTTCATGA CAA TCATGAAA GTGCTTACTCAAATG rlpA 1869065 - 1868400 - | rare lipoprotein A precursor OTBS_1945 1870097 - 1870963 + | putative mechanosensitive ion channel TERM 1401 1871544 - 1871561 + T 70 -3.5 -5.16237 | overlap 1871530 TTATTATAATTGTTT TATAGTA GTTT TGCTATA TTTTTTCCTAAAATT OTBS_1946 1872700 - 1871912 - | hypothetical protein metG 1874248 - 1872713 - | methionyl-tRNA synthetase TERM 1402 1873803 - 1873816 + g 75 -8.1 -3.61356 | overlap 1873813 ACCCATTCTACTTCA GCTCC AGTT GGAGC TTTACCATCGGTAGT TERM 1403 1875433 - 1875422 - g 73 -4.4 -5.06451 | TACTAGCTTAAAAAA TGCT ATGG AGCA AACTTTAAAACTGAA priA 1874433 - 1876373 + | primosome assembly protein PriA virB3 1876748 - 1877035 + | type IV secretion system protein TERM 1404 1877548 - 1877537 - g 70 -4.4 -4.86033 | AAAGTCTGATAAAAA TGCA TGGA TGCA AAGTATGAATGAAAT TERM 1405 1879145 - 1879170 + G 77 -4.1 -5.41746 | gap 1, opp_overlap 1879129 CTCAATTAGTGATAC TCTGATTCAGCA AAC TGCT-ACTCAGA TTTTTTTACCAAATT virB4 1877046 - 1879463 + | type IV secretion system protein TERM 1406 1880555 - 1880565 + G 83 -6.8 -4.76423 | CGTCACATGCGCAGG GCAG TTG CTGC TTTTATGTGTTTATA TERM 1407 1880636 - 1880676 + G 78 -5.7 -4.74504 | opp_overlap 1880664, overlap 1880638 GAAATAAGTCGTAAA GATGTTATTAATACTGTTT TAA AGATAGTGTTAGTAACATA TTTTTCAATTGGAAT TERM 1408 1880638 - 1880674 + G 79 -8.3 -3.98859 | opp_overlap 1880664, overlap 1880636 AATAAGTCGTAAAGA TGTTATTAATACTGTTT TAA AGATAGTGTTAGTAACA TATTTTTCAATTGGA TERM 1409 1881194 - 1881206 + G 71 -5.5 -4.7173 | TTGGCTCCTATATTT GTACC TAT GGTGC TTTTTGAATATACTA virB6-1 1879463 - 1881910 + | type IV secretion system protein virB6-2 1881932 - 1885804 + | type IV secretion system protein virB6-3 1885858 - 1889133 + | type IV secretion system protein virB6-4 1889126 - 1891693 + | type IV secretion system protein proP 1891730 - 1892983 + | proline/betaine transporter mutL 1893012 - 1895054 + | DNA mismatch repair protein gltX 1895180 - 1896580 + | glutamyl-tRNA synthetase TERM 1410 1897519 - 1897487 - g 73 -7.9 -3.64283 | opp_overlap 1897487, overlap 1897488 TAAATCTTTGAATAA CTTTGTTACTGTAAG AGA CTTACAAAAACAAAA TATTAACGGAGCAGC TERM 1411 1897518 - 1897488 - g 72 -9.2 -2.78088 | opp_overlap 1897487, overlap 1897487 AAATCTTTGAATAAC TTTGTTACTGTAAG AGA CTTACAAAAACAAA ATATTAACGGAGCAG cysS 1896645 - 1898081 + | cysteinyl-tRNA synthetase TERM 1412 1898881 - 1898897 + T 73 -8.1 -3.46081 | opp_overlap 1898880 1898877 1898881 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCATTAATTGAGTC uvrD 1901214 - 1899064 - | DNA helicase II, CAI27690 TERM 1413 1899243 - 1899293 + g 86 -11.4 -2.90685 | overlap 1899278 TAGATTGAGAATTAG GCATTGCTGCTGATAATGATTTTT GAA AATAGTTGTTATTAGCAGCACTGC TATAATGTATCATTG TERM 1414 1900788 - 1900816 + g 77 -4 -5.46657 | CTTTCCATCTACTTA TTATTTCGCAAA TATCT TTTGGGGAATAA TTTTTTGTTGAAATG OTBS_1967 1904559 - 1903969 - | hypothetical protein OTBS_1968 1904877 - 1905035 + | hypothetical protein TERM 1415 1905674 - 1905658 - f 71 -2.3 -5.38951 | overlap 1905665 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA TERM 1416 1906494 - 1906480 - g 72 -7.2 -3.9504 | AAGTTTAATAAAATA TGACTT TCT AAGTCA GGTGGATGGAAGAGC TERM 1417 1906632 - 1906612 - g 74 -5.5 -4.76311 | opp_overlap 1906611 TATAAAGAAAAAGAA TCCTGATTT TGA AAATCATGA CTATTACATATAATA OTBS_1971 1906400 - 1906645 + | hypothetical protein TERM 1418 1906734 - 1906722 - g 76 -3.5 -5.36441 | opp_overlap 1906715 GTGGGAGATAAAAAA TTTAA TCT TTAAA GAAAACTGTATGGGA OTBS_1972 1906681 - 1906893 + | hypothetical protein spoT44 1908148 - 1907579 - | spoT-like ppGpp hydrolase TERM 1419 1907672 - 1907685 + g 71 -3.1 -5.16237 | TTGCTGAGTTTCAAT GACGA TTTT TTGTC TTTTTTCATAAGGTT TERM 1420 1907788 - 1907805 + g 79 -2.7 -5.89921 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTATTATCCT hkp38 1909106 - 1908249 - | putative signal transduction histidine kinase hkp39 1909857 - 1909114 - | putative signal transduction histidine kinase TERM 1421 1910124 - 1910104 - R 88 -5.5 -5.55855 | TCTAAAAAAACAAAA TATCTCTCA AAA TGAGATATA CAATTGATTCTGAGT rhp5 1910925 - 1910209 - | hypothetical protein TERM 1422 1911210 - 1911229 + H 71 -2.2 -5.38348 | opp_overlap 1911204 1911223, overlap 1911204 1911221 1911223 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT dam30 1911401 - 1912207 + | site-specific DNA adenine methylase rhp6 1912777 - 1912235 - | putative ompA-like autotransporter ank1C14 1913741 - 1912797 - | ankyrin repeat-containing protein TERM 1423 1915173 - 1915192 + r 90 -10.8 -3.65581 | opp_overlap 1915159 ATGTAGCTGCAATTT TTTGCAGG TTCA CCTGCAAA TTCTTGCAAATTGAT rhp6 1915391 - 1915182 - | putative ompA-like autotransporter OTBS_1984 1916159 - 1916959 + | hypothetical protein TERM 1424 1917127 - 1917095 - f 72 -7.9 -3.60234 | opp_overlap 1917095 GTACATAGTGCTAAA GTTGTAAAAATAGCA AAA TTCTACCTTTACAAC TGCTTTTGCAATGAA TERM 1425 1918340 - 1918325 - f 71 -4.8 -4.80959 | opp_overlap 1918325 TAAGGGAGAAGAAAA GTTAAT TTTT ATTAAC TTCTATACTTTATAG rhp7 1918372 - 1918572 + | hypothetical protein int 1918697 - 1919941 + | phage-related integrase tchA 1920067 - 1920402 + | hypothetical protein traE 1920402 - 1920953 + | conjugative transfer protein tchB 1920950 - 1921351 + | hypothetical protein traB 1921463 - 1921927 + | conjugative pilus assembly protein traV 1921927 - 1922217 + | conjugative transfer protein trbC 1923174 - 1923494 + | conjugative transfer protein TERM 1426 1924663 - 1924643 - f 71 -7.7 -3.41602 | CGTATTCTAGCACAA GATAATGCT TGT AACATTATC AATACAGTATTTGTT TERM 1427 1930091 - 1930101 + F 78 -4 -5.40004 | ACATGATGCCTATTT TACA ATC TGTA TTTTTTGCTTTAGTA TERM 1428 1930183 - 1930238 + F 73 -8.6 -3.06302 | gap 1, opp_overlap 1930183, overlap 1930199 AACATACTAAAAACA TGGATT-TTGTTAATAATATGGGTCAG CAG CTGGCCAGTATTTTTTACAATAATCCA TTGCCTCGGAATGAT TERM 1429 1930199 - 1930221 + F 75 -4.8 -5.06451 | opp_overlap 1930183, overlap 1930183 GGATTTTGTTAATAA TATGGGTCAG CAG CTGGCCAGTA TTTTTTACAATAATC tpr1B18 1931709 - 1932848 + | TPR repeat-containing protein TERM 1430 1933406 - 1933383 - T 73 -8.2 -3.38674 | overlap 1933382 AAAAGCGCTAAAAAG GCCTCGAAAA TCTG TTTTGGAGGC TTGCCATTAGTAAAG tnE 1935654 - 1934611 - | transposase and inactivated derivative TERM 1431 1935125 - 1935135 + g 74 -3.2 -5.48028 | ATAAAATGAACTAGT GCAG CAG TTGC TTTTCTTTTTATTTC TERM 1432 1935487 - 1935469 - G 74 -6.8 -4.27316 | opp_overlap 1935485, overlap 1935485 TGTTTTAACTGAAAA TAGTACGT CAC ACATACTA CGGCGTAGATTTGCT TERM 1433 1937600 - 1937620 + H 100 -11.2 -4.2803 | TATTTTTATTACCCT TGAGCTGC TCTAT GCAGCTCA TTTTACCTTCGAATA OTBS_2006 1940183 - 1940383 + | hypothetical protein TERM 1434 1940457 - 1940429 - g 91 -5.3 -5.7946 | TCTCCAACAAAAAAA GGCTAAGCTAATC ATG GATGAGGTTAACC TTAAAATTAAAGAAC TERM 1435 1940704 - 1940682 - g 77 -7.8 -4.13767 | GCCGTGATTTTAAAA TTTTCCTCTG AAC CAGACGAAAA CACTAAGCTCCACAT traD_Ti 1940385 - 1940840 + | conjugative transfer protein TERM 1436 1941207 - 1941190 - g 86 -5.7 -5.46629 | AATATGCTAAAAAAA CATATAA CACA TTATATG CAGTAGAAAAGCTTA rhp4 1940928 - 1941467 + | hypothetical protein spoT45 1942079 - 1941504 - | spoT-like ppGpp hydrolase TERM 1437 1941567 - 1941595 + g 73 -7.5 -3.66095 | opp_overlap 1941567, overlap 1941568 TGGTAGATTAAGGTA TTCAGCAAGAGGT ATA AATTCTTGCTGAG TTTCAATGACGATTT TERM 1438 1941568 - 1941594 + g 71 -8.8 -2.79175 | opp_overlap 1941567, overlap 1941567 GGTAGATTAAGGTAT TCAGCAAGAGGT ATA AATTCTTGCTGA GTTTCAATGACGATT TERM 1439 1941603 - 1941616 + g 71 -3.1 -5.16237 | TTGCTGAGTTTCAAT GACGA TTTT TTGTC TTTTTTCATAAGGTT TERM 1440 1941719 - 1941736 + g 79 -2.7 -5.89921 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTATTATCCT hkp40 1943037 - 1942180 - | putative signal transduction histidine kinase hkp41 1943788 - 1943045 - | putative signal transduction histidine kinase TERM 1441 1944055 - 1944035 - H 88 -5.5 -5.55855 | TCTAAAAAAACAAAA TATCTCTCA AAA TGAGATATA CAATTGATTCTGAGT TERM 1442 1945018 - 1945051 + H 78 -9.2 -3.32022 | GAAATCTTAGCAGTT CTGAAAAAATATTT TGACAT GAATATTTTTTCAG TTAGTATGTAAACAA ank2A11 1945118 - 1947091 + | ankyrin repeat-containing protein TERM 1443 1947155 - 1947193 + F 76 -2.7 -5.5074 | gap 1, opp_overlap 1947162 1947166, overlap 1947162 1947166 AAAAATATAGCAAGA AGAACAATAAAGTTAAAC TTAT GTTTAACTTTATT-TCCA TTTTTTCTTGGCTTA TERM 1444 1947162 - 1947187 + F 100 -10.7 -4.0964 | opp_overlap 1947162 1947166, overlap 1947155 1947166 TAGCAAGAAGAACAA TAAAGTTAAAC TTAT GTTTAACTTTA TTTCCATTTTTTCTT TERM 1445 1947187 - 1947162 - f 100 -10.7 -4.1157 | opp_overlap 1947162 1947155 1947166, overlap 1947166 TAGCAAGAAGAACAA TAAAGTTAAAC TTAT GTTTAACTTTA TTTCCATTTTTTCTT TERM 1446 1947183 - 1947166 - f 81 -7.1 -4.61648 | opp_overlap 1947162 1947155 1947166, overlap 1947162 AAGAAGAACAATAAA GTTAAAC TTAT GTTTAAC TTTATTTCCATTTTT TERM 1447 1947166 - 1947183 + F 81 -7.1 -4.57205 | opp_overlap 1947166 1947162, overlap 1947162 1947155 AAGAAGAACAATAAA GTTAAAC TTAT GTTTAAC TTTATTTCCATTTTT TERM 1448 1947514 - 1947533 + F 71 -2.2 -5.38348 | opp_overlap 1947508 1947527, overlap 1947508 1947525 1947527 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT dam31 1947706 - 1948518 + | site-specific DNA adenine methylase OTBS_2014 1949814 - 1948714 - | hypothetical protein tchD 1951938 - 1950244 - | hypothetical protein TERM 1449 1950485 - 1950501 + g 72 -7.3 -3.80858 | opp_overlap 1950485 1950481 1950488 ACTTTGAACAATATA GAGTTAG AAC CTAGCTC TTTACTAAGTTCTGA TERM 1450 1951046 - 1951060 + g 74 -8.6 -3.3375 | opp_overlap 1951043 1951039, overlap 1951044 1951059 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGTGTTAGT TERM 1451 1951440 - 1951457 + g 88 -8.5 -4.46233 | opp_overlap 1951425 TGTACCTGAAACTTT TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 1452 1951523 - 1951543 + g 95 -9.1 -5.08011 | TCTCCTTTTGTTTCT TTTTCAGTG AAA CGCTGAAAA TTTTTTAGAAGTTTT TERM 1453 1953481 - 1953500 + r 72 -2.8 -5.4588 | overlap 1953483 GTTTCGAAAGAGGTC TAGTAGCA ATAA TGCAACTG TTTTTTATCGTTTTA TERM 1454 1953840 - 1953820 - R 75 -4.8 -5.08011 | AAAACTTCTAAAAAA TTTTCAGC GTTTT ACTGAAAA AGAAAAAAAGAAGAA TERM 1455 1953868 - 1953850 - R 87 -2.4 -6.20267 | TGAAAAAGAAAAAAA GAAGAAAA AAT TGTCCTTC TACAACAAAAAAATT TERM 1456 1953923 - 1953904 - R 90 -10.8 -3.65581 | opp_overlap 1953912 ATCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT rhp9 1955226 - 1954810 - | hypothetical protein TERM 1457 1955647 - 1955632 - H 71 -4.8 -4.80959 | opp_overlap 1955632 TAAGGGAGAAGAAAA GTTAAT TTTT ATTAAC TTCTACACTTTATAG rhp7 1955679 - 1955879 + | hypothetical protein int 1956004 - 1957248 + | phage-related integrase tchA 1957374 - 1957709 + | hypothetical protein traE 1957709 - 1958260 + | conjugative transfer protein tchB 1958257 - 1958658 + | hypothetical protein traB 1958770 - 1959234 + | conjugative pilus assembly protein traV 1959234 - 1959524 + | conjugative transfer protein trbC 1960481 - 1960801 + | conjugative transfer protein traD_F 1964810 - 1965070 + | conjugative transfer protein TERM 1458 1967242 - 1967268 + F 81 -2.5 -5.82036 | gap 1 TGCCGTTATAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT TERM 1459 1967376 - 1967387 + F 70 -4.4 -4.86621 | opp_overlap 1967371 1967376 AATATATAAATAAAA GCAT TGCC ATGC TTTTTGGTTGCAACT TERM 1460 1967387 - 1967376 - f 72 -4.4 -5.08878 | opp_overlap 1967376, overlap 1967371 AATATATAAATAAAA GCAT TGCC ATGC TTTTTGGTTGCAACT TERM 1461 1967404 - 1967422 + F 81 -2.5 -5.77853 | gap 1 TTTTGGTTGCAACTT TATAGACG ATAT CG-CTATA TTTTTTTTAACGATT TERM 1462 1968848 - 1968903 + F 100 -19.9 -2.5602 | opp_overlap 1968853 1968860 1968884, overlap 1968811 1968843 1968853 1968860 CATATTTTCTTGTTA TTTAATTGATAATATATTAATAATT AAATAA AATTATTAATATATTATCAATTAAA TAACTTAGGTAATTA TERM 1463 1968853 - 1968898 + F 100 -15.4 -3.10112 | opp_overlap 1968853 1968860 1968884, overlap 1968811 1968843 1968848 1968860 TTTCTTGTTATTTAA TTGATAATATATTAATAATT AAATAA AATTATTAATATATTATCAA TTAAATAACTTAGGT TERM 1464 1968898 - 1968853 - f 100 -15.4 -3.05384 | opp_overlap 1968811 1968843 1968848 1968853 1968860, overlap 1968860 1968884 TTTCTTGTTATTTAA TTGATAATATATTAATAATT AAATAA AATTATTAATATATTATCAA TTAAATAACTTAGGT TERM 1465 1968860 - 1968891 + F 71 -7.7 -3.4285 | opp_overlap 1968853 1968860 1968884, overlap 1968811 1968843 1968853 1968848 TTATTTAATTGATAA TATATTAATAATT AAATAA AATTATTAATATA TTATCAATTAAATAA TERM 1466 1968891 - 1968860 - f 71 -7.7 -3.4285 | opp_overlap 1968811 1968843 1968860 1968853 1968848, overlap 1968853 1968884 TTATTTAATTGATAA TATATTAATAATT AAATAA AATTATTAATATA TTATCAATTAAATAA rhp4 1968918 - 1969451 + | hypothetical protein TERM 1467 1974129 - 1974161 + T 79 -9.4 -3.45602 | opp_overlap 1974126 1974129, overlap 1974126 1974121 1974134 AGGTCATAGTAATAG CCAAGCTATTATAA CTGCT TTATAGTAGTTTGG TTATACATATTTAAT TERM 1468 1974526 - 1974500 - T 71 -9 -2.79915 | opp_overlap 1974500 ATGTAGTTTATCATA TTTATCATTCAT AAT ATGAATAATAAA TTACTAGCAATATTG lspA 1975013 - 1974504 - | lipoprotein signal peptidase TERM 1469 1974765 - 1974755 - G 85 -2.6 -6.22691 | CAATAAGAAAAAAAA TATT GCC AATA TCATAATAATAGTTA TERM 1470 1975212 - 1975192 - H 75 -9.1 -2.91681 | overlap 1975195 GTGGAATGGTAGACA CAACAGATT CAA AATCTGTCG CTCATAAAAGCGTGC tpr1B19 1975308 - 1976102 + | TPR repeat-containing protein OTBS_2045 1976736 - 1976954 + | hypothetical protein TERM 1471 1977451 - 1977433 - f 71 -4.6 -4.82901 | overlap 1977435 TTCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 1472 1977549 - 1977514 - f 87 -11.4 -3.02043 | opp_overlap 1977522 1977523, overlap 1977523 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA GGGACATATATAGAT TERM 1473 1977522 - 1977541 + F 74 -5 -5.00884 | opp_overlap 1977514 1977523, overlap 1977523 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 1474 1977523 - 1977540 + F 74 -8.5 -3.60048 | opp_overlap 1977523 1977514, overlap 1977522 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1475 1977540 - 1977523 - f 85 -8.5 -4.56883 | opp_overlap 1977522 1977523, overlap 1977514 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1476 1977591 - 1977577 - f 89 -3.6 -6.06529 | GATATATAAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 1477 1977671 - 1977645 - f 74 -5.4 -4.96523 | opp_overlap 1977645 1977648, overlap 1977640 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACGGACTTC TERM 1478 1978314 - 1978298 - f 70 -5.9 -4.30014 | overlap 1978299 TTGAGCAACTCAAAA CTGTTTC ACA GAAACAA ATCAATGAAGAAGAG rhp6 1980585 - 1981088 + | putative ompA-like autotransporter TERM 1479 1981950 - 1981926 - f 71 -6.6 -3.95584 | TTTTGATTAATTAAA TCTCTACTAT GAATT ATAGTAGAAA ATAAGCCTTAAAGCC TERM 1480 1982096 - 1982077 - f 71 -2.2 -5.38348 | opp_overlap 1982069 1982090, overlap 1982069 1982067 1982090 AAAAAGATGAAAAAA TTTTTCAT AATT ATGACAAA AAGTCATGTACTGAT TERM 1481 1982939 - 1982971 + G 72 -8.7 -3.07816 | opp_overlap 1982931 1982945, overlap 1982945 AAAGCTAGCTTTGAA TTATAAGACTAAAAT GTT GTTTCAGTCTTATAA TTCAATAAGTGAAGA ank2A12 1982496 - 1983443 + | ankyrin repeat-containing protein TERM 1482 1983902 - 1983888 - g 84 -10 -3.46178 | AGAAACGCATTACAA GCAAGC TAA GCTTGC TACAACAACAGTAGA OTBS_2052 1983421 - 1984470 + | hypothetical protein hkp42 1985015 - 1985842 + | putative signal transduction histidine kinase TERM 1483 1986447 - 1986437 - f 70 -5.4 -4.62984 | opp_overlap 1986437 1986435 TTAGGAGATATAAAA GCTA AAT TAGC TGATTTTGAGTTGGT TERM 1484 1987099 - 1987082 - g 79 -2.7 -5.89921 | AGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTCAAACATTTTATA TERM 1485 1987251 - 1987223 - g 73 -7.5 -3.66095 | opp_overlap 1987219, overlap 1987224 AAATCGTTATTGAAA CTCAGCAAGAATT TAT ACCTCTTGCTGAA TATCTTAAATTACCA TERM 1486 1987250 - 1987224 - g 71 -8.8 -2.79175 | opp_overlap 1987219, overlap 1987223 AATCGTTATTGAAAC TCAGCAAGAATT TAT ACCTCTTGCTGA ATATCTTAAATTACC spoT47 1986739 - 1987332 + | spoT-like ppGpp hydrolase rhp4 1987945 - 1987400 - | hypothetical protein TERM 1487 1988184 - 1988206 + r 77 -7.8 -4.13767 | ATGTGGTGCTTAGTG TTTTCGTCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 1488 1988432 - 1988460 + r 91 -5.3 -5.7946 | GTTCTTTGATTTTGA GGTTAACCTCATC CAT GATTAGCTTAGCC TTTTTTTGTTGGAGA TERM 1489 1989248 - 1989234 - R 72 -8.6 -2.90029 | overlap 1989233 TGAGGTAAATATAAT CTACTG TGA CAGTAG CGATAATGTATTTTT OTBS_2058 1991051 - 1989315 - | hypothetical protein TERM 1490 1991384 - 1991368 - R 72 -2.9 -5.40072 | overlap 1991369 TTCCCTGCAAAAAAA CGGCTTT TTA AACGCCA ATTTAGGATAAGGAG TERM 1491 1991581 - 1991565 - R 73 -8.1 -3.46081 | opp_overlap 1991565 1991564 GACTCAATTAAGGAA CGTTTAT TTA ATAAACG CTTATCATCTATGTC OTBS_2060 1992571 - 1992371 - | hypothetical protein TERM 1492 1995152 - 1995132 - H 100 -11.2 -4.2803 | TATTCGAAGGTAAAA TGAGCTGC ATAGA GCAGCTCA AGGGTAATAAAAATA TERM 1493 1997350 - 1997332 - g 72 -2.5 -5.43866 | gap 1 GAATCGTTAAAAAAA TATAG-CG ATAT CGTCTATA AAGTTGCAACCAAAA TERM 1494 1997367 - 1997378 + G 73 -4.4 -5.08878 | opp_overlap 1997367, overlap 1997362 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 1495 1997378 - 1997367 - g 70 -4.4 -4.86621 | opp_overlap 1997367 1997362 AGTTGCAACCAAAAA GCAT GGCA ATGC TTTTATTTATATATT TERM 1496 1997512 - 1997486 - g 79 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTATAACGGCA tnE 1997164 - 1998075 + | transposase and inactivated derivative TERM 1497 1998637 - 1998612 - T 71 -6.9 -3.88498 | gap 1, overlap 1998607 TTTCTACACATCAAA GCCTTGAT-AGC TAT GCTTATCCAGGC TGAAATAAGTGGGCG TERM 1498 1999280 - 1999303 + T 73 -8.2 -3.38674 | overlap 1999279 CTTTACTAATGGCAA GCCTCCAAAA CAGA TTTTCGAGGC CTTTTTAGCGCTTTT tpr1B20 2000494 - 1999832 - | TPR repeat-containing protein TERM 1499 2001335 - 2001313 - R 75 -4.8 -5.06451 | opp_overlap 2001316 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAATAGAATCC traN 2006128 - 2004467 - | conjugative transfer protein TERM 1500 2005502 - 2005485 - G 72 -8.5 -3.14795 | overlap 2005483 AAATTTCTACCAATA TGGTGTA TAGA TACACCA AGCCTATTAGCAATA trbC 2006471 - 2006151 - | conjugative transfer protein tchE 2007737 - 2007549 - | hypothetical protein traW 2008479 - 2007820 - | conjugative transfer protein TERM 1501 2007875 - 2007885 + g 71 -6.8 -4.00132 | TCTTGCTCTATTATG GCTG GCA CAGC TTGTATTTTAAATTT traV 2011276 - 2010947 - | conjugative transfer protein traB 2012607 - 2011276 - | conjugative pilus assembly protein tchC 2012993 - 2012661 - | hypothetical protein tchB 2013613 - 2013137 - | hypothetical protein tchA 2014496 - 2014161 - | hypothetical protein TERM 1502 2014473 - 2014506 + g 84 -11.1 -3.08776 | overlap 2014470 2014475 2014478 AATCACCTTCAGCCT CAATTGTAGCATGAG ATTT CTCATGCTACTACTG TGATTTTCAAAAATT TERM 1503 2014478 - 2014501 + g 100 -14 -2.75838 | overlap 2014475 2014473 2014470 CCTTCAGCCTCAATT GTAGCATGAG ATTT CTCATGCTAC TACTGTGATTTTCAA int 2015880 - 2014552 - | phage-related integrase TERM 1504 2015126 - 2015116 - G 84 -5.4 -5.38958 | opp_overlap 2015116 AGCTATAAATAAAAA CAGA GTT TCTG ATATCTTTGATTGTT TERM 1505 2017479 - 2017459 - H 100 -9.1 -5.07107 | GAAACTTCTAAAAAA TTTTCAGCG TTT CACTGAAAA AGAAAAAAAGAAGAA TERM 1506 2017507 - 2017489 - H 87 -2.4 -6.20267 | TGAAAAAGAAAAAAA GAAGAAAA AAT TGTCCTTC TACAACAAAAAAATT TERM 1507 2017562 - 2017543 - H 90 -10.8 -3.65581 | opp_overlap 2017551 ACCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT TERM 1508 2018101 - 2018087 - H 74 -8.6 -3.3375 | opp_overlap 2018084 2018080, overlap 2018077 2018085 ACTAACACCAGAAGA TGCAGT TAT ACTGCA ACGTATGTCTAGTAG TERM 1509 2018683 - 2018667 - H 71 -7.3 -3.80858 | opp_overlap 2018652 2018667 2018663 TCAGAACTTAGTAAA GAGCTAG GTT CTAACTC TATATTGTTCAAAGT TERM 1510 2019810 - 2019782 - g 73 -7.5 -3.69934 | opp_overlap 2019782, overlap 2019783 AAATAATATTTGAAA CTCAGCAAGAATT TAT AGCTCTTGCTGAA TACCTTAAACTACCA TERM 1511 2019809 - 2019783 - g 71 -8.8 -2.80876 | opp_overlap 2019782, overlap 2019782 AATAATATTTGAAAC TCAGCAAGAATT TAT AGCTCTTGCTGA ATACCTTAAACTACC spoT48 2019298 - 2019873 + | spoT-like ppGpp hydrolase ank1C15 2020055 - 2020357 + | ankyrin repeat-containing protein OTBS_2087 2021024 - 2022367 + | hypothetical protein TERM 1512 2022371 - 2022342 - T 72 -2.9 -5.41143 | opp_overlap 2022351 CATTTTTTAAAAAAA CTTCTTTACCTTC TCGT GAAGTTTAAAAAG TCTGCATTTTTAACG TERM 1513 2022959 - 2022994 + T 100 -11.4 -3.92542 | opp_overlap 2022958 2022963, overlap 2022963 ATATATCCATTATAT CAAACTCAAAGCTAGT TAAT ATTAACTTTGAGTTTG TTCTTTAGCAATCCA TERM 1514 2022963 - 2022990 + T 76 -6.4 -4.56978 | opp_overlap 2022958 2022963, overlap 2022959 ATCCATTATATCAAA CTCAAAGCTAGT TAAT ATTAACTTTGAG TTTGTTCTTTAGCAA trmU 2024089 - 2022980 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1515 2023867 - 2023888 + g 87 -10.3 -3.62275 | GCACATAGTGTGGAA TTTGTAGCT GGTT AGCTACAAA TTTAGCATCATAAAT TERM 1516 2027275 - 2027233 - R 90 -8.3 -4.88795 | opp_overlap 2027233 AGTCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA TERM 1517 2027233 - 2027275 + r 87 -8.3 -4.77157 | opp_overlap 2027233 AGTCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGCTGGATTGA tnD 2028235 - 2027273 - | transposase and inactivated derivative TERM 1518 2027781 - 2027797 + g 73 -8.1 -3.54574 | overlap 2027778 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG ank1C16 2028461 - 2028718 + | ankyrin repeat-containing protein OTBS_2094 2029985 - 2029125 - | hypothetical protein rhp6 2030581 - 2030841 + | putative ompA-like autotransporter OTBS_2097 2031805 - 2031578 - | hypothetical protein TERM 1519 2031833 - 2031820 - H 76 -3.9 -5.44119 | TCTATTTTAAAAAAA TGAAA AAAT TTTCA GAAATATTACAAAAA rhp4 2032135 - 2032665 + | hypothetical protein TERM 1520 2032680 - 2032707 + T 71 -2.1 -5.42259 | gap 1, opp_overlap 2032688, overlap 2032681 2032684 ATCAATTATAGCGCT ATATGGAAGTCA TGTTT TGACTTCC-TAC TTTTTTTAAACCTCA TERM 1521 2032684 - 2032704 + T 81 -9.8 -3.49966 | opp_overlap 2032688, overlap 2032681 2032680 ATTATAGCGCTATAT GGAAGTCA TGTTT TGACTTCC TACTTTTTTTAAACC dam34 2032969 - 2032757 - | site-specific DNA adenine methylase hkp44 2033318 - 2034064 + | putative signal transduction histidine kinase TERM 1522 2034769 - 2034759 - g 71 -5.4 -4.68724 | opp_overlap 2034757 2034759 TTAGGGAATATAAAA GCTA AAT TAGC TGATTTTGACTTGGT hkp45 2034069 - 2034926 + | putative signal transduction histidine kinase TERM 1523 2035387 - 2035370 - f 85 -2.7 -5.89921 | AGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTCAAACATTTTATA tnA 2036283 - 2037158 + | transposase and inactivated derivative OTBS_2105 2044533 - 2037634 - | hypothetical protein TERM 1524 2042720 - 2042740 + g 79 -3.3 -5.58454 | AATTCTCTTTTATAT TTCTCAATA TCT TCTTGGGAA TTTTTTTCATCTGAC OTBS_2106 2045071 - 2044526 - | hypothetical protein TERM 1525 2045541 - 2045574 + r 83 -9.9 -3.58329 | opp_overlap 2045543 2045548, overlap 2045538 2045543 2045548 TCAAACACTATATTC AAGATAATATACAAT TATA ATTGTATATTATCTC TTAATTCTTACTTAA TERM 1526 2045543 - 2045572 + r 100 -12.5 -3.35762 | opp_overlap 2045543 2045548, overlap 2045541 2045538 2045548 AAACACTATATTCAA GATAATATACAAT TATA ATTGTATATTATC TCTTAATTCTTACTT TERM 1527 2045572 - 2045543 - R 100 -12.5 -3.16556 | opp_overlap 2045543 2045541 2045538 2045548, overlap 2045548 AAACACTATATTCAA GATAATATACAAT TATA ATTGTATATTATC TCTTAATTCTTACTT rhp2 2046953 - 2045634 - | hypothetical protein TERM 1528 2048433 - 2048455 + r 77 -7.8 -4.13767 | ATGTAGCGCTTAGTG TTTTCATCTG GTT CAGAGGAAAA TTTTAAAATCACAGC TERM 1529 2048682 - 2048708 + r 83 -3 -5.7946 | TTCTTTGATTTTGAG GTTAACCTCATC CAT GATTAGCTTAGC TTTTTTTGTTGGAGA TERM 1530 2057847 - 2057821 - R 83 -3 -5.7946 | TCTCCAACAAAAAAA GCTAAGCTAATC ATG GATGAGGTTAAC CTCAAAATTAAAGAA TERM 1531 2058064 - 2058042 - R 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGACGAAAA CACTAAGCACCACAT xth1 2059027 - 2058242 - | exodeoxyribonuclease III TERM 1532 2059271 - 2059293 + r 90 -6.4 -5.57729 | overlap 2059254 2059253 2059273 AGCAAGAGGTATAAA TTCTTGTTGA GTT TCAATAAGGA TTTTTTGTCTTCTTT TERM 1533 2059505 - 2059556 + r 100 -12 -4.2231 | opp_overlap 2059507 2059509 2059511 2059514 2059521, overlap 2059506 2059509 GTTATTAGTTGAAAC TATATACAAGAGATAATATACAAT TCTA ACTGTATATTATCTCTTGTATAGC TTTTGACTGATACTT TERM 1534 2059506 - 2059555 + r 100 -15.5 -3.12663 | opp_overlap 2059507 2059509 2059511 2059514 2059521, overlap 2059505 2059509 TTATTAGTTGAAACT ATATACAAGAGATAATATACAAT TCTA ACTGTATATTATCTCTTGTATAG CTTTTGACTGATACT TERM 1535 2059554 - 2059507 - R 100 -21.2 -2.93089 | opp_overlap 2059506 2059505 2059509, overlap 2059509 2059511 2059514 2059521 TATTAGTTGAAACTA TATACAAGAGATAATATACAAT TCTA ACTGTATATTATCTCTTGTATA GCTTTTGACTGATAC TERM 1536 2059552 - 2059509 - R 100 -19.4 -3.01497 | opp_overlap 2059506 2059505 2059509, overlap 2059507 2059511 2059514 2059521 TTAGTTGAAACTATA TACAAGAGATAATATACAAT TCTA ACTGTATATTATCTCTTGTA TAGCTTTTGACTGAT TERM 1537 2059509 - 2059552 + r 100 -17.2 -2.76671 | opp_overlap 2059509 2059507 2059511 2059514 2059521, overlap 2059506 2059505 TTAGTTGAAACTATA TACAAGAGATAATATACAAT TCTA ACTGTATATTATCTCTTGTA TAGCTTTTGACTGAT TERM 1538 2059550 - 2059511 - R 100 -17.6 -3.06037 | opp_overlap 2059509 2059506 2059505, overlap 2059509 2059507 2059514 2059521 AGTTGAAACTATATA CAAGAGATAATATACAAT TCTA ACTGTATATTATCTCTTG TATAGCTTTTGACTG TERM 1539 2059547 - 2059514 - R 100 -13.5 -3.66787 | opp_overlap 2059509 2059506 2059505, overlap 2059511 2059509 2059507 2059521 TGAAACTATATACAA GAGATAATATACAAT TCTA ACTGTATATTATCTC TTGTATAGCTTTTGA rhp2 2059912 - 2059643 - | hypothetical protein TERM 1540 2061187 - 2061201 + r 82 -7.2 -4.8269 | GAACGCACTATTTAT GATCTT TGG AAGATC TTTTTGATACTTATC TERM 1541 2062630 - 2062584 - R 72 -4.5 -4.93595 | AGAAAAAGTTAAAAA GAGATAATGTACAATAGACCT TGCTT AGGCCGATTCTTCAATATCTC AAGTTTTTGGTTAAA TERM 1542 2062958 - 2062988 + r 80 -6.3 -4.98522 | gap 1 GTCCTGTTCAATGGA GCCTGATTCTCTTA GATC TGAGAGAAT-GGGC TTTTTATCTGACCTT TERM 1543 2064129 - 2064149 + r 71 -4.9 -4.78512 | overlap 2064118 TAAGTCTTGATTGTA TTAAGATTA TTG TAATTTTAA TTTTGATTTGTTTTT TERM 1544 2064317 - 2064335 + r 71 -6.8 -3.92869 | AGTTTTAGTTACCGA GCAATAAA CTG TTTGTTGC TTTGTAGATGAATGC TERM 1545 2065598 - 2065615 + r 77 -5.7 -4.88228 | GCAAAAATTGTCTAA TAAATAG TATA CTATTTA TTTTTCATGTTGGGT TERM 1546 2065855 - 2065839 - R 71 -2.3 -5.38951 | overlap 2065846 AAGGTATACAAAAAA TTCATAA TAA TTCTGAA TTACCAAAGAAAAAA TERM 1547 2066094 - 2066144 + r 93 -8.9 -4.93177 | opp_overlap 2066094 2066104 TCTAATTACATATCA GAAATAGTAATTTTATAAAAA CTTATATCT TTTTTATAAAATTGTTATTTC TTTTATTGATTTTTA OTBS_2124 2069986 - 2066336 - | hypothetical protein TERM 1548 2067926 - 2067944 + g 78 -9 -3.52113 | opp_overlap 2067918, overlap 2067918 AATATTATTAGCTAC TGCTAATT TAA AATTAGCA TTCTGCATTTTAGCA TERM 1549 2070424 - 2070450 + r 100 -15.4 -3.57462 | opp_overlap 2070424, overlap 2070431 TACTAATTTGAAAAA TATGAAAGCTAG AAA CTAGCTTTCATA TTTACAGATCCAATA TERM 1550 2070450 - 2070424 - R 100 -15.4 -4.67904 | opp_overlap 2070424 2070431 TACTAATTTGAAAAA TATGAAAGCTAG AAA CTAGCTTTCATA TTTACAGATCCAATA TERM 1551 2070431 - 2070443 + r 76 -7.7 -4.00532 | opp_overlap 2070424, overlap 2070424 TTGAAAAATATGAAA GCTAG AAA CTAGC TTTCATATTTACAGA rhp8 2072714 - 2070432 - | ompA-like, putative autotransporter TERM 1552 2071979 - 2071991 + g 73 -7.7 -3.71998 | opp_overlap 2071979 2071978 TAGCAATATCTAAAT GCAAG TTC CTTGC TTCTGTTGATAAATC TERM 1553 2072067 - 2072081 + g 72 -7.2 -3.78998 | TCTTAGAGCTGTATG GAATTG ACG CAATTC TTGATTTTGATTTAA TERM 1554 2073829 - 2073844 + H 74 -7.6 -3.84027 | opp_overlap 2073827 2073825, overlap 2073827 AAGTTATAAAATATT GTAGCA TTAT TGCTAC TATTATTTTTAATAA TERM 1555 2077127 - 2077109 - H 81 -7.4 -4.52345 | opp_overlap 2077108 AGATTAGTAAATAAA TGTAGACC ATT GGTCAACA GTTGATAAAATAACT TERM 1556 2080771 - 2080743 - g 71 -5.3 -4.71186 | opp_overlap 2080743 AGTAGTAATATAAAA CTAGAATATGTTG CTT CATCAAACTCTAG TACTGTGGATATTAA rhp8 2078988 - 2080937 + | ompA-like, putative autotransporter TERM 1557 2080919 - 2080945 + F 100 -9.7 -5.2189 | opp_overlap 2080919 2080926 TGTTGGATCTTTAAA TATAAAAGCTA ATTTC TAGCTTTTATA TTTTTTGCTACTTAA TERM 1558 2080945 - 2080919 - f 85 -10.4 -3.57144 | opp_overlap 2080919, overlap 2080926 TGTTGGATCTTTAAA TATAAAAGCTAA TTT CTAGCTTTTATA TTTTTTGCTACTTAA TERM 1559 2084326 - 2084302 - f 83 -7.9 -4.63928 | opp_overlap 2084302 ACATTAGTGTAAAAA TACATACCAGA ATC TCTGGCAAGTA TTATCAATATGAAAA TERM 1560 2085097 - 2085108 + F 71 -2.2 -5.43974 | TACATTTTTTCATGT TGGG TTAT TCCA TTTTTATTTAATTTT OTBS_2143 2085200 - 2085334 + | hypothetical protein rluC 2086515 - 2085577 - | ribosomal large subunit pseudouridine synthase holB 2087371 - 2086499 - | DNA polymerase III subunit delta' ppa 2087922 - 2087395 - | inorganic pyrophosphatase TERM 1561 2088012 - 2088035 + r 78 -6.8 -4.60746 | TTGTTAAATTAGTCT GCATCATAAT CATC ATTATGCTGC TTTTCATATTTTTCA dksA 2088436 - 2088005 - | DnaK suppressor-like protein xerC 2089408 - 2088470 - | site-specific tyrosine recombinase XerC TERM 1562 2088721 - 2088733 + g 85 -4.8 -5.69023 | opp_overlap 2088721 AATGTCGCCCAAAAA CTGC TGGCT GCAG TTTTTTTCCTCTTTT trmE 2090777 - 2089434 - | tRNA modification GTPase TrmE TERM 1563 2089877 - 2089890 + g 71 -5.3 -4.68994 | opp_overlap 2089877 2089871 CATCAATCATTAAAA TTCTG ATAT CAGAA TTTTTAAATGCTACT TERM 1564 2094340 - 2094322 - g 83 -10.4 -2.99179 | overlap 2094319 AGATAAGTCAAATGA TGCATTAC GCT GTAATGCA AAAGATATATCAGCG OTBS_2150 2090858 - 2095783 + | NAD-glutamate dehydrogenase TERM 1565 2096051 - 2096039 - T 74 -3.3 -5.42131 | TAAGTATAGAAAAAA GCAAC AAT GGTGC GTGTATATAAGATTA TERM 1566 2096091 - 2096073 - T 80 -8.8 -3.72009 | opp_overlap 2096072 2096069 ATAAGATTATTTAAA GCTTGGGG ACA CACCAAGC AGTATTAATTAAGGA TERM 1567 2098561 - 2098614 + T 83 -10.1 -3.70109 | gap 1, opp_overlap 2098561 2098570, overlap 2098570 TAAAGCTATAAAAAA TTGTTAC-AATAGTGGTAATATTATT TGT AATAATATTACCACTATTAGCTATAA TTATTGGATACTATA TERM 1568 2098614 - 2098561 - T 100 -10.1 -5.33866 | gap 1, opp_overlap 2098561 2098570, overlap 2098570 TAAAGCTATAAAAAA TTGTTAC-AATAGTGGTAATATTATT TGT AATAATATTACCACTATTAGCTATAA TTATTGGATACTATA TERM 1569 2098604 - 2098570 - T 100 -17.6 -3.38191 | opp_overlap 2098561 2098570, overlap 2098561 AAAAAATTGTTACAA TAGTGGTAATATTATT TGT AATAATATTACCACTA TTAGCTATAATTATT TERM 1570 2098570 - 2098604 + T 100 -17.6 -3.17382 | opp_overlap 2098570 2098561, overlap 2098561 AAAAAATTGTTACAA TAGTGGTAATATTATT TGT AATAATATTACCACTA TTAGCTATAATTATT secB 2099624 - 2099142 - | protein-export protein dcd 2100233 - 2099667 - | deoxycytidine triphosphate deaminase TERM 1571 2100550 - 2100565 + H 72 -6.2 -4.29432 | TACAGTATATCCTTT TTGCTA TTTA TAGCAA TTTTGCTGAAGTTTA TERM 1572 2101148 - 2101132 - g 73 -8.1 -3.54543 | AGTTACGGTGGTAAA GTAGTAT TGC ATACTAC TACAAAAGCTAAAGG OTBS_2157 2100868 - 2102148 + | hypothetical protein TERM 1573 2102180 - 2102138 - T 100 -19 -4.25104 | opp_overlap 2102138 2102143 TTCTTGGTATTAAAA TTAAATTTTAATGAAGGTAA GTA TCACCTTCATTAAAATTTAA TACTTTGATAAAATA TERM 1574 2102138 - 2102180 + T 100 -16.8 -2.97171 | opp_overlap 2102138, overlap 2102143 TTCTTGGTATTAAAA TTAAATTTTAATGAAGGTAA GTA TCACCTTCATTAAAATTTAA TACTTTGATAAAATA TERM 1575 2102143 - 2102175 + T 100 -12.3 -3.90082 | opp_overlap 2102138, overlap 2102138 GGTATTAAAATTAAA TTTTAATGAAGGTAA GTA TCACCTTCATTAAAA TTTAATACTTTGATA rrf 2102875 - 2102312 - | ribosome recycling factor nuoG 2103155 - 2105194 + | NADH dehydrogenase subunit G TERM 1576 2105421 - 2105442 + G 72 -7.3 -3.85389 | gap 1 TATGCAATTACGTGT TGGGCCTAGT TTG GCT-GGCCCA TTTGGATTGTTACAG nuoH 2105251 - 2106321 + | NADH dehydrogenase I chain H nuoI 2106347 - 2106832 + | NADH dehydrogenase subunit I nuoJ 2106836 - 2107444 + | NADH dehydrogenase subunit J nuoK 2107428 - 2107751 + | NADH dehydrogenase I chain K TERM 1577 2108254 - 2108232 - g 100 -11.4 -5.24129 | opp_overlap 2108217 TTTTGGCATAAAAAA TATGCCGCAA TAA TTGCAGCATA TAAAGCATTTATTGT TERM 1578 2108299 - 2108313 + G 74 -7.2 -4.1523 | opp_overlap 2108308 ACTGTGCATTTCTTT TAGCAA TTA TTGCTA TTATTTATAATTGCA TERM 1579 2108934 - 2108944 + G 71 -5.4 -4.63542 | overlap 2108942 ACATTAGCAATTGTT GGAA TAT TTCC TTTTTCAGGATTCTA nuoL 2107755 - 2109662 + | NADH dehydrogenase I chain L TERM 1580 2110615 - 2110593 - g 84 -3.5 -5.77988 | opp_overlap 2110593 ATAGATATAAAAAAA GCAATTG CTTATTCTT CAATTGC TCATATGGGGTATGT TERM 1581 2111059 - 2111045 - g 93 -10 -4.30014 | opp_overlap 2111045 2111054 TTTATTAAGTGAAAA GGTAGC TGT GCTACC TTTAATAGTAGCTAT TERM 1582 2111045 - 2111059 + G 87 -10 -3.80014 | opp_overlap 2111045, overlap 2111054 TTTATTAAGTGAAAA GGTAGC TGT GCTACC TTTAATAGTAGCTAT nuoM 2109711 - 2111159 + | NADH dehydrogenase subunit M TERM 1583 2112174 - 2112156 - g 83 -10.4 -3.03124 | opp_overlap 2112140 2112151 CTTTAGTTGCTAACA GCTCTAAT GTT ATTAGAGC TGAAATATCATATTT nuoN 2111204 - 2112640 + | NADH dehydrogenase I chain N TERM 1584 2113289 - 2113261 - g 73 -8.4 -3.54771 | opp_overlap 2113268, overlap 2113268 TTTAGAACAGCAGAA TATTAAATGGAT AAATG ATCCATCTAATA ACTCAAATAAGTATC TERM 1585 2113843 - 2113833 - g 81 -3.2 -5.82316 | ATTATTTAAAAAAAA GCGA CTA TCAC TTAATTAAATCCTAT tilS 2112725 - 2114050 + | tRNA(Ile)-lysidine synthetase TERM 1586 2115390 - 2115409 + G 71 -8.6 -2.83012 | AAAGTAACGATTGTG CCTAGAGG ATCT TCTCTAGG TATGGTAATGAGGTT ftsH 2114067 - 2115950 + | ATP-dependent metalloprotease mpg 2115985 - 2116521 + | 3-methyladenine DNA glycosylase OTBS_2170 2116537 - 2116959 + | hypothetical protein rodA 2117129 - 2118256 + | rod shape-determining protein rodA OTBS_2172 2118253 - 2118753 + | hypothetical protein TERM 1587 2118896 - 2118882 - g 70 -4.4 -4.82128 | CTAGTAAATATAAAA TTTTAT CAG ATAAAA ATAGGATTAATATTG TERM 1588 2119109 - 2119098 - g 74 -3 -5.33921 | AAATTAACCAAAAAA TACT TGCT AGTA AAAATCTTTATGAAG pbpA1 2118743 - 2120491 + | penicillin-binding protein ubiD 2122150 - 2120648 - | 3-polyprenyl-4-hydroxybenzoate decarboxylase TERM 1589 2121159 - 2121145 - G 77 -8.6 -3.61517 | ATGCTTCGCCAATAA CAGATG GTT CATCTG GAGGTTTGCCAGTAT OTBS_2175 2122474 - 2122896 + | hypotheticaal protein TERM 1590 2123519 - 2123538 + T 84 -9.4 -3.81146 | opp_overlap 2123523, overlap 2123523 CCTTGGAATTGACAG CAAAGCTT TGTA AAGCTTTG TTCTTAGTTGCGGAA TERM 1591 2123716 - 2123706 - T 72 -2.6 -5.42164 | TAGAAATAAGAAAAA TTTT AAT AAAA CTGCCGCACTATTTA TERM 1592 2124019 - 2124033 + T 75 -5.7 -4.6902 | opp_overlap 2124010 2124019 AAAATACGTGAATAA GAGGT ATTAC ACCTC TTTTTACAATTATAG ank1u9 2126086 - 2124560 - | ankyrin repeat-containing protein TERM 1593 2124886 - 2124941 + g 100 -14 -4.11692 | gap 1, opp_overlap 2124900 2124921, overlap 2124891 GATGATTAGCATATT TCAT-TTGTATATAACTTATATTATTT GGT AAATAATATAAGTTATATACATTGTGA TTTTCGACATAGATA TERM 1594 2124891 - 2124935 + g 100 -20.7 -3.68359 | opp_overlap 2124900 2124921, overlap 2124886 TTAGCATATTTCATT TGTATATAACTTATATTATTT GGT AAATAATATAAGTTATATACA TTGTGATTTTCGACA TERM 1595 2124926 - 2124900 - G 87 -11.2 -3.49475 | opp_overlap 2124891 2124886, overlap 2124921 TTCATTTGTATATAA CTTATATTATTT GGT AAATAATATAAG TTATATACATTGTGA TERM 1596 2125639 - 2125624 - G 71 -7.6 -3.39803 | TATGCATACCTATAA GAAGCT TTAC AGCTTC TATACGATCAAAGCA TERM 1597 2126045 - 2126024 - G 72 -6 -4.4959 | overlap 2126019 TCTAATTAACCAAAA GTTTATAC TATTGC GTATAAAC CTATAACAATGTAAT OTBS_2179 2126734 - 2126471 - | hypothetical protein