TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.545925 %AT, 1952566 nt, 15594 terms. Intergenic: 0.605713 %AT, H2T: 132572 nt, 1121 terms; T2T: 43818 nt, 883 terms; H2H: 49800 nt, 803 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|145588189|ref|NC_009379.1| Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1, complete genome (length 2159490) Pnuc_0001 33 - 1460 + | chromosomal replication initiator protein DnaA TERM 1 2512 - 2500 - g 71 -3.4 -4.86033 | AAAGGGCCACAAAAA TACC TTAGT GGTA GGTCGTGATGCATTA Pnuc_0002 1724 - 2839 + | DNA polymerase III subunit beta Pnuc_0003 2851 - 5349 + | DNA gyrase, B subunit TERM 2 5385 - 5373 - g 93 -9.1 -4.86862 | TCTAAAAAATTAAAA CCACC AAA GGTGG ACCGATCTTCTATTG Pnuc_0004 5352 - 5846 + | nuclear protein SET Pnuc_0005 5855 - 6079 + | hypothetical protein TERM 3 6509 - 6519 + G 85 -5.4 -5.42259 | TGCAGCGAGGATTGG GAAC AGA GTTC TTTTTTTGGAAATCC Pnuc_0006 6181 - 6942 + | ABC transporter related TERM 4 6981 - 6996 + G 76 -7.6 -4.22652 | AACTTAGAGTCTTGG TATGGG GAGT CCCATA TTTTGCATGGTGTGA Pnuc_0007 6939 - 7643 + | ABC transporter related TERM 5 7696 - 7706 + G 74 -8.2 -3.93369 | ACTTTGATTTCTATT GCGG CTG CCGC TTTGGTTGCAGTTGC Pnuc_0008 7672 - 8874 + | extracellular ligand-binding receptor TERM 6 8905 - 8946 + G 100 -11.8 -4.40804 | opp_overlap 8919 GGCCTCTCTAGTTCC GCT-CTGTTAAGCCAGCTCC TTTT GGGGCTGG-TTAACGGCAGC TTTTATGCAATCCTA Pnuc_0009 8878 - 9762 + | inner-membrane translocator TERM 7 10168 - 10180 + G 70 -4.8 -4.50761 | opp_overlap 10168 ATGGTTTCCAAGGCA TCCC GAGAG GGGA TTTATTTGGGTTGAT Pnuc_0010 9759 - 10715 + | inner-membrane translocator Pnuc_0011 11734 - 10721 - | aminoglycoside phosphotransferase Pnuc_0012 12512 - 11742 - | short-chain dehydrogenase/reductase SDR TERM 8 11925 - 11914 - G 86 -4.4 -5.4833 | TCACTTAATAAAAAA TCTC GATT GAGA TCGGTAATAACATAG TERM 9 12461 - 12475 + g 71 -3.5 -4.78237 | overlap 12467 TGCCGCTAGACGCAC CCGTT ATAAA AGCGG TTTTATTATCCAATC Pnuc_0013 13759 - 12512 - | acyl-CoA dehydrogenase domain-containing protein Pnuc_0014 13784 - 14575 + | hypothetical protein TERM 10 14582 - 14613 + F 80 -2.4 -5.61824 | opp_overlap 14582 TTGAATTAAATCATA TACTTATAAAGCAA CCGA TTGTTTTACTAGTA TTTTTTTGGGTTTTG TERM 11 16124 - 16092 - g 72 -6.4 -4.36914 | gap 1 GTCTTTTGCAGAAAA CAGG-AAGCTGTTTC ACGT GAAACATCTCGCCTG AAGGATATTTGGGTT Pnuc_0015 14682 - 16601 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 12 17010 - 16996 - g 81 -8.6 -4.53163 | TGATAGAGTAGAAAA TGTTGC ATT GCAACA ATCTGGGCAATTTGA Pnuc_0016 16598 - 17266 + | methyltransferase GidB Pnuc_0017 17284 - 18054 + | cobyrinic acid a,c-diamide synthase Pnuc_0018 18075 - 18965 + | parB-like partition protein TERM 13 19159 - 19140 - g 76 -4.2 -5.00616 | CTGCGCTGCAAAAAA GCGATGCT AGCA AGTACCGC GCCCTATCTCCTTGG Pnuc_0019 19034 - 19528 + | putative ATP synthase protein I AtpI TERM 14 19667 - 19648 - g 75 -6.4 -4.43844 | overlap 19649 TGAGCATTTACAAAA TCTCACCA GCAC TGGTGAGC ATCAATCATCCATCG TERM 15 19666 - 19649 - g 71 -9.9 -3.25824 | overlap 19648 GAGCATTTACAAAAT CTCACCA GCAC TGGTGAG CATCAATCATCCATC Pnuc_0020 19568 - 20443 + | F0F1 ATP synthase subunit A Pnuc_0021 20489 - 20755 + | F0F1 ATP synthase subunit C Pnuc_0022 20819 - 21289 + | ATP synthase F0, B subunit Pnuc_0023 21291 - 21827 + | ATP synthase F1, delta subunit TERM 16 22700 - 22726 + G 70 -9.3 -3.40522 | TCAAATCTCCTTGTT GCTCCGCCGCC CACCA GGCCGCGAAGC TTATCCTGGCGACGT Pnuc_0024 21873 - 23414 + | F0F1 ATP synthase subunit alpha Pnuc_0025 23432 - 24301 + | ATP synthase F1, gamma subunit Pnuc_0026 24357 - 25757 + | F0F1 ATP synthase subunit beta Pnuc_0027 25779 - 26195 + | ATP synthase F1, epsilon subunit TERM 17 27175 - 27194 + G 77 -11.4 -3.23899 | overlap 27171 ATGATTTGGCGAGCG CTCCGCCT CTGA AGGCGGGG TTGCATTCATTGGAC Pnuc_0028 26211 - 27320 + | uroporphyrinogen decarboxylase Pnuc_0029 27590 - 29719 + | primosomal protein N' Pnuc_0030 30142 - 29729 - | glycine cleavage system H protein Pnuc_0031 30204 - 30848 + | beta-lactamase domain-containing protein TERM 18 30837 - 30824 - T 74 -5.2 -4.67651 | AGAGCGCAAAACAAA CCCC TACGTT GGGG ATGGCGCTTGATACA TERM 19 31052 - 31091 + T 70 -5.8 -4.3898 | TAGTCATGGGCAATC CGGGTAAGGCAAATCTTT ATAC AGAGATCTATTTTACCCG TTTTGTCCCGCTGGT Pnuc_0032 32125 - 31085 - | fatty acid desaturase Pnuc_0033 32491 - 32994 + | cytochrome c, class I TERM 20 33009 - 33039 + T 100 -15.7 -5.09245 | opp_overlap 33016, overlap 33016 AGTTTTTCTTATTCA TAAAAAAGCTGGC TACAT GCCAGCTTTTTTA TTTTTCTAGTTTTGC TERM 21 33032 - 33016 - T 100 -9.4 -5.28176 | opp_overlap 33009 33016 CTTATTCATAAAAAA GCTGGC TACAT GCCAGC TTTTTTATTTTTCTA TERM 22 33016 - 33032 + T 100 -9.4 -5.98675 | opp_overlap 33016, overlap 33009 CTTATTCATAAAAAA GCTGGC TACAT GCCAGC TTTTTTATTTTTCTA Pnuc_0034 33933 - 33037 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 23 33444 - 33454 + g 72 -8.2 -3.73684 | opp_overlap 33442 33444, overlap 33442 AAATATCAAACAACA GCGC ATC GCGC TCTTTAGTTTTATGT Pnuc_0035 34010 - 34642 + | phosphoheptose isomerase TERM 24 35276 - 35257 - g 75 -2.8 -5.1356 | overlap 35258 TCCGAGCAAGAAAAA GCTCGCTT AGAG AAGCAAGG TAAAGCCGATGAGTC Pnuc_0036 34672 - 35322 + | transport-associated TERM 25 35340 - 35324 - f 76 -6.7 -4.38843 | opp_overlap 35324 CAAAATATCAATAAA TTTTCAA AGT TTGAAAA TGATTGCAAGTAGAG TERM 26 35353 - 35390 + G 100 -9.3 -5.67063 | gap 1, opp_overlap 35353 AAATGATTGCAAGTA GAGCGGGCACAA-AAGTA TTT TATTTATTGGGCCTGCTC TTTTTTTATACTCAA TERM 27 35472 - 35459 - g 70 -2.3 -5.09259 | opp_overlap 35460, overlap 35460 GATTGCAAAACAAAA TGCCT GCTT AGGCT GTCATGCAGTGAATA Pnuc_0037 35340 - 35693 + | cytochrome c, class I Pnuc_0038 36346 - 35690 - | GCN5-related N-acetyltransferase TERM 28 35740 - 35750 + g 70 -2.4 -5.07652 | ACCAGGCTTGATTAG CCAG CTT CAGG TTTTCTTTTAGGGCG TERM 29 36223 - 36205 - G 74 -10.2 -3.17075 | opp_overlap 36215 GTGTTCCGAAGCGAA GGCGTCGA TCT TCGTCGCC GAGCTTTAAAAGATG TERM 30 38567 - 38551 - H 76 -10.9 -2.62616 | opp_overlap 38545 38541 TCAGCTGGGAGAGCA CCTGCTT TGC AAGCAGG GGGTCGTCGGTTCGA TERM 31 38610 - 38649 + H 93 -12.4 -3.99444 | opp_overlap 38610 38618, overlap 38618 CCACCATCATCTAAA TGTCAAAACTAAGCGATC TAAT GATTGTTTAGTTTTGCCA TTTATGGCTGTTCTT TERM 32 38649 - 38610 - H 70 -8 -3.69323 | opp_overlap 38610 38618, overlap 38618 CCACCATCATCTAAA TGTCAAAACTAAGCGATC TAAT GATTGTTTAGTTTTGCCA TTTATGGCTGTTCTT TERM 33 38618 - 38641 + H 73 -6.8 -4.26189 | opp_overlap 38610 38618, overlap 38610 ATCTAAATGTCAAAA CTAAGCGATC TAAT GATTGTTTAG TTTTGCCATTTATGG TERM 34 39362 - 39351 - H 76 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 35 41838 - 41811 - H 80 -10 -3.65529 | overlap 41813 ACATGCTTACTCAAA TAGAGTTGTTGA TTTA TCAACAACTCAA CCCTCTACGCCCGGT TERM 36 41836 - 41813 - H 87 -12.6 -3.40775 | overlap 41811 ATGCTTACTCAAATA GAGTTGTTGA TTTA TCAACAACTC AACCCTCTACGCCCG TERM 37 41972 - 41997 + H 100 -16.2 -4.93365 | opp_overlap 41967 CGGGCACCAATGCGA CGCCCAGACC CTTTTA GGTCTGGGCG TTTTTACTTGTGCAA TERM 38 42292 - 42276 - H 76 -10.9 -2.62983 | opp_overlap 42267 CTCAGTGGTAGAGCA CTCCCTT GGT AAGGGAG AGGTCGGCAGTTCGA TERM 39 42315 - 42327 + H 80 -7.7 -4.33854 | CAGTTCGATCCTGCC CATGG GCA CCATG TTTGATTTTATTAAT TERM 40 42544 - 42525 - g 72 -5.8 -4.4078 | gap 1 GGTGGCGAAGCAAAA GCATACGAT CAG ATCG-ATGC TGCTCCTGAAGAAAA TERM 41 42590 - 42561 - g 88 -7.9 -5.06414 | overlap 42564 GCTCCTGAAGAAAAA GCACGCGGTATTA CGAT TAATACAGCGCAC GTTGAGTACGAGACT TERM 42 42671 - 42696 + G 89 -8.9 -4.70353 | overlap 42673 GAAGAACATGATTAC TGGCGCTGCCC AAAT GGACGGCGCTA TTTTGGTTTGTTCTG TERM 43 42673 - 42694 + G 77 -9.3 -3.94086 | overlap 42671 AGAACATGATTACTG GCGCTGCCC AAAT GGACGGCGC TATTTTGGTTTGTTC Pnuc_0039 42390 - 43580 + | elongation factor Tu TERM 44 43747 - 43723 - g 100 -7.8 -5.45652 | gap 1, opp_overlap 43722 43723 ACTCTGAAGAAAAAA GCGGCTGGGTC TCAG GACTC-GCCGC CTTAATCGTCGTTGC Pnuc_0040 43686 - 44063 + | preprotein translocase, SecE subunit Pnuc_0041 44073 - 44645 + | NusG antitermination factor TERM 45 44662 - 44652 - f 76 -6.8 -4.47118 | opp_overlap 44651 AAGATGTAAAAACAA GGAC TTA GTCC GGTTTTGCAGTGCAG TERM 46 45166 - 45153 - g 72 -3.1 -4.98531 | TCGCTAAAGCAAAAA TGCCA GATT TGACA GCAGCCGATATGGAT Pnuc_0042 44813 - 45244 + | ribosomal protein L11 rplA 45247 - 45948 + | 50S ribosomal protein L1 TERM 47 46017 - 45967 - f 89 -5.5 -5.4505 | gap 2, opp_overlap 45967 45966, overlap 45970 CCCTGTAACAAAAAA GAACTTTG--GGTCGACTCCCGCTC ATT GAGTGAGAGTCGAACATCAAAGACC GTTGGTGGATTAGTT TERM 48 46014 - 45970 - f 84 -8 -4.81306 | gap 2, opp_overlap 45967 45966, overlap 45967 TGTAACAAAAAAGAA CTTTG--GGTCGACTCCCGCTC ATT GAGTGAGAGTCGAACATCAAAG ACCGTTGGTGGATTA TERM 49 46150 - 46167 + F 93 -9.9 -4.87786 | CGCTGGTGTGTAACC CCAACTG GAAA CAGTTGG TTTTTATGGAGTTAA TERM 50 46712 - 46666 - g 79 -9.2 -4.10164 | GTAGCAGCACAGAAA GCCGCAGGAGCACCTGCTCCAG TAG CTGAAGTGGCAGCACCTGCAGC AGAAGCAGCAGCCCC TERM 51 46754 - 46717 - g 70 -9.1 -3.41051 | GCACCTGCAGCAGAA GCAGCAGCCCCAGCA GAAGTAGT TGCTGAAGCCGCAGC TCCTGAAGTAGCCGC Pnuc_0044 46186 - 46833 + | ribosomal protein L10 Pnuc_0045 46870 - 47244 + | ribosomal protein L7/L12 TERM 52 47288 - 47317 + F 100 -15.9 -4.17789 | opp_overlap 47313, overlap 47307 47313 GGGGCGTTGGCCATG TTGGGTTTGACCT CTAG AGGTCAAACCCGA TTTCATTTCTGATTG TERM 53 47307 - 47346 + F 100 -15.2 -3.41051 | opp_overlap 47313, overlap 47288 47313 47342 GTTTGACCTCTAGAG GTCAAACCCGATTTCATT TCTG ATTGAAATCGGGTTTGCC TTCTGATACGACTGC TERM 54 47313 - 47340 + F 90 -11.4 -3.82083 | opp_overlap 47313, overlap 47288 47307 CCTCTAGAGGTCAAA CCCGATTTCATT TCTG ATTGAAATCGGG TTTGCCTTCTGATAC TERM 55 47340 - 47313 - f 88 -11.4 -3.63627 | opp_overlap 47288 47313 47307 CCTCTAGAGGTCAAA CCCGATTTCATT TCTG ATTGAAATCGGG TTTGCCTTCTGATAC TERM 56 47679 - 47695 + G 70 -9.5 -3.07233 | opp_overlap 47671 47672, overlap 47681 CTAACAACGGCTATG CACGTAT GGA ATACGTG TCTTACCAGTTATCA TERM 57 48934 - 48914 - g 80 -9.7 -3.90744 | overlap 48915 CGTGCGGTTAAAGAA CGTCTCGGC CAA GCCGAAACA GAAAACCTCATGCCG TERM 58 48933 - 48915 - g 75 -11 -2.94232 | overlap 48914 GTGCGGTTAAAGAAC GTCTCGGC CAA GCCGAAAC AGAAAACCTCATGCC TERM 59 50383 - 50399 + G 73 -10.9 -2.64155 | overlap 50381 50380 CCAGTTACGTATTGT TGAAGGC GAT GCCTTCA TGCGTTTAGAAAAAC Pnuc_0046 47471 - 51571 + | DNA-directed RNA polymerase, beta subunit Pnuc_0047 51573 - 55835 + | DNA-directed RNA polymerase subunit beta' TERM 60 55846 - 55863 + F 95 -11.3 -5.07107 | opp_overlap 55856 GCTAATTTGGTAATT CTGGCCA GAAT TGGCCAG TTTTTTCCCCATTTG rpsL 56013 - 56393 + | 30S ribosomal protein S12 TERM 61 56910 - 56885 - g 82 -7.5 -4.57341 | opp_overlap 56885 56884 AAGCGCGGTGAAAAA TCGATGGCCCA ACGT TTGGCCAACGA ATTATTAGAAGCTGC Pnuc_0049 56543 - 57013 + | 30S ribosomal protein S7 Pnuc_0050 57041 - 59143 + | translation elongation factor G TERM 62 59348 - 59329 - g 72 -5.8 -4.4078 | gap 1 GGTGGCGAAGCAAAA GCATACGAT CAG ATCG-ATGC TGCTCCTGAAGAAAA TERM 63 59394 - 59365 - g 88 -7.9 -5.06414 | overlap 59368 GCTCCTGAAGAAAAA GCACGCGGTATTA CGAT TAATACAGCGCAC GTTGAGTACGAGACT TERM 64 59475 - 59500 + G 89 -8.9 -4.70353 | overlap 59477 GAAGAACATGATTAC TGGCGCTGCCC AAAT GGACGGCGCTA TTTTGGTTTGTTCTG TERM 65 59477 - 59498 + G 77 -9.3 -3.94086 | overlap 59475 AGAACATGATTACTG GCGCTGCCC AAAT GGACGGCGC TATTTTGGTTTGTTC Pnuc_0051 59194 - 60384 + | elongation factor Tu TERM 66 60434 - 60471 + F 73 -8.5 -3.74077 | gap 1, opp_overlap 60422, overlap 60436 60437 TATTTAGCGGTTTGC TAAC-CGGTGACATCAGT GCT GCTGATGTCACCGAGCTC TTTAGATGTATAACG TERM 67 60436 - 60469 + F 82 -11.1 -3.45231 | gap 1, overlap 60434 60437 TTTAGCGGTTTGCTA AC-CGGTGACATCAGT GCT GCTGATGTCACCGAGC TCTTTAGATGTATAA TERM 68 60437 - 60468 + F 95 -14.6 -2.66656 | gap 1, overlap 60436 60434 TTAGCGGTTTGCTAA C-CGGTGACATCAGT GCT GCTGATGTCACCGAG CTCTTTAGATGTATA Pnuc_0052 60518 - 60829 + | ribosomal protein S10 TERM 69 60882 - 60917 + F 91 -10.6 -4.4017 | opp_overlap 60881 60882 ATTTCGGGATAGAAT CTAAGGCTTCTCTCAA TTAT TTGGGAGAAATCTTAG TTTTATCAGCATTAA Pnuc_0053 61026 - 61682 + | ribosomal protein L3 Pnuc_0054 61694 - 62314 + | ribosomal protein L4/L1e rplW 62311 - 62625 + | 50S ribosomal protein L23 TERM 70 62666 - 62649 - g 74 -5.5 -4.70583 | opp_overlap 62650, overlap 62650 TTGATGAAGACAAAA CCGACCT CACC AGGTCGT CGTTCAATGGTGAAG TERM 71 62665 - 62650 - g 70 -9 -3.41627 | opp_overlap 62650, overlap 62649 TGATGAAGACAAAAC CGACCT CACC AGGTCG TCGTTCAATGGTGAA rplB 62628 - 63458 + | 50S ribosomal protein L2 Pnuc_0057 63478 - 63756 + | ribosomal protein S19 rplV 63767 - 64096 + | 50S ribosomal protein L22 TERM 72 64816 - 64793 - g 83 -4.6 -5.27476 | gap 1, overlap 64795 64814 CTGAAGAAAAGAAAA CTCGTCGTGCT CCA AGCAAGAC-AG CTGCTCGTAAACCAG Pnuc_0059 64105 - 64932 + | ribosomal protein S3 rplP 64935 - 65348 + | 50S ribosomal protein L16 Pnuc_0061 65345 - 65557 + | ribosomal protein L29 Pnuc_0062 65570 - 65839 + | ribosomal protein S17 Pnuc_0063 66023 - 66391 + | ribosomal protein L14 rplX 66401 - 66709 + | 50S ribosomal protein L24 TERM 73 66773 - 66762 - g 82 -5.8 -5.15167 | opp_overlap 66762, overlap 66764 CACTATCAAGAAAAA GTCG TTGC CGAC TTGATTACCAAATTT Pnuc_0065 66726 - 67268 + | ribosomal protein L5 rpsN 67278 - 67583 + | 30S ribosomal protein S14 Pnuc_0067 67608 - 68003 + | ribosomal protein S8 Pnuc_0068 68014 - 68547 + | ribosomal protein L6 Pnuc_0069 68561 - 68914 + | ribosomal protein L18 TERM 74 69220 - 69230 + G 84 -8.2 -4.61873 | TACTGGTCAGCATGG CGCG TCA CGCG TTTTGATTTCTCCAG rpsE 68933 - 69451 + | 30S ribosomal protein S5 Pnuc_0071 69476 - 69664 + | ribosomal protein L30 TERM 75 69756 - 69736 - g 78 -4.7 -5.06414 | gap 1, opp_overlap 69740 69741 GGGCTCCAAGAAAAA CCGTCGTC GCGTAG GACG-CGG CATTGGTTCTGGTCT TERM 76 70104 - 70088 - g 73 -8 -4.11394 | opp_overlap 70101 ACTGCAGGCGCAAAA GCAGCT ATTGA AGCTGC CGGCGGCAAATTGGT Pnuc_0072 69692 - 70132 + | ribosomal protein L15 Pnuc_0073 70151 - 71488 + | preprotein translocase, SecY subunit TERM 77 71611 - 71631 + G 73 -7.6 -4.07568 | opp_overlap 71611 71609, overlap 71613 ACATTTCTGGAAAGA TGCGGATG CACTA CATCCGTA TTTTGCCGGGAGACA Pnuc_0074 71493 - 71711 + | translation initiation factor IF-1 rpsM 71888 - 72253 + | 30S ribosomal protein S13 Pnuc_0076 72272 - 72679 + | 30S ribosomal protein S11 TERM 78 72835 - 72851 + G 75 -6.5 -4.40561 | AGGCCAAATTAGCAC GTCGGGA AGG TACCGAC TTATTTTTAAAGAGC Pnuc_0077 72798 - 73421 + | ribosomal protein S4 TERM 79 74122 - 74147 + G 71 -7.5 -3.88787 | overlap 74123 TGATCAATTAGTAGT ATTCGCAGCTC TTGA GAGCAGCGAAG TTTCTGGCGATCTCG TERM 80 74123 - 74146 + G 74 -11 -2.92951 | overlap 74122 GATCAATTAGTAGTA TTCGCAGCTC TTGA GAGCAGCGAA GTTTCTGGCGATCTC TERM 81 74409 - 74397 - g 76 -9.1 -3.73107 | GCATGAAACTCGAAA GCTGG CCT CCAGC TAACCTCGAGAAATA Pnuc_0078 73445 - 74425 + | DNA-directed RNA polymerase subunit alpha rplQ 74442 - 74831 + | 50S ribosomal protein L17 TERM 82 74859 - 74876 + F 89 -5.5 -5.42514 | overlap 74852 CAGTTACGGTAAAAA GCTAGGC TTCG GTCTGGC TTTTTTCATTTATCA Pnuc_0080 74907 - 75257 + | CutA1 divalent ion tolerance protein TERM 83 76798 - 76784 - g 73 -10 -3.44325 | opp_overlap 76779 76795 AGCCCGGAGAATCAA GCGCTT CTC AAGCGC TATGGGCTTTATGGA Pnuc_0081 75254 - 76930 + | protein-disulfide reductase TERM 84 76936 - 76953 + G 75 -2.7 -5.15167 | gap 1 ACGCAATTAAATCGA TGGTCAGA ATC TC-GGCCA TTTTTATTGCTACTA Pnuc_0082 76935 - 77429 + | MOSC domain-containing protein Pnuc_0083 78443 - 77418 - | delta-aminolevulinic acid dehydratase Pnuc_0084 79086 - 78421 - | GTP-binding protein, HSR1-related Pnuc_0085 79202 - 79942 + | cytochrome c553-like protein TERM 85 79964 - 79994 + T 100 -14.2 -4.03978 | opp_overlap 79964 79970, overlap 79970 ATTCTAGTTTTCAAA TAAAAACCCCGC CTATGTA GCGGGGTTTTTA TTTGTCTAAAACCTT TERM 86 79994 - 79964 - T 100 -14.9 -3.55563 | opp_overlap 79964 79970, overlap 79970 ATTCTAGTTTTCAAA TAAAAACCCCGCC TATGT AGCGGGGTTTTTA TTTGTCTAAAACCTT TERM 87 79970 - 79988 + T 95 -8.8 -5.42975 | opp_overlap 79970 79964, overlap 79964 GTTTTCAAATAAAAA CCCCGC CTATGTA GCGGGG TTTTTATTTGTCTAA TERM 88 79988 - 79970 - T 100 -9.5 -5.27335 | opp_overlap 79964 79970, overlap 79964 GTTTTCAAATAAAAA CCCCGCC TATGT AGCGGGG TTTTTATTTGTCTAA Pnuc_0086 81332 - 80034 - | diaminopimelate decarboxylase Pnuc_0087 81571 - 81951 + | frataxin family protein Pnuc_0088 83053 - 81968 - | 3-dehydroquinate synthase Pnuc_0089 83544 - 83059 - | shikimate kinase TERM 89 83235 - 83217 - G 78 -12.4 -2.72661 | opp_overlap 83216 CACCATTGCGAAGGA GGGGGCGA CCT TCACCCCC CTTAGTGCGATGCCA Pnuc_0090 84657 - 83596 - | type II and III secretion system protein TERM 90 83763 - 83773 + g 77 -6.8 -4.40358 | opp_overlap 83749 83748 83761, overlap 83742 83771 TGCCGCCAATAATGG CGGT TCC ACCG TTTTCTACGGTGACT TERM 91 84530 - 84518 - G 85 -6.3 -5.26875 | opp_overlap 84518 84517 TCGCTAAGTAAAAAA TTGGT ATG ACCAA GTTTTGCCAAAACCT Pnuc_0091 85406 - 84714 - | hypothetical protein Pnuc_0092 85548 - 87884 + | 1A family penicillin-binding protein Pnuc_0093 87897 - 88601 + | hypothetical protein TERM 92 92089 - 92070 - g 72 -5.8 -4.54727 | gap 1, opp_overlap 92075 GTCGCCAAAGCAAAA GCAGATCAC GTT GTGAT-TGC TGGTCACGATGGCGG TERM 93 92143 - 92157 + G 77 -11.4 -3.19192 | CTATCAAGCATGCTG GCTCCC CAT GGGAGC TTGGCTTAGCTGAAA Pnuc_0094 88797 - 93542 + | glutamate synthase (ferredoxin) TERM 94 93720 - 93736 + G 70 -5.1 -4.4648 | AGGGTGCGCGTTGCA TGGACTG CGG CATTCCA TTTTGTAATAACGGT TERM 95 94596 - 94582 - g 73 -4.2 -4.90079 | ACCCGAAGAAGAAAA CAAGCC TCT GGTTTG GCCTTATTGGCCAAC Pnuc_0095 93581 - 95044 + | glutamate synthase, NADH/NADPH, small subunit Pnuc_0096 95055 - 95903 + | ABC transporter related Pnuc_0097 95903 - 96700 + | hypothetical protein Pnuc_0098 96722 - 97204 + | hypothetical protein Pnuc_0099 97204 - 97962 + | VacJ family lipoprotein Pnuc_0100 98024 - 98656 + | toluene tolerance family protein Pnuc_0101 98670 - 98927 + | sulfate transporter/antisigma-factor antagonist STAS TERM 96 99000 - 99024 + G 75 -2.9 -5.11033 | gap 1, overlap 98999 GGCTTTAGATGATGT CTCT-TTGGC AATTGA GCCAGGAGAG TTTTTTGGGCTTCTA Pnuc_0102 98932 - 99684 + | ABC transporter related Pnuc_0103 99681 - 100469 + | ABC-2 type transporter Pnuc_0104 100490 - 100738 + | BolA family protein Pnuc_0105 100781 - 102055 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase hisG 102076 - 102702 + | ATP phosphoribosyltransferase catalytic subunit Pnuc_0107 102737 - 104059 + | histidinol dehydrogenase TERM 97 104101 - 104119 + T 76 -6.7 -4.31293 | AGGATTTCTTGTAAG GCAGCGA CAAGC TCGTTGC TTTGTTCATCTGTGC Pnuc_0108 105146 - 104079 - | histidinol-phosphate aminotransferase TERM 98 104930 - 104945 + g 76 -4 -5.02074 | opp_overlap 104910 TGGGATCTAAGCCAT GCAATT GAGC GATTGC TTTTTTAAGGGCTAA Pnuc_0109 105260 - 105847 + | imidazoleglycerol-phosphate dehydratase Pnuc_0110 105895 - 106557 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Pnuc_0111 106577 - 107338 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 99 107926 - 107967 + G 74 -10.2 -3.1876 | gap 1, overlap 107890 AGTGACGCTGTGTCG GTGCCGGTGATTGCCT-CC GGTGG GGTAGGCAATCTTCAGCAC TTAGTGGATGGCATT TERM 100 108005 - 108019 + G 72 -5 -4.66609 | GCCACGCTGATGCGG TATTGG CAG CCAGTA TTTTTCACTACGGTG Pnuc_0112 107338 - 108096 + | imidazoleglycerol phosphate synthase, cyclase subunit Pnuc_0113 108139 - 108552 + | phosphoribosyl-AMP cyclohydrolase TERM 101 108571 - 108554 - f 83 -7.1 -4.70117 | AATCGAAGAAATAAA GTCTTTT CTAT AAAAGAC ATAAAATGATTCTAT Pnuc_0114 108585 - 108986 + | phosphoribosyl-ATP pyrophosphohydrolase Pnuc_0115 109013 - 109369 + | histidine triad (HIT) protein Pnuc_0116 109386 - 109607 + | twin arginine-targeting protein translocase tatB 109645 - 110121 + | sec-independent translocase TERM 102 110345 - 110357 + G 71 -3.3 -4.89054 | overlap 110340 GTAAGATGATTGTGA CCGAT GTC ACCGG TTCTTTTTTTGTGCC Pnuc_0118 110140 - 110916 + | Sec-independent protein translocase, TatC subunit TERM 103 111053 - 111022 - f 79 -10.2 -3.60792 | gap 1 CCTTCAATCTCTAAA TCGGCCGCC-GCAAA AAC TTTGCCGGCCGCCAA TAAGGCGCGGCGCTG Pnuc_0120 112570 - 113844 + | porin TERM 104 113923 - 113894 - f 88 -10.7 -4.08689 | opp_overlap 113898, overlap 113898 GAGTTAAGAAGTAAA TTAACCCACCGTG TAAA CACGGTGGGTTTT TTCTTTTGCGGCGAC TERM 105 113898 - 113919 + F 100 -15.9 -5.79595 | opp_overlap 113894 113898 TAAGAAGTAAATTAA CCCACCGTG TAAA CACGGTGGG TTTTTTCTTTTGCGG TERM 106 113919 - 113898 - f 100 -15.9 -3.65261 | opp_overlap 113898, overlap 113894 TAAGAAGTAAATTAA CCCACCGTG TAAA CACGGTGGG TTTTTTCTTTTGCGG TERM 107 115052 - 115039 - g 71 -3.9 -4.73864 | overlap 115032 TTAAGCAAGAGAAAA TTTCT CCAA AGAAA AAAATACGGCTTGGT TERM 108 115559 - 115571 + G 72 -5.5 -4.49352 | TAAAGAGCTTGGGCT TCCTG AGT CGGGA TTTGTGTTTTGCTGT Pnuc_0121 113982 - 116180 + | TPR repeat-containing protein Pnuc_0122 118152 - 116170 - | TPR repeat-containing protein TERM 109 116599 - 116611 + g 76 -4.7 -4.88407 | overlap 116600 AAAAACAAACCTTTG AGGGG CAA CCCCA TTTTTGCTTGCATAC TERM 110 117532 - 117521 - G 83 -4.4 -5.36441 | opp_overlap 117521 TCGCCATATAAAAAA TCCA CATT TGGA TTTTGTGCATATGCT Pnuc_0123 119321 - 118149 - | peptidase S1 and S6, chymotrypsin/Hap TERM 111 119076 - 119088 + g 75 -2.7 -5.1356 | opp_overlap 119087 TCTTTTTTTAGTTTT TGGTT TAG AACTA TTTTTATTGGTAAAA TERM 112 119306 - 119279 - G 76 -7.8 -4.23486 | AAGCAGCTAAAAGAA TGGTTACCGATT GTGC AAACAGTAACCA AAGTCGATTAAACAT Pnuc_0124 119766 - 119344 - | large conductance mechanosensitive channel protein TERM 113 119519 - 119533 + g 72 -2.7 -5.02074 | opp_overlap 119520, overlap 119520 TTGCCATAGGCAAAA AGCGG TACCC CCGCC TTTTTTAAGGCATCA TERM 114 119532 - 119520 - G 78 -6.2 -4.70659 | opp_overlap 119519 119520 TGCCATAGGCAAAAA GCGG TACCC CCGC CTTTTTTAAGGCATC Pnuc_0125 119904 - 120506 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit Pnuc_0126 120517 - 121917 + | cytochrome b/b6 domain-containing protein TERM 115 122067 - 122044 - g 72 -8.8 -3.57106 | gap 1, overlap 122040 GCCAATGCAAATGAA GGCGGCTTTCC ATT GGAT-GCCGCC CCTAATCGCGTAAGC Pnuc_0127 121951 - 122724 + | cytochrome c1 TERM 116 122738 - 122758 + F 82 -11.2 -3.14211 | opp_overlap 122741 AATTTGATGTTGAGA TGAGGCTC TTAAC GAGCCTCA TTAGTGGAAAAGAAT Pnuc_0128 122834 - 123445 + | glutathione S-transferase domain-containing protein TERM 117 123508 - 123535 + G 100 -12 -4.67038 | opp_overlap 123508 ATAAACCATATCTAA TCCGTGCCCTAC ACCA GTGGTGCACGGA TTTTGGTTTTACGCC TERM 118 123535 - 123508 - g 71 -9.8 -3.18126 | opp_overlap 123508 ATAAACCATATCTAA TCCGTGCCCTAC ACCA GTGGTGCACGGA TTTTGGTTTTACGCC Pnuc_0129 123474 - 123881 + | stringent starvation protein B TERM 119 123986 - 124012 + F 100 -12.4 -5.31059 | opp_overlap 123981 123986 ACCAAAATACTAAAA GGATTTACGGTC TTA GGCTGTAAATCC TTTTTTCATTGCTAT TERM 120 124012 - 123986 - f 82 -8 -4.56729 | opp_overlap 123986, overlap 123981 ACCAAAATACTAAAA GGATTTACGGTC TTA GGCTGTAAATCC TTTTTTCATTGCTAT TERM 121 124101 - 124088 - f 71 -3.9 -4.85599 | GTGATGTCATAAAAA TACAA TTTG TTGTA GCCACTCGTTTAAGT TERM 122 124152 - 124138 - f 75 -5.6 -4.74801 | opp_overlap 124136 124138 124139, overlap 124139 GAATTTTATGAAAAA TCTGCC ACT GGCAGG TCTTTAGCCCTCTAC TERM 123 124151 - 124139 - f 72 -9.1 -3.44158 | opp_overlap 124138 124136 124139, overlap 124138 AATTTTATGAAAAAT CTGCC ACT GGCAG GTCTTTAGCCCTCTA Pnuc_0130 124186 - 124761 + | TPR domain-containing protein Pnuc_0131 126121 - 124781 - | general substrate transporter TERM 124 125213 - 125182 - G 86 -11.6 -3.55145 | opp_overlap 125183 AACCACTAACTACAA CTGGCTTTCTGCCA ATTT TGTCTGAAAGCCAG CCAGCAAATACCGTA TERM 125 126141 - 126163 + H 75 -10 -2.9313 | opp_overlap 126141 126143, overlap 126140 126143 TTTCGCTAAATATTA TATTTGTTGC AAA GCAGCAAATA ATTCTTGATTTGGCC Pnuc_0132 126296 - 126880 + | phasin family protein TERM 126 126919 - 126943 + T 88 -7.7 -5.1244 | opp_overlap 126919 TCAAGTATTAAAAAA CCCCACAGGGC TTA GCTCTCCGGGG TTTTTCTATTAGTCC TERM 127 126943 - 126919 - T 91 -7.7 -5.2189 | opp_overlap 126919 TCAAGTATTAAAAAA CCCCACAGGGC TTA GCTCTCCGGGG TTTTTCTATTAGTCC Pnuc_0133 128248 - 126974 - | hypothetical protein TERM 128 128215 - 128188 - G 72 -5.6 -4.39166 | gap 1 GCGCATATACCAAAA GGCCTGCACAC AATCCGA ATG-GCAGGCC AAATAGTAAAAGCGA Pnuc_0134 128570 - 128262 - | glutaredoxin-like protein Pnuc_0135 129519 - 128668 - | HemK family modification methylase TERM 129 128958 - 128974 + g 100 -9.5 -4.77036 | opp_overlap 128958 GTGGATTGCTAAGGA TGATGTC AAA GACATCA TTTTTACTGATAGCC Pnuc_0136 130606 - 129527 - | peptide chain release factor 1 Pnuc_0137 131923 - 130607 - | shikimate/quinate 5-dehydrogenase Pnuc_0138 132983 - 132189 - | uracil-DNA glycosylase superfamily protein Pnuc_0139 134767 - 132983 - | peptidase M61 domain-containing protein TERM 130 133835 - 133808 - G 76 -4.1 -5.03747 | AAAGCCTTCAAAAAA CCAAAGCAGCC TAGTGT GGTTTCTTTGG CTGAGATGGTAAGGT TERM 131 134541 - 134556 + g 83 -4.6 -5.42514 | overlap 134542 134553 CATCGATCATTATCG ATGCGC TCAA GCGCAA TTTTTTGCTTTGTAC TERM 132 134542 - 134555 + g 74 -8.1 -3.83882 | overlap 134541 134553 ATCGATCATTATCGA TGCGC TCAA GCGCA ATTTTTTGCTTTGTA Pnuc_0140 135492 - 134779 - | putative thiol:disulfide interchange protein TERM 133 134990 - 135012 + g 74 -5.6 -4.57073 | GTCTTCGACGGGTCA GCAGAGCA CCAGATT TGCTTTGC TTTTTGAGCGGAGTC Pnuc_0141 136759 - 135485 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 134 137507 - 137492 - g 76 -4.6 -5.07652 | CGCGGCAAAAGAAAA TGCGCC GGTA GTCGCA GTATGCGCAGCCATC Pnuc_0142 136800 - 137894 + | GTP-binding protein YchF TERM 135 137917 - 137944 + T 93 -10 -4.82901 | opp_overlap 137923, overlap 137923 ATTCAAACCGATATT AAAAAAGCCCTT AACA AAGGGCTTTTTC TTTTTATGGCAGCGA TERM 136 137923 - 137938 + T 100 -9 -5.69262 | opp_overlap 137923, overlap 137917 ACCGATATTAAAAAA GCCCTT AACA AAGGGC TTTTTCTTTTTATGG TERM 137 137938 - 137923 - T 93 -9 -5.22312 | opp_overlap 137917 137923 ACCGATATTAAAAAA GCCCTT AACA AAGGGC TTTTTCTTTTTATGG Pnuc_0143 138317 - 137967 - | hypothetical protein Pnuc_0144 138429 - 138998 + | hypothetical protein Pnuc_0145 139782 - 138979 - | indole-3-glycerol-phosphate synthase TERM 138 139703 - 139715 + g 80 -6.3 -4.77759 | GCTTGCTCGCGATGA TTTCC AAG GGAAA TTTTTGATGAGTTAT Pnuc_0146 140817 - 139792 - | anthranilate phosphoribosyltransferase Pnuc_0147 141392 - 140826 - | glutamine amidotransferase of anthranilate synthase Pnuc_0148 142881 - 141376 - | anthranilate synthase component I TERM 139 141989 - 142004 + g 71 -7.6 -3.86015 | TCTGCAGCCCGTTTT TCTTGG CGAA CCAAGA TTTCTGGAGAAGATC Pnuc_0149 143606 - 142881 - | ribulose-phosphate 3-epimerase apaG 143656 - 144030 + | ApaG TERM 140 145250 - 145279 + G 74 -5.6 -4.69656 | opp_overlap 145245 CCGGTGAAATGGCGG GCCGCATGAAGC AAAACG GCAACATGTGGC TTTTATTGCCTCGTT Pnuc_0151 144169 - 145296 + | MltA domain-containing protein Pnuc_0152 146489 - 145299 - | amidohydrolase TERM 141 146383 - 146394 + g 74 -5.8 -4.63218 | opp_overlap 146383 GCCTGAGCAACTAGA TCGG CAGT CCGA TTTTCTTCGAAACGC Pnuc_0153 147264 - 146548 - | dethiobiotin synthase Pnuc_0154 148496 - 147261 - | 8-amino-7-oxononanoate synthase Pnuc_0155 149908 - 148493 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase Pnuc_0156 149930 - 150967 + | biotin synthase TERM 142 151048 - 151078 + G 71 -7.6 -3.96892 | gap 1 GTTGGCGGCGCACAT TCTCGCC-GGCCT ACCCCA GGGTCAGGCGAGA TTTCTCATGCAAATT Pnuc_0157 150979 - 151608 + | putative ubiquinone biosynthesis protein TERM 143 151685 - 151666 - f 75 -8 -4.09864 | opp_overlap 151654 151666 151664 ATTTATTTTTTAAAA TACTGTTT TTAA AAACAGTA TATTTGGCGATTATC Pnuc_0158 151901 - 152332 + | cell division protein MraZ Pnuc_0159 152345 - 153295 + | S-adenosyl-methyltransferase MraW Pnuc_0160 153292 - 153558 + | cell division protein FtsL Pnuc_0161 153555 - 155327 + | peptidoglycan glycosyltransferase TERM 144 155408 - 155437 + G 85 -7.3 -5.08824 | gap 1, overlap 155413 GCAAAGGTCGGTGCG GATAGTCGTCAGAT TCA GTCTGGCGA-TATC TTTTTTGCATACCCA TERM 145 155413 - 155433 + G 72 -8.3 -3.67773 | overlap 155408 GGTCGGTGCGGATAG TCGTCAGAT TCA GTCTGGCGA TATCTTTTTTGCATA Pnuc_0162 155324 - 156874 + | UDP-N-acetylmuramyl-tripeptide synthetase TERM 146 157080 - 157092 + G 70 -9.1 -3.34895 | CGTTGCGAGTTCTGG GGCTG GCG CAGCC TTAATTAGCAATAAA TERM 147 157838 - 157818 - g 89 -9.1 -4.60487 | opp_overlap 157820, overlap 157828 CATCAGTCTTAAAAA GATTCAAGA AGG CCTTGAATC ATTCCAGCCCGTTAA TERM 148 158132 - 158156 + G 78 -5 -4.95155 | gap 1, opp_overlap 158133, overlap 158133 AGAGTGCGAAAGGAA AGAGT-GCGCT ATCT AGCGCTACTCA TTTTTCTAATATGGA TERM 149 158155 - 158133 - g 76 -8.5 -4.06502 | gap 1, opp_overlap 158133 158132 GAGTGCGAAAGGAAA GAGT-GCGCT ATCT AGCGCTACTC ATTTTTCTAATATGG Pnuc_0163 156874 - 158319 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 150 159337 - 159316 - g 73 -10.3 -3.01712 | opp_overlap 159332 159333 TGGTGTGGTTCAAGA TCACCAAAA AACA TTTTGGTGA GGGTCGCCGTATTTT Pnuc_0164 158310 - 159479 + | phospho-N-acetylmuramoyl-pentapeptide-transferase Pnuc_0165 159494 - 161116 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase Pnuc_0166 161113 - 162384 + | cell division protein FtsW Pnuc_0167 162381 - 163454 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 151 163641 - 163655 + G 71 -7.8 -3.94634 | overlap 163649 CTAAAAATGTTGGGA CCGCTG AGG CAGTGG TTATTTCAACTGCTG TERM 152 164848 - 164880 + G 74 -11.3 -2.87132 | CGCAGGTTCAATCTC TGCTTTGCCTCACAC TTT GTCGGAGGCGAAGCA TGTCTAAGCAAGAGG murC 163451 - 164887 + | UDP-N-acetylmuramate--L-alanine ligase TERM 153 165445 - 165419 - g 80 -12.3 -3.06969 | opp_overlap 165414 GAAGTCAGTGGAAGA GCTGCCAGCTG CTTAT CAGCTTGCAGC CGGTCTTGATAAAAA Pnuc_0169 164880 - 165893 + | D-alanine--D-alanine ligase Pnuc_0170 165890 - 166747 + | polypeptide-transport-associated domain-containing protein Pnuc_0171 166757 - 167986 + | cell division protein FtsA Pnuc_0172 168035 - 169375 + | cell division protein FtsZ Pnuc_0173 169488 - 169988 + | redoxin domain-containing protein TERM 154 170333 - 170345 + G 73 -4.1 -4.78157 | TGCCCATCATGGATG GAAGT GCG GCTTC TTTCTTATTTTTAAT lpxC 170020 - 170934 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Pnuc_0175 171453 - 170956 - | hypothetical protein TERM 155 171389 - 171432 + g 75 -11 -2.94144 | opp_overlap 171405, overlap 171402 CCAAGCCCATCAGAT TCACGCAGGTAATCAACCCA CTCA TGGGCTGTTTGCTTGCGGGA TGGTTTGGCTGCAAA TERM 156 171537 - 171555 + G 73 -10.2 -3.02829 | CTTAAAACCCTGGTC GGCAGTCG AAA CGACCGCC TCTTAAAACAGTATC TERM 157 172536 - 172505 - g 79 -8.8 -4.08394 | opp_overlap 172506 ATATGTCGTTCAAAA CGGTGAAGTCATCA TTGT TGATGAATTCACAG GCCGTTTGATGCAAG Pnuc_0176 171507 - 174272 + | preprotein translocase, SecA subunit TERM 158 174302 - 174321 + F 93 -10 -4.8622 | opp_overlap 174302 174301 ACTAGTGATTAAAAG GGCTCAGA TTTA TCTGGGCC TTTTTACTTGGGAGA TERM 159 174829 - 174816 - g 73 -4.5 -4.82667 | opp_overlap 174816, overlap 174818 CGATGAGATTAAAAA TGCCA TGAG CGGCA ATATTTGTCGCTGTG Pnuc_0177 174442 - 174900 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 160 174966 - 174982 + G 79 -7.9 -4.54821 | opp_overlap 174964 174965 TTTATTCAGCAAACC GCGACTG CAG CAGGCGC TTTTGTAGTTGGGAT Pnuc_0178 174912 - 177035 + | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 161 177079 - 177059 - f 100 -11.1 -5.1963 | opp_overlap 177059 GTGAAGTAAGAAAAA GCGCGCC TCTCATT GGCGCGC TTTGTTTTTAGGGCT TERM 162 177059 - 177079 + F 93 -11.1 -4.86385 | opp_overlap 177059 GTGAAGTAAGAAAAA GCGCGCC TCTCATT GGCGCGC TTTGTTTTTAGGGCT Pnuc_0179 177114 - 178349 + | arginine biosynthesis bifunctional protein ArgJ Pnuc_0180 178364 - 179221 + | hypothetical protein Pnuc_0181 179231 - 179647 + | NUDIX hydrolase Pnuc_0182 180396 - 179644 - | hypothetical protein TERM 163 179838 - 179819 - G 70 -9.3 -3.29829 | overlap 179835 TAGACTTTTCCAGAA GGCGCTT GTTGGA AAGCGCC GCTATGAGCAACAAC TERM 164 179914 - 179896 - G 79 -7.4 -4.50298 | TAAACGCAAAAATAA TTGGCATG CAT CCTGCCAA GGCAGCAAAGGACTG Pnuc_0183 181028 - 180408 - | dephospho-CoA kinase Pnuc_0184 181549 - 181049 - | peptidase A24A, prepilin type IV Pnuc_0185 182595 - 181549 - | type II secretion system protein Pnuc_0186 183668 - 182586 - | type II secretion system protein E Pnuc_0187 184954 - 183665 - | hypothetical protein Pnuc_0188 185033 - 185584 + | methylated-DNA--protein-cysteine methyltransferase Pnuc_0189 186570 - 185581 - | squalene/phytoene synthase TERM 165 186539 - 186551 + g 80 -5.5 -5.09204 | AGATCGCTCTCTGAG CTTCC GAT GGAGG TTTTTCTTGGGATCT TERM 166 186973 - 186985 + G 74 -3.4 -5.00616 | opp_overlap 186966 ACAACCGACGTATGC TCAC GATTG GTGA TTTTTTCCGCGAAAA TERM 167 187190 - 187208 + G 83 -9.6 -4.18934 | ATTTGGGGGGATGTG GTCGGTAG CGA TTACCGAC TTTATTCAGATGATC Pnuc_0190 186678 - 188093 + | Na+/solute symporter Pnuc_0191 188199 - 189218 + | 2-dehydropantoate 2-reductase TERM 168 189289 - 189268 - T 100 -13.1 -5.40072 | opp_overlap 189268 TTGGCTGGAAAAAAA CCCTTGCTA CTGC TAGCAAGGG TTTTTTGTTTTTAAG TERM 169 189268 - 189289 + T 100 -13.1 -5.93252 | opp_overlap 189268 TTGGCTGGAAAAAAA CCCTTGCTA CTGC TAGCAAGGG TTTTTTGTTTTTAAG Pnuc_0192 190080 - 189313 - | fumarylacetoacetate (FAA) hydrolase Pnuc_0193 191116 - 190112 - | farnesyltranstransferase Pnuc_0194 191192 - 191503 + | ribosomal protein L21 rpmA 191523 - 191783 + | 50S ribosomal protein L27 TERM 170 191863 - 191841 - f 91 -13.4 -3.16742 | opp_overlap 191843, overlap 191843 TTTAACTCTTAGGAA CAGGCCTCGC TAA GCGAGGCCTT TTTTATTCATGAAAT TERM 171 191861 - 191843 - f 100 -16 -3.14527 | opp_overlap 191843, overlap 191841 TAACTCTTAGGAACA GGCCTCGC TAA GCGAGGCC TTTTTTATTCATGAA TERM 172 191843 - 191861 + F 100 -16 -5.5112 | opp_overlap 191841 191843 TAACTCTTAGGAACA GGCCTCGC TAA GCGAGGCC TTTTTTATTCATGAA obgE 191872 - 192960 + | GTPase ObgE Pnuc_0197 192986 - 193768 + | glutamate 5-kinase Pnuc_0198 194327 - 193755 - | putative lipoprotein Pnuc_0199 194928 - 194329 - | NUDIX hydrolase TERM 173 195041 - 195013 - g 71 -7.3 -4.13767 | opp_overlap 195017, overlap 195016 CTCGCCACGCTAAAA GAAGCCCCCTCTG ACG CTGAGGTGGTTTC GCATAAGCTCATGGT Pnuc_0200 194977 - 196719 + | prolyl-tRNA synthetase TERM 174 196724 - 196743 + T 100 -15 -3.06831 | opp_overlap 196721 196720 CAGTCGCATAATTTG GGCACCCC AACC GGGGTGCC TTACCTAGAAATTAC TERM 175 196790 - 196769 - T 79 -6.6 -4.58663 | gap 1, opp_overlap 196770, overlap 196770 196771 ATTACTTCTTAAAAA GTCCGCCAA TCCCT TTGGCGG-C TCCTTTGGCCGCCAT TERM 176 196789 - 196771 - T 72 -10.3 -2.60508 | opp_overlap 196770, overlap 196769 196770 TACTTCTTAAAAAGT CCGCCAA TCCCT TTGGCGG CTCCTTTGGCCGCCA Pnuc_0201 198137 - 196755 - | signal recognition particle protein TERM 177 196805 - 196825 + g 72 -4.7 -4.64657 | gap 1 CTCCTTTGGCCGCCA TGGC-CGC CATCGT GCGAGCCA TTTTTCCGCCTTTAA TERM 178 197083 - 197101 + g 79 -4.4 -5.22039 | overlap 197084 GGCAGCTTATCCATC AGGCTGGC CAT GCCACCCA TTTTTTGCATTTGCA TERM 179 198709 - 198722 + G 70 -2.4 -5.04868 | opp_overlap 198709 CTTGCCACCATTAAT GACT ATGGAA AGTC TTTTGTTTAATTTGC TERM 180 198745 - 198755 + G 76 -8.2 -4.19238 | TAATTTGCTTTATGT GGGC TTT GCCC TTTTGAGCTTGACAG Pnuc_0202 198158 - 199006 + | cytochrome c assembly protein Pnuc_0203 199139 - 199816 + | N-acetyl-anhydromuranmyl-L-alanine amidase Pnuc_0204 200089 - 203070 + | ribonucleotide-diphosphate reductase subunit alpha TERM 181 203089 - 203062 - f 77 -10.8 -2.77167 | gap 1, opp_overlap 203068 GAAGAATGTGAAGCA TG-CCAATAAGCA ATT TGCTTATTGGTCA GAATTAGAAGAAATT Pnuc_0205 203116 - 204300 + | ribonucleotide-diphosphate reductase subunit beta TERM 182 204406 - 204393 - f 73 -6.7 -4.24404 | ACTCAAATCCGAAAA CCCTT GTTT AAGGG TGCCTGGGCTATTCT TERM 183 204449 - 204472 + F 100 -12.4 -5.41746 | opp_overlap 204449 CAGCACATTTAAGAA GCCGTTGTCC TTTG GGACCACGGC TTTTTTTCCAAGATT TERM 184 204472 - 204449 - f 90 -12.4 -3.71487 | opp_overlap 204449 CAGCACATTTAAGAA GCCGTTGTCC TTTG GGACCACGGC TTTTTTTCCAAGATT Pnuc_0206 204635 - 204949 + | hypothetical protein TERM 185 205102 - 205083 - T 95 -13.6 -3.40403 | opp_overlap 205083 CGGGTGTTACTAGAA GGGGTCTC TCAC GAGACCCC TTTTTTTATTGCCGT TERM 186 205083 - 205102 + T 100 -13.6 -5.80364 | opp_overlap 205083 CGGGTGTTACTAGAA GGGGTCTC TCAC GAGACCCC TTTTTTTATTGCCGT Pnuc_0207 206089 - 205130 - | ribokinase-like domain-containing protein TERM 187 205617 - 205580 - G 74 -3.4 -4.91852 | opp_overlap 205587 TGGATCAAAAATAAA GGGAATATTGGCATCA GCTAAT TGATGACAGTGCTCCC ACATTCCTTGGCGAC Pnuc_0208 207654 - 206134 - | ribosomal protein L11 methyltransferase Pnuc_0209 209035 - 207671 - | acetyl-CoA carboxylase, biotin carboxylase Pnuc_0210 209547 - 209083 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein Pnuc_0211 210033 - 209584 - | 3-dehydroquinate dehydratase, type II Pnuc_0212 210809 - 210282 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 188 211824 - 211806 - g 71 -7.4 -3.87994 | opp_overlap 211805 211816, overlap 211809 AGCGACGTTTAGAAA CTATTGGC GTT GCCAATGG CGTTACTGTGTATGA Pnuc_0213 210836 - 212233 + | UDP-N-acetylmuramate TERM 189 212856 - 212843 - g 70 -5.3 -4.4009 | GGCTATGCCAGAAAA TATCC TTCA GGATA TCGAGCGCCGCAGCT Pnuc_0214 212253 - 212990 + | short-chain dehydrogenase/reductase SDR TERM 190 213159 - 213145 - g 71 -7.1 -4.07568 | opp_overlap 213144 GCTGCGCTTTGAAAA GCCTG AAGCA CAGGC GGTTATGGATGAAGC TERM 191 213316 - 213331 + G 74 -5.4 -4.58395 | gap 1, overlap 213317 213322 TTTAGCCATTGCCTT G-CAGGG AGC CCCTGTC TTTTTCCGGCGTAAG TERM 192 213317 - 213329 + G 77 -9.1 -3.90762 | overlap 213316 213322 TTAGCCATTGCCTTG CAGGG AGC CCCTG TCTTTTTCCGGCGTA TERM 193 214236 - 214288 + G 81 -5 -5.10163 | gap 1, opp_overlap 214253 AACGTGTGGCTAATG GTCTGCGTGCTGAGCAATTGGGA GTGATTGA TCCCAATGCCTTAGCAAG-AGAC TTTTATTTTCAGATT Pnuc_0215 212993 - 215023 + | ribonuclease II Pnuc_0216 215007 - 215894 + | TonB family protein Pnuc_0217 215943 - 216848 + | shikimate 5-dehydrogenase Pnuc_0218 216857 - 217594 + | monofunctional biosynthetic peptidoglycan transglycosylase pyrF 218443 - 217598 - | orotidine 5'-phosphate decarboxylase Pnuc_0220 218517 - 219482 + | magnesium and cobalt transport protein CorA Pnuc_0221 219978 - 219484 - | CinA domain-containing protein Pnuc_0222 220547 - 219975 - | phosphatidylglycerophosphatase A TERM 194 220210 - 220197 - G 70 -5.3 -4.52143 | opp_overlap 220205 220208, overlap 220205 GCGAAAGAGAATAAA TGCAA TGAT TTGCA TCCAAATGCTTGTCG Pnuc_0223 221563 - 220544 - | thiamine-monophosphate kinase TERM 195 222943 - 222957 + G 72 -8.6 -3.72695 | GTTACAGCAATTTGT GTACCA CTC TGGTAC TTTGATGAAGCCCCT Pnuc_0224 221648 - 223969 + | malic enzyme TERM 196 224648 - 224666 + G 72 -5.2 -4.56597 | opp_overlap 224646, overlap 224634 AGACTCTATTAGACG TCTTCCGT GAC GCGGTAGA TTTTTGGGCAGAGCG TERM 197 224685 - 224700 + G 70 -4.7 -4.50358 | TTGGGCAGAGCGTCG CACAC CATATC GTGTG TTTTACTCTTTCGCT Pnuc_0225 224098 - 224718 + | hypothetical protein TERM 198 224742 - 224760 + T 90 -10.3 -4.39571 | ACATCATTGCTGCAA TCGCCTC TATTT GAGGCGA TTTTGCATTTCTGGG Pnuc_0226 225509 - 224748 - | hypothetical protein TERM 199 225416 - 225395 - G 73 -4.3 -4.7373 | overlap 225397 CTAGTCCATCAAAAA CAGGAAAGG TTTC CCCCACCTG AATGCGTCTGACGCG Pnuc_0227 225575 - 227548 + | transketolase Pnuc_0228 227574 - 228602 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 200 228641 - 228674 + T 91 -10.6 -4.42386 | gap 1, opp_overlap 228641 228642 228649, overlap 228642 228649 AAATTACCTAAGTAA T-CAAAAAAGACCTC TATTT GAGGTCTTTTTTGTA TTTTCTCCCTGAAAA TERM 201 228673 - 228641 - T 86 -12.2 -3.39432 | opp_overlap 228641 228642 228649, overlap 228642 228649 AAATTACCTAAGTAA TCAAAAAAGACCTC TATTT GAGGTCTTTTTTGT ATTTTCTCCCTGAAA TERM 202 228642 - 228672 + T 100 -15.7 -3.82117 | opp_overlap 228642 228641 228649, overlap 228641 228649 AATTACCTAAGTAAT CAAAAAAGACCTC TATTT GAGGTCTTTTTTG TATTTTCTCCCTGAA TERM 203 228672 - 228642 - T 95 -15.7 -2.62936 | opp_overlap 228641 228642 228649, overlap 228641 228649 AATTACCTAAGTAAT CAAAAAAGACCTC TATTT GAGGTCTTTTTTG TATTTTCTCCCTGAA TERM 204 228649 - 228665 + T 100 -8 -5.65678 | opp_overlap 228649 228642 228641, overlap 228642 228641 TAAGTAATCAAAAAA GACCTC TATTT GAGGTC TTTTTTGTATTTTCT TERM 205 228665 - 228649 - T 91 -8 -5.32565 | opp_overlap 228642 228641 228649, overlap 228642 228641 TAAGTAATCAAAAAA GACCTC TATTT GAGGTC TTTTTTGTATTTTCT Pnuc_0229 229151 - 228696 - | ferric uptake regulator family protein TERM 206 229252 - 229272 + G 73 -10.5 -2.98356 | overlap 229244 229261 TTTTTAAGGGGCGTT TCTAGCTCT GCC AGAGCTGGA TATATCACTTTGGCT TERM 207 229438 - 229419 - g 74 -10.8 -3.1552 | overlap 229417 TTCTAGCGAGCAATA TGCCAAGT TACA ACTTGGCA TGAGTCGTGAGCAAG Pnuc_0230 229195 - 229944 + | SmpA/OmlA domain-containing protein TERM 208 230738 - 230748 + G 70 -2.4 -5.02074 | GCGCAAGGCTCCTTA CGCG CTG CACG TTTTTTACAGAATCA Pnuc_0231 230009 - 230812 + | dihydrodipicolinate reductase TERM 209 231004 - 231020 + G 77 -10.9 -3.13728 | CATGTTCAATGCTCC CTTACCC ATC GGGTAAG TTGCATATGGGTCAT Pnuc_0232 230862 - 233534 + | leucyl-tRNA synthetase Pnuc_0233 233553 - 234080 + | rare lipoprotein B precursor Pnuc_0234 234096 - 235157 + | DNA polymerase III, delta subunit TERM 210 235259 - 235271 + G 70 -9.1 -3.41602 | AAGACATTGGCAAGT GCGCT CGT AGCGC TTCTCGTGCCATGGC Pnuc_0235 235204 - 236493 + | gamma-glutamyl phosphate reductase Pnuc_0236 236537 - 236962 + | hypothetical protein TERM 211 237561 - 237549 - g 78 -6.2 -4.72272 | TGGCGTGATGAAAAA GGGG ACGCA CCCC TTAAAGAAAACTTAG TERM 212 237779 - 237800 + G 72 -8.1 -3.76759 | gap 1 TTCAGTTCATGGATT TGGCTTTCAG AGA CTGAA-GCCA TTTAATGAGGTTGCT Pnuc_0237 237009 - 238466 + | putative RNA methylase Pnuc_0238 238523 - 238693 + | rubredoxin-type Fe(Cys)4 protein Pnuc_0239 238706 - 240010 + | glutamate-1-semialdehyde-2,1-aminomutase TERM 213 240029 - 240067 + T 79 -8.3 -3.99957 | gap 1, opp_overlap 240030, overlap 240030 240038 240066 TTTCAAATAGAACTT ACATTCTGAGTGGATGGT CATA ACCGTCCACTT-GAATGA TTTCTAAATCTTTGC TERM 214 240030 - 240066 + T 82 -11.8 -2.99251 | gap 1, opp_overlap 240030, overlap 240029 240038 TTCAAATAGAACTTA CATTCTGAGTGGATGGT CATA ACCGTCCACTT-GAATG ATTTCTAAATCTTTG TERM 215 240038 - 240059 + T 79 -10.9 -3.17798 | opp_overlap 240030, overlap 240030 240029 GAACTTACATTCTGA GTGGATGGT CATA ACCGTCCAC TTGAATGATTTCTAA apaH 240866 - 240027 - | diadenosine tetraphosphatase TERM 216 240765 - 240796 + g 84 -10.4 -3.90316 | opp_overlap 240764 240763, overlap 240763 GCGATTAACTAAATC TCCCAAAAAAATCA GTTT TGATTTTTTTGGAA TCTTTTTAACGAGGT Pnuc_0241 242378 - 240900 - | deoxyribodipyrimidine photo-lyase TERM 217 241176 - 241158 - G 70 -8.8 -3.38603 | overlap 241156 241159 AAAGATGCGGAAATA GGGCTGTG CAT CACAGCCG GAAGAAGATGCCCAT TERM 218 241175 - 241159 - G 78 -12.3 -2.62439 | overlap 241158 241156 AAGATGCGGAAATAG GGCTGTG CAT CACAGCC GGAAGAAGATGCCCA TERM 219 242292 - 242280 - G 74 -3.4 -4.91852 | opp_overlap 242280 TTCATCAAAAATAAA GGTT ACCCA AACC TGTTTACTCTCCTTG Pnuc_0242 242455 - 243273 + | hypothetical protein TERM 220 243329 - 243339 + G 71 -6.8 -4.14345 | GCCCCCTATGATTCA GACC CCG GGTC TTTGATTTCCTATTC TERM 221 243574 - 243594 + G 71 -9.7 -3.12482 | overlap 243574 AGTGTATTTTGGTGG CCCCGTTCA AAT TGAACGTGG GTTTGTCTTACATGA TERM 222 243574 - 243595 + G 87 -9.5 -4.21607 | gap 1, overlap 243574 AGTGTATTTTGGTGG CCC-CGTTCA AAT TGAACGTGGG TTTGTCTTACATGAA Pnuc_0243 243296 - 243928 + | hypothetical protein Pnuc_0244 243921 - 244337 + | Holliday junction resolvase YqgF Pnuc_0245 244354 - 244857 + | phosphoribosyltransferase Pnuc_0246 244854 - 245834 + | aspartate carbamoyltransferase TERM 223 246027 - 246037 + G 70 -2.4 -5.0538 | CAGGATCAACGTTTT CCGC ATC GCCG TTTTTTGGCGTGGGG Pnuc_0247 245868 - 247199 + | hypothetical protein Pnuc_0248 247205 - 248116 + | hypothetical protein Pnuc_0249 248117 - 248836 + | glycosyl transferase family protein Pnuc_0250 249906 - 248848 - | hypothetical protein TERM 224 249002 - 248977 - G 76 -9.1 -3.76781 | opp_overlap 248977 248976 248975 AAATACCTCATCAAA TTTGCGCATAA TTTC TTTTGCGCAAA AATTTTGTGAGTAGG Pnuc_0251 250854 - 249910 - | hypothetical protein TERM 225 251063 - 251081 + G 74 -6 -4.57837 | CACATCTTGTCTTAT CTTGCG CAGTTCC CGCAAG TTTTTCCAACAATGT Pnuc_0252 250877 - 251644 + | hypothetical protein Pnuc_0253 251688 - 252746 + | dTDP-glucose 4,6-dehydratase Pnuc_0254 252748 - 253707 + | dTDP-4-dehydrorhamnose reductase Pnuc_0255 253734 - 254663 + | glucose-1-phosphate thymidylyltransferase Pnuc_0256 254660 - 255214 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 226 255453 - 255470 + G 70 -4.9 -4.38472 | gap 1 AAATCATTATTCAGT TTGACCTC TTG GAGG-CAA TTCTTTTCCTTTAAA TERM 227 256179 - 256163 - g 75 -9.5 -3.55563 | opp_overlap 256162 256158 AGGGTATTGGTCAAA CCACATT CGT AATGTGG GTGATATTCAGGATC Pnuc_0257 255216 - 256244 + | lipopolysaccharide heptosyltransferase I Pnuc_0258 257886 - 256267 - | TolC family type I secretion outer membrane protein TERM 228 257620 - 257632 + g 76 -4.7 -4.90525 | opp_overlap 257602 AATTAAATCGGTTAA CTGCC CTT GGCTG TTTTGTTTGCCATTA TERM 229 258523 - 258540 + G 74 -11.3 -2.78863 | overlap 258522 258520 ACATCTCGCTCTGGC GCCACCA TTAT TGGTGGC ATGTTGTTTGGTTTG Pnuc_0259 257938 - 258849 + | putative undecaprenol kinase TERM 230 258928 - 258941 + G 70 -2.4 -5.06414 | ATAATATTCAGCTGG CACT AGCACC AGTG TTTTTATTGACGGCA TERM 231 259316 - 259336 + G 72 -8.3 -3.81414 | overlap 259282 TGCCTATAGATCGGC TGGCTGGAA TAT TTCCAGACA TTATTAATTACAGCT Pnuc_0260 258885 - 259343 + | hypothetical protein Pnuc_0261 259368 - 260303 + | NAD-dependent epimerase/dehydratase TERM 232 260346 - 260361 + G 83 -9 -4.30987 | AGGAGTACAGCGTTT TGAGCG GATT CGCTCA TTTGTTCTCAGGGCT TERM 233 260933 - 260914 - g 74 -5.8 -4.62336 | ACTTCAGCTGAAAAA GTAAAAGT CGAA ACCTTTAC CCCTGAAGATATCGC TERM 234 261066 - 261089 + G 73 -9.6 -3.44321 | gap 1, opp_overlap 261066, overlap 261064 261058 GACGAAGTTTGAAAA CCGTGGCATCA AGC TGG-GCCACGG TGTTTGGGATTTGGT TERM 235 261089 - 261066 - g 73 -7.4 -4.15106 | gap 1, opp_overlap 261066 261064 261058 GACGAAGTTTGAAAA CCGTGGCATCA AGC TGG-GCCACGG TGTTTGGGATTTGGT Pnuc_0262 260305 - 261120 + | tRNA (guanine-N(7)-)-methyltransferase Pnuc_0263 262621 - 261149 - | succinic semialdehyde dehydrogenase Pnuc_0264 263300 - 262776 - | NusB antitermination factor Pnuc_0265 263817 - 263305 - | riboflavin synthase Pnuc_0266 264992 - 263847 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase Pnuc_0267 265276 - 265968 + | hypothetical protein Pnuc_0268 265965 - 266294 + | hypothetical protein Pnuc_0269 266344 - 266853 + | hypothetical protein Pnuc_0270 266870 - 267985 + | riboflavin biosynthesis protein RibD TERM 236 268007 - 267988 - f 71 -5 -4.65969 | overlap 267990 AATAAAGAATTAAAA TCCCCGTA TGTT TACAGGAA TCATTACTGCCGTAG Pnuc_0271 267995 - 268612 + | riboflavin synthase subunit alpha Pnuc_0272 269380 - 268640 - | exsB protein Pnuc_0273 270120 - 269389 - | TPR repeat-containing protein TERM 237 270089 - 270076 - G 88 -8.1 -4.90778 | opp_overlap 270076 GGCACTTAAACAAAA CGCTC GTGA GAGCG TTTGTTTGAAAGCTT TERM 238 270076 - 270089 + g 81 -8.1 -4.42464 | opp_overlap 270076 GGCACTTAAACAAAA CGCTC GTGA GAGCG TTTGTTTGAAAGCTT Pnuc_0274 270624 - 270121 - | OmpA/MotB domain-containing protein tolB 272080 - 270770 - | translocation protein TolB TERM 239 271825 - 271835 + g 77 -6.8 -4.37991 | CCTCATCACTTTCAG TGGC GTT GCCA TTTTCAGTATTTTTA Pnuc_0276 272935 - 272084 - | TonB domain-containing protein TERM 240 272514 - 272524 + g 73 -2.4 -5.18561 | GCCTCTACTTTTTTA GGGG CTT CCGC TTTTTTGGGTGTTTC Pnuc_0277 273379 - 272960 - | biopolymer transport protein ExbD/TolR Pnuc_0278 274045 - 273389 - | MotA/TolQ/ExbB proton channel Pnuc_0279 274122 - 275366 + | glycine hydroxymethyltransferase TERM 241 275448 - 275418 - g 82 -13.4 -2.82623 | opp_overlap 275441, overlap 275415 275423 275438 CTTTTGTCATAACGA CGATACCCAGGT TCTAGAT ACCCGGGTATCG GATGAGGGCGATACC Pnuc_0280 275392 - 275838 + | ATP-cone domain-containing protein TERM 242 275873 - 275889 + T 100 -12.3 -5.22794 | opp_overlap 275873 AGCGGAAATAAAAAA GGACTGC ATT GCAGTCC TTTTTTGCTAGTTGT TERM 243 275889 - 275873 - T 100 -12.3 -5.64421 | opp_overlap 275873 AGCGGAAATAAAAAA GGACTGC ATT GCAGTCC TTTTTTGCTAGTTGT adk 276586 - 275921 - | adenylate kinase TERM 244 276159 - 276173 + g 71 -7.8 -3.88438 | overlap 276160 ACATCATCTTTACCT TCCACC TTA GGTGGG TTGTATTTGATGTGG Pnuc_0282 277454 - 276690 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase Pnuc_0283 277649 - 277467 - | hypothetical protein Pnuc_0284 278809 - 277718 - | tetraacyldisaccharide 4'-kinase Pnuc_0285 279279 - 278830 - | biopolymer transport protein ExbD/TolR Pnuc_0286 279942 - 279304 - | MotA/TolQ/ExbB proton channel TERM 245 280578 - 280592 + G 74 -5.7 -4.59773 | CGTGCTGGTATGGGT GGCTT ATACG AAGCC TTTTTAAAACTCAAA Pnuc_0287 280257 - 281483 + | exodeoxyribonuclease VII, large subunit Pnuc_0288 281532 - 282581 + | hypothetical protein Pnuc_0289 283638 - 282601 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 246 284220 - 284185 - g 100 -9.2 -5.08824 | gap 1, opp_overlap 284188 284197 GCCCTATTGAAAAAA GAAGTTACTGAAGCGCC GTT GG-GCTTTAATAACTTC CGTGATTAGGGTGTC Pnuc_0290 283744 - 284229 + | hypothetical protein TERM 247 284268 - 284252 - f 70 -8.7 -3.33815 | AGGTCTTCTAATTAA GGGGATT GAA AACCCCC TTGAAACAAATACCT TERM 248 284329 - 284309 - f 70 -2.5 -5.0917 | overlap 284310 TGAGTAAAAAAGAAA GGGCATTTT ATG AAAAAGCCT AACAAGATAATTCCT Pnuc_0291 284318 - 284590 + | hypothetical protein TERM 249 284742 - 284728 - g 72 -2.8 -5.00616 | TGGTTTGGCAAAAAA TAGTCT TTC AGCCTA TCGCCGTGACTTATT Pnuc_0292 284636 - 285553 + | tyrosine recombinase XerD TERM 250 286212 - 286202 - g 76 -8.2 -4.06491 | TGAATGGCACAGAAA GCCG CAT CGGC TCCAAGAAAGAGACC Pnuc_0293 285601 - 286233 + | hypothetical protein TERM 251 286345 - 286398 + G 78 -5.4 -4.77986 | gap 2, opp_overlap 286333 286355 GCATGCCAAGACAGT GGTTGGC-AAAGCAGGA-TGGCTATA GGGC TAGAGCCAATGCTGCTCAAGCCAACC TTTTTGAATCTTTAC TERM 252 286578 - 286590 + G 88 -3.3 -5.79526 | CTTGCTGGAATGGTG TGCAC AGT GAGCA TTTTTTTTCAGATAT Pnuc_0294 286236 - 286607 + | membrane protein-like protein Pnuc_0295 286648 - 287436 + | GTP cyclohydrolase I Pnuc_0296 287833 - 288141 + | high potential iron-sulfur protein TERM 253 288149 - 288135 - f 73 -5.7 -4.62069 | TGCTTACGCTAAAAA GGCTT AATTA AAGCC CAGTGAAAGCTGCAT TERM 254 288253 - 288236 - f 89 -9.9 -4.14511 | opp_overlap 288223 AACTGCACCCCAAAA GTTGGAC ATCC GTCCAAC CTAATCAGGTGCAGT TERM 255 288691 - 288709 + G 90 -13.2 -3.57144 | opp_overlap 288689 288687 TTACGCATGAAGAGT TACTGCGC AAA GCGCAGTA TTTGGAAGTGGAGAA Pnuc_0297 288273 - 288806 + | ISPsy8, transposase OrfA TERM 256 288898 - 288858 - g 95 -12 -4.17089 | overlap 288881 CCCAAATGCCTAAAA GCGTGTATTACTACTGGC AAAAA GCCAGTAGTAATACTGAC CCCCATGCCAATGCC TERM 257 288898 - 288881 - g 78 -6.3 -4.60487 | overlap 288858 TACTACTGGCAAAAA GCCAGTA GTAA TACTGAC CCCCATGCCAATGCC TERM 258 289624 - 289580 - g 100 -10.8 -5.33405 | overlap 289586 CGGATCAAACAAAAA CTAAAAGGATTGAGTCCGGT GCAAT ACCGAACTCAATCCCTCGTG CTAACCTAGCTAAAC TERM 259 289618 - 289586 - g 100 -17.2 -4.88326 | overlap 289580 AAACAAAAACTAAAA GGATTGAGTCCGGT GCAAT ACCGAACTCAATCC CTCGTGCTAACCTAG Pnuc_0298 288821 - 289633 + | integrase catalytic subunit TERM 260 289769 - 289757 - f 95 -6.3 -5.66989 | overlap 289749 TAAATACTAAAAAAA GTTTC TAT GAAAC GAAGCCTTAAATACC Pnuc_0299 289763 - 290305 + | HPP family protein+B94 Pnuc_0300 290576 - 290331 - | hypothetical protein Pnuc_0301 290637 - 292112 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Pnuc_0302 292163 - 293293 + | GDP-mannose 4,6-dehydratase TERM 261 293552 - 293562 + G 74 -5.4 -4.55697 | ATGCAAACAATACTT TTCC AGC GGAA TTTATTTATCAAAAT Pnuc_0303 293320 - 294297 + | NAD-dependent epimerase/dehydratase Pnuc_0304 294310 - 295056 + | hypothetical protein TERM 262 296116 - 296098 - g 82 -7.4 -4.63218 | opp_overlap 296098 296097 296102 TTGCGTTTAATAAAA CAAAACCC ATT GGGATTTG GTTTGGTGGAAAGAT TERM 263 296207 - 296230 + G 74 -3.8 -5.00467 | GGTGGCTTGATTTCA CTCTAGGC TTAGGCTT GCCTGGGG TTTTCTTATTATTGG Pnuc_0305 295063 - 296463 + | hypothetical protein TERM 264 296710 - 296695 - g 70 -9 -3.4072 | TATTGGGTATCAGAA CCTGAC GAGG GTCAGG CACAGGCCATCAACA Pnuc_0306 296491 - 297297 + | glycosyl transferase family protein Pnuc_0307 297315 - 298223 + | hemolytic protein hlpA-like protein Pnuc_0308 299021 - 298227 - | WecB/TagA/CpsF family glycosyl transferase TERM 265 298743 - 298753 + g 83 -4 -5.38047 | TCTTTGTGCTTGCGT GAAA CCT TTTC TTTTTTGTGTCCATA Pnuc_0309 300069 - 299032 - | glycosyl transferase family protein Pnuc_0310 301448 - 300084 - | sugar transferase TERM 266 301293 - 301277 - G 71 -3.7 -4.73828 | opp_overlap 301277 AGAAGTAAAAAATAA TACCG AGTAAAG CGGTA TATTGGTAAATATCT Pnuc_0311 301792 - 303048 + | polysaccharide biosynthesis protein TERM 267 303613 - 303595 - g 78 -6.6 -4.63218 | TCTTTGGCAATAAAA CCATCACC ACT GGCGAGGG GGGAATGGTTGTGAC Pnuc_0312 303045 - 304208 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 268 304342 - 304361 + G 72 -3 -5.00884 | opp_overlap 304359 GATCTTCATAAGACT TTATTTTT GCCC AAAGATAA TTTTTTAGAAAAACT TERM 269 304393 - 304383 - g 86 -4 -5.56112 | AGAAAAACTAAAAAA GATA AGC TATC CAGTTCGCAATCTAT Pnuc_0313 304222 - 305454 + | glycosyl transferase, group 1 Pnuc_0314 305659 - 306342 + | hexapaptide repeat-containing transferase TERM 270 307230 - 307241 + G 89 -5.8 -5.79595 | opp_overlap 307230, overlap 307232 TAGCTACTCTACCAA CGGT AATG ACCG TTTTTTATTTTGAAA Pnuc_0315 306659 - 307966 + | hypothetical protein Pnuc_0316 309094 - 308012 - | glycosyl transferase family protein TERM 271 308297 - 308319 + g 74 -10.8 -3.2964 | opp_overlap 308296 308295 CATTGCAGAAGAATT TTTATAGAAG GAT CTTCTATAAA TTGTGAAAAGAGTTT TERM 272 309829 - 309847 + G 73 -4.5 -4.85782 | TGAGAATCTAAAGCC CTGCGGT ATGTC ACCACAG TTTGTTTTTCCACCA Pnuc_0317 309377 - 310345 + | glycosyl transferase family protein TERM 273 310673 - 310693 + G 71 -6.9 -4.1899 | opp_overlap 310673 TTTTTGCAGAGGTAA TCAATCGAG CTC CTGGATTGA TTTTGAATAACGTCA TERM 274 310748 - 310722 - g 82 -7.4 -4.64598 | CAATTATGTGAAAAA GGTAGTATTTCC ACT AGAAATATTACC AGTCATTAGTTTTGG Pnuc_0318 310366 - 311208 + | ABC-2 type transporter TERM 275 311771 - 311803 + G 72 -9.4 -3.56821 | gap 1, overlap 311791 GTTGGGGATGCCTTC TTCTCTCAAAA-GTG TATG CGCTTTTTGAGAGAA TTTAAAAAGTCTGGT Pnuc_0319 311198 - 312565 + | ABC transporter related TERM 276 313734 - 313761 + G 71 -3.4 -4.84761 | CTAGAAGTATGCGTT TCACTAAACCCT TGAG AGTGCTTGGTGA TTTTTATAGAAGTAT TERM 277 314903 - 314887 - g 80 -7.3 -4.57543 | opp_overlap 314887 314889, overlap 314889 AAGAAGGAAAAATAA CAGCCAT ATT ATGGCTA ATTTTAGTATTAGAC TERM 278 314901 - 314889 - g 71 -7.7 -3.86437 | opp_overlap 314889 314887, overlap 314887 GAAGGAAAAATAACA GCCAT ATT ATGGC TAATTTTAGTATTAG TERM 279 315003 - 314990 - g 73 -2.5 -5.13016 | AATGAAAATGAAAAA TTTAT ATTT ATAAA CGCATGGAATGAATG TERM 280 315385 - 315369 - g 70 -2.3 -4.99643 | opp_overlap 315371, overlap 315371 TACTAAAAAAAATAA TACATAA AAA TTATGTT GCTATATGCAAAATT Pnuc_0320 312575 - 315823 + | methyltransferase type 11 Pnuc_0321 315851 - 316684 + | methyltransferase type 11 TERM 281 317954 - 317968 + G 72 -5.7 -4.46233 | GGGGATCCGGAGGTG CAGAG ATCAA CTCTG TTTCTTTGGGATTGG Pnuc_0322 316681 - 318021 + | hypothetical protein TERM 282 318757 - 318773 + G 73 -10.9 -2.69799 | overlap 318753 ATATGGCATCCCCAC CTTCCTC ATG GAGGAAG TGCTATATCCAGTCA TERM 283 318956 - 318942 - g 72 -2.8 -4.91712 | TCTAATTCATAAAAA TGTAGA ATT TCAACA TGCAGATCCTCAGCC Pnuc_0323 318052 - 318993 + | phytanoyl-CoA dioxygenase TERM 284 319247 - 319257 + G 80 -6.8 -4.64676 | opp_overlap 319246, overlap 319249 319252 TCTCAAAAAGGTAAT TGGC AAC GCCA TTTTGTTGGCGCTGA TERM 285 319963 - 319940 - g 78 -6.1 -4.56775 | overlap 319926 ACGCCTTTTGAAAAA GCGATTGAA GAAACA TTCAATCAC CCGGTATATAGCAAA Pnuc_0324 319022 - 319996 + | NAD-dependent epimerase/dehydratase TERM 286 320257 - 320239 - g 72 -3 -5.08824 | opp_overlap 320249, overlap 320241 GTTTGAGTGAAAAAA TGCGTTGG ATC CCCACGAA AATGGGGTATTGGTA Pnuc_0325 320007 - 321293 + | hypothetical protein Pnuc_0326 321290 - 321691 + | hypothetical protein TERM 287 321750 - 321761 + T 76 -2.2 -5.42975 | CAATAATTTGGTTCT CGGT GCTT ACTG TTTTTATTTGTATGG Pnuc_0327 322590 - 321841 - | short-chain dehydrogenase/reductase SDR Pnuc_0328 323893 - 322592 - | FAD linked oxidase domain-containing protein Pnuc_0329 324082 - 324966 + | phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase Pnuc_0330 324963 - 325385 + | acid phosphatase/vanadium-dependent haloperoxidase related Pnuc_0331 326543 - 325374 - | hypothetical protein TERM 288 325693 - 325721 + g 82 -3.1 -5.47399 | opp_overlap 325693 325698 325699, overlap 325698 325699 CCAATACATAGTAAA GACAAGGTCTGTA GCC TACAGACGGTTTC TTTTTTTGCAATTAC Pnuc_0332 328021 - 326564 - | hypothetical protein TERM 289 328419 - 328399 - R 89 -11.9 -3.46509 | CGTGAACAATATGAA CCGCAACTC AAA GAGTTGCAG GAGGCTTACGGTGAG Pnuc_0334 329372 - 328785 - | adenylyl-sulfate kinase TERM 290 329429 - 329412 - H 71 -6.3 -4.26076 | TGATTGTTATCAAAA GATCTCC TGGT GAAGATC GTAGTTAATTTCGTT TERM 291 330081 - 330092 + G 72 -3 -4.92791 | opp_overlap 330081 GATTAAATTAGATGA TCAA ACAT TTGA TTTTATTATCTTGTC Pnuc_0335 329767 - 331197 + | glycosyl transferase family protein TERM 292 331245 - 331270 + T 100 -14.9 -4.02534 | opp_overlap 331245 331251, overlap 331251 CGCATGATGAAATAA TAAAAAGGGGC TTTT GCCCCTTTTTA TTTGTGCGTTTGAGT TERM 293 331270 - 331245 - T 100 -14.9 -4.0274 | opp_overlap 331245 331251, overlap 331251 CGCATGATGAAATAA TAAAAAGGGGC TTTT GCCCCTTTTTA TTTGTGCGTTTGAGT TERM 294 331251 - 331264 + T 100 -9.5 -5.38958 | opp_overlap 331245 331251, overlap 331245 ATGAAATAATAAAAA GGGGC TTTT GCCCC TTTTTATTTGTGCGT TERM 295 331264 - 331251 - T 100 -9.5 -5.39905 | opp_overlap 331251 331245, overlap 331245 ATGAAATAATAAAAA GGGGC TTTT GCCCC TTTTTATTTGTGCGT Pnuc_0336 332829 - 331297 - | hypothetical protein TERM 296 331781 - 331796 + g 76 -4 -5.055 | AGTACGTAGAGTGCA TTGCTA TCCA TGGCAA TTTTTTCAGCATTAG TERM 297 333249 - 333266 + G 81 -3.3 -5.43866 | overlap 333261 CTACTCGGAAAGCAT CTCCTCT CTGC AGTGGGG TTTTTTTCAAACTTC TERM 298 334081 - 334108 + G 76 -5 -4.82901 | gap 1, overlap 334069 TGATTGCCATCTTGG CCGTTGGAT-TTA TTC TGACATCCAATGG TTTTTCTGAAAGAGG Pnuc_0337 332901 - 334973 + | acyltransferase 3 Pnuc_0338 335020 - 335916 + | hypothetical protein Pnuc_0339 337035 - 336004 - | sodium/calcium exchanger membrane region TERM 299 337312 - 337324 + G 76 -4.1 -5.00616 | TGCCACTCAAATTAC TATCG TGC CGGTA TTTTTTGGCCAAGGC TERM 300 337378 - 337400 + G 70 -4.9 -4.41348 | gap 1, overlap 337379 GGTGCTGCTGCAGGC TTGCCAGGAA AAAT TTCC-GGCAG TTTCTTTAAGCGCGA Pnuc_0340 337121 - 337486 + | cobalamin (vitamin B12) biosynthesis CbiX protein Pnuc_0341 337549 - 337890 + | hypothetical protein Pnuc_0342 337887 - 338261 + | hypothetical protein Pnuc_0343 339093 - 338272 - | uroporphyrin-III C-methyltransferase TERM 301 338312 - 338322 + g 83 -4.6 -5.4251 | TCGACATCCCTATTA GCGC TAA GTGC TTTTTTCTCTATAGC Pnuc_0344 339717 - 339115 - | hypothetical protein Pnuc_0345 341426 - 339714 - | nitrite/sulfite reductase hemoprotein beta subunit TERM 302 340202 - 340214 + g 77 -3.3 -5.18355 | opp_overlap 340195, overlap 340203 TCAGCAAACCAACGT TTGGC AAT GCCAC TTTTTGCTTTTTAGC TERM 303 341764 - 341790 + G 78 -5.2 -5.09204 | opp_overlap 341767 ATGTCTTAAGGGAAG GTAGCAAAGAAT GGG ATTTTTCGCTGC TTTTTATTCGCCTAT Pnuc_0346 341589 - 341966 + | XRE family transcriptional regulator Pnuc_0347 342028 - 342636 + | hypothetical protein TERM 304 342695 - 342662 - T 71 -6.9 -4.09685 | opp_overlap 342662 TTCCATTCTCTAAAA TTAGTTCAGCCATTT AAAA AAATAACTGCACTAA TTTTTATTTAATTTT TERM 305 342662 - 342695 + T 78 -2.5 -5.43974 | opp_overlap 342662 TTCCATTCTCTAAAA TTAGTTCAGCCATTT AAAA AAATAACTGCACTAA TTTTTATTTAATTTT TERM 306 343121 - 343159 + T 91 -10.5 -4.57304 | opp_overlap 343124 TATATCAAATGCATT GAATATCTAAGACCC TTGCTATTT GGGCCTTAGATATTC TTTATTTAGTTCAAT Pnuc_0348 343509 - 343165 - | death-on-curing family protein TERM 307 343788 - 343807 + r 70 -8 -3.73224 | opp_overlap 343799 AGCTTTCCTTCACTT TTTCAAGA TTAT TCTTGAAA TTTCATGAAAAATCA Pnuc_0349 344224 - 343853 - | hypothetical protein TERM 308 344018 - 343994 - G 71 -7.1 -4.16842 | opp_overlap 343994, overlap 343979 343995 TGCAGCGGCAACAAA GGCTGCTACAG AGC CTGCAGCAACA TACTTGAAGTTGGGA TERM 309 344017 - 343995 - G 73 -10.6 -3.09784 | opp_overlap 343994, overlap 343979 343994 GCAGCGGCAACAAAG GCTGCTACAG AGC CTGCAGCAAC ATACTTGAAGTTGGG Pnuc_0350 344667 - 345245 + | hypothetical protein TERM 310 345291 - 345258 - f 83 -5.3 -5.2166 | gap 1, opp_overlap 345260 345260 345261, overlap 345260 345261 345263 TAATAAGCCAAAAAA TAG-GATCTTCAGGCC ACA AGCCTGAAGAGCACTT TTTATGTCAATGAAA TERM 311 345288 - 345260 - f 77 -8.1 -4.21792 | opp_overlap 345260 345260 345261, overlap 345258 345261 345263 ATAAGCCAAAAAATA GGATCTTCAGGCC ACA AGCCTGAAGAGCA CTTTTTATGTCAATG TERM 312 345260 - 345289 + F 85 -7.2 -4.99035 | gap 1, opp_overlap 345258 345260 345261 345263, overlap 345260 345261 ATAAGCCAAAAAATA G-GATCTTCAGGC CACAA GCCTGAAGAGCAC TTTTTATGTCAATGA TERM 313 345287 - 345261 - f 82 -11.6 -3.11448 | opp_overlap 345261 345260 345260, overlap 345260 345258 345263 TAAGCCAAAAAATAG GATCTTCAGGCC ACA AGCCTGAAGAGC ACTTTTTATGTCAAT TERM 314 345261 - 345287 + F 76 -10.9 -2.74496 | opp_overlap 345260 345258 345261 345263, overlap 345260 345260 TAAGCCAAAAAATAG GATCTTCAGGC CACAA GCCTGAAGAGC ACTTTTTATGTCAAT TERM 315 345285 - 345263 - f 85 -12.8 -3.09579 | opp_overlap 345261 345260 345260, overlap 345261 345260 345258 AGCCAAAAAATAGGA TCTTCAGGCC ACA AGCCTGAAGA GCACTTTTTATGTCA TERM 316 345443 - 345412 - f 83 -5.3 -5.22039 | gap 1, opp_overlap 345412 345414, overlap 345414 GCCAAATCCAAAAAA GAG-CTAGCAAG TTCTAATCC CTTGCTAGCCTC TTTGATGGGCAAGAC TERM 317 345440 - 345414 - f 77 -8.1 -4.23298 | opp_overlap 345414 345412, overlap 345412 CAAATCCAAAAAAGA GCTAGCAAG TTCTAATCC CTTGCTAGC CTCTTTGATGGGCAA TERM 318 345720 - 345732 + G 76 -4.9 -4.76041 | opp_overlap 345720 AAGACTTCGCGAGAA TTACT CAA AGTAA TTTTTAATCGCTATC TERM 319 345853 - 345871 + G 77 -3.8 -5.13354 | opp_overlap 345853 GTGAATCTGAAACCA TGGGTCAA TTT TTAGCCCA TTTATTTTTTCTGCA Pnuc_0351 345477 - 346565 + | acyltransferase 3 TERM 320 346611 - 346568 - T 71 -6 -4.25676 | opp_overlap 346580 346583, overlap 346572 346580 346582 346610 AATCAAACTCTAAAA CGAATTAAAAAACAGGGTGC TATA GCCCCATGTCTTTTAAGACG CGAAAGATTTCACGA TERM 321 346607 - 346572 - T 73 -8.4 -3.70039 | opp_overlap 346580 346583, overlap 346568 346580 346582 AAACTCTAAAACGAA TTAAAAAACAGGGTGC TATA GCCCCATGTCTTTTAA GACGCGAAAGATTTC TERM 322 346599 - 346580 - T 76 -3.4 -5.33921 | opp_overlap 346580 346583, overlap 346572 346568 346582 AAACGAATTAAAAAA CAGGGTGC TATA GCCCCATG TCTTTTAAGACGCGA Pnuc_0352 347114 - 346587 - | hypothetical protein TERM 323 347695 - 347682 - g 72 -8.1 -3.70149 | TGGACAGTATCTAAA CAGCG CTTA CGCTG GCCCATTATGGATAA Pnuc_0353 347229 - 348848 + | choline dehydrogenase Pnuc_0354 348841 - 349764 + | hypothetical protein TERM 324 349934 - 349949 + G 77 -9 -3.9281 | TCGTCACATTTTTGC GGTAGC TGCA GCTACC TTGTTTGCAACTGGT TERM 325 350152 - 350138 - g 73 -4.2 -4.7629 | CGATGAAGCTAAAAA TGAGCG TGG CGTTCA AATCGCACAAGAGTT TERM 326 350662 - 350684 + G 74 -7 -4.27441 | AACCTATGATTGGTA GCTGGACATT GTC AATGGCTAGC TTTATTGATACTGCT Pnuc_0355 349908 - 351092 + | extracellular ligand-binding receptor TERM 327 351182 - 351152 - f 100 -19.8 -4.12188 | opp_overlap 351157, overlap 351157 GCAGCATTTGTAAAA GCAAAGCGCCGCCC AAA AAGCGGCGCTTTGC TTACAATGTCGAATT TERM 328 351157 - 351177 + F 86 -11.1 -3.92625 | opp_overlap 351152 351157 ATTTGTAAAAGCAAA GCGCCGC CCAAAAA GCGGCGC TTTGCTTACAATGTC TERM 329 351177 - 351157 - f 100 -12.5 -4.20136 | opp_overlap 351157, overlap 351152 ATTTGTAAAAGCAAA GCGCCGCCC AAA AAGCGGCGC TTTGCTTACAATGTC Pnuc_0356 351239 - 352117 + | inner-membrane translocator TERM 330 352370 - 352390 + G 73 -9.7 -3.31625 | overlap 352362 352361 TGCCTATCTGGGCTA CGATCCCAG CTT CTGTGATCG TTACTGCTTGCTTTG TERM 331 353598 - 353575 - g 70 -9.6 -3.00525 | opp_overlap 353564 353575, overlap 353570 TTTGGTGAAATGACA GCCATCCAAA ATAT TTTGGTTGGC TTACATCACACTTTT TERM 332 353575 - 353598 + G 70 -9.6 -3.07575 | opp_overlap 353575 353570, overlap 353564 TTTGGTGAAATGACA GCCATCCAAA ATAT TTTGGTTGGC TTACATCACACTTTT Pnuc_0357 352117 - 354048 + | ABC transporter related Pnuc_0358 354080 - 354808 + | ABC transporter related TERM 333 354829 - 354858 + T 90 -10.9 -4.28254 | opp_overlap 354835, overlap 354835 TCTGACTGACTCATG AAAAAAGCCCTTA TCTT TAAGGGCTTTTTC TTTTGGATCTTAGGG TERM 334 354852 - 354835 - T 93 -9.9 -5.1675 | opp_overlap 354829 354835 TGACTCATGAAAAAA GCCCTTA TCTT TAAGGGC TTTTTCTTTTGGATC TERM 335 354835 - 354852 + T 100 -9.9 -5.48213 | opp_overlap 354835, overlap 354829 TGACTCATGAAAAAA GCCCTTA TCTT TAAGGGC TTTTTCTTTTGGATC Pnuc_0359 355383 - 354880 - | hypothetical protein Pnuc_0360 356207 - 355443 - | hypothetical protein TERM 336 356293 - 356257 - R 79 -11.1 -3.1505 | opp_overlap 356249 356261 ATGATCGTTGAGTAA TCCATTGCATTCC ATTTTATAGGG GGAATGCAATGGA TTGAACACTGTGATG Pnuc_0361 357228 - 356314 - | hypothetical protein TERM 337 357274 - 357260 - H 71 -7.2 -3.89215 | GTTGAGAAAGTTAAA TGAGAA CGG TTCTCA ATATAACAAACCAAA Pnuc_0362 357378 - 357620 + | hypothetical protein Pnuc_0363 358658 - 357612 - | DNA/RNA non-specific endonuclease Pnuc_0364 359153 - 360118 + | lytic transglycosylase, catalytic TERM 338 360144 - 360169 + T 100 -12.7 -5.0538 | opp_overlap 360144 360149, overlap 360149 CTTCAGTAGCCAAAA CAAAAGTCACC CTTG GGTGGCTTTTG TTTTTTACGGTAAAA TERM 339 360169 - 360144 - T 89 -10.5 -4.21194 | opp_overlap 360144 360149, overlap 360149 CTTCAGTAGCCAAAA CAAAAGTCACC CTTG GGTGGCTTTTG TTTTTTACGGTAAAA TERM 340 360149 - 360164 + T 93 -6.8 -5.42198 | opp_overlap 360144 360149, overlap 360144 GTAGCCAAAACAAAA GTCACC CTTG GGTGGC TTTTGTTTTTTACGG TERM 341 360164 - 360149 - T 76 -4.6 -5.10933 | opp_overlap 360149 360144, overlap 360144 GTAGCCAAAACAAAA GTCACC CTTG GGTGGC TTTTGTTTTTTACGG Pnuc_0365 360533 - 360186 - | peptidylprolyl isomerase, FKBP-type TERM 342 360487 - 360514 + g 82 -2.6 -5.53288 | overlap 360491 TTACCAGCTTTTGCT TCTGTGCCGTCG CCTA CAACGGTATCGA TTTTTTTGAGTTCAC TERM 343 362615 - 362625 + G 74 -5.4 -4.70659 | overlap 362605 362614 ATTTACGCTGGGATT CTCT CGG AGAG TTTTTGGCTCTAGCG Pnuc_0366 360802 - 363036 + | isocitrate dehydrogenase, NADP-dependent TERM 344 363088 - 363107 + F 100 -8.6 -5.72622 | opp_overlap 363088 GGATTAATATTTAAA GGCAAACT TTCG GGTTTGCC TTTTTTATTTATCAA TERM 345 363107 - 363088 - f 70 -7.9 -3.77831 | opp_overlap 363088 GGATTAATATTTAAA GGCAAAC TTTCGG GTTTGCC TTTTTTATTTATCAA Pnuc_0367 363138 - 363545 + | BLUF domain-containing protein Pnuc_0368 363600 - 364562 + | putative sulfite oxidase subunit YedY Pnuc_0369 364566 - 365120 + | Lipocalin family protein Pnuc_0370 366706 - 365117 - | vinylacetyl-CoA Delta-isomerase TERM 346 365160 - 365203 + g 72 -3 -4.92756 | gap 1, opp_overlap 365110, overlap 365163 GGTACCATCACTGCT TGTCCTGGCGCGCTACAGC CTTGATC GCAGCAGCGC-CCAGGTTG TTTATTTTTCGTAAT TERM 347 365163 - 365200 + g 86 -9.1 -4.53857 | gap 1, overlap 365160 ACCATCACTGCTTGT CCTGGCGCGCTACAGC CTTGATC GCAGCAGCGC-CCAGG TTGTTTATTTTTCGT TERM 348 366778 - 366764 - H 76 -7.2 -4.1897 | opp_overlap 366764 AATCATACACATAAA TTGAAC AGT GTTCAA TAATATAAACATATG Pnuc_0371 366791 - 367474 + | TetR family transcriptional regulator Pnuc_0372 367488 - 368042 + | isochorismatase hydrolase TERM 349 368049 - 368039 - f 75 -2.6 -5.35354 | TAGAGAAGTAAAAAA TTAA TTA TTAA TAGAGACAATACAAG TERM 350 368285 - 368301 + G 73 -8 -4.08767 | GTGGATGTTTTGGCA TCAGCC CTACC GGCTGA TTTTGCAAACGTCAG Pnuc_0373 368072 - 368842 + | short-chain dehydrogenase/reductase SDR Pnuc_0374 369387 - 368839 - | hypothetical protein TERM 351 368922 - 368950 + g 74 -6.8 -4.3586 | gap 1, overlap 368926 TAAAGTCCCATGATT TACAGCCGCCC AAGTAAAG GGGCGGCT-TA TTTTCATCTGGATCA TERM 352 368926 - 368947 + g 87 -10.1 -4.29302 | overlap 368922 GTCCCATGATTTACA GCCGCCC AAGTAAAG GGGCGGC TTATTTTCATCTGGA Pnuc_0375 369474 - 370199 + | pseudouridine synthase TERM 353 370486 - 370466 - g 100 -11.2 -5.04597 | AGTTAGATATAAAAA TGGCATCC TTTAT GGATGCCA TGGCCCTACAGCTTG Pnuc_0376 370207 - 370518 + | transcriptional coactivator/pterin dehydratase Pnuc_0377 370870 - 371184 + | hypothetical protein Pnuc_0378 371814 - 371191 - | hypothetical protein Pnuc_0379 371910 - 372749 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 354 372828 - 372801 - T 100 -15.8 -3.86822 | opp_overlap 372801 372804 372807, overlap 372804 372807 CAATCTGTGCAGAAA TAATAAGGGCTC CTAG GAGCCCTTATTA TTTGCGTTCTAAAGT TERM 355 372801 - 372828 + T 100 -15.8 -3.80893 | opp_overlap 372801 372804 372807, overlap 372804 372807 CAATCTGTGCAGAAA TAATAAGGGCTC CTAG GAGCCCTTATTA TTTGCGTTCTAAAGT TERM 356 372804 - 372825 + T 100 -13.1 -4.03167 | opp_overlap 372801 372804 372807, overlap 372801 372807 TCTGTGCAGAAATAA TAAGGGCTC CTAG GAGCCCTTA TTATTTGCGTTCTAA TERM 357 372825 - 372804 - T 100 -13.1 -4.06419 | opp_overlap 372804 372801 372807, overlap 372801 372807 TCTGTGCAGAAATAA TAAGGGCTC CTAG GAGCCCTTA TTATTTGCGTTCTAA TERM 358 372822 - 372807 - T 89 -10.4 -4.15703 | opp_overlap 372804 372801 372807, overlap 372804 372801 GTGCAGAAATAATAA GGGCTC CTAG GAGCCC TTATTATTTGCGTTC TERM 359 372807 - 372822 + T 86 -10.4 -4.1235 | opp_overlap 372807 372804 372801, overlap 372804 372801 GTGCAGAAATAATAA GGGCTC CTAG GAGCCC TTATTATTTGCGTTC Pnuc_0380 373314 - 372826 - | dihydrofolate reductase Pnuc_0381 374119 - 373325 - | thymidylate synthase TERM 360 373630 - 373612 - G 84 -8.2 -4.64676 | GGACGCCCAAGAAAA TATCAGCA CTT CGCTGATA TAGCTGGCAGGATAA Pnuc_0382 375201 - 374155 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 361 374432 - 374413 - G 81 -12.2 -3.12351 | opp_overlap 374412 374409 374408 GCGCTCTATATCTAA GCCCCATT CAGC AATGGGGC CTAACTTTGGAGAAA Pnuc_0383 375569 - 375246 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnuc_0384 375667 - 376683 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 362 376705 - 376732 + T 100 -15 -4.31835 | opp_overlap 376705 376710 AGCAGCGTAAGCACA TCGAAGTCGAGT AATT ACTCGGCTTCGA TTTCTTCTGGAAGTT TERM 363 376732 - 376705 - T 83 -12.8 -2.91452 | opp_overlap 376705, overlap 376710 AGCAGCGTAAGCACA TCGAAGTCGAGT AATT ACTCGGCTTCGA TTTCTTCTGGAAGTT Pnuc_0385 377012 - 376719 - | hypothetical protein Pnuc_0386 378338 - 377025 - | molybdenum cofactor synthesis domain-containing protein TERM 364 377262 - 377275 + g 75 -6.7 -4.41616 | AGAGATTGCTTGAAT CAGAG GTGG CTCTG TTTGTTTAGCACCAT TERM 365 377447 - 377422 - G 74 -6.8 -4.21936 | opp_overlap 377421 TTGAGAACGCCAAAA GCCATGGGAC GACCGG GCCTCATGGC AATTTTCCAGAAGCC Pnuc_0387 378934 - 378335 - | molybdopterin-guanine dinucleotide biosynthesis protein A moaA 380049 - 378934 - | molybdenum cofactor biosynthesis protein A TERM 366 379594 - 379611 + g 76 -7.7 -4.26076 | gap 1, overlap 379605 379607 AAGACTCACTGTTAA GC-GCTGG AGT CCAGCAGC TTTTAGTGCGGCTGC TERM 367 379744 - 379763 + g 70 -2 -5.0133 | opp_overlap 379740, overlap 379741 TTTGCGAAGTAGCGG TTCACCAC CAGT GAGGCGAA TTTTTTCAACACCTA Pnuc_0389 382772 - 380133 - | ribonuclease TERM 368 380471 - 380485 + g 78 -5.6 -4.76802 | GATTAGATTGACGTG GAGCAC GTG GCGCTC TTTCTTGTTTTTCAG TERM 369 381934 - 381905 - G 76 -12.1 -2.71144 | opp_overlap 381930 CAGTGTGGTCAATGA CGATGGCACCGCC AGAT GGCAGTGGCACCG TACGTGAGTACGCGG TERM 370 382832 - 382856 + H 73 -7.9 -3.82218 | gap 1 GGGACAGGTTAGGTG CCGC-CAAGG ATTAAA CCTTGAGCGG TTTACTAGTGTGGAT TERM 371 383588 - 383563 - g 70 -4.8 -4.38712 | gap 1 GCTATTCCGACAAAA TGCC-CATCCT GTTTG AAGATGAGGCA CTCCTGATTGTGAAT Pnuc_0390 383238 - 384257 + | RluA family pseudouridine synthase Pnuc_0391 384254 - 384943 + | HAD family hydrolase TERM 372 385332 - 385312 - g 77 -11.1 -3.13403 | overlap 385310 TCTTGCGCATCAATA GCCCTGGTG GGT CACCAGTGC AAGCAGGAATGATGA Pnuc_0392 384990 - 385937 + | peptidase S49 TERM 373 385970 - 385999 + T 100 -14.5 -4.36914 | GTGTTGATTTTCATT TAGGCCAATAGTA GAAA TACTGTTGGCCTA TTTTGTAAGGGCGCG Pnuc_0393 386739 - 385969 - | uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase Pnuc_0394 387367 - 386762 - | maf protein Pnuc_0395 387410 - 387985 + | hypothetical protein Pnuc_0396 388091 - 388270 + | ribosomal protein L32 TERM 374 388281 - 388264 - f 85 -2.7 -5.79595 | overlap 388265 GGTTAAAACAAAAAA CGACTAA TTTT TTAGTCT AAACAGATAGAAGCG TERM 375 388313 - 388294 - f 70 -7.8 -3.73008 | opp_overlap 388287 388294 TCTAAACAGATAGAA GCGGCTCC AGTA AAAGCCGC TTTTTTCTTGGATAA TERM 376 388294 - 388313 + F 91 -6.4 -5.4833 | opp_overlap 388294, overlap 388287 TCTAAACAGATAGAA GCGGCT CCAGTAAA AGCCGC TTTTTTCTTGGATAA Pnuc_0397 388354 - 389367 + | fatty acid/phospholipid synthesis protein PlsX Pnuc_0398 389364 - 390350 + | 3-oxoacyl-(acyl-carrier-protein) synthase III Pnuc_0399 390393 - 391328 + | malonyl CoA-acyl carrier protein transacylase Pnuc_0400 391368 - 392111 + | 3-oxoacyl-(acyl-carrier-protein) reductase Pnuc_0401 392212 - 392451 + | acyl carrier protein TERM 377 392488 - 392521 + G 71 -10.3 -2.6472 | gap 1, opp_overlap 392487 392488 GTGTCAGCATCAAAT GGCCGACGCCGGGTAG TTA TTAC-CGGCCTTGGCC TCATCTCACCTGTTG TERM 378 392785 - 392775 - g 79 -8.2 -4.36411 | opp_overlap 392769, overlap 392777 GATTAACGAGCAAAA CGCG GAA CGCG TTGGCGTTATGGTGG Pnuc_0402 392473 - 393720 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 379 395156 - 395168 + G 71 -6.9 -4.1711 | opp_overlap 395156 TCTGGATAGTAATAA GGCCG TTC CGGTC TTTATTCGCCGTGCT Pnuc_0403 393768 - 395219 + | protease Do Pnuc_0404 395366 - 397171 + | GTP-binding protein LepA Pnuc_0405 397171 - 397977 + | signal peptidase I TERM 380 398199 - 398252 + G 84 -7.6 -4.84311 | gap 1 AGGGTGACCTTTCTC GTGTCCGCGCTAATTTG-GTGAAGC AACAG GCTTTATATGAAATAGCGCAGACAC TTTTATTGTCTGACC rnc 397982 - 398773 + | ribonuclease III Pnuc_0407 398776 - 399711 + | GTP-binding protein Era TERM 381 400277 - 400291 + G 79 -9.2 -4.07687 | TACAGGTTGACGACC CCGGTC ATT GGCCGG TTTTGCGGGGGAAGT recO 399718 - 400452 + | DNA repair protein RecO TERM 382 401042 - 401021 - g 72 -5.1 -4.60924 | CAAAGTTCGGAAAAA GCATCGGCT TGAG AGTCAATGC TGGCCACGGATTACA Pnuc_0409 400465 - 401211 + | pyridoxal phosphate biosynthetic protein PdxJ Pnuc_0410 401208 - 401600 + | holo-acyl-carrier-protein synthase Pnuc_0411 401635 - 402708 + | glycoside hydrolase family 3 protein Pnuc_0412 402737 - 403474 + | carbonate dehydratase TERM 383 403520 - 403535 + T 100 -11.8 -5.08169 | opp_overlap 403520 AATGGCAATAAAAAA GCCCGG CATG CCGGGC TTTTTTAACATCTGT TERM 384 403535 - 403520 - T 100 -11.8 -5.4756 | opp_overlap 403520 AATGGCAATAAAAAA GCCCGG CATG CCGGGC TTTTTTAACATCTGT Pnuc_0413 404121 - 403561 - | translation elongation factor P TERM 385 404025 - 404043 + g 76 -8.8 -3.68359 | overlap 404027 TCACAACGGATGAGT TGCGGCCG GAG CGGCTGTA TTCTGCTTTTAAAAC TERM 386 404027 - 404041 + g 70 -9.2 -3.41757 | overlap 404025 ACAACGGATGAGTTG CGGCCG GAG CGGCTG TATTCTGCTTTTAAA Pnuc_0414 405279 - 404209 - | hypothetical protein Pnuc_0415 405332 - 407194 + | excinuclease ABC, C subunit Pnuc_0416 407229 - 407804 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 387 408005 - 408028 + F 86 -8.2 -5.00138 | CCGCTCCAAGTTCGA TGGGAAGC CCTCAAAA GCTTCCCA TTTTTGATTTAGGTA TERM 388 408154 - 408140 - f 73 -8.6 -3.72576 | TTTGCCTTGACGAAA TAGGTG CAT CACCTA AAATACTTTCAGTTA Pnuc_0417 408206 - 408667 + | hypothetical protein TERM 389 408692 - 408710 + T 100 -13.2 -4.93365 | opp_overlap 408692 GTCACGCAATAAAAA GGCCTCTA AGT TAGAGGCC TTTTTCGTTATAGCG TERM 390 408710 - 408692 - T 100 -13.2 -5.10461 | opp_overlap 408692 GTCACGCAATAAAAA GGCCTCTA AGT TAGAGGCC TTTTTCGTTATAGCG Pnuc_0418 409452 - 408733 - | SOS-response transcriptional repressor, LexA Pnuc_0419 409512 - 410588 + | asparaginase/glutaminase TERM 391 410942 - 410932 - g 72 -5.4 -4.4648 | AGTGCGACCAGAAAA CTCT GGA AGAG CTCGAGCATGCGTTC rpsF 410724 - 411098 + | 30S ribosomal protein S6 Pnuc_0421 411159 - 411452 + | putative primosomal replication protein N, PriB TERM 392 411688 - 411652 - g 75 -6.6 -4.38712 | overlap 411661 TTGACTGGCACAAAA GCTAAATATCAGCGTC AGTTA GACACTGCTATCAAGC GTGCTCGTTACTTGG Pnuc_0422 411466 - 411738 + | ribosomal protein S18 Pnuc_0423 411752 - 412204 + | ribosomal protein L9 TERM 393 412322 - 412361 + G 74 -10.8 -3.15663 | gap 1, opp_overlap 412311 412331, overlap 412325 AAAGTTCCACCGCAT TCTGTAGA-AGCCGAGCAA TCT TTGCTCGGCGGTCTGCTGA TTGATAACACTGCCT TERM 394 412325 - 412358 + G 74 -11.1 -2.78216 | gap 1, opp_overlap 412311 412331, overlap 412322 GTTCCACCGCATTCT GTAGA-AGCCGAGCAA TCT TTGCTCGGCGGTCTGC TGATTGATAACACTG TERM 395 412351 - 412331 - g 100 -15.5 -3.30124 | opp_overlap 412325 412322 CCGCATTCTGTAGAA GCCGAGCAA TCT TTGCTCGGC GGTCTGCTGATTGAT Pnuc_0424 412229 - 414724 + | DnaB domain-containing protein TERM 396 414792 - 414764 - T 100 -14.7 -4.46742 | opp_overlap 414770, overlap 414770 AAAGAAATTAATAAA GAAAAAGCCTCGC ATT GCGAGGCTTTTTT AATGCAGCATTCAAA TERM 397 414770 - 414786 + T 100 -13.7 -5.14563 | opp_overlap 414770 414764 ATTAATAAAGAAAAA GCCTCGC ATT GCGAGGC TTTTTTAATGCAGCA TERM 398 414786 - 414770 - T 100 -13.7 -5.48514 | opp_overlap 414770, overlap 414764 ATTAATAAAGAAAAA GCCTCGC ATT GCGAGGC TTTTTTAATGCAGCA Pnuc_0425 415089 - 414823 - | hypothetical protein Pnuc_0426 415985 - 415164 - | MscS mechanosensitive ion channel Pnuc_0427 416544 - 416011 - | NLP/P60 protein TERM 399 416511 - 416487 - G 100 -13.6 -5.30616 | TTATGCAAATAAAAA TGCCGCACCC AATGA GAGTGCGGCA TGAGAGGGCTTTCTT Pnuc_0428 418171 - 416525 - | PhoH family protein TERM 400 416915 - 416934 + g 93 -6.4 -5.64873 | opp_overlap 416915 GAGATTGTCATCAAA TGCACCCA TCCA TGGCTGCA TTTTTTCTTCTTCAG TERM 401 417203 - 417222 + g 73 -4.2 -4.76892 | overlap 417187 417205 417210 ATGAGAAAAATCTCT CAGCGTTT GCAA AAGCGCAG TTTTTCCATTGATCT TERM 402 418216 - 418193 - R 100 -5.3 -5.79595 | gap 1, opp_overlap 418193 418214 TCCTAAAAGAAAAAA CCGCCAA-GC GAAGT GCATTGACGG TTTGTTGCGAAACGA TERM 403 418355 - 418369 + r 79 -10 -3.57971 | ATATGAATTACTTTA CCCCAA ATT TTGGGG TTTGCAACTACCTCT Pnuc_0429 418871 - 418404 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Pnuc_0430 419821 - 418904 - | polysaccharide deacetylase TERM 404 419612 - 419587 - G 73 -4.1 -4.82901 | gap 1 GTCCTGGCAGAAAAA CGCCATACAAAA GGG TTTTG-ATGCCG TAGTGCTCGACTACT Pnuc_0431 420880 - 419834 - | hypothetical protein Pnuc_0432 421785 - 420916 - | hypothetical protein Pnuc_0433 422748 - 421786 - | glycosyl transferase family protein Pnuc_0434 423950 - 422790 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 405 423747 - 423757 + g 72 -5.4 -4.50058 | opp_overlap 423747 GCCAATGCCAGCAAC TTGC AAT GCAA TTTTCATTGTGGCTG Pnuc_0435 425654 - 423960 - | glycosyl transferase family protein Pnuc_0436 426031 - 425654 - | hypothetical protein Pnuc_0437 426111 - 427367 + | aminotransferase AlaT TERM 406 428283 - 428261 - g 75 -9.8 -3.62096 | opp_overlap 428261 TTGTATTACGGTAAA GGCGCTGGCT CTG AGCCAACGGC TTCTGCAGTGATTGC Pnuc_0438 427364 - 428674 + | homoserine dehydrogenase Pnuc_0439 428683 - 430125 + | threonine synthase Pnuc_0440 430157 - 431398 + | molybdenum cofactor synthesis domain-containing protein Pnuc_0441 431417 - 431674 + | molybdopterin converting factor, subunit 1 TERM 407 432081 - 432063 - g 78 -6.6 -4.61482 | overlap 432068 TTCTGGAAAAAAGAA GACACCCC AGA GGGAAGTC GCTGGGTGGATGCGC Pnuc_0442 431676 - 432140 + | molybdopterin biosynthesis protein MoaE TERM 408 432517 - 432500 - g 83 -4.1 -5.40072 | TTGCTCCCAAAAAAA CCGGCAA GCAT TTACCAG TCATGGTTTGGATTC Pnuc_0443 432172 - 433830 + | carboxylesterase, type B TERM 409 433878 - 433863 - f 82 -6.1 -4.8667 | opp_overlap 433863 CATATTTTAGAAAAA CCACC TCTCGG GGTGG TTTTTTGCTTTAAGG TERM 410 433863 - 433878 + F 93 -6.8 -5.37593 | opp_overlap 433863 CATATTTTAGAAAAA CCACCT CTCG GGGTGG TTTTTTGCTTTAAGG TERM 411 435071 - 435081 + G 72 -5.4 -4.46112 | TTCTTTGGTTGGGGT GAGA TTT TCTC TTTATTTCCGTCCAC Pnuc_0444 434063 - 435331 + | major facilitator transporter TERM 412 435356 - 435374 + T 91 -6 -5.46657 | opp_overlap 435356 TGTTGATGGAAAAAA GGCTAC CAAACAA GTAGCC TTTTTTATTGCCATC TERM 413 435374 - 435356 - T 85 -6.7 -5.08824 | opp_overlap 435356 TGTTGATGGAAAAAA GGCTACC AAACA AGTAGCC TTTTTTATTGCCATC Pnuc_0445 437002 - 435404 - | gamma-glutamyltransferase Pnuc_0446 437364 - 437122 - | excinuclease ABC subunit C TERM 414 438274 - 438290 + G 76 -5.1 -4.87665 | opp_overlap 438274 TGATGTTGCTAAGGA TGAAGGT CAA ACCATCA TTTTTATCGATGAGA TERM 415 439941 - 439995 + G 71 -7.2 -4.11216 | opp_overlap 439939 439959 CAAGACCACTCAAGC GTGCTATCCAGCAGCATATTGAAAAC CCC GTTTCCAAGATGATTCTGGAAGGTAC TTTTGGGCCTAAAGA Pnuc_0447 437468 - 440071 + | ATPase Pnuc_0448 440117 - 440872 + | hypothetical protein Pnuc_0449 441866 - 440883 - | hypothetical protein TERM 416 441992 - 442007 + G 76 -9 -3.81879 | CCCTCTTATGCTGAT GGCACA AACC TGTGCC TTATTGGGTTTTGCC TERM 417 442212 - 442235 + G 76 -8.2 -4.15453 | GCAATCGGTTTATTG GGTATGGGAA TTTT TTCCCATAAC TTTTGGACTGCCTTG Pnuc_0450 441951 - 443183 + | major facilitator transporter TERM 418 443671 - 443689 + G 75 -9.6 -3.5594 | opp_overlap 443671 443670 443681 443684, overlap 443681 443684 TGAGATAGAAAGAAT TGGCTATG AAG CATGGCCA TTTGAGCCATCGCTT TERM 419 444510 - 444528 + G 76 -7.4 -4.258 | opp_overlap 444505, overlap 444505 444513 TTGCAGAAAAGTGGG CAGCCTAC TTT GTAGGATG TTTATTGCTGAGTGC Pnuc_0451 443192 - 445627 + | heavy metal translocating P-type ATPase Pnuc_0452 445637 - 445813 + | cytochrome oxidase maturation protein, cbb3-type TERM 420 445915 - 445904 - f 71 -7.2 -3.91196 | opp_overlap 445904, overlap 445905 TTGACATAGATCAAA CCCC CTTA GGGG CCTTACTTTCATAAT Pnuc_0453 445984 - 447426 + | cytochrome c oxidase, cbb3-type, subunit I Pnuc_0454 447437 - 448087 + | cytochrome c oxidase, cbb3-type, subunit II Pnuc_0455 448087 - 448272 + | hypothetical protein Pnuc_0456 448269 - 449207 + | cytochrome c oxidase, cbb3-type, subunit III TERM 421 449299 - 449313 + G 71 -3.4 -4.7497 | GAAAGATTTATCCGC GCTCTG TAT CTGGGC TTTTTGCTCGGTGGC Pnuc_0457 449211 - 450668 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnuc_0458 450684 - 450902 + | hypothetical protein Pnuc_0459 450899 - 451159 + | putative transmembrane protein Pnuc_0460 451926 - 451156 - | CRP/FNR family transcriptional regulator TERM 422 452127 - 452141 + G 82 -2.8 -5.47159 | CGGAGACCCCTTTGC GCTC CAAATCC GAGC TTTTTTATCTTCAAC Pnuc_0461 452000 - 452719 + | putative transmembrane protein TERM 423 452698 - 452715 + T 74 -9.1 -3.48269 | opp_overlap 452698 TGAAGCATTATTAAA GGGAGGC TTTT GCCTCTC TTAGTCTTTAGTAAA Pnuc_0462 453214 - 452813 - | hypothetical protein Pnuc_0463 453310 - 453750 + | UspA domain-containing protein TERM 424 453764 - 453792 + T 91 -13.3 -3.07622 | opp_overlap 453771, overlap 453771 AAGTTTGCTTCGCTT AAAAAAAGGGTCC AAT GGACCCTTTTTTA TTACCTACGCTGTAT TERM 425 453785 - 453771 - T 100 -11.4 -5.40072 | opp_overlap 453771 453764 CTTCGCTTAAAAAAA GGGTCC AAT GGACCC TTTTTTATTACCTAC TERM 426 453771 - 453785 + T 100 -11.4 -5.4833 | opp_overlap 453771, overlap 453764 CTTCGCTTAAAAAAA GGGTCC AAT GGACCC TTTTTTATTACCTAC Pnuc_0464 455268 - 453814 - | peptidase M23B Pnuc_0465 456233 - 455301 - | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding Pnuc_0466 456342 - 457475 + | mandelate racemase/muconate lactonizing protein TERM 427 457546 - 457517 - T 100 -19.5 -4.08216 | opp_overlap 457517 457520 457524, overlap 457520 457524 TCAGGTCGTCCAAAA CAATAAAGCCCGC AATT GCGGGCTTTATTG TTTGATAGCGATTAA TERM 428 457517 - 457546 + T 100 -19.5 -3.74747 | opp_overlap 457517 457520 457524, overlap 457520 457524 TCAGGTCGTCCAAAA CAATAAAGCCCGC AATT GCGGGCTTTATTG TTTGATAGCGATTAA TERM 429 457520 - 457543 + T 100 -15.4 -4.0031 | opp_overlap 457517 457520 457524, overlap 457517 457524 GGTCGTCCAAAACAA TAAAGCCCGC AATT GCGGGCTTTA TTGTTTGATAGCGAT TERM 430 457543 - 457520 - T 100 -15.4 -4.17048 | opp_overlap 457520 457517 457524, overlap 457517 457524 GGTCGTCCAAAACAA TAAAGCCCGC AATT GCGGGCTTTA TTGTTTGATAGCGAT TERM 431 457524 - 457539 + T 95 -11.8 -4.60258 | opp_overlap 457520 457517 457524, overlap 457520 457517 GTCCAAAACAATAAA GCCCGC AATT GCGGGC TTTATTGTTTGATAG TERM 432 457539 - 457524 - T 100 -11.8 -4.67697 | opp_overlap 457524 457520 457517, overlap 457520 457517 GTCCAAAACAATAAA GCCCGC AATT GCGGGC TTTATTGTTTGATAG Pnuc_0467 459570 - 457558 - | TRAP transporter, 4TM/12TM fusion protein TERM 433 457697 - 457709 + g 72 -2.7 -5.08824 | opp_overlap 457706, overlap 457698 ACCATGATGATGCGC TCAAA AAT TTTGG TTTTTTCAATAAACC TERM 434 459659 - 459620 - R 87 -8.7 -4.57353 | opp_overlap 459620 459621 459623 459631, overlap 459621 459631 TGTTACTACATAAAA CCAGAAAAAAAGGGGGT TGACCC ACCCTCTTTTTTCCTGC TTAATTTACTTTGGC TERM 435 459620 - 459659 + r 73 -8.7 -3.65514 | opp_overlap 459620 459621 459631, overlap 459621 459623 459631 TGTTACTACATAAAA CCAGAAAAAAAGGGGGT TGACCC ACCCTCTTTTTTCCTGC TTAATTTACTTTGGC TERM 436 459621 - 459658 + r 81 -12.2 -2.78586 | opp_overlap 459620 459621 459631, overlap 459620 459623 459631 GTTACTACATAAAAC CAGAAAAAAAGGGGGT TGACCC ACCCTCTTTTTTCCTG CTTAATTTACTTTGG TERM 437 459658 - 459621 - R 86 -12.2 -3.3393 | opp_overlap 459621 459620 459623 459631, overlap 459620 459631 GTTACTACATAAAAC CAGAAAAAAAGGGGGT TGACCC ACCCTCTTTTTTCCTG CTTAATTTACTTTGG TERM 438 459631 - 459648 + r 83 -4.8 -5.2189 | opp_overlap 459621 459620 459631, overlap 459623 459621 459620 AAAACCAGAAAAAAA GGGGGT TGACCC ACCCTC TTTTTTCCTGCTTAA TERM 439 459644 - 459631 - R 88 -3.7 -5.77632 | opp_overlap 459631 459623 459621 459620, overlap 459621 459620 AAAACCAGAAAAAAA GGGGG TTGA CCCAC CCTCTTTTTTCCTGC Pnuc_0468 460610 - 459660 - | TRAP transporter solute receptor TAXI family protein Pnuc_0469 461564 - 460638 - | dihydrodipicolinate synthetase TERM 440 461585 - 461603 + r 83 -9.6 -3.88232 | opp_overlap 461584, overlap 461586 CTCCGATTTAATTAT TCACTTCC GAG GGAAGTGG TTGTTGTGTAAAGAA TERM 441 461586 - 461602 + r 78 -10.9 -2.92618 | opp_overlap 461584, overlap 461585 TCCGATTTAATTATT CACTTCC GAG GGAAGTG GTTGTTGTGTAAAGA Pnuc_0470 462506 - 461577 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 442 461952 - 461927 - G 73 -2.5 -5.10461 | opp_overlap 461935, overlap 461932 GGCACGCAAGAAAAA GGACATCGCTA GCTT TAGCAAGTTCC TGAATGCTTTGGTAA TERM 443 463079 - 463058 - g 70 -2.3 -5.03314 | gap 1, opp_overlap 463058 463075, overlap 463060 TTTATGGTGAAAAAA CT-TCACCCA TGG TTGGTGACAG TCTGTCTAGATTGAT Pnuc_0471 462592 - 463533 + | 3-hydroxyacyl-CoA dehydrogenase Pnuc_0472 464759 - 463554 - | major facilitator transporter TERM 444 465393 - 465347 - g 77 -7.2 -4.55295 | opp_overlap 465360, overlap 465348 465349 465351 CTGGCGATAAAGAAA TTGACCCAAGCGAGGAGGCAAA GTA TCTGCCTACTGACTTGGGCCGC GCCTCCAAAGATGGA TERM 445 465392 - 465348 - g 77 -10.7 -3.32695 | opp_overlap 465360, overlap 465347 465349 465351 TGGCGATAAAGAAAT TGACCCAAGCGAGGAGGCAAA GTA TCTGCCTACTGACTTGGGCCG CGCCTCCAAAGATGG TERM 446 465391 - 465349 - g 83 -14.2 -2.59135 | opp_overlap 465360, overlap 465348 465347 465351 GGCGATAAAGAAATT GACCCAAGCGAGGAGGCAAA GTA TCTGCCTACTGACTTGGGCC GCGCCTCCAAAGATG TERM 447 465389 - 465351 - g 82 -13.2 -2.82776 | opp_overlap 465360, overlap 465349 465348 465347 CGATAAAGAAATTGA CCCAAGCGAGGAGGCAAA GTA TCTGCCTACTGACTTGGG CCGCGCCTCCAAAGA TERM 448 465395 - 465410 + G 72 -9 -3.53343 | CTGACTTGGGCCGCG CCTCCA AAGA TGGAGG TTTACAGCGCGCCTT Pnuc_0473 464803 - 465483 + | cytochrome B561 Pnuc_0474 465936 - 465484 - | cytochrome c, class II Pnuc_0475 466726 - 466007 - | peptidase M50 TERM 449 466300 - 466286 - G 78 -5.6 -4.81551 | opp_overlap 466287, overlap 466287 CATGGAGATGAAAAA GGGCTC TTG GAGACC AATACCCTGTACTAC TERM 450 466970 - 466955 - H 76 -3.3 -5.24551 | overlap 466949 CGAAATCAACAAAAA GATCA TCACTT TGATC GTAATGTTGGCTATC Pnuc_0476 467058 - 467837 + | extradiol ring-cleavage dioxygenase III subunit B Pnuc_0477 467849 - 468226 + | CrcB protein Pnuc_0478 469226 - 468249 - | hypothetical protein Pnuc_0479 469784 - 469242 - | chromate transporter Pnuc_0480 470299 - 469763 - | chromate transporter Pnuc_0481 471294 - 470317 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pnuc_0482 472690 - 471317 - | MmgE/PrpD family protein Pnuc_0483 473742 - 472738 - | hypothetical protein TERM 451 473725 - 473712 - G 100 -8.1 -5.69473 | CATAGGATAAAAAAA TCGGC GCGC GCCGA TTAGAGGTTTTAGTC Pnuc_0484 474607 - 473825 - | rhodanese domain-containing protein TERM 452 473938 - 473915 - G 74 -3.9 -4.91852 | overlap 473911 CTCATCAAAAACAAA GCAGCTGC-CT TTGT AGTGC-GCTGC ACCAACTTCTTCAAA TERM 453 475214 - 475234 + G 77 -6.8 -4.4078 | TCATTTAGCGATGGC CCGCCTTG CTAAA CAAGCCGG TTTTGATTGGAACCA Pnuc_0485 474684 - 475685 + | hypothetical protein TERM 454 475749 - 475784 + G 100 -14 -4.40298 | opp_overlap 475749 GCAGAACCCGCAGAA TTGGTTGCCGCGATTC GCAA GAGACGCGGCGGCCAA TTTATTAATTTAGAT Pnuc_0486 475695 - 476246 + | carboxymuconolactone decarboxylase TERM 455 477075 - 477092 + G 74 -3.5 -5.02606 | overlap 477076 477082 CGAACAGGCCATTGA TGATTAT CAAA ATAATCG TTTTGTTATTTCCTA Pnuc_0487 476254 - 477108 + | pirin domain-containing protein Pnuc_0488 477109 - 478278 + | methyltransferase small TERM 456 478349 - 478379 + G 74 -11.3 -2.8474 | opp_overlap 478349, overlap 478346 CTGCAAAACAACCAA TTTCTTGAGGCGG AATCC CTGCTTCAAGAAA TGCTTCTGGCTAGCC TERM 457 478697 - 478685 - g 72 -4.8 -4.7254 | overlap 478688 ACTTGTTATGAAAAA GCAG TTGTT CTGC AACCCCAAATGGCTG Pnuc_0489 478310 - 480166 + | TPR repeat-containing protein TERM 458 480212 - 480179 - T 100 -13.3 -4.17762 | opp_overlap 480184, overlap 480184 TAGGCTTTAAAACAA CAAAACCCCTCATTC ATTT GAAAGAAGGGTTTTG GCGCAGCCGTAAAAT TERM 459 480207 - 480184 - T 86 -7.4 -5.093 | opp_overlap 480184, overlap 480179 TTTAAAACAACAAAA CCCCTCATTC ATTT GAAAGAAGGG TTTTGGCGCAGCCGT Pnuc_0490 481339 - 480665 - | phosphoglycolate phosphatase Pnuc_0491 482025 - 481336 - | ubiquinone biosynthesis O-methyltransferase TERM 460 482099 - 482083 - R 100 -13.7 -5.64421 | opp_overlap 482083 AGCGGAAATAAAAAA GCCCGCT AAA AGCGGGC TTTTTTACAAGTAAA TERM 461 482083 - 482099 + r 100 -13.7 -5.03314 | opp_overlap 482083 AGCGGAAATAAAAAA GCCCGCT AAA AGCGGGC TTTTTTACAAGTAAA Pnuc_0492 482683 - 482120 - | OmpA/MotB domain-containing protein TERM 462 485032 - 485005 - g 76 -7.6 -4.25283 | ACGCTTTGATGAAAA CGACGTTCGTCC AATG GGCCGAACAGCG CGCGGTGTGCGTGGC Pnuc_0493 482843 - 485545 + | DNA gyrase subunit A TERM 463 486414 - 486400 - g 73 -2.1 -5.1963 | overlap 486390 CGCAACCAAGAAAAA GCAGA TTTGC TCTAC AGCTTCTTGGACCAA Pnuc_0494 485572 - 486669 + | phosphoserine aminotransferase TERM 464 486731 - 486712 - g 80 -5.8 -5.00616 | gap 1, opp_overlap 486700 486712 486712, overlap 486716 CCTTGCGTGAAAAAA TTGACGCAT TGG ATGCG-CAA ATTTTAGATTTACTG Pnuc_0495 486669 - 487748 + | chorismate mutase TERM 465 488602 - 488615 + G 76 -8.1 -4.11216 | AGTCTTGCTCAGGCA GCTGC TATT GCAGC TTTTCAAGATCAGGC TERM 466 488666 - 488687 + G 72 -6.5 -4.30978 | AGCTTAATCTTGCTG GCTATGGTC AACT GACCACGGC TTTTGATGAATTGGG Pnuc_0496 487798 - 488922 + | histidinol-phosphate aminotransferase Pnuc_0497 488942 - 489823 + | prephenate dehydrogenase Pnuc_0498 489823 - 491151 + | 3-phosphoshikimate 1-carboxyvinyltransferase Pnuc_0499 491156 - 491818 + | cytidylate kinase TERM 467 492736 - 492722 - g 82 -5.6 -5.1244 | opp_overlap 492724 492724, overlap 492714 492724 CGATCAAGAGAAAAA CCGTGT TTC ACTCGG CGTGAAACAACTTGG rpsA 491964 - 493637 + | 30S ribosomal protein S1 TERM 468 493642 - 493675 + F 89 -9.5 -4.258 | opp_overlap 493643 493645, overlap 493645 ATCAAGGCTAAATCA ATATCGCCGCTCTCC ATGA GGAGGGTGGCGATTC TTTATTGATAGATCA TERM 469 493674 - 493643 - f 72 -8.6 -3.54489 | opp_overlap 493642 493645, overlap 493645 TCAAGGCTAAATCAA TATCGCCGCTCTCC ATGA GGAGGGTGGCGATT CTTTATTGATAGATC TERM 470 493645 - 493672 + F 100 -15.6 -4.24413 | opp_overlap 493643 493645, overlap 493642 AAGGCTAAATCAATA TCGCCGCTCTCC ATGA GGAGGGTGGCGA TTCTTTATTGATAGA TERM 471 493672 - 493645 - f 85 -11.2 -3.34267 | opp_overlap 493645 493642, overlap 493643 AAGGCTAAATCAATA TCGCCGCTCTCC ATGA GGAGGGTGGCGA TTCTTTATTGATAGA Pnuc_0501 493690 - 494034 + | integration host factor, beta subunit TERM 472 494054 - 494069 + F 100 -6.8 -6.01187 | CAGGCTCATCCTCAG TGGTCC ATTC GGGCCA TTTTTTTATTTAATT Pnuc_0502 494095 - 495306 + | hypothetical protein Pnuc_0503 495341 - 496705 + | UDP-glucose 6-dehydrogenase TERM 473 497477 - 497466 - g 74 -7.2 -4.19817 | opp_overlap 497466, overlap 497467 GTGAGCCATGTAAAA GCGC AAGC GCGC GAAGTGTTTGACGTA Pnuc_0504 496683 - 497645 + | rfaE bifunctional protein Pnuc_0505 497642 - 498670 + | ADP-L-glycero-D-manno-heptose-6-epimerase Pnuc_0506 498679 - 499419 + | hypothetical protein TERM 474 499499 - 499523 + F 100 -12.9 -5.4505 | opp_overlap 499496 499499 CTTCGTTGTAAACGA TCCACGCACAC TTT GTGTCCGTGGA TTTTTTATTAACCAA TERM 475 499523 - 499499 - f 90 -12.9 -2.90496 | opp_overlap 499499, overlap 499496 CTTCGTTGTAAACGA TCCACGCACAC TTT GTGTCCGTGGA TTTTTTATTAACCAA Pnuc_0507 499549 - 499977 + | helix-hairpin-helix DNA-binding motif-containing protein Pnuc_0508 500019 - 500930 + | cysteine synthase B Pnuc_0509 502201 - 500933 - | lytic murein transglycosylase B TERM 476 501529 - 501548 + g 72 -5.7 -4.4078 | overlap 501531 ATTGAGGCAATCCTA TAGCTCC AGCGTA GGAGCTG TTTTGATTCAGGCAA TERM 477 501987 - 502028 + g 72 -10.3 -2.93447 | overlap 501986 GGAATCGTTTTAGCA TCAAGAAAGCCCGTTTGTA GGGT TGAAAGCGGGATTTCTTGA GTTTCTGAGACTTGA TERM 478 502953 - 502965 + G 72 -9.1 -3.60818 | CTATTGTGGATGAGC GCTGG ATG CCAGC TTTAAGAAATTTTGA Pnuc_0510 502286 - 503206 + | histone deacetylase superfamily protein Pnuc_0511 503250 - 504905 + | AMP-dependent synthetase and ligase Pnuc_0512 504987 - 505736 + | electron transfer flavoprotein beta-subunit TERM 479 505807 - 505782 - g 71 -10.5 -2.73007 | opp_overlap 505780 505800, overlap 505781 AATATTTCTTTAAAG GCTGCAACG CTCAATGC CGTTGCAGC AGCTTTGCAATGCGC Pnuc_0513 505737 - 506672 + | electron transfer flavoprotein, alpha subunit TERM 480 507972 - 507989 + G 71 -7.7 -3.85817 | AGTTTAGGGGTGCAG GTCCATG GTGG CATGGGC TTTATAGAGGAGACT Pnuc_0514 506733 - 508520 + | acyl-CoA dehydrogenase domain-containing protein TERM 481 508553 - 508576 + T 74 -3.9 -5.1101 | opp_overlap 508553 CATCAAGCTCAAAAA GCTATCC GCTATTACTG GGATAGC TTTTTTGCCTCATAA Pnuc_0515 509010 - 508564 - | putative transmembrane protein TERM 482 508644 - 508634 - G 80 -5.4 -5.04385 | overlap 508621 GAGATGGCTAAAAAA GTCA TCA TGAC ACCGGCCCCAAGAAC TERM 483 508736 - 508746 + g 82 -6.8 -4.8048 | opp_overlap 508735 508736 ATATTCGGGTTAAAT TGGG CGT CCCA TTTTTCATCTGGACG Pnuc_0516 509553 - 509023 - | protein of unknown function DUF306, Meta and HslJ TERM 484 509801 - 509821 + G 72 -5.3 -4.58663 | overlap 509802 CATTCGACTGGCACG CGGCGGTTC TAA GAAGCGCCC TTTTTACAGCATCGT TERM 485 509802 - 509820 + G 70 -8.8 -3.34716 | overlap 509801 ATTCGACTGGCACGC GGCGGTTC TAA GAAGCGCC CTTTTTACAGCATCG Pnuc_0517 509778 - 510023 + | ribosomal protein S16 TERM 486 510025 - 510073 + F 91 -8.2 -5.31158 | ATCCAGCTGTTTAAT TCCGTTTGCTGAGATCTTCATC TTGAT GGTGAAGATGTCGGCGATAGGA TTTTTAGTTTTTTTA Pnuc_0518 510115 - 510681 + | 16S rRNA processing protein RimM Pnuc_0519 510699 - 511445 + | tRNA (guanine-N1)-methyltransferase Pnuc_0520 511572 - 511961 + | ribosomal protein L19 TERM 487 511999 - 511984 - f 87 -6 -5.27335 | opp_overlap 511984, overlap 511978 GGCTTGAAATAAAAA GGCGGC TTAG GTCGCC TTTTTTGTTACCTTA TERM 488 511984 - 511999 + F 93 -8.2 -5.5074 | opp_overlap 511978 511984 GGCTTGAAATAAAAA GGCGGC TTAG GTCGCC TTTTTTGTTACCTTA Pnuc_0521 512025 - 512762 + | NUDIX hydrolase Pnuc_0523 514676 - 513663 - | ribosome small subunit-dependent GTPase A Pnuc_0522 512759 - 513718 + | cobalamin biosynthesis protein CbiB TERM 489 513771 - 513793 + gT 100 -13.5 -4.19648 | opp_overlap 513771 ACGAAGTTGTCTAAA TAGCGCCAG TCTTT CTGGCGCTA TTTCATTTCTATCTA TERM 490 513793 - 513771 - GT 95 -13.5 -3.55801 | opp_overlap 513771 ACGAAGTTGTCTAAA TAGCGCCAG TCTTT CTGGCGCTA TTTCATTTCTATCTA TERM 491 514164 - 514148 - GT 75 -2.9 -5.14163 | ATTGACCAACAAAAA CAGAGAC CTT GCCTTTG AGGGCAGACTGTAGC Pnuc_0524 515932 - 514679 - | Ste24 endopeptidase TERM 492 515309 - 515323 + g 71 -7.2 -4.15044 | TTTGAGCGCACCTTC TTCCAA GGC TTGGAA TTTATTAAAGAGGGG TERM 493 515482 - 515458 - G 88 -12.2 -3.5361 | gap 1, overlap 515449 GAATGACCCACAGAA GTGGGATGCCG ATTG CGGCA-CCCAC AAGAAGACCTTTAAG Pnuc_0525 515948 - 516535 + | oligoribonuclease TERM 494 516560 - 516537 - T 89 -9.6 -4.30719 | opp_overlap 516537 516540 CGTTGCCACAATAAA TAAGGTCCGC ATGA GCGTACCTTA TTACTTCAGGCTTGG TERM 495 516537 - 516560 + T 75 -9.6 -3.35867 | opp_overlap 516537, overlap 516540 CGTTGCCACAATAAA TAAGGTCCGC ATGA GCGTACCTTA TTACTTCAGGCTTGG Pnuc_0526 517214 - 516591 - | molybdenum cofactor synthesis domain-containing protein Pnuc_0527 517241 - 518587 + | peptidase U62, modulator of DNA gyrase Pnuc_0528 518644 - 519726 + | TRAP dicarboxylate transporter- DctP subunit TERM 496 519759 - 519774 + F 100 -10.4 -5.69473 | opp_overlap 519759 ATGGACTCGTTGAAA GGGCTC TATG GAGCCC TTTTTTTCTAATCTA TERM 497 519774 - 519759 - f 79 -10.4 -3.54543 | opp_overlap 519759 ATGGACTCGTTGAAA GGGCTC TATG GAGCCC TTTTTTTCTAATCTA Pnuc_0529 519840 - 521111 + | putative manganese transport protein TERM 498 521178 - 521193 + G 86 -3.2 -5.72622 | AAGTCAATCCTTTCA TGCCCA TACA TTGGCA TTTTTTGTTTGTGCA TERM 499 521842 - 521871 + G 81 -5.1 -5.15167 | gap 1, opp_overlap 521851, overlap 521851 TTAGCGAAGCGTATT TCG-ATGAAATGGT ACT ACCATATCGTACGA TTTTTCTTGCTGGTC Pnuc_0530 521137 - 521922 + | hypothetical protein Pnuc_0531 522584 - 521919 - | phospholipase/carboxylesterase TERM 500 522396 - 522374 - G 86 -11.4 -3.72027 | AGTCTCTACCAATAA TGTCATACCA GGC TGGCATGACA TATCCGCCATTGACT Pnuc_0532 522799 - 523026 + | hypothetical protein Pnuc_0533 523027 - 523401 + | hypothetical protein Pnuc_0534 523906 - 524214 + | hypothetical protein TERM 501 524236 - 524247 + G 72 -5.8 -4.43681 | TAGAAAAATTATTGT GTGC ATTA GCAC TTTTAGTATTGCCTG TERM 502 524412 - 524392 - g 79 -8.3 -4.25104 | opp_overlap 524393 524396, overlap 524393 GGGCCGCTACTAAAA CGAAGTCTG CTG CAGACTTCT ATACTGGTGGTGGTG TERM 503 524393 - 524411 + G 77 -11.8 -2.83894 | opp_overlap 524393 524392, overlap 524396 GGCCGCTACTAAAAC GAAGTCTG CTG CAGACTTC TATACTGGTGGTGGT TERM 504 524411 - 524393 - g 79 -11.8 -3.14848 | opp_overlap 524393 524396, overlap 524392 GGCCGCTACTAAAAC GAAGTCTG CTG CAGACTTC TATACTGGTGGTGGT TERM 505 525663 - 525677 + G 76 -9.2 -3.71487 | opp_overlap 525660 525659 TGCACCACTAAGGGC GCCGTC ATC GGCGGC TTCTTGGGTCTCGTG Pnuc_0535 524211 - 525938 + | SSS family solute/sodium (Na+) symporter TERM 506 525992 - 525963 - T 83 -10.9 -3.69434 | opp_overlap 525970, overlap 525969 525970 GGAACTAAGTTCAAA TAAAAAGCCAGGA GTAA TCCTGGTTTTTTA TTGGGCGCTCACTTT TERM 507 525986 - 525969 - T 85 -5.5 -5.29846 | opp_overlap 525970, overlap 525963 525970 AAGTTCAAATAAAAA GCCAGGA GTAA TCCTGGT TTTTTATTGGGCGCT TERM 508 525970 - 525985 + T 95 -9 -5.4505 | opp_overlap 525970 525969 525963 AGTTCAAATAAAAAG CCAGGA GTAA TCCTGG TTTTTTATTGGGCGC TERM 509 525985 - 525970 - T 76 -9 -3.76281 | opp_overlap 525970, overlap 525969 525963 AGTTCAAATAAAAAG CCAGGA GTAA TCCTGG TTTTTTATTGGGCGC Pnuc_0536 526664 - 526008 - | DNA polymerase III subunit epsilon Pnuc_0537 528490 - 526661 - | CBS domain-containing protein Pnuc_0538 529392 - 528595 - | hypothetical protein Pnuc_0539 530348 - 529470 - | Citryl-CoA lyase Pnuc_0540 533180 - 530493 - | GCN5-related N-acetyltransferase Pnuc_0541 533585 - 534193 + | glutathione S-transferase domain-containing protein TERM 510 534256 - 534239 - f 81 -5.5 -5.00895 | opp_overlap 534239 GTTAGGATATAAAAA GCGCTGA GCCA CCAGCAC CTTTTTGAGATTGAG Pnuc_0542 534279 - 534749 + | hypothetical protein Pnuc_0543 534811 - 535731 + | protein tyrosine/serine phosphatase Pnuc_0544 535807 - 536184 + | hypothetical protein TERM 511 536182 - 536208 + F 73 -5.8 -4.65838 | overlap 536185 GATTTGATTGCATCC TAGGGTAAGCAG GGC CTGCATACCTTC TTTTTGCAGTGTATA TERM 512 536185 - 536205 + F 90 -9.7 -4.43351 | overlap 536182 TTGATTGCATCCTAG GGTAAGCAG GGC CTGCATACC TTCTTTTTGCAGTGT TERM 513 536585 - 536606 + G 78 -6.7 -4.70169 | gap 1, opp_overlap 536584, overlap 536575 CAAGTCCATCAAAGT GGTAAGTTAG AAC CTAACT-ACC TTTTCTTGGATGTCG Pnuc_0545 536303 - 537730 + | putative cytochrome c1 signal peptide protein Pnuc_0546 537748 - 538497 + | cytochrome c, class I Pnuc_0547 539269 - 538550 - | phytochelatin synthase, putative Pnuc_0548 539411 - 539968 + | hypothetical protein TERM 514 540014 - 540029 + F 79 -3.3 -5.47399 | opp_overlap 540003 GAATTACTAGAGTAG TATGG CTAACA CCATA TTTTTTTAGGATTAA Pnuc_0549 540045 - 540578 + | hypothetical protein Pnuc_0550 540684 - 541982 + | secretory lipase TERM 515 542029 - 542042 + T 85 -3.7 -5.58209 | opp_overlap 542029 CAAGAAATTCTAAAA CCACC TTCG GGCGG TTTTTTTAGCTTTAA Pnuc_0551 542494 - 542060 - | hypothetical protein TERM 516 542419 - 542401 - G 76 -8.8 -3.75738 | overlap 542398 CACCAGCATCAAGAA CTGCCACA GTT TGTGGCTG AAAGTCTAAGGATTC TERM 517 543669 - 543695 + G 76 -8.1 -4.10161 | CTGGGTCCAATTTGC TATTCCTCTGG AGTGC CTGGAGGAATA TTTTCACCCATCCTA Pnuc_0552 542685 - 543998 + | Cl- channel, voltage-gated family protein Pnuc_0553 544093 - 545823 + | thiamine pyrophosphate binding domain-containing protein Pnuc_0554 546274 - 546594 + | hypothetical protein Pnuc_0555 547835 - 546612 - | cytochrome c, class I TERM 518 547775 - 547762 - G 70 -2.3 -5.09245 | overlap 547763 547771 GCAAAAGCATAAAAA GGTGC AAAG GCAAC GGTTGCACAAAAAAA Pnuc_0556 547934 - 548371 + | DoxX family protein TERM 519 548772 - 548787 + G 73 -7.6 -4.08692 | opp_overlap 548772 AGCAAAAGGAAAAAA GAAACC ATTT GGTTTC TTTTCGGGCAGCTTA TERM 520 548787 - 548772 - g 100 -7.6 -5.48054 | opp_overlap 548772 AGCAAAAGGAAAAAA GAAACC ATTT GGTTTC TTTTCGGGCAGCTTA Pnuc_0557 548422 - 548826 + | hypothetical protein TERM 521 549388 - 549424 + T 86 -9.7 -3.97947 | gap 1, opp_overlap 549388 549395, overlap 549395 TTTCAAAGCCTCAAA TGAAAAAGCCCTTGAA CATTCA TTCAGGGGC-TTTTCA TTTCTAGTGAATCAG TERM 522 549424 - 549388 - T 70 -8.2 -3.63968 | gap 1, opp_overlap 549388 549395, overlap 549395 TTTCAAAGCCTCAAA TGAAAAAGCCCTTGAAC ATTC ATTCAGGGGC-TTTTCA TTTCTAGTGAATCAG TERM 523 549418 - 549395 - T 85 -7.4 -4.98531 | opp_overlap 549395 549388, overlap 549388 GCCTCAAATGAAAAA GCCCTTGAAC ATTC ATTCAGGGGC TTTTCATTTCTAGTG TERM 524 549395 - 549418 + T 88 -8.9 -4.63479 | opp_overlap 549388 549395, overlap 549388 GCCTCAAATGAAAAA GCCCTTGAA CATTCA TTCAGGGGC TTTTCATTTCTAGTG TERM 525 549483 - 549501 + T 71 -7.4 -3.84825 | CCAACTCATTGATTA CTGTGTAG CAG CAACACAG TTTGGTATCAATAAG Pnuc_0558 549914 - 549480 - | hypothetical protein Pnuc_0559 550161 - 550904 + | putative transmembrane protein Pnuc_0560 550908 - 551120 + | hypothetical protein Pnuc_0561 551541 - 551164 - | hypothetical protein TERM 526 552134 - 552119 - R 84 -10.4 -3.82084 | opp_overlap 552119 TTTGAATATTAACAA CCACCC TCCG GGGTGG TTTTTTTATCAACAC TERM 527 552119 - 552134 + r 100 -10.4 -5.60993 | opp_overlap 552119 TTTGAATATTAACAA CCACCC TCCG GGGTGG TTTTTTTATCAACAC Pnuc_0562 552859 - 552152 - | hypothetical protein Pnuc_0563 554638 - 552863 - | integral membrane sensor hybrid histidine kinase TERM 528 554022 - 554045 + g 76 -7.5 -4.35524 | overlap 554016 GTATTACGCTCAAGC TCAAGCGCT TTATTC AGCGTTTGA TTTTGAATTTGCAGG Pnuc_0564 555235 - 554642 - | two component LuxR family transcriptional regulator TERM 529 554680 - 554695 + g 100 -7.6 -5.55855 | CTTTAATAACAGCCT GTGTTC TATT GAACAC TTTTATTTTTTTGAA TERM 530 555060 - 555082 + g 71 -10.6 -2.62613 | opp_overlap 555058 555056 555060 555065, overlap 555058 TCTGGTATCAATAGA TCCAAGAGGA TGA TCCACTTGGA CTCTTTCCCCTGGAC TERM 531 555082 - 555060 - G 74 -10.6 -3.12895 | opp_overlap 555060 555058, overlap 555058 555056 555065 TCTGGTATCAATAGA TCCAAGAGGA TGA TCCACTTGGA CTCTTTCCCCTGGAC TERM 532 555353 - 555340 - H 74 -3.9 -5.08824 | opp_overlap 555340 GTTCTAGTTAAAAAA TTGAT GGAG ATCAA CTTTCTGGTTTAAAG Pnuc_0565 555476 - 555850 + | hypothetical protein Pnuc_0566 555893 - 556234 + | hypothetical protein Pnuc_0567 556599 - 556249 - | hypothetical protein Pnuc_0568 558014 - 556608 - | hypothetical protein TERM 533 556916 - 556903 - G 78 -5.3 -4.96848 | opp_overlap 556903 TGGCGGATATAAAAA TCAAG CTCG CTTGA TTTTCCATAGCCTAG TERM 534 558066 - 558051 - R 86 -4.7 -5.45802 | opp_overlap 558049 558051 GCGGCAAAAGAAAAA GCCAT TCGGAG ATGGC TGTTGTATTGCTGAT Pnuc_0569 559102 - 558101 - | GCN5-related N-acetyltransferase TERM 535 558279 - 558263 - G 76 -2.2 -5.38326 | overlap 558257 TGAACCAAAGAAAAA CCCCAG TTTCT CTAGAG TCAAATAAGCCGTAG TERM 536 559356 - 559388 + H 79 -9.2 -3.82218 | opp_overlap 559377 GAGTATATGTATGGC TCAGCAAGTGAGTC CTAAT GACTGCCTTGCTGA TTTGCTAATATAGGT Pnuc_0570 559406 - 560302 + | cation diffusion facilitator family transporter Pnuc_0571 561189 - 560317 - | beta-lactamase domain-containing protein Pnuc_0572 561963 - 561331 - | methyltransferase type 11 Pnuc_0573 562389 - 563072 + | multiple antibiotic resistance (MarC)-related protein TERM 537 563818 - 563836 + F 71 -3.8 -4.84274 | GCCAAACCTCAGTTG GTCGATTT GTA AAAGCGGC TTTTTGCTCTAATTA TERM 538 565112 - 565127 + G 78 -5.4 -4.90302 | opp_overlap 565103, overlap 565115 AAAACTCAAGCATCC TCGGAG GTCA CTCTGA TTTCTTTTGTTAATG TERM 539 565115 - 565131 + G 71 -3.7 -4.74215 | overlap 565112 ACTCAAGCATCCTCG GAGGTCA CTC TGATTTC TTTTGTTAATGATCT Pnuc_0575 564209 - 565303 + | choloylglycine hydrolase TERM 540 565349 - 565362 + F 91 -8.1 -5.27938 | opp_overlap 565349 GTCTAGTGCCTTAAA CCACC TTCG GGTGG TTTTTATTTGGGAAT Pnuc_0576 565656 - 566438 + | hypothetical protein TERM 541 566636 - 566617 - T 80 -6.4 -4.7173 | opp_overlap 566617 CATTACATTTAAAAA CCTCATCA GAAA TGATGGGG TTTTTTATTTGGCCA TERM 542 566617 - 566636 + T 100 -8.6 -5.63517 | opp_overlap 566617 CATTACATTTAAAAA CCTCATCA GAAA TGATGGGG TTTTTTATTTGGCCA Pnuc_0578 568294 - 566657 - | amidohydrolase 3 TERM 543 567788 - 567811 + g 72 -3.2 -5.02074 | overlap 567789 CGTGCCGGATTCAAC TTTGGCAT CTGCAGTA ATGCCAAG TTTTTTGAGGCCTGC Pnuc_0579 569150 - 568314 - | hypothetical protein Pnuc_0580 569312 - 569791 + | hypothetical protein Pnuc_0581 570331 - 570029 - | hypothetical protein Pnuc_0582 571000 - 570332 - | hypothetical protein TERM 544 570974 - 570960 - G 86 -4.3 -5.48054 | ACTAAAACTAAAAAA CTCAA GATAA TTGAG CGCAATGGCATGATG TERM 545 571018 - 571039 + H 82 -11.7 -3.08508 | overlap 571015 TTCTCTCAACTGTAT GTGTCTAAC CCTT GTTAGACAC TAATTTTGGAAAATA TERM 546 571576 - 571559 - g 72 -5.6 -4.53777 | overlap 571537 CCCAATGAAAAAGAA CATTGG AATAAG CCAATG AGCAATTAAGGATCA Pnuc_0583 571145 - 571585 + | hypothetical protein Pnuc_0584 571594 - 572166 + | ECF subfamily RNA polymerase sigma-24 factor Pnuc_0585 572144 - 572458 + | hypothetical protein TERM 547 572477 - 572505 + F 82 -6 -5.00616 | gap 1 ACAGCGTTCTCCCTT GCCCC-TGAACTC AAAG GAGTTTTTGGGGC TTTTTTAACAAAAGG TERM 548 572733 - 572749 + F 73 -9.5 -3.14211 | CAGAGATCCCTTCTA TGTCGTT TAA AACGACA TTCCTGAGCCAGGGT TERM 549 573011 - 573023 + F 85 -6.9 -5.06052 | ATTTTCGCCTCATTC GGGGC ATA GTCCC TTTTATATTTTTTAA Pnuc_0586 573052 - 573255 + | cold-shock DNA-binding domain-containing protein TERM 550 573315 - 573299 - f 80 -10.1 -3.72576 | opp_overlap 573299 TTTGCCTGGACCAAA GCCCAGC ATG ACTGGGC TTTTTATATTTATTA TERM 551 573299 - 573315 + F 100 -9.4 -5.28414 | opp_overlap 573299 TTTGCCTGGACCAAA GCCCAG CATGA CTGGGC TTTTTATATTTATTA Pnuc_0587 573341 - 573601 + | translation initiation factor IF-1 TERM 552 573697 - 573710 + F 93 -8.1 -5.37593 | opp_overlap 573692 573697 TAAGAAATACTAAAA CCACC TTCG GGTGG TTTTTTCATTTGAGC TERM 553 573710 - 573697 - f 82 -8.1 -4.55446 | opp_overlap 573697, overlap 573692 TAAGAAATACTAAAA CCACC TTCG GGTGG TTTTTTCATTTGAGC Pnuc_0588 574169 - 574906 + | hypothetical protein Pnuc_0589 574917 - 575669 + | hypothetical protein TERM 554 575686 - 575702 + T 72 -9.3 -3.43217 | opp_overlap 575687, overlap 575678 575687 GGCAATTGTTGACGA AGGCCCG CTT CGGGCCG TTAGTTGCCTTTAGC TERM 555 575701 - 575687 - T 85 -12.8 -3.15579 | opp_overlap 575686 575678 575687 GCAATTGTTGACGAA GGCCCG CTT CGGGCC GTTAGTTGCCTTTAG TERM 556 575687 - 575701 + T 83 -12.8 -2.65448 | opp_overlap 575687, overlap 575686 575678 GCAATTGTTGACGAA GGCCCG CTT CGGGCC GTTAGTTGCCTTTAG TERM 557 575749 - 575733 - T 73 -8 -3.89212 | opp_overlap 575743 TATCCATATATGAAA TGTCGG TTAAC CCGACA GCCGTCGCGTTTAGA TERM 558 575891 - 575870 - T 100 -10.9 -5.3104 | opp_overlap 575870 CCACCAAAAAGAAAA GGGACCACA TTTC TGTGATCCC TTTGTATAACTGGTG TERM 559 575870 - 575891 + T 79 -8.7 -4.07124 | opp_overlap 575870 CCACCAAAAAGAAAA GGGACCACA TTTC TGTGATCCC TTTGTATAACTGGTG Pnuc_0590 576139 - 575942 - | hypothetical protein Pnuc_0591 576660 - 576142 - | hypothetical protein TERM 560 576567 - 576583 + g 74 -5.9 -4.57073 | AACGAAATGTATGAG CTTCTTG CGG TAAGAAG TTTTTGGCAAAAGTA TERM 561 576908 - 576872 - R 71 -9.8 -2.79915 | gap 1, opp_overlap 576902, overlap 576899 576902 ACCTATTTTAGTAGA TTTAGGGCTGATTTTCT AGTC AAAAAAT-AGCCCTAAA ACAGGGTTTAAAGAG TERM 562 576926 - 576899 - R 70 -2.8 -5.08824 | gap 1, opp_overlap 576902, overlap 576872 576902 TTTCTAGTCAAAAAA TAGC-CCTAAAAC AGG GTTTAAAGAGCTA TTTAGAAGGATGATG TERM 563 576956 - 576973 + r 70 -8.3 -3.40163 | opp_overlap 576956 GCAGTCAATAAAAAA GCCCCGC AGAA GCGAGGC TTAGTATTGCTGGTG TERM 564 576973 - 576956 - R 100 -10.5 -5.4833 | opp_overlap 576956 GCAGTCAATAAAAAA GCCCCGC AGAA GCGAGGC TTAGTATTGCTGGTG Pnuc_0592 578011 - 577031 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 565 578054 - 578032 - R 100 -13.6 -5.45652 | ATTCCTAATAAAAAA GTGCAAAACA AAA TGTTTTGCAC TAGATAAAACCACCT Pnuc_0593 579035 - 578094 - | 2-keto-3-deoxygluconate permease Pnuc_0594 579331 - 580230 + | 2-hydroxy-3-oxopropionate reductase TERM 566 580266 - 580295 + T 76 -10.9 -2.72511 | opp_overlap 580271, overlap 580271 AAGTGCATAACGTTA AAAAACCTCATCA GAAA TGATGAGGTTTTA ATTTGACCAAATAGG TERM 567 580271 - 580290 + T 91 -10.8 -4.54727 | opp_overlap 580271, overlap 580266 CATAACGTTAAAAAA CCTCATCA GAAA TGATGAGG TTTTAATTTGACCAA TERM 568 580290 - 580271 - T 93 -10.8 -5.11033 | opp_overlap 580266 580271 CATAACGTTAAAAAA CCTCATCA GAAA TGATGAGG TTTTAATTTGACCAA TERM 569 580437 - 580416 - T 100 -10.9 -5.24647 | ACAGACAAAAGAAAA GGGACCACA TTTC TGTGATCCC TCGATATAACTGGTG Pnuc_0595 581956 - 580610 - | N-acetylmuramoyl-L-alanine amidase Pnuc_0596 582490 - 581960 - | hypothetical protein TERM 570 582423 - 582433 + g 72 -8.2 -3.68073 | AATTTGGCTAGGGCG GCGG TAT CCGC TTCTTGCCTACAATG Pnuc_0597 582533 - 583627 + | putative iron-sulfur cluster binding protein TERM 571 583726 - 583737 + G 78 -5.8 -4.91109 | CGCTCTCGAGGAATC CGCT GCCG AGCG TTTTTCTAGTCGAAA Pnuc_0598 583670 - 584455 + | AzlC family protein TERM 572 584506 - 584529 + G 73 -9.6 -3.30007 | overlap 584510 TTATGGATTGCTCTG GTGGGTGCCT GCCT AGGCACTTAC TTCTGCCGCGCTATT TERM 573 584510 - 584525 + G 70 -9 -3.44146 | overlap 584506 GGATTGCTCTGGTGG GTGCCT GCCT AGGCAC TTACTTCTGCCGCGC Pnuc_0599 584455 - 584805 + | hypothetical protein Pnuc_0600 587924 - 584847 - | FAD linked oxidase domain-containing protein TERM 574 586524 - 586500 - G 77 -11.4 -3.18912 | opp_overlap 586498 GTATTTACGTACTAA GGCTGACGCT TCTTC AGCGACAGCC CGCATTTTTTGGGCG TERM 575 587104 - 587081 - G 70 -9 -3.40382 | gap 1 TAGCAAAGTTCACAA TACC-CAACAC CTT GTGTTGCGGTA ACGGTGCTAGTTTGA TERM 576 587737 - 587783 + g 77 -11 -3.18264 | opp_overlap 587743 587744 587766, overlap 587743 ATTTGAATGGCATTA GCAATATCTTGTGCAGTTTTTG GCA CAAAGACTGCAACAGGCATTGC TTGATAAATAGAAGC Pnuc_0601 588604 - 587921 - | GntR family transcriptional regulator Pnuc_0602 588807 - 589991 + | Serine--glyoxylate transaminase Pnuc_0603 590124 - 590531 + | hypothetical protein TERM 577 590691 - 590661 - g 73 -4.1 -4.87318 | gap 2, overlap 590662 CCGAAAATTCAAAAA GCGGT-TGCTG-AAC AGG GTTACAGCATACCGA CTCCGATTCAAGCGC TERM 578 591913 - 591897 - g 88 -5.7 -5.48063 | ACTGAAGAGAAAAAA GCCGGCA TCA CGCCTGC TAAGCCAGCAGTCGG Pnuc_0604 590538 - 591959 + | DEAD/DEAH box helicase domain-containing protein Pnuc_0605 592920 - 591970 - | glutamate--tRNA ligase TERM 579 595118 - 595104 - g 72 -2.8 -5.07486 | GATGGGTAAGAAAAA GCCA GAAGAAA TGGC GCAGCATCGCAAGAT Pnuc_0606 592924 - 596538 + | DNA polymerase III, alpha subunit Pnuc_0607 597720 - 596560 - | glycosyl transferase family protein TERM 580 597236 - 597226 - G 76 -4 -5.03314 | opp_overlap 597212 CGGATTTTTAAAAAA TACT TCT AGTA AGCGTAATTTTTCAG Pnuc_0608 598511 - 597723 - | glycosyl transferase family protein Pnuc_0609 599269 - 598508 - | glycosyl transferase family protein Pnuc_0610 599280 - 601043 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Pnuc_0611 602531 - 601068 - | ribonuclease TERM 581 601192 - 601164 - G 80 -6.9 -4.66609 | CAGCTGAGCTAAAAA TTGATTTTCTTCT TCT AGAAAAAGATCAA TCACATCAGGCGCAG TERM 582 602004 - 602042 + g 88 -8.1 -4.87626 | gap 1, overlap 602000 CTGAAGCTCAGTGTC GGAGGCATC-TTGAGCGC TAGT GCGCACAATGATTCCGCC TTTTTCATCTTCCGC Pnuc_0612 603154 - 602528 - | maf protein Pnuc_0613 603590 - 603147 - | hypothetical protein Pnuc_0614 604010 - 603621 - | iojap-like protein Pnuc_0615 604747 - 604058 - | nicotinate (nicotinamide) nucleotide adenylyltransferase Pnuc_0616 605676 - 604744 - | coproporphyrinogen III oxidase TERM 583 604949 - 604959 + g 82 -5.4 -5.2291 | overlap 604953 CGCCCACGACGGTAT TCCT GAA AGGA TTTTTCTTCTGGTGT Pnuc_0617 606969 - 605692 - | phosphoribosylamine--glycine ligase TERM 584 606657 - 606647 - G 74 -5.4 -4.57341 | AATGCTTTTGAAAAA TCCT TAG AGGA TTCCAATTGAGCGGC Pnuc_0618 607718 - 606999 - | hypothetical protein TERM 585 608277 - 608262 - g 83 -2.5 -5.67283 | overlap 608263 AATTCAAAGAAAAAA CTGGC TTATCT GCCAA TGATTGCCTTAGCTT Pnuc_0619 608060 - 608872 + | hypothetical protein Pnuc_0620 609844 - 608903 - | transcriptional regulator CysB-like protein Pnuc_0621 611062 - 609908 - | permease YjgP/YjgQ family protein TERM 586 610191 - 610205 + g 71 -3.6 -4.79352 | GCAATTGAATGGCGC TGAACA TCT TGTTTA TTTTCTTGTAGATGA Pnuc_0622 612174 - 611059 - | permease YjgP/YjgQ family protein TERM 587 612417 - 612435 + G 76 -7.4 -4.21465 | opp_overlap 612415 612417 CAAGCCTAAAAAGTA TCCTTGCT TAC AGCACGGA TTGTTTAGTTTTGGC Pnuc_0623 612335 - 613945 + | leucyl aminopeptidase Pnuc_0624 613949 - 614416 + | DNA polymerase III chi subunit, HolC Pnuc_0625 614445 - 615230 + | prolipoprotein diacylglyceryl transferase TERM 588 615520 - 615499 - g 76 -4.3 -5.03314 | overlap 615501 GCGAGTTTTAAAAAA GACCCGAGC AAAA GCTGGGGTA GAGAGCGGGCAGATA TERM 589 615518 - 615501 - g 71 -6.9 -4.14633 | overlap 615499 GAGTTTTAAAAAAGA CCCGAGC AAAA GCTGGGG TAGAGAGCGGGCAGA Pnuc_0626 615242 - 616150 + | LysR family transcriptional regulator Pnuc_0627 616283 - 617587 + | malonyl-CoA decarboxylase TERM 590 617672 - 617658 - f 70 -5.6 -4.386 | GAATGGGGCATAAAA GAAGCC GGT GGCTAC AAAGCCGGTAGTGTC Pnuc_0628 617727 - 618761 + | TRAP dicarboxylate transporter- DctP subunit TERM 591 618911 - 618937 + G 71 -10.2 -2.73483 | opp_overlap 618909, overlap 618912 ATGCGGCAAATGACT GGCAGGATGAAG CTG CTTTGTTCTGCC TGGTTGGGGTCACCT Pnuc_0629 618793 - 619281 + | tripartite ATP-independent periplasmic transporter DctQ Pnuc_0630 619283 - 620635 + | TRAP dicarboxylate transporter, DctM subunit TERM 592 620730 - 620708 - g 89 -4.8 -5.63645 | overlap 620709 CCAAAAGATAAAAAA GCATGCGCCT TAG AAACGCATGA TGGTCTTTATTACTC TERM 593 620729 - 620709 - g 74 -8.3 -3.95747 | overlap 620708 CAAAAGATAAAAAAG CATGCGCCT TAG AAACGCATG ATGGTCTTTATTACT TERM 594 621413 - 621441 + G 72 -9 -3.65529 | gap 1 ATGGGTGTGCCTACT TTCTATGTTCGCC TATT GGCGGACA-AGAA TTTCAATAAGAATGT Pnuc_0631 620660 - 622183 + | malonyl-CoA synthase TERM 595 622234 - 622196 - T 79 -8.9 -3.9373 | TAGTTAAAACCCAAA TGCCTTGCGGCTTTCAT TAAGC ATGAAGGCTGCAAGGAA TAGCAACATCACGCC Pnuc_0632 623002 - 622184 - | hypothetical protein TERM 596 622589 - 622574 - G 74 -8.2 -3.84451 | opp_overlap 622587, overlap 622585 CGTTCCAAAGCCAAA CAGGCC TAAA GGCCCG GGCAATTCTCTGCCA TERM 597 622602 - 622612 + g 82 -3.2 -5.4833 | opp_overlap 622585, overlap 622587 CCGGGCAATTCTCTG CCAG GCT TTGG TTTTTTGTTCAATAG Pnuc_0633 623542 - 623183 - | hypothetical protein Pnuc_0634 623804 - 623517 - | hypothetical protein TERM 598 623921 - 623896 - R 76 -7.6 -4.13945 | opp_overlap 623917, overlap 623897 ATTTTGATCTTAAAA GGAAGGGTTG GGCTGG CAACCCTTCA GATCGGTCAGAAGTT TERM 599 623920 - 623897 - R 78 -11.1 -3.08046 | opp_overlap 623917, overlap 623896 TTTTGATCTTAAAAG GAAGGGTTG GGCTGG CAACCCTTC AGATCGGTCAGAAGT Pnuc_0635 626048 - 623928 - | TonB-dependent receptor, plug TERM 600 625364 - 625338 - G 70 -5.1 -4.38322 | opp_overlap 625337, overlap 625340 GTAACCATAAAAGAA GTCGGTATAGA TTTTG TCTATCCCGCC AAATTTTTGGGTGAT TERM 601 626673 - 626624 - g 74 -3.8 -5.0538 | gap 2, opp_overlap 626631, overlap 626631 TCGGACCTCAAAAAA TCAGAAATACTGCTTCATCAAGGT GATC ACCA-GATGGAGCAGTATTT-TGT CCTTGATGGAATTCT TERM 602 626631 - 626667 + G 93 -9.6 -4.56607 | gap 1, opp_overlap 626624 626631 TCAAAAAATCAGAAA TACTGCTTCATCAAGGT GATC ACCA-GATGGAGCAGTA TTTTGTCCTTGATGG TERM 603 626667 - 626631 - g 76 -7.4 -4.3179 | gap 1, opp_overlap 626631, overlap 626624 TCAAAAAATCAGAAA TACTGCTTCATCAAGGT GATC ACCA-GATGGAGCAGTA TTTTGTCCTTGATGG Pnuc_0636 626489 - 627106 + | cyclic nucleotide-binding protein Pnuc_0637 627311 - 629020 + | putative oxalyl-CoA decarboxylase TERM 604 629138 - 629160 + G 71 -10.6 -2.66106 | opp_overlap 629137 629144, overlap 629143 ATTGACTTCACACAC GTACAAGCAG GTC CTGCATGTAC TCAGTTGTTAGCATG TERM 605 629700 - 629678 - g 78 -6.3 -4.70879 | overlap 629681 GGTAAAGGTCAAAAA GTATCTTGC TCAAT GCAAGATGC GGTATTGAACTTGTG Pnuc_0638 629093 - 630343 + | formyl-coenzyme A transferase TERM 606 630372 - 630390 + F 100 -11.7 -5.27779 | opp_overlap 630367 ATGTACTAACTTGAA GGCGCTC CTTGT GAGCGCC TTTTTTCATCTTGAA Pnuc_0639 630445 - 630873 + | putative PAS/PAC sensor protein TERM 607 630908 - 630928 + F 100 -14.1 -3.38683 | opp_overlap 630905 GCCTTGAACCCATTT TGTGCCCAA AAA TTGGGCACA TTCGATTTTGCGTAT Pnuc_0640 631001 - 632248 + | formyl-coenzyme A transferase TERM 608 632292 - 632302 + G 72 -3.2 -5.08824 | GATTTTGGTAAGGCT GCTT TAG AGGC TTTTTTAGATCGCGG Pnuc_0641 632250 - 633182 + | methionyl-tRNA formyltransferase TERM 609 633349 - 633364 + T 71 -6.8 -4.13271 | opp_overlap 633349 TTTGGGATTAAAAAA GCGTCT CTTA AGGCGC TTTAATTATTGTGTA TERM 610 633364 - 633349 - T 76 -4.6 -5.14563 | opp_overlap 633349 TTTGGGATTAAAAAA GCGTCT CTTA AGGCGC TTTAATTATTGTGTA Pnuc_0642 633645 - 633370 - | hypothetical protein TERM 611 634171 - 634154 - g 71 -7.7 -3.96483 | ACTGGAGCCAAACAA CCCCTCA TTGA TGAAGGG GCTAATGATCAAGGT Pnuc_0643 633860 - 635002 + | choloylglycine hydrolase TERM 612 635049 - 635024 - T 88 -9.1 -4.63527 | opp_overlap 635030, overlap 635030 GCAGCAGCTTAAAAA GAAAAACCACC TTCG GGTGGTTTTTT GTTATTTACTTTAGG TERM 613 635030 - 635043 + T 100 -8.1 -5.72254 | opp_overlap 635030 635024 GCTTAAAAAGAAAAA CCACC TTCG GGTGG TTTTTTGTTATTTAC TERM 614 635043 - 635030 - T 100 -8.1 -5.61881 | opp_overlap 635030, overlap 635024 GCTTAAAAAGAAAAA CCACC TTCG GGTGG TTTTTTGTTATTTAC panC 635959 - 635108 - | pantoate--beta-alanine ligase Pnuc_0645 636819 - 635956 - | chromosome segregation and condensation protein ScpA Pnuc_0646 637000 - 636812 - | hypothetical protein Pnuc_0647 638775 - 637105 - | methionyl-tRNA synthetase Pnuc_0648 638919 - 639749 + | formate dehydrogenase, subunit FdhD dcd 639802 - 640368 + | deoxycytidine triphosphate deaminase TERM 615 640454 - 640479 + G 78 -5.5 -4.89339 | gap 1, opp_overlap 640477, overlap 640437 640456 GCGACCCTCACTCGC TC-TTCTTTGGC CAG GCCGGAGAATGA TTTTTATCACTGGTT Pnuc_0650 640382 - 641296 + | K+ channel inward rectifier domain-containing protein TERM 616 642672 - 642693 + G 70 -9.5 -3.09834 | opp_overlap 642672 CACTTTGGTGGAAGA GTCTATTGC GGAG GCAATGGAC TTCCGTCGTGCCATG Pnuc_0651 641293 - 643560 + | lysine decarboxylase Pnuc_0652 643577 - 643939 + | aspartate alpha-decarboxylase Pnuc_0653 645485 - 643953 - | TRAP dicarboxylate transporter, DctM subunit TERM 617 645045 - 645035 - G 76 -8.2 -4.12198 | opp_overlap 645042 CAGAAGCCGCTAAAA CGCC TGT GGCG TAGCGCATGTTGTAG Pnuc_0654 646033 - 645482 - | tripartite ATP-independent periplasmic transporter DctQ Pnuc_0655 647457 - 646039 - | argininosuccinate lyase TERM 618 646931 - 646916 - G 72 -9 -3.63341 | AACATTTCGTAATAA GCCATC AAAT GATGGC CGAAAGTAATGGGTT Pnuc_0656 647501 - 648478 + | porphobilinogen deaminase Pnuc_0657 648502 - 649326 + | uroporphyrinogen III synthase HEM4 Pnuc_0658 649894 - 649319 - | chorismate lyase TERM 619 649712 - 649695 - G 90 -9.9 -4.55128 | opp_overlap 649695 ATCCTGAAATGAAAA TAGCGAC TTTC GTCGCTA TTTAATGTTTGAGGG TERM 620 649695 - 649712 + g 80 -9.9 -4.00532 | opp_overlap 649695 ATCCTGAAATGAAAA TAGCGAC TTTC GTCGCTA TTTAATGTTTGAGGG Pnuc_0659 651399 - 649897 - | DEAD/DEAH box helicase domain-containing protein TERM 621 651204 - 651184 - G 100 -8.9 -5.16151 | opp_overlap 651183 CAAAGGCAATAAAAA GGCTGCGGT TTT ACCGCTACC GGTTTGGCTGCTGAC TERM 622 651357 - 651374 + g 78 -6.3 -4.72863 | overlap 651359 CAGTTCCAGTGCTCT TTGAGTC TTTC GACTCGA TTTTAGTTTCTTTAG Pnuc_0660 651642 - 652322 + | lysine exporter protein LysE/YggA Pnuc_0661 653738 - 652341 - | aldehyde dehydrogenase TERM 623 653122 - 653150 + g 74 -3.7 -5.03314 | TCCAAAGTAATAGGA GTCAGGTTCTCAG CTG CTGCGCGCATGAC TTTTTTACCAATGGC TERM 624 653661 - 653679 + g 71 -7.4 -3.91911 | TCCAATGCGCTCAAG CCTCACTT CTA AGGTGGGG TTTGGTTCGGCTGCG Pnuc_0662 653788 - 654360 + | peptide methionine sulfoxide reductase TERM 625 654336 - 654356 + T 70 -8.3 -3.31625 | opp_overlap 654335 GGCCAAATTTAAATC GCTTATTGC CCC GCAATACGC TTAGTACTTCGTTTG Pnuc_0663 655008 - 654373 - | pyridoxamine 5'-phosphate oxidase Pnuc_0664 655031 - 655810 + | UBA/THIF-type NAD/FAD binding protein TERM 626 655894 - 655910 + F 73 -2.3 -5.26119 | TTCTTCACAATGCAC GTCTT GATTTAA AAGAC TTTTCTTTTTAGAGC TERM 627 656252 - 656270 + G 79 -9.6 -3.76402 | opp_overlap 656243 TGAAATGGCTGTGCA TGAGCCTG TAG CAGGTTCA TTTGCTGCCTACGCT TERM 628 656751 - 656740 - g 83 -4.4 -5.3236 | opp_overlap 656746 AGAATCCAGAAAAAA CCAT TCCG ATGG CAATCGATTCTCTCG Pnuc_0665 656046 - 657425 + | amino acid permease-associated region TERM 629 657906 - 657892 - g 70 -2.1 -5.03314 | CTCATCTTGAAAAAA CCAAT GGTGG ACTGG GTGTCTTAATGGCTG Pnuc_0666 657438 - 658556 + | alanine dehydrogenase Pnuc_0667 658657 - 659232 + | hypothetical protein TERM 630 659629 - 659643 + G 78 -5 -5.02476 | TTAATGGGTTTGTAT GTTTCT AAT GGAAAC TTTTTTACGCAATGT TERM 631 660636 - 660624 - g 71 -3.4 -4.75174 | TACTCAATTTAAAAA TTGG TATAG CCAA GCTGGCACCCCGCGT Pnuc_0668 659278 - 661887 + | aminopeptidase N TERM 632 662103 - 662115 + G 74 -10.5 -3.27617 | opp_overlap 662078 662102 662101 CTTGAGTCATGAAGT GGCGC AAG GCGCC TTAATCGGTTTATTA TERM 633 662330 - 662356 + G 79 -3.1 -5.39721 | gap 1, overlap 662333 ATGGTTCATCTAATA TTGATGTCAATG TTTC CATTGGCA-CGA TTTTTTCTATCCTAA Pnuc_0669 661969 - 662976 + | inositol phosphatase/fructose-1,6-bisphosphatase TERM 634 663016 - 662985 - T 95 -14 -3.56643 | gap 1, opp_overlap 662992, overlap 662992 GGCATAGTCTTCAAA GCAAAAACCCCAATC ACT GATTGGGGTTTTT-C TTTAACGGGAAGTAT TERM 635 662992 - 663010 + T 100 -13.2 -5.27335 | opp_overlap 662985 662992 TCTTCAAAGCAAAAA CCCCAATC ACT GATTGGGG TTTTTCTTTAACGGG TERM 636 663010 - 662992 - T 100 -13.2 -4.98531 | opp_overlap 662992, overlap 662985 TCTTCAAAGCAAAAA CCCCAATC ACT GATTGGGG TTTTTCTTTAACGGG Pnuc_0670 665635 - 663065 - | cyanophycin synthetase Pnuc_0671 667828 - 665636 - | cyanophycin synthetase Pnuc_0672 668030 - 670363 + | ABC transporter related Pnuc_0673 670360 - 670833 + | hypothetical protein TERM 637 671446 - 671480 + F 85 -12.4 -3.22476 | opp_overlap 671453, overlap 671453 AAAAAAGTAGTTATC TAGAAAAGCCACCT TCTTTTT AGGTGGCTTTTTTA TTCATCATGACTGAT TERM 638 671453 - 671473 + F 95 -8.3 -5.52023 | opp_overlap 671453, overlap 671446 TAGTTATCTAGAAAA GCCACCT TCTTTTT AGGTGGC TTTTTTATTCATCAT TERM 639 671473 - 671453 - f 85 -8.3 -4.431 | opp_overlap 671453 671446 TAGTTATCTAGAAAA GCCACCT TCTTTTT AGGTGGC TTTTTTATTCATCAT TERM 640 671588 - 671565 - f 86 -9.8 -4.06055 | opp_overlap 671568 AGTGCGCAAATGAAA TTATCTTGAT GATC ATCAAGATAA TTAAAGGGTTGATGT Pnuc_0674 671673 - 672926 + | major facilitator transporter TERM 641 672951 - 672966 + F 93 -6.8 -5.4833 | opp_overlap 672951 GTCATTCTGACAAAA GGGGTC TTCG GACTCC TTTTTTATTGCCTGC TERM 642 673329 - 673339 + G 72 -5.4 -4.55287 | AACATCTTTTGCGTT GCTT CCA AAGC TTTTCTATCAATCAC Pnuc_0675 673096 - 673413 + | hypothetical protein Pnuc_0676 673488 - 675686 + | TonB-dependent receptor TERM 643 675857 - 675867 + G 87 -6.8 -5.1101 | CTGGATTGTGCTAAT GGTG CTA CACC TTTTTTAACTACTGA TERM 644 676835 - 676876 + G 77 -3.4 -5.10767 | gap 2, opp_overlap 676846, overlap 676838 676839 AGCCAGACAAATGGC TATTCAGATCATCCTTTATT AATT AATAAAGG-TGATTTG-GTA TTTTTATCTTGGCTG TERM 645 676838 - 676874 + G 73 -7.6 -4.17211 | gap 1, opp_overlap 676846, overlap 676835 676839 CAGACAAATGGCTAT TCAGATCATCCTTTATT AATT AATAAAGG-TGATTTGG TATTTTTATCTTGGC Pnuc_0677 675686 - 676939 + | BNR repeat-containing glycosyl hydrolase Pnuc_0678 676936 - 677412 + | redoxin domain-containing protein Pnuc_0679 677444 - 677896 + | hypothetical protein TERM 646 677906 - 677937 + T 100 -11.7 -4.71426 | opp_overlap 677911, overlap 677911 AAGTAAAGGGTAATA AAAAAGCCCCTAG TATTAC CTAGGGGCTTTTG TTTTGTTAATGCGCC TERM 647 677911 - 677932 + T 100 -11.6 -5.28831 | opp_overlap 677911, overlap 677906 AAGGGTAATAAAAAA GCCCCTAG TATTAC CTAGGGGC TTTTGTTTTGTTAAT TERM 648 677932 - 677911 - T 100 -11.6 -5.4756 | opp_overlap 677911 677906 AAGGGTAATAAAAAA GCCCCTAG TATTAC CTAGGGGC TTTTGTTTTGTTAAT Pnuc_0680 679649 - 677955 - | dihydroxy-acid dehydratase TERM 649 680159 - 680197 + G 74 -10.4 -3.1855 | CATCAAATCGTTCGA GGGCTTAAAAAAGGAGCC TTA GACTTTTTATTTAAGCCC TTCAATCTTGAAGAA Pnuc_0681 679946 - 680509 + | response regulator receiver protein TERM 650 680734 - 680724 - g 72 -5.4 -4.43755 | AGAACAAATTGAAAA TGGT GAG ACCA GCTCTTTTTACGGCA TERM 651 681220 - 681190 - g 70 -9.1 -3.45768 | gap 2, overlap 681183 681177 GAGCAGAAGTCAGAA GCTCTGGCGC--CTG CAG CAGTAGCGCCAGAAC CAGTTGCATCTGCGC Pnuc_0682 680590 - 681594 + | hypothetical protein Pnuc_0683 681963 - 681625 - | nitrogen regulatory protein P-II Pnuc_0684 683653 - 682034 - | NAD+ synthetase TERM 652 682087 - 682124 + g 70 -9.1 -3.47494 | gap 1, opp_overlap 682083 682082 CTCGGCCAAAGGCGC GAGTCGTCACGCGTACTC CTG GAG-GCGCTTGGCGACGC TTGTACTCATTAAGT TERM 653 682879 - 682897 + g 91 -6.7 -5.50499 | GTGCCTCAACGCTTT GGGGTAG AGCAA TTACCCC TTTTTTTAGCTGTCC Pnuc_0685 684227 - 683691 - | inorganic diphosphatase TERM 654 684452 - 684464 + G 79 -7.7 -4.46212 | CTTGCGGTGTCCTGG CCGTA GTT TACGG TTTTGTGATGCGCAG TERM 655 684812 - 684834 + G 74 -7 -4.2338 | overlap 684809 684814 TGCTCGTAGTGGGTT TAGGCTTACT TGG AGTAGGCCTC TTCTTTATGTTCCTG TERM 656 684814 - 684832 + G 79 -9.6 -3.70022 | overlap 684812 684809 CTCGTAGTGGGTTTA GGCTTACT TGG AGTAGGCC TCTTCTTTATGTTCC hppA 684400 - 686460 + | membrane-bound proton-translocating pyrophosphatase TERM 657 686505 - 686535 + F 100 -17 -2.8789 | opp_overlap 686505 686511, overlap 686511 TAAGACGGCAGTAAA GAAAAACGCCTAGC AAT GCTAGGCGTTTTGC ATTGTTATCGCCATT TERM 658 686535 - 686505 - f 100 -17 -3.76379 | opp_overlap 686505 686511, overlap 686511 TAAGACGGCAGTAAA GAAAAACGCCTAGC AAT GCTAGGCGTTTTGC ATTGTTATCGCCATT TERM 659 686529 - 686511 - f 100 -14.6 -5.33405 | opp_overlap 686511 686505, overlap 686505 GGCAGTAAAGAAAAA CGCCTAGC AAT GCTAGGCG TTTTGCATTGTTATC TERM 660 686511 - 686529 + F 100 -14.6 -4.37734 | opp_overlap 686505 686511, overlap 686505 GGCAGTAAAGAAAAA CGCCTAGC AAT GCTAGGCG TTTTGCATTGTTATC Pnuc_0687 686848 - 687081 + | hypothetical protein Pnuc_0688 687081 - 687479 + | PilT domain-containing protein TERM 661 687519 - 687501 - T 100 -14.6 -5.45802 | opp_overlap 687501 CCGCTAAAACAAAAA CGCCTAGC ATT GCTAGGCG TTTTTTATTGCAAGT TERM 662 687501 - 687519 + T 100 -14.6 -5.45652 | opp_overlap 687501 CCGCTAAAACAAAAA CGCCTAGC ATT GCTAGGCG TTTTTTATTGCAAGT Pnuc_0689 688503 - 687547 - | thioredoxin reductase TERM 663 688656 - 688673 + G 89 -9.1 -4.60648 | GCGCTGGTTTATCTC CCTAGGC CTTT GCCTGGG TTTATTTGCTGTTTT TERM 664 690156 - 690142 - g 100 -10 -5.24416 | opp_overlap 690140 GAAGCAGAAGAAAAA GGTGAG AAG CTCACC AATCCATTTAGCTTA TERM 665 690446 - 690457 + G 74 -7.2 -4.24204 | TTTTGGATCAGCAGG GCGC TGAA GCGC TTTTGGGTATGGGTG Pnuc_0690 688543 - 690855 + | cell division FtsK/SpoIIIE TERM 666 691165 - 691143 - g 82 -7 -4.75472 | opp_overlap 691143 691141 GCCATACGAACAAAA GTTGATTACC AAT GGCACTCAAC TCATTTTGTGGGACA Pnuc_0691 690865 - 691548 + | outer membrane lipoprotein carrier protein LolA Pnuc_0692 691595 - 692905 + | seryl-tRNA synthetase TERM 667 692891 - 692921 + T 80 -6.2 -4.8048 | GGTGGCTTAGAGACG TTAAAGCCGAATTA AAT TAGAACGGCTTTAA TTTTTACTCTAGCAA Pnuc_0693 693324 - 692902 - | PilT domain-containing protein Pnuc_0694 693569 - 693324 - | transcriptional regulator/antitoxin, MazE TERM 668 693574 - 693626 + H 75 -10.4 -3.26444 | gap 1, opp_overlap 693588 693619, overlap 693576 693577 693588 693619 TGAATATTCATGCTC TA-ACCTCTTTAAAATAGATATACA TATA TGTATATCTATTTTAAAGAGACGTA TCTCTTATTACCAGC TERM 669 693576 - 693623 + H 95 -14.6 -2.51223 | opp_overlap 693588 693619, overlap 693574 693577 693588 693619 AATATTCATGCTCTA ACCTCTTTAAAATAGATATACA TATA TGTATATCTATTTTAAAGAGAC GTATCTCTTATTACC TERM 670 693577 - 693624 + H 83 -11.9 -3.19509 | gap 2, opp_overlap 693588 693619, overlap 693576 693574 693588 693619 ATATTCATGCTCTAA C--CTCTTTAAAATAGATATACA TATA TGTATATCTATTTTAAAGAGACG TATCTCTTATTACCA TERM 671 693588 - 693611 + H 86 -9.8 -4.07885 | opp_overlap 693588, overlap 693576 693577 693574 CTAACCTCTTTAAAA TAGATATACA TATA TGTATATCTA TTTTAAAGAGACGTA TERM 672 693611 - 693588 - H 86 -9.8 -4.09739 | opp_overlap 693588 693576 693577 693574 CTAACCTCTTTAAAA TAGATATACA TATA TGTATATCTA TTTTAAAGAGACGTA TERM 673 693838 - 693856 + H 100 -9.5 -5.38958 | opp_overlap 693838 GAGATTATTGAATGA GCCCCGC ATGAC GTGGGGC TTTTTATTTATACGT TERM 674 694731 - 694747 + G 72 -5.1 -4.56597 | opp_overlap 694724 694725, overlap 694745 GCCAGGAAGTGCGTA GCGCT AATCAAA AGCGC TTTTTACGAGAAGAA TERM 675 694901 - 694919 + G 71 -7.4 -3.98083 | GGCCGTGATGGTTTG CCAGCCAA TGC TTGGATGG TTTATGGATTGGGTG Pnuc_0695 693917 - 695755 + | ATP-dependent DNA helicase RecQ TERM 676 697049 - 697019 - g 82 -12 -3.34043 | overlap 697044 697045 TGGAGTAGTTCAGAA CATCCAGTTAGCCA AAA TGACTAAATGGATG ACTCCAGCCCAAGCC Pnuc_0696 695949 - 697283 + | amidohydrolase TERM 677 697326 - 697313 - f 70 -8.1 -3.63569 | opp_overlap 697313 TTAAGCTCTTAAGAA CCAGC TTCG GCTGG TTTTTTGTTGCTCTT TERM 678 697313 - 697326 + F 100 -8.1 -5.54885 | opp_overlap 697313 TTAAGCTCTTAAGAA CCAGC TTCG GCTGG TTTTTTGTTGCTCTT Pnuc_0697 697496 - 698500 + | choloylglycine hydrolase TERM 679 698545 - 698532 - f 77 -8.1 -4.23892 | opp_overlap 698532 GTGAATCATTGAAAA CCACC TGCG GGTGG TTTTTTCCATATACT TERM 680 698532 - 698545 + F 88 -8.1 -5.13473 | opp_overlap 698532 GTGAATCATTGAAAA CCACC TGCG GGTGG TTTTTTCCATATACT Pnuc_0698 698571 - 699077 + | hypothetical protein Pnuc_0699 699722 - 699066 - | exonuclease, RNase T and DNA polymerase III TERM 681 701143 - 701126 - g 72 -5.6 -4.40358 | ACGCAGCTCACAAAA GAAGAG GCGCAA CTCTTC TATCAAATTACGATT Pnuc_0700 700148 - 701809 + | DNA polymerase III, subunits gamma and tau TERM 682 701787 - 701804 + F 73 -8.4 -3.74347 | GCGCCAAAGTAGTCG GCGGCT CAGTAA AGCCGC TTTAAACTTTGTGCG Pnuc_0701 701874 - 702197 + | hypothetical protein Pnuc_0702 702197 - 702811 + | recombination protein RecR TERM 683 702869 - 702857 - f 73 -10.5 -2.85999 | opp_overlap 702853 702853 TCAGGGCACATGAGA GCGGC CTA GCCGC AGCCCTCTGTCATTC TERM 684 703442 - 703422 - g 70 -9.7 -3.06831 | overlap 703411 CCAATGGCGAGGCAA CTCGCGCAC AAG GTGCACAAG CCCATTTTTATTCTG Pnuc_0703 703034 - 704449 + | carbohydrate-selective porin OprB TERM 685 704488 - 704471 - f 70 -5.5 -4.40358 | opp_overlap 704473, overlap 704473 ACTCATTCCACAAAA GACCACC TGTG GGTGGTT TTTTATTGCCTAAAT TERM 686 704486 - 704473 - f 73 -8.1 -3.80877 | opp_overlap 704473, overlap 704471 TCATTCCACAAAAGA CCACC TGTG GGTGG TTTTTTATTGCCTAA TERM 687 704473 - 704486 + F 93 -8.1 -5.4833 | opp_overlap 704473 704471 TCATTCCACAAAAGA CCACC TGTG GGTGG TTTTTTATTGCCTAA TERM 688 704559 - 704582 + F 73 -9.8 -3.20382 | opp_overlap 704561 704563 TTTGCGGTTTTTACA TATACTGTAT AAAC ATACAGTATA TTAATGACTATGACA Pnuc_0704 704586 - 705077 + | putative prophage repressor TERM 689 705616 - 705598 - gf 83 -8.8 -4.2123 | opp_overlap 705598 CACTTAGCCAAGAAA CACCAGCA GTT CGCTGGCG TGTGTGATGTCAATG Pnuc_0705 705052 - 706404 + | DNA-directed DNA polymerase TERM 690 706533 - 706523 - f 85 -5.4 -5.1861 | CGCAGTATTAAAAAA TACG AAG CGTA GCGAGAGCGAAAGCA TERM 691 706615 - 706658 + F 83 -7.6 -4.75174 | gap 1, opp_overlap 706629 706630, overlap 706617 706621 AATTCAGCAGTAGGC CAGAGGGGGAATAAGGAAATC ACG GAT-TCCTTATTCCCTTGCTC TTTTTGACTTCAGTA TERM 692 706617 - 706656 + F 86 -10.2 -3.98859 | gap 1, opp_overlap 706629 706630, overlap 706615 706621 TTCAGCAGTAGGCCA GAGGGGGAATAAGGAAATC ACG GAT-TCCTTATTCCCTTGC TCTTTTTGACTTCAG TERM 693 706621 - 706652 + F 95 -14 -3.61527 | gap 1, opp_overlap 706629 706630, overlap 706617 706615 GCAGTAGGCCAGAGG GGGAATAAGGAAATC ACG GAT-TCCTTATTCCC TTGCTCTTTTTGACT TERM 694 706760 - 706747 - g 78 -6.7 -4.65895 | TGCGGTATTTAAAAA CAGGA TTAT TCCTG CTCTCACTTGGGCCT Pnuc_0706 706731 - 707309 + | ferric reductase domain-containing protein Pnuc_0707 707349 - 707612 + | hypothetical protein TERM 695 707619 - 707650 + T 77 -8.2 -4.27474 | gap 1, opp_overlap 707648, overlap 707648 TGTAGATAAATTGTC TGGGTGCTTAG-TAA GAC TTAGCTAAGCAACCA TTTCTTGATGGATTT Pnuc_0708 708415 - 707636 - | hypothetical protein Pnuc_0709 708639 - 708857 + | hypothetical protein Pnuc_0710 709209 - 708862 - | alkylphosphonate utilization operon protein PhnA Pnuc_0711 709318 - 711147 + | AsmA family protein TERM 696 711133 - 711170 + T 70 -7.7 -3.6761 | gap 1, overlap 711130 TGGCCTGATATTTAT CCGGGCTCCAACTAAACT CTG AGTG-AGATAGAGCCCGG TATTTCTTAAAAAAC Pnuc_0712 711524 - 711177 - | membrane protein of unknown function Pnuc_0713 711798 - 711586 - | SlyX family protein Pnuc_0714 712046 - 713053 + | luciferase family protein Pnuc_0715 713466 - 713050 - | hypothetical protein Pnuc_0716 714026 - 713478 - | YaeQ family protein Pnuc_0717 714127 - 715740 + | FAD dependent oxidoreductase Pnuc_0718 715767 - 717182 + | oxygen-independent coproporphyrinogen III oxidase Pnuc_0719 717350 - 717994 + | OmpW family protein TERM 697 718019 - 718039 + T 100 -11.9 -5.60864 | opp_overlap 718021 718023 TCTTAGTTCTTGAGA TAGAGCCCT TAA GGGGCTCTA TTTTTTTGCTCTCTC TERM 698 718037 - 718021 - T 71 -9.4 -2.87564 | opp_overlap 718019, overlap 718023 TTAGTTCTTGAGATA GAGCCC TTAAG GGGCTC TATTTTTTTGCTCTC Pnuc_0720 718653 - 718057 - | putative ATP-ase TERM 699 720310 - 720299 - g 71 -3.6 -4.87318 | overlap 720301 TGGAAAATTCAAAAA GCCC GCTC GGAC AAAATACGAGCTGCC Pnuc_0721 718721 - 720643 + | ABC transporter related Pnuc_0722 720965 - 720660 - | hypothetical protein Pnuc_0723 721950 - 720970 - | heat shock protein DnaJ domain-containing protein TERM 700 721900 - 721920 + g 72 -10.3 -2.88215 | overlap 721897 721908 TTTGATTTCAGCTTC GGTGGCGCC ACG GGCGACGCC TAGTGTTTCGTAATA Pnuc_0724 723556 - 722009 - | Altronate dehydratase Pnuc_0725 724310 - 723609 - | pirin domain-containing protein TERM 701 724912 - 724897 - g 100 -4.8 -5.88197 | TCAAAGATAAAAAAA TCAATA TTGG TATTGA TGGTAGCGGAACCAA Pnuc_0726 724392 - 725804 + | TRAP transporter solute receptor TAXI family protein Pnuc_0727 726266 - 725808 - | phosphate-starvation-inducible E TERM 702 726354 - 726325 - R 70 -8 -3.66968 | opp_overlap 726332, overlap 726332 AATGAGATAAAGGAA GAAAAAAGAGGC ACTAGA GCCTCTTTTTTT CTAGAATTACATCAG TERM 703 726332 - 726347 + r 95 -6.1 -5.63504 | opp_overlap 726325 726332 TAAAGGAAGAAAAAA GAGGC ACTAGA GCCTC TTTTTTTCTAGAATT TERM 704 726347 - 726332 - R 95 -6.1 -5.59655 | opp_overlap 726332, overlap 726325 TAAAGGAAGAAAAAA GAGGC ACTAGA GCCTC TTTTTTTCTAGAATT Pnuc_0728 727645 - 726371 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pnuc_0729 727992 - 727660 - | hypothetical protein Pnuc_0730 730134 - 728008 - | oligopeptidase A TERM 705 728696 - 728721 + g 72 -9.1 -3.53444 | gap 1, opp_overlap 728696, overlap 728702 TCATCATGGGTAATA GTAGGCTGGCGT AAT ACGCCA-TCTAC TTTGACGGGCGGTGC TERM 706 728702 - 728716 + g 70 -10 -3.00525 | opp_overlap 728696, overlap 728696 TGGGTAATAGTAGGC TGGCGT AAT ACGCCA TCTACTTTGACGGGC TERM 707 730067 - 730055 - G 77 -10.5 -3.41602 | TTTACCTCAGCATAA GCGGC TAT GCCGC GGCCAAAGTTCAGTA Pnuc_0731 731042 - 730188 - | methenyltetrahydrofolate cyclohydrolase Pnuc_0732 731709 - 731062 - | response regulator receiver protein Pnuc_0733 734283 - 731746 - | multi-sensor signal transduction histidine kinase TERM 708 732803 - 732787 - G 72 -2.9 -5.06816 | opp_overlap 732768, overlap 732788 ATGGGCCAACAAAAA GTGACCC TTC GAGTCAT TGCCAAAATGCTCGC TERM 709 733971 - 733981 + g 71 -6.8 -4.08706 | ATTGTTCATGCGCAA GCTG TTT CAGC TTTGTGTCATCAGCA TERM 710 734388 - 734358 - H 73 -8.4 -3.75571 | opp_overlap 734350, overlap 734356 CAACGCAGCAAAATA CCACATTATGAGAA ATA TTATCATTATGTGG AAAATTGCTTGTTTA aceE 734477 - 737173 + | pyruvate dehydrogenase subunit E1 Pnuc_0735 737188 - 738792 + | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 711 739358 - 739343 - g 76 -4.7 -4.90266 | TGGATGAAGTAAAAA CCATG GCTAAA CATGG CATCACTTTTGGCGC Pnuc_0736 738802 - 740586 + | dihydrolipoamide dehydrogenase TERM 712 740611 - 740628 + T 100 -12.7 -4.27316 | opp_overlap 740611 TCACTAAAATAAAAA GCCCCGA GCAA TCGGGGC TTTTGCATTACAGGC TERM 713 740628 - 740611 - T 100 -12.7 -5.50723 | opp_overlap 740611 TCACTAAAATAAAAA GCCCCGA GCAA TCGGGGC TTTTGCATTACAGGC TERM 714 740675 - 740687 + T 77 -7.7 -4.17048 | overlap 740679 TTCTTGCTTGCTTTG CTAGC AGC GCTAG TTGTTTTGGCAACGG Pnuc_0737 741207 - 740653 - | phasin family protein TERM 715 741663 - 741685 + G 81 -13.4 -2.60423 | overlap 741660 741659 ATGGGTGTCTGGTTT GCGGTCAGGC TTG GCATGACCGC TGGGTTGGTTGCCAT Pnuc_0738 741408 - 742295 + | hypothetical protein Pnuc_0739 742403 - 743431 + | peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 Pnuc_0740 744275 - 743442 - | regulatory protein IclR Pnuc_0741 745402 - 744368 - | dihydroorotate oxidase TERM 716 745379 - 745367 - G 70 -4.7 -4.4078 | GGGGTCTAAGCAAAA GAGCC AAG GGCGC AATAAAGAGTAACGA Pnuc_0742 746158 - 745412 - | arginyl-tRNA-protein transferase aat 746892 - 746155 - | leucyl/phenylalanyl-tRNA--protein transferase Pnuc_0744 747461 - 746901 - | NUDIX hydrolase TERM 717 747013 - 746991 - G 78 -4.9 -5.03314 | gap 1, overlap 746995 GCGATCCGCAAAAAA CCATTCAAGC GTTT GCTTGA-CGG TAGGAAAGGCTAGGT Pnuc_0745 749294 - 747471 - | anthranilate synthase component I/chorismate-binding protein TERM 718 748789 - 748807 + g 70 -5.2 -4.37711 | overlap 748794 AGGCGTTGGTATAGT CCTAGGGG TGA TCCGTAGG TTTTCCCTTTGATCC Pnuc_0746 749892 - 749317 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type Pnuc_0747 750606 - 749980 - | DSBA oxidoreductase Pnuc_0748 751931 - 750618 - | recombination factor protein RarA Pnuc_0749 752343 - 751936 - | hypothetical protein Pnuc_0750 753309 - 752455 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 719 753106 - 753083 - G 79 -11 -3.31322 | overlap 753086 TTGAAGTCGGCATAA GAAGCGCTTC CTTT GACGCGCTTC AGAGCTGCATCCTTT Pnuc_0751 754039 - 753311 - | glutathione S-transferase domain-containing protein Pnuc_0752 755252 - 754053 - | aminotransferase, class I and II Pnuc_0753 755347 - 756123 + | hypothetical protein Pnuc_0754 756123 - 757334 + | hypothetical protein TERM 720 757347 - 757381 + T 93 -13.8 -3.15242 | opp_overlap 757356, overlap 757356 TAAGAAAATATGAAC AAGAAAAAAGCCGAGA AAC TCTCGGCTTTTTTTTA CTTTCATTTGTTTAA TERM 721 757356 - 757372 + T 100 -12.3 -6.02546 | opp_overlap 757356, overlap 757347 ATGAACAAGAAAAAA GCCGAGA AAC TCTCGGC TTTTTTTTACTTTCA TERM 722 757372 - 757356 - T 100 -12.3 -5.66229 | opp_overlap 757347 757356 ATGAACAAGAAAAAA GCCGAGA AAC TCTCGGC TTTTTTTTACTTTCA Pnuc_0755 757774 - 757400 - | hypothetical protein Pnuc_0756 758785 - 757796 - | malate dehydrogenase Pnuc_0757 758938 - 759675 + | GntR family transcriptional regulator Pnuc_0758 759808 - 760227 + | succinate dehydrogenase, cytochrome b subunit Pnuc_0759 760252 - 760617 + | succinate dehydrogenase, cytochrome b subunit Pnuc_0760 760622 - 762400 + | succinate dehydrogenase, flavoprotein subunit Pnuc_0761 762418 - 763122 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein Pnuc_0762 763119 - 763388 + | hypothetical protein TERM 723 763832 - 763802 - g 73 -7.6 -4.15788 | AAGGTTTCGAAGAAA TGGTCATGCACCAC ACT ATGGTTCATGAGCA AATGCAATTCTTCTT gltA 763471 - 764784 + | type II citrate synthase Pnuc_0764 764802 - 766211 + | isopropylmalate isomerase large subunit Pnuc_0765 766222 - 766428 + | hypothetical protein leuD 766464 - 767111 + | isopropylmalate isomerase small subunit Pnuc_0767 767135 - 768205 + | 3-isopropylmalate dehydrogenase TERM 724 768280 - 768270 - g 75 -3.2 -5.19879 | TGGCAAATACAAAAA CACC TTT GGTA GGTTTAGTTGGCTGG Pnuc_0768 768254 - 769411 + | aspartate-semialdehyde dehydrogenase Pnuc_0769 769429 - 770805 + | Tfp pilus assembly protein FimV-like protein truA 770815 - 771642 + | tRNA pseudouridine synthase A Pnuc_0771 771669 - 772343 + | phosphoribosylanthranilate isomerase TERM 725 773093 - 773103 + G 72 -3.2 -5.03314 | opp_overlap 773093 TGGCGGTGGTTCAAA TGCC ATG GGTA TTTTTTACCCATACA Pnuc_0772 772377 - 773570 + | tryptophan synthase subunit beta TERM 726 773686 - 773668 - g 76 -8.9 -3.70505 | opp_overlap 773667 773671, overlap 773671 CAAAGCAAGCGGAAA GAAGGGA TTGAT TCCCTTC ATTACTGCCGGTGAT Pnuc_0773 773621 - 774418 + | tryptophan synthase, alpha subunit Pnuc_0774 774425 - 775312 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit Pnuc_0775 775317 - 776642 + | FolC bifunctional protein TERM 727 777015 - 777003 - g 71 -3.3 -4.86293 | overlap 777004 GAAGAAAAACCAAAA GCGGA TGT TCCGA TAGAGGCACCCAAAG Pnuc_0776 776646 - 777485 + | sporulation domain-containing protein Pnuc_0777 777485 - 778051 + | colicin V production protein Pnuc_0778 778056 - 779594 + | amidophosphoribosyltransferase TERM 728 779605 - 779630 + F 72 -10.5 -2.56095 | opp_overlap 779609, overlap 779609 ACTAAAAAGCCACAG GAAATTGCCTC AAGG GAGGCAATTCC TCAATTCGGTGTCAA TERM 729 779626 - 779609 - f 83 -9.9 -3.87956 | opp_overlap 779605 779609 AAAAGCCACAGGAAA TTGCCTC AAGG GAGGCAA TTCCTCAATTCGGTG TERM 730 779609 - 779626 + F 73 -9.9 -3.22388 | opp_overlap 779609, overlap 779605 AAAAGCCACAGGAAA TTGCCTC AAGG GAGGCAA TTCCTCAATTCGGTG TERM 731 780226 - 780238 + G 80 -6.3 -4.82901 | opp_overlap 780199, overlap 780200 780199 CGGGCGCTTTATTTG CAGTT GAT AACTG TTTTTGTACGCCCGC Pnuc_0779 779655 - 780863 + | O-succinylhomoserine sulfhydrylase TERM 732 780880 - 780861 - g 72 -2.8 -5.08824 | overlap 780864 GGCGGACTCAAAAAA TAACCAGG TGCA CCTAGATA AATCCATGGGTTTTG Pnuc_0780 780844 - 781509 + | methyltransferase type 11 Pnuc_0781 782608 - 781502 - | ABC transporter related Pnuc_0782 783261 - 782608 - | molybdate ABC transporter, inner membrane subunit TERM 733 783657 - 783638 - g 74 -3.6 -5.0133 | opp_overlap 783640, overlap 783640 CATTCCCTCAAAAAA TATTCTGT ATAC ACAGAATT TACCGGATTCAACCT Pnuc_0783 783345 - 783698 + | hypothetical protein Pnuc_0784 783784 - 784275 + | OmpA/MotB domain-containing protein Pnuc_0785 784332 - 784838 + | hypothetical protein TERM 734 784849 - 784859 + T 71 -6.8 -4.04474 | overlap 784856 ATTAAATGATGTCTT CCGA GTA TCGG TTTGTATGCCGATCT TERM 735 785160 - 785184 + T 100 -14.5 -3.69333 | opp_overlap 785160 785165, overlap 785165 TGGTAGCAATATGAA CAAAAGACTGT TTG ACAGTCTTTTG TTTAACTAACTTATA TERM 736 785184 - 785160 - T 100 -14.5 -3.39449 | opp_overlap 785160 785165, overlap 785165 TGGTAGCAATATGAA CAAAAGACTGT TTG ACAGTCTTTTG TTTAACTAACTTATA TERM 737 785179 - 785165 - T 88 -8.6 -4.78753 | opp_overlap 785165 785160, overlap 785160 GCAATATGAACAAAA GACTGT TTG ACAGTC TTTTGTTTAACTAAC TERM 738 785165 - 785179 + T 90 -8.6 -4.90778 | opp_overlap 785160 785165, overlap 785160 GCAATATGAACAAAA GACTGT TTG ACAGTC TTTTGTTTAACTAAC Pnuc_0786 786147 - 785215 - | cytochrome c, class I Pnuc_0787 786906 - 786193 - | cytochrome c family protein TERM 739 787468 - 787491 + G 89 -11 -4.15044 | TTGTGCACATTCTTT GCGGTTGGCT TATT GGCCAATCGC TTTATTAAAGAGGAG Pnuc_0788 786985 - 787512 + | protein of unknown function DUF395, YeeE/YedE Pnuc_0789 787514 - 788083 + | rhodanese domain-containing protein Pnuc_0790 788282 - 788070 - | hypothetical protein TERM 740 788851 - 788825 - g 72 -3 -4.98531 | overlap 788826 788827 TCTTGAAATGAAAAA GCTCATTCATCA GCG TGATGAAAGAAT TAACCAACTCAAAGT Pnuc_0791 788346 - 788978 + | hypothetical protein Pnuc_0792 788993 - 789970 + | rhodanese domain-containing protein Pnuc_0793 789983 - 790300 + | regulatory protein, ArsR Pnuc_0794 790315 - 790527 + | hypothetical protein TERM 741 790535 - 790563 + T 70 -9.7 -2.64155 | opp_overlap 790538 790553, overlap 790532 790530 GCAAGTAAGTGTTAA TGAGGCATTCT GAGTCAA GGAATGCCTCA TGGCTTTACCCCCAG Pnuc_0795 791465 - 790569 - | UbiA prenyltransferase Pnuc_0796 791629 - 792345 + | cyclic nucleotide-binding protein TERM 742 792378 - 792363 - T 100 -10.4 -5.28176 | opp_overlap 792363 TGGAGGCATAAAAAA GGCTGC CTAA GCAGCC TTTTGGGGGCATTGA TERM 743 792363 - 792378 + T 86 -10.4 -4.09739 | opp_overlap 792363 TGGAGGCATAAAAAA GGCTGC CTAA GCAGCC TTTTGGGGGCATTGA Pnuc_0797 792706 - 792398 - | high potential iron-sulfur protein Pnuc_0798 793528 - 792719 - | hypothetical protein Pnuc_0799 794772 - 793531 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 744 793824 - 793835 + g 78 -5.8 -4.75174 | overlap 793823 CTACTTGTTTTCTAG CTGC TGCT GCAG TTTTTGAATTCGGTG TERM 745 794537 - 794567 + g 95 -2.6 -5.85737 | opp_overlap 794542, overlap 794553 ATTTTGTCCTTAATC CAAACGACACCA GGAGGGA TGATGTCCTTTG TTTTTTTCTTACTAT TERM 746 794553 - 794563 + g 79 -3.2 -5.33131 | opp_overlap 794542, overlap 794537 AAACGACACCAGGAG GGAT GAT GTCC TTTGTTTTTTTCTTA Pnuc_0800 794859 - 795779 + | beta-lactamase domain-containing protein TERM 747 796540 - 796562 + G 72 -9.1 -3.51708 | overlap 796541 GGCGGAAGGTGGAGA CGGTTCGGG AATGA CCCGAACCA TTAATTTAGAAGATG TERM 748 796541 - 796561 + G 78 -12.6 -2.70704 | overlap 796540 GCGGAAGGTGGAGAC GGTTCGGG AATGA CCCGAACC ATTAATTTAGAAGAT Pnuc_0801 795830 - 797185 + | oxidoreductase, molybdopterin binding Pnuc_0802 797169 - 798251 + | cytochrome c, class I Pnuc_0803 798335 - 798787 + | twin-arginine translocation pathway signal Pnuc_0804 798842 - 799150 + | sulfur oxidation protein (SoxZ) TERM 749 799230 - 799212 - g 71 -10.2 -2.65354 | opp_overlap 799210, overlap 799209 799208 TGCATCGTAAATTCA CCTTGGGC TTG GCCCTAGG AATATTAGCAGCGAG TERM 750 799441 - 799461 + G 93 -14.7 -3.34344 | AGGAGTTGTGAAGGG CGCGGCAGC GCA GTTGCCGCG TTACTTCAAAGATAC Pnuc_0805 799196 - 800008 + | hypothetical protein Pnuc_0806 800028 - 800666 + | hypothetical protein TERM 751 800700 - 800672 - f 95 -11.2 -4.73297 | gap 1, opp_overlap 800679 TAATCAATAAATAAA TGAAAGACAGGCC GATA GGCCTGT-TTTCA TAGAAGGAATCTTAT TERM 752 800679 - 800694 + F 89 -10.4 -4.25104 | opp_overlap 800672 TAAATAAATGAAAGA CAGGCC GATA GGCCTG TTTTCATAGAAGGAA Pnuc_0807 800714 - 802444 + | 5'-nucleotidase domain-containing protein Pnuc_0808 802469 - 802906 + | hypothetical protein TERM 753 802942 - 802969 + G 85 -7.1 -5.08824 | gap 1, overlap 802944 TTTATTACGAAATTC GA-TAGGGGTCC TGATT GGATCCCTATTC TTTTTTGGGTCCACC TERM 754 802944 - 802966 + G 93 -9.9 -4.64763 | overlap 802942 TATTACGAAATTCGA TAGGGGTCC TGATT GGATCCCTA TTCTTTTTTGGGTCC Pnuc_0809 802919 - 803875 + | beta-lactamase domain-containing protein Pnuc_0810 803935 - 804252 + | hypothetical protein TERM 755 804385 - 804395 + G 85 -5.4 -5.38549 | TTGCACCATGGGTGC CATC TCC GATG TTTTTATTATTTCCA Pnuc_0811 804272 - 805393 + | protein of unknown function DUF395, YeeE/YedE Pnuc_0812 805419 - 805856 + | protein of unknown function DUF395, YeeE/YedE Pnuc_0813 805858 - 806304 + | protein of unknown function DUF395, YeeE/YedE Pnuc_0814 806316 - 806699 + | hypothetical protein Pnuc_0815 806720 - 807139 + | thioesterase superfamily protein Pnuc_0816 807149 - 808246 + | rhodanese domain-containing protein TERM 756 808334 - 808354 + F 70 -8.3 -3.36785 | opp_overlap 808305 808337, overlap 808337 ATTCCCCCATACTGA CAATGCGCT GTT ATCGCATTG TTACTTAGGGTATGA TERM 757 809469 - 809455 - g 79 -2.8 -5.33026 | CAACCGAAACAAAAA CAAATC ATC GAATTG TGGGAATGCCAGAAT Pnuc_0817 808377 - 810386 + | cytochrome c, class I TERM 758 810441 - 810424 - T 95 -9.1 -5.4505 | opp_overlap 810424, overlap 810408 CTTTCCAATAAAAAA GCACCCC TCTG AGGGTGC TTTTTAGTATGTCAT TERM 759 810424 - 810441 + T 90 -8.4 -4.85129 | opp_overlap 810408 810424 CTTTCCAATAAAAAA GCACCC CTCTGA GGGTGC TTTTTAGTATGTCAT Pnuc_0818 811651 - 810473 - | acyl-CoA dehydrogenase domain-containing protein TERM 760 811869 - 811879 + G 71 -6.8 -4.07687 | ACCTTGCCTTATTTT GGGA CAG TCCC TTTTGGCGGCGGCAT Pnuc_0819 811746 - 812456 + | hypothetical protein TERM 761 812491 - 812505 + F 70 -8.6 -3.34715 | opp_overlap 812491 812504, overlap 812489 TTTTCCTGCTCTAAA CCGTTA AAA TAACGG TCTTTGCCCCCGGTC TERM 762 812505 - 812491 - f 72 -8.6 -3.53012 | opp_overlap 812491 812489, overlap 812504 TTTTCCTGCTCTAAA CCGTTA AAA TAACGG TCTTTGCCCCCGGTC Pnuc_0820 812591 - 814174 + | ABC transporter related TERM 763 814201 - 814231 + T 82 -8.4 -4.26019 | opp_overlap 814206, overlap 814206 CAAATCAGTCAGCAT AAAAATAAGCCCTT TAA ATGGGCTTATTTTC TTTTGCCTGTCGTTG TERM 764 814206 - 814226 + T 90 -8.3 -5.11836 | opp_overlap 814206, overlap 814201 CAGTCAGCATAAAAA TAAGCCCTT TAA ATGGGCTTA TTTTCTTTTGCCTGT TERM 765 814226 - 814206 - T 90 -8.3 -4.9218 | opp_overlap 814206 814201 CAGTCAGCATAAAAA TAAGCCCTT TAA ATGGGCTTA TTTTCTTTTGCCTGT Pnuc_0821 814477 - 814214 - | hypothetical protein Pnuc_0822 815646 - 814474 - | hypothetical protein TERM 766 815565 - 815549 - G 72 -5.7 -4.41548 | overlap 815550 TCATACTTTAGAAAA GGGCCCG AGT CAGGGCC AAGTAAAGCATTCCA Pnuc_0823 816035 - 815649 - | lactoylglutathione lyase Pnuc_0824 817709 - 816039 - | electron-transferring-flavoprotein dehydrogenase TERM 767 816637 - 816623 - G 71 -10 -3.22388 | opp_overlap 816616 CATTCAAGGCAGCAA CTGCAG CTT CTGCAG CAAGCATGCCAGTTT TERM 768 818095 - 818084 - g 73 -4.4 -4.74103 | opp_overlap 818084 TCGTCAAGTCAAAAA GATG GTTG CATC TTATGTTGGTGAAAA Pnuc_0825 817866 - 818567 + | 3-oxoacid CoA-transferase, A subunit Pnuc_0826 818606 - 819256 + | 3-oxoacid CoA-transferase, B subunit TERM 769 819233 - 819249 + F 77 -8.7 -3.86015 | opp_overlap 819246 GCTAAAACTGGCGCC CCTGTTG ATA CAACGGG TTTCTAACCAGCATC TERM 770 820611 - 820596 - g 75 -3.2 -5.18357 | opp_overlap 820579 820596, overlap 820588 CAACTTATTAAAAAA CTTGGG GTTT CTCAAG TCGATTGGTTGGGCA Pnuc_0827 819291 - 821171 + | cation diffusion facilitator family transporter Pnuc_0828 821181 - 823211 + | (p)ppGpp synthetase I, SpoT/RelA TERM 771 823348 - 823323 - f 70 -8.1 -3.71607 | opp_overlap 823323 CGAATAGGACCCAAA GCGCGGTTGCC CAAA AGCTGCCGCGC TTTATTTTTAGGTCA TERM 772 823323 - 823348 + F 93 -9.6 -4.89063 | opp_overlap 823323 CGAATAGGACCCAAA GCGCGGTTGC CCAAAA GCTGCCGCGC TTTATTTTTAGGTCA Pnuc_0829 823405 - 825327 + | threonyl-tRNA synthetase Pnuc_0830 825385 - 825894 + | translation initiation factor IF-3 TERM 773 826091 - 826070 - g 72 -2.9 -5.06451 | gap 1, overlap 826060 826057 826055 826071 GAGTAGCGCAAAAAA GCGCTTCACG GTT CGCGCAG-GC GGAACGATTAAACGA Pnuc_0831 826035 - 826232 + | ribosomal protein L35 Pnuc_0832 826258 - 826623 + | ribosomal protein L20 TERM 774 826652 - 826611 - f 70 -8.2 -3.75461 | opp_overlap 826576 826572 826611 826613 CAAATCCGTAGTAAA CGCTGCAGCTTAATCTTA GTTTTT TAAAACTAAGCTGCAATG GTTTCTCTCGACCAA TERM 775 826701 - 826717 + G 75 -11.5 -3.01712 | CGTGATTTCTTGGGA GCTGCCG ATT CGGCGGC TCTTGAGGACGCGAA Pnuc_0833 826650 - 827696 + | phenylalanyl-tRNA synthetase, alpha subunit Pnuc_0834 827720 - 830176 + | phenylalanyl-tRNA synthetase, beta subunit TERM 776 830261 - 830276 + G 84 -7.6 -4.7373 | opp_overlap 830261 830260 830263 ACCGTTACCAAGAAT GAGCTT TCTG AAGCTC TTTTTGATCAAGTGG Pnuc_0835 830222 - 830545 + | integration host factor, alpha subunit TERM 777 830567 - 830551 - g 70 -10.1 -3.06501 | overlap 830538 830536 CAGAGTTTGACGCAA GCTCGGC ACT ACCGAGC TCTCAACTTCCTCCT TERM 778 830710 - 830694 - g 76 -5.1 -4.85599 | opp_overlap 830694 CTTAGTCCACAAAAA CGACG CGGTAAC CGTCG TTACTATCAGCATCA Pnuc_0836 830523 - 830873 + | MerR family transcriptional regulator TERM 779 831442 - 831427 - g 72 -9 -3.50219 | AAGATGGCGAGATAA CCGCTA AGGC TAGCGG GACATTTACTCTAAG Pnuc_0837 831024 - 831464 + | thioesterase superfamily protein Pnuc_0838 831667 - 831951 + | histone family protein nucleoid-structuring protein H-NS TERM 780 832003 - 831980 - T 100 -16.8 -3.06679 | opp_overlap 831980 831984, overlap 831984 AATATTTTTAGTGAA CAAAGGCCGC TTAA GCGGCCTTTG TTTTAACTATATTTC TERM 781 831980 - 832003 + T 100 -16.8 -4.29981 | opp_overlap 831980 831984, overlap 831984 AATATTTTTAGTGAA CAAAGGCCGC TTAA GCGGCCTTTG TTTTAACTATATTTC TERM 782 831999 - 831984 - T 95 -11.8 -4.20516 | opp_overlap 831980 831984, overlap 831980 TTTTTAGTGAACAAA GGCCGC TTAA GCGGCC TTTGTTTTAACTATA TERM 783 831984 - 831999 + T 100 -11.8 -4.70515 | opp_overlap 831984 831980, overlap 831980 TTTTTAGTGAACAAA GGCCGC TTAA GCGGCC TTTGTTTTAACTATA Pnuc_0839 832717 - 832022 - | DNA binding domain-containing protein TERM 784 832648 - 832694 + g 70 -9.7 -2.94137 | gap 2, overlap 832647 TTTGAACTGTACCTA GGGATACCTGCAGTATCTTGGCG CTT TGTCGAG-TACTG-AGGTATTCC ATTTCTGAGGTAATT kgd 833018 - 835873 + | alpha-ketoglutarate decarboxylase TERM 785 836237 - 836203 - g 82 -11.3 -3.57615 | opp_overlap 836203, overlap 836194 GCAATACCTGCTAAA GCTGCTGCTCCTGCT GCTAA AGCTGGTGCAGCCGC GGCTCCTTCAGCTGC TERM 786 836315 - 836333 + G 79 -9.6 -3.72984 | CTGGACGTGATGGTC GCATCACT AAA GGTGATGC TTTAAATGCTTCTGC Pnuc_0841 835924 - 837099 + | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Pnuc_0842 837112 - 838548 + | dihydrolipoamide dehydrogenase TERM 787 838585 - 838615 + G 81 -12.7 -3.24747 | opp_overlap 838585 838586 CAACAAGAGTTAAAA GC-GCGCGGGTATCA AAG TGAT-CCCGCGCAGC TTCGTGCTGTAGAGC TERM 788 838615 - 838585 - g 95 -12.7 -4.32048 | opp_overlap 838585, overlap 838586 CAACAAGAGTTAAAA GC-GCGCGGGTATCA AAG TGAT-CCCGCGCAGC TTCGTGCTGTAGAGC TERM 789 838613 - 838586 - g 81 -12.8 -3.18144 | gap 1, opp_overlap 838585, overlap 838585 AACAAGAGTTAAAAG CGCGCGGGTATCA AAG TGAT-CCCGCGCA GCTTCGTGCTGTAGA Pnuc_0843 838549 - 839652 + | AFG1 family ATPase Pnuc_0844 839662 - 840510 + | phosphotransferase domain-containing protein Pnuc_0845 840541 - 841743 + | tryptophanyl-tRNA synthetase TERM 790 841776 - 841809 + F 95 -14.1 -2.92463 | gap 1, opp_overlap 841782, overlap 841782 ACACCACGACTTCAA T-CAAAACGCTTCGCC TTG GGTGAAGCGTTTTGCA TCTCTGGCTCCTAAA TERM 791 841802 - 841782 - f 91 -11.1 -4.42238 | opp_overlap 841776 841782 CGACTTCAATCAAAA CGCTTCGCC TTG GGTGAAGCG TTTTGCATCTCTGGC TERM 792 841782 - 841802 + F 100 -13.3 -4.26188 | opp_overlap 841782, overlap 841776 CGACTTCAATCAAAA CGCTTCGCC TTG GGTGAAGCG TTTTGCATCTCTGGC Pnuc_0846 841795 - 842316 + | hypothetical protein Pnuc_0847 842343 - 843266 + | dihydrodipicolinate synthase TERM 793 843298 - 843310 + G 76 -9.1 -3.72324 | overlap 843286 CTCTCGCCGTCTTTT GGCGA TAT TCGCC TTATTCCTAGCGGTA Pnuc_0848 843263 - 844408 + | NlpB/DapX family lipoprotein TERM 794 844467 - 844438 - T 90 -12.3 -3.77607 | opp_overlap 844445, overlap 844445 AAGAATTTGAGCAAA TAAAAAAGCCGCT TTTC AGCGGCTTTTTTT CTTCAAGAAGAAGAT TERM 795 844460 - 844445 - T 100 -10.4 -5.68438 | opp_overlap 844445, overlap 844438 TGAGCAAATAAAAAA GCCGCT TTTC AGCGGC TTTTTTTCTTCAAGA TERM 796 844445 - 844460 + T 100 -10.4 -5.7946 | opp_overlap 844445 844438 TGAGCAAATAAAAAA GCCGCT TTTC AGCGGC TTTTTTTCTTCAAGA Pnuc_0849 844649 - 844482 - | hypothetical protein Pnuc_0850 845993 - 844761 - | cupin 4 family protein TERM 797 844940 - 844928 - G 74 -3.4 -5.00616 | CCCCGTTGCAAAAAA CTTG CTTAC CAAG GCTCAAAATGCGGGT TERM 798 845632 - 845684 + g 81 -3.4 -5.42259 | gap 1, overlap 845653 GCTGGATGGTGAGCT TCCATGCCCTGCAACAATAAAGTCC AATT GGGCTTGTTAATAGCAGGG-ATGGA TTTTTTTGCAAATGG Pnuc_0851 846027 - 846650 + | putative FkbP-type peptidyl-prolyl cis-trans isomerase Pnuc_0852 847412 - 846654 - | serine O-acetyltransferase Pnuc_0853 848188 - 847436 - | RNA methyltransferase TERM 799 848464 - 848451 - g 74 -8.1 -3.87994 | opp_overlap 848452, overlap 848452 ACTGAGGTGGACAAA GCTGC TGAG GCAGC AATCATTGAAACGCT TERM 800 848804 - 848823 + G 80 -6.5 -4.74132 | opp_overlap 848798 848802 848804 TCGTGAAGATCAAGA TCTTGAG AAATAC CTCAAGA TTTTTGCTGAGATGT Pnuc_0854 848316 - 849104 + | inositol monophosphatase TERM 801 849167 - 849133 - T 87 -12.5 -3.28122 | gap 1, overlap 849131 GAGCACCTAAATAGA TGATCTGATTAAG-CT TTTA AGTCTTAATCAGATCA AGCGTACGCACACCT Pnuc_0855 849937 - 849149 - | UDP-2,3-diacylglucosamine hydrolase TERM 802 849894 - 849861 - G 88 -6 -5.61824 | gap 1, overlap 849862 849863 CAAAAGTCAAAAAAA CGCTG-CGCCGTCAA GGGCA TTGACGGCGTCAGAT GCAAATCTGAGATAA TERM 803 849893 - 849862 - G 80 -9.5 -3.94654 | gap 1, overlap 849861 849863 AAAAGTCAAAAAAAC GCTG-CGCCGTCAA GGGCA TTGACGGCGTCAGA TGCAAATCTGAGATA TERM 804 849892 - 849863 - G 82 -13 -2.94352 | gap 1, overlap 849862 849861 AAAGTCAAAAAAACG CTG-CGCCGTCAA GGGCA TTGACGGCGTCAG ATGCAAATCTGAGAT Pnuc_0856 850437 - 849934 - | peptidylprolyl isomerase TERM 805 849978 - 850010 + g 78 -4.7 -4.98531 | TCACTACATCCTCAG CAGGCACGTCTTGAT GAA ATCCTGAAGAGCCTG TTTTTACTTTGCGAA TERM 806 850203 - 850222 + g 72 -6.4 -4.35524 | TACCGCGATCGTTCT TGAGGCCA TTGT TAGCCTCA TTTTCAATTTCAGCA Pnuc_0857 851257 - 850442 - | TPR repeat-containing protein TERM 807 851227 - 851214 - G 75 -6.7 -4.4261 | GCTGCAATAGCAAAA GCCTT AAAA AAGGC GGGGATAGGTGCTTT TERM 808 852172 - 852199 + G 73 -4.2 -4.86621 | overlap 852180 TCGTGTCAATGAAGA GAAAATGTCCAA GTCT TTGGGTAATTTC TTTTTGATTCGAGAT Pnuc_0858 851345 - 852766 + | cysteinyl-tRNA synthetase Pnuc_0859 852766 - 853422 + | HhH-GPD family protein Pnuc_0860 853432 - 854403 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 809 854414 - 854449 + GF 71 -9.7 -2.82449 | opp_overlap 854414, overlap 854413 CTTAAGTCGCAAAAA CGAATTGCGGTCGCC CTCAGT GGTGGCCTCGATTCG GTTGTATTGCTCGAC TERM 810 854786 - 854800 + GF 74 -9.2 -3.50572 | CAATTGTTACGGGGT GCTGGC GTA GCCGGC TTATCTGGCATGCCT TERM 811 855527 - 855517 - gf 81 -6.8 -4.66264 | CAAAACCCTCAAAAA CCTG TTC CAGG AGAGCGATATCCCGC Pnuc_0861 854369 - 855697 + | tRNA(Ile)-lysidine synthetase TERM 812 856799 - 856774 - g 72 -5.5 -4.44548 | CACATCGAAGCAAAA GAAATTTCTGG AGAT CCAAAAGTTTC TAAGGTTTCAGTTGT Pnuc_0862 855748 - 856998 + | aspartate kinase TERM 813 857211 - 857226 + F 93 -7.5 -5.38958 | CGCAATATAGACTTA GCCCC CTAACC GGGGC TTTTTCTTTATCACT Pnuc_0863 857403 - 858170 + | metallophosphoesterase Pnuc_0864 859507 - 858200 - | HipA domain-containing protein Pnuc_0865 859848 - 859507 - | XRE family transcriptional regulator TERM 814 859920 - 859966 + H 86 -9 -4.39386 | opp_overlap 859919 859917 859920 859922 859930, overlap 859945 TAGGTCAATAAATAT GACTCATAAATAAGTCTTTAAG TAT TTTAATGACTTATATATAAGTC TTTTAATGGTTTACA TERM 815 859966 - 859920 - H 73 -10.5 -2.80958 | opp_overlap 859920 859945, overlap 859919 859917 859922 859930 TAGGTCAATAAATAT GACTCATAAATAAGTCTTTAA GTATT TTAATGACTTATATATAAGTC TTTTAATGGTTTACA TERM 816 860877 - 860890 + H 73 -2.3 -5.27938 | opp_overlap 860877 860878, overlap 860878 TATGTATCGAAAATA GGGCT CTCG AGCCA TTTTTCTTTGCCCGT Pnuc_0868 861113 - 862693 + | RND efflux system outer membrane lipoprotein Pnuc_0869 862918 - 863976 + | RND family efflux transporter MFP subunit TERM 817 864629 - 864617 - g 77 -3.4 -5.12172 | opp_overlap 864617 CATTAATAAACAAAA CGTA TTGCT TACG TCTGGTCAAATAGGG TERM 818 864955 - 864922 - g 75 -3.1 -5.25805 | gap 1, opp_overlap 864933 864933 864951, overlap 864925 864929 864933 AAGAAATGGAAAAAA TCACCAAGACACTTCC CAA GGAGGTTGCTTGG-GA AATTCCATTTGATAC Pnuc_0870 863979 - 867107 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Pnuc_0871 867196 - 867654 + | hypothetical protein Pnuc_0872 867749 - 868942 + | Formyl-CoA transferase Pnuc_0873 868956 - 869885 + | pyruvate carboxyltransferase TERM 819 870038 - 870064 + F 72 -9.6 -3.01712 | overlap 870042 AGAAGTTTTTTAGCG CTTATTTGTTGC TTT GCAACAAATAAA TGTTGCACCACAACA TERM 820 870079 - 870065 - f 74 -5 -4.67607 | opp_overlap 870042, overlap 870066 TTTGCAACAAATAAA TGTTGC ACC ACAACA AAATATTTTTTACAA TERM 821 870295 - 870267 - g 86 -11.7 -3.5013 | overlap 870263 870259 GCTGAAATCAACCAA GCTGCTGCTAAAG ATG CTTTGGCTGCAGC TCAAGATGCAAGCTC Pnuc_0874 870147 - 870722 + | hypothetical protein TERM 822 870739 - 870766 + T 80 -11.4 -2.75294 | opp_overlap 870726 870746, overlap 870746 TAGTTTTTCAGTATC AAAAAAACCGCC TTCG GGCGGTTTTTTC ATTTGCACAATTTAA TERM 823 870759 - 870746 - T 100 -9.5 -5.55664 | opp_overlap 870739 870746 TCAGTATCAAAAAAA CCGCC TTCG GGCGG TTTTTTCATTTGCAC TERM 824 870746 - 870759 + T 100 -9.5 -5.37593 | opp_overlap 870746, overlap 870739 TCAGTATCAAAAAAA CCGCC TTCG GGCGG TTTTTTCATTTGCAC Pnuc_0875 871366 - 870827 - | hypothetical protein Pnuc_0876 871744 - 872040 + | hypothetical protein Pnuc_0877 872070 - 872531 + | Smr protein/MutS2 Pnuc_0878 872562 - 872918 + | protein of unknown function DUF883, ElaB Pnuc_0879 872925 - 873293 + | putative transmembrane protein Pnuc_0880 873290 - 873571 + | hypothetical protein Pnuc_0881 874107 - 873589 - | adenine phosphoribosyltransferase Pnuc_0882 874119 - 874676 + | 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase Pnuc_0883 874686 - 876362 + | AMP-dependent synthetase and ligase Pnuc_0884 878146 - 876398 - | dihydroxy-acid dehydratase TERM 825 876908 - 876922 + g 88 -8.6 -4.8622 | AACAACTGCTCGGCC CTCATG TTC CATGAG TTTTTCATTCGCAGC Pnuc_0885 879122 - 878232 - | hypothetical protein Pnuc_0886 879633 - 879106 - | hypothetical protein Pnuc_0887 880946 - 879642 - | peptidase U32 Pnuc_0888 881224 - 881808 + | hypothetical protein TERM 826 881838 - 881863 + F 70 -9.1 -3.13728 | opp_overlap 881843, overlap 881843 CCGAGCCACAAAAGA AAAAACCACCT AAAA AGGTGGTTTTC TTGCATCTGGCTCCT TERM 827 881858 - 881843 - f 100 -9 -5.86976 | opp_overlap 881843 881838 CCACAAAAGAAAAAA CCACCT AAAA AGGTGG TTTTCTTGCATCTGG TERM 828 881843 - 881858 + F 89 -9 -4.70169 | opp_overlap 881843, overlap 881838 CCACAAAAGAAAAAA CCACCT AAAA AGGTGG TTTTCTTGCATCTGG Pnuc_0889 881968 - 882849 + | phosphomethylpyrimidine kinase TERM 829 883185 - 883164 - g 70 -8.8 -3.35813 | opp_overlap 883164 883163 TTGCATCGCAAGCAA CCCTTCAT TCTGTC ATGAAGGG CTTAATTCTGAAGAA Pnuc_0890 882980 - 883321 + | hypothetical protein Pnuc_0891 883318 - 883653 + | hypothetical protein Pnuc_0892 884576 - 883650 - | thiamine-phosphate pyrophosphorylase TERM 830 883851 - 883861 + g 82 -3.2 -5.47399 | GCCCAAACCTTGAGG TGCT GTT GGCA TTTTTTTCAAATTAG thiG 885406 - 884588 - | thiazole synthase TERM 831 885170 - 885180 + g 93 -6.8 -5.75945 | overlap 885162 GGTATTTGGCAGTAC TGGC ACC GCCA TTTTTTTTAAAAGAT Pnuc_0894 885628 - 885431 - | thiamine biosynthesis protein ThiS Pnuc_0895 886716 - 885619 - | FAD dependent oxidoreductase TERM 832 886739 - 886692 - G 77 -11.2 -3.15544 | gap 1, opp_overlap 886690 886688 886693, overlap 886696 CTCCACGCTGAGCAA GCGACACCGCTAGGAGTCGGCCC ATT AGGCCGGCTCC-AACGATGGCGT ACTTACTTTGCGCGA TERM 833 886693 - 886738 + g 77 -11.8 -2.89569 | gap 1, opp_overlap 886692 886696, overlap 886690 886688 TCCACGCTGAGCAAG CGACACCGCTAGGAGTCGGCC CATTA GGCCGGCTCCAA-CGATGGCG TACTTACTTTGCGCG TERM 834 886735 - 886696 - G 83 -13.6 -2.56715 | gap 1, opp_overlap 886693 886690 886688, overlap 886692 ACGCTGAGCAAGCGA CACCGCTAGGAGTCGGCCC ATT AGGCCGGCTCC-AACGATG GCGTACTTACTTTGC Pnuc_0896 888720 - 886777 - | thiamine biosynthesis protein ThiC TERM 835 887257 - 887241 - G 74 -8.7 -3.88498 | overlap 887236 GCGTGACATAGCAAA GCATGGC TGT GCCATAC CAACCAATTTGCGCT Pnuc_0897 889775 - 888942 - | NUDIX hydrolase Pnuc_0898 891516 - 890284 - | major facilitator transporter Pnuc_0899 892799 - 891516 - | Formyl-CoA transferase TERM 836 892899 - 892880 - g 72 -9.2 -3.52111 | opp_overlap 892880, overlap 892871 CTAAAAGGACTAGAA CCAGTCCG TCAG CGGCCTGG TATGTACACCCGAAC TERM 837 893336 - 893317 - g 74 -8.6 -3.96534 | gap 1, overlap 893318 893321 CTCAAAAGAAGATAA GTCACACGG TAC CCGTGTG-C GTGCATGGCCAGATA TERM 838 893768 - 893792 + G 70 -9.3 -3.35996 | opp_overlap 893763 893764 893767 TTTATCGAAATGCAT GCTTTGCAGCC TAA GGGTGTAAAGC TTATGCCTGAGGATG Pnuc_0900 892817 - 894805 + | DNA topoisomerase IV subunit B TERM 839 895966 - 895953 - g 78 -5.3 -4.93696 | GCCAAAGAGTAAAAA CATTG ATGT CAATG AATTTGTAAATCTAT Pnuc_0901 894877 - 897258 + | DNA topoisomerase IV subunit A Pnuc_0902 898239 - 897280 - | hypothetical protein TERM 840 898928 - 898873 - g 71 -3.9 -4.89567 | overlap 898889 TTTGAAAACAGAAAA CAACGCTTTTATCCAAGACGTCGAC ACTCCA GCCGACATCCTGGCCTTAGGCGTTA CAAAAAGTTAGATTT Pnuc_0903 898289 - 898939 + | hypothetical protein Pnuc_0904 899391 - 898936 - | endoribonuclease L-PSP Pnuc_0905 900602 - 899427 - | hypothetical protein TERM 841 900045 - 900025 - G 72 -6.1 -4.25104 | opp_overlap 900038 CCTTCGCGAGCAAAA CGCCGTAAG CGT CTTAAAGCG ACTTTAATATTGCGC TERM 842 900257 - 900270 + g 70 -2.3 -5.02074 | opp_overlap 900257 TTTGCTCTTTTAAAA GCTCT TCTA AGCGC TTTTTTAAGGCCTCA Pnuc_0906 901502 - 900633 - | ATPase TERM 843 900911 - 900925 + g 75 -10 -3.59262 | overlap 900898 900905 900895 GATGGTGGACATCCA CGATGC TTT GCATCG TTTGCGCATCTGGAA Pnuc_0907 901677 - 902042 + | putative periplasmic cytochrome type-c oxidoreductase signal peptide protein Pnuc_0908 902056 - 902421 + | cytochrome c, class I TERM 844 902471 - 902442 - T 82 -10.9 -3.5812 | opp_overlap 902447, overlap 902447 TACTGAGCACAAATA CAAAAGGCTTAGA TTTT TCTAAGCCTTTTT TGTTTTCTAAATGTC TERM 845 902447 - 902466 + T 100 -10.8 -5.86976 | opp_overlap 902442 902447 AGCACAAATACAAAA GGCTTAGA TTTT TCTAAGCC TTTTTTGTTTTCTAA TERM 846 902466 - 902447 - T 93 -10.8 -4.85822 | opp_overlap 902447, overlap 902442 AGCACAAATACAAAA GGCTTAGA TTTT TCTAAGCC TTTTTTGTTTTCTAA Pnuc_0909 903126 - 902488 - | GntR family transcriptional regulator TERM 847 903521 - 903531 + G 74 -5.4 -4.62069 | TTTTCAACTGCTGAA GCAT CAA ATGC TTTTTACCGTGAAGC TERM 848 903684 - 903713 + G 71 -7.3 -4.1399 | opp_overlap 903685 903686, overlap 903685 TTGAAGATATGAAAA TTTTATTTAACGG CATT CCGTTAGATAAGG TTTCTGTCTCAATGA Pnuc_0910 903188 - 905407 + | methylmalonyl-CoA mutase Pnuc_0911 905423 - 906448 + | arginine/ornithine transport system ATPase Pnuc_0912 906459 - 907991 + | carboxyl transferase TERM 849 908397 - 908368 - g 72 -5.8 -4.386 | opp_overlap 908386, overlap 908370 CAATGGGCGACAAAA TTGCCTCTAAAA AGCTGG CTTTAGAGGCTA AAGTTAATACGATTC TERM 850 908736 - 908752 + G 72 -5.1 -4.71426 | opp_overlap 908739, overlap 908739 CACCAAAAAGTCATC GAAGAAG CGC CTTCTCC TTTTATTGATCCAGC Pnuc_0913 908007 - 910043 + | acetyl-CoA carboxylase, biotin carboxylase TERM 851 910340 - 910368 + G 71 -9.5 -3.27525 | opp_overlap 910331, overlap 910336 910335 AGATGACTTGCCTAA GGCCGTTGAGTGG CTC TCAGCCAACGGCC TTCGATTTGCGCCGG Pnuc_0914 910059 - 910526 + | lactoylglutathione lyase TERM 852 910725 - 910697 - g 71 -10.3 -2.62184 | CCCTTGGGTAGAGGA TCTGTTGCAGGAT GCT AACCTGCAACTGA AGGATATGGACGCCA Pnuc_0915 910617 - 911294 + | peptidase M22, glycoprotease Pnuc_0916 911294 - 911842 + | ribosomal-protein-alanine acetyltransferase Pnuc_0917 911839 - 912378 + | hypothetical protein Pnuc_0918 913739 - 912420 - | hypothetical protein TERM 853 913210 - 913196 - G 71 -7.2 -4.1347 | CCGCAATCACATAAA TCATCA TGA TGATGA GAATGGCTGATTCAG Pnuc_0919 913789 - 914913 + | alanine racemase TERM 854 914943 - 914962 + T 91 -6.5 -5.4505 | opp_overlap 914943 TTAACAAATAAAAAA TCCTCTA CATATT TAGAGGA TTTTTTATTGGGCGC TERM 855 914962 - 914943 - T 100 -6.5 -5.80003 | opp_overlap 914943 TTAACAAATAAAAAA TCCTCTA CATATT TAGAGGA TTTTTTATTGGGCGC Pnuc_0920 915872 - 914985 - | putative transmembrane protein Pnuc_0921 915977 - 916933 + | RluA family pseudouridine synthase Pnuc_0922 916930 - 917715 + | hypothetical protein TERM 856 917883 - 917856 - g 81 -12.7 -3.13867 | opp_overlap 917854, overlap 917852 GCAGGTATGAATACA GGTGCAACGCC GGCTTT GGCGCCGCACC ATATGGCATTAATTC TERM 857 919090 - 919072 - g 83 -6.1 -5.00616 | TTTGCGGCGAAAAAA TTGATCT AGGAA AGATCAA ATGTCCCGCATATAT Pnuc_0923 917835 - 919466 + | poly(R)-hydroxyalkanoic acid synthase, class I TERM 858 919672 - 919691 + G 76 -8.6 -4.0616 | GCTTGGATATGATTT CATTGCCT CTGA GGGCAATG TTTCTGATTGGGATA fabG 919508 - 920248 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 859 920570 - 920584 + G 82 -5.6 -5.24129 | overlap 920572 TTCTTGAAGAAGAGG CTGGTG GAG CACCTG TTTTTTCTACCCAGA TERM 860 920572 - 920582 + G 74 -6.8 -4.25873 | overlap 920570 CTTGAAGAAGAGGCT GGTG GAG CACC TGTTTTTTCTACCCA Pnuc_0925 920359 - 920919 + | polyhydroxyalkonate synthesis repressor, PhaR TERM 861 920946 - 920965 + G 73 -7.8 -4.02535 | overlap 920947 AAAATTGGTTTTGTA TCCTTGGG ATGC CCCAAGGC TTTAGTTGATTCTGA TERM 862 920947 - 920964 + G 75 -11.3 -3.00798 | overlap 920946 AAATTGGTTTTGTAT CCTTGGG ATGC CCCAAGG CTTTAGTTGATTCTG Pnuc_0926 920922 - 922280 + | MiaB-like tRNA modifying enzyme YliG TERM 863 922343 - 922329 - f 80 -10 -3.65415 | overlap 922325 GTAAGTACAAATCAA GCCCAA TTT TTGGGC ATAGCTAAGGGGATT Pnuc_0927 922362 - 923546 + | beta-ketothiolase Pnuc_0928 924477 - 923587 - | phosphoserine phosphatase SerB TERM 864 923643 - 923617 - G 82 -13 -3.10641 | opp_overlap 923617 923627, overlap 923606 923633 TAAGGCAGCATCCAA GCCGACACGG TCAAAAG CCGCGTCGGC TTTTTCTTTGACTAC TERM 865 923617 - 923643 + g 100 -11.5 -5.30616 | opp_overlap 923606 923617 923633, overlap 923627 TAAGGCAGCATCCAA GCCGACACGGT CAAAA GCCGCGTCGGC TTTTTCTTTGACTAC TERM 866 923643 - 923633 - G 76 -8.2 -4.13014 | opp_overlap 923617 923627, overlap 923606 923617 CCGACACGGTCAAAA GCCG CGT CGGC TTTTTCTTTGACTAC TERM 867 923719 - 923739 + g 74 -11.1 -2.84587 | overlap 923718 923732 TATGAGATCGTTTGC GCCGTCGCC CAT GGTGATGGC ATTACTTTTATCGAC TERM 868 923887 - 923898 + g 70 -2.2 -4.96848 | TTGTTTAAATCCTAA TTGC TCAC GCAG TTTTTCTGTAAAGAA Pnuc_0929 928040 - 924498 - | transcription-repair coupling factor Pnuc_0930 928064 - 928816 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 869 929268 - 929254 - g 76 -5 -4.74504 | ACCTGAAGGCAAAAA CAAATG AAT CACTTG GACATTTGGGGCGGG Pnuc_0931 928827 - 929330 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Pnuc_0932 929377 - 929967 + | hypothetical protein TERM 870 930585 - 930573 - g 77 -9.1 -3.84996 | opp_overlap 930571 AATACACAACTGAAA TCGGC GAA GCCGA AATTGATCGCGCCAT TERM 871 930638 - 930623 - g 73 -7.6 -4.08557 | CTGCGTAAACAACAA GTGCAT TACC ATGCAC GCGGCGAAGCTGGTG TERM 872 931431 - 931413 - g 77 -11.8 -2.90075 | opp_overlap 931414 GTCGCCTGAAGGATA TCGAGAAC CTT GTTCTCGA AGATAACGTGATTAA Pnuc_0933 930179 - 931516 + | trigger factor Pnuc_0934 931548 - 932177 + | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 873 932838 - 932828 - g 70 -2.4 -4.93318 | opp_overlap 932827 932828 TACAACGTAGAAAAA GCGC AGC GCGG TATTGTCTATATTGA clpX 932216 - 933577 + | ATP-dependent protease ATP-binding subunit TERM 874 933602 - 933617 + F 93 -10.4 -5.16472 | GTTTTTGCTATTTTT GGGGCA TTTT TGCCCC TTTTTTGCACTTTTT TERM 875 935003 - 935015 + G 82 -7.7 -4.57882 | opp_overlap 935003 935002 GCCTTACAAAAGTAG GGGTT CGC AACCC TTTATTCTTATTAGA Pnuc_0936 933757 - 936189 + | ATP-dependent protease La TERM 876 936560 - 936581 + G 70 -2.3 -5.08824 | overlap 936558 936561 CATCCTTTGTGATGT TCGGAAT TTCGAGCT ATTCCGG TTTTTTGGATAAAGA Pnuc_0937 936481 - 937944 + | hypothetical protein TERM 877 938008 - 937987 - T 80 -10.2 -3.70853 | opp_overlap 937987 937986 937985 937989 938005 TTAAGCATCGAATAA TATGGGGC CATTGC GCCCCATA CGTTTTTGAAAAGTA Pnuc_0938 938621 - 937962 - | arylesterase TERM 878 937987 - 938008 + g 71 -10.2 -2.60508 | opp_overlap 937987, overlap 937986 937985 937989 938005 TTAAGCATCGAATAA TATGGGGC CATTGC GCCCCATA CGTTTTTGAAAAGTA Pnuc_0939 938624 - 939298 + | ABC transporter related TERM 879 939680 - 939650 - g 71 -9.7 -3.15249 | opp_overlap 939641 939646 939645, overlap 939637 GACATTGCCCAGCAA TGCGCTCTTAACG TATTG CGTTTAGAGCGCG GCATACAGTTTTCCT Pnuc_0940 939320 - 943357 + | phosphoribosylformylglycinamidine synthase TERM 880 943403 - 943430 + G 73 -11.4 -2.71144 | TCGGAAAGCGGGGGT GTTCGCTACC TGCATTTT GGTAGCGAAC TCATTCAAGGCGCTA TERM 881 943528 - 943497 - g 80 -12.4 -3.00353 | opp_overlap 943525, overlap 943494 943521 ATAACCAGCAAATGA TGGCTTGGCTTCTA TTTC TAGAAACCAAGCCT GGCATGCGCATAGCT Pnuc_0941 943370 - 944125 + | hypothetical protein TERM 882 944183 - 944154 - T 90 -12.3 -3.70902 | opp_overlap 944160, overlap 944160 GCGTTGATATGCAAA GAAAAAGGCGATC TATT GATCGCCTTTTTT ATTCCGACATATTTC TERM 883 944177 - 944160 - T 100 -11.3 -5.31519 | opp_overlap 944160, overlap 944154 ATATGCAAAGAAAAA GGCGATC TATT GATCGCC TTTTTTATTCCGACA TERM 884 944160 - 944177 + T 100 -11.3 -5.4505 | opp_overlap 944154 944160 ATATGCAAAGAAAAA GGCGATC TATT GATCGCC TTTTTTATTCCGACA Pnuc_0942 946804 - 944219 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 885 946103 - 946117 + g 75 -2.8 -5.24129 | opp_overlap 946103 GACATCTCCAACATA GGCAAT TTG ATTCCC TTTTTTCTGGAGGGC TERM 886 946858 - 946848 - R 81 -6.8 -4.72486 | opp_overlap 946847 TAGAAAGGCCAAAAA GGGA TTT TCCC CCTATTTTGCAAATT Pnuc_0943 947152 - 946964 - | hypothetical protein Pnuc_0944 947606 - 947160 - | hypothetical protein TERM 887 948320 - 948306 - g 72 -8.6 -3.65754 | AGAAATTACGTGAAA TTGGCA TCA TGCCAA CAGTATTGTTATGCC Pnuc_0945 947693 - 949354 + | CTP synthetase TERM 888 949832 - 949820 - g 70 -9.1 -3.36803 | TAATGTGATTGAGAA GGCTC GTG GAGCC GCTGCAGAAATGGGT Pnuc_0946 949365 - 950228 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 889 950528 - 950541 + G 70 -2.3 -5.08824 | ATTTTGGGCTTGGAT GCTAG CGAA CAAGC TTTTTTAGATCACAC eno 950279 - 951565 + | phosphopyruvate hydratase TERM 890 951736 - 951686 - g 72 -6.4 -4.24948 | gap 3, overlap 951690 951691 CTATGAGATGGAAAA GCAAGTG-GAATTGC-AGGAGGCTA AAAA TAGCCTCCTAGCACTTCGCAAT-GC AAAACTTGAAGGTGA TERM 891 951732 - 951691 - g 72 -10.4 -2.81683 | gap 2, overlap 951690 951686 AGATGGAAAAGCAAG TG-GAATTGC-AGGAGGCTA AAAA TAGCCTCCTAGCACTTCGCA ATGCAAAACTTGAAG Pnuc_0948 951585 - 951902 + | septum formation initiator Pnuc_0949 952878 - 951913 - | Hsp33 protein Pnuc_0950 952934 - 954340 + | glutamyl-tRNA synthetase TERM 892 954593 - 954605 + T 79 -4.8 -5.01535 | overlap 954602 GGGGTTCGAATCCCC CTGG GGACG CCAG TTTTTCTGGTTGTAG TERM 893 954747 - 954762 + T 93 -7.5 -5.4756 | opp_overlap 954747 AAAATATGACACTAA GCCCC TTCATC GGGGC TTTTTTATTGAACTT Pnuc_0951 955501 - 954767 - | hypothetical protein TERM 894 955135 - 955125 - G 88 -8.2 -4.82901 | GGGTGGGCATAAAAA GCGG TGG CCGC CTGCAATCGATATGT TERM 895 955496 - 955511 + g 74 -3.3 -4.93547 | ATAGGGTAGAAGTAC GTTCA CTATAT TGAAC TTTTTAGTTGGTTAA Pnuc_0952 956427 - 955552 - | hypothetical protein Pnuc_0953 956557 - 956913 + | hypothetical protein Pnuc_0954 956913 - 957149 + | phosphopantetheine-binding Pnuc_0955 957146 - 958393 + | beta-ketoacyl synthase Pnuc_0956 958755 - 958396 - | hypothetical protein Pnuc_0957 959374 - 958766 - | hypothetical protein TERM 896 960094 - 960106 + G 73 -4.1 -4.8622 | AATATCGAGGCTGTA GCAGA AGC TTTGC TTTTTGCTTCCAAAG Pnuc_0958 959533 - 960432 + | 2-hydroxy-3-oxopropionate reductase TERM 897 960625 - 960671 + G 72 -3 -4.9218 | overlap 960626 960628 960629 ACCGCACATATTGAT TCTTCTAAAGCAGACCGATTGA TTG TTATTGGGTCTTCTTTAGGTGG TTTTTATGCTAACTA Pnuc_0959 960442 - 961032 + | hypothetical protein Pnuc_0960 961120 - 961689 + | HNH endonuclease TERM 898 961999 - 962009 + G 72 -8.2 -3.75153 | opp_overlap 961998, overlap 961998 TAGATGGAAGTCAAC GGGG TAC CCCC TTTAAATTACCCGAA Pnuc_0961 961701 - 962675 + | hypothetical protein Pnuc_0962 963203 - 962679 - | Ion transport 2 domain-containing protein TERM 899 963129 - 963141 + g 70 -4.8 -4.41348 | CCACAAGTCCTGGTT TGCC ATATC GGCA TTTATTTCACCAAAG Pnuc_0963 963974 - 963264 - | ankyrin Pnuc_0964 964762 - 963971 - | TatD family hydrolase Pnuc_0965 965927 - 964794 - | DNA-directed DNA polymerase Pnuc_0966 966584 - 965940 - | dTMP kinase Pnuc_0967 967672 - 966599 - | aminodeoxychorismate lyase TERM 900 967026 - 967036 + g 75 -3.2 -5.1675 | GGCGATTTGAGGGGT GAGT TTG GCTC TTTTTTGCTCCATGA TERM 901 968260 - 968234 - g 76 -2.3 -5.28481 | overlap 968235 968238 TAGGTAACGAAAAAA CTGA-GCCCCCTT TTG AAGGGGGTATC-G ATGCCTGGAACGACC Pnuc_0968 967693 - 968703 + | glycine cleavage T protein (aminomethyl transferase) Pnuc_0969 968721 - 969578 + | hypothetical protein Pnuc_0970 970064 - 969582 - | thioesterase superfamily protein Pnuc_0971 970120 - 971586 + | hypothetical protein Pnuc_0972 971616 - 972020 + | methionine-R-sulfoxide reductase Pnuc_0973 972053 - 972601 + | intracellular septation protein A Pnuc_0974 972598 - 972882 + | BolA family protein Pnuc_0975 972941 - 973732 + | PpiC-type peptidyl-prolyl cis-trans isomerase Pnuc_0976 974909 - 973746 - | major facilitator transporter TERM 902 974890 - 974877 - G 89 -5.9 -5.71295 | ATATAAAAAGAAAAA GGACC CGAA GGCCC AGCGTAGCGAAGGCG Pnuc_0977 976040 - 974925 - | chorismate synthase Pnuc_0978 976538 - 976083 - | CBS domain-containing protein Pnuc_0979 977464 - 976616 - | putative ribonuclease BN TERM 903 976845 - 976833 - G 81 -3.3 -5.40474 | AGGGCTGCAAAAAAA CCCCC ACT GAAGG CATCGGATAGGGAAA Pnuc_0980 977487 - 978095 + | flavodoxin/nitric oxide synthase TERM 904 978365 - 978383 + G 71 -7.4 -3.8709 | AATTTTGGAGTCAGG CGCTAACT TTT GGTTGGCG TTTCTCGAAACCTTT Pnuc_0981 978105 - 978497 + | membrane protein-like protein TERM 905 979872 - 979860 - g 71 -6.9 -4.14472 | TGAAGACTCTTAAAA GGGCC TTA GACCC CCAAAATATCCTCAA Pnuc_0982 978494 - 979912 + | FAD linked oxidase domain-containing protein TERM 906 979902 - 979934 + T 100 -5.7 -5.73339 | overlap 979904 ATCCTCACAAAGTTG TCTCAATTTAGCCAA TTT TTGGTTAATTTGATA TTTTTTTGTAATTCT TERM 907 979904 - 979932 + T 87 -8.3 -4.48967 | overlap 979902 CCTCACAAAGTTGTC TCAATTTAGCCAA TTT TTGGTTAATTTGA TATTTTTTTGTAATT TERM 908 980240 - 980208 - T 90 -12.4 -3.62224 | opp_overlap 980208 980213, overlap 980194 980213 ATATTGCTCTAACAA TAAAACCTAAATAA TTGAT TTATTTAGGTTTTA TTAATTTTTACAGCA TERM 909 980208 - 980240 + T 93 -12.4 -3.80855 | opp_overlap 980194 980208 980213, overlap 980213 ATATTGCTCTAACAA TAAAACCTAAATAA TTGAT TTATTTAGGTTTTA TTAATTTTTACAGCA TERM 910 980213 - 980235 + T 86 -7.9 -4.93177 | opp_overlap 980213 980208, overlap 980208 GCTCTAACAATAAAA CCTAAATAA TTGAT TTATTTAGG TTTTATTAATTTTTA TERM 911 980235 - 980213 - T 86 -7.9 -4.89477 | opp_overlap 980208 980213, overlap 980208 GCTCTAACAATAAAA CCTAAATAA TTGAT TTATTTAGG TTTTATTAATTTTTA Pnuc_0983 981169 - 980231 - | alpha/beta hydrolase fold TERM 912 981206 - 981189 - R 93 -7.7 -5.49729 | AAGCACTCAAAAAAA GAACCTC CGAA GAGGCTC TCGATATTATTTTTA Pnuc_0984 981482 - 981219 - | hypothetical protein Pnuc_0985 982175 - 981486 - | putative lipoprotein Pnuc_0986 982602 - 982204 - | hypothetical protein Pnuc_0987 983354 - 982620 - | ABC transporter related Pnuc_0988 984056 - 983388 - | polar amino acid ABC transporter, inner membrane subunit Pnuc_0989 984860 - 984078 - | polar amino acid ABC transporter, inner membrane subunit Pnuc_0990 985827 - 984913 - | extracellular solute-binding protein TERM 913 985361 - 985371 + g 80 -5.4 -5.00616 | GAAGTAGTGCCGGTT GTAG TGG CTAC TTTTTTACCGGCCAA Pnuc_0991 987455 - 986118 - | NADH dehydrogenase TERM 914 987785 - 987772 - R 86 -8.1 -4.98531 | opp_overlap 987772 GTCGCAAATTAAAAA CCACC CGAA GGTGG TTTAACTAGTTTGTG TERM 915 987772 - 987785 + r 70 -8.1 -3.75295 | opp_overlap 987772 GTCGCAAATTAAAAA CCACC CGAA GGTGG TTTAACTAGTTTGTG Pnuc_0992 989005 - 987812 - | choloylglycine hydrolase Pnuc_0993 989788 - 989348 - | putative PAS/PAC sensor protein TERM 916 989854 - 989841 - R 93 -8.1 -5.46657 | opp_overlap 989841 TACCCCAATAAAAAA CCACC CGAA GGTGG TTCTCAGGGGCGCAT Pnuc_0994 990319 - 989876 - | cyanate hydratase Pnuc_0995 991213 - 990350 - | nitrate ABC transporter, ATPase subunits C and D Pnuc_0996 992063 - 991203 - | nitrate ABC transporter, inner membrane subunit TERM 917 991871 - 991882 + g 70 -2.2 -5.00884 | CCATTTGCGTTAAGG TTGG GAAT CCAG TTTTTTGAACAGGAT Pnuc_0997 993452 - 992079 - | ABC transporter nitrate-binding protein Pnuc_0998 994276 - 993473 - | uroporphyrin-III C-methyltransferase TERM 918 993611 - 993594 - G 78 -4.9 -5.08824 | overlap 993597 TGCTTATCTAAAAAA TGATGAT GAAC ATCACCA AAGCGCAATTCATCT TERM 919 994960 - 994949 - g 70 -2.2 -5.0065 | overlap 994944 CATGGATAAAGAAAA GCGT GACT ACAC TTTTGCGCAAACTTT Pnuc_0999 994428 - 995723 + | ABC transporter periplasmic protein TERM 920 996519 - 996501 - g 71 -10.4 -2.62171 | opp_overlap 996504, overlap 996498 TACATTGCCAAAGAG GTATCGTT GTT AACGATAC TCTGCAAACGTTTGA Pnuc_1000 995720 - 998170 + | nitrite reductase (NAD(P)H), large subunit Pnuc_1001 998163 - 998513 + | nitrite reductase (NAD(P)H), small subunit TERM 921 998620 - 998586 - g 95 -12.8 -3.83816 | overlap 998576 AGAAAGTAACGGAAA GATCGAGGTAACCGGG GTT CGCGGCGACCCCGATC ATCCTGCAAACTTTG Pnuc_1002 998506 - 1001346 + | molybdopterin oxidoreductase Pnuc_1003 1001354 - 1002262 + | hypothetical protein Pnuc_1004 1002266 - 1002775 + | HPP family protein+B94 TERM 922 1002796 - 1002808 + T 74 -6.3 -4.41616 | opp_overlap 1002796 1002795 CTTAGCCCAACGAAC GCTTT ATT AAAGC TTTGTTTAAAAAACT Pnuc_1005 1003306 - 1002782 - | CBS domain-containing protein Pnuc_1006 1004454 - 1003303 - | HPP family protein+B94 Pnuc_1007 1004556 - 1005023 + | hypothetical protein Pnuc_1008 1005007 - 1005606 + | nitroreductase Pnuc_1009 1006211 - 1006579 + | hypothetical protein TERM 923 1007467 - 1007482 + G 74 -5.4 -4.63932 | overlap 1007466 ATAACTATGGAATCC CTACCT CTGA AGGTGG TTTTATTCAGCAGTC Pnuc_1010 1006641 - 1008728 + | TonB-dependent receptor Pnuc_1011 1010085 - 1008733 - | phosphoglucosamine mutase Pnuc_1012 1010989 - 1010126 - | dihydropteroate synthase TERM 924 1010964 - 1010940 - G 100 -12.2 -5.29885 | opp_overlap 1010940 1010938 1010941 1010961, overlap 1010941 AAGTCAAAAAGAAAA CGCCCACAAC GCCAT GTTGTGGGCA TCTTGTGTATGCCTA TERM 925 1010940 - 1010964 + g 77 -10.7 -3.37912 | opp_overlap 1010940 1010941, overlap 1010938 1010941 1010961 AAGTCAAAAAGAAAA CGCCCACAACG CCA TGTTGTGGGCA TCTTGTGTATGCCTA TERM 926 1010963 - 1010941 - G 95 -13.5 -3.75491 | opp_overlap 1010941 1010940 1010938 1010961, overlap 1010940 AGTCAAAAAGAAAAC GCCCACAAC GCCAT GTTGTGGGC ATCTTGTGTATGCCT TERM 927 1010941 - 1010963 + g 83 -14.2 -2.62265 | opp_overlap 1010940 1010941, overlap 1010940 1010938 1010961 AGTCAAAAAGAAAAC GCCCACAACG CCA TGTTGTGGGC ATCTTGTGTATGCCT Pnuc_1013 1012870 - 1011005 - | ATP-dependent metalloprotease FtsH Pnuc_1014 1013715 - 1013041 - | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 928 1013266 - 1013254 - G 82 -7.7 -4.57341 | opp_overlap 1013236 AATTTCTGCCAAAAA TGCCA TTC TGGCA GAATCTGCAACGCCA Pnuc_1015 1013843 - 1014469 + | hypothetical protein TERM 929 1014514 - 1014486 - T 95 -13.3 -3.75169 | opp_overlap 1014493 1014511, overlap 1014493 TAGCACCTTAGTAAA TAAAAAACGCCGT ATA ACGGCGTTTTTTC GTATCAATGAAATGA TERM 930 1014507 - 1014493 - T 100 -11.4 -5.68438 | opp_overlap 1014493, overlap 1014486 TTAGTAAATAAAAAA CGCCGT ATA ACGGCG TTTTTTCGTATCAAT TERM 931 1014493 - 1014507 + T 100 -11.4 -5.22312 | opp_overlap 1014486 1014493 TTAGTAAATAAAAAA CGCCGT ATA ACGGCG TTTTTTCGTATCAAT Pnuc_1016 1015020 - 1014538 - | hypothetical protein Pnuc_1017 1015496 - 1015020 - | transcription elongation factor GreA carB 1018818 - 1015555 - | carbamoyl phosphate synthase large subunit TERM 932 1017839 - 1017858 + g 75 -10 -3.53012 | TTTGCAGCAATTTTG GCGATTGG GAAC CCAGTCGC TTTAGAGGCCAAAGC Pnuc_1019 1020011 - 1018818 - | carbamoyl-phosphate synthase, small subunit TERM 933 1020233 - 1020191 - R 79 -11.5 -2.73619 | gap 1, opp_overlap 1020198, overlap 1020190 1020197 AATTAGCCTTTAAAG TGAGAAGT-CCACCCACAGC ACTG GCTATGAGTGGCAATTCTCA AAAAAGATGGCATGT Pnuc_1020 1022159 - 1020276 - | propionyl-CoA synthetase Pnuc_1021 1023627 - 1022194 - | lytic transglycosylase, catalytic TERM 934 1022220 - 1022254 + g 93 -10.8 -4.61527 | TGCTACCTCCCTTAC TGCTGGTTTTGCTGCT TGA AGTAGCCGAACTAGCA TTTTTCGCAGATTTT TERM 935 1022370 - 1022385 + g 70 -2.5 -5.06052 | gap 1 TGGAAGCTTTTACGG GCGCGC ATTTG GC-CGC TTTTGTGTTTTTTGC Pnuc_1022 1024436 - 1023627 - | hydroxyacylglutathione hydrolase Pnuc_1023 1024443 - 1025261 + | methyltransferase type 11 TERM 936 1025426 - 1025451 + G 80 -6.2 -4.8048 | opp_overlap 1025426 1025429 AAAGCTCACTACTAA TAACCGCATG GAAATA TGTGCGGTTA TTTTTGCTCTCAAAG Pnuc_1024 1025271 - 1025735 + | ribonuclease H TERM 937 1027081 - 1027063 - g 79 -7.4 -4.45664 | overlap 1027057 CGAAGGCAAGCAAAA CTTGCGTC CAG GAAGCAAG ATCCGTGAAGCGAAG Pnuc_1025 1025846 - 1027159 + | RND family efflux transporter MFP subunit Pnuc_1026 1027156 - 1030254 + | acriflavin resistance protein TERM 938 1030945 - 1030928 - g 93 -9.1 -4.90917 | opp_overlap 1030928 AAAGGCAAGTAAAAA GGACCCC GTAT GGAGTCC TTTGAACATAGCCAA Pnuc_1027 1030254 - 1030964 + | DNA polymerase III, epsilon subunit Pnuc_1028 1032111 - 1030978 - | tartrate dehydrogenase TERM 939 1032126 - 1032143 + r 70 -2.6 -5.09225 | opp_overlap 1032126, overlap 1032129 TTTTAGAGCAAAAAA CCTCAC GCTTAA GCGAGG TTTTTTACATAAACT TERM 940 1032143 - 1032126 - R 83 -4.8 -5.21709 | opp_overlap 1032126 1032129 TTTTAGAGCAAAAAA CCTCAC GCTTAA GCGAGG TTTTTTACATAAACT Pnuc_1029 1032978 - 1032214 - | hypothetical protein TERM 941 1033060 - 1033079 + r 86 -7.8 -4.87318 | opp_overlap 1033060 CTTGCGAAAAAAAAA CCACCCGG GTAT TTGGGTGG TTTTTGCGTTTTAGA TERM 942 1033079 - 1033060 - R 100 -6.4 -6.06723 | opp_overlap 1033060 CTTGCGAAAAAAAAA CCACCC GGGTATTT GGGTGG TTTTTGCGTTTTAGA Pnuc_1030 1033887 - 1033090 - | hypothetical protein TERM 943 1033637 - 1033673 + g 73 -2.4 -5.10154 | gap 2, opp_overlap 1033633, overlap 1033646 CATAAAGCAAACTCA CCCTGACATTGGGTAAGC CCC GTTTTTCCAA-GT-AGGG TTTTTGATTTTGGAT TERM 944 1033807 - 1033793 - G 79 -2.8 -5.30155 | TGAGCAACTAAAAAA GAGC CGTCTTT GCTC GAAGGGATATTGATA TERM 945 1034005 - 1033989 - R 84 -8.1 -4.74132 | ATACCGCACTAAAAA GGAATTT ATT AAATTCC GGTTAACTAATCGCT Pnuc_1031 1034670 - 1034008 - | hypothetical protein TERM 946 1034145 - 1034164 + g 74 -5.6 -4.57073 | CTTTGGGGCAAATCG GTGCGCCG TAAC TGGCCCAC TTTTTGAGCAAAGTC TERM 947 1035184 - 1035203 + G 81 -8.6 -4.54821 | overlap 1035173 GGATCCTCTAGCGGC TCAGCAGC AGCG GTTGCTGA TTTTATGGTTCCACT TERM 948 1036051 - 1036015 - g 71 -7.1 -4.08064 | overlap 1036016 AAGGCTTTTGCAAAA GCGCTGCCTGATCCCGT ATT ACGGGAGCAGGCGTAAC TCAGATCTTAATCAA Pnuc_1032 1034740 - 1036050 + | amidase Pnuc_1033 1037036 - 1036059 - | hypothetical protein TERM 949 1036086 - 1036112 + g 91 -6.7 -5.52384 | gap 1, overlap 1036088 AATGTGCGCTGATTT GA-TTGCCTTGC TCCA GTAAGGCAACTC TTTTTTTACTAAAGC TERM 950 1036088 - 1036109 + g 71 -9.5 -3.23247 | overlap 1036086 TGTGCGCTGATTTGA TTGCCTTGC TCCA GTAAGGCAA CTCTTTTTTTACTAA TERM 951 1036924 - 1036904 - G 74 -10.5 -3.18582 | overlap 1036908 GAGCTGATGTATCAA CCAATCCTC CAG GAGGATTAG GCACAACCAAAACAA Pnuc_1034 1038208 - 1037087 - | NADH:flavin oxidoreductase/NADH oxidase TERM 952 1038265 - 1038254 - H 81 -5.8 -5.14894 | AAAAAAGCACAAAAA GCTC TATA GAGC TAAAATGAATAAAAA TERM 953 1039466 - 1039479 + G 72 -6.7 -4.20768 | overlap 1039471 GCTTAAAGGTGCCTG GCCAT GAAG ATGGC TTCTTTATTGGCGGT Pnuc_1035 1038370 - 1039890 + | methylmalonate-semialdehyde dehydrogenase TERM 954 1039906 - 1039935 + T 88 -10.9 -4.08317 | opp_overlap 1039906 1039913, overlap 1039913 ATTGGCAGTGCAAGA GAAAAAAGCGATC TTCG GATCGCTTTTTTA TTTACTTTGAACTTC TERM 955 1039935 - 1039906 - T 78 -10.9 -3.05963 | opp_overlap 1039906 1039913, overlap 1039913 ATTGGCAGTGCAAGA GAAAAAAGCGATC TTCG GATCGCTTTTTTA TTTACTTTGAACTTC TERM 956 1039928 - 1039913 - T 95 -9 -5.47159 | opp_overlap 1039906 1039913, overlap 1039906 GTGCAAGAGAAAAAA GCGATC TTCG GATCGC TTTTTTATTTACTTT TERM 957 1039913 - 1039928 + T 100 -9 -5.74086 | opp_overlap 1039913 1039906, overlap 1039906 GTGCAAGAGAAAAAA GCGATC TTCG GATCGC TTTTTTATTTACTTT Pnuc_1036 1040447 - 1039956 - | hypothetical protein Pnuc_1037 1041112 - 1040513 - | NUDIX hydrolase TERM 958 1041213 - 1041190 - R 95 -11.8 -4.17048 | opp_overlap 1041194, overlap 1041194 GCGCCGTCAAAACAA TAAAGGCCCC TAAC GGAGCCTTTA TACAGTAGATACCAC TERM 959 1041209 - 1041194 - R 84 -8.2 -4.67697 | opp_overlap 1041194, overlap 1041190 CGTCAAAACAATAAA GGCCCC TAAC GGAGCC TTTATACAGTAGATA Pnuc_1038 1042733 - 1041234 - | proton-translocating NADH-quinone oxidoreductase, chain N Pnuc_1039 1044210 - 1042744 - | proton-translocating NADH-quinone oxidoreductase, chain M Pnuc_1040 1046292 - 1044235 - | proton-translocating NADH-quinone oxidoreductase, chain L TERM 960 1045020 - 1045010 - G 77 -6.8 -4.4959 | GCGAAGTAAGCAAAA CCAG ATC CTGG AATATCACTTGCAGC Pnuc_1041 1046603 - 1046295 - | NADH-ubiquinone oxidoreductase, chain 4L Pnuc_1042 1047247 - 1046600 - | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 Pnuc_1043 1047759 - 1047268 - | NADH dehydrogenase subunit I Pnuc_1044 1048844 - 1047771 - | respiratory-chain NADH dehydrogenase, subunit 1 Pnuc_1045 1051168 - 1048853 - | NADH-quinone oxidoreductase, chain G Pnuc_1046 1052498 - 1051200 - | NADH-quinone oxidoreductase, F subunit Pnuc_1047 1053001 - 1052495 - | NADH-quinone oxidoreductase, E subunit Pnuc_1048 1054278 - 1053025 - | NADH dehydrogenase subunit D Pnuc_1049 1054881 - 1054282 - | NADH (or F420H2) dehydrogenase, subunit C Pnuc_1050 1055367 - 1054885 - | NADH-quinone oxidoreductase, B subunit Pnuc_1051 1055732 - 1055373 - | NADH dehydrogenase subunit A Pnuc_1052 1056356 - 1056012 - | preprotein translocase, SecG subunit Pnuc_1053 1057137 - 1056379 - | Triose-phosphate isomerase Pnuc_1054 1058152 - 1057154 - | alcohol dehydrogenase TERM 961 1058086 - 1058067 - G 79 -11.4 -3.42346 | opp_overlap 1058056 1058054 AAGACCTCACCAGAA CCAGCCGC TGGA GCGGCTAG GTCAGGACGGGTGTT Pnuc_1055 1060351 - 1058183 - | polynucleotide phosphorylase/polyadenylase TERM 962 1060434 - 1060416 - R 74 -6 -4.36914 | TGTCGTGGGATAAAA CAGTGTCA CGA CAACACTG GAGCGTTTTAGGATC TERM 963 1060603 - 1060547 - R 85 -6.8 -5.03145 | gap 1, opp_overlap 1060549, overlap 1060549 GAAGCGCCCAAAAAA CATGCCATCT-GCTTAAGACTGATTCT GTGA AGAAACAACCCTAAGATAGATGGCATT GCATTACCGATAAGA TERM 964 1060601 - 1060549 - R 89 -9.4 -4.13963 | gap 1, opp_overlap 1060549, overlap 1060547 AGCGCCCAAAAAACA TGCCATCT-GCTTAAGACTGATTCT GTGA AGAAACAACCCTAAGATAGATGGCA TTGCATTACCGATAA Pnuc_1056 1060889 - 1060620 - | ribosomal protein S15 TERM 965 1060975 - 1060959 - H 78 -3 -5.5112 | GTTATTAACAAAAAA GCTTTA CAAAT CAAAGC CATCGAATTATAGCA Pnuc_1057 1061098 - 1061691 + | putative lipoprotein Pnuc_1058 1063265 - 1061718 - | 2-isopropylmalate synthase TERM 966 1063335 - 1063355 + r 77 -11.1 -2.79209 | opp_overlap 1063336, overlap 1063332 1063330 AATCTAAAAACAAAA ACCCCAGCA ATG TGCTGGGGC TGGTATTGGTGGTTA TERM 967 1063354 - 1063336 - R 100 -14.6 -5.63236 | opp_overlap 1063335 1063332 1063330 ATCTAAAAACAAAAA CCCCAGCA ATG TGCTGGGG CTGGTATTGGTGGTT Pnuc_1059 1064360 - 1063500 - | CDP-diacylglycerol--serine O-phosphatidyltransferase Pnuc_1060 1065030 - 1064383 - | phosphatidylserine decarboxylase TERM 968 1064774 - 1064760 - G 73 -4.2 -4.90455 | ATACATTCATAAAAA CGCTAA TTT TGAGCG CTTCACGATCCGCAT TERM 969 1064780 - 1064797 + g 85 -7 -5.04249 | opp_overlap 1064793 ATTTTGAGCGCTTCA CGATCC GCATAA GGATCG TTTGTTTTTTCCACA Pnuc_1061 1066086 - 1065070 - | ketol-acid reductoisomerase TERM 970 1065491 - 1065527 + g 71 -6.8 -4.15222 | opp_overlap 1065498, overlap 1065498 1065501 TCAACAGCGCCACCA CAGAGAACTG-CTTGTTC ACC GAACAAGTCAGTT-TCAG TTTCTTCGCGGAAGT TERM 971 1065498 - 1065521 + g 77 -9 -3.93262 | gap 1, opp_overlap 1065498, overlap 1065491 1065501 CGCCACCACAGAGAA CTG-CTTGTTC ACC GAACAAGTCAG TTTCAGTTTCTTCGC TERM 972 1065521 - 1065498 - G 72 -9 -3.61902 | gap 1, opp_overlap 1065491 1065498 1065501 CGCCACCACAGAGAA CTG-CTTGTTC ACC GAACAAGTCAG TTTCAGTTTCTTCGC TERM 973 1065531 - 1065541 + g 72 -5.4 -4.47183 | AGTCAGTTTCAGTTT CTTC GCG GAAG TTTGTTTCGATAATG ilvH 1066629 - 1066138 - | acetolactate synthase 3 regulatory subunit Pnuc_1063 1068416 - 1066629 - | acetolactate synthase, large subunit, biosynthetic type Pnuc_1064 1068610 - 1069179 + | ECF subfamily RNA polymerase sigma-24 factor Pnuc_1065 1069176 - 1069643 + | putative transmembrane protein Pnuc_1066 1069664 - 1070293 + | hypothetical protein Pnuc_1067 1070312 - 1070848 + | RDD domain-containing protein Pnuc_1068 1073364 - 1070866 - | hypothetical protein TERM 974 1072249 - 1072239 - G 77 -6.8 -4.37711 | TCACCAAACTCAAAA TGGG GGG CCCA GCAAAAGCCAATAAT TERM 975 1072399 - 1072424 + g 79 -9.7 -3.72485 | gap 1, opp_overlap 1072389, overlap 1072402 1072408 AGAACCTATCACTGC CGCGACT-GCGC CAA GCGCTAGTAGCG TTTGAGCTTGTCTTT TERM 976 1072408 - 1072431 + g 76 -8.2 -4.08349 | gap 1, opp_overlap 1072389, overlap 1072399 1072402 CACTGCCGCGACTGC GC-CAAGCGCT AGT AGCGTTTGAGC TTGTCTTTTTAAAAT TERM 977 1072602 - 1072621 + g 76 -7.8 -4.26079 | CTCTATCTAAAGTTT TGCGCATC GTTG GCTGCGCA TTTTCAATAGTTTCA Pnuc_1069 1074146 - 1073361 - | short-chain dehydrogenase/reductase SDR Pnuc_1070 1075192 - 1074194 - | hypothetical protein Pnuc_1071 1075820 - 1075194 - | hypothetical protein Pnuc_1072 1076746 - 1075817 - | hypothetical protein Pnuc_1073 1077519 - 1076743 - | ABC transporter related TERM 978 1077040 - 1077060 + g 80 -6.8 -4.65895 | gap 1 AGGATCTAAGGCCAT CGCGC-GTG CAAT CGCTGCGCG TTTTTGCATGCCGCC Pnuc_1074 1078700 - 1077519 - | hypothetical protein TERM 979 1078778 - 1078755 - H 100 -13.2 -5.0925 | TGCTAAAAGTAAAAA GGGCCCAGTT TTTC AACTAGGCCC CATATGAGTTGGTGC Pnuc_1075 1078883 - 1079383 + | transcription elongation factor GreB Pnuc_1076 1081720 - 1079396 - | (p)ppGpp synthetase I, SpoT/RelA TERM 980 1081443 - 1081457 + g 70 -10 -3.06492 | TGAGTGATGTAAGGC TCGCCA CTA TGGCGA TATTGGCCTAAATGC Pnuc_1077 1082014 - 1081811 - | DNA-directed RNA polymerase subunit omega TERM 981 1082071 - 1082085 + r 72 -10 -2.52543 | TGATTAGACCCCGAG GCGCTT CAA AAGCGC TGGATTACGGGCCAT Pnuc_1078 1082697 - 1082059 - | guanylate kinase Pnuc_1079 1083643 - 1082714 - | hypothetical protein Pnuc_1080 1083700 - 1084440 + | ribonuclease PH Pnuc_1081 1084453 - 1085043 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Pnuc_1082 1085036 - 1086214 + | putative oxygen-independent coproporphyrinogen III oxidase Pnuc_1083 1086256 - 1087269 + | hypothetical protein TERM 982 1087279 - 1087309 + T 73 -9.9 -3.16742 | opp_overlap 1087279 1087283, overlap 1087283 AACTAAAACAGAAAA TAAATAAGGCTCC AAACA GGAACCTTATTTA TTGATGCAGATTGGA TERM 983 1087309 - 1087279 - T 100 -12.1 -4.93333 | opp_overlap 1087279 1087283, overlap 1087283 AACTAAAACAGAAAA TAAATAAGGCTCC AAACA GGAACCTTATTTA TTGATGCAGATTGGA TERM 984 1087305 - 1087283 - T 90 -8.5 -4.93812 | opp_overlap 1087279 1087283, overlap 1087279 AAAACAGAAAATAAA TAAGGCTCC AAACA GGAACCTTA TTTATTGATGCAGAT TERM 985 1087283 - 1087305 + T 71 -6.3 -4.2461 | opp_overlap 1087283 1087279, overlap 1087279 AAAACAGAAAATAAA TAAGGCTCC AAACA GGAACCTTA TTTATTGATGCAGAT Pnuc_1084 1089442 - 1087337 - | beta-lactamase domain-containing protein Pnuc_1085 1090996 - 1089554 - | integral membrane sensor signal transduction histidine kinase TERM 986 1090961 - 1090942 - G 76 -4.3 -4.91429 | gap 1, overlap 1090943 AAATCCCAAAGAAAA GGCCCATC TGAAT GATGG-CC AAGATAAAGAAATAA TERM 987 1091978 - 1091954 - g 72 -10.7 -2.92701 | overlap 1091951 AAAGCAAACGAATTA GGCATTAAGCG CCG CGCTAAACGCC AGGTGTACATTATCC Pnuc_1086 1091099 - 1092334 + | patatin TERM 988 1092990 - 1092968 - g 72 -2.7 -5.04987 | gap 1 AATACTGCTAAAAAA GGGTG-TGCT AACT AGCAGCAGCC AAATTAAGTTAAGGG Pnuc_1087 1092378 - 1093295 + | hypothetical protein TERM 989 1093393 - 1093426 + T 100 -14 -5.24531 | opp_overlap 1093393 TCTGTAACCTGAAAA TGTATAACCCCAGC CAATGC GCCGGGGTTATACA TTTTTTGTAAACGAT TERM 990 1093426 - 1093393 - T 100 -16.2 -4.19238 | opp_overlap 1093393 TCTGTAACCTGAAAA TGTATAACCCCAGC CAATGC GCCGGGGTTATACA TTTTTTGTAAACGAT Pnuc_1088 1095065 - 1093464 - | thiamine pyrophosphate binding domain-containing protein TERM 991 1095229 - 1095208 - R 100 -11.6 -5.86976 | opp_overlap 1095208 GTATAAAACAAAAAA CCCCATGC TTAAGG GCATGGGG TTTTTGTTAGTAAAT TERM 992 1095208 - 1095229 + r 100 -12.3 -5.14163 | opp_overlap 1095208 GTATAAAACAAAAAA CCCCATGCT TAAG GGCATGGGG TTTTTGTTAGTAAAT Pnuc_1089 1095674 - 1095273 - | hypothetical protein TERM 993 1095977 - 1095989 + r 70 -7.7 -3.76815 | TCGAAGTAGCTCTTT GATCG ACA CGATC TTTGAGATTTTGAGT TERM 994 1096148 - 1096165 + r 76 -6.9 -4.41844 | opp_overlap 1096148 GCTAGGAATAAAAAA GCCACCC CGGA GGATGGC TTTTGTGAAGATTTT TERM 995 1096165 - 1096148 - R 95 -9.1 -5.5112 | opp_overlap 1096148 GCTAGGAATAAAAAA GCCACCC CGGA GGATGGC TTTTGTGAAGATTTT Pnuc_1090 1097490 - 1096354 - | FAD dependent oxidoreductase TERM 996 1097373 - 1097383 + g 77 -6.8 -4.45083 | GGGCGCTGCTGATGG TGCC AAA GGCA TTTTCTCGCTCTAGC TERM 997 1097793 - 1097777 - g 82 -11.5 -3.58269 | opp_overlap 1097787 GAAGCTATTTGCAAA CGCCCGC TCA GCAGGCG TCCCTGAATTTATTA Pnuc_1091 1097628 - 1099160 + | glucose-6-phosphate isomerase Pnuc_1092 1099221 - 1100606 + | phosphomannomutase Pnuc_1093 1100908 - 1100612 - | hypothetical protein TERM 998 1100687 - 1100663 - G 75 -11.4 -3.07994 | opp_overlap 1100660 1100681 GCTAACTCCATGTAA TGCGCTAGCC TGCTG GGCTTGCGCA AAGTGTTGGATCACG Pnuc_1094 1102648 - 1100933 - | polypeptide-transport-associated domain-containing protein TERM 999 1101780 - 1101750 - G 71 -9.6 -3.17527 | opp_overlap 1101751, overlap 1101748 1101751 TATGCACCACTAACA CCGGTTGTCCAGGC CGA GCCTGCACCACCGT TATAGGCATAGTTAC TERM 1000 1101751 - 1101779 + g 86 -13.1 -3.32268 | opp_overlap 1101751 1101750 1101748 ATGCACCACTAACAC CGGTTGTCCAGGC CGA GCCTGCACCACCG TTATAGGCATAGTTA TERM 1001 1101779 - 1101751 - G 80 -13.1 -2.50195 | opp_overlap 1101751, overlap 1101750 1101748 ATGCACCACTAACAC CGGTTGTCCAGGC CGA GCCTGCACCACCG TTATAGGCATAGTTA Pnuc_1095 1134161 - 1102872 - | outer membrane autotransporter TERM 1002 1104559 - 1104580 + g 74 -10.8 -3.21924 | overlap 1104557 TTGATACCTATATTG GCGGCGCC CAATAA GGTGCCGC TGTTATCAACGGTAA TERM 1003 1105335 - 1105312 - G 72 -10.4 -2.85545 | overlap 1105309 1105314 CCGCCAACAACAGTA GAGTTTGTTG AGAC CAACAAACCC GTGCGATTACCTGAG TERM 1004 1123510 - 1123492 - G 71 -10.3 -2.66787 | overlap 1123483 1123481 CCAACAGCGATACCA GCGGCAT TCATC ATGCCGC TGCCATAGATCAATC TERM 1005 1127116 - 1127131 + g 73 -10.4 -3.03624 | opp_overlap 1127113, overlap 1127113 ATACCATAAGCACCA CCGGCA ATCG TGCCGG TACTTTGATTGATGA TERM 1006 1127788 - 1127778 - G 70 -2.4 -5.05782 | opp_overlap 1127786, overlap 1127779 AGTCACCCCAAAAAA GCGG CCG CCGT CAGCAGTAGCAACAC TERM 1007 1133786 - 1133802 + g 72 -8.7 -3.76839 | CAGCATTGTTAATGT TGCCACT TAA GGTGGCA TTTGAATTAACCTTG TERM 1008 1134259 - 1134234 - R 78 -2.6 -5.39221 | opp_overlap 1134240, overlap 1134226 ATAAGAACGAAAAAA TCCACACCAT ATAATA ATGGTATTGA TACTTTTCGTAAATA TERM 1009 1134365 - 1134344 - R 77 -8.7 -3.93061 | opp_overlap 1134344 ACCCCAAAAGTTAAA GGCGGGATT GTTT AATCCCGTC TTTTTTACTATTTCA TERM 1010 1134344 - 1134365 + r 100 -10.9 -5.32699 | opp_overlap 1134344 ACCCCAAAAGTTAAA GGCGGGATT GTTT AATCCCGTC TTTTTTACTATTTCA TERM 1011 1134380 - 1134396 + r 73 -7.9 -3.91716 | overlap 1134381 CTTTTTTACTATTTC ACCGGGA TAT TCCCGGG TTCTTTGCCCAATGC TERM 1012 1134381 - 1134395 + r 81 -11.4 -2.94708 | overlap 1134380 TTTTTTACTATTTCA CCGGGA TAT TCCCGG GTTCTTTGCCCAATG Pnuc_1096 1139667 - 1134373 - | sulfotransferase TERM 1013 1134648 - 1134624 - G 70 -10.1 -3.05384 | opp_overlap 1134623 1134621, overlap 1134635 TGTCTTCGTACTGAA CTTCCAGAAAA CTT CCTTCTGGAAG AACTTTTCTCCAATG TERM 1014 1134648 - 1134635 - G 75 -6.7 -4.4017 | opp_overlap 1134623 1134621, overlap 1134624 TGAACTTCCAGAAAA CTTCC TTCT GGAAG AACTTTTCTCCAATG TERM 1015 1136512 - 1136526 + g 72 -2.8 -5.08824 | overlap 1136503 1136509 CAAGGCCGCATTTTG CGTATT CGC AATCCG TTTTTTGGCTGGCAC TERM 1016 1136851 - 1136874 + g 71 -3.7 -4.85599 | TGAGTCGGGAAGTTG TGGTCGCCC TTCTTC GGGGGCCCA TTTTTGTAAACTCAC TERM 1017 1138272 - 1138253 - G 81 -3.6 -5.3798 | gap 1 GAATAACAAGAAAAA CATGAATCC ATC GGAT-CACG CATTGCATTAATAAT TERM 1018 1139164 - 1139176 + g 70 -9.1 -3.31157 | CAGCGCTTTTTTGTA GGCTG CAA CAGCC TTGGTATAGTCCTTC Pnuc_1097 1139797 - 1141014 + | hypothetical protein Pnuc_1098 1141836 - 1141042 - | FkbM family methyltransferase Pnuc_1099 1142424 - 1141837 - | adenylyl-sulfate kinase TERM 1019 1142368 - 1142353 - G 79 -7.6 -4.54727 | opp_overlap 1142367 GCCTGTAAACCAAAA GCATAG CGGT CTATGC CCATTAGCCAGGGCT Pnuc_1100 1143183 - 1142449 - | peptidase M48, Ste24p TERM 1020 1142733 - 1142723 - G 86 -3.2 -5.64274 | TTACCTACAAAAAAA CCAC TAA ATGG CACAAAGTAGCTAGC Pnuc_1101 1143478 - 1144140 + | hypothetical protein Pnuc_1102 1144190 - 1144891 + | hypothetical protein Pnuc_1103 1144985 - 1146112 + | quinolinate synthetase TERM 1021 1146700 - 1146690 - g 72 -5.4 -4.54821 | opp_overlap 1146690, overlap 1146685 AGGTCAAGGACAAAA CCAA CGT TTGG CTTTATGGCACGGCA Pnuc_1104 1146208 - 1147065 + | nicotinate-nucleotide pyrophosphorylase Pnuc_1105 1148452 - 1147073 - | TRAP transporter solute receptor TAXI family protein TERM 1022 1147427 - 1147407 - G 72 -10.5 -2.91395 | opp_overlap 1147407, overlap 1147406 ATCCGCTCTAGAAAC TCTGCCATC CAA AATGGCAGA TACTTCATTAGCACC Pnuc_1106 1150176 - 1148518 - | L-aspartate oxidase TERM 1023 1150075 - 1150061 - G 71 -10 -3.12521 | overlap 1150059 1150056 GCCATCAAAATGACA GGCTGA GTT TCAGCC ATGTGCAAGGCGACA Pnuc_1107 1150788 - 1150447 - | transcriptional modulator of MazE/toxin, MazF Pnuc_1108 1151030 - 1150788 - | transcriptional regulator/antitoxin, MazE TERM 1024 1151118 - 1151100 - R 100 -9.5 -5.27938 | AGCCGCAAATAAAAA CCCCGCC ATTAA GACGGGG TTCGAAGGGTTTTTC Pnuc_1109 1154068 - 1151177 - | formate dehydrogenase, alpha subunit TERM 1025 1151886 - 1151914 + g 70 -2.3 -5.07107 | overlap 1151890 1151895 ATGATCCATAGATCT GGCTTTGCATCTC CAG GAGGTTCAATGGC TTTTTTACCCATTTG TERM 1026 1152249 - 1152261 + g 71 -7.7 -3.84246 | overlap 1152255 CAAGCATGCGCCTGT GGGTT ATC AACCC TTTGATAGTTCGGGA TERM 1027 1152559 - 1152575 + g 75 -9.5 -3.6279 | ACCCCTTGATATTTT CTTTGAG TGC CTCAAAG TTATTAGAGCGATTT TERM 1028 1153936 - 1153918 - G 70 -10.4 -2.57132 | overlap 1153917 1153920 CGTCTGGGCGATAAC CATCTTTG AAG CAAAGATG CGGAATATCAATACC Pnuc_1110 1155909 - 1154107 - | NADH dehydrogenase (quinone) TERM 1029 1154755 - 1154770 + g 74 -10.4 -3.19936 | opp_overlap 1154744 GTAAGGTGGACGCAT GCGTGG TTCA CCACGC TTACCTTCAATACTT TERM 1030 1155004 - 1154993 - G 76 -4.4 -5.01732 | opp_overlap 1155000, overlap 1154996 AAGCCTTCTAAAAAA CGAT GCGG ATCG CGCTCTAAGTAAGTG TERM 1031 1155641 - 1155655 + g 79 -10 -3.81954 | opp_overlap 1155639 GCGACTTCATACACC TCTGCC ATC GGCAGA TTCATTTCTTTTGCA TERM 1032 1155709 - 1155683 - G 71 -8 -4.00469 | opp_overlap 1155687 1155689, overlap 1155701 GCAAGAGCAACTAAA TGACGATCGTGC AAC GCACGATATTCA TCGTTCAGCTTATGA TERM 1033 1155689 - 1155703 + g 71 -10 -3.20227 | opp_overlap 1155683 1155701, overlap 1155687 GCAACTAAATGACGA TCGTGC AAC GCACGA TATTCATCGTTCAGC Pnuc_1111 1158714 - 1156294 - | hypothetical protein TERM 1034 1156320 - 1156332 + g 76 -9.1 -3.67792 | TGAGCTCAACATCGA GAGGG ACG CCCTC TTTGCCTGCCTCTAC TERM 1035 1157369 - 1157394 + g 72 -8.5 -3.66178 | gap 1 CTAACGCCTATTAGG GTGG-CATTAAA TTT TTTAATGTCCAC TTTGAAATTGGGGCG TERM 1036 1159114 - 1159100 - g 72 -2.8 -5.09173 | opp_overlap 1159100, overlap 1159102 CAAGATCCCAAAAAA GTTACT CAA AGTACC TGTTATGAAATCAAT Pnuc_1112 1158794 - 1159387 + | hypothetical protein TERM 1037 1159409 - 1159380 - T 74 -6.5 -4.3467 | overlap 1159407 1159408 AGGTGCAGATTAAAA CGCTTTGAGTT ACACAAAA ATCTCAAAGCG ATCACCGCAGGCGAT Pnuc_1113 1159736 - 1159389 - | hypothetical protein TERM 1038 1159416 - 1159446 + g 72 -6.1 -4.3208 | gap 1, opp_overlap 1159407 1159411 1159408 CTCAAAGCGATCACC GCAGGCGATAGGCA TTAA TGCCC-TCTCCTGC TTTTCCATTCTGACC Pnuc_1114 1160095 - 1159733 - | hypothetical protein TERM 1039 1159872 - 1159885 + g 71 -3.8 -4.8622 | TATGGCAATCTTCTT CCTG AATAAG CAGG TTTTTGCTTCACAGA Pnuc_1115 1160467 - 1160162 - | YciI-like protein TERM 1040 1160548 - 1160530 - H 100 -13.2 -5.27938 | opp_overlap 1160530 ATCCCCAAAGAAAAA GCCACCAA AGT TTGGTGGC TTAGTACATCTTGGC TERM 1041 1160530 - 1160548 + H 91 -13.2 -3.2218 | opp_overlap 1160530 ATCCCCAAAGAAAAA GCCACCAA AGT TTGGTGGC TTAGTACATCTTGGC TERM 1042 1161940 - 1161910 - g 90 -9.7 -4.49316 | ACCATTAAGAATAAA GCTGAGGCTGCCT ATAGA AGGCAGGATCAGC TGGAGAAACGCACAG Pnuc_1116 1160734 - 1162038 + | phage integrase family protein Pnuc_1117 1162755 - 1162012 - | hypothetical protein Pnuc_1118 1163854 - 1162748 - | SMC domain-containing protein TERM 1043 1163952 - 1163906 - R 100 -21.3 -3.73224 | opp_overlap 1163893 1163908, overlap 1163908 TCACTTTGGAGCAAA GATTGTATCAGTCATCCGTAA TTTTT TTACGGATGACTGATACAATT ATTTAATCCTTAATA TERM 1044 1163908 - 1163950 + r 100 -23.9 -4.04927 | opp_overlap 1163906 1163908 ACTTTGGAGCAAAGA TTGTATCAGTCATCCGTAA TTTTT TTACGGATGACTGATACAA TTATTTAATCCTTAA TERM 1045 1163950 - 1163908 - R 100 -23.9 -3.45027 | opp_overlap 1163908, overlap 1163906 ACTTTGGAGCAAAGA TTGTATCAGTCATCCGTAA TTTTT TTACGGATGACTGATACAA TTATTTAATCCTTAA Pnuc_1119 1164849 - 1164316 - | hypothetical protein Pnuc_1120 1165427 - 1165044 - | hypothetical protein Pnuc_1121 1166485 - 1165439 - | hypothetical protein TERM 1046 1166035 - 1166002 - G 77 -10.9 -3.19668 | gap 1, opp_overlap 1166001 1165999, overlap 1166005 GACTATCTAAGCCAA CTACCGCATCGGCGCC GTG GGAGCCGTCGCGGT-G AAGTTCTAGGTCTAA TERM 1047 1166033 - 1166005 - G 84 -13.7 -2.79188 | opp_overlap 1166001 1165999, overlap 1166002 TATCTAAGCCAACTA CCGCATCGGCGCC GTG GGAGCCGTCGCGG TGAAGTTCTAGGTCT TERM 1048 1167451 - 1167469 + G 71 -3.9 -4.88918 | gap 1, opp_overlap 1167437, overlap 1167446 1167454 AGAGCGGATGTTGAT GCACTCAA TACC TTGAG-GC TTTTCTTTGAAATCC Pnuc_1122 1166935 - 1167540 + | exonuclease, RNase T and DNA polymerase III TERM 1049 1168699 - 1168686 - g 70 -2.4 -4.96848 | overlap 1168663 1168661 TCGCCCAGATAAAAA TCCA GGCGAA TGGA AAGAGCAAAGTAACC Pnuc_1123 1167652 - 1169151 + | filamentation induced by cAMP protein Fic TERM 1050 1169232 - 1169256 + T 72 -10.1 -2.72049 | overlap 1169234 AGACATTTATGTCTA CATGCCACT AGTTTTA AGTGGCATG TAATTCACAGCTATC Pnuc_1124 1170452 - 1169271 - | hypothetical protein Pnuc_1125 1172415 - 1170454 - | hypothetical protein Pnuc_1126 1173879 - 1173031 - | hypothetical protein Pnuc_1127 1173962 - 1174414 + | hypothetical protein Pnuc_1128 1175782 - 1174448 - | hypothetical protein TERM 1051 1174816 - 1174832 + g 73 -4.3 -4.90906 | overlap 1174806 1174807 1174829 CATAGCCAAGACGTT GGTCGTG TAT CTCGATC TTTTTGATCTTCTCC Pnuc_1129 1176256 - 1175786 - | hypothetical protein Pnuc_1130 1177405 - 1176473 - | hypothetical protein TERM 1052 1177042 - 1177011 - G 100 -17.4 -3.14132 | opp_overlap 1177007 1177006 1177004 GTGTCTGGTGAGCAA TGCGTTCGCATTGC GGTC GCATTGCGAACGCA TCCAATATTTGGTGA Pnuc_1131 1177951 - 1178160 + | phage transcriptional regulator, AlpA Pnuc_1132 1179858 - 1178188 - | restriction modification system DNA specificity subunit TERM 1053 1178300 - 1178310 + g 78 -5.4 -4.7497 | opp_overlap 1178283, overlap 1178283 AATCTTTTTAGACTT GCTA CTA TAGC TTTTTGCTCACTCAG TERM 1054 1179102 - 1179112 + g 74 -5.4 -4.57569 | TAACTAAGTTATCGT GGAA TAT TTCC TTTTTAAGCGCATCC Pnuc_1133 1181348 - 1179876 - | N-6 DNA methylase Pnuc_1134 1183730 - 1181388 - | EcoEI R domain-containing protein TERM 1055 1183814 - 1183830 + H 73 -8 -3.87815 | opp_overlap 1183814 AGGGTTTGCATACCA GGCTCA CTATC TGAGCC TTTATAGGCATACAC Pnuc_1135 1183873 - 1184175 + | hypothetical protein Pnuc_1136 1185330 - 1184326 - | hypothetical protein TERM 1056 1185121 - 1185136 + g 80 -6.8 -4.57073 | GGCCAAATCAAATTG CCACTC AGCT GGGTGG TTTTTAGCCAGCATC Pnuc_1137 1186194 - 1185331 - | hypothetical protein TERM 1057 1186921 - 1186901 - R 93 -9.7 -4.85782 | overlap 1186885 GCCCTCAAAAAGAAA GAGCCCC ATGGATA GGGGCTC TCAGGGTGCTACTGG Pnuc_1138 1189056 - 1187083 - | acetate--CoA ligase Pnuc_1139 1189234 - 1190757 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 1058 1190800 - 1190845 + G 74 -10.5 -3.14463 | gap 1 ATCGGGGTTTTTGAT TCTGGCGTAGGAGGCTTGTCCA TCT TGGATGAGGCT-CTGCGCCAGC TTCCTGAAAACGATT Pnuc_1140 1190776 - 1191582 + | glutamate racemase Pnuc_1141 1191579 - 1192283 + | TonB family protein Pnuc_1142 1192289 - 1192981 + | MotA/TolQ/ExbB proton channel Pnuc_1143 1192984 - 1193397 + | biopolymer transport protein ExbD/TolR Pnuc_1144 1193877 - 1193413 - | hypothetical protein TERM 1059 1193823 - 1193796 - G 78 -5.7 -4.73635 | gap 2, opp_overlap 1193798 1193801, overlap 1193797 1193799 1193801 GACAATCGAATAAAA GCATATCTGCTGC CTGA GCAGCAG--ATGC TATCGTCATCATAAG TERM 1060 1193822 - 1193799 - G 71 -9.6 -3.27212 | opp_overlap 1193798 1193801, overlap 1193796 1193797 1193801 AATCGAATAAAAGCA TATCTGCTGC CTGA GCAGCAGATG CTATCGTCATCATAA TERM 1061 1193820 - 1193801 - G 81 -12.2 -3.18634 | opp_overlap 1193801 1193798, overlap 1193799 1193796 1193797 TCGAATAAAAGCATA TCTGCTGC CTGA GCAGCAGA TGCTATCGTCATCAT TERM 1062 1193801 - 1193820 + g 78 -12.2 -2.67694 | opp_overlap 1193799 1193796 1193797 1193801, overlap 1193798 TCGAATAAAAGCATA TCTGCTGC CTGA GCAGCAGA TGCTATCGTCATCAT Pnuc_1145 1195106 - 1193916 - | TRAP-type uncharacterized transport system periplasmic component-like protein TERM 1063 1194482 - 1194469 - G 75 -3.1 -5.26875 | TTTTGAACTAAAAAA TCAAC CACC GCTGA AGGAGCATACGAAAT Pnuc_1146 1195957 - 1195118 - | phosphate ABC transporter, phosphate-binding protein Pnuc_1147 1196745 - 1195954 - | phosphate binding protein Pnuc_1148 1197522 - 1196749 - | hypothetical protein TERM 1064 1197498 - 1197481 - G 73 -9.9 -3.46913 | ACACATAATGCATAA CCCAATG ACAA CATTGGG CAGCGAGTGGAGGTA Pnuc_1149 1204227 - 1197574 - | filamentous haemagglutinin outer membrane protein TERM 1065 1198704 - 1198694 - G 82 -6.8 -4.84359 | TTACCGCCATAAAAA GCAG TCC CTGC CACTCTTGCTAAGTC TERM 1066 1201363 - 1201353 - G 75 -3.2 -5.21709 | TGTTAGACCAAAAAA TGAC ATC GCCA CCATTGGTCAAATAG TERM 1067 1201896 - 1201868 - G 72 -3.1 -4.96848 | opp_overlap 1201868 GTCGCCATAGAAAAA GGCAATGAACC GTTACTA GCGTCATTGCC TATTAATATTGTGCC TERM 1068 1202067 - 1202089 + g 73 -7.6 -4.02108 | overlap 1202068 GGGTAGTGATCGTGA TGGCGCCACC ATC GGTAGTGCCG TTTGCTTGTAATGCC TERM 1069 1204215 - 1204201 - G 80 -6.4 -4.89838 | GCAAGAAAGAGAAAA GGAAGA TTG CCTTCC GATGCTATTCACCAA TERM 1070 1204323 - 1204304 - H 71 -7.2 -3.93057 | overlap 1204296 1204307 TCGAAAATGAGGAAA TAAGCCCT CAAA AAGGCTTA GGATGCGGTTTTCGC TERM 1071 1204393 - 1204413 + H 73 -10.5 -2.90714 | overlap 1204374 1204395 ACGACTTTTTTGAGT CGGCAGATT TTA AATCTGCTG TGTCTACCGATTTCA TERM 1072 1204395 - 1204411 + H 72 -9.5 -3.00215 | overlap 1204374 1204393 GACTTTTTTGAGTCG GCAGATT TTA AATCTGC TGTGTCTACCGATTT Pnuc_1150 1204571 - 1207030 + | penicillin amidase TERM 1073 1207043 - 1207028 - f 74 -6.2 -4.36343 | GAATTAATGAATAAA TAAGCT TTGT AGCTTA GGGTGTTTAAAATAA Pnuc_1151 1207096 - 1207506 + | hypothetical protein TERM 1074 1207524 - 1207543 + G 71 -3.6 -4.77757 | CCCTCAAGTAATGCG GCCAAA GTTCTGGA TTTGGC TTTTCATTTTTACAG TERM 1075 1207590 - 1207576 - g 82 -11.4 -3.51924 | opp_overlap 1207558 CCCTTAGCGACACAA GGGTGC TTT GCACCC CTAGCCGCACTAGGT Pnuc_1152 1207519 - 1207887 + | hypothetical protein TERM 1076 1208705 - 1208727 + G 71 -9.9 -3.19522 | gap 1 AGGCAGAGATTTGGA GCGCACTGTG TTGT CAC-GTGCGC TTCGCTATTACCTAC purU 1207938 - 1208792 + | formyltetrahydrofolate deformylase Pnuc_1154 1209581 - 1208796 - | putative cytochrome c TERM 1077 1209462 - 1209485 + g 79 -2.4 -5.47218 | overlap 1209464 CTTATTTTCAGCAGA CATCAGTTCA TAGC TGGATTGAGG TTTTTTTACCTCGGC Pnuc_1155 1209907 - 1209578 - | putative sulfur oxidation protein Pnuc_1156 1210389 - 1209904 - | hypothetical protein TERM 1078 1210259 - 1210269 + g 70 -2.4 -5.02074 | TCTTGAATGGCTTTC GCTG CAT CTGC TTTTTTGGCAAATAC Pnuc_1157 1210838 - 1210386 - | hypothetical protein Pnuc_1158 1213082 - 1210866 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Pnuc_1159 1213541 - 1213092 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Pnuc_1160 1213672 - 1214022 + | LrgA family protein TERM 1079 1214223 - 1214236 + G 70 -5.3 -4.41302 | CCTACTCCACTTACT TTGAG GGCG CTCAA TTTATTCATTTCCTA TERM 1080 1214528 - 1214544 + G 75 -6.5 -4.4767 | ATCACCGGCATTCTA GGTGCTA TCT TGGCGCC TTTTGTGCTCAATGC Pnuc_1161 1214015 - 1214740 + | LrgB family protein Pnuc_1162 1214955 - 1215947 + | hypothetical protein TERM 1081 1216314 - 1216334 + G 73 -7.5 -4.07975 | opp_overlap 1216314, overlap 1216325 TGATTGGTTGGAATA CCGTGACTG TTC CAGGCATGG TTTCTGGTTGGATTG TERM 1082 1216367 - 1216377 + G 71 -6.8 -4.09511 | CTCTCGCGTAAATTC GGCA AAC TGCC TTTTGCGCAACTCTT Pnuc_1163 1215995 - 1217584 + | gamma-glutamyltransferase Pnuc_1164 1218929 - 1217592 - | hypothetical protein Pnuc_1165 1220519 - 1218966 - | diguanylate cyclase TERM 1083 1219862 - 1219890 + g 72 -6 -4.42788 | opp_overlap 1219866, overlap 1219863 1219866 TTTTGTCACCTCGGT ACAAGGTAATGG ATGAG CCATTACCTAGA TTTTCTCCAATTCGC TERM 1084 1219863 - 1219889 + g 71 -9.5 -3.25191 | opp_overlap 1219866, overlap 1219862 1219866 TTTGTCACCTCGGTA CAAGGTAATGG ATGAG CCATTACCTAG ATTTTCTCCAATTCG TERM 1085 1219886 - 1219866 - G 71 -9.8 -3.29511 | opp_overlap 1219866 1219863 1219862 GTCACCTCGGTACAA GGTAATGG ATGAG CCATTACC TAGATTTTCTCCAAT Pnuc_1166 1221706 - 1220516 - | metal dependent phosphohydrolase Pnuc_1167 1221945 - 1222958 + | cellulase Pnuc_1168 1222960 - 1224504 + | hypothetical protein Pnuc_1169 1224875 - 1224501 - | TPR repeat-containing protein Pnuc_1170 1228702 - 1224887 - | cellulose synthase domain-containing protein Pnuc_1171 1231436 - 1228707 - | cellulose synthase (UDP-forming) Pnuc_1172 1232144 - 1231443 - | hypothetical protein Pnuc_1173 1232488 - 1232144 - | diacylglycerol kinase Pnuc_1174 1233342 - 1232518 - | diguanylate cyclase Pnuc_1175 1234523 - 1233354 - | metal dependent phosphohydrolase TERM 1086 1234929 - 1234963 + G 83 -14.2 -2.62184 | GTGGATGCCGCTGAG GCTGCTGCTGATGCGG CTG CCGCTTCAGCCGAAGC TGCTATAGAGGCAGC TERM 1087 1235000 - 1234973 - g 74 -11.2 -2.88579 | CGAAGCTGCTATAGA GGCAGCTGCTGC CTCT GCCGCAGCTGCT GCTGCAGCTGCAGCT Pnuc_1176 1234674 - 1235165 + | hypothetical protein TERM 1088 1235210 - 1235179 - T 95 -14 -3.38966 | gap 1, opp_overlap 1235188, overlap 1235188 AAAAGGGATTCATAA TGAGAAAAAGCCCCT TTT AGGGGCTTTTT-TCA CAGAATTCGGTGGGG TERM 1089 1235188 - 1235202 + T 95 -11.4 -5.01732 | opp_overlap 1235179 1235188 TCATAATGAGAAAAA GCCCCT TTT AGGGGC TTTTTTCACAGAATT TERM 1090 1235202 - 1235188 - T 95 -11.4 -5.01535 | opp_overlap 1235188, overlap 1235179 TCATAATGAGAAAAA GCCCCT TTT AGGGGC TTTTTTCACAGAATT Pnuc_1177 1236408 - 1235365 - | tRNA-dihydrouridine synthase A Pnuc_1178 1237796 - 1236978 - | hypothetical protein Pnuc_1179 1239150 - 1237849 - | amidase TERM 1091 1239194 - 1239173 - R 100 -14.5 -4.46514 | opp_overlap 1239171 ATTTATTCAAAGAAA TGGGGCGTA AAAA TACGCCCCA AGTGGATTAATAATA Pnuc_1180 1240185 - 1239214 - | putative ABC transporter, periplasmic protein Pnuc_1181 1241029 - 1240214 - | binding-protein-dependent transport systems inner membrane component Pnuc_1182 1241814 - 1241026 - | ABC transporter related TERM 1092 1241960 - 1242007 + r 100 -16.8 -3.28984 | opp_overlap 1241969 1241977, overlap 1241963 1241969 1241977 TATGAATCCACTACC TAGTTCAAATAAAAAAACTACC CTTA GGTAGTTTTTTTATTTGAATGA TTAATAATTAAATTA TERM 1093 1241963 - 1242004 + r 100 -20.7 -2.81815 | opp_overlap 1241969 1241977, overlap 1241960 1241969 1241977 GAATCCACTACCTAG TTCAAATAAAAAAACTACC CTTA GGTAGTTTTTTTATTTGAA TGATTAATAATTAAA TERM 1094 1241998 - 1241969 - R 95 -13.9 -3.61356 | opp_overlap 1241963 1241960 1241969 1241977, overlap 1241977 ACTACCTAGTTCAAA TAAAAAAACTACC CTTA GGTAGTTTTTTTA TTTGAATGATTAATA TERM 1095 1241969 - 1241998 + r 95 -13.9 -3.72241 | opp_overlap 1241969 1241977, overlap 1241963 1241960 1241977 ACTACCTAGTTCAAA TAAAAAAACTACC CTTA GGTAGTTTTTTTA TTTGAATGATTAATA TERM 1096 1241977 - 1241990 + r 100 -6.7 -5.96894 | opp_overlap 1241969 1241977, overlap 1241969 1241963 1241960 GTTCAAATAAAAAAA CTACC CTTA GGTAG TTTTTTTATTTGAAT TERM 1097 1241990 - 1241977 - R 100 -6.7 -5.95539 | opp_overlap 1241977 1241969 1241963 1241960, overlap 1241969 GTTCAAATAAAAAAA CTACC CTTA GGTAG TTTTTTTATTTGAAT Pnuc_1183 1242830 - 1242015 - | hypothetical protein Pnuc_1184 1242878 - 1244056 + | amidase TERM 1098 1244507 - 1244487 - g 70 -2.5 -5.00138 | opp_overlap 1244492, overlap 1244489 1244492 TACGCAAACGAAAAA TATATCCTG GAC CAGGTTATC GTTCCAATTAACTCC Pnuc_1185 1244124 - 1245119 + | ABC transporter, substrate binding protein Pnuc_1186 1245122 - 1245895 + | binding-protein-dependent transport systems inner membrane component Pnuc_1187 1245892 - 1246662 + | ABC transporter related TERM 1099 1246809 - 1246799 - g 72 -5.4 -4.39748 | overlap 1246796 CATCACAGAAAATAA CCAT GTC ATGG TGACGCTAACTGGTG Pnuc_1188 1246668 - 1247093 + | hypothetical protein Pnuc_1190 1248278 - 1247658 - | urease accessory protein UreG Pnuc_1191 1248982 - 1248290 - | urease accessory protein UreF Pnuc_1192 1249568 - 1248972 - | UreE urease accessory domain-containing protein ureC 1251280 - 1249577 - | urease subunit alpha TERM 1100 1251219 - 1251196 - G 71 -10.3 -2.75481 | TTTCAACCTCAATCA TGAGGCCGG TATCAG CCAGCCTCA GGCGATCACCAGTAG Pnuc_1194 1251618 - 1251280 - | urease, beta subunit Pnuc_1195 1252247 - 1251615 - | HupE/UreJ protein Pnuc_1196 1252561 - 1252259 - | urease, gamma subunit Pnuc_1197 1253485 - 1252580 - | urease accessory protein UreD Pnuc_1198 1254183 - 1253491 - | ABC transporter related TERM 1101 1253846 - 1253857 + g 75 -3 -5.09426 | opp_overlap 1253827 1253846 AATAGCTCGTAGATA TATC CAGG GATA TTTTTTGGGCTTGAG Pnuc_1199 1254983 - 1254186 - | ABC transporter related Pnuc_1200 1256122 - 1254980 - | inner-membrane translocator TERM 1102 1255432 - 1255422 - G 72 -3.2 -5.00196 | overlap 1255424 CGGCAAAGAATAAAA CTGC CCA ACAG GACTAAGAAGGTAAC TERM 1103 1255854 - 1255841 - G 75 -3.1 -5.10029 | ACCAATGGCAAAAAA TAAGC CATG GCCTA AACTCAAAATTCCAC Pnuc_1201 1257708 - 1256125 - | inner-membrane translocator TERM 1104 1257747 - 1257724 - R 90 -12.4 -3.59649 | opp_overlap 1257722 1257719, overlap 1257725 AAATAAGTTTTGAAA GCCCTCCCTC AAAT GAGGGAGGGA AATCCTATTGAAAAT TERM 1105 1257746 - 1257725 - R 100 -15.9 -2.75066 | opp_overlap 1257722 1257719, overlap 1257724 AATAAGTTTTGAAAG CCCTCCCTC AAAT GAGGGAGGG AAATCCTATTGAAAA Pnuc_1202 1259021 - 1257762 - | putative urea/short-chain amide-binding signal peptide protein TERM 1106 1257916 - 1257950 + g 72 -5 -4.58663 | opp_overlap 1257935, overlap 1257921 AAATGGTGATTAGCG CCCATCACTTCAAG ATAACCA CTTGGAGTGTTGAG TTTTTGGCCAATCAT Pnuc_1203 1260993 - 1259689 - | secretory lipase TERM 1107 1260436 - 1260451 + g 79 -9 -4.02334 | opp_overlap 1260435 TTCACTCATAGAACC TGCTGC GCGT GCAGCA TTTATGGTATCCATG Pnuc_1204 1261559 - 1261254 - | hypothetical protein Pnuc_1205 1262771 - 1261563 - | hypothetical protein TERM 1108 1261823 - 1261854 + g 78 -5.8 -4.8048 | overlap 1261824 TTTTTGCTTCCATAT CTTGAGCGAAAGCC GCTA GGCTTAGGCTCAAA TTTTTAATCTGCCCA TERM 1109 1261824 - 1261853 + g 72 -9.3 -3.47806 | overlap 1261823 TTTTGCTTCCATATC TTGAGCGAAAGCC GCTA GGCTTAGGCTCAA ATTTTTAATCTGCCC Pnuc_1206 1264210 - 1262768 - | hypothetical protein TERM 1110 1263092 - 1263060 - G 84 -13.6 -2.90194 | opp_overlap 1263064, overlap 1263081 1263082 1263084 AGGCCTTGAATGAGA TTCATCCGCTGCCT TAAGT AAGCAGCGGATAAA TTCCACTGTAAACCA TERM 1111 1263510 - 1263521 + g 72 -5.8 -4.37527 | GGCTCAAATTCAGTT GCGA GAAT TCGC TTTTGGTAGTTATCG TERM 1112 1264244 - 1264256 + r 76 -3.5 -5.31519 | CAATTTCAGCGCCTT TTTAT AAG ATAAA TTTTTATTTCCCTAT Pnuc_1207 1264592 - 1264260 - | hypothetical protein TERM 1113 1264794 - 1264765 - R 93 -14.5 -2.84602 | opp_overlap 1264771, overlap 1264768 1264771 TGCACCGCATTAAAG CAATAAGGGCAAC CTAA GTTGCCCTTATTA AAATCAATTCATACA TERM 1114 1264791 - 1264768 - R 95 -14 -3.56972 | opp_overlap 1264771, overlap 1264765 1264771 ACCGCATTAAAGCAA TAAGGGCAAC CTAA GTTGCCCTTA TTAAAATCAATTCAT TERM 1115 1264788 - 1264771 - R 90 -11.3 -3.91541 | opp_overlap 1264771, overlap 1264768 1264765 GCATTAAAGCAATAA GGGCAAC CTAA GTTGCCC TTATTAAAATCAATT TERM 1116 1264771 - 1264788 + r 88 -11.3 -3.6579 | opp_overlap 1264771 1264768 1264765 GCATTAAAGCAATAA GGGCAAC CTAA GTTGCCC TTATTAAAATCAATT Pnuc_1208 1265075 - 1264821 - | hypothetical protein Pnuc_1209 1265484 - 1265101 - | hypothetical protein TERM 1117 1266108 - 1266096 - g 72 -2.7 -4.9792 | opp_overlap 1266096 GACTGCACACAAAAA TACTC TGC AAGTA TCTTTAATATTTCAG TERM 1118 1267105 - 1267075 - g 79 -10.5 -3.61356 | ATCACCCAGGTGAAA TTGATGCGCCGCA TATTG TCCGACGCATCAA CAAGAATGAGGTAAG Pnuc_1210 1265625 - 1267265 + | glutamate synthase (NADPH) Pnuc_1211 1268104 - 1267262 - | diguanylate cyclase Pnuc_1212 1269395 - 1268496 - | pseudouridine synthase Pnuc_1213 1269658 - 1269443 - | hypothetical protein Pnuc_1214 1270888 - 1269674 - | polyhydroxyalkanoate depolymerase, intracellular Pnuc_1215 1271223 - 1270888 - | hypothetical protein Pnuc_1216 1271651 - 1271214 - | cupin 2 domain-containing protein Pnuc_1217 1272313 - 1271654 - | glutathione S-transferase domain-containing protein Pnuc_1218 1272487 - 1275894 + | transglutaminase domain-containing protein TERM 1119 1275994 - 1275967 - g 84 -13.6 -2.78384 | gap 1 CTCTTGTGGATGAGA TCACTCGCC-TAG CAC CTAAGGCGAGTGA GGGGCATTTCGACGA Pnuc_1219 1275906 - 1278518 + | hypothetical protein Pnuc_1220 1278531 - 1279454 + | transglutaminase domain-containing protein Pnuc_1221 1280287 - 1279460 - | hypothetical protein TERM 1120 1279985 - 1279970 - G 78 -5.4 -4.80882 | AGCCCACATTAAAAA GACTTC ATGT GAAGCC CGGTGATACCAGTAG Pnuc_1222 1282671 - 1280317 - | RNA-binding S1 domain-containing protein TERM 1121 1281389 - 1281372 - G 70 -9.9 -3.11326 | CAGAAGCTGAATAGA CAGAAGC GCCC GCTTCTG AAACCACTATCTTGG TERM 1122 1282585 - 1282570 - G 71 -6.8 -4.18702 | ATAACGGGCAATAAA GGGTAC CGTT GCACCC TCATCCAATAAAGCA TERM 1123 1283020 - 1283045 + G 72 -2.6 -5.04601 | gap 1 TTGCCTTATTGATGG CCACGTTGTCT CAAAC AG-CAACCTGG TTTTTAATTTCTGCA Pnuc_1223 1282728 - 1283909 + | major facilitator transporter TERM 1124 1283936 - 1283907 - T 100 -16.7 -3.05384 | opp_overlap 1283911 1283914, overlap 1283911 1283914 TTTTTCCTTACCGAA TAAATAAGCCACC CTAG GGTGGCTTATTTA TGACGCTAGAGTAAA TERM 1125 1283932 - 1283911 - T 100 -13.1 -4.20516 | opp_overlap 1283911 1283914, overlap 1283907 1283914 TCCTTACCGAATAAA TAAGCCACC CTAG GGTGGCTTA TTTATGACGCTAGAG TERM 1126 1283911 - 1283932 + T 100 -13.1 -3.87815 | opp_overlap 1283911 1283907 1283914, overlap 1283914 TCCTTACCGAATAAA TAAGCCACC CTAG GGTGGCTTA TTTATGACGCTAGAG TERM 1127 1283929 - 1283914 - T 89 -10.4 -4.22554 | opp_overlap 1283914 1283911, overlap 1283911 1283907 TTACCGAATAAATAA GCCACC CTAG GGTGGC TTATTTATGACGCTA TERM 1128 1283914 - 1283929 + T 86 -10.4 -4.07133 | opp_overlap 1283911 1283907 1283914, overlap 1283911 TTACCGAATAAATAA GCCACC CTAG GGTGGC TTATTTATGACGCTA Pnuc_1224 1285786 - 1283969 - | GTP-binding protein TypA TERM 1129 1284013 - 1284030 + g 74 -5.5 -4.63184 | overlap 1284028 GCTCCTTGAGGTGGC GCTTACG AATC CGTACGC TTTTTGGCGTGACTT TERM 1130 1285555 - 1285519 - G 73 -10.2 -3.05647 | gap 1, opp_overlap 1285517, overlap 1285513 1285515 1285522 CGTCAACCATAGAGA GCACACGCTCTACTTCG CCAC CGAAGTCG-GCGTGTCC CGGTGTGTCTACGAT TERM 1131 1285552 - 1285522 - G 71 -10.5 -2.74485 | gap 1, opp_overlap 1285517, overlap 1285513 1285515 1285519 CAACCATAGAGAGCA CACGCTCTACTTCG CCAC CGAAGTCG-GCGTG TCCCGGTGTGTCTAC TERM 1132 1285580 - 1285603 + g 74 -11 -2.76815 | overlap 1285579 TACGATATTGATATG TGTGCCGTCG TATT CGACTGCACA GTTCTTGGACAAAAT TERM 1133 1285898 - 1285871 - R 82 -10.6 -3.60798 | gap 1, overlap 1285867 AGCCTGAGAAATCAA GCGCTTGGGATGT AAT AC-TCCCGAGCGC CAATCCGCAGTACCA Pnuc_1225 1286761 - 1285853 - | tRNA pseudouridine synthase B TERM 1134 1286277 - 1286289 + g 75 -6.3 -4.43844 | opp_overlap 1286277 TCTGGCCATTGAACA TTCGT CCA ACGAA TTTTATGGATGGTGA Pnuc_1226 1287133 - 1286765 - | ribosome-binding factor A Pnuc_1227 1289916 - 1287154 - | translation initiation factor IF-2 TERM 1135 1289156 - 1289172 + g 75 -2.9 -5.2166 | CCTTCAGGTTTTGCT GGCTTAT GCA ATGTGCC TTTTTTCGCTTCTTC nusA 1291411 - 1289930 - | transcription elongation factor NusA TERM 1136 1290342 - 1290352 + g 78 -5.4 -4.89729 | AACAATTGACGTACA GAAG ATG CTTC TTTTTCAGTTTTCTC Pnuc_1229 1291899 - 1291408 - | hypothetical protein TERM 1137 1291948 - 1291933 - R 100 -9 -6.10489 | opp_overlap 1291931 1291933 AATGGCAAAAAAAAA TGGGCT TCAA AGCCCA TATTCTCGAAATTCA TERM 1138 1291933 - 1291948 + r 70 -9 -3.23447 | opp_overlap 1291933, overlap 1291931 AATGGCAAAAAAAAA TGGGCT TCAA AGCCCA TATTCTCGAAATTCA Pnuc_1230 1293835 - 1292072 - | pseudouridine synthase TERM 1139 1293742 - 1293762 + g 79 -10.5 -3.49475 | CACCTTCGGTCTTGG CACCATCAG AAT TTGATGGTG TTGTGTCCGCGTGGG Pnuc_1231 1294606 - 1293842 - | putative transcriptional regulator Pnuc_1232 1294758 - 1295663 + | patatin Pnuc_1233 1296356 - 1295712 - | NLP/P60 protein Pnuc_1234 1298130 - 1296493 - | ABC transporter related TERM 1140 1297699 - 1297676 - G 77 -3.8 -5.1356 | gap 1, opp_overlap 1297676 1297689 GGGTAGGAATAAAAA CGGCGCT-CAG GCT CTGGAATGCCG GTCTTTTTCAAAAGA Pnuc_1235 1299152 - 1298127 - | binding-protein-dependent transport systems inner membrane component TERM 1141 1298786 - 1298770 - G 76 -8.7 -4.15669 | overlap 1298782 AAGCCATAAATTAAA CGCGATA GCA CATCGCG ACCGCGATCATCAGT Pnuc_1236 1300213 - 1299149 - | binding-protein-dependent transport systems inner membrane component TERM 1142 1299394 - 1299375 - G 74 -5.6 -4.6635 | overlap 1299379 AAAGCGCCAATAAAA GCAGCCGG AAAG CCGGTTAC CAAAGGGAGCATGGC Pnuc_1237 1302093 - 1300225 - | extracellular solute-binding protein Pnuc_1238 1302144 - 1302929 + | short-chain dehydrogenase/reductase SDR TERM 1143 1303036 - 1303060 + G 78 -6.4 -4.68424 | opp_overlap 1303036 AGAGTTAGTTGAAAA GCGTCGCT GGATTTCAG AGCGGCGC TTTTTACATGCCTTA Pnuc_1239 1302926 - 1304254 + | chromate transporter TERM 1144 1304728 - 1304698 - g 74 -8.2 -3.87815 | opp_overlap 1304697 1304701 GTCTACGCCGATAAA GCCGCTGGCGGCAA TCT TTACCAGCAGCTGC GTTGCCAAAAAAAGC TERM 1145 1304754 - 1304742 - g 79 -2.6 -5.40072 | overlap 1304752 GCGTTGCCAAAAAAA GCGC AAGAA ACGC TATGCCAGCGGCCGT Pnuc_1240 1304359 - 1305312 + | integrase catalytic subunit Pnuc_1241 1305340 - 1306224 + | hypothetical protein Pnuc_1242 1306249 - 1307625 + | MmgE/PrpD family protein TERM 1146 1307698 - 1307721 + G 83 -8.8 -4.37092 | overlap 1307699 TACTAATTTTTTATT TGTTCCTGGC ACTC GCCCGGAACG TTTTATCAAGGCGCT TERM 1147 1307699 - 1307720 + G 71 -10.1 -3.21934 | overlap 1307698 ACTAATTTTTTATTT GTTCCTGGC ACTC GCCCGGAAC GTTTTATCAAGGCGC Pnuc_1243 1307651 - 1308499 + | HpcH/HpaI aldolase Pnuc_1244 1308591 - 1309583 + | hypothetical protein TERM 1148 1309602 - 1309632 + T 100 -17.1 -4.54821 | opp_overlap 1309605 1309609, overlap 1309609 GGTCTAGCTCTTCAA CAATAAAGCCAGC ATCGA GCTGGCTTTATTG TTTTCTGATTGCAAT TERM 1149 1309629 - 1309605 - T 95 -13 -3.62046 | opp_overlap 1309602 1309609, overlap 1309609 CTAGCTCTTCAACAA TAAAGCCAGC ATCGA GCTGGCTTTA TTGTTTTCTGATTGC TERM 1150 1309625 - 1309609 - T 90 -9.4 -4.44667 | opp_overlap 1309602 1309609, overlap 1309605 CTCTTCAACAATAAA GCCAGC ATCGA GCTGGC TTTATTGTTTTCTGA TERM 1151 1309609 - 1309625 + T 93 -9.4 -4.72617 | opp_overlap 1309609 1309605, overlap 1309602 CTCTTCAACAATAAA GCCAGC ATCGA GCTGGC TTTATTGTTTTCTGA Pnuc_1245 1310270 - 1309650 - | hypothetical protein TERM 1152 1309972 - 1309958 - G 70 -5 -4.54047 | CCAGGGGATAGAAAA TAATCG CAA CGATCA CAATGAATGCCTTAA Pnuc_1246 1311520 - 1310267 - | BNR/Asp-box repeat-containing protein Pnuc_1247 1313238 - 1311517 - | glycosyl transferase family protein TERM 1153 1312341 - 1312328 - G 85 -5.9 -5.36441 | opp_overlap 1312328, overlap 1312329 TGCGCAGATAAAAAA CGGCG CTCA CGCCA TGCTTGAATCAAAGT TERM 1154 1312524 - 1312512 - G 72 -9.1 -3.54935 | overlap 1312515 CAAACTCCTTCCAAA CAGCC TCA GGCTG TGGGTCTAGAGCAAA TERM 1155 1312728 - 1312716 - G 73 -4.1 -4.82998 | overlap 1312707 1312717 CTAAACCAAAACAAA GTCCT GCT AGAAC AGGAAAAAATAATTT Pnuc_1248 1314255 - 1313560 - | hypothetical protein TERM 1156 1314743 - 1314713 - g 74 -8.2 -3.87815 | opp_overlap 1314712 1314716 GTCTACGCCGATAAA GCCGCTGGCGGCAA TCT TTACCAGCAGCTGC GTTGCCAAAAAAAGC TERM 1157 1314769 - 1314757 - g 79 -2.6 -5.40072 | overlap 1314767 GCGTTGCCAAAAAAA GCGC AAGAA ACGC TATGCCAGCGGCCGT Pnuc_1249 1314374 - 1315114 + | integrase, catalytic region TERM 1158 1315179 - 1315167 - T 73 -5.5 -4.55697 | ACTTCCACAAATAAA TCAGG GGT CCCGA TTAACCATAATGAAC Pnuc_1250 1316560 - 1315274 - | transposase IS116/IS110/IS902 family protein TERM 1159 1315459 - 1315471 + g 72 -4.9 -4.7254 | overlap 1315451 GTGGTGCGCCTTTAA TATAG CGG CTATA TTTTTGCTGGAAACT TERM 1160 1316429 - 1316418 - G 73 -4.4 -4.90918 | AGAAAAGCAATAAAA CGAT CATG ATCG GCAGCAGAATTAGCC Pnuc_1252 1317833 - 1316985 - | exodeoxyribonuclease III Xth Pnuc_1253 1319280 - 1317826 - | nitrogen metabolism transcriptional regulator, NtrC, Fis family Pnuc_1254 1320410 - 1319277 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 1161 1319918 - 1319928 + g 70 -2.4 -5.01811 | opp_overlap 1319917 CAGCCCCACGAATAC CCCC TAA GGGA TTTTTAATTTCATGC TERM 1162 1320377 - 1320358 - G 100 -13.6 -5.41746 | opp_overlap 1320361 AATGTCGGAAAAAAA GGAGCAGC CGAA GCTGCTCC CTTGAACGAATTGCG Pnuc_1255 1321840 - 1320425 - | glutamine synthetase, type I Pnuc_1256 1322910 - 1322047 - | molybdopterin binding domain-containing protein TERM 1163 1322696 - 1322684 - G 73 -7.7 -4.12188 | TCACCACTTGCAAAA CTCTC TTT GAGAG TGGCAGTAATTTGCT TERM 1164 1322795 - 1322816 + g 72 -8.7 -3.73224 | GTAGCCATGTGCTTG TCTTGACGG CGTC CCGACAAGA TTTCGTCGCCAATCA Pnuc_1257 1323772 - 1322903 - | putative transmembrane protein Pnuc_1258 1324774 - 1323803 - | putative transmembrane protein Pnuc_1259 1325557 - 1324778 - | polysaccharide deacetylase TERM 1165 1325527 - 1325510 - G 100 -8.3 -5.72207 | TCCAAAGGAAAAAAA GCCGAGC AAAA GCACGGC TGCAATACGGATAAA Pnuc_1260 1326604 - 1325567 - | YVTN beta-propeller repeat-containing protein TERM 1166 1325994 - 1326020 + g 71 -3.6 -4.84918 | overlap 1325996 1326012 AAACCAGCGGGCACT TTTCCAGTGGGT ATT ACCCACAAGACA TTTTGTGTTTCTAGA Pnuc_1261 1330656 - 1326664 - | ATP-dependent helicase HrpA Pnuc_1262 1330722 - 1332086 + | N-acetylglutamate synthase Pnuc_1263 1332101 - 1332373 + | hypothetical protein TERM 1167 1332540 - 1332521 - T 70 -8 -3.62864 | opp_overlap 1332524, overlap 1332524 GAAAGCCACTTCAAA TAAGTACA TCTA TGTACTTA TAGGCTAAGGAACTA TERM 1168 1332621 - 1332599 - T 84 -10.5 -3.94634 | opp_overlap 1332599 TACCACGGCAAATAA CCCGATGGG CATAC CCCGTCGGG TTTTTTTATTCCTAA TERM 1169 1332599 - 1332621 + T 100 -12.7 -5.84381 | opp_overlap 1332599 TACCACGGCAAATAA CCCGATGGG CATAC CCCGTCGGG TTTTTTTATTCCTAA Pnuc_1264 1333343 - 1332633 - | ribose 5-phosphate isomerase TERM 1170 1332674 - 1332686 + g 89 -6.3 -5.27335 | CAGCATTACTCACCA GCAAA ATG TTTGC TTTTTCTTTGGCGAA Pnuc_1265 1333394 - 1334413 + | transaldolase B TERM 1171 1334428 - 1334457 + T 84 -10.1 -3.93262 | opp_overlap 1334431 1334436, overlap 1334436 ACCATTTAGCGCCAA AAAGAAAACCCGC CGAA GCGGGTTTTTTTA TTTGATATCTTACAG TERM 1172 1334454 - 1334431 - T 91 -9.6 -4.60041 | opp_overlap 1334428 1334436, overlap 1334436 ATTTAGCGCCAAAAA GAAAACCCGC CGAA GCGGGTTTTT TTATTTGATATCTTA TERM 1173 1334436 - 1334449 + T 100 -9.5 -5.99154 | opp_overlap 1334436 1334431, overlap 1334428 GCGCCAAAAAGAAAA CCCGC CGAA GCGGG TTTTTTTATTTGATA TERM 1174 1334449 - 1334436 - T 100 -9.5 -5.26119 | opp_overlap 1334428 1334436, overlap 1334431 GCGCCAAAAAGAAAA CCCGC CGAA GCGGG TTTTTTTATTTGATA TERM 1175 1334480 - 1334490 + T 70 -5.4 -4.44915 | opp_overlap 1334480 TCTTACAGCCTAGAA CTAC AGA GTAG TTTTGTAAATAGTTC Pnuc_1266 1335823 - 1334480 - | amidohydrolase TERM 1176 1335138 - 1335118 - G 76 -8.2 -4.06678 | ATTCATTCACATAAA GCGGGTCC ATATG GGACTCGC CACCACCACTAGTAG Pnuc_1267 1337885 - 1335885 - | coenzyme A transferase Pnuc_1268 1339337 - 1337937 - | citrate transporter TERM 1177 1338028 - 1338014 - G 74 -5.8 -4.68506 | opp_overlap 1338014 AAGTAATGGCAAAAA TATCTT TGT AAGATA TTTTGTGGGATAGGC TERM 1178 1338014 - 1338028 + g 72 -5.8 -4.4009 | opp_overlap 1338014 AAGTAATGGCAAAAA TATCTT TGT AAGATA TTTTGTGGGATAGGC TERM 1179 1338238 - 1338254 + g 82 -10.9 -3.51232 | overlap 1338234 GTTATTCCCGCTAAG GCTGTGA CGG TCACAGC TTCGTTTACCAAGAC TERM 1180 1339038 - 1339048 + g 71 -6.8 -4.07885 | opp_overlap 1339038 1339036 GACTAAGACAATAGA GAGC ATG GCTC TTTTAGCCCCCACTA Pnuc_1269 1339634 - 1339449 - | hypothetical protein Pnuc_1270 1340406 - 1339651 - | RNA methyltransferase Pnuc_1271 1342813 - 1340426 - | ribonuclease R TERM 1181 1341126 - 1341136 + g 74 -6.8 -4.22346 | ACTTTTACACCCTTT GCTG CAC CAGC TTTTGCATCGCTTTG Pnuc_1272 1343175 - 1344470 + | amino acid permease-associated region Pnuc_1273 1344842 - 1344507 - | branched-chain amino acid transport TERM 1182 1344782 - 1344764 - G 71 -6.8 -4.07568 | CGTGCTCGCCCAAAA TCAAAAAG AAG CTTCTTGA CCATGCAGTTACCCA Pnuc_1274 1345567 - 1344842 - | AzlC family protein TERM 1183 1345302 - 1345287 - G 72 -3.2 -4.93696 | GGTAAATATGAAAAA TGGGCT TGCA ATCCCA AGCTAAAAATAACAA Pnuc_1275 1346073 - 1345576 - | hypothetical protein TERM 1184 1345971 - 1345953 - G 81 -5.2 -5.12172 | CATCAACAAAGAAAA GGTATTGG TCA CCATCACC ATTCACCAAGGTAAA Pnuc_1276 1346780 - 1346097 - | carboxymethylenebutenolidase TERM 1185 1346699 - 1346709 + g 81 -8.2 -4.4009 | CTTGAATCACGACTA CGCC AGG GGCG TTTTCTGCACTCGCG TERM 1186 1346753 - 1346764 + g 74 -5.8 -4.68724 | overlap 1346747 ATCCTTTAACGGATT GACC ATCT GGTC TTTTGTATTCAATCA Pnuc_1277 1348023 - 1346791 - | major facilitator transporter TERM 1187 1347510 - 1347499 - G 72 -5.8 -4.46072 | CCCAATAAACATAAA TGGC GCAC GCCA ACCCAAAGAACTAAT TERM 1188 1347787 - 1347777 - G 77 -6.8 -4.46267 | ACAAGCGAAGTAAAA GCGT ACG ACGC TCAAACCGATCGATG TERM 1189 1348349 - 1348360 + G 79 -2.2 -5.60993 | GCATATCTGTGAAAT CATC ATTT GGTG TTTTTTTATAACGGG Pnuc_1278 1348095 - 1348610 + | hypothetical protein Pnuc_1279 1349091 - 1348597 - | hypothetical protein TERM 1190 1349137 - 1349113 - R 95 -8.7 -5.4505 | opp_overlap 1349113, overlap 1349098 1349096 TTGCCCAATAAAAAA TGGATTTGC TTTTTGG GCAAATCCA TTTTAATGAAGCATC TERM 1191 1349113 - 1349137 + r 89 -10.1 -4.2558 | opp_overlap 1349098 1349096 1349113 TTGCCCAATAAAAAA TGGATTTGCTT TTT GGGCAAATCCA TTTTAATGAAGCATC Pnuc_1280 1351378 - 1349165 - | malate synthase G Pnuc_1281 1352779 - 1351439 - | adenylosuccinate synthetase TERM 1192 1352532 - 1352522 - G 74 -8.2 -3.91488 | AATCTCTTTAAATAA CGCC TCA GGCG ACAAAACCACACCAT TERM 1193 1352566 - 1352607 + g 91 -6.8 -5.60993 | opp_overlap 1352566 1352563 1352568, overlap 1352566 1352569 1352570 CGATGTAGCAAATGA C-ATCCTTGTGCATGATTCC TGAA GGAATCAAGCGCAAG-ATCG TTTTTTTATCGCCAA TERM 1194 1352569 - 1352604 + g 82 -11.2 -3.56036 | opp_overlap 1352568 1352566 1352563, overlap 1352566 1352566 1352570 TGTAGCAAATGACAT CCTTGTGCATGATTCC TGAA GGAATCAAGCGCAAGA TCGTTTTTTTATCGC TERM 1195 1352570 - 1352603 + g 86 -14.7 -2.72537 | opp_overlap 1352568 1352566 1352563, overlap 1352569 1352566 1352566 GTAGCAAATGACATC CTTGTGCATGATTCC TGAA GGAATCAAGCGCAAG ATCGTTTTTTTATCG Pnuc_1282 1353999 - 1352836 - | tRNA synthetase, class II (G, H, P and S) TERM 1196 1353081 - 1353071 - G 82 -6.8 -4.90917 | AAATCTAATGAAAAA CCAG TTG CTGG ACGTGAACGACCGAA TERM 1197 1353401 - 1353429 + g 71 -7.4 -3.83998 | opp_overlap 1353401 1353402, overlap 1353402 TTTGCCGGTAAGCAA G-TCGCCCACTGCC TTA GGC-GAGGGCGATC TTTGCTCTGCAATAA TERM 1198 1353402 - 1353427 + g 82 -11.1 -3.50588 | gap 1, opp_overlap 1353402 1353401, overlap 1353401 TTGCCGGTAAGCAAG TCGCCCACTGCC TTA GGC-GAGGGCGA TCTTTGCTCTGCAAT TERM 1199 1353427 - 1353402 - G 73 -11.1 -2.60075 | gap 1, opp_overlap 1353401 1353402, overlap 1353401 TTGCCGGTAAGCAAG TCGCCCACTGCC TTA GGC-GAGGGCGA TCTTTGCTCTGCAAT Pnuc_1283 1354889 - 1354020 - | HflC protein TERM 1200 1354834 - 1354820 - G 83 -4.3 -5.31855 | GATCAACAATAAAAA TGCTT GAAGA AAGCA CATAGATCAAGGCAA Pnuc_1284 1356400 - 1354889 - | HflK protein Pnuc_1285 1357553 - 1356390 - | GTP-binding protein, HSR1-related TERM 1201 1356959 - 1356947 - G 72 -4.8 -4.61231 | opp_overlap 1356951 CGAGAGTGGCAAAAA GCTG GTCGG CAGC ATAGGTGCCCGCTTT Pnuc_1286 1357866 - 1357624 - | RNA chaperone Hfq Pnuc_1287 1359393 - 1358029 - | small GTP-binding protein TERM 1202 1359283 - 1359242 - G 85 -7.1 -4.94058 | overlap 1359246 TCAACGCAAATAAAA GCACGTTCGCCAATGCGGC CCTT ACCGTAGTGGCGATCTCGC GTTAAGCCTGAAAAA Pnuc_1288 1360556 - 1359390 - | Pyrrolo-quinoline quinone Pnuc_1289 1361215 - 1360556 - | hypothetical protein Pnuc_1290 1362603 - 1361275 - | histidyl-tRNA synthetase TERM 1203 1362540 - 1362553 + g 70 -2.3 -5.0666 | GCAGCAAATCATTCA TGCCG CGCA CGCCA TTTATTTTTTGCGTC TERM 1204 1362566 - 1362576 + g 72 -3.2 -5.0809 | CCATTTATTTTTTGC GTCT TCT GGAC TTTTTCTGGTTTGTT ispG 1363899 - 1362628 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Pnuc_1292 1365121 - 1363913 - | radical SAM protein TERM 1205 1364055 - 1364082 + g 87 -10.5 -4.08216 | opp_overlap 1364052 1364048 CCAGCCAACTGACCG CACGCAGCGGC AATATC GTCGCCGCGTG TTTTACGCACAGTGG TERM 1206 1365033 - 1365044 + g 77 -7.2 -4.4078 | TGCATGAGTTGTTTT GCCC TAAA GGGC TTTTCATTCAACCCC Pnuc_1293 1365581 - 1365156 - | nucleoside-diphosphate kinase Pnuc_1294 1365862 - 1366563 + | hypothetical protein TERM 1207 1366595 - 1366610 + T 100 -11.8 -5.5604 | opp_overlap 1366595 TAGTTACTTCTCAAA GGCGCC TGCG GGCGCC TTTTTTATTGATTAC TERM 1208 1366610 - 1366595 - T 89 -11.8 -3.55761 | opp_overlap 1366595 TAGTTACTTCTCAAA GGCGCC TGCG GGCGCC TTTTTTATTGATTAC Pnuc_1295 1368326 - 1366896 - | RNA methyltransferase Pnuc_1296 1369140 - 1368319 - | 3'-5' exonuclease Pnuc_1297 1369959 - 1369147 - | peptidase M23B Pnuc_1298 1370612 - 1369956 - | protein-L-isoaspartate O-methyltransferase Pnuc_1299 1371394 - 1370609 - | stationary-phase survival protein SurE Pnuc_1300 1374474 - 1371397 - | CzcA family heavy metal efflux protein TERM 1209 1374468 - 1374458 - G 72 -5.4 -4.38154 | ACACCTCTTAGAAAA TTCG TTG CGAA ACTCAATTACTCCTC Pnuc_1301 1375734 - 1374475 - | RND family efflux transporter MFP subunit Pnuc_1302 1377261 - 1375744 - | outer membrane efflux protein Pnuc_1303 1378097 - 1377594 - | hypothetical protein Pnuc_1304 1378974 - 1378156 - | TPR repeat-containing protein Pnuc_1305 1382636 - 1379079 - | UvrD/REP helicase Pnuc_1306 1385623 - 1382639 - | hypothetical protein TERM 1210 1383300 - 1383326 + g 73 -2.3 -5.2015 | ATCCATTCGTGCCGC TCCTCATCTTG CGTTT TAAGATTGGGA TTTTTATGTTCTTCC Pnuc_1307 1385744 - 1386070 + | thioredoxin TERM 1211 1386080 - 1386109 + F 70 -9.4 -2.6027 | gap 1, opp_overlap 1386098 1386100, overlap 1386084 1386086 1386100 ATCTAAGAGTCTCAT G-CCACAGGTTCA GCAAA TGAGCCTGTGGTC TCCATTGGCTTTTGG TERM 1212 1386100 - 1386118 + F 71 -6.6 -4.09739 | opp_overlap 1386098 1386100, overlap 1386086 1386084 1386080 AGGTTCAGCAAATGA GCCTGTGG TCT CCATTGGC TTTTGGCCACATTAA rho 1386367 - 1387629 + | transcription termination factor Rho TERM 1213 1387644 - 1387658 + F 82 -7.8 -4.58395 | ATTTAGGGGTCTAGG GGGCTG TTT TAGCCC TTTTTAGACCCTAAA TERM 1214 1388088 - 1388078 - g 87 -6.8 -5.24531 | overlap 1388064 1388079 ACTGCTGAGAAAAAA GCAG CTG CTGC AGAAGCTAAAGCTGC Pnuc_1309 1387784 - 1388131 + | ribosomal protein L31 TERM 1215 1388183 - 1388198 + F 100 -10.4 -6.04324 | opp_overlap 1388183 CTGCGAGATAATTAA GGCAGC GTTT GCTGCC TTTTTTATTTTTTGC TERM 1216 1388198 - 1388183 - f 79 -10.4 -3.49618 | opp_overlap 1388183 CTGCGAGATAATTAA GGCAGC GTTT GCTGCC TTTTTTATTTTTTGC TERM 1217 1388515 - 1388531 + G 70 -5.1 -4.40526 | CGCTGCAAATGCTGC TCGCTTA TAT TCAGCGA TTTGCTTTTTCTCTG Pnuc_1310 1388231 - 1389949 + | putative inner membrane transmembrane protein TERM 1218 1390252 - 1390235 - g 73 -11.3 -2.74443 | opp_overlap 1390234 1390235, overlap 1390230 1390234 TGGAGAAGAAGTAAG GCAAGCC ACTT GGCTTGC TTTTGGCCTAGCAGT TERM 1219 1390235 - 1390252 + G 89 -11.3 -4.13945 | opp_overlap 1390230 1390234 1390235, overlap 1390234 TGGAGAAGAAGTAAG GCAAGCC ACTT GGCTTGC TTTTGGCCTAGCAGT Pnuc_1311 1389954 - 1391345 + | MATE efflux family protein Pnuc_1312 1392440 - 1391352 - | hypothetical protein Pnuc_1313 1393034 - 1392444 - | membrane lipoprotein lipid attachment site Pnuc_1314 1393414 - 1393058 - | hypothetical protein Pnuc_1315 1395133 - 1393427 - | hypothetical protein Pnuc_1316 1396187 - 1395183 - | hypothetical protein TERM 1220 1396212 - 1396194 - R 73 -9.6 -3.14468 | TTGCATCATATTGAA GCCCAATC AGG GATTGAGC GGCAGAACTTTAAAA Pnuc_1317 1396785 - 1396222 - | hypothetical protein TERM 1221 1396387 - 1396372 - G 73 -10.4 -2.98493 | overlap 1396369 GGCATTAGCAAACCA GGTGCG TGAG CGCACC TCACGATTAGGCAGC TERM 1222 1396423 - 1396413 - G 82 -6.8 -4.73613 | GCAGCATTAACAAAA TGGC TTG GCCA GCTAATAAGCCCATA TERM 1223 1397795 - 1397764 - g 75 -9.6 -3.57271 | opp_overlap 1397764, overlap 1397762 1397771 CTATAACAGCAAAGA CTTCAAAGAAGG TGTTAATG CCTTCCTTGAAG GGCGTCCACCGAAAT Pnuc_1318 1397045 - 1397824 + | enoyl-CoA hydratase Pnuc_1319 1398442 - 1397885 - | lytic transglycosylase, catalytic Pnuc_1320 1399530 - 1398493 - | alpha/beta hydrolase fold Pnuc_1321 1400232 - 1399540 - | fumarylacetoacetate (FAA) hydrolase Pnuc_1322 1400556 - 1400263 - | hypothetical protein Pnuc_1323 1400629 - 1401630 + | hypothetical protein Pnuc_1324 1402370 - 1401648 - | haloacid dehalogenase, type II Pnuc_1325 1403368 - 1402376 - | hypothetical protein Pnuc_1326 1404288 - 1403479 - | hypothetical protein TERM 1224 1403589 - 1403623 + g 79 -11.6 -3.16564 | opp_overlap 1403589 1403600, overlap 1403592 1403598 1403600 TACCCTCGTAGTACA TCATCAAAAAACCCAG TTG CTGGGTATTTTGATAA TTAATGGGCTGGCCA TERM 1225 1403623 - 1403589 - G 84 -13.8 -2.78596 | opp_overlap 1403589 1403592 1403598 1403600, overlap 1403600 TACCCTCGTAGTACA TCATCAAAAAACCCAG TTG CTGGGTATTTTGATAA TTAATGGGCTGGCCA TERM 1226 1403592 - 1403620 + g 82 -13.3 -2.78547 | opp_overlap 1403589 1403600, overlap 1403589 1403598 1403600 CCTCGTAGTACATCA TCAAAAAACCCAG TTG CTGGGTATTTTGA TAATTAATGGGCTGG TERM 1227 1403598 - 1403614 + g 72 -6.5 -4.36411 | opp_overlap 1403589 1403600, overlap 1403592 1403589 1403600 AGTACATCATCAAAA AACCCAG TTG CTGGGTA TTTTGATAATTAATG TERM 1228 1403612 - 1403600 - G 100 -9.1 -5.20216 | opp_overlap 1403598 1403592 1403589 1403600, overlap 1403589 TACATCATCAAAAAA CCCAG TTG CTGGG TATTTTGATAATTAA TERM 1229 1403600 - 1403612 + g 76 -9.1 -3.77927 | opp_overlap 1403600 1403589, overlap 1403598 1403592 1403589 TACATCATCAAAAAA CCCAG TTG CTGGG TATTTTGATAATTAA TERM 1230 1403828 - 1403818 - G 77 -6.8 -4.44667 | opp_overlap 1403816 1403818 CTTGCCAATAATAAA GCGA GCT TCGC TGTTATATCTGGATT TERM 1231 1404280 - 1404298 + g 86 -11.8 -3.64049 | overlap 1404273 GGATGGGGGTGCTAG CTTCTGCA TGA TGCAGAAG TTTAACAATTATTGC Pnuc_1327 1405104 - 1404307 - | class II aldolase/adducin family protein TERM 1232 1404336 - 1404356 + g 71 -7.5 -3.97622 | opp_overlap 1404340, overlap 1404337 1404350 1404355 TGACGCGCTCACTCC ACAACTGCC ATG GGCGGTTGA TTGTCTTTTCAATCG TERM 1233 1404337 - 1404355 + g 75 -11 -2.9785 | opp_overlap 1404340, overlap 1404336 1404350 GACGCGCTCACTCCA CAACTGCC ATG GGCGGTTG ATTGTCTTTTCAATC TERM 1234 1405090 - 1405080 - G 79 -2.4 -5.58074 | TAACCATCAAAAAAA CTGC AAG GCTG AATAATCGCTTCATT TERM 1235 1405163 - 1405146 - R 70 -3.5 -4.98917 | opp_overlap 1405161, overlap 1405161 TAAAAGAGAACAAAA TCATTAC TCAA ATAATGA AAGCCATCGTGATGA TERM 1236 1405187 - 1405161 - R 100 -13.9 -3.97674 | opp_overlap 1405161 1405166, overlap 1405146 1405166 TCATTACTCAAATAA TGAAAGCCATC GTGAT GATGGCTTTCA TTGCTACAGTTAGAT TERM 1237 1405161 - 1405187 + r 100 -14.6 -3.1886 | opp_overlap 1405146 1405161 1405166, overlap 1405166 TCATTACTCAAATAA TGAAAGCCATCG TGA TGATGGCTTTCA TTGCTACAGTTAGAT TERM 1238 1405182 - 1405166 - R 77 -8 -4.15366 | opp_overlap 1405166 1405161, overlap 1405161 ACTCAAATAATGAAA GCCATC GTGAT GATGGC TTTCATTGCTACAGT TERM 1239 1405166 - 1405182 + r 77 -8.7 -3.95852 | opp_overlap 1405161 1405166, overlap 1405161 ACTCAAATAATGAAA GCCATCG TGA TGATGGC TTTCATTGCTACAGT Pnuc_1328 1406127 - 1405228 - | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Pnuc_1329 1408275 - 1406362 - | ferrous iron transport protein B TERM 1240 1407264 - 1407238 - G 71 -7.2 -4.18934 | TAGCAGCGGAATAAA GGAGCGGCCAGA AAG TCCAACCGATCC CATCACGCGATCCAA Pnuc_1330 1408513 - 1408268 - | FeoA family protein TERM 1241 1408594 - 1408562 - H 75 -10.1 -2.94416 | opp_overlap 1408549 1408546 1408543 1408571, overlap 1408546 1408543 1408542 1408540 1408570 GATTCTCATTATATA CTTTATAATTGAGAA TAG TTCTCATTTACAAAG CACCTTAAGTACAGC TERM 1242 1408725 - 1408735 + G 77 -6.8 -4.38927 | CTTGTGACCCTTTTT GTCC TGT GGAC TTTCTTGTCTGCACA TERM 1243 1409453 - 1409434 - g 72 -5 -4.62336 | gap 1, opp_overlap 1409441 ACTGGATCTTAAAAA TGGC-TCGC TTG GCAATGCCA ACTATTCCGAATACC Pnuc_1331 1408617 - 1410101 + | carbohydrate-selective porin OprB TERM 1244 1410339 - 1410327 - g 80 -6.3 -4.77438 | ATCCACTATCAAAAA TTGCT ACG AGCAA GGCTACAGCAGTAAC Pnuc_1332 1410137 - 1410760 + | FMN-binding negative transcriptional regulator Pnuc_1333 1411524 - 1410766 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 1245 1411574 - 1411555 - R 100 -12.2 -5.76633 | opp_overlap 1411555 GGATAGATAAAAAAA TCGACCCT AATT AGGGTCGA TTCTCTATAAACTTG TERM 1246 1411555 - 1411574 + r 89 -12.2 -3.60412 | opp_overlap 1411555 GGATAGATAAAAAAA TCGACCCT AATT AGGGTCGA TTCTCTATAAACTTG Pnuc_1334 1413235 - 1411598 - | major facilitator transporter Pnuc_1335 1414295 - 1413273 - | molybdate metabolism transcriptional regulator Pnuc_1336 1414373 - 1415197 + | putative sulfate transport system substrate-binding protein Pnuc_1337 1415228 - 1415452 + | TOBE domain-containing protein TERM 1247 1415479 - 1415494 + T 95 -11.8 -4.22475 | opp_overlap 1415479 TTGCCCATTAAAAAA GCCCGC GTTA GCGGGC TTCTTATTTTCACTG TERM 1248 1415494 - 1415479 - T 100 -11.8 -5.14563 | opp_overlap 1415479 TTGCCCATTAAAAAA GCCCGC GTTA GCGGGC TTCTTATTTTCACTG Pnuc_1338 1416116 - 1415535 - | hypothetical protein Pnuc_1339 1416263 - 1416703 + | GCN5-related N-acetyltransferase Pnuc_1340 1416734 - 1417162 + | thioesterase superfamily protein Pnuc_1341 1417174 - 1417752 + | hypothetical protein TERM 1249 1417854 - 1417880 + F 72 -8.8 -3.60323 | opp_overlap 1417854, overlap 1417852 1417857 AGTCGTTTAATTGAA TACGGGTCAATA CAT TATTGGCCCCTA TGTTATTTACTGATC TERM 1250 1417857 - 1417877 + F 72 -10.5 -2.6138 | opp_overlap 1417854, overlap 1417854 1417852 CGTTTAATTGAATAC GGGTCAATA CAT TATTGGCCC CTATGTTATTTACTG TERM 1251 1419134 - 1419112 - g 72 -4.7 -4.68593 | CGCACCAGCCAAAAA GGCCCCCGC TAAAC GCAGCAGCC CACCTAAAAGATCAT Pnuc_1342 1417880 - 1419160 + | DEAD/DEAH box helicase domain-containing protein TERM 1252 1419769 - 1419743 - g 100 -11 -4.82678 | GTAGAAAAAGCAAAA GCCATCTACAAC TGG GTTGTAGATAAC ACTCATCGTGATCCT Pnuc_1343 1419212 - 1420321 + | transglutaminase domain-containing protein Pnuc_1344 1420350 - 1420895 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Pnuc_1345 1420923 - 1421987 + | selenide, water dikinase Pnuc_1346 1422270 - 1422001 - | hypothetical protein Pnuc_1347 1422327 - 1422620 + | hypothetical protein TERM 1253 1422658 - 1422636 - T 100 -9.9 -5.40474 | ATTGGCGTAAAAAAA GCCTAGCTC GTATA AAGCTAGGC TTAGAAATCAATAGT Pnuc_1348 1422869 - 1422681 - | hypothetical protein Pnuc_1349 1423030 - 1424004 + | hypothetical protein Pnuc_1350 1424043 - 1425629 + | rhodanese domain-containing protein Pnuc_1351 1426701 - 1425652 - | fumarylacetoacetate (FAA) hydrolase TERM 1254 1426850 - 1426868 + G 75 -9.6 -3.59262 | CGCCTGATGACCTAC GCCCTAAT CGT ATTGGGGC TTTGCGCCTGTGAGC Pnuc_1352 1426823 - 1427122 + | hypothetical protein Pnuc_1353 1427150 - 1427371 + | hypothetical protein TERM 1255 1427397 - 1427376 - T 100 -7.3 -5.63517 | gap 1, opp_overlap 1427371 1427376 GCTGGAAATAAAAAA CCGCCCTAGT ACA AC-AAGGCGG TTTTATTGGTTTGAG TERM 1256 1427376 - 1427397 + T 77 -5.1 -4.84642 | gap 1, opp_overlap 1427376, overlap 1427371 GCTGGAAATAAAAAA CCGCCCTAGT ACA AC-AAGGCGG TTTTATTGGTTTGAG TERM 1257 1427412 - 1427431 + T 76 -3.6 -5.1861 | GTTTTATTGGTTTGA GAAGAG ATTAATCG CTCTTC TTTTTTGATCCTGGA Pnuc_1354 1427946 - 1427419 - | hypothetical protein Pnuc_1355 1428052 - 1428441 + | globin TERM 1258 1428594 - 1428615 + G 83 -6.5 -5.04385 | opp_overlap 1428598, overlap 1428599 TTTTACCACTCTTAA GCGACCCCA ATGC TTGGGTTGC TTTTTTCACGCTATC TERM 1259 1428599 - 1428611 + G 71 -7.7 -3.93166 | opp_overlap 1428598, overlap 1428594 CCACTCTTAAGCGAC CCCAA TGC TTGGG TTGCTTTTTTCACGC Pnuc_1356 1428566 - 1429333 + | integral membrane protein TerC Pnuc_1357 1430546 - 1429317 - | hypothetical protein Pnuc_1358 1431062 - 1430550 - | hypothetical protein Pnuc_1359 1431959 - 1431102 - | hypothetical protein TERM 1260 1431868 - 1431889 + g 72 -8.1 -3.79071 | gap 1, opp_overlap 1431852 1431867 GCAAATCGATACGAT TCGTCAGAGG TCT CCTCTGA-GA TTTCACTCTTGTGAA TERM 1261 1432290 - 1432274 - g 73 -2.2 -5.2166 | overlap 1432265 1432276 GAAGAAGCTAAAAAA GATGCT CCTCC AGCAGC TCCAACAGCACCAGC TERM 1262 1432326 - 1432298 - g 82 -13.1 -3.04792 | CCAGCAGCTCCAACA GCACCAGCAGCAG CAC CTGCAGCTGACGC CAAGAAGTAATACCT Pnuc_1360 1432133 - 1432336 + | hypothetical protein TERM 1263 1432378 - 1432353 - f 81 -11.9 -2.82505 | opp_overlap 1432358, overlap 1432358 ACCTTATAGTCAAAC GAAAACCGCGG TCCT CCGCGGTTTTT TACATTTACCTGATG TERM 1264 1432358 - 1432373 + F 100 -11.8 -5.22039 | opp_overlap 1432358 1432353 ATAGTCAAACGAAAA CCGCGG TCCT CCGCGG TTTTTTACATTTACC TERM 1265 1432373 - 1432358 - f 95 -11.8 -4.57516 | opp_overlap 1432358, overlap 1432353 ATAGTCAAACGAAAA CCGCGG TCCT CCGCGG TTTTTTACATTTACC TERM 1266 1432393 - 1432408 + G 78 -4.8 -5.0666 | overlap 1432393 TTACATTTACCTGAT GAAAAA AATA TTTTTC TTTCTTTTTTCGCTC TERM 1267 1432393 - 1432412 + G 73 -2.2 -5.14477 | overlap 1432393 TTACATTTACCTGAT GAAAAAAA TATT TTTCTTTC TTTTTTCGCTCTGTC Pnuc_1361 1432391 - 1433200 + | extracellular solute-binding protein Pnuc_1362 1434626 - 1433211 - | RNA-metabolising metallo-beta-lactamase TERM 1268 1435526 - 1435501 - g 72 -5.3 -4.56775 | opp_overlap 1435501, overlap 1435502 AGTCTCGTGGAAAAA GGGGTTGGACC CATT GGCTTAACCCC CTCAGAAACGATTAT Pnuc_1363 1434691 - 1435575 + | carbohydrate kinase, YjeF related protein TERM 1269 1436532 - 1436505 - g 100 -11.4 -5.27335 | TCCGCCAAAGAAAAA GTCACCAGACTC AAAT GAATCTAGTGAC GTAGATGATGCAAAA Pnuc_1364 1435582 - 1436559 + | hypothetical protein TERM 1270 1436566 - 1436549 - T 88 -8.5 -4.69664 | overlap 1436560 TAGATGATGCAAAAA TCCTCAA TTAA TTGAGGA TTCAAGATTACTGAA Pnuc_1365 1436855 - 1436574 - | protein tyrosine phosphatase, receptor type, F-like protein Pnuc_1366 1436912 - 1437565 + | hypothetical protein TERM 1271 1437611 - 1437582 - T 100 -16.7 -3.96624 | opp_overlap 1437588, overlap 1437588 TAGTGCGAGTACAAA TAAAAAGGCCATC ATCT GATGGCCTTTTTA TTGCAGAGAAAAAAT TERM 1272 1437588 - 1437605 + T 95 -11.3 -5.06414 | opp_overlap 1437582 1437588 GAGTACAAATAAAAA GGCCATC ATCT GATGGCC TTTTTATTGCAGAGA TERM 1273 1437605 - 1437588 - T 100 -11.3 -5.40464 | opp_overlap 1437588, overlap 1437582 GAGTACAAATAAAAA GGCCATC ATCT GATGGCC TTTTTATTGCAGAGA Pnuc_1367 1438777 - 1437629 - | aminotransferase, class V Pnuc_1368 1439778 - 1438831 - | hypothetical protein Pnuc_1369 1440711 - 1439782 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Pnuc_1370 1441676 - 1440786 - | hypothetical protein TERM 1274 1440932 - 1440913 - G 79 -2.8 -5.41746 | gap 1, opp_overlap 1440913, overlap 1440914 1440915 AAGTTGGCAAAAAAA GC-GGCC ACCGTAG GGCCAGC CTTGCTTACACCAAG TERM 1275 1441107 - 1441094 - G 81 -5.3 -5.17507 | AAAAGCCAATAAAAA CTTGA GCCA TCAAG AACTCAGCCCACGGC Pnuc_1371 1441819 - 1442964 + | L-lactate dehydrogenase (cytochrome) Pnuc_1372 1443094 - 1443765 + | hypothetical protein Pnuc_1373 1444045 - 1444587 + | cytochrome B561 TERM 1276 1444808 - 1444777 - T 100 -9.4 -5.27779 | overlap 1444780 CCCAACAGCAAAAAA TAAGGCCCCACATC CAAA GAGGTGAGGCCTGA TAGTAGTTATCCCTA TERM 1277 1444805 - 1444780 - T 93 -11.1 -4.71318 | overlap 1444777 AACAGCAAAAAATAA GGCCCCACATC CAAA GAGGTGAGGCC TGATAGTAGTTATCC Pnuc_1374 1445937 - 1444837 - | NADH:flavin oxidoreductase/NADH oxidase Pnuc_1375 1446952 - 1446017 - | LysR family transcriptional regulator Pnuc_1376 1447105 - 1447590 + | rubrerythrin Pnuc_1377 1447652 - 1447819 + | rubredoxin-type Fe(Cys)4 protein Pnuc_1378 1447862 - 1449031 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1278 1449080 - 1449057 - T 95 -8.8 -5.38326 | opp_overlap 1449057 CCAACCAAAGAAAAA CCCGCTATCC ATTA GAGTAGCGGG TTTTTTTCAAACTGT TERM 1279 1449057 - 1449080 + T 95 -8.8 -5.42862 | opp_overlap 1449057 CCAACCAAAGAAAAA CCCGCTATCC ATTA GAGTAGCGGG TTTTTTTCAAACTGT Pnuc_1379 1449935 - 1449111 - | hypothetical protein TERM 1280 1450066 - 1450033 - R 100 -15.5 -4.67038 | GTCTTAAAAGCAAAA TTGACTTCAACCTGG AGAT CTAGGTTGAAGTCAA AATGAACTGAACAAT Pnuc_1380 1450910 - 1450095 - | hypothetical protein TERM 1281 1450352 - 1450365 + g 86 -4.5 -5.49569 | overlap 1450351 TCTGACCACTGGAAG TGGTG GGTC CGCCA TTTTTTGTATTAATA Pnuc_1381 1453265 - 1450986 - | type II and III secretion system protein Pnuc_1382 1453485 - 1454315 + | DSBA oxidoreductase TERM 1282 1454334 - 1454372 + T 100 -12.6 -5.00616 | opp_overlap 1454338, overlap 1454337 TTAATTAAGCCCAGT TAAATTTCTCACCATCTC CCG GGGATGGTGAGAAAAATA TTTTTTACACGAAGC TERM 1283 1454337 - 1454369 + T 95 -14.3 -3.07655 | opp_overlap 1454338, overlap 1454334 ATTAAGCCCAGTTAA ATTTCTCACCATCTC CCG GGGATGGTGAGAAAA ATATTTTTTACACGA TERM 1284 1454368 - 1454338 - T 100 -15.6 -3.66874 | opp_overlap 1454337 1454334 TTAAGCCCAGTTAAA TTTCTCACCATCTC CCG GGGATGGTGAGAAA AATATTTTTTACACG Pnuc_1383 1454998 - 1454342 - | hypothetical protein TERM 1285 1455064 - 1455035 - R 100 -17.3 -4.15657 | opp_overlap 1455041, overlap 1455041 CCAGAACGATAGAAA CAAAAAGGCCCGC AGTA GCGGGCCTTTTTA GTAACGCTTATGCTG TERM 1286 1455058 - 1455041 - R 100 -14.1 -5.42975 | opp_overlap 1455041, overlap 1455035 CGATAGAAACAAAAA GGCCCGC AGTA GCGGGCC TTTTTAGTAACGCTT TERM 1287 1455041 - 1455058 + r 100 -14.1 -4.73388 | opp_overlap 1455041 1455035 CGATAGAAACAAAAA GGCCCGC AGTA GCGGGCC TTTTTAGTAACGCTT Pnuc_1384 1455679 - 1455086 - | hypothetical protein Pnuc_1385 1456291 - 1455713 - | superoxide dismutase TERM 1288 1456488 - 1456464 - R 100 -14.3 -4.62475 | ATTTACAAATGAAAA CGCCAAGTGAC CTT GCCACCTGGCG CTCAAATCCTGCTAA Pnuc_1386 1457289 - 1456513 - | 3-hydroxybutyrate dehydrogenase TERM 1289 1456822 - 1456840 + g 80 -7.3 -4.66938 | overlap 1456823 AACGATGCCGTGTTT TGCCGCG ACATA CGCGGCC TTTTGTGTTGACGCT TERM 1290 1456823 - 1456839 + g 77 -10.8 -3.3944 | overlap 1456822 ACGATGCCGTGTTTT GCCGCG ACATA CGCGGC CTTTTGTGTTGACGC Pnuc_1387 1457848 - 1457345 - | hypothetical protein TERM 1291 1457802 - 1457785 - G 90 -6.9 -5.40474 | ATGCGCTTAAAAAAA CAGCGGG CAAT CCCACCG AAGGCATTTCAAACC Pnuc_1388 1458051 - 1459220 + | acyl-CoA dehydrogenase domain-containing protein TERM 1292 1460036 - 1460050 + G 72 -6.4 -4.25848 | overlap 1460037 TGAAAAATCAGCACT TGCTCA AGA TGAGCG TTTTGATAAAAACTT Pnuc_1389 1459233 - 1460417 + | L-carnitine dehydratase/bile acid-inducible protein F cls 1461892 - 1460414 - | cardiolipin synthetase Pnuc_1391 1462641 - 1461889 - | endonuclease/exonuclease/phosphatase Pnuc_1392 1462909 - 1463604 + | binding-protein-dependent transport systems inner membrane component TERM 1293 1464223 - 1464238 + G 95 -11.8 -4.19746 | opp_overlap 1464223 CGAGGTAAAAGAAAA GGGGCC CGTG GGCCCC TTCTTTTCCAATCCA TERM 1294 1464238 - 1464223 - g 100 -11.8 -5.10933 | opp_overlap 1464223 CGAGGTAAAAGAAAA GGGGCC CGTG GGCCCC TTCTTTTCCAATCCA Pnuc_1393 1463597 - 1464304 + | ABC transporter related Pnuc_1394 1464616 - 1464305 - | hypothetical protein Pnuc_1395 1465682 - 1464621 - | formate dehydrogenase, gamma subunit Pnuc_1396 1465966 - 1465730 - | hypothetical protein Pnuc_1397 1466622 - 1465966 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnuc_1398 1469628 - 1466650 - | molybdopterin oxidoreductase TERM 1295 1467692 - 1467719 + g 75 -9.8 -3.56643 | opp_overlap 1467690 AATGTCGCAACCATT CTCATGTGCGCT TTTA AGCGCTCAGGAG TTTGGCCGGTGTAAC Pnuc_1399 1470683 - 1470033 - | cytoplasmic chaperone TorD family protein Pnuc_1400 1472770 - 1470680 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1296 1470769 - 1470759 - G 79 -8.2 -4.30576 | GCTGGACCAGCAAAA GCGC CAT GCGC TCCCAACTTCGCCAG TERM 1297 1472714 - 1472733 + g 72 -10.8 -2.78891 | overlap 1472711 CACTGGAACTCCTAA TGCCTTTG CATC CAAAGGCA TCGTTCCATTGCAGT Pnuc_1401 1473336 - 1472782 - | hypothetical protein Pnuc_1402 1473869 - 1473336 - | hypothetical protein Pnuc_1403 1474964 - 1473876 - | hypothetical protein Pnuc_1404 1476113 - 1475103 - | phosphate transporter TERM 1298 1475973 - 1475955 - G 80 -6.7 -4.82855 | gap 1, opp_overlap 1475953 1475955 CAGGAAATTGAAAAA GGCAG-CG AATA CGACTGCC TGTTGTGGCTTTAGA Pnuc_1405 1476772 - 1476125 - | hypothetical protein Pnuc_1406 1477034 - 1476840 - | heavy metal transport/detoxification protein Pnuc_1407 1477086 - 1479362 + | heavy metal translocating P-type ATPase Pnuc_1408 1480191 - 1479379 - | hypothetical protein Pnuc_1409 1480239 - 1481720 + | glycosyltransferase Pnuc_1410 1481785 - 1482828 + | hypothetical protein Pnuc_1411 1482847 - 1484106 + | glycosyl transferase family protein Pnuc_1412 1484112 - 1484903 + | phosphoesterase, PA-phosphatase related Pnuc_1413 1484910 - 1485779 + | hypothetical protein Pnuc_1414 1486350 - 1485787 - | SOUL heme-binding protein TERM 1299 1486294 - 1486310 + g 75 -3 -5.24129 | overlap 1486309 TGGCGCATATGATCT CAATTC AAATG GGATTG TTTTTTCTAGAACAG Pnuc_1415 1487363 - 1486419 - | muramoyltetrapeptide carboxypeptidase TERM 1300 1487296 - 1487311 + g 75 -3.2 -5.14563 | opp_overlap 1487293 1487297, overlap 1487297 CCCTCAAGCCAAGCA ATCCCT GCTA AGGGAC TTTTTTCATCCAAGC Pnuc_1416 1487818 - 1487360 - | CMP/dCMP deaminase, zinc-binding Pnuc_1417 1488283 - 1487819 - | putative 6-pyruvoyl tetrahydropterin synthase Pnuc_1418 1488971 - 1488318 - | radical SAM domain-containing protein Pnuc_1419 1489737 - 1489000 - | hypothetical protein TERM 1301 1489302 - 1489251 - G 73 -10.2 -3.05384 | opp_overlap 1489251, overlap 1489268 TCCTCTCCCATTCAA TTGCCTTGATATTCAAACCCCAGT AGTA ACTGGAGTCTGGATAACCAGGCAC TTGGTAACGGGTTCG Pnuc_1420 1491665 - 1489767 - | radical SAM domain-containing protein Pnuc_1421 1492472 - 1491675 - | hypothetical protein guaA 1494102 - 1492495 - | bifunctional GMP synthase/glutamine amidotransferase protein Pnuc_1423 1495602 - 1494139 - | inositol-5-monophosphate dehydrogenase TERM 1302 1495144 - 1495157 + g 73 -4.5 -4.77438 | TACCAAGCGCTCGCG CGGAG TCAT CTTCG TTTTTACTGGTGCGT Pnuc_1424 1495979 - 1495629 - | hypothetical protein TERM 1303 1495659 - 1495695 + g 78 -6.5 -4.62872 | overlap 1495649 1495649 CCTTCTTTTGGCTGC GGCAGCCTGGAATTTGG CAT CCTGATTCTGGTTTGCC TTTTTACGCCTTACT Pnuc_1425 1496403 - 1495972 - | cyclase/dehydrase smpB 1496429 - 1496881 + | SsrA-binding protein TERM 1304 1496969 - 1496950 - f 73 -7.9 -3.80114 | overlap 1496941 1496945 CATTAATGCACTAAA TTGGTGC AATATA GCACCAA GCTGCTTCAATTCAC Pnuc_1427 1497022 - 1498434 + | hypothetical protein Pnuc_1428 1498448 - 1499425 + | hypothetical protein Pnuc_1429 1499444 - 1500241 + | transglutaminase domain-containing protein TERM 1305 1501157 - 1501146 - g 83 -2.2 -5.79595 | overlap 1501150 TGTTAAAACAAAAAA GAAG CCGG CCTC AAAAACCAGATCTAA Pnuc_1430 1500298 - 1501176 + | hypothetical protein TERM 1306 1501255 - 1501238 - f 89 -9.9 -4.14511 | opp_overlap 1501225 AACTGCACCCCAAAA GTTGGAC ATCC GTCCAAC CTAATCAGGTGCAGT TERM 1307 1501693 - 1501711 + G 90 -13.2 -3.57144 | opp_overlap 1501691 1501689 TTACGCATGAAGAGT TACTGCGC AAA GCGCAGTA TTTGGAAGTGGAGAA Pnuc_1431 1501275 - 1501808 + | ISPsy8, transposase OrfA TERM 1308 1501900 - 1501860 - g 95 -12 -4.17089 | overlap 1501883 CCCAAATGCCTAAAA GCGTGTATTACTACTGGC AAAAA GCCAGTAGTAATACTGAC CCCCATGCCAATGCC TERM 1309 1501900 - 1501883 - g 78 -6.3 -4.60487 | overlap 1501860 TACTACTGGCAAAAA GCCAGTA GTAA TACTGAC CCCCATGCCAATGCC TERM 1310 1502626 - 1502582 - g 100 -10.8 -5.33405 | overlap 1502588 CGGATCAAACAAAAA CTAAAAGGATTGAGTCCGGT GCAAT ACCGAACTCAATCCCTCGTG CTAACCTAGCTAAAC TERM 1311 1502620 - 1502588 - g 100 -17.2 -4.88326 | overlap 1502582 AAACAAAAACTAAAA GGATTGAGTCCGGT GCAAT ACCGAACTCAATCC CTCGTGCTAACCTAG Pnuc_1432 1501823 - 1502635 + | integrase catalytic subunit Pnuc_1433 1505124 - 1502719 - | phosphoenolpyruvate synthase TERM 1312 1504338 - 1504351 + g 73 -4.5 -4.74504 | TAGAGCCTAAAGCAC GGCGA ATAA TTGCC TTTTTACCTTGAGCT Pnuc_1434 1505231 - 1506058 + | hypothetical protein Pnuc_1435 1507374 - 1506073 - | secretory lipase Pnuc_1436 1508241 - 1507417 - | tRNA/rRNA methyltransferase (SpoU) Pnuc_1437 1508837 - 1508247 - | ribonuclease H Pnuc_1438 1510039 - 1508834 - | lipid-A-disaccharide synthase Pnuc_1439 1510850 - 1510053 - | UDP-N-acetylglucosamine acyltransferase Pnuc_1440 1511299 - 1510850 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ lpxD 1512413 - 1511346 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 1313 1512370 - 1512350 - G 76 -5.3 -4.84363 | overlap 1512351 1512352 CTAAACCATTAAAAA CTGTGGAGG CTT CCCCCACCA AGCTTGCTTGAAACT Pnuc_1442 1512946 - 1512419 - | outer membrane chaperone Skp (OmpH) TERM 1314 1512993 - 1512971 - R 87 -8.4 -4.56133 | overlap 1512965 1512972 CTTGAACAATTAAAA CGCTGTTCCA ACC TGGAACTGCA AACGTTGAATGTTAT TERM 1315 1512992 - 1512972 - R 75 -9.7 -3.32957 | overlap 1512965 1512971 TTGAACAATTAAAAC GCTGTTCCA ACC TGGAACTGC AAACGTTGAATGTTA Pnuc_1443 1515241 - 1512965 - | surface antigen (D15) TERM 1316 1514472 - 1514482 + g 86 -4 -5.63103 | GCCAGACGAACATCC TTCA CCG TGAA TTTTTTTCCTTCACG Pnuc_1444 1516443 - 1515310 - | putative membrane-associated zinc metalloprotease TERM 1317 1515549 - 1515539 - G 87 -6.8 -5.16472 | opp_overlap 1515541, overlap 1515541 AAAAATGCCAAAAAA GGCT GCC AGCC AACCTGTGCAGTCTT TERM 1318 1516320 - 1516306 - G 75 -2.8 -5.1287 | TTGATAGGTAAAAAA GGGTTT ACC AAAGCC AATCGAAAATCTCAG Pnuc_1445 1517649 - 1516465 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1319 1516670 - 1516653 - G 71 -9.9 -3.14344 | opp_overlap 1516656 CATTCGCGGCATTAA GTACTGC CGGA GCAGTAC CGCCAGCTTTGGCTG Pnuc_1446 1518476 - 1517649 - | phosphatidate cytidylyltransferase Pnuc_1447 1519279 - 1518506 - | undecaprenyl diphosphate synthase Pnuc_1448 1519864 - 1519304 - | ribosome recycling factor pyrH 1520586 - 1519876 - | uridylate kinase TERM 1320 1520726 - 1520699 - R 100 -15 -5.00923 | AAAGATCAAAGAAAA GGGCACAGAAAC TAAG GTTTCTATGCCC TTGGGATACTGCCAG Pnuc_1450 1521667 - 1520783 - | translation elongation factor Ts TERM 1321 1520981 - 1520971 - G 80 -6.8 -4.67607 | opp_overlap 1520969 1520971 GGTTCAACAAAGAAA CCTC TTT GAGG TATTTCTGAATAGAA TERM 1322 1521250 - 1521240 - G 74 -6.8 -4.32034 | TTACTACCAGTAAAA CGCT TGA AGCG ACGTGGCATGATGTT Pnuc_1451 1522416 - 1521667 - | ribosomal protein S2 TERM 1323 1522231 - 1522221 - G 82 -5.4 -5.12172 | TACCAACAAACAAAA TCGT GCC ACGA TTAGAAGCAACTTGT TERM 1324 1522273 - 1522283 + g 76 -4 -5.055 | opp_overlap 1522273 CAGGGCATCCTGAAA CATT GGC AATG TTTTTTCCAAGTTGA TERM 1325 1522727 - 1522712 - g 76 -4 -4.95155 | gap 1, overlap 1522714 TTTACAGCAGAAAAA GACATCC TAG GGATG-C GTGAGGCCGGCCGTT TERM 1326 1522726 - 1522714 - g 73 -7.7 -4.09649 | overlap 1522712 TACAGCAGAAAAAGA CATCC TAG GGATG CGTGAGGCCGGCCGT Pnuc_1452 1522685 - 1523521 + | methionine aminopeptidase, type I TERM 1327 1523653 - 1523639 - g 71 -3.6 -4.76213 | AGAAAGCTAACAAAA CAACTT TCT AAGTTA GGCGATCAACTCTTG TERM 1328 1523993 - 1524021 + G 81 -3.9 -5.40072 | opp_overlap 1524020 AAAGAATTTGCTGGC GCTTTTGAATC AGCTATG GATCCGAAAGC TTTTTTTCAAGCAAA Pnuc_1453 1523525 - 1526122 + | PII uridylyl-transferase TERM 1329 1526171 - 1526143 - T 73 -8.4 -3.6682 | gap 1, opp_overlap 1526151, overlap 1526125 1526151 TTTTATTTAGCTAAA TAAAAAAACCACC CTAG GGTGG-TTTTTTA CTGCTTCATGTAAAA TERM 1330 1526151 - 1526164 + T 91 -8.1 -5.2189 | opp_overlap 1526143 1526151 AGCTAAATAAAAAAA CCACC CTAG GGTGG TTTTTTACTGCTTCA TERM 1331 1526164 - 1526151 - T 100 -8.1 -5.96894 | opp_overlap 1526151, overlap 1526143 AGCTAAATAAAAAAA CCACC CTAG GGTGG TTTTTTACTGCTTCA Pnuc_1454 1526610 - 1526200 - | DoxX family protein Pnuc_1455 1528669 - 1526654 - | DNA ligase, NAD-dependent TERM 1332 1527771 - 1527753 - G 79 -7.4 -4.52589 | GCCCTGGATACAAAA CCGAGC TTAGCTT GCTCGG CAAATGAGTTGACCT Pnuc_1456 1529737 - 1528679 - | ZipA, C-terminal FtsZ-binding region Pnuc_1457 1533277 - 1529756 - | chromosome segregation protein SMC TERM 1333 1530938 - 1530958 + g 80 -9.7 -3.85389 | opp_overlap 1530938 1530936 1530941, overlap 1530941 CTCTTGAGCGAAAGA CAACGCCTC TTG GAGGCCTTG TTTAGATTCTTCAGA TERM 1334 1530958 - 1530938 - G 73 -9.7 -3.40597 | opp_overlap 1530938 1530941, overlap 1530936 1530941 CTCTTGAGCGAAAGA CAACGCCTC TTG GAGGCCTTG TTTAGATTCTTCAGA TERM 1335 1531476 - 1531488 + g 79 -10.5 -3.61103 | ACAGATGTTAATCGT GCGCC ACC GGCGC TTTGCACTCGACTTA TERM 1336 1531668 - 1531683 + g 79 -10.4 -3.60971 | AAAACGGATTCCAGC GCGGCT TCCC AGCCGC TTTCAACCTTCAGCT Pnuc_1458 1533452 - 1534279 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Pnuc_1459 1534290 - 1535441 + | succinyl-diaminopimelate desuccinylase TERM 1337 1535755 - 1535772 + G 78 -5.5 -4.82901 | ATCTTGGGCGAAGCT TGGCTCA TGGG TGTGCCA TTTTTCTGCAGCGAG Pnuc_1460 1535479 - 1536375 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Pnuc_1461 1537752 - 1536388 - | DNA repair protein RadA Pnuc_1462 1538316 - 1537807 - | hypothetical protein TERM 1338 1537889 - 1537899 + g 73 -2.4 -5.1166 | opp_overlap 1537880 1537877 AAATCAGCAGCTCTA GCTG CAG CCGC TTTTTGCTTTTCATC TERM 1339 1538293 - 1538274 - G 82 -7.2 -4.91109 | TGGCTATCAGAAAAA CTCCAAGA AATA TCTTGAAG CGAAGAGAAAGACTC Pnuc_1463 1540256 - 1538313 - | K+ potassium transporter TERM 1340 1539247 - 1539228 - G 95 -12.2 -3.86015 | opp_overlap 1539225 CATGCGTGGTACAAA GCCAAGCA AAAT TGCTTGGC TGGTCATTGAAAAAG TERM 1341 1540521 - 1540503 - R 83 -11.8 -3.20703 | opp_overlap 1540503, overlap 1540518 AGAATTACGTACTAA GCCCTTAA TTA TTAAGGGC TTTTTGCTTTTCTGG TERM 1342 1540503 - 1540521 + r 100 -11.8 -5.1417 | opp_overlap 1540503 1540518 AGAATTACGTACTAA GCCCTTAA TTA TTAAGGGC TTTTTGCTTTTCTGG TERM 1343 1540548 - 1540563 + r 89 -10.4 -4.16921 | opp_overlap 1540518 1540548 CTGGGCAATAAAAAA GCCCGT AAAG ACGGGC TTTTCAAACTTATTA TERM 1344 1540563 - 1540548 - R 100 -10.4 -5.4505 | opp_overlap 1540548, overlap 1540518 CTGGGCAATAAAAAA GCCCGT AAAG ACGGGC TTTTCAAACTTATTA Pnuc_1464 1540957 - 1540586 - | hypothetical protein Pnuc_1465 1543411 - 1541006 - | DNA internalization-related competence protein ComEC/Rec2 TERM 1345 1541294 - 1541281 - G 76 -5.3 -4.82901 | GTGGTGCCATAAAAA TGATC TCGC GATCA CCAATTTGATTCAAT TERM 1346 1542670 - 1542657 - G 77 -3.7 -5.24129 | overlap 1542666 CGTCGCCAGAAAAAA GCAGC AAAC GCAGC CCCTACACCAGCTAA TERM 1347 1543000 - 1543016 + g 71 -7.2 -4.13183 | overlap 1543008 AAGTATGCGGATTCA GCGCTC CATAA GGGCGC TTTAGTTTGGCTTTT TERM 1348 1543455 - 1543444 - R 76 -3.6 -5.26119 | GTGGCAAAAAGAAAA GGAG CGAG CCCC CGGCGATAAACGCCG Pnuc_1466 1544327 - 1543491 - | TatD-related deoxyribonuclease Pnuc_1467 1545037 - 1544339 - | ABC transporter related Pnuc_1468 1546292 - 1545030 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 1349 1546100 - 1546088 - G 71 -7.7 -3.95378 | CCACATGCGAAAGAA CGGAT AGC ATCCG ATCGCGTACATCCTT Pnuc_1469 1546339 - 1547319 + | hypothetical protein TERM 1350 1547804 - 1547827 + G 75 -11.1 -3.01712 | overlap 1547792 GGAGGTCATTGTTAC CGATCACCA TTTACC TGGTGATCG TCTTCCAAAAGCAAC Pnuc_1470 1547316 - 1549076 + | single-stranded-DNA-specific exonuclease RecJ Pnuc_1471 1549166 - 1550215 + | peptide chain release factor 2 TERM 1351 1551363 - 1551337 - g 100 -8.1 -5.1925 | gap 1, opp_overlap 1551362, overlap 1551349 GCAGAATTGAAAAAA GGTGGTGAGAAT CCAG ATTCCC-CCACC CTCAAGAATGCGGGT Pnuc_1472 1550254 - 1551798 + | lysyl-tRNA synthetase TERM 1352 1551893 - 1551880 - T 93 -8.1 -5.40464 | opp_overlap 1551880 GAGCATAAAGAAAAA CCACC CGTA GGTGG TTTTAATAACGCCTT TERM 1353 1551880 - 1551893 + T 77 -8.1 -4.25848 | opp_overlap 1551880 GAGCATAAAGAAAAA CCACC CGTA GGTGG TTTTAATAACGCCTT Pnuc_1473 1552774 - 1552268 - | hypothetical protein Pnuc_1474 1553283 - 1552792 - | OmpA/MotB domain-containing protein TERM 1354 1553268 - 1553244 - G 70 -2.1 -5.07523 | opp_overlap 1553247 1553248 1553250, overlap 1553248 CAGACATAAATAAAA CCAATATTGCC AAA GGCAATACTTT TACAAATTTAAACAT TERM 1355 1553248 - 1553264 + g 70 -9.5 -3.09772 | opp_overlap 1553244 1553248, overlap 1553247 1553250 CATAAATAAAACCAA TATTGCC AAA GGCAATA CTTTTACAAATTTAA TERM 1356 1553264 - 1553248 - G 80 -9.5 -3.90741 | opp_overlap 1553248 1553247 1553250, overlap 1553244 CATAAATAAAACCAA TATTGCC AAA GGCAATA CTTTTACAAATTTAA Pnuc_1475 1553721 - 1553368 - | hypothetical protein TERM 1357 1553868 - 1553840 - R 70 -9.7 -2.71712 | opp_overlap 1553846 1553848, overlap 1553848 CCTCTGCCGCTAAAG CTAAAAAAGAGCC AAA GGCCCTCTTTTAA ATTTTGACTATCTGG TERM 1358 1553860 - 1553848 - R 89 -6.9 -5.22039 | opp_overlap 1553846 1553848, overlap 1553840 GCTAAAGCTAAAAAA GAGCC AAA GGCCC TCTTTTAAATTTTGA Pnuc_1476 1554903 - 1553929 - | cysteine synthase A TERM 1359 1554717 - 1554729 + g 77 -3.3 -5.20333 | CCAGTTCTTTGCCTG GGCCT AAG AGACC TTTTTCTTGTGCATC Pnuc_1477 1555082 - 1555627 + | peptide deformylase Pnuc_1478 1556122 - 1555643 - | disulphide bond formation protein DsbB Pnuc_1479 1556274 - 1557050 + | ferredoxin--NADP(+) reductase TERM 1360 1557092 - 1557118 + F 70 -8.9 -3.14581 | opp_overlap 1557090 1557087, overlap 1557090 1557088 AGTAATTTAAGTATC GCTATATATTC CTTGT GGATATATAGC TATCTTGGTAAATTG Pnuc_1480 1557351 - 1558145 + | hypothetical protein TERM 1361 1558528 - 1558511 - g 80 -5.5 -5.09173 | overlap 1558501 GAACAGCCTAAAAAA GCGTGTT GTGG AGCACGC AAAATTAAACCTTTG Pnuc_1481 1558142 - 1558870 + | adenylylsulfate reductase, thioredoxin dependent TERM 1362 1559346 - 1559331 - g 75 -3.2 -5.1356 | opp_overlap 1559335 CGTGATGAAGAAAAA GCTCGT GCTA AAGAGC GCATCTTCTCGTTCC Pnuc_1482 1558893 - 1559816 + | sulfate adenylyltransferase subunit 2 Pnuc_1483 1559816 - 1561159 + | sulfate adenylyltransferase, large subunit TERM 1363 1561183 - 1561200 + F 100 -11.3 -5.46657 | opp_overlap 1561180 1561183 AACGGAACTGAACGA GCCCCAT CTTG ATGGGGC TTTTTTATTGAACTA TERM 1364 1561200 - 1561183 - f 80 -11.3 -2.79456 | opp_overlap 1561183, overlap 1561180 AACGGAACTGAACGA GCCCCAT CTTG ATGGGGC TTTTTTATTGAACTA Pnuc_1484 1561263 - 1562474 + | hypothetical protein Pnuc_1485 1562520 - 1562876 + | hypothetical protein TERM 1365 1562911 - 1562892 - T 100 -13.6 -5.42862 | opp_overlap 1562892 ATATCTTTAAAAAAA GCCGCTCT ATTA AGAGCGGC TTTTTTGTTTGATCA TERM 1366 1562892 - 1562911 + T 100 -13.6 -5.68438 | opp_overlap 1562892 ATATCTTTAAAAAAA GCCGCTCT ATTA AGAGCGGC TTTTTTGTTTGATCA Pnuc_1486 1563243 - 1562932 - | cytochrome c, class I Pnuc_1487 1564474 - 1563254 - | oxidoreductase, molybdopterin binding TERM 1367 1564619 - 1564604 - R 100 -10.4 -5.45802 | TGTCCAAAAGAAAAA CCACCC CGGA GGGTGG CTTAAAAGATTTTTT Pnuc_1488 1565079 - 1564741 - | ferredoxin, 2Fe-2S type, ISC system Pnuc_1489 1566975 - 1565110 - | Fe-S protein assembly chaperone HscA TERM 1368 1566002 - 1566015 + g 70 -2.4 -5.02074 | opp_overlap 1566002 TCTGCTTTTAAACCA GCAT CGCGTA ATGC TTTTTTGCAGGCTAC Pnuc_1490 1567531 - 1567004 - | co-chaperone Hsc20 Pnuc_1491 1567832 - 1567509 - | iron-sulfur cluster assembly protein IscA TERM 1369 1567691 - 1567673 - G 89 -8.8 -4.66609 | opp_overlap 1567672 CATTGGACTCAAAAA CCTGATCC TCA GGAGCAGG CTCATCTACGTATTC Pnuc_1492 1568237 - 1567851 - | FeS cluster assembly scaffold IscU TERM 1370 1568210 - 1568220 + g 74 -6.8 -4.26188 | GGGGGTTTTCATAGT GGTC AAT GACC TTTTCGCTATATGCC Pnuc_1493 1569529 - 1568270 - | cysteine desulfurase IscS Pnuc_1494 1570128 - 1569559 - | BadM/Rrf2 family transcriptional regulator Pnuc_1495 1572421 - 1570265 - | excinuclease ABC subunit B TERM 1371 1572132 - 1572103 - G 93 -10.1 -4.57073 | gap 1 TATTTGGGGCAAAAA TGATGGCT-GGACG CCC CGTCCTAGCGATCA CATTAGCCATCGTGA Pnuc_1496 1572581 - 1573780 + | aromatic amino acid aminotransferase TERM 1372 1574055 - 1574075 + G 79 -11.3 -3.4052 | opp_overlap 1574050 CATGAAAGAACGGCT GTTGCAAAA CCG TTTTGCAAC TTAGTTCGCTTCAAG TERM 1373 1574529 - 1574502 - g 72 -2.8 -5.08601 | opp_overlap 1574502 TTAGCCGAACAAAAA TCACATGAGT GGTTTGAG AGTCATGTGA TTTATAACGTGCCAC TERM 1374 1575096 - 1575072 - g 75 -6.3 -4.46652 | overlap 1575073 CAAAGAAAAACCAAA GCGCGCCTACC AAA GTTAGACGCGA AGTAAATCAAGATAA TERM 1375 1575095 - 1575073 - g 71 -9.8 -3.25551 | overlap 1575072 AAAGAAAAACCAAAG CGCGCCTACC AAA GTTAGACGCG AAGTAAATCAAGATA Pnuc_1497 1573812 - 1575101 + | polyhydroxyalkanoate depolymerase, intracellular TERM 1376 1575142 - 1575103 - f 71 -7.3 -3.92625 | opp_overlap 1575112, overlap 1575112 TAGACGCGAAGTAAA TCAAGATAATGAGAGAC CTCAGC GTCTCTCATTTACTTAA GACCCACTGATTGAT TERM 1377 1575133 - 1575112 - f 77 -8.8 -3.80697 | opp_overlap 1575112, overlap 1575103 AGTAAATCAAGATAA TGAGAGAC CTCAGC GTCTCTCA TTTACTTAAGACCCA TERM 1378 1575112 - 1575133 + F 77 -8.8 -3.90112 | opp_overlap 1575103 1575112 AGTAAATCAAGATAA TGAGAGAC CTCAGC GTCTCTCA TTTACTTAAGACCCA TERM 1379 1575456 - 1575444 - g 78 -6.3 -4.60041 | opp_overlap 1575443, overlap 1575448 ATTGACCCCCAAAAA TGCAT TGG ATGCA CCTTATGCATTCAAG TERM 1380 1575805 - 1575792 - g 77 -3.7 -5.17786 | GAAGAAAATGAAAAA GAGCG TAAG CGCGC CATTATTGCTGCAGC Pnuc_1498 1575156 - 1575848 + | electron transport complex, RnfABCDGE type, B subunit TERM 1381 1575861 - 1575871 + G 70 -2.4 -5.03145 | TGATGAACTTAGAAA AGCG CCG CGCA TTTTTTGAGCAGTTA Pnuc_1499 1575845 - 1576504 + | endonuclease III TERM 1382 1576574 - 1576558 - g 77 -3.7 -5.26119 | CCTGGAAAAAGAAAA CAGAAAA TCA TATTCTG GATCCTATGGAAACC Pnuc_1500 1576491 - 1576922 + | hypothetical protein Pnuc_1501 1577327 - 1576926 - | hypothetical protein Pnuc_1502 1578496 - 1577324 - | acetyl-CoA acetyltransferase TERM 1383 1577481 - 1577501 + g 72 -8.2 -3.67597 | ATGACTTTAGTCATT CCACCACG ATTAG CGGGGTGG TTGTTGCATAAGCCC TERM 1384 1578400 - 1578390 - G 74 -6.8 -4.21974 | CCAGCATCCAATAAA GCAC CGC GTGC TACCTCGGCATGAAG Pnuc_1503 1579182 - 1578520 - | 3-oxoacid CoA-transferase, B subunit Pnuc_1504 1579850 - 1579179 - | 3-oxoacid CoA-transferase, A subunit TERM 1385 1579797 - 1579787 - G 74 -5.4 -4.564 | AACCTGAAACCAAAA TGGT TGA ACCA CTGGCAATATCCCGC Pnuc_1505 1580358 - 1579918 - | histidine triad (HIT) protein TERM 1386 1580417 - 1580379 - R 100 -16.9 -4.5852 | opp_overlap 1580390 1580393 GAATGTAAACGAAAA CGGCATCTAAGTCACCC TTGTG GGGTAATTTAGATGCCG CGGCAGTATGGGTAC Pnuc_1506 1581763 - 1580465 - | isocitrate lyase TERM 1387 1581709 - 1581724 + g 84 -7.6 -4.84359 | opp_overlap 1581696, overlap 1581700 TACCTTTCCAGCGTG GATTGG TGTC CCAATC TTTTTGTAACGCTGC Pnuc_1507 1583271 - 1582036 - | major facilitator transporter Pnuc_1508 1584271 - 1583303 - | hypothetical protein TERM 1388 1583410 - 1583422 + g 71 -3.3 -4.83615 | GACTCAAATCCAATC CTTGC GCA GCCAG TTTTTCTCGAACCTC TERM 1389 1584059 - 1584071 + g 77 -9.1 -3.88946 | GGTTCCAATATTGCC GCCAG CAC CTGGC TTGTTCTCTACGATC Pnuc_1509 1585584 - 1584283 - | TRAP transporter solute receptor TAXI family protein Pnuc_1510 1586821 - 1585634 - | TPR repeat-containing protein TERM 1390 1586232 - 1586220 - G 84 -7.7 -4.82901 | opp_overlap 1586220, overlap 1586222 GGCTTGCCAGAAAAA TTGCC ATT GGCAA TGGTTGCCAAGGTAT Pnuc_1511 1587300 - 1586818 - | cytochrome C biogenesis protein Pnuc_1512 1587827 - 1587297 - | periplasmic protein thiol--disulphide oxidoreductase DsbE Pnuc_1513 1589743 - 1587824 - | cytochrome c-type biogenesis protein CcmF Pnuc_1514 1590174 - 1589740 - | CcmE/CycJ protein Pnuc_1515 1590359 - 1590171 - | heme exporter protein D (CcmD) Pnuc_1516 1591129 - 1590359 - | heme exporter protein CcmC TERM 1391 1590996 - 1590981 - G 86 -3.2 -5.7946 | GGTGCAACAAAAAAA CTGACC CAAA GACCAG CAATACCGAAGAGCG Pnuc_1517 1591746 - 1591126 - | heme exporter protein CcmB TERM 1392 1591668 - 1591658 - G 71 -6.8 -4.15222 | ACCTTGCGTAATAAA GCTG CGT CAGC TCCGATACCCAAAGG Pnuc_1518 1592435 - 1591788 - | heme exporter protein CcmA TERM 1393 1592339 - 1592351 + g 72 -4.8 -4.56597 | CCTGAAAACTTAAGT CAGC AAATA GCTG TTTTTCGCCACGGAC TERM 1394 1592603 - 1592578 - R 76 -9.1 -3.79043 | opp_overlap 1592584, overlap 1592584 GAGTACGAAGGTAAA TAAAAACCACC CGAA GGTGGTTTTTC CTGAGATTGGGCTGA TERM 1395 1592597 - 1592584 - R 91 -8.1 -5.33026 | opp_overlap 1592584, overlap 1592578 GAAGGTAAATAAAAA CCACC CGAA GGTGG TTTTTCCTGAGATTG TERM 1396 1592584 - 1592597 + r 84 -8.1 -4.74801 | opp_overlap 1592584 1592578 GAAGGTAAATAAAAA CCACC CGAA GGTGG TTTTTCCTGAGATTG Pnuc_1519 1593216 - 1592641 - | YceI family protein TERM 1397 1592987 - 1592967 - G 73 -4 -4.78107 | opp_overlap 1592969, overlap 1592957 TATGACTATTAAAAA CAGTTGAT CCAGT ATCGACTG ACTTGGTGTCAATAG Pnuc_1520 1593846 - 1593268 - | YceI family protein Pnuc_1521 1594381 - 1593833 - | cytochrome B561 Pnuc_1522 1594935 - 1594381 - | putative flavodoxin Pnuc_1523 1595385 - 1594972 - | MarR family transcriptional regulator TERM 1398 1595205 - 1595219 + g 72 -6.4 -4.37092 | CACCGGTCAAAGTTC CCTTAG TAA CTAGGG TTTTCTCGCCCAACT TERM 1399 1595477 - 1595459 - R 95 -4.5 -5.75342 | opp_overlap 1595459 1595460, overlap 1595460 GCGGGTCAAAAAAAA TCCCACA ATAAA TGTGGGG TTTTAGCTTCAATCC TERM 1400 1595459 - 1595477 + r 73 -6.7 -4.28774 | opp_overlap 1595459 1595460, overlap 1595460 GCGGGTCAAAAAAAA TCCCACA ATAAA TGTGGGG TTTTAGCTTCAATCC TERM 1401 1595476 - 1595460 - R 75 -8 -4.04482 | opp_overlap 1595459 1595460, overlap 1595459 CGGGTCAAAAAAAAT CCCACA ATAAA TGTGGG GTTTTAGCTTCAATC Pnuc_1524 1596359 - 1595502 - | beta-lactamase domain-containing protein TERM 1402 1595619 - 1595629 + g 78 -5.4 -4.74103 | GGAGTTGTAATGCAT TGGT ATC ACCA TTTTTGGCTTCACCC TERM 1403 1596251 - 1596271 + g 82 -11.1 -3.54543 | ATTCTGTCTTTCCCT GTGCGCCAG CAG CTGGAGCAC TTTGCGCCCCTACGT Pnuc_1525 1596961 - 1596479 - | hypothetical protein TERM 1404 1596986 - 1596969 - R 100 -14.1 -5.59534 | AACGACAATAAAAAA GCCCCGC ATTG GCGGGGC CAGGTAATACTAAGC Pnuc_1526 1597994 - 1597014 - | alcohol dehydrogenase Pnuc_1527 1598466 - 1598029 - | hypothetical protein TERM 1405 1598739 - 1598763 + G 73 -2.2 -5.12707 | gap 1 ATGCAGGAAGTCATC TCATTTG-CGC CATT GTGACGAATGA TTTTTTGCAATTTAG Pnuc_1528 1598615 - 1598989 + | hypothetical protein Pnuc_1529 1598986 - 1599885 + | histone deacetylase superfamily protein Pnuc_1530 1600430 - 1599882 - | hypothetical protein TERM 1406 1600570 - 1600539 - R 91 -11 -4.64657 | opp_overlap 1600544, overlap 1600544 TCAAAGCCCCAAAAA GAAAACCCCAGTCA TTGC TAACTGGGGTTTTA TGGCAAAAAGGCTTG TERM 1407 1600544 - 1600565 + r 85 -8.7 -4.36914 | opp_overlap 1600539 1600544 GCCCCAAAAAGAAAA CCCCAGTCA TTGC TAACTGGGG TTTTATGGCAAAAAG TERM 1408 1600565 - 1600544 - R 100 -10.9 -5.26119 | opp_overlap 1600544, overlap 1600539 GCCCCAAAAAGAAAA CCCCAGTCA TTGC TAACTGGGG TTTTATGGCAAAAAG Pnuc_1531 1601243 - 1600599 - | putative lipoprotein Pnuc_1532 1602104 - 1601289 - | hypothetical protein TERM 1409 1602192 - 1602210 + r 82 -6 -4.96848 | TGGGCAAGGCCGTTA GTATAGCT TTT AGCGATAC TTTTTATATGCAAAA Pnuc_1533 1603117 - 1602281 - | hypothetical protein TERM 1410 1602766 - 1602747 - G 74 -3.6 -5.09225 | opp_overlap 1602747 1602756 AGGGGATTTAAAAAA GTTTGG TTTTGGCC CCAAAC TGTAATAAGAGTGGG Pnuc_1534 1603307 - 1603870 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1411 1603892 - 1603909 + F 72 -9.9 -3.01924 | opp_overlap 1603889 1603892 1603894, overlap 1603894 ATCTCCAACCAATCA GACTCTC TCCG GAGAGTC TATTGGAGAGGACTA TERM 1412 1603909 - 1603892 - f 71 -9.9 -2.84276 | opp_overlap 1603892 1603894, overlap 1603889 1603894 ATCTCCAACCAATCA GACTCTC TCCG GAGAGTC TATTGGAGAGGACTA Pnuc_1535 1603971 - 1605551 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1413 1605586 - 1605605 + T 100 -12.2 -5.72053 | opp_overlap 1605586 AGTAGCAATAAAAAA CCCAGAGA TCAG TCTCTGGG TTTTTTATTTAGTTA TERM 1414 1605605 - 1605586 - T 100 -12.2 -5.52023 | opp_overlap 1605586 AGTAGCAATAAAAAA CCCAGAGA TCAG TCTCTGGG TTTTTTATTTAGTTA Pnuc_1536 1605928 - 1605662 - | hypothetical protein Pnuc_1537 1606280 - 1605975 - | hypothetical protein TERM 1415 1606374 - 1606393 + r 80 -10.8 -3.34522 | opp_overlap 1606374 GGTCTTAATAAAAAA TACCAGCT GGGA AGCTGGTA TTAGTTAAAAACTCT TERM 1416 1606393 - 1606374 - R 100 -10.8 -5.4505 | opp_overlap 1606374 GGTCTTAATAAAAAA TACCAGCT GGGA AGCTGGTA TTAGTTAAAAACTCT Pnuc_1538 1608297 - 1606426 - | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 1417 1607463 - 1607453 - G 72 -5.4 -4.47551 | ATTGAAGCTAGAAAA GCAA TCA TTGC CCTAGCCATACCGGT TERM 1418 1608253 - 1608274 + g 95 -11.7 -4.36914 | opp_overlap 1608239 1608257 AGCGCCCTTGGCTAT TGAACCAGT AGGT ACTGGTTCA TTTTCTAAGGACGGC Pnuc_1539 1609307 - 1608294 - | TRAP dicarboxylate transporter, DctP subunit TERM 1419 1608768 - 1608758 - G 73 -4.6 -4.78326 | CCTTAAATAAAGAAA CCCA CAT CGGG CCAGGAGGCGTACGT Pnuc_1540 1610235 - 1609432 - | short-chain dehydrogenase/reductase SDR Pnuc_1541 1611282 - 1610347 - | 2-dehydropantoate 2-reductase TERM 1420 1611243 - 1611232 - G 70 -2.2 -5.0133 | CATGCCTCCAAAAAA GCAA CCCA CTGC GCCTGCACCTAATAC Pnuc_1542 1612302 - 1611310 - | ferredoxin Pnuc_1543 1613909 - 1612350 - | Rieske (2Fe-2S) domain-containing protein Pnuc_1544 1614035 - 1614700 + | GntR family transcriptional regulator TERM 1421 1614732 - 1614694 - T 85 -11.2 -3.35867 | opp_overlap 1614705, overlap 1614695 1614705 CGAAGTTCTAACGAA CCATTAAAAAATCCCAGC ATA ACTGGGATTTTTTATCGA CTCTTGCACAGTTTT TERM 1422 1614731 - 1614695 - T 83 -12.5 -2.61199 | opp_overlap 1614705, overlap 1614694 1614705 GAAGTTCTAACGAAC CATTAAAAAATCCCAGC ATA ACTGGGATTTTTTATCG ACTCTTGCACAGTTT TERM 1423 1614721 - 1614705 - T 93 -8.7 -5.2189 | opp_overlap 1614705, overlap 1614695 1614694 CGAACCATTAAAAAA TCCCAGC ATA ACTGGGA TTTTTTATCGACTCT TERM 1424 1614705 - 1614721 + T 91 -8 -5.26918 | opp_overlap 1614705 1614695 1614694 CGAACCATTAAAAAA TCCCAG CATAA CTGGGA TTTTTTATCGACTCT Pnuc_1545 1615586 - 1614747 - | hypothetical protein TERM 1425 1614954 - 1614942 - G 72 -4.7 -4.62475 | AGCGATAAACCAAAA CGCGG CAG CCTCG ATACTGTGACGGCTT Pnuc_1546 1615705 - 1616631 + | LysR family transcriptional regulator TERM 1426 1616850 - 1616863 + G 70 -2.3 -5.04249 | AGATCCTGTTTATTA GTTGC CTCT GCCAC TTTATTTTTTGCGGG TERM 1427 1617006 - 1617021 + G 88 -7.6 -5.06414 | TTGGTCGCTGGAATT GGATTC TTAG GAATCC TTTTTATTGCCAGAC Pnuc_1547 1616628 - 1617497 + | hypothetical protein Pnuc_1548 1618364 - 1617501 - | alpha/beta hydrolase fold TERM 1428 1618418 - 1618389 - R 100 -16.5 -4.48987 | opp_overlap 1618393 TGTTGATAATTAAAA GCAAGACGCCGCT GAGG AGCGGCGTCTTTC TAGCAATACATGTAT TERM 1429 1618393 - 1618414 + r 100 -15.9 -3.87994 | opp_overlap 1618389 GATAATTAAAAGCAA GACGCCGCT GAGG AGCGGCGTC TTTCTAGCAATACAT Pnuc_1549 1619623 - 1618445 - | extracellular ligand-binding receptor Pnuc_1550 1621104 - 1619764 - | SAF domain-containing protein Pnuc_1551 1623810 - 1621171 - | 2-oxoacid dehydrogenase subunit E1 TERM 1430 1623874 - 1623860 - R 79 -8.6 -4.08945 | AGCACTTTGCGAAAA TCAGCT AAA AGCTGA GCTAAATAAGTAGTG Pnuc_1552 1625256 - 1623838 - | dehydrogenase catalytic domain-containing protein TERM 1431 1624315 - 1624330 + g 77 -10.4 -3.33696 | AGGGTATTTCTTTAA GGCAGC TACA GCTGCC TTAATTAGGAAAGCC TERM 1432 1625274 - 1625242 - G 72 -5.7 -4.38154 | opp_overlap 1625242 1625234 1625253 1625262, overlap 1625231 1625244 1625262 ATATTGGCTATAAAA CGCTTTTATAAGCAT AAT ATGCTTATAAATAAG CTTTTTATGGAATTT TERM 1433 1625262 - 1625275 + H 77 -5.3 -4.90296 | opp_overlap 1625244 1625242 1625262, overlap 1625253 1625242 1625234 TTATAAGCATAATAT GCTTA TAAA TAAGC TTTTTATGGAATTTT Pnuc_1553 1625291 - 1625755 + | AsnC family transcriptional regulator TERM 1434 1625758 - 1625772 + F 75 -2.8 -5.27023 | ATTACCAAAATAAGT TCACGT AAA ACATGA TTTTATTTTTAGCGT TERM 1435 1625892 - 1625873 - g 71 -3.6 -4.89339 | overlap 1625876 AATGAGTCAGAAAAA TAACAAAG TAGC CTTGGTTA CTGGAGCTGGTGTTG Pnuc_1554 1625859 - 1626620 + | short-chain dehydrogenase/reductase SDR TERM 1436 1626688 - 1626663 - T 72 -4.7 -4.78753 | opp_overlap 1626666 1626668, overlap 1626666 1626668 TTAAGATGAAGAAAA TAATGCCAACC GTCG GGTTGGTATTT TCTATACTACTAGGT TERM 1437 1626666 - 1626685 + T 87 -8.6 -4.58424 | opp_overlap 1626663 1626666 1626668, overlap 1626668 AGATGAAGAAAATAA TGCCAACC GTCG GGTTGGTA TTTTCTATACTACTA TERM 1438 1626685 - 1626666 - T 74 -6.4 -4.47491 | opp_overlap 1626666 1626668, overlap 1626663 1626668 AGATGAAGAAAATAA TGCCAACC GTCG GGTTGGTA TTTTCTATACTACTA TERM 1439 1626668 - 1626683 + T 79 -9 -3.89814 | opp_overlap 1626666 1626663 1626668, overlap 1626666 ATGAAGAAAATAATG CCAACC GTCG GGTTGG TATTTTCTATACTAC Pnuc_1555 1627874 - 1626723 - | acyl-CoA dehydrogenase domain-containing protein TERM 1440 1626907 - 1626884 - G 74 -6.8 -4.30719 | overlap 1626885 1626887 TGGCTTTAGAACAAA CTACTTCAGA CATC TCTGAAGCAA ATAATTTCGCTTGAG TERM 1441 1627538 - 1627550 + g 84 -7.7 -4.88067 | opp_overlap 1627537, overlap 1627535 CTGAAGCCAACTCAT GAAGC CAT GCTTC TTTTTGTGCCTCGCT Pnuc_1556 1628948 - 1627896 - | enoyl-CoA hydratase/isomerase TERM 1442 1628419 - 1628403 - G 70 -9.5 -3.10597 | overlap 1628402 CTCGGCAGGCAAAAT CCAATCT ACT AGATTGG CATAGAAGGCATCTT Pnuc_1557 1629866 - 1628970 - | 3-hydroxyisobutyrate dehydrogenase Pnuc_1558 1630660 - 1629884 - | enoyl-CoA hydratase/isomerase Pnuc_1559 1632172 - 1630670 - | methylmalonate-semialdehyde dehydrogenase TERM 1443 1631072 - 1631086 + g 73 -4.2 -4.8048 | opp_overlap 1631067 1631065, overlap 1631074 AGAGAAGATAGTTGG GCCAAC AAA GTTGCC TTTTTCGTATCCGAC Pnuc_1560 1632314 - 1633189 + | LysR family transcriptional regulator TERM 1444 1633237 - 1633217 - T 100 -10.4 -5.67063 | opp_overlap 1633217 GGGATCAGAAAAAAA GCCTGGCC AAATA GACCAGGC TTTTTTCGCATTAAA TERM 1445 1633217 - 1633237 + T 88 -8.2 -5.09426 | opp_overlap 1633217 GGGATCAGAAAAAAA GCCTGGCC AAATA GACCAGGC TTTTTTCGCATTAAA Pnuc_1561 1634930 - 1633260 - | major facilitator transporter Pnuc_1562 1635132 - 1637009 + | propionyl-CoA synthetase TERM 1446 1637026 - 1637070 + T 85 -8.8 -4.41348 | gap 1, opp_overlap 1637036 1637039, overlap 1637030 1637032 1637036 AACTTCAATATCGCT CTCCA-ATAAATAAGGCCCCA AGAT TGGGGTCTTATTTATATTGTG TTTATTTCAACCAAC TERM 1447 1637030 - 1637065 + T 93 -12.8 -4.02911 | opp_overlap 1637036 1637039, overlap 1637026 1637032 1637036 TCAATATCGCTCTCC AATAAATAAGGCCCCA AGAT TGGGGTCTTATTTATA TTGTGTTTATTTCAA TERM 1448 1637032 - 1637063 + T 100 -15.4 -3.58969 | opp_overlap 1637036 1637039, overlap 1637030 1637026 1637036 AATATCGCTCTCCAA TAAATAAGGCCCCA AGAT TGGGGTCTTATTTA TATTGTGTTTATTTC TERM 1449 1637036 - 1637059 + T 95 -11.8 -4.36854 | opp_overlap 1637036 1637039, overlap 1637032 1637030 1637026 TCGCTCTCCAATAAA TAAGGCCCCA AGAT TGGGGTCTTA TTTATATTGTGTTTA TERM 1450 1637059 - 1637036 - T 89 -9.6 -4.15044 | opp_overlap 1637032 1637030 1637026 1637036, overlap 1637039 TCGCTCTCCAATAAA TAAGGCCCCA AGAT TGGGGTCTTA TTTATATTGTGTTTA TERM 1451 1637056 - 1637039 - T 73 -6.9 -4.20367 | opp_overlap 1637036 1637032 1637030 1637026, overlap 1637036 CTCTCCAATAAATAA GGCCCCA AGAT TGGGGTC TTATTTATATTGTGT Pnuc_1563 1637439 - 1637095 - | hypothetical protein TERM 1452 1637554 - 1637598 + H 100 -18.3 -3.45571 | opp_overlap 1637554 1637557, overlap 1637557 1637560 CCTTCACCCTACAAA TAGGAATGGTTCTCATTAGTG GTA TATTAATGAGAACCATTCTTA TTAATATTTACCAGG TERM 1453 1637598 - 1637554 - H 100 -13.2 -3.89346 | opp_overlap 1637554 1637557 1637560, overlap 1637557 CCTTCACCCTACAAA TAGGAATGGTTCTCATTAGT GGTAT ATTAATGAGAACCATTCTTA TTAATATTTACCAGG TERM 1454 1637595 - 1637557 - H 95 -14.9 -2.71918 | opp_overlap 1637557 1637554 1637560, overlap 1637554 TCACCCTACAAATAG GAATGGTTCTCATTAGT GGTAT ATTAATGAGAACCATTC TTATTAATATTTACC TERM 1455 1637557 - 1637595 + H 100 -17.8 -3.8613 | opp_overlap 1637554 1637557, overlap 1637554 1637560 TCACCCTACAAATAG GAATGGTTCTCATTAGTG GTA TATTAATGAGAACCATTC TTATTAATATTTACC TERM 1456 1637560 - 1637592 + H 100 -13.7 -4.04071 | opp_overlap 1637557 1637554, overlap 1637557 1637554 CCCTACAAATAGGAA TGGTTCTCATTAGTG GTA TATTAATGAGAACCA TTCTTATTAATATTT Pnuc_1564 1637830 - 1638372 + | FMN-binding domain-containing protein Pnuc_1565 1638369 - 1639202 + | ApbE family lipoprotein TERM 1457 1639239 - 1639227 - g 72 -4.8 -4.57837 | ACAGTCTTGGAAAAA TGCC TACAT GGCA GCGATTGTTCACAAT Pnuc_1566 1639202 - 1639621 + | hypothetical protein Pnuc_1567 1640442 - 1639666 - | hydroxypyruvate isomerase Pnuc_1568 1640636 - 1641424 + | hypothetical protein TERM 1458 1641456 - 1641438 - T 95 -11.7 -4.37534 | AAAGTCATAGCAAAA GAGGCCC GCTTG GGGCCTC ATAAAAGAATTAGGT Pnuc_1569 1642109 - 1641480 - | hypothetical protein TERM 1459 1641586 - 1641546 - G 70 -4.8 -4.4009 | opp_overlap 1641531 1641547, overlap 1641548 GCCCACCTTAGAAAA GGCGCGGCTTTG-TGCGCTT AAT AAG-GCATCAAAACCGCTTC CAGAAACTGGTTCAC TERM 1460 1641645 - 1641663 + g 75 -3 -5.24531 | TGGTACACACTTAGT TCGGGCGC TTT GAGCTTGA TTTTTTATAACCGGT Pnuc_1570 1643725 - 1642109 - | hypothetical protein Pnuc_1571 1644368 - 1643718 - | paraquat-inducible protein A Pnuc_1572 1644991 - 1644365 - | paraquat-inducible protein A TERM 1461 1645176 - 1645201 + r 83 -9.1 -4.12188 | opp_overlap 1645182, overlap 1645182 GTATCATCCAAAATT AAAAAACCACC CGTA GGTGGTTTTTC TTTTAGCGCTAATAA TERM 1462 1645182 - 1645195 + r 93 -8.1 -5.45802 | opp_overlap 1645182, overlap 1645176 TCCAAAATTAAAAAA CCACC CGTA GGTGG TTTTTCTTTTAGCGC TERM 1463 1645195 - 1645182 - R 93 -8.1 -5.46698 | opp_overlap 1645182 1645176 TCCAAAATTAAAAAA CCACC CGTA GGTGG TTTTTCTTTTAGCGC Pnuc_1573 1645636 - 1645223 - | hypothetical protein Pnuc_1574 1647349 - 1645853 - | acetamidase/formamidase TERM 1464 1646878 - 1646889 + g 73 -4.4 -4.75472 | opp_overlap 1646878 TATTTGTTGCATAAC TTCG CATG CGAA TTTTATTAATATGCA TERM 1465 1647112 - 1647096 - G 71 -7.9 -3.98083 | GATTTAATTGATAAA GCTGGAG GTG CACCAGC GTCGAAATATCCCCA Pnuc_1575 1648050 - 1647388 - | anti-ECFsigma factor, ChrR TERM 1466 1647662 - 1647638 - G 72 -8.6 -3.727 | GGCATGACATTTAAA CCTGGCACCA TTCCT TGATACCAGG GGGCTGTTTTTGTAT TERM 1467 1648127 - 1648114 - R 100 -9.5 -5.45802 | opp_overlap 1648114, overlap 1648099 CGCTCAAAAGAAAAA CCCGC CTGA GCGGG TTTCTTTAATACCGT TERM 1468 1648114 - 1648127 + r 91 -9.5 -4.49958 | opp_overlap 1648099 1648114 CGCTCAAAAGAAAAA CCCGC CTGA GCGGG TTTCTTTAATACCGT Pnuc_1576 1649282 - 1648161 - | choloylglycine hydrolase TERM 1469 1648861 - 1648843 - G 70 -2.5 -4.95155 | TCGACAGTAGAAAAA TTACTCA GCACA TAAGTAA GAACCTGACTGGCAT Pnuc_1577 1650320 - 1649430 - | hypothetical protein TERM 1470 1649549 - 1649565 + g 72 -8.7 -3.76839 | AAGGCTGGGCTGTAG TTGCGGC AAT GCTGCAA TTTCCCTTGGCATTA Pnuc_1578 1651429 - 1650383 - | arsenical-resistance protein TERM 1471 1650584 - 1650567 - G 70 -4.9 -4.45168 | gap 1 GCTGTAAAAGATAAA GTAC-AGC AAC GCTTGTAC TCAATGCCCATTTTG Pnuc_1579 1651905 - 1651426 - | protein tyrosine phosphatase Pnuc_1580 1652231 - 1651902 - | regulatory protein, ArsR TERM 1472 1652359 - 1652344 - H 70 -3.3 -4.87786 | overlap 1652333 1652329 1652347 TTAATGTCATAAAAA TGACA TATAAG TGTCA TATACGCTTGAAAAT Pnuc_1581 1652448 - 1652729 + | hypothetical protein TERM 1473 1653475 - 1653435 - g 84 -7.8 -4.78848 | gap 1, opp_overlap 1653446, overlap 1653437 CCGGTAAAGACAAAA GT-CTACTTAAAGTTGATC AAGA GATCACCTTTAAGTGGGAC GGGAAAATTTCAAGT TERM 1474 1653472 - 1653437 - g 71 -10.6 -2.67228 | opp_overlap 1653446, overlap 1653435 GGTAAAGACAAAAGT CTACTTAAAGTTGATC AAGA GATCACCTTTAAGTGG GACGGGAAAATTTCA Pnuc_1582 1652729 - 1653502 + | hypothetical protein TERM 1475 1653519 - 1653500 - T 70 -3.6 -4.87786 | TCAAGTCTAGAAAAA TAAGGCTT TAGA AAACCTCA GGGACATACATCTCT Pnuc_1583 1654412 - 1653507 - | hypothetical protein Pnuc_1584 1655230 - 1654463 - | phospholipid/glycerol acyltransferase TERM 1476 1654589 - 1654577 - G 72 -5.5 -4.52897 | AGAAGGAAGAATAAA GGTCA ATT CGACC GTGAGCTTTCGATGA TERM 1477 1655030 - 1655048 + g 87 -11 -3.97019 | opp_overlap 1655026 CAGCAAAAATGGAGC GGCAGGCA ATA TGTCTGCC TTCTTTAGCCTTAAT Pnuc_1585 1655338 - 1656144 + | metallophosphoesterase Pnuc_1586 1656141 - 1657169 + | glycosyl transferase, group 1 TERM 1478 1657223 - 1657211 - g 72 -5.5 -4.41353 | TCACATAGACCAAAA TCCCC ACA AGGGA AACCGAGGTCTAGCA TERM 1479 1657536 - 1657555 + G 72 -10.7 -2.91383 | CTTGCCCTATTTGTG GCAGCCC TCATCT GGGCTGC TGTCTGCATCCCCAT Pnuc_1587 1657182 - 1657586 + | diacylglycerol kinase TERM 1480 1658240 - 1658227 - g 85 -3.9 -5.51402 | ATACATGCAAAAAAA TGATT ATGA AATCA TGCTAGGTTGCGCTA Pnuc_1588 1657628 - 1658551 + | putative hemolysin-like protein TERM 1481 1658597 - 1658579 - T 87 -8.8 -4.56597 | opp_overlap 1658579 GCGGGCTTTTAAAAA CCACCTCA ATA TGGGGTGG TTTTTTATTACTACT TERM 1482 1658579 - 1658597 + T 100 -11 -5.52023 | opp_overlap 1658579 GCGGGCTTTTAAAAA CCACCTCA ATA TGGGGTGG TTTTTTATTACTACT Pnuc_1589 1660170 - 1658608 - | Ppx/GppA phosphatase Pnuc_1590 1660493 - 1660281 - | hypothetical protein Pnuc_1591 1661264 - 1660548 - | MgtC/SapB transporter Pnuc_1592 1663027 - 1661282 - | alkaline phosphatase Pnuc_1593 1664553 - 1663123 - | hypothetical protein Pnuc_1594 1665110 - 1664607 - | protein tyrosine phosphatase TERM 1483 1665406 - 1665390 - H 100 -7.9 -5.9003 | opp_overlap 1665390 AAATGAAGAAAAAAA GCCCAGC AGA ACCGGGC TTTAAAAGAAGATTT Pnuc_1595 1665543 - 1666019 + | MgtC/SapB transporter TERM 1484 1666313 - 1666297 - T 85 -3 -5.77734 | opp_overlap 1666302 1666304, overlap 1666304 AAAGAAAAAGAAAAA GGATTA AGCGG CAATCC GCTCTTTAGGGAATC Pnuc_1596 1667598 - 1666300 - | integral membrane sensor signal transduction histidine kinase Pnuc_1597 1668377 - 1667664 - | two component transcriptional regulator Pnuc_1598 1669100 - 1668393 - | phosphate uptake regulator, PhoU Pnuc_1599 1669949 - 1669113 - | phosphate ABC transporter, ATPase subunit Pnuc_1600 1670824 - 1669958 - | phosphate ABC transporter, inner membrane subunit PstA TERM 1485 1670697 - 1670681 - G 70 -5.2 -4.43189 | opp_overlap 1670681 ATTAATTGCAGAAAA TCCTTT AATAA AAAGGA TGCTTAAAATCCAAA Pnuc_1601 1671807 - 1670821 - | phosphate ABC transporter, inner membrane subunit PstC TERM 1486 1671852 - 1671832 - R 100 -12.6 -4.54821 | opp_overlap 1671835 ATCTTAAGTAGAAAA CGACCCTG ATTAA CAGGGTCG TTCAAATCTGAAAAA Pnuc_1602 1672902 - 1671880 - | phosphate ABC transporter, periplasmic phosphate-binding protein Pnuc_1603 1673588 - 1673040 - | putative lipoprotein Pnuc_1604 1674142 - 1673588 - | hypothetical protein Pnuc_1605 1674552 - 1674151 - | putative thiol-disulphide oxidoreductase DCC TERM 1487 1674502 - 1674486 - G 74 -3.7 -4.99043 | CTGTGAGAAACAAAA TTTCTGC CTG GCACAAA GGGCATGCGCCATCG TERM 1488 1674719 - 1674703 - g 70 -5.1 -4.44608 | opp_overlap 1674703, overlap 1674700 GTTACTTAAAAATAA CCCCT CCTGCTC AGGGG TTGTAGGGGTTCATC Pnuc_1606 1674614 - 1675309 + | short-chain dehydrogenase/reductase SDR Pnuc_1607 1675493 - 1675332 - | hypothetical protein Pnuc_1608 1677037 - 1675502 - | deoxyribodipyrimidine photolyase-related protein Pnuc_1609 1677303 - 1677034 - | hypothetical protein Pnuc_1610 1677399 - 1677746 + | hypothetical protein TERM 1489 1677795 - 1677774 - T 100 -10.9 -5.45802 | opp_overlap 1677773 1677774 GCCTTAAAAGAAAAA CCCTCACCA TTAC TGATGAGGG CTTACTTATCTGGAT Pnuc_1611 1678660 - 1677845 - | methylmalonyl-CoA decarboxylase TERM 1490 1678068 - 1678091 + g 76 -11.8 -2.72344 | opp_overlap 1678064 1678065 TCCGTAGTAAATGCT TCTAGTTCCG CACT CGGGACTAGA TGATTCACAATCCCC Pnuc_1612 1679817 - 1678657 - | L-carnitine dehydratase/bile acid-inducible protein F Pnuc_1613 1681212 - 1679947 - | hypothetical protein Pnuc_1614 1682352 - 1681366 - | cytochrome d ubiquinol oxidase, subunit II TERM 1491 1681685 - 1681668 - G 76 -8.5 -4.14541 | CAGGAAGTACATAAA TTGCTTG TGGC CAAGCAA ACCACCTACTTAAAT Pnuc_1615 1683796 - 1682342 - | cytochrome bd ubiquinol oxidase, subunit I TERM 1492 1682799 - 1682789 - G 74 -6.8 -4.21465 | TCGAAAAGCAAAGAA TGGC AAT GCCA TTGGAGGAGTTTCAT TERM 1493 1683112 - 1683092 - G 75 -6.1 -4.55118 | CAAGGCCATAGAAAA CATCAGGCA GAC TGCTTGACG TGAGCCTTGGGTAAA Pnuc_1616 1685312 - 1683828 - | malate:quinone oxidoreductase Pnuc_1617 1685726 - 1685346 - | hypothetical protein fumC 1687223 - 1685766 - | fumarate hydratase TERM 1494 1686856 - 1686826 - G 71 -10.6 -2.63723 | opp_overlap 1686825 1686825, overlap 1686825 TTGCCACCAACCAAT TGAATGCAGCGATT AGA AATCACTTCATTCA CATTCATGTTCGATT Pnuc_1619 1688163 - 1687471 - | hypothetical protein Pnuc_1620 1688405 - 1688163 - | hypothetical protein Pnuc_1621 1689558 - 1688548 - | Mg2+ transporter protein, CorA family protein Pnuc_1622 1689617 - 1690480 + | hypothetical protein Pnuc_1623 1691517 - 1691038 - | hypothetical protein TERM 1495 1691702 - 1691676 - R 88 -3.7 -5.74684 | opp_overlap 1691679, overlap 1691679 CAATAAAAACAAAAA GGAGTCTAGAA AATAA TCCTAGACCTC TTTTGCAAATCTACT TERM 1496 1691770 - 1691746 - R 89 -10 -4.20769 | overlap 1691748 ACACTTCAAGATAAA TAGGCCTCGC AATTA GCAAGGCCCA TCATCACCAATCTAT TERM 1497 1691768 - 1691748 - R 80 -10.4 -3.69842 | overlap 1691746 ACTTCAAGATAAATA GGCCTCGC AATTA GCAAGGCC CATCATCACCAATCT Pnuc_1624 1693650 - 1691782 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pnuc_1625 1694288 - 1693860 - | hypothetical protein TERM 1498 1693967 - 1693990 + g 78 -6.6 -4.60487 | overlap 1693969 TGATGTGGAATGTTT TGGAGCCGGC AATC GGCGGCTCGA TTTTTGCCCATCGTG TERM 1499 1694138 - 1694119 - G 76 -2.1 -5.40004 | opp_overlap 1694123, overlap 1694120 CAGTAAATTAAAAAA CCAAGCG TTACCG CGCTTAA CTCTATTGCTGTAAA Pnuc_1626 1694933 - 1694400 - | superoxide dismutase, copper/zinc binding TERM 1500 1694894 - 1694915 + g 71 -3.7 -4.90266 | overlap 1694906 AAAGTACTCCCACAG CGGTTAATG CGAT CAATAACTG TTTTTGATTCATGCC Pnuc_1627 1695079 - 1695660 + | putative phosphohistidine phosphatase, SixA TERM 1501 1695712 - 1695677 - T 95 -12 -4.29845 | opp_overlap 1695684 1695695, overlap 1695684 TAAGGCAATCCAAAA GACAAAACCCCCATCA CTTC TGATGAGGGTTTCTTC GGACTTACTTCCTGA TERM 1502 1695684 - 1695705 + T 82 -8.7 -4.183 | opp_overlap 1695677 1695684, overlap 1695695 ATCCAAAAGACAAAA CCCCCATCA CTTC TGATGAGGG TTTCTTCGGACTTAC TERM 1503 1695705 - 1695684 - T 93 -10.9 -4.90471 | opp_overlap 1695684 1695695, overlap 1695677 ATCCAAAAGACAAAA CCCCCATCA CTTC TGATGAGGG TTTCTTCGGACTTAC Pnuc_1628 1696410 - 1695811 - | hypothetical protein TERM 1504 1696540 - 1696557 + r 72 -9.9 -3.05384 | opp_overlap 1696540, overlap 1696542 AAGCATTCAAAAAAA TACCACC CGAA GGTGGTA TTAAGTCAGGGGACA TERM 1505 1696557 - 1696540 - R 100 -9.9 -5.49729 | opp_overlap 1696540 1696542 AAGCATTCAAAAAAA TACCACC CGAA GGTGGTA TTAAGTCAGGGGACA Pnuc_1629 1697476 - 1696586 - | hypothetical protein Pnuc_1630 1698072 - 1697494 - | PfpI family intracellular peptidase Pnuc_1631 1698878 - 1698102 - | hydroxypyruvate isomerase Pnuc_1632 1699555 - 1698893 - | putative aldolase Pnuc_1633 1700829 - 1699552 - | type III effector Hrp-dependent outers TERM 1506 1700863 - 1700891 + r 73 -6.9 -4.2828 | gap 1 CTAATTAATTTATTT TTTTCCC-GGAA GTTCAA TTCCAGGGAAAA TTTTAATCACTGCAG Pnuc_1634 1701756 - 1700857 - | 3-hydroxyisobutyrate dehydrogenase TERM 1507 1701498 - 1701508 + g 80 -6.8 -4.56597 | CCTTCTTCATCGCAT TGGC TGC GCCA TTTTTACCAAACAGC TERM 1508 1701806 - 1701779 - R 100 -9.9 -5.27335 | gap 1, opp_overlap 1701804 CCTTTTAAATAAAAA GTGCCA-CCGCC GTGAT GGCAGATGGCAC TAAATCTAGTGATTG Pnuc_1635 1703124 - 1701823 - | major facilitator transporter Pnuc_1636 1703317 - 1704117 + | GntR domain-containing protein Pnuc_1637 1705094 - 1704114 - | NAD-dependent epimerase/dehydratase Pnuc_1638 1705234 - 1706130 + | hypothetical protein Pnuc_1640 1707181 - 1706378 - | extracellular solute-binding protein Pnuc_1641 1707910 - 1707239 - | hypothetical protein TERM 1509 1707694 - 1707684 - G 71 -6.8 -4.03234 | opp_overlap 1707684 1707683 TTTGCTTTAGAGAAA CGAG CGT CTCG ATTAATTCTAAAAAG Pnuc_1642 1708032 - 1708688 + | DSBA oxidoreductase Pnuc_1643 1708703 - 1709851 + | iron-containing alcohol dehydrogenase TERM 1510 1710180 - 1710197 + G 73 -4.1 -4.81163 | GAATGCTGAGGATGT TGCTTCA GCGA TGGGGCA TTTTGTTCATGTTTA Pnuc_1644 1709848 - 1710294 + | thioesterase superfamily protein Pnuc_1645 1711166 - 1710348 - | hypothetical protein TERM 1511 1711285 - 1711272 - R 91 -8.1 -5.19212 | opp_overlap 1711272 ATGAGTATGAAAAAA CCACC CGAA GGTGG TTATATTTAGAAGTG TERM 1512 1711272 - 1711285 + r 73 -8.1 -3.82202 | opp_overlap 1711272 ATGAGTATGAAAAAA CCACC CGAA GGTGG TTATATTTAGAAGTG Pnuc_1646 1711894 - 1711292 - | nitroreductase Pnuc_1647 1713417 - 1712017 - | DNA polymerase III, epsilon subunit TERM 1513 1712056 - 1712067 + g 82 -5.8 -5.15381 | overlap 1712047 TTGTTGCTTATAGGC GCCT GATA AGGC TTTTTTAACTATCTT Pnuc_1648 1714024 - 1713437 - | BadM/Rrf2 family transcriptional regulator Pnuc_1649 1714060 - 1714605 + | hypothetical protein Pnuc_1650 1714895 - 1715539 + | peptidase S16, lon domain-containing protein Pnuc_1651 1715544 - 1716404 + | hypothetical protein TERM 1514 1716446 - 1716466 + G 75 -2.6 -5.11937 | gap 1, overlap 1716447 AATTATCTTTTATCT G-GCATGGT CGGC ATCATGCTC TTTTTTACCGTTGTT TERM 1515 1716743 - 1716768 + G 72 -4.9 -4.7189 | CACGGATCCAGCGTA GTAATTAAC CTCTTTCA GTTAATTAC TTTTATCTATCTTTT Pnuc_1652 1716422 - 1716799 + | hypothetical protein Pnuc_1653 1717400 - 1716996 - | membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) TERM 1516 1717805 - 1717793 - g 70 -9.1 -3.32914 | opp_overlap 1717792 1717791 1717802, overlap 1717779 1717787 AGGCAACTAGAGGAA CTGCC CCA GGCAG AATTTAATTCATGCT Pnuc_1654 1717484 - 1718113 + | 2OG-Fe(II) oxygenase Pnuc_1655 1718106 - 1719107 + | FAD dependent oxidoreductase Pnuc_1656 1719126 - 1719530 + | hypothetical protein Pnuc_1657 1719827 - 1720768 + | ABC transporter related TERM 1517 1721166 - 1721180 + G 74 -5.7 -4.56436 | CCGCTTCATGTCGAG CATCC TATAT GGATG TTGTTTTATTTAATA Pnuc_1658 1720758 - 1721525 + | ABC-2 type transporter TERM 1518 1721568 - 1721535 - T 100 -14.1 -4.15508 | opp_overlap 1721537 1721541, overlap 1721537 1721541 AAGTAATCCTCAAAA TATAAACCCTCATCA TTGC TGATGAGGGTTTATT CATAGTCGCCTTATG TERM 1519 1721566 - 1721537 - T 100 -16.7 -3.67 | opp_overlap 1721537 1721541, overlap 1721535 1721541 GTAATCCTCAAAATA TAAACCCTCATCA TTGC TGATGAGGGTTTA TTCATAGTCGCCTTA TERM 1520 1721537 - 1721566 + T 100 -16.7 -3.22223 | opp_overlap 1721537 1721535 1721541, overlap 1721541 GTAATCCTCAAAATA TAAACCCTCATCA TTGC TGATGAGGGTTTA TTCATAGTCGCCTTA TERM 1521 1721541 - 1721562 + T 100 -13.1 -4.2704 | opp_overlap 1721537 1721535 1721541, overlap 1721537 TCCTCAAAATATAAA CCCTCATCA TTGC TGATGAGGG TTTATTCATAGTCGC TERM 1522 1721562 - 1721541 - T 100 -13.1 -4.45168 | opp_overlap 1721541 1721537, overlap 1721537 1721535 TCCTCAAAATATAAA CCCTCATCA TTGC TGATGAGGG TTTATTCATAGTCGC Pnuc_1659 1721870 - 1721589 - | hypothetical protein TERM 1523 1722227 - 1722250 + G 75 -3 -5.09895 | opp_overlap 1722232 1722233 ATTGATTTGGGTGCT GGAAATTGCC AGAA GGCAGAATCC TTTTTTAACTCGCTA TERM 1524 1722872 - 1722861 - g 70 -2.2 -5.0133 | overlap 1722842 1722867 CAGGTTTTGAAAAAA CCCA AATC TGGA CTGATCCAAAAAACT Pnuc_1660 1721966 - 1722913 + | hypothetical protein Pnuc_1661 1722903 - 1724141 + | hypothetical protein Pnuc_1662 1724131 - 1725267 + | aminotransferase, class I and II TERM 1525 1725313 - 1725344 + T 72 -4.4 -4.7373 | opp_overlap 1725302 1725318, overlap 1725318 TGTATTCCTGAAAGA AAAAACCCTCACCA TTAC TGATGAGGGTTTAA TTTTTAGTGAACTCA TERM 1526 1725339 - 1725318 - T 100 -10.9 -5.63517 | opp_overlap 1725313 1725318 TCCTGAAAGAAAAAA CCCTCACCA TTAC TGATGAGGG TTTAATTTTTAGTGA TERM 1527 1725318 - 1725339 + T 85 -8.7 -4.35327 | opp_overlap 1725318, overlap 1725313 TCCTGAAAGAAAAAA CCCTCACCA TTAC TGATGAGGG TTTAATTTTTAGTGA Pnuc_1663 1726677 - 1725400 - | general substrate transporter TERM 1528 1725775 - 1725764 - G 71 -3.6 -4.77775 | opp_overlap 1725771, overlap 1725766 1725771 AGTCCAGAAAATAAA GCCA TAAT CGGC CATCGCCCAATTCTG TERM 1529 1725840 - 1725826 - G 74 -5.7 -4.56702 | TGGCAACCAAATAAA GTTGG ATAAA CCAAC GAATAAAGTAATGAG TERM 1530 1726386 - 1726376 - G 74 -5.4 -4.63932 | TAGCTTGGAATAAAA GCAA CCA TTGC AGTTCCTGTAGCCAT TERM 1531 1727451 - 1727418 - g 72 -5.4 -4.53705 | AATGTCTATAGAAAA CTTGGCTTTAAAGA AGAAGG TCTTTTAAGACAAG AGTATTTTGCCGATG TERM 1532 1727474 - 1727496 + G 73 -7.7 -4.09864 | TGCCGATGGTATGTA TCGCGATGC CTATT GCATGGCGA TTTTCCAGAATGAGT Pnuc_1664 1727007 - 1727534 + | GCN5-related N-acetyltransferase TERM 1533 1727599 - 1727574 - T 100 -12.7 -5.30616 | opp_overlap 1727574 GCAGGCAAAGAAAAA CGACTTAGGAA TTTC TCCCTAAGTCG TTGATATTACCGGTT TERM 1534 1727574 - 1727599 + T 77 -10.5 -3.37017 | opp_overlap 1727574 GCAGGCAAAGAAAAA CGACTTAGGAA TTTC TCCCTAAGTCG TTGATATTACCGGTT Pnuc_1665 1728953 - 1727673 - | major facilitator superfamily metabolite/H(+) symporter TERM 1535 1728321 - 1728331 + g 74 -5.4 -4.59773 | overlap 1728320 TAGGTTAGATGCTGT CTCT GAG AGAG TTTTTCGCAATAAGA TERM 1536 1728610 - 1728585 - G 79 -10.5 -3.6292 | AGAAAGACCCTGAAA CAGCCTTGCTA ATAA TAGTAAGGCTG GGGCCCAAATACCAA Pnuc_1666 1729816 - 1729124 - | two component transcriptional regulator Pnuc_1667 1732529 - 1729836 - | osmosensitive K+ channel signal transduction histidine kinase TERM 1537 1730798 - 1730788 - G 72 -8.2 -3.6682 | opp_overlap 1730778 1730776 TTCGATTTATCGAAA GCCC ATT GGGC GATGGATAAGTCTGC TERM 1538 1731701 - 1731721 + g 73 -9.7 -3.42841 | overlap 1731698 ATGGAATCTGAAGTT GTGCGGCAA CTC TTGCAGCAC TTCTAATGACATTCT Pnuc_1668 1733104 - 1732535 - | potassium-transporting ATPase, C subunit Pnuc_1669 1735210 - 1733135 - | K+-transporting ATPase, B subunit TERM 1539 1734489 - 1734470 - G 73 -4.2 -4.74013 | overlap 1734471 GCTAAACATAGAAAA CGGTAGCA AAGT TGCAACCA CCACCAAGAAAACAA Pnuc_1670 1737019 - 1735229 - | potassium-transporting ATPase subunit A TERM 1540 1737455 - 1737488 + r 83 -9.7 -3.95584 | opp_overlap 1737459, overlap 1737459 GACTACACGGAAAGA TAAACGACTTAGGAA TTTC TCCCTAAGTCGTTGA TTTCATTGGTGGGCC TERM 1541 1737484 - 1737459 - R 100 -12.7 -4.35646 | opp_overlap 1737455 1737459 ACACGGAAAGATAAA CGACTTAGGAA TTTC TCCCTAAGTCG TTGATTTCATTGGTG TERM 1542 1737459 - 1737484 + r 80 -10.5 -3.62539 | opp_overlap 1737459, overlap 1737455 ACACGGAAAGATAAA CGACTTAGGAA TTTC TCCCTAAGTCG TTGATTTCATTGGTG TERM 1543 1737921 - 1737908 - R 100 -8.1 -5.69262 | opp_overlap 1737908 CCATAAAAAGAAAAA CCACC CGAA GGTGG TTTGAACTTTTGAAT TERM 1544 1737908 - 1737921 + r 70 -8.1 -3.76815 | opp_overlap 1737908 CCATAAAAAGAAAAA CCACC CGAA GGTGG TTTGAACTTTTGAAT Pnuc_1671 1738333 - 1737953 - | hypothetical protein Pnuc_1672 1738671 - 1738345 - | heavy metal transport/detoxification protein Pnuc_1673 1739332 - 1738694 - | hypothetical protein Pnuc_1674 1739610 - 1739329 - | hypothetical protein TERM 1545 1739667 - 1739645 - R 73 -7 -4.18421 | overlap 1739646 TAATTAGATAAACAA CTCCATCCAA ATT TTGGACGGAC TACTGCTAGGGGGAT TERM 1546 1739666 - 1739646 - R 75 -10.5 -3.09968 | overlap 1739645 AATTAGATAAACAAC TCCATCCAA ATT TTGGACGGA CTACTGCTAGGGGGA Pnuc_1675 1740032 - 1739682 - | hypothetical protein Pnuc_1676 1740713 - 1740201 - | hypothetical protein Pnuc_1677 1742935 - 1740755 - | heavy metal translocating P-type ATPase Pnuc_1678 1743034 - 1743432 + | MerR family transcriptional regulator TERM 1547 1743455 - 1743437 - T 75 -3 -5.26875 | opp_overlap 1743437 CCGTGAAGTAAAAAA GAGGTGAC ACT ACCGCCTC TTATTGGCCGAGTTG Pnuc_1679 1744818 - 1743589 - | hypothetical protein Pnuc_1680 1747943 - 1744815 - | CzcA family heavy metal efflux protein Pnuc_1681 1749049 - 1747943 - | RND family efflux transporter MFP subunit Pnuc_1682 1749520 - 1749113 - | hypothetical protein TERM 1548 1749781 - 1749754 - R 100 -12.8 -5.60993 | TTTTTGACAAAAAAA TGCCGGCAATCC CTGA GAATTACCGGCA AATCGTTTAAAACGA Pnuc_1683 1750202 - 1749798 - | hypothetical protein TERM 1549 1749961 - 1749933 - G 72 -3.1 -5.00616 | overlap 1749936 1749937 GGGCTTGCCAAAAAA GTACTGATCTAGC GTT GCTAACTCAATGC AATCGTCACAAAACT TERM 1550 1750269 - 1750245 - R 100 -13 -4.99035 | TTAGTCATATAAAAA CGTCTGCAAT GTTTA ATTGCAGACG CAAATCGTTTGAAAC Pnuc_1684 1750614 - 1750288 - | hypothetical protein Pnuc_1685 1751361 - 1750636 - | hypothetical protein TERM 1551 1751408 - 1751380 - R 71 -9.6 -2.75183 | opp_overlap 1751378, overlap 1751366 1751377 ACCTCCAGTGAATGA TTACTGCAGGGC AACTA ACCCCGCAGCAA TCTGTTTAGTTAAAA Pnuc_1686 1752444 - 1751425 - | hypothetical protein TERM 1552 1751839 - 1751819 - G 76 -8.4 -4.08064 | AAGCCCCCTTCAAAA TTTTGCAC GTATT GTGCAAAA TCAGCAGGTTCGCAG TERM 1553 1751846 - 1751856 + g 72 -3.2 -5.0666 | TGTGCAAAATCAGCA GGTT CGC AGCC TTTCTTTTTTGCGTA Pnuc_1687 1752843 - 1752469 - | hypothetical protein TERM 1554 1753393 - 1753381 - g 72 -4.8 -4.67904 | CATGAAGGTTAAAAA GGGT GATTT ACCC AAAGACGAGGCGGCC Pnuc_1688 1753208 - 1754125 + | hypothetical protein Pnuc_1689 1754715 - 1754143 - | phage integrase family protein TERM 1555 1754378 - 1754403 + g 72 -2.7 -5.07486 | gap 1 GCGTTGAAGCCATCA CTGCTTTTCTTC TGG GAATAAAA-CAG TTTTTCTTGGGGATC TERM 1556 1754956 - 1754923 - R 82 -6.1 -4.84642 | gap 1, opp_overlap 1754925 CCCAAATGAAGAAAA CAGCCGAATTGCGT TTTATCT ATGCAAT-CGGCTG CCTTACTACTAAATC Pnuc_1690 1755508 - 1754987 - | hypothetical protein TERM 1557 1755040 - 1755054 + g 72 -2.8 -5.0133 | opp_overlap 1755040 TTGATGAAAAGTAAT CTGG GCTGTTG CCAG TTTTTTCCCGGCATG TERM 1558 1755589 - 1755564 - H 71 -7.6 -3.91897 | opp_overlap 1755564 1755585 GCCTCTAGTCACAAA CCCAGAAAAG AAGTCA CTTGTCTGGG TTACTAGTCGCTTCA Pnuc_1691 1755887 - 1756330 + | hypothetical protein TERM 1559 1756337 - 1756367 + F 81 -6.9 -4.81249 | gap 1, overlap 1756338 AAGAAATGATGATCC AGGGCTAGTTTGCA ATCG TGCAG-CTAGCCCA TTTTTAACTTTAGGA TERM 1560 1756338 - 1756366 + F 79 -10.4 -3.48026 | gap 1, overlap 1756337 AGAAATGATGATCCA GGGCTAGTTTGCA ATCG TGCAG-CTAGCCC ATTTTTAACTTTAGG Pnuc_1692 1756539 - 1756901 + | hypothetical protein TERM 1561 1756946 - 1756936 - f 73 -5.4 -4.53047 | overlap 1756904 ACTAAATATAAGAAA TGGA GAG TCCA AATGAGATTGAATGA Pnuc_1693 1756948 - 1757412 + | hypothetical protein TERM 1562 1757473 - 1757459 - T 75 -2.8 -5.20154 | overlap 1757450 ATATAACGCAAAAAA GTGC GCTACCG GCAC GACAGAGACTATGCG Pnuc_1694 1758903 - 1757500 - | phage integrase family protein TERM 1563 1758613 - 1758625 + g 76 -4.7 -4.84529 | opp_overlap 1758613 TACATTGTAGGAAAC GGGAG CCT CACCC TTTTTAGCTTTGTCA TERM 1564 1758696 - 1758708 + g 74 -3.4 -5.0538 | opp_overlap 1758696 TCTTGGTGACAACAG GAAG ATTGG CTTC TTTTTTAAGCTCAGC Pnuc_1695 1759476 - 1758958 - | hypothetical protein Pnuc_1696 1761415 - 1759490 - | hypothetical protein TERM 1565 1761077 - 1761065 - G 85 -6.3 -5.14563 | opp_overlap 1761064 TTTTGCATTAAAAAA GTCTT GCA AAGAC AATTCTTGCTTATCT TERM 1566 1761535 - 1761501 - R 70 -8 -3.67976 | gap 1, opp_overlap 1761527, overlap 1761505 1761527 CGTACCAACTTCAAA TGCACAGCCCATTAG ATCAAG CAAATGGGCTGT-CA ACCCCTAAATTAAGT TERM 1567 1761532 - 1761505 - R 70 -9.9 -2.66326 | opp_overlap 1761527, overlap 1761501 1761527 CCAACTTCAAATGCA CAGCCCATTAG ATCAAG CAAATGGGCTG TCAACCCCTAAATTA Pnuc_1697 1762261 - 1761551 - | hypothetical protein TERM 1568 1761693 - 1761681 - G 75 -2.6 -5.24989 | CTACAGATTAAAAAA GCGG GGCCT CCAC TAATCCCGCCTAAAC TERM 1569 1762341 - 1762320 - R 95 -8.7 -5.47846 | opp_overlap 1762320 AATTAAAAAACAAAA CCCCCACCA TTGC TGATGAGGG TTTGCTTTTCTGGTG TERM 1570 1762533 - 1762545 + r 71 -6.3 -4.21142 | opp_overlap 1762543, overlap 1762534 1762543 TCGGCGTTGCCATAT TCGTT TAA AACGA TTTGTGTATTCGACT Pnuc_1698 1764940 - 1762904 - | RNA polymerase, sigma 70 subunit, RpoD TERM 1571 1765591 - 1765602 + r 81 -5.8 -5.03314 | opp_overlap 1765591 GAACAGAGGATTATA GTCG ATTG CGAC TTTTTTACCCCTGAC Pnuc_1699 1767611 - 1765674 - | DNA primase Pnuc_1700 1768085 - 1767639 - | GatB/Yqey domain-containing protein TERM 1572 1768035 - 1768047 + g 71 -3.4 -4.87807 | opp_overlap 1768011 1768021 ACGTGCCACTTCTTT TGCA CGCAT TGCA TTTTTCATATCTTCG TERM 1573 1768140 - 1768164 + r 76 -9.3 -3.62591 | gap 1, opp_overlap 1768140 ATTAAAAAGCAAAAA CCCGCTG-CG TTTCAC CGTCAGCGGG TTTAAAGCTTCTCGG TERM 1574 1768164 - 1768140 - R 93 -9.3 -5.1971 | gap 1, opp_overlap 1768140 ATTAAAAAGCAAAAA CCCGCTG-CG TTTCAC CGTCAGCGGG TTTAAAGCTTCTCGG Pnuc_1701 1768414 - 1768202 - | ribosomal protein S21 Pnuc_1702 1768493 - 1769566 + | metalloendopeptidase glycoprotease family Pnuc_1703 1770429 - 1769602 - | hypothetical protein Pnuc_1704 1772356 - 1770455 - | deoxyxylulose-5-phosphate synthase TERM 1575 1772278 - 1772315 + g 82 -5.6 -5.1101 | gap 1 AGATAAATTGGCGCA GCTCATCCGC-AAGAGC AGGGA GCTCTTCGCGAGTCAGC TTTTTTAAATCATCG Pnuc_1705 1773287 - 1772373 - | polyprenyl synthetase Pnuc_1706 1773521 - 1773288 - | exonuclease VII, small subunit Pnuc_1707 1773684 - 1774790 + | Rieske (2Fe-2S) domain-containing protein TERM 1576 1774964 - 1774954 - g 76 -4 -5.03314 | CTCATTGGTAAAAAA TCTT ATG AAGA GAGTCATATTCCGGG TERM 1577 1775114 - 1775081 - g 75 -6.7 -4.4261 | opp_overlap 1775082 1775089 1775095, overlap 1775082 GGGCCAAGACCAAAA CCCGCTTAGGTATTG CCCC CAATACCTTAGTGGT GGCTTATGACAAACA TERM 1578 1775113 - 1775082 - g 74 -10.2 -3.25084 | opp_overlap 1775082 1775089 1775095, overlap 1775081 GGCCAAGACCAAAAC CCGCTTAGGTATTG CCCC CAATACCTTAGTGG TGGCTTATGACAAAC TERM 1579 1775082 - 1775113 + G 78 -12.4 -2.59431 | opp_overlap 1775082 1775081, overlap 1775089 1775095 GGCCAAGACCAAAAC CCGCTTAGGTATTG CCCC CAATACCTTAGTGG TGGCTTATGACAAAC Pnuc_1708 1774843 - 1775673 + | 3-mercaptopyruvate sulfurtransferase Pnuc_1709 1776443 - 1775670 - | zinc/iron permease TERM 1580 1776107 - 1776117 + g 77 -6.8 -4.43844 | opp_overlap 1776106 AAATCATCCAACCAC TGCG CCC CGCA TTTTCTGCATCGTGG Pnuc_1710 1777323 - 1776448 - | carboxymethylenebutenolidase Pnuc_1711 1780170 - 1777339 - | DNA polymerase I TERM 1581 1777934 - 1777952 + g 71 -9.6 -3.28188 | overlap 1777935 GCCTGGTGGACGTCT TTGCCTTC TTT GAAGGCAG TTAATAAATTTTCAT TERM 1582 1777935 - 1777951 + g 73 -10.9 -2.5619 | overlap 1777934 CCTGGTGGACGTCTT TGCCTTC TTT GAAGGCA GTTAATAAATTTTCA TERM 1583 1779561 - 1779581 + g 74 -5.5 -4.7254 | opp_overlap 1779550 1779560 1779554 CTAAGTTACCAAATT CTGCTAA CCATTTA TTAGCAG TTTTTGGTCCAGCCT TERM 1584 1780304 - 1780315 + G 78 -5.8 -4.88129 | CTTAATCACGGTCTA GCTC TCAT GAGC TTTTTAGTGGTTTTT Pnuc_1712 1780253 - 1780666 + | putative transmembrane protein Pnuc_1713 1780706 - 1781683 + | homoserine kinase TERM 1585 1781919 - 1781904 - g 79 -8.2 -4.32201 | opp_overlap 1781904 TCAAGCAATTCAAAA GGAGCG TATT CGCCCC TTAGTCTACTTAGCG Pnuc_1714 1781680 - 1782456 + | putative transmembrane protein Pnuc_1715 1784816 - 1782453 - | UvrD/REP helicase TERM 1586 1783697 - 1783723 + g 72 -8.1 -3.66874 | overlap 1783698 CAATGATGCGTGACT GTGCATTGCTT CGATA AAGCAATGCAA TTTCAGTACGCTTAA TERM 1587 1783698 - 1783722 + g 77 -11.6 -2.79803 | overlap 1783697 AATGATGCGTGACTG TGCATTGCTT CGATA AAGCAATGCA ATTTCAGTACGCTTA TERM 1588 1785076 - 1785064 - g 71 -7.7 -3.90291 | opp_overlap 1785063 1785064 ACGCTTTCAATCAAA CCATC ATG GATGG CTTAGTGCGTCATGC TERM 1589 1786240 - 1786230 - g 73 -2.4 -5.13343 | GAAGCCAAAACAAAA GCTG TAG CTGC TGGATATACCGGTCA TERM 1590 1786973 - 1786983 + G 71 -6.8 -4.0683 | opp_overlap 1786973 1786972 TCGCTTTGACAATAT TGCC ACC GGCA TTTATCAATTTGTTT Pnuc_1716 1784841 - 1787732 + | valyl-tRNA synthetase Pnuc_1717 1787764 - 1788654 + | UTP-glucose-1-phosphate uridylyltransferase GalU TERM 1591 1788711 - 1788658 - T 72 -9.7 -3.02371 | opp_overlap 1788664, overlap 1788662 TCCTTGAAATAAGGA TGAAGGGGGGGTGCTTATCTTCTTT TTAG AAAGAAGACTAAAACATCCCCTTCA GTAGCACTTCCAATT Pnuc_1718 1788917 - 1788672 - | SirA family protein TERM 1592 1788772 - 1788788 + g 76 -7.9 -4.19735 | GGAAAATCTCTAGCC GCGCCTG AAT CAGTCGC TTTAATTTTGAGAAC Pnuc_1719 1791538 - 1788914 - | alanyl-tRNA synthetase TERM 1593 1790435 - 1790407 - G 72 -6.1 -4.21462 | opp_overlap 1790432 AGGCACCATCCAAAA TTTCCATACCATT GGC AATTGTTTGGAAA AAGCGCTCTTCTTCT TERM 1594 1791645 - 1791631 - H 75 -5.7 -4.71791 | opp_overlap 1791631 ACATCAATAAATAAA TCGAC ACTAA GTCGA TCTTAAGGAGCGCAA Pnuc_1720 1791662 - 1792120 + | hypothetical protein Pnuc_1721 1792141 - 1793643 + | hypothetical protein TERM 1595 1793690 - 1793665 - f 85 -8.9 -4.19177 | opp_overlap 1793668, overlap 1793668 ATGCTTCAATAGAAA CGAGCCCGCAG CAAT CTGCGGGCTTT TTCTTTATGGGCTGG TERM 1596 1793687 - 1793668 - f 100 -15 -3.11182 | opp_overlap 1793668, overlap 1793665 CTTCAATAGAAACGA GCCCGCAG CAAT CTGCGGGC TTTTTCTTTATGGGC TERM 1597 1793668 - 1793687 + F 100 -15 -5.38054 | opp_overlap 1793665 1793668 CTTCAATAGAAACGA GCCCGCAG CAAT CTGCGGGC TTTTTCTTTATGGGC Pnuc_1722 1793728 - 1795500 + | glutaminyl-tRNA synthetase Pnuc_1723 1796377 - 1795481 - | NAD-dependent epimerase/dehydratase TERM 1598 1795511 - 1795539 + g 80 -5.9 -5.01845 | opp_overlap 1795512 1795513, overlap 1795512 1795513 AATAGTTTTCAGAAA ATCCGCTACGCTG GGA TAACGTAGCGGGG TTTTTAATTCTTGTA TERM 1599 1795538 - 1795512 - G 81 -8.7 -4.38154 | opp_overlap 1795512 1795511 1795513, overlap 1795513 ATAGTTTTCAGAAAA TCCGCTACGCT GGGAT AACGTAGCGGG GTTTTTAATTCTTGT TERM 1600 1795512 - 1795538 + g 72 -9.4 -3.5948 | opp_overlap 1795512 1795513, overlap 1795511 1795513 ATAGTTTTCAGAAAA TCCGCTACGCTG GGA TAACGTAGCGGG GTTTTTAATTCTTGT TERM 1601 1795513 - 1795537 + g 71 -10.7 -2.74061 | opp_overlap 1795512 1795513, overlap 1795512 1795511 TAGTTTTCAGAAAAT CCGCTACGCTG GGA TAACGTAGCGG GGTTTTTAATTCTTG TERM 1602 1795537 - 1795513 - G 81 -12.2 -3.2241 | opp_overlap 1795513 1795512 1795511, overlap 1795512 TAGTTTTCAGAAAAT CCGCTACGCT GGGAT AACGTAGCGG GGTTTTTAATTCTTG Pnuc_1724 1796399 - 1797445 + | CDP-6-deoxy-delta-3,4-glucoseen reductase argD 1797507 - 1798700 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein Pnuc_1726 1799436 - 1798723 - | ABC transporter related TERM 1603 1798922 - 1798911 - G 76 -4.4 -4.93316 | TAACAACATCAAAAA TGGT TTCC ACCA TGATGGGAGATAAGC Pnuc_1727 1800209 - 1799436 - | ABC transporter related TERM 1604 1800035 - 1800024 - G 79 -3 -5.33405 | overlap 1800027 GCCATCAAATAAAAA GATT CCAG AATC TGCTGGATAGAGCCC Pnuc_1728 1801297 - 1800206 - | inner-membrane translocator TERM 1605 1800969 - 1800955 - G 72 -6.4 -4.22214 | overlap 1800957 AGGCAGCCAAAACAA TAGCGA AGA TCGCCA CCATCCATGGTGAAA Pnuc_1729 1802225 - 1801290 - | inner-membrane translocator TERM 1606 1801632 - 1801617 - G 72 -6.2 -4.22009 | ACCACCCAACATAAA CGTAAT TGAG ATTACG CGATTAGGATTGACA TERM 1607 1802254 - 1802289 + r 86 -7.6 -5.08088 | opp_overlap 1802261, overlap 1802256 1802261 GAGTAATTTAAGCAA TAAAAAAGAGCACCAC TAAT GTGGCGCTCTTTTGAA TTTTTATTGCACATT TERM 1608 1802256 - 1802287 + r 73 -10.2 -2.77538 | opp_overlap 1802261, overlap 1802254 1802261 GTAATTTAAGCAATA AAAAAGAGCACCAC TAAT GTGGCGCTCTTTTG AATTTTTATTGCACA TERM 1609 1802261 - 1802282 + r 91 -10.1 -4.52505 | opp_overlap 1802261, overlap 1802256 1802254 TTAAGCAATAAAAAA GAGCACCAC TAAT GTGGCGCTC TTTTGAATTTTTATT TERM 1610 1802282 - 1802261 - R 100 -12.3 -5.5604 | opp_overlap 1802261 1802256 1802254 TTAAGCAATAAAAAA GAGCACCAC TAAT GTGGCGCTC TTTTGAATTTTTATT Pnuc_1730 1803474 - 1802293 - | extracellular ligand-binding receptor Pnuc_1731 1804439 - 1803504 - | hydroxymethylbutenyl pyrophosphate reductase TERM 1611 1803976 - 1803998 + g 80 -7.1 -4.65895 | gap 1 TCACTAGCTGGGAAT GTCAGCGTAT CCAC AT-CGCTGAC TTTTTCAATCAAGAA Pnuc_1732 1804895 - 1804449 - | peptidylprolyl isomerase, FKBP-type TERM 1612 1805549 - 1805572 + G 86 -3.2 -5.69068 | gap 1, overlap 1805550 TATTTCACTTTTAGA TCACTGC-ATT GTG AGTAGCAGTGG TTTTTTCTCTTTTTC Pnuc_1733 1804899 - 1805618 + | DNA repair protein RadC TERM 1613 1805964 - 1805951 - g 88 -8.1 -4.87665 | opp_overlap 1805951 1805949 1805941 CGTTATCGACAAAAA CGGCA TCGA TGCCG TGTTGTCTGATTTAC Pnuc_1734 1805766 - 1805999 + | ribosomal protein L28 TERM 1614 1806104 - 1806088 - g 75 -2.9 -5.11033 | CACAACTTCAAAAAA CAAGCGT ACA AAGCCTG AAAAGATGGAACTCA Pnuc_1735 1806011 - 1806178 + | ribosomal protein L33 TERM 1615 1806211 - 1806241 + T 88 -11.3 -3.49475 | opp_overlap 1806218, overlap 1806218 TGTTTCTTGCAAAAA AAAAAAACCCGCT ATATC AGCGGGTTTTTTA TTGTCTAAGCCTCCA TERM 1616 1806234 - 1806218 - T 100 -10.1 -6.79027 | opp_overlap 1806211 1806218 TGCAAAAAAAAAAAA CCCGCTA TAT CAGCGGG TTTTTTATTGTCTAA TERM 1617 1806218 - 1806234 + T 100 -9.4 -5.60689 | opp_overlap 1806218, overlap 1806211 TGCAAAAAAAAAAAA CCCGCT ATATC AGCGGG TTTTTTATTGTCTAA TERM 1618 1806250 - 1806274 + T 81 -11.5 -3.09175 | overlap 1806268 TTTTTTATTGTCTAA GCCTCCAAGAA GAA TTCTTAGAGGC TATTACGCCTTTATT Pnuc_1736 1807491 - 1806292 - | fatty acid desaturase Pnuc_1737 1808918 - 1807521 - | Fmu (Sun) domain-containing protein Pnuc_1738 1809706 - 1809077 - | phosphoribosylglycinamide formyltransferase Pnuc_1739 1809746 - 1810696 + | riboflavin biosynthesis protein RibF TERM 1619 1812011 - 1811999 - g 76 -4.8 -4.88736 | CAGTATGGATAAAAA GCCA ACAGA TGGC AAAGCTAGCTTGCGA TERM 1620 1812109 - 1812121 + G 71 -7.7 -3.89346 | GCATGATTGCCAATC GTCCA GAC TGGAC TTTGTCCCGTCAACG ileS 1810689 - 1813550 + | isoleucyl-tRNA synthetase Pnuc_1741 1813567 - 1814055 + | lipoprotein signal peptidase TERM 1621 1814234 - 1814245 + G 72 -5.8 -4.41616 | opp_overlap 1814227 CTATGCAAGCCCTCA CAGG CAAT CCTG TTTATTTGAGCCAAT TERM 1622 1814856 - 1814846 - g 72 -5.4 -4.42806 | TTAGCGCTAAAGAAA TGCA TGC TGCA ACTTTAAGCTTAACT Pnuc_1742 1814065 - 1815276 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Pnuc_1743 1815319 - 1815768 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Pnuc_1744 1815771 - 1816331 + | CMP/dCMP deaminase, zinc-binding TERM 1623 1816348 - 1816333 - T 83 -9 -3.98826 | opp_overlap 1816333 CTATTAATGCATAAA TCCACC CGAG GGTGGA TTTTTTTAAGAGCCA TERM 1624 1816333 - 1816348 + T 95 -9 -5.40072 | opp_overlap 1816333 CTATTAATGCATAAA TCCACC CGAG GGTGGA TTTTTTTAAGAGCCA Pnuc_1745 1817592 - 1816354 - | sodium:dicarboxylate symporter TERM 1625 1816496 - 1816482 - G 71 -3.4 -4.89562 | overlap 1816483 CTAAAATTAATAAAA CGCCCG CTT CTGGCA AGTTAAATTGGGAAA Pnuc_1746 1819014 - 1817605 - | fumarate lyase TERM 1626 1819099 - 1819085 - R 74 -4.2 -5.04987 | overlap 1819086 AATATTCTTAAAAAA TGGACT ATG AGTCCT CCAGCTTTCGTTTAA TERM 1627 1819098 - 1819086 - R 70 -7.7 -3.61908 | overlap 1819085 ATATTCTTAAAAAAT GGACT ATG AGTCC TCCAGCTTTCGTTTA TERM 1628 1819286 - 1819305 + r 70 -7.8 -3.6502 | opp_overlap 1819288, overlap 1819288 ATTTAGCCAATAAAA AAGCCACC CGCA GGTGGCTA TTTACATCAACGATG TERM 1629 1819303 - 1819288 - R 100 -10.4 -5.4833 | opp_overlap 1819286 1819288 TTAGCCAATAAAAAA GCCACC CGCA GGTGGC TATTTACATCAACGA TERM 1630 1819288 - 1819303 + r 77 -10.4 -3.40597 | opp_overlap 1819288, overlap 1819286 TTAGCCAATAAAAAA GCCACC CGCA GGTGGC TATTTACATCAACGA Pnuc_1747 1819556 - 1819323 - | hypothetical protein Pnuc_1748 1821890 - 1819584 - | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 1631 1820900 - 1820874 - G 75 -9.5 -3.56161 | opp_overlap 1820873 1820871 GAAGCGACGAGATAA CGCAGCATCTT TTTCG AAGATACCGCG GTATTCAGTAAAGGT Pnuc_1749 1822243 - 1821887 - | ATP-dependent Clp protease adaptor protein ClpS Pnuc_1750 1822519 - 1822722 + | cold-shock DNA-binding domain-containing protein TERM 1632 1822747 - 1822765 + F 100 -6.7 -5.75342 | opp_overlap 1822747 GATCATTATGAGAAA CTCAGGA CTTGT TCCTGGG TTTTTTTTCGCCCGC TERM 1633 1822991 - 1823018 + G 83 -9.9 -4.1891 | opp_overlap 1822990 1822994, overlap 1822994 CCTCATGAATCGAAC CAACATGCCAG CGAACT CAGGCATGTTG TTTGTATTCGAGCAA Pnuc_1751 1822806 - 1823258 + | hypothetical protein TERM 1634 1823290 - 1823319 + T 83 -12.3 -2.74792 | opp_overlap 1823296, overlap 1823296 TCTCATTGGGCAATA AAAAAACGCAGAC TGGA GTCTGCGTTTTTG CTTTAGAACTAGTGA TERM 1635 1823313 - 1823296 - T 100 -11.3 -5.7946 | opp_overlap 1823290 1823296 TGGGCAATAAAAAAA CGCAGAC TGGA GTCTGCG TTTTTGCTTTAGAAC TERM 1636 1823296 - 1823313 + T 95 -11.3 -4.98531 | opp_overlap 1823296, overlap 1823290 TGGGCAATAAAAAAA CGCAGAC TGGA GTCTGCG TTTTTGCTTTAGAAC Pnuc_1752 1823643 - 1823338 - | hypothetical protein Pnuc_1753 1824906 - 1823674 - | argininosuccinate synthase Pnuc_1754 1825925 - 1824945 - | ornithine carbamoyltransferase TERM 1637 1825781 - 1825793 + g 71 -7.7 -3.90762 | TTTTGAATTTGGCCT TCAGC CAA GCTGA TCTTTTTAGAAGGTA Pnuc_1755 1826044 - 1826346 + | hypothetical protein TERM 1638 1826388 - 1826368 - T 100 -9.7 -5.61881 | opp_overlap 1826367 CCTTAAAAACAAAAA CCCGCTC TGATCAG GAGCGGG CTTAGGTCGAAAATA Pnuc_1756 1826700 - 1826434 - | ribosomal protein S20 TERM 1639 1826540 - 1826565 + g 70 -9.7 -3.01125 | overlap 1826538 TCAATTGTTGCTTGA GTTGCCGCGAA TACT TTCGCTGCAGC TGCTTTATCACCAGT TERM 1640 1827829 - 1827844 + G 83 -4.6 -5.27335 | overlap 1827825 1827831 CCTATTGGCTGCGCC CAGCGC GATG GCGCTC TTTTTATTTGGCGAG TERM 1641 1827831 - 1827842 + G 74 -7.2 -4.27026 | overlap 1827825 1827829 TATTGGCTGCGCCCA GCGC GATG GCGC TCTTTTTATTTGGCG Pnuc_1757 1826852 - 1828405 + | integral membrane protein MviN Pnuc_1758 1828411 - 1829253 + | hypothetical protein TERM 1642 1829255 - 1829291 + T 87 -12.6 -3.37344 | opp_overlap 1829255 1829258 1829261, overlap 1829258 1829261 CTAAACTTCACTAGA GAATAAGTTAACTCAA ATTGC TTGCGTTAACTTATTC TTACTTGCGTCGGAA TERM 1643 1829291 - 1829255 - T 90 -13.3 -2.81966 | opp_overlap 1829255 1829258 1829261, overlap 1829258 1829261 CTAAACTTCACTAGA GAATAAGTTAACTCAAA TTG CTTGCGTTAACTTATTC TTACTTGCGTCGGAA TERM 1644 1829258 - 1829288 + T 77 -8.5 -3.82604 | opp_overlap 1829255 1829258 1829261, overlap 1829255 1829261 AACTTCACTAGAGAA TAAGTTAACTCAA ATTGC TTGCGTTAACTTA TTCTTACTTGCGTCG TERM 1645 1829288 - 1829258 - T 74 -9.2 -3.55219 | opp_overlap 1829258 1829255 1829261, overlap 1829255 1829261 AACTTCACTAGAGAA TAAGTTAACTCAAA TTG CTTGCGTTAACTTA TTCTTACTTGCGTCG Pnuc_1759 1829933 - 1829292 - | hypothetical protein TERM 1646 1829566 - 1829541 - G 72 -4.8 -4.64144 | gap 2, opp_overlap 1829542, overlap 1829531 1829543 AATAATTGGCAAAAA GCGTGCCAAGAC GATA GTCTTG-C-CGC CATGTTTTTCATAAA Pnuc_1760 1829989 - 1830990 + | tRNA delta(2)-isopentenylpyrophosphate transferase Pnuc_1761 1832053 - 1831001 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 1647 1832098 - 1832080 - H 73 -2.4 -5.2112 | overlap 1832082 AATATTAGTAAAAAA TGCTACTA GGT CAGTAGAA TCATTGAATTCTAGA Pnuc_1762 1832126 - 1833115 + | hypothetical protein Pnuc_1763 1833126 - 1833881 + | chromosomal replication initiator, DnaA Pnuc_1764 1833901 - 1834581 + | HAD family hydrolase TERM 1648 1834746 - 1834757 + G 72 -5.8 -4.44667 | opp_overlap 1834726 ACCCTGCAACAGGCT GGCT ATGA AGCC TTTATTGTTGGCGGC TERM 1649 1835953 - 1835942 - g 74 -7.2 -4.29106 | overlap 1835950 GCGGAGACGAAGAAA GCCG AAAT CGGC AGCGCCCTCAGAAGG Pnuc_1765 1834578 - 1835981 + | poly(A) polymerase Pnuc_1766 1836034 - 1836561 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1650 1837210 - 1837233 + G 70 -8.8 -3.44051 | CGATTGGCATTGGCG CTGGGCCAGA CTGC TCTGGCCAGG TTCTAGTGCTGCAGG Pnuc_1767 1836579 - 1837397 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Pnuc_1768 1838547 - 1837405 - | chaperone protein DnaJ TERM 1651 1838578 - 1838600 + r 100 -13.5 -3.97331 | opp_overlap 1838567 1838578 1838581, overlap 1838581 ACAACCTGAATGACA CAAGTCGGC ACGAG GCCGACTTG TTATTTAAGTACATT TERM 1652 1838600 - 1838578 - R 93 -13.5 -2.92513 | opp_overlap 1838578 1838581, overlap 1838567 1838581 ACAACCTGAATGACA CAAGTCGGC ACGAG GCCGACTTG TTATTTAAGTACATT TERM 1653 1838581 - 1838597 + r 86 -9.4 -4.10744 | opp_overlap 1838578 1838567 1838581, overlap 1838578 ACCTGAATGACACAA GTCGGC ACGAG GCCGAC TTGTTATTTAAGTAC TERM 1654 1838597 - 1838581 - R 77 -9.4 -3.60214 | opp_overlap 1838581 1838578, overlap 1838578 1838567 ACCTGAATGACACAA GTCGGC ACGAG GCCGAC TTGTTATTTAAGTAC Pnuc_1769 1840582 - 1838648 - | chaperone protein DnaK TERM 1655 1840707 - 1840679 - R 79 -11.2 -2.6162 | opp_overlap 1840679 1840686, overlap 1840678 1840686 CAAGGGGCGAAATAG CAAAAAAGGCAG AAAAA CTGCCTTTTTTA TGCTTTTTTGGAGAT TERM 1656 1840679 - 1840707 + r 72 -9 -3.38056 | opp_overlap 1840678 1840679 1840686, overlap 1840686 CAAGGGGCGAAATAG CAAAAAAGGCAG AAAAA CTGCCTTTTTTA TGCTTTTTTGGAGAT TERM 1657 1840686 - 1840700 + r 93 -7.1 -5.47914 | opp_overlap 1840679 1840678 1840686, overlap 1840679 CGAAATAGCAAAAAA GGCAG AAAAA CTGCC TTTTTTATGCTTTTT TERM 1658 1840700 - 1840686 - R 90 -7.1 -5.32699 | opp_overlap 1840686 1840679, overlap 1840679 1840678 CGAAATAGCAAAAAA GGCAG AAAAA CTGCC TTTTTTATGCTTTTT Pnuc_1770 1841284 - 1840730 - | GrpE protein hemH 1842442 - 1841348 - | ferrochelatase hrcA 1843503 - 1842493 - | heat-inducible transcription repressor TERM 1659 1843445 - 1843472 + g 80 -7 -4.72272 | GAGCCAATAGGCTGT CCCTCTTCGA TATAGCGC TCGATGAGGG TTTTTAGTAGGGCGC Pnuc_1773 1843541 - 1844446 + | NAD(+) kinase TERM 1660 1844885 - 1844871 - g 70 -10 -3.00022 | GCTAGTTGATATACA TGGGCA GCA TGCCCA TCAACTACTCCTCAA Pnuc_1774 1844473 - 1846143 + | DNA repair protein RecN Pnuc_1775 1848953 - 1846140 - | (glutamate--ammonia-ligase) adenylyltransferase TERM 1661 1850598 - 1850583 - g 72 -9 -3.54935 | overlap 1850572 TAAATGGGTGGTAAA CGCCAA GAGT TTGGCG CTCAGCAACCCTGAA TERM 1662 1851091 - 1851071 - g 70 -5.3 -4.42806 | overlap 1851072 TGAGTGCTAAACAAA TGCCCCTGA ATG TCAGTGGCG CAGCGCAAGGTGAGG Pnuc_1776 1849030 - 1853184 + | membrane protein-like protein Pnuc_1777 1853184 - 1854017 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pnuc_1778 1854043 - 1855533 + | peptidase U62, modulator of DNA gyrase TERM 1663 1855619 - 1855605 - g 79 -7.8 -4.52589 | CCGCTGTAGACAAAA CATCGG ATA CCGACG ATCAACGCATTGACA Pnuc_1779 1855553 - 1856677 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1664 1856703 - 1856723 + T 100 -8.4 -5.89827 | opp_overlap 1856703, overlap 1856687 CTCGTTTAGCTTAAA GAGACTAA TTTAT TTAGTCTC TTTTTTTTCGTGCTT TERM 1665 1856723 - 1856703 - T 72 -8.4 -3.59979 | opp_overlap 1856687 1856703 CTCGTTTAGCTTAAA GAGACTAA TTTAT TTAGTCTC TTTTTTTTCGTGCTT Pnuc_1780 1857281 - 1856712 - | ATP--cobalamin adenosyltransferase Pnuc_1781 1857309 - 1858814 + | D-lactate dehydrogenase (cytochrome) TERM 1666 1858904 - 1858881 - g 84 -5.2 -5.2853 | CAGGTAAAAATAAAA CGTCACTTTC AATT GAAGGTGGCG GCACAAAATCTTGGT Pnuc_1782 1858814 - 1859959 + | FAD linked oxidase domain-containing protein TERM 1667 1860846 - 1860813 - g 71 -3.9 -4.81851 | opp_overlap 1860815, overlap 1860805 1860815 AGCTAAAGCCAAAAA GATTTCAGCATTAAC AAAA GATATTGCTGAAATT CTTCCAGAGCTACAA glcF 1859968 - 1861248 + | glycolate oxidase iron-sulfur subunit Pnuc_1784 1861245 - 1861970 + | alanine racemase domain-containing protein Pnuc_1785 1861967 - 1862836 + | pyrroline-5-carboxylate reductase Pnuc_1786 1863723 - 1862860 - | 4-hydroxybenzoate polyprenyl transferase Pnuc_1787 1865748 - 1863733 - | ATP-dependent DNA helicase RecG TERM 1668 1864202 - 1864218 + g 76 -5.1 -4.82154 | opp_overlap 1864201 1864202 TCATTTGCCTTAAAG GCTGC CATGACA GCAGC TTTTTCATCTGACTT Pnuc_1788 1865833 - 1866879 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Pnuc_1789 1866852 - 1868033 + | queuine tRNA-ribosyltransferase Pnuc_1790 1868168 - 1868494 + | preprotein translocase, YajC subunit TERM 1669 1869449 - 1869466 + G 72 -6.3 -4.25104 | gap 1, overlap 1869447 1869464 CGAAGCTGCGCCTCC CGGAACGG ATA CC-TTCCG TTTTGGTGAAAACCA TERM 1670 1869644 - 1869629 - g 73 -7.6 -4.09864 | opp_overlap 1869635, overlap 1869619 AGTCACTCGCGAAAA CATTGG CAAG CCAATG GGCATGATCTTATTT Pnuc_1791 1868520 - 1870379 + | protein-export membrane protein SecD TERM 1671 1870941 - 1870952 + G 73 -4.4 -4.80455 | overlap 1870948 GGATTTTTCGCCTTC TTCC ATTG GGAA TTTTCTCTTTCAGTA secF 1870383 - 1871357 + | preprotein translocase subunit SecF Pnuc_1793 1872703 - 1871354 - | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein Pnuc_1794 1874091 - 1872712 - | adenylosuccinate lyase TERM 1672 1874268 - 1874255 - g 74 -3.8 -4.98857 | ATTCAACGAGAAAAA GGTC GATGTA GACC TAGAATTGGAGAATG TERM 1673 1874477 - 1874499 + G 76 -8.4 -4.12942 | ATGGGAAGCTCTAGC TGACGGCATT ATG GATGCCGGCA TTTTGGCCCGTTTGG Pnuc_1795 1874136 - 1874801 + | glutathione S-transferase domain-containing protein TERM 1674 1874845 - 1874826 - T 100 -10.8 -5.26875 | opp_overlap 1874826 TGCTGAATTAAAAAA GCCAATCA AAAC TGATTGGC TTTTTTCACGCCTAC TERM 1675 1874826 - 1874845 + T 93 -10.8 -5.02074 | opp_overlap 1874826 TGCTGAATTAAAAAA GCCAATCA AAAC TGATTGGC TTTTTTCACGCCTAC Pnuc_1796 1875989 - 1874877 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1676 1875372 - 1875386 + g 83 -6.4 -5.08015 | opp_overlap 1875372 CTCACCTATAAAACA GATTCC AGT GGAGTC TTTCTTTTTTGCATT TERM 1677 1876781 - 1876793 + G 76 -7.7 -4.29106 | AGAACAAATTGAATC CTTGG GTG CCAAG TTTGTTGATGTCCCA Pnuc_1797 1876167 - 1877297 + | NAD(P) transhydrogenase subunit alpha TERM 1678 1877638 - 1877628 - g 82 -3.2 -5.45652 | overlap 1877637 ATGTTCAAGAAAAAA GCTC CAA AAGC TGATGCGGCTGGAAC Pnuc_1798 1877322 - 1877660 + | putative transmembrane NAD(P) transhydrogenase transmembrane protein TERM 1679 1878675 - 1878654 - g 72 -8.1 -3.68506 | CAACACGCACTCAAA GAGTTAACC GAAA AGTTAACTC ACCATGGCGTTACTG Pnuc_1799 1877694 - 1879061 + | NAD(P) transhydrogenase, beta subunit TERM 1680 1879079 - 1879109 + F 100 -14.2 -4.85177 | opp_overlap 1879086, overlap 1879086 ACCCCACATGCCCAC TGAAAAAGGCTGCT ATT AGCAGCCTTTTTTG TTTTTCATATAGTTT TERM 1681 1879102 - 1879086 - f 100 -12.3 -4.66163 | opp_overlap 1879079 1879086 ATGCCCACTGAAAAA GGCTGCT ATT AGCAGCC TTTTTTGTTTTTCAT TERM 1682 1879086 - 1879102 + F 100 -12.3 -5.95286 | opp_overlap 1879086, overlap 1879079 ATGCCCACTGAAAAA GGCTGCT ATT AGCAGCC TTTTTTGTTTTTCAT Pnuc_1800 1879207 - 1880046 + | hypothetical protein Pnuc_1801 1880903 - 1880064 - | glycosyl transferase family protein Pnuc_1802 1880993 - 1881826 + | hypothetical protein Pnuc_1803 1881840 - 1882643 + | hypothetical protein TERM 1683 1882685 - 1882663 - T 93 -7.7 -5.52023 | opp_overlap 1882663 ACCAGTAATAAAAAA TGCCCAGTC TTTCG AACCGGGCA TTTTTTTATTTTATT TERM 1684 1882663 - 1882685 + T 100 -4.8 -6.17669 | opp_overlap 1882663 ACCAGTAATAAAAAA TGCCCAGT CTTTCGA ACCGGGCA TTTTTTTATTTTATT Pnuc_1804 1883402 - 1882707 - | hypothetical protein TERM 1685 1883422 - 1883454 + r 78 -10.7 -2.93393 | opp_overlap 1883427, overlap 1883427 CTACTTTACCAAATA AAAAACGCCTGGT CTTTTGA ACCAGGCGTTTTA GTTTCTACAGTCAAG TERM 1686 1883427 - 1883449 + r 91 -10.6 -4.61873 | opp_overlap 1883427, overlap 1883422 TTACCAAATAAAAAA CGCCTGGT CTTTTGA ACCAGGCG TTTTAGTTTCTACAG TERM 1687 1883449 - 1883427 - R 100 -11.3 -5.68438 | opp_overlap 1883427 1883422 TTACCAAATAAAAAA CGCCTGGTC TTTTG AACCAGGCG TTTTAGTTTCTACAG Pnuc_1805 1885144 - 1883492 - | chaperonin GroEL TERM 1688 1883623 - 1883640 + g 79 -4.1 -5.13741 | opp_overlap 1883617 1883625, overlap 1883617 GGCCAGCAACAGAAG CAGCATT TACC AATGCAG TTTTTGTTACCTTAG TERM 1689 1884139 - 1884158 + g 78 -5 -4.9138 | overlap 1884141 CTTTAGCATCGCCAG CACCATCA ATGA TGATGGTA TTTTCTTTGCCTACT TERM 1690 1884141 - 1884156 + g 73 -7.6 -4.07285 | overlap 1884139 TTAGCATCGCCAGCA CCATCA ATGA TGATGG TATTTTCTTTGCCTA Pnuc_1806 1885463 - 1885173 - | chaperonin Cpn10 TERM 1691 1885373 - 1885402 + g 78 -4.9 -5.00339 | overlap 1885375 CAGGCTTTTCTGCAG CAGCATCAGGAAT GATG ATTCCAGAAGCAG TTTTTGATTCTTGAT Pnuc_1807 1885779 - 1886621 + | putative diguanylate phosphodiesterase Pnuc_1808 1886621 - 1887244 + | two component LuxR family transcriptional regulator Pnuc_1809 1887252 - 1889672 + | histidine kinase TERM 1692 1890666 - 1890652 - gT 87 -8.6 -4.62783 | overlap 1890639 CACCCACTGGAAAAA GTGGAA ACG TTCCAC TCGCCGCAAGACTTC Pnuc_1811 1892296 - 1891208 - | Sua5/YciO/YrdC/YwlC family protein Pnuc_1810 1889721 - 1891262 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Pnuc_1812 1893483 - 1892299 - | phosphoribosylaminoimidazole carboxylase, ATPase subunit Pnuc_1813 1893982 - 1893488 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1693 1893859 - 1893871 + g 70 -4.8 -4.45544 | overlap 1893861 CGTCAGGCATGCGAT GTGC AGAAA GCAC TTTTGCTTCATGAGC Pnuc_1814 1894919 - 1894023 - | phosphoribosylaminoimidazole-succinocarboxamide synthase Pnuc_1815 1895991 - 1894927 - | fructose-1,6-bisphosphate aldolase Pnuc_1816 1897468 - 1896032 - | pyruvate kinase TERM 1694 1896442 - 1896417 - G 83 -6.3 -5.08824 | gap 1, opp_overlap 1896417 GTTTGATCTAAAAAA TCTGTATCCAAT TTC ACTGGAT-CAGA TTTCTCCGCCTCTAT TERM 1695 1897209 - 1897221 + g 75 -6.3 -4.43213 | overlap 1897216 ATAAATTTTTCACCT TCTTG AAG CAAGA TTTTGCTGTCTTCAA Pnuc_1817 1898682 - 1897471 - | phosphoglycerate kinase Pnuc_1818 1898876 - 1899799 + | branched-chain amino acid aminotransferase Pnuc_1819 1899824 - 1900012 + | hypothetical protein Pnuc_1820 1900059 - 1901090 + | lipopolysaccharide heptosyltransferase II Pnuc_1821 1901113 - 1901547 + | hypothetical protein Pnuc_1822 1901557 - 1902177 + | hypothetical protein Pnuc_1823 1903867 - 1902179 - | peptidase M48, Ste24p Pnuc_1824 1903900 - 1904376 + | molybdenum cofactor biosynthesis protein C TERM 1696 1904404 - 1904423 + T 79 -3.6 -5.41746 | AAACTATTGATTCAT TTCAATCA GATC TGAATGAA TTTTTTTAAGCACTT Pnuc_1825 1905963 - 1904392 - | TPR repeat-containing protein TERM 1697 1905354 - 1905384 + g 73 -11.3 -2.51547 | opp_overlap 1905358, overlap 1905352 AATATTCAGGATTGA GCAATAGAGCTTT ATCAC AATGCTCTATTGC CTCTTCGTATAAACC TERM 1698 1906322 - 1906288 - g 79 -2.4 -5.55664 | overlap 1906290 1906291 TGATCATGAAAAAAA TAC-GGCAGATGATTA CGATT TAATCATC-GCCAATA CTGTAATTTCCGTAC TERM 1699 1906319 - 1906290 - g 75 -6.6 -4.41456 | gap 1, overlap 1906288 1906291 ATCATGAAAAAAATA CGGCAGATGATTA CGATT TAATCATC-GCCA ATACTGTAATTTCCG TERM 1700 1906413 - 1906434 + G 72 -6.7 -4.28774 | opp_overlap 1906413 AATACTTTTTTAACA TTATTAGGA AATC TCCTGATAA TTTTCGCTTGGATGA Pnuc_1826 1906109 - 1907083 + | glycosyl transferase, group 1 Pnuc_1827 1909383 - 1907098 - | TPR repeat-containing protein TERM 1701 1909419 - 1909441 + r 89 -12 -3.77666 | opp_overlap 1909423 GATAGGTGGGCGTGA TACAGCCGCT TAT AGCGGCCGTA TTTGGATTCAATCTA TERM 1702 1909437 - 1909423 - R 80 -11.4 -2.87132 | opp_overlap 1909419 GGTGGGCGTGATACA GCCGCT TAT AGCGGC CGTATTTGGATTCAA Pnuc_1828 1909975 - 1909463 - | fimbrial protein pilin TERM 1703 1910049 - 1910077 + r 75 -10.4 -2.94144 | opp_overlap 1910054, overlap 1910054 GTGAGTGAGCTATAA AAAAAGCCGGTT ATTTA AACCGGCTTTTC TGATTTAAGTGAAGG TERM 1704 1910054 - 1910072 + r 91 -10.3 -4.62168 | opp_overlap 1910054, overlap 1910049 TGAGCTATAAAAAAA GCCGGTT ATTTA AACCGGC TTTTCTGATTTAAGT TERM 1705 1910072 - 1910054 - R 100 -10.3 -5.64274 | opp_overlap 1910049 1910054 TGAGCTATAAAAAAA GCCGGTT ATTTA AACCGGC TTTTCTGATTTAAGT TERM 1706 1910106 - 1910117 + r 74 -4.4 -4.87626 | overlap 1910092 GGTTAGTTAAGCCCT TGCT TGCT AGCA TTTTTCCTCTTGAAA Pnuc_1829 1910803 - 1910093 - | integral membrane protein TerC TERM 1707 1910871 - 1910852 - R 100 -10.7 -5.35459 | opp_overlap 1910852 ACATATTACAAAAAA GGCGCTG TTTTAG CAGCGCC TTTTTCTTTACTCTT TERM 1708 1910852 - 1910871 + r 100 -11.4 -5.37171 | opp_overlap 1910852 ACATATTACAAAAAA GGCGCTGT TTTA GCAGCGCC TTTTTCTTTACTCTT Pnuc_1830 1911784 - 1910891 - | succinyl-CoA synthetase subunit alpha TERM 1709 1911062 - 1911074 + g 78 -4.8 -4.9181 | opp_overlap 1911062 TACGCCAGCAATAAA GCCA ACCAC TGGC TTTTTCATATTCTCT sucC 1912969 - 1911800 - | succinyl-CoA synthetase subunit beta TERM 1710 1912930 - 1912948 + g 71 -9.6 -3.23395 | opp_overlap 1912929 CAGGCACATTAAATT GGCGAAGA AGT TCTTTGCC TTGGTACTCGTGAAT Pnuc_1832 1913675 - 1913157 - | regulatory protein RecX TERM 1711 1913635 - 1913612 - G 72 -5.2 -4.61868 | opp_overlap 1913620, overlap 1913614 1913620 CACGGAGAGATAAAA GGCGCAAAGC CCGA GCTTTGAGAC TCGGGCTTTTTTTGG TERM 1712 1913620 - 1913641 + g 100 -10.9 -5.63857 | gap 1, opp_overlap 1913614 1913612 1913620 GATAAAAGGCGCAAA GCCCGAG-CT TTG AGACTCGGGC TTTTTTTGGATTTTT TERM 1713 1913641 - 1913620 - G 86 -10.9 -3.67737 | gap 1, opp_overlap 1913620, overlap 1913614 1913612 GATAAAAGGCGCAAA GCCCGAG-CT TTG AGACTCGGGC TTTTTTTGGATTTTT Pnuc_1833 1914771 - 1913680 - | recA protein Pnuc_1834 1915423 - 1914890 - | hypothetical protein TERM 1714 1915453 - 1915476 + H 93 -12.4 -3.87149 | opp_overlap 1915453 TCAGCCTAAGAAAAA GGCCACTGCC GCTG GGCAATGGCC TTTAGATTTGGTGGC TERM 1715 1915476 - 1915453 - H 100 -14.6 -5.08601 | opp_overlap 1915453 TCAGCCTAAGAAAAA GGCCACTGCC GCTG GGCAATGGCC TTTAGATTTGGTGGC TERM 1716 1915625 - 1915642 + H 79 -4.9 -5.14563 | opp_overlap 1915625, overlap 1915620 TATTTGGTTTGTAAA GTGTTAC TTGC GTAATAC TTTTTTCATAACGCA TERM 1717 1916183 - 1916171 - g 72 -2.7 -5.01535 | CTATAAGCACAAAAA CAGTT AGT AACTA CGCAAAAGTATTAGA Pnuc_1835 1915705 - 1916781 + | hypothetical protein Pnuc_1836 1916778 - 1917407 + | hypothetical protein TERM 1718 1917491 - 1917509 + G 72 -10.4 -2.87344 | opp_overlap 1917491, overlap 1917493 AATAAGGACATTGAA TACCTGAT TGA ATCAGGTA TATGTGACGAGGGTG TERM 1719 1917509 - 1917491 - g 74 -10.4 -3.17382 | opp_overlap 1917491 1917493 AATAAGGACATTGAA TACCTGAT TGA ATCAGGTA TATGTGACGAGGGTG Pnuc_1837 1917410 - 1917745 + | hypothetical protein Pnuc_1838 1917738 - 1918142 + | hypothetical protein Pnuc_1839 1918720 - 1918139 - | phage integrase family protein TERM 1720 1918923 - 1918941 + H 77 -9.6 -3.51556 | opp_overlap 1918914 1918912, overlap 1918921 GAAACACGCAGACTT GCGTATAG CGT CTATGCGC TGTTTAAGTTGTTCT Pnuc_1840 1919113 - 1919307 + | hypothetical protein TERM 1721 1919360 - 1919343 - g 75 -2.7 -5.21683 | opp_overlap 1919343, overlap 1919345 ACTCAAAAAAATAAA TTTGTAG AAAA CTACAGA GGTTTTGTTTTTGGT Pnuc_1841 1919319 - 1919801 + | hypothetical protein Pnuc_1842 1920406 - 1919831 - | hypothetical protein TERM 1722 1920048 - 1920062 + g 78 -5.8 -4.74801 | GCTTTGATATTGCCT TGTAAT TTA ATTACA TTTTTAATCGCATTA TERM 1723 1920525 - 1920502 - R 90 -12.6 -3.53722 | CCCATAGTCATATAA CTAAGCATTG CGTC CAATGCTTAG CCCATAACCACCTAA Pnuc_1843 1921095 - 1920553 - | hypothetical protein Pnuc_1844 1921219 - 1921665 + | hypothetical protein Pnuc_1845 1923610 - 1922198 - | phage integrase family protein TERM 1724 1923777 - 1923753 - R 100 -8.7 -6.04419 | opp_overlap 1923753 AAAACAAGAAAAAAA GACTTAGAG TTTTTGG CTCTAAGTC TTTGATTTACAACAT TERM 1725 1923753 - 1923777 + r 86 -10.1 -4.06055 | opp_overlap 1923753 AAAACAAGAAAAAAA GACTTAGAGTT TTT GGCTCTAAGTC TTTGATTTACAACAT Pnuc_1846 1924373 - 1923942 - | hypothetical protein TERM 1726 1924324 - 1924349 + g 76 -4.7 -4.85782 | opp_overlap 1924324 CAAAAGAATAACAAT GCCATTTGAGT GAGG ACAAAAATGGC TTTCTTTTTAAGAGG Pnuc_1847 1924430 - 1924750 + | secreted protein Pnuc_1848 1924769 - 1925380 + | MOSC domain-containing protein TERM 1727 1925405 - 1925386 - T 100 -10 -5.80364 | opp_overlap 1925386 1925385 ATGGGAATAAAAAAA CCCGACCA TTGC TGATCGGG CTTCTTATTTACAAC Pnuc_1849 1927104 - 1925434 - | major facilitator transporter Pnuc_1850 1928014 - 1927385 - | hypothetical protein TERM 1728 1927857 - 1927844 - G 72 -6.7 -4.25283 | ATTTTCTGACCAAAA TGGAG GAAT CTCCA AAATGATGTCGCGAA Pnuc_1851 1928104 - 1928796 + | maleylacetoacetate isomerase Pnuc_1852 1929342 - 1928818 - | hexapaptide repeat-containing transferase Pnuc_1854 1929593 - 1929955 + | hypothetical protein Pnuc_1855 1930000 - 1930287 + | hypothetical protein TERM 1729 1930351 - 1930318 - T 84 -8.2 -4.80178 | opp_overlap 1930321, overlap 1930320 1930321 GACTAAGCAACAAAA CAGCCCAGCTTGTA TTAACT TACAAGCTGGGTTT TTATTTGTATTTGCC TERM 1730 1930349 - 1930320 - T 88 -10.8 -4.00694 | opp_overlap 1930321, overlap 1930318 1930321 CTAAGCAACAAAACA GCCCAGCTTGTA TTAACT TACAAGCTGGGT TTTTATTTGTATTTG TERM 1731 1930348 - 1930321 - T 95 -14.3 -2.99332 | opp_overlap 1930321, overlap 1930320 1930318 TAAGCAACAAAACAG CCCAGCTTGTA TTAACT TACAAGCTGGG TTTTTATTTGTATTT TERM 1732 1930321 - 1930348 + T 100 -14.3 -5.48623 | opp_overlap 1930321 1930320 1930318 TAAGCAACAAAACAG CCCAGCTTGTA TTAACT TACAAGCTGGG TTTTTATTTGTATTT Pnuc_1856 1930721 - 1930332 - | OsmC family protein TERM 1733 1930387 - 1930418 + g 78 -5.3 -5.06816 | AATGCTTTATGAATT GGACATTTATTAG CAATCT CTAATAAACGTTC TTTTTCTTCCACACT Pnuc_1857 1931169 - 1930759 - | rhodanese domain-containing protein Pnuc_1858 1931228 - 1932490 + | hypothetical protein Pnuc_1859 1932558 - 1933904 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 1734 1934147 - 1934135 - g 89 -9.1 -4.68994 | opp_overlap 1934135 1934132 ATGAGCACTCAAAAA GCGCT TTA AGCGC TGATATTATTTTTTG Pnuc_1860 1933894 - 1934361 + | hypothetical protein Pnuc_1861 1934416 - 1935255 + | CBS domain-containing protein Pnuc_1862 1935264 - 1936775 + | apolipoprotein N-acyltransferase TERM 1735 1936758 - 1936768 + F 86 -8.2 -4.97312 | overlap 1936751 ATCTGGGCCCTTATC CGCC TAA GGCG TTTTTAGTTCATTTT glyQ 1936836 - 1937720 + | glycyl-tRNA synthetase subunit alpha TERM 1736 1938458 - 1938445 - g 75 -6.7 -4.53475 | opp_overlap 1938442, overlap 1938442 ACTTTAGAAAAACAA GCCAA CGTA TTGGC AAGCTTTGATAAACG TERM 1737 1939370 - 1939360 - g 73 -2.4 -5.10208 | GAAGTTCAAGAAAAA GCGG ATG CTGC AGCTATCTACGAATT glyS 1937752 - 1939890 + | glycyl-tRNA synthetase subunit beta Pnuc_1865 1939887 - 1940459 + | histidinol-phosphate phosphatase family protein TERM 1738 1940807 - 1940818 + G 71 -7.2 -4.12902 | overlap 1940803 TTCCGTTCTTTGGCT GGGC TTTA GCCC TTTTAAAGATGATTC Pnuc_1866 1940467 - 1941201 + | phospholipid/glycerol acyltransferase Pnuc_1867 1941995 - 1941219 - | dimethyladenosine transferase Pnuc_1868 1943006 - 1941999 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1739 1942592 - 1942555 - GR 71 -6.4 -4.16842 | gap 1, opp_overlap 1942555 1942561, overlap 1942561 TTGAGCCCCAAGAAA CCAGAAGGTAATGTTGC ACAAA GCATCATTACC-TCTCG TTTTGCATGACAACG TERM 1740 1942555 - 1942592 + gr 71 -6.4 -4.18018 | gap 1, opp_overlap 1942555 1942561, overlap 1942561 TTGAGCCCCAAGAAA CCAGAAGGTAATGTTGC ACAAA GCATCATTACC-TCTCG TTTTGCATGACAACG TERM 1741 1942561 - 1942587 + gr 73 -9.5 -3.11281 | opp_overlap 1942555 1942561, overlap 1942555 CCCAAGAAACCAGAA GGTAATGTTGC ACAAA GCATCATTACC TCTCGTTTTGCATGA TERM 1742 1942587 - 1942561 - GR 79 -9.5 -3.68962 | opp_overlap 1942561 1942555, overlap 1942555 CCCAAGAAACCAGAA GGTAATGTTGC ACAAA GCATCATTACC TCTCGTTTTGCATGA Pnuc_1869 1944435 - 1942981 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1743 1943919 - 1943933 + gr 87 -5 -5.46706 | opp_overlap 1943919, overlap 1943921 ATATAAAGTTATCAA TTTCAG CAT CTGAGA TTTTTATTTTGGCAT Pnuc_1870 1946885 - 1944435 - | organic solvent tolerance protein TERM 1744 1947551 - 1947536 - g 72 -6.2 -4.21812 | opp_overlap 1947535 1947533 CCTTATTGAAAATAA TTTAGC ACAA GCTAAA GTGTATGTTCATCGT Pnuc_1871 1946988 - 1947989 + | aminoglycoside phosphotransferase TERM 1745 1947999 - 1947984 - f 77 -6.2 -4.65263 | ACCCGCCAAAATAAA GAGTAA ATCA TTACTC AATATGAATACCGTC Pnuc_1872 1948003 - 1948713 + | nucleotidyl transferase Pnuc_1873 1948700 - 1950076 + | peptidase M24 Pnuc_1874 1950092 - 1951249 + | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 1746 1951326 - 1951306 - f 73 -9.8 -3.21993 | opp_overlap 1951301 1951306, overlap 1951301 1951299 ATCTAGAACAGGTAA TCTGCCTA TTTTT TAGGCAGA TTTAGCCTTGAATGT TERM 1747 1951306 - 1951326 + F 79 -9.8 -3.67417 | opp_overlap 1951306 1951301 1951299, overlap 1951301 ATCTAGAACAGGTAA TCTGCCTA TTTTT TAGGCAGA TTTAGCCTTGAATGT Pnuc_1875 1951402 - 1952418 + | nifR3 family TIM-barrel protein Pnuc_1876 1952469 - 1952708 + | Fis family transcriptional regulator TERM 1748 1952803 - 1952791 - g 71 -3.3 -4.82901 | opp_overlap 1952792, overlap 1952792 CGTTTCCGATAAAAA TGGCA TCG TGCCT TTTGCCAAATCTCTT TERM 1749 1952792 - 1952802 + G 71 -6.8 -4.10925 | opp_overlap 1952791 1952792 GTTTCCGATAAAAAT GGCA TCG TGCC TTTTGCCAAATCTCT TERM 1750 1952967 - 1952946 - g 72 -5.1 -4.56775 | gap 1, opp_overlap 1952946 1952944 ATGGTCGCGTAAAAA CCTTGCATCC GAT GG-TGCATGG TGGTTTATTGGCTCG TERM 1751 1953816 - 1953806 - g 72 -5.4 -4.45945 | overlap 1953811 ACTGATGAAGCAAAA GCAA TCT TTGC AGCAAAACAAAATGT TERM 1752 1954283 - 1954303 + G 79 -9.7 -3.78953 | opp_overlap 1954286, overlap 1954286 ATCGCTGCAGCCAAT GAACATGGC ATC GCCATGATC TTTACTGGTACACGT TERM 1753 1954300 - 1954286 - g 73 -10 -3.37344 | opp_overlap 1954286 1954283 GCTGCAGCCAATGAA CATGGC ATC GCCATG ATCTTTACTGGTACA purH 1952753 - 1954333 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Pnuc_1878 1954340 - 1954858 + | crossover junction endodeoxyribonuclease RuvC TERM 1754 1955395 - 1955383 - g 86 -9.1 -4.41633 | overlap 1955380 TACTCCGAAAAAGAA GCGCT TTT AGCGC TGAAGCAAATCCCAC Pnuc_1879 1954888 - 1955469 + | Holliday junction DNA helicase RuvA ruvB 1955487 - 1956557 + | Holliday junction DNA helicase B Pnuc_1881 1957805 - 1956573 - | tyrosyl-tRNA synthetase TERM 1755 1958959 - 1958938 - g 100 -10.1 -5.38054 | GCCCATAAAGAAAAA CGGCCAGCA AATT TGCCAGCCG TTACGGGAGCGAAGG anmK 1957882 - 1959009 + | anhydro-N-acetylmuramic acid kinase Pnuc_1883 1959396 - 1959022 - | iron-sulfur cluster assembly accessory protein argC 1960523 - 1959465 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1756 1960606 - 1960589 - R 100 -10.5 -5.38054 | opp_overlap 1960589 TTGTAGAAACAAAAA GGGCCGC TTGC GCGACCC TTTCGATAAAACTTA TERM 1757 1960589 - 1960606 + r 73 -8.3 -3.65827 | opp_overlap 1960589 TTGTAGAAACAAAAA GGGCCGC TTGC GCGACCC TTTCGATAAAACTTA Pnuc_1885 1961037 - 1960636 - | ribosomal protein S9 rplM 1961475 - 1961047 - | 50S ribosomal protein L13 TERM 1758 1961661 - 1961643 - H 100 -10.3 -5.86332 | opp_overlap 1961658 GTAACCCAAAAAAAA CCCAGGA ACGAG TCCTGGG TTGGAATCCACCTAT TERM 1759 1962007 - 1961995 - g 71 -7.7 -3.85817 | opp_overlap 1961999 AGCTGGCGGCAGAAA CCTTG CTC CAAGG CCAATGGAGCTGCTT Pnuc_1887 1961885 - 1962307 + | OsmC family protein Pnuc_1888 1963730 - 1962672 - | dihydroorotase Pnuc_1889 1965084 - 1963732 - | hydroxypyruvate reductase TERM 1760 1964349 - 1964374 + g 77 -7 -4.42619 | opp_overlap 1964338 1964340 1964348, overlap 1964338 1964341 TAAGTACCGATACAG GTATCGATTG TTCATC TAATCGATAC TTTTCTAAGATATTG Pnuc_1890 1966917 - 1965094 - | ABC transporter related TERM 1761 1965924 - 1965936 + g 73 -7.7 -4.15066 | overlap 1965922 ACATACGATCCATGT CAGTC AAT GACTG TTTAATTTCTCGATA TERM 1762 1966679 - 1966668 - G 72 -5.8 -4.46215 | overlap 1966655 CATAGGCAAAAATAA TGCC CAGA GGCA CGACTAGAAGGGCTT TERM 1763 1966857 - 1966871 + g 93 -10 -4.67353 | opp_overlap 1966859 GAATAACCCGCCAAT CACCTC GTT GAGGTG TTTTTGAATCAGTAC Pnuc_1891 1967385 - 1966927 - | NUDIX hydrolase Pnuc_1892 1969216 - 1967417 - | aspartyl-tRNA synthetase Pnuc_1893 1969886 - 1969233 - | hypothetical protein TERM 1764 1969900 - 1969916 + r 85 -12.3 -3.14132 | opp_overlap 1969900 ATGTGTTCTACCTAA CCCGCTA TTT TAGCGGG TTAGTAGCCAAGCGG TERM 1765 1969916 - 1969900 - R 84 -12.3 -3.05463 | opp_overlap 1969900 ATGTGTTCTACCTAA CCCGCTA TTT TAGCGGG TTAGTAGCCAAGCGG Pnuc_1894 1971525 - 1969939 - | 2-polyprenylphenol 6-hydroxylase Pnuc_1895 1972149 - 1971529 - | hypothetical protein TERM 1766 1972162 - 1972177 + r 86 -10.4 -4.07568 | opp_overlap 1972162 CATAAGTGTAAAAAA CCCGCA CTAG TGCGGG TTTTCCAACGGAAAG TERM 1767 1972177 - 1972162 - R 93 -10.4 -5.11033 | opp_overlap 1972162 CATAAGTGTAAAAAA CCCGCA CTAG TGCGGG TTTTCCAACGGAAAG Pnuc_1896 1973114 - 1972203 - | import inner membrane translocase, subunit Tim44 Pnuc_1897 1973925 - 1973182 - | ubiquinone/menaquinone biosynthesis methyltransferase Pnuc_1898 1974311 - 1973925 - | hypothetical protein Pnuc_1899 1978150 - 1974311 - | FAD linked oxidase domain-containing protein TERM 1768 1975112 - 1975100 - G 73 -4.1 -4.87133 | ACCCGGGAAATAAAA CACTG CCT CAGTA TCCGAAGAGGTTGTT TERM 1769 1975450 - 1975467 + g 71 -9.9 -3.17229 | overlap 1975448 GCTGCTGACCCATTT TGCGCAA AAGA TTGCGCA TATTCATGGTCACCT Pnuc_1900 1978285 - 1979805 + | threonine dehydratase, biosynthetic Pnuc_1901 1979817 - 1980734 + | 5-nucleotidase queF 1980752 - 1981579 + | 7-cyano-7-deazaguanine reductase TERM 1770 1981579 - 1981614 + T 82 -12 -3.04398 | opp_overlap 1981584, overlap 1981584 CCATGCGCGCCAATA AAAAACCCCTTGTAGG AAAT CCTAGAAGGGGTTTTG GTTTTCAAACAACAA TERM 1771 1981584 - 1981609 + T 100 -11.9 -4.67038 | opp_overlap 1981584, overlap 1981579 CGCGCCAATAAAAAA CCCCTTGTAGG AAAT CCTAGAAGGGG TTTTGGTTTTCAAAC TERM 1772 1981609 - 1981584 - T 100 -11.9 -5.4505 | opp_overlap 1981584 1981579 CGCGCCAATAAAAAA CCCCTTGTAGG AAAT CCTAGAAGGGG TTTTGGTTTTCAAAC Pnuc_1903 1982107 - 1981652 - | single-strand binding protein TERM 1773 1981929 - 1981959 + g 74 -5.4 -4.62772 | opp_overlap 1981934 ATTTCTGCAAGCTTG CCAAAGAATGCAAC GCG GTGCCATTCTGTGG TTTCTTTCATTTCGC Pnuc_1904 1983373 - 1982189 - | major facilitator transporter TERM 1774 1984798 - 1984783 - g 72 -9 -3.62176 | overlap 1984776 1984773 AAGAATATTTTGAAA CCCTTG AGCT CAAGGG TGCCAAACGAGAAAT Pnuc_1905 1983411 - 1986299 + | excinuclease ABC, A subunit TERM 1775 1986321 - 1986297 - T 100 -7.4 -5.95286 | opp_overlap 1986301 AGCAAAAAGAAAAAA TAAACTAAAA CGCTT TTTTAGTTTA TAAATCTCAGAGTAA Pnuc_1906 1988310 - 1986328 - | potassium efflux system protein TERM 1776 1988792 - 1988778 - g 74 -5.6 -4.58663 | ACCAGCGTTGAAAAA GAGGCG TGC CCCCTC AATCTCGCACCCACT Pnuc_1907 1988322 - 1989314 + | KpsF/GutQ family protein Pnuc_1908 1989344 - 1989916 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Pnuc_1909 1989920 - 1990561 + | hypothetical protein Pnuc_1910 1990563 - 1991135 + | OstA family protein Pnuc_1911 1991132 - 1991899 + | ABC transporter related TERM 1777 1992379 - 1992369 - g 82 -5.4 -5.13648 | GAAACACAAAGAAAA GATC CAA GATC ATCATCACGAGAAGC Pnuc_1912 1992082 - 1992405 + | sigma 54 modulation protein/ribosomal protein S30EA Pnuc_1913 1992439 - 1992900 + | putative PTS IIA-like nitrogen-regulatory protein PtsN Pnuc_1914 1992897 - 1993883 + | HPr kinase/phosphorylase TERM 1778 1993935 - 1993945 + GT 76 -8.2 -4.11216 | opp_overlap 1993929 TCAGGTAAATCAGTA GCCC TGA GGGC TTTTGAAGATGCAGG TERM 1779 1994241 - 1994223 - gT 72 -8.2 -3.67877 | overlap 1994221 1994226 AGCGCCCAACAAACA CAATCAGC AAC ACTGATTG AAGCGATTGATCGTG Pnuc_1916 1995867 - 1994722 - | A/G-specific adenine glycosylase Pnuc_1915 1993887 - 1994777 + | hypothetical protein TERM 1780 1994937 - 1994923 - GT 82 -8.5 -4.18197 | opp_overlap 1994916 ATGTTTGATGTAAAA CCCCC TGTTT GGGGG TGTGCAATTTCTCAA TERM 1781 1995046 - 1995026 - GT 74 -3.9 -5.00616 | overlap 1995027 TCCTCTTTTAAAAAA CTGAGGTCC CTC GGAGCCCAA GGCGATTCCGGTAAA TERM 1782 1995219 - 1995237 + gT 76 -3.1 -5.24531 | overlap 1995220 TGAGGTTTGCCTGAC AGTCCTT AGCAA AAGGACA TTTTTTCTCACCACT Pnuc_1917 1996688 - 1995852 - | formamidopyrimidine-DNA glycosylase TERM 1783 1998140 - 1998124 - g 89 -6.6 -5.29445 | CTGGAACAATAAAAA CCAGTT AGAAA AACTGG TGATGAACCGTAGCT Pnuc_1918 1996724 - 1998208 + | outer membrane lipoprotein LolB TERM 1784 1998616 - 1998629 + G 100 -8.1 -5.1971 | TAGGTTTGAAACTGG GGGCA GATG TGCCC TTTTTCATTTTTGGT Pnuc_1919 1998201 - 1999085 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Pnuc_1920 1999222 - 2000187 + | ribose-phosphate pyrophosphokinase Pnuc_1921 2000323 - 2000964 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 1785 2000989 - 2001012 + F 100 -13.2 -5.0133 | opp_overlap 2000992 2000994, overlap 2000994 CATTCTTTGCGTAGA GAAGACCCGC GCAA GCGGGTTTTC TTTTTTGCGGAAATA TERM 1786 2001007 - 2000994 - f 75 -9.5 -3.31726 | opp_overlap 2000989 2000994, overlap 2000992 TTTGCGTAGAGAAGA CCCGC GCAA GCGGG TTTTCTTTTTTGCGG TERM 1787 2000994 - 2001007 + F 100 -9.5 -5.42198 | opp_overlap 2000994 2000992, overlap 2000989 TTTGCGTAGAGAAGA CCCGC GCAA GCGGG TTTTCTTTTTTGCGG TERM 1788 2001438 - 2001423 - g 71 -10.4 -2.7556 | opp_overlap 2001421, overlap 2001420 AAGCCCATTTAAGTA CGCCAG AATA CTGGCG CCTTCGCTTAGGTAT Pnuc_1922 2001050 - 2001640 + | aminoacyl-tRNA hydrolase TERM 1789 2001635 - 2001651 + T 70 -9.5 -2.61943 | overlap 2001631 GAGCTGCATTCTAAG GCTTAAC TCA GTTAAGC TGAATTGGCTTTTTT Pnuc_1923 2001912 - 2001646 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein coaD 2002427 - 2001930 - | phosphopantetheine adenylyltransferase Pnuc_1925 2003054 - 2002464 - | putative methyltransferase Pnuc_1926 2004411 - 2003074 - | peptidase M16 domain-containing protein TERM 1790 2003609 - 2003635 + g 74 -11 -2.82015 | opp_overlap 2003614, overlap 2003609 2003614 TGGGCCTGTTGGGAA TCAAAGGGAATT TGA ATTTCCCTTTGA TCTAATGGCTCTACA Pnuc_1927 2005778 - 2004411 - | peptidase M16 domain-containing protein TERM 1791 2006582 - 2006604 + G 75 -9.8 -3.58037 | opp_overlap 2006580, overlap 2006597 TGTTACTAAGTTAGA TGGCACCGCC AAA GGGGGTGTCA TTTGCGCCCTTGCTC Pnuc_1928 2005842 - 2006732 + | signal recognition particle-docking protein FtsY TERM 1792 2006787 - 2006761 - f 75 -10.3 -3.15732 | overlap 2006759 AGAATTAATAAACCA TTAGCACTCTC TTGAC AAGAGTGCTAA AATAGACTTCTATTA Pnuc_1929 2006825 - 2007754 + | RNA polymerase, sigma 32 subunit, RpoH TERM 1793 2007799 - 2007829 + T 72 -10.5 -2.55351 | gap 1, opp_overlap 2007789 2007801, overlap 2007798 2007801 ACAATTCTTTTAAGT CATGCGCCAAGGTC TCTG GTCCTTGG-GCATG CTTAATATACAAGCG Pnuc_1930 2008366 - 2007776 - | electron transport protein SCO1/SenC Pnuc_1931 2009261 - 2008368 - | protoheme IX farnesyltransferase Pnuc_1932 2010388 - 2009258 - | cytochrome oxidase assembly Pnuc_1933 2011044 - 2010388 - | putative transmembrane protein Pnuc_1934 2011769 - 2011047 - | SURF1 family protein TERM 1794 2011530 - 2011515 - G 79 -4.6 -5.12172 | opp_overlap 2011515 2011517, overlap 2011517 CATTAACAAATAAAA CCCTGC TTGG GCAGTG TTGCCTTCCCCGCCT Pnuc_1935 2011856 - 2012068 + | hypothetical protein TERM 1795 2012112 - 2012086 - T 100 -9.4 -5.20216 | opp_overlap 2012090, overlap 2012090 TAGAGCACCAAAAAA TGAATCGGGGCT TAA AGCCCCGATTTT TATTTTGCTTACATC TERM 1796 2012108 - 2012090 - T 100 -14.6 -3.96447 | opp_overlap 2012090, overlap 2012086 GCACCAAAAAATGAA TCGGGGCT TAA AGCCCCGA TTTTTATTTTGCTTA TERM 1797 2012090 - 2012108 + T 100 -14.6 -5.54338 | opp_overlap 2012090 2012086 GCACCAAAAAATGAA TCGGGGCT TAA AGCCCCGA TTTTTATTTTGCTTA Pnuc_1936 2012975 - 2012121 - | cytochrome c oxidase, subunit III Pnuc_1937 2013202 - 2013005 - | putative transmembrane protein Pnuc_1938 2013792 - 2013211 - | cytochrome c oxidase assembly protein CtaG/Cox11 Pnuc_1939 2015551 - 2013920 - | cytochrome-c oxidase TERM 1798 2014351 - 2014335 - G 72 -5.7 -4.4572 | overlap 2014337 AACATTGCAAACAAA GAGCCGG CAA CCAGCAC ATAGTGAAAGTGGGC Pnuc_1940 2016749 - 2015592 - | cytochrome c oxidase, subunit II TERM 1799 2016882 - 2016869 - R 70 -5.9 -4.4634 | AAGCTCAACAACAAA CCGGG ATAA CCCAG CCTAAGCCAATCTTG Pnuc_1941 2017685 - 2016930 - | methyltransferase type 11 TERM 1800 2018260 - 2018240 - g 73 -4 -4.85195 | overlap 2018229 2018242 AAAACAATTCAAAAA TTGCCTTA TGCAT TAAGGCGA CATCACAATATAGGA Pnuc_1942 2017754 - 2018497 + | phosphoribosyltransferase TERM 1801 2018690 - 2018710 + G 73 -7.6 -4.16842 | gap 1, opp_overlap 2018689 2018690 TTTGCCAGCATCAAG GTGCACCCC AATT GGGGT-CAC TTTCTTGAAACTGAA Pnuc_1943 2018516 - 2018986 + | RNA methyltransferase Pnuc_1944 2020024 - 2019002 - | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 1802 2019881 - 2019894 + g 75 -6.7 -4.45083 | GCCTGGGAGATAGGC CTGGT TTTC ACCAG TTTTCTCAATCTCCA Pnuc_1945 2020570 - 2020049 - | protein-export protein SecB TERM 1803 2020523 - 2020498 - G 72 -8.4 -3.75629 | gap 1, opp_overlap 2020498 2020497 2020495 GATCTTTAAGGTAAA CGCG-CTGAAT ACGAA ATTCAGGCGCG CTATCTTTTTCAGTA TERM 1804 2020631 - 2020608 - R 76 -7.4 -4.29106 | CTTTACATCAATAAA GGATCAAGCT TTCC AGCGCGATCC AAAGCAACTAAATCA Pnuc_1946 2020849 - 2020595 - | glutaredoxin 3 Pnuc_1947 2021273 - 2020860 - | rhodanese domain-containing protein Pnuc_1948 2021296 - 2021985 + | phosphoglycerate mutase 1 family protein Pnuc_1949 2021999 - 2023432 + | carboxyl-terminal protease Pnuc_1950 2023459 - 2024211 + | UBA/THIF-type NAD/FAD binding protein Pnuc_1951 2025967 - 2024216 - | phosphoenolpyruvate-protein phosphotransferase TERM 1805 2025930 - 2025912 - G 76 -8.8 -3.77806 | opp_overlap 2025911 2025912, overlap 2025910 CGCGATATCAAAACA GCCTTGCC AAT GGCAATGC CTTTCGATACCGGAA Pnuc_1952 2026239 - 2025970 - | phosphotransferase system, phosphocarrier protein HPr Pnuc_1953 2026678 - 2026256 - | PTS system fructose subfamily IIA component Pnuc_1954 2027621 - 2026680 - | glutathione synthetase Pnuc_1955 2028948 - 2027650 - | glutamate--cysteine ligase TERM 1806 2029002 - 2028978 - R 95 -12.2 -4.65263 | gap 1, overlap 2028980 ATTTTTTAAAAGAAA GACGCGGGATC CTAG GATCCCGCG-C TTAAAACTAGGCAGC TERM 1807 2029001 - 2028980 - R 100 -15.9 -3.93868 | overlap 2028978 TTTTTAAAAGAAAGA CGCGGGATC CTAG GATCCCGCG CTTAAAACTAGGCAG TERM 1808 2029034 - 2029009 - R 83 -9 -4.07687 | overlap 2029027 ATCCCGCGCTTAAAA CTAGGCAGCT AACCAA AGCCGCCCAG TGAGGGGTAAATCTA Pnuc_1956 2030538 - 2029054 - | ammonium transporter Pnuc_1957 2030890 - 2030552 - | nitrogen regulatory protein P-II Pnuc_1958 2031751 - 2030915 - | putative signal peptide protein TERM 1809 2031292 - 2031282 - G 82 -6.8 -4.73635 | GAGAACTTAATAAAA CCAG TTA CTGG GCCAAATGTAGCGTT Pnuc_1959 2032015 - 2032272 + | hypothetical protein Pnuc_1960 2032878 - 2032297 - | hypothetical protein Pnuc_1961 2033881 - 2032871 - | lipoyl synthase Pnuc_1962 2034522 - 2033878 - | lipoate-protein ligase B Pnuc_1963 2034798 - 2034532 - | hypothetical protein Pnuc_1964 2035532 - 2034816 - | alpha/beta fold family hydrolase Pnuc_1965 2035871 - 2035563 - | putative ferredoxin 2fe-2s protein Pnuc_1966 2036982 - 2035888 - | VanZ family protein TERM 1810 2035948 - 2035937 - G 70 -2.2 -4.9138 | ATCATCCAAATAAAA GCTA AAGG CAGC CAAATGACTGAAACC TERM 1811 2036166 - 2036151 - G 82 -7.6 -4.58283 | CAATCGTTCCAAAAA GCATTC CCCA GAATGC ACCGGCCGTTAACCA Pnuc_1967 2037020 - 2037808 + | biotin--acetyl-CoA-carboxylase ligase Pnuc_1968 2037805 - 2038617 + | Baf family transcriptional activator Pnuc_1969 2039114 - 2038626 - | rfaE bifunctional protein TERM 1812 2039473 - 2039499 + G 75 -9.5 -3.53012 | AAAGATCGAGGCTTT GTCGTTTTAGG ATTCC CCTCAAACGAC TTTGGACAACAAGAA Pnuc_1970 2039206 - 2039787 + | glutathione peroxidase TERM 1813 2040504 - 2040471 - g 72 -10.3 -2.79133 | opp_overlap 2040474, overlap 2040474 2040499 CAATGGCTGACGATA CAAGGCGGTTCACGC GAAT ACGTCAAACGCCTTG TCAAAGCCTTAGAAA Pnuc_1971 2039784 - 2041172 + | amine oxidase TERM 1814 2041743 - 2041724 - g 78 -6.4 -4.72986 | TAGTCTCAGTAAAAA CAATGCTG TTTA CCGCATTG AACTACATGAAGACC Pnuc_1972 2041173 - 2041958 + | hypothetical protein Pnuc_1973 2041955 - 2043250 + | cyclopropane-fatty-acyl-phospholipid synthase Pnuc_1974 2043247 - 2044023 + | short-chain dehydrogenase/reductase SDR Pnuc_1975 2044694 - 2044047 - | DSBA oxidoreductase Pnuc_1976 2045322 - 2044708 - | sporulation domain-containing protein TERM 1815 2045039 - 2045049 + g 72 -5.4 -4.46112 | overlap 2045034 GGGGCAGGTGCTTTA CCTT GCA AAGG TTTATTTAGGTCCAA Pnuc_1977 2047088 - 2045361 - | arginyl-tRNA synthetase TERM 1816 2046760 - 2046745 - G 73 -7.6 -4.08767 | GTCAGCTGGCCAAAA TGGGTT CCAG AACCCA GAATTTCACTTACTA Pnuc_1978 2047124 - 2047441 + | hypothetical protein Pnuc_1979 2050188 - 2047438 - | methionine synthase TERM 1817 2047586 - 2047573 - G 74 -3.7 -4.9138 | ATGAGCCAAATAAAA CCCGC TCAC GCTGG ATGCAGGATTCATGG TERM 1818 2049275 - 2049291 + g 83 -4.3 -5.27335 | overlap 2049269 2049277 TCGAGCAGACGCTCT GTTGGCG TCT TGCCATC TTTTTCTTTAAAGCG Pnuc_1980 2051249 - 2050185 - | methionine synthase Pnuc_1982 2052775 - 2051690 - | beta-lactamase domain-containing protein TERM 1819 2051860 - 2051833 - G 71 -3.5 -4.87803 | overlap 2051828 2051820 CACGCTTAAATAAAA CCGGCACTAT-CT CTCG AGCAT-GCGCCGG TTTTTTACATGCGCC TERM 1820 2052258 - 2052273 + g 79 -3.2 -5.30686 | opp_overlap 2052258, overlap 2052266 ATATTGCTGTAGTAA TTCGAG CGCG CCCGAA TTTTTTCTAAATCTT TERM 1821 2052291 - 2052309 + g 82 -11 -3.5882 | overlap 2052266 TTTTCTAAATCTTCT GGCGTGGT TAA ACCATGCC TTTGAAAATGGTCTG Pnuc_1983 2052812 - 2052988 + | hypothetical protein Pnuc_1984 2053980 - 2052997 - | alcohol dehydrogenase Pnuc_1985 2054068 - 2054364 + | hypothetical protein Pnuc_1986 2054375 - 2054875 + | flavin reductase domain-containing protein Pnuc_1987 2054904 - 2055566 + | glutathione S-transferase domain-containing protein Pnuc_1988 2058648 - 2055613 - | acriflavin resistance protein Pnuc_1989 2059795 - 2058656 - | RND family efflux transporter MFP subunit TERM 1822 2058804 - 2058816 + g 70 -9.1 -3.30619 | GAGACTTGATCGCCA CGGGT TGC ACCCG TTGTCACAAATACTT TERM 1823 2058847 - 2058859 + g 74 -5.5 -4.64992 | GTTGAGCCTCTAATG CAGGG TTA CCTTG TTTATCTTTTTTACC Pnuc_1990 2061506 - 2059965 - | RND efflux system outer membrane lipoprotein Pnuc_1991 2063524 - 2061692 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing Pnuc_1992 2065044 - 2063524 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 1824 2064995 - 2065009 + g 80 -10 -3.90112 | AGTACTTTGGGCAGG GCGGAT TTC ATCCGC TTTCCTTGCCCAGCA Pnuc_1993 2065949 - 2065041 - | PP-loop domain-containing protein Pnuc_1994 2066383 - 2065988 - | dihydroneopterin aldolase Pnuc_1995 2067232 - 2066411 - | short-chain dehydrogenase/reductase SDR Pnuc_1996 2067258 - 2068445 + | hypothetical protein Pnuc_1997 2069579 - 2068449 - | polynucleotide adenylyltransferase region Pnuc_1998 2070487 - 2069579 - | NAD-dependent epimerase/dehydratase Pnuc_1999 2072402 - 2070516 - | lytic transglycosylase, catalytic TERM 1825 2071647 - 2071662 + g 77 -9 -3.88438 | TTGTCCAATGACTCC CCAAGC AACA GCTTGG TTCTCTTTGCTATAG TERM 1826 2072412 - 2072391 - G 82 -13 -3.06133 | TAATTTCTCAGCGAA GGCGCTGG GCATGG CCAGCGCC AGCCCCAAAATGAAA Pnuc_2000 2072548 - 2073174 + | 5-formyltetrahydrofolate cyclo-ligase Pnuc_2001 2074033 - 2073203 - | 5,10-methylenetetrahydrofolate reductase TERM 1827 2073740 - 2073710 - G 76 -9.1 -3.78953 | gap 1 ATTGGCATGATGAAA CTCGCCATACTGAC CCAT GCCAG-ATGGCAAG TCACCGCGCAAAGCC TERM 1828 2073988 - 2073999 + g 74 -5.8 -4.56597 | GATGCAGCTTACTCT CACC TTCA GGTG TTTTTGGAGGAAAGA Pnuc_2002 2075516 - 2074071 - | S-adenosyl-L-homocysteine hydrolase TERM 1829 2075095 - 2075083 - G 72 -5.5 -4.45068 | AGGTGCAATAACAAA GTAGC ATC GCCAC CGTCATCCAAAATCA TERM 1830 2075587 - 2075557 - R 73 -8.2 -3.96327 | ATGCTGGAGTAGAAA CTCGCTAGCCATTG AAT CATGGGTTAGCGAG CGCGGTTGCAATTAG TERM 1831 2075683 - 2075712 + r 100 -16.7 -3.61178 | opp_overlap 2075685 AACGCTCCTTGAAGG TATGCCGTAATTG TAAA CAATTACGGCATA TTTCGCCTCAATACA TERM 1832 2075710 - 2075685 - R 95 -14.9 -2.52464 | opp_overlap 2075683 CGCTCCTTGAAGGTA TGCCGTAATTG TAAA CAATTACGGCA TATTTCGCCTCAATA Pnuc_2003 2076917 - 2075751 - | methionine adenosyltransferase TERM 1833 2077816 - 2077799 - g 86 -4.1 -5.49809 | CAAAGCGCAAAAAAA TTGGCCA AGGC TGGCTAA TGCAAGCAACCCGTC Pnuc_2004 2077036 - 2077983 + | lipid A biosynthesis acyltransferase Pnuc_2005 2078001 - 2078900 + | lipid A biosynthesis acyltransferase Pnuc_2006 2078959 - 2079813 + | diaminopimelate epimerase pyrE 2080500 - 2079832 - | orotate phosphoribosyltransferase TERM 1834 2080463 - 2080443 - G 70 -4.7 -4.5442 | overlap 2080438 2080444 2080445 CTCCGAAGGACAAAA CCTTTGCCT CTA AGGCAAAAC GAATAAAGTTATCTT Pnuc_2008 2080509 - 2081291 + | exodeoxyribonuclease III Xth Pnuc_2009 2082535 - 2081288 - | major facilitator transporter Pnuc_2010 2083199 - 2082606 - | methionine biosynthesis protein MetW metX 2084335 - 2083196 - | homoserine O-acetyltransferase TERM 1835 2083424 - 2083403 - G 76 -4.5 -4.93365 | GCTCACAACCAAAAA CTTAGCT TGCACTTC AGCTAAG GCACGATTGAGGCTG TERM 1836 2083770 - 2083756 - G 72 -5.7 -4.53303 | opp_overlap 2083755 2083751 2083756 CAGGGTCAGACAAAA TGGCA TTGCG TGCCA CTTCGTTAAATGCGA slmA 2084982 - 2084332 - | nucleoid occlusion protein TERM 1837 2084366 - 2084386 + g 70 -9.7 -3.06796 | opp_overlap 2084364 2084361, overlap 2084369 CGCAAACTAACATCG GAGGCTTCC GTT GGGAGCTTC TTAAATCCGCTACGC Pnuc_2013 2085903 - 2085001 - | acetylglutamate kinase TERM 1838 2085258 - 2085242 - G 71 -9.5 -3.1478 | opp_overlap 2085242 2085241, overlap 2085240 ATCACGCCAGGAATA TTGGTCA TCA TGACCAA CTTCTCTGCGTGCAG TERM 1839 2085872 - 2085849 - G 76 -9 -3.71848 | gap 1, opp_overlap 2085830, overlap 2085830 GCGCTTCAGCAAGAA TCTCCGCCTTT AAT AAAGG-GGAGA TATCACTAATAGTTG Pnuc_2014 2086405 - 2085917 - | TraR/DksA family transcriptional regulator TERM 1840 2086343 - 2086363 + g 89 -11.1 -4.09739 | TTTTACGGCTTTGGC GCTCGCAGC TTT GCTGCTAGC TTTTGCCGCAGTTGC Pnuc_2015 2087579 - 2086518 - | cobalamin synthesis protein, P47K TERM 1841 2086894 - 2086920 + g 81 -12.4 -3.13403 | overlap 2086893 TCGTGACTATGGTCG TGACCACAATCA GCA TGATCGTGGTCA TCTTGCTCGAGAAAA TERM 1842 2087300 - 2087313 + g 89 -5.3 -5.63236 | TTTCAATGACAACGC GATCA AAGC TGATC TTTTTATTTTTGCGT Pnuc_2016 2088650 - 2087649 - | phage integrase family protein Pnuc_2017 2089305 - 2088631 - | hypothetical protein TERM 1843 2089184 - 2089168 - G 78 -12.3 -2.54325 | opp_overlap 2089166 2089163, overlap 2089167 2089165 CTCTTGCAAAGAGAT CGCACGA TCT TCGTGCG GATGCTTAATGCGAA Pnuc_2018 2090802 - 2089333 - | glutamyl-tRNA(Gln) amidotransferase, B subunit Pnuc_2019 2092319 - 2090802 - | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 1844 2091106 - 2091127 + g 89 -6.5 -5.37345 | opp_overlap 2091093 2091106 AATGCGGCCTGGAAA TCTGCCGCA ATAA TGCGACGGA TTTTTTGTGCTTGAA Pnuc_2020 2092609 - 2092316 - | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 1845 2093069 - 2093087 + G 71 -3.8 -4.8622 | overlap 2093071 CGAATCTGCATTAGG TGCTGGTG CAT CACAAGTA TTTTTGATTGAAGAG Pnuc_2021 2092671 - 2093714 + | cell shape determining protein MreB TERM 1846 2093808 - 2093836 + G 100 -16.9 -4.54727 | CTGATTGTCTGTCTG TCGATCAGCATCG CTC TGATGCTGATCGA TTTTCGTTTCAAAGC Pnuc_2022 2093739 - 2094674 + | rod shape-determining protein MreC Pnuc_2023 2094671 - 2095195 + | rod shape-determining protein MreD TERM 1847 2096650 - 2096636 - g 70 -10 -3.06915 | opp_overlap 2096646 AGCTAGCGCACGCAA TGGCGA ATC TCGCCA ACAATGGCGTTGTGA Pnuc_2024 2095204 - 2097111 + | peptidoglycan glycosyltransferase Pnuc_2025 2097093 - 2098244 + | rod shape-determining protein RodA TERM 1848 2098304 - 2098275 - T 100 -18.1 -3.3907 | opp_overlap 2098282, overlap 2098282 TCAAATCCTAAGCAA TAAAAAAGCCCGG CATG CCGGGCTTTTTTA TCAACAAAGCAAGAA TERM 1849 2098282 - 2098297 + T 100 -11.8 -5.24129 | opp_overlap 2098275 2098282 CTAAGCAATAAAAAA GCCCGG CATG CCGGGC TTTTTTATCAACAAA TERM 1850 2098297 - 2098282 - T 100 -11.8 -5.5604 | opp_overlap 2098282, overlap 2098275 CTAAGCAATAAAAAA GCCCGG CATG CCGGGC TTTTTTATCAACAAA Pnuc_2026 2098640 - 2098320 - | histone family protein DNA-binding protein Pnuc_2027 2099083 - 2098718 - | hypothetical protein TERM 1851 2098823 - 2098836 + g 70 -2.5 -5.00616 | AGCCACTTTTTTTCC TAAAT TTGC ATTTA TTTTTTGCGCCACAG Pnuc_2028 2099222 - 2100136 + | aspartyl/asparaginyl beta-hydroxylase Pnuc_2029 2100448 - 2100152 - | hypothetical protein Pnuc_2030 2100471 - 2101136 + | carbonate dehydratase Pnuc_2031 2101143 - 2102042 + | lipid A biosynthesis acyltransferase Pnuc_2032 2102068 - 2102820 + | metallophosphoesterase Pnuc_2033 2102828 - 2104246 + | protein kinase Pnuc_2034 2105581 - 2104253 - | C4-dicarboxylate transporter DctA TERM 1852 2104981 - 2104968 - G 87 -9.5 -4.26903 | opp_overlap 2104957, overlap 2104953 GCCATTGCACCAAAA GCGCC GATT GGCGC AAATTTCATGATGAT Pnuc_2035 2105683 - 2106420 + | pseudouridine synthase Pnuc_2036 2106584 - 2108107 + | peptide chain release factor 3 Pnuc_2037 2108619 - 2108386 - | hypothetical protein TERM 1853 2108702 - 2108712 + H 71 -6.8 -3.98113 | TTAGGGGGATCTTTT GAGC ACG GCTC TTTGGTTCATCATTC TERM 1854 2108934 - 2108951 + H 100 -12.7 -5.38047 | opp_overlap 2108928 2108934 CGGCGTAAATACCAA GCCCCGA TATT TCGGGGC TTTTTTATGTCCGTC TERM 1855 2108951 - 2108934 - H 90 -12.7 -3.45571 | opp_overlap 2108934, overlap 2108928 CGGCGTAAATACCAA GCCCCGA TATT TCGGGGC TTTTTTATGTCCGTC Pnuc_2038 2109040 - 2109435 + | GCN5-related N-acetyltransferase Pnuc_2039 2109457 - 2110101 + | phosphoglycerate mutase Pnuc_2040 2110136 - 2110906 + | MltA-interacting MipA family protein Pnuc_2041 2111901 - 2110939 - | hypothetical protein TERM 1856 2111965 - 2111978 + r 80 -8.1 -4.45151 | opp_overlap 2111965 TCTGAGAACAAAAAA CCACC CGAA GGTGG TTTTGATTGAGTCTT TERM 1857 2111978 - 2111965 - R 100 -8.1 -5.55769 | opp_overlap 2111965 TCTGAGAACAAAAAA CCACC CGAA GGTGG TTTTGATTGAGTCTT Pnuc_2042 2112246 - 2112001 - | hypothetical protein Pnuc_2043 2113475 - 2112432 - | alpha/beta hydrolase fold TERM 1858 2114528 - 2114506 - g 73 -11.2 -2.52795 | opp_overlap 2114504 AATGCTGCTAACTTA GGGCCAGCCC CAG AGGCTGCCCC AATTGATGAGCAAGG TERM 1859 2115689 - 2115678 - g 72 -5.8 -4.53648 | TACAGAAAAGACAAA GTGG ACCG CCAC TCGAGCAGATCTCGT Pnuc_2044 2113678 - 2115831 + | catalase/peroxidase HPI TERM 1860 2115855 - 2115878 + T 95 -11.8 -4.41494 | opp_overlap 2115858 GACTAGTTTGGCTAA TAAGAGGGGC TATC GCTCCTCTTA TTTTGATTAGAAATA Pnuc_2045 2116316 - 2115918 - | glutathione S-transfersae-related protein Pnuc_2046 2117010 - 2116327 - | haloacid dehalogenase, type II TERM 1861 2116654 - 2116665 + g 83 -4.4 -5.39681 | opp_overlap 2116626, overlap 2116628 2116625 ATTAGAAAGAATCGC GGTA GAGA TACC TTTTTGTTTAATTGT TERM 1862 2116729 - 2116709 - G 72 -6.1 -4.30844 | opp_overlap 2116726, overlap 2116710 AGGCTATCATCAAAA CCAGTAAGC TTG GCATACTGA TCCATCAGTCGCTTC Pnuc_2047 2117440 - 2117081 - | hypothetical protein TERM 1863 2117481 - 2117494 + r 70 -8.1 -3.74077 | opp_overlap 2117481 ATCTAAATGAAAAAA CCACC CGAA GGTGG TTTAGGTGTCTACCA TERM 1864 2117494 - 2117481 - R 93 -8.1 -5.38497 | opp_overlap 2117481 ATCTAAATGAAAAAA CCACC CGAA GGTGG TTTAGGTGTCTACCA Pnuc_2048 2117998 - 2117549 - | hypothetical protein Pnuc_2049 2118495 - 2118184 - | hypothetical protein Pnuc_2050 2119209 - 2118559 - | hypothetical protein Pnuc_2051 2120084 - 2119323 - | hypothetical protein TERM 1865 2119788 - 2119798 + g 79 -4 -5.10461 | opp_overlap 2119788 TAAGGGTAAAGCAAA TTCA CTA TGAA TTTTTCTTCGATGCC TERM 1866 2120214 - 2120197 - R 70 -8.5 -3.42699 | ATGGAGGGAGCAGAA TTGAGGT CTTA ACCTCAA CCATCAGGCTCCATG TERM 1867 2120456 - 2120446 - R 76 -3.2 -5.21506 | AGAACAAGATAAAAA TAGG CTT CCCA ATACTTACTGAAAGT Pnuc_2052 2121051 - 2120479 - | cyclase/dehydrase TERM 1868 2120839 - 2120851 + g 72 -2.7 -5.02074 | AACTTTTGCCTCAAC TATTC CTG GGATA TTTTTTGAGCCCTCA TERM 1869 2120960 - 2120946 - G 71 -10 -3.16055 | opp_overlap 2120948, overlap 2120936 2120935 GAAACCGCCCATCAA TAGGCG TCA CGCCTA CTTGAACATCAAAAG Pnuc_2053 2122132 - 2121143 - | catalase domain-containing protein TERM 1870 2122124 - 2122111 - G 79 -2.3 -5.45802 | overlap 2122112 CGGTGAAAAGAAAAA TGCCA AGTT TGGCG CGGTTCATATTTTTA Pnuc_2054 2122571 - 2122152 - | CHRD domain-containing protein Pnuc_2055 2123608 - 2122715 - | LysR family transcriptional regulator TERM 1871 2122764 - 2122778 + g 88 -8.6 -4.81249 | TTCTTAAATATCGTA GCTATC GGA GATAGC TTTTTGCCTTTAGGG TERM 1872 2123868 - 2123852 - g 75 -6.6 -4.41348 | TTTGCTTTAAACAAA TCAGGA TTTAC TCCTGA GATTGCGATTAGTCT Pnuc_2056 2123693 - 2124652 + | hypothetical protein Pnuc_2057 2124670 - 2125524 + | hypothetical protein TERM 1873 2125629 - 2125611 - T 76 -3.1 -5.18371 | TGTTACAAAAGAAAA TAGTCCA ATAGG TGGGCTA TCGACTAGAGCCGAG Pnuc_2058 2126240 - 2125656 - | uracil-DNA glycosylase superfamily protein Pnuc_2059 2127121 - 2126255 - | K+ channel inward rectifier domain-containing protein TERM 1874 2127198 - 2127185 - R 86 -4.5 -5.38497 | opp_overlap 2127185 2127186, overlap 2127186 ACGCAAATGAAAAAA CCACC CGAA GGTGA TTTTGGTGTTTCTTG Pnuc_2060 2128361 - 2127255 - | patatin TERM 1875 2128428 - 2128415 - R 76 -2.3 -5.4387 | opp_overlap 2128415 ACACAAATGAAAAAA CCACC CGAA GGTCG TTTTGGTGTCTCTTG TERM 1876 2128855 - 2128876 + r 100 -11.6 -5.44721 | CGCAGTAACCATCTT TGCCCGCA GAGATA TGCGGGCA TTTTTTTGACCTCAT TERM 1877 2128942 - 2128929 - R 93 -8.1 -5.37593 | opp_overlap 2128924 2128929 GTCCAAATGAAAAAA CCACC CGAA GGTGG TTTTGGTGTTTCTTG TERM 1878 2128929 - 2128942 + r 82 -8.1 -4.55446 | opp_overlap 2128929, overlap 2128924 GTCCAAATGAAAAAA CCACC CGAA GGTGG TTTTGGTGTTTCTTG TERM 1879 2129320 - 2129307 - R 91 -8.1 -5.27779 | opp_overlap 2129302 2129307 GCTAATATGAAAAAA CCACC CGAA GGTGG TTTTGGTGTTTCTTG TERM 1880 2129307 - 2129320 + r 82 -8.1 -4.55446 | opp_overlap 2129307, overlap 2129302 GCTAATATGAAAAAA CCACC CGAA GGTGG TTTTGGTGTTTCTTG TERM 1881 2129592 - 2129608 + r 70 -9.5 -2.71765 | overlap 2129591 2129587 CTCCATTACTCGCAA TGTCGTT TAA AACGACA ATTCATTTGCGCTAT Pnuc_2061 2130574 - 2130137 - | hypothetical protein TERM 1882 2131240 - 2131258 + H 73 -7.4 -4.04927 | opp_overlap 2131230 2131236 2131241, overlap 2131241 GACAAGCGAAATCAC AGGCGAAT GTA ATTCGCCC TTGTTTAATAATTAC TERM 1883 2131257 - 2131241 - H 78 -10.9 -3.04183 | opp_overlap 2131240 2131241, overlap 2131230 2131236 ACAAGCGAAATCACA GGCGAAT GTA ATTCGCC CTTGTTTAATAATTA TERM 1884 2131241 - 2131257 + H 78 -10.9 -3.02233 | opp_overlap 2131230 2131241 2131236, overlap 2131240 ACAAGCGAAATCACA GGCGAAT GTA ATTCGCC CTTGTTTAATAATTA Pnuc_2062 2131313 - 2132089 + | hypothetical protein Pnuc_2063 2132259 - 2132825 + | phage integrase family protein TERM 1885 2132866 - 2132886 + T 81 -2.6 -5.65177 | GGTAATGCTATTTTT TAGTTAAG CGGGC CTTTACTA TTTTTTTATAGATCT Pnuc_2064 2133739 - 2132858 - | hypothetical protein TERM 1886 2133944 - 2133928 - g 74 -7.3 -4.30719 | overlap 2133929 CCCTGTTACAACAAA CGTCCTT TTA AAGGACA CAACCAAAGTAGCTA Pnuc_2065 2133881 - 2134663 + | hypothetical protein TERM 1887 2134671 - 2134695 + F 73 -7.1 -4.08557 | opp_overlap 2134672, overlap 2134672 CTGCTTAATTAATCA AGGGGAATGTT ATG AGCGTTCCCCA TTCTTATTTGAAAGG TERM 1888 2134672 - 2134694 + F 78 -10.6 -3.04652 | opp_overlap 2134672, overlap 2134671 TGCTTAATTAATCAA GGGGAATGTT ATG AGCGTTCCCC ATTCTTATTTGAAAG Pnuc_2066 2134682 - 2135401 + | AAA ATPase TERM 1889 2135607 - 2135624 + T 90 -9.1 -5.00616 | overlap 2135618 GATGAATAAATTTGA GCCCACT TAGA GGTGGGC TTTTTTACGCCAACC Pnuc_2067 2136903 - 2135629 - | phage integrase family protein TERM 1890 2136916 - 2136935 + r 83 -6.5 -5.08255 | opp_overlap 2136918 CACTTTGTGGGCAGA TAGCTGT TGTCAT ACAGCTA TTTTATTTTCAGACT Pnuc_2068 2137289 - 2137005 - | hypothetical protein Pnuc_2069 2137708 - 2137349 - | hypothetical protein TERM 1891 2137822 - 2137809 - R 91 -8.1 -5.24989 | opp_overlap 2137809 TTACAGAGCAAAAAA CCACC CGAA GGTGG TTTGTTTTATAAAAG TERM 1892 2137809 - 2137822 + r 84 -8.1 -4.77173 | opp_overlap 2137809 TTACAGAGCAAAAAA CCACC CGAA GGTGG TTTGTTTTATAAAAG Pnuc_2070 2138224 - 2137871 - | hypothetical protein Pnuc_2071 2138360 - 2138869 + | hypothetical protein TERM 1893 2139033 - 2139046 + T 82 -8.1 -4.55446 | opp_overlap 2139033, overlap 2139028 ATGGGCAATAAAAAA CCACC CGAA GGTGG TTTTGGTATTTCTTG TERM 1894 2139046 - 2139033 - T 93 -8.1 -5.45652 | opp_overlap 2139033 2139028 ATGGGCAATAAAAAA CCACC CGAA GGTGG TTTTGGTATTTCTTG Pnuc_2072 2139819 - 2139124 - | hypothetical protein TERM 1895 2139895 - 2139877 - R 93 -8.9 -5.19275 | opp_overlap 2139872 2139877 AGCCATAAAAGAAAA TAGCCCA ACAAG TGGGCTA TTGTGCTTCTTGGTG TERM 1896 2139877 - 2139895 + r 76 -8.9 -3.6216 | opp_overlap 2139877, overlap 2139872 AGCCATAAAAGAAAA TAGCCCA ACAAG TGGGCTA TTGTGCTTCTTGGTG TERM 1897 2140030 - 2140051 + r 74 -6.5 -4.40199 | GCTTGAAAAATGTTC CCACCAGGG GTAA CTCTGTTGG TTTGTTGGTATTTTT Pnuc_2073 2142313 - 2140109 - | hypothetical protein Pnuc_2074 2143053 - 2142370 - | two component Fis family transcriptional regulator Pnuc_2075 2145368 - 2143056 - | integral membrane sensor signal transduction histidine kinase Pnuc_2076 2145946 - 2145365 - | putative periplasmic ligand-binding sensor protein Pnuc_2077 2147259 - 2145943 - | sun protein TERM 1898 2146670 - 2146692 + g 80 -6.4 -4.8622 | TCAGTTAATAAAGCC CGATATTCAT CTC GTGAATATTG TTTTTGGTTCACGCG Pnuc_2078 2148283 - 2147285 - | methionyl-tRNA formyltransferase TERM 1899 2148070 - 2148116 + g 81 -3.9 -5.40072 | opp_overlap 2148111, overlap 2148072 2148072 2148074 GTTGCTGTTTCTCTG GATCCTTGTTATTAC-GCCTGAG AGT CTCAGGCTGTAA-GACAGGAATA TTTTTTTCCAGCGCA TERM 1900 2148072 - 2148114 + g 72 -6.5 -4.34482 | opp_overlap 2148111, overlap 2148072 2148070 2148074 TGCTGTTTCTCTGGA TCCTTGTTATTAC-GCCTGAG AGT CTCAGGCTGTAA-GACAGGAA TATTTTTTTCCAGCG Pnuc_2079 2148808 - 2148293 - | peptide deformylase Pnuc_2080 2148880 - 2149569 + | DNA protecting protein DprA TERM 1901 2151052 - 2151035 - gT 75 -7.7 -4.06384 | TCCCAACACTAGAAA CGCCCAA GACT TTGAGCG AGCCAGAAGCAAAAC TERM 1902 2151912 - 2151902 - gT 74 -6.8 -4.2558 | opp_overlap 2151902 2151891 GATTTCGCAGCAAAA TGGG TCG CCCA TTTGCAGCCATTATT Pnuc_2082 2153507 - 2152272 - | FAD dependent oxidoreductase Pnuc_2081 2149816 - 2152446 + | DNA topoisomerase III TERM 1903 2153468 - 2153498 + gT 75 -10.5 -3.16608 | gap 1, opp_overlap 2153463 2153462, overlap 2153462 CACCACAAATGCCTG CCCCAATCACCACG ATGT CATGGTG-TTGGGG TTGGGTCATTTAAAT Pnuc_2083 2155412 - 2153547 - | phosphoenolpyruvate carboxykinase Pnuc_2084 2156876 - 2155503 - | tRNA modification GTPase TrmE TERM 1904 2156844 - 2156883 + g 100 -14.5 -5.47159 | ACCCGGGGCGGTGGC TACGGCAATGATGGGCA CCTTTC TGGTCATCATTGCCGTA TTTTTTCTGTTAAGC Pnuc_2085 2158589 - 2156916 - | 60 kDa inner membrane insertion protein TERM 1905 2157270 - 2157289 + g 81 -3.5 -5.27477 | opp_overlap 2157271, overlap 2157271 AATCACTACTGGCAA ACAACCC CCTAGT GGGTTGA TTTTTTCCTTGCGAT Pnuc_2086 2158838 - 2158605 - | hypothetical protein Pnuc_2087 2159157 - 2158840 - | ribonuclease P protein component TERM 1906 2158866 - 2158881 + g 75 -2.6 -5.14965 | CTTGTATTTGAGAGC GAAGAA GTTC TTTTTC TTTTTTCCTGAGCCT TERM 1907 2159120 - 2159095 - G 71 -7.5 -3.83921 | opp_overlap 2159092 GCCAACAGAATACAA GCCCCAGTACA AACT TGTCTTGGGGC GAGTTTTAAGTAATT rpmH 2159300 - 2159166 - | 50S ribosomal protein L34