TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.683424 %AT, 1455538 nt, 7779 terms. Intergenic: 0.72494 %AT, H2T: 384003 nt, 2514 terms; T2T: 130900 nt, 1594 terms; H2H: 154645 nt, 2179 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|189182907|ref|NC_010793.1| Orientia tsutsugamushi str. Ikeda, complete genome (length 2008987) OTT_0001 4977 - 457 - | hypothetical protein TERM 1 1475 - 1491 + g 82 -9.5 -3.68827 | AATCTTGTTTTGCCA TCACCTT CAT AAGGTGA TTTAACTAATGCATC TERM 2 4905 - 4922 + g 84 -9.9 -3.38178 | opp_overlap 4904 ATGTACAAATCGAAG CTGTTGC ATTA GCAACAG TTATAAAATTAATTA virB4 7430 - 4977 - | type IV secretion system protein VirB4 TERM 3 5786 - 5764 - G 76 -6.4 -4.67038 | GCCTTAAAATTAAAA TCTTTGATAA TTT TAATCAAAGA ACGCGATTCAGGTGG TERM 4 6476 - 6503 + g 81 -10 -3.1247 | opp_overlap 6476 6477, overlap 6479 TATCAGAATTCACAA TTGGCTCTATTC CTTT GAATAGAGCTAG TTCACTGTCACGACT TERM 5 6502 - 6477 - G 72 -9.1 -2.66979 | opp_overlap 6476 6479, overlap 6476 ATCAGAATTCACAAT TGGCTCTATTC CTTT GAATAGAGCTA GTTCACTGTCACGAC TERM 6 6479 - 6500 + g 87 -11.7 -2.77182 | opp_overlap 6477 6476, overlap 6476 CAGAATTCACAATTG GCTCTATTC CTTT GAATAGAGC TAGTTCACTGTCACG TERM 7 7530 - 7518 - H 83 -4.9 -5.72053 | GAATTAAATAAAAAA TGTAA ATA TTACA GCAATGTTACTACGT gap 7705 - 8721 + | glyceraldehyde 3-phosphate dehydrogenase pgk 8802 - 10022 + | phosphoglycerate kinase OTT_0005 10036 - 10329 + | hypothetical protein TERM 8 10551 - 10528 - g 82 -9.6 -3.69405 | overlap 10529 TAGAAAAAATATGAA TGCAGCTCAA TGCA TTGAGCTGCT AATGCCATGCATTCA TERM 9 10550 - 10529 - g 100 -13.1 -2.80016 | overlap 10528 AGAAAAAATATGAAT GCAGCTCAA TGCA TTGAGCTGC TAATGCCATGCATTC TERM 10 11119 - 11106 - g 71 -5.3 -4.60977 | opp_overlap 11106 AAGACAAGCATAAAA CTGAT CAAA ATCAG ATTTCAAATGATACA proS 10343 - 11644 + | prolyl-tRNA synthetase clpX 13125 - 11872 - | ATP-dependent Clp protease ATP-binding subunit TERM 11 12143 - 12157 + g 70 -4.3 -4.91084 | overlap 12150 AAAAGTTTTTGATAT TGCTT AACTA AAGCA TTTTTAGGTTTTGTT TERM 12 13678 - 13663 - g 74 -6.2 -4.4648 | ATTCTTACTAGAAAA TACAGT TATC ACTGTA GAAACTTATAAAGAT efp 13331 - 13900 + | elongation factor EF-P suhB 13897 - 14682 + | extragenic suppressor protein SuhB OTT_0010 14675 - 15403 + | putative glycoprotein endopeptidase TERM 13 15427 - 15392 - f 93 -12 -2.93357 | opp_overlap 15392 15394, overlap 15389 15394 AAGCATTGGAAACTA GAGTATAGGTAAGCTC TCTC GCACTCACCTATACTC TCTTAAGGCTTATTT TERM 14 15425 - 15394 - f 73 -8.8 -3.01497 | opp_overlap 15394 15392, overlap 15392 15389 GCATTGGAAACTAGA GTATAGGTAAGCTC TCTC GCACTCACCTATAC TCTCTTAAGGCTTAT OTT_0011 15549 - 16271 + | transposase TERM 15 16838 - 16824 - g 86 -7.2 -4.91977 | opp_overlap 16823 16826 CATGAAAATATAAAA TACTTG CAA CAAGTA ATTGATACAGAACAG TERM 16 17512 - 17497 - g 82 -2.4 -5.98675 | TAGAAAAACAAAAAA GCCAGC AAGA GCAAGC AATGTCACGAAAAGT prfA 16647 - 17726 + | peptide chain release factor RF-1 OTT_0013 17930 - 18949 + | hypothetical protein era 18946 - 19866 + | GTP-binding protein Era olmA 20619 - 20254 - | hypothetical protein homologous to outer membrane lipoprotein rpmF 20716 - 20922 + | 50S ribosomal protein L32 TERM 17 20961 - 20939 - T 78 -9.4 -3.1241 | overlap 20937 ATGATATTTAAGATA TTTGATTATA AGT TATAATCAAA TGAAAGTTATAACAA cox11 21732 - 21205 - | cytochrome c oxidase assembly protein cox11 yqiX 22157 - 22960 + | amino acid ABC transporter substrate binding protein TERM 18 23597 - 23587 - g 74 -4 -5.24416 | CAAGCAGAAGAAAAA TTGT ACT ACAA AGAAAAATAATATTG TERM 19 23652 - 23640 - g 81 -9.1 -3.86822 | TAAGGGCTGGAGAAA TGCCG TGC CGGCA TGAAGTAATGTTTAT dapB 22967 - 23818 + | dihydrodipicolinate reductase OTT_0020 23882 - 24373 + | hypothetical protein TERM 20 25053 - 25063 + G 74 -4 -5.28826 | opp_overlap 25053 CTGATAAGGAGTCAA TTGT TAA ACAA TTTTTTGTCAAATTT TERM 21 26071 - 26049 - g 76 -6.4 -4.72007 | opp_overlap 26049 26048 TGCTAGCAAAACAAA TTGCACATTA TGT TAATCTGCAA ATTTCATCTAAAAGA OTT_0021 24386 - 27853 + | putative ATP-dependent helicase/nuclease TERM 22 28768 - 28758 - g 70 -4 -4.96848 | overlap 28761 CGTTTTATAGAAAAA GTAT AGA ATAC CAAATTCTAGCTTTA TERM 23 28775 - 28806 + G 75 -8.2 -3.73402 | gap 1, opp_overlap 28761 28774 28773 ATAGAATACCAAATT CTAGCTTTATCTACT AGT AGTAGC-AAAGCTAG TTTAGTGACAACTAT gltP 28031 - 29230 + | proton/sodium-glutamate symport protein TERM 24 29236 - 29261 + F 72 -6.3 -4.38843 | gap 1, opp_overlap 29236 TTATTCTTAATAAAA CATTAGC-CTAT TAT ATAGTGCTGATG TTTGTTGATATTTTG pcnB 29283 - 30491 + | poly(A) polymerase znuA 30488 - 31384 + | zinc/manganese ABC transporter substrate binding protein TERM 25 31864 - 31884 + F 89 -7.7 -5.06116 | TTAGTTAGATGTTTA GTTATATTG GTA CAATGTAAC TTTTATTATTATTTT TERM 26 32089 - 32099 + G 71 -5.4 -4.55721 | ATATAAATATTGTAG GCTT TGG AAGC TTTTGTGTAAGATTT hupA 31920 - 32228 + | DNA-binding protein HU TERM 27 32309 - 32334 + F 71 -7.7 -3.67112 | opp_overlap 32309 CAGGAATTGAAATGA TAGTTAGGTAA TAGT TTGCCTAGCTA TTATTAAGATATACT OTT_0026 32411 - 33286 + | hypothetical protein ksgA 33415 - 34236 + | dimethyladenosine transferase TERM 28 34586 - 34561 - g 77 -8.5 -3.59867 | gap 1, opp_overlap 34561 34564 34573, overlap 34557 34564 34573 GAAAAAATGAATGAA GAAGCTTTA-CA ACT TGCTAAAGCTTC TTTGCTAGATTTAGG TERM 29 34561 - 34586 + G 79 -8.5 -3.82097 | gap 1, opp_overlap 34561 34557 34564 34573, overlap 34564 34573 GAAAAAATGAATGAA GAAGCTTTA-CA ACT TGCTAAAGCTTC TTTGCTAGATTTAGG OTT_0028 34297 - 35646 + | DNA recombination protein RmuC homolog TERM 30 36047 - 36066 + G 71 -2.1 -5.32396 | opp_overlap 36037 36047 AGAATGCTGATAGTA TTAGCTG GGCCAG CAGCGAA TTTTATTTTTGCTAT OTT_0029 35756 - 36817 + | putative membrane-associated Zn-dependent protease 1 omp1 36830 - 39148 + | outer membrane protein Omp1 TERM 31 39261 - 39288 + G 80 -9.2 -3.60818 | gap 1 TTAGTAGATTTTTAT GCTGACTGGTGTG GTC CATGCC-GTCAGC TTTCACCAATTTTAG trxA 39171 - 39497 + | thioredoxin TERM 32 39479 - 39518 + F 78 -9.8 -2.71924 | opp_overlap 39488 39491, overlap 39484 39491 GCAAGATATTATAGA TTGGATTAATAATTATTA AAGC TAATAATTATTAATTTAA CTTTGCAAAGGAGTA TERM 33 39484 - 39513 + F 86 -9.7 -3.84451 | opp_overlap 39488 39491, overlap 39479 39491 ATATTATAGATTGGA TTAATAATTATTA AAGC TAATAATTATTAA TTTAACTTTGCAAAG rpmJ 40730 - 40855 + | 50S ribosomal protein L36 OTT_0033 42104 - 41919 - | transposase TERM 34 42104 - 42122 + r 73 -3.2 -5.38951 | TTTTAGTTATAGTCA TTTACAGT ATT ATTGTGAA TTTTTTGTATACCTT OTT_0034 42635 - 42282 - | transposase TERM 35 42923 - 42894 - H 100 -11.1 -4.91285 | opp_overlap 42898 42901, overlap 42898 ATTAAGACAAGAAAA GAAATAATAATTT TATA AAATTATTATTTC TTAAGGATTGAAAGA TERM 36 42898 - 42919 + H 70 -6.1 -4.183 | opp_overlap 42894 42898, overlap 42901 AGACAAGAAAAGAAA TAATAATTT TATA AAATTATTA TTTCTTAAGGATTGA TERM 37 42919 - 42898 - H 80 -6.1 -4.94168 | opp_overlap 42898 42901, overlap 42894 AGACAAGAAAAGAAA TAATAATTT TATA AAATTATTA TTTCTTAAGGATTGA TERM 38 43261 - 43206 - H 100 -8.6 -5.30686 | gap 1, opp_overlap 43217, overlap 43213 AAGATCTACAAAAAA GCTACAACTTGTTTAGCAGA-ACTAAA TTT CTCAGTATCTGCTAAACAAGTAAGAAC TATTATCATTGCAGA TERM 39 43254 - 43213 - H 100 -14.1 -3.60344 | gap 1, opp_overlap 43217, overlap 43206 ACAAAAAAGCTACAA CTTGTTTAGCAGA-ACTAAA TTT CTCAGTATCTGCTAAACAAG TAAGAACTATTATCA OTT_0035 43563 - 43829 + | putative conjugative transfer protein TraD OTT_0037 45455 - 44733 - | putative conjugative transfer protein TraC OTT_0036 44402 - 44929 + | ankyrin repeat-containing protein 01_01 OTT_0038 45885 - 45703 - | hypothetical protein OTT_0039 46414 - 46097 - | putative conjugative transfer protein TraE OTT_0040 46737 - 46414 - | hypothetical protein OTT_0041 47690 - 46875 - | putative integrase TERM 40 47478 - 47490 + g 74 -6.3 -4.45115 | overlap 47469 47475 TTTATGCTGCTCTAT TCCTA GAG TAGGA TTGTTTTCTATTAAT TERM 41 47671 - 47691 + g 79 -8.3 -4.05991 | opp_overlap 47667 47665 CCATAATTATATATT CTTGCAGCA TCT TTCTGCAAG TTTATAGTATATATT TERM 42 48501 - 48549 + H 100 -17.2 -3.41745 | opp_overlap 48515 48517, overlap 48502 GATCTGCCTTTGCAC CTTTACCTATAGTACATCTTAT TGATT ATAAGATGTGCTATAGGTAAAA TTGGTCTTCTAAGGC TERM 43 48502 - 48548 + H 100 -20.7 -2.64726 | opp_overlap 48515 48517, overlap 48501 ATCTGCCTTTGCACC TTTACCTATAGTACATCTTAT TGATT ATAAGATGTGCTATAGGTAAA ATTGGTCTTCTAAGG TERM 44 49128 - 49108 - g 100 -11.3 -5.35222 | AAAACTTATAAAAAA TTTTCAGTG TTT CACTGAAAA GGAAAAAAAGAAGAA TERM 45 49156 - 49138 - g 79 -2.4 -5.79588 | TGAAAAGGAAAAAAA GAAGAAAA AAT TGTCCTTC TACAACAAAAAAATT TERM 46 49211 - 49192 - g 89 -10.8 -3.65581 | opp_overlap 49200 ATCAATTTGCAAGAA TTTGCAGG TGAA CCTGCAAA AAATTGCAGCTACAT TERM 47 49605 - 49591 - g 74 -8.6 -3.3375 | opp_overlap 49588 49584, overlap 49581 49589 ACTAACACCAGAAGA TGCAGT TAT ACTGCA ACGTATGTCTAGTAG TERM 48 49994 - 49972 - g 74 -5.7 -4.58283 | TAAGTTGCTTAAAAA TATCACACT AACAG AATGTGATA GATCAAAGATATTAC OTT_0042 49073 - 50392 + | hypothetical protein OTT_0043 50401 - 50523 + | replicative DNA helicase lacA 52014 - 51565 - | ribose-5-phosphate isomerase OTT_0045 52847 - 52308 - | hypothetical protein OTT_0046 53334 - 53182 - | putative conjugative transfer protein TraD OTT_0047 54267 - 54431 + | putative conjugative transfer protein TraE OTT_0048 54600 - 54710 + | hypothetical protein TERM 49 54815 - 54790 - T 86 -9.1 -4.21974 | opp_overlap 54790 TCAGTATGGAACAAA CCATCTACAAC CAAT GTTACAGATGG CTTTGACACTTGCAC OTT_0049 55864 - 54830 - | ankyrin repeat-containing protein 02 TERM 50 55585 - 55598 + g 71 -6.7 -4.00066 | TAGAATCAGCTCCAT GCTTC AATA GAAGC TTTATAAGTTGTACA OTT_0050 56136 - 56423 + | putative conjugative transfer protein TraU TERM 51 56513 - 56563 + T 100 -13.3 -2.84098 | opp_overlap 56513 56517, overlap 56517 56520 56523 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 52 56563 - 56513 - T 100 -13.3 -4.84262 | opp_overlap 56513 56517 56520 56523, overlap 56517 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 53 56517 - 56559 + T 80 -8.3 -4.10331 | opp_overlap 56513 56517, overlap 56513 56520 56523 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 54 56559 - 56517 - T 91 -8.3 -4.91657 | opp_overlap 56517 56513 56520 56523, overlap 56513 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0051 57519 - 56557 - | transposase TERM 55 56919 - 56894 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 56894 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 56 57065 - 57081 + g 73 -8.1 -3.54574 | overlap 57062 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0052 57736 - 58197 + | putative transposase TERM 57 58219 - 58185 - T 79 -6.7 -4.67173 | opp_overlap 58186, overlap 58182 58187 TAATTTAAAAAATAA CATAGAGTATTAATT TTTCG AATTAATACTCTACT AATTTAAGTTTTTTG TERM 58 58186 - 58218 + T 73 -8.7 -3.04715 | opp_overlap 58185 58182 58187 AATTTAAAAAATAAC ATAGAGTATTAATTT TTC GAATTAATACTCTAC TAATTTAAGTTTTTT TERM 59 58217 - 58187 - T 95 -11.5 -3.92369 | opp_overlap 58186, overlap 58185 58182 ATTTAAAAAATAACA TAGAGTATTAATT TTTCG AATTAATACTCTA CTAATTTAAGTTTTT OTT_0053 59799 - 58207 - | putative conjugative transfer protein TraD TERM 60 59410 - 59433 + g 73 -8.2 -3.38674 | overlap 59409 CTTTACTAATGGCAA GCCTCCAAAA CAGA TTTTTGAGGC CTTTTTAGCGCTTTT OTT_0054 60857 - 59964 - | putative conjugative transfer protein TraH OTT_0055 61018 - 60854 - | putative conjugative transfer protein TraF OTT_0056 61214 - 61029 - | putative conjugative transfer protein TraN OTT_0057 61649 - 61251 - | putative conjugative transfer protein TraN OTT_0058 61962 - 61696 - | putative conjugative transfer protein TraU OTT_0059 62694 - 62401 - | hypothetical protein OTT_0060 63145 - 62759 - | putative integrase TERM 61 63872 - 63856 - g 73 -8.1 -3.54574 | overlap 63865 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 62 64018 - 64043 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 64018 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_0061 63418 - 64380 + | transposase TERM 63 64374 - 64424 + T 100 -13.3 -4.84262 | opp_overlap 64374 64378 64381 64384, overlap 64378 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 64 64424 - 64374 - T 100 -13.3 -2.84098 | opp_overlap 64374 64378, overlap 64378 64381 64384 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 65 64378 - 64420 + T 91 -8.3 -4.91657 | opp_overlap 64374 64378 64381 64384, overlap 64374 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 66 64420 - 64378 - T 80 -8.3 -4.10331 | opp_overlap 64378 64374, overlap 64374 64381 64384 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_0062 64986 - 64396 - | putative integrase OTT_0063 65375 - 65653 + | hypothetical protein OTT_0064 66679 - 66305 - | transposase TERM 67 66515 - 66531 + g 71 -2.3 -5.38951 | overlap 66507 66512 TTTTTTCTTTTGTAA TTCAAAA TTA TTGTGAA TTTTTTGTATACCTT OTT_0065 66978 - 66691 - | transposase OTT_0066 67391 - 67179 - | putative conjugative transfer protein TraI TERM 68 68049 - 68033 - R 74 -2.3 -5.64274 | TTACTGAGAAAAAAA TGCTTTA AGC TAAATCA AACAGAATGAAATAT TERM 69 68118 - 68095 - R 70 -5.4 -4.57073 | opp_overlap 68095 68116, overlap 68080 TACCTTTTTCAAAAA GTATATAACA TAAC TGTTTTATAC TGAGTTAGTATACTT TERM 70 68142 - 68158 + r 74 -2.3 -5.56568 | overlap 68133 68143 TATACTTAAAGTAGC TTACTTA ATT TAAGTAC TTTTTTTGCTGATGT TERM 71 68670 - 68641 - R 73 -8.9 -2.76261 | opp_overlap 68643 68645, overlap 68640 68643 TGCTAAGTTTCAAAG TATAGTATAACTT CAAA AAATTATACTATA TTGCACACTTAATGT OTT_0067 70705 - 68777 - | hypothetical protein TERM 72 69672 - 69688 + g 71 -8.1 -3.2082 | opp_overlap 69670, overlap 69671 69682 GCACGGATTAAAGCT GGATATA CTT TATATCC TATACTTTTTAGTAT OTT_0068 72649 - 70751 - | hypothetical protein TERM 73 70806 - 70822 + g 71 -2.3 -5.4492 | GATTCAAAGTTTTGT TTAATAG TGT CTTTTAA TTTTTTGTATATATC TERM 74 73420 - 73446 + G 83 -10.4 -3.08812 | opp_overlap 73424 73443, overlap 73417 73424 TTTTTTTATTGATAT TAAATGTTGATA ATT TATCAACATTTG CTTTATTAAGCACAC TERM 75 73424 - 73442 + G 88 -9 -4.21141 | opp_overlap 73424, overlap 73417 73420 TTTATTGATATTAAA TGTTGATA ATT TATCAACA TTTGCTTTATTAAGC TERM 76 73442 - 73424 - g 81 -9 -3.84825 | opp_overlap 73417 73424 73420 TTTATTGATATTAAA TGTTGATA ATT TATCAACA TTTGCTTTATTAAGC OTT_0069 72798 - 73718 + | hypothetical protein radA 75111 - 73756 - | DNA repair protein RadA homolog OTT_0071 75680 - 75111 - | hypothetical protein fabZ 76184 - 75699 - | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase TERM 77 76945 - 76927 - g 74 -6.1 -4.40804 | opp_overlap 76917 76944, overlap 76929 76944 GATGATGTTATAAAA CATATTG GCCAA CAATATG CCAATAAGATTAGCA OTT_0073 76423 - 77145 + | hypothetical protein OTT_0074 77610 - 77140 - | hypothetical protein TERM 78 77926 - 77947 + r 89 -7.5 -5.05782 | opp_overlap 77926 CATTAACGAACTAAA GTATTAAAT ATAT ATTTAATAC TTTTTTAAGCTGGCT TERM 79 77947 - 77926 - R 75 -7.5 -4.01419 | opp_overlap 77926 CATTAACGAACTAAA GTATTAAAT ATAT ATTTAATAC TTTTTTAAGCTGGCT xerD 78870 - 77941 - | integrase/recombinase XerD TERM 80 79264 - 79248 - g 74 -2.3 -5.52986 | opp_overlap 79250, overlap 79250 ACTTTATTAAAAAAA TATATTG TAG CAATATT ATGCAGTATATTTCT TERM 81 79645 - 79629 - g 72 -5.1 -4.90869 | ACTATTAAGCAAAAA TCCTATG CTG CAAAGGA GAAATTTTATAATGA TERM 82 80529 - 80508 - g 88 -6.7 -5.19275 | ATGTATAAAATAAAA CAGTTAACT AATA AATTAACTG CTAAATCATTAAATT tolC 79227 - 80600 + | outer membrane protein TolC precursor OTT_0077 80645 - 81217 + | hypothetical protein OTT_0078 81219 - 83075 + | hypothetical protein TERM 83 83243 - 83230 - g 72 -2.5 -5.34309 | AGCATTAAAGAAAAA TATAT GGTC ATATA AAGCTATTAATATTA trmD 83123 - 83878 + | tRNA (guanine-N1)-methyltransferase TERM 84 84204 - 84192 - g 70 -6.3 -4.22375 | ATATTATTTAAGAAA TCTAC AAG GTAGA AAAGCTAAAATTAGA rplS 83875 - 84249 + | 50S ribosomal protein L19 TERM 85 84239 - 84227 - f 79 -4.9 -5.43487 | overlap 84220 AAATTAGAGAAAAAA TCTTT TCA AAAGA TAACCAATAAAGAAT recD 84276 - 86471 + | exodeoxyribonuclease V alpha subunit ilvE 87475 - 88377 + | branched-chain amino acid aminotransferase dapA 88358 - 89254 + | dihydrodipicolinate synthase smpB 89257 - 89718 + | small protein B homolog sppA 89738 - 90646 + | protease IV TERM 86 90706 - 90679 - g 79 -10 -2.88243 | gap 1, opp_overlap 90681, overlap 90676 90681 GCGATAAGAATATTA CAGCTACAGCCTT AGT AAGGCC-TAGCTG GTTAAGAGTTAAAGC lipA 90657 - 91565 + | lipoic acid synthetase OTT_0087 91586 - 92032 + | hypothetical protein purC 92016 - 92750 + | phosphoribosylaminoimidazole-succinocarboxamide synthase OTT_0089 93230 - 93472 + | transposase OTT_0090 93889 - 94233 + | putative integrase OTT_0091 94443 - 94784 + | putative integrase OTT_0092 95455 - 95604 + | hypothetical protein OTT_0093 95604 - 95747 + | putative conjugative transfer protein TraE OTT_0094 95834 - 96157 + | putative conjugative transfer protein TraE OTT_0095 96154 - 96456 + | hypothetical protein OTT_0096 96456 - 96560 + | hypothetical protein OTT_0097 96672 - 96899 + | putative conjugative transfer protein TraB OTT_0098 96862 - 97131 + | putative conjugative transfer protein TraB OTT_0099 97131 - 97460 + | hypothetical protein TERM 87 99338 - 99352 + GF 81 -10 -3.14013 | opp_overlap 99331, overlap 99337 99347 AAACAGATCATCTAC GCTCTG TAC CAGAGC TGTTAGCTGTGATTG OTT_0100 97372 - 99453 + | putative conjugative transfer protein TraC OTT_0101 99652 - 99930 + | putative conjugative transfer protein TraC TERM 88 100531 - 100521 - g 71 -6.8 -3.97108 | AAGTTTAAAATACAA GCTG TGC CAGC CATAATAGAGCAAGA OTT_0102 99927 - 100586 + | putative conjugative transfer protein TraW OTT_0103 100672 - 100875 + | hypothetical protein OTT_0104 100876 - 101853 + | putative conjugative transfer protein TraU TERM 89 102602 - 102586 - g 73 -8.1 -3.54574 | overlap 102595 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 90 102748 - 102773 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 102748 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_0105 102142 - 103110 + | transposase TERM 91 103104 - 103154 + F 100 -13.3 -4.84262 | opp_overlap 103104 103108 103111 103114, overlap 103108 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 92 103154 - 103104 - f 100 -13.3 -2.84098 | opp_overlap 103104 103108, overlap 103108 103111 103114 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 93 103108 - 103150 + F 91 -8.3 -4.91657 | opp_overlap 103104 103108 103111 103114, overlap 103104 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 94 103150 - 103108 - f 80 -8.3 -4.10331 | opp_overlap 103108 103104, overlap 103104 103111 103114 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 95 103392 - 103403 + G 72 -5.8 -4.41422 | GTTTGCTTCTCTTTC CTCG CAAA CGAG TTATTTTGTATCTAA OTT_0106 103375 - 103818 + | putative conjugative transfer protein TraG OTT_0107 104006 - 104392 + | TPR repeat-containing protein 01_01 OTT_0108 104424 - 104681 + | TPR repeat-containing protein 01_02 OTT_0109 104687 - 105031 + | putative conjugative transfer protein TraD TERM 96 105197 - 105187 - g 100 -6.8 -6.0427 | AGGATACAAAAAAAA TGGC CTA GCCA AAATGCTAAAAAGCG OTT_0110 105092 - 105421 + | putative conjugative transfer protein TraD TERM 97 108398 - 108367 - g 74 -6.2 -4.46493 | CGAAATACATGAAAA TATTAAAAATAACA GTTT TATCATTTTTAATA AAGAACTCAATCATA OTT_0111 106106 - 108577 + | hypothetical protein TERM 98 108907 - 108923 + F 70 -2.3 -5.38951 | overlap 108904 TTTTTTCTTTGGTAA TTCAAAA TTA TTGTGAA TTTTTTGTATACCTT OTT_0112 109258 - 110124 + | transposase OTT_0113 110125 - 110466 + | transposase TERM 99 110584 - 110568 - gf 71 -2.3 -5.38951 | overlap 110575 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0114 110396 - 110794 + | transposase OTT_0115 111173 - 112264 + | putative conjugative transfer protein TraD TERM 100 112254 - 112284 + T 87 -9.3 -3.92369 | opp_overlap 112253, overlap 112252 112256 AAAAACTTAAATTAG TGGAGTATTAATT CGAAA AATTAATACTCTA TGTTATTTTTTAAAT TERM 101 112256 - 112282 + T 84 -9.7 -3.52788 | opp_overlap 112253, overlap 112254 112252 AAACTTAAATTAGTG GAGTATTAATT CGAAA AATTAATACTC TATGTTATTTTTTAA OTT_0116 113257 - 112274 - | putative transposase TERM 102 112906 - 112932 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTGTAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT OTT_0117 114379 - 113309 - | putative conjugative transfer protein TraI TERM 103 114634 - 114654 + r 74 -6.2 -4.55491 | TTGCAAGCATCACTG TGAGCTGT TATGT ATAGCTCA TTTTGTAATTCGCTC OTT_0118 116458 - 114710 - | putative conjugative transfer protein TraA TERM 104 115101 - 115131 + g 82 -7.7 -4.61162 | overlap 115094 115092 GTTTTTCCTTCTGCT GACAGAATGGTTA CATCA TAATCATACTGTC TTTGTTCTTTGATGT OTT_0119 116958 - 116500 - | putative conjugative transfer protein TraA OTT_0120 117167 - 117622 + | putative conjugative transfer protein TraD OTT_0121 117946 - 118230 + | TPR repeat-containing protein 02_01 OTT_0122 118853 - 118734 - | transposase TERM 105 119991 - 120012 + G 78 -2.3 -5.8187 | CTACCATAATATCAA TACACTAAA ATAT TATGGTGTA TTTTTTTATTGCATA OTT_0123 119302 - 122739 + | sensor histidine kinase/response regulator/transporter hybrid protein OTT_0124 123773 - 123417 - | transposase OTT_0125 124847 - 123909 - | hypothetical protein TERM 106 124976 - 124947 - R 74 -8.7 -3.30214 | opp_overlap 124955 AATTCACTACATTAA CCACCTATTAAAC TTTA GTTTATTAGGTAG CATAAAGCTCACAGT OTT_0126 125556 - 124969 - | RelA/SpoT-related protein OTT_0127 126092 - 125598 - | hypothetical protein OTT_0128 127049 - 126111 - | hypothetical protein OTT_0129 127545 - 127072 - | hypothetical protein OTT_0130 127868 - 127587 - | hypothetical protein TERM 107 127954 - 127920 - R 88 -9.4 -4.39571 | opp_overlap 127919 127922, overlap 127922 127926 TTTAGAAATTTAAAA TAGCAAGCTTAGCTAA CAA TTAGCTAAGCTGACTG GTATATCACATATGG TERM 108 127952 - 127922 - R 95 -12 -3.79633 | opp_overlap 127919 127922, overlap 127920 127926 TAGAAATTTAAAATA GCAAGCTTAGCTAA CAA TTAGCTAAGCTGAC TGGTATATCACATAT TERM 109 127922 - 127952 + r 78 -9.8 -2.69977 | opp_overlap 127922 127920 127926, overlap 127919 TAGAAATTTAAAATA GCAAGCTTAGCTAA CAA TTAGCTAAGCTGAC TGGTATATCACATAT TERM 110 127948 - 127926 - R 100 -13.6 -3.55453 | opp_overlap 127922 127919, overlap 127922 127920 AATTTAAAATAGCAA GCTTAGCTAA CAA TTAGCTAAGC TGACTGGTATATCAC OTT_0131 128287 - 127997 - | hypothetical protein OTT_0132 128814 - 128515 - | hypothetical protein OTT_0133 128798 - 129937 + | reverse transcriptase OTT_0134 130545 - 130360 - | putative conjugative transfer protein TraN OTT_0135 130980 - 130582 - | putative conjugative transfer protein TraN OTT_0136 131971 - 131027 - | putative conjugative transfer protein TraU OTT_0137 132623 - 132009 - | putative conjugative transfer protein TraW TERM 111 132064 - 132074 + g 71 -6.8 -3.97108 | TGTTGTTCTATTATG GCTG GCA CAGC TTGTATTTTAAACTT OTT_0138 134014 - 132923 - | hypothetical protein OTT_0139 136215 - 134167 - | putative conjugative transfer protein TraC TERM 112 134759 - 134745 - GR 81 -10 -3.14013 | overlap 134734 134743 CAATCACAGCTAACA GCTCTG GTA CAGAGC GTAGATCATCAGTTT OTT_0140 136453 - 136124 - | hypothetical protein OTT_0141 136635 - 136453 - | putative conjugative transfer protein TraB OTT_0142 136982 - 136665 - | putative conjugative transfer protein TraE OTT_0143 137131 - 136982 - | hypothetical protein OTT_0144 138764 - 137625 - | reverse transcriptase OTT_0145 138748 - 139047 + | hypothetical protein OTT_0146 139367 - 139624 + | hypothetical protein OTT_0147 140514 - 140149 - | transposase TERM 113 140336 - 140355 + g 80 -7.2 -4.6038 | gap 1, opp_overlap 140336 ATTTTCGCATTATAA CCTT-TGGC TGG GCCATAAGG TTTTGCTTTAATATC OTT_0148 140645 - 141232 + | RelA/SpoT-related protein TERM 114 141225 - 141254 + F 74 -8.7 -3.30214 | opp_overlap 141233 ACTGTGAGCTTTATG CTACCTAATAAAC TAAA GTTTAATAGGTGG TTAATGTAGTGAATT OTT_0149 141354 - 141914 + | hypothetical protein OTT_0150 142424 - 142209 - | hypothetical protein OTT_0151 143614 - 142835 - | hypothetical protein OTT_0152 144046 - 143834 - | transposase OTT_0153 144901 - 144257 - | ankyrin repeat-containing protein 03_01 TERM 115 144796 - 144759 - G 82 -9.5 -3.63627 | gap 1, opp_overlap 144765, overlap 144760 144765 TTCTTATATTTCAAA GCAAAATATAAAG-CTGT AGT ACAGTCTTTATATTTTGA ATTGACAAGTGTACT TERM 116 144795 - 144760 - G 95 -13 -2.77962 | gap 1, opp_overlap 144765, overlap 144759 144765 TCTTATATTTCAAAG CAAAATATAAAG-CTGT AGT ACAGTCTTTATATTTTG AATTGACAAGTGTAC TERM 117 144790 - 144765 - G 80 -7.1 -4.55798 | gap 1, opp_overlap 144765, overlap 144760 144759 TATTTCAAAGCAAAA TATAAAG-CTGT AGT ACAGTCTTTATA TTTTGAATTGACAAG TERM 118 144765 - 144790 + g 76 -7.1 -4.27316 | gap 1, opp_overlap 144765 144760 144759 TATTTCAAAGCAAAA TATAAAG-CTGT AGT ACAGTCTTTATA TTTTGAATTGACAAG OTT_0154 145490 - 144939 - | RelA/SpoT-related protein OTT_0155 146059 - 145727 - | replicative DNA helicase TERM 119 145973 - 146003 + g 95 -8.5 -4.98522 | gap 1, opp_overlap 145973 GTCTTGTTCAATTGA GCCTGATTCTTTCA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT OTT_0156 146965 - 146123 - | hypothetical protein TERM 120 146319 - 146335 + g 72 -7.3 -3.80858 | opp_overlap 146315 146319 ACTTTGAACAATATA GAGTTAG ATC CTAGCTC TTTACTAAGTTCTGA TERM 121 146898 - 146912 + g 74 -8.6 -3.25459 | opp_overlap 146895 146891, overlap 146896 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGCGTTAGT OTT_0157 147852 - 147094 - | hypothetical protein TERM 122 147290 - 147309 + g 89 -10.8 -3.65581 | opp_overlap 147276 ATGTAGCTGCAATTT TTTGCAGG TTCA CCTGCAAA TTCTTGCAAATTGAT TERM 123 147345 - 147363 + g 87 -2.4 -6.4275 | AATTTTTTTGTTGTA GAAGGACA ATT TTTTCTTC TTTTTTTTCTTTTTC TERM 124 147374 - 147394 + g 95 -9.1 -5.08011 | TCTTCTTTTTTTTCT TTTTCAGTG AAA CGCTGAAAA TTTTTTAGAAGTTTT TERM 125 147427 - 147439 + g 93 -6.3 -5.68489 | ACATGGAACATTACG CAACT TAA AGTTG TTTTTTATTATTGTC TERM 126 147733 - 147714 - G 84 -6.4 -5.15117 | opp_overlap 147714 TAAAACGGTAAAAAA CAGTTGCA TTAT TGCTACTG TTATTATTAGTAATT OTT_0158 147941 - 148498 + | transposase OTT_0159 149576 - 149680 + | transposase TERM 127 149856 - 149840 - g 71 -2.3 -5.38951 | overlap 149847 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0160 149692 - 149934 + | transposase TERM 128 151305 - 151256 - g 100 -16.3 -3.69092 | opp_overlap 151267 151270, overlap 151257 151270 AATACTAAGCTTAAA GTCTTTAATAATAACATTATCTC TACT GAGATAATGTTATTATTAAAAAT AAATGATTTTGTTCA TERM 129 151304 - 151257 - g 100 -19.8 -2.80732 | opp_overlap 151267 151270, overlap 151256 151270 ATACTAAGCTTAAAG TCTTTAATAATAACATTATCTC TACT GAGATAATGTTATTATTAAAAA TAAATGATTTTGTTC TERM 130 151267 - 151294 + G 100 -13 -3.63694 | opp_overlap 151257 151256 151270, overlap 151270 TAAAGTCTTTAATAA TAACATTATCTC TACT GAGATAATGTTA TTATTAAAAATAAAT TERM 131 151270 - 151291 + G 89 -10.3 -3.95324 | opp_overlap 151257 151256 151270, overlap 151267 AGTCTTTAATAATAA CATTATCTC TACT GAGATAATG TTATTATTAAAAATA TERM 132 151291 - 151270 - g 89 -10.3 -3.94877 | opp_overlap 151270 151267, overlap 151257 151256 AGTCTTTAATAATAA CATTATCTC TACT GAGATAATG TTATTATTAAAAATA OTT_0161 150404 - 151798 + | hypothetical protein TERM 133 152529 - 152539 + F 80 -4 -5.58179 | TGGCTAGATAATAGC TACT AGG AGTA TTTTTTCTTGTCATC TERM 134 152569 - 152590 + F 76 -8.9 -2.97146 | opp_overlap 152569, overlap 152568 CATTTTTTACCTAAA GCTATTATT TCTT AATAATAGC ATTCTTTGACATATT TERM 135 152590 - 152569 - f 80 -8.9 -3.6502 | opp_overlap 152568 152569 CATTTTTTACCTAAA GCTATTATT TCTT AATAATAGC ATTCTTTGACATATT TERM 136 153153 - 153143 - g 70 -4 -4.99035 | opp_overlap 153143 CCACGTATACAAAAA TTTC TAG GAAA ATTATCAGTAGCAGA TERM 137 155705 - 155691 - g 78 -2.2 -5.7946 | TGTTGAATAAAAAAA TAACAA TTC TTATTA TAGATGATGATCAAA TERM 138 155828 - 155849 + G 72 -6 -4.42062 | AGTAATCCAGCACTG TATCAAGT TATTTT ACTTGATA TTTCTTTACCAGATA OTT_0162 152846 - 156073 + | sensor histidine kinase/response regulator/transporter hybrid protein OTT_0163 156678 - 156848 + | transposase TERM 139 157427 - 157447 + F 78 -2.6 -5.86965 | opp_overlap 157391 GCAGACATTTGTCTA CTAATGCT CCTAT AACATTAG TTTTTTTTGATGGAT TERM 140 158407 - 158393 - g 72 -5.7 -4.3665 | CAATTTAAAGATAAA GCTAC CAAAT GTAGC TCAAATAATATCAAC trpS 158057 - 159064 + | tryptophanyl-tRNA synthetase OTT_0165 159769 - 159629 - | RelA/SpoT-related protein OTT_0166 161632 - 160184 - | replicative DNA helicase TERM 141 160430 - 160460 + g 100 -12.1 -4.98522 | gap 1, opp_overlap 160430 ATCTTGTTCAATTGA GCCTGATTCTCTCA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT TERM 142 160460 - 160430 - G 87 -12.1 -2.52543 | gap 1, opp_overlap 160430 ATCTTGTTCAATTGA GCCTGATTCTCTCA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT TERM 143 160525 - 160540 + g 80 -7.6 -4.1721 | opp_overlap 160537 TGACTGGAATATTGA GCTCTT TAGC AAGAGC TTTTAAGCTCTGAGT OTT_0167 162174 - 161641 - | hypothetical protein TERM 144 162039 - 162061 + g 74 -5.7 -4.58283 | GTAATATTTTTGATC TATCACATT CTGTT AGTGTGATA TTTTTAAGCAACTTA OTT_0168 163021 - 163200 + | reverse transcriptase OTT_0169 164770 - 164258 - | hypothetical protein TERM 145 165076 - 165088 + r 82 -6.3 -5.10497 | overlap 165086 TTTGATTCTCTTGAT TAGCT TGA AGCTA TTTTTTCAATAGGTT OTT_0170 166856 - 166062 - | ComL-like lipoprotein TERM 146 166952 - 166972 + H 74 -9.1 -2.91681 | overlap 166955 GCACGCTTTTATGAG CGACAGATT TTG AATCTGTTG TGTCTACCATTCCAC lspA 167151 - 167657 + | lipoprotein signal peptidase TERM 147 168042 - 167992 - f 75 -7.4 -4.07526 | opp_overlap 167998, overlap 167994 167995 AATTATCTATATAAA TATGT-ATAGCCAAACTACTATAA AGCAG TTATAATAGCTTGGCTATTAC-TA TGACCTAGATATGCT TERM 148 168041 - 167994 - f 74 -8.1 -3.6269 | gap 1, opp_overlap 167998, overlap 167992 167995 TTATCTATATAAATA TGT-ATAGCCAAACTACTATAA AGCAG TTATAATAGCTTGGCTATTACT ATGACCTAGATATGC TERM 149 168040 - 167995 - f 87 -11.6 -2.77132 | gap 1, opp_overlap 167998, overlap 167994 167992 TATCTATATAAATAT GT-ATAGCCAAACTACTATAA AGCAG TTATAATAGCTTGGCTATTAC TATGACCTAGATATG TERM 150 167998 - 168036 + F 78 -9.1 -3.27022 | opp_overlap 167995 167994 167992 CTATATAAATATGTA TAGCCAAACTACTATAA AGCAG TTATAATAGCTTGGCTA TTACTATGACCTAGA OTT_0172 168769 - 170226 + | putative conjugative transfer protein TraA OTT_0173 170241 - 171038 + | putative conjugative transfer protein TraA OTT_0174 171302 - 171772 + | putative conjugative transfer protein TraI OTT_0175 171801 - 172121 + | putative conjugative transfer protein TraI OTT_0176 172114 - 172485 + | putative conjugative transfer protein TraI OTT_0177 173597 - 172509 - | putative conjugative transfer protein TraA OTT_0178 173876 - 174331 + | putative conjugative transfer protein TraD OTT_0179 175158 - 174373 - | exodeoxyribonuclease III TERM 151 175684 - 175634 - R 71 -7.3 -3.78329 | gap 1, opp_overlap 175633 175643, overlap 175638 175642 175643 175645 TGTTATTAATTGAAA CTAATATACGAGATAATATACAAT TCTA ACTGTATATTATCTCTTGTA-TAG CTTTTGCCTGATACT TERM 152 175681 - 175638 - R 80 -9.2 -3.57507 | opp_overlap 175633 175643, overlap 175634 175642 175643 175645 ATTAATTGAAACTAA TATACGAGATAATATACAAT TCTA ACTGTATATTATCTCTTGTA TAGCTTTTGCCTGAT TERM 153 175677 - 175642 - R 83 -10 -3.23532 | opp_overlap 175633 175643, overlap 175638 175634 175643 175645 ATTGAAACTAATATA CGAGATAATATACAAT TCTA ACTGTATATTATCTCT TGTATAGCTTTTGCC TERM 154 175643 - 175676 + r 93 -11.3 -3.59984 | opp_overlap 175643 175642 175638 175634 175645, overlap 175633 TTGAAACTAATATAC GAGATAATATACAAT TCTA ACTGTATATTATCTC TTGTATAGCTTTTGC TERM 155 175676 - 175643 - R 100 -13.5 -2.53396 | opp_overlap 175633 175643, overlap 175642 175638 175634 175645 TTGAAACTAATATAC GAGATAATATACAAT TCTA ACTGTATATTATCTC TTGTATAGCTTTTGC TERM 156 175674 - 175645 - R 83 -10.3 -2.79677 | opp_overlap 175643 175633, overlap 175643 175642 175638 175634 GAAACTAATATACGA GATAATATACAAT TCTA ACTGTATATTATC TCTTGTATAGCTTTT OTT_0180 177715 - 175772 - | hypothetical protein TERM 157 177984 - 177956 - H 100 -11.9 -3.91716 | opp_overlap 177960 TCATTTTCTAAATAA TCAAGTAATGCAA ATA TAGCATTACTTGA TTCAAAATTAAACAA TERM 158 178168 - 178126 - H 87 -8.3 -4.77157 | opp_overlap 178126 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGGTT TERM 159 178126 - 178168 + H 91 -8.3 -4.91657 | opp_overlap 178126 TCAATCCAGCAAAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGGTT TERM 160 179005 - 178989 - g 71 -2.3 -5.38951 | overlap 178996 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0181 178715 - 179137 + | transposase OTT_0182 179469 - 181364 + | repeat-containing protein A_01 OTT_0183 181771 - 181490 - | replicative DNA helicase, DnaB TERM 161 181685 - 181715 + g 100 -9.9 -4.98522 | gap 1, opp_overlap 181685 GTCCTGTTCAATGGA GCCTGATTCTCTCA GATC TGAGAGAAT-GGGC TTTTTATCTGACCTT OTT_0184 182132 - 181908 - | transposase OTT_0185 182339 - 183085 + | transposase OTT_0186 184003 - 183428 - | hypothetical protein OTT_0187 184547 - 184092 - | putative conjugative transfer protein TraD OTT_0188 184843 - 184944 + | putative conjugative transfer protein TraA TERM 162 187268 - 187238 - g 82 -7.7 -4.61162 | overlap 187259 187262 ACATCAAAGAACAAA GACAGTATGATTA TGATG TAACCATTCTGTC AGCAGAAGGAAAAAC OTT_0189 185050 - 187659 + | putative conjugative transfer protein TraA TERM 163 187735 - 187715 - f 74 -6.2 -4.55491 | GAGCGAATTACAAAA TGAGCTAT ACATA ACAGCTCA CAGTGATGCTTGCAA OTT_0190 187990 - 189060 + | putative conjugative transfer protein TraI TERM 164 189463 - 189437 - g 79 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTACAACGGCA TERM 165 189644 - 189694 + G 100 -13.3 -2.84098 | opp_overlap 189644 189648, overlap 189648 189651 189654 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 166 189694 - 189644 - g 100 -13.3 -4.84262 | opp_overlap 189644 189648 189651 189654, overlap 189648 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA OTT_0191 189112 - 189672 + | putative transposase TERM 167 189648 - 189690 + T 80 -8.3 -4.10331 | opp_overlap 189644 189648, overlap 189644 189651 189654 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 168 189690 - 189648 - T 91 -8.3 -4.91657 | opp_overlap 189648 189644 189651 189654, overlap 189644 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0192 190656 - 189688 - | transposase TERM 169 190050 - 190025 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 190025 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 170 190196 - 190212 + g 73 -8.1 -3.54574 | overlap 190193 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0193 190923 - 191309 + | putative integrase OTT_0194 191374 - 191667 + | hypothetical protein OTT_0195 192106 - 192372 + | putative conjugative transfer protein TraU OTT_0196 192419 - 192817 + | putative conjugative transfer protein TraN OTT_0197 192854 - 193039 + | putative conjugative transfer protein TraN OTT_0198 193050 - 193214 + | putative conjugative transfer protein TraF OTT_0199 193211 - 194104 + | putative conjugative transfer protein TraH OTT_0200 194269 - 194613 + | putative conjugative transfer protein TraD OTT_0201 195183 - 194602 - | putative conjugative transfer protein TraD TERM 171 194660 - 194635 - GT 70 -4.7 -4.67168 | overlap 194636 AAAAAGCGCTAAAAA GGCCTCAAAAA TCTG TTTTGGAGGCT TGCCATTAGTAAAGA TERM 172 194659 - 194636 - GT 73 -8.2 -3.38674 | overlap 194635 AAAAGCGCTAAAAAG GCCTCAAAAA TCTG TTTTGGAGGC TTGCCATTAGTAAAG OTT_0202 195601 - 195143 - | putative conjugative transfer protein TraD OTT_0203 196806 - 195607 - | putative conjugative transfer protein TraG TERM 173 195996 - 195941 - G 76 -8.6 -3.49653 | gap 1, opp_overlap 195941, overlap 195958 ATCATTCCTAGACAA TGGATTATTGTAAAAAATACTGGCCAG CTG CTGACCCATATTATTAACAA-AATCCA TGTTTTGAGTATGTT TERM 174 195980 - 195958 - G 75 -4.8 -5.06451 | opp_overlap 195941, overlap 195941 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAACAAAATCC TERM 175 196789 - 196778 - G 72 -5.8 -4.41422 | TTAGATACAAAATAA CTCG TTTG CGAG GAAAGAGAAGCAAAC TERM 176 196895 - 196845 - R 100 -13.3 -4.84262 | opp_overlap 196845 196849 196852 196855, overlap 196849 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 177 196845 - 196895 + r 100 -13.3 -2.84098 | opp_overlap 196845 196849, overlap 196849 196852 196855 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 178 196849 - 196891 + r 80 -8.3 -4.10331 | opp_overlap 196845 196849, overlap 196845 196852 196855 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 179 196891 - 196849 - R 91 -8.3 -4.91657 | opp_overlap 196849 196845 196852 196855, overlap 196845 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0204 197857 - 196889 - | transposase TERM 180 197251 - 197226 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 197226 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 181 197397 - 197413 + g 73 -8.1 -3.54574 | overlap 197394 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0205 198363 - 198028 - | putative conjugative transfer protein TraG OTT_0206 198842 - 198363 - | putative conjugative transfer protein TraH OTT_0207 199437 - 198772 - | putative conjugative transfer protein TraH OTT_0208 199665 - 199519 - | putative conjugative transfer protein TraH OTT_0209 200384 - 199662 - | putative conjugative transfer protein TraF OTT_0210 201766 - 200588 - | ankyrin repeat-containing protein 04_01 TERM 182 201828 - 201790 - R 95 -12.2 -3.06162 | opp_overlap 201790 201792 201795 201801, overlap 201792 201795 201799 201801 201814 CACCCTATTTTAATA TATAATAAACATACACAT AAA ATGTATATATTTATTATA TATTAAAATATGAGT TERM 183 201826 - 201792 - R 84 -10.4 -3.08813 | opp_overlap 201790 201792 201795 201801, overlap 201790 201795 201799 201801 201814 CCCTATTTTAATATA TAATAAACATACACAT AAA ATGTATATATTTATTA TATATTAAAATATGA TERM 184 201823 - 201795 - R 71 -7.7 -3.68738 | opp_overlap 201795 201792 201790 201801, overlap 201792 201790 201799 201801 201814 TATTTTAATATATAA TAAACATACACAT AAA ATGTATATATTTA TTATATATTAAAATA OTT_0211 203614 - 201923 - | putative conjugative transfer protein TraN OTT_0212 203931 - 203611 - | putative conjugative transfer protein TrbC OTT_0213 204699 - 204016 - | putative conjugative transfer protein TraU TERM 185 204869 - 204844 - RH 72 -4.9 -4.83169 | ATGTTTTGAGAAAAA TATGATTTTGT TAAT AAAAAATCATA TAAAATAATTAAAAA OTT_0215 207874 - 206018 - | putative conjugative transfer protein TraC OTT_0214 205067 - 206104 + | ankyrin repeat-containing protein 05_01 OTT_0216 208115 - 207786 - | hypothetical protein OTT_0217 208384 - 208115 - | putative conjugative transfer protein TraB OTT_0218 209165 - 208347 - | putative conjugative transfer protein TraB OTT_0219 209813 - 209484 - | hypothetical protein OTT_0220 210654 - 210178 - | hypothetical protein OTT_0221 211202 - 210651 - | putative conjugative transfer protein TraE OTT_0222 211537 - 211202 - | hypothetical protein OTT_0223 212912 - 212022 - | putative integrase OTT_0224 213349 - 213648 + | hypothetical protein OTT_0226 216340 - 215330 - | ankyrin repeat-containing protein 06_01 OTT_0225 213629 - 215431 + | putative conjugative transfer protein TraC OTT_0227 216495 - 217082 + | putative conjugative transfer protein TraU OTT_0228 217167 - 217487 + | putative conjugative transfer protein TrbC OTT_0229 217484 - 218251 + | putative conjugative transfer protein TraN OTT_0230 218540 - 219172 + | putative conjugative transfer protein TraN OTT_0231 219424 - 220932 + | TPR repeat-containing protein 03 OTT_0232 221043 - 221489 + | hypothetical protein OTT_0233 221766 - 222332 + | putative conjugative transfer protein TraF TERM 186 222458 - 222474 + T 81 -2.3 -5.97575 | overlap 222455 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTTTATACCTT OTT_0234 222809 - 222612 - | transposase OTT_0235 223721 - 223065 - | hypothetical protein OTT_0236 224077 - 223718 - | ankyrin repeat-containing protein 03_02 OTT_0237 224588 - 224310 - | ankyrin repeat-containing protein 03_03 OTT_0238 225371 - 224907 - | hypothetical protein TERM 187 225034 - 225050 + g 72 -7.3 -3.80858 | opp_overlap 225034 225030 ACTTTGAATAATATA GAGTTAG AGC CTAGCTC TTTACTAAGTTCTGA OTT_0239 225680 - 225447 - | hypothetical protein TERM 188 225613 - 225627 + g 74 -8.6 -3.25459 | opp_overlap 225611 225606, overlap 225611 CTACTAAACATACGT TGCAGT ATA ACTGCA TCTTCTGGCGTTAGT TERM 189 226159 - 226183 + r 72 -3.7 -5.24449 | ATATGGACCCGAAAT TTTTTTTTCTG GTA TAGAGGAAAAA TTTTTTCAGTTTGTG OTT_0240 226629 - 226507 - | hypothetical protein TERM 190 226637 - 226663 + r 74 -6.6 -4.26634 | GGTTGCATATTTTTC CTCCTGAAATAT CCA ATATGGCAGGAG TTTTAGAATTATTTT OTT_0241 227082 - 226846 - | putative conjugative transfer protein TraB TERM 191 227246 - 227271 + H 100 -12.1 -5.48623 | opp_overlap 227242 227241 227236 227246 227251 ATTAATAAAAGTTAA CAGAAGTTAAT AAAA ATTAACTTCTG TTTTTCTTTATATTT TERM 192 227271 - 227246 - H 95 -12.1 -3.46236 | opp_overlap 227246, overlap 227242 227241 227236 227251 ATTAATAAAAGTTAA CAGAAGTTAAT AAAA ATTAACTTCTG TTTTTCTTTATATTT TERM 193 228062 - 228046 - H 76 -8.1 -3.8594 | AACATTGACATCAAA TGAAGAA TTA TTCTTCA AAATACCTACATTTT TERM 194 229145 - 229161 + G 72 -3.7 -5.23316 | TGCAAGTTGGAAGAT CTCAAGA ATT TGTTGAG TTTTTTGCTATGATA ctaQ 228229 - 229719 + | thermostable carboxypeptidase mgtE 231191 - 229824 - | magnesium transporter TERM 195 229901 - 229921 + g 75 -9.7 -2.89563 | opp_overlap 229898 229896, overlap 229900 CTGTCAAAAATACTG TTGACCCAG CTG CTGGGTCCA GTTTAATACTATGTA TERM 196 230070 - 230053 - G 86 -5.7 -5.43414 | ATCATACACAAAAAA CTTATTA GCGC TAATAAG AATCCATTAAAGCTA OTT_0244 232396 - 231377 - | hypothetical protein TERM 197 231938 - 231920 - G 74 -7.4 -4.08644 | opp_overlap 231903 231920 231919 231920 231925, overlap 231903 231918 AGTATTAGAAAAATA TACTGCTG CTT CTGCAGTA ATATTTTTACCTGCT leuS 234935 - 232416 - | leucyl-tRNA synthetase TERM 198 234641 - 234666 + g 80 -7.7 -4.25859 | overlap 234638 TAACATCAACGTTGC TATTTACCCAA CTAT TTGGGTGAGTA TTATTTTGCATTGCA TERM 199 235082 - 235110 + r 80 -3.9 -5.58051 | GAGTAAAAATTTTTA TGAGCAGTACT AAATGCA AGTACAGCTTA TTTTATTTTTTCTTT OTT_0246 236286 - 235555 - | protocatechuate 3,4-dioxygenase beta subunit TERM 200 235634 - 235673 + g 90 -12.4 -2.8664 | overlap 235627 ATGACTAGTGTTACA TGCTCTACAATAAAATAG TTGT CAATATTATTGTAGAGCA TATGATCATTACATG TERM 201 237742 - 237757 + r 70 -5.4 -4.58283 | opp_overlap 237742 AAGCATGATAACTAA GCAGTT TCTT GACTGC TTTTTGCAGAAATTA TERM 202 237780 - 237798 + r 78 -2.4 -5.89947 | AGAAATTATTGCCGA TATGATCT AAG GGAACATA TTTTTTTTAACTTTC gppA 239233 - 237770 - | guanosine pentaphosphate phosphohydrolase OTT_0248 240409 - 240017 - | transposase OTT_0249 240931 - 240566 - | transposase OTT_0250 242373 - 241933 - | ankyrin repeat-containing protein 07_01 OTT_0251 243535 - 243251 - | replicative DNA helicase TERM 203 243491 - 243521 + g 95 -8.5 -4.98522 | gap 1, opp_overlap 243491 GTCTTGTTCAATTGA GCCTGATTCTCTTA GATC TGAGAGAAT-AGGC TTTTTATCTGACATT OTT_0252 244694 - 243525 - | replicative DNA helicase OTT_0253 246262 - 244703 - | hypothetical protein TERM 204 245101 - 245123 + g 74 -5.7 -4.58283 | GTAATATCTTTGATC TATCACATT CTGTT AGTGTGATA TTTTTAAGCAACTTA TERM 205 245640 - 245666 + g 76 -5.4 -4.96523 | opp_overlap 245640 245652, overlap 245653 GAAGTCTGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 206 245720 - 245734 + g 84 -3.6 -5.77988 | CTCACCTTCAGTAGA TCTAGA TCT TTTAGA TTTTTTTATATATCT TERM 207 245788 - 245769 - G 75 -5 -5.00884 | opp_overlap 245770, overlap 245770 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCAGGTTGGG TERM 208 245770 - 245787 + g 88 -8.5 -4.46233 | opp_overlap 245769 245770 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 209 245787 - 245770 - G 77 -8.5 -3.60048 | opp_overlap 245770, overlap 245769 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 210 245859 - 245877 + g 70 -4.6 -4.82901 | overlap 245861 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA OTT_0254 248063 - 247713 - | probable sigma(54) modulation protein TERM 211 249236 - 249210 - g 72 -4.7 -4.74012 | gap 1, opp_overlap 249210 249211 249212 249214, overlap 249212 AGCAGAAAAGGAAAA TATAGCTAAAAA CAAA TTTTTAGCTA-A TGTTAGTCATGAACT TERM 212 249235 - 249212 - g 86 -9.8 -3.96876 | opp_overlap 249211 249210 249212 249214, overlap 249210 CAGAAAAGGAAAATA TAGCTAAAAA CAAA TTTTTAGCTA ATGTTAGTCATGAAC TERM 213 249212 - 249235 + G 74 -9.8 -2.50016 | opp_overlap 249212 249210, overlap 249211 249210 249214 CAGAAAAGGAAAATA TAGCTAAAAA CAAA TTTTTAGCTA ATGTTAGTCATGAAC TERM 214 249621 - 249607 - g 74 -5.8 -4.72029 | opp_overlap 249606 TCTAATTCAATAAAA TTTACT CCT AGTAAA GGTTCTATAACACTT barA 248398 - 249909 + | histidine kinase sensor protein TERM 215 249958 - 249931 - f 83 -10 -3.19687 | overlap 249929 249927 249925 AATGGCAAATATATA GGTTATGCTATA GGTA TCTAGCATAACC AAAATGATAGAAATG OTT_0256 250660 - 252114 + | replicative DNA helicase, DnaB TERM 216 252443 - 252474 + T 71 -8.2 -3.21099 | opp_overlap 252443 ATGTTGTAGAGGTAA GGTTTTGAATTTTA TTTA TGCAATTCAAAACC TTAATAGTGCAAGCA OTT_0257 253769 - 252600 - | ankyrin repeat-containing protein 08 groES 254704 - 254988 + | chaperonin, 10 kDa groEL 255061 - 256728 + | chaperonin, 60 kDa TERM 217 256707 - 256738 + T 93 -11.6 -3.75153 | overlap 256709 CGGACATCATGGTGG TATGGGCGGAATGG ATTT CTAATCCGCCCATG TTTACCTTCAAAAAA TERM 218 256709 - 256736 + T 95 -12 -3.46068 | overlap 256707 GACATCATGGTGGTA TGGGCGGAATGG ATTT CTAATCCGCCCA TGTTTACCTTCAAAA TERM 219 258394 - 258443 + T 83 -10.3 -2.82015 | CCTTTCATATTTCCC TTATCCTATTCTGGCGTTAAT AATACCAG ATTAACACCAGATTGGGATAA TGTAGTAGCTATACC TERM 220 258552 - 258514 - T 95 -12.1 -3.31269 | opp_overlap 258522, overlap 258522 TCTAGATCATAGTAA TAGCTAAACTATTATAA CTGCT TTATAGTAGTTTAGCTA TAGAAGAGAAAGAAT TERM 221 258642 - 258618 - T 78 -9.5 -3.02461 | opp_overlap 258618 258621, overlap 258621 TAACTTTCTTCAAGA TAAGCATTTAT TAA ATAAACGCTTA TTAATTGAGTCTGTT acpS 259253 - 258858 - | holo-[acyl carrier protein] synthase spoT 261399 - 259264 - | SpoT protein OTT_0262 261803 - 261417 - | hypothetical protein OTT_0263 262153 - 262893 + | hypothetical protein OTT_0264 263053 - 263382 + | hypothetical protein OTT_0265 263405 - 263782 + | hypothetical protein obg 263802 - 264791 + | GTP-binding protein Obg TERM 222 265234 - 265264 + F 72 -6.4 -4.40237 | opp_overlap 265236 265240, overlap 265236 265240 AAACTGCGCGGAACC AACAAATAATATTG CAA TAATATTATTTGTG TTTTAGTATATAATG TERM 223 265262 - 265236 - f 73 -8.3 -3.33815 | opp_overlap 265234 265236 265240, overlap 265240 ACTGCGCGGAACCAA CAAATAATATT GCAAT AATATTATTTG TGTTTTAGTATATAA TERM 224 265236 - 265262 + F 82 -9 -3.79993 | opp_overlap 265236 265240, overlap 265234 265240 ACTGCGCGGAACCAA CAAATAATATTG CAA TAATATTATTTG TGTTTTAGTATATAA TERM 225 265364 - 265388 + G 72 -9.3 -2.71322 | overlap 265362 265368 ATTATTTTGGTGCTT TTTGGGGCAGG GCG CTTGCCTCAAG TAATGTCTGACTTAG tatA 265310 - 265468 + | sec-independent protein translocase protein TatA OTT_0268 266467 - 265943 - | hypothetical protein TERM 226 267393 - 267351 - H 91 -8.3 -4.91657 | opp_overlap 267351 AATTAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGATGGATTGA TERM 227 267351 - 267393 + H 87 -8.3 -4.77157 | opp_overlap 267351 AATTAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTTTGATGGATTGA TERM 228 268050 - 268032 - g 70 -4.6 -4.82901 | overlap 268034 TCCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 229 268121 - 268140 + G 75 -5 -5.00884 | opp_overlap 268122, overlap 268122 CCCAACCTGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 230 268139 - 268122 - g 88 -8.5 -4.46233 | opp_overlap 268121 268122 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 231 268122 - 268139 + G 77 -8.5 -3.60048 | opp_overlap 268122, overlap 268121 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 232 268189 - 268175 - g 84 -3.6 -5.77988 | AGATATATAAAAAAA TCTAAA AGA TCTAGA TCTACTGAAGGTGAG TERM 233 268269 - 268243 - g 76 -5.4 -4.96523 | opp_overlap 268243 268246, overlap 268238 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACAGACTTC TERM 234 268808 - 268786 - g 74 -5.7 -4.58283 | TAAGTTGCTTAAAAA TATCACACT AACAG AATGTGATA GATCAAAGATATTAC OTT_0269 267647 - 269206 + | hypothetical protein TERM 235 270322 - 270307 - gT 80 -7.6 -4.1721 | opp_overlap 270297 ACTCAGAGCTTAAAA GCTCTT GCTA AAGAGC TCAATATTTCAATCA OTT_0271 270995 - 270468 - | hypothetical protein OTT_0270 269215 - 270600 + | replicative DNA helicase TERM 236 270601 - 270619 + gT 71 -4.6 -4.82901 | overlap 270603 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA TERM 237 272615 - 272640 + Tr 73 -9.2 -2.6574 | opp_overlap 272599 272617, overlap 272617 CTTATGTGACGCAGA TATGGTAACA TTTCTT TGTTACCATA TCATATAAATGCTTA OTT_0272 274403 - 273264 - | reverse transcriptase OTT_0273 274516 - 274827 + | hypothetical protein OTT_0274 275473 - 275084 - | hypothetical protein TERM 238 275125 - 275135 + g 74 -4 -5.30575 | TCTGTTTACTATCAT CATT AAT AATG TTTTTTAGCTTTTTC tdpX1 276859 - 277461 + | thioredoxin peroxidase 1 TERM 239 277738 - 277757 + G 72 -5 -4.92757 | opp_overlap 277738 TTACAAGAAATAGAA GCGTTGAG AAAA TTCAATGC TTTTCTTCTTACTCA smf 277504 - 278664 + | DNA processing protein Smf OTT_0277 279293 - 279730 + | transposase TERM 240 279906 - 279890 - g 71 -2.3 -5.38951 | overlap 279897 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAAAAAAGC OTT_0278 279742 - 279993 + | transposase TERM 241 280631 - 280616 - g 76 -6.2 -4.65916 | opp_overlap 280615 280616 GCTAGCTCAAGAAAA TGGTAT TGAT ATACCA GTATTTTCAAAAGAG TERM 242 281518 - 281503 - g 84 -3.4 -5.72616 | AGTTAGAGAAAAAAA TTAATA ATTA TATTAA AGAAATCAAAGATTG dnaG 280344 - 282119 + | DNA primase TERM 243 282332 - 282310 - g 77 -7.8 -4.10566 | ATCGAAGAAGAAGAA GTAGTATTAG CTT CTAATGCTAC TGAAGGAGAATTTGA rpoD 282103 - 283950 + | RNA polymerase sigma factor RpoD TERM 244 284656 - 284635 - g 78 -8.9 -3.51837 | opp_overlap 284638, overlap 284633 ATATAAGGAAGAAGA GAAGTTAAT TTTT ATTAACTTC TACACTTTATAGAAC OTT_0281 284210 - 284668 + | hypothetical protein TERM 245 284903 - 284892 - f 70 -3 -5.33785 | AATTAGTATAAAAAA TTTG ATAT CAAA AAAAGCATAATTTAT TERM 246 285625 - 285613 - g 74 -6.3 -4.45115 | overlap 285610 285615 ATTAATAGAAAACAA TCCTA CTC TAGGA ATAGAGCAGCATAAA TERM 247 285721 - 285711 - g 71 -5.4 -4.60487 | TATTATGCGGAAAAA CAAC TCC GTTG ATAAGAGATTTTGCA OTT_0282 284984 - 285757 + | putative integrase OTT_0283 285782 - 286228 + | putative integrase TERM 248 286273 - 286255 - Tf 73 -8.1 -3.38812 | overlap 286253 GTTGTGGTAAGAATA GCGCGAC TTCAT GTCGCAC ATGCATGCATGTAAA OTT_0284 286848 - 286549 - | hypothetical protein TERM 249 287022 - 287072 + Gr 100 -13.3 -2.84098 | opp_overlap 287022 287026, overlap 287026 287029 287032 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 250 287072 - 287022 - gR 100 -13.3 -4.84262 | opp_overlap 287022 287026 287029 287032, overlap 287026 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA OTT_0285 286832 - 287050 + | reverse transcriptase TERM 251 287026 - 287068 + Tr 80 -8.3 -4.10331 | opp_overlap 287026 287022, overlap 287022 287029 287032 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 252 287068 - 287026 - TR 91 -8.3 -4.91657 | opp_overlap 287022 287026 287029 287032, overlap 287022 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0286 288028 - 287066 - | transposase TERM 253 287428 - 287403 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 287403 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 254 287574 - 287590 + g 73 -8.1 -3.54574 | overlap 287571 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0287 288281 - 289216 + | reverse transcriptase OTT_0288 290294 - 289650 - | ankyrin repeat-containing protein 03_04 OTT_0289 290727 - 290332 - | RelA/SpoT-related protein OTT_0290 292586 - 291138 - | replicative DNA helicase OTT_0291 293266 - 292595 - | hypothetical protein TERM 255 293379 - 293393 + r 75 -8.6 -3.3375 | overlap 293377 293392 CTATCAGACTTGTGT TGCAGT GCA ACTGCA TCTTCTGGTGTTAGT TERM 256 293532 - 293558 + r 75 -5.4 -4.96523 | opp_overlap 293532 293544, overlap 293545 GAAATCTGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 257 293680 - 293661 - R 74 -5 -5.00884 | opp_overlap 293662, overlap 293662 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCAGGTTGGG TERM 258 293662 - 293679 + r 83 -8.5 -4.46233 | opp_overlap 293661 293662 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 259 293679 - 293662 - R 76 -8.5 -3.60048 | opp_overlap 293662, overlap 293661 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 260 293751 - 293769 + r 71 -4.6 -4.82901 | overlap 293753 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA TERM 261 294088 - 294098 + r 78 -2.6 -5.75342 | AAAATATTGTGTCAT TATT GTT AATA TTTTTTTTAAAAAAA rne 296513 - 294486 - | ribonuclease E TERM 262 295166 - 295181 + g 75 -4.8 -5.08011 | CTTGTATTTTTGCTT TATCTT TAGC AAGATA TTTTTTGAAGCTTTT TERM 263 296593 - 296615 + H 78 -10 -2.64091 | opp_overlap 296580, overlap 296584 296576 CATGCAGGTTATTAT TGCATACTTG TTG TAAGTATGCA TAATATAACCTCATT OTT_0293 297321 - 301553 + | SpoT related protein TERM 264 303576 - 303557 - g 72 -3.6 -5.27477 | overlap 303561 ACCCCAATGAAAAAA TTGACCTT AAAA AAGGTAAA GCAGTTTTATGACTC OTT_0294 301994 - 303985 + | hypothetical protein pdhC 304277 - 304579 + | dihydrolipoamide acetyltransferase component mreB 304680 - 305744 + | rod shape-determining protein MreB TERM 265 305868 - 305878 + G 74 -5.4 -4.93296 | ATTATCGTGTCTATA TGCA CAA TGCA TTTTTCTAATACTAC mreC 305751 - 306602 + | rod shape-determining protein MreC TERM 266 307202 - 307236 + F 81 -7.4 -4.70659 | opp_overlap 307205 AATAGAGGACTTTAA TAAGTATTTTGAAC AAAGGAA GTGCAAAATACTTA TTTTTAACTCTAAAA OTT_0298 307356 - 308624 + | ankyrin repeat-containing protein 09 TERM 267 309035 - 309058 + T 70 -5.4 -4.59109 | opp_overlap 309035 ACTATAGCTAAACTA GTATAAAACA GTTA TGTTATATAC TTTTTGAAAAGTGTA OTT_0299 309386 - 309141 - | hypothetical protein OTT_0300 312502 - 310742 - | hypothetical protein ntrX 314079 - 312610 - | nitrogen assimilation regulatory protein NtrX ntrY 315797 - 314220 - | nitrogen regulation protein NtrY TERM 268 314855 - 314830 - G 72 -9.1 -2.71791 | opp_overlap 314829, overlap 314829 314833 ACTTCTTTGCCAAAT TTATCTGCTAG CATA CTAGCAGATAG CTGTATAGGAGTAAG TERM 269 314852 - 314833 - G 82 -10.8 -2.64155 | opp_overlap 314829, overlap 314830 314829 TCTTTGCCAAATTTA TCTGCTAG CATA CTAGCAGA TAGCTGTATAGGAGT TERM 270 316148 - 316138 - R 70 -5.4 -4.60255 | AGAATTGTTTAAAAA GCAA AAA TTGC AAAATAATGTTTAAC TERM 271 316167 - 316153 - R 70 -5.8 -4.31329 | GCAAAAATTGCAAAA TAATGT TTA ACATTA TACATACATCTCAAT OTT_0303 318512 - 316464 - | hypothetical protein OTT_0304 319436 - 318669 - | hypothetical protein TERM 272 320444 - 320422 - g 74 -5.7 -4.58283 | TAAGTTGCTTAAAAA TATCACACT AACAG AATGTGATA AATCAAAGATATTAC OTT_0305 320345 - 320842 + | hypothetical protein OTT_0306 320851 - 321282 + | replicative DNA helicase OTT_0307 321972 - 322583 + | putative integrase OTT_0308 322562 - 322948 + | putative integrase OTT_0309 323001 - 323306 + | hypothetical protein OTT_0310 323735 - 324037 + | hypothetical protein OTT_0311 324037 - 324141 + | hypothetical protein OTT_0312 324241 - 324714 + | putative conjugative transfer protein TraB TERM 273 325338 - 325318 - g 95 -9.1 -5.08011 | AAAACTTCTAAAAAA TTTTCAGCG TTT CACTGAAAA AGAAACAAAAGGAGA TERM 274 325423 - 325380 - g 79 -4.9 -5.16572 | opp_overlap 325411, overlap 325404 ATCTAACCCAAAAAA TTTTTC-GCTCCAACCTGAAA GAAA TTTCAGG-TGAACCTGAAAAA AGTTTCAGGTACATA TERM 275 325421 - 325404 - g 88 -8.5 -4.46233 | opp_overlap 325411, overlap 325380 CCAACCTGAAAGAAA TTTCAGG TGAA CCTGAAA AAAGTTTCAGGTACA TERM 276 325411 - 325436 + G 73 -9.1 -2.93858 | opp_overlap 325404 325380 GAAAGAAATTTCAGG TGAACCTGAAA AAAG TTTCAGGTACA TATATAGATATAATA OTT_0313 324923 - 326638 + | hypothetical protein OTT_0314 326647 - 328083 + | replicative DNA helicase OTT_0315 328497 - 328892 + | RelA/SpoT-related protein OTT_0316 329027 - 329575 + | ankyrin repeat-containing protein 03_05 OTT_0317 329622 - 330170 + | hypothetical protein OTT_0318 330983 - 330174 - | N6 adenine-specific DNA-methyltransferase TERM 277 331407 - 331387 - g 84 -5.6 -5.40873 | AACAGAAAAATAAAA GTATATTT AATAA AAATATAC AGTCAAAACTGTTAC OTT_0319 331350 - 331628 + | hypothetical protein TERM 278 331609 - 331638 + F 71 -7.3 -3.79633 | gap 1, opp_overlap 331605 331609 331612, overlap 331607 331612 TATGTCATATACCAA TC-AGCTTAGCTAA CTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 279 331634 - 331612 - f 100 -13.6 -2.83345 | opp_overlap 331609 331607 331612, overlap 331605 331609 GTCATATACCAATCA GCTTAGCTAA CTG TTAGCTAAGC TTGCTATTTTAAATT TERM 280 331612 - 331634 + F 100 -13.6 -3.55453 | opp_overlap 331605 331612 331609, overlap 331609 331607 GTCATATACCAATCA GCTTAGCTAA CTG TTAGCTAAGC TTGCTATTTTAAATT TERM 281 331678 - 331664 - f 70 -2.9 -5.20328 | TTCTAAAAAAACAAA GTTAA TAAAC TTAAC CATAGGAGAATAATA OTT_0320 331693 - 332394 + | hypothetical protein TERM 282 332437 - 332471 + F 88 -9.4 -4.39571 | opp_overlap 332436 332439, overlap 332439 332443 CCATATGTGATATAC CAGTCAGCTTAGCTAA TTG TTAGCTAAGCTTGCTA TTTTAAATTTCTAAA TERM 283 332469 - 332439 - f 78 -9.8 -2.69977 | opp_overlap 332437 332439 332443, overlap 332436 ATATGTGATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 284 332439 - 332469 + F 95 -12 -3.79633 | opp_overlap 332439 332436, overlap 332437 332443 ATATGTGATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 285 332443 - 332465 + F 100 -13.6 -3.55453 | opp_overlap 332439 332436, overlap 332439 332437 GTGATATACCAGTCA GCTTAGCTAA TTG TTAGCTAAGC TTGCTATTTTAAATT OTT_0321 332523 - 332804 + | hypothetical protein OTT_0322 332846 - 333319 + | hypothetical protein OTT_0323 333342 - 334280 + | hypothetical protein OTT_0324 334299 - 334793 + | hypothetical protein OTT_0325 334835 - 335422 + | RelA/SpoT-related protein TERM 286 335415 - 335444 + F 74 -8.7 -3.30214 | opp_overlap 335423 ACTGTGAGCTTTATG CTACCTAATAAAC TAAA GTTTAATAGGTGG TTAATGTAGTGAATT OTT_0326 335544 - 336482 + | hypothetical protein OTT_0327 336618 - 336974 + | transposase OTT_0328 341089 - 337652 - | sensor histidine kinase/response regulator/transporter hybrid protein TERM 287 340400 - 340379 - G 78 -2.3 -5.8187 | TATGCAATAAAAAAA TACACCATA ATAT TTTAGTGTA TTGATATTATGGTAG OTT_0329 341538 - 341657 + | transposase OTT_0330 341931 - 342305 + | hypothetical protein OTT_0331 342611 - 343762 + | hypothetical protein TERM 288 343886 - 343934 + T 80 -8.3 -4.16279 | overlap 343897 TTATTTTTTTGCTAC CTTATTTCCCAGAGTTAACTCTG TTC CAGATTTAACTCTGTTAGAAAAG TTTTGAGCTAATATG TERM 289 343897 - 343923 + T 88 -11 -3.03903 | overlap 343886 CTACCTTATTTCCCA GAGTTAACTCTG TTC CAGATTTAACTC TGTTAGAAAAGTTTT OTT_0332 344623 - 344342 - | TPR repeat-containing protein 04 TERM 290 344702 - 344718 + r 70 -6.7 -3.89614 | opp_overlap 344709 GTATTAATAATACTG TCATATA TTT TATATGA TTTATAAAAATTCCC OTT_0333 345401 - 344946 - | putative conjugative transfer protein TraD TERM 291 345329 - 345357 + g 87 -5.3 -5.52384 | GTTCTTTAATTTTGA GGTTAACCTCATC CAT GATTAGCTTAGCC TTTTTTTGCTGAAGA OTT_0334 345696 - 347006 + | putative conjugative transfer protein TraA OTT_0335 346978 - 347688 + | putative conjugative transfer protein TraA OTT_0336 347703 - 347894 + | putative conjugative transfer protein TraA OTT_0337 347930 - 350077 + | putative conjugative transfer protein TraI TERM 292 350480 - 350454 - g 79 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTACAACGGCA TERM 293 350711 - 350661 - g 100 -13.3 -4.84262 | opp_overlap 350661 350665 350668 350671, overlap 350665 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 294 350661 - 350711 + G 100 -13.3 -2.84098 | opp_overlap 350661 350665, overlap 350665 350668 350671 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA OTT_0338 350129 - 350689 + | putative transposase TERM 295 350665 - 350707 + T 80 -8.3 -4.10331 | opp_overlap 350661 350665, overlap 350661 350668 350671 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 296 350707 - 350665 - T 91 -8.3 -4.91657 | opp_overlap 350665 350661 350668 350671, overlap 350661 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0339 351667 - 350705 - | transposase TERM 297 351067 - 351042 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 351042 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 298 351213 - 351229 + g 73 -8.1 -3.54574 | overlap 351210 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0340 352179 - 351844 - | putative conjugative transfer protein TraG OTT_0341 352658 - 352179 - | putative conjugative transfer protein TraH OTT_0342 353482 - 352853 - | putative conjugative transfer protein TraH OTT_0343 355033 - 353894 - | reverse transcriptase OTT_0344 355017 - 355316 + | hypothetical protein OTT_0345 355573 - 355854 + | hypothetical protein OTT_0346 356670 - 355858 - | N6 adenine-specific DNA-methyltransferase OTT_0347 359009 - 357141 - | hypothetical protein OTT_0348 359206 - 359346 + | hypothetical protein TERM 299 359427 - 359454 + F 74 -5 -5.1287 | gap 1, opp_overlap 359417, overlap 359417 359432 ATACAGAGATAAATT GCATA-TCTCATT TTG AATGAGATTTTGC TTTTTTCGGTGTAAA TERM 300 359432 - 359448 + F 91 -8.1 -4.86862 | opp_overlap 359417, overlap 359417 359427 GAGATAAATTGCATA TCTCATT TTG AATGAGA TTTTGCTTTTTTCGG OTT_0349 359695 - 360441 + | hypothetical protein OTT_0350 360446 - 360844 + | hypothetical protein OTT_0351 360865 - 361443 + | RelA/SpoT-related protein TERM 301 361684 - 361665 - g 80 -7.2 -4.6038 | gap 1, opp_overlap 361665 GATATTAAAGCAAAA CCTTATGGC TCA GCCA-AAGG TTATAATGCGAAAAT OTT_0352 361536 - 361874 + | transposase OTT_0353 361868 - 362374 + | transposase OTT_0354 362529 - 363467 + | hypothetical protein OTT_0355 363990 - 363535 - | putative conjugative transfer protein TraD OTT_0356 364269 - 365585 + | putative conjugative transfer protein TraA OTT_0357 365570 - 366280 + | putative conjugative transfer protein TraA OTT_0358 366295 - 367119 + | putative conjugative transfer protein TraA TERM 302 367195 - 367175 - f 74 -6.2 -4.5442 | GGGCGAATTACAAAA TGAGCTAT ACATA ACAGCTCA CAGTGATGTTTGTAA OTT_0359 367385 - 367942 + | putative conjugative transfer protein TraI OTT_0360 368881 - 368240 - | reverse transcriptase OTT_0361 369377 - 368844 - | reverse transcriptase OTT_0362 369361 - 369660 + | hypothetical protein TERM 303 370121 - 370110 - g 81 -3 -5.75342 | opp_overlap 370110 CTTTTTCAAAAAAAA TTCT ATAA AGAA TATCGTCAATTTGAT OTT_0363 369981 - 370457 + | hypothetical protein OTT_0364 370840 - 371649 + | hypothetical protein TERM 304 371780 - 371794 + F 75 -3.6 -5.52023 | TTTTGCTTTTATGGA TAGTGT TAA ACATTA TTTTTTCTTGATAAT TERM 305 371847 - 371861 + F 100 -7.2 -6.04324 | opp_overlap 371843 TCTTTACTAGAGTTA GCATAA CAG TTATGC TTTTTTCTTTTTTGA OTT_0365 372104 - 372376 + | hypothetical protein gatB 373846 - 372386 - | glutamyl-tRNA amidotransferase subunit B gatA 375327 - 373849 - | glutamyl-tRNA amidotransferase subunit A gatC 375626 - 375327 - | glutamyl-tRNA amidotransferase subunit C OTT_0369 377505 - 375709 - | metallo-beta-lactamase family protein TERM 306 377494 - 377504 + g 70 -4 -4.93968 | TAGTAATAATTTTTT TGTT AAG AACA TTTTTGATTATAGGT TERM 307 377554 - 377529 - R 78 -7.9 -4.32579 | opp_overlap 377529 ATAGGTGAGAACAAA TATATATTATT TAAA AATAATATATA TTAACTTATTCTTCT TERM 308 377529 - 377554 + r 70 -7.9 -3.34232 | opp_overlap 377529 ATAGGTGAGAACAAA TATATATTATT TAAA AATAATATATA TTAACTTATTCTTCT czcR 378297 - 377560 - | transcriptional activator protein CzcR TERM 309 379150 - 379169 + H 73 -9.2 -2.65808 | opp_overlap 379146 379150, overlap 379147 AAAGGAGGTAATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 310 379169 - 379150 - H 87 -11.4 -2.56288 | opp_overlap 379150 379147, overlap 379146 AAAGGAGGTAATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 311 379672 - 379653 - H 71 -8 -3.29324 | TCCAGCCAAACTGAA GAAAAATG TCTC CATTTTTC GCGACTACCATGTCA TERM 312 380568 - 380543 - H 81 -9.9 -3.14132 | opp_overlap 380543 380547, overlap 380547 CCCGTTTGCCACTAA TTAATGCTAAG CAAG CTCAGCATTAA TTCGTTCGACTTGCA TERM 313 380543 - 380568 + H 70 -7.7 -3.37612 | opp_overlap 380543 380547, overlap 380547 CCCGTTTGCCACTAA TTAATGCTAAG CAAG CTCAGCATTAA TTCGTTCGACTTGCA TERM 314 380902 - 380864 - H 86 -10.1 -3.56092 | gap 1, opp_overlap 380870, overlap 380867 380870 CTACTATCTTTTAAA TCA-TAATTTTAATTTTG GTGG CAAAATTAAAATTATTGA AACTACTATAATAAT TERM 315 380898 - 380867 - H 93 -12 -2.91144 | opp_overlap 380870, overlap 380864 380870 CTATCTTTTAAATCA TAATTTTAATTTTG GTGG CAAAATTAAAATTA TTGAAACTACTATAA TERM 316 380870 - 380895 + H 84 -9.3 -3.63991 | opp_overlap 380870 380867 380864 TCTTTTAAATCATAA TTTTAATTTTG GTGG CAAAATTAAAA TTATTGAAACTACTA TERM 317 380895 - 380870 - H 84 -9.3 -3.60151 | opp_overlap 380870, overlap 380867 380864 TCTTTTAAATCATAA TTTTAATTTTG GTGG CAAAATTAAAA TTATTGAAACTACTA TERM 318 381158 - 381210 + H 100 -13.7 -3.1005 | opp_overlap 381175, overlap 381175 TTCCTACATCTTAGC CTATTCCTTATATCAAACTCAGGAT ATA AACCAGAGTTTGATATAAGGAAAAA TGTTGGAATATATTT TERM 319 381338 - 381350 + H 72 -6.3 -4.42386 | overlap 381341 AAAGTTAATATGATT TCTCT GGT AGAGA TTTTCTGGATAACAG OTT_0371 382069 - 382227 + | hypothetical protein OTT_0372 382361 - 382633 + | putative conjugative transfer protein TraB TERM 320 384812 - 384826 + F 71 -7.2 -3.82604 | TTTTTAGTTTCAGTT TTGCTA ATT TAGCAA TTCTTGATTGAATGG TERM 321 384904 - 384890 - g 74 -4.2 -5.24531 | opp_overlap 384897 ATTTTCTAGAAAAAA TGCGAG CTG CTAGCA AGATTGCAGCATCTA TERM 322 385006 - 385022 + G 73 -7.9 -3.63627 | overlap 385002 385020 385021 TACATTATCTCGCAT GGAGCAG TTC CAGCTCC TTTAGGATATAAAGG map 384838 - 385644 + | methionine aminopeptidase OTT_0375 387056 - 386796 - | transposase OTT_0374 386341 - 386847 + | transposase clpP 387626 - 388246 + | ATP-dependent Clp protease proteolytic subunit TERM 323 390312 - 390328 + G 73 -8.1 -3.46081 | opp_overlap 390311 390308 390312, overlap 390295 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCATTAATTGAGTC OTT_0377 389631 - 390506 + | transposase OTT_0378 391151 - 391984 + | hypothetical protein TERM 324 392058 - 392027 - f 100 -12.6 -4.90917 | opp_overlap 392027 AAATTTAACTAAAAA TAATCATATTGCCA TTTA TAGCAATATGATTA TTTTTAGTTATAATA TERM 325 392027 - 392058 + F 100 -10.4 -4.94972 | opp_overlap 392027 AAATTTAACTAAAAA TAATCATATTGCCA TTTA TAGCAATATGATTA TTTTTAGTTATAATA TERM 326 393134 - 393146 + G 74 -6.3 -4.35926 | opp_overlap 393145 GTTTTAATTCTCGAG TCTTG CTA CAAGA TTTTAGCTTTAAAAT abcT1 392119 - 393786 + | ABC transporter ATP-binding protein TERM 327 394094 - 394084 - g 80 -5.4 -5.28176 | TTTATCTACAAAAAA TTGC AGA GCAA GGAGAAACATATCAT OTT_0380 393819 - 394190 + | hypothetical protein TERM 328 395473 - 395448 - g 79 -8.4 -3.99013 | opp_overlap 395448 CAAAAATCTGATAAA TCTCTGCCAA TTATCC TTGGCAAAGA TTTAAGTGGTGAGCC ftsK 394281 - 396569 + | cell division protein FtsK TERM 329 397640 - 397624 - g 73 -8.1 -3.54574 | overlap 397633 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 330 397786 - 397811 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 397786 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_0382 397186 - 398148 + | transposase TERM 331 398142 - 398192 + T 100 -13.3 -4.84262 | opp_overlap 398142 398146 398149 398152, overlap 398146 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 332 398192 - 398142 - T 100 -13.3 -2.84098 | opp_overlap 398142 398146, overlap 398146 398149 398152 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 333 398146 - 398188 + T 91 -8.3 -4.91657 | opp_overlap 398146 398142 398149 398152, overlap 398142 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 334 398188 - 398146 - T 80 -8.3 -4.10331 | opp_overlap 398142 398146, overlap 398142 398149 398152 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_0383 399036 - 398596 - | transposase TERM 335 399158 - 399118 - R 86 -9.3 -3.75479 | opp_overlap 399118 399129, overlap 399110 TAAAAGTTAACACAA GTTAGTAGTAAGTTCTATA AAA TATAGAAGTTACTAACAAC TAACTTTTCTTCTTC OTT_0384 399617 - 399228 - | transposase atpF 400444 - 399980 - | ATP synthase B chain precursor atpX 400954 - 400457 - | ATP synthase B chain atpE 401186 - 400962 - | ATP synthase C chain atpB 401970 - 401242 - | ATP synthase A chain TERM 336 401376 - 401362 - G 72 -8.6 -3.15236 | TAAAGCTATAGGTAA TGGCTT AAA AAGCCA AGTTAAACTAACAAT OTT_0389 403317 - 403991 + | hypothetical protein ppdK 407889 - 405184 - | phosphate dikinase precursor TERM 337 406322 - 406337 + g 70 -6.2 -4.31379 | AATACTTTACCACTG TTACCA TCTA TGGTAA TTTTACTGCCTTGAT TERM 338 408631 - 408608 - H 70 -5.4 -4.57073 | opp_overlap 408608 CACGCTTTTCAAAAA GTATATAACA TAAC TGTTTTATAC TGGTTTAGCTATATA OTT_0391 409532 - 410122 + | hypothetical protein OTT_0392 410134 - 411795 + | hypothetical protein TERM 339 411883 - 411933 + F 71 -7.3 -3.78329 | gap 1, opp_overlap 411882 411891, overlap 411886 411890 411891 411893 AGTATCAGGCAAAAG CTA-TACAAGAGATAATATACAGT TAGA ATTGTATATTATCTCGTATATTAG TTTCAATTAATAACA TERM 340 411886 - 411929 + F 80 -9.2 -3.57507 | opp_overlap 411882 411891, overlap 411883 411890 411891 411893 ATCAGGCAAAAGCTA TACAAGAGATAATATACAGT TAGA ATTGTATATTATCTCGTATA TTAGTTTCAATTAAT TERM 341 411890 - 411925 + F 83 -10 -3.23532 | opp_overlap 411882 411891, overlap 411886 411883 411891 411893 GGCAAAAGCTATACA AGAGATAATATACAGT TAGA ATTGTATATTATCTCG TATATTAGTTTCAAT TERM 342 411891 - 411924 + F 100 -13.5 -2.53396 | opp_overlap 411882 411891, overlap 411890 411886 411883 411893 GCAAAAGCTATACAA GAGATAATATACAGT TAGA ATTGTATATTATCTC GTATATTAGTTTCAA TERM 343 411924 - 411891 - f 93 -11.3 -3.59984 | opp_overlap 411891 411890 411886 411883 411893, overlap 411882 GCAAAAGCTATACAA GAGATAATATACAGT TAGA ATTGTATATTATCTC GTATATTAGTTTCAA TERM 344 411893 - 411922 + F 83 -10.3 -2.79677 | opp_overlap 411891 411882, overlap 411891 411890 411886 411883 AAAAGCTATACAAGA GATAATATACAGT TAGA ATTGTATATTATC TCGTATATTAGTTTC OTT_0393 412409 - 413194 + | exodeoxyribonuclease III OTT_0394 413691 - 413236 - | putative conjugative transfer protein TraD OTT_0395 413970 - 415286 + | putative conjugative transfer protein TraA OTT_0396 415271 - 415981 + | putative conjugative transfer protein TraA OTT_0397 415996 - 416820 + | putative conjugative transfer protein TraA OTT_0398 418504 - 416849 - | ankyrin repeat-containing protein 10_01 TERM 345 418557 - 418524 - H 95 -10.7 -4.13767 | TTTGTCACCCTAAAA TATTTATCAATCTAA TATA TTAAATTGATAAATA AAGCAATGCGATTAT OTT_0399 418665 - 419783 + | putative conjugative transfer protein TraI TERM 346 420297 - 420287 - g 74 -3.2 -5.48028 | GAAATAAAAAGAAAA GCAA CTG CTGC ACTAGTTCATTTTAT OTT_0400 419768 - 420832 + | putative transposase TERM 347 420854 - 420820 - T 79 -6.7 -4.67173 | opp_overlap 420821 420826, overlap 420817 420822 TAATTTAAAAAATAA CATAGAGTATTAATT TTTCG AATTAATACTCTACT AACTTAAGTTTTTTG TERM 348 420821 - 420853 + T 70 -8.7 -2.61943 | opp_overlap 420820 420817 420822, overlap 420826 AATTTAAAAAATAAC ATAGAGTATTAATTT TTC GAATTAATACTCTAC TAACTTAAGTTTTTT TERM 349 420852 - 420822 - T 95 -11.5 -3.92369 | opp_overlap 420821 420826, overlap 420820 420817 ATTTAAAAAATAACA TAGAGTATTAATT TTTCG AATTAATACTCTA CTAACTTAAGTTTTT OTT_0401 422596 - 420842 - | putative conjugative transfer protein TraD TERM 350 422045 - 422068 + g 73 -8.2 -3.38674 | overlap 422044 CTTTACTAATGGCAA GCCTCCAAAA CAGA TTTTCGAGGC CTTTTTAGCGCTTTT OTT_0402 423741 - 422602 - | TPR repeat-containing protein 01_03 OTT_0403 426077 - 423750 - | putative conjugative transfer protein TraG TERM 351 425267 - 425212 - G 76 -8.6 -3.49653 | gap 1, opp_overlap 425212, overlap 425229 ATCATTCCTAGACAA TGGATTATTGTAAAAAATACTGGCCAG CTG CTGACCCATATTATTAACAA-AATCCA TGTTTTGAGTATGTT TERM 352 425251 - 425229 - G 75 -4.8 -5.06451 | opp_overlap 425212, overlap 425212 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAACAAAATCC TERM 353 426060 - 426049 - G 72 -5.8 -4.41422 | TTAGATACAAAATAA CTCG TTTG CGAG GAAAGAGAAGCAAAC TERM 354 426116 - 426166 + r 100 -13.3 -2.84098 | opp_overlap 426116 426120, overlap 426120 426123 426126 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 355 426166 - 426116 - R 100 -13.3 -4.84262 | opp_overlap 426116 426120 426123 426126, overlap 426120 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 356 426162 - 426120 - R 91 -8.3 -4.91657 | opp_overlap 426120 426116 426123 426126, overlap 426116 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 357 426120 - 426162 + r 80 -8.3 -4.10331 | opp_overlap 426116 426120, overlap 426116 426123 426126 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0404 427122 - 426160 - | transposase TERM 358 426522 - 426497 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 426497 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 359 426668 - 426684 + g 73 -8.1 -3.54574 | overlap 426665 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0405 427634 - 427299 - | putative conjugative transfer protein TraG OTT_0406 428935 - 427634 - | putative conjugative transfer protein TraH OTT_0407 429637 - 429011 - | putative conjugative transfer protein TraF OTT_0408 430833 - 429634 - | putative conjugative transfer protein TraN OTT_0409 431324 - 430884 - | putative conjugative transfer protein TraN OTT_0410 431641 - 431321 - | putative conjugative transfer protein TrbC OTT_0411 432409 - 431726 - | putative conjugative transfer protein TraU TERM 360 432579 - 432554 - RH 72 -4.9 -4.83169 | ATGTTTTGAGAAAAA TATGATTTTGT TAAT AAAAAATCATA TAAAATAATTAAAAA OTT_0413 434882 - 433728 - | putative conjugative transfer protein TraC OTT_0412 432777 - 433814 + | ankyrin repeat-containing protein 05_02 OTT_0414 435300 - 434980 - | hypothetical protein OTT_0415 436628 - 435300 - | putative conjugative transfer protein TraB TERM 361 435474 - 435494 + g 74 -6.1 -4.3739 | CGCAATAAGAACGAC CGGGCTCAT AGA ATCAGCTCG TTTTATAGCAAAATC OTT_0416 437000 - 436671 - | hypothetical protein OTT_0417 437621 - 437145 - | hypothetical protein OTT_0418 438170 - 437751 - | putative conjugative transfer protein TraE OTT_0419 438493 - 438170 - | hypothetical protein OTT_0420 439212 - 438829 - | putative integrase OTT_0421 439659 - 439453 - | putative integrase OTT_0422 440023 - 439613 - | putative integrase OTT_0423 440800 - 440441 - | transposase spo0J 441975 - 441094 - | Spo0J protein TERM 362 441172 - 441186 + g 86 -7.2 -4.85894 | CCCTCCATGATTTGA GTTTTC AAT GAAAAC TTTTGTATTTAATTT TERM 363 441730 - 441740 + g 71 -5.4 -4.64676 | TATAATATATTTGCT CTGA TCT TCAG TTTTGTTAACAATGA soj 442784 - 441987 - | Soj protein gidB 443387 - 442791 - | glucose inhibited division protein B TERM 364 443457 - 443494 + H 93 -11.7 -2.78925 | opp_overlap 443458 443465 443468, overlap 443452 443465 443468 TATAATGAATATCAT ATTATAAATAATGTTTC ACGT GAAACATTATTTATAAA TCACTTTGTTATAAT TERM 365 443493 - 443458 - H 100 -15.2 -2.95208 | opp_overlap 443457 443452 443465 443468, overlap 443465 443468 ATAATGAATATCATA TTATAAATAATGTTTC ACGT GAAACATTATTTATAA ATCACTTTGTTATAA TERM 366 443486 - 443465 - H 84 -8.9 -4.0348 | opp_overlap 443465 443457 443452 443468, overlap 443458 443468 ATATCATATTATAAA TAATGTTTC ACGT GAAACATTA TTTATAAATCACTTT TERM 367 443465 - 443486 + H 84 -8.9 -3.93984 | opp_overlap 443458 443465 443468, overlap 443457 443452 443468 ATATCATATTATAAA TAATGTTTC ACGT GAAACATTA TTTATAAATCACTTT TERM 368 443483 - 443468 - H 70 -6.2 -4.1337 | opp_overlap 443468 443465 443457 443452, overlap 443465 443458 TCATATTATAAATAA TGTTTC ACGT GAAACA TTATTTATAAATCAC TERM 369 443468 - 443483 + H 70 -6.2 -4.09117 | opp_overlap 443465 443458 443468, overlap 443465 443457 443452 TCATATTATAAATAA TGTTTC ACGT GAAACA TTATTTATAAATCAC TERM 370 444001 - 443983 - g 74 -7.5 -3.93251 | CTAAAAGAAAATGAA CTTCCAA TAGTC TTGGAAG CAAGAATGAGTGAAT tatC 443533 - 444300 + | sec-independent protein translocase protein TatC TERM 371 445037 - 445019 - g 77 -4.6 -5.22006 | opp_overlap 445018, overlap 445020 TTATTAGAAGAAAAA TTACCAAT AAG ATTGGTAG CGTTTACTCCTTGCT TERM 372 445036 - 445020 - g 75 -8.1 -3.72119 | opp_overlap 445018, overlap 445019 TATTAGAAGAAAAAT TACCAAT AAG ATTGGTA GCGTTTACTCCTTGC serS 444278 - 445567 + | seryl-tRNA synthetase OTT_0429 446426 - 445569 - | hypothetical protein TERM 373 447537 - 447508 - g 71 -7.5 -3.3972 | gap 1, opp_overlap 447508 447506 CGATAAAATCATTAA TGATAATTGTT-AT TCT ATCAACAATTATCA TATTATTATTACATC TERM 374 447508 - 447537 + G 73 -7.5 -3.57389 | gap 1, opp_overlap 447508, overlap 447506 CGATAAAATCATTAA TGATAATTGTT-AT TCT ATCAACAATTATCA TATTATTATTACATC TERM 375 447886 - 447903 + G 74 -5.7 -4.5774 | GGTATTGGGGAGCAG TTATTAC ACCA GTAATAA TTTTAGTTATTGGTA tlc2 446793 - 448325 + | ADP,ATP carrier protein homolog TERM 376 448344 - 448323 - f 77 -3.1 -5.64873 | opp_overlap 448327, overlap 448316 448327 GCTAATAATAAAAAA TAAATAACT TTTT AGTTATATA ATTAATATTATTTCC TERM 377 448340 - 448327 - f 74 -3.9 -5.22768 | opp_overlap 448327, overlap 448316 448323 ATAATAAAAAATAAA TAACT TTTT AGTTA TATAATTAATATTAT TERM 378 450717 - 450729 + G 72 -4.9 -4.84017 | opp_overlap 450717 AATTCATGACTCAAA TGATA AAT TATCA TTTTTATACAAGATT mutS 448378 - 451047 + | DNA mismatch repair protein MutS secF 451126 - 452052 + | protein-export membrane protein SecF OTT_0433 453115 - 452468 - | transposase TERM 379 453910 - 453925 + H 72 -4.8 -4.95167 | opp_overlap 453910 CTATAAAGTGTAGAA GTTAAT AAAA ATTAAC TTTTCTTCTTCCTTA OTT_0434 454018 - 454284 + | transposase prfB 454731 - 454471 - | peptide chain release factor RF-2 TERM 380 454515 - 454531 + g 84 -2.3 -6.25242 | AGCGGCTAGGCAAGG TAGTTTT CAT AGAGCTA TTTTTTTTTAGTTCT TERM 381 454545 - 454559 + g 79 -2.8 -5.76949 | overlap 454547 TATTTTTTTTTAGTT CTCTTT CAT AAAGTG TTTTTTTTAAGGATA OTT_0436 455599 - 454856 - | alpha/beta hydrolase superfamily protein TERM 382 455162 - 455172 + g 70 -4 -5.11063 | CAGATACGGTGCTTT TTGA TTA TCAA TTTTTATTGCATAAT TERM 383 456533 - 456550 + r 87 -2.7 -6.17268 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTTATTATCC OTT_0437 456738 - 456541 - | RelA/SpoT-related protein OTT_0438 457852 - 456995 - | hypothetical protein TERM 384 457152 - 457162 + g 71 -5.4 -4.68724 | opp_overlap 457152 457150 ACCAAGTCAAAATGA GCTA ATT TAGC TTTTATATTCCCTAA OTT_0439 458602 - 457874 - | hypothetical protein TERM 385 458873 - 458853 - H 75 -5.5 -4.86862 | CCGAAAAAAGCAAAA TATCTCTCA AAA TGAGATATA CAATTGATCCTGAGT OTT_0440 459503 - 461008 + | repeat-containing protein B TERM 386 461764 - 461783 + F 70 -2.2 -5.38348 | opp_overlap 461758 461777, overlap 461758 461775 461777 AGCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT OTT_0441 462136 - 462768 + | N6 adenine-specific DNA-methyltransferase OTT_0442 463997 - 462954 - | hypothetical protein TERM 387 463142 - 463120 - G 71 -7 -4.1399 | overlap 463122 TTACTTATATACAAA TATGATGGAG CAT CTCCATCACG TAGATCATAAGAGTA TERM 388 463140 - 463122 - G 95 -11.8 -3.66398 | overlap 463120 ACTTATATACAAATA TGATGGAG CAT CTCCATCA CGTAGATCATAAGAG OTT_0443 465724 - 465861 + | hypothetical protein OTT_0444 467531 - 466557 - | hypothetical protein TERM 389 467660 - 467631 - R 74 -8.7 -3.30214 | opp_overlap 467639 AATTCACTACATTAA CCACCTATTAAAC TTTA GTTTATTAGGTAG CATAAAGCTCACAGT OTT_0445 467808 - 467653 - | RelA/SpoT-related protein OTT_0446 468240 - 467848 - | RelA/SpoT-related protein TERM 390 468323 - 468373 + r 100 -13.3 -2.84098 | opp_overlap 468323 468327, overlap 468327 468330 468333 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 391 468373 - 468323 - R 100 -13.3 -4.84262 | opp_overlap 468323 468327 468330 468333, overlap 468327 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 392 468369 - 468327 - R 91 -8.3 -4.91657 | opp_overlap 468327 468323 468330 468333, overlap 468323 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 393 468327 - 468369 + r 80 -8.3 -4.10331 | opp_overlap 468323 468327, overlap 468323 468330 468333 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0447 469329 - 468367 - | transposase TERM 394 468729 - 468704 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 468704 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 395 468875 - 468891 + g 73 -8.1 -3.54574 | overlap 468872 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0448 470021 - 469506 - | hypothetical protein OTT_0449 470504 - 470040 - | hypothetical protein OTT_0450 471056 - 470565 - | hypothetical protein TERM 396 470624 - 470635 + g 70 -4.4 -4.76274 | overlap 470620 470622 AATTAAGTATTCTTG CTAC GCTA GTAG TTTTATATTCCTTTA TERM 397 471071 - 471085 + r 70 -2.9 -5.20328 | TATTATTCTCCTATG GTTAA GTTTA TTAAC TTTGTTTTTTTAGAA OTT_0451 471939 - 471271 - | hypothetical protein OTT_0452 472885 - 472460 - | RelA/SpoT-related protein OTT_0453 474555 - 473119 - | replicative DNA helicase TERM 398 473365 - 473395 + g 95 -8.5 -4.98522 | gap 1, opp_overlap 473365 GTCCTGTTCAATTGA GCCTGATTCTCTTA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT TERM 399 473460 - 473475 + g 80 -7.6 -4.1721 | opp_overlap 473472, overlap 473465 TGACTGGAATATTGA GCTCTT TAGC AAGAGC TTTTAAGCTCTGACT TERM 400 475570 - 475551 - H 74 -2.2 -5.69023 | opp_overlap 475542 475564, overlap 475542 475540 475564 AAAAGATGAAAAAAA TTTTTCAT AATT ATGACAAA AAGTCATGTACTGAT TERM 401 476743 - 476762 + G 70 -7.2 -3.74747 | opp_overlap 476752 GTTGGATTTACTTTA GGTAATGC ATCA GCATTATC TTTAATGCAAATTAC bcr2 475774 - 476955 + | drug resistance transporter, Bcr/CflA family protein OTT_0455 477361 - 477119 - | transposase TERM 402 477277 - 477318 + g 90 -9.7 -4.26019 | gap 1, opp_overlap 477267 477277 ATAAAGCTTTTGAAA TGACTAAAGCTGCAGATAAG TCA CTTTTAT-CAGCTTTAGTCA TTTTAACTGTCATTA TERM 403 477318 - 477277 - G 80 -9.7 -3.56862 | gap 1, opp_overlap 477277, overlap 477267 ATAAAGCTTTTGAAA TGACTAAAGCTGCAGATAAG TCA CTTTTAT-CAGCTTTAGTCA TTTTAACTGTCATTA TERM 404 477400 - 477390 - H 82 -5.4 -5.39721 | TGAGTATAGAAAAAA GCTA CAA TAGC CTCATCATAAGATTT TERM 405 478385 - 478368 - H 95 -4.1 -6.41881 | opp_overlap 478368 478369, overlap 478369 GATAATAAAAAAAAA TCTGTTC TAGA GAACAGT ATTCATAAAGCTCTT TERM 406 478384 - 478369 - H 78 -7.6 -4.41468 | opp_overlap 478368 478369, overlap 478368 ATAATAAAAAAAAAT CTGTTC TAGA GAACAG TATTCATAAAGCTCT OTT_0456 478909 - 479490 + | putative conjugative transfer protein TraU OTT_0457 480120 - 480446 + | reverse transcriptase OTT_0458 481689 - 480607 - | hypothetical protein TERM 407 481163 - 481177 + g 84 -3.6 -5.78622 | GAATATAGTTGCCTT TCTAAT TCG GTTAGA TTTTTTTTAACATAG TERM 408 482115 - 482135 + r 88 -9.1 -4.55128 | opp_overlap 482114 TCTTTATTTGAAATG TGGAGAGAA ATC TTCTCTTCA TTTTACTTTAGAAAT OTT_0459 482853 - 482167 - | ankyrin repeat-containing protein 11 TERM 409 482799 - 482827 + g 100 -13.3 -2.91429 | overlap 482801 CATTTAAACTTTCAG CAGCATGATGC AATTGAG GCATCATGCTG TGTCTCGGGCTTTTA TERM 410 482801 - 482825 + g 81 -10.1 -3.00215 | overlap 482799 TTTAAACTTTCAGCA GCATGATGC AATTGAG GCATCATGC TGTGTCTCGGGCTTT TERM 411 483214 - 483191 - R 70 -5.4 -4.57073 | opp_overlap 483191 TACGCTTTTCAAAAA GTATATAACA TAAT TGTTTTATAC TAGTTTAGCTATATA TERM 412 483859 - 483846 - R 74 -3.9 -5.23316 | TATGACACTAAAAAA TAGAT ATAA ATCTA ATAGTAAAGCAGATA sca3 486066 - 484504 - | cell surface antigen TERM 413 485925 - 485943 + g 80 -7.5 -4.34267 | CATCTTCTTTATGTA TATCCTC TGCCT GAGGATA TTTTCCCTTCTCTGG TERM 414 486024 - 486006 - G 75 -2.5 -5.52384 | CTGTTATTAAAAAAA TCAGTAA TGCCT TTACTAA GTGATGCATAAATAT OTT_0461 486245 - 486484 + | hypothetical protein TERM 415 486526 - 486560 + T 70 -8.2 -3.02187 | opp_overlap 486534, overlap 486530 486534 486555 TTTTTACCAACAGCG TTAATAAGGTTAATTT ACA AACTTAACTTTATTAA TCTAATATTTTAAGT OTT_0462 487176 - 486910 - | hypothetical protein OTT_0463 488385 - 487195 - | hypothetical protein TERM 416 488088 - 488078 - G 95 -5.4 -5.97575 | AACTCAGAAAAAAAA TCTG CAC CAGA TACGCTGTAATTTGG OTT_0464 490306 - 488519 - | hypothetical protein TERM 417 490990 - 490972 - H 71 -4.6 -4.82901 | overlap 490974 TCCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 418 491088 - 491053 - g 87 -11.4 -3.02043 | opp_overlap 491061 491062, overlap 491062 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA GGGACATATATAGAT TERM 419 491061 - 491080 + G 75 -5 -5.00884 | opp_overlap 491053 491062, overlap 491062 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 420 491062 - 491079 + G 77 -8.5 -3.60048 | opp_overlap 491062 491053, overlap 491061 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 421 491079 - 491062 - g 89 -8.5 -4.56883 | opp_overlap 491061 491062, overlap 491053 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 422 491129 - 491115 - g 84 -3.6 -5.77988 | AGATATATAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAG TERM 423 491209 - 491183 - g 76 -5.4 -4.96523 | opp_overlap 491183 491186, overlap 491178 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACGAACCTC OTT_0465 491052 - 491243 + | hypothetical protein OTT_0466 491475 - 491735 + | hypothetical protein TERM 424 491747 - 491725 - f 72 -5.7 -4.58283 | TAAGTTGCTTAAAAA TATCACACT AACAG AATGTGATA GATCAAAGATATTAC OTT_0467 491777 - 492145 + | hypothetical protein OTT_0468 492154 - 492633 + | replicative DNA helicase TERM 425 493260 - 493245 - T 77 -7.6 -4.1721 | opp_overlap 493235 ACTCAGAGCTTAAAA GCTCTT GCTA AAGAGC TCAATATTTCAATAA OTT_0469 494022 - 493675 - | repeat-containing protein A_02 OTT_0470 494588 - 494962 + | transposase OTT_0471 494949 - 495083 + | transposase OTT_0472 495140 - 495514 + | transposase OTT_0473 495501 - 496007 + | transposase TERM 426 497038 - 497024 - g 74 -8.6 -3.25459 | opp_overlap 497021 497017, overlap 497022 ACTAACGCCAGAAGA TGCAGT TAT ACTGCA ACGTATGTCTAGTAG TERM 427 497617 - 497601 - g 72 -7.3 -3.80858 | opp_overlap 497601 497597 TCAGAACTTAGTAAA GAGCTAG GAT CTAACTC TATATTGTTCAAAGT OTT_0474 496971 - 497747 + | hypothetical protein TERM 428 497803 - 497782 - f 80 -8.9 -3.51837 | opp_overlap 497785, overlap 497780 ATATAAGGAAGAAGA GAAGTTAAT TTTT ATTAACTTC TACACTTTATAGAAC TERM 429 498074 - 498063 - f 70 -3 -5.33785 | AATTAGTATAAAAAA TTTG ATAT CAAA AAAAGCATAATTTAT TERM 430 498796 - 498784 - g 74 -6.3 -4.45115 | overlap 498781 498786 ATTAATAGAAAACAA TCCTA CTC TAGGA ATAGAGCAGCATAAA OTT_0475 498155 - 499177 + | putative integrase OTT_0476 500019 - 499717 - | hypothetical protein OTT_0477 500003 - 501142 + | reverse transcriptase OTT_0478 501636 - 501785 + | hypothetical protein OTT_0479 501785 - 501928 + | putative conjugative transfer protein TraE OTT_0480 502015 - 502338 + | putative conjugative transfer protein TraE OTT_0481 502335 - 502637 + | hypothetical protein OTT_0482 502637 - 502741 + | hypothetical protein OTT_0483 502841 - 503080 + | putative conjugative transfer protein TraB OTT_0484 503043 - 503312 + | putative conjugative transfer protein TraB OTT_0485 503312 - 503641 + | hypothetical protein OTT_0487 506360 - 505323 - | ankyrin repeat-containing protein 05_03 OTT_0486 503622 - 505409 + | putative conjugative transfer protein TraC TERM 431 506558 - 506583 + FH 72 -4.9 -4.83169 | TTTTTAATTATTTTA TATGATTTTTT ATTA ACAAAATCATA TTTTTCTCAAAACAT OTT_0488 506728 - 507411 + | putative conjugative transfer protein TraU OTT_0489 507496 - 507816 + | putative conjugative transfer protein TrbC OTT_0490 507813 - 508253 + | putative conjugative transfer protein TraN OTT_0491 508304 - 509503 + | putative conjugative transfer protein TraN OTT_0492 509500 - 510126 + | putative conjugative transfer protein TraF OTT_0493 510202 - 511503 + | putative conjugative transfer protein TraH OTT_0494 511503 - 511838 + | putative conjugative transfer protein TraG TERM 432 512469 - 512453 - g 73 -8.1 -3.54574 | overlap 512462 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 433 512615 - 512640 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 512615 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_0495 512009 - 512977 + | transposase TERM 434 513021 - 512971 - T 100 -13.3 -2.84098 | opp_overlap 512971 512975, overlap 512975 512978 512981 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 435 512971 - 513021 + T 100 -13.3 -4.84262 | opp_overlap 512971 512975 512978 512981, overlap 512975 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 436 512975 - 513017 + T 91 -8.3 -4.91657 | opp_overlap 512971 512975 512978 512981, overlap 512971 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 437 513017 - 512975 - T 80 -8.3 -4.10331 | opp_overlap 512975 512971, overlap 512971 512978 512981 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_0496 513583 - 512993 - | putative integrase OTT_0497 514551 - 515081 + | hypothetical protein TERM 438 515458 - 515475 + F 71 -4.1 -5.08824 | opp_overlap 515474 AGGCTAATAGCCTGT GCTAGAT AAGT AACTAGC TTTTTTAACTAAAAA OTT_0498 515568 - 515780 + | transposase TERM 439 516180 - 516168 - g 74 -6.3 -4.35017 | opp_overlap 516168 TAAAAATTGAACAAA TGATC AAT GATCA TATTAAGAATAATAA OTT_0499 516167 - 516367 + | transposase TERM 440 516770 - 516786 + T 70 -2.3 -5.38951 | overlap 516767 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTT_0500 517385 - 516888 - | transposase TERM 441 517971 - 517943 - g 77 -4 -5.46657 | CATTTCAACAAAAAA TTATTCCCCAAA AGATA TTTGCGAAATAA TAAGTAGATGGAAAG TERM 442 519516 - 519466 - g 86 -11.4 -2.94704 | overlap 519461 CAATAATACATTATA GCAGTGCTGCTAATAACAACTATT TTC AAAAATTATCATCAGCAGCAGTGC CTAATTCCCAATCTA uvrD 517545 - 519695 + | DNA helicase II OTT_0502 520445 - 519687 - | transposase OTT_0503 521894 - 521541 - | transposase OTT_0504 522880 - 522050 - | hypothetical protein TERM 443 522796 - 522768 - G 80 -10.5 -2.77523 | opp_overlap 522767 522768 522771 TGCTGATTAATATCA TTAGTAGAACTTA TAC TACGTTCTACTAA ATTGTCAGACTTGCT TERM 444 522768 - 522796 + g 80 -10.5 -2.59921 | opp_overlap 522768, overlap 522767 522771 TGCTGATTAATATCA TTAGTAGAACTTA TAC TACGTTCTACTAA ATTGTCAGACTTGCT TERM 445 523242 - 523228 - H 93 -4.4 -6.00086 | opp_overlap 523230 ATATGACAAAAAAAA TATAAT GCA ATTATA CTCTAAAACCTGATA TERM 446 523599 - 523585 - H 80 -5.8 -5.01845 | opp_overlap 523585 523584 GACAATAACTAAAAA TATAGT ACC ACTATA ATTATTTTATTTTTA OTT_0505 523699 - 525150 + | sensor histidine kinase/response regulator/transporter hybrid protein TERM 447 525160 - 525147 - f 71 -2.4 -5.5604 | TGAATTAACAAAAAA CTAG GCAACA CTAG AGTTTGATATTTATA TERM 448 526169 - 526152 - g 82 -9.9 -3.23572 | overlap 526150 ATGTATCTGATAATA TTCCAGG AATT CCTGGAA TTGGCCCTAAGACTG TERM 449 526184 - 526213 + G 81 -10.2 -3.15961 | opp_overlap 526193 ATTGGCCCTAAGACT GCTATTAAACTG CTGGAA CAGTTTGATAGC TTAAATAATATTTTG polA 525584 - 528253 + | DNA polymerase I (POL I) TERM 450 528363 - 528351 - g 73 -7.7 -3.73953 | opp_overlap 528343 AGCATTGGTAGGAAA GCCAA ACG TTGGC AAATCTACTTTATTT OTT_0507 528319 - 529683 + | GTP-binding protein, Era/Obg family OTT_0508 529692 - 530375 + | hypothetical protein OTT_0509 530446 - 531519 + | AFG1-like ATPase tmk 531512 - 532165 + | thymidylate kinase gidA 534178 - 532310 - | glucose inhibited division protein A TERM 451 532382 - 532394 + g 80 -7.7 -4.33956 | TGCCATAATTGCTGA TGGAG TTA CTCCA TTTATATGTTTTGCA TERM 452 532419 - 532433 + g 71 -8.6 -2.79139 | TTTGCAGCTCTTATA GTCTCA GGT TGAGAC TGCTTAAGCTTTTCT OTT_0512 536101 - 534818 - | hypothetical protein TERM 453 535077 - 535067 - G 85 -6.8 -5.03994 | opp_overlap 535067 GCTTATAGAGAAAAA GCGT GCA ACGC TAAGTTCAAAGTAAT OTT_0513 537298 - 537149 - | putative integrase TERM 454 537828 - 537802 - R 71 -7.5 -3.52874 | gap 1, opp_overlap 537801, overlap 537800 GTTGACAGAACAATA TGTTTAATCAGC TCTT GCTG-TTAAACA ATCATATACATAACT rho 539551 - 538046 - | transcription termination factor Rho TERM 455 538398 - 538414 + g 90 -8.1 -4.84017 | ATATTACGAGCTGCT CCAAAAA AGC TTTTTGG TTTTTGTAAAGCATT TERM 456 540832 - 540869 + H 85 -10.1 -3.34109 | overlap 540835 TATTATATTTTTTAT CAACATGTGGATAGTTT ATTT ATATTATCTACATGTTG TTAATATATACATTT hemE 541040 - 542068 + | uroporphyrinogen decarboxylase TERM 457 542125 - 542135 + G 84 -5.4 -5.41941 | overlap 542128 CAGATAAAATTGAAT CTGT TAA ACAG TTTTTGTTTAATTTG TERM 458 542128 - 542146 + G 74 -5.4 -4.80453 | overlap 542125 ATAAAATTGAATCTG TTAAACAG TTT TTGTTTAA TTTGTTTTATGATAA TERM 459 542286 - 542245 - g 100 -9.8 -5.24531 | opp_overlap 542252 542257, overlap 542252 AGTCTTCACAAAAAA TTTATAATAAAATTGGAG GTAAAT CTCCAATTTTATTTCAAA CAACTTTACAAGCTG TERM 460 542279 - 542252 - g 86 -10.1 -3.60344 | opp_overlap 542252 542257, overlap 542245 ACAAAAAATTTATAA TAAAATTGGAG GTAAAT CTCCAATTTTA TTTCAAACAACTTTA TERM 461 542252 - 542279 + G 87 -10.8 -3.54935 | opp_overlap 542252 542245, overlap 542257 ACAAAAAATTTATAA TAAAATTGGAGG TAAA TCTCCAATTTTA TTTCAAACAACTTTA TERM 462 542257 - 542274 + G 80 -6.3 -4.86731 | opp_overlap 542252 542245, overlap 542252 AAATTTATAATAAAA TTGGAGG TAAA TCTCCAA TTTTATTTCAAACAA hemH 542061 - 543095 + | probable ferrochelatase TERM 463 543259 - 543277 + G 71 -7.5 -3.43217 | opp_overlap 543259 543258 TACAATGGAAAGAAG GCTCATA TTTAT TATGAGC TTATCAATGTTACTA OTT_0517 543104 - 543538 + | hypothetical protein OTT_0518 543957 - 544184 + | reverse transcriptase OTT_0519 544569 - 544877 + | transposase OTT_0520 545868 - 545689 - | putative conjugative transfer protein TraI OTT_0521 546240 - 545995 - | putative conjugative transfer protein TraI OTT_0522 546880 - 546374 - | hypothetical protein OTT_0523 547472 - 547194 - | hypothetical protein OTT_0524 548034 - 547645 - | hypothetical protein OTT_0525 548577 - 548044 - | hypothetical protein OTT_0526 549834 - 548653 - | hypothetical protein OTT_0527 550680 - 550048 - | hypothetical protein OTT_0528 551087 - 550680 - | hypothetical protein OTT_0529 551587 - 551084 - | hypothetical protein OTT_0530 553494 - 551716 - | ABC transporter permease/ATP-binding protein TERM 464 552101 - 552089 - G 71 -7.7 -3.38118 | ACAAGCGAGTCATAA CCTTG TAG CAAGG CGGAGATAAACTCAT fabG 554243 - 553506 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 465 553840 - 553854 + g 78 -5.7 -4.85177 | overlap 553850 ATATTAATAATTGCC CCATG AATGC CATGG TTTTTCATGTGGTTT OTT_0532 554390 - 554860 + | transcriptional regulator (MarR family) TERM 466 555427 - 555415 - g 74 -7.7 -3.85891 | CAAAAACTTATTAAA GAACG CTA CGTTC ATGCTAAAGCCATCT OTT_0533 554857 - 555882 + | hypothetical protein TERM 467 555992 - 556005 + F 75 -9.5 -2.64462 | overlap 555987 GAGAGTCTTTTCCAA GCGGG CCAT CCCGC TGCATTATAATTATT OTT_0534 556452 - 556916 + | MutT/nudix family protein OTT_0535 556913 - 557458 + | hypothetical protein OTT_0536 557472 - 557888 + | hypothetical protein OTT_0537 558342 - 558728 + | hypothetical protein OTT_0538 558731 - 559207 + | aminoglycoside phosphotransferase OTT_0539 559706 - 559368 - | transposase OTT_0540 560289 - 559783 - | transposase OTT_0541 560650 - 560276 - | transposase OTT_0542 560985 - 561500 + | hypothetical protein TERM 468 562001 - 562013 + G 72 -4.8 -4.91473 | AGTTCATCTTAAATT GGAG CTGGA CTCC TTTGTTTTTCCATTA OTT_0543 561706 - 562200 + | DNA gyrase inhibitor TERM 469 563052 - 563033 - g 75 -5 -5.00642 | opp_overlap 563033 563035 GAAGTTATAGAAAAA TATCTTCC TGCA GGTAGATA TGCTGTTATTTCCAA OTT_0544 562769 - 563122 + | DNA gyrase inhibitor OTT_0545 563252 - 563797 + | hypothetical protein TERM 470 563961 - 563949 - g 77 -4.1 -5.48054 | ATCAAAATCAAAAAA CAAAG CAA CCTTG TGTTATAATAGCTTA OTT_0546 563876 - 564589 + | dienelactone hydrolase family protein TERM 471 564566 - 564578 + T 74 -2.7 -5.63504 | ATATCTATTAAGAAT TTTCT TGA AGAGA TTTTTTTATAGGATT OTT_0547 565460 - 564558 - | putative streptomycin-6-phosphotransferase OTT_0548 567109 - 565895 - | putative conjugative transfer protein TraI OTT_0549 568158 - 567376 - | putative conjugative transfer protein TraA OTT_0550 568925 - 568215 - | putative conjugative transfer protein TraA OTT_0551 570208 - 568910 - | putative conjugative transfer protein TraA OTT_0552 570504 - 570959 + | putative conjugative transfer protein TraD OTT_0553 571953 - 571027 - | hypothetical protein OTT_0554 572229 - 572074 - | RelA/SpoT-related protein OTT_0555 572661 - 572269 - | RelA/SpoT-related protein OTT_0556 573197 - 572703 - | hypothetical protein OTT_0557 573677 - 573216 - | hypothetical protein OTT_0558 574148 - 573738 - | hypothetical protein OTT_0559 574644 - 574156 - | hypothetical protein TERM 472 574828 - 574794 - R 88 -9.4 -4.39571 | opp_overlap 574793 574796, overlap 574796 574800 TTTAGAAATTTAAAA TAGCAAGCTTAGCTAA CAA TTAGCTAAGCTGACTG GTATATCACATATGG TERM 473 574796 - 574826 + r 78 -9.8 -2.69977 | opp_overlap 574796 574794 574800, overlap 574793 TAGAAATTTAAAATA GCAAGCTTAGCTAA CAA TTAGCTAAGCTGAC TGGTATATCACATAT TERM 474 574826 - 574796 - R 95 -12 -3.79633 | opp_overlap 574793 574796, overlap 574794 574800 TAGAAATTTAAAATA GCAAGCTTAGCTAA CAA TTAGCTAAGCTGAC TGGTATATCACATAT TERM 475 574822 - 574800 - R 100 -13.6 -3.55453 | opp_overlap 574796 574793, overlap 574796 574794 AATTTAAAATAGCAA GCTTAGCTAA CAA TTAGCTAAGC TGACTGGTATATCAC OTT_0560 575085 - 574834 - | hypothetical protein TERM 476 575028 - 575048 + g 84 -5.6 -5.40873 | GTAACAGTTTTGACT GTATATTT TTATT AAATATAC TTTTATTTTTCTGTT OTT_0561 575308 - 575862 + | hypothetical protein TERM 477 576164 - 576143 - g 78 -6.6 -4.4715 | TTTTAATTGATAAAA TGAACCCA ATAATA TGGGCTCA ACAAAATAATATCAC OTT_0562 576004 - 576777 + | hypothetical protein OTT_0563 577952 - 576930 - | replicative DNA helicase OTT_0564 579676 - 577961 - | hypothetical protein TERM 478 579188 - 579163 - G 73 -9.1 -2.93858 | opp_overlap 579176 579178 TATTATATCTATATA TGTACCTGAAA CTTT TTTCAGGTTCA CCTGAAATTTCTTTC TERM 479 579176 - 579219 + g 79 -4.9 -5.16572 | opp_overlap 579163, overlap 579178 TATGTACCTGAAACT TTTTTCAGGTTCA-CCTGAAA TTTC TTTCAGGTTGGAGC-GAAAAA TTTTTTGGGTTAGAT TERM 480 579178 - 579195 + g 88 -8.5 -4.46233 | opp_overlap 579163, overlap 579176 TGTACCTGAAACTTT TTTCAGG TTCA CCTGAAA TTTCTTTCAGGTTGG TERM 481 579261 - 579281 + g 95 -9.1 -5.08011 | TCTCCTTTTGTTTCT TTTTCAGTG AAA CGCTGAAAA TTTTTTAGAAGTTTT TERM 482 579314 - 579326 + g 81 -4.1 -5.68489 | ACATGGAACATTACG CAGCT TAA AGTTG TTTTTTATTATTGTC OTT_0565 580142 - 580534 + | transposase OTT_0566 580557 - 580787 + | transposase TERM 483 580905 - 580889 - gT 71 -2.3 -5.38951 | overlap 580896 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0567 580741 - 581037 + | transposase OTT_0568 581759 - 581415 - | putative ferredoxin, 2Fe-2S (andrenodoxin-like) TERM 484 581696 - 581684 - G 74 -9.1 -3.01745 | opp_overlap 581679, overlap 581679 CTTCTAATAATGACA GCCCA ATT TGGGC ATCAACTATTTTTTC hscA 583629 - 581776 - | chaperone protein HscA hscB 584119 - 583616 - | chaperone protein HscB hesB2 584506 - 584132 - | HesB protein iscU 584941 - 584516 - | NifU protein homolog spl1 586252 - 584981 - | NifS protein homolog spl1 587553 - 586267 - | NifS protein homolog OTT_0575 588011 - 587565 - | Rrf2 family protein TERM 485 587642 - 587654 + g 70 -6.3 -4.32571 | CATCCAAAGAGATTT CACTA AAG TAGTG TTTAATTTTATATTC OTT_0576 588215 - 588916 + | hypothetical protein TERM 486 588992 - 589008 + F 75 -8.7 -3.34013 | overlap 588968 CAATTTCTTGTAGCG CCGGTTT TCA AGACCGG TTCCTTAAACCACTC ftsA 589210 - 590457 + | cell division protein FtsA OTT_0578 590436 - 591746 + | hypothetical protein TERM 487 592077 - 592095 + G 73 -9 -2.94199 | opp_overlap 592077 592074 TAGTTAAATTAATTA GCAAAAAA GAT TTTTTTGC TCTGATTGATAACTC TERM 488 592095 - 592077 - g 73 -9 -2.90283 | opp_overlap 592077, overlap 592074 TAGTTAAATTAATTA GCAAAAAA GAT TTTTTTGC TCTGATTGATAACTC OTT_0579 591731 - 593482 + | hypothetical protein OTT_0580 593930 - 594367 + | transposase OTT_0581 594843 - 594667 - | putative conjugative transfer protein TraD tme 596806 - 595505 - | malate oxidoreductase and phosphate acetyltransferase OTT_0583 597752 - 596826 - | hypothetical protein TERM 489 597844 - 597834 - H 75 -5.4 -4.87318 | opp_overlap 597834 TGTAAAACCTAAAAA CTAG TTG CTAG TTAAATTTAGCTTTG TERM 490 598166 - 598144 - g 71 -7.9 -3.54382 | overlap 598140 GGTTAATATAACTAA TAGCTTTAA GGATA TTAAAGCTA CAGGGTTTATTAAGG OTT_0584 598061 - 598660 + | hypothetical protein gltA 598789 - 599100 + | citrate synthase OTT_0586 599852 - 599097 - | transposase OTT_0587 600172 - 599966 - | transposase atpC 600614 - 600210 - | ATP synthase epsilon chain atpD 602047 - 600611 - | ATP synthase beta chain TERM 491 600677 - 600666 - G 74 -5.8 -4.7078 | CCAACCATGTAAAAA GCCA TTTC TGGC AAATCATCATATTTT capM 603532 - 602393 - | CapM protein TERM 492 604024 - 604008 - g 90 -5.1 -5.86609 | overlap 604010 TGAAAAAAATAAAAA CAGTATG ATT CATACAG GATATATTGAATTGG TERM 493 604022 - 604010 - g 74 -6.3 -4.51984 | overlap 604008 AAAAAAATAAAAACA GTATG ATT CATAC AGGATATATTGAATT OTT_0591 603568 - 604335 + | hypothetical protein TERM 494 604611 - 604597 - T 70 -2.9 -5.18995 | opp_overlap 604597 AACATAATAGAAAAA CATTT GCCAA AAATG GTTTATCTTAAACTT slt 606729 - 604732 - | soluble lytic murein transglycosylase precursor TERM 495 607086 - 607067 - g 72 -8.6 -3.01712 | gap 1, opp_overlap 607066, overlap 607069 TTCTTTGGGTGAATA CAGC-GCAC TGT GTGCAGCTG GTGCTTTATCATTAG TERM 496 607663 - 607690 + G 90 -9.4 -4.22375 | gap 1, opp_overlap 607670 CTTTTAAATGTAGTA GCATCAA-TTCAA TAT TTGAAATTGATGC TTTCTTAAATAATAT fabD 606771 - 607709 + | malonyl CoA-acyl carrier protein transacylase OTT_0594 609424 - 608870 - | transposase TERM 497 609380 - 609394 + g 71 -2.9 -5.23765 | CTTAGGTATAGCACT TATCA CTTGT TGATA TTTTTCTCTTATTTC OTT_0595 609756 - 609448 - | transposase TERM 498 612304 - 612316 + H 72 -4.9 -4.98522 | opp_overlap 612304 612299 CGTTGACAATCAAAA TTAGT TAT ACTAA TTTTTGTATCAAATT TERM 499 613163 - 613192 + G 74 -6.6 -4.23723 | opp_overlap 613165, overlap 613165 ATAAATGGTTGGAAG TATTAGGATGTG GTATAG TACATCCTAATG TTTTACGTAATGTTA pheS 612352 - 613386 + | phenylalanyl-tRNA synthetase alpha chain pheT 613383 - 615824 + | phenylalanyl-tRNA synthetase beta chain TERM 500 615877 - 615907 + T 100 -12.8 -3.96068 | opp_overlap 615882 615886, overlap 615879 AGCTTTAACTCTTGC AAGGACTAAGAAAT AAA ATTTCTTAGTCCTA TTATTATTCAACTAC TERM 501 615879 - 615905 + T 100 -15.4 -3.5672 | opp_overlap 615882 615886, overlap 615877 CTTTAACTCTTGCAA GGACTAAGAAAT AAA ATTTCTTAGTCC TATTATTATTCAACT TERM 502 615902 - 615882 - T 78 -9.9 -2.71681 | opp_overlap 615879 615877, overlap 615886 TAACTCTTGCAAGGA CTAAGAAAT AAA ATTTCTTAG TCCTATTATTATTCA tsf 616840 - 615911 - | translation elongation factor Ts rpsB 617715 - 616837 - | 30S ribosomal protein S2 OTT_0600 618893 - 618042 - | hypothetical protein TERM 503 618499 - 618475 - G 80 -5.2 -5.1615 | gap 1, opp_overlap 618475 TCAATATCCAAAAAA CTATCATTCAC AGGA GT-AATGATAG TATCTGCATATGAAT pepA 620529 - 618877 - | aminopeptidase A TERM 504 620548 - 620566 + r 75 -7.6 -3.9344 | opp_overlap 620548 620551, overlap 620551 GACTCACTAAATTTA GAATAATA ACT TATTATTC TTTGATATTAAAGTT OTT_0602 622814 - 621330 - | ankyrin repeat-containing protein 12_01 TERM 505 623426 - 623442 + r 70 -2.3 -5.38951 | overlap 623423 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTATATACCTT OTT_0603 623878 - 623609 - | transposase TERM 506 624829 - 624813 - g 73 -8.1 -3.54574 | overlap 624822 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 507 624975 - 625000 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 624975 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_0604 624369 - 625337 + | transposase TERM 508 625381 - 625331 - f 100 -13.3 -2.84098 | opp_overlap 625331 625335, overlap 625335 625338 625341 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 509 625331 - 625381 + F 100 -13.3 -4.84262 | opp_overlap 625331 625335 625338 625341, overlap 625335 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 510 625335 - 625377 + F 91 -8.3 -4.91657 | opp_overlap 625335 625331 625338 625341, overlap 625331 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 511 625377 - 625335 - f 80 -8.3 -4.10331 | opp_overlap 625331 625335, overlap 625331 625338 625341 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_0605 625825 - 627336 + | hypothetical protein leuS 627669 - 627932 + | leucyl-tRNA synthetase OTT_0607 628176 - 628889 + | repeat-containing protein A_03 OTT_0608 629420 - 628914 - | transposase OTT_0609 629781 - 629407 - | transposase OTT_0610 629972 - 629838 - | transposase OTT_0611 630333 - 629959 - | transposase OTT_0612 630546 - 630719 + | transposase TERM 512 630837 - 630821 - gT 71 -2.3 -5.38951 | overlap 630828 AAGGCATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0613 630673 - 631047 + | transposase rbfA 631432 - 631070 - | ribosome-binding factor A TERM 513 631310 - 631358 + g 71 -9.2 -2.53382 | gap 1 CACTTTTGTGACAGT TATCTTGCACTCAAATAAATCTG TATG CAG-TTTATTTGAGTGCAGAACA TCAATTAAAGCTAGT infB 634003 - 631463 - | translation initiation factor IF-2 nusA 635755 - 634253 - | N utilization substance protein A OTT_0617 636256 - 635774 - | hypothetical protein ubiE 636794 - 637567 + | ubiquinone/menaquinone biosynthesis methlytransferase UbiE TERM 514 638371 - 638355 - g 91 -9.5 -4.51994 | GCAACTAATAATAAA TCAAGGA ACA TCCTTGA AAGATCTATCAGAAA ubiB 637564 - 638952 + | ubiquinone biosynthesis protein UbiB OTT_0620 639034 - 639528 + | transposase TERM 515 639646 - 639630 - gf 71 -2.3 -5.38951 | overlap 639637 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0621 639482 - 639856 + | transposase TERM 516 641923 - 641893 - g 77 -8.4 -3.86194 | AACGCTGTTGAGAAA GCTCTTGATCATCT ATT AAAAAATCAAGAGC AGACAGCAGCCTGTA TERM 517 644178 - 644126 - g 100 -12.9 -3.745 | opp_overlap 644136, overlap 644124 644128 644129 644131 TTATTGATGAAAAGA TATTACGGCAGCTTGACATTGTTAC AAA GCAACAATGTCAAGCTGCATTAGAA AAAGGTATAATACAT TERM 518 644176 - 644128 - g 100 -15.5 -3.45073 | opp_overlap 644136, overlap 644126 644124 644129 644131 ATTGATGAAAAGATA TTACGGCAGCTTGACATTGTTAC AAA GCAACAATGTCAAGCTGCATTAG AAAAAGGTATAATAC TERM 519 644175 - 644129 - g 100 -19 -2.66321 | opp_overlap 644136, overlap 644128 644126 644124 644131 TTGATGAAAAGATAT TACGGCAGCTTGACATTGTTAC AAA GCAACAATGTCAAGCTGCATTA GAAAAAGGTATAATA TERM 520 644173 - 644131 - g 100 -17.2 -2.86656 | opp_overlap 644136, overlap 644129 644128 644126 644124 GATGAAAAGATATTA CGGCAGCTTGACATTGTTAC AAA GCAACAATGTCAAGCTGCAT TAGAAAAAGGTATAA TERM 521 644136 - 644168 + G 100 -16.5 -2.52464 | opp_overlap 644131 644129 644128 644126 644124 AAAGATATTACGGCA GCTTGACATTGTTAC AAA GCAACAATGTCAAGC TGCATTAGAAAAAGG OTT_0622 641860 - 644685 + | hypothetical protein OTT_0623 646014 - 645409 - | transposase ccmF 650138 - 648276 - | cytochrome c-type biogenesis protein CcmF TERM 522 649078 - 649061 - G 72 -3.5 -5.26918 | ATATTGGATAAAAAA TAGCAAT GAAA ATTACTA TAAGTGCTGATAACC OTT_0625 651396 - 650128 - | hemolysin homolog TERM 523 651806 - 651832 + H 74 -8.9 -2.91997 | gap 1, opp_overlap 651810, overlap 651803 CTTAAAGAGGCTTGA GTAATGTGATGC TAAA GCATCACA-TAC TAGTTGTATATCCAG TERM 524 651829 - 651810 - H 90 -10.8 -3.15427 | opp_overlap 651806 651803 AAGAGGCTTGAGTAA TGTGATGC TAAA GCATCACA TACTAGTTGTATATC OTT_0626 652588 - 652827 + | hypothetical protein sodB 652927 - 653568 + | superoxide dismutase TERM 525 654387 - 654359 - g 100 -14.8 -2.74488 | opp_overlap 654351 654365, overlap 654363 CAAGGAGCTGAAGCA TCAATAGCTGCA GTTAT TGCAGCTATTGA ACAAGCTATTGATTA TERM 526 654383 - 654363 - g 78 -9.8 -3.27774 | opp_overlap 654351 654365, overlap 654359 GAGCTGAAGCATCAA TAGCTGCA GTTAT TGCAGCTA TTGAACAAGCTATTG TERM 527 654365 - 654381 + G 72 -8.7 -3.02263 | opp_overlap 654363 654359, overlap 654351 GCTGAAGCATCAATA GCTGCAG TTA TTGCAGC TATTGAACAAGCTAT sucA 653609 - 656500 + | 2-oxoglutarate dehydrogenase e1 component TERM 528 657243 - 657267 + G 74 -2.9 -5.4505 | opp_overlap 657243 ATTTGAAAAAAAGCA TGAAATTAAAC TTG GTTTTATGTCA TTTTTTGTTAAAGCG TERM 529 657367 - 657343 - g 72 -8.7 -3.00774 | GATGGTAATGACATA CTATATCACAA TTA CTGCGATATAG GAGTAGCAGTAAGTA TERM 530 657627 - 657611 - g 78 -6.6 -4.4715 | opp_overlap 657610 TGGGAATGCATAAAA TACAGG ACAGG CCTGTA GTAATTAATGGCACT sucB 656500 - 657777 + | dihydrolipoamide acetyltransferase component TERM 531 657807 - 657796 - g 71 -3 -5.3104 | opp_overlap 657796 TTATGAAAAAGAAAA TAAC TGTT GTTA TTATAGTATTAGTAG OTT_0630 657783 - 659261 + | hypothetical protein TERM 532 660473 - 660487 + G 85 -2.8 -6.19302 | opp_overlap 660451 660474, overlap 660469 660474 TTGCTGCTACAGTAA TTGCAG CAG TTGCAG TTTTTTTTCTTATGT proP5 659554 - 660855 + | proline/betaine transporter TERM 533 660860 - 660875 + F 75 -5.4 -4.84311 | opp_overlap 660860, overlap 660861 ATAAGCATTAAAATT TGCACT TAGC AGTGCG TTTTCTTATATACAA OTT_0632 660922 - 661260 + | hypothetical protein coxC 662473 - 661649 - | cytochrome c oxidase subunit III ruvB 663632 - 662655 - | holliday junction DNA helicase RuvB TERM 534 662883 - 662908 + g 82 -7.8 -4.41302 | opp_overlap 662875 662880 TAATTTATCAATTCC TAACTGATTA AGAGCA TAATCAGTTA TTTGTTGATTTAATG ruvA 664249 - 663632 - | holliday junction DNA helicase RuvA OTT_0636 666634 - 664493 - | hypothetical protein bcr2 668207 - 667002 - | drug resistance transporter, Bcr/CflA family protein TERM 535 667592 - 667611 + g 75 -8 -3.65224 | TATTAACAAGCGCAT TCTTAAAG CCGA CTTTAAGA TTATTAAAATCAAAT TERM 536 668289 - 668299 + r 76 -4 -5.55769 | TAAGTATTAATAGAT TAGT TAT ACTA TTTTTTATTCTGAAG TERM 537 668721 - 668708 - R 71 -3.9 -5.00884 | ATTGCTTTTAAAAAA TTACT TCAA AGTAA TACAGATAAAACTAG TERM 538 668991 - 669041 + r 100 -13.3 -2.84098 | opp_overlap 668991 668995, overlap 668995 668998 669001 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 539 669041 - 668991 - R 100 -13.3 -4.84262 | opp_overlap 668991 668995 668998 669001, overlap 668995 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 540 668995 - 669037 + r 80 -8.3 -4.10331 | opp_overlap 668991 668995, overlap 668991 668998 669001 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 541 669037 - 668995 - R 91 -8.3 -4.91657 | opp_overlap 668995 668991 668998 669001, overlap 668991 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0638 669997 - 669035 - | transposase TERM 542 669397 - 669372 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 669372 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 543 669543 - 669559 + g 73 -8.1 -3.54574 | overlap 669540 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG TERM 544 670807 - 670768 - H 100 -12.6 -3.81339 | opp_overlap 670770 670772 TATTGACAATGCAAA TATATTATATCACTAATT AATT AATAAGTGATATAATATA TTAAAAAAAGATTTA TERM 545 670770 - 670805 + H 88 -10.8 -3.02043 | opp_overlap 670768, overlap 670772 TTGACAATGCAAATA TATTATATCACTAATT AATT AATAAGTGATATAATA TATTAAAAAAAGATT TERM 546 670772 - 670803 + H 76 -9 -3.06696 | opp_overlap 670768, overlap 670770 GACAATGCAAATATA TTATATCACTAATT AATT AATAAGTGATATAA TATATTAAAAAAAGA OTT_0639 670926 - 674363 + | sensor histidine kinase/response regulator/transporter hybrid protein TERM 547 674630 - 674615 - f 72 -4.8 -4.95167 | opp_overlap 674615 TAAGGAAGAAGAAAA GTTAAT TTTT ATTAAC TTCTACACTTTATAG TERM 548 674904 - 674893 - f 70 -3 -5.33785 | AATTAGTATAAAAAA TTTG ATAT CAAA AAAAGCATAATTTAT TERM 549 675626 - 675614 - g 74 -6.3 -4.45115 | overlap 675611 675616 ATTAATAGAAAACAA TCCTA CTC TAGGA ATAGAGCAGCATAAA OTT_0640 674985 - 676007 + | putative integrase OTT_0641 676848 - 676408 - | hypothetical protein OTT_0642 676832 - 677971 + | reverse transcriptase OTT_0643 678464 - 678613 + | hypothetical protein OTT_0644 678613 - 678930 + | putative conjugative transfer protein TraE OTT_0645 678960 - 679142 + | putative conjugative transfer protein TraB OTT_0646 679142 - 679471 + | hypothetical protein OTT_0647 679380 - 680177 + | putative conjugative transfer protein TraC OTT_0648 680269 - 680430 + | putative conjugative transfer protein TraC OTT_0649 680535 - 681497 + | putative conjugative transfer protein TraC TERM 550 682787 - 682737 - g 100 -13.3 -4.84262 | opp_overlap 682737 682741 682744 682747, overlap 682741 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 551 682737 - 682787 + G 100 -13.3 -2.84098 | opp_overlap 682737 682741, overlap 682741 682744 682747 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA OTT_0650 681563 - 682765 + | putative conjugative transfer protein TraN TERM 552 682783 - 682741 - T 91 -8.3 -4.91657 | opp_overlap 682737 682741 682744 682747, overlap 682737 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 553 682741 - 682783 + T 80 -8.3 -4.10331 | opp_overlap 682741 682737, overlap 682737 682744 682747 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0651 683743 - 682781 - | transposase TERM 554 683143 - 683118 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 683118 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 555 683289 - 683305 + g 73 -8.1 -3.54574 | overlap 683286 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0652 684080 - 684274 + | putative conjugative transfer protein TraN OTT_0653 684528 - 685319 + | TPR repeat-containing protein 05 OTT_0654 685429 - 686022 + | hypothetical protein TERM 556 686653 - 686637 - g 73 -8.1 -3.54574 | overlap 686646 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 557 686799 - 686824 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 686799 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_0655 686199 - 687161 + | transposase TERM 558 687205 - 687155 - T 100 -13.3 -2.84098 | opp_overlap 687155 687159, overlap 687159 687162 687165 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 559 687155 - 687205 + T 100 -13.3 -4.84262 | opp_overlap 687155 687159 687162 687165, overlap 687159 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 560 687201 - 687159 - T 80 -8.3 -4.10331 | opp_overlap 687155 687159, overlap 687155 687162 687165 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 561 687159 - 687201 + T 91 -8.3 -4.91657 | opp_overlap 687159 687155 687162 687165, overlap 687155 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_0656 687737 - 687177 - | putative transposase TERM 562 687386 - 687412 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTGTAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT OTT_0657 688907 - 687789 - | putative conjugative transfer protein TraI TERM 563 689114 - 689135 + rH 73 -5.2 -4.63172 | TTACAAACATCACTG TGAGCTGT TTATGT ATAGCTCA TTTTGTAATTTGCTC TERM 564 689202 - 689216 + rH 70 -8.6 -2.55583 | overlap 689199 689198 AGCACTACCGTCTAA CTCCAA TTT TTGGAG CTATGTTAGTTTTCA OTT_0658 689598 - 689191 - | putative conjugative transfer protein TraA OTT_0659 689592 - 689966 + | transposase OTT_0660 689953 - 690459 + | transposase OTT_0661 690955 - 690473 - | putative conjugative transfer protein TraA OTT_0662 692964 - 690970 - | putative conjugative transfer protein TraA TERM 565 693332 - 693304 - g 87 -5.3 -5.52384 | TCTTCAGCAAAAAAA GGCTAAGCTAATC ATG GATGAGGTTAACC TTAAAATTAAAGAAC OTT_0663 693260 - 693715 + | putative conjugative transfer protein TraD TERM 566 694082 - 694065 - g 86 -5.7 -5.46629 | AATATGCTAAAAAAA CATATAA TATA TTATATG CAGTAGAAGAGCTTA OTT_0664 693809 - 694345 + | hypothetical protein OTT_0665 694947 - 694372 - | RelA/SpoT-related protein TERM 567 694435 - 694463 + g 77 -7.5 -4.04752 | opp_overlap 694435 TGGTAGATTAAGGTA CTTAGCAAGAGGT ATA AATTCTTGCTGAG TTTCTAGTATGATTT OTT_0666 695905 - 695048 - | hypothetical protein TERM 568 695205 - 695215 + g 71 -5.4 -4.68724 | opp_overlap 695203 695205 ACCAACTCAAAATCA GCTA ATT TAGC TTTTATATTCCCTAA OTT_0667 696655 - 695927 - | hypothetical protein OTT_0668 697029 - 697841 + | N6 adenine-specific DNA-methyltransferase OTT_0669 698126 - 697845 - | hypothetical protein OTT_0670 698682 - 698383 - | hypothetical protein OTT_0671 698666 - 699649 + | reverse transcriptase lipB 701179 - 700553 - | probable lipoate-protein ligase B TERM 569 701066 - 701052 - G 70 -7.2 -3.58864 | CCAGCAGTATAAACA TCTTGA TGC TCAAGA ATAAATACAGCTTCT TERM 570 701090 - 701072 - G 72 -6 -4.45068 | ATGCTCAAGAATAAA TACAGCTT CTG AAGCAGTA CCGTTTAGTATTCCT murD 701262 - 702680 + | UDP-N-acetylmuramoylalanine-D-glutamate ligase ftsW 702687 - 703814 + | cell division protein FtsW TERM 571 703992 - 703976 - g 70 -8.1 -3.07487 | opp_overlap 703975, overlap 703975 703984 TTATAGTTTTAAAAT CCATATT ATG AATATGG TATCCATTTCTAATA TERM 572 704137 - 704166 + G 71 -8.1 -3.35679 | opp_overlap 704141, overlap 704141 TTGCTCCTATTATTA TAAATGGAATATT ATTT AAAATTCCATTTA TTCTACATGAGCAAA TERM 573 704194 - 704208 + G 74 -5.7 -4.66987 | AAAACAGTGTTTTAG GCCTA GCTAA TAGGC TTTTCTTAAGATATG murG 703818 - 704897 + | UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 574 704929 - 704883 - f 84 -9.1 -4.03978 | gap 1 AATGCGGTAGAGAAA TTTATAGTAACTTAGGCCAAAT TTAG ATATGG-CTAAGCCACTATAAA ACAGTTATATTATAT TERM 575 705598 - 705586 - g 70 -6.3 -4.23615 | opp_overlap 705585 AGCAGATGGAATAAA GCAAA AGC TTTGC AATGTTTGCTTACAC OTT_0676 705376 - 705660 + | reverse transcriptase OTT_0677 707056 - 706682 - | transposase TERM 576 706892 - 706908 + g 71 -2.3 -5.38951 | overlap 706889 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTT_0678 707244 - 707068 - | transposase lysC 708992 - 707778 - | aspartokinase OTT_0680 709769 - 709272 - | hypothetical protein kefB 711492 - 709750 - | glutathione-regulated potassium-efflux system protein KefB TERM 577 709956 - 709968 + g 70 -6.3 -4.21936 | ATTCATTAGAGCGCT GCAAA TCT TTTGC TTTTACAATTATAGC TERM 578 710758 - 710746 - G 82 -7.7 -4.45117 | TATACCTGAAACAAA TGCAC CTA GTGCA AGTGATAAACCTTGA TERM 579 711404 - 711414 + g 70 -4 -5.02476 | opp_overlap 711404 TATCCAAGTACAGGA CTAA GCT TTAG TTTTTTAAAAACTAT TERM 580 711755 - 711744 - g 73 -4.4 -5.05712 | overlap 711745 ATAAACAATTAAAAA GTTG TTAT CAAC AAAGCCATCAAATAT OTT_0682 711665 - 712237 + | 5-formyltetrahydrofolate cyclo-ligase TERM 581 712312 - 712327 + G 82 -2.6 -5.97575 | AAAGGTGGGTTAAAA TTGATT ATTG GATCAA TTTTTTTTGTGAGTT OTT_0683 712234 - 712848 + | hypothetical protein OTT_0684 712998 - 712813 - | hypothetical protein OTT_0685 713523 - 713134 - | putative conjugative transfer protein TraC OTT_0686 713729 - 713589 - | putative conjugative transfer protein TraC OTT_0687 713950 - 714363 + | transposase TERM 582 714563 - 714547 - f 70 -2.3 -5.38951 | overlap 714554 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0688 714645 - 714773 + | transposase TERM 583 716596 - 716585 - g 81 -3 -5.77571 | ATGAAAAAATAAAAA CTTT CAAA AAAG AATTAGCAAGCAAGG TERM 584 717102 - 717085 - g 77 -9.9 -2.77994 | opp_overlap 717095, overlap 717097 TATAAATTTGAATTA GCTGACA AAAG TGTCAGC TGGGCTGCGCTTTCT OTT_0689 714880 - 717465 + | hypothetical protein OTT_0690 717506 - 720010 + | hypothetical protein OTT_0691 720442 - 719990 - | transposase TERM 585 720241 - 720225 - G 79 -8.1 -4.09321 | opp_overlap 720224 720225 GACTCAATTAAAGAA CGTTTAT TTA ATAAACG CTTATCATCTATGTC OTT_0692 720717 - 720442 - | transposase TERM 586 721322 - 721304 - H 75 -7.5 -3.89822 | overlap 721312 TATCGATTCTACAAA GTTAGGA ATTTG TCCTAAC AAACGTATTTCCAGC TERM 587 721480 - 721525 + H 90 -11 -3.40522 | gap 1, opp_overlap 721473 721494 721518, overlap 721481 721483 ATACCTAAGCCATCG TG-ATAGCTATACTATTATAA CTGTT TTATAATAGTATAGCTATGTA TTGTACTAGCGAACT TERM 588 721481 - 721523 + H 100 -13.9 -3.27475 | opp_overlap 721473 721494 721518, overlap 721480 721483 TACCTAAGCCATCGT GATAGCTATACTATTATAA CTGTT TTATAATAGTATAGCTATG TATTGTACTAGCGAA TERM 589 721483 - 721521 + H 100 -16.5 -3.20322 | opp_overlap 721473 721494 721518, overlap 721481 721480 CCTAAGCCATCGTGA TAGCTATACTATTATAA CTGTT TTATAATAGTATAGCTA TGTATTGTACTAGCG TERM 590 722240 - 722261 + G 73 -4.5 -4.99972 | opp_overlap 722240 ATTGGGAAGAATAAC TGGAATAAT AATC ATTATACCA TTTTTAATCTTTTAT coxW 721944 - 723023 + | cytochrome c oxidase assembly protein TERM 591 723163 - 723148 - f 78 -2.6 -5.87996 | TAAGGAAGAAAAAAA GCTAAT TTTT ATTAAC TTCTGCACTTTATAG TERM 592 723436 - 723425 - f 70 -3 -5.33785 | AATTAGTATAAAAAA TTTG CTAT CAAA AAAAGCATAATATAG OTT_0694 724090 - 724326 + | putative conjugative transfer protein TraB OTT_0695 724586 - 724732 + | putative conjugative transfer protein TraB OTT_0696 725338 - 726207 + | hypothetical protein OTT_0697 727192 - 726887 - | putative conjugative transfer protein TraC OTT_0698 728088 - 727402 - | putative conjugative transfer protein TraG TERM 593 728023 - 728012 - G 72 -5.8 -4.41422 | TTAGATACAAAATAA CTCG TTTG CGAG GAAAGAGAAGCAAAC OTT_0699 729112 - 728135 - | putative conjugative transfer protein TraU OTT_0700 729316 - 729113 - | hypothetical protein OTT_0701 730061 - 729402 - | putative conjugative transfer protein TraW TERM 594 729457 - 729467 + g 71 -6.8 -3.97108 | TCTTGCTCTATTATG GCTG GCA CAGC TTGTATTTTAAACTT OTT_0702 730336 - 730058 - | putative conjugative transfer protein TraC OTT_0703 732616 - 730535 - | putative conjugative transfer protein TraC TERM 595 730650 - 730636 - GR 81 -10 -3.14013 | opp_overlap 730627, overlap 730625 730634 CAATCACAGCTAACA GCTCTG GTA CAGAGC GTAGATGATCTGTTT OTT_0704 732857 - 732528 - | hypothetical protein OTT_0705 733126 - 732857 - | putative conjugative transfer protein TraB OTT_0706 733316 - 733089 - | putative conjugative transfer protein TraB OTT_0707 733532 - 733428 - | hypothetical protein OTT_0708 733834 - 733532 - | hypothetical protein OTT_0709 734154 - 733831 - | putative conjugative transfer protein TraE OTT_0710 734384 - 734241 - | putative conjugative transfer protein TraE OTT_0711 734533 - 734384 - | hypothetical protein OTT_0712 735545 - 735204 - | putative integrase OTT_0713 736099 - 735755 - | putative integrase OTT_0714 736875 - 736516 - | transposase OTT_0715 737614 - 737372 - | transposase TERM 596 737450 - 737466 + g 71 -2.3 -5.38951 | overlap 737447 TTTCTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTT_0716 737982 - 737626 - | transposase OTT_0717 738292 - 739098 + | bacteriophage-type DNA polymerase TERM 597 739364 - 739374 + F 73 -5.4 -4.79955 | GCAGGCTTTACTTTT TAGC TAA GCTA TTTTATTCTCAATCT TERM 598 739901 - 739933 + F 73 -8 -3.49951 | opp_overlap 739906, overlap 739906 AGTTTATAGTGATAG CTAAACTATTACAA CTGTT TTATAATAGTTTAG TTATATGAGACTGTA TERM 599 740022 - 740058 + F 84 -5.6 -5.34555 | opp_overlap 740022 GTTTTAAAGAAAAAA TAATTTTATAAAAA AAATGCAGG TTTTTATAAAATTA TTTTTTCTGATATGC TERM 600 740058 - 740022 - f 90 -5.6 -5.63517 | opp_overlap 740022 GTTTTAAAGAAAAAA TAATTTTATAAAAA AAATGCAGG TTTTTATAAAATTA TTTTTTCTGATATGC TERM 601 740426 - 740409 - g 75 -4.9 -5.00895 | overlap 740410 TTCATCATATAAAAA CTTTGCT TCTT AGCAAAA GACATATTATAGAAA OTT_0718 740330 - 740584 + | transposase TERM 602 741393 - 741416 + G 85 -11 -3.35996 | opp_overlap 741393 741404 TTATTGGAGTTGAAA CAGCTACAGC ACCA GCTGAAGCTG TTATAAATCCAACTA TERM 603 741416 - 741393 - g 89 -11 -3.60627 | opp_overlap 741393, overlap 741404 TTATTGGAGTTGAAA CAGCTACAGC ACCA GCTGAAGCTG TTATAAATCCAACTA OTT_0719 740780 - 742063 + | amino acid transporter OTT_0720 745827 - 742447 - | repeat-containing protein C TERM 604 745726 - 745745 + g 87 -10.8 -3.50325 | overlap 745724 AATATACTTCTTAAC TGCTGGAA GTTT TTCCAGCA TATCTTTTACTTCTG TERM 605 745969 - 746012 + H 100 -17.1 -2.53581 | opp_overlap 745964 AAAGAGCAGACTTAT CTCACACTTTGTGAAATGA AAAATA TCATTTCACAAAGTGTGAC TACCTTAACAATGTA OTT_0721 746260 - 746517 + | transposase TERM 606 747146 - 747156 + T 74 -4 -5.20328 | opp_overlap 747146 TGTTTTTAAGCATAA CAAA ATT TTTG TTTCTTTTTTTCAAG petB 748449 - 747253 - | cytochrome b petA 749264 - 748599 - | cytochrome b6-f complex iron-sulfur subunit OTT_0724 750515 - 749376 - | hypothetical protein ccmB 751319 - 750669 - | heme exporter protein B ccmA 751921 - 751316 - | heme exporter protein A acnA 752263 - 752604 + | aconitate hydratase acnA 752752 - 753150 + | aconitate hydratase OTT_0729 754480 - 754166 - | transposase OTT_0730 754922 - 754497 - | transposase TERM 607 754665 - 754652 - G 71 -5.3 -4.58685 | AAATTTTGTTAAAAA CTCTA TTGC TAGAG GTACGTTTATTATGA TERM 608 755237 - 755225 - H 79 -3.5 -5.66338 | AAACATAACAAAAAA TATTA GCA TAATA TAAAATTTTAACTTA ssb 755294 - 755761 + | single-strand binding protein TERM 609 755889 - 755914 + G 78 -9.3 -3.39005 | opp_overlap 755896, overlap 755892 755896 ATCTAGAGTTAGTGT TAATAAACTTA CTTA TAAGTTTATTA TTATCGAGTTATATC OTT_0732 755840 - 756700 + | hypothetical protein OTT_0733 757721 - 757509 - | putative conjugative transfer protein TraE lepA 760095 - 758290 - | GTP-binding protein LepA prfB 760487 - 761350 + | peptide chain release factor RF-2 OTT_0736 763201 - 761672 - | hypothetical protein TERM 610 762680 - 762714 + g 83 -10.3 -3.36327 | opp_overlap 762669 762680 AAAATGTTGCCAAAA TTTTATCAGAACC CTTAGAACT GGTTCTGATAAAA TTCTACCTGCAATCA TERM 611 762714 - 762680 - G 91 -10.3 -4.10855 | opp_overlap 762680, overlap 762669 AAAATGTTGCCAAAA TTTTATCAGAACC CTTAGAACT GGTTCTGATAAAA TTCTACCTGCAATCA TERM 612 763273 - 763283 + r 82 -2.6 -6.00086 | opp_overlap 763273 CATCTTCAAGGAAAG TTAT AAC ATAA TTTTTTTTATCATCT OTT_0737 764127 - 763444 - | hypothetical protein OTT_0738 764458 - 764622 + | hypothetical protein TERM 613 764682 - 764726 + T 74 -8.2 -3.60627 | opp_overlap 764685 764693, overlap 764685 764693 ATATCTAGGTCATAG TAATAGCCAAACTATTATAA CTGTT TTATAGTAGTTTAGCTATAA TTTCCGATAAGCTCA TERM 614 764685 - 764723 + T 80 -9.9 -2.92613 | opp_overlap 764685 764693, overlap 764682 764693 TCTAGGTCATAGTAA TAGCCAAACTATTATAA CTGTT TTATAGTAGTTTAGCTA TAATTTCCGATAAGC TERM 615 764723 - 764685 - T 83 -9.9 -3.27022 | opp_overlap 764685 764682 764693, overlap 764693 TCTAGGTCATAGTAA TAGCCAAACTATTATAA CTGTT TTATAGTAGTTTAGCTA TAATTTCCGATAAGC hemB 765856 - 764843 - | delta-aminolevulinic acid dehydratase TERM 616 766596 - 766611 + G 74 -6.2 -4.42619 | overlap 766590 CGGATTATTTGCAGC TATTCC AGCT GGAATA TTTTATAACATATTA tolQ 766027 - 766716 + | TolQ protein TERM 617 766783 - 766769 - g 71 -5.6 -4.58395 | opp_overlap 766770 766771, overlap 766770 766771 TGTATTCGCTAAAAA GCGCTC TAA GAGAGC ATTAATTAGCAATAT tolR 766722 - 767180 + | TolR protein TERM 618 768310 - 768324 + G 70 -7.1 -3.57561 | opp_overlap 768309 GTTAAACGAGCAATT TGGGC AGCAA GCCCA TTTCAAGAGTTACCA OTT_0742 767167 - 768396 + | hypothetical protein ppnK 769286 - 768495 - | inorganic polyphosphate/ATP-NAD kinase TERM 619 768997 - 769009 + g 74 -6.3 -4.46675 | TTAATTGCAACTACT TTAGC AGA GCTAA TTTGTTCTATTAAAT gcp 770333 - 769299 - | sialoglycoprotease TERM 620 769726 - 769752 + g 73 -8.2 -3.52906 | overlap 769725 AGATCACAGCCAGAT TTCTTTGTCATT GAC AATGGTAAAGAA TATTTGTGAGGATCA OTT_0745 770866 - 770357 - | hypothetical protein dnaQ 771754 - 771086 - | DNA polymerase III epsilon chain TERM 621 773786 - 773796 + G 74 -4 -5.14563 | opp_overlap 773782 TCTCAACTACATTTA TTTG GAA CAAA TTTTTTAATGCAGCA OTT_0747 772501 - 775938 + | sensor histidine kinase/response regulator/transporter hybrid protein TERM 622 776205 - 776190 - f 72 -4.8 -4.95167 | opp_overlap 776190 TAAGGAAGAAGAAAA GTTAAT TTTT ATTAAC TTCTACACTTTATAG TERM 623 777198 - 777186 - g 74 -6.3 -4.45115 | overlap 777183 777188 ATTAATAGAAAACAA TCCTA CTC TAGGA ATAGAGCAGCATAAA OTT_0748 776683 - 777801 + | putative integrase OTT_0749 777939 - 778262 + | hypothetical protein OTT_0750 778262 - 778579 + | putative conjugative transfer protein TraE OTT_0751 778791 - 778973 + | hypothetical protein OTT_0752 779221 - 780261 + | putative conjugative transfer protein TraC OTT_0753 781279 - 780290 - | ankyrin repeat-containing protein 01_02 OTT_0754 781617 - 782243 + | putative conjugative transfer protein TraU OTT_0755 782318 - 782650 + | putative conjugative transfer protein TrbC TERM 624 783341 - 783323 - f 71 -4.6 -4.82901 | overlap 783325 TCCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 625 783439 - 783404 - f 100 -19.4 -3.01791 | opp_overlap 783409 783413, overlap 783409 783413 ATTTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAATTTCTTTCA GGGACATATATAGAT TERM 626 783434 - 783409 - f 100 -13.5 -3.92324 | opp_overlap 783409 783413, overlap 783404 783413 CGTCCCAACATGAAA GAAATTTCAGG TCAA CCTGAAATTTC TTTCAGGGACATATA TERM 627 783409 - 783434 + F 100 -13.5 -3.54129 | opp_overlap 783404 783409 783413, overlap 783413 CGTCCCAACATGAAA GAAATTTCAGG TCAA CCTGAAATTTC TTTCAGGGACATATA TERM 628 783430 - 783413 - f 83 -8.5 -4.56883 | opp_overlap 783413 783409, overlap 783409 783404 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA TTTCTTTCAGGGACA TERM 629 783413 - 783430 + F 83 -8.5 -4.41348 | opp_overlap 783409 783404 783413, overlap 783409 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA TTTCTTTCAGGGACA TERM 630 783480 - 783466 - f 84 -3.6 -5.77988 | AGATATATAAAAAAA TCTAAA ATA TCTAGA TCTACTGAAGGTGAA TERM 631 783561 - 783535 - f 77 -5.4 -5.10765 | opp_overlap 783535 783538, overlap 783530 AAATAAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACAGACTTC OTT_0756 783758 - 784498 + | hypothetical protein OTT_0757 784507 - 784986 + | replicative DNA helicase OTT_0758 785152 - 785943 + | replicative DNA helicase OTT_0759 786181 - 786756 + | RelA/SpoT-related protein OTT_0760 787596 - 787775 + | hypothetical protein OTT_0761 788295 - 787789 - | transposase OTT_0762 788625 - 788437 - | transposase TERM 632 788477 - 788496 + g 80 -7.2 -4.6038 | gap 1, opp_overlap 788477 ATTTTTGCATTATAA CCTT-TGGC TGA GCCATAAGG TTTTGCTTTAATATC OTT_0763 788811 - 790436 + | repeat-containing protein D TERM 633 790794 - 790776 - T 74 -8.2 -3.61902 | opp_overlap 790776 790773 GTCTACGAGAGATAA CGCACAAT TAA ATTATGCG ATATATTTAAATATA rlpA 791912 - 791247 - | rare lipoprotein A precursor OTT_0765 792964 - 793830 + | hypothetical protein OTT_0766 795282 - 794494 - | Mg-dependent DNase, TatD family metS 796829 - 795294 - | methionyl-tRNA synthetase TERM 634 797224 - 797244 + G 77 -9.9 -2.52742 | opp_overlap 797223 797227, overlap 797223 797227 GATATTCTATTAAGC CAATAAACT TAA AGTTTATTG ATATTGTAGCAAGGT priA 797016 - 798956 + | primosomal protein N virB3 799272 - 799559 + | type IV secretion system protein VirB3 TERM 635 800072 - 800061 - g 70 -4.4 -4.86033 | AAAGTCTGATAAAAA TGCA TGGA TGCA AAGTATGAATGAAAT TERM 636 801669 - 801694 + G 77 -4.1 -5.41746 | gap 1, opp_overlap 801653 CTCAATTAGTGATAC TCTGATTCAGCA AAC TGCT-ACTCAGA TTTTTTTACCAAATT virB4 799570 - 801987 + | type IV secretion system protein VirB4 TERM 637 803079 - 803089 + G 83 -6.8 -4.76423 | CGTCACATGCGCAGG GCAG TTA CTGC TTTTATGTGTTTATA TERM 638 803718 - 803730 + G 71 -5.5 -4.7173 | TTGGCTCCTATATTT GTACC TAT GGTGC TTTTTGAATATACTA TERM 639 803992 - 803980 - g 72 -3.4 -5.14965 | ATGCTGACCAAAAAA TTGC TAGAT GCAA AAAAAGTTTAGGATG virB6 801987 - 804434 + | type IV secretion system protein VirB6 virB6 804456 - 808343 + | type IV secretion system protein VirB6 virB6 808397 - 811669 + | type IV secretion system protein VirB6 virB6 811662 - 814226 + | type IV secretion system protein VirB6 proP2 814263 - 815516 + | proline/betaine transporter mutL 815544 - 817586 + | DNA mismatch repair protein MutL1 gltX1 817767 - 819113 + | glutamyl-tRNA synthetase cysS 819178 - 820614 + | cysteinyl-tRNA synthetase OTT_0779 821001 - 821603 + | transposase TERM 640 822312 - 822298 - g 71 -2.9 -5.23765 | GAAATAAGAGAAAAA TATCA ACAAG TGATA AGTTCTATACTCAAG OTT_0780 822259 - 822534 + | transposase OTT_0781 822940 - 823617 + | hypothetical protein OTT_0782 823677 - 825029 + | hypothetical protein OTT_0783 825667 - 825473 - | transposase OTT_0784 825959 - 825630 - | transposase TERM 641 826715 - 826683 - H 93 -12.4 -2.84192 | opp_overlap 826688, overlap 826688 TATACTACTAGTATA GCAAATTATTATAA CTATT TTATAATAATTTGC TGTCGCTATGACCTA rpmG 827027 - 827197 + | 50S ribosomal protein L33 rpsP 827206 - 827529 + | 30S ribosomal protein S16 OTT_0787 829048 - 829281 + | transposase TERM 642 829661 - 829645 - g 71 -2.3 -5.38951 | overlap 829652 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAATAAAAAA OTT_0788 829497 - 829694 + | transposase rplT 831820 - 831455 - | 50S ribosomal protein L20 rpmI 832046 - 831840 - | 50S ribosomal protein L35 htpG 832488 - 834380 + | heat shock protein HtpG TERM 643 834409 - 834429 + F 80 -6.3 -4.90266 | overlap 834410 AATCTTTCAATTATC TTTATAACA TTT TGTTATAAG TTTTTGATTGATGAA TERM 644 834410 - 834428 + F 71 -7.6 -3.53437 | overlap 834409 ATCTTTCAATTATCT TTATAACA TTT TGTTATAA GTTTTTGATTGATGA TERM 645 834598 - 834631 + G 70 -6.1 -4.30833 | GTTAATAAGCTTTAA GTCTGTTACACCA AATGATAA TGGTGCAATAGAC TTTATTACTAATTTA dapE 834545 - 835711 + | succinyl-diaminopimelate desuccinylase TERM 646 836271 - 836238 - g 72 -3.4 -5.21236 | gap 1, opp_overlap 836243 836245, overlap 836243 AATGCAGAAGAAAAA GATATTACAGTAGAT GTTAA ATTTACTGTA-TATC CTGAAATTGAAATTC tig 835863 - 837332 + | trigger factor TERM 647 837514 - 837498 - T 75 -3.7 -5.40072 | overlap 837501 TGCTGTTGAAAAAAA CAGCATT GGA AATGGTG TTAAGGCAGACATAG msbA1 839525 - 837855 - | multidrug resistance protein TERM 648 838256 - 838267 + g 74 -3 -5.47159 | opp_overlap 838244, overlap 838250 GCATAGTTTCTTGAG TAAC TAAA GTTA TTTTTTCTCTTAACA phoB 840380 - 839631 - | response regulator PhoB TERM 649 840049 - 840066 + g 72 -5.7 -4.49337 | opp_overlap 840049, overlap 840062 ATTTCTATCAAACCA TTATCAA ATTT TTGATAA TTTTCTACATTATCG TERM 650 840468 - 840454 - H 72 -7.2 -3.96447 | opp_overlap 840454, overlap 840436 840435 840450 TGATTAAAAAATCAA GTACTT TTA AAGTAC TTTTAAAGATACTTA TERM 651 840454 - 840468 + H 75 -7.2 -4.12902 | opp_overlap 840436 840435 840454 840450 TGATTAAAAAATCAA GTACTT TTA AAGTAC TTTTAAAGATACTTA TERM 652 840531 - 840495 - H 78 -9.9 -2.63347 | opp_overlap 840482 840503, overlap 840491 840503 CTTAATTATAACTGA GTTTATAATTATTTAAA AAT TTTAAATAATTATAAAT AAATAATAAATATTG rpsF 840673 - 841029 + | 30S ribosomal protein S6 TERM 653 841343 - 841330 - g 74 -5.3 -4.82756 | opp_overlap 841342, overlap 841342 AGAGAATTAACAAAA GCAAT TAAA ATTGC TAGAGAGCTTGCTCT rpsR 841075 - 841383 + | 30S ribosomal protein S18 rplI 841426 - 841941 + | 50S ribosomal protein L9 tlc1 842108 - 843583 + | ADP,ATP carrier protein homolog TERM 654 843617 - 843598 - T 75 -9.4 -2.51313 | opp_overlap 843595 843598, overlap 843593 ATATCCACAAGATAG GTCAAGAT AAGT ATCTTGAC TGATCTTAAAAATTA TERM 655 843598 - 843617 + T 75 -9.4 -2.74999 | opp_overlap 843598 843593, overlap 843595 ATATCCACAAGATAG GTCAAGAT AAGT ATCTTGAC TGATCTTAAAAATTA TERM 656 844890 - 844861 - T 71 -8.7 -2.92442 | opp_overlap 844856 844861 ATTTAACATATTATA GTAGCAGAATAAG ACTT CTAATTCTACTAC TGTGCTTTTCAGAAA OTT_0800 845419 - 844949 - | peroxiredoxin, AhpC/TSA family protein TERM 657 845022 - 845032 + g 76 -5.4 -4.93547 | opp_overlap 845022 TTTGGCCATATAGCA GCAA TTT TTGC TTTTTGATTGATTAA OTT_0801 845853 - 845428 - | putative integrase OTT_0802 846127 - 845909 - | putative integrase TERM 658 847000 - 846984 - g 71 -2.3 -5.38951 | overlap 846991 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0803 846650 - 847210 + | transposase TERM 659 847769 - 847739 - f 71 -2.7 -5.54894 | overlap 847742 AAGGTAGCAAAAAAA TAACTTTATAACT AGTTG AGTTATAAAGAAA AATTTAAATAAAAAT TERM 660 847766 - 847742 - f 95 -8.8 -4.8487 | overlap 847739 GTAGCAAAAAAATAA CTTTATAACT AGTTG AGTTATAAAG AAAAATTTAAATAAA OTT_0804 849423 - 850766 + | hypothetical protein TERM 661 850770 - 850741 - T 73 -2.9 -5.41143 | opp_overlap 850750 CATTTTTTAAAAAAA CTTCTTTACCTTC TCGT GAAGTTTAAAAAG TCTGCATTTTTAATG TERM 662 850979 - 851014 + T 95 -11.4 -3.92542 | opp_overlap 850978 850983, overlap 850983 ATATATCCATTATAT CAAACTCAAAGCTAGT TAAT ATTAACTTTGAGTTTG TTCTTTAGCAATCCA TERM 663 850983 - 851010 + T 74 -6.4 -4.56978 | opp_overlap 850978 850983, overlap 850979 ATCCATTATATCAAA CTCAAAGCTAGT TAAT ATTAACTTTGAG TTTGTTCTTTAGCAA trmU 852109 - 851000 - | tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase TERM 664 851887 - 851908 + g 87 -10.3 -3.62275 | GCACATAGTGTGGAA TTTGTAGCT GGTT AGCTACAAA TTTAGCATCATAAAT pccB 852357 - 852449 + | propionyl-CoA carboxylase beta chain precursor pccB 852468 - 852659 + | propionyl-CoA carboxylase beta chain precursor pccB 852801 - 852944 + | propionyl-CoA carboxylase beta chain precursor pccB 853380 - 853736 + | propionyl-CoA carboxylase beta chain precursor OTT_0810 853789 - 854004 + | hypothetical protein OTT_0811 854163 - 854459 + | hypothetical protein TERM 665 854662 - 854639 - T 74 -4 -5.24449 | GATAAAGTTAAAAAA GATATATTTT ATGC AAAAAATATC ATAGCAATCAAAAGT OTT_0812 855769 - 855461 - | transposase OTT_0813 855814 - 856188 + | transposase OTT_0814 856175 - 856309 + | transposase OTT_0815 856366 - 856740 + | transposase OTT_0817 857484 - 857182 - | transposase OTT_0816 856727 - 857233 + | transposase TERM 666 857584 - 857603 + Tr 70 -5 -4.66537 | opp_overlap 857584 TCCACTTATCCTAAA TTGGCGTT GTTT AAGGCCAA TTTTCTGTTGAACAG TERM 667 858278 - 858295 + Tr 71 -7.1 -3.76665 | opp_overlap 858278 858277, overlap 858276 TCGCTAGAAAACAAG GGAAATA ACCA TATTTCC TATTCTTTTCCTTCT nuoL2 860181 - 858709 - | NADH dehydrogenase I chain L TERM 668 859833 - 859845 + g 71 -7.7 -3.53091 | ATTTAGCCTGATTTG GCTCA CTA TGAGC TTTCAAAAAACCAAT TERM 669 860047 - 860024 - G 70 -8.2 -3.1478 | opp_overlap 860018 860016 860024, overlap 860013 860011 860022 AGTATTGCATTAATA GCATGCAATA TGGA TATTGCAAGC ATTAATATTTCTTTA nuoN2 861681 - 860191 - | NADH dehydrogenase I chain N OTT_0820 862075 - 861674 - | hypothetical protein OTT_0821 862487 - 862053 - | multisubunit Na+/H+ antiporter, MnhB subunit OTT_0822 863098 - 862508 - | multisubunit Na+/H+ antiporter, MnhB subunit TERM 670 862761 - 862742 - G 76 -7.2 -4.31904 | ACAAACTAACATAAA GCATACTG CAAA CAGTATAC ATACTAAGCTGCAAA OTT_0823 863424 - 863095 - | putative Na+/H+ antiporter subunit TERM 671 863773 - 863787 + r 90 -3.6 -5.9362 | TTTTAAGCTTATGTA TAGTGT TAA ACATTA TTTTTTTCTGTTTTC TERM 672 863996 - 864010 + r 70 -2.2 -5.38497 | ATAATGTTAATTATG TATTTG GGA TAAATA TTTTTTAGTTTAAAT OTT_0824 864837 - 863977 - | HAD superfamily protein involved in N-acetyl-glucosamine catabolism gyrB 864954 - 867377 + | DNA gyrase subunit B TERM 673 867378 - 867414 + T 81 -10.3 -2.65884 | opp_overlap 867379, overlap 867381 867384 AATTTAGATGTATAA ATATAATGCCAGCAGTA TAT TTTTGCTGGCATTATAA ATTATGCCTTACTGG TERM 674 867413 - 867379 - T 100 -11.7 -3.9534 | opp_overlap 867378 867381 867384 ATTTAGATGTATAAA TATAATGCCAGCA GTATATTTT TGCTGGCATTATA AATTATGCCTTACTG TERM 675 867381 - 867411 + T 93 -12 -2.61602 | opp_overlap 867379, overlap 867378 867384 TTAGATGTATAAATA TAATGCCAGCAGTA TAT TTTTGCTGGCATTA TAAATTATGCCTTAC TERM 676 867384 - 867408 + T 82 -9.3 -3.45321 | opp_overlap 867379, overlap 867381 867378 GATGTATAAATATAA TGCCAGCAGTA TAT TTTTGCTGGCA TTATAAATTATGCCT OTT_0826 867940 - 867416 - | hypothetical protein TERM 677 868597 - 868613 + G 83 -10.9 -2.79023 | overlap 868594 GAATTAACATTTGGA GCTGCTA CTG TAGCAGC TAGTTGGTCAGCTTA TERM 678 868905 - 868915 + G 84 -5.4 -5.43553 | overlap 868902 TAACAGCACTTTGGT TGGA GCA TCCA TTTTATTTTTTGCAT TERM 679 868988 - 868977 - g 70 -4.4 -4.8143 | opp_overlap 868977 TGAAGAATGTAAAAA TCCT ACAA AGGA TTTGACAGTGGGTAT atrC1 868246 - 869664 + | cationic amino acid transporter-1 TERM 680 870322 - 870336 + T 75 -3.6 -5.55695 | TACTCTTATGTATAA TAGTGT TAA ACATTA TTTTTTATATTCTTC OTT_0828 870929 - 870801 - | transposase TERM 681 871011 - 871027 + H 70 -2.3 -5.38951 | TTTTTTCTTTGGTAA TTCAGAA CTA TTGTGAA TTTTTTGTATACCTT TERM 682 874032 - 874044 + G 87 -7.7 -4.74706 | TGGGTTACTACCTTT CCATG TGC CATGG TTTTTAAATATTGGC TERM 683 874275 - 874249 - g 83 -9.8 -3.80733 | opp_overlap 874249 TCCATTGTACAACAA TTTATTATTAAT AAG ATTAATAATAAA TGAAAGAAGTTATAT OTT_0829 872575 - 874278 + | 60 kD inner-membrane protein TERM 684 874786 - 874803 + GF 70 -8.5 -2.66216 | opp_overlap 874789, overlap 874785 874789 ATAGTTTAATAGCTA CAAGCAA AAAT TTGCTTG ATTATAATGATAAAA OTT_0830 874275 - 874898 + | Era/Obg family GTP-binding protein argB 874846 - 875787 + | acetylglutamate kinase OTT_0832 876085 - 875885 - | transposase TERM 685 876032 - 876048 + g 71 -2.3 -5.38951 | overlap 876029 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT TERM 686 876811 - 876829 + r 70 -3.2 -5.35459 | TATCCTAGTAGTTTT CTATAATA ATT TATTCTAG TTTTTTGTAATCTAT OTT_0833 877111 - 876860 - | transposase TERM 687 876933 - 876952 + g 80 -7.2 -4.6038 | gap 1, opp_overlap 876933, overlap 876928 ATTTTTGCATTATAA CCTT-TGGC TGG GCCATAAGG TTTTACTTTAATATC TERM 688 877266 - 877233 - R 80 -9.1 -3.51778 | opp_overlap 877233, overlap 877231 TTATCAGACTAAATA TAGGTTGTATTAAAA TTTT TCTTTATACAACCTA TTTTCAAGAGCTTTT TERM 689 877233 - 877266 + r 72 -6.9 -4.10855 | opp_overlap 877233 877231 TTATCAGACTAAATA TAGGTTGTATTAAAA TTTT TCTTTATACAACCTA TTTTCAAGAGCTTTT sca1 880146 - 877294 - | cell surface antigen gmk 880945 - 880280 - | guanylate kinase TERM 690 881120 - 881090 - R 89 -11.4 -2.87252 | opp_overlap 881092 881094, overlap 881087 881092 881094 CAAGAAGAGCAATTA CATATAAAAGCTCA AAA TTAGCTTTTATATG TGTAAAATATAATGT TERM 691 881118 - 881092 - R 70 -8.2 -2.97381 | opp_overlap 881092 881094, overlap 881090 881087 881094 AGAAGAGCAATTACA TATAAAAGCTCA AAA TTAGCTTTTATA TGTGTAAAATATAAT OTT_0836 881926 - 881162 - | hypothetical protein cutA 883041 - 882685 - | periplasmic divalent cation tolerance protein ffh 884451 - 883099 - | signal recognition particle protein TERM 692 883336 - 883358 + g 77 -7.9 -4.10429 | TAACTTTACATTGTT TTGATCAAA TGGAT TTTGATCAA TTTTCGGCAATAGTT TERM 693 883599 - 883610 + g 74 -3 -5.34555 | CTGGATGAAATTCCT CTAA ATCA TTAG TTTTTTCTCCTGTGC OTT_0839 885822 - 885541 - | hypothetical protein xseB 885876 - 886115 + | exodeoxyribonuclease small subunit TERM 694 887153 - 887131 - T 83 -10 -3.1577 | opp_overlap 887136, overlap 887136 887146 AGCTAATACTTAACA TATAAGCCTC TGA AAGGCTTATA ACGCCAAATTAGGAT OTT_0841 887531 - 887229 - | transposase OTT_0842 887975 - 887604 - | transposase TERM 695 888942 - 888926 - g 73 -8.1 -3.54574 | overlap 888935 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 696 889088 - 889113 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 889088 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_0843 888488 - 889450 + | transposase TERM 697 889494 - 889444 - f 100 -13.3 -2.84098 | opp_overlap 889444 889448, overlap 889448 889451 889454 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 698 889444 - 889494 + F 100 -13.3 -4.84262 | opp_overlap 889444 889448 889451 889454, overlap 889448 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 699 889490 - 889448 - f 80 -8.3 -4.10331 | opp_overlap 889448 889444, overlap 889444 889451 889454 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 700 889448 - 889490 + F 91 -8.3 -4.91657 | opp_overlap 889444 889448 889451 889454, overlap 889444 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 701 889639 - 889623 - f 75 -9.5 -2.60901 | opp_overlap 889623, overlap 889622 ATATTTGCAAGTAAT GGTGAAA TTA TTTCACC TTTGGAAGCACCAGA TERM 702 889623 - 889639 + F 84 -9.5 -3.53012 | opp_overlap 889623 889622 ATATTTGCAAGTAAT GGTGAAA TTA TTTCACC TTTGGAAGCACCAGA OTT_0844 890215 - 890589 + | transposase OTT_0845 890576 - 890710 + | transposase OTT_0846 890767 - 891141 + | transposase OTT_0847 891128 - 891634 + | transposase OTT_0848 892347 - 892171 - | transposase OTT_0849 892729 - 893406 + | hypothetical protein fumC 893470 - 894870 + | fumarate hydratase tppB 896514 - 895036 - | tripeptide permease TppB, putative POT family peptide transport protein TERM 703 896397 - 896385 - G 87 -5.5 -5.55698 | GAGAAGTTAAAAAAA GCACT AAA AGCGC CCTCATTCCATAATA TERM 704 896609 - 896599 - R 76 -4 -5.52384 | GCTTCATTAAAAAAA GATT AAC AATC AAAATTATATTTATG TERM 705 896644 - 896659 + r 82 -2.6 -5.95946 | ATAAATCATAACTTA TATCGA ATTT TTGATA TTTTTTTATTCTTAA TERM 706 897241 - 897261 + r 80 -4.1 -5.64328 | opp_overlap 897242, overlap 897242 897256 ATTATAATATAAATT ATTTTACTT TGC AAGTAAAAG TTTTATTTTTTTATT TERM 707 897242 - 897260 + r 75 -7.6 -3.93106 | opp_overlap 897242, overlap 897241 897256 TTATAATATAAATTA TTTTACTT TGC AAGTAAAA GTTTTATTTTTTTAT TERM 708 897256 - 897266 + r 78 -2.6 -5.88565 | opp_overlap 897242, overlap 897242 897241 ATTTTACTTTGCAAG TAAA AGT TTTA TTTTTTTATTATAGA TERM 709 898216 - 898265 + r 74 -8.9 -2.85947 | opp_overlap 898214 898216, overlap 898214 898212 898218 898220 ATAAAAATGGAAATA TATAGCTAAACAAGTATATAATA TGAC TTTTTTATGCTGGTTTAGCTATA TCATCTTATATTAAA TERM 710 899419 - 899447 + r 80 -9.1 -3.66844 | GTTACGTAATATCGG GTTGATGAAATAT ATT ATATTTGATCAAC TTGTTGCGATATAAA OTT_0852 901238 - 899766 - | ankyrin repeat-containing protein 13 OTT_0853 901851 - 901633 - | transposase TERM 711 901666 - 901682 + g 71 -2.3 -5.38951 | overlap 901663 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT TERM 712 902263 - 902249 - g 71 -2.9 -5.23765 | GAAATAAGAGAAAAA TATCA ACAAG TGATA AGTGCTATACCTAAG OTT_0854 901889 - 902749 + | transposase OTT_0855 904668 - 902734 - | putative conjugative transfer protein TraG TERM 713 903858 - 903803 - G 76 -8.6 -3.49653 | gap 1, opp_overlap 903803, overlap 903820 ATCATTCCTAGACAA TGGATTATTGTAAAAAATACTGGCCAG CTG CTGACCCATATTATTAACAA-AATCCA TGTTTTGAGTATGTT TERM 714 903842 - 903820 - G 75 -4.8 -5.06451 | opp_overlap 903803, overlap 903803 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAACAAAATCC TERM 715 904651 - 904640 - G 72 -5.8 -4.41422 | TTAGATACAAAATAA CTCG TTTG CGAG GAAAGAGAAGCAAAC TERM 716 904707 - 904757 + r 100 -13.3 -2.84098 | opp_overlap 904707 904711, overlap 904711 904714 904717 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 717 904757 - 904707 - R 100 -13.3 -4.84262 | opp_overlap 904707 904711 904714 904717, overlap 904711 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 718 904753 - 904711 - R 91 -8.3 -4.91657 | opp_overlap 904707 904711 904714 904717, overlap 904707 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 719 904711 - 904753 + r 80 -8.3 -4.10331 | opp_overlap 904711 904707, overlap 904707 904714 904717 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0856 905713 - 904751 - | transposase TERM 720 905113 - 905088 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 905088 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 721 905259 - 905275 + g 73 -8.1 -3.54574 | overlap 905256 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_0857 906225 - 905890 - | putative conjugative transfer protein TraG OTT_0858 906704 - 906225 - | putative conjugative transfer protein TraH OTT_0859 907528 - 906899 - | putative conjugative transfer protein TraH OTT_0860 908223 - 907525 - | putative conjugative transfer protein TraF OTT_0861 908504 - 908220 - | putative conjugative transfer protein TraN TERM 722 908799 - 908781 - H 74 -8.2 -3.57901 | overlap 908779 TGGATGAAAAATATA TACCAACC TAA GGTTGATA AAGCGGTTTGGAAGT OTT_0862 908934 - 909791 + | putative integrase OTT_0863 909760 - 910131 + | putative integrase OTT_0864 910747 - 910448 - | hypothetical protein OTT_0865 910731 - 911870 + | reverse transcriptase OTT_0866 912283 - 912897 + | putative conjugative transfer protein TraH OTT_0867 912962 - 913177 + | putative conjugative transfer protein TraH OTT_0868 913101 - 913361 + | putative conjugative transfer protein TraH OTT_0869 913342 - 913704 + | putative conjugative transfer protein TraD TERM 723 913733 - 913708 - gT 70 -4.7 -4.67168 | overlap 913709 AAAAAGCGCTAAAAA GGCCTCGAAAA TCTG TTTTGGAGGCT TGCCATTAGTAAAGA TERM 724 913732 - 913709 - gT 73 -8.2 -3.38674 | overlap 913708 AAAAGCGCTAAAAAG GCCTCGAAAA TCTG TTTTGGAGGC TTGCCATTAGTAAAG OTT_0870 913661 - 914935 + | putative conjugative transfer protein TraD TERM 725 914923 - 914957 + T 79 -6.7 -4.67173 | opp_overlap 914924 914929, overlap 914921 914925 CAAAAAACTTAAGTT AGTAGAGTATTAATT CGAAA AATTAATACTCTATG TTATTTTTTAAATTA TERM 726 914956 - 914924 - T 70 -8.7 -2.61943 | opp_overlap 914923 914921 914925, overlap 914929 AAAAAACTTAAGTTA GTAGAGTATTAATTC GAA AAATTAATACTCTAT GTTATTTTTTAAATT TERM 727 914925 - 914955 + T 95 -11.5 -3.92369 | opp_overlap 914924 914929, overlap 914923 914921 AAAAACTTAAGTTAG TAGAGTATTAATT CGAAA AATTAATACTCTA TGTTATTTTTTAAAT OTT_0871 915370 - 914945 - | putative transposase TERM 728 916041 - 916025 - g 73 -8.1 -3.54574 | overlap 916034 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 729 916187 - 916212 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 916187 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_0872 915587 - 916549 + | transposase TERM 730 916543 - 916593 + T 100 -13.3 -4.84262 | opp_overlap 916543 916547 916550 916553, overlap 916547 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 731 916593 - 916543 - T 100 -13.3 -2.84098 | opp_overlap 916543 916547, overlap 916547 916550 916553 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 732 916589 - 916547 - T 80 -8.3 -4.10331 | opp_overlap 916543 916547, overlap 916543 916550 916553 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 733 916547 - 916589 + T 91 -8.3 -4.91657 | opp_overlap 916547 916543 916550 916553, overlap 916543 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_0873 917125 - 916565 - | putative transposase TERM 734 916774 - 916800 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTGTAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT OTT_0874 918295 - 917177 - | putative conjugative transfer protein TraI TERM 735 918403 - 918436 + H 95 -10.7 -4.13767 | ATAATCGCATTGCTT TATTTATCAATTTAA TATA TTAGATTGATAAATA TTTTAGGGTGACAAA OTT_0875 918456 - 920111 + | ankyrin repeat-containing protein 10_02 OTT_0876 920964 - 920140 - | putative conjugative transfer protein TraA OTT_0877 921689 - 920979 - | putative conjugative transfer protein TraA OTT_0878 922984 - 921674 - | putative conjugative transfer protein TraA OTT_0879 923262 - 923717 + | putative conjugative transfer protein TraD OTT_0880 924831 - 923785 - | hypothetical protein TERM 736 924960 - 924931 - R 74 -8.7 -3.30214 | opp_overlap 924939 AATTCACTACATTAA CCACCTATTAAAC TTTA GTTTATTAGGTAG CATAAAGCTCACAGT OTT_0881 925108 - 924953 - | RelA/SpoT-related protein OTT_0882 925540 - 925148 - | RelA/SpoT-related protein OTT_0883 926076 - 925582 - | hypothetical protein OTT_0884 927033 - 926095 - | hypothetical protein OTT_0885 927292 - 927056 - | hypothetical protein OTT_0886 927418 - 927717 + | N6 adenine-specific DNA-methyltransferase TERM 737 928312 - 928328 + F 70 -3.1 -5.29385 | opp_overlap 928312 TATTCTAAACTGAAA TTAAAAG TGA TTTTTAA TTTTTTGCTTAAGTT OTT_0887 928484 - 930148 + | repeat-containing protein A_04 OTT_0888 931670 - 930237 - | replicative DNA helicase OTT_0889 932993 - 931695 - | hypothetical protein TERM 738 932467 - 932481 + g 74 -8.6 -3.25459 | opp_overlap 932464 932460, overlap 932465 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGCGTTAGT TERM 739 932865 - 932840 - G 73 -9.1 -2.93858 | opp_overlap 932853 932855 TATTATATCTATATA TGTACCTGAAA CTTT TTTCAGGTTCA CCTGAAATTTCTTTC TERM 740 932853 - 932896 + g 79 -4.9 -5.16572 | opp_overlap 932840, overlap 932855 TATGTACCTGAAACT TTTTTCAGGTTCA-CCTGAAA TTTC TTTCAGGTTGGAGC-GAAAAA TTTTTTGGGTTAGAT TERM 741 932855 - 932872 + g 88 -8.5 -4.46233 | opp_overlap 932840, overlap 932853 TGTACCTGAAACTTT TTTCAGG TTCA CCTGAAA TTTCTTTCAGGTTGG TERM 742 932938 - 932958 + g 95 -9.1 -5.08011 | TCTCCTTTTTTTTCT TTTTCAGTG AAA CGCTGAAAA TTTTTTAGAAGTTTT OTT_0890 933618 - 933953 + | transposase OTT_0891 934370 - 934161 - | putative conjugative transfer protein TraD OTT_0892 934570 - 934866 + | putative conjugative transfer protein TraA OTT_0893 935042 - 935236 + | putative conjugative transfer protein TraA TERM 743 935390 - 935360 - f 90 -3.4 -5.97575 | gap 1, opp_overlap 935379, overlap 935381 AATCTACAAAAAAAA TGTTGCTAACCTG ATAGAG CAGCTTAGCA-CA GCTAAGACAGATTCT TERM 744 937322 - 937352 + G 82 -6.2 -5.10077 | opp_overlap 937326, overlap 937326 TTTCTTTGATAAAGC TAAAGAAGCAGTTG TAA CAGTTGCTTCTTCG TTTTTTAAACTATTT TERM 745 937326 - 937348 + G 81 -9.2 -3.93769 | opp_overlap 937326, overlap 937322 TTTGATAAAGCTAAA GAAGCAGTTG TAA CAGTTGCTTC TTCGTTTTTTAAACT TERM 746 937461 - 937499 + G 72 -3.3 -5.243 | gap 1, opp_overlap 937465 937467 937470, overlap 937463 937466 937467 GATATAAATGAAAAC GATACAGAAGCTATAGGA GAAG TTCTATAGCTTC-GTCTG TTTTTTAATAGTTTG OTT_0894 935892 - 937490 + | hypothetical protein TERM 747 937466 - 937495 + T 76 -8.7 -3.69447 | opp_overlap 937465 937467 937470, overlap 937463 937461 937467 AAATGAAAACGATAC AGAAGCTATAGGA GAAG TTCTATAGCTTCG TCTGTTTTTTAATAG TERM 748 937467 - 937494 + T 93 -12.2 -2.80583 | opp_overlap 937465 937467 937470, overlap 937466 937463 937461 AATGAAAACGATACA GAAGCTATAGGA GAAG TTCTATAGCTTC GTCTGTTTTTTAATA TERM 749 937494 - 937467 - T 81 -10 -3.12207 | opp_overlap 937467 937466 937463 937461, overlap 937465 937470 AATGAAAACGATACA GAAGCTATAGGA GAAG TTCTATAGCTTC GTCTGTTTTTTAATA TERM 750 937796 - 937786 - T 76 -4 -5.40004 | TACTAAAGCAAAAAA TACA GAT TGTA AAATTGGAATCATAC grxC 938295 - 937912 - | glutaredoxin 3 TERM 751 938511 - 938523 + r 74 -4.9 -5.11033 | TATTGCCTTAGTTAT TATGA AAG TCATA TTTTTTCGAATTATA OTT_0896 938931 - 938503 - | hypothetical protein OTT_0897 939832 - 939029 - | hypothetical protein OTT_0898 940447 - 939845 - | hypothetical protein OTT_0899 940865 - 940440 - | hypothetical protein TERM 752 940677 - 940661 - G 72 -5.1 -4.78107 | GATCATTAGTAAAAA GAGCTAT GTT AAAGCTC AATTCATAAGTTATT OTT_0900 941206 - 940865 - | hypothetical protein OTT_0901 941753 - 941208 - | hypothetical protein OTT_0902 942902 - 941787 - | hypothetical protein TERM 753 942053 - 942063 + g 74 -4 -5.243 | GTATTCCTAGGATTG TTTG TGG CAAA TTTTTTGATAATTTA OTT_0903 943468 - 942914 - | hypothetical protein TERM 754 943965 - 943927 - R 100 -17.9 -4.11404 | opp_overlap 943929 943935 TCTAGATCACAGAAA TAGCCAAACTATTATAA CTGTT TTATAATAGTTTGGCTA TATGCATAAATTTTA TERM 755 943929 - 943963 + r 100 -16.1 -2.92656 | opp_overlap 943927, overlap 943935 TAGATCACAGAAATA GCCAAACTATTATAA CTGTT TTATAATAGTTTGGC TATATGCATAAATTT OTT_0904 945096 - 944140 - | hypothetical protein ftsZ 946531 - 945179 - | cell division protein FtsZ TERM 756 946186 - 946206 + g 76 -9.7 -3.14881 | opp_overlap 946186 CAATTCTTGCAACTA CTGGAGCTG CGC CGGTTCCAG TTCCTCCACCCATTC murA 948001 - 946736 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 757 947781 - 947757 - G 74 -8.7 -3.2812 | opp_overlap 947760, overlap 947756 947760 CATGGAGGAGAAAAG TGACAGCTAAT GTT ATTAGCTGTTA ATGCAATAGTTCCGC TERM 758 947760 - 947778 + g 83 -10.4 -3.17688 | opp_overlap 947760 947757 947756 GGAGGAGAAAAGTGA CAGCTAAT GTT ATTAGCTG TTAATGCAATAGTTC TERM 759 947778 - 947760 - G 81 -10.4 -2.81535 | opp_overlap 947760, overlap 947757 947756 GGAGGAGAAAAGTGA CAGCTAAT GTT ATTAGCTG TTAATGCAATAGTTC TERM 760 948381 - 948351 - H 81 -8.5 -4.09685 | TTTGATTTTTTAAAA TCATAACTCTAAA TTATT TTTAGCGTTATGA AGAAAGTATAATATC TERM 761 948770 - 948805 + H 90 -10.8 -3.36273 | opp_overlap 948768 948774, overlap 948774 948778 TATATGCAATCTATA TTAACTGAGTATAAAT AATT ATTTATGCTTAGTTAA TTAATATTAAAAGGG OTT_0907 948826 - 949521 + | hypothetical protein OTT_0908 951943 - 951098 - | hypothetical protein TERM 762 951431 - 951421 - G 71 -5.4 -4.66987 | opp_overlap 951421 TATATCTTAATAAAA TCCA TAT TGGA CTTAATGTTTTGGTA TERM 763 951831 - 951821 - G 86 -4 -5.86332 | GGAAGCTAAAAAAAA CATT ACA AATG GAAAAATTGATAACA TERM 764 952257 - 952240 - R 95 -4.9 -5.93809 | opp_overlap 952256 TGCCCATAAAAAAAA TAAGACT TAAA AGTCCTA ATATGCGCTGCAATT TERM 765 953077 - 953093 + r 70 -2.3 -5.38951 | TTTTTTCTTTTGCAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTT_0909 953459 - 953355 - | transposase OTT_0910 954333 - 954103 - | hypothetical protein nuoA 954538 - 954909 + | NADH dehydrogenase I chain A nuoB 954922 - 955437 + | NADH dehydrogenase I chain B nuoC 955448 - 956038 + | NADH dehydrogenase I chain C nuoD 956050 - 957240 + | NADH dehydrogenase I chain D nuoE 957237 - 957791 + | NADH dehydrogenase I chain E nuoF 957809 - 959077 + | NADH dehydrogenase I chain F OTT_0917 960142 - 959381 - | hypothetical protein OTT_0918 961007 - 960633 - | transposase TERM 766 960843 - 960859 + g 71 -2.3 -5.38951 | overlap 960840 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATGCCTT OTT_0919 961486 - 961019 - | transposase TERM 767 963321 - 963336 + G 70 -6.2 -4.17556 | TGTATAGTATGGATT TTTGCT GTTA AGCAAA TTTATTCAGAATATA tlc5 961866 - 963365 + | ADP,ATP carrier protein homolog OTT_0921 963611 - 963967 + | hypothetical protein OTT_0922 963983 - 964384 + | hypothetical protein ruvC 964532 - 965011 + | holliday junction endodeoxyribonuclease RuvC nifR3 965068 - 966030 + | NifR3 protein OTT_0925 966403 - 966065 - | hypothetical protein TERM 768 967229 - 967213 - g 73 -8.1 -3.45088 | opp_overlap 967213 TTAAAAGAAATTCAA GGATTAT CAT ATAATCC TATATTGCAACAATG TERM 769 967213 - 967229 + G 70 -8.1 -3.07013 | opp_overlap 967213 TTAAAAGAAATTCAA GGATTAT CAT ATAATCC TATATTGCAACAATG ubiG 966559 - 967299 + | 3-demethylubiquinone-9 3-methyltransferase hemK 968152 - 967286 - | possible protoporphyrinogen oxidase truA 969005 - 968154 - | pseudouridylate synthase I rplM 969147 - 969629 + | 50S ribosomal protein L13 rpsI 969633 - 970124 + | 30S ribosomal protein S9 TERM 770 970963 - 970984 + G 100 -11.7 -3.98214 | CAATGGTATTGCTTT GGTCAGAAT TTTA ATTCTGACC TTTATGATACATACT OTT_0931 970459 - 971205 + | hypothetical protein OTT_0932 971622 - 971759 + | transposase TERM 771 971913 - 971897 - g 71 -2.3 -5.38951 | overlap 971904 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_0933 971749 - 972168 + | transposase OTT_0934 975428 - 975703 + | hypothetical protein TERM 772 976043 - 976032 - f 70 -3 -5.33785 | AATTAGTATAAAAAA TTTG ATAT CAAA AAAAGCATAATTTAT OTT_0935 976388 - 976582 + | putative integrase OTT_0936 976691 - 977332 + | putative integrase OTT_0937 977853 - 977389 - | hypothetical protein OTT_0938 978401 - 977850 - | putative conjugative transfer protein TraE OTT_0939 978724 - 978401 - | hypothetical protein OTT_0940 979908 - 978862 - | putative integrase TERM 773 979465 - 979477 + g 74 -6.3 -4.45115 | overlap 979456 979462 TTTATGCTGCTCTAT TCCTA GAG TAGGA TTGTTTTCTATTAAT sco2 981178 - 980528 - | Sco2 protein precursor TERM 774 981038 - 981064 + g 86 -3.1 -6.15259 | opp_overlap 981039, overlap 981039 GCTTGTGACCATAGA ATAGCTAATAT TATCT GTATTAGCTAC TTTTTTTTTAGATTG TERM 775 981039 - 981063 + g 74 -6.6 -4.26715 | opp_overlap 981039, overlap 981038 CTTGTGACCATAGAA TAGCTAATAT TATCT GTATTAGCTA CTTTTTTTTTAGATT TERM 776 981721 - 981703 - R 93 -9 -4.76213 | opp_overlap 981707, overlap 981689 ATAAATTTAAGAAAA TCTATTGA CAT TCAATAGA TTGGAAAGAAATTAT TERM 777 982391 - 982407 + r 70 -5.2 -4.5787 | GAGAACGGTGTCTAG TATGCT CTAAA AGCATA TGTTTTTTTTAGTAC TERM 778 983419 - 983442 + r 91 -3.8 -6.07969 | overlap 983420 TTTCTCTTATCCTAA TCTGGCGTTA AGAA TACCGTCAGG TTTTTTTTAGTTTTC TERM 779 983902 - 983922 + r 70 -5.5 -4.46105 | CATCTTTGTTTTTTT GATTATTAC TTG GTATTAATC TCTTTTTTTCTCACT OTT_0942 985072 - 984104 - | Sua5/YciO/YrdC family protein glyS 987101 - 985050 - | glycyl-tRNA synthetase beta chain TERM 780 985115 - 985095 - G 73 -8.3 -3.54741 | opp_overlap 985094 TATTACTTTGTCAAA TGGTGCTAT ATT ATTGCACCA CTGTACTACATGTTG glyQ 987972 - 987094 - | glycyl-tRNA synthetase alpha chain TERM 781 988345 - 988334 - H 72 -5.8 -4.49337 | opp_overlap 988333 988334 TTACAATGGATAAAA CGCT TTGA AGCG ATATTTTTAACACAG TERM 782 989577 - 989564 - g 75 -8.1 -3.66844 | opp_overlap 989564 989555, overlap 989565 GTTACAGCTCAAGAA GCAGC AGCA GCTGC AGCTGTTAGGGCTTT OTT_0945 988517 - 990067 + | 56 kDa type-specific antigen TERM 783 990091 - 990124 + F 100 -9.7 -4.67168 | opp_overlap 990091, overlap 990094 990103 TAAAATTATAAAAAA GCAGCTAAAAGTCCT TTGA AGGGTTTTTAGCTAC TTTTTCAGAGTTTTT TERM 784 990124 - 990091 - f 95 -7.5 -5.4588 | opp_overlap 990091 990094 990103 TAAAATTATAAAAAA GCAGCTAAAAGTCCT TTGA AGGGTTTTTAGCTAC TTTTTCAGAGTTTTT TERM 785 990094 - 990121 + F 83 -10 -3.24823 | opp_overlap 990091, overlap 990091 990103 AATTATAAAAAAGCA GCTAAAAGTCCT TTGA AGGGTTTTTAGC TACTTTTTCAGAGTT TERM 786 990216 - 990232 + F 83 -6.6 -4.98255 | opp_overlap 990214 990216 ATATATAGAAATATA CTCCTA AAATG TAGGAG TTTTTGTAATTAGGA OTT_0946 990294 - 991028 + | 56 kDa type-specific antigen-like protein murC 991196 - 992704 + | UDP-N-acetylmuramate-alanine ligase murB 992673 - 993584 + | UDP-N-acetylenolpyruvoylglucosamine reductase ddl 993562 - 994536 + | D-alanine-D-alanine ligase TERM 787 994614 - 994589 - g 82 -2.7 -6.01187 | opp_overlap 994596 994605, overlap 994590 994596 994606 AATCAAACAAAAAAA GTTAAAAGAAT CAAT ATTCCTTTAAG GAGATCTATTATTAA TERM 788 994613 - 994590 - g 70 -6.2 -4.17052 | opp_overlap 994596 994605, overlap 994589 994596 994606 ATCAAACAAAAAAAG TTAAAAGAAT CAAT ATTCCTTTAA GGAGATCTATTATTA ftsQ 994547 - 995359 + | cell division protein FtsQ TERM 789 995989 - 995979 - g 71 -5.4 -4.55118 | TAATGTGATAGAAAA TTGC TTA GCAA GTATATCACTAGAAA recF 995380 - 996516 + | RecF protein OTT_0952 996996 - 996667 - | transposase OTT_0953 997457 - 997567 + | putative conjugative transfer protein TraH OTT_0954 997773 - 997991 + | transposase OTT_0955 998034 - 998474 + | transposase OTT_0956 1000160 - 999750 - | hypothetical protein TERM 790 999991 - 1000007 + g 72 -7.3 -3.80858 | opp_overlap 999987 999991 999994 ACTTTGAACAATATA GAGTTAG AAC CTAGCTC TTTACTAAGTTCTGA TERM 791 1000046 - 1000058 + g 72 -3.4 -5.1861 | CTTCATCACTTATTT GTTG CTGTA CAAC TTTTTTGATACTCCG invA 1000516 - 1001001 + | invasion protein A TERM 792 1001978 - 1001968 - f 71 -2.6 -5.53288 | opp_overlap 1001968 GCTAACTTAAAAAAA TATA TGT TATA TTTTTTCTCATAAGC OTT_0958 1002066 - 1002185 + | putative conjugative transfer protein TraA OTT_0959 1002249 - 1002359 + | putative conjugative transfer protein TraA OTT_0960 1002399 - 1004615 + | putative conjugative transfer protein TraA TERM 793 1005045 - 1005056 + T 73 -3 -5.39221 | TATTATCTTTTTTTT GAAT AATC ATTC TTTTTTACTTCTTGT secA1 1007745 - 1005106 - | preprotein translocase SecA subunit TERM 794 1008241 - 1008213 - g 88 -9.1 -4.19506 | overlap 1008216 ATGTCAAGCTCAAAA TAATGATCAAAGT AAA ACTTCAATCATTA ATAACAACAACAAAA TERM 795 1008238 - 1008216 - g 70 -6.4 -4.21933 | overlap 1008213 TCAAGCTCAAAATAA TGATCAAAGT AAA ACTTCAATCA TTAATAACAACAACA prsA 1008139 - 1009170 + | protein export protein PrsA precursor folC 1010611 - 1009271 - | folylpolyglutamate synthase thrS 1010862 - 1012808 + | threonyl-tRNA synthetase infC 1012861 - 1013364 + | translation initiation factor IF-3 dut 1013531 - 1013977 + | deoxyuridine 5-triphosphate nucleotidohydrolase TERM 796 1014271 - 1014251 - g 75 -4.8 -5.098 | gap 1 GAAAAATAAAATAAA CTTGAT-GG ACTA CCTATCAAG TGCATATGAACTGGA atpH 1014072 - 1014617 + | ATP synthase delta chain TERM 797 1015104 - 1015132 + G 83 -10.5 -3.13403 | overlap 1015103 GAGCCTATGTATACT GGTATTAAAGC TATTGAT GCTTTAATACC TATTGGTAAAGGGCA atpA 1014660 - 1016198 + | ATP synthase alpha chain atpG 1016213 - 1017103 + | ATP synthase gamma chain OTT_0970 1017746 - 1017114 - | hypothetical protein TERM 798 1017689 - 1017662 - G 100 -13 -4.09818 | opp_overlap 1017669, overlap 1017655 AATATGAACCATAAA TATGGCATAATA ATAT TATTATGCCATA TAGCACTATCTTGAA OTT_0971 1019352 - 1017748 - | hypothetical protein TERM 799 1018583 - 1018619 + g 75 -9.7 -2.8214 | overlap 1018593 TATATATACTCAGGG CTTTTAGTAGCGCAATA TGG TATTGTGTTACTAAAAA TAATATTCTGCTGAT TERM 800 1020075 - 1020051 - g 71 -7.8 -3.52896 | overlap 1020055 TGATCATGGAGACAA GATACCAGGC GGACT GCCTGGAACC AAAGATGAAAATGGT TERM 801 1020071 - 1020055 - g 78 -9.4 -3.23332 | overlap 1020051 CATGGAGACAAGATA CCAGGC GGACT GCCTGG AACCAAAGATGAAAA TERM 802 1021429 - 1021451 + G 95 -10.6 -4.41348 | opp_overlap 1021429 ATGCCATTTGATCAA GCGATAGCTC ATG GAGCTGTTGC TTTGTTTGAAGAAAA TERM 803 1021893 - 1021874 - g 79 -8 -4.05067 | opp_overlap 1021874 1021873, overlap 1021872 TAGTTTACAAAAATA TTGAAGAT TATG ATCTTCAA ATTGTTAGAAAAGCT alaS 1019494 - 1022163 + | alanyl-tRNA synthetase gltX2 1022339 - 1023787 + | glutamyl-tRNA synthetase sufA 1024140 - 1023796 - | SufA protein argS 1024306 - 1026078 + | arginyl-tRNA synthetase OTT_0976 1026090 - 1026821 + | hypothetical protein OTT_0977 1026884 - 1027078 + | transposase OTT_0978 1028055 - 1027765 - | transposase TERM 804 1028750 - 1028730 - g 95 -9.1 -5.08011 | AAAACTTCTAAAAAA TTTTCAGCG TTT CACTGAAAA AGAAACAAAAGGAGA TERM 805 1028835 - 1028792 - g 79 -4.9 -5.16572 | opp_overlap 1028823, overlap 1028816 ATCTAACCCAAAAAA TTTTTC-GCTCCAACCTGAAA GAAA TTTCAGG-TGAACCTGAAAAA AGTTTCAGGTACATA TERM 806 1028833 - 1028816 - g 88 -8.5 -4.46233 | opp_overlap 1028823, overlap 1028792 CCAACCTGAAAGAAA TTTCAGG TGAA CCTGAAA AAAGTTTCAGGTACA TERM 807 1028823 - 1028848 + G 73 -9.1 -2.93858 | opp_overlap 1028816 1028792 GAAAGAAATTTCAGG TGAACCTGAAA AAAG TTTCAGGTACA TATATAGATATAATA TERM 808 1029221 - 1029207 - g 74 -8.6 -3.25459 | opp_overlap 1029204 1029200, overlap 1029205 ACTAACGCCAGAAGA TGCAGT TAT ACTGCA ACGTATGTCTAGTAG OTT_0979 1028515 - 1030044 + | hypothetical protein OTT_0980 1030053 - 1031489 + | replicative DNA helicase OTT_0981 1031903 - 1032298 + | RelA/SpoT-related protein OTT_0982 1032433 - 1032981 + | ankyrin repeat-containing protein 03_06 OTT_0983 1033028 - 1033576 + | hypothetical protein OTT_0984 1034389 - 1033580 - | N6 adenine-specific DNA-methyltransferase TERM 809 1034813 - 1034793 - g 84 -5.6 -5.40873 | AACAGAAAAATAAAA GTATATTT AATAA AAATATAC AGTCAAAACTGTTAC OTT_0985 1034756 - 1035034 + | hypothetical protein TERM 810 1035015 - 1035044 + F 71 -7.3 -3.79633 | gap 1, opp_overlap 1035011 1035015 1035018, overlap 1035013 1035018 TATGTCATATACCAA TC-AGCTTAGCTAA CTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 811 1035018 - 1035040 + F 100 -13.6 -3.55453 | opp_overlap 1035011 1035018 1035015, overlap 1035015 1035013 GTCATATACCAATCA GCTTAGCTAA CTG TTAGCTAAGC TTGCTATTTTAAATT TERM 812 1035040 - 1035018 - f 100 -13.6 -2.83345 | opp_overlap 1035015 1035013 1035018, overlap 1035011 1035015 GTCATATACCAATCA GCTTAGCTAA CTG TTAGCTAAGC TTGCTATTTTAAATT TERM 813 1035084 - 1035070 - f 70 -2.9 -5.20328 | TTCTAAAAAAACAAA GTTAA TAAAC TTAAC CATAGGAGAATAATA OTT_0986 1035099 - 1035800 + | hypothetical protein TERM 814 1035843 - 1035877 + F 88 -9.4 -4.39571 | opp_overlap 1035842 1035845, overlap 1035845 1035849 CCATATGTGATATAC CAGTCAGCTTAGCTAA TTG TTAGCTAAGCTTGCTA TTTTAAATTTCTAAA TERM 815 1035875 - 1035845 - f 78 -9.8 -2.69977 | opp_overlap 1035843 1035845 1035849, overlap 1035842 ATATGTGATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 816 1035845 - 1035875 + F 95 -12 -3.79633 | opp_overlap 1035845 1035842, overlap 1035843 1035849 ATATGTGATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 817 1035849 - 1035871 + F 100 -13.6 -3.55453 | opp_overlap 1035845 1035842, overlap 1035845 1035843 GTGATATACCAGTCA GCTTAGCTAA TTG TTAGCTAAGC TTGCTATTTTAAATT OTT_0987 1035929 - 1036210 + | hypothetical protein OTT_0988 1036252 - 1036725 + | hypothetical protein OTT_0989 1036748 - 1037686 + | hypothetical protein OTT_0990 1037705 - 1038199 + | hypothetical protein OTT_0991 1038229 - 1038633 + | RelA/SpoT-related protein OTT_0992 1038673 - 1038828 + | RelA/SpoT-related protein OTT_0993 1038949 - 1039947 + | hypothetical protein OTT_0994 1040470 - 1040015 - | putative conjugative transfer protein TraD OTT_0995 1040766 - 1040867 + | putative conjugative transfer protein TraA TERM 818 1043191 - 1043161 - g 82 -7.7 -4.61162 | overlap 1043182 1043185 ACATCAAAGAACAAA GACAGTATGATTA TGATG TAACCATTCTGTC AGCAGAAGGAAAAAC OTT_0996 1040922 - 1043582 + | putative conjugative transfer protein TraA TERM 819 1043658 - 1043638 - f 74 -6.2 -4.55491 | GAGCGAATTACAAAA TGAGCTAT ACATA ACAGCTCA CAGTGATGCTTGCAA OTT_0997 1043913 - 1044983 + | putative conjugative transfer protein TraI TERM 820 1045386 - 1045360 - g 79 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTACAACGGCA TERM 821 1045617 - 1045567 - g 100 -13.3 -4.84262 | opp_overlap 1045567 1045571 1045574 1045577, overlap 1045571 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 822 1045567 - 1045617 + G 100 -13.3 -2.84098 | opp_overlap 1045567 1045571, overlap 1045571 1045574 1045577 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA OTT_0998 1045035 - 1045595 + | putative transposase TERM 823 1045571 - 1045613 + T 80 -8.3 -4.10331 | opp_overlap 1045571 1045567, overlap 1045567 1045574 1045577 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 824 1045613 - 1045571 - T 91 -8.3 -4.91657 | opp_overlap 1045567 1045571 1045574 1045577, overlap 1045567 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_0999 1046573 - 1045611 - | transposase TERM 825 1045973 - 1045948 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 1045948 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 826 1046119 - 1046135 + g 73 -8.1 -3.54574 | overlap 1046116 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG TERM 827 1047072 - 1047100 + H 74 -9.1 -2.91728 | opp_overlap 1047073 1047075, overlap 1047075 GCTATATAGCTCAAG ATATGTATCTTAT TTT ATAAGATACATAA TATACTATTGACAAT TERM 828 1047099 - 1047073 - H 100 -12.6 -3.08934 | opp_overlap 1047072 1047075, overlap 1047075 CTATATAGCTCAAGA TATGTATCTTAT TTT ATAAGATACATA ATATACTATTGACAA TERM 829 1047075 - 1047097 + H 84 -10.8 -2.70232 | opp_overlap 1047073 1047075, overlap 1047072 ATATAGCTCAAGATA TGTATCTTAT TTT ATAAGATACA TAATATACTATTGAC TERM 830 1047097 - 1047075 - H 88 -10.8 -3.10053 | opp_overlap 1047075 1047072, overlap 1047073 ATATAGCTCAAGATA TGTATCTTAT TTT ATAAGATACA TAATATACTATTGAC OTT_1000 1047155 - 1047742 + | hypothetical protein gpsA 1048987 - 1047995 - | glycerol-3-phosphate dehydrogenase TERM 831 1048609 - 1048627 + g 80 -7.6 -4.28548 | opp_overlap 1048608 1048604 CTATGATGAATAAAG GATTATTT GCT AAATAATC TTTTACTACGTCACT OTT_1002 1050321 - 1049050 - | hypothetical protein TERM 832 1049460 - 1049487 + g 70 -7.2 -3.74025 | gap 1, overlap 1049458 1049455 1049472 ATGATGCATCTGGAA GAATTTTGC-GCA TTT TGTTGCAAAATTC TATTATTTGTTCTCT OTT_1003 1050531 - 1050842 + | transposase TERM 833 1052038 - 1052026 - g 74 -6.3 -4.45115 | overlap 1052023 1052028 ATTAATAGAAAACAA TCCTA CTC TAGGA ATAGAGCAGCATAAA OTT_1004 1051595 - 1052170 + | putative integrase OTT_1005 1052195 - 1052641 + | putative integrase OTT_1006 1052779 - 1053102 + | hypothetical protein OTT_1007 1053102 - 1053494 + | putative conjugative transfer protein TraE OTT_1008 1053905 - 1054135 + | hypothetical protein OTT_1009 1054211 - 1054369 + | putative conjugative transfer protein TraB OTT_1010 1054901 - 1054668 - | putative conjugative transfer protein TraI OTT_1011 1055832 - 1055260 - | repeat-containing protein E_01 OTT_1012 1056766 - 1055969 - | putative conjugative transfer protein TraA OTT_1013 1057455 - 1056781 - | putative conjugative transfer protein TraA OTT_1014 1058797 - 1057463 - | putative conjugative transfer protein TraA OTT_1015 1059104 - 1060426 + | hypothetical protein TERM 834 1060544 - 1060516 - f 82 -5.3 -5.52384 | TCTTCAGCAAAAAAA GGCTAAGCTAATC ATG GATGAGGTTAACC TTAAAATTAAAGAAC OTT_1016 1060588 - 1060926 + | putative conjugative transfer protein TraD secA2 1061202 - 1061738 + | preprotein translocase SecA subunit-like protein TERM 835 1062741 - 1062727 - g 72 -7.2 -3.80733 | GGCATGGTAGAATAA CAAGTA GCA TACTTG ATGAAGCTGAAAAAG TERM 836 1062999 - 1063009 + G 70 -4 -5.08824 | AATGGTGGTTTACAT GTAA TAG TTAC TTTTTTGCCTGAAAA secA2 1061976 - 1063418 + | preprotein translocase SecA subunit-like protein TERM 837 1063802 - 1063788 - f 81 -7.2 -4.7153 | AAAGAATTGCAAAAA TACTGT TTA ACAGTA GACACAAGCTTAAAA OTT_1019 1063942 - 1065198 + | ankyrin repeat-containing protein 14 TERM 838 1065257 - 1065228 - f 85 -10.1 -3.33492 | gap 1, opp_overlap 1065237 TTATTTAGTGTATAA GAGATGTAAGCGCT CAT AGCGCTT-CTTCTC ACAAATATGTGGCAC TERM 839 1065237 - 1065249 + F 82 -9.1 -3.7941 | opp_overlap 1065228 GTATAAGAGATGTAA GCGCT CAT AGCGC TTCTTCTCACAAATA TERM 840 1065974 - 1065960 - g 72 -7.2 -3.9504 | AAGTTTAATAAAATA TGACTT TCT AAGTCA GGTAGATGGAAGAGC TERM 841 1066112 - 1066092 - g 74 -5.5 -4.76311 | opp_overlap 1066091 TATAAAGAAAAAGAA TCCTGATTT TGA AAATCATGA CTATTACGTATTACA TERM 842 1066221 - 1066209 - g 76 -3.5 -5.37043 | opp_overlap 1066202 ATGGGATATAAAAAA TTTAA TCT TTAAA GAAAACTGTATGGGA OTT_1020 1065754 - 1066380 + | hypothetical protein OTT_1021 1066533 - 1067060 + | hypothetical protein OTT_1022 1067641 - 1067066 - | RelA/SpoT-related protein TERM 843 1067129 - 1067157 + g 77 -7.5 -4.04752 | opp_overlap 1067129 TGGTAGATTAAGGTA CTTAGCAAGAGGT ATA AATTCTTGCTGAG TTTCTAGTATGATTT OTT_1023 1068500 - 1067742 - | hypothetical protein TERM 844 1067899 - 1067909 + g 71 -5.4 -4.62984 | opp_overlap 1067899 1067897 ACCAACTCAAAATCA GCTA ATT TAGC TTTTATATCTCCTAA OTT_1024 1069350 - 1068604 - | hypothetical protein TERM 845 1069643 - 1069633 - H 73 -3.2 -5.43414 | AGGATACATAAAAAA GCCT TGT AAGC GTTATTATTACTGGC OTT_1025 1069725 - 1070114 + | N6 adenine-specific DNA-methyltransferase OTT_1026 1070149 - 1070523 + | transposase OTT_1027 1070510 - 1070644 + | transposase OTT_1028 1070701 - 1071075 + | transposase OTT_1029 1071062 - 1071568 + | transposase OTT_1030 1071590 - 1072054 + | N6 adenine-specific DNA-methyltransferase OTT_1031 1072561 - 1072058 - | hypothetical protein OTT_1032 1073159 - 1072659 - | ankyrin repeat-containing protein 03_07 TERM 846 1073198 - 1073161 - R 84 -9.5 -3.63627 | gap 1, opp_overlap 1073167, overlap 1073162 1073167 TTCTTATATTTCAAA GCAAAATATAAAG-CTGT AGT ACAGTCTTTATATTTTGA ATTGACAAGTGTACT TERM 847 1073197 - 1073162 - R 100 -13 -2.77962 | gap 1, opp_overlap 1073167, overlap 1073161 1073167 TCTTATATTTCAAAG CAAAATATAAAG-CTGT AGT ACAGTCTTTATATTTTG AATTGACAAGTGTAC TERM 848 1073167 - 1073192 + r 76 -7.1 -4.27316 | gap 1, opp_overlap 1073167 1073162 1073161 TATTTCAAAGCAAAA TATAAAG-CTGT AGT ACAGTCTTTATA TTTTGAATTGACAAG TERM 849 1073192 - 1073167 - R 78 -7.1 -4.55798 | gap 1, opp_overlap 1073167, overlap 1073162 1073161 TATTTCAAAGCAAAA TATAAAG-CTGT AGT ACAGTCTTTATA TTTTGAATTGACAAG OTT_1033 1074969 - 1073521 - | replicative DNA helicase TERM 850 1073767 - 1073797 + g 70 -4.1 -4.98522 | gap 1, opp_overlap 1073767 ATCTTGTTCAATGGA GCCTGATTCTCGTA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT TERM 851 1073862 - 1073877 + g 80 -7.6 -4.1721 | opp_overlap 1073874 TTATTGAAATATTGA GCTCTT TAGC AAGAGC TTTTAAGCTCTGAGT OTT_1034 1075322 - 1074978 - | hypothetical protein OTT_1035 1076536 - 1075388 - | hypothetical protein TERM 852 1075761 - 1075775 + g 74 -8.6 -3.3375 | overlap 1075759 1075774 CTATCAGACTTGTGT TGCAGT GCA ACTGCA TCTTCTGGTGTTAGT TERM 853 1075914 - 1075940 + g 76 -5.4 -4.96523 | opp_overlap 1075914 1075926, overlap 1075927 GAAATCTGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 854 1075994 - 1076008 + g 84 -3.6 -5.77988 | CTCACCTTCAGTAGA TCTAGA TAT TTTAGA TTTTTTTATATATCT TERM 855 1076062 - 1076043 - G 75 -5 -5.00884 | opp_overlap 1076044, overlap 1076044 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCAGGTTGGG TERM 856 1076044 - 1076061 + g 88 -8.5 -4.46233 | opp_overlap 1076044 1076043 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 857 1076061 - 1076044 - G 77 -8.5 -3.60048 | opp_overlap 1076044, overlap 1076043 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 858 1076133 - 1076151 + g 70 -4.6 -4.82901 | overlap 1076135 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA OTT_1036 1076744 - 1076899 + | transposase TERM 859 1077019 - 1077003 - T 70 -5.2 -4.5787 | GTACTAAAAAAAACA TATGCT TTTAG AGCATA CTAGACACCGTTCTC TERM 860 1077737 - 1077755 + T 78 -9 -3.21099 | opp_overlap 1077734 ATTTTAGGCAAATTT TGTTAGTA CTA TACTAACA TTAGTGCTGCCAAAG fabF 1078996 - 1077725 - | 3-oxoacyl-[acyl carrier protein] synthase II TERM 861 1079063 - 1079080 + r 76 -4.3 -5.27476 | opp_overlap 1079063, overlap 1079054 1079071 AGATGTTTAAAATAA TTTAATT TTAA AATTAAA TTTTATTTTGTTAAA acpP 1079469 - 1079083 - | acyl carrier protein fabG 1080317 - 1079592 - | 3-oxoacyl reductase recA 1081381 - 1080311 - | RecA protein OTT_1041 1082278 - 1081478 - | tRNA/rRNA methyltransferase, TrmH family TERM 862 1082285 - 1082259 - G 77 -8.2 -3.80573 | opp_overlap 1082251 1082259 1082262, overlap 1082248 1082262 TTGACGATTATTAAA TAATCACTTGAC AGA ATCAAGTAATTA TTATAGAAAGTACTA tuf 1082670 - 1083854 + | elongation factor EF-Tu rpsJ 1083897 - 1084202 + | 30S ribosomal protein S10 rplC 1084186 - 1084869 + | 50S ribosomal protein L3 rplD 1084884 - 1085516 + | 50S ribosomal protein L4 TERM 863 1085766 - 1085750 - g 90 -5.1 -5.71712 | TGTGATAGAAAAAAA GCTATAG TTA CTGTAGC AAAAGATCAGGTGAT rplW 1085513 - 1085809 + | 50S ribosomal protein L23 TERM 864 1086262 - 1086276 + G 71 -7.8 -3.4072 | overlap 1086263 TAAACCAGGCAAGGG TGGGCA AGT TGCCCG TTCTGCTGGAACATA TERM 865 1086263 - 1086275 + G 72 -9.1 -2.64218 | overlap 1086262 AAACCAGGCAAGGGT GGGCA AGT TGCCC GTTCTGCTGGAACAT rplB 1085810 - 1086631 + | 50S ribosomal protein L2 rpsS 1086655 - 1086933 + | 30S ribosomal protein S19 rplV 1086935 - 1087285 + | 50S ribosomal protein L22 rpsC 1087301 - 1087960 + | 30S ribosomal protein S3 rplP 1087989 - 1088399 + | 50S ribosomal protein L16 rpmC 1088392 - 1088613 + | 50S ribosomal protein L29 rpsQ 1088614 - 1088853 + | 30S ribosomal protein S17 rplN 1088942 - 1089310 + | 50S ribosomal protein L14 rplX 1089312 - 1089629 + | 50S ribosomal protein L24 rplE 1089654 - 1090223 + | 50S ribosomal protein L5 TERM 866 1090419 - 1090403 - g 70 -8.1 -3.06133 | CAAGCTTCCACGTAA TTCTAGT AGT ACTAGAA TTAGAAATAGGTGTG rpsN 1090242 - 1090547 + | 30S ribosomal protein S14 rpsH 1090570 - 1090971 + | 30S ribosomal protein S8 rplF 1090999 - 1091532 + | 50S ribosomal protein L6 rplR 1091546 - 1091920 + | 50S ribosomal protein L18 rpsE 1091941 - 1092462 + | 30S ribosomal protein S5 OTT_1062 1092462 - 1092596 + | hypothetical protein TERM 867 1092929 - 1092907 - g 90 -8 -4.90302 | opp_overlap 1092906 1092910 1092913 CATGAATAAAAGAAA TTATAATATT ATT AATATTATAA CAATTTTACGTTTAG rplO 1092695 - 1093186 + | 50S ribosomal protein L15 TERM 868 1093666 - 1093677 + G 77 -3 -5.58454 | CTGTTGTAACTTTAG TTGT AGGT ACAA TTTTTTTAATGTGGA secY 1093188 - 1094495 + | preprotein translocase SecY subunit adk 1094492 - 1095136 + | adenylate kinase rpsM 1095216 - 1095593 + | 30S ribosomal protein S13 rpsK 1095603 - 1095983 + | 30S ribosomal protein S11 rpoA 1096032 - 1097060 + | DNA-directed RNA polymerase alpha chain rplQ 1097079 - 1097516 + | 50S ribosomal protein L17 rpsT 1097598 - 1097870 + | 30S ribosomal protein S20 TERM 869 1097861 - 1097888 + F 74 -8 -3.57908 | opp_overlap 1097861 1097866, overlap 1097866 TAAACAGCTTGAAGA TAAAATATAATC AGAA GATTATATTTTG TTCTGGTGTTTAATG TERM 870 1097883 - 1097866 - f 75 -5.7 -4.66938 | opp_overlap 1097861 1097866, overlap 1097861 AGCTTGAAGATAAAA TATAATC AGAA GATTATA TTTTGTTCTGGTGTT TERM 871 1097866 - 1097883 + F 78 -5.7 -4.83722 | opp_overlap 1097866 1097861, overlap 1097861 AGCTTGAAGATAAAA TATAATC AGAA GATTATA TTTTGTTCTGGTGTT TERM 872 1098318 - 1098330 + G 77 -7.7 -4.09509 | TGTAAATGAATTAGC TGAGC ATT GCTCA TTTGTATCAGTTGGT ptrB 1097935 - 1099995 + | protease II OTT_1072 1100020 - 1101231 + | 5-aminolevulinic acid synthase TERM 873 1101227 - 1101237 + T 73 -3.2 -5.4182 | TATCTGCAGCATTGG GCTA ATA TGGC TTTTTATTTATAATT perM 1102293 - 1101241 - | permease protein PerM TERM 874 1102426 - 1102458 + H 80 -6.5 -4.84363 | opp_overlap 1102421 1102425 1102430 1102434, overlap 1102421 1102430 1102442 ATTAATAAAATTAAT GGAATTAATCTTGAT ACT ATCAAGATTAATTGA TTTTTGATAGTTTAA TERM 875 1102454 - 1102430 - H 95 -11.7 -3.29386 | opp_overlap 1102421 1102426 1102430 1102442, overlap 1102421 1102425 1102434 ATAAAATTAATGGAA TTAATCTTGAT ACT ATCAAGATTAA TTGATTTTTGATAGT TERM 876 1102430 - 1102454 + H 95 -11.7 -3.85504 | opp_overlap 1102421 1102430 1102425 1102434, overlap 1102421 1102426 1102442 ATAAAATTAATGGAA TTAATCTTGAT ACT ATCAAGATTAA TTGATTTTTGATAGT TERM 877 1102450 - 1102434 - H 73 -8.1 -3.41636 | opp_overlap 1102430 1102426 1102442, overlap 1102430 1102425 AATTAATGGAATTAA TCTTGAT ACT ATCAAGA TTAATTGATTTTTGA pgpA 1102587 - 1103183 + | phosphatidylglycerophosphatase A cinA 1103243 - 1103743 + | competence-damaged protein CinA thyA 1103791 - 1104693 + | Thy1 protein TERM 878 1105463 - 1105451 - f 70 -6.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGTTA GGGG AGTGAAATAGATCTG TERM 879 1106087 - 1106074 - f 70 -5.3 -4.60746 | opp_overlap 1106084 1106086, overlap 1106084 GTAAAAAGACCAAAA CAACT AGGA AGTTG GCTTAGAAGCAGCCA virB8 1108251 - 1108952 + | type IV secretion system protein VirB8 trbG 1108942 - 1109703 + | conjugal transfer protein TrbG precursor TERM 880 1109825 - 1109843 + T 86 -9 -4.07568 | TATCGCGTTTTAGAG TGCTTTTT TTA AAAAAGCA TTTTGCACACACAAA OTT_1079 1110348 - 1109959 - | hypothetical protein ftsY 1110451 - 1111398 + | signal recognition particle receptor FtsY TERM 881 1113197 - 1113213 + F 74 -6.7 -4.38927 | TATTATTACTGTCTA TTGTTAT TTT ATAACAA TTTATTGTATCACAA TERM 882 1113240 - 1113267 + F 91 -10.2 -4.15841 | opp_overlap 1113246, overlap 1113243 ACAAATAAATCATTG TAATAACTTATT TTAA AATAAGTTATTA TTTCTCCTTTACTCA TERM 883 1113243 - 1113264 + F 77 -7.5 -4.1851 | opp_overlap 1113246, overlap 1113240 AATAAATCATTGTAA TAACTTATT TTAA AATAAGTTA TTATTTCTCCTTTAC OTT_1081 1114352 - 1114855 + | hypothetical protein tlyC 1114868 - 1115782 + | hemolysin C ubiX 1116395 - 1115832 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OTT_1084 1116879 - 1118348 + | putative response regulator protein apaG 1119132 - 1118707 - | ApaG protein OTT_1086 1120371 - 1120703 + | putative conjugative transfer protein TraA OTT_1087 1120717 - 1121472 + | putative conjugative transfer protein TraA OTT_1089 1122263 - 1122006 - | ankyrin repeat-containing protein 10_03 OTT_1088 1121691 - 1122068 + | putative conjugative transfer protein TraA OTT_1090 1122703 - 1122302 - | ankyrin repeat-containing protein 10_04 OTT_1091 1122738 - 1122914 + | hypothetical protein TERM 884 1122935 - 1122902 - T 73 -5.5 -4.67173 | opp_overlap 1122903, overlap 1122904 TAATGTAAAAAATAA CATGGATTATTAACT TTTA AATTAATAATCCACT AACTTAAGTTTTTTG TERM 885 1122933 - 1122904 - T 91 -10.3 -3.92369 | opp_overlap 1122903, overlap 1122902 ATGTAAAAAATAACA TGGATTATTAACT TTTA AATTAATAATCCA CTAACTTAAGTTTTT OTT_1092 1123909 - 1122923 - | putative conjugative transfer protein TraD OTT_1093 1124595 - 1124212 - | TPR repeat-containing protein 01_04 TERM 886 1124442 - 1124452 + g 81 -4 -5.61689 | GTTTGTACTTAATAG CTAT ATC ATAG TTTTTTATTGCTTTT OTT_1094 1124897 - 1124589 - | TPR repeat-containing protein 01_05 OTT_1095 1125156 - 1125046 - | TPR repeat-containing protein 01_06 TERM 887 1125225 - 1125203 - R 71 -4.2 -5.03314 | opp_overlap 1125208, overlap 1125208 TTTAGCCTTAAAAAA GAACTTTCAA TAT TTGAATATTC TTTAGCTAAAACATT OTT_1096 1125898 - 1125575 - | hypothetical protein TERM 888 1126453 - 1126481 + r 100 -12.7 -4.25658 | opp_overlap 1126458, overlap 1126449 TTGAGTTATACTATT TACAACATATGCT TCA AGTATATGTTGTA TTGTTTTCATGGGGT TERM 889 1126543 - 1126553 + r 70 -6.8 -3.97108 | TCTTGTTGTATTATG GCTG GCA CAGC TTGTATTTTAAACTT ispB 1128073 - 1127057 - | octaprenyl-diphosphate synthase TERM 890 1127082 - 1127102 + g 74 -4.1 -5.1523 | opp_overlap 1127082, overlap 1127086 CTATTAATAATATAT TTAGTTAGA TTT TCTAAGTAA TTTTTATATTCTAAA OTT_1098 1129907 - 1128093 - | hypothetical protein TERM 891 1128579 - 1128553 - G 71 -8.2 -3.27992 | overlap 1128552 AAGTCAATAATAAAG TCTACTAAATCT CTA AAATTTAGCAGA TAAAAATTAGTTACA tlc3 1131451 - 1129907 - | ADP,ATP carrier protein homolog TERM 892 1131383 - 1131397 + g 70 -7.2 -3.66784 | opp_overlap 1131383 1131382 CATTGGCATAAATAG CTTCAT TTC ATGAAG TTCTATTGGCCATAG tlc4 1133136 - 1131604 - | ADP,ATP carrier protein homolog OTT_1101 1133966 - 1133652 - | transposase OTT_1102 1134313 - 1133915 - | transposase OTT_1103 1134792 - 1134631 - | putative conjugative transfer protein TraD OTT_1104 1134977 - 1135168 + | transposase TERM 893 1135354 - 1135340 - g 71 -2.9 -5.23765 | GAAATAAGAGAAAAA TATCA ACAAG TGATA AGTTCTATACTCAAG OTT_1105 1135310 - 1135576 + | transposase OTT_1106 1135577 - 1135783 + | transposase TERM 894 1136805 - 1136771 - T 73 -8 -3.34344 | overlap 1136772 TTACTTGCTAACCAA GGGTTAGAGCTAATTT TAA AAATCAGCTCTAACAT GAAAGAAAAAGTAAT TERM 895 1136804 - 1136772 - T 87 -11.5 -2.60392 | overlap 1136771 TACTTGCTAACCAAG GGTTAGAGCTAATTT TAA AAATCAGCTCTAACA TGAAAGAAAAAGTAA aprE 1138409 - 1136871 - | alkaline protease secretion protein AprE aprD 1140201 - 1138447 - | alkaline protease secretion ATP-binding protein AprD TERM 896 1140630 - 1140609 - H 70 -5.3 -4.49314 | opp_overlap 1140609 1140610 1140622 1140627, overlap 1140610 CATTAGGAAAAACAA CTTCTAATA CTGT TATTAGAAA TATATTTCATTTTGC TERM 897 1141135 - 1141151 + H 84 -5.9 -5.29885 | TAAAAGTTATTAGGT CAGTTAT TCT ATGACTG TTTTCTTTTTGCATT TERM 898 1141574 - 1141600 + H 77 -7.6 -4.10188 | opp_overlap 1141589, overlap 1141575 ATATTATGAAGTTGT TTTAATTTTTAA AAA TTAAAAATTAAG TTTGCTATTTTAATT TERM 899 1141575 - 1141599 + H 76 -8.9 -3.04486 | opp_overlap 1141589, overlap 1141574 TATTATGAAGTTGTT TTAATTTTTAA AAA TTAAAAATTAA GTTTGCTATTTTAAT TERM 900 1141716 - 1141730 + G 79 -5 -5.20534 | TTTCAAGGATTTCAG GTTTTC TGC GAGAAC TTTTTATTGCTTCAT TERM 901 1142386 - 1142405 + G 71 -8 -3.21626 | opp_overlap 1142389, overlap 1142389 AGCATCGCAAATTAG TAATCTGA TTTC TCAGATTA TATCTAGTTTTTTTT mviN 1141655 - 1143169 + | virulence factor MviN OTT_1110 1143586 - 1143206 - | hypothetical protein TERM 902 1144823 - 1144784 - R 78 -9.6 -2.96695 | opp_overlap 1144792, overlap 1144781 1144792 TGTCTGATTAAACTA TGGTATAATAGACTTCTT TCAA AACAAGTCTATTATACTA GCTAGAAAACTTATC TERM 903 1144864 - 1144888 + r 75 -5.2 -4.9725 | gap 1, opp_overlap 1144864 AAAGAAAGTCGAAAA TTAGCTTG-AT GTAT ATACAAGCTAA TTTTTCTATCAAACT OTT_1111 1146158 - 1144965 - | hypothetical protein OTT_1112 1147071 - 1146364 - | ankyrin repeat-containing protein 03_08 OTT_1113 1147504 - 1147109 - | RelA/SpoT-related protein OTT_1114 1148045 - 1147914 - | replicative DNA helicase TERM 904 1148788 - 1148768 - g 95 -9.1 -5.08011 | AAAACTTCTAAAAAA TTTTCAGCG TTT CACTGAAAA AGAAACAAAAGGAGA TERM 905 1148873 - 1148830 - g 79 -4.9 -5.16572 | opp_overlap 1148861, overlap 1148854 ATCTAACCCAAAAAA TTTTTC-GCTCCAACCTGAAA GAAA TTTCAGG-TGAACCTGAAAAA AGTTTCAGGTACATA TERM 906 1148871 - 1148854 - g 88 -8.5 -4.46233 | opp_overlap 1148861, overlap 1148830 CCAACCTGAAAGAAA TTTCAGG TGAA CCTGAAA AAAGTTTCAGGTACA TERM 907 1148861 - 1148886 + G 73 -9.1 -2.93858 | opp_overlap 1148854 1148830 GAAAGAAATTTCAGG TGAACCTGAAA AAAG TTTCAGGTACA TATATAGATATAATA TERM 908 1149259 - 1149245 - g 74 -8.6 -3.25459 | opp_overlap 1149242 1149238, overlap 1149243 ACTAACGCCAGAAGA TGCAGT TAT ACTGCA ACGTATGTCTAGTAG OTT_1115 1148553 - 1150082 + | hypothetical protein OTT_1116 1150091 - 1151527 + | replicative DNA helicase OTT_1117 1151941 - 1152336 + | RelA/SpoT-related protein OTT_1118 1152471 - 1153019 + | ankyrin repeat-containing protein 03_09 OTT_1119 1153066 - 1153614 + | hypothetical protein OTT_1120 1154427 - 1153618 - | N6 adenine-specific DNA-methyltransferase TERM 909 1154851 - 1154831 - g 84 -5.6 -5.40873 | AACAGAAAAATAAAA GTATATTT AATAA AAATATAC AGTCAAAACTGTTAC OTT_1121 1154794 - 1155072 + | hypothetical protein TERM 910 1155053 - 1155082 + F 71 -7.3 -3.79633 | gap 1, opp_overlap 1155049 1155053 1155056, overlap 1155051 1155056 TATGTCATATACCAA TC-AGCTTAGCTAA CTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 911 1155078 - 1155056 - f 100 -13.6 -2.83345 | opp_overlap 1155056 1155053 1155051, overlap 1155049 1155053 GTCATATACCAATCA GCTTAGCTAA CTG TTAGCTAAGC TTGCTATTTTAAATT TERM 912 1155056 - 1155078 + F 100 -13.6 -3.55453 | opp_overlap 1155049 1155053 1155056, overlap 1155053 1155051 GTCATATACCAATCA GCTTAGCTAA CTG TTAGCTAAGC TTGCTATTTTAAATT TERM 913 1155122 - 1155108 - f 70 -2.9 -5.20328 | TTCTAAAAAAACAAA GTTAA TAAAC TTAAC CATAGGAGAATAATA OTT_1122 1155137 - 1155838 + | hypothetical protein TERM 914 1155881 - 1155915 + F 88 -9.4 -4.39571 | opp_overlap 1155880 1155883, overlap 1155883 1155887 CCATATGTGATATAC CAGTCAGCTTAGCTAA TTG TTAGCTAAGCTTGCTA TTTTAAATTTCTAAA TERM 915 1155913 - 1155883 - f 78 -9.8 -2.69977 | opp_overlap 1155883 1155881 1155887, overlap 1155880 ATATGTGATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 916 1155883 - 1155913 + F 95 -12 -3.79633 | opp_overlap 1155880 1155883, overlap 1155881 1155887 ATATGTGATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 917 1155887 - 1155909 + F 100 -13.6 -3.55453 | opp_overlap 1155883 1155880, overlap 1155883 1155881 GTGATATACCAGTCA GCTTAGCTAA TTG TTAGCTAAGC TTGCTATTTTAAATT OTT_1123 1155967 - 1156248 + | hypothetical protein OTT_1124 1156290 - 1156763 + | hypothetical protein OTT_1125 1156786 - 1157724 + | hypothetical protein OTT_1126 1157743 - 1158237 + | hypothetical protein OTT_1127 1158279 - 1158866 + | RelA/SpoT-related protein TERM 918 1158859 - 1158888 + F 74 -8.7 -3.30214 | opp_overlap 1158867 ACTGTGAGCTTTATG CTACCTAATAAAC TAAA GTTTAATAGGTGG TTAATGTAGTGAATT OTT_1128 1159093 - 1159950 + | hypothetical protein OTT_1129 1160293 - 1160117 - | putative conjugative transfer protein TraD OTT_1130 1160637 - 1161029 + | hypothetical protein OTT_1131 1161260 - 1161559 + | hypothetical protein OTT_1132 1162073 - 1161618 - | putative conjugative transfer protein TraD TERM 919 1162001 - 1162029 + g 91 -5.3 -5.7946 | GTTCTTTTATTTTAA GGTTAACCTCATC CAT GATTAGTTTAGCC TTTTTTTGTTGGAGA OTT_1133 1162368 - 1162766 + | putative conjugative transfer protein TraA OTT_1134 1162791 - 1165196 + | putative conjugative transfer protein TraA TERM 920 1165429 - 1165403 - f 86 -9.6 -3.83756 | AAATTATAATTCAAA CGGTAAAAATAT CAA ATATTTATACCG CAAAACAATTTAGTG TERM 921 1166196 - 1166166 - g 72 -3.4 -5.31456 | gap 1, overlap 1166155 1166187 GCAAGCTACAAAAAA TGTTGCTAACCTG ATAGAG CAGCTTAGCA-CA GCTAAGGCAAACTCT OTT_1135 1165465 - 1168137 + | putative conjugative transfer protein TraI TERM 922 1168465 - 1168479 + G 79 -8.6 -3.79906 | opp_overlap 1168464 1168465 1168474 AGCGTAAAAAAGAAC GTGGTA AAT TACCAC TTGTTGTACCAATAG TERM 923 1168479 - 1168465 - g 74 -8.6 -3.36769 | opp_overlap 1168465, overlap 1168464 1168474 AGCGTAAAAAAGAAC GTGGTA AAT TACCAC TTGTTGTACCAATAG TERM 924 1168651 - 1168641 - g 74 -3.2 -5.48028 | GAAATAAAAAGAAAA GCAA CTG CTGC ACTAGTTCATTTTAT OTT_1136 1168122 - 1169114 + | putative transposase TERM 925 1169136 - 1169102 - T 79 -6.7 -4.67173 | opp_overlap 1169103 1169108, overlap 1169099 1169104 TAATTTAAAAAATAA CATAGAGTATTAATT TTTCG AATTAATACTCTACT AACTTAAGTTTTTTG TERM 926 1169103 - 1169135 + T 70 -8.7 -2.61943 | opp_overlap 1169102 1169099 1169104, overlap 1169108 AATTTAAAAAATAAC ATAGAGTATTAATTT TTC GAATTAATACTCTAC TAACTTAAGTTTTTT TERM 927 1169134 - 1169104 - T 95 -11.5 -3.92369 | opp_overlap 1169103 1169108, overlap 1169102 1169099 ATTTAAAAAATAACA TAGAGTATTAATT TTTCG AATTAATACTCTA CTAACTTAAGTTTTT OTT_1137 1170878 - 1169124 - | putative conjugative transfer protein TraD TERM 928 1170327 - 1170350 + g 73 -8.2 -3.38674 | overlap 1170326 CTTTACTAATGGCAA GCCTCCAAAA CAGA TTTTCGAGGC CTTTTTAGCGCTTTT OTT_1138 1172029 - 1170884 - | TPR repeat-containing protein 01_07 OTT_1139 1174396 - 1172045 - | putative conjugative transfer protein TraG TERM 929 1172835 - 1172850 + g 74 -6.2 -4.3586 | opp_overlap 1172823 1172820, overlap 1172832 CCAGCTCCAGCACTA GTACTA GTAC TAGTAC TTTTACTGTAGCTAC TERM 930 1173586 - 1173531 - G 76 -8.6 -3.49653 | gap 1, opp_overlap 1173531, overlap 1173548 ATCATTCCTAGACAA TGGATTATTGTAAAAAATACTGGCCAG CTG CTGACCCATATTATTAACAA-AATCCA TGTTTTGAGTATGTT TERM 931 1173570 - 1173548 - G 75 -4.8 -5.06451 | opp_overlap 1173531, overlap 1173531 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAACAAAATCC TERM 932 1174379 - 1174368 - G 72 -5.8 -4.41422 | TTAGATACAAAATAA CTCG TTTG CGAG GAAAGAGAAGCAAAC TERM 933 1174485 - 1174435 - R 100 -13.3 -4.84262 | opp_overlap 1174435 1174439 1174442 1174445, overlap 1174439 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 934 1174435 - 1174485 + r 100 -13.3 -2.84098 | opp_overlap 1174435 1174439, overlap 1174439 1174442 1174445 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 935 1174481 - 1174439 - R 91 -8.3 -4.91657 | opp_overlap 1174435 1174439 1174442 1174445, overlap 1174435 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 936 1174439 - 1174481 + r 80 -8.3 -4.10331 | opp_overlap 1174439 1174435, overlap 1174435 1174442 1174445 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_1140 1175441 - 1174479 - | transposase TERM 937 1174841 - 1174816 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 1174816 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 938 1174987 - 1175003 + g 73 -8.1 -3.54574 | overlap 1174984 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_1141 1175953 - 1175618 - | putative conjugative transfer protein TraG OTT_1142 1176432 - 1175953 - | putative conjugative transfer protein TraH OTT_1143 1177256 - 1176627 - | putative conjugative transfer protein TraH OTT_1144 1177951 - 1177253 - | putative conjugative transfer protein TraF OTT_1145 1178583 - 1177948 - | putative conjugative transfer protein TraN OTT_1146 1179639 - 1178872 - | putative conjugative transfer protein TraN OTT_1147 1179956 - 1179636 - | putative conjugative transfer protein TrbC OTT_1148 1180628 - 1180041 - | putative conjugative transfer protein TraU OTT_1150 1183563 - 1181692 - | putative conjugative transfer protein TraC OTT_1149 1180783 - 1181793 + | ankyrin repeat-containing protein 06_02 OTT_1151 1183804 - 1183475 - | hypothetical protein OTT_1152 1184073 - 1183804 - | putative conjugative transfer protein TraB OTT_1153 1184275 - 1184036 - | putative conjugative transfer protein TraB OTT_1154 1184479 - 1184375 - | hypothetical protein OTT_1155 1184781 - 1184479 - | hypothetical protein OTT_1156 1185104 - 1184778 - | putative conjugative transfer protein TraE OTT_1157 1185331 - 1185188 - | putative conjugative transfer protein TraE OTT_1158 1185480 - 1185331 - | hypothetical protein OTT_1159 1186460 - 1186152 - | putative integrase TERM 939 1187072 - 1187082 + H 74 -4 -5.34055 | TATTAAATAGTAGAC TGTA CAA TACA TTTTTTCATGTTTGT TERM 940 1187321 - 1187300 - H 80 -8.9 -3.53343 | opp_overlap 1187289 1187295 1187293 1187299 AATGCTTTTGTTAAA GGTTAATAT TTTG ATATTAACC ATAGTTCGATATAAT OTT_1160 1188175 - 1188354 + | hypothetical protein TERM 941 1189921 - 1189937 + G 79 -8.1 -4.09321 | opp_overlap 1189921 1189920 GATATACAAGATAAG CGTTTAT TAA ATAAACG TTCTTTAATTGAGTC OTT_1161 1189468 - 1190184 + | transposase yajC 1190717 - 1191097 + | preprotein translocase, YajC subunit TERM 942 1191157 - 1191170 + G 75 -2.4 -5.55664 | GCTATAGCACTTTGC TTCG TAGTAC CGAA TTTTTTTGATACTAC TERM 943 1192227 - 1192239 + G 76 -6.3 -4.69962 | CATTTTAGGATTATT TGCTA ATA TAGCA TTATTTTTTAGTCTG secD 1191094 - 1192656 + | protein-export membrane protein SecD OTT_1164 1194192 - 1193053 - | reverse transcriptase OTT_1165 1194176 - 1194616 + | hypothetical protein OTT_1166 1195063 - 1194947 - | transposase OTT_1167 1195269 - 1195376 + | transposase TERM 944 1195801 - 1195785 - g 71 -2.3 -5.38951 | overlap 1195792 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_1168 1195613 - 1196017 + | transposase OTT_1169 1196038 - 1196475 + | transposase TERM 945 1197290 - 1197302 + T 75 -3.4 -5.37593 | opp_overlap 1197290 AAACTTACTATATCA GCTT TTCGC AAGC TTTTTTGATTTGCAG aatA 1198484 - 1197282 - | aspartate aminotransferase OTT_1171 1198591 - 1199628 + | hypothetical protein vacJ 1199688 - 1200521 + | Vacj lipoprotein precursor OTT_1173 1200518 - 1201108 + | hypothetical protein hemN 1201136 - 1202338 + | oxygen-independent coproporphyrinogen III oxidase OTT_1175 1202379 - 1202891 + | hypothetical protein recO 1202951 - 1203676 + | DNA repair protein RecO OTT_1177 1204250 - 1204552 + | transposase TERM 946 1204676 - 1204660 - gT 71 -2.3 -5.38951 | overlap 1204667 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_1178 1204506 - 1204886 + | transposase OTT_1179 1205596 - 1205408 - | putative integrase OTT_1180 1205782 - 1205660 - | putative integrase OTT_1181 1205891 - 1205769 - | putative integrase TERM 947 1206273 - 1206288 + r 70 -4.8 -4.79657 | opp_overlap 1206273 CTATAAAGTGTAGAA GTTAAT AAAG ATTAAC TTTTCTTCATCTTGT OTT_1182 1206974 - 1206651 - | hypothetical protein radC 1207692 - 1207012 - | DNA repair protein RadC TERM 948 1207781 - 1207743 - H 100 -16.4 -3.65902 | opp_overlap 1207739 1207738 1207751 TCCATTGTATGGAAA TTTACATAGTGATCAATA ACT TAGTGATCACTATGTAAA TAAAATTCTTTTAAA rpsL 1207941 - 1208312 + | 30S ribosomal protein S12 rpsG 1208337 - 1208858 + | 30S ribosomal protein S7 TERM 949 1208988 - 1209014 + G 71 -8.8 -2.87132 | opp_overlap 1208988 TATAGCATAGGAGAA GTTCATGATGGT ACT ACTGTCATGGAC TATATGAAGCAAGAA TERM 950 1209851 - 1209881 + G 93 -9.9 -4.2008 | opp_overlap 1209857, overlap 1209848 ATTAGCTTTTAAGGT CATTAATGATCCT TTTGT AGGATCATTAACG TTTATTCGAATATAT TERM 951 1210423 - 1210397 - g 73 -4.5 -5.07275 | TTACACACATAAAAA GCAAACTGG AGGCGCTGG CCAATTTGC GCGTGTCAAGATTAT fusA 1208862 - 1210982 + | translation elongation factor G rpsA 1211233 - 1212708 + | 30S ribosomal protein S1 OTT_1188 1213884 - 1214057 + | transposase TERM 952 1214642 - 1214598 - T 72 -6 -4.52415 | gap 1, opp_overlap 1214600 1214608, overlap 1214600 1214601 ATTTAGAATAAGAAA CAGTT-AGAAAGAGGTCTAAT ATAC AATAGACATCTTTCTAAACTA GTTAAGGTAGTGCAA TERM 953 1214638 - 1214601 - T 80 -10.1 -2.90662 | opp_overlap 1214600 1214608, overlap 1214600 1214598 TAGAATAAGAAACAG TTAGAAAGAGGTCTAAT ATAC AATAGACATCTTTCTAA ACTAGTTAAGGTAGT TERM 954 1214853 - 1214869 + T 70 -2.3 -5.38951 | overlap 1214850 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTT_1189 1215195 - 1215031 - | transposase cspA 1216541 - 1216320 - | cold shock protein OTT_1191 1218259 - 1219125 + | hypothetical protein TERM 955 1220247 - 1220230 - g 76 -7.1 -4.20696 | GCAGCAATTTTAAAA TGCATTA AGAA TAATGCA GGCAATTATTGTGGA OTT_1192 1219828 - 1221678 + | hypothetical protein pkcI 1221915 - 1222286 + | protein kinase C inhibitor 1 asd 1222346 - 1223383 + | aspartate-semialdehyde dehydrogenase ctaB 1224462 - 1223524 - | cytochrome c oxidase assembly factor TERM 956 1223716 - 1223699 - G 72 -7.1 -3.8766 | GTAGAGCATATTAAA TATAGCA AGCC TGCTATA TCAGTAAAATAGGGT coxA 1226059 - 1224473 - | cytochrome c oxidase polypeptide I TERM 957 1225243 - 1225215 - G 74 -9.7 -2.78463 | opp_overlap 1225223 1225235, overlap 1225221 1225223 ATTGCCCCTACCATA CCTAAATAGCCAA ATA TTGGCTTTTTAGA AAAAGTTGATATAAC TERM 958 1225223 - 1225235 + g 82 -7.7 -4.57341 | opp_overlap 1225221 1225215 1225223 TACCATACCTAAATA GCCAA ATA TTGGC TTTTTAGAAAAAGTT TERM 959 1225235 - 1225223 - G 71 -7.7 -3.44487 | opp_overlap 1225223, overlap 1225221 1225215 TACCATACCTAAATA GCCAA ATA TTGGC TTTTTAGAAAAAGTT OTT_1197 1227673 - 1226252 - | hypothetical protein TERM 960 1226855 - 1226871 + g 71 -6.7 -4.09459 | overlap 1226858 AAAGTTGTATGTTCC TAATTCA TTT TGAATTA TTTGTAAATTTTTAA TERM 961 1226965 - 1226982 + g 70 -6.3 -4.323 | CATAGCTATATTCTT TATCAGC TATA GCTGGTA TTTTAAGTATTTCCC TERM 962 1228123 - 1228113 - g 74 -3.2 -5.47431 | opp_overlap 1228114, overlap 1228114 GTAATATATAAAAAA GGAA TTA CTCC AATTCATGTTTGTAC rplY 1228005 - 1228628 + | 50S ribosomal protein L25 pth 1228628 - 1229188 + | peptidyl-tRNA hydrolase OTT_1200 1229198 - 1230298 + | GTP-binding protein, Era/Obg family TERM 963 1230371 - 1230389 + F 100 -13.2 -3.59979 | opp_overlap 1230371 CCTTTATTATATGAA CTGGCGTT AAT AACGCCAG TTTAGGATAAGAAAA TERM 964 1230389 - 1230371 - f 100 -13.2 -3.29471 | opp_overlap 1230371 CCTTTATTATATGAA CTGGCGTT AAT AACGCCAG TTTAGGATAAGAAAA TERM 965 1230805 - 1230822 + F 76 -8.5 -3.56262 | CAATTTGTTACTACC GCTTTCT TTTC AGAAAGC TCTTTGTAACATTTA TERM 966 1231173 - 1231135 - f 78 -9.9 -2.76249 | opp_overlap 1231135, overlap 1231137 1231143 TAAATACTCTAAGTA TAGCTAAACTGCTATAA AACAG TTATAATAGTTTAGCTA TTACTATGACTTAGA TERM 967 1231135 - 1231173 + F 83 -9.9 -3.29739 | opp_overlap 1231135 1231137 1231143 TAAATACTCTAAGTA TAGCTAAACTGCTATAA AACAG TTATAATAGTTTAGCTA TTACTATGACTTAGA xthA2 1231669 - 1232463 + | exodeoxyribonuclease III TERM 968 1233372 - 1233356 - f 70 -8.1 -2.98942 | overlap 1233365 ATTTGGTGATATAGA TTAGAAG AAG CTTCTAA AGCAATTGCAATAAT OTT_1202 1233595 - 1233756 + | hypothetical protein OTT_1203 1235193 - 1234054 - | reverse transcriptase OTT_1204 1235177 - 1235617 + | hypothetical protein OTT_1205 1235733 - 1236014 + | hypothetical protein OTT_1206 1236830 - 1236018 - | N6 adenine-specific DNA-methyltransferase OTT_1207 1237989 - 1238606 + | putative integrase OTT_1208 1238585 - 1238908 + | putative integrase OTT_1209 1238966 - 1239289 + | hypothetical protein OTT_1210 1239289 - 1239681 + | putative conjugative transfer protein TraE OTT_1211 1239839 - 1240165 + | hypothetical protein OTT_1212 1240305 - 1240472 + | TPR repeat-containing protein 06_01 OTT_1213 1240525 - 1240677 + | hypothetical protein OTT_1214 1240737 - 1240952 + | TPR repeat-containing protein 02_02 TERM 969 1243303 - 1243264 - g 73 -8 -3.37901 | gap 1, overlap 1243265 AAATAGTCCAAGTAA TCCAATTGAAGGAGCTAGT GGC ACTA-CTCCTGCAACTGGT GCAAGCGATGCAGCT TERM 970 1243302 - 1243265 - g 86 -11.5 -2.62018 | gap 1, overlap 1243264 AATAGTCCAAGTAAT CCAATTGAAGGAGCTAGT GGC ACTA-CTCCTGCAACTGG TGCAAGCGATGCAGC TERM 971 1243521 - 1243484 - g 72 -9.3 -2.64258 | gap 1, overlap 1243483 AGTAATCCAAGTAAT CCAATTGAAGGAGCTAGT GGC ACTA-CTCCCGCAACTGG TGCCAGCGATGCAAC TERM 972 1245294 - 1245282 - g 75 -4.9 -5.00196 | opp_overlap 1245282, overlap 1245274 1245285 TTGGAAATAATAAAA TTATG AAT CATAA TTCACTTCAAGCACT TERM 973 1246489 - 1246461 - g 90 -12.5 -3.33696 | TTGTTGCGCAACCAA TTGCTGCTGGTGC TGG GCAACAACAGCAA CAACAGCAACAACAG TERM 974 1246953 - 1246938 - g 75 -2.6 -5.5208 | opp_overlap 1246944, overlap 1246944 GCAGAATAGAAAAAA TAAACA GTAA CGTTTA CTTATTATCTTTATA OTT_1215 1243046 - 1247572 + | outer membrane protein TERM 975 1247582 - 1247552 - T 79 -9.1 -3.41325 | opp_overlap 1247559, overlap 1247554 1247560 CATACTGGAATAATA TATGCAAAGGCTA GCTTT TAGCCCTTGCATT CCAGCATAGATAAAG TERM 976 1247580 - 1247554 - T 95 -11.7 -3.27158 | opp_overlap 1247559, overlap 1247552 1247560 TACTGGAATAATATA TGCAAAGGCTA GCTTT TAGCCCTTGCA TTCCAGCATAGATAA OTT_1216 1248736 - 1248560 - | hypothetical protein OTT_1217 1249197 - 1248991 - | putative integrase TERM 977 1249573 - 1249588 + H 76 -4 -5.52384 | overlap 1249575 TACTCTTAGTTGTGT TGTGGT ATAC ACCATA TTTTTTTGCTAAAGC OTT_1218 1250403 - 1250816 + | transposase TERM 978 1250934 - 1250918 - gf 71 -2.3 -5.38951 | overlap 1250925 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACACAAAAAAAAA OTT_1219 1250770 - 1250967 + | transposase TERM 979 1252870 - 1252840 - g 82 -6.3 -4.98522 | gap 1, opp_overlap 1252840, overlap 1252843 1252845 AAGGTCAGATAAAAA GCAT-ATTCTCTCA GATA TGAGAGAATCAGGC TCCATTGAACAAGAT TERM 980 1252864 - 1252845 - g 78 -9.4 -3.23684 | opp_overlap 1252840, overlap 1252843 1252840 CAGATAAAAAGCATA TTCTCTCA GATA TGAGAGAA TCAGGCTCCATTGAA OTT_1220 1252352 - 1252975 + | replicative DNA helicase OTT_1221 1253200 - 1253775 + | RelA/SpoT-related protein TERM 981 1254423 - 1254451 + F 91 -10.5 -3.91716 | opp_overlap 1254428, overlap 1254408 1254428 TTGGTTGATTTTGAA TCAAATAATGCTA TAT TTGCATTATTTGA TTATTTAGAAAATGA OTT_1222 1254514 - 1256664 + | repeat-containing protein F TERM 982 1256830 - 1256797 - f 85 -9.9 -3.38218 | opp_overlap 1256799 1256804, overlap 1256789 1256799 1256804 GCAAATACTCTACAA GAGATAATATACAAT TATA ATTGTATATTATCTT GAATATAGTTTCAAC TERM 983 1256828 - 1256799 - f 95 -12.5 -3.25481 | opp_overlap 1256799 1256804, overlap 1256797 1256804 AAATACTCTACAAGA GATAATATACAAT TATA ATTGTATATTATC TTGAATATAGTTTCA TERM 984 1256799 - 1256828 + F 95 -12.5 -3.17725 | opp_overlap 1256797 1256799 1256804, overlap 1256804 AAATACTCTACAAGA GATAATATACAAT TATA ATTGTATATTATC TTGAATATAGTTTCA TERM 985 1257072 - 1257050 - f 100 -7.8 -5.57729 | opp_overlap 1257050 AAAGAAGACAAAAAA TCCTCATTGA AAC TCAACAAGGA TTTATACCTCTTGCT OTT_1223 1257316 - 1258101 + | exodeoxyribonuclease III OTT_1224 1258598 - 1258143 - | putative conjugative transfer protein TraD OTT_1225 1258894 - 1259850 + | putative conjugative transfer protein TraA OTT_1226 1260425 - 1259955 - | peroxiredoxin, AhpC/TSA family protein OTT_1227 1261567 - 1260428 - | putative integrase TERM 986 1261016 - 1261028 + g 84 -3.4 -5.82172 | TTTATGAATTTTTAT TCCA TTAGC TGGA TTTTTTTCTATTAAT TERM 987 1261623 - 1261645 + H 71 -4.2 -5.14965 | overlap 1261624 1261625 AAAAACAATCTGTTG TATGCTTTTT TTG AAAAAGCAAG TTTTTTCGTAAAAAT TERM 988 1261625 - 1261643 + H 74 -9 -2.80472 | overlap 1261624 1261623 AAACAATCTGTTGTA TGCTTTTT TTG AAAAAGCA AGTTTTTTCGTAAAA OTT_1228 1261999 - 1262265 + | putative conjugative transfer protein TraD OTT_1229 1262622 - 1262503 - | transposase TERM 989 1263112 - 1263136 + G 84 -10.1 -3.46602 | TTTAGTAGGATTATT CTTGATAGCTA ATC TAGCTATCGGG TTATGGTATGGAAAG OTT_1230 1263071 - 1266508 + | sensor histidine kinase/response regulator/transporter hybrid protein OTT_1231 1267215 - 1267322 + | transposase TERM 990 1268551 - 1268583 + G 72 -8.7 -3.07816 | opp_overlap 1268543 1268557, overlap 1268557 AAAGTTAGCTTTGAA TTATAAGACTAAAAT GTT GTTTGAGTCTTATAA TTCAATAAGTGAAGA OTT_1232 1268108 - 1269037 + | ankyrin repeat-containing protein 15 OTT_1233 1269030 - 1269230 + | hypothetical protein OTT_1234 1269717 - 1269415 - | hypothetical protein OTT_1235 1269701 - 1270840 + | reverse transcriptase OTT_1236 1271513 - 1271358 - | ankyrin repeat-containing protein 03_10 OTT_1237 1273005 - 1271866 - | reverse transcriptase OTT_1238 1272989 - 1273288 + | hypothetical protein OTT_1239 1273546 - 1273827 + | hypothetical protein OTT_1240 1274466 - 1273837 - | N6 adenine-specific DNA-methyltransferase TERM 991 1274838 - 1274819 - H 70 -2.2 -5.38348 | opp_overlap 1274811 1274832, overlap 1274811 1274809 1274832 AAAAAGATGAAAAAA TTTTTCAT AATT ATGACAAA AAGTCATGTACTGCT OTT_1241 1275196 - 1275855 + | hypothetical protein OTT_1242 1276584 - 1276297 - | RelA/SpoT-related protein TERM 992 1276780 - 1276796 + r 70 -2.3 -5.46276 | overlap 1276777 TTTTTTCCTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATATCTT OTT_1243 1277032 - 1276841 - | putative conjugative transfer protein TraB OTT_1244 1277180 - 1277073 - | putative conjugative transfer protein TraB TERM 993 1277595 - 1277577 - H 70 -7.6 -3.47029 | TGAGGTAAATAGTAA TATTTATC CCA GATAAATA GCCGTAATTAATATA gst 1277677 - 1278345 + | glutathione S-transferase nusB 1279419 - 1278931 - | N utilization substance protein B hisS 1280702 - 1279431 - | histidyl-tRNA synthetase TERM 994 1279908 - 1279898 - G 71 -5.4 -4.71061 | ATGTATACTCAAAAA CTGT ATG ACAG TAATAATCTAACCCG OTT_1248 1281190 - 1280705 - | ABC transport system substrate-binding protein OTT_1249 1281557 - 1281195 - | hypothetical protein rnhA 1282035 - 1281529 - | ribonuclease H OTT_1251 1282562 - 1282035 - | hypothetical protein dsbA 1283515 - 1282691 - | thiol:disulfide interchange protein fdxA 1283964 - 1283644 - | ferredoxin ccmC 1284680 - 1283970 - | heme exporter protein C OTT_1255 1285404 - 1284673 - | hypothetical protein TERM 995 1284888 - 1284878 - GH 77 -4 -5.41746 | AATGGTTTAAAAAAA GATT GAT AATC GCTATTTTCTTGTAT glnA 1285403 - 1286233 + | glutamine synthetase TERM 996 1286339 - 1286362 + Tr 70 -5.4 -4.57073 | opp_overlap 1286339 GATATAGCTAAACCA GTATAAAACA GTTA TGTTATATAC TTTTTACAAAGCATA OTT_1257 1286903 - 1286631 - | transposase OTT_1258 1287877 - 1288104 + | putative integrase OTT_1259 1288151 - 1288312 + | putative integrase OTT_1260 1288315 - 1288785 + | peroxiredoxin, AhpC/TSA family protein OTT_1261 1288865 - 1289188 + | hypothetical protein OTT_1262 1289188 - 1289580 + | putative conjugative transfer protein TraE TERM 997 1289633 - 1289683 + T 100 -13.3 -2.84098 | opp_overlap 1289633 1289637, overlap 1289637 1289640 1289643 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 998 1289683 - 1289633 - T 100 -13.3 -4.84262 | opp_overlap 1289633 1289637 1289640 1289643, overlap 1289637 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 999 1289637 - 1289679 + T 80 -8.3 -4.10331 | opp_overlap 1289637 1289633, overlap 1289633 1289640 1289643 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 1000 1289679 - 1289637 - T 91 -8.3 -4.91657 | opp_overlap 1289633 1289637 1289640 1289643, overlap 1289633 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_1263 1290639 - 1289677 - | transposase TERM 1001 1290039 - 1290014 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 1290014 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 1002 1290185 - 1290201 + g 73 -8.1 -3.54574 | overlap 1290182 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG TERM 1003 1291486 - 1291500 + G 81 -10 -3.14013 | opp_overlap 1291479, overlap 1291485 1291495 AAACAGATCATCTAC GCTCTG TAC CAGAGC TGTTAGCTGTGATTG OTT_1264 1291020 - 1291601 + | putative conjugative transfer protein TraC OTT_1265 1291800 - 1292078 + | putative conjugative transfer protein TraC TERM 1004 1292679 - 1292669 - g 71 -6.8 -3.97108 | AAGTTTAAAATACAA GCTG TGC CAGC CATAATAGAACAACA TERM 1005 1292708 - 1292698 - g 70 -4 -4.99312 | opp_overlap 1292701, overlap 1292701 AATAGAACAACAAAA TAAG GTG CTTA AAATTAGCGAAATAA OTT_1266 1292075 - 1292734 + | putative conjugative transfer protein TraW OTT_1267 1292821 - 1293024 + | hypothetical protein OTT_1268 1293025 - 1294002 + | putative conjugative transfer protein TraU OTT_1269 1294025 - 1294408 + | putative conjugative transfer protein TrbC OTT_1270 1294405 - 1296096 + | putative conjugative transfer protein TraN TERM 1006 1296115 - 1296155 + F 100 -14.5 -4.4388 | opp_overlap 1296118 1296123 1296126, overlap 1296105 1296118 ACTTATTGAACTAGT AAATACAATAATTACTAAT ACA ATTAGTAATTATTGTATTA TTTATTGCTTTATAT TERM 1007 1296152 - 1296118 - f 100 -16.2 -3.84961 | opp_overlap 1296105 1296115 1296118, overlap 1296123 1296126 TATTGAACTAGTAAA TACAATAATTACTAAT ACA ATTAGTAATTATTGTA TTATTTATTGCTTTA TERM 1008 1296118 - 1296152 + F 100 -16.2 -4.30104 | opp_overlap 1296118 1296123 1296126, overlap 1296105 1296115 TATTGAACTAGTAAA TACAATAATTACTAAT ACA ATTAGTAATTATTGTA TTATTTATTGCTTTA TERM 1009 1296147 - 1296123 - f 90 -10.3 -3.87925 | opp_overlap 1296105 1296118 1296115, overlap 1296118 1296126 AACTAGTAAATACAA TAATTACTAAT ACA ATTAGTAATTA TTGTATTATTTATTG TERM 1010 1296144 - 1296126 - f 75 -7.6 -4.05193 | opp_overlap 1296105 1296118 1296115, overlap 1296123 1296118 TAGTAAATACAATAA TTACTAAT ACA ATTAGTAA TTATTGTATTATTTA OTT_1271 1296255 - 1297055 + | ankyrin repeat-containing protein 16 OTT_1272 1297392 - 1297868 + | putative conjugative transfer protein TraF OTT_1273 1298355 - 1298053 - | hypothetical protein OTT_1274 1298339 - 1299478 + | reverse transcriptase OTT_1275 1299891 - 1300784 + | putative conjugative transfer protein TraH OTT_1276 1300708 - 1300968 + | putative conjugative transfer protein TraH OTT_1278 1302066 - 1301221 - | putative conjugative transfer protein TraI OTT_1277 1300949 - 1301482 + | putative conjugative transfer protein TraD TERM 1011 1301843 - 1301826 - GT 70 -8.5 -2.52543 | ATGTTTTTGAATTCA GAGCTAA TATC TTAGCTC CAGTAATTTCATCTT OTT_1279 1302779 - 1302432 - | putative conjugative transfer protein TraA OTT_1280 1302994 - 1302764 - | putative conjugative transfer protein TraA OTT_1281 1303007 - 1303177 + | putative conjugative transfer protein TraD OTT_1282 1303292 - 1304323 + | hypothetical protein TERM 1012 1304443 - 1304486 + T 100 -16.6 -4.28432 | gap 1, opp_overlap 1304449 1304453, overlap 1304447 ATACTACTTTTTTTT GAACCAGCAATATTTATTTTA TTT TAAAATAAATATTGCT-GTTC TTTTGAATTAGCATT TERM 1013 1304447 - 1304483 + T 100 -18.5 -4.25859 | opp_overlap 1304449 1304453, overlap 1304443 TACTTTTTTTTGAAC CAGCAATATTTATTTTA TTT TAAAATAAATATTGCTG TTCTTTTGAATTAGC TERM 1014 1304481 - 1304449 - T 100 -15.3 -2.70932 | opp_overlap 1304447 1304443, overlap 1304453 CTTTTTTTTGAACCA GCAATATTTATTTTA TTT TAAAATAAATATTGC TGTTCTTTTGAATTA TERM 1015 1304477 - 1304453 - T 78 -8.9 -3.27298 | opp_overlap 1304447 1304443, overlap 1304449 TTTTTGAACCAGCAA TATTTATTTTA TTT TAAAATAAATA TTGCTGTTCTTTTGA OTT_1283 1304803 - 1304615 - | RelA/SpoT-related protein TERM 1016 1304722 - 1304739 + g 82 -2.7 -5.95946 | GACGCAATATTTTAA TCATTTC TCTA GAACTGA TTTTTTTATTATTCC OTT_1284 1305240 - 1304908 - | RelA/SpoT-related protein OTT_1285 1305763 - 1305395 - | hypothetical protein TERM 1017 1305623 - 1305640 + g 79 -7.1 -4.5028 | TACTGCCTGTAGTCT GTAATTG TCAC CAATTAC TTCTTTTGTTGTACT TERM 1018 1305738 - 1305748 + g 70 -4 -4.95758 | TTCATTTCTATTTCT GAAT CGA ATTC TTTTTCTAATATCAT OTT_1286 1306454 - 1305786 - | hypothetical protein OTT_1287 1307170 - 1306469 - | hypothetical protein TERM 1019 1307185 - 1307199 + r 70 -2.9 -5.20328 | CATTATTCTCCTACG GTTAA GTTTA TTAAC TTTGTTTTTTTAGAA TERM 1020 1307251 - 1307229 - R 93 -11.4 -3.55453 | opp_overlap 1307229, overlap 1307223 1307225 1307239 AATTTAAAATAGCAA GCTTAGCTAA CTG TCAGCTAAGC TGATTGGCATATGAC TERM 1021 1307229 - 1307251 + r 73 -9.2 -2.74563 | opp_overlap 1307223 1307229 1307225 1307239 AATTTAAAATAGCAA GCTTAGCTAA CTG TCAGCTAAGC TGATTGGCATATGAC OTT_1288 1307513 - 1307235 - | hypothetical protein TERM 1022 1307456 - 1307476 + g 84 -5.6 -5.40873 | GTAACAGTTTTGACT GTATATTT TTATT AAATATAC TTTTATTTTTCTGTT TERM 1023 1307703 - 1307668 - R 80 -10 -2.77962 | gap 1, opp_overlap 1307673, overlap 1307667 1307673 TCTTATATTTCAAAG CAACAGATAAAG-CTGT AGT ACAGTCTTTATCTTTTG AATTGACAAGTGTAC TERM 1024 1307673 - 1307698 + r 83 -8.5 -4.27316 | gap 1, opp_overlap 1307673 1307668 1307667 TATTTCAAAGCAACA GATAAAG-CTGT AGT ACAGTCTTTATC TTTTGAATTGACAAG TERM 1025 1307698 - 1307673 - R 75 -8.5 -3.33865 | gap 1, opp_overlap 1307673, overlap 1307668 1307667 TATTTCAAAGCAACA GATAAAG-CTGT AGT ACAGTCTTTATC TTTTGAATTGACAAG OTT_1289 1308276 - 1307770 - | transposase OTT_1290 1308637 - 1308263 - | transposase OTT_1291 1309633 - 1309151 - | hypothetical protein TERM 1026 1309534 - 1309556 + g 74 -5.7 -4.58283 | GTAATATCTTTGATC TATCACATT CTGTT AGTGTGATA TTTTTAAGCAACTTA OTT_1292 1310563 - 1309685 - | hypothetical protein TERM 1027 1309941 - 1309967 + g 76 -5.4 -4.96523 | opp_overlap 1309941 1309953, overlap 1309954 GAAGTTCGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 1028 1310089 - 1310070 - G 75 -5 -5.00884 | opp_overlap 1310071, overlap 1310071 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCAGGTTGGA TERM 1029 1310071 - 1310088 + g 88 -8.5 -4.46233 | opp_overlap 1310071 1310070 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 1030 1310088 - 1310071 - G 77 -8.5 -3.60048 | opp_overlap 1310071, overlap 1310070 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 1031 1310160 - 1310178 + g 70 -4.6 -4.82901 | overlap 1310162 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA OTT_1293 1310760 - 1311038 + | transposase TERM 1032 1312180 - 1312154 - g 77 -4.6 -5.30189 | overlap 1312156 1312158 CACAACATGAAAAAA TGTATTATAACA GTT TGTCATAATAAA CGTACCTCTAGCAAT TERM 1033 1312186 - 1312199 + G 71 -5.3 -4.58685 | TCATAATAAACGTAC CTCTA GCAA TAGAG TTTTTAACAAAATTT TERM 1034 1312493 - 1312509 + G 79 -8.1 -4.09321 | opp_overlap 1312492 1312493 GACATAGATGATAAG CGTTTAT TAA ATAAACG TTCTTTAATTGAGTC OTT_1294 1312145 - 1312684 + | transposase greA 1313305 - 1313784 + | GreA protein rpoH 1313831 - 1314730 + | heat shock sigma factor RpoH OTT_1297 1315962 - 1315420 - | hypothetical protein OTT_1298 1318008 - 1317706 - | transposase TERM 1035 1317844 - 1317860 + g 71 -2.3 -5.38951 | overlap 1317841 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTT_1299 1318457 - 1318020 - | transposase OTT_1300 1320379 - 1318892 - | ankyrin repeat-containing protein 12_02 OTT_1301 1320707 - 1321063 + | putative conjugative transfer protein TraC OTT_1302 1321155 - 1321316 + | putative conjugative transfer protein TraC OTT_1303 1321388 - 1322383 + | putative conjugative transfer protein TraC OTT_1304 1322449 - 1322928 + | putative conjugative transfer protein TraN OTT_1305 1322915 - 1323619 + | putative conjugative transfer protein TraN OTT_1306 1325031 - 1323892 - | reverse transcriptase OTT_1307 1325144 - 1325455 + | hypothetical protein OTT_1308 1326023 - 1325793 - | transposase TERM 1036 1325859 - 1325875 + g 71 -2.3 -5.38951 | overlap 1325856 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTT_1309 1326884 - 1327312 + | putative conjugative transfer protein TraA OTT_1310 1327385 - 1327630 + | putative conjugative transfer protein TraA OTT_1311 1328612 - 1328136 - | hypothetical protein TERM 1037 1328377 - 1328403 + g 71 -2.2 -5.49568 | opp_overlap 1328377 1328380, overlap 1328381 GCTTTACCGTTAATA CTATCTATCTGA TTA TCAGAAAGTTTG TTTTTCTTTTGAATT TERM 1038 1328381 - 1328399 + g 83 -6 -5.18409 | opp_overlap 1328380 1328377, overlap 1328377 TACCGTTAATACTAT CTATCTGA TTA TCAGAAAG TTTGTTTTTCTTTTG TERM 1039 1328656 - 1328679 + r 81 -9.8 -3.00986 | overlap 1328653 1328658 AAATCATCACCTTGT TATTATAAGC TTAA GCTTATAATA TGATTTACTGTAATT TERM 1040 1328658 - 1328677 + r 70 -8 -3.05159 | overlap 1328656 1328653 ATCATCACCTTGTTA TTATAAGC TTAA GCTTATAA TATGATTTACTGTAA cycM 1330093 - 1329545 - | cytochrome c TERM 1041 1329609 - 1329649 + g 79 -8 -4.07868 | opp_overlap 1329613 1329620, overlap 1329620 TTAGCATTAGGTAAT CCAA-TAAATGACATTCTAG TAC CTGGAATGT-ATTTAGTTGG TTTATGTAAATATAA TERM 1042 1329620 - 1329638 + g 75 -8.2 -3.60638 | opp_overlap 1329620 1329613, overlap 1329609 TAATCCAATAAATGA CATTCTAG TAC CTGGAATG TATTTAGTTGGTTTA TERM 1043 1330179 - 1330206 + H 70 -8 -3.09749 | gap 1, opp_overlap 1330179, overlap 1330183 AAATTATCTTTAAAA CTAAGTTGATTTG CAC CAAAT-AACTTAG TATATATTACAAATA TERM 1044 1330206 - 1330179 - H 80 -8 -4.13304 | gap 1, opp_overlap 1330179 1330183 AAATTATCTTTAAAA CTAAGTTGATTTG CAC CAAAT-AACTTAG TATATATTACAAATA OTT_1313 1330341 - 1331300 + | hypothetical protein TERM 1045 1332179 - 1332160 - f 79 -9.4 -3.23711 | overlap 1332170 TTGACAATTTACTAA TGCTATCA GATT TGATAGCA AAAGAAGCAAAGTTG OTT_1314 1332255 - 1332608 + | transposase TERM 1046 1332631 - 1332617 - g 71 -2.9 -5.23765 | GAAATAAGAGAAAAA TATCA ACAAG TGATA AGTGCTATACCTAAG OTT_1315 1332587 - 1333126 + | transposase mrp 1334645 - 1333629 - | Mrp protein hflK 1334825 - 1335880 + | HflK protein hflC 1335904 - 1336770 + | HflC protein OTT_1319 1336788 - 1338188 + | 47 kDa protein (periplasmic serine protease) TERM 1047 1338192 - 1338230 + F 75 -9.3 -2.69957 | gap 1, opp_overlap 1338194 1338201, overlap 1338201 ATTAATAAGTAAATC TAGTTTAAAGGCGATTTT AAAA AAAATTGCCTTTAAA-TA TCAATTGTTAATTTA TERM 1048 1338201 - 1338222 + F 76 -8.1 -3.72588 | opp_overlap 1338201 1338194, overlap 1338192 TAAATCTAGTTTAAA GGCGATTTT AAAA AAAATTGCC TTTAAATATCAATTG ompA 1338402 - 1339016 + | peptidoglycan-associated lipoprotein TERM 1049 1339024 - 1339073 + T 71 -8.3 -3.15459 | gap 1, opp_overlap 1339024 1339023 1339027, overlap 1339027 1339071 TAGCATAGAAGTAAT TAAGAATATCTTCTCACAGAATAA GAT TTCTTCT-TGAAGAGATATTCTTA TATGTGTTATACATA TERM 1050 1339187 - 1339216 + T 100 -9.5 -5.32699 | opp_overlap 1339192, overlap 1339189 ATATTTTATTAATTC CAGAAGTTATAGT ATTT ACTATAACTTCTA TTTTTTAGTATTTAA TERM 1051 1339189 - 1339214 + T 100 -12.1 -4.27753 | opp_overlap 1339192, overlap 1339187 ATTTTATTAATTCCA GAAGTTATAGT ATTT ACTATAACTTC TATTTTTTAGTATTT TERM 1052 1339211 - 1339192 - T 73 -8 -3.37464 | opp_overlap 1339189 1339187 TTATTAATTCCAGAA GTTATAGT ATTT ACTATAAC TTCTATTTTTTAGTA TERM 1053 1339294 - 1339332 + T 86 -9 -4.12474 | ATTATTTTGATGTTT TTGCAGCAGTACTGACTA TAT TACTTGTTACTGCTGCAA TTATTATTATTAATT OTT_1321 1342063 - 1339280 - | hypothetical protein TERM 1054 1339731 - 1339761 + g 82 -6.4 -5.09762 | opp_overlap 1339731 GCTGACAGATGTAAA TTAGTTTTGTGA TTACGTT TCATAAAACTAA TTTTATTTATTGCGC TERM 1055 1340104 - 1340079 - G 80 -10.7 -2.78463 | opp_overlap 1340085, overlap 1340085 ATGTTTTCTACCATA TTAGAATATTG TTGC CAATATTCTAA ACTAGCTTTAATTGC TERM 1056 1340139 - 1340155 + g 74 -9.5 -2.64299 | opp_overlap 1340139 1340138, overlap 1340138 1340136 CTTTGAATTAAGAAG TCTACTG CTC CAGTAGA GTATTTAGGATATTG TERM 1057 1340155 - 1340139 - G 75 -9.5 -2.88366 | opp_overlap 1340138 1340136 1340139, overlap 1340138 CTTTGAATTAAGAAG TCTACTG CTC CAGTAGA GTATTTAGGATATTG trxB2 1342262 - 1343278 + | thioredoxin reductase TERM 1058 1343902 - 1343879 - gT 73 -8.2 -3.46602 | opp_overlap 1343881 CTTTGCATACTAGAA CAGCTGATAT TGTA ATTTCAGCTG TTGGAAAGGCGAATT OTT_1324 1345500 - 1344115 - | hypothetical protein folD 1343275 - 1344180 + | methylenetetrahydrofolate dehydrogenase topA 1347866 - 1345500 - | DNA topoisomerase I TERM 1059 1346639 - 1346620 - G 72 -5.8 -4.40993 | gap 1, opp_overlap 1346620 1346633 1346634, overlap 1346635 TAGAAACCATCAAAA GCTA-TGGT TGA ACCAGTAGC TTTAGCTACATGTAG mdh 1348915 - 1347959 - | malate dehydrogenase TERM 1060 1348646 - 1348660 + g 74 -6.4 -4.45083 | overlap 1348647 ATTGACTAGATCATT TCTGGA CAT TCCAGG TTTTCTAGCTATACC rimM 1349629 - 1349135 - | 16S rRNA processing protein RimM TERM 1061 1349752 - 1349740 - H 72 -4.9 -4.87273 | AATATGCTATAAAAA CTTAA TTA TTAAG CATATTACAAAAATT TERM 1062 1350410 - 1350429 + G 74 -9.4 -2.68886 | opp_overlap 1350409 1350413, overlap 1350413 GTGTTAAATAAGCAT CAATTACC AGTA GGTAATTG TAAATTGTTAGTTAA OTT_1328 1349798 - 1352329 + | hypothetical protein fmt 1353452 - 1352544 - | methionyl-tRNA formyltransferase def 1354009 - 1353464 - | methionyl-tRNA deformylase OTT_1331 1354192 - 1356669 + | putative conjugative transfer protein TraI TERM 1063 1357072 - 1357046 - g 79 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTACAACGGCA OTT_1332 1356721 - 1357740 + | putative transposase TERM 1064 1357760 - 1357730 - T 87 -9.3 -3.92369 | opp_overlap 1357729, overlap 1357728 1357732 ATTTAAAAAATAACA TAGAGTATTAATT TTTCG AATTAATACTCCA CTAATTTAAGTTTTT TERM 1065 1357758 - 1357732 - T 84 -9.7 -3.52788 | opp_overlap 1357729, overlap 1357730 1357728 TTAAAAAATAACATA GAGTATTAATT TTTCG AATTAATACTC CACTAATTTAAGTTT OTT_1333 1358280 - 1357750 - | putative conjugative transfer protein TraD TERM 1066 1359099 - 1359110 + G 71 -3 -5.13741 | opp_overlap 1359099 TGCCACAATATAATA TTTG CAAC CAAA TTTTTATTAAATTAC OTT_1334 1358960 - 1359985 + | hypothetical protein TERM 1067 1360220 - 1360200 - g 85 -2.6 -6.15828 | TCCATCAAAAAAAAA CTAATGTT ATAGG AGCATTAG TAGATAAATTGCTGC TERM 1068 1360411 - 1360377 - g 100 -11.7 -4.65895 | opp_overlap 1360377 GTTTGCATTTAAAAA CTATGATAGAAAATG ATATA CATATTCTATCATAG TTTTTAAATTATAGC TERM 1069 1360377 - 1360411 + G 100 -11.7 -4.78149 | opp_overlap 1360377 GTTTGCATTTAAAAA CTATGATAGAAAATG ATATA CATATTCTATCATAG TTTTTAAATTATAGC OTT_1335 1360166 - 1360411 + | hypothetical protein TERM 1070 1360461 - 1360423 - f 71 -8.5 -2.91322 | opp_overlap 1360423, overlap 1360420 1360458 ATAGTTTTTAAATTA TAGCTAAACTAGTATAA AACAG TTATAATAATTTAGCTA TTACTATAGCCTAGA OTT_1336 1360633 - 1361217 + | hypothetical protein TERM 1071 1361258 - 1361237 - T 81 -8.1 -4.4195 | opp_overlap 1361237 1361257 ATATAGCCTATAAAA GGAGAAATT ATTT AACTTCTCC TTTATATAAATTATA ppiD 1362797 - 1361244 - | peptidyl-prolyl cis-trans isomerse D tpiA 1362877 - 1363626 + | triosephosphate isomerase secG 1363632 - 1363925 + | protein-export membrane protein SecG TERM 1072 1364586 - 1364610 + T 70 -5.9 -4.30034 | opp_overlap 1364586 1364589 ATTGCTAAGAAATAA GAATTTTATAA AAA TTATATAATTC TTTTCATGAAATTTT lysS 1366269 - 1364689 - | lysyl-tRNA synthetase TERM 1073 1366565 - 1366575 + GH 70 -4 -4.97383 | CTTACCAAAGGTGGC CATA TTA TATG TTGTTTTTTTTAAGT OTT_1341 1366408 - 1366956 + | hypothetical protein TERM 1074 1367087 - 1367097 + GF 75 -2.4 -5.52384 | opp_overlap 1367087 CTAGAACATGAAGAG GAGC ATT GCGC TTTTTTTGCTCAGCA coq7 1366919 - 1367464 + | ubiquinone biosynthesis protein Coq7 psd 1367565 - 1368257 + | phosphatidylserine decarboxylase TERM 1075 1368552 - 1368562 + G 74 -5.4 -4.89562 | GGAGCGGAGTTAGAC TCAC TTT GTGA TTTTGTTAATTTTGG pssA 1368309 - 1369082 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1076 1369083 - 1369111 + F 100 -12.1 -5.90981 | opp_overlap 1369083 1369079 AGAAGAATTAATTAA TATTGAATATAAT TGT ATTATATTCAATA TTTTTTTTAGTATAA TERM 1077 1369111 - 1369083 - f 95 -12.1 -3.50854 | opp_overlap 1369083, overlap 1369079 AGAAGAATTAATTAA TATTGAATATAAT TGT ATTATATTCAATA TTTTTTTTAGTATAA OTT_1345 1369132 - 1369617 + | hypothetical protein TERM 1078 1369662 - 1369672 + F 71 -2.6 -5.4833 | GGATGTATATTTGTC TTAA TAG TTAA TTTTTTATTAGCTAA TERM 1079 1371970 - 1371950 - g 74 -6.9 -4.26188 | opp_overlap 1371955, overlap 1371953 CTGATATAGTCAAAA CGATATCTG CAA CAGATATTG AAATGCTAATTAGAA OTT_1346 1369897 - 1372737 + | hypothetical protein nuoN3 1374602 - 1372929 - | NADH dehydrogenase I chain N sucD 1375549 - 1374671 - | succinyl-CoA synthetase alpha chain sucC 1376724 - 1375564 - | succinyl-CoA synthetase beta chain ubiH 1378043 - 1376781 - | UbiH protein TERM 1080 1377399 - 1377388 - G 73 -4.4 -5.1101 | CCATTAGGCAAAAAA TGCT CAAC AGCA GTTCCAAGGTGTTGT OTT_1351 1378985 - 1378398 - | hypothetical protein TERM 1081 1378850 - 1378860 + g 70 -4 -5.04601 | CTTGTGCTACTTCAC CATT TGC AATG TTTTTGATTTCTAAC ileS 1382316 - 1379113 - | isoleucyl-tRNA synthetase TERM 1082 1381480 - 1381492 + g 72 -3.5 -5.25699 | opp_overlap 1381482 AGCGAATTTTCCTAA TATAT AGC ATATA TTTTTATTCTGTGAT OTT_1353 1382958 - 1382353 - | hypothetical protein rpsU 1383129 - 1383335 + | 30S ribosomal protein S21 holC 1383873 - 1383364 - | DNA polymerase III chi subunit HolC proP4 1383968 - 1385209 + | proline/betaine transporter TERM 1083 1385745 - 1385732 - g 74 -3.9 -5.30155 | opp_overlap 1385732, overlap 1385725 CTATTAATTAAAAAA TTACT GCTT AGTAA TTCTTCAGGCTCTAC OTT_1357 1385453 - 1386178 + | hypothetical protein OTT_1358 1386270 - 1387523 + | hypothetical protein TERM 1084 1387712 - 1387722 + G 71 -5.4 -4.60889 | CATTGGTTACATCTA TTGC TCT GCAA TTTTTAAGCATGATT OTT_1359 1387684 - 1388061 + | hypothetical protein TERM 1085 1388218 - 1388203 - T 70 -6.2 -4.08546 | opp_overlap 1388202 1388203 AGTATGAAGTATAAA GTATGT CATA ACATAC ATTTCTTGAAAAAAA pnp 1390493 - 1388283 - | polyribonucleotide nucleotidyltransferase rpsO 1391027 - 1390758 - | 30S ribosomal protein S15 truB 1391959 - 1391051 - | tRNA pseudouridine 55 synthase TERM 1086 1391287 - 1391309 + g 90 -12.2 -3.11732 | opp_overlap 1391282 1391271, overlap 1391278 CCTTAAGGCATGCTA TAGTTTTAGC GAA GCTAAAACTA TTCAATGCATTTAGA TERM 1087 1392694 - 1392678 - g 73 -8.1 -3.54574 | overlap 1392687 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 1088 1392840 - 1392865 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 1392840 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_1363 1392234 - 1393202 + | transposase TERM 1089 1393196 - 1393246 + T 100 -13.3 -4.84262 | opp_overlap 1393196 1393200 1393203 1393206, overlap 1393200 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1090 1393246 - 1393196 - T 100 -13.3 -2.84098 | opp_overlap 1393196 1393200, overlap 1393200 1393203 1393206 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1091 1393200 - 1393242 + T 91 -8.3 -4.91657 | opp_overlap 1393196 1393200 1393203 1393206, overlap 1393196 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1092 1393242 - 1393200 - T 80 -8.3 -4.10331 | opp_overlap 1393200 1393196, overlap 1393196 1393203 1393206 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_1364 1394043 - 1393495 - | transposase TERM 1093 1393583 - 1393599 + g 73 -8.1 -3.54574 | overlap 1393580 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_1365 1395040 - 1394600 - | hypothetical protein OTT_1366 1395966 - 1395637 - | hypothetical protein OTT_1367 1396219 - 1395944 - | putative conjugative transfer protein TraD OTT_1368 1396544 - 1396185 - | putative conjugative transfer protein TraD TERM 1094 1396439 - 1396449 + gr 100 -6.8 -6.0427 | CGCTTTTTAGCATTT TGGC TAG GCCA TTTTTTTTGTATCCT OTT_1369 1396949 - 1396605 - | putative conjugative transfer protein TraD OTT_1370 1397630 - 1397244 - | TPR repeat-containing protein 01_08 OTT_1371 1398261 - 1397818 - | putative conjugative transfer protein TraG TERM 1095 1398244 - 1398233 - G 72 -5.8 -4.41422 | TTAGATACAAAATAA CTCG TTTG CGAG GAAAGAGAAGCAAAC TERM 1096 1398350 - 1398300 - R 100 -13.3 -4.84262 | opp_overlap 1398300 1398304 1398307 1398310, overlap 1398304 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 1097 1398300 - 1398350 + r 100 -13.3 -2.84098 | opp_overlap 1398300 1398304, overlap 1398304 1398307 1398310 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 1098 1398304 - 1398346 + r 80 -8.3 -4.10331 | opp_overlap 1398304 1398300, overlap 1398300 1398307 1398310 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 1099 1398346 - 1398304 - R 91 -8.3 -4.91657 | opp_overlap 1398300 1398304 1398307 1398310, overlap 1398300 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_1372 1399312 - 1398344 - | transposase TERM 1100 1398706 - 1398681 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 1398681 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 1101 1398852 - 1398868 + g 73 -8.1 -3.54574 | overlap 1398849 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_1373 1399818 - 1399483 - | putative conjugative transfer protein TraG OTT_1374 1400303 - 1399818 - | putative conjugative transfer protein TraH OTT_1375 1401121 - 1400492 - | putative conjugative transfer protein TraH TERM 1102 1401371 - 1401383 + H 76 -9.1 -3.08464 | opp_overlap 1401371 TTTTTGTGAGGAAAA GCGCT TCC AGCGC TTGCCTACATACTAG TERM 1103 1401383 - 1401371 - H 86 -9.1 -4.25104 | opp_overlap 1401371 TTTTTGTGAGGAAAA GCGCT TCC AGCGC TTGCCTACATACTAG infA 1401887 - 1402111 + | translation initiation factor IF-1 maf 1402154 - 1402750 + | septum formation associated protein Maf TERM 1104 1403040 - 1403024 - g 74 -8.7 -3.20345 | opp_overlap 1403024, overlap 1403022 AATCCTAGATTAAGA GCTGCTA TTT CAGCAGC TAAATTTAATAACTT OTT_1378 1402877 - 1403626 + | hypothetical protein gyrA 1403728 - 1406445 + | DNA gyrase subunit A TERM 1105 1407466 - 1407494 + G 100 -14.8 -4.33105 | TTACTAGATGCAGCT GGCATTACTTGT AATAA ACAAGTAATGCC TTTTGATACTACTTC glyA 1406479 - 1407759 + | serine hydroxymethyltransferase TERM 1106 1408090 - 1408052 - T 100 -14.3 -2.86164 | opp_overlap 1408060, overlap 1408054 1408060 TTGGCAATCATTATA TAGCTAAACTACTATAA AACAG TTATAATAGTTTAGCTA TCACTATAGCCTAGA TERM 1107 1408088 - 1408054 - T 95 -12.5 -2.98015 | opp_overlap 1408060, overlap 1408052 1408060 GGCAATCATTATATA GCTAAACTACTATAA AACAG TTATAATAGTTTAGC TATCACTATAGCCTA OTT_1381 1410941 - 1408449 - | hypothetical protein TERM 1108 1408537 - 1408520 - G 74 -6.3 -4.386 | TAATTCCGTATAAAA CAGGAAA ACAT CTTCCTG CAATATTATAGTAAC TERM 1109 1410514 - 1410530 + g 71 -2.3 -5.38249 | overlap 1410516 TCTATATTATTAATT TTTATAG TGC CTATATA TTTTTTATCGTTAGT rnpA 1411716 - 1411177 - | ribonuclease P rpmH 1411851 - 1411717 - | 50S ribosomal protein L34 fbcH 1412734 - 1413528 + | cytochrome c1, heme protein precursor rph 1414772 - 1414017 - | ribonuclease PH grpE 1414902 - 1415498 + | heat shock protein GrpE OTT_1387 1415999 - 1415868 - | transposase TERM 1110 1416791 - 1416803 + r 74 -2.7 -5.60993 | TGGATGGAAAGAGCT TTGGT ATA ATCAA TTTTTTTATCAAACC rnd 1417482 - 1416850 - | ribonuclease D OTT_1389 1417788 - 1417489 - | hypothetical protein cdsA 1418446 - 1417796 - | phosphatidate cytidylyltransferase uppS 1419144 - 1418449 - | UPP synthetase uup 1419320 - 1421125 + | ABC transporter ATP-binding protein Uup dnaE 1425147 - 1421443 - | DNA polymerase III alpha chain TERM 1111 1422133 - 1422171 + g 86 -11.3 -2.78395 | gap 1, overlap 1422130 AATATGCTTTGCCTG TTTGCTAGCATAG-TTGT TAAT ACGATCTATGCTGGCAAA TAATTGGTGGCGGTT TERM 1112 1422434 - 1422450 + g 70 -8.1 -3.049 | TTATTTATATTTGGA GGTATAA CCT TTATACC TAATTGTTTAGCTTC TERM 1113 1422777 - 1422794 + g 79 -8.5 -3.827 | TACTAAGGGTATATT TAGCAAG AACC CTTGCTA TTTCCATTACTTGTT TERM 1114 1425036 - 1425013 - G 100 -12.6 -4.17987 | TAAAGAACCAAATAA GTTGCTCTTA TCAG TAAGAGCAAC TGCTGGCATTTCATA valS 1427701 - 1425137 - | valyl-tRNA synthetase TERM 1115 1427461 - 1427484 + g 75 -9.8 -2.8661 | opp_overlap 1427461, overlap 1427458 TATCATCAAACCCAA TTGGAAAAAA TATA TTTTTTCCAA TCATTCGTTGATATC TERM 1116 1427484 - 1427461 - G 78 -9.8 -3.31415 | opp_overlap 1427461 1427458 TATCATCAAACCCAA TTGGAAAAAA TATA TTTTTTCCAA TCATTCGTTGATATC ubiA 1427733 - 1428608 + | 4-hydroxybenzoate octaprenyltransferase TERM 1117 1428832 - 1428795 - T 75 -7.4 -4.10744 | opp_overlap 1428791 1428790 1428797 GCATTGAAATAATAA CATATCATAATATA TTATCTATGC TATATTATGATATG TTGGGGTTTTATAAA OTT_1396 1429652 - 1428876 - | hypothetical protein TERM 1118 1430383 - 1430371 - g 88 -6.3 -5.45802 | TGCGCAAAATAAAAA CAGAA AAA TTCTG ATGGGATTTAGTGAT mccF 1430003 - 1431001 + | microcin C7 self-immunity protein TERM 1119 1432171 - 1432199 + T 93 -11.3 -3.58518 | opp_overlap 1432170 1432169 1432174 1432179, overlap 1432169 1432174 1432179 TTTAGCCAAACAAGG CAAGAAGATTATA AGC TATAATTTTCTTG TATTTACTTGCTATT TERM 1120 1432174 - 1432196 + T 72 -7.2 -3.90901 | opp_overlap 1432170 1432169 1432174 1432179, overlap 1432171 1432169 1432179 AGCCAAACAAGGCAA GAAGATTATA AGC TATAATTTTC TTGTATTTACTTGCT OTT_1398 1432630 - 1432349 - | putative integrase OTT_1399 1433068 - 1432694 - | transposase TERM 1121 1432904 - 1432920 + gr 71 -2.3 -5.38951 | overlap 1432901 TTTTTTATTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT OTT_1400 1433195 - 1433022 - | transposase TERM 1122 1433605 - 1433581 - R 70 -6.5 -4.07568 | opp_overlap 1433581, overlap 1433584 TGTCTGGTTTCAAAA GAAGTCTATTA TAT TAATCGACCTC TGTATTCAAGTCAAT OTT_1401 1434048 - 1433788 - | hypothetical protein TERM 1123 1434442 - 1434422 - R 93 -9.1 -4.63952 | ATGACAAAGAATAAA TTAACACGG ATA CCGTATTAA GAATCAAGAAAAGAA TERM 1124 1434505 - 1434455 - R 100 -13.3 -4.84262 | opp_overlap 1434459 1434462 1434465, overlap 1434459 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATGAATTGAAATA TERM 1125 1434459 - 1434501 + r 78 -8.3 -3.99405 | opp_overlap 1434455 1434459, overlap 1434462 1434465 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATGAATTGA TERM 1126 1434501 - 1434459 - R 91 -8.3 -4.91657 | opp_overlap 1434459 1434462 1434465, overlap 1434455 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATGAATTGA coxB 1435440 - 1434580 - | cytochrome c oxidase polypeptide II TERM 1127 1434789 - 1434779 - G 74 -6.8 -4.30844 | overlap 1434782 ACTTTAGTACCAAAA GCAG GTA CTGC AAAACTATGAATTGC TERM 1128 1435242 - 1435220 - G 72 -3.4 -5.19998 | overlap 1435221 ACAATCAAAACAAAA TCATGGAGAC CAC GTATCGATGA CATTGCTTCTGTTAC OTT_1403 1435963 - 1435487 - | hypothetical protein TERM 1129 1437603 - 1437622 + G 76 -9.4 -3.14126 | CCAGTTATTAATCCT CCATGTTT ATTC AAACATGG TATTGGCCTTTATGC TERM 1130 1437756 - 1437772 + G 75 -5.1 -5.1101 | overlap 1437757 AGCTCTCTTAATTCT ACTGAGT TAG ACTCAGG TTTTTTGGATACTAC TERM 1131 1437757 - 1437771 + G 77 -8.6 -3.65883 | overlap 1437756 GCTCTCTTAATTCTA CTGAGT TAG ACTCAG GTTTTTTGGATACTA virB6 1437129 - 1439345 + | type IV secretion system protein VirB6 TERM 1132 1439470 - 1439443 - T 83 -8.6 -4.37554 | overlap 1439444 AAAGTGAAACAGAAA TTTGCTTATGTT TTTA AACATAAGCAAG CAATGCAGAGAGGAT TERM 1133 1439469 - 1439444 - T 95 -12.1 -3.20906 | overlap 1439443 AAGTGAAACAGAAAT TTGCTTATGTT TTTA AACATAAGCAA GCAATGCAGAGAGGA OTT_1405 1440689 - 1440465 - | hypothetical protein OTT_1406 1441168 - 1440890 - | TPR repeat-containing protein 07 uvrA 1444511 - 1441638 - | excinuclease ABC subunit A TERM 1134 1443074 - 1443064 - G 70 -4 -5.02476 | opp_overlap 1443053 1443064 ACATTCTTTAAAAAA GATA TCC TATC CTTAATTTCTTTTAT TERM 1135 1444581 - 1444614 + H 100 -14.3 -2.78384 | opp_overlap 1444581 1444584 1444590, overlap 1444584 1444590 CTATAGTCGCAATCA TAATTATAATTGACT AGAT AGTCAATTATAATTA TATGGTAACAAAAAA TERM 1136 1444614 - 1444581 - H 100 -14.3 -2.72991 | opp_overlap 1444581 1444584 1444590, overlap 1444584 1444590 CTATAGTCGCAATCA TAATTATAATTGACT AGAT AGTCAATTATAATTA TATGGTAACAAAAAA TERM 1137 1444584 - 1444611 + H 93 -11.6 -3.54475 | opp_overlap 1444584 1444581 1444590, overlap 1444581 1444590 TAGTCGCAATCATAA TTATAATTGACT AGAT AGTCAATTATAA TTATATGGTAACAAA TERM 1138 1444611 - 1444584 - H 93 -11.6 -3.51329 | opp_overlap 1444581 1444584 1444590, overlap 1444581 1444590 TAGTCGCAATCATAA TTATAATTGACT AGAT AGTCAATTATAA TTATATGGTAACAAA TERM 1139 1445008 - 1444988 - H 80 -5.5 -5.36441 | GTGGGAGAGAAAAAA GATTAATAC CAA GTAGTAATC AAAGGAATAGAGATG OTT_1408 1445029 - 1445271 + | transposase OTT_1409 1446368 - 1445505 - | putative conjugative transfer protein TraA OTT_1410 1446801 - 1446358 - | putative conjugative transfer protein TraA TERM 1140 1447129 - 1447146 + r 91 -2.7 -6.41881 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTTTATTATC OTT_1411 1447491 - 1447204 - | RelA/SpoT-related protein TERM 1141 1447993 - 1447963 - H 93 -12.1 -2.52464 | gap 1, opp_overlap 1447963 TTCCTGTTCAATTGA GCCTGATTCTCTCA GATC TGAGAGAAT-AGGC TTTTTATCTAACCTT TERM 1142 1447963 - 1447993 + H 100 -12.1 -4.98522 | gap 1, opp_overlap 1447963 TTCCTGTTCAATTGA GCCTGATTCTCTCA GATC TGAGAGAAT-AGGC TTTTTATCTAACCTT OTT_1412 1448242 - 1449012 + | putative conjugative transfer protein TraA OTT_1413 1449091 - 1449279 + | putative conjugative transfer protein TraA OTT_1414 1449656 - 1449465 - | putative integrase TERM 1143 1450475 - 1450493 + H 80 -9 -3.60151 | opp_overlap 1450472 TGTGTTTAAGTATGC TGTCTAAA GAT TTTAGACA TTATCATTTGAGGAA TERM 1144 1450552 - 1450531 - g 75 -8.1 -3.57039 | opp_overlap 1450531 1450530, overlap 1450535 GAGTTATAACGAGAA CAAATCTGC AATT GCAAATTTG GTTACTAGGGTTTAT TERM 1145 1451226 - 1451238 + G 79 -2.7 -5.73672 | TCATTTAGAACAGTA CTAGT ATT ATTAG TTTTTTTAATTGTTT TERM 1146 1451415 - 1451427 + G 72 -4.9 -4.75954 | opp_overlap 1451415 1451413 CATAAAATAACAATA TTAGA TGG TCTAA TTTATTTTGGATTTT ampG1 1450512 - 1451774 + | AmpG protein panF 1451790 - 1453193 + | sodium/pantothenate symporter OTT_1417 1453888 - 1453550 - | transposase OTT_1418 1454416 - 1453976 - | transposase TERM 1147 1454238 - 1454257 + g 80 -7.2 -4.6038 | gap 1, opp_overlap 1454238 ATTTTCCCATTATAA CCTT-TGGC TGG GCCATAAGG TTTTGCTTTAATATC OTT_1419 1454976 - 1454740 - | hypothetical protein OTT_1420 1455418 - 1455104 - | putative conjugative transfer protein TraE TERM 1148 1456253 - 1456300 + H 100 -14 -4.27686 | opp_overlap 1456259, overlap 1456254 1456259 AACGCAATTATCTTA GTAAAAGTTATTAATACAATAA ATAT TTATTGTATTAATGACTTTTAA TTTTAACTAATTTTA TERM 1149 1456254 - 1456299 + H 100 -17.5 -3.15527 | opp_overlap 1456259, overlap 1456253 1456259 ACGCAATTATCTTAG TAAAAGTTATTAATACAATAA ATAT TTATTGTATTAATGACTTTTA ATTTTAACTAATTTT TERM 1150 1456259 - 1456294 + H 100 -13 -4.68645 | opp_overlap 1456259, overlap 1456254 1456253 ATTATCTTAGTAAAA GTTATTAATACAATAA ATAT TTATTGTATTAATGAC TTTTAATTTTAACTA TERM 1151 1456294 - 1456259 - H 95 -10.8 -4.2717 | opp_overlap 1456254 1456253 1456259 ATTATCTTAGTAAAA GTTATTAATACAATAA ATAT TTATTGTATTAATGAC TTTTAATTTTAACTA TERM 1152 1456447 - 1456389 - H 84 -10.9 -2.64933 | gap 1, opp_overlap 1456392 1456392 1456394 TAGCTATGGATAGGA TTGCTGTTATTATTGTTTTAGAGATATT AAAT AATATCTCTAAAACAATAATAACTA-AG TTTGAATATTTCAGT TERM 1153 1456392 - 1456447 + H 100 -15.5 -3.81539 | gap 2, opp_overlap 1456389, overlap 1456392 1456394 CTATGGATAGGATTG C-T-GTTATTATTGTTTTAGAGATATT AAAT AATATCTCTAAAACAATAATAACTAAG TTTGAATATTTCAGT TERM 1154 1456392 - 1456446 + H 100 -15.7 -2.882 | gap 1, opp_overlap 1456389, overlap 1456392 1456394 CTATGGATAGGATTG CT-GTTATTATTGTTTTAGAGATATT AAAT AATATCTCTAAAACAATAATAACTAA GTTTGAATATTTCAG TERM 1155 1456394 - 1456443 + H 100 -24.3 -2.6836 | opp_overlap 1456389, overlap 1456392 1456392 ATGGATAGGATTGCT GTTATTATTGTTTTAGAGATATT AAAT AATATCTCTAAAACAATAATAAC TAAGTTTGAATATTT OTT_1421 1456748 - 1457047 + | hypothetical protein TERM 1156 1457192 - 1457210 + T 70 -3.2 -5.28176 | AATATTTCATTCTTC TTGATTTA GCT TAAAACAA TTTTTTCTCAATAGG OTT_1422 1457682 - 1457395 - | quinone oxidoreductase OTT_1423 1459086 - 1457941 - | quinone oxidoreductase TERM 1157 1459059 - 1459071 + g 76 -3.5 -5.38958 | opp_overlap 1459059, overlap 1459053 TACTATTACCATAAG TTATA CGG TATAA TTTTTGTTTATGCAT ccmE 1459397 - 1459789 + | cytochrome c-type biogenesis protein CcmE TERM 1158 1459815 - 1459789 - f 87 -11.2 -2.64155 | opp_overlap 1459789, overlap 1459794 GCCCCCTGAAAGCTA GTAAATATTAAT CTG ATTAATATTTAC TTTTTAAATGATAGA TERM 1159 1459789 - 1459815 + F 100 -11.2 -4.68593 | opp_overlap 1459789 1459794 GCCCCCTGAAAGCTA GTAAATATTAAT CTG ATTAATATTTAC TTTTTAAATGATAGA OTT_1425 1459823 - 1460737 + | hypothetical protein OTT_1426 1460734 - 1461207 + | putative Hollyday junction resolvase TERM 1160 1461714 - 1461695 - g 84 -10.8 -3.1505 | ACTAGTGCGTACGAA GCTTTAGC TGAA GCTAAAGC ACAACATATAGATGT TERM 1161 1462275 - 1462253 - g 77 -4.3 -5.16206 | gap 1, overlap 1462257 AAATTAATAGAAAAA GTTA-TGCTT GAAG AAGCAGTAAC TATAGCTCGTGAACA recJ 1461221 - 1462984 + | single-stranded-DNA-specific exonuclease TERM 1162 1463251 - 1463275 + T 75 -5.9 -4.70626 | opp_overlap 1463249 1463254, overlap 1463271 AAAGTGTAACCTATA TAACAATTATT GTT ATTAATTGTTA TTTTTAACATTGTTA mkl 1464048 - 1463293 - | ribonucleotide ABC transporter ATP-binding protein OTT_1429 1464943 - 1464077 - | toluene export ABC transporter permease protein OTT_1430 1465773 - 1464982 - | hypothetical protein rpsD 1465900 - 1466523 + | 30S ribosomal protein S4 OTT_1432 1466501 - 1466815 + | hypothetical protein OTT_1433 1466998 - 1467084 + | putative conjugative transfer protein TraB OTT_1434 1467309 - 1467752 + | putative conjugative transfer protein TraU OTT_1435 1467819 - 1468001 + | putative conjugative transfer protein TraN OTT_1436 1468005 - 1468358 + | putative conjugative transfer protein TraH OTT_1437 1468288 - 1468695 + | putative conjugative transfer protein TraG TERM 1163 1469181 - 1469158 - g 73 -8.2 -3.38674 | overlap 1469157 AAAAGCGCTAAAAAG GCCTCGAAAA TCCG TTTTGGAGGC TTGCCATTAGTAAAG OTT_1438 1468849 - 1470384 + | putative conjugative transfer protein TraD TERM 1164 1470372 - 1470406 + T 79 -6.7 -4.67173 | opp_overlap 1470373 1470378, overlap 1470370 1470374 CAAAAAACTTAAGTT AGTAGAGTATTAATT CGAAA AATTAATACTCTATG TTATTTTTTAAATTA TERM 1165 1470405 - 1470373 - T 70 -8.7 -2.61943 | opp_overlap 1470372 1470370 1470374, overlap 1470378 AAAAAACTTAAGTTA GTAGAGTATTAATTC GAA AAATTAATACTCTAT GTTATTTTTTAAATT TERM 1166 1470374 - 1470404 + T 95 -11.5 -3.92369 | opp_overlap 1470373 1470378, overlap 1470372 1470370 AAAAACTTAAGTTAG TAGAGTATTAATT CGAAA AATTAATACTCTA TGTTATTTTTTAAAT OTT_1439 1470855 - 1470394 - | putative transposase TERM 1167 1471526 - 1471510 - g 73 -8.1 -3.54574 | overlap 1471519 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 1168 1471672 - 1471697 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 1471672 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_1440 1471072 - 1472034 + | transposase TERM 1169 1472028 - 1472078 + T 100 -13.3 -4.84262 | opp_overlap 1472028 1472032 1472035 1472038, overlap 1472032 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1170 1472078 - 1472028 - T 100 -13.3 -2.84098 | opp_overlap 1472028 1472032, overlap 1472032 1472035 1472038 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1171 1472032 - 1472074 + T 91 -8.3 -4.91657 | opp_overlap 1472032 1472028 1472035 1472038, overlap 1472028 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1172 1472074 - 1472032 - T 80 -8.3 -4.10331 | opp_overlap 1472028 1472032, overlap 1472028 1472035 1472038 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_1441 1472610 - 1472050 - | putative transposase TERM 1173 1472259 - 1472285 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTGTAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT OTT_1442 1474224 - 1472662 - | putative conjugative transfer protein TraI OTT_1443 1475299 - 1474565 - | repeat-containing protein E_02 TERM 1174 1475110 - 1475145 + g 72 -8.5 -2.98823 | opp_overlap 1475100, overlap 1475097 1475139 1475144 CACTAGTCATGTCTG TGAC-AGCGCTAGTCAT ATCT GTGAC-AGCGCTAGTCA TGTCTGTGACAACAC OTT_1444 1478240 - 1475436 - | putative conjugative transfer protein TraA TERM 1175 1478606 - 1478578 - g 91 -5.3 -5.7946 | TCTCCAACAAAAAAA GGCTAAGCTGATC ATG GATGAGGTTAACC TTAAAATTAAAGAAC OTT_1445 1478534 - 1478989 + | putative conjugative transfer protein TraD OTT_1446 1480066 - 1479068 - | hypothetical protein OTT_1447 1480763 - 1480188 - | RelA/SpoT-related protein OTT_1448 1481721 - 1480864 - | hypothetical protein TERM 1176 1481021 - 1481031 + g 71 -5.4 -4.68724 | opp_overlap 1481019 1481021 ACCAACTCAAAATCA GCTA ATT TAGC TTTTATATTCCCTAA OTT_1449 1482471 - 1481743 - | hypothetical protein TERM 1177 1482735 - 1482715 - R 75 -5.5 -4.86862 | TCTAAAAAAGCAAAA TATCTCTCA AAA TGAGATATA CAATTGATCCTGAGT OTT_1450 1483537 - 1482821 - | hypothetical protein TERM 1178 1483895 - 1483914 + H 70 -2.2 -5.38348 | opp_overlap 1483889 1483908, overlap 1483889 1483906 1483908 AGCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT OTT_1451 1484740 - 1485036 + | N6 adenine-specific DNA-methyltransferase OTT_1452 1485552 - 1485052 - | hypothetical protein OTT_1453 1486298 - 1485654 - | ankyrin repeat-containing protein 03_11 OTT_1454 1486731 - 1486336 - | RelA/SpoT-related protein OTT_1455 1487257 - 1487646 + | transposase TERM 1179 1487741 - 1487776 + F 100 -20.8 -3.02043 | opp_overlap 1487746 1487749, overlap 1487730 1487746 1487749 AACTTCATATGTCCA TGAAAGAAGTTTCAGG TCAA CCTGAAACTTCTTTCA TGTTGGGACGAAATT TERM 1180 1487771 - 1487746 - f 100 -14.9 -3.74251 | opp_overlap 1487741 1487730 1487746 1487749, overlap 1487749 CATATGTCCATGAAA GAAGTTTCAGG TCAA CCTGAAACTTC TTTCATGTTGGGACG TERM 1181 1487746 - 1487771 + F 100 -14.9 -3.92324 | opp_overlap 1487746 1487749, overlap 1487741 1487730 1487749 CATATGTCCATGAAA GAAGTTTCAGG TCAA CCTGAAACTTC TTTCATGTTGGGACG TERM 1182 1487768 - 1487749 - f 95 -10.8 -4.0031 | opp_overlap 1487746 1487741 1487730 1487749, overlap 1487746 ATGTCCATGAAAGAA GTTTCAGG TCAA CCTGAAAC TTCTTTCATGTTGGG TERM 1183 1487749 - 1487768 + F 95 -10.8 -4.08853 | opp_overlap 1487749 1487746, overlap 1487746 1487741 1487730 ATGTCCATGAAAGAA GTTTCAGG TCAA CCTGAAAC TTCTTTCATGTTGGG TERM 1184 1488041 - 1488091 + F 100 -13.3 -4.93177 | opp_overlap 1488045 1488048 1488051 TGTTTCAATCCATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTTTTA TERM 1185 1488087 - 1488045 - f 78 -8.3 -3.99405 | opp_overlap 1488041, overlap 1488048 1488051 TCAATCCATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1186 1490154 - 1490140 - g 78 -2.2 -5.75342 | opp_overlap 1490142, overlap 1490142 TGCCTGGAAAAAAAA CATAAA AAG TTTATA TTATTGTAGATCTAC nrdA 1488476 - 1490290 + | ribonucleoside-diphosphate reductase alpha chain nrdB 1490268 - 1491347 + | ribonucleoside-diphosphate reductase beta chain TERM 1187 1492081 - 1492046 - g 87 -11.4 -3.02043 | opp_overlap 1492054 1492055, overlap 1492055 AATTTCGTCCCAACA TGAAAGAAATTTCAGG TCAA CCTGAAACTTTTTTCA TGGACATATATAGAT TERM 1188 1492054 - 1492073 + G 79 -5 -5.14965 | opp_overlap 1492046 1492055, overlap 1492055 CCCAACATGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCATGGACAT TERM 1189 1492055 - 1492072 + G 77 -8.5 -3.68256 | opp_overlap 1492046 1492055, overlap 1492054 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCATGGACA TERM 1190 1492072 - 1492055 - g 89 -8.5 -4.56883 | opp_overlap 1492055 1492054, overlap 1492046 CCAACATGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCATGGACA OTT_1458 1491796 - 1492146 + | hypothetical protein TERM 1191 1492460 - 1492437 - f 70 -3.2 -5.19212 | overlap 1492438 1492439 ATTATTACGAAAAAA CTTGCTTTTT CAAA AAAAAGCATA CAATAGATTGTTTTT OTT_1459 1492516 - 1492743 + | putative integrase abcT2 1492841 - 1494550 + | ABC transporter ATP-binding protein OTT_1461 1494519 - 1494866 + | hypothetical protein OTT_1462 1494983 - 1495195 + | hypothetical protein OTT_1463 1495824 - 1495952 + | replicative DNA helicase TERM 1192 1497079 - 1497064 - g 80 -7.6 -4.1721 | opp_overlap 1497054 ACTCAGAGCTTAAAA GCTCTT GCTA AAGAGC TCAATATTTCAATAA TERM 1193 1497174 - 1497144 - g 70 -4.1 -4.98522 | gap 1, opp_overlap 1497144 AAGGTCAGATAAAAA GCCT-ATTCTCTCA GATC TACGAGAATCAGGC TCCATTGAACAAGAT OTT_1464 1495966 - 1497420 + | replicative DNA helicase TERM 1194 1497743 - 1497780 + F 84 -9.5 -3.63627 | gap 1, opp_overlap 1497749, overlap 1497744 1497749 AGTACACTTGTCAAT TCAAAATATAAAGACTGT ACT ACAG-CTTTATATTTTGC TTTGAAATATAAGAA TERM 1195 1497744 - 1497779 + F 100 -13 -2.77962 | gap 1, opp_overlap 1497749, overlap 1497743 1497749 GTACACTTGTCAATT CAAAATATAAAGACTGT ACT ACAG-CTTTATATTTTG CTTTGAAATATAAGA TERM 1196 1497749 - 1497774 + F 78 -7.1 -4.55798 | gap 1, opp_overlap 1497749, overlap 1497744 1497743 CTTGTCAATTCAAAA TATAAAGACTGT ACT ACAG-CTTTATA TTTTGCTTTGAAATA TERM 1197 1497774 - 1497749 - f 76 -7.1 -4.27316 | gap 1, opp_overlap 1497749 1497744 1497743 CTTGTCAATTCAAAA TATAAAGACTGT ACT ACAG-CTTTATA TTTTGCTTTGAAATA OTT_1465 1497782 - 1498282 + | ankyrin repeat-containing protein 03_12 OTT_1466 1498380 - 1498883 + | hypothetical protein OTT_1467 1499696 - 1498887 - | N6 adenine-specific DNA-methyltransferase TERM 1198 1500120 - 1500100 - g 84 -5.6 -5.40873 | AACAGAAAAATAAAA GTATATTT AATAA AAATATAC AGTCAAAACTGTTAC OTT_1468 1500063 - 1500341 + | hypothetical protein TERM 1199 1500322 - 1500351 + F 71 -7.3 -3.79633 | gap 1, opp_overlap 1500318 1500322 1500325, overlap 1500320 1500325 TATGTCATATACCAA TC-AGCTTAGCTAA CTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 1200 1500347 - 1500325 - f 100 -13.6 -2.83345 | opp_overlap 1500322 1500320 1500325, overlap 1500318 1500322 GTCATATACCAATCA GCTTAGCTAA CTG TTAGCTAAGC TTGCTATTTTAAATT TERM 1201 1500325 - 1500347 + F 100 -13.6 -3.55453 | opp_overlap 1500318 1500325 1500322, overlap 1500322 1500320 GTCATATACCAATCA GCTTAGCTAA CTG TTAGCTAAGC TTGCTATTTTAAATT TERM 1202 1500391 - 1500377 - f 70 -2.9 -5.20328 | TTCTAAAAAAACAAA GTTAA TAAAC TTAAC CATAGGAGAATAATA OTT_1469 1500406 - 1500900 + | hypothetical protein OTT_1470 1500931 - 1501107 + | hypothetical protein OTT_1471 1501828 - 1501322 - | transposase OTT_1472 1502189 - 1501815 - | transposase OTT_1473 1502254 - 1502757 + | hypothetical protein TERM 1203 1502805 - 1502795 - g 70 -4 -4.95758 | ATGATATTAGAAAAA GAAT TCA ATTC AGAAATAGAAATGAA TERM 1204 1502920 - 1502903 - g 76 -7.1 -4.29905 | ACTACAGTAAAAGAA GTAATTG GTGA CAATTAC AGACTACAGGCAGTA OTT_1474 1502780 - 1503001 + | hypothetical protein OTT_1475 1502998 - 1503264 + | hypothetical protein TERM 1205 1503288 - 1503308 + F 86 -5.6 -5.40873 | GTAACAGTTTTGACT GTATATTT TTATT AAATATAC TTTTATTTTTCTGTT OTT_1476 1503712 - 1503888 + | N6 adenine-specific DNA-methyltransferase TERM 1206 1504513 - 1504496 - g 82 -2.7 -5.95946 | GGAATAATAAAAAAA TCAGTTC TAGA GAAATGA TTAAAATATTGCGTC OTT_1477 1504318 - 1504734 + | RelA/SpoT-related protein OTT_1478 1505350 - 1506078 + | ankyrin repeat-containing protein 17 OTT_1479 1506587 - 1506132 - | putative conjugative transfer protein TraD TERM 1207 1506268 - 1506290 + g 77 -7.8 -4.13767 | ATGTGGCGCTTAGTG TTTTCATCTG GTT CAGAGGAAAA TTTTAAAATCACGGC OTT_1480 1506773 - 1508752 + | putative conjugative transfer protein TraA TERM 1208 1508818 - 1508842 + T 70 -5.7 -4.3739 | AGCTTTCTATCGTGC TTGGCGGCTAT AAA ACAGTTGCCAA TTTTGTGCCGCAGTG OTT_1481 1510758 - 1508974 - | hypothetical protein TERM 1209 1511087 - 1511077 - H 82 -5.4 -5.39721 | TGAGCATAGAAAAAA GCTA CAA TAGC ATCATAAGATTTACC OTT_1482 1511405 - 1512475 + | putative conjugative transfer protein TraI TERM 1210 1512989 - 1512979 - g 74 -3.2 -5.48028 | GAAATAAAAAGAAAA GCAA CTG CTGC ACTAGTTCATTTTAT OTT_1483 1512460 - 1513488 + | putative transposase TERM 1211 1513510 - 1513476 - T 79 -6.7 -4.67173 | opp_overlap 1513477 1513482, overlap 1513473 1513478 TAATTTAAAAAATAA CATAGAGTATTAATT TTTCG AATTAATACTCTACT AACTTAAGTTTTTTG TERM 1212 1513477 - 1513509 + T 70 -8.7 -2.61943 | opp_overlap 1513476 1513473 1513478, overlap 1513482 AATTTAAAAAATAAC ATAGAGTATTAATTT TTC GAATTAATACTCTAC TAACTTAAGTTTTTT TERM 1213 1513508 - 1513478 - T 95 -11.5 -3.92369 | opp_overlap 1513477 1513482, overlap 1513476 1513473 ATTTAAAAAATAACA TAGAGTATTAATT TTTCG AATTAATACTCTA CTAACTTAAGTTTTT OTT_1484 1515252 - 1513498 - | putative conjugative transfer protein TraD TERM 1214 1514701 - 1514724 + g 73 -8.2 -3.38674 | overlap 1514700 CTTTACTAATGGCAA GCCTCCAAAA CAGA TTTTCGAGGC CTTTTTAGCGCTTTT OTT_1485 1516403 - 1515258 - | TPR repeat-containing protein 01_09 OTT_1486 1518770 - 1516419 - | putative conjugative transfer protein TraG TERM 1215 1517209 - 1517224 + g 74 -6.2 -4.3586 | opp_overlap 1517197 1517194, overlap 1517206 CCAGCTCCAGCACTA GTACTA GTAC TAGTAC TTTTACTGTAGCTAC TERM 1216 1517960 - 1517905 - G 76 -8.6 -3.49653 | gap 1, opp_overlap 1517905, overlap 1517922 ATCATTCCTAGACAA TGGATTATTGTAAAAAATACTGGCCAG CTG CTGACCCATATTATTAACAA-AATCCA TGTTTTGAGTATGTT TERM 1217 1517944 - 1517922 - G 75 -4.8 -5.06451 | opp_overlap 1517905, overlap 1517905 GATTATTGTAAAAAA TACTGGCCAG CTG CTGACCCATA TTATTAACAAAATCC TERM 1218 1518753 - 1518742 - G 72 -5.8 -4.41422 | TTAGATACAAAATAA CTCG TTTG CGAG GAAAGAGAAGCAAAC TERM 1219 1518859 - 1518809 - R 100 -13.3 -4.84262 | opp_overlap 1518809 1518813 1518816 1518819, overlap 1518813 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 1220 1518809 - 1518859 + r 100 -13.3 -2.84098 | opp_overlap 1518809 1518813, overlap 1518813 1518816 1518819 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 1221 1518855 - 1518813 - R 91 -8.3 -4.91657 | opp_overlap 1518809 1518813 1518816 1518819, overlap 1518809 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 1222 1518813 - 1518855 + r 80 -8.3 -4.10331 | opp_overlap 1518813 1518809, overlap 1518809 1518816 1518819 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_1487 1519815 - 1518853 - | transposase TERM 1223 1519215 - 1519190 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 1519190 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 1224 1519361 - 1519377 + g 73 -8.1 -3.54574 | overlap 1519358 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_1488 1520327 - 1519992 - | putative conjugative transfer protein TraG OTT_1489 1520812 - 1520327 - | putative conjugative transfer protein TraH OTT_1490 1521630 - 1521001 - | putative conjugative transfer protein TraH OTT_1491 1522325 - 1521627 - | putative conjugative transfer protein TraF OTT_1492 1522957 - 1522322 - | putative conjugative transfer protein TraN OTT_1493 1524013 - 1523246 - | putative conjugative transfer protein TraN OTT_1494 1524393 - 1524010 - | putative conjugative transfer protein TrbC OTT_1495 1525003 - 1524416 - | putative conjugative transfer protein TraU OTT_1497 1527938 - 1526067 - | putative conjugative transfer protein TraC OTT_1496 1525158 - 1526168 + | ankyrin repeat-containing protein 06_03 OTT_1498 1528179 - 1527850 - | hypothetical protein OTT_1499 1528448 - 1528179 - | putative conjugative transfer protein TraB OTT_1500 1529229 - 1528411 - | putative conjugative transfer protein TraB OTT_1501 1529877 - 1529548 - | hypothetical protein OTT_1502 1530718 - 1530242 - | hypothetical protein OTT_1503 1531266 - 1530715 - | putative conjugative transfer protein TraE OTT_1504 1531601 - 1531266 - | hypothetical protein TERM 1225 1531682 - 1531700 + r 88 -10.3 -3.38812 | opp_overlap 1531677, overlap 1531681 TTTACATACATGCAT GTGCGAC ATGAA GTCGCAC TATTCTTACCACAAC OTT_1505 1532173 - 1531727 - | putative integrase OTT_1506 1532773 - 1532198 - | putative integrase TERM 1226 1532330 - 1532342 + g 74 -6.3 -4.45115 | overlap 1532321 1532327 TTTATGCTGCTCTAT TCCTA GAG TAGGA TTGTTTTCTATTAAT OTT_1507 1533837 - 1533355 - | transposase OTT_1508 1535111 - 1533945 - | hypothetical protein OTT_1509 1536386 - 1535130 - | ankyrin repeat-containing protein 07_02 OTT_1510 1539654 - 1538557 - | putative N-acetylmuramoyl-L-alanine amidase OTT_1511 1540330 - 1542075 + | repeat-containing protein G OTT_1512 1543127 - 1543243 + | transposase TERM 1227 1543419 - 1543403 - g 71 -2.3 -5.38951 | overlap 1543410 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA OTT_1513 1543255 - 1543497 + | transposase OTT_1514 1544527 - 1544640 + | putative integrase OTT_1515 1545218 - 1546111 + | putative lipase LipB TERM 1228 1546432 - 1546446 + T 70 -2.9 -5.19328 | opp_overlap 1546432 ATCTTAATTCAGAAC TATGT ATCTA ACATA TTTTTCTTATAAAAT TERM 1229 1546637 - 1546649 + T 70 -6.3 -4.21945 | TTTATGTTTATCTAT TCCTA GTG TAGGA TTTCTGTCTATTAAT OTT_1516 1546940 - 1546680 - | putative integrase TERM 1230 1548382 - 1548354 - R 93 -11.3 -3.58518 | opp_overlap 1548353 1548352 1548357 1548362, overlap 1548352 1548357 1548362 AATAGCAAGTAAATA CAAGAAAATTATA GCT TATAATCTTCTTG CCTTGTTTGGCTAAA TERM 1231 1548379 - 1548357 - R 72 -7.2 -3.90901 | opp_overlap 1548357 1548353 1548352 1548362, overlap 1548354 1548352 1548362 AGCAAGTAAATACAA GAAAATTATA GCT TATAATCTTC TTGCCTTGTTTGGCT OTT_1517 1548555 - 1548337 - | reverse transcriptase TERM 1232 1548857 - 1548845 - R 70 -4.9 -4.63218 | CTGGTGTTAATAAAA TAACT ATT AGTTA AATTACAAATAAAGC OTT_1518 1549132 - 1548914 - | ankyrin repeat-containing protein 18 OTT_1519 1549852 - 1549361 - | ankyrin repeat-containing protein 19 OTT_1520 1550709 - 1550311 - | putative conjugative transfer protein TraI TERM 1233 1550725 - 1550758 + H 80 -8.5 -3.90298 | overlap 1550732 ATTTTTTAATTTACT CAGAAAATAAGTATT GCTA AATATTTATTTTTTG TTATATTTACTTAAG TERM 1234 1550732 - 1550751 + H 77 -3 -5.66338 | overlap 1550725 AATTTACTCAGAAAA TAAGTATT GCTA AATATTTA TTTTTTGTTATATTT TERM 1235 1551079 - 1551066 - g 75 -2.5 -5.55769 | CTCTATAAGAAAAAA TATTA CAGC TAATA ATGAGGATATTTCTA OTT_1521 1550821 - 1551489 + | hypothetical protein OTT_1522 1552484 - 1551687 - | putative conjugative transfer protein TraA TERM 1236 1552078 - 1552108 + g 76 -6.3 -4.61162 | GCTTTTCCTTCTGCA GACAAAATGGTTA CATCA TAATCATATTGTC TTTGTTCTTTGATGT OTT_1523 1553641 - 1552499 - | putative conjugative transfer protein TraA OTT_1524 1553843 - 1553709 - | putative conjugative transfer protein TraA OTT_1525 1554140 - 1554604 + | putative conjugative transfer protein TraD OTT_1526 1556173 - 1554608 - | hypothetical protein TERM 1237 1554713 - 1554703 - G 71 -6.8 -4.0162 | TTGCTATACTAGAAA CAGC CAG GCTG CAATCACTTACATCT OTT_1527 1557215 - 1556883 - | replicative DNA helicase TERM 1238 1557129 - 1557159 + g 95 -8.5 -4.98522 | gap 1, opp_overlap 1557129 GTCTTGTTCAATTGA GCCTGATTCTTTCA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT OTT_1528 1558121 - 1557279 - | hypothetical protein TERM 1239 1557475 - 1557491 + g 72 -7.3 -3.80858 | opp_overlap 1557471 1557475 ACTTTGAACAATATA GAGTTAG ATC CTAGCTC TTTACTAAGTTCTGA TERM 1240 1558054 - 1558068 + g 74 -8.6 -3.25459 | opp_overlap 1558051 1558047, overlap 1558052 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGCGTTAGT OTT_1529 1558480 - 1558097 - | hypothetical protein OTT_1530 1558960 - 1559202 + | transposase OTT_1531 1559281 - 1559457 + | transposase OTT_1532 1559621 - 1559806 + | transposase OTT_1533 1561383 - 1560448 - | reverse transcriptase TERM 1241 1562090 - 1562074 - g 73 -8.1 -3.54574 | overlap 1562083 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 1242 1562236 - 1562261 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 1562236 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_1534 1561630 - 1562598 + | transposase TERM 1243 1562642 - 1562592 - Tf 100 -13.3 -2.84098 | opp_overlap 1562592 1562596, overlap 1562596 1562599 1562602 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1244 1562592 - 1562642 + TF 100 -13.3 -4.84262 | opp_overlap 1562592 1562596 1562599 1562602, overlap 1562596 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1245 1562596 - 1562638 + TF 91 -8.3 -4.91657 | opp_overlap 1562592 1562596 1562599 1562602, overlap 1562592 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1246 1562638 - 1562596 - Tf 80 -8.3 -4.10331 | opp_overlap 1562596 1562592, overlap 1562592 1562599 1562602 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_1535 1562832 - 1562614 - | reverse transcriptase OTT_1536 1562816 - 1563256 + | hypothetical protein OTT_1537 1564679 - 1563657 - | putative integrase TERM 1247 1564038 - 1564050 + g 74 -6.3 -4.45115 | overlap 1564029 1564035 TTTATGCTGCTCTAT TCCTA GAG TAGGA TTGTTTTCTATTAAT TERM 1248 1564760 - 1564771 + r 70 -3 -5.33785 | ATAAATTATGCTTTT TTTG ATAT CAAA TTTTTTATACTAATT TERM 1249 1565034 - 1565049 + r 72 -4.8 -4.95167 | opp_overlap 1565034 CTATAAAGTGTAGAA GTTAAT AAAA ATTAAC TTTTCTTCTTCCTTA OTT_1538 1565368 - 1565138 - | transposase TERM 1250 1566245 - 1566277 + r 86 -10.1 -3.60234 | opp_overlap 1566245 TTCATTGCAAAAGCA GTTGTAAAGATAGAA TTT TGCTATTTTTACAAC TTTAGCACTATGTAC OTT_1539 1567200 - 1566412 - | hypothetical protein OTT_1540 1568227 - 1568376 + | hypothetical protein OTT_1541 1568941 - 1570080 + | reverse transcriptase TERM 1251 1571471 - 1571436 - g 100 -14.4 -5.10064 | gap 1, opp_overlap 1571436 TGTAACACACAAAAA GCAGTATTATATGAGAT ATA ATC-CATATAATACTGC TTTTAAACAATATTT TERM 1252 1571436 - 1571471 + G 100 -14.4 -4.11773 | gap 1, opp_overlap 1571436 TGTAACACACAAAAA GCAGTATTATATGAGAT ATA ATC-CATATAATACTGC TTTTAAACAATATTT TERM 1253 1571533 - 1571513 - g 71 -7 -4.0641 | opp_overlap 1571507 1571512 1571515 GTTCATGTATAGAAA GATCTAAT TATAG ATTAGATC ATAGATTAGTATCAT phrB 1570996 - 1572513 + | deoxyribodipyrimidine photolyase, DNA photolyase trxB1 1573496 - 1572534 - | thioredoxin reductase OTT_1544 1574549 - 1573626 - | hypothetical protein tolB 1576086 - 1574725 - | TolB protein precursor pdhD 1577847 - 1576420 - | dihydrolipoamide dehydrogenase precursor TERM 1254 1576696 - 1576684 - G 76 -6.3 -4.68994 | ACTATTAGCTAAAAA TGGAA ATT TTCCA ACAACATATTGAATA bioC 1578742 - 1577939 - | hypothetical protein TERM 1255 1579457 - 1579439 - g 78 -6.8 -4.46212 | opp_overlap 1579439 1579442 CGCTGGATTACAAAA TAATGCTA GTA TAGCATCA TCTTCAGCTAGTGTA OTT_1548 1578918 - 1579526 + | 22kDa antigen TERM 1256 1579629 - 1579597 - T 82 -4.3 -5.62045 | opp_overlap 1579597 1579601 AGATATAAGAAAAAA TTAAGTTTAAAGTTA AAA TAACTTGCAACTCAA TTAATCTAGTAGATA OTT_1549 1580365 - 1579697 - | putative conjugative transfer protein TraA OTT_1550 1580795 - 1580343 - | putative conjugative transfer protein TraA OTT_1551 1580905 - 1581144 + | transposase TERM 1257 1581138 - 1581188 + F 100 -13.3 -4.84262 | opp_overlap 1581142 1581145 1581148, overlap 1581142 TGTTTCAATACTTCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1258 1581142 - 1581184 + F 91 -8.3 -4.91657 | opp_overlap 1581142 1581145 1581148, overlap 1581138 TCAATACTTCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1259 1581184 - 1581142 - f 78 -8.3 -3.92602 | opp_overlap 1581142 1581138, overlap 1581145 1581148 TCAATACTTCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1260 1581398 - 1581376 - g 77 -7.8 -4.13767 | GCTGTGATTTTAAAA TTTTCCTCTG AAC CAGATGAAAA CACTAAGCGCCACAT OTT_1552 1581364 - 1581534 + | putative conjugative transfer protein TraD OTT_1553 1582480 - 1581602 - | hypothetical protein OTT_1554 1582811 - 1582650 - | RelA/SpoT-related protein TERM 1261 1583467 - 1583449 - g 70 -4.6 -4.82901 | overlap 1583451 TCCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 1262 1583538 - 1583557 + G 75 -5 -5.00884 | opp_overlap 1583539, overlap 1583539 CCCAACCTGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 1263 1583539 - 1583556 + G 77 -8.5 -3.60048 | opp_overlap 1583539, overlap 1583538 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1264 1583556 - 1583539 - g 88 -8.5 -4.46233 | opp_overlap 1583539 1583538 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1265 1583606 - 1583592 - g 84 -3.6 -5.77988 | AGATATATAAAAAAA TCTAAA AGA TCTAGA TCTACTGAAGGTGAG TERM 1266 1583686 - 1583660 - g 76 -5.4 -4.96523 | opp_overlap 1583660 1583663, overlap 1583655 AAATGAAGAACAAAA TTTTCAAAAT GTTGATG ATTTTGAAAA TGATATACAGACTTC OTT_1555 1583064 - 1584155 + | hypothetical protein OTT_1556 1584274 - 1585272 + | hypothetical protein OTT_1557 1585743 - 1585345 - | putative conjugative transfer protein TraD TERM 1267 1586000 - 1586050 + r 100 -13.3 -2.84098 | opp_overlap 1586000 1586004, overlap 1586004 1586007 1586010 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 1268 1586050 - 1586000 - R 100 -13.3 -4.84262 | opp_overlap 1586000 1586004 1586007 1586010, overlap 1586004 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 1269 1586004 - 1586046 + r 80 -8.3 -4.10331 | opp_overlap 1586000 1586004, overlap 1586000 1586007 1586010 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 1270 1586046 - 1586004 - R 91 -8.3 -4.91657 | opp_overlap 1586004 1586000 1586007 1586010, overlap 1586000 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_1558 1587012 - 1586044 - | transposase TERM 1271 1586406 - 1586381 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 1586381 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 1272 1586552 - 1586568 + g 73 -8.1 -3.54574 | overlap 1586549 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_1559 1587518 - 1587183 - | putative conjugative transfer protein TraG OTT_1560 1587997 - 1587518 - | putative conjugative transfer protein TraH OTT_1561 1588821 - 1588192 - | putative conjugative transfer protein TraH OTT_1562 1588949 - 1588818 - | putative conjugative transfer protein TraF OTT_1563 1590373 - 1589234 - | reverse transcriptase OTT_1564 1590357 - 1590656 + | hypothetical protein TERM 1273 1591139 - 1591106 - TR 77 -7.7 -4.18668 | opp_overlap 1591102 1591105 1591101, overlap 1591101 1591107 GGAAAAAATATTAAA CTGTTTATTACATTT CATG AAGTGTAATAAACAA GATAATCTATAAATT TERM 1274 1591138 - 1591107 - TR 76 -9 -3.09574 | opp_overlap 1591102 1591105 1591101, overlap 1591106 1591101 GAAAAAATATTAAAC TGTTTATTACATTT CATG AAGTGTAATAAACA AGATAATCTATAAAT OTT_1565 1592982 - 1591183 - | hypothetical protein TERM 1275 1591683 - 1591699 + g 81 -3 -5.82388 | TTGCTTTAGCTATTT CTTTCA TATTT TGAAGG TTTTTTTTCAGATTT TERM 1276 1592506 - 1592478 - G 84 -6.2 -5.18726 | gap 1, opp_overlap 1592478 1592480 TCTTTAGAAGAAAAA TATTGCCACTAGA CTTT TC-AGTAGCAATA TATCCTGCAGAAACA OTT_1566 1593878 - 1593495 - | transposase TERM 1277 1593549 - 1593565 + g 71 -2.3 -5.38951 | overlap 1593546 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT virD4 1595867 - 1594095 - | type IV secretion system protein VirD4 TERM 1278 1594766 - 1594780 + g 86 -2.1 -6.4275 | TATCAGGTGTTAAGC CAACG TATAT TGTTG TTTTTTTTCTTTTTA virB11 1596856 - 1595867 - | type IV secretion system protein VirB11 TERM 1279 1596387 - 1596407 + g 74 -5.5 -4.8384 | overlap 1596399 ATATTTTTTTTGGAC TTTATTGCA TGC TGCAAAAAA TTTTTGAATTGTTTA virB10 1598385 - 1596856 - | type IV secretion system protein VirB10 virB9 1598822 - 1598385 - | type IV secretion system protein VirB9 virB8 1599486 - 1598806 - | type IV secretion system protein VirB8 TERM 1280 1598895 - 1598883 - G 77 -7.7 -3.96327 | opp_overlap 1598882 1598883 ATTCTTCAGGAGAAA GTTCC ATA GGAAC ATATTGATACTGTAC dnaN 1601023 - 1599725 - | DNA polymerase III beta chain TERM 1281 1600071 - 1600090 + g 79 -6.6 -4.62336 | opp_overlap 1600071 GCATGATGATCTAAA TCTAAAAT AACT ATTTTAGA TTTTTCAACTGCGAT dnaA 1602454 - 1601042 - | chromosomal replication initiator protein DnaA TERM 1282 1601491 - 1601518 + g 82 -9.8 -3.60805 | ACTCTAATACTTTTA GCGGAACTGCTG TAGC CAGCTGTTCCAC TTTGGACTGCAGTAT TERM 1283 1602580 - 1602602 + H 73 -2.9 -5.5208 | gap 1, overlap 1602571 TTCTATTAATTTAAT TACTTTATGT AGTA ACA-AAAGTA TTTTTTATATTATCA OTT_1574 1602755 - 1603063 + | hypothetical protein TERM 1284 1603528 - 1603549 + G 72 -6 -4.4959 | overlap 1603537 ATTACATTGTTATAG GTTTATAC GCAACA GTATAAAC TTTTGGTTAATTAGA TERM 1285 1604687 - 1604632 - g 100 -14 -4.11692 | gap 1, opp_overlap 1604642 1604647, overlap 1604638 CACCTATGTCGAAAA TCACAATGTATATAACTTATATTATTT ACC AAATAATATAAGTTATATACAA-ATGA AATATGTTAATCATC TERM 1286 1604682 - 1604638 - g 100 -20.7 -3.68359 | opp_overlap 1604642 1604647, overlap 1604632 TGTCGAAAATCACAA TGTATATAACTTATATTATTT ACC AAATAATATAAGTTATATACA AATGAAATATGTTAA TERM 1287 1604647 - 1604673 + G 87 -11.2 -3.49475 | opp_overlap 1604638 1604632, overlap 1604642 TCACAATGTATATAA CTTATATTATTT ACC AAATAATATAAG TTATATACAAATGAA OTT_1575 1603487 - 1605013 + | ankyrin repeat-containing protein 20 TERM 1288 1605698 - 1605708 + T 71 -2.6 -5.42164 | TAAATAGTGCTGCAG TTTT ATT AAAA TTTTTCTTATTTCTA OTT_1576 1606562 - 1606140 - | hypothetical protein TERM 1289 1607875 - 1607889 + G 77 -8.6 -3.61517 | ATACTGGCAAACCTC CAGATG AAC CATCTG TTATTGGCGAAGCAT ubiD 1606893 - 1608386 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase pbpA1 1610260 - 1608509 - | penicillin-binding protein PbpA1 TERM 1290 1609894 - 1609905 + g 81 -3 -5.9003 | CTTCATAAAGATTTT TACT AGTA AGTA TTTTTTTGTTAATTT TERM 1291 1610107 - 1610121 + g 70 -4.4 -4.82128 | CAATATTAATCCTAT TTTTAT CTG ATAAAA TTTTATATTTACTAG OTT_1579 1610735 - 1610250 - | hypothetical protein rodA 1611874 - 1610741 - | rod shape-determining protein RodA OTT_1581 1612467 - 1612045 - | hypothetical protein TERM 1292 1612245 - 1612275 + g 71 -9.2 -2.53911 | opp_overlap 1612245 1612246 1612252, overlap 1612252 AATCAAAATGATAAA TTGCAAAGGTATCA GCC TGATATCTTTGTAG TACATTAAAAGTTGG mpg 1613019 - 1612483 - | DNA-3-methyladenine glycosidase ftsH 1614937 - 1613054 - | FtsH protein TERM 1293 1613614 - 1613595 - G 71 -8.6 -2.83012 | AACCTCATTACCATA CCTAGAGA AGAT CCTCTAGG CACAATTGTTACTTT mesJ 1616279 - 1614954 - | MesJ protein TERM 1294 1615161 - 1615171 + g 81 -3.2 -5.82316 | ATATGATTTAATTAA GTGA TAG TCGC TTTTTTTTAAATAAT TERM 1295 1615715 - 1615743 + g 73 -8.4 -3.54771 | opp_overlap 1615717 1615722, overlap 1615710 1615722 GATACTTATTTGAAC TATTAGATGGAT CATTT ATCCATTTAATA TTCTGCTGTTCTAAA TERM 1296 1616521 - 1616541 + r 78 -8.4 -3.84587 | opp_overlap 1616499 1616519, overlap 1616499 CTTTACTAAGCCATA GGGTTTAA TAGCT TTAAACCC TTCTGTTTGCATACT nuoN1 1618044 - 1616605 - | NADH dehydrogenase I chain N TERM 1297 1617071 - 1617089 + g 83 -10.4 -3.03124 | opp_overlap 1617066 1617088 AAATATGATATTTCT GCTCTAAT AAC ATTAGAGC TGTTAGCAACTAAAG nuoM 1619588 - 1618089 - | NADH dehydrogenase I chain M TERM 1298 1618203 - 1618189 - G 87 -10 -3.80014 | opp_overlap 1618189, overlap 1618177 ATAGCTACTATTAAA GGTAGC ACA GCTACC TTTTCACTTAATGAA TERM 1299 1618189 - 1618203 + g 93 -10 -4.30014 | opp_overlap 1618177 1618189 ATAGCTACTATTAAA GGTAGC ACA GCTACC TTTTCACTTAATGAA TERM 1300 1618633 - 1618655 + g 84 -3.5 -5.77988 | opp_overlap 1618633 ACATACCCCATATGA GCAATTG AAGAATAAG CAATTGC TTTTTTTATATCTAT nuoL1 1621496 - 1619589 - | NADH dehydrogenase I chain L TERM 1301 1620317 - 1620307 - G 71 -5.4 -4.63542 | overlap 1620297 TAGAATCCTGAAAAA GGAA ATA TTCC AACAATTGCTAATGT TERM 1302 1620952 - 1620938 - G 76 -7.2 -4.16837 | TACAATTATAAATAA TAGCAA TAA TTGCTA AAAGAAACGCACAGT TERM 1303 1620997 - 1621019 + g 95 -9.2 -5.24129 | overlap 1620999 ACAATAAATGCTTTA TATGCTGCAA TTG TTGCGGCATG TTTTTTATGCCAAAA TERM 1304 1620999 - 1621017 + g 90 -9.6 -4.25873 | overlap 1620997 AATAAATGCTTTATA TGCTGCAA TTG TTGCGGCA TGTTTTTTATGCCAA nuoK 1621823 - 1621500 - | NADH dehydrogenase I chain K nuoJ 1622415 - 1621807 - | NADH dehydrogenase I chain J nuoI 1622904 - 1622419 - | NADH dehydrogenase I chain I nuoH 1624001 - 1622958 - | NADH dehydrogenase I chain H TERM 1305 1623831 - 1623810 - G 72 -7.3 -3.85389 | gap 1 CTGTAACAATCCAAA TGGGCC-AGC CAA ACTAGGCCCA ACACGTAATTGCATA nuoG 1626097 - 1624058 - | NADH dehydrogenase I chain G rrf 1626377 - 1626940 + | ribosome recycling factor TERM 1306 1627103 - 1627144 + T 100 -14.9 -4.25104 | opp_overlap 1627103 1627108 TATTTTATCAAGGTA TTAAATTTTAATGAAGGTG TTGT TGCCTTCATTAAAATTTAA TTTTAATACCAAGAA TERM 1307 1627144 - 1627103 - T 100 -13.5 -2.56914 | opp_overlap 1627103, overlap 1627108 TATTTTATCAAGGTA TTAAATTTTAATGAAGG TGTTGTTG CCTTCATTAAAATTTAA TTTTAATACCAAGAA TERM 1308 1627139 - 1627108 - T 82 -9 -3.80114 | opp_overlap 1627103, overlap 1627103 TATCAAGGTATTAAA TTTTAATGAAGG TGTTGTTG CCTTCATTAAAA TTTAATTTTAATACC OTT_1594 1628414 - 1627134 - | hypothetical protein TERM 1309 1628134 - 1628150 + g 73 -8.1 -3.54543 | CCTTTAGCTTTTGTA GTAGTAT GCA ATACTAC TTTACCACCGTAACT TERM 1310 1628683 - 1628666 - H 76 -7.1 -4.29432 | TAAACTTCAGCAAAA TTGCTAT AAAT ATAGCAA AAAGGATATGGTGTA dcd 1629009 - 1629575 + | deoxycytidine triphosphate deaminase secB 1629617 - 1630111 + | protein-export protein SecB OTT_1597 1631109 - 1632308 + | putative integrase OTT_1598 1632429 - 1632764 + | hypothetical protein OTT_1599 1632764 - 1633315 + | putative conjugative transfer protein TraE OTT_1600 1633312 - 1633614 + | hypothetical protein OTT_1601 1633614 - 1633718 + | hypothetical protein OTT_1602 1633818 - 1634924 + | putative conjugative transfer protein TraB TERM 1311 1635146 - 1635158 + F 75 -3.4 -5.46657 | TAGCATAGTTGTTTA GCTA TAAAT TAGC TTTTTTGTTAACATA OTT_1603 1635195 - 1636010 + | hypothetical protein OTT_1604 1636306 - 1636061 - | transposase OTT_1605 1636695 - 1637378 + | putative conjugative transfer protein TraU OTT_1606 1637463 - 1637783 + | putative conjugative transfer protein TrbC OTT_1607 1637780 - 1639471 + | putative conjugative transfer protein TraN OTT_1608 1639468 - 1640094 + | putative conjugative transfer protein TraF OTT_1609 1640170 - 1641063 + | putative conjugative transfer protein TraH OTT_1610 1641077 - 1641247 + | putative conjugative transfer protein TraH OTT_1611 1641228 - 1641572 + | putative conjugative transfer protein TraD TERM 1312 1641618 - 1641595 - g 73 -8.2 -3.38674 | overlap 1641594 AAAAGCGCTAAAAAG GCCTCAAAAA TCTG TTTTGGAGGC TTGCCATTAGTAAAG OTT_1612 1641574 - 1641747 + | putative conjugative transfer protein TraD OTT_1613 1641810 - 1642820 + | putative conjugative transfer protein TraD TERM 1313 1642806 - 1642844 + T 82 -6.3 -5.17576 | opp_overlap 1642805 1642809 1642814, overlap 1642809 1642810 CTCAAAAAACTTAAG TTAGTAGAGTATTAATT CGAAA AATTAATACTCTAGTTA TTTTTTAAATTAATC TERM 1314 1642809 - 1642841 + T 87 -8 -4.67173 | opp_overlap 1642809 1642805 1642814, overlap 1642806 1642810 AAAAAACTTAAGTTA GTAGAGTATTAATT CGAAA AATTAATACTCTAG TTATTTTTTAAATTA TERM 1315 1642841 - 1642809 - T 70 -8.7 -2.61943 | opp_overlap 1642806 1642809 1642810, overlap 1642805 1642814 AAAAAACTTAAGTTA GTAGAGTATTAATTC GAA AAATTAATACTCTAG TTATTTTTTAAATTA TERM 1316 1642810 - 1642840 + T 93 -11.5 -3.38677 | opp_overlap 1642809 1642805 1642814, overlap 1642809 1642806 AAAAACTTAAGTTAG TAGAGTATTAATT CGAAA AATTAATACTCTA GTTATTTTTTAAATT OTT_1614 1643377 - 1642838 - | putative transposase TERM 1317 1643370 - 1643383 + g 71 -5.3 -4.72986 | ATTAATAAGTATTCA GAATC CATC GATTC TTTTTAATGGCAGTA dapD 1644320 - 1643433 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 1318 1644453 - 1644441 - g 72 -3.5 -5.29445 | GCCTAATAATAAAAA TTTAA GTT TTAAA AATATAAGAAAAATC OTT_1616 1644385 - 1645029 + | hypothetical protein OTT_1617 1646106 - 1646525 + | hypothetical protein TERM 1319 1646573 - 1646563 - g 70 -4 -4.95758 | ATGATATTAGAAAAA GAAT TCA ATTC AGAAATAGAAATGAA TERM 1320 1646688 - 1646671 - g 79 -7.1 -4.5028 | AGTACAACAAAAGAA GTAATTG GTGA CAATTAC AGACTACAGGCAGTA OTT_1618 1646548 - 1646952 + | hypothetical protein TERM 1321 1647490 - 1647473 - g 79 -2.7 -5.88565 | TGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTAAAATATTGCGTC OTT_1619 1646968 - 1647711 + | RelA/SpoT-related protein OTT_1620 1648523 - 1648164 - | TPR repeat-containing protein 06_02 OTT_1621 1649025 - 1648894 - | hypothetical protein TERM 1322 1649213 - 1649231 + r 88 -10.3 -3.38812 | opp_overlap 1649208, overlap 1649212 TTTACATACATGCAT GTGCGAC ATGAA GTCGCAC TATTCTTACCACAAC OTT_1622 1649810 - 1649268 - | putative integrase OTT_1623 1650797 - 1650552 - | hypothetical protein rnhB 1651980 - 1651363 - | ribonuclease HII TERM 1323 1652751 - 1652741 - g 79 -2.6 -5.87688 | ACAATGTAAAAAAAA TAAT ATT ATTA CCAGATAGGCAGCTT miaA 1652050 - 1653087 + | tRNA delta(2)-isopentenylpyrophosphate transferase OTT_1626 1653071 - 1653817 + | hypothetical protein TERM 1324 1654428 - 1654440 + G 71 -7.7 -3.49951 | opp_overlap 1654427 1654428 TAGTTTTAATGAAAG CGTTC TCT GAACG TTCTCTGAAAGTATC hda 1653947 - 1654597 + | DnaA homologue Had protein lon 1657033 - 1654661 - | ATP-dependent protease La tdcB 1657150 - 1658163 + | threonine dehydratase OTT_1630 1660596 - 1658728 - | hypothetical protein TERM 1325 1660089 - 1660075 - G 72 -5.8 -4.37092 | opp_overlap 1660075 ATCTTTTTTATAAAA TTTCTT TAA AAGAAA TGTATGACCGCTTGA OTT_1631 1662918 - 1661149 - | repeat-containing protein A_05 TERM 1326 1662975 - 1663014 + H 70 -2.3 -5.44119 | opp_overlap 1662977, overlap 1662976 1662977 ACGTCTTTTGATAAA AAGCATGATATACATTA ATTGAG TAATATATATCATGCCA TTTTTTTAAAATCAA TERM 1327 1663012 - 1662977 - H 100 -11.5 -4.82901 | opp_overlap 1662977 1662976 1662975 GTCTTTTGATAAAAA GCATGATATACATTA ATTGAG TAATATATATCATGC CATTTTTTTAAAATC TERM 1328 1662977 - 1663012 + H 77 -9.3 -2.90726 | opp_overlap 1662977, overlap 1662976 1662975 GTCTTTTGATAAAAA GCATGATATACATTA ATTGAG TAATATATATCATGC CATTTTTTTAAAATC OTT_1632 1663297 - 1663653 + | transposase OTT_1633 1663875 - 1664249 + | transposase OTT_1634 1664236 - 1664370 + | transposase OTT_1635 1664427 - 1664801 + | transposase OTT_1636 1664788 - 1665294 + | transposase TERM 1329 1665349 - 1665333 - T 70 -2.3 -5.4251 | GCTATATACAAAAAA TTCACAA CAA TTCTGAA TTACCAAAGAAAAAT TERM 1330 1665780 - 1665796 + T 76 -4.5 -5.27206 | TCTCTTCTTTTTTGA CTTTAGA TGT TTTAAAG TTTTTCTTATATGTA proP3 1667438 - 1666218 - | proline/betaine transporter TERM 1331 1666325 - 1666283 - G 74 -6.4 -4.50841 | opp_overlap 1666291, overlap 1666314 ATAATAAGATTAAAA TCAGCATTGGCAAAAAATTA GCC TTATTATATGCTAATGCTGA CATAGCACATATTTG TERM 1332 1666727 - 1666711 - G 88 -6.7 -5.14477 | TATACAGGGAAAAAA TATAGTT GAA AACTATA AATAGCACCAATACA TERM 1333 1667560 - 1667546 - R 70 -5.8 -4.29953 | AAACTACCAAAATAA TTACTT TTG AAGTAA AAAATAAACCATGAT hemC 1668646 - 1667750 - | porphobilinogen deaminase icd 1668819 - 1670378 + | isocitrate dehydrogenase TERM 1334 1671401 - 1671366 - f 71 -7.2 -3.81339 | opp_overlap 1671368, overlap 1671390 TATTGACAATGCAAA TATATTATATCACTAA TTAA TAAGTAATATAATATA TTAAAAAAAGATTTA TERM 1335 1672798 - 1672818 + G 79 -8.5 -3.79251 | GCTGGTATTGCTACT GTATTTATT TGG AATAAATAC TTTAATGCTGCACTG OTT_1640 1671520 - 1674954 + | sensor histidine kinase/response regulator/transporter hybrid protein OTT_1641 1675348 - 1675145 - | putative transposase OTT_1642 1676518 - 1675400 - | putative conjugative transfer protein TraI OTT_1643 1677626 - 1676802 - | putative conjugative transfer protein TraA OTT_1644 1678564 - 1677641 - | putative conjugative transfer protein TraA OTT_1645 1679622 - 1678606 - | putative conjugative transfer protein TraA OTT_1646 1679900 - 1680355 + | putative conjugative transfer protein TraD OTT_1647 1680713 - 1680414 - | hypothetical protein OTT_1648 1681336 - 1680944 - | hypothetical protein OTT_1649 1682362 - 1681748 - | RelA/SpoT-related protein TERM 1336 1681969 - 1681986 + g 82 -2.7 -6.01369 | GACGCAATATTTTAA TCATTTC TCTA GAACTGA TTTTTTTATTATTTC OTT_1650 1683041 - 1682646 - | transposase TERM 1337 1682840 - 1682824 - G 73 -8.1 -3.46081 | opp_overlap 1682823 1682824 GACTCAATTAAGGAA CGTTTAT TTA ATAAACG CTTATCATCTATGTC OTT_1651 1683507 - 1683136 - | transposase OTT_1652 1683949 - 1684284 + | hypothetical protein OTT_1653 1684284 - 1684700 + | putative conjugative transfer protein TraE OTT_1654 1684642 - 1684818 + | RelA/SpoT-related protein TERM 1338 1684811 - 1684840 + F 74 -8.7 -3.30214 | opp_overlap 1684819 ACTGTGAGCTTTATG CTACCTAATAAAC TAAA GTTTAATAGGTGG TTAATGTAGTGAATT OTT_1655 1684940 - 1685866 + | hypothetical protein OTT_1656 1687052 - 1686162 - | hypothetical protein TERM 1339 1686730 - 1686744 + g 84 -10 -3.4745 | TCTGCTGTTGTTGTG GCAAGC TTA GCTTGC TTGTAATGCGTTTTT OTT_1657 1688467 - 1687328 - | reverse transcriptase OTT_1658 1688451 - 1688777 + | hypothetical protein OTT_1659 1688977 - 1689267 + | hypothetical protein TERM 1340 1689310 - 1689344 + F 88 -9.4 -4.39571 | opp_overlap 1689309 1689312, overlap 1689312 1689316 CCATATGTGATATAC CAGTCAGCTTAGCTAA TTG TTAGCTAAGCTTGCTA TTTTAAATTTCTAAA TERM 1341 1689342 - 1689312 - f 78 -9.8 -2.69977 | opp_overlap 1689310 1689312 1689316, overlap 1689309 ATATGTGATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 1342 1689312 - 1689342 + F 95 -12 -3.79633 | opp_overlap 1689312 1689309, overlap 1689310 1689316 ATATGTGATATACCA GTCAGCTTAGCTAA TTG TTAGCTAAGCTTGC TATTTTAAATTTCTA TERM 1343 1689316 - 1689338 + F 100 -13.6 -3.55453 | opp_overlap 1689312 1689309, overlap 1689312 1689310 GTGATATACCAGTCA GCTTAGCTAA TTG TTAGCTAAGC TTGCTATTTTAAATT OTT_1660 1689495 - 1689968 + | hypothetical protein OTT_1661 1689991 - 1690929 + | hypothetical protein OTT_1662 1690948 - 1691442 + | hypothetical protein OTT_1663 1691484 - 1691876 + | RelA/SpoT-related protein OTT_1664 1691916 - 1692071 + | RelA/SpoT-related protein TERM 1344 1692064 - 1692093 + F 74 -8.7 -3.30214 | opp_overlap 1692072 ACTGTGAGCTTTATG CTACCTAATAAAC TAAA GTTTAATAGGTGG TTAATGTAGTGAATT OTT_1665 1692193 - 1693191 + | hypothetical protein OTT_1666 1693522 - 1693259 - | putative conjugative transfer protein TraD OTT_1667 1694960 - 1693887 - | TPR repeat-containing protein 08 TERM 1345 1695038 - 1695054 + r 70 -6.7 -3.89614 | opp_overlap 1695045 GTATTAATAATACTG TCATATA TTT TATATGA TTTATAAAAATTCCC OTT_1668 1695547 - 1695308 - | putative conjugative transfer protein TraD OTT_1669 1695716 - 1696135 + | hypothetical protein TERM 1346 1696991 - 1696979 - g 73 -7.7 -3.72893 | opp_overlap 1696969 TATGTCTGCACCAAA TGCAG TTT CTGCA AGTATTGGCTTAACT OTT_1670 1696158 - 1697111 + | hypothetical protein OTT_1671 1697158 - 1697409 + | hypothetical protein TERM 1347 1697520 - 1697497 - T 73 -7.6 -3.86346 | gap 1, overlap 1697514 TTATTTTTGCACAAA CTCAA-GTTCA TAT TGAACATTGAG AATGCCATTCTTTAA OTT_1672 1697940 - 1697482 - | putative conjugative transfer protein TraD OTT_1673 1698219 - 1700231 + | putative conjugative transfer protein TraA OTT_1674 1700246 - 1700437 + | putative conjugative transfer protein TraA OTT_1675 1700473 - 1700865 + | putative conjugative transfer protein TraI OTT_1676 1701498 - 1700851 - | putative transposase TERM 1348 1701147 - 1701173 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTGTAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT OTT_1677 1702620 - 1701550 - | putative conjugative transfer protein TraI TERM 1349 1702875 - 1702895 + r 74 -6.2 -4.55491 | TTGCAAGCATCACTG TGAGCTGT TATGT ATAGCTCA TTTTGTAATTCGCTC OTT_1678 1704699 - 1702951 - | putative conjugative transfer protein TraA TERM 1350 1703342 - 1703372 + g 82 -7.7 -4.61162 | overlap 1703335 1703333 GTTTTTCCTTCTGCT GACAGAATGGTTA CATCA TAATCATACTGTC TTTGTTCTTTGATGT OTT_1679 1705757 - 1704741 - | putative conjugative transfer protein TraA OTT_1680 1706035 - 1706490 + | putative conjugative transfer protein TraD OTT_1681 1706582 - 1707124 + | hypothetical protein OTT_1682 1707515 - 1707210 - | RelA/SpoT-related protein TERM 1351 1707273 - 1707301 + g 73 -7.5 -3.66095 | opp_overlap 1707273 TCGTAATTTAAGGTA CTTAGCAAGAGGT ATA AATTCTTGCTGAG TTTCAATGACGATTT TERM 1352 1707309 - 1707322 + g 71 -3.1 -5.16237 | TTGCTGAGTTTCAAT GACGA TTTT TTGTC TTTTTTCATAAGGTT TERM 1353 1707425 - 1707442 + g 79 -2.7 -5.89921 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTATTATCCT OTT_1683 1709041 - 1707902 - | reverse transcriptase OTT_1684 1710841 - 1709642 - | putative integrase TERM 1354 1711245 - 1711260 + H 95 -4.8 -6.01369 | opp_overlap 1711245 ATATAAAGTGTAGAA GTTAAT AAAA ATTAAC TTTTTTTCTTCTTTA OTT_1685 1711409 - 1711675 + | hypothetical protein TERM 1355 1711687 - 1711665 - f 72 -5.7 -4.59853 | TTAAGTTGCTAAAAA TATCACACT AACAG AATGTGATA AATCAAAGATATTAC OTT_1686 1711741 - 1711992 + | hypothetical protein OTT_1687 1712235 - 1712726 + | hypothetical protein OTT_1688 1713514 - 1712765 - | Predicted sulfurtransferase OTT_1689 1714260 - 1713625 - | hypothetical protein OTT_1690 1714853 - 1714716 - | transposase OTT_1691 1716428 - 1715274 - | hypothetical protein TERM 1356 1715587 - 1715564 - G 71 -8.2 -3.37091 | opp_overlap 1715563 1715560, overlap 1715559 1715566 AGCTCCAAAAGTCAA CATGTGCTGA CAAG TCAGCACATC CTAAATTTTCTAATA TERM 1357 1715585 - 1715566 - G 85 -10.8 -3.25113 | opp_overlap 1715563 1715560, overlap 1715559 1715564 CTCCAAAAGTCAACA TGTGCTGA CAAG TCAGCACA TCCTAAATTTTCTAA OTT_1692 1717016 - 1717138 + | hypothetical protein TERM 1358 1718177 - 1718157 - f 83 -7.7 -4.76963 | overlap 1718147 TGATACAACACAAAA TTGTTGAAA ATG CTTCAACAA TAATCCATAATAGTT TERM 1359 1719267 - 1719225 - f 86 -9.5 -3.8397 | opp_overlap 1719227, overlap 1719227 ATATACTGACAATAA TATAGCTAAACTACTATAA AACAG TCATAATAGTTTAGCTATT ACTATGATGTAAACA TERM 1360 1719265 - 1719227 - f 95 -12.1 -3.4997 | opp_overlap 1719227, overlap 1719225 ATACTGACAATAATA TAGCTAAACTACTATAA AACAG TCATAATAGTTTAGCTA TTACTATGATGTAAA OTT_1693 1719514 - 1719780 + | reverse transcriptase TERM 1361 1719780 - 1719763 - Tf 74 -4.9 -5.1523 | opp_overlap 1719774 1719776 TTTAGAACAGAAAAA TCAGCTA GTCA TAGCTAA ACAATTATAACTGTT OTT_1694 1720320 - 1719880 - | hypothetical protein OTT_1695 1720304 - 1721443 + | reverse transcriptase OTT_1696 1722521 - 1721877 - | ankyrin repeat-containing protein 03_13 OTT_1697 1722954 - 1722559 - | RelA/SpoT-related protein OTT_1698 1724801 - 1723365 - | replicative DNA helicase OTT_1699 1725481 - 1724810 - | hypothetical protein TERM 1362 1725644 - 1725629 - H 83 -4.8 -5.74288 | opp_overlap 1725629 ATAAAGAAGAAAAAA GTTAAT TTTT ATTAAC TTCTACACTTTATAT OTT_1700 1726048 - 1727247 + | putative integrase OTT_1701 1727368 - 1727703 + | hypothetical protein OTT_1702 1727703 - 1728254 + | putative conjugative transfer protein TraE OTT_1703 1728251 - 1728727 + | hypothetical protein OTT_1704 1729092 - 1729421 + | hypothetical protein OTT_1705 1729740 - 1730558 + | putative conjugative transfer protein TraB OTT_1706 1730521 - 1730790 + | putative conjugative transfer protein TraB OTT_1707 1730790 - 1731119 + | hypothetical protein TERM 1363 1732997 - 1733011 + G 81 -10 -3.14013 | opp_overlap 1732990, overlap 1732996 1733006 AAACAGATCATCTAC GCTCTG TAC CAGAGC TGTTAGCTGTGATTG OTT_1708 1731100 - 1733112 + | putative conjugative transfer protein TraC OTT_1709 1733281 - 1733589 + | putative conjugative transfer protein TraC TERM 1364 1734190 - 1734180 - g 71 -6.8 -3.97108 | AAGTTTAAAATACAA GCTG TGC CAGC CATAATAGAACAACA TERM 1365 1734219 - 1734209 - g 70 -4 -4.99312 | opp_overlap 1734212, overlap 1734212 AATAGAACAACAAAA TAAG GTG CTTA AAATTAGCGAAATAA OTT_1710 1733586 - 1734245 + | putative conjugative transfer protein TraW OTT_1711 1734332 - 1734535 + | hypothetical protein OTT_1712 1734536 - 1735513 + | putative conjugative transfer protein TraU OTT_1713 1735536 - 1735919 + | putative conjugative transfer protein TrbC OTT_1714 1735916 - 1737607 + | putative conjugative transfer protein TraN OTT_1715 1737604 - 1738302 + | putative conjugative transfer protein TraF OTT_1716 1738299 - 1738928 + | putative conjugative transfer protein TraH OTT_1717 1738978 - 1739322 + | putative conjugative transfer protein TraH OTT_1718 1739379 - 1739753 + | transposase OTT_1719 1739740 - 1740246 + | transposase OTT_1720 1740356 - 1740568 + | putative conjugative transfer protein TraH OTT_1721 1740568 - 1740903 + | putative conjugative transfer protein TraG TERM 1366 1741534 - 1741518 - g 73 -8.1 -3.54574 | overlap 1741527 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 1367 1741680 - 1741705 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 1741680 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_1722 1741080 - 1742042 + | transposase TERM 1368 1742036 - 1742086 + F 100 -13.3 -4.84262 | opp_overlap 1742036 1742040 1742043 1742046, overlap 1742040 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1369 1742086 - 1742036 - f 100 -13.3 -2.84098 | opp_overlap 1742036 1742040, overlap 1742040 1742043 1742046 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1370 1742040 - 1742082 + F 91 -8.3 -4.91657 | opp_overlap 1742036 1742040 1742043 1742046, overlap 1742036 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1371 1742082 - 1742040 - f 80 -8.3 -4.10331 | opp_overlap 1742040 1742036, overlap 1742036 1742043 1742046 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1372 1742698 - 1742722 + G 84 -10.1 -3.46602 | TTTAGTAGGATTATT CTTGATAGCTA ATC TAGCTATCGGG TTATGGTATGGAAAG OTT_1723 1742657 - 1745908 + | sensor histidine kinase/response regulator/transporter hybrid protein OTT_1724 1746991 - 1746029 - | hypothetical protein OTT_1725 1747688 - 1747113 - | RelA/SpoT-related protein OTT_1726 1748646 - 1747789 - | hypothetical protein TERM 1373 1747946 - 1747956 + g 71 -5.4 -4.68724 | opp_overlap 1747944 1747946 ACCAACTCAAAATCA GCTA ATT TAGC TTTTATATTCCCTAA OTT_1727 1749396 - 1748668 - | hypothetical protein TERM 1374 1749690 - 1749680 - H 81 -3.2 -5.76633 | GGATACATAAAAAAA GCCT TGT AAGC GTTATTATTACTGGC OTT_1728 1749772 - 1750581 + | N6 adenine-specific DNA-methyltransferase OTT_1729 1751133 - 1750585 - | hypothetical protein OTT_1730 1751648 - 1751181 - | ankyrin repeat-containing protein 03_14 OTT_1731 1753479 - 1752043 - | replicative DNA helicase TERM 1375 1752289 - 1752319 + g 95 -8.5 -4.98522 | gap 1, opp_overlap 1752289 GTCCTGTTCAATTGA GCCTGATTCTCTTA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT TERM 1376 1752384 - 1752399 + g 80 -7.6 -4.1721 | opp_overlap 1752396, overlap 1752389 TGACTGGAATATTGA GCTCTT TAGC AAGAGC TTTTAAGCTCTGACT OTT_1732 1754681 - 1753488 - | hypothetical protein TERM 1377 1753886 - 1753908 + g 74 -5.7 -4.58283 | GTAATATCTTTGATC TATCACATT CTGTT AGTGTGATA TTTTTAAGCAACTTG OTT_1733 1755452 - 1754757 - | putative conjugative transfer protein TraH OTT_1734 1755555 - 1755442 - | putative conjugative transfer protein TraH OTT_1735 1756023 - 1755631 - | putative integrase OTT_1736 1756902 - 1756606 - | reverse transcriptase znuB 1758449 - 1757661 - | zinc/manganese ABC transporter permease protein znuC 1759143 - 1758430 - | zinc/manganese ABC transporter ATP-binding protein OTT_1739 1759973 - 1759413 - | hypothetical protein dnaX 1761664 - 1759985 - | DNA polymerase III gamma and tau chains TERM 1378 1760932 - 1760946 + g 77 -8.6 -3.67634 | opp_overlap 1760931 1760932 CTACTGCCTCAGAAC TTGCAG TAT CTGCAA TATTTTGGGCTAATG sca2 1762740 - 1765223 + | putative cell surface antigen TERM 1379 1765232 - 1765204 - T 88 -10.5 -3.48342 | opp_overlap 1765204 1765212 1765230, overlap 1765212 AAGTAAGCACTATAA GTATGAAAGCTAA TTT TTAGCTTTTATAC TTTAGCAAGTATATG TERM 1380 1765204 - 1765232 + T 100 -12.7 -3.57119 | opp_overlap 1765204 1765212, overlap 1765212 1765230 AAGTAAGCACTATAA GTATGAAAGCTAA TTT TTAGCTTTTATAC TTTAGCAAGTATATG TERM 1381 1765212 - 1765224 + T 74 -6.3 -4.61566 | opp_overlap 1765212 1765204, overlap 1765204 ACTATAAGTATGAAA GCTAA TTT TTAGC TTTTATACTTTAGCA OTT_1742 1766790 - 1765315 - | hypothetical protein TERM 1382 1765420 - 1765436 + g 71 -2.3 -5.33866 | overlap 1765422 GCCTAAAATTGCTAT TACAATA TCA TATTGCA TTTTTTCTAGATTTA xseA 1768219 - 1766849 - | exodeoxyribonuclease large subunit TERM 1383 1768255 - 1768267 + r 84 -3.5 -5.86976 | TAATCAATAATTTCA TTTTA TAC TAAAA TTTTTTATTTTATGA phnP 1769164 - 1768415 - | PhnP protein OTT_1745 1769269 - 1769937 + | putative membrane-associated phospholipid phosphatase TERM 1384 1769936 - 1769958 + F 77 -2 -5.7946 | overlap 1769938 CTTGCAAAATAAAGT GATGTTATGA AAG TTATAGCAGC TTTTTTTATTACGGA rplU 1770075 - 1770401 + | 50S ribosomal protein L21 rpmA 1770442 - 1770711 + | 50S ribosomal protein L27 OTT_1748 1772829 - 1773032 + | transposase TERM 1385 1773255 - 1773273 + F 77 -6.1 -4.68705 | ATAATTGCTTTCCAA TCTATTG AACGG CAATAGA TTTTCTTGAAATTAT OTT_1749 1775964 - 1776116 + | putative conjugative transfer protein TraC TERM 1386 1776146 - 1776127 - g 91 -3.6 -6.14618 | gap 1, opp_overlap 1776133 GATAAAACAAAAAAA GCTAA-GCA ATA TGCATCAGC ATTTTGTTCGATGTT OTT_1750 1776106 - 1776240 + | putative conjugative transfer protein TraC TERM 1387 1776591 - 1776607 + F 70 -2.3 -5.38951 | overlap 1776588 TTTTTTCTTTTGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATACCTT TERM 1388 1777512 - 1777500 - g 74 -6.3 -4.45115 | overlap 1777497 1777502 ATTAATAGAAAACAA TCCTA CTC TAGGA ATAGAGCAGCATAAA OTT_1751 1777438 - 1778115 + | putative integrase OTT_1752 1778253 - 1778576 + | hypothetical protein OTT_1753 1778576 - 1779127 + | putative conjugative transfer protein TraE OTT_1754 1779124 - 1779600 + | hypothetical protein OTT_1755 1779745 - 1780077 + | hypothetical protein OTT_1756 1780131 - 1780526 + | putative conjugative transfer protein TraB OTT_1757 1780620 - 1781003 + | hypothetical protein OTT_1758 1781335 - 1781709 + | transposase OTT_1759 1781696 - 1782202 + | transposase OTT_1760 1782279 - 1782617 + | transposase OTT_1761 1782823 - 1783086 + | hypothetical protein TERM 1389 1783652 - 1783624 - g 77 -7.5 -4.04752 | opp_overlap 1783624, overlap 1783625 AAATCATACTAGAAA CTCAGCAAGAATT TAT ACCTCTTGCTGAA TACCTTAAATTACCG TERM 1390 1783651 - 1783625 - g 72 -8.8 -3.01766 | opp_overlap 1783624, overlap 1783624 AATCATACTAGAAAC TCAGCAAGAATT TAT ACCTCTTGCTGA ATACCTTAAATTACC OTT_1762 1783128 - 1783715 + | RelA/SpoT-related protein TERM 1391 1783708 - 1783737 + F 74 -8.7 -3.30214 | opp_overlap 1783716 ACTGTGAGCTTTATG CTACCTAATAAAC TAAA GTTTAATAGGTGG TTAATGTAGTGAATT OTT_1763 1784521 - 1784730 + | exodeoxyribonuclease III pgsA 1785715 - 1785167 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1392 1785672 - 1785642 - G 88 -6.5 -5.50723 | gap 1, opp_overlap 1785643 1785646, overlap 1785646 TCATCAAAATAAAAA GTAATTAGTATAAT TGGT ATTATACTAATT-C TAGTAGCTGTTAGAA TERM 1393 1785646 - 1785669 + g 73 -8.4 -3.44206 | opp_overlap 1785642 1785646, overlap 1785643 CAAAATAAAAAGTAA TTAGTATAAT TGGT ATTATACTAA TTCTAGTAGCTGTTA TERM 1394 1785669 - 1785646 - G 79 -8.4 -4.02606 | opp_overlap 1785643 1785646, overlap 1785642 CAAAATAAAAAGTAA TTAGTATAAT TGGT ATTATACTAA TTCTAGTAGCTGTTA TERM 1395 1785801 - 1785815 + r 70 -5.7 -4.42868 | ACATAATTGTATACT GTTGC TTACT GCAAC TATTTTTTGTTCTAT OTT_1765 1786715 - 1786278 - | transposase OTT_1766 1787957 - 1790218 + | outer membrane protein TERM 1396 1790200 - 1790226 + F 100 -14 -4.67904 | opp_overlap 1790200 1790207, overlap 1790207 TATTGGGTCTGCAAA TATAAAAGCTAG TTT CTAGCTTTTATA TTTTTCAAATTAGTA TERM 1397 1790226 - 1790200 - f 100 -14 -3.53224 | opp_overlap 1790200 1790207, overlap 1790207 TATTGGGTCTGCAAA TATAAAAGCTAG TTT CTAGCTTTTATA TTTTTCAAATTAGTA TERM 1398 1790219 - 1790207 - f 83 -7.7 -4.78848 | opp_overlap 1790200 1790207, overlap 1790200 TCTGCAAATATAAAA GCTAG TTT CTAGC TTTTATATTTTTCAA TERM 1399 1790207 - 1790219 + F 88 -7.7 -4.98672 | opp_overlap 1790207 1790200, overlap 1790200 TCTGCAAATATAAAA GCTAG TTT CTAGC TTTTATATTTTTCAA TERM 1400 1792257 - 1792243 - g 72 -3.6 -5.26247 | TCAAAACAAAGAAAA TTCTCT AAA AGAAAA ACTAAGTCCTGATAT OTT_1767 1790708 - 1794355 + | hypothetical protein OTT_1768 1795027 - 1794710 - | transposase TERM 1401 1794839 - 1794855 + g 71 -2.3 -5.38951 | overlap 1794836 TTTTTTCTTTGGTAA TTCAGAA TTA TTGTGAA TTTTTTGTATAACTT OTT_1769 1795119 - 1795015 - | transposase OTT_1770 1795474 - 1795232 - | transposase TERM 1402 1795338 - 1795321 - G 78 -5.7 -4.88228 | ACCCAACATGAAAAA TAAATAG TATA CTATTTA TTAGACAATTTTTGC TERM 1403 1795816 - 1795861 + r 83 -8.7 -4.48741 | gap 1, opp_overlap 1795828, overlap 1795802 1795818 TCTAACTATTTCTTA TAGTTA-GTTAAATCCACTTAA ACA TGAAGTGGATTTAATATAACTG TTTTATAGTGGCTTA TERM 1404 1795818 - 1795859 + r 82 -9.1 -3.84585 | gap 1, opp_overlap 1795828, overlap 1795802 1795816 TAACTATTTCTTATA GTTA-GTTAAATCCACTTAA ACA TGAAGTGGATTTAATATAAC TGTTTTATAGTGGCT tyrS 1797602 - 1796361 - | tyrosyl-tRNA synthetase TERM 1405 1796885 - 1796899 + g 78 -5.7 -4.77925 | opp_overlap 1796885 CTTCATTTAACCAAA CAGCT CCATC AGCTG TTTTTCCCATTTTTT OTT_1772 1798745 - 1799101 + | hypothetical protein OTT_1773 1799261 - 1799476 + | hypothetical protein OTT_1774 1799686 - 1800030 + | putative conjugative transfer protein TraC TERM 1406 1800971 - 1800955 - f 70 -2.3 -5.38951 | AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTGCAAAAGAAAAAA OTT_1775 1800972 - 1801280 + | transposase TERM 1407 1801355 - 1801384 + T 81 -10.3 -2.73799 | opp_overlap 1801355 1801358, overlap 1801358 1801361 AATGTGGTTCTAACA GAAGAATAAAAAG AACT TTTTTTATTCTTC TCAATTATTTCTAAC TERM 1408 1801384 - 1801355 - T 78 -9.6 -3.02043 | opp_overlap 1801355 1801358 1801361, overlap 1801358 AATGTGGTTCTAACA GAAGAATAAAAA GAACTT TTTTTATTCTTC TCAATTATTTCTAAC sohB 1802323 - 1801406 - | SohB protease miaB 1802614 - 1803963 + | tRNA-methylthiotransferase MiaB protein TERM 1409 1804805 - 1804791 - g 80 -7.2 -4.64766 | CTGATATTGTAAAAA GCAAAA TGT TTTTGC CATGGAGCAATAGTC hemF 1804127 - 1804963 + | coproporphyrinogen III oxidase precursor OTT_1779 1805103 - 1805444 + | hypothetical protein OTT_1780 1806463 - 1806032 - | transposase OTT_1781 1807476 - 1808021 + | putative integrase OTT_1782 1808376 - 1808585 + | putative integrase TERM 1410 1808636 - 1808653 + T 74 -8.5 -3.17723 | opp_overlap 1808633 1808628 1808639, overlap 1808639 AAAATCACAGTAGTA GAATGAG AAAT CTCATTC TTCAATTGAGGCTGA OTT_1783 1809673 - 1808750 - | putative integrase OTT_1784 1810774 - 1810607 - | hypothetical protein OTT_1785 1811125 - 1810904 - | hypothetical protein rpmE 1811625 - 1811401 - | 50S ribosomal protein L31 rpmB 1811922 - 1811635 - | 50S ribosomal protein L28 TERM 1411 1811798 - 1811786 - G 82 -7.7 -4.35926 | overlap 1811780 ACTTTAAATTTAAAA GCCTT TTT AAGGC TATCACTAAACAAAG TERM 1412 1812627 - 1812643 + G 75 -5.1 -4.94262 | ATATTAGAATTTTAG TGCTGTT CTT ATCAGCA TTTATTTTTGCTATA OTT_1788 1812167 - 1813039 + | hypothetical protein proP1 1813057 - 1814313 + | proline/betaine transporter OTT_1790 1815042 - 1815794 + | hypothetical protein TERM 1413 1815987 - 1815958 - T 100 -10.1 -5.0095 | opp_overlap 1815964, overlap 1815959 AAAAAGATAAGAAAA TGCATAGCAATAC TAAA GCATTGCTATGCT GCGCTATTTATAGTC TERM 1414 1815986 - 1815959 - T 100 -13.6 -3.5691 | opp_overlap 1815964, overlap 1815958 AAAAGATAAGAAAAT GCATAGCAATAC TAAA GCATTGCTATGC TGCGCTATTTATAGT pbpE 1817384 - 1816173 - | penicillin-binding protein 4 TERM 1415 1817192 - 1817212 + g 72 -2.5 -5.35224 | overlap 1817193 1817196 TGCAATCAAAATGCC CTACTGCTC CTC GAGCAATAA TTTTATTTTTATCAG aspS 1819203 - 1817410 - | asparaginyl-tRNA synthetase TERM 1416 1819149 - 1819161 + g 71 -9.1 -2.53876 | opp_overlap 1819138 ATAACTTAACTTGCA GCCCA ACG TGGGC TAAATTAAGCTCCCC rpoC 1823657 - 1819467 - | DNA-directed RNA polymerase beta prime chain TERM 1417 1823195 - 1823176 - G 76 -7.2 -4.20516 | TCCTCAGTTAATAAA TCACCTTT ATGC AAAGGCGA CAACCCAGGATCCAT TERM 1418 1823700 - 1823716 + r 71 -4.5 -4.86033 | overlap 1823696 TAAACTTTTTTTTAA TTCATTG AAC TAATGAA TTTTTATAGAGCTTT rpoB 1827898 - 1823774 - | DNA-directed RNA polymerase beta chain TERM 1419 1827245 - 1827216 - G 95 -8.9 -5.20333 | gap 1, opp_overlap 1827205, overlap 1827220 GATTCATAATAAAAA TTTA-GTATGTCAT GTG ATGACATACCTAAA GCCATAAGCAAAGTA TERM 1420 1827240 - 1827220 - G 86 -11.3 -2.9432 | opp_overlap 1827205, overlap 1827216 CATAATAAAAATTTA GTATGTCAT GTG ATGACATAC CTAAAGCCATAAGCA TERM 1421 1827845 - 1827825 - G 78 -9.1 -3.40611 | opp_overlap 1827825, overlap 1827823 TGCACTTCAATAAGA TTTGGTATC GAA GACACCAAA TTTATTTTACCAAAA TERM 1422 1827825 - 1827845 + g 79 -6.9 -4.64861 | opp_overlap 1827825 1827823 TGCACTTCAATAAGA TTTGGTATC GAA GACACCAAA TTTATTTTACCAAAA rplL 1828603 - 1828214 - | 50S ribosomal protein L7/L12 TERM 1423 1828567 - 1828551 - G 91 -8.1 -5.04175 | opp_overlap 1828550 TCAATCACAGAAAAA GTTGATA ACA TATCAAC AGCTTTCTTTACATT rplJ 1829134 - 1828625 - | 50S ribosomal protein L10 rplA 1829887 - 1829138 - | 50S ribosomal protein L1 TERM 1424 1829235 - 1829251 + g 79 -7.3 -4.44392 | CCCTTCAAATAAGCT CCTTTTG CTT CAGAAGG TTTACTTTTTATTAT rplK 1830337 - 1829891 - | 50S ribosomal protein L11 nusG 1830913 - 1830377 - | transcription antitermination protein NusG secE 1831156 - 1830956 - | preprotein translocase SecE subunit TERM 1425 1831261 - 1831277 + r 70 -8.7 -2.64794 | opp_overlap 1831260 TTGAACCCGCAACAC CCGGTTT TGG AGACCGG TGCTCTACCATTGAG tuf 1832604 - 1831420 - | elongation factor EF-Tu TERM 1426 1832801 - 1832812 + r 77 -3 -5.71712 | ATTAGTTATCACATT CTTT AACA AAAG TTTTTTTCTCTCAAC plsC 1833541 - 1832777 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase recR 1834269 - 1833658 - | recombination protein RecR OTT_1804 1834893 - 1834357 - | putative intracellular septation protein OTT_1805 1835736 - 1834897 - | high-affinity Fe2+/Pb2+ permease OTT_1806 1836130 - 1835765 - | hypothetical protein OTT_1807 1837828 - 1836596 - | hypothetical protein glnQ 1838745 - 1838014 - | glutamine ABC transporter ATP-binding protein GlnQ glnP 1839355 - 1838738 - | probable glutamine transport system permease protein GlnP TERM 1427 1838958 - 1838941 - G 72 -7.1 -3.85878 | TAAGAAGATTAATAA CTTCATT AACT AATGAAG GAATAATTTTTCTAA TERM 1428 1839174 - 1839162 - G 76 -3.5 -5.49568 | AACTTAAAAGAAAAA TATAT TAC ATATA ACTGTATTATTAATG OTT_1810 1840418 - 1840651 + | transposase OTT_1811 1840780 - 1841172 + | transposase TERM 1429 1841643 - 1841620 - f 88 -6.8 -5.20154 | ATAGAATGGAAAAAA GTCTCTCA TGGAATAT TGAGAGAC TAAAAGATCTATATC TERM 1430 1841943 - 1841932 - f 100 -7.2 -5.75342 | opp_overlap 1841932 TCTTTGGAAAAAAAA GCGC TACT GCGC TTACCTGCTAGCTTA TERM 1431 1841960 - 1841996 + F 78 -5.6 -4.98103 | opp_overlap 1841963, overlap 1841989 TACCTGCTAGCTTAA TAATTTTATAAAAA CTTACATCT TTTTTATAAAATTA TTTTATCTTTTCTTG TERM 1432 1842078 - 1842022 - f 76 -9 -3.04144 | opp_overlap 1842032 1842034 TCTTGATTTTTAACA TGGTATCTATTCCAGGCGTAATAAAA TTTTT TTTTATTACGCCTGTATTTAATACAA ATATGTTCTATATAA TERM 1433 1842032 - 1842068 + F 100 -14 -3.74251 | opp_overlap 1842022, overlap 1842034 TAACATGGTATCTAT TCCAGGCGTAATAAAA TTTTT TTTTATTACGCCTGTA TTTAATACAAATATG TERM 1434 1842034 - 1842066 + F 100 -16.6 -3.45324 | opp_overlap 1842022, overlap 1842032 ACATGGTATCTATTC CAGGCGTAATAAAA TTTTT TTTTATTACGCCTG TATTTAATACAAATA TERM 1435 1842079 - 1842106 + F 74 -2.8 -5.56568 | opp_overlap 1842080, overlap 1842080 CTGTATTTAATACAA ATATGTTCTATA TAAA TAAAGAACATAA TTTTTTTACTGCTAT TERM 1436 1842105 - 1842080 - f 70 -6.3 -4.21607 | opp_overlap 1842080 1842079 TGTATTTAATACAAA TATGTTCTATA TAAA TAAAGAACATA ATTTTTTTACTGCTA TERM 1437 1842545 - 1842501 - f 83 -6.8 -4.9448 | gap 1, opp_overlap 1842507, overlap 1842502 1842505 AGGCAGTAAATAAAA GGTATACTAGAGATAATATAT AATT ATATATTATCTCTAGTTT-CA ATTAATAACCGTTTA TERM 1438 1842544 - 1842502 - f 88 -10.3 -3.55603 | gap 1, opp_overlap 1842507, overlap 1842501 1842505 GGCAGTAAATAAAAG GTATACTAGAGATAATATAT AATT ATATATTATCTCTAGTTT-C AATTAATAACCGTTT TERM 1439 1842542 - 1842505 - f 100 -13.1 -2.8949 | opp_overlap 1842507, overlap 1842502 1842501 AGTAAATAAAAGGTA TACTAGAGATAATATAT AATT ATATATTATCTCTAGTT TCAATTAATAACCGT TERM 1440 1842507 - 1842540 + F 100 -15.7 -3.78329 | opp_overlap 1842505 1842502 1842501 TAAATAAAAGGTATA CTAGAGATAATATAT AATT ATATATTATCTCTAG TTTCAATTAATAACC TERM 1441 1843295 - 1843308 + F 74 -3.9 -5.20606 | overlap 1843303 1843305 TTATAGAACTTACTA TTAAC TTAT GTTAA TTTTTATTAATATTT TERM 1442 1843554 - 1843543 - f 70 -3 -5.33785 | AATTAGTATAAAAAA TTTG CTAT CAAA AAGAAGCATAATATA TERM 1443 1843815 - 1843794 - f 91 -7.5 -5.20333 | TATGTAGAACAAAAA TTTAAAAAC CAGA GTTTTTAAA AATAAAGATAGTTGT OTT_1812 1843889 - 1844155 + | putative integrase TERM 1444 1844277 - 1844259 - f 88 -10.3 -3.38812 | opp_overlap 1844266, overlap 1844257 GTTGTGGTAAGAATA GTGCGAC TTCAT GTCGCAC ATGCATGTATGTAAA OTT_1813 1845397 - 1845678 + | transposase TERM 1445 1845731 - 1845716 - f 72 -4.8 -4.95167 | opp_overlap 1845716 TAAGGAAGAAGAAAA GTTAAT TTTT ATTAAC TTCTACACTTTATAG TERM 1446 1846735 - 1846723 - g 74 -6.3 -4.45115 | overlap 1846720 1846725 ATTAATAGAAAACAA TCCTA CTC TAGGA ATAGAGCAGCATAAA OTT_1814 1846220 - 1847338 + | putative integrase OTT_1815 1847464 - 1847799 + | hypothetical protein OTT_1816 1847799 - 1848350 + | putative conjugative transfer protein TraE OTT_1817 1848347 - 1848823 + | hypothetical protein OTT_1818 1849188 - 1849523 + | hypothetical protein OTT_1819 1849577 - 1850911 + | putative conjugative transfer protein TraB OTT_1820 1850911 - 1851204 + | hypothetical protein OTT_1821 1851185 - 1853674 + | putative conjugative transfer protein TraC TERM 1447 1854275 - 1854265 - g 71 -6.8 -4.00132 | AAATTTAAAATACAA GCTG TGC CAGC CATAATAGAACAACA OTT_1822 1853671 - 1854330 + | putative conjugative transfer protein TraW OTT_1823 1854416 - 1854619 + | hypothetical protein TERM 1448 1855451 - 1855440 - g 74 -2.2 -5.58074 | CAATTATGAAAAAAA GTCA GTAT CGAC TACAAATGACTTATC OTT_1824 1854623 - 1855600 + | putative conjugative transfer protein TraU OTT_1825 1855623 - 1856006 + | putative conjugative transfer protein TrbC OTT_1826 1856003 - 1857697 + | putative conjugative transfer protein TraN TERM 1449 1857739 - 1857761 + G 79 -4.8 -5.31275 | overlap 1857740 ATTAGTAGTTTTTCC ACTGTTGATG CTT CACCAACAGG TTTTTTATGGTACAA TERM 1450 1857740 - 1857760 + G 77 -8.3 -3.78042 | overlap 1857739 TTAGTAGTTTTTCCA CTGTTGATG CTT CACCAACAG GTTTTTTATGGTACA OTT_1827 1857694 - 1858398 + | putative conjugative transfer protein TraF OTT_1828 1858395 - 1859288 + | putative conjugative transfer protein TraH OTT_1829 1859218 - 1859697 + | putative conjugative transfer protein TraH TERM 1451 1860727 - 1860737 + G 74 -4 -5.17576 | overlap 1860722 ACATGATGCCGATTT TACA ATC TGTA TTTTTTGCATTAGTA TERM 1452 1860835 - 1860857 + G 75 -4.8 -5.06451 | opp_overlap 1860838 GGATTCTATTAATAA TATGGGTCAG CAG CTGGCCAGTA TTTTTTACAATAATC TERM 1453 1862209 - 1862192 - g 72 -2.7 -5.33131 | TAATAAAAAAATAAA GAATCTT GATC AAGTTTC TGATAGTATTAAGGA OTT_1830 1859697 - 1862324 + | putative conjugative transfer protein TraG OTT_1831 1862337 - 1863476 + | TPR repeat-containing protein 01_10 TERM 1454 1864027 - 1864004 - g 73 -8.2 -3.38674 | overlap 1863993 1864003 AAAAGGTCTAAAAAG GCCTCGAAAA TCTG TTTTGGAGGC TTGCCATTAGTAAAG OTT_1832 1863476 - 1865230 + | putative conjugative transfer protein TraD OTT_1833 1866251 - 1865232 - | putative transposase TERM 1455 1865894 - 1865908 + g 74 -8.6 -3.36769 | opp_overlap 1865894, overlap 1865877 1865893 CTATTGGTACAACAA GTGGTA ATT TACCAC GTTCTTTTTTACGCT TERM 1456 1865908 - 1865894 - G 79 -8.6 -3.79906 | opp_overlap 1865877 1865894 1865893 CTATTGGTACAACAA GTGGTA ATT TACCAC GTTCTTTTTTACGCT OTT_1834 1868908 - 1866236 - | putative conjugative transfer protein TraI TERM 1457 1868177 - 1868207 + g 72 -3.4 -5.31456 | gap 1, overlap 1868170 1868202 AGAGTTTGCCTTAGC TG-TGCTAAGCTG CTCTAT CAGGTTAGCAACA TTTTTTGTAGCTTGC TERM 1458 1868944 - 1868970 + r 86 -9.6 -3.83756 | CACTAAATTGTTTTG CGGTATAAATAT TTG ATATTTTTACCG TTTGAATTATAATTT OTT_1835 1871543 - 1869177 - | putative conjugative transfer protein TraA OTT_1836 1872005 - 1871607 - | putative conjugative transfer protein TraA TERM 1459 1872372 - 1872344 - g 91 -5.3 -5.7946 | TCTCCAACAAAAAAA GGCTAAACTAATC ATG GATGAGGTTAACC TTAAAATAAAAGAAC OTT_1837 1872300 - 1872755 + | putative conjugative transfer protein TraD OTT_1838 1873737 - 1872823 - | hypothetical protein OTT_1839 1874454 - 1873948 - | transposase OTT_1840 1874784 - 1874596 - | transposase TERM 1460 1874636 - 1874655 + g 80 -7.2 -4.6038 | gap 1, opp_overlap 1874636 ATTTTTGCATTATAA CCTT-TGGC TGA GCCATAAGG TTTTGCTTTAATATC OTT_1841 1875085 - 1875672 + | transposase OTT_1842 1877228 - 1876110 - | hypothetical protein OTT_1843 1877760 - 1878134 + | transposase OTT_1844 1878121 - 1878255 + | transposase OTT_1845 1878312 - 1878686 + | transposase OTT_1847 1879721 - 1879128 - | RelA/SpoT-related protein OTT_1846 1878673 - 1879179 + | transposase TERM 1461 1879209 - 1879237 + gT 73 -7.5 -3.66095 | overlap 1879196 TACGTTATTGCTATA CTTAGCAAGAGGT ATA AATTCTTGCTGAG TTTCAATGACGATTT TERM 1462 1879245 - 1879258 + gT 71 -3.1 -5.16237 | overlap 1879196 TTGCTGAGTTTCAAT GACGA TTTT TTGTC TTTTTTCATAAGGTT TERM 1463 1879361 - 1879378 + gT 79 -2.7 -5.89921 | TATAAAATGTTTGAA TCATTTC TCTA GAACTGA TTTTTTTATTATCCT OTT_1848 1880714 - 1879857 - | hypothetical protein TERM 1464 1880014 - 1880024 + g 71 -5.4 -4.62984 | opp_overlap 1880014 1880012 ACCAACTCAAAATCA GCTA ATT TAGC TTTTATATCTCCTAA OTT_1849 1881465 - 1880698 - | hypothetical protein TERM 1465 1881630 - 1881649 + H 70 -2.2 -5.38348 | opp_overlap 1881624 1881643, overlap 1881624 1881641 1881643 ATCAGTACATGACTT TTTGTCAT AATT ATGAAAAA TTTTTTCATCTTTTT TERM 1466 1882317 - 1882333 + G 76 -5.2 -5.04601 | overlap 1882310 CTTTTAACTGGCACA TCCATT TGTGC AATGGA TTTTTCGTTTATAGA OTT_1850 1881822 - 1882634 + | N6 adenine-specific DNA-methyltransferase OTT_1851 1883147 - 1882638 - | hypothetical protein OTT_1852 1883895 - 1883248 - | ankyrin repeat-containing protein 03_15 TERM 1467 1883391 - 1883379 - G 82 -7.7 -4.51197 | opp_overlap 1883377 1883373 1883379 CATAATCAATCAAAA GCTGT ATA ACAGC TATGATTTTATTACG OTT_1853 1884508 - 1883933 - | RelA/SpoT-related protein OTT_1854 1886178 - 1884742 - | replicative DNA helicase TERM 1468 1884988 - 1885018 + g 95 -8.5 -4.98522 | gap 1, opp_overlap 1884988 GTCCTGTTCAATTGA GCCTGATTCTCTTA GATC TGAGAGAAT-AGGC TTTTTATCTAACCTT OTT_1855 1887249 - 1886203 - | hypothetical protein TERM 1469 1886975 - 1886989 + g 74 -8.6 -3.3375 | opp_overlap 1886972 1886968, overlap 1886973 1886988 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGTGTTAGT TERM 1470 1887481 - 1887456 - R 76 -9.1 -2.99473 | opp_overlap 1887469 1887471 GTAAATGACTATATA TGTACCTGAAA CTTT TTTCAGGTTCA CCTGAAATTTCTTTC OTT_1856 1887969 - 1887436 - | hypothetical protein TERM 1471 1887469 - 1887512 + g 79 -4.9 -5.16572 | opp_overlap 1887456, overlap 1887471 TATGTACCTGAAACT TTTTTCAGGTTCA-CCTGAAA TTTC TTTCAGGTTGGAGC-GAAAAA TTTTTTGGGTTAGAT TERM 1472 1887471 - 1887488 + g 88 -8.5 -4.46233 | opp_overlap 1887456, overlap 1887469 TGTACCTGAAACTTT TTTCAGG TTCA CCTGAAA TTTCTTTCAGGTTGG TERM 1473 1887554 - 1887574 + g 95 -9.1 -5.08011 | TCTCCTTTTGTTTCT TTTTCAGTG AAA CGCTGAAAA TTTTTTAGAAGTTTT OTT_1857 1888957 - 1888079 - | hypothetical protein TERM 1474 1888182 - 1888196 + g 74 -8.6 -3.3375 | overlap 1888180 1888195 CTATCAGACTTGTGT TGCAGT GCA ACTGCA TCTTCTGGTGTTAGT TERM 1475 1888335 - 1888361 + g 76 -5.4 -4.96523 | opp_overlap 1888335 1888347, overlap 1888348 GAAATCTGTATATCA TTTTCAAAAT CATCAAC ATTTTGAAAA TTTTGTTCTTCATTT TERM 1476 1888483 - 1888464 - G 75 -5 -5.00884 | opp_overlap 1888465, overlap 1888465 ATGTCCCTGAAAAAA GTTTCAGG TTGA CCTGAAAT TTCTTTCAGGTTGGG TERM 1477 1888465 - 1888482 + g 88 -8.5 -4.46233 | opp_overlap 1888464 1888465 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 1478 1888482 - 1888465 - G 77 -8.5 -3.60048 | opp_overlap 1888465, overlap 1888464 TGTCCCTGAAAAAAG TTTCAGG TTGA CCTGAAA TTTCTTTCAGGTTGG TERM 1479 1888554 - 1888572 + g 70 -4.6 -4.82901 | overlap 1888556 CCTTTTTCACTATAG TGCTGAAA ATT TTTCAGAA TTTTTATGCAAGGGA OTT_1858 1889359 - 1890219 + | transposase TERM 1480 1891036 - 1891046 + F 71 -2.6 -5.40072 | opp_overlap 1891036 1891041 TATCTTCTCGTAGAA TATT AGC AATA TTTTTTTGCGAAAAA OTT_1859 1893427 - 1894326 + | hypothetical protein OTT_1860 1894494 - 1895375 + | hypothetical protein TERM 1481 1895766 - 1895742 - T 83 -7.9 -4.63928 | opp_overlap 1895744 ACATTAGTGTAAAAA TACATACCAGA ATC TCTGGCAAGTA TGATCAATATGAAAA OTT_1861 1896117 - 1895800 - | transposase rluC 1897884 - 1896946 - | ribosomal large subunit pseudouridine synthase C holB 1898740 - 1897868 - | DNA polymerase III delta subunit TERM 1482 1898694 - 1898717 + g 93 -8.3 -5.252 | TTAATTATCCAGGCA TTGGCAAAA ATGTTA TTTTGCCAA TTTTTTATGAAAGTA ppa 1899291 - 1898764 - | inorganic pyrophosphatase TERM 1483 1899384 - 1899407 + r 76 -6.8 -4.60746 | TTTTAAGTTTATTCT GCATCATAAT CATC ATTATGCTGC TTTTCATATTTTTCA dksA 1899808 - 1899377 - | dnaK suppressor protein homolog TERM 1484 1899826 - 1899847 + r 71 -3.9 -5.14949 | overlap 1899827 TGCACTATATTATTT TTTAATTAA CCAC TTAATTAAG TTTTATTATTTTGTT xerC 1900781 - 1899843 - | integrase/recombinase XerC TERM 1485 1900094 - 1900106 + g 79 -4.8 -5.19916 | opp_overlap 1900094 AATGTCGACCAAAAA CTGC TGGCT GCAG TTTTTTCCCTCTTTT thdF 1902150 - 1900807 - | tRNA modification GTP-binding protein ThdF (TrmE) TERM 1486 1904573 - 1904590 + G 72 -7.1 -3.88559 | TACTCAGAACAATGT TAGCTTT AGTT AAAGCTA TTTCTAGAACTAATT TERM 1487 1905714 - 1905696 - g 83 -10.4 -3.0972 | overlap 1905693 AGATAAATCAAATGA TGCATTAC GCT GTAATGCA AAAGATATATCAGCG OTT_1868 1902232 - 1907157 + | NAD-glutamate dehydrogenase TERM 1488 1907425 - 1907413 - f 75 -3.3 -5.39721 | TGAGTATAGAAAAAA GCAAC AAT GGTGC GTGTATATAAGATTA OTT_1869 1908088 - 1908570 + | transposase TERM 1489 1908590 - 1908600 + T 70 -5.4 -4.53705 | TACTTTGGATTACCT GGAA TAA TTCC TTTTATCTGAGAGTT abcT3 1910355 - 1908574 - | ABC transporter ATP-binding protein TERM 1490 1910189 - 1910201 + g 75 -4.9 -5.09685 | GGACTATTAGCTATG TTGAT ATA ATCAA TTATTTTTTTTTGCA pyrH 1911157 - 1910405 - | uridylate kinase mraY 1912476 - 1911385 - | phospho-N-acetylmuramoyl-pentapeptide- transferase murF 1913875 - 1912466 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase TERM 1491 1913309 - 1913294 - G 72 -3.3 -5.28481 | opp_overlap 1913294 TAGTGAATTAAAAAA TTCAG TATGAG CTGAA TTAATATTAGTAAGT murE 1915341 - 1913872 - | UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase ftsI 1917079 - 1915328 - | penicillin-binding protein PbpA2 OTT_1876 1917691 - 1917383 - | hypothetical protein mraW 1918622 - 1917684 - | S-adenosyl-methyltransferase MraW TERM 1492 1918088 - 1918112 + g 86 -2.2 -6.48081 | CTCTAATTATATTGG CTAATTGCAG AGTAG TTGTAATTGG TTTTTTTTTTCTGGC TERM 1493 1918570 - 1918584 + g 72 -8.6 -3.03525 | overlap 1918569 TCATTGTCTACTGGA GCTAAG TAA CTTAGC ATTTCTGTAGCTAGC dnaJ 1919824 - 1918691 - | dnaJ protein TERM 1494 1918857 - 1918875 + g 80 -10.4 -2.7464 | opp_overlap 1918860, overlap 1918856 TTTCCACAGCGATCA GAATGCAA AAT TTGCATTC CTTTACCACTAAGTT TERM 1495 1919464 - 1919484 + g 79 -6.9 -4.72986 | overlap 1919466 ATTTTAAATTAGCTC CAGCTTTTT TAG AAAAAGCAG TTTTTGATGAACGTC TERM 1496 1919901 - 1919867 - R 88 -9.6 -4.24786 | opp_overlap 1919878, overlap 1919863 1919870 TTTATAATATATAAA CAATTTACTAATACTA TAA TAGTATTAGTAAATCT AGAGTAATTTATTAC TERM 1497 1919898 - 1919870 - R 100 -13.5 -4.22858 | opp_overlap 1919878, overlap 1919863 1919867 ATAATATATAAACAA TTTACTAATACTA TAA TAGTATTAGTAAA TCTAGAGTAATTTAT dnaK 1921841 - 1919913 - | dnaK protein TERM 1498 1921176 - 1921187 + g 72 -5.8 -4.42238 | ACCAAGAAATGTATC GCCA TTAG TGGC TTTTACTTCAACTAC bolA 1922509 - 1922222 - | BolA protein homolog fabI 1922716 - 1923513 + | enoyl-[acyl carrier protein] reductase OTT_1882 1925329 - 1924190 - | reverse transcriptase OTT_1883 1925313 - 1925612 + | hypothetical protein OTT_1884 1925869 - 1926150 + | hypothetical protein OTT_1885 1926963 - 1926154 - | N6 adenine-specific DNA-methyltransferase TERM 1499 1927045 - 1927055 + H 81 -3.2 -5.76633 | GCCAGTAATAATAAC GCTT ACA AGGC TTTTTTTATGTATCC OTT_1886 1927339 - 1928067 + | hypothetical protein TERM 1500 1928789 - 1928779 - g 71 -5.4 -4.68724 | opp_overlap 1928779 1928777 TTAGGGAATATAAAA GCTA AAT TAGC TGATTTTGAGTTGGT OTT_1887 1928089 - 1928946 + | hypothetical protein OTT_1888 1929047 - 1929247 + | RelA/SpoT-related protein OTT_1889 1929734 - 1929435 - | hypothetical protein OTT_1890 1929718 - 1930857 + | reverse transcriptase TERM 1501 1931334 - 1931317 - g 79 -2.7 -5.89921 | AGGATAATAAAAAAA TCAGTTC TAGA GAAATGA TTCAAACATTTTATA OTT_1891 1931142 - 1931549 + | RelA/SpoT-related protein OTT_1892 1931671 - 1932573 + | hypothetical protein OTT_1893 1933096 - 1932641 - | putative conjugative transfer protein TraD TERM 1502 1933024 - 1933052 + g 87 -5.3 -5.52384 | GTTCTTTAATTTTAA GGTTAACCTCATC CAT GATTAGCTTAGCC TTTTTTTGCTGAAGA OTT_1894 1933373 - 1933675 + | putative conjugative transfer protein TraA OTT_1895 1933705 - 1934796 + | putative conjugative transfer protein TraA OTT_1896 1934783 - 1934944 + | putative conjugative transfer protein TraA OTT_1897 1934982 - 1935533 + | putative conjugative transfer protein TraI TERM 1503 1935936 - 1935910 - g 79 -2.5 -5.82036 | gap 1 ATAAGAAAGAAAAAA CTAAATTAC-CA TTAG TGTATAATTTAG TGATCTACAACGGCA TERM 1504 1936117 - 1936167 + G 100 -13.3 -2.84098 | opp_overlap 1936117 1936121, overlap 1936121 1936124 1936127 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA TERM 1505 1936167 - 1936117 - g 100 -13.3 -4.84262 | opp_overlap 1936117 1936121 1936124 1936127, overlap 1936121 TAAGAATCAAGAAAA GAAATAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTATTTC TGATTGATTAAAACA OTT_1898 1935585 - 1936145 + | putative transposase TERM 1506 1936121 - 1936163 + T 80 -8.3 -4.10331 | opp_overlap 1936117 1936121, overlap 1936117 1936124 1936127 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA TERM 1507 1936163 - 1936121 - T 91 -8.3 -4.91657 | opp_overlap 1936121 1936117 1936124 1936127, overlap 1936117 AATCAAGAAAAGAAA TAATAATTTTATAAAAA AGATGTAAG TTTTTATAAAATTATTA TTTCTGATTGATTAA OTT_1899 1937129 - 1936161 - | transposase TERM 1508 1936523 - 1936498 - G 70 -4.1 -5.02476 | gap 1, opp_overlap 1936498 ATATCTGCTAAAAAA GCAAGAACTACA GCC TGT-GTTTTTGC TCCTATGCCTGGTAT TERM 1509 1936669 - 1936685 + g 73 -8.1 -3.54574 | overlap 1936666 TTATTAGCAATTGCT TTAGAAG CTC CTTCTAA TCTATTTGTTTCTTG OTT_1900 1937340 - 1937630 + | hypothetical protein TERM 1510 1937651 - 1937618 - T 73 -5.5 -4.67173 | opp_overlap 1937619, overlap 1937620 TAATGTAAAAAATAA CATGGATTATTAACT TTTA AATTAATAATCCACT AACTTAAGTTTTTTG TERM 1511 1937649 - 1937620 - T 91 -10.3 -3.92369 | opp_overlap 1937619, overlap 1937618 ATGTAAAAAATAACA TGGATTATTAACT TTTA AATTAATAATCCA CTAACTTAAGTTTTT ndk 1938428 - 1938003 - | nucleoside diphosphate kinase TERM 1512 1939102 - 1939112 + H 71 -4 -5.09204 | TCTAAACTCTTGTAT TCAA ATA TTGA TTTTTATTCAACTCT TERM 1513 1939240 - 1939226 - H 75 -8.6 -3.40382 | opp_overlap 1939218, overlap 1939218 1939213 TATTAAACCGTATAA CGGTTT AGC AAACCG CCGCCTTAAGCCTCT TERM 1514 1939516 - 1939501 - H 71 -7.6 -3.56318 | opp_overlap 1939500, overlap 1939486 1939499 TTGCTAATAATAACA GTAGCA ATAA TGCTAC AATATTTTATAACTT TERM 1515 1939846 - 1939828 - H 71 -4.6 -4.82901 | overlap 1939830 TTCCTTGCATAAAAA TTCTGAAA AAT TTTCAGCA CTATAGTGAAAAAGG TERM 1516 1939917 - 1939936 + H 74 -5 -5.00884 | opp_overlap 1939918, overlap 1939918 TCCAACCTGAAAGAA ATTTCAGG TCAA CCTGAAAC TTTTTTCAGGGACAT TERM 1517 1939935 - 1939918 - H 83 -8.5 -4.46233 | opp_overlap 1939918 1939917 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1518 1939918 - 1939935 + H 76 -8.5 -3.60048 | opp_overlap 1939918, overlap 1939917 CCAACCTGAAAGAAA TTTCAGG TCAA CCTGAAA CTTTTTTCAGGGACA TERM 1519 1940323 - 1940301 - H 71 -4.2 -5.14965 | overlap 1940302 1940303 ATTTTTACGAAAAAA CTTGCTTTTT CAA AAAAAGCATA CAACAGATTGTTTTT TERM 1520 1940321 - 1940303 - H 74 -9 -2.80472 | overlap 1940302 1940301 TTTTACGAAAAAACT TGCTTTTT CAA AAAAAGCA TACAACAGATTGTTT TERM 1521 1940930 - 1940918 - g 84 -3.4 -5.82172 | ATTAATAGAAAAAAA TCCA GCTAA TGGA ATAAAAATTCATAAA OTT_1902 1940379 - 1941518 + | putative integrase OTT_1903 1941521 - 1941991 + | peroxiredoxin, AhpC/TSA family protein OTT_1904 1942059 - 1942394 + | hypothetical protein OTT_1905 1942394 - 1942945 + | putative conjugative transfer protein TraE OTT_1906 1942942 - 1943418 + | hypothetical protein OTT_1907 1943783 - 1944112 + | hypothetical protein OTT_1908 1944431 - 1945249 + | putative conjugative transfer protein TraB OTT_1909 1945299 - 1945481 + | putative conjugative transfer protein TraB OTT_1910 1945481 - 1945810 + | hypothetical protein OTT_1912 1948502 - 1947492 - | ankyrin repeat-containing protein 06_04 OTT_1911 1945791 - 1947593 + | putative conjugative transfer protein TraC OTT_1913 1948657 - 1949244 + | putative conjugative transfer protein TraU OTT_1914 1949267 - 1949650 + | putative conjugative transfer protein TrbC TERM 1522 1950365 - 1950348 - g 79 -3.5 -5.59357 | ATTACATGAAAAAAA TGAAATA TGTA TACTTCA CTATGACTACAGAGA OTT_1915 1949647 - 1951341 + | putative conjugative transfer protein TraN TERM 1523 1951436 - 1951474 + F 95 -12.2 -3.06162 | opp_overlap 1951436 1951438 1951441 1951447, overlap 1951434 1951438 1951441 1951445 1951447 ACTCATATTTTAATA TATAATAAATATATACAT TTT ATGTGTATGTTTATTATA TATTAAAATAGGGTG TERM 1524 1951438 - 1951472 + F 84 -10.4 -3.08813 | opp_overlap 1951438 1951436 1951441 1951447, overlap 1951434 1951436 1951441 1951445 1951447 TCATATTTTAATATA TAATAAATATATACAT TTT ATGTGTATGTTTATTA TATATTAAAATAGGG TERM 1525 1951441 - 1951469 + F 71 -7.7 -3.68738 | opp_overlap 1951438 1951436 1951441 1951447, overlap 1951434 1951438 1951436 1951445 1951447 TATTTTAATATATAA TAAATATATACAT TTT ATGTGTATGTTTA TTATATATTAAAATA OTT_1916 1951498 - 1952676 + | ankyrin repeat-containing protein 04_02 OTT_1917 1952880 - 1953602 + | putative conjugative transfer protein TraF OTT_1918 1953599 - 1953745 + | putative conjugative transfer protein TraH OTT_1919 1953827 - 1954492 + | putative conjugative transfer protein TraH OTT_1920 1954506 - 1954901 + | putative conjugative transfer protein TraH OTT_1921 1954901 - 1955236 + | putative conjugative transfer protein TraG TERM 1526 1955867 - 1955851 - g 73 -8.1 -3.54574 | overlap 1955860 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 1527 1956013 - 1956038 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 1956013 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_1922 1955413 - 1956375 + | transposase TERM 1528 1956419 - 1956369 - T 100 -13.3 -2.84098 | opp_overlap 1956369 1956373, overlap 1956373 1956376 1956379 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1529 1956369 - 1956419 + T 100 -13.3 -4.84262 | opp_overlap 1956369 1956373 1956376 1956379, overlap 1956373 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1530 1956415 - 1956373 - T 80 -8.3 -4.10331 | opp_overlap 1956369 1956373, overlap 1956369 1956376 1956379 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1531 1956373 - 1956415 + T 91 -8.3 -4.91657 | opp_overlap 1956373 1956369 1956376 1956379, overlap 1956369 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_1923 1956951 - 1956391 - | putative transposase TERM 1532 1956600 - 1956626 + g 79 -2.5 -5.82036 | gap 1 TGCCGTTGTAGATCA CTAAATTATACA CTAA TG-GTAATTTAG TTTTTTCTTTCTTAT OTT_1924 1958208 - 1957003 - | putative conjugative transfer protein TraI TERM 1533 1959217 - 1959199 - g 83 -6 -5.18409 | CAAAAGAAAAACAAA CTTTCTGA TAA TCAGATAG GCAGTATTAACAGTA OTT_1925 1958389 - 1959453 + | hypothetical protein TERM 1534 1959681 - 1959701 + T 74 -6.2 -4.55491 | TTACAAACATCACTG TGAGCTGT TATGT ATAGCTCA TTTTGTAATTCGCTC OTT_1926 1960581 - 1959757 - | putative conjugative transfer protein TraA OTT_1927 1962608 - 1960596 - | putative conjugative transfer protein TraA OTT_1928 1962887 - 1963342 + | putative conjugative transfer protein TraD OTT_1929 1964432 - 1963410 - | hypothetical protein TERM 1535 1964560 - 1964531 - R 74 -8.7 -3.30214 | opp_overlap 1964539 AATTCACTACATTAA CCACCTATTAAAC TTTA GTTTATTAGGTAG CATAAAGCTCACAGT OTT_1930 1965128 - 1964553 - | RelA/SpoT-related protein OTT_1931 1965547 - 1965149 - | hypothetical protein OTT_1932 1966297 - 1965569 - | hypothetical protein OTT_1933 1966664 - 1966963 + | N6 adenine-specific DNA-methyltransferase OTT_1934 1968248 - 1967373 - | transposase OTT_1935 1969522 - 1968356 - | hypothetical protein OTT_1936 1970797 - 1969541 - | ankyrin repeat-containing protein 07_03 OTT_1937 1972062 - 1972169 + | transposase OTT_1938 1972147 - 1972455 + | transposase OTT_1939 1974468 - 1972696 - | aminopeptidase lig 1976564 - 1974465 - | DNA ligase TERM 1536 1975508 - 1975525 + g 77 -7.7 -4.09243 | opp_overlap 1975503 GGATAAGCCATGCTA CAGGAGT AACA GCTCCTG TTTTGCCAACCTGTA codA 1977095 - 1976628 - | cytosine deaminase OTT_1942 1978068 - 1977151 - | Co/Zn/Cd cation transporter protein p34 OTT_1943 1978348 - 1979145 + | hypothetical protein TERM 1537 1980182 - 1980196 + T 90 -3.6 -5.9663 | ATTCTAATTTGTGTT TCTATT AAA AATGGA TTTTTTTTGATGTTT OTT_1944 1980794 - 1980246 - | thioredoxin-like protein grlA 1981185 - 1980832 - | glutaredoxin-like protein GrlA nth 1981262 - 1981900 + | endonuclease III TERM 1538 1982195 - 1982219 + G 72 -5.1 -4.82901 | opp_overlap 1982199 AGCAGCTTGGACTTA CTAATCAAGAT ACT ATCTTAATTGG TTTTTCTCAAGGAGC OTT_1947 1981897 - 1982529 + | putative serine esterase TERM 1539 1985566 - 1985577 + G 74 -3 -5.38549 | TTATGCTAAGTATGC TCAT CCAT ATGA TTTTTATTCTTTAAG aas 1982849 - 1986322 + | 2-acylglycerophosphoethanolamine acyltransferase TERM 1540 1986345 - 1986358 + T 85 -3.1 -5.9873 | AAATCACTACTATCA CTTGC ACTT GTAAG TTTTTTTTATAATAA OTT_1949 1987589 - 1987218 - | replicative DNA helicase TERM 1541 1987464 - 1987494 + g 100 -12.1 -4.98522 | gap 1, opp_overlap 1987464 ATCTTGTTCAATGGA GCCTGATTCTCTCA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT TERM 1542 1987494 - 1987464 - G 87 -12.1 -2.52543 | gap 1, opp_overlap 1987464 ATCTTGTTCAATGGA GCCTGATTCTCTCA GATC TGAGAGAAT-AGGC TTTTTATCTGACCTT TERM 1543 1988430 - 1988414 - g 71 -2.3 -5.38951 | overlap 1988421 AAGGTATACAAAAAA TTCACAA TAA TTCTGAA TTACCAAAGAAAAAA TERM 1544 1988493 - 1988457 - g 79 -4.7 -5.30199 | opp_overlap 1988460 1988465 1988469, overlap 1988458 1988459 AAAAAGCAAGAAAAA TCCTTTAACTAATTTTA TGT TAAAATTAGTTAAATAT ACTTGAAACCAACCT TERM 1545 1988492 - 1988458 - g 75 -8.2 -3.74459 | opp_overlap 1988460 1988465 1988469, overlap 1988457 1988459 AAAAGCAAGAAAAAT CCTTTAACTAATTTTA TGT TAAAATTAGTTAAATA TACTTGAAACCAACC TERM 1546 1988491 - 1988459 - g 75 -9.5 -2.82235 | opp_overlap 1988460 1988465 1988469, overlap 1988458 1988457 AAAGCAAGAAAAATC CTTTAACTAATTTTA TGT TAAAATTAGTTAAAT ATACTTGAAACCAAC TERM 1547 1988460 - 1988490 + G 100 -13 -2.90075 | opp_overlap 1988459 1988458 1988457, overlap 1988465 1988469 AAGCAAGAAAAATCC TTTAACTAATTTTA TGT TAAAATTAGTTAAA TATACTTGAAACCAA TERM 1548 1988465 - 1988485 + G 72 -8.5 -3.16267 | opp_overlap 1988459 1988458 1988457, overlap 1988460 1988469 AGAAAAATCCTTTAA CTAATTTTA TGT TAAAATTAG TTAAATATACTTGAA OTT_1950 1988296 - 1988499 + | transposase rnc 1989429 - 1988689 - | ribonuclease III TERM 1549 1989457 - 1989483 + r 70 -6 -4.2757 | opp_overlap 1989455 1989457 1989461, overlap 1989461 TATTTATATTAAATA TTAAGTACATTT GTC AAATGTACTCGA TTATATTTTTTTCAA TERM 1550 1989461 - 1989479 + r 73 -9 -2.7365 | opp_overlap 1989461 1989457 1989455, overlap 1989457 TATATTAAATATTAA GTACATTT GTC AAATGTAC TCGATTATATTTTTT TERM 1551 1989479 - 1989461 - R 79 -9 -3.4934 | opp_overlap 1989457 1989461, overlap 1989457 1989455 TATATTAAATATTAA GTACATTT GTC AAATGTAC TCGATTATATTTTTT lepB 1990224 - 1989484 - | signal peptidase I OTT_1953 1990790 - 1991665 + | transposase sdhB 1993062 - 1992277 - | succinate dehydrogenase iron-sulfur protein sdhA 1994884 - 1993097 - | succinate dehydrogenase flavoprotein subunit sdhD 1995468 - 1995079 - | succinate dehydrogenase hydrophobic membrane anchor protein sdhC 1995882 - 1995499 - | succinate dehydrogenase cytochrome b-556 subunit TERM 1552 1997519 - 1997503 - g 73 -8.1 -3.54574 | overlap 1997512 CAAGAAACAAATAGA TTAGAAG GAG CTTCTAA AGCAATTGCTAATAA TERM 1553 1997665 - 1997690 + G 70 -4.1 -5.02476 | gap 1, opp_overlap 1997665 ATACCAGGCATAGGA GCAAAAAC-ACA GGC TGTAGTTCTTGC TTTTTTAGCAGATAT OTT_1958 1997059 - 1998027 + | transposase TERM 1554 1998071 - 1998021 - T 100 -13.3 -2.84098 | opp_overlap 1998021 1998025, overlap 1998025 1998028 1998031 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1555 1998021 - 1998071 + T 100 -13.3 -4.84262 | opp_overlap 1998021 1998025 1998028 1998031, overlap 1998025 TGTTTTAATCAATCA GAAATAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTATTTC TTTTCTTGATTCTTA TERM 1556 1998067 - 1998025 - T 80 -8.3 -4.10331 | opp_overlap 1998021 1998025, overlap 1998021 1998028 1998031 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT TERM 1557 1998025 - 1998067 + T 91 -8.3 -4.91657 | opp_overlap 1998025 1998021 1998028 1998031, overlap 1998021 TTAATCAATCAGAAA TAATAATTTTATAAAAA CTTACATCT TTTTTATAAAATTATTA TTTCTTTTCTTGATT OTT_1959 1998867 - 1998151 - | hypothetical protein TERM 1558 1998221 - 1998237 + g 72 -7.3 -3.80858 | opp_overlap 1998217 1998221 ACTTTGAACAATATA GAGTTAG ATC CTAGCTC TTTACTAAGTTCTGA TERM 1559 1998800 - 1998814 + g 74 -8.6 -3.25459 | opp_overlap 1998797 1998793, overlap 1998798 CTACTAGACATACGT TGCAGT ATA ACTGCA TCTTCTGGCATTAGT OTT_1960 1999073 - 1998843 - | hypothetical protein TERM 1560 1999257 - 1999277 + r 95 -9.1 -5.08011 | TCTCCTTTTGTTTCT TTTTCAGTG AAA CGCTGAAAA TTTTTTAGAAGTTTT TERM 1561 1999310 - 1999322 + r 100 -6.3 -6.22691 | ACATGGAACATTACG CAACT TAA AGTTG TTTTTTTTATTATTG OTT_1961 1999662 - 1999291 - | hypothetical protein TERM 1562 1999644 - 1999597 - G 85 -8 -4.71401 | opp_overlap 1999601 1999602, overlap 1999599 1999601 1999602 1999635 AATAAAACGATAAAA GACAGTTGCATAATTGCTACTA TTGT TATTAGCAATTATGCAATTATT GCTTGCAAAATTACG TERM 1563 1999642 - 1999599 - G 89 -10.6 -3.9392 | opp_overlap 1999601 1999602, overlap 1999597 1999601 1999602 1999635 TAAAACGATAAAAGA CAGTTGCATAATTGCTACTA TTGT TATTAGCAATTATGCAATTA TTGCTTGCAAAATTA TERM 1564 1999640 - 1999601 - G 87 -11 -3.52813 | opp_overlap 1999601 1999602, overlap 1999599 1999597 1999602 1999635 AAACGATAAAAGACA GTTGCATAATTGCTACTA TTGT TATTAGCAATTATGCAAT TATTGCTTGCAAAAT TERM 1565 1999639 - 1999602 - G 100 -14.5 -2.70061 | opp_overlap 1999601 1999602, overlap 1999601 1999599 1999597 1999635 AACGATAAAAGACAG TTGCATAATTGCTACTA TTGT TATTAGCAATTATGCAA TTATTGCTTGCAAAA TERM 1566 1999602 - 1999639 + g 100 -14.5 -3.81146 | opp_overlap 1999602 1999601 1999599 1999597 1999635, overlap 1999601 AACGATAAAAGACAG TTGCATAATTGCTACTA TTGT TATTAGCAATTATGCAA TTATTGCTTGCAAAA OTT_1962 2003990 - 1999884 - | hypothetical protein TERM 1567 2003278 - 2003291 + g 70 -3.9 -4.98352 | overlap 2003285 ATTCTTGTTAAACTT TCTTT AGTT AAAGA TTTATTTTCTTTAAT TERM 1568 2003860 - 2003842 - G 80 -8.9 -3.66646 | opp_overlap 2003829 2003842, overlap 2003829 AAGACTTGATGTAAA GTCTGCT TAAGC AGCAGAC TTTCATTTAGTGCAA TERM 1569 2003842 - 2003860 + g 85 -8.9 -4.10552 | opp_overlap 2003829 2003842, overlap 2003829 AAGACTTGATGTAAA GTCTGCT TAAGC AGCAGAC TTTCATTTAGTGCAA TERM 1570 2004183 - 2004131 - R 76 -6.8 -4.50943 | opp_overlap 2004136 2004139 2004142, overlap 2004136 GAATAAGGCAGAAAA CTAAATAAGAAGTTTATAAAAA GAATGTCGG TTTTTATAAACTTCTTATTTCT GAAAAATTGAAACAT TERM 1571 2004178 - 2004136 - R 95 -11.1 -4.27483 | opp_overlap 2004136 2004139 2004142, overlap 2004131 AGGCAGAAAACTAAA TAAGAAGTTTATAAAAA GAATGTCGG TTTTTATAAACTTCTTA TTTCTGAAAAATTGA TERM 1572 2004136 - 2004178 + r 93 -11.1 -3.87869 | opp_overlap 2004136 2004131, overlap 2004139 2004142 AGGCAGAAAACTAAA TAAGAAGTTTATAAAAA GAATGTCGG TTTTTATAAACTTCTTA TTTCTGAAAAATTGA TERM 1573 2004139 - 2004175 + r 80 -8.4 -4.06687 | opp_overlap 2004136 2004131, overlap 2004136 2004142 CAGAAAACTAAATAA GAAGTTTATAAAAA GAATGTCGG TTTTTATAAACTTC TTATTTCTGAAAAAT TERM 1574 2004225 - 2004209 - R 76 -8.1 -3.74519 | overlap 2004196 AACATTGGCATCAAA TGAAGAA TTA TTCTTCA AAACACCATAAATAA OTT_1963 2004417 - 2004307 - | transposase cyaY 2005116 - 2005448 + | CyaY protein TERM 1575 2006413 - 2006425 + G 74 -7.7 -3.77832 | opp_overlap 2006412 TTATCAACAAACGAG CTCCA TAA TGGAG TTATTAAATTTAACA msbA2 2005432 - 2007168 + | multidrug resistance protein OTT_1966 2007701 - 2007817 + | transposase OTT_1967 2007829 - 2008209 + | transposase