TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.544604 %AT, 4374116 nt, 31732 terms. Intergenic: 0.603492 %AT, H2T: 460724 nt, 3990 terms; T2T: 138682 nt, 3018 terms; H2H: 218584 nt, 3211 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|109896332|ref|NC_008228.1| Pseudoalteromonas atlantica T6c, complete genome (length 5187005) TERM 1 1331 - 1351 + G 74 -8.2 -3.86194 | TAGAAGTGTGGCTCG GCCAAGGC AAATG GCCATGGC TTTGTCGAAAGAGTT Patl_0001 96 - 1520 + | chromosomal replication initiator protein DnaA Patl_0002 1541 - 2644 + | DNA polymerase III, beta subunit Patl_0003 2667 - 3758 + | DNA replication and repair protein RecF TERM 2 4485 - 4466 - g 82 -7.2 -4.84492 | opp_overlap 4466, overlap 4458 TGAATCAGAACAAAA CACCTGTT CACC AACAAGTG TTCCATTTTAATAGC TERM 3 5566 - 5554 - g 78 -6.2 -4.55625 | opp_overlap 5554 ATGAAGATGATAAAA CGCG TTAGT CGCG TTATGCCTGAGGTGA Patl_0004 3763 - 6183 + | DNA gyrase, B subunit TERM 4 6238 - 6219 - f 70 -3.4 -4.90455 | opp_overlap 6220, overlap 6220 ATACATCGATAAAAA GCCCGCTA CCAC TTGCGGGT TTTTTTATGCTCGAA TERM 5 6220 - 6237 + F 100 -6.9 -5.67063 | opp_overlap 6220 6219 TACATCGATAAAAAG CCCGCTA CCAC TTGCGGG TTTTTTTATGCTCGA Patl_0005 6298 - 6996 + | aspartate racemase Patl_0006 8718 - 7111 - | diguanylate cyclase TERM 6 8284 - 8295 + g 73 -2.2 -5.09762 | TAGCAATAGTAAAGC GTCA TTGG TGGC TTTTTGTCTTGCAAT Patl_0007 9232 - 8792 - | hypothetical protein TERM 7 9037 - 9067 + g 91 -7.7 -5.14477 | gap 1, opp_overlap 9042, overlap 9041 9042 CATCAGCTATAAGCT CAATAGTGGTAGCA TAAG TGCTACCACC-TTG TTTTTTAAGTATATA TERM 8 9041 - 9064 + g 93 -9.6 -4.65666 | opp_overlap 9042, overlap 9037 9042 AGCTATAAGCTCAAT AGTGGTAGCA TAAG TGCTACCACC TTGTTTTTTAAGTAT TERM 9 9042 - 9063 + g 86 -13.1 -3.37773 | opp_overlap 9042, overlap 9041 9037 GCTATAAGCTCAATA GTGGTAGCA TAAG TGCTACCAC CTTGTTTTTTAAGTA TERM 10 9063 - 9042 - G 82 -13.1 -3.11291 | opp_overlap 9042 9041 9037 GCTATAAGCTCAATA GTGGTAGCA TAAG TGCTACCAC CTTGTTTTTTAAGTA Patl_0008 11347 - 9269 - | glycine--tRNA ligase TERM 11 9652 - 9642 - G 71 -6.8 -4.13014 | opp_overlap 9642 GCTAGACTCTTAAAA GCAG ATA CTGC TTCTATCCGTGCCGC glyQ 12256 - 11351 - | glycyl-tRNA synthetase subunit alpha Patl_0010 12372 - 12944 + | DNA-3-methyladenine glycosylase I TERM 12 12989 - 12953 - T 82 -3.8 -5.38839 | opp_overlap 12955 12960, overlap 12954 12955 GAGATAAAAAGAAAA CGGTTAAGAGTGTTTA AGGTG TAAACGCTCTTAACTT GGCTACGTCTTCCAA TERM 13 12988 - 12954 - T 71 -7.3 -3.80863 | opp_overlap 12955 12960, overlap 12953 12955 AGATAAAAAGAAAAC GGTTAAGAGTGTTTA AGGTG TAAACGCTCTTAACT TGGCTACGTCTTCCA TERM 14 12955 - 12987 + T 91 -13 -3.09987 | opp_overlap 12954 12953 12955, overlap 12960 GATAAAAAGAAAACG GTTAAGAGTGTTTA AGGTG TAAACGCTCTTAAC TTGGCTACGTCTTCC TERM 15 12987 - 12955 - T 77 -10.8 -2.86078 | opp_overlap 12955 12960, overlap 12954 12953 GATAAAAAGAAAACG GTTAAGAGTGTTTA AGGTG TAAACGCTCTTAAC TTGGCTACGTCTTCC Patl_0011 13415 - 12966 - | hypothetical protein Patl_0012 13951 - 13424 - | hypothetical protein TERM 16 14067 - 14045 - R 100 -17.8 -5.24796 | opp_overlap 14045 TTTAGATAAGAAAAA GGGCGATAGC ATA GCTATCGCCC TTCGTATCATAGATG TERM 17 14045 - 14067 + r 100 -17.8 -3.29947 | opp_overlap 14045 TTTAGATAAGAAAAA GGGCGATAGC ATA GCTATCGCCC TTCGTATCATAGATG TERM 18 14403 - 14418 + r 90 -10.4 -4.43879 | opp_overlap 14403 TTCAATACAAAAAAA CGACCC AGAA GGGTCG TTTTGATTACCTAAT TERM 19 14418 - 14403 - R 100 -10.4 -5.80817 | opp_overlap 14403 TTCAATACAAAAAAA CGACCC AGAA GGGTCG TTTTGATTACCTAAT Patl_0013 15118 - 14429 - | cytochrome c, class I TERM 20 15738 - 15757 + G 91 -8.6 -4.93898 | GCACAGCTGCTGATG GCGAGAGA AGCC TCTCTTGC TTTTTGTGGTGATGT Patl_0014 15261 - 15881 + | GTP-binding protein, HSR1-related TERM 21 15913 - 15896 - T 100 -9.9 -6.21477 | opp_overlap 15896 AAGACCAAAAAAAAA CCTTGTC AATT GACAAGG TTTTTCACATCTAGA TERM 22 15896 - 15913 + T 91 -9.9 -4.64766 | opp_overlap 15896 AAGACCAAAAAAAAA CCTTGTC AATT GACAAGG TTTTTCACATCTAGA TERM 23 16095 - 16077 - T 100 -14.6 -5.60993 | GCGCCCATAAAAAAA CCCCAGCA AGT TGCTGGGG TCGAAGCAAAGGTCT TERM 24 16168 - 16204 + T 100 -11.1 -5.59879 | opp_overlap 16166 16165, overlap 16171 16172 AGTTCATTAAAATGC CAACCGCTTTATGTAAT TAA ATTACATAAAGCGCTTA TTTTTTGTGTTTCTG TERM 25 16171 - 16201 + T 100 -12.8 -4.8277 | opp_overlap 16166 16165, overlap 16168 16172 TCATTAAAATGCCAA CCGCTTTATGTAAT TAA ATTACATAAAGCGC TTATTTTTTGTGTTT TERM 26 16172 - 16200 + T 100 -16.3 -3.46002 | opp_overlap 16166 16165, overlap 16171 16168 CATTAAAATGCCAAC CGCTTTATGTAAT TAA ATTACATAAAGCG CTTATTTTTTGTGTT Patl_0015 19015 - 16229 - | DNA polymerase I TERM 27 17203 - 17214 + g 80 -7.2 -4.63218 | CAGAAGTAGAGGGGG CGCC TTTA GGCG TTTTCTTCAACACCG TERM 28 19786 - 19799 + H 73 -8.1 -3.83437 | overlap 19784 CTGGTATTTTTTAAG CGCAC TGGC GTGCG TATTTTAGTTGGTAA TERM 29 19923 - 19938 + G 73 -4.6 -4.90917 | opp_overlap 19923 ATTGTACTTTAAAGA CGGCAG TGGA CTTCCG TTTTTCCTTGCCTTT Patl_0016 19825 - 21276 + | TrkH family potassium uptake protein TERM 30 21466 - 21442 - T 100 -10 -5.64274 | opp_overlap 21440 CCATGCATAAAAAAA GCTACTCGCC GTTAA GTCGAGTAGC CGTTGAATGCTAAAA TERM 31 21476 - 21508 + T 71 -4.8 -4.54727 | opp_overlap 21483 21484, overlap 21483 21484 AGTAGCCGTTGAATG CTAAAAAGGGCAGC TTCAC GCTGCCATATTTCG TTTTAATTTAGAAGA TERM 32 21501 - 21483 - T 75 -5.9 -4.66833 | opp_overlap 21483 21476 21484, overlap 21484 GTTGAATGCTAAAAA GGGCAGC TTCAC GCTGCCA TATTTCGTTTTAATT TERM 33 21484 - 21500 + T 71 -9.4 -2.81579 | opp_overlap 21483 21484, overlap 21483 21476 TTGAATGCTAAAAAG GGCAGC TTCAC GCTGCC ATATTTCGTTTTAAT TERM 34 21500 - 21484 - T 75 -9.4 -3.39618 | opp_overlap 21484 21483 21476, overlap 21483 TTGAATGCTAAAAAG GGCAGC TTCAC GCTGCC ATATTTCGTTTTAAT Patl_0017 22262 - 21516 - | TraT complement resistance Patl_0018 22662 - 22303 - | hypothetical protein TERM 35 22744 - 22773 + r 71 -3.7 -4.92239 | gap 1, opp_overlap 22744 22753, overlap 22745 22753 AACCTTAACGCTAAA CTCACGT-AATGCA AAG TGCATTTATGTGAA TTTTTAGCTTTTTCG TERM 36 22844 - 22868 + r 75 -10.1 -2.98784 | opp_overlap 22850, overlap 22850 AAGCTATCTGAAATG AAAAAAGCCAC GAA GTGGCTTTTTA ATTATTCATTTTGTC TERM 37 22862 - 22850 - R 95 -9.1 -5.37593 | opp_overlap 22844 22850 TCTGAAATGAAAAAA GCCAC GAA GTGGC TTTTTAATTATTCAT TERM 38 22850 - 22862 + r 90 -9.1 -5.00339 | opp_overlap 22850, overlap 22844 TCTGAAATGAAAAAA GCCAC GAA GTGGC TTTTTAATTATTCAT Patl_0019 23454 - 22918 - | hypothetical protein TERM 39 23429 - 23445 + g 76 -2.3 -5.33848 | overlap 23430 CTGAGTGCTGCGACT GTAAGTA CGA TACTTAG TTTTTTCATTATCAT trkA 24938 - 23559 - | potassium transporter peripheral membrane component Patl_0021 26299 - 24986 - | sun protein Patl_0022 27243 - 26296 - | methionyl-tRNA formyltransferase TERM 40 27090 - 27105 + g 70 -2.4 -5.08824 | overlap 27092 GAGCAAGCTGCTTCA CCGCGC TAGC GTGCAG TTTTTTCCCTCGACC Patl_0023 27762 - 27253 - | peptide deformylase Patl_0024 28001 - 29080 + | peptidoglycan-binding LysM Patl_0025 29105 - 30244 + | DNA protecting protein DprA Patl_0026 30246 - 30722 + | hypothetical protein TERM 41 30731 - 30757 + F 73 -9.5 -3.14132 | overlap 30734 GCATTAATCACTCTG ACACGGGTTTA GAGCG TAAACCCGTGA TTGCTAAGGCACACC TERM 42 30734 - 30754 + F 71 -9.8 -2.77899 | overlap 30731 TTAATCACTCTGACA CGGGTTTA GAGCG TAAACCCG TGATTGCTAAGGCAC TERM 43 30831 - 30845 + G 82 -11.4 -3.60098 | opp_overlap 30818 AATCCGCGTTTGACC CCGGAC CCT GTCCGG TTTGCAATGCGCCAT Patl_0027 30779 - 31339 + | DNA topoisomerase, type IA, Zn finger TERM 44 31476 - 31488 + G 72 -9.1 -3.60627 | GGTCTTTGCCTATCC GACGG AAG CCGTC TTTGGCCTAGGATGC Patl_0028 31408 - 31971 + | SUA5/yciO/yrdC-like TERM 45 32658 - 32647 - g 73 -4.4 -4.85599 | opp_overlap 32647 CCTATTTTAGAAAAA CGTA AAGA TACG TCTTTTTCAGAGCAG Patl_0029 31975 - 32898 + | coproporphyrinogen III oxidase TERM 46 33046 - 33029 - f 79 -5.7 -4.88388 | ATAACCTGATAAAAA TATTGAT GTAG ATCAATA ATGACTGGCGATTGC Patl_0030 33101 - 33784 + | OmpW TERM 47 33786 - 33823 + F 70 -7.7 -3.77722 | opp_overlap 33791, overlap 33790 33791 GCTACAAGTTTTAAT ACAAATGGAAGCGACGT AAGT GCGTCGCTTCCAGTTAC TTATTACTAATTCAG TERM 48 33790 - 33819 + F 95 -12.9 -3.56544 | opp_overlap 33791, overlap 33786 33791 CAAGTTTTAATACAA ATGGAAGCGACGT AAGT GCGTCGCTTCCAG TTACTTATTACTAAT TERM 49 33791 - 33818 + F 100 -16.4 -2.73203 | opp_overlap 33791, overlap 33790 33786 AAGTTTTAATACAAA TGGAAGCGACGT AAGT GCGTCGCTTCCA GTTACTTATTACTAA TERM 50 33818 - 33791 - f 100 -15.7 -4.20025 | opp_overlap 33791 33790 33786 AAGTTTTAATACAAA TGGAAGCGACG TAAGTG CGTCGCTTCCA GTTACTTATTACTAA Patl_0031 33931 - 34749 + | shikimate 5-dehydrogenase TERM 51 34971 - 34949 - g 83 -9.2 -4.28361 | GCAATGGGATGAAAA TGGCGTTATT CAC ATTAACGCCA AATCGATGGAAGCCT Patl_0032 34746 - 34988 + | hypothetical protein Patl_0033 35568 - 35035 - | carbonic anhydrase/acetyltransferase TERM 52 38011 - 38051 + r 100 -12.1 -5.02074 | opp_overlap 38005 38010 AGTAGAAAAGATTAG CCTTAATCAATGTGTACTG ATT CAGTATTTATTGATTAGGG TTTTTTAAACCCTAC TERM 53 38751 - 38739 - R 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 54 39546 - 39528 - R 79 -10.3 -3.54743 | overlap 39541 CATGAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 55 40049 - 40038 - R 72 -4.4 -4.7254 | overlap 40040 ACTGTTTATTAAAAA CACA GCAC TGTG CTAAATCGAAAGATG TERM 56 41156 - 41181 + r 71 -6.9 -4.0371 | opp_overlap 41156 41159, overlap 41159 TGAGGCTTAACCATA CAACGCCCAAA TGAC TTTGGATGTTG TTTGTATGACAAGTA TERM 57 41480 - 41443 - R 73 -10 -2.79501 | gap 1, opp_overlap 41443 41449, overlap 41449 CAGACTCCCATTACA CGAAAA-GCCCTGAACA AAAAA CGGTCAGGGCTTTTTCG TATATGCGTTTCGCG TERM 58 41449 - 41473 + r 85 -7.1 -4.84527 | opp_overlap 41449 41443, overlap 41443 CCCATTACACGAAAA GCCCTGAAC AAAAAAC GGTCAGGGC TTTTTCGTATATGCG TERM 59 41473 - 41449 - R 80 -7.8 -4.371 | opp_overlap 41443 41449, overlap 41443 CCCATTACACGAAAA GCCCTGAACA AAAAA CGGTCAGGGC TTTTTCGTATATGCG TERM 60 42599 - 42616 + r 83 -9.9 -3.89903 | opp_overlap 42598 42597 42601 TAATACTGCTAAATG CATTGGC ACTA GCCAATG TTTCTAAGGATGTTT TERM 61 44788 - 44774 - R 72 -10 -2.64144 | opp_overlap 44771 44774, overlap 44773 TTGGGATCCAAATAG CCAAGC AAT GCTTGG TCGTTCTAAGATCCC TERM 62 44774 - 44788 + r 73 -10 -2.83822 | opp_overlap 44774 44773, overlap 44771 TTGGGATCCAAATAG CCAAGC AAT GCTTGG TCGTTCTAAGATCCC Patl_0035 46605 - 45151 - | hypothetical protein TERM 63 45246 - 45281 + g 80 -13.4 -2.53995 | opp_overlap 45243 45242 45254, overlap 45254 CAATGAAGTAATCTC GTAGCACAGGTTGTTG GTCC CACCAACCTGTGCTAA TGCGTTCAGGTCCAT Patl_0036 47304 - 46615 - | hypothetical protein TERM 64 47380 - 47390 + H 76 -6.8 -4.39426 | ATTAGCAAGTTTTAG GTGC AGG GCAC TTTTGTCAAACTATG Patl_0037 47478 - 47951 + | hypothetical protein Patl_0038 48841 - 47969 - | hypothetical protein Patl_0039 49564 - 48863 - | hypothetical protein TERM 65 49799 - 49780 - R 77 -6.5 -4.55887 | GTGTAAAAAGAGAAA GGCATAT TTTCAC ATATGCC AACAAACATCACTTA Patl_0040 51577 - 49808 - | hypothetical protein Patl_0041 51948 - 51625 - | hypothetical protein TERM 66 51769 - 51780 + g 73 -4.4 -4.77157 | opp_overlap 51769 GGTGACATCAGCGAA CTCA TCTT TGAG TTTTTCATGGCTTGG TERM 67 52495 - 52513 + G 72 -6.6 -4.36914 | opp_overlap 52495 GCTATGGCCTTAAAC CTGCTGGC GAT GACGGCAG TTTTCTACAACGCGC TERM 68 52594 - 52582 - g 72 -9.1 -3.59979 | opp_overlap 52575 CGTTCGTACTTGAAA CTGCC AAA GGCAG TGTCGAATTAGCTTA TERM 69 52851 - 52830 - g 90 -10.1 -4.40132 | ACCAATGAGAAGAAA CGCCACGCT GCAG AGCACGGCG CCATTGGTTATGTGA TERM 70 52983 - 52999 + G 71 -8 -3.90744 | opp_overlap 52997 GCCAATGTTTATCCT GCACTG AAAAA CAGTGC TTATTTAAGCAAAGA TERM 71 53465 - 53435 - g 86 -8.9 -4.37886 | overlap 53437 53451 53453 TTACTTCGCACAAAA CCCCACCGTGGCA AAAGA CGCCATGGTGGCG AACGTTAATTTAGAC TERM 72 53465 - 53453 - g 72 -9.1 -3.6422 | overlap 53437 53435 53451 CACCGTGGCAAAAGA CGCCA TGG TGGCG AACGTTAATTTAGAC Patl_0042 52248 - 53906 + | peptidase M28 TERM 73 53957 - 53984 + F 100 -11.4 -5.18371 | TTCATCATGGACCAG TGAGTGCAAGCT TACT AACTTGCACTCA TTTTGTTTTGTGCCG Patl_0043 54077 - 55933 + | hypothetical protein TERM 74 55988 - 55963 - T 100 -17.7 -5.19819 | opp_overlap 55963 AAATAAAAGTAAAAA GCCCGTTGAGT TGTG ACTCAACGGGC TTTTTTATGTGCAAA TERM 75 55963 - 55988 + T 100 -17.7 -5.36441 | opp_overlap 55963 AAATAAAAGTAAAAA GCCCGTTGAGT TGTG ACTCAACGGGC TTTTTTATGTGCAAA slmA 56608 - 56015 - | nucleoid occlusion protein TERM 76 56428 - 56410 - G 70 -2.4 -5.09173 | TAATACGCGAAAAAA GAGTCTCT TCA ATAAACTC TATTAAGCCCTCAAA Patl_0045 57924 - 56671 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Patl_0046 58059 - 58733 + | DNA repair protein RadC Patl_0047 58861 - 59673 + | glycosyl transferase family protein TERM 77 59883 - 59895 + G 78 -4.8 -5.02476 | opp_overlap 59883 CACACGCTAAAAACT CGAC TCGTC GTCG TTTTTTGCCAAATCT Patl_0048 59813 - 60049 + | ribosomal protein L28 Patl_0049 60062 - 60217 + | ribosomal protein L33 TERM 78 60236 - 60269 + F 100 -12.5 -4.65153 | opp_overlap 60245, overlap 60238 60245 ATACTTGTTTTGTCT CCCGAAAAACCCGGC TCAT GTCGGGTTTTTTGCG TTTTACTTTCTCTCG TERM 79 60238 - 60267 + F 91 -13.7 -2.6172 | opp_overlap 60245, overlap 60236 60245 ACTTGTTTTGTCTCC CGAAAAACCCGGC TCAT GTCGGGTTTTTTG CGTTTTACTTTCTCT TERM 80 60260 - 60245 - f 77 -6 -4.56597 | opp_overlap 60238 60236 60245 TTGTCTCCCGAAAAA CCCGGC TCAT GTCGGG TTTTTTGCGTTTTAC TERM 81 60245 - 60260 + F 91 -8.2 -5.2696 | opp_overlap 60245, overlap 60238 60236 TTGTCTCCCGAAAAA CCCGGC TCAT GTCGGG TTTTTTGCGTTTTAC Patl_0050 60368 - 60898 + | hypothetical protein Patl_0051 60939 - 61751 + | formamidopyrimidine-DNA glycosylase TERM 82 61825 - 61837 + T 74 -9.1 -3.55563 | ACGTTATTGCTAGCG GGCGT CAC ACGCC TTTACCACCTCCAGT Patl_0052 62912 - 61839 - | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase TERM 83 62958 - 62938 - R 79 -11.2 -2.72344 | opp_overlap 62935 TTGTATTGTTAATGA CGCGCTTA GAGGA TAAGCGCG CGATGGTATATTACT coaD 63499 - 63017 - | phosphopantetheine adenylyltransferase Patl_0054 64951 - 63548 - | hypothetical protein TERM 84 64821 - 64834 + g 70 -2.4 -5.03994 | AGGGGTGCCCCAGGG GTCA GTGCCA TGAC TTTTTCTATCTGAGA Patl_0055 65797 - 65078 - | 3-deoxy-D-manno-octulosonic-acid kinase TERM 85 66691 - 66707 + G 71 -3.6 -4.85267 | TGGTGAACTGCCGTT TGAGCG CATTC CGCCCA TTTTTAGTGCTTTAT Patl_0056 65951 - 67027 + | glycosyl transferase, group 1 Patl_0057 68350 - 67034 - | three-deoxy-D-manno-octulosonic-acid transferase-like TERM 86 67070 - 67091 + g 91 -10.9 -4.3467 | gap 1, overlap 67071 TCCTAACGCCTGCAA C-GTGGCGCT AAC AGCGCCACTG TTTTCCTGTAAAACT TERM 87 67071 - 67089 + g 100 -14.6 -3.77806 | overlap 67070 CCTAACGCCTGCAAC GTGGCGCT AAC AGCGCCAC TGTTTTCCTGTAAAA Patl_0058 68610 - 69029 + | hypothetical protein TERM 88 69883 - 69861 - g 70 -9.8 -3.05463 | AGGGCTGTTACCTAA CGGCGGCATC AAG GATACTGCCG CTGAAGGGATATATG Patl_0059 69031 - 70212 + | hypothetical protein TERM 89 71806 - 71816 + G 72 -8.2 -3.76815 | CTTCAAAAGATGCTG GCGG AGA CCGC TTTACACTTTTCAAT Patl_0060 70215 - 72662 + | diguanylate cyclase/phosphodiesterase Patl_0061 72809 - 74005 + | 2-amino-3-ketobutyrate coenzyme A ligase tdh 74002 - 75024 + | L-threonine 3-dehydrogenase TERM 90 75329 - 75341 + G 71 -3.3 -4.73613 | GCTTCGAAGCATGGC GCCAG AGT CTGCC TTTTGTTAGTGGTGA Patl_0063 75040 - 75360 + | thiosulfate sulfurtransferase Patl_0064 75364 - 76242 + | rhomboid-like protein Patl_0065 76662 - 76249 - | flagellar basal body-associated protein FliL-like protein Patl_0066 76790 - 77368 + | chorismate lyase Patl_0067 77409 - 78230 + | 4-hydroxybenzoate polyprenyl transferase Patl_0068 78268 - 80214 + | methyl-accepting chemotaxis sensory transducer Patl_0069 80471 - 80220 - | hypothetical protein Patl_0070 80654 - 82669 + | ATP-dependent DNA helicase Rep Patl_0071 85264 - 82673 - | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 91 82724 - 82712 - G 70 -9.1 -3.34398 | overlap 82710 TGGGGCTTCTAAATA GGGTC CTT GACCC AATTGACAGCCAACT TERM 92 83104 - 83092 - G 72 -9.1 -3.65201 | opp_overlap 83092 TAATATCTTGAATAA GCTGC ACA GCAGC TTCGCTATGGGTTAA TERM 93 85383 - 85334 - R 87 -12.5 -3.38435 | gap 1, opp_overlap 85349, overlap 85336 85349 85382 GCGTTCAAAATAAAC TATTCGTT-ACAAAAAGGCCACCC TTA AGGTGGCCTTTTTATGAACAAATT TTTACAAAAACAACT TERM 94 85381 - 85336 - R 100 -15.1 -3.25598 | gap 1, opp_overlap 85349, overlap 85334 85349 GTTCAAAATAAACTA TTCGTT-ACAAAAAGGCCACCC TTA AGGTGGCCTTTTTATGAACAAA TTTTTACAAAAACAA TERM 95 85367 - 85349 - R 100 -12.4 -4.83615 | opp_overlap 85349, overlap 85336 85334 TATTCGTTACAAAAA GGCCACCC TTA AGGTGGCC TTTTTATGAACAAAT TERM 96 85349 - 85367 + r 100 -11.7 -4.83169 | opp_overlap 85349 85336 85334 TATTCGTTACAAAAA GGCCACC CTTAA GGTGGCC TTTTTATGAACAAAT Patl_0072 85811 - 85401 - | cytochrome c, class I Patl_0073 86748 - 85909 - | DNA ligase TERM 97 86787 - 86773 - R 70 -2.8 -5.06414 | opp_overlap 86773, overlap 86776 GCCTTTCAACAAAAA TTAGCT TAC AGCTTA GTTCATAAGTGTGAG TERM 98 86953 - 86980 + r 100 -17.8 -3.82592 | ACTGTCATCGCGGCG CTCGCTCCGAGC CTTC GCTTGGAGCGAG TTATTGTGGCCTTCT Patl_0074 87830 - 87003 - | alpha/beta hydrolase fold TERM 99 87723 - 87698 - G 72 -8.3 -3.74251 | opp_overlap 87697 87694 GATACTGGGAGGAAA GTTGTGGCATA ACGT TTCGCCACAAC GTCCTGTTCGTCGGT TERM 100 88307 - 88296 - R 100 -3.6 -6.4275 | overlap 88298 CAAAAATAAAAAAAA GCCC CAAC GGAC GACGTTGAACTAATG TERM 101 88508 - 88520 + r 86 -10.5 -4.13728 | opp_overlap 88488 TGGCTTTACCCCAGT CGCGG TAC CCGCG TTTTGAGACTATCTA TERM 102 88569 - 88547 - R 100 -11.3 -5.93252 | opp_overlap 88547 TCTAAAAACAAAAAA GCCCCAACG GACGA CGTTGAGGC TTTTTCGTTTTTAAT TERM 103 88547 - 88569 + r 93 -9.1 -5.1971 | opp_overlap 88547 TCTAAAAACAAAAAA GCCCCAACG GACGA CGTTGAGGC TTTTTCGTTTTTAAT TERM 104 88620 - 88636 + r 70 -9.5 -2.62616 | opp_overlap 88610 88622, overlap 88610 88622 TCGAACCACGGACAC GAGGATT TTC AATCCTC TGCTCTACCAACTGA Patl_0075 89112 - 88840 - | hypothetical protein Patl_0076 90290 - 89226 - | A/G-specific adenine glycosylase TERM 105 89507 - 89528 + g 73 -10.1 -3.46647 | opp_overlap 89505 89506, overlap 89505 AAAATCCCCACAACC CCCCCCACA AGCC TGTGGAGGG TCTTTGATAAATCAA Patl_0077 90367 - 91098 + | alpha/beta hydrolase fold Patl_0078 91179 - 91898 + | tRNA (guanine-N(7)-)-methyltransferase Patl_0079 91898 - 92929 + | rRNA (guanine-N(2)-)-methyltransferase TERM 106 93219 - 93231 + G 72 -4.7 -4.56597 | overlap 93213 GGTGAAGACTGCGCT GAGCC TCA GGCAC TTTTTGCCAGCCGCA TERM 107 93464 - 93481 + G 72 -5.5 -4.4017 | overlap 93467 TTGCAACGATTGGCA TACGGCG CTAA CGCCTTA TTTTATGAGCATTGA TERM 108 93467 - 93478 + G 74 -7.2 -4.31397 | overlap 93464 CAACGATTGGCATAC GGCG CTAA CGCC TTATTTTATGAGCAT glgA 93048 - 94478 + | glycogen synthase TERM 109 96374 - 96385 + G 73 -4.4 -4.78764 | GTATCCCCGAGTATT TACG TAAG CGTA TTTTTGATCCCTTTG Patl_0081 94987 - 96576 + | histidine kinase Patl_0082 96793 - 97500 + | two-component response regulator TERM 110 97551 - 97517 - T 91 -11.7 -3.87576 | gap 1, opp_overlap 97519 97520 97528, overlap 97519 97528 TCACAACAACTCAAA CACAAAAAAAAGCGGC TTAA GCCGC-TTTTTTTATG TCTGTTACATGAGTA TERM 111 97519 - 97551 + T 91 -13 -3.1082 | gap 1, opp_overlap 97517 97519 97528, overlap 97520 97528 ACAACAACTCAAACA CA-AAAAAAAGCGGC TTAA GCCGCTTTTTTTATG TCTGTTACATGAGTA TERM 112 97551 - 97519 - T 95 -13 -3.51556 | gap 1, opp_overlap 97519 97520 97528, overlap 97517 97528 ACAACAACTCAAACA CA-AAAAAAAGCGGC TTAA GCCGCTTTTTTTATG TCTGTTACATGAGTA TERM 113 97520 - 97549 + T 85 -12.3 -3.11072 | opp_overlap 97517 97519 97528, overlap 97519 97528 CAACAACTCAAACAC AAAAAAAAGCGGC TTAA GCCGCTTTTTTTA TGTCTGTTACATGAG TERM 114 97528 - 97541 + T 100 -9.5 -5.77988 | opp_overlap 97517 97519 97528, overlap 97520 97519 CAAACACAAAAAAAA GCGGC TTAA GCCGC TTTTTTTATGTCTGT TERM 115 97541 - 97528 - T 100 -9.5 -6.15717 | opp_overlap 97528 97520 97519, overlap 97517 97519 CAAACACAAAAAAAA GCGGC TTAA GCCGC TTTTTTTATGTCTGT Patl_0083 98053 - 97568 - | FxsA cytoplasmic membrane protein dipZ 98333 - 100111 + | thiol:disulfide interchange protein precursor Patl_0085 100158 - 101012 + | hypothetical protein Patl_0086 101725 - 101096 - | uracil phosphoribosyltransferase Patl_0087 102350 - 101751 - | hypothetical protein Patl_0088 102565 - 103050 + | 3-dehydroquinate dehydratase Patl_0089 103110 - 103556 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 116 103933 - 103903 - g 83 -9.8 -4.14056 | overlap 103897 AGCTGAAACCATAAA TTTGATGGGCGACA AAG TGTCGGCAATCAAA TCGATGAAGGCGGCC Patl_0090 103571 - 104920 + | acetyl-CoA carboxylase, biotin carboxylase TERM 117 104964 - 104949 - T 90 -9 -4.85433 | opp_overlap 104949 AGATAAATCGAAAAA GAGTGC TTAT GCACTC TTTTTTTTTGAGCTG TERM 118 104949 - 104964 + T 100 -9 -6.09133 | opp_overlap 104949 AGATAAATCGAAAAA GAGTGC TTAT GCACTC TTTTTTTTTGAGCTG Patl_0091 106351 - 104987 - | MATE efflux family protein TERM 119 105510 - 105500 - G 70 -2.4 -5.06451 | TATCACCGCAAAAAA CTCG ATT CGTG TTGCCACGCCGAATG TERM 120 106428 - 106409 - H 71 -6.4 -4.20084 | opp_overlap 106412 106415 ATTATCTATGCAAAA GTTCAACG TGAT CGGTGAAC ACGTTAGTTTACGCT prmA 106492 - 107370 + | ribosomal protein L11 methyltransferase Patl_0093 107906 - 107394 - | HxlR family transcriptional regulator TERM 121 108244 - 108254 + H 76 -4.6 -5.09895 | CGCAGTGTTGTGACT GTGC TGG GCGC TTTTTTACCTCAATA Patl_0094 108325 - 108507 + | hypothetical protein TERM 122 108516 - 108555 + F 100 -10.9 -5.60993 | opp_overlap 108504 108517, overlap 108517 108522 CAAGTAGCAAAAGCA ACTGGACCACAGGTTAA ATGTGC TTAACCTGTGGTTTAGG TTTTTTTATGCGCAA TERM 123 108517 - 108554 + F 100 -14.4 -3.95873 | opp_overlap 108517, overlap 108516 108522 AAGTAGCAAAAGCAA CTGGACCACAGGTTAA ATGTGC TTAACCTGTGGTTTAG GTTTTTTTATGCGCA TERM 124 108554 - 108517 - f 83 -10.7 -3.73345 | opp_overlap 108517 108516 108522 AAGTAGCAAAAGCAA CTGGACCACAGGTTAAA TGTG CTTAACCTGTGGTTTAG GTTTTTTTATGCGCA TERM 125 108522 - 108549 + F 100 -12.9 -4.12151 | opp_overlap 108517, overlap 108517 108516 GCAAAAGCAACTGGA CCACAGGTTAA ATGTGC TTAACCTGTGG TTTAGGTTTTTTTAT Patl_0095 108792 - 109910 + | inosine/uridine-preferring nucleoside hydrolase Patl_0096 111032 - 110016 - | hypothetical protein Patl_0097 111287 - 111033 - | hypothetical protein Patl_0098 112109 - 111594 - | sodium/calcium exchanger membrane region Patl_0099 112604 - 114013 + | hypothetical protein Patl_0100 114525 - 114100 - | MarR family transcriptional regulator Patl_0101 114655 - 115083 + | OsmC-like protein TERM 126 115128 - 115103 - f 89 -12 -3.73647 | opp_overlap 115112, overlap 115106 GCCACGCAGCAATAA TAAGCCAGCT TTTTTT AGCTGGCTTA AAAAATATTCGCTAT TERM 127 115125 - 115106 - f 83 -9.3 -3.99775 | opp_overlap 115112, overlap 115103 ACGCAGCAATAATAA GCCAGCT TTTTTT AGCTGGC TTAAAAAATATTCGC Patl_0102 115463 - 116398 + | ATPase TERM 128 117299 - 117309 + G 84 -8.2 -4.61648 | overlap 117280 AGTGGTTCAGTGAGT CGCG TGG CGCG TTTCTTGTTATTGTT Patl_0103 116399 - 117769 + | VWA containing CoxE-like Patl_0104 118760 - 117774 - | AraC family transcriptional regulator TERM 129 119218 - 119237 + G 71 -7 -4.13945 | overlap 119215 GAGCGTTCACTTGCA GGCGCCCC TGAT GTGGTGCC TTTTGGCCTAAAAAT Patl_0105 118957 - 120147 + | acyl-CoA dehydrogenase-like TERM 130 120213 - 120179 - g 73 -4.3 -4.90079 | gap 2, opp_overlap 120192 120193, overlap 120181 ATCTGAAGAACAAAA CATGCTCAAAGACAGCG TTG CGC-G-CTTTGTGCAAG ACGAATACGACTTTG TERM 131 120628 - 120613 - g 72 -3.2 -5.02074 | opp_overlap 120602 TTAGCGGTGAAAAAA CCGTTG TGTT CAATGG TGCAGCCGCCAACAA Patl_0106 120150 - 121289 + | acyl-CoA dehydrogenase-like TERM 132 121314 - 121338 + T 86 -9.3 -4.44667 | opp_overlap 121317, overlap 121317 TTTAGAGTCGATATT AAAGCCAGCTG ACA TAGCTGGCTTC TTTGTTGTTACCGCA TERM 133 121317 - 121335 + T 91 -11 -4.33582 | opp_overlap 121317, overlap 121314 AGAGTCGATATTAAA GCCAGCTG ACA TAGCTGGC TTCTTTGTTGTTACC TERM 134 121335 - 121317 - T 84 -10.3 -3.84266 | opp_overlap 121317 121314 AGAGTCGATATTAAA GCCAGCT GACAT AGCTGGC TTCTTTGTTGTTACC TERM 135 121621 - 121599 - T 77 -10 -3.314 | opp_overlap 121604, overlap 121604 AAGAAGTAACCAAGA CAAAATGGTC GGG AACCATTTTG AACATCCGAAGGATG TERM 136 121746 - 121732 - T 73 -7.1 -4.09243 | opp_overlap 121725 121738 CACAGGTCGTGAAAA CGCGT TCCCG ACGCG GCTTTCACTTGAATT TERM 137 122178 - 122195 + T 71 -9.9 -2.75712 | opp_overlap 122170, overlap 122175 TAACGGAGTTATAGC TTCGCCA TCCA TGGCGAA TCGTTCACTCGATAG Patl_0107 123513 - 123037 - | transcription elongation factor GreB TERM 138 123463 - 123474 + g 76 -2.2 -5.27923 | CCACAGTTCATCATG CTCG TCGT TGAG TTTTTTGTAGCCTTC TERM 139 123841 - 123829 - R 73 -7.7 -3.90744 | TTCTGGGCCAAATAA CCCTT TCG AAGGG TAGAAAACCGAGGGA TERM 140 123899 - 123919 + r 100 -14.1 -5.77988 | opp_overlap 123899 TGAGTAAAGAAAAAA CCGAACATC AAT GATGTTCGG TTTTTTTATGTCTGT TERM 141 123919 - 123899 - R 100 -14.1 -5.68438 | opp_overlap 123899 TGAGTAAAGAAAAAA CCGAACATC AAT GATGTTCGG TTTTTTTATGTCTGT Patl_0108 124719 - 123970 - | peptidylprolyl isomerase TERM 142 124698 - 124709 + g 88 -3.6 -5.73563 | CTGAGGTAATTAGAA TCGC GATA GCGG TTTTTTTCATTTACT TERM 143 124800 - 124784 - H 71 -7.3 -3.92522 | TTTCAACTTGATAAA GCGCTTA TAC TAAACGC CCTGAGTGAAAAGAG TERM 144 125052 - 125036 - g 76 -2.2 -5.34208 | overlap 125037 AAAAAAAATGAAAAA CGCTAC ACTTG GCAGCA CCAAGGCGAGGGAAA Patl_0109 124838 - 125812 + | WD-40 repeat-containing protein Patl_0110 125825 - 126037 + | SlyX Patl_0111 126283 - 126077 - | hypothetical protein Patl_0112 126363 - 128315 + | ABC transporter related Patl_0113 128355 - 128924 + | GCN5-related N-acetyltransferase Patl_0114 129813 - 128929 - | LysR family transcriptional regulator Patl_0115 129932 - 131038 + | hypothetical protein TERM 145 131135 - 131099 - T 100 -17.6 -3.6502 | GACGTTTTACCCAAA GAGTCAGCATTTTATG TCATC CATAAAACGCTGACTC ACAATCCAATTACTG Patl_0116 133427 - 131145 - | putative alpha-1,2-mannosidase TERM 146 131418 - 131394 - G 70 -9.3 -3.37959 | opp_overlap 131394, overlap 131397 TAAGCTGAAGACTAA CCATGCTGACA TAG TGCCAGCATCG TCATTGCCGGGCAGC Patl_0117 135652 - 133424 - | putative alpha-1,2-mannosidase TERM 147 134649 - 134639 - G 71 -6.8 -4.08767 | GTTACTGTCGGAAAA CACC CGA GGTG CTAACGCAGTGTGAT TERM 148 134738 - 134754 + g 91 -8.7 -4.99435 | overlap 134739 AAGTTGCTCTCGCCA TGCTTGC TGG GCAAGCG TTTTTACTTGTTCAA TERM 149 134739 - 134753 + g 75 -10 -3.58577 | overlap 134738 AGTTGCTCTCGCCAT GCTTGC TGG GCAAGC GTTTTTACTTGTTCA TERM 150 135237 - 135218 - G 74 -5.7 -4.7078 | GTAATCATCTAAAAA CACCTGA TAATAC CCAGGTG ATGCTTGCTCATTTT Patl_0118 136852 - 135665 - | N-acylglucosamine 2-epimerase TERM 151 136881 - 136906 + r 77 -10.4 -3.32572 | overlap 136881 136882 CTTATTAGGTTTGCA GCCTGTCGCC AGATTA GGCGACAGGG CTTTTCTCATTAAGT TERM 152 136881 - 136907 + r 91 -10.2 -4.55491 | gap 1, overlap 136881 136882 CTTATTAGGTTTGCA G-CCTGTCGCC AGATTA GGCGACAGGGC TTTTCTCATTAAGTG TERM 153 136882 - 136905 + r 91 -13.9 -2.5882 | overlap 136881 136881 TTATTAGGTTTGCAG CCTGTCGCC AGATTA GGCGACAGG GCTTTTCTCATTAAG TERM 154 136946 - 136969 + r 76 -6.6 -4.35524 | overlap 136948 ACTAGCTGGCTACAG GCGCTGGCGT AGGG GCGTCAGCAC TTTTCACTTTAGAGC Patl_0119 138209 - 136932 - | glucose/galactose transporter TERM 155 138249 - 138228 - R 79 -8.7 -4.11216 | opp_overlap 138228 138229, overlap 138229 TTTTTACTCGTAAAA GGTGCCAGT CGAA ACTGGCACG TTAATAAATGGGTGG TERM 156 138229 - 138248 + r 81 -12.2 -2.51133 | opp_overlap 138228 138229, overlap 138228 TTTTACTCGTAAAAG GTGCCAGT CGAA ACTGGCAC GTTAATAAATGGGTG TERM 157 138248 - 138229 - R 82 -12.2 -3.06515 | opp_overlap 138229 138228, overlap 138228 TTTTACTCGTAAAAG GTGCCAGT CGAA ACTGGCAC GTTAATAAATGGGTG Patl_0120 140584 - 138266 - | putative alpha-1,2-mannosidase TERM 158 138466 - 138482 + g 70 -5.1 -4.42386 | TGTTATTGCCTTTGA CGGTAAA GCG TTCACCG TTTTGTAAATGCAAC Patl_0121 140937 - 141944 + | LacI family transcription regulator Patl_0122 142237 - 145131 + | TonB-dependent receptor TERM 159 147349 - 147326 - g 70 -9.6 -3.03124 | overlap 147328 CCGCAGCTGTGAACA CATTGGCTCT AACC AGTGCCAATG ATGCCCCAGAGCGTG Patl_0123 145201 - 148035 + | coagulation factor 5/8 type-like TERM 160 148050 - 148082 + F 93 -14.3 -2.72344 | opp_overlap 148055, overlap 148055 AGCACAGAGCCTAGG TGAAAGCCCGCTATC TCT GATAGTGGGCTTTTG TAGTTCCACATAGAC TERM 161 148055 - 148077 + F 100 -14.2 -4.5442 | opp_overlap 148055, overlap 148050 AGAGCCTAGGTGAAA GCCCGCTATC TCT GATAGTGGGC TTTTGTAGTTCCACA TERM 162 148077 - 148055 - f 89 -12 -3.60805 | opp_overlap 148055 148050 AGAGCCTAGGTGAAA GCCCGCTATC TCT GATAGTGGGC TTTTGTAGTTCCACA TERM 163 148906 - 148891 - g 84 -10.4 -3.85698 | CTCTGCGCTTACAAA GTCGCC TAGA GGCGAC GGTGAATCAAGCCAT Patl_0124 148122 - 148991 + | ATPase, BadF/BadG/BcrA/BcrD type Patl_0125 149032 - 150015 + | twin-arginine translocation pathway signal TERM 164 150043 - 150053 + G 82 -3.2 -5.60993 | TGGGTAGCCTATTGC TGTG CAC CGCA TTTTTTTGTCAGGCA TERM 165 151313 - 151296 - g 74 -3.3 -5.0538 | GGCCAGGGTAAAAAA CTGATCG AAAA CGGCCAG CAAGTGTTAAGTGGC Patl_0126 150012 - 151772 + | glycoside hydrolase family protein Patl_0127 151772 - 152509 + | CutC TERM 166 153124 - 153089 - g 76 -8.4 -4.14739 | gap 1, opp_overlap 153114 CTACCCAGCGGAAAA CGACAAAAGTGAC-GAG AAG CTCAGTGTCTTTTGTCG CAAAGCACCTTGTCA TERM 167 153255 - 153271 + G 78 -6.5 -4.69549 | overlap 153246 GTACAGCAGGCGTTG TCAGCAC AGC GCGCTGA TTTTCATTTTGCATT TERM 168 154190 - 154202 + G 77 -9.1 -3.92869 | opp_overlap 154190 CAGTGAATATAAAAA GCGTG TGC CACGC TTTATGAGTGAATAC TERM 169 154202 - 154190 - g 100 -9.1 -5.10767 | opp_overlap 154190 CAGTGAATATAAAAA GCGTG TGC CACGC TTTATGAGTGAATAC Patl_0128 152568 - 155183 + | glycoside hydrolase family protein Patl_0129 155186 - 156976 + | Na+/solute symporter Patl_0130 157009 - 159252 + | putative alpha-1,2-mannosidase TERM 170 159289 - 159271 - f 89 -11.7 -3.74526 | opp_overlap 159271 TTAGTAATTTAACAA GGTGGCG CTATT CGCCACC TTTTTTTTGACGATT TERM 171 159271 - 159289 + F 100 -11.7 -5.77853 | opp_overlap 159271 TTAGTAATTTAACAA GGTGGCG CTATT CGCCACC TTTTTTTTGACGATT TERM 172 159356 - 159340 - g 80 -12.3 -3.07222 | overlap 159342 AGTATCATGGCAAGA GAGGCTG CAT CAGCCTC TGAACTGTTAGCTAA Patl_0131 159319 - 160314 + | glutamine-fructose-6-phosphate transaminase (isomerizing) TERM 173 160319 - 160356 + F 83 -7.1 -4.6951 | gap 1, opp_overlap 160321 160322, overlap 160321 160322 TAACCGTGTAAAGTA AATCGTGCTTACTGCGGT AAA ACT-CGGTAAGCACGGTC TTTGTTTTAAATACT TERM 174 160321 - 160354 + F 83 -9.7 -3.95475 | gap 1, opp_overlap 160321 160322, overlap 160319 160322 ACCGTGTAAAGTAAA TCGTGCTTACTGCGGT AAA ACT-CGGTAAGCACGG TCTTTGTTTTAAATA TERM 175 160322 - 160353 + F 78 -11 -2.962 | gap 1, opp_overlap 160321 160322, overlap 160321 160319 CCGTGTAAAGTAAAT CGTGCTTACTGCGGT AAA ACT-CGGTAAGCACG GTCTTTGTTTTAAAT Patl_0132 160684 - 161109 + | hypothetical protein TERM 176 161845 - 161860 + G 74 -5.4 -4.68506 | overlap 161847 GCGTGTTCTTAGGTC TTGGCT TAGA AGCCGA TTTTTACGATTGGTT Patl_0133 161124 - 162251 + | hypothetical protein TERM 177 162270 - 162287 + F 100 -9.1 -5.81412 | opp_overlap 162270 ATGAAGAACTAATAA GCGTCTC AATT GAGGCGC TTTTTTTTACGTCAA TERM 178 162544 - 162530 - g 72 -4.9 -4.70879 | GGGAAATTGCAAAAA GCGCA TTCGC CGCGC CTTGGTGGGCGAAAA Patl_0134 162445 - 163506 + | alpha/beta hydrolase fold Patl_0135 163527 - 163763 + | hypothetical protein Patl_0136 164396 - 163800 - | YceI Patl_0137 165229 - 164393 - | 3'(2'),5'-bisphosphate nucleotidase nudE 165792 - 165229 - | ADP-ribose diphosphatase NudE TERM 179 165278 - 165266 - G 73 -7.7 -4.03995 | TGGGCCAGAAAAAGA GCTGT AAT ACAGC GGGCTTCAACGAAAT Patl_0139 165887 - 166570 + | HAD family hydrolase Patl_0140 166737 - 167270 + | inorganic diphosphatase TERM 180 167305 - 167331 + F 71 -9.5 -2.7808 | opp_overlap 167310, overlap 167310 TGACTCTGCACCAAA AAAAAGCCGAC TTTAT GTCGGCTTTTC TAATATTCACTCTTT TERM 181 167326 - 167310 - f 100 -9.4 -5.86061 | opp_overlap 167305 167310 CTGCACCAAAAAAAA GCCGAC TTTAT GTCGGC TTTTCTAATATTCAC TERM 182 167310 - 167326 + F 91 -9.4 -4.55023 | opp_overlap 167310, overlap 167305 CTGCACCAAAAAAAA GCCGAC TTTAT GTCGGC TTTTCTAATATTCAC TERM 183 167441 - 167464 + G 85 -6.1 -5.22039 | gap 1, overlap 167444 AATTCTTTCTATTGG CCA-TGGCAT TTGTT ATGCCACTGG TTTTTTCCGTTTGGA Patl_0141 167383 - 168615 + | major facilitator transporter Patl_0142 168612 - 169073 + | hypothetical protein Patl_0143 169158 - 170777 + | methyl-accepting chemotaxis sensory transducer Patl_0144 171509 - 170802 - | 2OG-Fe(II) oxygenase TERM 184 171073 - 171095 + g 73 -4.2 -4.86773 | TACACCTCTGAATGC CAATAAGG GTAGCCA CCTTGTTG TTTTTCGTACTTTTG TERM 185 171463 - 171436 - G 71 -10.7 -2.70979 | opp_overlap 171436 171433, overlap 171433 171432 171440 CTGGAATCAAATTGA GTAACGAACTG ATCACA CAGTTCGTCAC TGATTGCATGCTCAA Patl_0145 171909 - 171502 - | thioesterase superfamily protein Patl_0146 174754 - 171926 - | excinuclease ABC, A subunit TERM 186 174237 - 174261 + g 72 -6.3 -4.1964 | opp_overlap 174237 174236, overlap 174236 CGAGCGCGTATAAAT CCTTGGGCTGC AAG GCTTTCCAAGG TTTTAACATGTTCGC TERM 187 174586 - 174566 - G 76 -4.8 -4.88736 | gap 1, opp_overlap 174558 CATCATGGATAAAAA TTGTCTTGC GTAG GCA-GACAA GGACTCAACATATCG TERM 188 175430 - 175464 + G 100 -8.6 -5.15526 | opp_overlap 175440 CGCGAGCAGCAGCGG CCAAAAGTGATGGCGA TTA TCGGCATTGCTATTGG TTTTTCATTTTATAT Patl_0147 175046 - 176389 + | major facilitator transporter Patl_0148 176706 - 177308 + | single-strand binding protein TERM 189 177344 - 177361 + F 100 -11.3 -5.38951 | opp_overlap 177344 TGTTAGTTATTTAAA GCCCTGT TCTT ACAGGGC TTTTTTGTATCGGTT TERM 190 177361 - 177344 - f 88 -11.3 -3.6682 | opp_overlap 177344 TGTTAGTTATTTAAA GCCCTGT TCTT ACAGGGC TTTTTTGTATCGGTT TERM 191 177676 - 177688 + F 73 -7.7 -3.94746 | opp_overlap 177668 177676, overlap 177668 CGAAGTATTGGCAAA GCCTA TTG TAGGC TTTAATTCACTCTGG TERM 192 177940 - 177925 - g 75 -3.2 -5.14985 | CGAAACACACAAAAA TTTCGC CTAT GCGCAA TAAGTGCTGCGGTGA Patl_0149 177901 - 180309 + | TonB-dependent receptor TERM 193 180377 - 180336 - f 88 -8.1 -5.14477 | opp_overlap 180339, overlap 180339 180340 180342 TATATACTCAAAAAA TAATCAGCAGCTAAACATC AATC GACGTTTAGCTGCGCATTC TCCTCTCTATTTCCT TERM 194 180374 - 180339 - f 91 -9.8 -4.65666 | opp_overlap 180339, overlap 180336 180340 180342 ATACTCAAAAAATAA TCAGCAGCTAAACATC AATC GACGTTTAGCTGCGCA TTCTCCTCTCTATTT TERM 195 180372 - 180340 - f 86 -12.2 -3.37773 | gap 1, opp_overlap 180339, overlap 180339 180336 180342 TACTCAAAAAATAAT CAGCAGCTAAACATC AATC GACGTTTAGCTGC-G CATTCTCCTCTCTAT TERM 196 180371 - 180342 - f 100 -15.9 -3.23795 | opp_overlap 180339, overlap 180340 180339 180336 CTCAAAAAATAATCA GCAGCTAAACATC AATC GACGTTTAGCTGC GCATTCTCCTCTCTA TERM 197 180487 - 180463 - f 70 -2.7 -5.06505 | AACGAGACAGAAAAA GGCGACCTTGT TGA ACGAGAACACC CGCGTCAACGGCGTT Patl_0150 180520 - 180669 + | zinc finger protein Patl_0151 182199 - 180712 - | deoxyribodipyrimidine photolyase TERM 198 181383 - 181373 - G 80 -6.8 -4.64334 | AATTTCTGAATAAAA TGGC AAT GCCA GTGCAGGCGAGACCG TERM 199 181496 - 181523 + g 71 -3.5 -4.84359 | gap 1, opp_overlap 181503, overlap 181503 181506 CCCCAAGCCAAATAG GGAGAA-AGCCT AGAGC AGGCTGTTCTAC TTTTTATCGGGCTAG Patl_0152 183529 - 182192 - | deoxyribodipyrimidine photolyase TERM 200 182916 - 182929 + g 73 -2.4 -5.10497 | TCACCTCCTGTGAAG GCAA GCCCAA TTGC TTTTTTCGGTGGGTT Patl_0153 185084 - 183672 - | betaine-aldehyde dehydrogenase TERM 201 183834 - 183854 + g 71 -7.5 -3.88559 | GGTTCCACATTCTAA GCGTTTGGC GAC GTCATACGC TTTATCCAAATCATT TERM 202 184064 - 184077 + g 100 -9.5 -5.11836 | overlap 184049 184068 GCACTTCGCCGCCTG CGGCG ATAA CGCCG TTTTCTTTTGCATCT Patl_0154 186795 - 185095 - | AMP-dependent synthetase and ligase TERM 203 185753 - 185771 + g 71 -7.4 -3.95584 | overlap 185754 TGCCCATAGCCGATG AGCACATG TTC CATGTGCA TTTCATTGATCACCC TERM 204 185754 - 185770 + g 75 -10.9 -2.97029 | overlap 185753 GCCCATAGCCGATGA GCACATG TTC CATGTGC ATTTCATTGATCACC TERM 205 185907 - 185890 - G 83 -9.9 -4.0371 | GAGCTCTGATATAAA CATGGTG GGCA CACCATG CAATGCAGTACAGCG TERM 206 186601 - 186627 + g 72 -10.8 -2.88887 | overlap 186606 CTTTCCTATGCCAAG GGCGAGTAGGCC GGT GGCTAACTCGTC TACCTTTTGTTTGAG Patl_0155 189145 - 186821 - | TonB-dependent receptor Patl_0156 189631 - 189179 - | cytochrome c, class I Patl_0157 190203 - 189646 - | twin-arginine translocation pathway signal TERM 207 189956 - 189943 - G 73 -2.3 -5.2015 | overlap 189944 GCAAGAACATAAAAA GCCGT CGAT ACCGC AGTAACGCCAGTATT Patl_0158 190838 - 190218 - | redoxin Patl_0159 191366 - 190845 - | hypothetical protein Patl_0160 192522 - 191371 - | amine dehydrogenase TERM 208 191482 - 191508 + g 71 -8 -3.8901 | overlap 191490 191504 CATCATGTTTGCATT GGTGACAGCTAA AAG TGGGTTGTCACC TTTGGTGATTTCAAG TERM 209 191573 - 191589 + g 74 -10.9 -2.88822 | overlap 191571 ACTTTTTTGTGTTGC TGGGTGT CAT ACACCCA TACTTCTGTGCCGCC Patl_0161 192790 - 193455 + | TetR family transcriptional regulator Patl_0162 193977 - 193549 - | AsnC family transcriptional regulator argD 194129 - 195334 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 210 195513 - 195476 - g 83 -6.3 -5.00616 | opp_overlap 195508 CGCGTGCTCAAAAAA GTTTTACTGAACAGGTG ACTT CCCCTGGCCAACAAAAC TATTTGTTCGTACTC Patl_0164 195340 - 196380 + | arginine N-succinyltransferase TERM 211 196576 - 196562 - g 72 -8.6 -3.6849 | overlap 196570 ACGCAAGGGCAAGAA GTGATC AAC GATCAC ATCGCATTACGTACT Patl_0165 196451 - 197257 + | hypothetical protein TERM 212 197304 - 197288 - f 88 -7.9 -5.09895 | opp_overlap 197288, overlap 197290 TACTTACCTAAAAAA GGGGCCT TAA AGGCCTC TTTTTTTTAGCCGAT TERM 213 197288 - 197304 + F 100 -10.1 -5.75945 | opp_overlap 197288 197290 TACTTACCTAAAAAA GGGGCCT TAA AGGCCTC TTTTTTTTAGCCGAT Patl_0166 197510 - 198442 + | hypothetical protein Patl_0167 198439 - 199050 + | hypothetical protein Patl_0168 199047 - 199739 + | MSHA biogenesis protein MshJ Patl_0169 199741 - 200091 + | hypothetical protein Patl_0170 200081 - 201733 + | pilus (MSHA type) biogenesis protein MshL Patl_0171 201738 - 202646 + | MSHA biogenesis protein MshM Patl_0172 202643 - 203764 + | hypothetical protein TERM 214 204479 - 204438 - g 72 -5.4 -4.46615 | opp_overlap 204442 204445, overlap 204441 204443 CATCATCAAGGAAAA GAACAT-AGCCTCAGCCTTA GTAT TAAGGTTGAAGCTAATG-TC TGGGCTCGATATTTC TERM 215 204477 - 204441 - g 79 -8.2 -4.34008 | gap 1, opp_overlap 204442 204445, overlap 204438 204443 CATCAAGGAAAAGAA CAT-AGCCTCAGCCTTA GTAT TAAGGTTGAAGCTAATG TCTGGGCTCGATATT TERM 216 204474 - 204443 - g 86 -11 -3.75762 | opp_overlap 204442 204445, overlap 204441 204438 TCAAGGAAAAGAACA TAGCCTCAGCCTTA GTAT TAAGGTTGAAGCTA ATGTCTGGGCTCGAT Patl_0173 203761 - 205674 + | type II secretion system protein E TERM 217 206631 - 206615 - g 71 -3.7 -4.81752 | overlap 206616 AAAAACATCGAAAAA GGTGAAA GCC TTTCACG GGTAGCAAGCTCAAG Patl_0174 205667 - 206884 + | type II secretion system protein Patl_0175 206888 - 207400 + | hypothetical protein Patl_0176 207418 - 208056 + | prepilin-type cleavage/methylation Patl_0177 208160 - 208720 + | prepilin-type cleavage/methylation Patl_0178 208803 - 209369 + | prepilin-type cleavage/methylation Patl_0179 209359 - 209928 + | prepilin-type cleavage/methylation-like TERM 218 210039 - 210051 + G 71 -3.4 -4.79223 | ACCAGCTTTATTCGC TCTG GTGTG CAGA TTTTTAATGATGTGA TERM 219 210525 - 210509 - g 75 -9.5 -3.60502 | ATACATAGTGCGAAA TGCAGTA AGT TACTGCA TACGCGGAGGGAGCA Patl_0180 209928 - 210770 + | prepilin-type cleavage/methylation Patl_0181 210760 - 211200 + | type II secretory pathway component TERM 220 211410 - 211426 + G 70 -10.1 -3.0634 | GAGTTTACTATTCGT GCTCCTC AGG GAGGGGC TATTACGCTCAGCTT TERM 221 212267 - 212288 + G 75 -9.5 -3.59627 | gap 1, opp_overlap 212267 212264 AGCGTCAGGATATGA TGCATCACCC TTG GGG-GATGCA TTTCCAACATTTCCT TERM 222 212648 - 212670 + G 71 -3.5 -4.82901 | opp_overlap 212663 TGCAGTGACTTATGA TTACAGC AAAGATAGC GCTGTAA TTTTTATCAACGGCC Patl_0182 211200 - 215813 + | CUB domain-containing protein Patl_0183 216079 - 217122 + | cell shape determining protein MreB TERM 223 217159 - 217146 - f 93 -9.5 -4.85177 | opp_overlap 217146 AAAGGATACTAAAAA GCGGC ATTA GCCGC TTTTACATTTCATAT TERM 224 217146 - 217159 + F 90 -9.5 -4.38313 | opp_overlap 217146 AAAGGATACTAAAAA GCGGC ATTA GCCGC TTTTACATTTCATAT Patl_0184 217173 - 218033 + | rod shape-determining protein MreC Patl_0185 218030 - 218506 + | rod shape-determining protein MreD Patl_0186 218526 - 219104 + | maf protein TERM 225 219720 - 219704 - g 76 -2.3 -5.3104 | overlap 219705 219706 GGATGAAAAAGAAAA CCCATAT ATT ATATGAA GATTTGCCCCTAGCA Patl_0187 219094 - 220557 + | ribonuclease G TERM 226 220626 - 220645 + G 71 -10 -3.281 | overlap 220624 GCTATTTTGTTGGTG CTGGTGGC CGTG GCCATCAG TGTTGTGCGTTACAC TERM 227 221256 - 221235 - g 72 -10.3 -2.78725 | overlap 221232 221237 AGAGCGCACGAAGTA GATTTATCC CCTT GGATAAATC AATGGCTGGCGACCC Patl_0188 220554 - 224459 + | hypothetical protein Patl_0189 224452 - 225282 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 228 225869 - 225851 - g 93 -8.8 -4.74103 | overlap 225853 GTGTTAATGGAAAAA GACGCTCG TCG CGAGCGTG GTAGCTCAGGCGCGG TERM 229 225867 - 225853 - g 87 -11.4 -3.98859 | overlap 225851 GTTAATGGAAAAAGA CGCTCG TCG CGAGCG TGGTAGCTCAGGCGC Patl_0190 225275 - 226717 + | peptidase U62, modulator of DNA gyrase TERM 230 226797 - 226764 - T 86 -12 -3.34344 | gap 1, opp_overlap 226765 226771, overlap 226771 CGACTTTCCAAGCAA TA-AAAAATGGCGCG CATAT CGCGCCATTTTTGTA TCTGTAGACTGTTAC TERM 231 226765 - 226795 + T 84 -12.7 -3.00766 | opp_overlap 226764 226771, overlap 226771 GACTTTCCAAGCAAT AAAAAATGGCGCG CATAT CGCGCCATTTTTG TATCTGTAGACTGTT TERM 232 226771 - 226789 + T 100 -11.7 -5.07275 | opp_overlap 226764 226771, overlap 226765 CCAAGCAATAAAAAA TGGCGCG CATAT CGCGCCA TTTTTGTATCTGTAG TERM 233 226789 - 226771 - T 100 -11.7 -5.5604 | opp_overlap 226771 226765, overlap 226764 CCAAGCAATAAAAAA TGGCGCG CATAT CGCGCCA TTTTTGTATCTGTAG Patl_0191 229252 - 226817 - | Ig-like, group 1 TERM 234 228236 - 228221 - G 79 -10.4 -3.53012 | opp_overlap 228223 228224 GCTTTGGTCTTCAAA CGTGGC GTTA GCCACG CCGTTTATCGTGTTA Patl_0192 229785 - 229258 - | hypothetical protein TERM 235 229302 - 229314 + g 90 -10.5 -4.33248 | overlap 229311 TAAATAACTCGCGAG CCGCC TTG GGCGG TTTATTATCCGCTTG TERM 236 230306 - 230296 - g 72 -8.2 -3.80114 | opp_overlap 230296 GAGCAAGTCATTAAA GCGG AAA CCGC TGCATTAGCATTCGA TERM 237 231044 - 231032 - g 72 -10.5 -2.78816 | opp_overlap 231028 TCACGGGCGATTATA GCCGC GGT GCGGC GGGATTCTGGGTCGA Patl_0193 229894 - 231219 + | peptidase U62, modulator of DNA gyrase TERM 238 231252 - 231297 + T 100 -16.5 -2.55015 | opp_overlap 231262, overlap 231258 231262 ATGAATAGCGGATAT TAAAAATAAAGGGCAATCACA GCAA TGTGGTTGCCCTTTGTTTTAA TCAATTAAGTGAACT TERM 239 231258 - 231291 + T 100 -15.5 -4.30978 | opp_overlap 231262, overlap 231252 231262 AGCGGATATTAAAAA TAAAGGGCAATCACA GCAA TGTGGTTGCCCTTTG TTTTAATCAATTAAG TERM 240 231287 - 231262 - T 100 -11.9 -4.94262 | opp_overlap 231258 231252 231262 GATATTAAAAATAAA GGGCAATCACA GCAA TGTGGTTGCCC TTTGTTTTAATCAAT TERM 241 231262 - 231287 + T 100 -14.1 -4.7261 | opp_overlap 231262, overlap 231258 231252 GATATTAAAAATAAA GGGCAATCACA GCAA TGTGGTTGCCC TTTGTTTTAATCAAT Patl_0194 233210 - 231294 - | peptidase S9, prolyl oligopeptidase active site region TERM 242 233280 - 233255 - R 90 -11.3 -4.06678 | opp_overlap 233255 233257 ATTGATGTACACAAA TATTGAAGGGA CGGT TCCCCTCAATA TTGAATCACGCGGTT Patl_0195 234409 - 233297 - | hypothetical protein TERM 243 234118 - 234093 - G 70 -4.7 -4.37658 | gap 1, overlap 234095 AAGCGTTTGATAAAA GGCGC-ATCGCT GCC AGCAATTGCGGC GGTCGGGTAACGAAA Patl_0196 234578 - 235192 + | glutathione S-transferase-like Patl_0197 235679 - 235224 - | hypothetical protein TERM 244 235398 - 235409 + g 70 -2.2 -5.0538 | overlap 235387 GCTGTGGCCAATCAG GTCA TTAC TGGC TTTTTTGGGATCCAC TERM 245 235655 - 235631 - G 72 -5.6 -4.4261 | opp_overlap 235631 TTGCTAACAGCAAAA GGCCAAGGCT GATTA AGCCTATGCC TAAATTATCGCTTAG Patl_0198 236616 - 235660 - | band 7 protein TERM 246 236584 - 236574 - G 72 -5.4 -4.53036 | overlap 236575 TCACAAACACTAAAA GCAA TGT TTGC ACTGAGAGTAAATAA Patl_0199 238082 - 236751 - | proline dipeptidase TERM 247 237531 - 237543 + g 74 -10.5 -3.28712 | opp_overlap 237529 237530 ACCGGCCTTGAAAGC CGCGG CTG CCGCG TTGTGCCCGGCCACC Patl_0200 240091 - 238178 - | lytic transglycosylase, catalytic TERM 248 241667 - 241652 - g 79 -7.6 -4.41956 | opp_overlap 241651 AGAGACAGAGCAAAA TGTGTC TGAT GACACA GTGATTTGTTCTAAC fadB 240399 - 242558 + | multifunctional fatty acid oxidation complex subunit alpha fadA 242580 - 243740 + | 3-ketoacyl-CoA thiolase TERM 249 243732 - 243744 + T 79 -9.1 -3.82321 | overlap 243730 GCCACTGTGTTCGAG CGCGT ATA ACGCG TGTTTTGATTCAGTA TERM 250 243768 - 243784 + T 100 -10.8 -5.66684 | opp_overlap 243767 243768 TTCAGTATTGAGAAG GGCGCC AGATA GGCGCC TTTTTTTATGGCTTC TERM 251 243784 - 243768 - T 76 -10.8 -2.62463 | opp_overlap 243768, overlap 243767 TTCAGTATTGAGAAG GGCGCC AGATA GGCGCC TTTTTTTATGGCTTC TERM 252 243923 - 243894 - T 72 -8.7 -3.58533 | opp_overlap 243894 TCAGAAGGGGGGAAA CAGCATTAACATA CTGA CAAGTTAATGCTG TTTCAAAAATAACTA TERM 253 243959 - 243984 + T 76 -7.5 -4.1552 | CGAACTTCACTCTAA CGCCGGCATTA GCAA TAAAGCCGTCG TTTCTTGACCAGATG Patl_0203 246038 - 243936 - | TonB-dependent receptor, plug TERM 254 244406 - 244416 + g 74 -8.2 -3.98172 | CGCGGATCTGAGTTT CGCC TTC GGCG TTTATGAGTCTTACT TERM 255 245694 - 245705 + g 76 -2.2 -5.33331 | gap 1 TGAGATATTACCCGG GC-GC ATG GCTGC TTTTTCTTCTATTTC TERM 256 246907 - 246921 + G 75 -11.4 -3.05343 | GGGGCTAACTAGGCG GGCTGC TCC GCAGCC TATTCCGGCTGTCAG Patl_0204 246371 - 247648 + | major facilitator transporter Patl_0205 247723 - 248220 + | hypothetical protein Patl_0206 250039 - 248297 - | hypothetical protein Patl_0207 251219 - 250329 - | twin-arginine translocation pathway signal TERM 257 250654 - 250641 - G 72 -5.3 -4.58395 | TTTAGCTGCTAAAAA GTTAC TGAT GTAAC CGCCAAAACAAAAAC Patl_0208 252048 - 251449 - | TetR family transcriptional regulator Patl_0209 252198 - 252932 + | short chain dehydrogenase TERM 258 252975 - 252993 + F 100 -14.6 -4.9755 | GCCTTATGCTCTTGA GCTGGGTG CAA CACCCAGC TTTTTGGTTCTCTGT TERM 259 253122 - 253137 + F 71 -4 -4.98061 | AGCGTCCTTTTGGAA TAGGCT AGTG AGCTTA TTTTCTTTGGTCTAT TERM 260 253936 - 253908 - g 70 -2.3 -5.00642 | opp_overlap 253916, overlap 253897 253896 253916 TAACCCAGATAAAAA CTGGAAATTCAGC GAT GCCGATATTCAAG AGCGGGAGTTTTGGC Patl_0210 253297 - 254175 + | hypothetical protein Patl_0211 255201 - 254179 - | patatin TERM 261 254432 - 254454 + g 76 -4.8 -4.82667 | CCAGGTGGAGTGATA GTTATTGCCT GAT AGGCGACGAC TTTTTCATCTGATAA TERM 262 255086 - 255096 + g 72 -3.2 -5.02231 | opp_overlap 255078 TAAAAATCCACGCAA TCTC GTA GGGA TTTTTGATGTTTTTC TERM 263 255396 - 255360 - R 91 -13.1 -3.02511 | opp_overlap 255351 255394, overlap 255363 255371 255377 GGGAGGCTTTTAAGA GGAGGTGCAAAGCAACA GCG CATCGCTTTGCACCTAC CCGTTAGAGGGTGTT TERM 264 255393 - 255363 - R 90 -13.4 -2.73994 | opp_overlap 255351, overlap 255360 255371 255377 AGGCTTTTAAGAGGA GGTGCAAAGCAACA GCG CATCGCTTTGCACC TACCCGTTAGAGGGT Patl_0212 256689 - 255445 - | aminotransferase, class V Patl_0213 256999 - 257700 + | hypothetical protein Patl_0214 258101 - 257682 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 265 257852 - 257810 - G 73 -11.4 -2.72049 | opp_overlap 257815, overlap 257815 CATAGGGTTCAATCA CAAAACTCACCTCAGCGGCT TGC AGACGATGAGCTAAGTTTTG CCAATCTTTCATCTT TERM 266 257847 - 257815 - G 72 -5.5 -4.5442 | opp_overlap 257815, overlap 257810 GGTTCAATCACAAAA CTCACCTCAGCGGCT TGC AGACGATGAGCTAAG TTTTGCCAATCTTTC TERM 267 258201 - 258186 - R 100 -10.4 -5.64274 | opp_overlap 258186 CCAGGCATAAAAAAA GCCGCT TAAA AGCGGC TTTCAGAATATAACA TERM 268 258186 - 258201 + r 79 -10.4 -3.59262 | opp_overlap 258186 CCAGGCATAAAAAAA GCCGCT TAAA AGCGGC TTTCAGAATATAACA Patl_0215 259523 - 258225 - | adenylosuccinate synthetase TERM 269 258718 - 258700 - G 73 -9.6 -3.31322 | opp_overlap 258700 258699 GGGAACGGGCCAGAA CCTACACG CGT CGTGTAAG CTTTAACAATACCTA Patl_0216 259790 - 259605 - | hypothetical protein Patl_0217 261346 - 259847 - | periplasmic sensor signal transduction histidine kinase Patl_0218 262065 - 261346 - | two component transcriptional regulator TERM 270 262107 - 262132 + r 86 -4.7 -5.45802 | opp_overlap 262107 TAGAGCGATAAAAAA GCGCTTATC TTTCATTC GATCAGCGC TTTTTATTTTAAACA TERM 271 262132 - 262107 - R 80 -4.7 -5.29782 | opp_overlap 262107 TAGAGCGATAAAAAA GCGCTTATC TTTCATTC GATCAGCGC TTTTTATTTTAAACA Patl_0219 262890 - 262171 - | hypothetical protein Patl_0220 263605 - 262901 - | hypothetical protein Patl_0221 264875 - 263790 - | hypothetical protein TERM 272 264982 - 264963 - H 79 -5 -5.12707 | opp_overlap 264963 264962 GCAAAGTGCAAAAAA GTGTTACT TGCT AGTGACAC CTTTTGAAAGCCGTG TERM 273 265223 - 265235 + H 71 -6.3 -4.25848 | overlap 265230 GCGTTTCTATCGCCG TAAGG CAT CCTTA TTTTGGTGAGGAATT Patl_0222 265252 - 265473 + | hypothetical protein TERM 274 265522 - 265497 - T 86 -11.9 -3.34652 | opp_overlap 265494 265498 265500, overlap 265493 265495 265498 265500 TTGGCAAATAACATA TTAGCCACGTC ATAA GACGTGGCTAT CTAGTTGCTGCGTTA TERM 275 265498 - 265521 + T 100 -15.4 -2.94466 | opp_overlap 265497 265493 265495 265498 265500, overlap 265494 265500 TGGCAAATAACATAT TAGCCACGTC ATAA GACGTGGCTA TCTAGTTGCTGCGTT TERM 276 265521 - 265498 - T 95 -15.4 -2.60309 | opp_overlap 265498 265494 265500, overlap 265497 265493 265495 265500 TGGCAAATAACATAT TAGCCACGTC ATAA GACGTGGCTA TCTAGTTGCTGCGTT TERM 277 265500 - 265519 + T 93 -13.6 -3.02096 | opp_overlap 265498 265497 265493 265495 265500, overlap 265498 265494 GCAAATAACATATTA GCCACGTC ATAA GACGTGGC TATCTAGTTGCTGCG TERM 278 265519 - 265500 - T 91 -13.6 -2.8341 | opp_overlap 265500 265498 265494, overlap 265498 265497 265493 265495 GCAAATAACATATTA GCCACGTC ATAA GACGTGGC TATCTAGTTGCTGCG Patl_0223 266632 - 265559 - | peptidase M42 TERM 279 266046 - 266028 - G 79 -3 -5.42259 | TGAGCTGTAAAAAAA GCGGTTCC TTG GAATCCAC CTTCGAATAAATGCA TERM 280 266588 - 266534 - G 70 -2.1 -5.09173 | gap 2, overlap 266538 CAACACGCGAAAAAA TGAA-TGCTCTGC-GCCGACCACACTG GGG CTGCGCATTAGGCTGCTGAGCAATTCA ATAAAACTGGCTGGC Patl_0224 267616 - 266714 - | phosphoribulokinase TERM 281 268057 - 268081 + G 72 -9.3 -3.54146 | opp_overlap 268056, overlap 268054 AGTAGACGATGATAT GCGTTTACGCA GCT TGCTTGAACGC TATTTGGTTGAGCAG ompR 268013 - 268735 + | osmolarity response regulator TERM 282 270019 - 270005 - g 91 -7.8 -5.22312 | opp_overlap 270005 AGTGACATTAAAAAA CCACCC TGA AGGTGG TTTGATCGCCAGTAT envZ 268761 - 270059 + | osmolarity sensor protein hslO 271007 - 270114 - | Hsp33-like chaperonin Patl_0228 271456 - 271040 - | RNA-binding S4 TERM 283 271386 - 271376 - G 70 -2.4 -5.00884 | ACGTGTTTTAAAAAA GCGC GCA GCCC AAAGCCATTTATCTA TERM 284 271415 - 271427 + g 70 -2 -4.98616 | overlap 271419 TAAGCGAACACTTTG TTCT GTAAA AGAA TTTTTGCTGTTTTGC Patl_0229 271615 - 272310 + | short-chain dehydrogenase/reductase SDR TERM 285 272327 - 272349 + F 84 -12.8 -3.02632 | overlap 272324 GCATTTAGTTTATGC TCGTCTGAGT ATT GCTCAGACGA TGATTTATAAGATTC TERM 286 272733 - 272686 - g 73 -4.3 -4.88918 | overlap 272691 272692 GCACCTGAAACAAAA TTAAACCTGACACTGA-CTGGTG TAGT CACCAGCTCAGTG-CAAGAGCAA GGTGCCGCTATTATT TERM 287 272728 - 272691 - g 93 -10.8 -4.37871 | overlap 272686 272692 TGAAACAAAATTAAA CCTGACACTGA-CTGGTG TAGT CACCAGCTCAGTG-CAAG AGCAAGGTGCCGCTA TERM 288 272728 - 272692 - g 77 -11 -3.21096 | gap 1, overlap 272691 272686 GAAACAAAATTAAAC CTGACACTGA-CTGGTG TAGT CACCAGCTCAGTGCAAG AGCAAGGTGCCGCTA Patl_0230 272455 - 273309 + | general secretion pathway protein C Patl_0231 273315 - 275384 + | general secretion pathway protein D TERM 289 275518 - 275486 - g 75 -9.9 -3.48593 | opp_overlap 275490, overlap 275489 GATGCCCCCATAGAA GATGCTGAACACAAG CAG CTTGCGTTCAGTTTC GCTAAGCGCCATAAA TERM 290 275515 - 275489 - g 71 -10.2 -2.58822 | opp_overlap 275490, overlap 275486 GCCCCCATAGAAGAT GCTGAACACAAG CAG CTTGCGTTCAGT TTCGCTAAGCGCCAT TERM 291 275490 - 275514 + G 82 -11.5 -3.64703 | opp_overlap 275489 275486 CCCCCATAGAAGATG CTGAACACAAG CAG CTTGCGTTCAG TTTCGCTAAGCGCCA TERM 292 276755 - 276737 - g 72 -8.8 -3.64703 | GTGTGTCGACCTAAA GGTTGCGC GGC GTGCAACC ATACTGGTTATCGCG Patl_0232 275387 - 276964 + | general secretory pathway protein E Patl_0233 276966 - 278186 + | general secretion pathway protein F Patl_0234 278186 - 278626 + | general secretion pathway protein G Patl_0235 278669 - 279277 + | general secretion pathway protein H Patl_0236 279274 - 279669 + | general secretion pathway protein I Patl_0237 279656 - 280354 + | general secretion pathway protein J Patl_0238 280351 - 281355 + | general secretion pathway protein K TERM 293 282046 - 282068 + G 83 -13.5 -3.26471 | opp_overlap 282046 GCAAGAATTAAATAA CGTGCTGCT GCAAG AGCAGCACG TTGATATGCCGATGA TERM 294 282068 - 282046 - g 95 -13.5 -4.15577 | opp_overlap 282046 GCAAGAATTAAATAA CGTGCTGCT GCAAG AGCAGCACG TTGATATGCCGATGA Patl_0239 281435 - 282628 + | general secretion pathway protein L TERM 295 282668 - 282651 - g 80 -6.3 -4.86621 | ACCCTTAAGCAAAAA TTCAGTC AATT GACCGAA CGAGAACAGCGCTTG Patl_0240 282630 - 283109 + | general secretion pathway M protein Patl_0241 283106 - 283849 + | type II secretion system protein N TERM 296 283908 - 283875 - T 100 -18.5 -4.23615 | opp_overlap 283877 283884, overlap 283884 AGGATACGTAACAAA TATAAAAAAGGCGCT TAAA AGCGCCTTTTTTATA TATACCAACTATTGC TERM 297 283877 - 283906 + T 100 -16.7 -2.88427 | opp_overlap 283875 283884, overlap 283884 GATACGTAACAAATA TAAAAAAGGCGCT TAAA AGCGCCTTTTTTA TATATACCAACTATT TERM 298 283884 - 283899 + T 100 -10.4 -5.4251 | opp_overlap 283875 283884, overlap 283877 AACAAATATAAAAAA GGCGCT TAAA AGCGCC TTTTTTATATATACC TERM 299 283899 - 283884 - T 100 -10.4 -5.61913 | opp_overlap 283884 283877, overlap 283875 AACAAATATAAAAAA GGCGCT TAAA AGCGCC TTTTTTATATATACC Patl_0242 284914 - 283943 - | fructose-1,6-bisphosphatase TERM 300 284522 - 284504 - G 71 -7.4 -3.85817 | ACCTGGCTGTAGAAA TGCTGATG GAT CATCGGCA TCCATCCACTGCGGA TERM 301 286260 - 286280 + G 100 -11.9 -4.61873 | AAACACTCGCGAAGT CTTGGTCTG CGG CGGACCAAG TTTTCATTTATGAGC Patl_0243 285140 - 286486 + | UDP-N-acetylmuramate Patl_0244 286546 - 287316 + | S1/P1 nuclease TERM 302 287370 - 287335 - T 93 -14.2 -2.9155 | opp_overlap 287338 287344, overlap 287344 TTGGCCAATAGCAGA TAGCAAAAAGGCAGCG AATT CGCTGCCTTTTTATTA GATGTACTGGTAACT TERM 303 287338 - 287367 + T 93 -13.7 -3.14944 | opp_overlap 287335 287344, overlap 287344 GCCAATAGCAGATAG CAAAAAGGCAGCG AATT CGCTGCCTTTTTA TTAGATGTACTGGTA TERM 304 287344 - 287361 + T 100 -12.7 -5.12068 | opp_overlap 287335 287344, overlap 287338 AGCAGATAGCAAAAA GGCAGCG AATT CGCTGCC TTTTTATTAGATGTA TERM 305 287361 - 287344 - T 100 -12.7 -4.85129 | opp_overlap 287344 287338, overlap 287335 AGCAGATAGCAAAAA GGCAGCG AATT CGCTGCC TTTTTATTAGATGTA Patl_0245 288458 - 287391 - | uroporphyrinogen decarboxylase TERM 306 287901 - 287891 - G 74 -5.4 -4.6955 | CATTAAGATATAAAA TGAC AGA GTCA GCGAGTTTATCGAGT TERM 307 288671 - 288687 + r 100 -12.3 -5.38249 | opp_overlap 288666 GCTAAAATATTCGAA CCCCACT CAA AGTGGGG TTTTTTATGCTTGGT Patl_0246 289525 - 288710 - | NUDIX hydrolase Patl_0247 289860 - 290291 + | ferric uptake regulator family protein Patl_0248 290341 - 290805 + | CheC-like protein Patl_0249 290795 - 291232 + | hypothetical protein TERM 308 291345 - 291331 - g 91 -6.4 -5.55664 | opp_overlap 291330 291331 TTATTATGAAAAAAA CCATGA CAG CCATGG GTATCTTACTTGCTT Patl_0250 291321 - 292427 + | OmpA/MotB TERM 309 292449 - 292498 + T 93 -13.9 -3.06915 | gap 1, opp_overlap 292464, overlap 292464 CGTTCTATAAGCGTT TCGAGCACA-AAAAAAGGAGGTGA TAT TCACCTCCTTTTTTATGTCTGCGA TTCAGTCGCATAGCT TERM 310 292482 - 292464 - T 100 -13.2 -5.67063 | opp_overlap 292449 292464 TCGAGCACAAAAAAA GGAGGTGA TAT TCACCTCC TTTTTTATGTCTGCG TERM 311 292464 - 292482 + T 100 -13.2 -5.4251 | opp_overlap 292464, overlap 292449 TCGAGCACAAAAAAA GGAGGTGA TAT TCACCTCC TTTTTTATGTCTGCG Patl_0251 293967 - 292531 - | replicative DNA helicase Patl_0252 295885 - 294077 - | ATP-dependent DNA helicase RecQ TERM 312 295848 - 295834 - G 79 -8.6 -4.33151 | overlap 295828 295827 CATCATAACCGAAAA CCGTTT TCA AAACGG ATTGGGCGCTGTTGA TERM 313 296056 - 296067 + G 70 -2.2 -5.09225 | GAGCAGCTGGCTGAA TTCG TCAT CGAG TTTTTTCAATCCAGT Patl_0253 296014 - 296487 + | hypothetical protein Patl_0254 297028 - 296594 - | globin TERM 314 296746 - 296768 + g 70 -9.8 -3.04263 | opp_overlap 296746, overlap 296748 TCATGCCTGCATGAA CACGGGCCAT AGT GTCGCCCGTG TATTCACAATGCCCT Patl_0255 297876 - 297028 - | hypothetical protein Patl_0256 300202 - 297866 - | diguanylate cyclase/phosphodiesterase TERM 315 298127 - 298111 - G 71 -9.5 -3.16218 | opp_overlap 298110 298109, overlap 298109 GAGAATCAAGAGATA GGACAAA GCT TTTGTCC ACTTTTAAAGTAGTG Patl_0257 300925 - 300203 - | hypothetical protein Patl_0258 301220 - 301822 + | hypothetical protein TERM 316 302158 - 302191 + G 70 -2 -4.93968 | gap 1 GCGAGATTTGGTCAA CAATATCA-AGAATT TTATC AATTTTGTGATGTTG TTTTTACTTCTCAGT TERM 317 302727 - 302741 + G 75 -2.8 -5.24129 | overlap 302729 ATGTAGGCGATTCAG TTGTGA CAG TCGCGA TTTTTTGTCCAACGG Patl_0259 301976 - 302893 + | MscS mechanosensitive ion channel TERM 318 304281 - 304295 + G 71 -7.1 -4.02736 | ACACCCTAGAGGGCG CCACC CAAGA GGTGG TTTCTGATATCGATT Patl_0260 303017 - 304756 + | surface antigen (D15) Patl_0261 304753 - 308532 + | hypothetical protein TERM 319 308671 - 308687 + F 81 -5.9 -5.11613 | CTGGGGCAGTCTCAT GTCATAA AAA TTGTGAC TTTTTTCGATAGTGT TERM 320 309175 - 309155 - g 73 -9.7 -3.30039 | overlap 309129 309153 CATGGATAAGCAACA GCGCCAGTA TTT CACTGACGC GAGCCAATTTAGTGA Patl_0262 308799 - 310136 + | MgtE intracellular region TERM 321 310169 - 310183 + F 72 -3.6 -5.14563 | opp_overlap 310172, overlap 310172 CCTAGGACGGAGCAA TTATAC AAT GTGTAA TTTTTTCGTAGCCCA TERM 322 310306 - 310327 + F 86 -10.2 -4.06179 | CTTACTACACCCAGC CGAAGGAG CATTAA CTCCTTCG TTTATCCGTTTTAAA Patl_0263 310347 - 310526 + | hypothetical protein Patl_0264 310695 - 311258 + | transport-associated Patl_0265 311580 - 312512 + | diguanylate cyclase TERM 323 312613 - 312627 + T 90 -11.4 -4.02736 | opp_overlap 312613 AAGTACATAAAAAAA GCGCCA TGT TGGCGC TTTCTAGTGTCGCTT TERM 324 312627 - 312613 - T 100 -11.4 -5.75478 | opp_overlap 312613 AAGTACATAAAAAAA GCGCCA TGT TGGCGC TTTCTAGTGTCGCTT Patl_0266 313947 - 312664 - | phosphoribosylamine--glycine ligase TERM 325 313996 - 314015 + r 82 -8.5 -4.20084 | opp_overlap 313996 GGCTATTTATCAAAA CGCCGCT CAATAA GGCGGCG TTTTGAATGGCTAAT TERM 326 314015 - 313996 - R 77 -7.8 -4.2828 | opp_overlap 313996 GGCTATTTATCAAAA CGCCGC TCAATAAG GCGGCG TTTTGAATGGCTAAT Patl_0267 314855 - 314049 - | hypothetical protein TERM 327 314333 - 314367 + g 100 -13.9 -4.4017 | gap 1, opp_overlap 314344 314356 314364, overlap 314336 314364 CACCAAGCACACCGC CGACCTTTAAAGCTTT GTAA AAAGCTTTAAAGG-CG TTTTCTACGCCTTCA TERM 328 314336 - 314365 + g 90 -15.3 -2.5369 | opp_overlap 314344 314356 314364, overlap 314333 314364 CAAGCACACCGCCGA CCTTTAAAGCTTT GTAA AAAGCTTTAAAGG CGTTTTCTACGCCTT TERM 329 314993 - 314961 - R 80 -11.3 -2.90992 | overlap 314958 AATCTGCTCAAATCA GCGAAGAGCGATG GAGTAAA CACCGCGCTTCGC TTGCGATTAATGCAG Patl_0268 316635 - 315013 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 330 316698 - 316725 + r 100 -7 -5.66868 | opp_overlap 316703, overlap 316703 AAGTATAGCGCATAC AAAAAGAGCACC CTAG GGTGCTCTTTCA TTTTTTTACTTAGTT TERM 331 316703 - 316720 + r 93 -11.3 -4.53225 | opp_overlap 316703, overlap 316698 TAGCGCATACAAAAA GAGCACC CTAG GGTGCTC TTTCATTTTTTTACT TERM 332 316720 - 316703 - R 95 -11.3 -4.9792 | opp_overlap 316703 316698 TAGCGCATACAAAAA GAGCACC CTAG GGTGCTC TTTCATTTTTTTACT Patl_0269 317028 - 316735 - | helix-turn-helix, Fis-type Patl_0270 318059 - 317058 - | nifR3 family TIM-barrel protein TERM 333 318080 - 318069 - R 78 -7.2 -4.3208 | CTGCATAATTCAAAA CGCG AAAT CGCG CAAAAACTGTCCGGT Patl_0271 318676 - 318371 - | hypothetical protein Patl_0272 318844 - 319689 + | thioredoxin domain-containing protein TERM 334 319751 - 319771 + T 100 -9.8 -6.11392 | opp_overlap 319751 AGGGAAATTCAATAA TACCAAGG CCATT CCTTGGTA TTTTTTTATTTGTTT TERM 335 319771 - 319751 - T 79 -9.8 -3.78234 | opp_overlap 319751 AGGGAAATTCAATAA TACCAAGG CCATT CCTTGGTA TTTTTTTATTTGTTT Patl_0273 320709 - 319825 - | LysR family transcriptional regulator TERM 336 320539 - 320518 - G 70 -5.1 -4.39426 | gap 1, overlap 320520 CACACGTTGATAAAA CTCTTCC-CC TTC GGCGGAAGGG CGCACATTACGACTA Patl_0274 320842 - 321492 + | redoxin Patl_0275 321604 - 322287 + | haloacid dehalogenase, type II TERM 337 322349 - 322378 + F 100 -14.4 -5.09685 | opp_overlap 322340 AAAAATGCTTTTCAA GCCCTCGAATGC CTCGCC GTATTCGAGGGC TTTTTGTCTGTATTA Patl_0276 322466 - 323392 + | esterase/lipase/thioesterase family protein Patl_0277 323423 - 324010 + | pentapeptide repeat-containing protein TERM 338 324802 - 324818 + F 86 -10.9 -3.79505 | opp_overlap 324805, overlap 324805 AATACTGTTTTAGCA CAAGACC TAA GGTCTTG TTTAACTATTAATTT TERM 339 324805 - 324815 + F 71 -6.8 -4.011 | opp_overlap 324805, overlap 324802 ACTGTTTTAGCACAA GACC TAA GGTC TTGTTTAACTATTAA TERM 340 324887 - 324898 + G 77 -3.6 -5.10461 | ACAGTAATCACTTTA GCCG CTGG TGGC TTTTTATTGAATGCG Patl_0278 324848 - 325192 + | hypothetical protein TERM 341 325563 - 325575 + G 76 -4.1 -5.01732 | CAGCATTCCTGCAGG TGAGC AGC GTTCA TTTTTTGCCAACGTT Patl_0279 325456 - 326493 + | succinylglutamate desuccinylase/aspartoacylase TERM 342 326502 - 326526 + F 79 -11.6 -2.69042 | opp_overlap 326498, overlap 326499 326498 326505 CCAGTAATTCACTGG GAAGTGCAAA TGGTC TTTGCACTTC TGACTTTACTAATCT Patl_0280 326636 - 327058 + | hypothetical protein Patl_0281 327084 - 327299 + | tryptophan-rich Ignore TERM 343 329162 - 329142 - g 72 -6.1 -4.27316 | opp_overlap 329143, overlap 329143 329159 CTTTCTAAGCCAAAA GTGCTGGTC ATC AACCAGCAT TTCGATGCGATCCCG TERM 344 329161 - 329143 - g 71 -9.6 -3.16068 | opp_overlap 329143, overlap 329142 329159 TTTCTAAGCCAAAAG TGCTGGTC ATC AACCAGCA TTTCGATGCGATCCC TERM 345 329143 - 329161 + G 76 -8.9 -3.65902 | opp_overlap 329142 329143 329159 TTTCTAAGCCAAAAG TGCTGGT CATCA ACCAGCA TTTCGATGCGATCCC TERM 346 329309 - 329298 - g 81 -3.6 -5.42514 | TTAGAAAGCAAAAAA GAGC CCCA GCCC AATGTAAATACAAGT Patl_0282 327666 - 329345 + | toxin secretion ABC transporter ATP-binding protein Patl_0283 329338 - 330366 + | membrane fusion protein TERM 347 330973 - 330961 - g 71 -3.3 -4.87273 | opp_overlap 330961, overlap 330962 AAGAGGGCATAAAAA CCCGC GTC GCAGA AGGCGATGTGGCTGA TERM 348 331422 - 331412 - g 78 -5.4 -4.81851 | overlap 331414 AGCCAAAGCCAAAAA GAGT AGA ACTC AGTATGAAATCTACG TERM 349 331486 - 331457 - g 70 -2.1 -4.96773 | overlap 331461 GGAATCAAAAACAAA CGCATTACGTCAA TCAA TTGATGCAAAACG ACAAGAACGTCTGGT Patl_0284 330366 - 331781 + | Outer membrane protein-like Patl_0285 332266 - 331820 - | hypothetical protein Patl_0286 333713 - 332361 - | glutamate dehydrogenase TERM 350 332543 - 332557 + g 71 -7.8 -3.92869 | opp_overlap 332527, overlap 332527 GCCAAGTTTGCATAC TGGCGT TTT GCGCCA TTTCTAACTGACTGG TERM 351 332765 - 332755 - G 77 -6.8 -4.51174 | opp_overlap 332755 GTAGCACAAGGAAAA GCTG CAT CAGC TTGATAGCGCCACAC Patl_0287 334144 - 333758 - | GreA/GreB family elongation factor TERM 352 333870 - 333854 - G 70 -9.4 -3.45768 | GCTAAGACCAATCAA CGCCGA GCCTA TCGGCG CGAAGACTGAAATGC TERM 353 334418 - 334442 + r 100 -15.8 -3.56972 | CAAAAAGGGACAGCT GCCGAGCGTA AGGAC TACGCTCGGC TTAATTTGGTAAGGT Patl_0288 335567 - 334620 - | hypothetical protein TERM 354 335098 - 335108 + g 74 -6.8 -4.32201 | GGGTAAAAGTCCCAC TGGC CTT GCCA TTTTGCATTGCTTGA Patl_0289 337343 - 335571 - | Na+/solute symporter Patl_0290 338494 - 337355 - | oxidoreductase-like Patl_0291 339817 - 338546 - | mandelate racemase/muconate lactonizing-like protein Patl_0292 339963 - 340988 + | LacI family transcription regulator TERM 355 341097 - 341112 + T 90 -9 -5.07567 | opp_overlap 341097 GGAGGTATAAAAAAA CCGACT AAGA AGTCGG TTTTTTGCAATCTGA TERM 356 341112 - 341097 - T 100 -9 -5.64274 | opp_overlap 341097 GGAGGTATAAAAAAA CCGACT AAGA AGTCGG TTTTTTGCAATCTGA Patl_0293 343094 - 341181 - | choline/carnitine/betaine transporter TERM 357 341430 - 341405 - G 74 -8.3 -3.91144 | opp_overlap 341409 341411 341412, overlap 341409 GGTATACCGCATAAA TAAACTCGGCG TCTT CGCCATGTTTA ACGGTTAGTGTCACG TERM 358 341426 - 341409 - G 72 -4.7 -4.56367 | opp_overlap 341409 341411 341412, overlap 341405 TACCGCATAAATAAA CTCGGCG TCTT CGCCATG TTTAACGGTTAGTGT TERM 359 343495 - 343528 + r 90 -9.7 -4.37013 | gap 1, opp_overlap 343498, overlap 343496 343499 343501 GCCTTGCAATGTACA CCAGTAGCGCAGCTAA CGT TTAGCTGCGCTG-TGA TTTTCCTCGTTACTT TERM 360 343496 - 343527 + r 91 -13.2 -3.21124 | gap 1, opp_overlap 343498, overlap 343495 343499 343501 CCTTGCAATGTACAC CAGTAGCGCAGCTAA CGT TTAGCTGCGCTG-TG ATTTTCCTCGTTACT TERM 361 343526 - 343498 - R 72 -10.3 -2.66733 | opp_overlap 343496 343495 343499 343501 TTGCAATGTACACCA GTAGCGCAGCTAA CGT TTAGCTGCGCTGT GATTTTCCTCGTTAC TERM 362 343499 - 343525 + r 100 -16 -3.16033 | opp_overlap 343498, overlap 343496 343495 343501 TGCAATGTACACCAG TAGCGCAGCTAA CGT TTAGCTGCGCTG TGATTTTCCTCGTTA TERM 363 343501 - 343523 + r 100 -16.4 -3.12923 | opp_overlap 343498, overlap 343499 343496 343495 CAATGTACACCAGTA GCGCAGCTAA CGT TTAGCTGCGC TGTGATTTTCCTCGT Patl_0294 344942 - 343545 - | putative lipoprotein TERM 364 344372 - 344392 + g 71 -7.6 -3.99985 | TGTAATCTAGCGTTG GCAGTGGA TCTGT TTCACTGC TTATTTGCGTATCTG Patl_0295 347369 - 344976 - | TonB-dependent receptor TERM 365 345564 - 345580 + g 72 -6.5 -4.22652 | opp_overlap 345564 CGCGTTGAATACGAA CCCAATG TCT CCTTGGG TTTTACGTAATGTGA Patl_0296 347587 - 348264 + | hypothetical protein Patl_0297 348267 - 348746 + | ferric uptake regulator family protein Patl_0298 348754 - 349164 + | hypothetical protein Patl_0299 349169 - 350416 + | cobalamin synthesis protein, P47K Patl_0300 350413 - 351114 + | hypothetical protein TERM 366 351176 - 351206 + F 85 -5.4 -5.33921 | overlap 351177 AGAAGGTCAATTGTT CGAACGATAACAGG CAA CCATTTATCGTTCA TTTTTTCATTCATTT TERM 367 351177 - 351205 + F 76 -8.9 -3.77912 | overlap 351176 GAAGGTCAATTGTTC GAACGATAACAGG CAA CCATTTATCGTTC ATTTTTTCATTCATT Patl_0301 351274 - 352194 + | putative GTP cyclohydrolase Patl_0302 352178 - 353173 + | endonuclease/exonuclease/phosphatase Patl_0303 353848 - 353189 - | hypothetical protein TERM 368 353439 - 353429 - G 100 -6.8 -5.86965 | opp_overlap 353429 AGGCACCAAAAAAAA GCGT TTA ACGC TTCTGTCTTCGTTCA TERM 369 353846 - 353810 - G 80 -5.9 -5.00884 | opp_overlap 353812 ACCCGCTCCAAAAAA GAGCAGCAAAATAGCAG TCA CTTTAATTTTACTGCTC ATTGAGGGGGAACTC Patl_0304 354473 - 353934 - | hypothetical protein TERM 370 354111 - 354100 - G 70 -2.2 -5.00884 | ACCCCTTCTAAAAAA CGAA CGTT CTCG CTACCTGAAAAGGTA Patl_0305 355055 - 354474 - | hypothetical protein TERM 371 355334 - 355322 - g 73 -4.1 -4.90906 | opp_overlap 355327, overlap 355327 CGACAATATTAAAAA CAAAG CCC CTCTG GCGATTAATCTTAAA Patl_0306 355161 - 356015 + | ABC transporter related TERM 372 356066 - 356054 - g 74 -3.4 -5.03314 | opp_overlap 356057, overlap 356057 TGTAGCCGCAAAAAA TCAG TCATT CTGA CCTTTCTATCTTTGT TERM 373 356294 - 356306 + G 70 -4.8 -4.42464 | GATCAGCAGGTAGCG TGGG CCATT CCCA TTTCTTTAGGAGATT Patl_0307 356009 - 357241 + | hypothetical protein TERM 374 357314 - 357300 - T 82 -11.4 -3.11192 | opp_overlap 357300 CATATCATCACTGAA TGCGCC TAA GGCGCA TTTCTTTGTGCAGGT TERM 375 357300 - 357314 + T 93 -11.4 -4.55697 | opp_overlap 357300 CATATCATCACTGAA TGCGCC TAA GGCGCA TTTCTTTGTGCAGGT Patl_0308 357682 - 357305 - | flavoprotein TERM 376 357579 - 357554 - G 71 -3.9 -4.83615 | gap 1, overlap 357555 357558 TAGCTCGGATAAAAA CGTACGCATGCC CAC GGC-TGCGCGCA TGCCGCCCCATTGCC Patl_0309 358229 - 357969 - | hypothetical protein TERM 377 358332 - 358354 + H 90 -10.6 -4.15106 | overlap 358335 AAGTGTTTGCATGGT TAAGCGAGCG AAG CGCTGGCTTA TTTTAACAATTAATC TERM 378 358335 - 358351 + H 77 -7.9 -4.19577 | overlap 358332 TGTTTGCATGGTTAA GCGAGCG AAG CGCTGGC TTATTTTAACAATTA Patl_0310 358477 - 359523 + | beta-lactamase-like TERM 379 359532 - 359578 + T 82 -3.8 -5.38958 | opp_overlap 359546, overlap 359546 TGATTAGCTAAGGAC GTTAAAACCAAAAAGGGCAAAT ATA ATTTGCCCTTTTTCTTGCTCAC TTTTTGTTTATCGCT TERM 380 359564 - 359546 - T 100 -11.8 -5.0925 | opp_overlap 359532 359546 CGTTAAAACCAAAAA GGGCAAAT ATA ATTTGCCC TTTTTCTTGCTCACT TERM 381 359546 - 359564 + T 100 -11.8 -5.14163 | opp_overlap 359546, overlap 359532 CGTTAAAACCAAAAA GGGCAAAT ATA ATTTGCCC TTTTTCTTGCTCACT TERM 382 359591 - 359612 + T 70 -8.7 -3.31144 | opp_overlap 359607 359611 CACTTTTTGTTTATC GCTGCGCTA TCAA TAACGCAGC TTCTCACCCTGGACA TERM 383 359642 - 359607 - T 89 -11.8 -3.71848 | opp_overlap 359591, overlap 359611 CTGCGCTATCAATAA CGCAGCTTCTCACCCT GGAC AGGGTGGGAAGCAGTG GGATTAGAAGCTGTA TERM 384 359638 - 359611 - T 93 -14.2 -2.67428 | opp_overlap 359591, overlap 359607 GCTATCAATAACGCA GCTTCTCACCCT GGAC AGGGTGGGAAGC AGTGGGATTAGAAGC Patl_0311 361739 - 359646 - | TonB-dependent siderophore receptor TERM 385 360686 - 360667 - G 82 -2.8 -5.54894 | AATGCACTAAAAAAA CCTGATGT TTTT ACTTCAAG TAAATCGGAATCGAT TERM 386 362183 - 362203 + H 71 -6.3 -4.17914 | overlap 362186 TTCGCTTTACAGCAT TAATGGTAA TCA TTATCATTA TCTTTTTATTGGGTA Patl_0312 362341 - 362946 + | hypothetical protein TERM 387 363404 - 363427 + G 72 -5.3 -4.59081 | overlap 363398 363396 TCCTCGTTAGTGCGT TTGGTGCAC TGTTGT GTGCGCTAA TTTTGTCTGGCTTTC Patl_0313 362950 - 364440 + | PepSY-associated TM helix TERM 388 364512 - 364500 - T 83 -4.8 -5.26316 | CGATGGTATAAAAAA GCTC AATAA GAGC GGTATTGTTGACGCC Patl_0314 365470 - 364502 - | AraC family transcriptional regulator TERM 389 365980 - 365996 + G 78 -12.3 -2.63112 | overlap 365982 TGTATTGGGGTCAGT GAGCCTG GTG CAGGCTC TGATGTGGCAGGTTT Patl_0315 365581 - 366756 + | acyl-CoA dehydrogenase-like Patl_0316 366862 - 367824 + | 2-nitropropane dioxygenase, NPD TERM 390 368977 - 368995 + G 91 -6.7 -5.47218 | ATACAATTATGTGAA CAGTCGG GCTCG CCGATTG TTTTTTTGCATAACA Patl_0317 367885 - 369498 + | carboxyl transferase Patl_0318 369583 - 370395 + | enoyl-CoA hydratase/isomerase TERM 391 371099 - 371069 - g 80 -6 -4.96848 | opp_overlap 371074 CGGCGCAGATAAAAA CCGCACGCTCTGAA GCA CTTAGCGCGTTCGG TAGCGGTGAATTAAT Patl_0319 370438 - 372507 + | carbamoyl-phosphate synthase L chain, ATP-binding TERM 392 372635 - 372655 + G 75 -6.1 -4.52589 | TGGTATTTGATTATT TAGCCGAAG TCA CTATGGCTA TTTTGTCTCAAGCCA Patl_0320 372520 - 374331 + | hypothetical protein Patl_0321 374405 - 375277 + | short-chain dehydrogenase/reductase SDR TERM 393 376602 - 376591 - g 70 -2.2 -4.91357 | AAAGACACAATAAAA TCCG GTGG CGAA AATGTCTCATCACAA Patl_0322 375310 - 376905 + | AMP-dependent synthetase and ligase TERM 394 376961 - 376948 - T 76 -6.7 -4.45083 | opp_overlap 376946 376948 GCTACATTGAGAAAA GCACT TATA AGTGC TATTTCTAGCGGGAT Patl_0323 378887 - 377376 - | hypothetical protein TERM 395 377677 - 377707 + g 78 -6.2 -4.67011 | AATACCACTTCACCA GCATCATTGACGGA GCT TTCATAAATGATGC TTTTTCCATCCACTT TERM 396 378952 - 378964 + H 88 -2.6 -5.95166 | TACATACAATAAAAG TGCC AAGAA GGCG TTTTTTTTAATTACA TERM 397 379497 - 379512 + H 71 -6 -4.25873 | TTGTCATTGTGTTTC CCGCCG TGTG CGGCAG TCTTTTTTGTGCGGA TERM 398 380736 - 380753 + H 78 -4.1 -5.252 | overlap 380725 380723 380738 TTGAGGGGTCTTCCC CCCTTCT GAGC AGAAGAG TTTTTTATACGAATC Patl_0325 380844 - 381410 + | hypothetical protein TERM 399 381412 - 381469 + T 100 -15.7 -3.15593 | opp_overlap 381412 381421, overlap 381417 381417 381419 TCAATTCCGATTAGA CCTATCACACCTGTACCACCTATATCA AAAT TGGGACAGGTGGTATAGGTGGGTTAGG TGTATATGTATTTTT TERM 400 381469 - 381412 - T 91 -13.5 -2.79831 | opp_overlap 381412 381417 381417 381419, overlap 381421 TCAATTCCGATTAGA CCTATCACACCTGTACCACCTATATCA AAAT TGGGACAGGTGGTATAGGTGGGTTAGG TGTATATGTATTTTT TERM 401 381417 - 381464 + T 85 -12.8 -3.18511 | opp_overlap 381412 381421, overlap 381412 381417 381419 TCCGATTAGACCTAT CACACCTGTACCACCTATATCA AAAT TGGGACAGGTGGTATAGGTGGG TTAGGTGTATATGTA Patl_0326 381950 - 381516 - | hypothetical protein Patl_0327 382518 - 381964 - | deoxycytidine triphosphate deaminase Patl_0328 383959 - 382505 - | hypothetical protein Patl_0329 384455 - 383970 - | hypothetical protein TERM 402 385030 - 385044 + G 79 -2.8 -5.32599 | TTATTGTTGGGGATG TTTGCT CAC AGCCAA TTTTTGTCTTTTATC Patl_0330 384766 - 385071 + | hypothetical protein TERM 403 385476 - 385486 + G 72 -8.2 -3.72324 | opp_overlap 385476 385474 CCCATTGGACGAAGA GCGC GTG GCGC TTATTCGTAACCATG Patl_0331 385210 - 386595 + | hypothetical protein TERM 404 386688 - 386648 - T 95 -8.9 -5.39905 | AGCAAACAATAAAAA GCCCGCATGAAACCAAGGG GGA CACAGTGTTTCATGCAGGC TAGTACTACCTGTTA Patl_0332 387990 - 386770 - | N-acylglucosamine 2-epimerase Patl_0333 389298 - 388003 - | hypothetical protein TERM 405 389056 - 389068 + g 70 -9.1 -3.31144 | ATGAAATAGTATGTG CGGCA CCA TGCCG TTATCCCACTGGCCG Patl_0334 389502 - 391949 + | TonB-dependent receptor TERM 406 391967 - 391984 + F 73 -8.4 -3.76952 | overlap 391981 TAAGTTTGTGTGTAC TGGCGC TTCCTT GCGCCA TTTAGGTTGAATAGC TERM 407 391989 - 392039 + F 88 -10.7 -4.05629 | gap 1, opp_overlap 391998, overlap 391981 391990 TCCTTGCGCCATTTA GGTTGAATAGCTTGCTCACTGAAA GGTA TCTCAGTGAGCAA-CTATTCACCG TTCTTTCAATTTAGT TERM 408 391990 - 392038 + F 95 -14.2 -3.02293 | gap 1, opp_overlap 391998, overlap 391981 391989 CCTTGCGCCATTTAG GTTGAATAGCTTGCTCACTGAAA GGTA TCTCAGTGAGCAA-CTATTCACC GTTCTTTCAATTTAG TERM 409 392030 - 391998 - f 78 -10.8 -3.04461 | gap 1, opp_overlap 391981 391990 391989 CATTTAGGTTGAATA GCTTGCTCACTGAAA GGTA TCTCAGTGAGCAA-C TATTCACCGTTCTTT Patl_0335 392102 - 393682 + | SSS family solute/sodium (Na+) symporter Patl_0336 393692 - 394930 + | hydroxypyruvate reductase TERM 410 394964 - 394981 + F 71 -6.9 -4.08221 | opp_overlap 394964 AGATGCTGACACTAA GCGCCCT AACT AGGGGGC TTTACTTATCTTAGG Patl_0337 395040 - 396245 + | ROK domain-containing protein TERM 411 396274 - 396298 + T 100 -14.5 -5.24129 | opp_overlap 396274 ACGAATATCAAAAAA GCGTATTGAAT TGT ATTCAATACGC TTTTTTGTGGGGCCA TERM 412 396298 - 396274 - T 100 -14.5 -5.28683 | opp_overlap 396274 ACGAATATCAAAAAA GCGTATTGAAT TGT ATTCAATACGC TTTTTTGTGGGGCCA Patl_0338 397353 - 396334 - | cyclic-AMP phosphodiesterase TERM 413 397332 - 397308 - G 100 -10.1 -5.9873 | opp_overlap 397308 TGATTACAAAAAAAA GCGAAATGG TCAGTAG CCATTTCGC TTTTGTAATAATATG TERM 414 397308 - 397332 + g 93 -10.8 -4.49981 | opp_overlap 397308 TGATTACAAAAAAAA GCGAAATGGT CAGTA GCCATTTCGC TTTTGTAATAATATG Patl_0339 398536 - 397355 - | HemY-like TERM 415 397604 - 397633 + g 79 -8.7 -4.33907 | gap 1 TAACCATTGTTCTAG CTGTTTCAG-CGAC GTG GTTGGCTGAGACAG TTTTAACTCTTTATA TERM 416 398380 - 398368 - G 77 -3.4 -5.2189 | TTAACCATGAAAAAA GTAG CAAAC CTAC GATAACCAGGATCGT Patl_0340 399909 - 398533 - | protein of unknown function DUF513, hemX Patl_0341 400632 - 399910 - | uroporphyrinogen III synthase HEM4 TERM 417 400129 - 400160 + g 72 -3 -5.05228 | overlap 400131 TCTAATCTGCTCTGC TTGCCACTCTTG TGTGGCTT TAGGCGTGGCAA TTTTTATCCTTTGAT TERM 418 400236 - 400248 + g 71 -6.9 -4.13767 | GGGCTAAATCTTCAC GGCCG CCT TGGCC TTTTAAAATCACGAC TERM 419 400589 - 400579 - G 79 -8.2 -4.2461 | opp_overlap 400585 ACCCGCAGTAATAAA GCGC GCT GCGC TTGGGGCGCATTTTT TERM 420 400585 - 400599 + g 84 -7.8 -4.8048 | opp_overlap 400579 AGTAATAAAGCGCGC TGCGCT TGG GGCGCA TTTTTGCTCTGGGCG Patl_0342 401565 - 400636 - | porphobilinogen deaminase Patl_0343 402231 - 401752 - | GCN5-related N-acetyltransferase TERM 421 402088 - 402058 - G 74 -5.5 -4.58236 | gap 1, opp_overlap 402058 GATAAAAGAGGAAAA CGCCC-CAACAA AGTGAAAA TCGTTGTGGGCG ATTTGTTGTGCAGAA Patl_0344 402738 - 402259 - | YHS domain-containing protein Patl_0345 403583 - 402912 - | carboxylesterase Patl_0346 403956 - 403630 - | frataxin-like Patl_0347 404076 - 404723 + | guanylate kinase TERM 422 405026 - 405006 - g 73 -10.5 -3.08738 | overlap 404996 AAGAAGGTCACGTAA CCGCATCTA CTC TAGATGCAG AAAACTTGCGTGACC Patl_0348 404828 - 405100 + | DNA-directed RNA polymerase, omega subunit TERM 423 405151 - 405180 + F 79 -10.9 -3.17075 | gap 1, opp_overlap 405159, overlap 405159 AAAGCCTGATCCTAG CGGC-AGAACATCA AAT TGATGTTTTAGCCG TTGGCTTAGCGCCCA TERM 424 405159 - 405171 + F 71 -6.3 -4.1466 | opp_overlap 405159, overlap 405151 ATCCTAGCGGCAGAA CATCA AAT TGATG TTTTAGCCGTTGGCT TERM 425 405349 - 405337 - g 72 -9.1 -3.65046 | GTGGTAGCCCAAGAA GCCCA TGA TGGGC AGATGCGTTCCAGTG Patl_0349 405241 - 407370 + | metal dependent phosphohydrolase Patl_0350 407392 - 407778 + | putative endoribonuclease L-PSP TERM 426 408403 - 408429 + G 71 -10.2 -2.70946 | overlap 408400 CATGGTCGGTATGGT GCAGTCATTGAA CGT TTCGGTGGCTGC TGCTGTGGTGTTATA Patl_0351 407972 - 408724 + | tRNA guanosine-2'-O-methyltransferase Patl_0352 408761 - 409405 + | redoxin TERM 427 409686 - 409706 + G 71 -6.8 -4.1235 | AAGTTGGTTAAGCTT GGCCTGCA ATCAG TGCAGGAC TTGTTATTTCACTTG Patl_0353 409608 - 411683 + | ATP-dependent DNA helicase RecG TERM 428 411815 - 411802 - g 72 -5.3 -4.58283 | GAACTTGTTGAAAAA GCTAA AAAC TTAGC ATCTGTGTGGCAATT Patl_0354 411676 - 412524 + | hypothetical protein Patl_0355 412575 - 412970 + | glyoxalase/bleomycin resistance protein/dioxygenase Patl_0356 413007 - 413486 + | redoxin Patl_0357 415112 - 413526 - | hypothetical protein TERM 429 414386 - 414369 - G 74 -5.5 -4.72007 | overlap 414365 414379 GGGTATGAAAACAAA GGTGTCA TAAT TGACCCC TTGCCAATCAAATGT TERM 430 415037 - 415014 - G 70 -5.3 -4.53857 | AGGAAAAAGAAACAA TGTCGTTGC TATCAT GCAAAGACA AGCTAACCACCAGTT Patl_0358 416025 - 415114 - | ABC transporter related TERM 431 415209 - 415229 + g 70 -4.7 -4.46212 | CATTAGGGGGAGTGT CGTGAATAA CCC TTAATCGCG TTTTCTCGTCAAAAG TERM 432 416129 - 416146 + H 76 -3.5 -5.18357 | gap 1 AATAGTGTGATCTTT TGGT-AGT TTT ACTTACCA TTTTTTGCTAGCTTG Patl_0359 416249 - 416995 + | LuxR family transcriptional regulator Patl_0360 417951 - 416992 - | hypothetical protein TERM 433 417628 - 417602 - G 72 -3 -5.02323 | overlap 417604 TTATTAGAAAGAAAA TTGGTTTTATGA TTG TCACTAAACCTA AAATGAGCAGGTATA TERM 434 417805 - 417817 + g 71 -7.7 -3.93262 | AGATTCCAGCTGAGT GCTTC CTT GAAGC TTTAGTATCTTGCCC TERM 435 418045 - 417995 - H 77 -10.6 -2.90714 | opp_overlap 417991, overlap 418028 TTAAATTTTTATATA TCCTGTTAGATCTGACGGTGTTTT ATA AAAATACTGTCAGATACTACAGGA GAAAATTATTGGAAT TERM 436 418482 - 418470 - g 85 -3.5 -5.52986 | ACCTGAGGAAAAAAA TATTT GGG AAATA AGTCGCTTTGCTATT Patl_0361 418168 - 418761 + | autoinducer synthesis protein Patl_0362 419558 - 419352 - | hypothetical protein Patl_0363 419822 - 419607 - | hypothetical protein TERM 437 419823 - 419833 + r 73 -2.4 -5.24989 | GAAGTTAAGTTGCAT GGTG TTT CTCC TTTTTTAGTGTGTGA Patl_0364 420064 - 419849 - | hypothetical protein TERM 438 420065 - 420075 + r 73 -2.4 -5.27399 | GAAGTTAAGTTGCAT GGTG TTT CTCC TTTTTTAGTGTGTTA Patl_0365 420306 - 420091 - | hypothetical protein TERM 439 420307 - 420317 + r 73 -2.4 -5.24989 | GAAGTTAAGTTGCAT GGTG TTT CTCC TTTTTTAGTGTGTGA Patl_0366 420548 - 420333 - | hypothetical protein TERM 440 420549 - 420559 + r 73 -2.4 -5.24989 | GAAGTTAAGTTGCAT GGTG TTT CTCC TTTTTTAGTGTGTGA Patl_0367 420790 - 420575 - | hypothetical protein Patl_0368 422156 - 420897 - | hypothetical protein Patl_0369 422332 - 423621 + | hypothetical protein TERM 441 423890 - 423900 + G 77 -6.8 -4.45168 | GTATTATTGTTCGCA GAGC AAG GCTC TTTGTATTTTGGGCG TERM 442 424328 - 424347 + G 71 -7.8 -3.88884 | overlap 424325 424326 ACAGTCAGTGCTTGG CCTACCGC CATT GCGTTAGG TATTTATTTCATTGG Patl_0370 423632 - 424531 + | hypothetical protein TERM 443 424587 - 424615 + F 100 -16.1 -3.09273 | opp_overlap 424590, overlap 424590 GTATTTTTTACGGCA CAACTGTCACCTG CTA CTGGTGACAGTTG TCTGTGTTGCCACGC TERM 444 424612 - 424590 - f 86 -12 -3.32844 | opp_overlap 424587 424590 TTTTTTACGGCACAA CTGTCACCTG CTA CTGGTGACAG TTGTCTGTGTTGCCA TERM 445 424590 - 424612 + F 89 -12 -3.68962 | opp_overlap 424590, overlap 424587 TTTTTTACGGCACAA CTGTCACCTG CTA CTGGTGACAG TTGTCTGTGTTGCCA Patl_0371 424816 - 425034 + | hypothetical protein Patl_0372 425166 - 425966 + | hypothetical protein Patl_0373 426068 - 426940 + | heat shock protein HtpX Patl_0374 427623 - 426937 - | putative cyclase Patl_0375 427750 - 428931 + | HI0933-like protein TERM 446 429678 - 429668 - f 85 -4 -5.57396 | opp_overlap 429668 AGAATGAATAAAAAA TTGA TCT TCAA CTTAATAATAAAATC TERM 447 430134 - 430116 - g 72 -8.8 -3.53444 | opp_overlap 430116 430115 430113, overlap 430117 TTACGTTGGGCGAAA TTCAGCGG CTG CCGCTGAC GTATTTGATGTAGAC TERM 448 430133 - 430117 - g 78 -12.3 -2.71924 | opp_overlap 430116 430115 430113, overlap 430116 TACGTTGGGCGAAAT TCAGCGG CTG CCGCTGA CGTATTTGATGTAGA Patl_0377 429709 - 432060 + | TonB-dependent receptor TERM 449 432234 - 432286 + G 73 -10 -3.34089 | gap 1, opp_overlap 432244, overlap 432237 432243 432244 432246 TGTAGGGCAGCTACC TGCAGTAAAACGCTCACCTATGAGT TTTT ACTCATTGGTG-GCGATTTACATCA TATTAATTCTTGCCC TERM 450 432237 - 432283 + G 72 -10.3 -2.83228 | gap 1, opp_overlap 432244, overlap 432234 432243 432244 432246 AGGGCAGCTACCTGC AGTAAAACGCTCACCTATGAGT TTTT ACTCATTGGTG-GCGATTTACA TCATATTAATTCTTG TERM 451 432276 - 432244 - g 91 -11.4 -4.26076 | gap 1, opp_overlap 432243 432237 432234 432244 432246 CTACCTGCAGTAAAA CGCTCACCTATGAGT TTTT ACTCATTGGTG-GCG ATTTACATCATATTA TERM 452 432244 - 432276 + G 74 -11.4 -2.82482 | gap 1, opp_overlap 432244, overlap 432243 432237 432234 432246 CTACCTGCAGTAAAA CGCTCACCTATGAGT TTTT ACTCATTGGTG-GCG ATTTACATCATATTA TERM 453 432246 - 432257 + G 73 -4.4 -4.81685 | opp_overlap 432244, overlap 432244 432243 432237 432234 ACCTGCAGTAAAACG CTCA CCTA TGAG TTTTTACTCATTGGT TERM 454 432297 - 432309 + G 70 -9.1 -3.44319 | CATCATATTAATTCT TGCCC CAT GGGCA TTGTCGTACATTGAG Patl_0378 432193 - 433590 + | oxidoreductase FAD/NAD(P)-binding TERM 455 433785 - 433805 + G 82 -6.8 -4.77165 | gap 1, opp_overlap 433774 AGCAGGGGCATATAC GGCAGCGGC CTTA GCTGC-GCC TTTTATTGTCAACAC Patl_0379 433657 - 435582 + | twin-arginine translocation pathway signal TERM 456 435665 - 435654 - g 75 -3 -5.15969 | TGCCAATTGAAAAAA TACA TGGC TGTA TAGGGTGTGAAAAGT Patl_0380 435638 - 435853 + | 4Fe-4S ferredoxin, iron-sulfur binding Patl_0381 435956 - 436861 + | IclR family transcriptional regulator TERM 457 437066 - 437078 + G 80 -6.9 -4.564 | opp_overlap 437065 437066, overlap 437067 CCAACTGACCACAAC TGCCC TTG GGGCG TTTTCGTTTACCATT Patl_0382 436875 - 438056 + | hypothetical protein TERM 458 438826 - 438814 - g 71 -6.9 -4.11216 | overlap 438815 CTTTTATGGCCAAAA CCCCG TAT CGGGA AAATGGTAAAGCAGT Patl_0383 438300 - 439991 + | sulfatase Patl_0384 440605 - 441546 + | hypothetical protein Patl_0385 441601 - 442029 + | thioesterase superfamily protein TERM 459 442083 - 442061 - T 100 -17.8 -3.6682 | TTGTACTGATTTAAA CAGCGACAGG ATC CCTGTCGCTG TGACGTCAGAAAGAA Patl_0386 442671 - 442111 - | porin family outer membrane protein TERM 460 442601 - 442577 - G 70 -9.3 -3.30159 | TCAATCTTTGCATAA CCGCCTTCAAC ATA GTTGAAGTCAG GAGAGGCTGCGTAAG Patl_0387 442956 - 443183 + | hypothetical protein TERM 461 443244 - 443215 - T 100 -18 -3.89614 | opp_overlap 443215, overlap 443235 GTTAAGTTGTACAAA CGCTCAGCGATG AAAACA CATCGCTGAGCG TTTTTTTATCATCTT TERM 462 443215 - 443244 + T 100 -18 -5.70829 | opp_overlap 443215 443235 GTTAAGTTGTACAAA CGCTCAGCGATG AAAACA CATCGCTGAGCG TTTTTTTATCATCTT Patl_0388 444002 - 443295 - | hypothetical protein Patl_0389 444125 - 444964 + | sterol desaturase Patl_0390 445591 - 444971 - | CDP-alcohol phosphatidyltransferase Patl_0391 446331 - 445651 - | ABC transporter related TERM 463 446292 - 446302 + g 72 -5.4 -4.43877 | GCAAGGAAATCTGCC CACT AAC AGTG TTTATTTGGCAATTA Patl_0392 447964 - 446315 - | ABC transporter, permease protein, putative TERM 464 447508 - 447497 - G 86 -4.4 -5.4659 | opp_overlap 447497 GAATATAAATAAAAA GAAG GGCA CTTC TTTTATGCTGATAGC Patl_0393 449061 - 447940 - | hypothetical protein TERM 465 448672 - 448657 - G 71 -7.6 -3.85539 | CATAGGGACACCAAA GTCGTT GCCC AACGAC AGCTGCTCAGTAGCC TERM 466 448960 - 449000 + g 75 -9.7 -3.53444 | overlap 448992 AAAGTACACTGTTTC GCCGCGGGCAGTGGC TAAGGTTTGCT GCCACTGCTTGCTGC TTTCGCGCGGGCTAG Patl_0394 450022 - 449144 - | hypothetical protein TERM 467 449972 - 449951 - G 77 -10.9 -3.19339 | overlap 449949 449948 449956 CACGAACGAAAATGA GGCAAGTAG CAAA CTACCTGCC GTTAGGGTATATCGA Patl_0395 452259 - 450118 - | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 468 452223 - 452206 - G 85 -3.4 -5.56264 | gap 1 GTCAAAGACAAAAAA GCTGGCG ATGAG CGC-AGC AATGACGATGACTAA Patl_0396 454680 - 452281 - | TonB-dependent receptor TERM 469 455042 - 455060 + G 79 -4.5 -5.09895 | opp_overlap 455042 455043, overlap 455043 455056 TAGTGGATAAAGACA GCCGCTA CTATC TAGCGGG TTTTTTAAATGCCTG TERM 470 455655 - 455644 - g 82 -5.8 -5.20735 | GTAATAAAAAACAAA GGCT TGTT AGCC CCAAAAACGAAAGTA Patl_0397 455020 - 456267 + | major facilitator transporter Patl_0398 457240 - 456257 - | diguanylate cyclase with PAS/PAC sensor TERM 471 457441 - 457458 + H 79 -11.3 -2.53112 | opp_overlap 457441, overlap 457440 CCCGTCATACAAAAA CGCGCTA TAAA TAGCGCG CTTAATCAATTGACT TERM 472 457458 - 457441 - H 95 -11.3 -4.96848 | opp_overlap 457441 457440 CCCGTCATACAAAAA CGCGCTA TAAA TAGCGCG CTTAATCAATTGACT TERM 473 460878 - 460918 + H 100 -12.1 -5.02074 | opp_overlap 460872 460877 AGTAGAAAAGATTAG CCTTAATCAATGTGTACTG ATT CAGTATTTATTGATTAGGG TTTTTTAAACCCTAC TERM 474 461618 - 461606 - H 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 475 462413 - 462395 - H 79 -10.3 -3.54743 | overlap 462408 CATGAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 476 462916 - 462905 - H 72 -4.4 -4.7254 | overlap 462907 ACTGTTTATTAAAAA CACA GCAC TGTG CTAAATCGAAAGATG TERM 477 464097 - 464083 - H 73 -10 -2.75294 | overlap 464082 CTAAATGGCTTAAAC GGAAGG AAA CCTTCC TGACCATTTACCTAC TERM 478 464417 - 464435 + H 93 -8.1 -5.42514 | opp_overlap 464417, overlap 464410 CCCATTTAGAATGAA GCCACCT ATATC GGGTGGC TTTTTTCGTTTCTGC TERM 479 464580 - 464599 + H 83 -9.2 -4.09685 | opp_overlap 464571 464572 TTCAAACGGCTGGAG CGGTGCTC CAGA GAGCCCCG TTTTCACCCATCAAG TERM 480 464680 - 464644 - H 73 -8.8 -3.72576 | gap 1, opp_overlap 464678 GTGCTTTGCATGAAA GCTGATGAACAAC-CCA TCCC TGGTGTTGCGCACCAGC CACGCCATCCATGGC TERM 481 464681 - 464698 + H 80 -11.3 -2.75064 | overlap 464678 464683 GTGTTGCGCACCAGC CACGCCA TCCA TGGCGTG TCGTTCAGTCGGGCA TERM 482 464791 - 464809 + H 93 -8.1 -5.42514 | opp_overlap 464791, overlap 464784 CCCATTTAGAATGAA GCCACCT TAATC GGGTGGC TTTTTTCGTTTCTGC TERM 483 467416 - 467430 + G 75 -6.4 -4.42386 | CGATGAGCAACTCGA TCAGGC CAT GCTTGA TTTTATCCGTGGCGA Patl_0399 465515 - 467716 + | hypothetical protein Patl_0400 468995 - 467916 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 484 468251 - 468228 - G 78 -6.6 -4.57073 | CACGTCGGGCAAAAA GGAAGGCTCA ACCC TGGGCCTGCC AATGCCCTCAATGCG TERM 485 468817 - 468804 - G 76 -4.5 -5.00642 | opp_overlap 468812 CAAGCCATATAAAAA TAGCG AACG CGCCA AGCGATGTTTAAGGC TERM 486 469188 - 469151 - R 89 -12.2 -3.62291 | gap 2, opp_overlap 469151 469182, overlap 469149 469182 TCAAGATCACAAATA CCGTGCTGCTTTTGCCTC AGTT AAGGCAAAAGC-GC-CGG GTGCTCTTTATGGAT TERM 487 469390 - 469407 + r 84 -6.9 -4.87318 | overlap 469391 AGTTTGGATACATTG ACGCCCT AAGT AGGGCGG TTTTTGAATTTTGGG TERM 488 469391 - 469406 + r 79 -10.4 -3.51307 | overlap 469390 GTTTGGATACATTGA CGCCCT AAGT AGGGCG GTTTTTGAATTTTGG Patl_0401 469790 - 469395 - | hypothetical protein Patl_0402 473198 - 469824 - | transcriptional regulator, CadC TERM 489 471602 - 471614 + g 83 -9.1 -4.25104 | CGTTTATCCAGTTGC TGGCC CTT GGCCA TTTTCGTAACAGGGC TERM 490 471861 - 471875 + g 73 -2.1 -5.1287 | TTTTGAAAGTTGAAG GTAGA TCTGT TCTGC TTTTTTACCTATGGC TERM 491 472054 - 472101 + g 74 -11.4 -2.79327 | gap 1, overlap 472053 472056 GGGTTAGTGCTGTTC GGTTCGTTTGTCCAGCTTAGGTT TGC AGCCTTAGC-GGGCAAGCGGATC ATTTGACTGAGCTCA TERM 492 472056 - 472099 + g 73 -10.4 -2.94322 | gap 1, overlap 472054 472053 GTTAGTGCTGTTCGG TTCGTTTGTCCAGCTTAGGTT TGC AGCCTTAGC-GGGCAAGCGGA TCATTTGACTGAGCT TERM 493 473434 - 473376 - R 79 -9.89999 -3.72576 | gap 1, opp_overlap 473392 473398, overlap 473378 473389 473399 GTCGCGTTGATGAAA TATTAAGAGCAGAGACGAAAAAAGCGCC TTAA GGCGCCTTTTTCTTCT-TACTATTAATG GGTTAGCTATTCTTT TERM 494 473432 - 473378 - R 90 -12.5 -3.44848 | gap 1, opp_overlap 473392 473398, overlap 473376 473389 473399 CGCGTTGATGAAATA TTAAGAGCAGAGACGAAAAAAGCGCC TTAA GGCGCCTTTTTCTTCT-TACTATTAA TGGGTTAGCTATTCT TERM 495 473422 - 473389 - R 100 -14.7 -2.94464 | opp_overlap 473392 473398, overlap 473378 473376 473399 AATATTAAGAGCAGA GACGAAAAAAGCGCC TTAA GGCGCCTTTTTCTTC TTACTATTAATGGGT TERM 496 473392 - 473419 + r 93 -12.8 -3.83155 | opp_overlap 473389 473378 473376 473399, overlap 473398 ATTAAGAGCAGAGAC GAAAAAAGCGCC TTAA GGCGCCTTTTTC TTCTTACTATTAATG TERM 497 473398 - 473413 + r 87 -6 -5.31855 | opp_overlap 473389 473378 473376 473399, overlap 473392 AGCAGAGACGAAAAA AGCGCC TTAA GGCGCC TTTTTCTTCTTACTA TERM 498 473412 - 473399 - R 100 -9.5 -5.24989 | opp_overlap 473398 473392, overlap 473389 473378 473376 GCAGAGACGAAAAAA GCGCC TTAA GGCGC CTTTTTCTTCTTACT Patl_0403 476646 - 473437 - | acriflavin resistance protein TERM 499 474395 - 474374 - G 80 -7.3 -4.63527 | gap 1, overlap 474375 TCACCACCGTAAAAA CTG-GCGCCA ACT TGGCGCGCAA TGTCGGCTAGGTTTA TERM 500 475220 - 475210 - G 78 -5.4 -4.88736 | overlap 475212 GATTACGTAGAAAAA CTGA CCT TCAG GGCCGGTGGAAAACA TERM 501 475550 - 475530 - G 78 -6.2 -4.68103 | gap 1 TGAATCGCAAGAAAA TGGTGAGCA TAAT TGC-CACCA AAATAGCACCCTGAA Patl_0404 477818 - 476655 - | RND family efflux transporter MFP subunit TERM 502 477574 - 477561 - G 74 -8.1 -3.86897 | CCCACCGGCGACAAA GCTGG GGTG CCAGC TAATCACTTCGCCTG TERM 503 479096 - 479084 - g 77 -6.9 -4.49556 | opp_overlap 479084 479082 479085, overlap 479085 TTGGTACTAAACAAA CCGCC GAT GGCGA TATTATTTATAATGG Patl_0405 478069 - 479721 + | peptidase M28 Patl_0406 479793 - 480335 + | hypothetical protein TERM 504 480430 - 480412 - f 74 -6 -4.3208 | CGTGATAACTTAAAA TCGATGAA CGA TTCAGCGA TTCAAATCGGCTTAC Patl_0407 480642 - 480914 + | hypothetical protein TERM 505 481649 - 481635 - g 93 -10 -4.67234 | opp_overlap 481635 481634 481637 ACGCAATTTTAAAAA CACCTG AGC CAGGTG ATTTTAGAGTACAAG TERM 506 481635 - 481649 + G 70 -10 -3.08046 | opp_overlap 481635, overlap 481634 481637 ACGCAATTTTAAAAA CACCTG AGC CAGGTG ATTTTAGAGTACAAG Patl_0408 481037 - 481906 + | hypothetical protein Patl_0409 482434 - 481967 - | AsnC family transcriptional regulator Patl_0410 482576 - 483394 + | tryptophan 2 3-dioxygenase (vermilion)-like TERM 507 483699 - 483684 - g 70 -2.4 -5.08824 | overlap 483685 CGTTCAGTTAAAAAA CGCCGG TAAA CCCGCA ACCCACAAGCGCACA Patl_0411 483463 - 484536 + | aminotransferase, class V Patl_0412 485233 - 484604 - | HAD family hydrolase Patl_0413 485568 - 485984 + | hypothetical protein TERM 508 486091 - 486063 - f 85 -2.5 -5.86965 | gap 1, opp_overlap 486063 486058 AGTCAGTAAAAAAAA GCCGAT-AGTGT CACTTC AAACTCATCGGC TTTTGCGTTTTTATA TERM 509 486157 - 486139 - f 71 -4 -4.85822 | ATCATAAATATAAAA TATTCAAT GTT ATTAAATA GTTGCCATGATCGGT TERM 510 488568 - 488582 + G 71 -7 -4.09685 | overlap 488567 AACCCAACTTTTGTC GCGGGG GCC CCACGC TTTTACGGCATCGAG Patl_0414 486270 - 488621 + | TonB-dependent receptor TERM 511 488688 - 488716 + F 100 -13.2 -4.72272 | AATTGAAAGCCTGTA CCCCGTTTCAGC ACGTC GCTAAAACGGGG TTTTTAGTAAAGGGA Patl_0415 488828 - 489574 + | oxidoreductase FAD/NAD(P)-binding TERM 512 490057 - 490035 - g 73 -7.6 -4.15222 | opp_overlap 490034 490033 490031 490027 AGTGTGCTGAATAAA TCGGCGAGTG TCA CGGTCGCCGA GCTTATTCCTGATGT Patl_0416 489774 - 490454 + | hypothetical protein Patl_0417 491880 - 490492 - | uroporphyrin-III C-methyltransferase TERM 513 490724 - 490707 - G 74 -8.5 -3.86346 | overlap 490710 TGAGTTTCTCACAAA TAACAGG CAAG CCTGTTA ACCCCATATAGAATA TERM 514 490756 - 490774 + g 76 -8.8 -3.79043 | AGTGGTTTGTTCAGG CTGGGCCA GCA TGGGCCAG TTTAAGTTGATGCTG TERM 515 492051 - 492037 - R 100 -11.4 -5.65177 | opp_overlap 492037 ATAGGCATAAAAAAA GAGGCC ACT GGCCTC TTCTTATATTGTTAG TERM 516 492037 - 492051 + r 90 -11.4 -4.03767 | opp_overlap 492037 ATAGGCATAAAAAAA GAGGCC ACT GGCCTC TTCTTATATTGTTAG Patl_0418 493863 - 492124 - | DEAD/DEAH box helicase-like TERM 517 494445 - 494429 - g 73 -2.3 -5.10601 | overlap 494430 ATAAAATGAGAAAAA CGATAAT CGC ACTATCA CTAGGGATGTTGATC Patl_0419 494407 - 497160 + | TPR repeat-containing protein TERM 518 497222 - 497197 - T 100 -12.6 -6.41805 | opp_overlap 497197 TTACTAAAAAAAAAA GCCCGTAACG GAAACA CGTCACGGGC TTTTTTATAGCGCTA TERM 519 497197 - 497222 + T 100 -10.4 -5.252 | opp_overlap 497197 TTACTAAAAAAAAAA GCCCGTAACG GAAACA CGTCACGGGC TTTTTTATAGCGCTA Patl_0420 497686 - 497258 - | thioredoxin Patl_0421 498535 - 497687 - | Ion transport protein TERM 520 498495 - 498475 - G 78 -4.7 -5.04325 | opp_overlap 498486, overlap 498476 498477 CCGAAATCACAAAAA TCTCGAACA GCT TGTTCGAAC GAATACGAATAAATT Patl_0422 498909 - 499550 + | heme oxygenase TERM 521 500257 - 500291 + G 74 -10.8 -3.21593 | opp_overlap 500261, overlap 500254 CGTTAAAAACCCCAT TAGACTGCTTGCTGAT GTT AACGCCAAGCAGTCTA TGTTGTACCCAAATG Patl_0423 499547 - 501946 + | multi-sensor signal transduction histidine kinase Patl_0424 502155 - 502607 + | response regulator receiver protein TERM 522 502620 - 502646 + F 70 -8.1 -3.76169 | gap 1, opp_overlap 502622 TAAATCCATGTTACA TATGCCTG-GTG CACG CGCTCAGGCATA TTCTATTGCTGTTCA Patl_0425 502924 - 504084 + | iron-containing alcohol dehydrogenase Patl_0426 504223 - 504690 + | thioesterase superfamily protein Patl_0427 505974 - 504787 - | hydroxymethylglutaryl-CoA reductase (NADPH) Patl_0428 506454 - 506131 - | 4Fe-4S ferredoxin, iron-sulfur binding TERM 523 507041 - 507027 - g 75 -10 -3.60296 | opp_overlap 507027 TATTGTTAGCGCAAA TGGGCT TTA AGCCCA TTATTTTAGAGCGCG TERM 524 507027 - 507041 + G 83 -10 -4.17048 | opp_overlap 507027 TATTGTTAGCGCAAA TGGGCT TTA AGCCCA TTATTTTAGAGCGCG Patl_0429 506675 - 508288 + | FAD dependent oxidoreductase TERM 525 508334 - 508300 - T 89 -11.7 -3.52204 | gap 1, opp_overlap 508310, overlap 508310 GTAGCGTTAAACGAA CACA-AAAAAAGCAGC CTGA GCTGCTTTTTTATGCG AAGTGCAATGTAAAC TERM 526 508310 - 508323 + T 91 -8.1 -5.24531 | opp_overlap 508300 508310 ACGAACACAAAAAAA GCAGC CTGA GCTGC TTTTTTATGCGAAGT TERM 527 508323 - 508310 - T 100 -8.1 -5.82172 | opp_overlap 508310, overlap 508300 ACGAACACAAAAAAA GCAGC CTGA GCTGC TTTTTTATGCGAAGT Patl_0430 509669 - 508359 - | TolC family type I secretion outer membrane protein TERM 528 508965 - 508975 + g 80 -6.8 -4.58663 | TAATTCCAAATTTCG CTGC TCA GCAG TTTTTAGCCAATCGT Patl_0431 509893 - 510513 + | nucleoside diphosphate pyrophosphatase Patl_0432 510497 - 510952 + | hypothetical protein Patl_0433 510968 - 511720 + | metallophosphoesterase TERM 529 512107 - 512089 - g 78 -6 -4.75472 | CTTATACTAAGAAAA GATTCAGC TTA GATGAATC CCATACCCAAGATTT Patl_0434 511731 - 512324 + | hypothetical protein Patl_0435 512409 - 514298 + | DNA topoisomerase IV subunit B TERM 530 514540 - 514516 - g 72 -6.4 -4.21744 | gap 1, overlap 514518 ATTGAACAAATCAAA CAGAGCGTGAG AGAT CGCACGCTC-G ACCAGCAAATCCCTC TERM 531 514539 - 514518 - g 79 -10.1 -3.69681 | overlap 514516 TGAACAAATCAAACA GAGCGTGAG AGAT CGCACGCTC GACCAGCAAATCCCT TERM 532 514570 - 514586 + G 72 -2.9 -5.00616 | CTCACTGAGAATCAA CTCAACA GCT TGGTGGG TTTTTTACAACGCGC Patl_0436 514351 - 515640 + | hypothetical protein Patl_0437 516004 - 515663 - | small multidrug resistance protein Patl_0438 516334 - 516023 - | hypothetical protein TERM 533 516094 - 516104 + g 80 -5.4 -4.97957 | overlap 516089 TTTTTACTACCTTTG GCAA AGC TTGC TTTTGTTCTTCTGTG TERM 534 516397 - 516414 + G 74 -6.9 -4.25074 | opp_overlap 516391 516397 CGATAATGACGAAGA GCGGGCG ATTC TGCCTGC TTTTCAACTTTGCTA Patl_0439 516387 - 516638 + | hypothetical protein Patl_0440 517664 - 516639 - | lysine 2,3-aminomutase YodO family protein TERM 535 518161 - 518195 + G 72 -6.4 -4.24342 | opp_overlap 518171, overlap 518150 ACCGGCGGCAAACCC GCTACATTAACCACTG GCG CAGTGGTACGTGTACC TTTATTCGTACAAAC TERM 536 518185 - 518171 - g 71 -10 -3.26319 | opp_overlap 518161 AACCCGCTACATTAA CCACTG GCG CAGTGG TACGTGTACCTTTAT Patl_0441 517702 - 518271 + | translation elongation factor P TERM 537 518309 - 518292 - f 73 -7 -4.29738 | opp_overlap 518292 TGATATCGATGAAAA GCTCAC GTTCAT GTGAGC TTTTTTTATGCCTGC TERM 538 518292 - 518309 + F 100 -7.7 -5.64274 | opp_overlap 518292 TGATATCGATGAAAA GCTCACG TTCA TGTGAGC TTTTTTTATGCCTGC Patl_0442 518341 - 519324 + | lysyl-tRNA synthetase-related protein GenX Patl_0443 519409 - 520545 + | diguanylate cyclase Patl_0444 520668 - 521117 + | hypothetical protein Patl_0445 521125 - 521655 + | GCN5-related N-acetyltransferase Patl_0446 522237 - 521641 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type Patl_0447 523405 - 522251 - | rRNA (guanine-N(2)-)-methyltransferase TERM 539 522318 - 522281 - G 90 -13.7 -3.30972 | gap 1, opp_overlap 522277 522276, overlap 522276 TGACAAAATACTGAA TTTTCGGTCACTTGCAAG TAC CTTGTA-GTGACCGAAAA GGCGCTTAATCGTTT TERM 540 524006 - 523996 - g 71 -6.8 -4.19258 | ACAGCTTAGCTAAAA CGAC AAA GTCG CTGGCACCACGTATT Patl_0448 523431 - 524063 + | 2OG-Fe(II) oxygenase Patl_0449 524109 - 524423 + | BolA-like protein Patl_0450 524521 - 524691 + | hypothetical protein TERM 541 524719 - 524747 + F 76 -8.9 -3.63627 | TATCGGTGTTCGATC TGCTCAGAGTTGT TTA ATTACTCTGGGCA TTTACAATGTACGCC TERM 542 525102 - 525090 - g 72 -6.2 -4.3665 | GAAGCGAAAGAGAAA GGGC TTTTT GCCC AAACCATAAACGGCG Patl_0451 524787 - 525968 + | trans-2-enoyl-CoA reductase TERM 543 525985 - 526018 + F 77 -10.6 -2.87931 | gap 1, opp_overlap 525994, overlap 525994 CGTCTACTATATTGG TATAAAAAACCGCCT CAATA AGGCGGTTTTTT-TA TGTCTAGGAAATAGA TERM 544 525994 - 526010 + F 100 -9.4 -5.76633 | opp_overlap 525994, overlap 525985 TATTGGTATAAAAAA CCGCCT CAATA AGGCGG TTTTTTTATGTCTAG TERM 545 526010 - 525994 - f 100 -10.1 -5.252 | opp_overlap 525994 525985 TATTGGTATAAAAAA CCGCCTC AAT AAGGCGG TTTTTTTATGTCTAG TERM 546 526160 - 526145 - f 83 -3.2 -5.62219 | opp_overlap 526146, overlap 526146 AATACACTAAAAAAA TTGTGC TTAA GCACAT TTGGCATGGCAGAAC TERM 547 527379 - 527369 - g 72 -8.2 -3.75766 | opp_overlap 527369 527372 TTTACAAGGTAATAA CGCC CAT GGCG TTCATGGTTATGTGG Patl_0452 526413 - 527786 + | Na(+)-translocating NADH-quinone reductase subunit A TERM 548 527939 - 527916 - g 72 -6.6 -4.29326 | GGTAAAGTTAACAAA GCTGGCACTC ACGT GCGTGACAGC ATCGACTTAAAACGT Patl_0453 527790 - 529001 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 549 529171 - 529144 - g 77 -10.7 -3.37028 | gap 1, overlap 529136 ACTAATATCTTAGAA TCTG-CCGGCTT ACTTG AAGCCGGGCAGA GTAAAGAGCAAATCG TERM 550 529322 - 529301 - g 83 -9.5 -4.16842 | GTGACCCTGAAGAAA GTATCAAGC CTGT GCCTGATAC CGCTGGGATTTTACG Patl_0454 528991 - 529752 + | Na(+)-translocating NADH-quinone reductase subunit C Patl_0455 529764 - 530396 + | Na(+)-translocating NADH-quinone reductase subunit D TERM 551 530639 - 530649 + G 78 -5.4 -4.83759 | overlap 530635 CTGACACCGATTTGA GCTT CTT AAGC TTTTTGACTTTCATT Patl_0456 530401 - 531009 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 552 532246 - 532233 - g 70 -5.3 -4.4261 | TGTTGAAGATGAAAA CATCA TGCT TGATG ACTTCGGTGGTTAAT Patl_0457 531034 - 532260 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 553 532326 - 532313 - f 75 -8.1 -4.00587 | opp_overlap 532313 AACACATGTAAATAA GGGAC TTCG GTCCC TTTTTTTATTTAGGT TERM 554 532313 - 532326 + F 100 -8.1 -5.96894 | opp_overlap 532313 AACACATGTAAATAA GGGAC TTCG GTCCC TTTTTTTATTTAGGT TERM 555 532584 - 532554 - g 79 -9.1 -4.06055 | ATTGGTGAAAGTAAA TGAATTGATGTCG ACTTA CGACGCCAATTCA GAACTGTCACGATTC Patl_0458 532348 - 533373 + | ApbE-like lipoprotein TERM 556 533589 - 533573 - g 76 -4.3 -5.0538 | overlap 533574 TGTGATCGCAAAAAA GCCCGCT TAG AGCGAGA AGAAGCGCGTCAAGC Patl_0459 533408 - 533641 + | hypothetical protein TERM 557 534268 - 534284 + G 70 -10.1 -3.02511 | GTGAAAACATTGGCA CTGGGGA AAA TCCCCGG TGTTGGCAAAGTCAC Patl_0460 533737 - 534807 + | DNA-directed DNA polymerase Patl_0461 534913 - 535146 + | hypothetical protein TERM 558 536084 - 536073 - g 74 -5.8 -4.69053 | CATCACTGAAGAAAA GTGG ATCA CCAC ACTCTATAACGGCCA Patl_0462 535225 - 536103 + | beta-lactamase-like TERM 559 536118 - 536142 + T 70 -8.5 -3.273 | overlap 536116 GTCGCTATGGATAGG CCTCTGGCGGT GCA AGCGTCGGAGG TATTGGCTTTTATGC TERM 560 536214 - 536226 + T 75 -7.7 -4.07568 | opp_overlap 536224 CTTAGTCATTCAGGG CGCTA TCA TAGCG TTTTACACCACCAAC Patl_0463 537858 - 536200 - | amidohydrolase 3 TERM 561 536435 - 536455 + g 95 -13.3 -4.33674 | opp_overlap 536438 GCTTCTTCTTTAATC CAACCGGCC TCA GGCTGGTTG TTTCTATTCTGTCTT TERM 562 538015 - 537990 - R 100 -15.5 -5.4251 | TGTAGATACAAAAAA GCCCCGCTTGT TTTC ACAAGCAGGGC CTTAAGCTTACCGGT Patl_0464 540127 - 538040 - | elongation factor G TERM 563 540178 - 540192 + r 78 -4.2 -5.26119 | ATTATACAAGATATT TCCGCA GGA TGCCGA TTTTCTTTTTAGAAA Patl_0465 541423 - 540401 - | diguanylate cyclase TERM 564 541552 - 541524 - R 100 -9 -5.66989 | opp_overlap 541524 GAAAGAGTAAAAAAA GACAGTGATTTA GGAGA TAAACCACCGTC TTATCCGTGCATAGG Patl_0466 544911 - 541570 - | amidohydrolase TERM 565 543438 - 543461 + g 72 -3.1 -4.95547 | gap 1 GTTCCACAGAGTATT CTGG-GGCCA ATAAA TAGCCGCCAG TTTTCTTATTGTAGG Patl_0467 547276 - 545066 - | putative GAF sensor protein TERM 566 545658 - 545646 - G 83 -6.2 -5.00616 | TCTGCCCGTAAAAAA GCGC GTAGG GCGC TGGCAAAGGTAAATC TERM 567 546136 - 546161 + g 74 -3.9 -4.99638 | GGCACACTCCGTCAA TGCGCATACGA ACTC TTGTTGGCGCA TTTTTCTCTGCATCT Patl_0468 547635 - 547946 + | ribosomal protein S10 Patl_0469 547965 - 548603 + | ribosomal protein L3 rplD 548622 - 549227 + | 50S ribosomal protein L4 TERM 568 549291 - 549281 - g 74 -5.4 -4.57073 | CATGTTTCTGAAAAA GCAA CGC TTGC AGCTGAAGTTAACAA rplW 549224 - 549526 + | 50S ribosomal protein L23 TERM 569 550169 - 550202 + G 76 -11.7 -2.75074 | gap 1, opp_overlap 550177 550198, overlap 550166 550173 TTGGTAAAGCCGGTG CGAACAGATGGCGCGG TAT CCGC-CCAACAGTTCG TGGTGTTGCCATGAA rplB 549541 - 550365 + | 50S ribosomal protein L2 Patl_0473 550381 - 550656 + | ribosomal protein S19 rplV 550667 - 550999 + | 50S ribosomal protein L22 rpsC 551009 - 551707 + | 30S ribosomal protein S3 rplP 551710 - 552120 + | 50S ribosomal protein L16 Patl_0477 552120 - 552311 + | ribosomal protein L29 Patl_0478 552311 - 552562 + | ribosomal protein S17 TERM 570 552609 - 552586 - T 100 -13.8 -4.3487 | opp_overlap 552586 AGATACAATTTAAAA GGCGCGCCTC GTAA GAGTCGCGCC TTTTTTGTTTCTGTG TERM 571 552586 - 552609 + T 100 -13.8 -5.76237 | opp_overlap 552586 AGATACAATTTAAAA GGCGCGCCTC GTAA GAGTCGCGCC TTTTTTGTTTCTGTG Patl_0479 554080 - 552665 - | peptidase S41 Patl_0480 554597 - 555778 + | diguanylate cyclase Patl_0481 555911 - 557407 + | catalase TERM 572 557512 - 557527 + T 91 -8.2 -5.2197 | opp_overlap 557512 CGGATTGGTACAAAA GGTCGC ATTA GCGGCC TTTTTAGTTTTTATA TERM 573 557527 - 557512 - T 74 -6 -4.38712 | opp_overlap 557512 CGGATTGGTACAAAA GGTCGC ATTA GCGGCC TTTTTAGTTTTTATA Patl_0482 558083 - 557538 - | paraquat-inducible protein A TERM 574 557648 - 557634 - G 83 -4.2 -5.32599 | GACAAAATAGAAAAA GCCG TCTCCCG CGGC TGATAGGGTTTGGGT Patl_0483 558566 - 558138 - | hypothetical protein Patl_0484 559836 - 558568 - | hypothetical protein Patl_0485 560064 - 560690 + | hypothetical protein Patl_0486 561587 - 560733 - | formyltetrahydrofolate deformylase Patl_0487 562221 - 561691 - | 2'-5' RNA ligase TERM 575 563439 - 563460 + G 79 -9.5 -3.7732 | overlap 563431 GCCTGCGTTTGGGGG GCGCAAATT TCTG AGTTTGCGC TTATTGATATGCCAA TERM 576 564181 - 564154 - g 82 -7.7 -4.63218 | TTGTGCTTAAGAAAA TGCCCAGCGCT AAGCCG AGCGTTGAGCA AATAACTGCTTTATG Patl_0488 562332 - 564803 + | ATP-dependent helicase HrpB TERM 577 564821 - 564835 + F 74 -4.2 -5.1523 | TGCTAGGATATGCGC GAGCGA ACC TCCCTC TTTTTCTCTTATCCA TERM 578 565663 - 565638 - g 74 -10.7 -3.18383 | ACTTTGACCCAGCAA TTGGTTAAAAA TCTG TTTTTAACCAA TGAAAAGTCACTGGT Patl_0489 564933 - 567278 + | penicillin-binding protein 1B Patl_0490 568161 - 567295 - | hypothetical protein Patl_0491 568597 - 568935 + | nitrogen regulatory protein P-II TERM 579 569123 - 569105 - g 73 -4.5 -4.76644 | opp_overlap 569107, overlap 569107 AATACTCACTAAAAA TATCGCG CTTTT CGCGATT TCTTGTCTTATGTAC TERM 580 569107 - 569121 + G 77 -7.1 -4.50257 | opp_overlap 569107 569105 TACTCACTAAAAATA TCGCG CTTTT CGCGA TTTCTTGTCTTATGT TERM 581 569750 - 569738 - g 76 -7.7 -4.32857 | overlap 569740 GTTCTTAAACACAAA TGCTG CAG CAGCA GGTGGCGCAGTAGCG Patl_0492 568956 - 570224 + | Rh-like protein/ammonium transporter TERM 582 570346 - 570318 - f 100 -14.7 -4.72846 | opp_overlap 570324, overlap 570324 GGATATATGCAAAAA TAAAAAGCCTCGC TCA GCGAGGCTTTTTT GTTTATACCAACACT TERM 583 570340 - 570324 - f 100 -13.7 -5.63236 | opp_overlap 570324, overlap 570318 ATGCAAAAATAAAAA GCCTCGC TCA GCGAGGC TTTTTTGTTTATACC TERM 584 570324 - 570340 + F 100 -13.7 -5.72622 | opp_overlap 570324 570318 ATGCAAAAATAAAAA GCCTCGC TCA GCGAGGC TTTTTTGTTTATACC Patl_0493 570525 - 571445 + | Dyp-type peroxidase family protein TERM 585 571606 - 571629 + T 86 -4.5 -5.42514 | overlap 571608 GTTCCGTGGACTTTT AGGGGCAAC ACTCTG GTTGCCCTG TTTTTTACTTTCTCG TERM 586 571608 - 571627 + T 86 -9.3 -4.33053 | overlap 571606 TCCGTGGACTTTTAG GGGCAAC ACTCTG GTTGCCC TGTTTTTTACTTTCT Patl_0494 572902 - 571808 - | adenylate/guanylate cyclase TERM 587 572435 - 572423 - G 71 -7.7 -4.0031 | AGGGTGATCAAATAA TGCCA TGA TGGCA TCGCCGATAAACTTG TERM 588 572798 - 572813 + g 78 -6.2 -4.66163 | AGACATTTTTTCATG GCTTAA CGCT TTAAGC TTTTTCAGTAAAAAT Patl_0495 574242 - 572947 - | glutamate-1-semialdehyde-2,1-aminomutase Patl_0496 575301 - 574297 - | aspartate carbamoyltransferase TERM 589 575630 - 575646 + r 71 -6.5 -4.24342 | CTGTTGATGACTCTA TGCGTAG TAT CAACGCA TTTATTCATACCCAA TERM 590 576021 - 576039 + r 76 -3.1 -5.22006 | opp_overlap 576021 TTTTATCGTATATTA CTCATGC ATGTC GAATGAG TTTTTCTTGTAATAC Patl_0498 576738 - 576022 - | lipolytic enzyme, G-D-S-L TERM 591 576137 - 576107 - G 72 -10.6 -2.88023 | gap 1, overlap 576106 GCACCAGGATGAAAG CCATC-ATCAGCG ATAAAG CGCTGATCGATGG GGAAGGGGGCACTGA TERM 592 576913 - 576956 + r 71 -6.9 -4.07885 | opp_overlap 576913 AATAGCTGCACTCAA GGAATTTAGCCAGTTAT GAACTGTTAA AAAACTGGCTACATTCC TTTTACCAGAGCATC Patl_0499 578020 - 576959 - | peptidase M12A, astacin Patl_0500 578777 - 578325 - | AsnC family transcriptional regulator Patl_0501 578895 - 579488 + | lysine exporter protein LysE/YggA Patl_0502 580024 - 579605 - | peptidylprolyl isomerase, FKBP-type Patl_0503 580581 - 580126 - | hypothetical protein TERM 593 580601 - 580621 + r 70 -8.3 -3.37959 | opp_overlap 580602, overlap 580602 TTTGTCCTTTTTAAT ATCACCTCA CCC TGAGGTGAC TTGGTATTAACGTTC TERM 594 580620 - 580602 - R 82 -11.8 -3.01712 | opp_overlap 580601 580602 TTGTCCTTTTTAATA TCACCTCA CCC TGAGGTGA CTTGGTATTAACGTT TERM 595 580602 - 580620 + r 81 -11.8 -2.62293 | opp_overlap 580602, overlap 580601 TTGTCCTTTTTAATA TCACCTCA CCC TGAGGTGA CTTGGTATTAACGTT Patl_0504 581420 - 580890 - | hypothetical protein Patl_0505 584083 - 581408 - | PPE repeat-containing protein TERM 596 584647 - 584657 + G 77 -6.8 -4.40561 | overlap 584644 GTATTTTCGCTTGGC TGCC CGA GGCA TTCTTTTTGGCCGGA Patl_0506 584541 - 585221 + | hypothetical protein Patl_0507 588406 - 585269 - | multi-sensor hybrid histidine kinase TERM 597 586288 - 586263 - G 70 -4.7 -4.43879 | opp_overlap 586277 ATCATGCAATCAAAA GCTTTTGTGCA GGTT TGCAAAAAGGC AATTGAGTCGACACT TERM 598 586873 - 586883 + g 71 -6.8 -4.15044 | CGCCTATCATCTCTT CGAG TAA CTCG TTTATTGAAAAAGGA TERM 599 588843 - 588861 + G 76 -11.8 -2.75022 | overlap 588842 CCATGCCCTCAGGGC TCACCATC AAA GATGGTGA CTTATATGTGGCAGA Patl_0508 588566 - 589681 + | L-sorbosone dehydrogenase (SNDH) TERM 600 589731 - 589701 - f 100 -14.9 -3.57144 | gap 1, overlap 589683 589702 CTTTTTACGTTTAAA GCGGGAGCGAAAAC GTTG GTTTTCGCTCCC-C AACAATAATAACAGC TERM 601 589731 - 589702 - f 95 -15.1 -2.74144 | overlap 589683 589701 TTTTTACGTTTAAAG CGGGAGCGAAAAC GTTG GTTTTCGCTCCCC AACAATAATAACAGC TERM 602 590632 - 590619 - g 72 -3.1 -5.05782 | gap 1, opp_overlap 590619 ATGCAGGCTAAAAAA CTG-CC TAT GGTCAG TGATTTACGTGATGA Patl_0509 589764 - 592076 + | DNA topoisomerase IV subunit A TERM 603 592084 - 592116 + F 75 -7.8 -4.00042 | overlap 592087 592107 CCCTATAATCCTGCT TGATCGGCTATAGG TTTTT TCTATAGCCGATGG TTATTTCATAAAAGG TERM 604 592087 - 592113 + F 82 -11.7 -3.05069 | overlap 592084 592107 TATAATCCTGCTTGA TCGGCTATAGG TTTTT TCTATAGCCGA TGGTTATTTCATAAA Patl_0510 592139 - 593803 + | carboxylesterase TERM 605 594834 - 594813 - g 74 -5.9 -4.61199 | ACTTGATACAGAAAA TGCCACT GAATTGGT AGTGGCA CAATGCGATCTTATC Patl_0511 593812 - 594930 + | succinylglutamate desuccinylase/aspartoacylase Patl_0512 595445 - 594948 - | AsnC family transcriptional regulator Patl_0513 596991 - 595672 - | peptidase M23B Patl_0514 597181 - 598380 + | tyrosyl-tRNA synthetase TERM 606 598390 - 598418 + T 93 -10.3 -4.70613 | opp_overlap 598381 AGCTAAGTCCAATGG GCGGTTTGCTCGT ATG GTGAGTGAACCGC TTTTCTTAAGGTTTT Patl_0515 598840 - 598424 - | hypothetical protein TERM 607 598713 - 598736 + g 72 -8.2 -3.70068 | TGGGCATGGGTATTC TCTTGATCCT GCGT GGGGTCAAGA TTTCGGATTGTGCTG Patl_0516 599371 - 598922 - | hypothetical protein Patl_0517 600442 - 599546 - | cobalamin biosynthesis protein CbiB TERM 608 600483 - 600440 - G 93 -14.6 -3.36289 | gap 1, opp_overlap 600446, overlap 600442 TAGCATTTCAACTAA CATCACCACGCCCAGCACCCA AAT TGGTTGCAGGGCG-GGTGATT GCAAGAACACATCGA TERM 609 600481 - 600442 - G 100 -17.2 -3.24825 | gap 1, opp_overlap 600446, overlap 600440 GCATTTCAACTAACA TCACCACGCCCAGCACCCA AAT TGGTTGCAGGGCG-GGTGA TTGCAAGAACACATC TERM 610 600446 - 600478 + r 90 -13.3 -2.70932 | opp_overlap 600442 600440 TTCAACTAACATCAC CACGCCCAGCACCCA AAT TGGTTGCAGGGCGGG TGATTGCAAGAACAC Patl_0518 601231 - 600524 - | adenosylhomocysteine nucleosidase TERM 611 600563 - 600580 + g 72 -6.3 -4.28994 | gap 1 GGTGAGCATTTCCAT CAC-CAGC ATG GCTGAGTG TTTTGCTGCCTGCTC TERM 612 601415 - 601365 - R 100 -12.1 -5.09225 | gap 1, opp_overlap 601367 AGGTGACGTAAAAAA GCGCCATCCTTAGAGGCTATTTGT CTTA ACAAAGAACTTCTAAGG-TAGCGC AAGCAAGCGGCAAGT Patl_0519 602643 - 601477 - | hypothetical protein TERM 613 602838 - 602865 + r 90 -8.5 -5.00616 | gap 1, opp_overlap 602837 602838, overlap 602839 CGCTATACTTTAAAC TGGCCGA-CTAG CCCTT CTAGCTCGGCCG TTTTTTGGCGCAAAC TERM 614 602839 - 602864 + r 77 -9.8 -3.60048 | gap 1, opp_overlap 602837 602838, overlap 602838 GCTATACTTTAAACT GGCCGA-CTAG CCCTT CTAGCTCGGCC GTTTTTTGGCGCAAA Patl_0520 604510 - 602825 - | methyl-accepting chemotaxis sensory transducer TERM 615 605583 - 605595 + G 77 -3.3 -5.1764 | opp_overlap 605583 CCAGAGGTAATGAAC GCAGA AGA TCCGC TTTTTATCTTGTATA Patl_0521 604827 - 606767 + | acetate--CoA ligase TERM 616 607348 - 607322 - gT 80 -10.9 -3.35465 | gap 1, opp_overlap 607321 ACCTAGATATAGCAA CCGCCACG-GTG AAAG CACACGTGACGG CTATCTTCAAGAAAT Patl_0523 610831 - 607394 - | multi-sensor hybrid histidine kinase Patl_0522 606787 - 607446 + | two component LuxR family transcriptional regulator TERM 617 609591 - 609576 - Gf 76 -7.5 -4.1891 | CGCTTCCAATATAAA CCGCC GACAAT GGCGG GTAACAACTGTATGA Patl_0524 611001 - 611279 + | hypothetical protein Patl_0525 611290 - 613011 + | Na+/solute symporter TERM 618 613064 - 613083 + F 100 -10.7 -5.36441 | opp_overlap 613062 613064 CCTTTTACTACAATA GCGCCCA CCTCGT TGGGCGC TTTTTTATGTGAGAC TERM 619 613083 - 613064 - f 80 -10.7 -3.27475 | opp_overlap 613064, overlap 613062 CCTTTTACTACAATA GCGCCCA CCTCGT TGGGCGC TTTTTTATGTGAGAC Patl_0526 613208 - 614350 + | hypothetical protein TERM 620 614968 - 614988 + G 76 -2.5 -5.27923 | opp_overlap 614958 ACGAATGCTCAGCAG CATGGTC AATATGG GGCCGTG TTTTTTATCGACTTA TERM 621 615923 - 615937 + G 72 -4.9 -4.58585 | TGGACGATTTTGGTA GCGGC TATTC GTCGC TTTCTTATTTACATC TERM 622 616174 - 616162 - g 71 -7.7 -3.87815 | TTTCATTTCTATAAA CCCTT ACC AAGGG AAGCGTTTGTCAACT Patl_0527 614383 - 616209 + | diguanylate cyclase/phosphodiesterase TERM 623 618230 - 618246 + G 71 -8 -3.84719 | opp_overlap 618230 GCGTTATCCGAAGAA CACAGC AAGCC GCTGTG TTTAAATTTGCCGGT Patl_0528 616438 - 618273 + | signal-transduction protein Patl_0529 618306 - 618980 + | exonuclease, RNase T and DNA polymerase III TERM 624 619044 - 619057 + F 85 -3.9 -5.61913 | TTAATTAATTGTTAA TAAGT TGTT ACTTA TTTTTTCTCTTTGTT TERM 625 619472 - 619482 + G 80 -6.8 -4.59089 | CTTTCACAACCGAGC GGCA AAT TGCC TTTCTTTGTCAATTA TERM 626 619893 - 619915 + G 72 -9.2 -3.54129 | overlap 619887 CGAGTTTCAGAGCGA TACGCTCTAT CTG AAAGAGCGTA TTTGAAAGCGCTGTC Patl_0530 619131 - 620309 + | tetratricopeptide TPR_2 TERM 627 620327 - 620347 + T 100 -12.7 -4.65838 | opp_overlap 620327 TTAGGCCAAAAAAAA CCTACTTCA CAT TGAAGTAGG TTTTTGACGTATCTA TERM 628 620347 - 620327 - T 100 -12.7 -5.78622 | opp_overlap 620327 TTAGGCCAAAAAAAA CCTACTTCA CAT TGAAGTAGG TTTTTGACGTATCTA Patl_0531 621211 - 620372 - | 2OG-Fe(II) oxygenase TERM 629 621021 - 621011 - G 79 -3.2 -5.40072 | CTTGGTTGAAAAAAA GCCA TCG TGAC TTTGGTTATCAAATG Patl_0532 622486 - 621278 - | nucleoside transporter TERM 630 622354 - 622334 - G 71 -3.9 -4.74801 | overlap 622322 622336 TAAGCCCAGTAAAAA TTCTTTCCC TGG GGGGAAGTA CAGAACCAAAGCACC Patl_0533 623155 - 622532 - | uridine kinase Patl_0534 624425 - 623490 - | hypothetical protein TERM 631 623634 - 623656 + g 75 -6.2 -4.4017 | opp_overlap 623624 GAATATCTCGTCCAA CGCTGAGCGA ATT TCACTCAACG TTTTATCGAGGTTGG Patl_0535 625254 - 624415 - | hypothetical protein TERM 632 625576 - 625593 + H 78 -4.2 -5.30155 | overlap 625589 AGCGGGTAGGGAATT TTTGAC CAGTTA GTCAAA TTTTTTGATTACTGG TERM 633 626455 - 626471 + G 70 -2.1 -4.98255 | opp_overlap 626458, overlap 626458 AAAACAGGTACCAAC GAAGTGC ATG GCTCTGC TTTTTATGATTACGG TERM 634 627094 - 627105 + G 73 -4.4 -4.74504 | opp_overlap 627094 AAGATCTTTTTAGAA GACA TGAC TGTC TTTTTAGGTTCGGAT Patl_0536 625702 - 628728 + | OmpA family Oar-like outer membrane protein protein TERM 635 628752 - 628770 + F 100 -11.7 -5.54885 | opp_overlap 628752 TGATTATGATTGAAA GCCGGCT CTTGT AGCCGGC TTTTTTATTGGTGTT TERM 636 628770 - 628752 - f 89 -11.7 -3.69323 | opp_overlap 628752 TGATTATGATTGAAA GCCGGCT CTTGT AGCCGGC TTTTTTATTGGTGTT Patl_0537 628798 - 629973 + | endonuclease/exonuclease/phosphatase TERM 637 630006 - 630038 + T 77 -10.6 -2.7535 | overlap 630004 630008 CTAAACGTTAGTGAT GAGCCTGTACAGTC CTAGT GTGTGTACAGGCTC TAGTGTGTTCAGGCA Patl_0538 630528 - 630064 - | arginine repressor Patl_0539 630694 - 631629 + | malate dehydrogenase TERM 638 631611 - 631633 + T 71 -6.4 -4.26903 | CATAAAACTAGGTGT TGAATTCGTT AAT AACTAATTCA TTTTCCTAAAATCAA TERM 639 631678 - 631645 - T 79 -8.3 -4.08767 | opp_overlap 631647 631655, overlap 631655 TTCATTTTCCTAAAA TCAAAAAAAACCAGC AGAT GCTGGTTTTTTTATA TCTGCTATTCAGCAA TERM 640 631647 - 631676 + T 78 -10.9 -3.00923 | opp_overlap 631645 631655, overlap 631655 CATTTTCCTAAAATC AAAAAAAACCAGC AGAT GCTGGTTTTTTTA TATCTGCTATTCAGC TERM 641 631655 - 631668 + T 100 -8.1 -5.76633 | opp_overlap 631655 631645, overlap 631647 TAAAATCAAAAAAAA CCAGC AGAT GCTGG TTTTTTTATATCTGC TERM 642 631668 - 631655 - T 100 -8.1 -6.07969 | opp_overlap 631647 631655, overlap 631645 TAAAATCAAAAAAAA CCAGC AGAT GCTGG TTTTTTTATATCTGC Patl_0540 632326 - 631721 - | hypothetical protein Patl_0541 632910 - 632464 - | hypothetical protein Patl_0542 632976 - 633497 + | hypothetical protein TERM 643 633609 - 633584 - T 79 -9 -3.95448 | ACAGGAAAAGTGAAA GCCGGCTTGC GTGATG ACAAACCGGC TGAATGCAGTTAATT Patl_0543 634747 - 633647 - | hypothetical protein Patl_0544 635401 - 635057 - | iron-sulfur cluster assembly accessory protein TERM 644 635141 - 635121 - G 72 -6.1 -4.258 | overlap 635122 TTATTGACTAAGAAA CGAGAGCCT TCA AGACCCTCA GTGTAATCAACCTCG Patl_0545 636214 - 635516 - | hypothetical protein Patl_0546 636328 - 638007 + | Cl- channel, voltage gated Patl_0547 638047 - 638475 + | hypothetical protein Patl_0548 639081 - 639635 + | GTP cyclohydrolase I TERM 645 639692 - 639657 - f 93 -9.8 -5.11937 | opp_overlap 639657 AACAATCTCAAAAAA GCACGCCAACCGTTAA ATCA TTAAGTGTTGGCATGC TTTTGTCATACTCAC TERM 646 639657 - 639692 + F 81 -7.6 -4.4891 | opp_overlap 639657 AACAATCTCAAAAAA GCACGCCAACCGTTAA ATCA TTAAGTGTTGGCATGC TTTTGTCATACTCAC TERM 647 639769 - 639782 + F 86 -4.5 -5.36441 | CGTGTGCTCCAATAT GGTGC GTCT GCATC TTTTTTGTATGGAAA TERM 648 640772 - 640762 - g 78 -5.4 -4.7629 | opp_overlap 640760 640762, overlap 640754 TCAGCAAGGCAAAAA CGTT GAG AACG TGTTTGACGGTATCG Patl_0549 639866 - 640855 + | purine phosphorylases family protein 1 TERM 649 640875 - 640920 + T 100 -15.1 -3.91911 | gap 1, opp_overlap 640880 640888, overlap 640888 AATAAACGTATTCAA GTA-GATATAAAAACACCGTCG TTT CGACGGTGTTTTTGTATAATAC TTTAGTTCAGCTGCG TERM 650 640914 - 640880 - T 100 -17.4 -2.92371 | opp_overlap 640875 640888, overlap 640888 ACGTATTCAAGTAGA TATAAAAACACCGTCG TTT CGACGGTGTTTTTGTA TAATACTTTAGTTCA TERM 651 640906 - 640888 - T 100 -14.6 -5.06505 | opp_overlap 640875 640888, overlap 640880 AAGTAGATATAAAAA CACCGTCG TTT CGACGGTG TTTTTGTATAATACT TERM 652 640888 - 640906 + T 100 -14.6 -5.01497 | opp_overlap 640888 640880, overlap 640875 AAGTAGATATAAAAA CACCGTCG TTT CGACGGTG TTTTTGTATAATACT Patl_0550 641672 - 640941 - | hypothetical protein Patl_0551 642886 - 641780 - | AFG1-like ATPase Patl_0552 643130 - 643570 + | hypothetical protein Patl_0553 643664 - 645034 + | protease Do TERM 653 645044 - 645078 + F 100 -12.3 -4.87291 | opp_overlap 645045, overlap 645045 CGCTAGTTTTACCAA ATTAATGGCAGCCCA AACAC TGGGCTGCTATTAAC TTTTTCCTTACAGTG TERM 654 645045 - 645077 + F 100 -15.8 -3.51651 | opp_overlap 645045, overlap 645044 GCTAGTTTTACCAAA TTAATGGCAGCCCA AACAC TGGGCTGCTATTAA CTTTTTCCTTACAGT TERM 655 645077 - 645045 - f 100 -14.3 -3.73775 | opp_overlap 645045 645044 GCTAGTTTTACCAAA TTAATGGCAGCCCAA ACA CTGGGCTGCTATTAA CTTTTTCCTTACAGT TERM 656 645792 - 645810 + G 71 -6.8 -4.08767 | GCAATGGCTATTTGA TTGGCATT AAC AATGCTAA TTTTAAAACACTGGA Patl_0554 645212 - 646198 + | PDZ/DHR/GLGF TERM 657 646292 - 646257 - T 79 -6.9 -4.59773 | GGGCAGCGTTAAAAA GCTTGGTTTTCGAAG AAATAA CCGTGAAAACCAAGC CTGCATAACTTTTTC Patl_0555 647566 - 646307 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Patl_0556 647893 - 647636 - | BolA-like protein Patl_0557 648253 - 647921 - | anti-sigma-factor antagonist TERM 658 648206 - 648177 - G 86 -11.6 -3.65351 | gap 1, opp_overlap 648171 GTATCTCGATTCAAA TTCCCC-GAGAGT AAGAA ACTCTCAGGGGAA GATGAGTCGTTCACA Patl_0558 648895 - 648254 - | toluene tolerance TERM 659 648726 - 648740 + g 72 -2.8 -5.07275 | TGCTCGATGATGTCC CTTAGA ATT TCTGGG TTTTTCTGTATCTCA Patl_0559 649391 - 648927 - | hypothetical protein Patl_0560 650184 - 649405 - | hypothetical protein Patl_0561 650982 - 650185 - | ABC transporter related TERM 660 650302 - 650328 + g 81 -3.6 -5.36441 | overlap 650303 650306 ATCGCTCTGTTTTAT TTGTTCGGGAGT ACC ACTACCGATCAC TTTTTTCTCTGCCAA Patl_0562 651314 - 652276 + | CaCA family Na(+)/Ca(+) antiporter TERM 661 652855 - 652868 + G 75 -6.7 -4.43309 | overlap 652851 652867 TCATCCTGGAGGTGC GCTTG GGCG CAAGC TTTTACTTAAGCTTG Patl_0563 652283 - 653254 + | KpsF/GutQ family protein Patl_0564 653254 - 653808 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Patl_0565 653805 - 654368 + | hypothetical protein TERM 662 654504 - 654486 - g 70 -2.5 -5.0925 | gap 1, overlap 654502 CGGTAAAACTAAAAA GTCTATCT TTCG AGA-AGAC GTGCACATCAATCAA Patl_0566 654409 - 654930 + | OstA-like protein Patl_0567 654930 - 655655 + | ABC transporter related TERM 663 656695 - 656683 - g 77 -3.3 -5.14163 | AGTGAGTAAGAAAAA TGGCC GTT GGACA GTAGAGCTTAACCCA TERM 664 657126 - 657115 - g 78 -5.8 -4.7497 | CGCATTGATTAAAAA GCTG GTCG CAGC TGAAAAACCAAGCAA Patl_0568 655778 - 657271 + | RNA polymerase, sigma 54 subunit, RpoN TERM 665 657273 - 657261 - f 86 -7.7 -4.93547 | opp_overlap 657261 CGAACCAACGAAAAA GCCTA TTG TAGGC TGATTAAAGAAGGAA Patl_0569 657297 - 657584 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 666 657828 - 657813 - g 74 -6.8 -4.3739 | opp_overlap 657823 657824 CATGGCCGTATAAAA GGGCTA GAGT CAGCCC TAGGCGTGCTTGTAA Patl_0570 657600 - 658043 + | PTS IIA-like nitrogen-regulatory protein PtsN Patl_0571 658046 - 658891 + | hypothetical protein Patl_0572 658888 - 659166 + | HPr family phosphocarrier protein Patl_0573 660037 - 659267 - | endonuclease TERM 667 659877 - 659897 + g 84 -10.5 -3.86981 | TTATATGCGGCCCAA TCGGCAAAC TTC GTTTGCTGA TTATTGCTTATGGTG Patl_0574 661012 - 660173 - | ApbE-like lipoprotein TERM 668 660826 - 660803 - G 70 -8.8 -3.36515 | opp_overlap 660801 660803, overlap 660801 GCTTAGTTCGAAACA CGTTTGCCCG AAGG CGAGCAATCG ATGTGTTTCTTGATC TERM 669 661041 - 661022 - R 76 -7.2 -4.21812 | opp_overlap 661022 GGCCATGCAAAAGAA GTGACCAT GGTA ATAGTCAC TTTTAGCTATTAGGG Patl_0575 662456 - 661158 - | hypothetical protein TERM 670 661908 - 661884 - G 76 -8.5 -4.10161 | CACCATTGTGGAAAA TCCGATCGGCG CTT CGCCAACAGGA TCAATGCTGTCGTAT Patl_0576 662686 - 662447 - | putative lipoprotein Patl_0577 663209 - 662691 - | redoxin Patl_0578 663416 - 664537 + | peptidase M28 Patl_0579 665203 - 664628 - | helix-turn-helix, type 11 Patl_0580 665706 - 666269 + | Lipocalin-like TERM 671 666430 - 666418 - g 72 -2.7 -4.91873 | overlap 666419 TAGAGCAAGCAAAAA CGTTT TTA AAACA TATCTCAGATCATGC Patl_0581 666360 - 666881 + | hypothetical protein Patl_0582 667007 - 667345 + | alkylphosphonate utilization operon protein PhnA Patl_0583 669196 - 667442 - | phospholipid/glycerol acyltransferase TERM 672 667964 - 667938 - G 77 -3.7 -5.14563 | gap 1, opp_overlap 667960, overlap 667940 667956 667960 TCTGGGATTAAAAAA GAGCGCCCCATT TCTA AACAAGGCGC-C TGGCGGTTAATGAAA TERM 673 667963 - 667940 - G 76 -7.4 -4.20707 | opp_overlap 667960, overlap 667938 667956 667960 TGGGATTAAAAAAGA GCGCCCCATT TCTA AACAAGGCGC CTGGCGGTTAATGAA TERM 674 669674 - 669658 - g 73 -2.2 -5.1101 | opp_overlap 669658 CGAGCAGCGAAAAAA GCCG GTGTGGTTG CGGC TAAGTTATATCCAGC Patl_0584 669385 - 670419 + | dihydroorotase TERM 675 670815 - 670805 - g 79 -4 -5.10767 | TACTGAAGATAAAAA GTTT GTA AAAC GAAAAGAAGACTTGA Patl_0585 670419 - 671243 + | amino acid ABC transporter periplasmic protein Patl_0586 671295 - 672158 + | amino acid ABC transporter periplasmic protein TERM 676 672859 - 672847 - g 74 -6.9 -4.33808 | opp_overlap 672847 CAAACTAAGTTAAAA GCCCG AGC CGGAC TGTTAGACGCGCTAG Patl_0587 672223 - 672912 + | enoyl-CoA hydratase TERM 677 673641 - 673631 - g 77 -6.8 -4.41548 | opp_overlap 673635 GCACATCGTACAAAA GCTG TAG CAGC GCTATTAAGTCATTA Patl_0588 672941 - 674320 + | ATP-dependent RNA helicase DbpA TERM 678 674353 - 674377 + T 100 -18.7 -4.63184 | opp_overlap 674353 TTTGAATAAAAAAAA GGCGATGAGTG ACT CACTCATCGCC TTTTTCGAATCAGTT TERM 679 674377 - 674353 - T 100 -18.7 -6.09888 | opp_overlap 674353 TTTGAATAAAAAAAA GGCGATGAGTG ACT CACTCATCGCC TTTTTCGAATCAGTT Patl_0589 674742 - 674404 - | hypothetical protein Patl_0590 675225 - 675845 + | dimethylmenaquinone methyltransferase TERM 680 676696 - 676721 + G 71 -7.6 -3.9534 | opp_overlap 676695, overlap 676689 GTGTGGTTCAGTAAT GCACTGTTAG TATTCT CTATCAGTGC TTTATCCATCTACCT TERM 681 676826 - 676840 + G 74 -5.6 -4.61231 | CTCAGTGGATCATGT GGGAAG TAT CATCCC TTTTTGAAAATATAG Patl_0591 675868 - 677709 + | ABC transporter related TERM 682 677713 - 677751 + F 76 -6.8 -4.48263 | opp_overlap 677711 677713 677716, overlap 677716 GGTGTTGAGTAAAGA CTAGGGTAAAGCATAC ATTCACG GTACGCTTTATCCTCG TTTTCATCTTGTATA Patl_0592 678242 - 678619 + | preprotein translocase, SecE subunit Patl_0593 678622 - 679194 + | NusG antitermination factor TERM 683 679282 - 679298 + F 93 -8 -5.5112 | opp_overlap 679282 679280 GGAAGTGAACGAAGA GACAGC GCTAG GCTGTC TTTTTTGTTAATACA TERM 684 679387 - 679403 + F 100 -6.6 -5.79588 | opp_overlap 679387 AGAAATTAAAATAAA GATGTC CAAAC GACATC TTTTTTTGATTTTAA TERM 685 679403 - 679387 - f 84 -6.6 -4.84353 | opp_overlap 679387 AGAAATTAAAATAAA GATGTC CAAAC GACATC TTTTTTTGATTTTAA Patl_0594 679596 - 680024 + | ribosomal protein L11 rplA 680028 - 680729 + | 50S ribosomal protein L1 rplJ 681094 - 681612 + | 50S ribosomal protein L10 TERM 686 681621 - 681601 - f 76 -9.1 -3.76224 | opp_overlap 681601, overlap 681605 TTGGCAGCGATCAAA GAAACCAAA TAA TTTGGTTCC TTTGTACATATAATT TERM 687 681617 - 681605 - f 77 -6.3 -4.50627 | opp_overlap 681601, overlap 681601 CAGCGATCAAAGAAA CCAAA TAA TTTGG TTCCTTTGTACATAT rplL 681668 - 682039 + | 50S ribosomal protein L7/L12 TERM 688 682056 - 682085 + F 70 -5.8 -4.46212 | opp_overlap 682052 682072, overlap 682077 CTGTCTAACGACAGG TTACTAGCCTGA AAAGGC TTAGGCTGGTGA TTTTATAATCACCAG TERM 689 682077 - 682102 + F 100 -16.3 -4.64766 | opp_overlap 682072, overlap 682056 GCCTGAAAAGGCTTA GGCTGGTGATT TTAT AATCACCAGCC TTTTTGCGCTGTAGG TERM 690 682511 - 682498 - g 78 -5.3 -5.06414 | TTTTCCCAATAAAAA GTTAC TCTG GTAAC GCAGAATTACAGTAC TERM 691 684148 - 684127 - g 72 -8.1 -3.767 | TAGTGACTGACGAAA TCGATTACT TATC AGCAATCGA AGAAGGTCAATTCTC TERM 692 686247 - 686237 - g 80 -5.4 -4.91459 | opp_overlap 686225, overlap 686225 686240 TAAGATGTATAAAAA CATC GTT GATG GTGATCATCGCATGG TERM 693 686302 - 686280 - g 70 -9.3 -3.32844 | opp_overlap 686262 686278 CCTGGTATGCCAGAA TCTTTCAAC GTATT GTTGAAAGA GATTCGCTCACTAGG Patl_0598 682317 - 686345 + | DNA-directed RNA polymerase, beta subunit TERM 694 686376 - 686405 + F 91 -10.8 -4.62783 | opp_overlap 686376 CTTATAGACAGGATA GTCTGATGGGTG TTAATC CATCCATCAGGC TTTTTCAACTGACTC Patl_0599 686436 - 690623 + | DNA-directed RNA polymerase subunit beta' TERM 695 690729 - 690768 + F 100 -12.8 -4.75063 | opp_overlap 690727, overlap 690763 TTTGGTCATTAGACT TCCGCGACCCGAAATTTG GTAA CAGATAACGGGCCGCGGA TTTTTCGCGTTTTAT TERM 696 690763 - 690777 + F 82 -7.8 -4.60143 | opp_overlap 690727, overlap 690729 TAACAGATAACGGGC CGCGGA TTT TTCGCG TTTTATATCCTATGT rpsL 690833 - 691207 + | 30S ribosomal protein S12 Patl_0601 691284 - 691754 + | 30S ribosomal protein S7 TERM 697 691765 - 691731 - f 82 -8.6 -4.2528 | overlap 691727 GCTGAAGCCAACAAA GCATTCGCTCACTACC GTT GGTAATAAGAGAAAGC TATGGCTCGTAAAAC Patl_0602 691767 - 693872 + | translation elongation factor G TERM 698 693884 - 693911 + F 84 -7.8 -4.74103 | gap 1, overlap 693885 TTAATAAAGGTCTGG TCCGGT-CTACTA CAT TAGTAGGGCCGGG TTTTTAACTTAGGAA TERM 699 693885 - 693910 + F 72 -9.1 -3.4398 | gap 1, overlap 693884 TAATAAAGGTCTGGT CCGGT-CTACTA CAT TAGTAGGGCCGG GTTTTTAACTTAGGA TERM 700 694142 - 694124 - g 71 -10.4 -2.64099 | overlap 694123 GCGTGGTATCACAAT TTCAACGT CTC ACGTTGAA TACGATACGCCTACT Patl_0603 693936 - 695120 + | elongation factor Tu TERM 701 695147 - 695162 + F 100 -6.8 -5.77988 | opp_overlap 695147, overlap 695139 TTGATTTGAAAGAAA GGTCAC TTCG GTGGCC TTTTTTTATGTCTAT TERM 702 695477 - 695492 + F 100 -6.8 -5.77988 | opp_overlap 695477, overlap 695469 TTGATTTGAAAGAAA GGTCAC TTCG GTGGCC TTTTTTTATGTCTAT TERM 703 695527 - 695514 - f 71 -5.2 -4.53303 | overlap 695516 TATGTCTATACAAAA CGGG GTTGAA CCCG TCCCTGGTGACGCAA TERM 704 695885 - 695904 + F 88 -8.6 -4.83246 | CTTTCGAAGTTATAG GGCTGGTA AAAT TACTAGCC TTTATTTGTTTGTAG TERM 705 696111 - 696127 + G 73 -10.9 -2.71011 | overlap 696113 GATGACCGCTCGCAC CACGATC GAG GATCGTG TACTTGGCACAGAGT Patl_0604 696007 - 697932 + | methyl-accepting chemotaxis sensory transducer Patl_0605 698583 - 697954 - | hypothetical protein TERM 706 698037 - 698066 + g 76 -11.6 -2.69471 | opp_overlap 698039 698060, overlap 698036 698039 AGCTTGTAACCTGAA TAGCCTCTATTG AAACCA CGATAGAGGCTA CTTCTGTAAACCTCG TERM 707 698645 - 698670 + r 93 -10.5 -5.10461 | opp_overlap 698645 GTAAAATGAAAAAAA CTGTCTCAAGT GATT ACCTGAGACAG TTTTTATTGCATCAA TERM 708 698670 - 698645 - R 100 -12.7 -5.79588 | opp_overlap 698645 GTAAAATGAAAAAAA CTGTCTCAAGT GATT ACCTGAGACAG TTTTTATTGCATCAA TERM 709 698783 - 698754 - R 78 -10.7 -3.04144 | opp_overlap 698772, overlap 698771 GTGCTACCCTGAAGA CGCTACCCGGTAG AGTA CTACCCGGTAGAG TACTACCCGGTAGAG TERM 710 698796 - 698771 - R 81 -11.9 -2.62616 | opp_overlap 698772, overlap 698754 698786 CTACCCGGTAGAGTA CTACCCGGTAG AGTA CTACCCGGTAG AGTACTACCCGGTAG TERM 711 698811 - 698786 - R 81 -11.9 -2.62616 | opp_overlap 698772, overlap 698771 CTACCCGGTAGAGTA CTACCCGGTAG AGTA CTACCCGGTAG AGTACTACCCCGTAT Patl_0606 701434 - 698816 - | phosphoenolpyruvate carboxylase TERM 712 699237 - 699250 + g 74 -8.1 -3.91084 | opp_overlap 699237 TGACCTGCGTCAATA GCGGT TTGA ACCGC TTTCATTGCACCTAA Patl_0607 701738 - 702358 + | peptidylprolyl isomerase, FKBP-type TERM 713 702352 - 702364 + F 82 -7.7 -4.61566 | opp_overlap 702351, overlap 702362 GCTACTTGATATCAT TGCGT AAC ACGCA TTTTATGCTTTAAAA TERM 714 702380 - 702393 + F 100 -9.5 -5.64274 | opp_overlap 702380 TTTTATGCTTTAAAA GCCGG TTCG CCGGC TTTTTTTATGCCTGA TERM 715 702393 - 702380 - f 86 -9.5 -4.09685 | opp_overlap 702380 TTTTATGCTTTAAAA GCCGG TTCG CCGGC TTTTTTTATGCCTGA TERM 716 703220 - 703204 - g 73 -4.3 -4.87626 | overlap 703206 CCTGAAGAGCAAAAA GCCACCG CGA CGTTAGC AGGTGAGCTACCTAG Patl_0608 702556 - 704121 + | sulphate transporter TERM 717 704181 - 704159 - T 100 -13.5 -5.79588 | opp_overlap 704159 GTAAAATTAAAAAAA CCGCTGAAG GGTCA CTTCAGCGG TTTTTTTTAAGAGAT TERM 718 704159 - 704181 + T 100 -13.5 -5.75945 | opp_overlap 704159 GTAAAATTAAAAAAA CCGCTGAAG GGTCA CTTCAGCGG TTTTTTTTAAGAGAT Patl_0609 704366 - 704196 - | hypothetical protein Patl_0610 704745 - 706373 + | sodium/hydrogen exchanger TERM 719 706530 - 706519 - f 80 -4.4 -5.18371 | CGGCACAAAATAAAA TGAG GAAG CTCA ATGAGATTACTAGGA Patl_0611 706531 - 707571 + | alpha/beta hydrolase fold Patl_0612 708255 - 707629 - | multiple antibiotic resistance (MarC)-related proteins TERM 720 708419 - 708403 - H 82 -7.9 -4.4891 | overlap 708392 708404 GCTACCACGAGAAAA GTGGCGC ATT GCGCCAG GTAAGCGAATTACGG TERM 721 708418 - 708404 - H 85 -11.4 -3.28864 | overlap 708392 708403 CTACCACGAGAAAAG TGGCGC ATT GCGCCA GGTAAGCGAATTACG TERM 722 708515 - 708541 + G 76 -7.4 -4.21676 | gap 1, overlap 708518 CTCAAAGCACTCTGT CAAGGCGATGC TTTATC GCAT-GCCTTG TTTTCAGTAGATTAT Patl_0613 708470 - 709135 + | yecA family protein Patl_0614 709532 - 709146 - | hypothetical protein Patl_0615 710612 - 709635 - | diguanylate cyclase TERM 723 711588 - 711600 + G 75 -2.7 -5.1861 | TGGCGGTGTGTACCA GTTAT TAC ATGAC TTTTTTGCTCGTGAA Patl_0616 710884 - 712671 + | Cys/Met metabolism pyridoxal-phosphate-dependent enzymes TERM 724 712733 - 712766 + F 75 -2.5 -5.27023 | gap 1, overlap 712734 TAGCTTTGCCTATAC TGAGCGACTACTGT CATTACC ACATT-GTCGCTCG TTTTCTTTTTCAACT TERM 725 712941 - 712925 - g 70 -5.1 -4.37886 | overlap 712926 TCAGGGGGCACAAAA TGCCAGC CTG GCTAACA CTTTTGGTTTTGATC Patl_0617 712878 - 714923 + | ATP-dependent DNA helicase RecQ TERM 726 715207 - 715237 + F 70 -7.8 -3.61764 | overlap 715230 TTAAAAATACATAAC TTGTTACCGAATAA TAG TTATTTGGTGATAA TTTACACCTTAGTAA Patl_0618 715336 - 716499 + | RND family efflux transporter MFP subunit Patl_0619 716499 - 719636 + | acriflavin resistance protein TERM 727 719643 - 719693 + F 80 -6.2 -4.67755 | gap 1, overlap 719644 719645 GATAAGTAATCATCT CCTCAATGTGCCCCCAAGA-AAG CGCCGT CTTCTCTTGGGGGCTCAGTGAAC TTTTTCACTACGTAT TERM 728 719644 - 719692 + F 75 -9.7 -3.3993 | gap 1, overlap 719643 719645 ATAAGTAATCATCTC CTCAATGTGCCCCCAAGA-AAG CGCCGT CTTCTCTTGGGGGCTCAGTGAA CTTTTTCACTACGTA TERM 729 719645 - 719691 + F 90 -13.2 -2.63476 | gap 1, overlap 719644 719643 TAAGTAATCATCTCC TCAATGTGCCCCCAAGA-AAG CGCCGT CTTCTCTTGGGGGCTCAGTGA ACTTTTTCACTACGT Patl_0620 719786 - 720373 + | glutathione S-transferase-like Patl_0621 720406 - 720705 + | hypothetical protein TERM 730 720762 - 720734 - f 95 -13.9 -3.49475 | overlap 720735 GTGACTGCCATATAA CCACTCCCTAGGC TGC GCTTAGGGAGTGA ATAACTGCTCACACG TERM 731 720761 - 720735 - f 95 -15.2 -2.69471 | overlap 720734 TGACTGCCATATAAC CACTCCCTAGGC TGC GCTTAGGGAGTG AATAACTGCTCACAC Patl_0622 721027 - 721515 + | hypothetical protein Patl_0623 721719 - 722087 + | hypothetical protein TERM 732 722155 - 722186 + F 81 -11.2 -3.01857 | opp_overlap 722155 722153, overlap 722148 722147 722155 722157 722159 TTATGAATCGAAAGA TATATCCTAATATA TTGC TATATTGGGATATA TATCTCACTTTTATC TERM 733 722186 - 722155 - f 74 -9 -3.47526 | opp_overlap 722148 722147 722155 722155 722157 722159, overlap 722153 TTATGAATCGAAAGA TATATCCTAATATA TTGC TATATTGGGATATA TATCTCACTTTTATC TERM 734 722157 - 722184 + F 72 -9.4 -3.05268 | opp_overlap 722155 722153, overlap 722155 722155 722148 722147 722159 ATGAATCGAAAGATA TATCCTAATATA TTGC TATATTGGGATA TATATCTCACTTTTA Patl_0624 722308 - 724026 + | acetolactate synthase, large subunit, biosynthetic type Patl_0625 724026 - 724523 + | acetolactate synthase, small subunit TERM 735 724589 - 724560 - T 85 -12.3 -3.21234 | opp_overlap 724560 724567, overlap 724567 ATTCAAACCTAAAAT CTAAAAAGGCTCA AATA TGAGCCTTTTTTG TTACTTGAATTTACT TERM 736 724560 - 724589 + T 87 -12.3 -3.43619 | opp_overlap 724560 724567, overlap 724567 ATTCAAACCTAAAAT CTAAAAAGGCTCA AATA TGAGCCTTTTTTG TTACTTGAATTTACT TERM 737 724582 - 724567 - T 90 -9 -4.87318 | opp_overlap 724560 724567, overlap 724560 CCTAAAATCTAAAAA GGCTCA AATA TGAGCC TTTTTTGTTACTTGA TERM 738 724567 - 724582 + T 100 -9 -5.5604 | opp_overlap 724567 724560, overlap 724560 CCTAAAATCTAAAAA GGCTCA AATA TGAGCC TTTTTTGTTACTTGA Patl_0626 725203 - 724619 - | thymidine kinase Patl_0627 727350 - 725314 - | diguanylate cyclase/phosphodiesterase Patl_0628 728119 - 727478 - | GntR family transcriptional regulator Patl_0629 729325 - 728129 - | benzoate transporter TERM 739 728517 - 728497 - G 74 -8.3 -3.87815 | opp_overlap 728499 CCTCACTGGTACAAA TAGCGGC GGTAATT GCCGCTA GGTTAAAGCTGAAAC TERM 740 728633 - 728623 - G 76 -8.2 -4.07885 | CACTGCCTTTTAAAA CGGC CAT GCCG GGCAAATTTTGCGAG TERM 741 728912 - 728902 - G 82 -6.8 -4.80396 | TAAAAGAGCTAAAAA TGGC GAG GCCA AATTGCAATAGAATA Patl_0630 730285 - 729431 - | bile acid:sodium symporter Patl_0631 731153 - 730410 - | hypothetical protein TERM 742 730545 - 730557 + g 71 -7.7 -3.9644 | overlap 730547 ATGGGGCAAGTTTTT GGCAA GTT TTGCC TTGTTCTGTTGCCCA Patl_0632 732002 - 731253 - | short chain dehydrogenase Patl_0633 732784 - 732080 - | phosphoglycerate mutase Patl_0634 733897 - 732785 - | aminoglycoside phosphotransferase Patl_0635 735119 - 733899 - | acyl-CoA dehydrogenase-like TERM 743 734024 - 734039 + g 70 -9 -3.42078 | AATCACTGCTCATGC CTGCAC CGCC GTGCAG TTGTACTGACATATC TERM 744 735216 - 735201 - H 70 -2.6 -5.04222 | GAATGAAATGAAAAA TAGTAC AGGT ATACTA TGAATATTATTCATT Patl_0636 735248 - 736156 + | LysR family transcriptional regulator TERM 745 736170 - 736192 + T 72 -10.5 -2.57192 | opp_overlap 736170 736171, overlap 736166 AGCTGGGGTAAATAA GCCGCCGCT ATTGC AGCGGCGGG TAGGTTAAATTCAAT TERM 746 736189 - 736170 - T 93 -12.8 -3.90922 | opp_overlap 736170 736166, overlap 736171 AGCTGGGGTAAATAA GCCGCCGC TATT GCAGCGGC GGGTAGGTTAAATTC TERM 747 736191 - 736171 - T 100 -14.7 -2.94232 | opp_overlap 736170 736166, overlap 736170 GCTGGGGTAAATAAG CCGCCGCTA TTG CAGCGGCGG GTAGGTTAAATTCAA Patl_0637 737423 - 736215 - | Rh-like protein/ammonium transporter Patl_0638 737823 - 740459 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 748 740540 - 740566 + F 90 -5.2 -5.5454 | opp_overlap 740540 AGTAAAGCGTATAAA GCCGAACT GAATGAAAACG AGTTCGGC TTTTTCTTTGTTTAG TERM 749 741386 - 741417 + G 77 -10.4 -3.37879 | gap 1, overlap 741389 CTTGATGCATTTAGC TG-GCTAATGCCAAA CTA TTTGGCATTAGTGCA TTCATTAGAGTTGGT TERM 750 741389 - 741413 + G 86 -14.5 -2.60423 | overlap 741386 GATGCATTTAGCTGG CTAATGCCAAA CTA TTTGGCATTAG TGCATTCATTAGAGT Patl_0639 740951 - 741589 + | hypothetical protein Patl_0640 742354 - 741638 - | hypothetical protein Patl_0641 743109 - 742351 - | hypothetical protein Patl_0642 743452 - 743099 - | hypothetical protein Patl_0643 744680 - 743439 - | periplasmic sensor signal transduction histidine kinase Patl_0644 745447 - 744779 - | two component transcriptional regulator TERM 751 746381 - 746371 - g 70 -2.4 -5.0065 | opp_overlap 746372, overlap 746372 TATTGATAAAGAAAA CCGC CTA GTGG GGCGTATTACGATAG Patl_0645 745646 - 747004 + | magnesium transporter TERM 752 747115 - 747103 - g 76 -7.7 -4.33274 | opp_overlap 747102 GTTAGATGAGCAAAA CATGG ATC CCATG AGTTTCACAGGGTTG Patl_0646 747008 - 747874 + | hypothetical protein Patl_0647 749178 - 748009 - | galactokinase TERM 753 748275 - 748253 - G 71 -7.1 -4.13945 | gap 1, opp_overlap 748257 748259 ACCGTGATTTCAAAA TCATCACGCA TAGA TGCGTG-TGA TTCAGCCATCAAACG Patl_0648 750232 - 749183 - | galactose-1-phosphate uridylyltransferase TERM 754 750368 - 750354 - R 100 -11.4 -5.46276 | opp_overlap 750354 AAGAGATACAAAAAA GCCTGC ATA GCAGGC TTAATAAAATCATTA TERM 755 750354 - 750368 + r 82 -11.4 -3.17688 | opp_overlap 750354 AAGAGATACAAAAAA GCCTGC ATA GCAGGC TTAATAAAATCATTA TERM 756 750454 - 750471 + r 70 -3.4 -4.98255 | CAGACCAGGATTTAG GTTACC GGGTAG GGTGAC TTTTTCTAATTCAAC Patl_0649 751902 - 750430 - | aldehyde dehydrogenase TERM 757 750589 - 750568 - G 75 -9.5 -3.54543 | gap 1 ACCGACTCCGCCAAA TGGTGCT-GC ACC GCTAGCACCA GTAATAGGACGGTTC Patl_0650 752940 - 751906 - | arginine N-succinyltransferase TERM 758 752898 - 752917 + g 84 -13.6 -2.87344 | opp_overlap 752883 CAGCAATGTCGTGTA GCACAGCG TAAT CGCTGTGC TGTATCGGGCGAATG argD 754167 - 752962 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 759 753229 - 753240 + g 73 -4.4 -4.8622 | CTTTAGGCCTTCGCG GAAC TGTT GTTC TTTTTGCTTCACACC TERM 760 754357 - 754342 - R 71 -7.6 -3.94773 | opp_overlap 754356 TAGGTAAAAAACCAA GAAGTG TCTT CACTTC GCGCCAGTTAGCTCG Patl_0652 755590 - 754436 - | putative signal transduction protein TERM 761 755459 - 755471 + g 76 -4.1 -5.00616 | opp_overlap 755453, overlap 755453 CGCGAGCAATTCCCG GGTAG GAA CTATC TTTTTTGACGAGGGC Patl_0653 756314 - 755670 - | glutamine amidotransferase of anthranilate synthase Patl_0654 756762 - 757511 + | electron transfer flavoprotein beta-subunit Patl_0655 757537 - 758466 + | electron transfer flavoprotein, alpha subunit Patl_0656 758487 - 760247 + | acyl-CoA dehydrogenase-like TERM 762 760278 - 760301 + F 91 -8 -5.31275 | ATTGTGTTTTCATCA GCCCCCATAG AGAA CTTAGGGGGC TTTTTTATGCTCGAA TERM 763 760719 - 760729 + G 76 -4.6 -5.05228 | CGGCAGGTGTATCGA CGGG GCA CTCG TTTTTATAATTTAGT TERM 764 760772 - 760792 + G 72 -3.2 -4.98522 | opp_overlap 760775, overlap 760773 TAAACTAAAATTTGA AGAGCGTG AAAAG TACGCTCG TTTTTATCTCGCCTT Patl_0657 760422 - 761435 + | AraC family transcriptional regulator TERM 765 761525 - 761543 + T 71 -6 -4.29929 | overlap 761513 CAGGCTTGTAACATA CTGGCTTG GTT CAAGTTAG TTTATTGGATTTCAT TERM 766 761647 - 761690 + T 100 -14.8 -3.57144 | overlap 761624 761650 GCGCGCTTGGCGTGC TAACCGATGCTTGATATACC TTGG GGTACGTTAAGCGTCGGTTA TTTAAAACTAAAAAA TERM 767 761650 - 761687 + T 91 -12.1 -3.92542 | overlap 761624 761647 CGCTTGGCGTGCTAA CCGATGCTTGATATACC TTGG GGTACGTTAAGCGTCGG TTATTTAAAACTAAA TERM 768 761727 - 761698 - T 82 -8.8 -4.18018 | gap 1, opp_overlap 761698 761706, overlap 761699 761706 GTCGGTTATTTAAAA CTAAAAAAGCAGC TCTGT GCTGCTTTTTT-G ATGGATTGGAAATAC TERM 769 761727 - 761699 - T 70 -9 -3.10597 | opp_overlap 761698 761706, overlap 761698 761706 TCGGTTATTTAAAAC TAAAAAAGCAGC TCTGT GCTGCTTTTTTG ATGGATTGGAAATAC TERM 770 761720 - 761706 - T 93 -7.1 -5.46698 | opp_overlap 761698 761706, overlap 761698 761699 TTTAAAACTAAAAAA GCAGC TCTGT GCTGC TTTTTTGATGGATTG TERM 771 761706 - 761720 + T 90 -7.1 -5.18357 | opp_overlap 761706 761698 761699, overlap 761698 TTTAAAACTAAAAAA GCAGC TCTGT GCTGC TTTTTTGATGGATTG Patl_0658 762804 - 761791 - | tryptophanyl-tRNA synthetase Patl_0659 763514 - 762828 - | ribulose-phosphate 3-epimerase TERM 772 763582 - 763596 + H 79 -8.5 -3.98312 | AAAAGTATCAACTTC GCCCC AAAAA GGGGC TTTCGCTTTTATGTG Patl_0660 763830 - 764555 + | hypothetical protein TERM 773 764637 - 764614 - f 100 -13.9 -5.52909 | opp_overlap 764614 GAATATCTAAAAAAA TCCGCTGGC TATATG GCCAGCGGA TTTTTTTGTGTTTAC TERM 774 764614 - 764637 + F 100 -14.6 -5.88197 | opp_overlap 764614 GAATATCTAAAAAAA TCCGCTGGCT ATAT GGCCAGCGGA TTTTTTTGTGTTTAC Patl_0661 764793 - 765098 + | hypothetical protein Patl_0662 765104 - 765301 + | hypothetical protein Patl_0663 766181 - 765348 - | DNA adenine methylase Patl_0664 767749 - 766274 - | hypothetical protein Patl_0665 769003 - 767936 - | 3-dehydroquinate synthase TERM 775 768981 - 768961 - G 76 -5.3 -4.82901 | overlap 768963 TCGGCTGGATAAAAA TGGGGTAGC TAC GCTCACCCA ACTTCACTGTTAATG Patl_0666 769551 - 769036 - | shikimate kinase Patl_0667 771528 - 769786 - | type IV pilus secretin PilQ Patl_0668 772054 - 771521 - | pilus assembly protein, PilQ Patl_0669 772662 - 772051 - | pilus assembly protein, PilO Patl_0670 773244 - 772663 - | fimbrial assembly Patl_0671 774362 - 773232 - | type IV pilus assembly protein PilM TERM 776 774695 - 774667 - g 70 -5.2 -4.42512 | AAAAGACAAAAAATA CACGGTTACCGA AACAA CCGGTGAACGTG GCGAAAGCCGGTTAC TERM 777 775488 - 775460 - g 72 -3 -5.00196 | overlap 775464 GTCGAAAGAATAAAA GTCACTCCACGG GGGAA CCACGTAGTGCC GCTAAGTGACTTTGC TERM 778 775783 - 775751 - g 79 -2.6 -5.36965 | overlap 775753 775754 CAACACTACAAAAAA GACGTCGCAACCAT CAGCT ATGACCGCTACGAC TACCTAACAGAAAAA Patl_0672 774617 - 775849 + | phage integrase Patl_0673 777047 - 776394 - | hypothetical protein TERM 779 776835 - 776860 + g 84 -7.7 -4.8622 | opp_overlap 776834 AAATTCATCAAGCAT TTTCACATAAC GCTC GTAATGTGAAA TTTTTAATTCAAAAA TERM 780 777025 - 776996 - G 82 -3.1 -5.47431 | gap 1, opp_overlap 776996 TCAACACACAAAAAA TCCAAGCAAAAT AATCTGG ATTTTG-TTGGA TATATAAATATACTG TERM 781 777128 - 777142 + r 75 -10 -3.10164 | TGAAGTTCTTGTGTA TGCCCA GCA TGGGCA TTAACTAATGAGTGG TERM 782 777486 - 777472 - R 72 -10 -2.52464 | opp_overlap 777476 GCGGTCGGTAACTCA CCAGTG AGA CACTGG TATACAAGTGTCTCG Patl_0675 778517 - 777783 - | hypothetical protein Patl_0676 779485 - 779075 - | hypothetical protein Patl_0677 780189 - 779593 - | hypothetical protein Patl_0678 780797 - 780204 - | XRE family transcriptional regulator TERM 783 781289 - 781303 + G 73 -7.8 -4.05788 | GCATGGGCAGCACTG CGTGGC AAA GCCATG TTTGATTTACCCCAA Patl_0679 781046 - 781546 + | hypothetical protein Patl_0680 781558 - 781851 + | phage transcriptional regulator, AlpA TERM 784 781866 - 781896 + F 85 -7.6 -5.00616 | overlap 781859 ATTAGGTCCTGCATT GGCAGTGGGT TTTATGGTTTC GCCCACTGCC TTTTTTAACCAAAAA TERM 785 782160 - 782147 - g 76 -2.3 -5.42514 | CCACAAATTAAAAAA GCCCT ATAC ATGGC CGCACACCTAAAACG TERM 786 782222 - 782210 - g 74 -10.5 -3.13299 | opp_overlap 782204, overlap 782208 GTAGCAGACCTAACA GGCGC ACA GCGCC AGCAAGTGTTTATCG Patl_0681 781919 - 782467 + | hypothetical protein Patl_0682 782467 - 783159 + | DNA methylase N-4/N-6 Patl_0683 783170 - 783427 + | hypothetical protein TERM 787 783968 - 783958 - g 79 -3.2 -5.30348 | ACGCAACAAGAAAAA GCCA CAC TAGC TGAGGGTTGTAGCCA Patl_0684 783481 - 783990 + | hypothetical protein TERM 788 784392 - 784380 - g 81 -3.3 -5.30616 | opp_overlap 784382, overlap 784382 TCAGCCAAAGAAAAA GAGCC GAG GGCTA CAACGGGCCAACGGC Patl_0685 783983 - 784516 + | hypothetical protein Patl_0686 784516 - 784758 + | phage protein TERM 789 785203 - 785193 - g 72 -3.2 -5.00616 | GGTTGGTTTAAAAAA GGCA CAA TACC AGTAAACCATAAATT Patl_0687 784755 - 785525 + | hypothetical protein TERM 790 785521 - 785508 - f 71 -5.2 -4.59376 | ATTATGAAACTAAAA GCGG TGAGTG CCGC CTAACAATGCACCAC TERM 791 785566 - 785595 + G 93 -15.9 -3.03771 | gap 1, opp_overlap 785579 TAACCCGTTCATACC GGCCA-TGCACCAA CAC TTGGTGCAGTGGCC TGTTCGCACGTCTGG TERM 792 787481 - 787457 - g 77 -3.6 -5.22289 | gap 1 GACGAAATAGAAAAA TGCC-GTTTCT GGGC AGACACAGGCA AGTGGGACAAATTCA TERM 793 787728 - 787712 - g 73 -7.9 -4.09685 | opp_overlap 787716 787716 CTTGACGCTTTAAAA GCAGCGC GCA GCGGTGC GTCGTCTTTTGATTC Patl_0688 785528 - 788209 + | bacteriophage replication gene A Patl_0689 788855 - 788244 - | hypothetical protein TERM 794 788736 - 788746 + g 86 -4 -5.52384 | AAAATTACCTAGTGA TGAA AAC TTCA TTTTTTTGATAAAGG TERM 795 789016 - 788959 - H 83 -12.3 -2.7794 | overlap 788958 788961 ATCTTAATAAAAATT CAGACTATCGTTTATCACATATCAATA TTCC CATTGAAATGTGGTAAACGATACACTG AATATAAATTGAGCG Patl_0690 789096 - 789674 + | hypothetical protein Patl_0691 789735 - 790508 + | hypothetical protein Patl_0692 790808 - 790563 - | phage transcriptional activator, Ogr/delta TERM 796 791068 - 791089 + G 73 -4.5 -4.91084 | overlap 791048 ACAGCTATCACTAGC TATTCCGAT TGTA ATTGGAGTA TTTTCTTGTTGGCTA Patl_0693 790979 - 791593 + | hypothetical protein Patl_0694 792630 - 791614 - | PBSX family phage portal protein Patl_0695 794364 - 792631 - | hypothetical protein TERM 797 793810 - 793822 + g 72 -4.9 -4.62471 | opp_overlap 793810 AGAGCGCGAAGCAGA CAAAA ATA TTTTG TTTTTGCCGGTTAAA TERM 798 795280 - 795318 + G 100 -14 -4.07568 | gap 1, opp_overlap 795282 AGTGGTGATGGTGAA GAC-CCTGCACCAGGTG ACGAAA CACCTGGTGCAGCCGTC TTTTCAAACGAGCAA TERM 799 795315 - 795282 - g 75 -11 -3.04144 | opp_overlap 795280 TGGTGATGGTGAAGA CCCTGCACCAGGTG ACGAAA CACCTGGTGCAGCC GTCTTTTCAAACGAG Patl_0696 794593 - 795474 + | phage capsid scaffolding TERM 800 795632 - 795608 - g 82 -12.9 -2.88249 | overlap 795622 CATACGGTGTAGACA GTGTCGCTGAA ACA TTCAGCGCCAC CCCTGAAGTACACCA Patl_0697 795529 - 796563 + | P2 family phage major capsid protein TERM 801 796632 - 796583 - f 90 -12.5 -3.48288 | gap 1, opp_overlap 796577 796584 796601, overlap 796575 796584 796601 TAACCCACAGCACAA GTGTGCTTTCATCAAAAAGCCTGA TCT TCAGGCTTTTTTA-GAAAACACAT TTCACCGTGAACAAC TERM 802 796584 - 796631 + F 95 -13.8 -3.57144 | gap 1, opp_overlap 796575 796583 796584 796601, overlap 796577 796601 AACCCACAGCACAAG TGTGCTTTCATCAAAAAGCCTGA TCT TCAGGCTTTTTTA-GAAAACACA TTTCACCGTGAACAA TERM 803 796631 - 796584 - f 100 -16 -2.68491 | gap 1, opp_overlap 796577 796584 796601, overlap 796575 796583 796601 AACCCACAGCACAAG TGTGCTTTCATCAAAAAGCCTGA TCT TCAGGCTTTTTTA-GAAAACACA TTTCACCGTGAACAA TERM 804 796615 - 796601 - f 93 -10 -4.72272 | opp_overlap 796584 796601, overlap 796584 796583 TGCTTTCATCAAAAA GCCTGA TCT TCAGGC TTTTTTAGAAAACAC TERM 805 796601 - 796615 + F 93 -10 -5.00616 | opp_overlap 796601 796584 796583, overlap 796584 TGCTTTCATCAAAAA GCCTGA TCT TCAGGC TTTTTTAGAAAACAC Patl_0698 796658 - 797503 + | hypothetical protein TERM 806 797679 - 797666 - g 74 -8.1 -3.91564 | CACAATAACCAACAA CGGGT TTTT ACCCG ACGTGAGCATAGGCG TERM 807 797948 - 797935 - g 72 -8.1 -3.71284 | TCCGCAGGAACATAA GCGTG ACCA CACGC AAAGTCAGTGACGTA Patl_0699 797613 - 798068 + | prophage PSPPH06, putative head completion/stabilization protein Patl_0700 798068 - 798526 + | prophage PSPPH06, putative tail protein TERM 808 798713 - 798685 - g 78 -5.9 -4.89063 | overlap 798687 GTACCCAAAAACAAA TCGACGGCAAGCC CAT GGCTTCACGCCAA AAAGGCAGCGCAAAA Patl_0701 798519 - 799208 + | hypothetical protein TERM 809 799707 - 799691 - g 79 -8 -4.42788 | CTTAACCGCACAAAA CGCCAT TTTAG ATGGCG TAGCAGGTCACCGTG Patl_0702 799224 - 800330 + | hypothetical protein Patl_0703 800334 - 800783 + | prophage PSPPH06, putative tail tube protein TERM 810 800828 - 800814 - g 73 -2.1 -5.2166 | overlap 800825 800826 CAACAACTTAAAAAA GCAAT GGCAA ATCGC GGCTATACGTTGTTT TERM 811 801314 - 801284 - g 70 -9 -3.35011 | overlap 801282 801300 AGACCCAAACGAATA CGCCATGCTGATAA ACC TGATCCGCATAGCG GCCAATAAACACGGT Patl_0704 800784 - 801383 + | hypothetical protein Patl_0705 801380 - 801865 + | hypothetical protein Patl_0706 801877 - 802167 + | hypothetical protein Patl_0707 802206 - 802499 + | hypothetical protein TERM 812 802486 - 802475 - f 70 -3.6 -5.00616 | GTTTGTTGTAAAAAA GCGC AACA GCAC GCCAAGCAAGTAGAA Patl_0708 802520 - 802660 + | hypothetical protein TERM 813 803401 - 803387 - g 73 -10 -3.41051 | CTAGGGCTATTACAA GCCACT ATG AGTGGC AGCGAAGCGGGCACA TERM 814 804276 - 804263 - g 88 -3.7 -5.74122 | GATGACATAAAAAAA GCCGC TGGG GTGGC AATTGAATGGATAAG Patl_0709 802724 - 804853 + | TP901 family phage tail tape measure protein TERM 815 804996 - 804983 - g 75 -6.7 -4.46742 | AAACAAATGAAGAAA TAGGC GTAT GCCTA ATCGAAGCGGCGGCC Patl_0710 804853 - 805188 + | hypothetical protein Patl_0711 805202 - 805984 + | hypothetical protein TERM 816 806920 - 806930 + G 79 -8.2 -4.3467 | GGATAGCGATTCTAA CGCC CAA GGCG TTTTCATGTACCCAT TERM 817 807323 - 807351 + G 73 -7.5 -4.19238 | overlap 807324 807326 GTTTCAGGGGTGTAT GCACTACCTTTTG CGT CAAAAGGTAATGA TTTTACAATTCAAAA TERM 818 807324 - 807350 + G 75 -11 -3.11222 | overlap 807323 807326 TTTCAGGGGTGTATG CACTACCTTTTG CGT CAAAAGGTAATG ATTTTACAATTCAAA Patl_0712 805988 - 807892 + | hypothetical protein Patl_0713 807892 - 808287 + | hypothetical protein TERM 819 808682 - 808666 - g 77 -9.4 -3.86194 | AAGCCCTGCGATAAA CGGCGT TAATT ACGCCG TGGTAACAACCGAAC Patl_0714 808280 - 809443 + | uncharacterized phage Mu protein GP47-like protein Patl_0715 809440 - 809970 + | putative bacteriophage protein Patl_0716 809960 - 810709 + | hypothetical protein Patl_0717 810706 - 811911 + | hypothetical protein TERM 820 812384 - 812355 - g 71 -10.1 -3.13432 | gap 1, opp_overlap 812350, overlap 812335 812362 GTGAAGAGTATTTAA CCGTAAACATTGCC AAC GGCCATGT-TACGG GAGAATTTCAGTTTG Patl_0718 811913 - 812518 + | hypothetical protein Patl_0719 812536 - 813276 + | hypothetical protein Patl_0720 813276 - 813812 + | hypothetical protein TERM 821 813883 - 813897 + G 71 -7 -4.05714 | CTAGCATTGAACTGG GCAGGC AAA GCCAGC TTTATCATTGGCAGT Patl_0721 813802 - 814479 + | hypothetical protein TERM 822 814960 - 814939 - g 72 -5.1 -4.68724 | GCATTGAAGATAAAA GCATCAACC GATT AGTTGAAGC ACTACAGGACGTGCA TERM 823 815055 - 815041 - g 76 -4.2 -5.07486 | overlap 815042 TAGGCGCAACAAAAA CCATTG AAG CCATGG GCGCAATGAAGCTAA Patl_0722 814473 - 815438 + | hypothetical protein TERM 824 815505 - 815494 - f 74 -4.4 -4.83677 | opp_overlap 815499 815500 815502, overlap 815500 AAAAGAAAACCAAAA CCAA AATA TTGG GCCATAAATGGCCCG TERM 825 815499 - 815524 + F 77 -8.3 -3.84825 | opp_overlap 815494 815500, overlap 815500 815502 AAAACCAAAACCAAA ATATTGGGCCA TAAA TGGCCCGATAA TTTCCTGTGCGTGAA TERM 826 815500 - 815523 + F 81 -11.8 -2.90573 | opp_overlap 815494 815500, overlap 815499 815502 AAACCAAAACCAAAA TATTGGGCCA TAAA TGGCCCGATA ATTTCCTGTGCGTGA TERM 827 815523 - 815500 - f 93 -9.6 -4.74084 | opp_overlap 815500 815499 815502, overlap 815494 AAACCAAAACCAAAA TATTGGGCCA TAAA TGGCCCGATA ATTTCCTGTGCGTGA TERM 828 815502 - 815521 + F 75 -10 -3.00138 | opp_overlap 815494 815500, overlap 815500 815499 ACCAAAACCAAAATA TTGGGCCA TAAA TGGCCCGA TAATTTCCTGTGCGT TERM 829 815979 - 815989 + F 73 -6.8 -4.20074 | GCTTTTGTCGTCGGT GTCG TCA CGAC TTTTGCCCTGTATTT TERM 830 816533 - 816484 - g 76 -8.7 -4.15565 | gap 1 TTTACTACGGCAAAA CGGTAAACCAGCTAACGCTTGC ACAAATG GCAACCATC-GCTGGGTTACCG CAAGCACCATCAGTC TERM 831 816712 - 816681 - g 81 -3.8 -5.44721 | gap 1, opp_overlap 816684, overlap 816663 816683 816684 ATTACGGCAAAAAAA CATGGTGCCGA-AAT CGA ATTCTCAGCACCTTA TTTGGCGGATTTAAT TERM 832 817731 - 817742 + G 78 -5.8 -4.8622 | overlap 817698 817696 817695 GCACTGTCCGTGATT GCCA ATGG TGGC TTTTTAATTCAGCCG TERM 833 818075 - 818062 - g 72 -5.3 -4.61231 | GCACAGCCGTAAAAA CCAAT GGTA ATTGG AATAAGAAGACCTAT Patl_0723 816009 - 818609 + | 1A family penicillin-binding protein TERM 834 818679 - 818730 + F 81 -2.5 -5.66989 | gap 2 TGTTTTCGTCAGAAA TGCTGCTAAGTG-AGTCGGT-GTGT ATTG ATATTACCGCTTGCACTTATCAGCA TTTTTTTAATATTTC TERM 835 818897 - 818880 - g 71 -7 -4.15044 | CCCTTGCTCAATAAA GGCAGT GCGTTT ACTGCC CAAGAACGCGTAGCG Patl_0724 818799 - 820493 + | malate dehydrogenase TERM 836 820497 - 820479 - f 86 -11 -3.86015 | opp_overlap 820479 820478 TACCGCCCGTATAAA CGCGTCAG TAT CTAACGCG ATTTATGTATTGGGT TERM 837 820517 - 820558 + F 93 -7.9 -5.40464 | gap 1, opp_overlap 820517 820518 ATGTATTGGGTGAAA CGCCGCACATATTGCG-CCG CAT TGGTCGTATAAGGTGCGGCG TTTTTGTTTGTGCTC TERM 838 820869 - 820846 - f 73 -10.3 -2.76261 | overlap 820845 CGGTAAGGGTGAAAG GGTGCGGTA AGAGCG CACCGCACC ACTGGTAACAGTGTG TERM 839 821038 - 821080 + F 90 -12.4 -3.66178 | gap 2, opp_overlap 821032 821049 ATCGACCAACTCCAC CTTTTCA--CTAACCGCTTG TATAT CAAGCGGTTAGCATGAAAAG TTTCAGATTGGCACA TERM 840 821067 - 821049 - f 75 -10.3 -3.14564 | opp_overlap 821038, overlap 821032 CCACCTTTTCACTAA CCGCTTG TATAT CAAGCGG TTAGCATGAAAAGTT TERM 841 821164 - 821142 - f 75 -5.7 -4.75404 | gap 1 AAATTCCAGTAAAAA CATTAC-GCA CTGG TGCCGTAATG AAAACCGTCAAAAAG Patl_0725 821162 - 823021 + | phage integrase TERM 842 823282 - 823267 - g 71 -7.6 -3.89614 | opp_overlap 823266 823269, overlap 823257 TGTAACCGCTACAAA TATCGC AGCA GCGATA AATTCCTTGGATAAA Patl_0726 823247 - 824323 + | Type II site-specific deoxyribonuclease Patl_0727 825466 - 824348 - | DNA-cytosine methyltransferase Patl_0728 826650 - 826174 - | hypothetical protein Patl_0729 828674 - 826668 - | AAA ATPase, central region Patl_0730 829588 - 828671 - | phage integrase Patl_0731 830452 - 829739 - | hypothetical protein TERM 843 830149 - 830169 + g 93 -6.2 -5.75478 | ATCGCGCAGCTTCGA GGGATAGA TCAGT TCTATCTC TTTTTTTATCTAATT TERM 844 832620 - 832608 - g 72 -4.9 -4.59511 | AAGACGTTCTAAAAA GTTAA AGG TTAAC GCTAAAGATGCACGA Patl_0732 830725 - 833514 + | UvrD/REP helicase Patl_0733 833783 - 835168 + | hypothetical protein TERM 845 835531 - 835517 - g 72 -2.8 -4.9218 | overlap 835518 TAGTTATGATAAAAA CTACAG CGA CTGTAC ATTCAAAATCATTCA Patl_0734 835155 - 835778 + | hypothetical protein TERM 846 835983 - 836009 + F 79 -10.8 -3.16667 | opp_overlap 835982 835985, overlap 835980 835979 835985 835987 ACCTAATTTCAATAT TACTCCGCCTGA TCA TCAGGCGGTGTC TACTTTCATTTTTTA TERM 847 836007 - 835985 - f 90 -13.4 -2.76046 | opp_overlap 835985 835983 835980 835979 835987, overlap 835982 CTAATTTCAATATTA CTCCGCCTGA TCA TCAGGCGGTG TCTACTTTCATTTTT TERM 848 835985 - 836007 + F 91 -13.4 -3.11096 | opp_overlap 835982 835985, overlap 835983 835980 835979 835987 CTAATTTCAATATTA CTCCGCCTGA TCA TCAGGCGGTG TCTACTTTCATTTTT TERM 849 835987 - 836005 + F 100 -14.6 -3.08901 | opp_overlap 835985 835982, overlap 835985 835983 835980 835979 AATTTCAATATTACT CCGCCTGA TCA TCAGGCGG TGTCTACTTTCATTT Patl_0735 836214 - 837404 + | PAS/PAC sensor signal transduction histidine kinase Patl_0736 837951 - 837355 - | TetR family transcriptional regulator TERM 850 837870 - 837886 + g 71 -7.3 -4.07687 | CGATTTGGTCCATAG TGGTGTG TTC TACACCA TTTTCAAAGAACAAT TERM 851 838024 - 838041 + H 87 -4.9 -5.39221 | opp_overlap 838024 GGTATCGTAACTAAA GTAGACT TGAT AGTTTAC TTTTTTGCTTCTTAT Patl_0737 838095 - 839189 + | Zn-dependent hydrolase of the beta-lactamase fold TERM 852 839317 - 839284 - T 100 -14.7 -5.71712 | opp_overlap 839281 CGGGACATAAAAAAA GCCCGCCAGAACA AGTTTAAG TATTCTGGCGGGC TGATGCTATCTAGCG Patl_0738 842504 - 839337 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 853 840310 - 840368 + g 74 -8.3 -3.91541 | gap 2, overlap 840311 CGTTCACGATCAATA TCTGCGTACAGTTGCGGTGTGCTGGTTTC AAA GAAGCT-GAACACCGCAGTGGTA-GCAGG TTCTTGATTTGCTGC TERM 854 840311 - 840367 + g 70 -9.6 -2.94202 | gap 2, overlap 840310 GTTCACGATCAATAT CTGCGTACAGTTGCGGTGTGCTGGTTTC AAA GAAGCT-GAACACCGCAGTGGTA-GCAG GTTCTTGATTTGCTG TERM 855 840497 - 840463 - G 73 -11.4 -2.65532 | overlap 840459 840476 840478 ATCATTTTAAAGCCA CCGCCATTACCAATAC CGC GCACTGGTGGTGGCGG AATAACGACGACATT Patl_0739 843632 - 842517 - | RND family efflux transporter MFP subunit TERM 856 842965 - 842978 + g 72 -6.7 -4.25681 | overlap 842958 GGGTTGGACGCACTA CGTGA GCTT TCACG TTTGTTGGATTGGCT Patl_0740 845463 - 843979 - | hypothetical protein TERM 857 846022 - 846012 - g 72 -5.4 -4.4009 | GTTGACCGGAGAAAA TCAG ACC CTGA AGGCTTGGCAGAGCA Patl_0741 845676 - 846164 + | putative thioredoxin family protein TERM 858 846392 - 846366 - T 93 -10.1 -4.99043 | GTGGGAGAAACAAAA GCCGCAGGG TTGTTATCC CCCCGCGGC CTTACACTTGATGAG Patl_0742 846901 - 846470 - | OsmC-like protein Patl_0743 847944 - 847294 - | TetR family transcriptional regulator TERM 859 848024 - 848046 + H 75 -10 -3.25823 | opp_overlap 848024 848037 848039 848041 ATTGAACGATTAGAA GTGTAGTGTA ATA TACATTACAC TTAATGTAACGCACA TERM 860 848343 - 848330 - g 70 -5.3 -4.46615 | overlap 848333 848338 GATTACCAAGCAAAA TTAGC ACAG GCTAA CGCTGAGCTTAGCGT Patl_0744 848078 - 849169 + | secretion protein HlyD Patl_0745 849274 - 850827 + | EmrB/QacA family drug resistance transporter TERM 861 850855 - 850886 + F 70 -8 -3.64703 | gap 1, opp_overlap 850841 850855 850856 850868, overlap 850856 TGCGGCCTTCGCAAA GCGGCCTACGCAAGG CGC CCTT-CGTAGGGCGG TTTCGATAAAGCCAC TERM 862 850856 - 850885 + F 80 -11.5 -2.78679 | gap 1, opp_overlap 850841 850855 850856 850868, overlap 850855 GCGGCCTTCGCAAAG CGGCCTACGCAAGG CGC CCTT-CGTAGGGCG GTTTCGATAAAGCCA TERM 863 850885 - 850856 - f 79 -11.5 -2.71712 | gap 1, opp_overlap 850856 850855, overlap 850841 850855 850868 GCGGCCTTCGCAAAG CGGCCTACGCAAGG CGC CCTT-CGTAGGGCG GTTTCGATAAAGCCA Patl_0746 850992 - 851579 + | peptide methionine sulfoxide reductase TERM 864 851605 - 851632 + T 100 -20 -4.03141 | opp_overlap 851605 GTGGCAATCAAAAAA GGCGTAACCCGA GTAG TCGGGTTACGCC TTGTTTAATCATAGT TERM 865 851632 - 851605 - T 100 -20 -5.26875 | opp_overlap 851605 GTGGCAATCAAAAAA GGCGTAACCCGA GTAG TCGGGTTACGCC TTGTTTAATCATAGT Patl_0747 852799 - 851672 - | carboxynorspermidine decarboxylase TERM 866 852214 - 852235 + g 70 -2.3 -5.06414 | AATTAATCCATTTAA TTTGCTCAA AGTA TTGGCCAAA TTTTTCTTCCACCGC TERM 867 852853 - 852836 - R 82 -8.4 -4.14764 | CGCTAAATAAGTAAA GGGCCA AATAAA TGGCCC TAAAATGCTGATGAT Patl_0748 854101 - 852899 - | saccharopine dehydrogenase TERM 868 853701 - 853714 + g 71 -3.8 -4.7657 | opp_overlap 853701 CCACTACCGAGTAAC GCAG TTAAGC CTGC TTTTTCGAATTTTTC Patl_0749 854375 - 854626 + | membrane protein TERM 869 854702 - 854675 - T 87 -6.3 -5.1861 | GGGACGATCAAAAAA GCGCCTTACCC GGACAA GAATAAGACGC TTTCGTTTGAAGAGC Patl_0750 855519 - 854956 - | ATPase/kinase involved in NAD metabolism Patl_0751 856208 - 855570 - | nicotinamide mononucleotide transporter PnuC Patl_0752 857311 - 856205 - | kelch repeat-containing protein Patl_0753 858355 - 857399 - | D-cysteine desulfhydrase, PLP-dependent enzyme Patl_0754 859446 - 858394 - | diguanylate cyclase TERM 870 858591 - 858602 + g 88 -5.8 -5.59357 | opp_overlap 858591 GAATCGACTGCATAA TGGC ATCA GCCA TTTTTTTGCTCTGCT TERM 871 859123 - 859105 - G 71 -7.4 -3.89617 | ATTCACAAACGCAAA CCTGAGTC TTG GACTAAGG GCAAAAAGCGCGCTG Patl_0755 860253 - 859543 - | ZIP zinc transporter family protein TERM 872 859746 - 859736 - G 72 -8.2 -3.74658 | AAATAACCACTTAAA CCCG CCG CGGG ACCAAATAAAGCTAG TERM 873 860044 - 860032 - G 100 -7.7 -5.5112 | GCCAGCAATAAAAAA CACCA AGC TGGTG GTAAGGCTTAAGTTA Patl_0756 860506 - 860895 + | hypothetical protein Patl_0757 860913 - 862352 + | MscS mechanosensitive ion channel TERM 874 862397 - 862409 + T 73 -7.7 -3.90112 | GGTAGAGCATGTTGT CAGGT GTA ACCTG TTTAGTTGACGAAAC aceK 864144 - 862411 - | bifunctional isocitrate dehydrogenase kinase/phosphatase protein TERM 875 865052 - 865029 - g 76 -4.4 -5.08824 | opp_overlap 865029 865040 865049 CCTCTAGCGAAAAAA GCCCATGGGC TTGA ACCCAACGGC GTTCGTCGTATTGAA TERM 876 865089 - 865074 - g 91 -7.6 -5.10461 | CGTATTGAACAAAAA TTGCCA GAAT TGGCAA ATGAGCTTAAAGGAA Patl_0759 864453 - 865283 + | oxalate/formate antiporter Patl_0760 865666 - 866388 + | hypothetical protein Patl_0761 869055 - 866410 - | LuxR family transcriptional regulator TERM 877 868783 - 868773 - G 73 -4 -4.84353 | AGAAAGCAAAATAAA TACT GGT AGTA GAAGCCCCGTTTTCT TERM 878 869589 - 869601 + G 79 -4.1 -5.22312 | TAACGATGTTGCTTG CTACT GTC AGTGG TTTTTTGGTCTCCGT Patl_0762 869318 - 869788 + | putative transmembrane protein Patl_0763 869785 - 870072 + | hypothetical protein Patl_0764 870563 - 870147 - | BLUF domain-containing protein TERM 879 871310 - 871323 + G 78 -5.2 -5.08824 | CGTGCGCTACATTTA CCCG TACTAC CGGG TTTTTTGAATAAAAC TERM 880 871692 - 871677 - g 77 -9 -3.85899 | AGCATAAGGAAAAGA TGGCCA GTAT TGGCCA AATGGCAGCGGGTAT Patl_0765 870665 - 872470 + | histidine kinase TERM 881 873136 - 873152 + G 72 -5.1 -4.57837 | TTGTACACGCCAGAG GTTATGG TGC CCATGGC TTTTTCGAAACATAT TERM 882 873212 - 873187 - g 75 -11.2 -3.09834 | CACTCGATGACCTAA CCTGCGCTGA CATTTT TCAGCGCAAG GGCGAGAAAACACCC TERM 883 873281 - 873295 + G 74 -11.4 -2.7634 | overlap 873280 ATCGCCTGACTTGGC CCGCGA CGT TCGCGG CTTTGCAGTCAAATT TERM 884 874457 - 874438 - g 72 -6.4 -4.26327 | overlap 874435 TAGGTATTAAAACAA TGCCTGAG CCTG CTGAGGCA GCGATGAAAACACGT Patl_0766 872901 - 874967 + | catalase TERM 885 875023 - 875000 - f 81 -11.8 -2.63112 | AAATCTTGTAGATGA CCTTTACTGG CGCG CCAGCAAAGG CATGAAAAAATCAAA TERM 886 875070 - 875034 - f 100 -17.5 -5.19261 | opp_overlap 875044, overlap 875035 875044 AAAGGCATGAAAAAA TCAAAAAAAAGGCCGGA TAG TCCGGCCTTTTTTCTGC CAGTTATATGCGCTG TERM 887 875069 - 875035 - f 100 -21 -3.6993 | opp_overlap 875044, overlap 875034 875044 AAGGCATGAAAAAAT CAAAAAAAAGGCCGGA TAG TCCGGCCTTTTTTCTG CCAGTTATATGCGCT TERM 888 875044 - 875060 + F 100 -13.7 -5.25803 | opp_overlap 875035 875034 875044 AAAAATCAAAAAAAA GGCCGGA TAG TCCGGCC TTTTTTCTGCCAGTT TERM 889 875060 - 875044 - f 100 -13.7 -6.11019 | opp_overlap 875044, overlap 875035 875034 AAAAATCAAAAAAAA GGCCGGA TAG TCCGGCC TTTTTTCTGCCAGTT TERM 890 875422 - 875409 - f 75 -2.5 -5.19328 | ACTGTAGAATAAAAA TTAAA CAGC TTTAA ACGTAAAAAAATACC TERM 891 876858 - 876880 + G 79 -10.6 -3.53224 | opp_overlap 876870 TGGTAGGCTCTGAGG GGGTTAACTC AAC GAGTCAACCC TTTGAGCCGAGCATC Patl_0767 875474 - 878125 + | TonB-dependent receptor TERM 892 878191 - 878170 - f 100 -14.5 -3.29626 | opp_overlap 878170 CAATACGCATATGAA GGCAAGCCT ACCT AGGCTTGCC TTTTTTATGTACGGG TERM 893 878170 - 878191 + F 100 -14.5 -5.36441 | opp_overlap 878170 CAATACGCATATGAA GGCAAGCCT ACCT AGGCTTGCC TTTTTTATGTACGGG Patl_0768 878245 - 880236 + | sulfotransferase Patl_0769 881620 - 880886 - | short-chain dehydrogenase/reductase SDR TERM 894 881322 - 881336 + g 84 -7.8 -4.77438 | TCCGTCTCTTCACTT TGTGCC ACG GGCGCA TTTTTCATGATCCCT TERM 895 882688 - 882672 - g 78 -6.5 -4.72486 | GATAAAGGCCAAAAA GCTGTAC GAA GTGCAGC CACATATTAGTCTCA Patl_0770 882028 - 883005 + | TRAP dicarboxylate transporter, DctP subunit TERM 896 883101 - 883113 + G 74 -3.3 -5.00196 | AGCTTAGTTATATTT TGGGG ACT CGCCA TTTTATTGTTTGCAC TERM 897 883496 - 883484 - g 77 -9.1 -3.91897 | opp_overlap 883467, overlap 883468 TGTTTTAGTGATAAA GCACC GTT GGTGC TCAATGCGTCAGGCA Patl_0771 883008 - 883532 + | tripartite ATP-independent periplasmic transporter DctQ TERM 898 884265 - 884252 - g 70 -9.5 -3.06183 | opp_overlap 884242 TTTACTGCGACTGAA GCGGC TATT GCCGC CAGCGCATATGCTCT Patl_0772 883535 - 884815 + | TRAP dicarboxylate transporter, DctM subunit Patl_0773 884901 - 885614 + | AraC family transcriptional regulator TERM 899 885649 - 885672 + F 73 -6.8 -4.16837 | AAGCCTTGCGTCTTT TTGGCAAAGT AATC AGTTTGCCAA TTGTTTATGCTTCTC TERM 900 885919 - 885909 - g 72 -5.4 -4.54727 | CGTCGTAAACTAAAA GCTA ATG TAGC CAACCTGTTGCAACA Patl_0774 885726 - 886691 + | hypothetical protein TERM 901 886768 - 886739 - f 71 -6.7 -3.9941 | opp_overlap 886734 886739, overlap 886734 CTTTCTAGAATTAAA TTTGAAATTTAAT ATAT ATGAAATTTCAAA TGTGATGCGATACTG Patl_0775 887034 - 888035 + | PEP motif-containing protein TERM 902 888097 - 888124 + T 91 -10.6 -4.36914 | gap 1, opp_overlap 888098, overlap 888098 TGCAAAACATAAGAA ACCGCTAGCGTCA CTA TG-CGCTAGCGGC TTTTATAGAGAAGCA TERM 903 888098 - 888123 + T 95 -14.1 -3.21934 | gap 1, opp_overlap 888098, overlap 888097 GCAAAACATAAGAAA CCGCTAGCGTCA CTA TG-CGCTAGCGG CTTTTATAGAGAAGC TERM 904 888123 - 888098 - T 100 -14.1 -4.57063 | gap 1, opp_overlap 888098 888097 GCAAAACATAAGAAA CCGCTAGCGTCA CTA TG-CGCTAGCGG CTTTTATAGAGAAGC Patl_0776 890079 - 888142 - | DNA topoisomerase III TERM 905 888398 - 888419 + g 74 -3.6 -5.09225 | overlap 888382 888379 GCCTTGCCCGTGGGT GTGGCGTG TATTTC CTTGCCAC TTTTTTGCATAAACT TERM 906 890475 - 890465 - g 76 -4.6 -4.93365 | TTGCAGAATCAAAAA GCGG ATA CCAC ACTAGCAAAATCAGC TERM 907 891094 - 891108 + G 72 -6.4 -4.2828 | opp_overlap 891094 891095, overlap 891095 TGCCAAAGAGCATAA TGGTAG CCG CTACCG TTTTAGTGACTGGCG Patl_0777 890327 - 892759 + | twin-arginine translocation pathway signal TERM 908 892769 - 892797 + F 73 -6.7 -4.28656 | opp_overlap 892768, overlap 892771 892793 CGCTAAGCAAAATTG TCGTCGTGTCTTT TGA AAAGGCACGACTC TTTTGCGTCTTCAAT TERM 909 892771 - 892795 + F 95 -13.7 -3.741 | opp_overlap 892768, overlap 892769 892793 CTAAGCAAAATTGTC GTCGTGTCTTT TGA AAAGGCACGAC TCTTTTGCGTCTTCA TERM 910 893082 - 893128 + F 83 -11.7 -3.24694 | opp_overlap 893097, overlap 893079 893077 GTTGACAAGTGTTAC TCGTTTTTGGGAATATGCCCT CCATT GGGGCATATGCCCAAATAAGA TATCTTGTACTTGTT TERM 911 893345 - 893357 + G 77 -3.3 -5.14477 | opp_overlap 893346, overlap 893346 CCAAGCATAAATTAA AGGGT TGG ACCCA TTTTTTAGGTCTGTA TERM 912 893356 - 893346 - g 71 -6.8 -4.17789 | opp_overlap 893346 893345 CAAGCATAAATTAAA GGGT TGG ACCC ATTTTTTAGGTCTGT TERM 913 894279 - 894298 + G 76 -8.6 -4.08064 | GAACCTGTATCGTGC TGGCTTGG CTGC TCAAGCCA TTTTCAAAAACCATT TERM 914 894760 - 894736 - g 72 -8.5 -3.72324 | opp_overlap 894736 894736, overlap 894739 GAGCTTCATCAAGAA GAGCAGGCTCG AAA CGAACCTGACC CTGTTATACATATAT TERM 915 894757 - 894739 - g 73 -11 -2.66249 | opp_overlap 894736 894736, overlap 894736 CTTCATCAAGAAGAG CAGGCTCG AAA CGAACCTG ACCCTGTTATACATA Patl_0778 893269 - 894993 + | transmembrane prediction Patl_0779 895003 - 896505 + | mannitol dehydrogenase-like TERM 916 896626 - 896582 - T 83 -12.1 -3.24456 | opp_overlap 896584 896586, overlap 896583 ACAGATGAGCATTAA CGCGCGGATGAGAGCACAGTG AAC CACTGAGCTCTCATCCGTATT TTTTATGGGCCTACT TERM 917 896625 - 896583 - T 95 -15.6 -2.54192 | opp_overlap 896584 896586, overlap 896582 CAGATGAGCATTAAC GCGCGGATGAGAGCACAGTG AAC CACTGAGCTCTCATCCGTAT TTTTTATGGGCCTAC TERM 918 896584 - 896624 + T 100 -19.1 -5.252 | opp_overlap 896583 896582, overlap 896586 AGATGAGCATTAACG CGCGGATGAGAGCACAGTG AAC CACTGAGCTCTCATCCGTA TTTTTTATGGGCCTA TERM 919 896586 - 896622 + T 100 -23.9 -4.25873 | opp_overlap 896583 896582, overlap 896584 ATGAGCATTAACGCG CGGATGAGAGCACAGTG AAC CACTGAGCTCTCATCCG TATTTTTTATGGGCC Patl_0780 898076 - 896649 - | hypothetical protein TERM 920 896947 - 896968 + g 81 -5.3 -5.2197 | gap 1, opp_overlap 896963, overlap 896963 AGGGGCAACTGAATC TCTTGCTGAT CAG AT-AGCAAGA TTTTTGCTTTTTCTG TERM 921 896963 - 896975 + g 73 -4.1 -4.85599 | opp_overlap 896963, overlap 896947 CTTGCTGATCAGATA GCAAG ATT TTTGC TTTTTCTGCACTGCG TERM 922 898618 - 898628 + G 77 -6.8 -4.42464 | opp_overlap 898617 898614 898618 TTTCCCATTAACAAC TCCC CTA GGGA TTTATTTGAAGCATT Patl_0781 898288 - 899181 + | hypothetical protein TERM 923 899193 - 899226 + T 100 -15.3 -4.371 | opp_overlap 899201 TTAACGCCCAGTTTA GCCAACAAGCACACC TAAT GGTGGGCATGTTGGC TTTTAATCTGCTCAG Patl_0782 899818 - 899207 - | hypothetical protein Patl_0783 901406 - 899820 - | hypothetical protein TERM 924 901549 - 901523 - R 80 -10.2 -3.67498 | CAAGTGTTAAGACAA TGCAGGAAGTAA CGT TGACTCCCTGCA TGCCCATATGGAGGT Patl_0784 903071 - 901572 - | metallophosphoesterase TERM 925 902089 - 902111 + g 72 -8.4 -3.72968 | GACGAGAAGATAGGG TGGTGCATCG TCA CGATACGCCA TTTCGCTGTGCTAGT Patl_0785 905700 - 903211 - | TonB-dependent receptor, plug Patl_0786 907022 - 905871 - | putative FecR TERM 926 906804 - 906788 - G 70 -5.1 -4.431 | TATTGAGCCACAAAA CAAACTC TTC GCGTTTG TCTGCGCTGGTATGT Patl_0787 907693 - 907019 - | ECF subfamily RNA polymerase sigma-24 factor TERM 927 907902 - 907915 + r 83 -9.5 -3.84266 | opp_overlap 907902 ATGGATATAAAAAAA GCCGG CAAG CCGGC TTTGATGTAAAGTGT TERM 928 907915 - 907902 - R 100 -9.5 -5.72616 | opp_overlap 907902 ATGGATATAAAAAAA GCCGG CAAG CCGGC TTTGATGTAAAGTGT Patl_0788 908778 - 907936 - | hypothetical protein TERM 929 908465 - 908487 + g 76 -12 -2.56596 | opp_overlap 908465, overlap 908461 TTAAGCACGGACGAA CCACTGGCTG TAA CGGCTAGTGG TGAGTTGATGGCACA TERM 930 909112 - 909139 + r 72 -10 -2.68544 | opp_overlap 909119, overlap 909108 909119 CTTATTTTCAGGCAT AAAAAAAGTCGG CGAA CCGACTTTTTTA TGAATTGTTAATATT TERM 931 909132 - 909119 - R 100 -8.1 -5.64274 | opp_overlap 909112 909108 909119 TCAGGCATAAAAAAA GTCGG CGAA CCGAC TTTTTTATGAATTGT TERM 932 909119 - 909132 + r 91 -8.1 -5.3236 | opp_overlap 909119, overlap 909112 909108 TCAGGCATAAAAAAA GTCGG CGAA CCGAC TTTTTTATGAATTGT Patl_0789 909995 - 909153 - | hypothetical protein TERM 933 909311 - 909327 + g 91 -10.9 -4.20368 | opp_overlap 909310 909311 GTAAGCGGGTGAAAG CTTCAGC AAC GCTGAAG TTTATGTTCACGTAA TERM 934 909327 - 909311 - G 73 -10.9 -2.73159 | opp_overlap 909311, overlap 909310 GTAAGCGGGTGAAAG CTTCAGC AAC GCTGAAG TTTATGTTCACGTAA Patl_0790 910672 - 910274 - | cytidine deaminase Patl_0791 910873 - 911784 + | lipoprotein NlpI Patl_0792 911824 - 913152 + | hypothetical protein TERM 935 913478 - 913498 + G 80 -9.7 -3.95324 | TGGCGCGCTTTGGCC GTGATTGCG ATG CGCAAACAC TTATTGTTGCAGGTG Patl_0793 913252 - 914310 + | quinolinate synthetase TERM 936 914356 - 914341 - f 80 -10.4 -3.65827 | opp_overlap 914341 TAATCCTGATTGAAA GCCAGC GAAT GCTGGC TTTTTCATTTTTCGT TERM 937 914341 - 914356 + F 100 -10.4 -5.1971 | opp_overlap 914341 TAATCCTGATTGAAA GCCAGC GAAT GCTGGC TTTTTCATTTTTCGT Patl_0794 914423 - 915016 + | beta-phosphoglucomutase family hydrolase TERM 938 915719 - 915773 + T 95 -15.3 -2.73635 | opp_overlap 915735, overlap 915735 915768 AATCCCTCTCTCTCC GCCAAATAATAAAAAAGCCCCTACG TTTTT CGTAGGGGCTTTTTTATTGTCTCGA ATTTACGAGGATTTG TERM 939 915757 - 915735 - T 100 -14.9 -5.72254 | opp_overlap 915719 915735 CCAAATAATAAAAAA GCCCCTACG TTTTT CGTAGGGGC TTTTTTATTGTCTCG TERM 940 915735 - 915757 + T 100 -14.9 -5.60689 | opp_overlap 915735, overlap 915719 CCAAATAATAAAAAA GCCCCTACG TTTTT CGTAGGGGC TTTTTTATTGTCTCG Patl_0795 917570 - 915921 - | sulfatase TERM 941 918249 - 918267 + G 73 -2.4 -5.12172 | CGCCGCCCCATCGTT TTTGCC GCATCCG GGCGAA TTTTGTTTGTTAATC Patl_0796 917823 - 918581 + | IclR family transcriptional regulator TERM 942 918608 - 918632 + F 93 -9.9 -4.66987 | TTACATTAACGTTTT GAGCGATTGCG CCA CGCTTTCGCTC TTTTATTCCGCTCTA Patl_0797 919173 - 920189 + | alcohol dehydrogenase GroES-like protein Patl_0798 920189 - 921019 + | amidohydrolase 2 TERM 943 921091 - 921105 + G 74 -5.6 -4.61231 | opp_overlap 921079 TTAGTTACGGTGCGT CACCGC TAG GCAGTG TTTTTAGAAATATCA Patl_0799 921030 - 921968 + | aldo/keto reductase Patl_0800 924033 - 922495 - | Altronate dehydratase Patl_0801 924263 - 925687 + | L-fucose transporter Patl_0802 926028 - 927530 + | tryptophan halogenase TERM 944 928968 - 928952 - g 73 -2.3 -5.1287 | TTGATATGCAAAAAA TTAAACA CTT TGTTGAA ACCAGTGCAAAACAT Patl_0803 927508 - 929028 + | tryptophan halogenase TERM 945 929605 - 929593 - g 82 -2.6 -5.56673 | overlap 929602 929603 ATTCACAAGAAAAAA GCGC ATCAA GCAC CGGCTTTAAAGCAGG TERM 946 930267 - 930306 + G 71 -9.5 -3.14132 | overlap 930264 930267 930274 GAAACGCAATTTGGC GTAAGAAGCCTTGCTTT CGATCC AGACCAAGGCTTTTTAC TTAATGGCAAAAGCA TERM 947 930274 - 930299 + G 73 -4 -4.90266 | overlap 930264 930267 930267 AATTTGGCGTAAGAA GCCTTGCTTT CGATCC AGACCAAGGC TTTTTACTTAATGGC TERM 948 930840 - 930825 - g 72 -5.4 -4.51812 | TTTGATAACAACAAA GGTCAA GAAG TCGACC ATCTTGCGCGAACGG TERM 949 931713 - 931703 - g 73 -4.6 -4.82901 | GTTGGTGGATAAAAA CGGC AAC ACCG TCCTTAACCATGATG Patl_0804 929370 - 931946 + | glycoside hydrolase family protein TERM 950 932235 - 932249 + G 72 -2.7 -5.00616 | opp_overlap 932235 AACCCTGGTTGGAAA GGGCG AGAGC CGACC TTTTTTCACAAAGAC TERM 951 932602 - 932580 - g 85 -6.4 -5.09426 | opp_overlap 932566 932582, overlap 932582 GGGAATGTCAAAAAA CATTTCTCTG ATT CAAAGAAATA CTATCACCCAGATGA TERM 952 932600 - 932582 - g 71 -6.8 -4.17355 | opp_overlap 932566 932582, overlap 932580 GAATGTCAAAAAACA TTTCTCTG ATT CAAAGAAA TACTATCACCCAGAT Patl_0805 931959 - 932846 + | glycoside hydrolase family protein TERM 953 932857 - 932879 + T 100 -10.6 -5.40072 | AGTAATAGGCCGTAA CGGTAAGCAA GGC TCGCTTACCG TTTTTTTGCAAGGAA Patl_0806 933621 - 932953 - | hypothetical protein TERM 954 933212 - 933226 + g 71 -7.1 -4.19177 | opp_overlap 933209 TTAGTTAACGCATTC GGTGC CCGTA GCACC TTTATGTTAAGCACT TERM 955 933419 - 933429 + g 72 -8.2 -3.75024 | GTTAAGTTCCCCCTA GCCG TGG CGGC TTGTTGATCCTCCAA Patl_0807 935149 - 933650 - | tryptophan halogenase TERM 956 935217 - 935201 - R 86 -10.8 -3.91897 | opp_overlap 935201 CGTGTTACCGACAAA GCCCCG ATATA CGGGGC TTTTATAGATGTTAC TERM 957 935201 - 935217 + r 91 -10.8 -4.4727 | opp_overlap 935201 CGTGTTACCGACAAA GCCCCG ATATA CGGGGC TTTTATAGATGTTAC Patl_0808 936940 - 935240 - | Ig-like, group 2 TERM 958 936448 - 936467 + g 74 -8.6 -3.86031 | TAAGCGGCTCATCAT TGCTGATG TCAT CGTCAGCA TTGTTGCTTGCTTCG Patl_0809 940671 - 937015 - | TonB-dependent receptor TERM 959 940146 - 940157 + g 78 -5.8 -4.87786 | AGCCTTCATCATGAT CTGC CGCG GCAG TTTTTATCACGTTGA TERM 960 941288 - 941278 - H 72 -3.2 -5.12707 | CTAAAGTCTAAAAAA TACC CGT GGCA AACGTAGAAAACAGC TERM 961 941343 - 941326 - H 70 -5.7 -4.39166 | opp_overlap 941326, overlap 941320 GTGTATATATGAAAA TGTATAT TCAA ATATACA TTTTAACAATAAGTC Patl_0810 941366 - 942718 + | carbohydrate-binding family 6 protein Patl_0811 942763 - 943677 + | hypothetical protein TERM 962 943867 - 943854 - g 75 -9.5 -3.53091 | opp_overlap 943842 943852 AGTGCGGCGTCTAAA CGCGC TTTA GCGCG GAATTATCATAAAAA TERM 963 944610 - 944634 + G 82 -11.5 -3.54951 | CACGAGCTCTGCGTG TGGCAATACCA AGA TGGAATTGCCA TTGTCTCCTCCCATG Patl_0812 943674 - 944966 + | hypothetical protein Patl_0813 945020 - 945325 + | porin family outer membrane protein TERM 964 945362 - 945346 - T 86 -9.4 -4.0162 | opp_overlap 945346, overlap 945330 GCTTCATATGATAAA GGCCAC ATGAA GTGGCC TTTTTTGTGTTAAGT TERM 965 945346 - 945362 + T 100 -9.4 -5.48063 | opp_overlap 945330 945346 GCTTCATATGATAAA GGCCAC ATGAA GTGGCC TTTTTTGTGTTAAGT Patl_0814 946813 - 945395 - | twin-arginine translocation pathway signal Patl_0815 950047 - 946823 - | hypothetical protein TERM 966 948557 - 948580 + g 79 -7.4 -4.52857 | ATCGTCGCCATTTAG GACGATTGCT TCTC GGCCATCGTC TTTTATATGCACCAT TERM 967 949145 - 949156 + g 74 -5.8 -4.67982 | overlap 949143 GTTGAAGGCCGTGGC GAGC ACTT GCTC TTTTGTTGGGTCAGG Patl_0816 951300 - 950056 - | twin-arginine translocation pathway signal Patl_0817 952697 - 951300 - | hypothetical protein TERM 968 952121 - 952133 + g 84 -4.7 -5.35815 | opp_overlap 952121 TTTCAAATGAGGCAA GGCTG AGG CCGCC TTTTTGTTTGCTGTC TERM 969 952148 - 952169 + g 78 -6.5 -4.58395 | CTTTTTGTTTGCTGT CGTTGTGGC AACT GGCACAGCG TTTTTCAAACATAGG TERM 970 953475 - 953504 + G 84 -8.5 -4.57341 | opp_overlap 953454 AAGTTTGATCGCACT TGCCGAGGCGGCA AACA TGTCGCCTGAGCA TTTTTCACGAAAATT TERM 971 953695 - 953681 - g 83 -9.2 -4.32046 | opp_overlap 953689, overlap 953676 953682 CGTTCAAAAAGGAAA CGGGCG TGA CGCCCA GCGCGTTTCGCAAAG TERM 972 953694 - 953682 - g 74 -10.5 -3.18505 | opp_overlap 953689, overlap 953681 953676 GTTCAAAAAGGAAAC GGGCG TGA CGCCC AGCGCGTTTCGCAAA Patl_0818 952867 - 953748 + | AraC family transcriptional regulator Patl_0819 955457 - 953886 - | sulfatase TERM 973 954051 - 954061 + g 74 -5.4 -4.60797 | overlap 954047 TTTATCACTGGCAAT CCAA GGG TTGG TTTTATCTGTGGGGG TERM 974 954636 - 954615 - G 70 -2.3 -5.05228 | overlap 954618 ATGAAATGAGAAAAA CAAGAAAAA CGGC TTTTTCGCG TTTTGTTCGATGAAG TERM 975 954633 - 954618 - G 72 -4.8 -4.59919 | overlap 954615 AAATGAGAAAAACAA GAAAAA CGGC TTTTTC GCGTTTTGTTCGATG TERM 976 954964 - 954948 - G 77 -9.4 -3.922 | opp_overlap 954953 954953 AAAGCTGTAATCAAA GCCCAC CTGTC GTGGGC CGGGTTTAACTTCTT Patl_0820 957356 - 955473 - | sulfatase TERM 977 955738 - 955757 + g 75 -6.5 -4.38447 | opp_overlap 955740 TGCTCTACATCGATA TACCAAG GTAGCG CTTGGTA TTTATCTTCTTCTGT TERM 978 956757 - 956777 + g 78 -6.2 -4.64766 | TTCATCAAACCAGAT TTTAGTGG CGTAA CCACTGAA TTTTTCGGGTGTACC Patl_0821 960598 - 957359 - | glycoside hydrolase family protein TERM 979 958174 - 958200 + g 79 -12.3 -2.80994 | opp_overlap 958169 TCACACTAACTGTGT CTGCAGCGATG GTTAA CTTCGCTGCAG TGTCATCCACTTGCA TERM 980 959866 - 959852 - G 79 -4.2 -5.24129 | opp_overlap 959852 GGTTTGCACAAAAAA GTCGTT CAG AGCGAC TTTAGGCTGAGCCAT TERM 981 960449 - 960468 + g 73 -10 -3.40102 | opp_overlap 960449, overlap 960447 960443 ATCAAAAGAATAGGA GGTTGCCC TGGC GGGTAACC TGTTGATTTGTATCA TERM 982 960484 - 960503 + g 89 -9.2 -4.62336 | TGTTGATTTGTATCA CGTCTGGG TTCT CCCAGTCG TTTTTGACCTGAACT TERM 983 961061 - 961043 - g 72 -5.2 -4.66833 | TGGCAATTTCAAAAA CCTTTGCC TTG GGCAGAAG AAGGCCAGAAGTGGA Patl_0822 960764 - 961120 + | hypothetical protein Patl_0823 961282 - 962886 + | Alpha-L-fucosidase TERM 984 964095 - 964076 - g 78 -6.4 -4.64766 | overlap 964078 CGTACACGCTAAAAA TATCAGCG ATAG CGCTGATT CGGGTGGCAGGTTAA TERM 985 964093 - 964078 - g 77 -9 -3.93817 | overlap 964076 TACACGCTAAAAATA TCAGCG ATAG CGCTGA TTCGGGTGGCAGGTT Patl_0824 962928 - 964292 + | glycoside hydrolase family protein TERM 986 964338 - 964355 + T 74 -6.3 -4.4078 | gap 1 ATTTTATGTTGGTAA CCTA-CGC AAA GCGCTAGG TTTTCGTTAACAAAA TERM 987 964389 - 964373 - T 93 -8 -5.4505 | opp_overlap 964373 TTCGTTAACAAAAAA GCCAAC TTTAC GTTGGC TTTTTTCGCTAAGGT TERM 988 964373 - 964389 + T 88 -8 -5.09225 | opp_overlap 964373 TTCGTTAACAAAAAA GCCAAC TTTAC GTTGGC TTTTTTCGCTAAGGT Patl_0825 966668 - 964467 - | Beta-glucosidase TERM 989 965353 - 965363 + g 71 -6.8 -4.15832 | ACGTTCGCTTGATAG GGCA AAA TGCC TTGTTTGTAATTAAT Patl_0826 966778 - 968661 + | sulfatase Patl_0827 968658 - 969536 + | AraC family transcriptional regulator TERM 990 969530 - 969518 - f 76 -2 -5.46657 | GATCCTAACAAAAAA TTCT AAACA AGAA GCGTAAGGAAATGAT TERM 991 970612 - 970600 - g 74 -3.3 -5.00884 | AGGGGCCTCAAAAAA GGCCA ATA CAGCC TTCATATTGATCAAA Patl_0828 969541 - 971043 + | lipolytic enzyme, G-D-S-L Patl_0829 971089 - 972621 + | sulfatase Patl_0830 974640 - 972733 - | sialic acid-specific 9-O-acetylesterase TERM 992 973209 - 973221 + g 72 -4.8 -4.70772 | overlap 973196 973192 973199 GCGCCCAATCGCTTG GAGC TGGTT GCTC TTTTATTCCATGTAT TERM 993 974683 - 974649 - R 95 -11.4 -5.0065 | TATTCATAAAGAAAA TGGCAGCCACCAGCGG ACA CAACCGATGACTGCCA ACAGGACCTATTTCG Patl_0831 976304 - 974691 - | Alpha-L-fucosidase TERM 994 976379 - 976408 + H 72 -4.5 -4.80167 | opp_overlap 976381, overlap 976381 ATTGCAAATAAAATT TACATATGAAAAT CATT ATTTTTATATGCA TTTTAATTTTTGCTA TERM 995 977607 - 977589 - g 72 -6.7 -4.35116 | TACTGCACAGCAAAA CGAATCC TCTGG GGATCCG CAAATTTGAGCTAGT Patl_0832 976664 - 979603 + | glycoside hydrolase family protein TERM 996 980918 - 980930 + G 78 -6.2 -4.58685 | overlap 980928 ATTCAACTACTTCAG CGCG ATGTC CGCG TTTTTCGAGCGCTTT Patl_0833 979593 - 981230 + | hypothetical protein TERM 997 981280 - 981264 - g 82 -8 -4.59424 | AAATCTAAACGAAAA CAGCCT TGAAG AGGCTG CCAATAAAGGCATTA Patl_0834 981235 - 982713 + | mannitol dehydrogenase-like Patl_0835 982726 - 984294 + | SSS family solute/sodium (Na+) symporter TERM 998 984838 - 984891 + G 70 -10.4 -2.52896 | opp_overlap 984837 984838, overlap 984842 984850 GTGGGCAGATAAAAC GGAAGCAAAGTATTGGCTAGAGCA AGCTTA TGCTCTGGCGGATATTGCGCTTCC TGGCTTGGAAGATCA Patl_0836 984317 - 985264 + | PfkB Patl_0837 985264 - 986187 + | dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like Patl_0838 987026 - 986256 - | hypothetical protein TERM 999 987725 - 987711 - g 78 -5.7 -4.8048 | opp_overlap 987719 GCTTTACATTAAAAA TGAGC TCAAC GCTCA GTATGGGCGGATCTT TERM 1000 987745 - 987757 + G 74 -10.5 -3.15861 | GGGCGGATCTTTTGG GGGCC AAT GGCCC TTAATGGCAGTGCTG TERM 1001 989282 - 989270 - g 79 -9.1 -4.1891 | overlap 989272 CGCGCCTAATACAAA GAGCG GAG CGCTC GGCGACGACAGCTAA Patl_0839 987484 - 990435 + | Ig-like, group 2 Patl_0840 991392 - 990436 - | transposase IS116/IS110/IS902 TERM 1002 991667 - 991652 - g 87 -10.4 -4.18197 | AGCTTTCAGCTAAAA CGCCTG ACGT CAGGCG GATGGTCAGGTGGCA Patl_0841 991595 - 991897 + | hypothetical protein TERM 1003 992432 - 992443 + T 70 -5.8 -4.43642 | overlap 992391 AAAGCTATGCACCGC CCTG ACAC CAGG TTTGTTAGTTCTTTT Patl_0842 994088 - 992448 - | Alpha-L-arabinofuranosidase TERM 1004 993736 - 993723 - G 72 -6.7 -4.30719 | GGCTGTGATAATAAA GTTGC CACC GCAAC CTACACAGGTCGTAA TERM 1005 994170 - 994192 + r 76 -10.7 -2.50438 | opp_overlap 994168, overlap 994169 994167 AGGGGCGAGCAGAGG GTAGTCGAT TGAGT ATCGACTAC GTATTGAATGTTTGC Patl_0843 995064 - 994210 - | glycoside hydrolase family protein TERM 1006 994676 - 994639 - G 70 -2.1 -5.00884 | gap 1, overlap 994640 ATTGCGGTTAAAAAA CCAAAAGCTACTCGCAAT ATT ATTATTAGCAGCTTT-GG CTCTCACCTCAAAAT TERM 1007 995085 - 995095 + r 71 -4 -4.95854 | ACCTTATTTTTAACG TTCA AAC TGAA TTTTTAGATTTTTTA TERM 1008 995319 - 995301 - R 70 -3 -5.00895 | opp_overlap 995303 995305, overlap 995280 995303 995305 TTTAGCATATAAAAA TAGACCTG TGT CAGGACTT TTTATAGTGAGTAGG TERM 1009 995303 - 995317 + r 79 -5.6 -4.9218 | opp_overlap 995280 995303 995301 995305, overlap 995305 TAGCATATAAAAATA GACCTG TGT CAGGAC TTTTTATAGTGAGTA TERM 1010 995676 - 995656 - R 86 -11.1 -3.85539 | overlap 995659 TACACTCACACGAAA CGAGCCCTG TGT CAGGGCTGG CGCCCTAACTGGCAA TERM 1011 995673 - 995659 - R 81 -11.4 -3.00138 | overlap 995656 ACTCACACGAAACGA GCCCTG TGT CAGGGC TGGCGCCCTAACTGG Patl_0844 996758 - 995709 - | Rieske (2Fe-2S) region Patl_0845 997021 - 997716 + | GntR family transcriptional regulator Patl_0846 998729 - 997818 - | LysR family transcriptional regulator Patl_0847 998845 - 999897 + | aminocarboxymuconate-semialdehyde decarboxylase TERM 1012 1000509 - 1000495 - g 70 -10 -3.05844 | opp_overlap 1000495 1000494, overlap 1000508 TGCCCCAGGGCAATA CGTTCG TGA CGAACG CTTTGAGCCTAAACG Patl_0848 1000097 - 1001035 + | glyoxalase/bleomycin resistance protein/dioxygenase Patl_0849 1001078 - 1002157 + | fumarylacetoacetate (FAA) hydrolase Patl_0850 1002356 - 1003549 + | alcohol dehydrogenase GroES-like protein Patl_0851 1004598 - 1003648 - | AraC family transcriptional regulator TERM 1013 1004079 - 1004060 - G 72 -6.4 -4.2717 | opp_overlap 1004071 1004073 ATCAGGTTAGTAAAA TTCATCGC AGTT GCGCTGAA ACCCGGCGTATTATG TERM 1014 1005269 - 1005258 - g 79 -2.2 -5.51402 | ATACACTGAAAAAAA TCCC GATG GAGA CACAGGAGCGTTCCC Patl_0852 1004702 - 1005769 + | Rieske (2Fe-2S) region Patl_0853 1006849 - 1005941 - | LysR family transcriptional regulator TERM 1015 1007210 - 1007230 + G 70 -4.7 -4.51378 | CGTCTCAATGACGGA CTCGAAAAG CAA CGTTTTGAG TTTTCTACTATGGAT TERM 1016 1007613 - 1007583 - g 84 -8.3 -4.67563 | opp_overlap 1007597, overlap 1007585 CAAGAGAAATGAAAA CGGGCTTTGGCTT TGTGC AAGCCAAAGGCAG CACTGCATTTGCTCC Patl_0854 1007033 - 1008028 + | fumarylacetoacetate (FAA) hydrolase Patl_0855 1008028 - 1008816 + | putative cyclase Patl_0856 1008873 - 1010033 + | hypothetical protein TERM 1017 1010235 - 1010245 + G 71 -6.8 -4.07455 | overlap 1010236 TACGGGCTCTATGCT GCGT AAA ACGC TTTATGGTGTTGCTG Patl_0857 1010044 - 1010976 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1018 1011075 - 1011096 + G 78 -5.1 -4.96646 | AAAGACAGCATGTTT GTTGTGCGC AAAG GTGAACAAC TTTTTGCTTATGTCG Patl_0858 1010982 - 1011344 + | Rieske (2Fe-2S) region TERM 1019 1011705 - 1011693 - g 78 -6.2 -4.58424 | overlap 1011683 TATTAGCAGAGAAAA CCCG GCAGT CGGG CGCCAATGTAAGACT Patl_0859 1011341 - 1012471 + | hypothetical protein TERM 1020 1012873 - 1012896 + F 80 -6.2 -4.72272 | gap 1, opp_overlap 1012873 AAGTTATTAATTTAA CTATG-GAAAA TAT TTTTCACATAG TTTTTAATAGGAAGC Patl_0860 1013094 - 1013471 + | hypothetical protein Patl_0861 1013568 - 1014245 + | hypothetical protein Patl_0862 1015235 - 1014279 - | transposase IS116/IS110/IS902 Patl_0863 1016771 - 1015563 - | transposase, IS4 TERM 1021 1016381 - 1016365 - G 71 -9.5 -3.18023 | overlap 1016363 GGATTATGACTAACA GGTGAAT TGT ATTCACC GAATGAAAATACGCG Patl_0864 1016894 - 1017466 + | hypothetical protein TERM 1022 1017507 - 1017558 + F 100 -13.7 -3.94 | opp_overlap 1017519 CTCACTTCGTTCGTT GGGACGCATACACGTGGGCTG CTTCGCATTA TAGCCCACGCGTCTGCGCCCC TTATTTAAAAGTTAA TERM 1023 1017798 - 1017772 - f 71 -6.6 -4.02108 | opp_overlap 1017772 1017770 GCTACTACAATTAAA GCCAAAAAGG ACATGTG CCTTGTTGGC TAATTTTATGTCACG TERM 1024 1020226 - 1020240 + G 74 -8.6 -3.94381 | AAAAAGTACGTTGAG GGTATC AGT GATACC TTTGTGACCTTCTGT Patl_0865 1018873 - 1021362 + | TonB-dependent receptor TERM 1025 1021460 - 1021442 - T 90 -10.2 -4.3129 | opp_overlap 1021443, overlap 1021443 CACTTATTAGTAAAA CGCCCCGA TTA TCGGGGCT TTTTTTACGTACTAA TERM 1026 1021443 - 1021459 + T 100 -13.7 -5.48825 | opp_overlap 1021442 1021443 ACTTATTAGTAAAAC GCCCCGA TTA TCGGGGC TTTTTTTACGTACTA TERM 1027 1021459 - 1021443 - T 93 -13.7 -3.18292 | opp_overlap 1021443, overlap 1021442 ACTTATTAGTAAAAC GCCCCGA TTA TCGGGGC TTTTTTTACGTACTA Patl_0866 1022828 - 1021929 - | LysR family transcriptional regulator Patl_0867 1023142 - 1024215 + | Rieske (2Fe-2S) region TERM 1028 1024265 - 1024322 + F 100 -17.1 -3.01791 | overlap 1024262 GTCAGTGCAGCCCAT CGCGTTCGCTGTTTTGAGCTGCGCCGA TTAA TGGGCGCAGCTTAAAACGGTTAGCGCC TATTAAAGAACACGT Patl_0868 1024367 - 1024777 + | DoxX Patl_0869 1024823 - 1025779 + | ferredoxin Patl_0870 1025986 - 1027590 + | sulfatase Patl_0871 1028932 - 1028189 - | siderophore-interacting protein Patl_0872 1029636 - 1028959 - | glutathione S-transferase-like TERM 1029 1029030 - 1029041 + g 80 -7.2 -4.56597 | TCGCTTCATCATCAC GGGC AATA GCCC TTTTTACCGCGGGGC TERM 1030 1029359 - 1029341 - G 73 -2.4 -5.18726 | opp_overlap 1029343, overlap 1029343 GTTGCAGAACAAAAA CACAGATC GGC AATCTGTT TTGCACAGTCTAGGG TERM 1031 1029794 - 1029780 - H 78 -4.2 -5.21709 | opp_overlap 1029780, overlap 1029783 1029784 CGTCATATCAAAAAA GCACCT TTC ACGTGC TCTATGCCTTCAAAC Patl_0874 1030393 - 1031952 + | carboxylesterase, type B TERM 1032 1032137 - 1032119 - T 76 -8.9 -3.78953 | opp_overlap 1032119 AGTGCCAGCACTAAA GCCTAGT GATTA ACTAGGC TTTTGGCGCCCTTCA TERM 1033 1032119 - 1032137 + T 83 -8.9 -4.09739 | opp_overlap 1032119 AGTGCCAGCACTAAA GCCTAGT GATTA ACTAGGC TTTTGGCGCCCTTCA Patl_0875 1033332 - 1032121 - | major facilitator transporter TERM 1034 1033123 - 1033113 - G 73 -2.4 -5.12707 | CCAAAGGTGAAAAAA GGGC GAC GCAC AATGCCGGAACAGTC TERM 1035 1033763 - 1033787 + H 93 -7.9 -5.51353 | TTCGGTTTGGTTCTG CTGTCAGTAGA GAG TTTACTGTCAG TTTTTGTTGTTTTTA TERM 1036 1034117 - 1034129 + G 72 -10.5 -2.836 | overlap 1034116 ATTTTGACCATACCG GCGGG TTA CCCGC ATTATTAAGTCTTCG TERM 1037 1034524 - 1034505 - g 72 -5 -4.58663 | overlap 1034506 ATTACTTGCTAAAAA TGCTGATA TGCT TATCAGCG AAATGATGGATGTTG Patl_0876 1033828 - 1034814 + | beta-lactamase-like TERM 1038 1035944 - 1035926 - f 85 -9 -4.16943 | TTTTATAGCGCAAAA GTAAACAT ATG ATGTTTAC AATGATTTAATGTTG Patl_0878 1036136 - 1036765 + | hypothetical protein TERM 1039 1037724 - 1037683 - g 76 -2.3 -5.32944 | gap 1, opp_overlap 1037684 1037685, overlap 1037685 1037686 CTGATAAGCAAAAAA GAT-GACTCGGCACCTATAT CCG ACCCAGGTGGCGAGTCGATT CTTGATACAGACTTA TERM 1040 1037721 - 1037685 - g 72 -6.5 -4.29187 | opp_overlap 1037684 1037685, overlap 1037683 1037686 GATAAGCAAAAAAGA TGACTCGGCACCTATAT CCG ACCCAGGTGGCGAGTCG ATTCTTGATACAGAC TERM 1041 1037720 - 1037686 - g 71 -10 -3.15885 | opp_overlap 1037685 1037684, overlap 1037685 1037683 ATAAGCAAAAAAGAT GACTCGGCACCTATAT CCG ACCCAGGTGGCGAGTC GATTCTTGATACAGA TERM 1042 1038487 - 1038471 - g 74 -3.6 -5.08824 | GCGCTATGTAAAAAA TCCGGC AGGAA GCCCGA ATCTCAATAAGCCGA TERM 1043 1038739 - 1038711 - g 70 -9.7 -3.02966 | overlap 1038710 AGATTGGATAGAAAT CGATAACATTGAA GCC TTCAACGGTATCG GCGTTCGCTTAGAAG TERM 1044 1038924 - 1038912 - g 75 -6.3 -4.40804 | CATCAGTGTAGAAAA TATCG AAG CGATA GACAGCGGTACGGCC Patl_0879 1036849 - 1039473 + | hypothetical protein TERM 1045 1039702 - 1039718 + G 86 -5.1 -5.47399 | overlap 1039707 1039715 GTTTATGTCATTAGG GCGCT CGCTTTC AGCGC TTTTTTTGCGCTTCA Patl_0880 1039675 - 1040676 + | glycoside hydrolase family protein Patl_0881 1040699 - 1042231 + | sulfatase TERM 1046 1042388 - 1042364 - f 76 -7.1 -4.14243 | overlap 1042366 1042367 GACCTTATCTGAAAA GACTCACACCT TGA AGGCGTGAAGC GTTAACACTTCAGCC TERM 1047 1042386 - 1042366 - f 73 -8.3 -3.6692 | overlap 1042364 1042367 CCTTATCTGAAAAGA CTCACACCT TGA AGGCGTGAA GCGTTAACACTTCAG TERM 1048 1042385 - 1042367 - f 71 -9.6 -2.79831 | overlap 1042366 1042364 CTTATCTGAAAAGAC TCACACCT TGA AGGCGTGA AGCGTTAACACTTCA Patl_0882 1042701 - 1043162 + | hypothetical protein Patl_0883 1043467 - 1043730 + | hypothetical protein Patl_0884 1044639 - 1043860 - | hypothetical protein TERM 1049 1043963 - 1043973 + g 71 -6.8 -4.11484 | GGTGTCCATATTGCA GGGT CAT ACCC TTTTACAAACTTACC TERM 1050 1044493 - 1044506 + g 71 -3.9 -4.8048 | CACATTATCACCCAC TTCAT GATG ATGAA TTTTTACTGTCCAGC TERM 1051 1044760 - 1044817 + r 93 -13.7 -3.05963 | gap 1, opp_overlap 1044772 1044777, overlap 1044777 GCGTGTATTTATCCT TCTCAGTCTAAACGAAACCACCACCTTT GTT AAAGGTAGTGGTTTCGTC-ACACTGGGG TGTTGAAATAGCGGT TERM 1052 1044806 - 1044772 - R 100 -21 -3.59979 | opp_overlap 1044760 1044777, overlap 1044777 CCTTCTCAGTCTAAA CGAAACCACCACCTTT GTT AAAGGTAGTGGTTTCG TCACACTGGGGTGTT TERM 1053 1044777 - 1044801 + r 88 -11.5 -3.73775 | opp_overlap 1044772 1044777, overlap 1044760 TCAGTCTAAACGAAA CCACCACCTTT GTT AAAGGTAGTGG TTTCGTCACACTGGG TERM 1054 1044801 - 1044777 - R 100 -13.7 -4.07246 | opp_overlap 1044777 1044760, overlap 1044772 TCAGTCTAAACGAAA CCACCACCTTT GTT AAAGGTAGTGG TTTCGTCACACTGGG Patl_0885 1047258 - 1044832 - | hypothetical protein TERM 1055 1045407 - 1045390 - G 76 -4.1 -5.03145 | opp_overlap 1045392, overlap 1045392 TAAGCCTTCAAAAAA CAGCTCT TCAT AGAGCTT GTACCCTTTGGTCAT Patl_0886 1049106 - 1047358 - | Ig-like, group 2 TERM 1056 1048214 - 1048199 - G 72 -10.4 -2.79492 | opp_overlap 1048209, overlap 1048198 GGGGTAACGTTAAAT CCTGCG GTTA CGCAGG CGGGTACCTCTTTCG TERM 1057 1048972 - 1048958 - G 71 -7.1 -4.07568 | GTTTCTTCTTCAAAA GACGC GTTAA GCGTC GCCGTATCAAAGGTC Patl_0887 1052923 - 1049213 - | TonB-dependent receptor TERM 1058 1054628 - 1054618 - g 77 -6.8 -4.47707 | overlap 1054626 CCTTATGAAAAACAA GCCA AAA TGGC GCAATACAATCGCGG Patl_0888 1054099 - 1055652 + | sulfatase Patl_0889 1055728 - 1057230 + | sulfatase TERM 1059 1057278 - 1057242 - f 100 -16.8 -3.35867 | opp_overlap 1057239 TTAATCCTTAATCAA TTAGGCAGTGCTTGAA TGCAG CTCAAGCACCGCCTAA ATCTCCCTTTACCCT TERM 1060 1059077 - 1059091 + G 73 -11.4 -2.50113 | overlap 1059076 1059079 TAAGCCTAGGTGATT CACCGC AAG GCGGTG CTTCGTCACGTGATG Patl_0890 1057378 - 1059318 + | hypothetical protein TERM 1061 1060650 - 1060640 - g 82 -5.4 -5.09426 | TTCAAGGGCAAAAAA CAGA TGC TCTG GTCGAACTGGTCGAT Patl_0891 1059484 - 1061181 + | sulfatase TERM 1062 1061452 - 1061434 - g 71 -3.8 -4.78764 | overlap 1061424 GAAAGGGAGCAAAAA CGGTTTTA GTC CAAGACCG CCCCGTCTTAGGAGG TERM 1063 1062146 - 1062128 - g 85 -6 -5.39721 | overlap 1062137 GGATTACATAAAAAA TTCAGGAA AGT TTCCAGAA TCTGAGAACCTCGCC Patl_0892 1061178 - 1063103 + | fumarate reductase/succinate dehydrogenase flavoprotein-like TERM 1064 1063759 - 1063748 - g 77 -7.2 -4.55128 | ACCTCGAAACTAAAA GCGC TATT GCGC AGTAACAATGCTGTA Patl_0893 1063103 - 1064368 + | hypothetical protein TERM 1065 1064766 - 1064746 - f 73 -8.5 -3.62418 | opp_overlap 1064741 1064746 AGAATTCACTTGAAA TATAAACAT CAT ATGTTTATA TTTAATCTATGAATG TERM 1066 1064746 - 1064766 + F 77 -8.5 -3.89212 | opp_overlap 1064746, overlap 1064741 AGAATTCACTTGAAA TATAAACAT CAT ATGTTTATA TTTAATCTATGAATG TERM 1067 1065083 - 1065095 + G 72 -4.7 -4.57073 | GCACCTATCAGCGCC GCCAG CAC CAGGC TTTTTAAAACAACTG Patl_0894 1064775 - 1065536 + | GntR-like TERM 1068 1065543 - 1065555 + F 71 -6.2 -4.15453 | opp_overlap 1065543 GTCGACTAAACACTA GCGC GAATG GCGC TTTTAAGATGACTTA TERM 1069 1065609 - 1065623 + G 73 -7.8 -4.07868 | AATCAGTTTTTCATC GCGTTG TAG CAGCGC TTTCTATCAGTGTGG TERM 1070 1065871 - 1065860 - g 73 -4.4 -4.77036 | CGCTACCAGCAAAAA TTCG GTTA CGAA GAAATAAACGTGCCG Patl_0895 1065590 - 1067005 + | sulfatase TERM 1071 1067023 - 1067057 + F 79 -9.4 -3.63569 | opp_overlap 1067029, overlap 1067029 ACACAATAATGGCCA GAGCAATGCTGACTTT ACA ACAGTCAGCATTTTTC TTGTTAGGGGGTTAG TERM 1072 1067051 - 1067029 - f 72 -9.2 -3.26947 | opp_overlap 1067023 1067029 TAATGGCCAGAGCAA TGCTGACTTT ACA ACAGTCAGCA TTTTTCTTGTTAGGG TERM 1073 1067029 - 1067051 + F 93 -9.2 -5.29445 | opp_overlap 1067029, overlap 1067023 TAATGGCCAGAGCAA TGCTGACTTT ACA ACAGTCAGCA TTTTTCTTGTTAGGG Patl_0896 1067420 - 1068862 + | aldehyde dehydrogenase Patl_0897 1068862 - 1070025 + | mandelate racemase/muconate lactonizing-like protein Patl_0898 1070031 - 1071092 + | 2-keto-3-deoxy-galactonokinase Patl_0899 1071159 - 1071809 + | KDPG and KHG aldolase TERM 1074 1072115 - 1072129 + G 78 -6.4 -4.63486 | GGGTGGCTATTTTAG GCGTTA TTT TAGCGC TTTTGTTCACCGGGT Patl_0900 1071940 - 1073496 + | sugar transporter Patl_0901 1073655 - 1074395 + | GntR-like TERM 1075 1074440 - 1074457 + T 88 -7.7 -5.1356 | opp_overlap 1074432 1074440 1074443 CGACAAATAATGAAA CATCAGC TTAG GCTGGTG TTTTTGTTCATAAGA Patl_0902 1075148 - 1074669 - | hypothetical protein Patl_0903 1075723 - 1075469 - | hypothetical protein Patl_0904 1075894 - 1075739 - | hypothetical protein Patl_0905 1076060 - 1076413 + | MerR family transcriptional regulator TERM 1076 1076408 - 1076439 + F 72 -3.6 -5.01553 | overlap 1076413 1076414 TTAATGACAAAGTTT TCTTGACCTTGCCC TTAG GGGCAAGGGTTATA TTTTATTTCTAAATT TERM 1077 1076413 - 1076434 + F 89 -10.1 -4.14927 | overlap 1076408 1076414 GACAAAGTTTTCTTG ACCTTGCCC TTAG GGGCAAGGG TTATATTTTATTTCT TERM 1078 1076414 - 1076433 + F 93 -13.6 -3.06516 | overlap 1076413 1076408 ACAAAGTTTTCTTGA CCTTGCCC TTAG GGGCAAGG GTTATATTTTATTTC TERM 1079 1076494 - 1076482 - g 72 -2.7 -4.95876 | AATTATAATGAAAAA CTTAA CGT TCAAG AACAAAACGGTACTA TERM 1080 1077103 - 1077093 - g 73 -4 -4.86133 | CAGATACATCAAAAA TGAA GTT TTCA TCAACAGGAAAAGTT Patl_0906 1076474 - 1077295 + | short-chain dehydrogenase/reductase SDR Patl_0907 1077475 - 1078458 + | hypothetical protein Patl_0908 1079130 - 1078807 - | hypothetical protein TERM 1081 1079014 - 1078998 - G 71 -3.7 -4.90013 | CAAGCCAAGCAAAAA TGCTAAT TGG ATTGGCA ATGGCCGCATTGAAT Patl_0909 1079692 - 1079279 - | hypothetical protein TERM 1082 1081802 - 1081789 - g 71 -3.8 -4.81359 | opp_overlap 1081789 1081799 AATTTAAACACAAAA CTGC TTGATG GCAG TGACTTGTCTTTAAG TERM 1083 1081802 - 1081826 + G 75 -11.5 -2.9732 | overlap 1081799 AACTGCTTGATGGCA GTGACTTGTCT TTA AGCCAAGTCAC TAATTTCCCTTGGGA Patl_0910 1080397 - 1082394 + | hypothetical protein TERM 1084 1082436 - 1082470 + F 93 -9.4 -4.78933 | TGATGTGCACCGTTA GGCTAATCGAAGCG CCACTCA CGTTTTGATTGGCC TTTTCTATATTTTGC TERM 1085 1082492 - 1082523 + F 80 -4.5 -5.27335 | gap 1 ATATTTTGCTTATTC TCAGGCC-CGTTTG GCAAG CAAATAAGGCCTGA TTTTTCTTTGCACAG TERM 1086 1083856 - 1083839 - g 73 -11.3 -2.50994 | opp_overlap 1083838 1083836 1083839, overlap 1083838 TTGAACCCCAGCAAG CGCTTGG CTGG CCAAGCG ATATTTGCCCTGAAG TERM 1087 1083839 - 1083856 + G 73 -11.3 -2.62613 | opp_overlap 1083839 1083838, overlap 1083838 1083836 TTGAACCCCAGCAAG CGCTTGG CTGG CCAAGCG ATATTTGCCCTGAAG Patl_0911 1082683 - 1084677 + | hypothetical protein Patl_0912 1085823 - 1084924 - | short-chain dehydrogenase/reductase SDR TERM 1088 1086985 - 1086966 - g 84 -10.8 -3.88946 | GACTCGATACAAGAA CCTAAAGG CAAT CCTTTAGG AGAAATTAATGCTCA Patl_0913 1086933 - 1087784 + | hypothetical protein Patl_0914 1088350 - 1087832 - | hypothetical protein Patl_0915 1089460 - 1088420 - | hypothetical protein Patl_0916 1090177 - 1090674 + | hypothetical protein TERM 1089 1090738 - 1090710 - f 100 -15.3 -2.92246 | opp_overlap 1090708 1090707 1090706 CGAAGTGTAAGTACA CGACGTGGTGGGC CCA GCTCACCACGTCA CACTATTTCTAACCG Patl_0917 1091362 - 1092030 + | hypothetical protein Patl_0918 1092023 - 1092604 + | hypothetical protein Patl_0919 1092671 - 1093237 + | hypothetical protein TERM 1090 1094133 - 1094154 + F 71 -5.2 -4.58663 | gap 1 TCTATGGCCTGTAGC GCG-GTGAA AGGGA TTCACTCGC TTTTTGCAAAATGAT TERM 1091 1095237 - 1095247 + G 72 -8.2 -3.68359 | CTGCGAACAGTGTTG CGCC TTT GGCG TTCTACTTTTCGGGG Patl_0920 1094567 - 1095544 + | hypothetical protein Patl_0921 1095674 - 1096702 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1092 1096721 - 1096750 + T 83 -4.9 -5.31877 | opp_overlap 1096709 1096722 1096725, overlap 1096725 AAGCGCTTTATCCAA ACGAGCAGGCGCA GCTA TGTGCCTGCTTTA TTTTTTGTGATGACT TERM 1093 1096725 - 1096746 + T 100 -12.3 -5.1471 | opp_overlap 1096722 1096725, overlap 1096721 GCTTTATCCAAACGA GCAGGCGCA GCTA TGTGCCTGC TTTATTTTTTGTGAT TERM 1094 1096746 - 1096725 - T 75 -10.1 -2.94144 | opp_overlap 1096725 1096721, overlap 1096722 GCTTTATCCAAACGA GCAGGCGCA GCTA TGTGCCTGC TTTATTTTTTGTGAT Patl_0922 1097733 - 1096774 - | 2-nitropropane dioxygenase, NPD TERM 1095 1097073 - 1097089 + g 78 -6.5 -4.6902 | CAGTGTCAGTTGAAT CGGCATC TAT GATGGCG TTTTTCCAGTTCTGG TERM 1096 1097386 - 1097397 + g 72 -5.8 -4.43879 | AACATGAAATACGGT GAGG CCAG CCTC TTTTAGTTGGGTGGT Patl_0923 1098092 - 1098868 + | hypothetical protein TERM 1097 1099381 - 1099359 - g 79 -11.9 -3.14931 | opp_overlap 1099359 1099358 1099356, overlap 1099373 TTCATTGGTCATGAA CGGTGCGCC AGAAA GGCGCTCCG CTGTTTACGTGGCAC TERM 1098 1099359 - 1099381 + G 76 -11.9 -2.64144 | opp_overlap 1099359 1099373, overlap 1099358 1099356 TTCATTGGTCATGAA CGGTGCGCC AGAAA GGCGCTCCG CTGTTTACGTGGCAC TERM 1099 1100427 - 1100442 + G 73 -4.6 -4.82901 | AAAAACGGTCAAACC CGGCGC GCCT GTGCTG TTTTTATCCCCCAGA Patl_0924 1099213 - 1100481 + | DNA/RNA non-specific endonuclease TERM 1100 1101313 - 1101293 - g 79 -8.1 -4.33417 | opp_overlap 1101293 TTGAGCCAGAACAAA CCGTTGCCG AGC CGGCTCCGG TCGTTCGCCCAAGTA Patl_0925 1100914 - 1101645 + | septum site-determining protein MinC Patl_0926 1101746 - 1102555 + | septum site-determining protein MinD Patl_0927 1102555 - 1102806 + | cell division topological specificity factor MinE TERM 1101 1102831 - 1102865 + T 93 -11.5 -4.5774 | overlap 1102833 ACCGCTTCAGATATC GCGCGTGATCGTAAG AGATG CTTATGGTCACGCTC TTTTGATTCTTCCTG TERM 1102 1102833 - 1102863 + T 93 -12.7 -3.88577 | overlap 1102831 CGCTTCAGATATCGC GCGTGATCGTAAG AGATG CTTATGGTCACGC TCTTTTGATTCTTCC Patl_0928 1103400 - 1102963 - | GCN5-related N-acetyltransferase Patl_0929 1104340 - 1103486 - | hypothetical protein TERM 1103 1103758 - 1103774 + g 78 -5.7 -4.76075 | overlap 1103759 TAGGTAATAATGGCA GGCCGTC CAT GGCGGCA TTTTCTTCATCTAAT TERM 1104 1103759 - 1103773 + g 70 -9.2 -3.4456 | overlap 1103758 AGGTAATAATGGCAG GCCGTC CAT GGCGGC ATTTTCTTCATCTAA TERM 1105 1104234 - 1104244 + g 79 -4.6 -5.2696 | opp_overlap 1104234 TTAGCACTTAATACA GCGC GCC GTGC TTTTTTGCGTTTTAG Patl_0930 1104718 - 1106361 + | X-Pro dipeptidyl-peptidase-like TERM 1106 1106376 - 1106404 + T 73 -9.5 -3.12253 | opp_overlap 1106395 1106396, overlap 1106373 1106373 AACTAGGTCTGTGAT GTGTGAGTGGGCC AAA GAACCACTCGCAC TCCTTTGTATTGCTA TERM 1107 1106615 - 1106591 - T 70 -8.7 -3.34517 | opp_overlap 1106588, overlap 1106589 ACTGGTGCTTAAACA CGAGATATAAA TAA TATATATCTCG GGGTATGCTTGCCGC TERM 1108 1106796 - 1106761 - T 74 -4.9 -4.7254 | gap 1, opp_overlap 1106769, overlap 1106764 AGGTGTGATGAAAAA GCAGCAAACTTCATGA TACAG TTATGAAGTTTGC-AC TTAGAGGTTATTTAG TERM 1109 1106794 - 1106764 - T 75 -9.9 -3.28472 | opp_overlap 1106769, overlap 1106761 TGTGATGAAAAAGCA GCAAACTTCATGA TACAG TTATGAAGTTTGC ACTTAGAGGTTATTT Patl_0931 1108303 - 1106804 - | hypothetical protein TERM 1110 1107146 - 1107135 - G 79 -4.4 -5.26119 | TTTCTAAAAACAAAA TGTC CGCC GACA GCCCCGTAACCATCA Patl_0932 1110999 - 1108477 - | TonB-dependent receptor, plug TERM 1111 1108741 - 1108729 - G 76 -9.1 -3.76224 | opp_overlap 1108727 CGTCCACTCACCAAA GCGTG TCG CACGC AGATTTAGAACCCAG TERM 1112 1111829 - 1111798 - R 81 -11.7 -2.88579 | opp_overlap 1111823, overlap 1111801 TCAATGTGGGAGAGA GCAGCTATTGGAC ATTTCG GTCCAATAGCTGA GCCAAGCTACTTTTA TERM 1113 1111826 - 1111801 - R 81 -12 -2.6927 | opp_overlap 1111823, overlap 1111798 ATGTGGGAGAGAGCA GCTATTGGAC ATTTCG GTCCAATAGC TGAGCCAAGCTACTT Patl_0933 1113746 - 1111842 - | TRAP transporter, 4TM/12TM fusion protein TERM 1114 1112954 - 1112973 + g 78 -5.8 -4.77036 | gap 1 CAATACCGGCAGCTT GCTCTGGTT TAT AACCA-AGC TTTTTCATCATAGGG TERM 1115 1113210 - 1113180 - G 70 -2.5 -5.05037 | overlap 1113182 1113185 1113187 TAACACAAAAATAAA TACGACACCTGCT GCAAT AGCAAGTGGAGCA CCGTAGATACCATTG TERM 1116 1113700 - 1113672 - G 71 -7.6 -3.89448 | gap 1 TTGAAAAATAGATAA TGCTA-TTGCTGC CAAT GCAGCAATTAACA CAACTTTATTTGTAA Patl_0934 1114839 - 1113913 - | TRAP transporter solute receptor TAXI family protein TERM 1117 1114541 - 1114530 - G 70 -2.2 -5.06223 | overlap 1114525 ATAAAGCAAATAAAA CGGA TACA TCCA TTTTTCGAGGGAAAG TERM 1118 1114885 - 1114907 + r 72 -10 -2.50113 | opp_overlap 1114885, overlap 1114884 CCGCAGTATTAAATA TTTTGCGTTG AAT CAACGTAAAA GTTGCTGAAATGCTG Patl_0935 1117912 - 1115027 - | TonB-dependent receptor, plug TERM 1119 1117460 - 1117476 + g 86 -3 -5.65513 | TTGGGCATTCTTATT CGAAGT ACTAG ACTTTG TTTTTTTCGTTAATG Patl_0936 1119081 - 1118029 - | putative FecR TERM 1120 1118772 - 1118760 - G 71 -3.4 -4.88687 | GCAAATAAAAAATAA TTGG AATCG CCAA CACCAATGCTGCAAA Patl_0937 1119704 - 1119084 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1121 1119773 - 1119757 - R 71 -5.1 -4.57341 | overlap 1119769 AATGTCCTGTAAAAA TGCGACA AAA CGTCACA AAAAATTAGTGAAAT TERM 1122 1119901 - 1119918 + r 81 -2.6 -5.53991 | AAAAACACTCTTGTT GAAGCG TTCTGT CGCTAC TTTTTTTAGTAAATA Patl_0938 1120600 - 1120076 - | hypothetical protein TERM 1123 1120760 - 1120726 - R 86 -9.4 -3.99444 | opp_overlap 1120731 AATAATACTCACAAA GATGACCCTATGCA CTTGTGC CGCATAGGGTTATC TCGCGCTTAATGATT Patl_0939 1123080 - 1120789 - | TonB-dependent receptor TERM 1124 1123404 - 1123422 + H 71 -3.9 -4.91429 | gap 1, overlap 1123405 GGTATTCGGTTGACC G-TGGTAC GTCA GTACCATC TTTTGTTTAAGGTTT TERM 1125 1123405 - 1123420 + H 73 -7.6 -4.06281 | overlap 1123404 GTATTCGGTTGACCG TGGTAC GTCA GTACCA TCTTTTGTTTAAGGT Patl_0940 1123645 - 1125987 + | TonB-dependent receptor Patl_0941 1125993 - 1127231 + | peptidase M19, renal dipeptidase Patl_0942 1127867 - 1127325 - | hypothetical protein TERM 1126 1127609 - 1127619 + g 72 -5.4 -4.49556 | TGACCGGTGATATCG CTAC AGC GTAG TTTGTTTCATGGCGG TERM 1127 1127953 - 1127929 - H 95 -2.9 -6.11019 | opp_overlap 1127929 1127943 1127946 1127950, overlap 1127920 1127931 1127933 1127950 AAAAATCAAAAAAAA TAGTTTTATTG CTG CAATAAATCGA CTTTACCGTTCGGTA TERM 1128 1127951 - 1127931 - H 73 -5.5 -4.63519 | opp_overlap 1127929 1127943 1127946 1127950, overlap 1127920 1127929 1127933 1127950 AAATCAAAAAAAATA GTTTTATTG CTG CAATAAATC GACTTTACCGTTCGG TERM 1129 1127975 - 1127950 - H 73 -6.9 -4.1552 | opp_overlap 1127929 1127946 1127943 1127950 1127962, overlap 1127931 1127929 TATTGCTGCAATAAA TCGACTTTACC GTTC GGTAATATCGA ATTATTATTGTTTTT Patl_0943 1128196 - 1128711 + | hypothetical protein Patl_0944 1129367 - 1128966 - | rhodanese-like protein Patl_0945 1130169 - 1129375 - | hypothetical protein TERM 1130 1130190 - 1130220 + H 70 -8.6 -3.33261 | opp_overlap 1130193, overlap 1130193 TGTACAAACTTTGAT TAATATTGTATATT TAC AATATACGATATTG TTGTGCAAATTAGCA TERM 1131 1130193 - 1130217 + H 73 -8.1 -3.8062 | opp_overlap 1130193, overlap 1130190 ACAAACTTTGATTAA TATTGTATATT TAC AATATACGATA TTGTTGTGCAAATTA Patl_0946 1130247 - 1131113 + | beta-lactamase-like Patl_0947 1132743 - 1131124 - | response regulator receiver protein TERM 1132 1132190 - 1132207 + g 72 -6.3 -4.27483 | gap 1 TCGTTGTACACGCTT GCGGCTTC TTT GAAGC-GC TTTACTTTTATGAGT TERM 1133 1132757 - 1132768 + H 75 -3 -5.19212 | ATGAAGGGCCTTTCG GATT TTAA AATC TTTTTTCATCATAAT Patl_0948 1133011 - 1134501 + | methylmalonate-semialdehyde dehydrogenase TERM 1134 1134904 - 1134888 - g 80 -12.3 -3.03771 | overlap 1134890 TCATATTGCTTAACA GAGCCAG GTT CTGGCTC AGATGCCGCAGCACT TERM 1135 1135131 - 1135111 - g 100 -8.3 -5.4756 | opp_overlap 1135122 AAGCGGAAGAAAAAA TGGGCTG GAATGCG CAGCCCA CGCGCTTAATTACGT Patl_0949 1134513 - 1135670 + | acyl-CoA dehydrogenase-like TERM 1136 1135685 - 1135700 + F 81 -5.4 -5.1287 | opp_overlap 1135685 GAGCGAGTATAAACA TCCTGA GCTA TCGGGA TTTTTTGCATATCAG TERM 1137 1136824 - 1136834 + G 75 -3.2 -5.1861 | AGGTGCCAAATGAGA CCAT GGT GTGG TTTTTTGATAGTCCA Patl_0950 1135764 - 1136894 + | enoyl-CoA hydratase/isomerase Patl_0951 1136897 - 1137817 + | 3-hydroxyisobutyrate dehydrogenase fabG 1137877 - 1138638 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1138 1138663 - 1138693 + F 70 -7.7 -3.72765 | opp_overlap 1138665, overlap 1138665 1138689 ATTCTACCTGCAACA AACACGTATCTAA GCATA TTAGGTACGTGTC TTTACACTTTGCATT TERM 1139 1138665 - 1138691 + F 77 -10.3 -3.43919 | opp_overlap 1138665, overlap 1138663 1138689 TCTACCTGCAACAAA CACGTATCTAA GCATA TTAGGTACGTG TCTTTACACTTTGCA TERM 1140 1138691 - 1138665 - f 77 -8.1 -4.16842 | opp_overlap 1138665 1138663 1138689 TCTACCTGCAACAAA CACGTATCTAA GCATA TTAGGTACGTG TCTTTACACTTTGCA Patl_0953 1138987 - 1140543 + | hypothetical protein TERM 1141 1140566 - 1140536 - f 70 -8.4 -3.34398 | opp_overlap 1140544 GTTTGCGTCGAAAGA GGTTTTAATCACTT TTT AAGAGATTAATACC AACTTCATTAAATAA TERM 1142 1140624 - 1140647 + F 100 -11.8 -5.50313 | opp_overlap 1140621 1140624 ATTGGTATAAAGTCA CCCAGTTCGA TGTA TTGAACTGGG TTTTTTGGTTTTATA TERM 1143 1140647 - 1140624 - f 70 -9.6 -2.70532 | opp_overlap 1140624, overlap 1140621 ATTGGTATAAAGTCA CCCAGTTCGA TGTA TTGAACTGGG TTTTTTGGTTTTATA TERM 1144 1140948 - 1140923 - g 79 -10.5 -3.53761 | opp_overlap 1140928, overlap 1140926 CAACGCCGTGGCAAA CAACAGAGCTA CTGC TAGCGCTGTTG CAACAAGATTGTGAA Patl_0954 1140679 - 1141278 + | peptidoglycan binding domain-containing protein Patl_0955 1141542 - 1141279 - | hypothetical protein TERM 1145 1141512 - 1141524 + g 70 -4.8 -4.38712 | opp_overlap 1141512 GAGATATTTGATAAG GCAG CAATT CTGC TTTTATACCAATCCG Patl_0956 1142643 - 1141864 - | glutamine amidotransferase, class-II TERM 1146 1142548 - 1142570 + g 79 -10.4 -3.53091 | opp_overlap 1142528, overlap 1142550 GCCCCAACCGTCTCT GTGGGGGCCG ACG CGGCCGCCCC TTTCCCGAAGACCCT TERM 1147 1142550 - 1142569 + g 73 -11.4 -2.71712 | gap 1, opp_overlap 1142528, overlap 1142548 CCCAACCGTCTCTGT GGG-GGCCG ACG CGGCCGCCC CTTTCCCGAAGACCC Patl_0957 1142778 - 1143269 + | hypothetical protein TERM 1148 1143379 - 1143391 + F 74 -4.8 -4.70583 | opp_overlap 1143377 1143366 1143379 GACAAGATAAAGAGA GCAG AAGCC CTGC TTTTATCTTGATGAG TERM 1149 1144498 - 1144484 - g 72 -5.7 -4.43477 | opp_overlap 1144484, overlap 1144488 TTGAGCCAAGTAAAA GCAAG GCCGA CTTGC TATTGGCCACGCTCA TERM 1150 1145655 - 1145638 - g 85 -6.9 -4.9218 | opp_overlap 1145637 1145651 1145652 CAGTCACTACAAAAA GGCTCGA GCCC TCGTGCC GCTTTTAGCGGACAT Patl_0958 1143550 - 1145889 + | hypothetical protein Patl_0959 1145889 - 1146761 + | hypothetical protein TERM 1151 1147938 - 1147910 - g 88 -12.5 -3.53761 | CAACTGGTTTGTAAA TGCCCAGTTAGTC GTG GACTATCTGGACA AAAAGCAATTTGAAT TERM 1152 1147986 - 1148002 + G 85 -5.8 -5.42259 | overlap 1147987 1147990 GATACCTTGCTCACA TTGCGC GCCCA GCGCAG TTTTTTTAACGCTAG Patl_0960 1146762 - 1148213 + | hypothetical protein Patl_0961 1150959 - 1148224 - | TPR repeat-containing serine/threonin protein kinase TERM 1153 1148487 - 1148499 + g 76 -4.9 -4.74598 | TGACCTGCTGGTGAT CAATT TCA AATTG TTTATTTTGCATTTG TERM 1154 1148918 - 1148928 + g 93 -6.8 -5.65177 | AGTACATGTAGCGCG CGCT CTA AGCG TTTTTTTGTAGGTAT Patl_0962 1151071 - 1151646 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1155 1151657 - 1151685 + T 83 -9.7 -3.84451 | opp_overlap 1151664, overlap 1151664 GGTAAACGCTACGCA TTAAAAATCCGCT CAA GGCGGATTTTTTA TTTGGCTTTCGGGGC TERM 1156 1151664 - 1151678 + T 100 -7.8 -5.67283 | opp_overlap 1151664, overlap 1151657 GCTACGCATTAAAAA TCCGCT CAA GGCGGA TTTTTTATTTGGCTT TERM 1157 1151678 - 1151664 - T 83 -7.1 -4.7497 | opp_overlap 1151657 1151664 GCTACGCATTAAAAA TCCGC TCAAG GCGGA TTTTTTATTTGGCTT Patl_0963 1152067 - 1151732 - | hypothetical protein TERM 1158 1151850 - 1151865 + g 78 -4.7 -5.09225 | AATGCCACCATGTTT TGACC ATTACA GGTCA TTTTTTCAGTCACAT Patl_0964 1152458 - 1153468 + | hypothetical protein Patl_0965 1153561 - 1153809 + | signal transduction protein TERM 1159 1153797 - 1153815 + T 76 -3.1 -5.27923 | GTGGCAGCAATCTTG GTGGG AATACTAAA CCCAC TTTTTTGTCAGATTA TERM 1160 1153849 - 1153877 + T 100 -14.7 -3.26568 | opp_overlap 1153854, overlap 1153854 AACAATCCAATTACC AAAAAGCCCAAGC ATT GCTTGGGCTTTTG ATTTTCTAACTGTCG TERM 1161 1153872 - 1153854 - T 100 -14.6 -4.81083 | opp_overlap 1153849 1153854 TCCAATTACCAAAAA GCCCAAGC ATT GCTTGGGC TTTTGATTTTCTAAC TERM 1162 1153854 - 1153872 + T 100 -14.6 -4.73108 | opp_overlap 1153854, overlap 1153849 TCCAATTACCAAAAA GCCCAAGC ATT GCTTGGGC TTTTGATTTTCTAAC Patl_0966 1155081 - 1153897 - | saccharopine dehydrogenase TERM 1163 1155124 - 1155114 - R 76 -6.8 -4.4261 | opp_overlap 1155114 GGGCTAATAGTAAAA CCAG ATG CTGG TGGCTTCACTTTATT TERM 1164 1155280 - 1155251 - R 95 -13.7 -3.78934 | opp_overlap 1155273 1155274 1155276, overlap 1155266 GGGCTTTGAGAATAA CTCGCTATCAACA AACA CGCTGATAGCGAG TGGATACACTTGCTA TERM 1165 1155274 - 1155295 + r 71 -9.5 -2.77233 | opp_overlap 1155251 1155266, overlap 1155273 1155276 CAACAAACACGCTGA TAGCGAGTG GATA CACTTGCTA ATTTAGAACTTATAA Patl_0967 1157907 - 1155298 - | TonB-dependent receptor TERM 1166 1156907 - 1156919 + g 93 -9.1 -4.89729 | CTTGGGCTACCAGCA CCACG GAT CGTGG TTTTTGAGTTTTGTC TERM 1167 1158078 - 1158061 - R 100 -7.7 -5.81412 | opp_overlap 1158060 TTTAGGTAAAAAAAA CCACCTC ATAC AAGGTGG GTGTGATTCATAATG TERM 1168 1158326 - 1158300 - R 100 -17.4 -5.38321 | opp_overlap 1158295 1158294 AAAGAGCATAAAAAA GCCGGGACAAAT ATT ATTCGTCCCGGC TTCAAATTTAGTTTG Patl_0968 1159827 - 1158364 - | pyruvate kinase Patl_0969 1160994 - 1160140 - | DNA-binding transcriptional regulator HexR TERM 1169 1160821 - 1160804 - G 71 -9.9 -3.13906 | overlap 1160801 1160802 1160809 TGTAATTTAAAATCA GGATACC CCTT GGTATCC AAGCGTCTGCAAAAA TERM 1170 1161151 - 1161176 + H 70 -7.7 -3.70773 | opp_overlap 1161155 1161156 1161165 1161168, overlap 1161148 1161155 GTCGCCTTTTCTTAA CAAACGTTGTA AAAT TACAACATTTG TTGTTAACTGTGGGC Patl_0970 1161270 - 1162760 + | glucose-6-phosphate 1-dehydrogenase Patl_0971 1162762 - 1163454 + | 6-phosphogluconolactonase TERM 1171 1163566 - 1163551 - g 73 -4.6 -4.89729 | opp_overlap 1163562 1163563 GACAAAATTGAAAAA GCCCGT TTAC AGGGGC CACATCGTGGCACGT TERM 1172 1163804 - 1163822 + G 81 -13.2 -2.68532 | CTGCAATGTGTGATG GCGTTACC CAA GGTAACGC TGGTATGGATTTAAG Patl_0972 1163464 - 1165287 + | phosphogluconate dehydratase TERM 1173 1165840 - 1165823 - g 78 -6.3 -4.72272 | gap 1 CTTTTTGACCAAAAA GCT-AGGC CAC GCCTCAGC AGAAGAAGTGATGTC Patl_0973 1165290 - 1166243 + | glucokinase Patl_0974 1166249 - 1166896 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 1174 1166935 - 1166920 - T 80 -10.4 -3.76482 | opp_overlap 1166920 TTAGATGATTAAGAA GGCCAC GAAA GTGGCC TTTTTTGTGTCTGCC TERM 1175 1166920 - 1166935 + T 100 -10.4 -5.4251 | opp_overlap 1166920 TTAGATGATTAAGAA GGCCAC GAAA GTGGCC TTTTTTGTGTCTGCC Patl_0975 1167373 - 1166966 - | hypothetical protein Patl_0976 1167789 - 1167439 - | hypothetical protein TERM 1176 1167821 - 1167840 + r 89 -12.2 -3.524 | opp_overlap 1167821 ATGAGAAATAGAAAA GCAGCTTC GAAG GAAGCTGC TTGTGTAGATACATG TERM 1177 1167840 - 1167821 - R 100 -12.2 -4.85822 | opp_overlap 1167821 ATGAGAAATAGAAAA GCAGCTTC GAAG GAAGCTGC TTGTGTAGATACATG Patl_0977 1169177 - 1167867 - | N-acetylglutamate synthase Patl_0978 1170577 - 1169201 - | argininosuccinate lyase TERM 1178 1170094 - 1170074 - G 71 -10.4 -2.75307 | AACATAGGCCAAGCA CCAGTGCG GGTAG CGCACCGG TTGAGCACGCTGCAA Patl_0979 1171815 - 1170577 - | argininosuccinate synthase Patl_0980 1172768 - 1171851 - | ornithine carbamoyltransferase Patl_0981 1173551 - 1172778 - | acetylglutamate kinase TERM 1179 1173078 - 1173101 + g 72 -4.7 -4.72272 | gap 1, overlap 1173066 CGTTGCCGCTTGATC GGC-ATTTAC ATTGA GTAAATTGCC TTTTTCATCGGCACC argC 1174576 - 1173548 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1180 1174680 - 1174642 - H 100 -16.3 -5.98675 | gap 1 GACAAAAATAAAAAA TCACCCAAGACCTTTAGC AAAT ACTAAAGGTC-TGGGTGA GCTAAACGCTACAGA TERM 1181 1175890 - 1175868 - g 72 -2.6 -5.03145 | GAATTGGCCAAAAAA CTAACGGGCT TTG ATCCTGTCAG TGCTAATTACGCCAC Patl_0983 1174917 - 1176062 + | acetylornithine deacetylase Patl_0984 1176149 - 1177225 + | kelch repeat-containing protein mgsA 1177288 - 1177695 + | methylglyoxal synthase Patl_0986 1178694 - 1177846 - | hypothetical protein TERM 1182 1178555 - 1178566 + g 75 -3 -5.09426 | TGACGTTGTGCGCCG GTTA AATC TAAC TTTTTTAAAATTGGG Patl_0987 1178871 - 1179578 + | two component transcriptional regulator Patl_0988 1179575 - 1180978 + | periplasmic sensor signal transduction histidine kinase Patl_0989 1181180 - 1182088 + | alpha/beta hydrolase fold TERM 1183 1182104 - 1182125 + F 75 -9.5 -3.31598 | opp_overlap 1182104 ACCTTACTGCAGTAA GCGCAATTT GTTA GAATTGCGC TTAATCTGACTTTAT Patl_0990 1182154 - 1182618 + | RNA methyltransferase TERM 1184 1182689 - 1182643 - T 75 -8 -4.06781 | opp_overlap 1182648 1182649, overlap 1182646 AGCAAAACGTATAAA TATTTCGCCTATTGGGTAAGCG TTT CGTTTACCCAATAGGCTTTTTA CAATGCACCGTGCTC TERM 1185 1182686 - 1182646 - T 71 -9.7 -2.75876 | opp_overlap 1182648 1182649, overlap 1182643 AAAACGTATAAATAT TTCGCCTATTGGGTAAGCG TTT CGTTTACCCAATAGGCTTT TTACAATGCACCGTG TERM 1186 1182649 - 1182683 + T 100 -22.4 -4.62069 | opp_overlap 1182646 1182643, overlap 1182648 ACGTATAAATATTTC GCCTATTGGGTAAGCG TTT CGTTTACCCAATAGGC TTTTTACAATGCACC fre 1183423 - 1182710 - | FMN reductase Patl_0992 1183936 - 1184169 + | hypothetical protein Patl_0993 1184240 - 1184938 + | Sel1 repeat-containing protein TERM 1187 1185485 - 1185463 - g 95 -11.2 -4.41348 | TGCTGGTCAAAGAAA GCGGCACCGA TAA TCGAGGCCGC CGAGAAGCACGCATA Patl_0994 1185078 - 1187510 + | ribonuclease R TERM 1188 1187792 - 1187802 + G 79 -2.4 -5.52023 | opp_overlap 1187781, overlap 1187785 GAAATCATTAAAAAA AGCG CCA CGCC TTTTTTGTTAATACT Patl_0995 1187513 - 1188253 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 1189 1188407 - 1188380 - T 80 -10.7 -3.38564 | overlap 1188369 TAAACGCAGCTATAA CTACTGCCACA AGCAGA TATGGCAGTAG CTAAAGTAACAGGCG Patl_0996 1188824 - 1188435 - | hypothetical protein TERM 1190 1188496 - 1188525 + g 93 -7.2 -5.80364 | gap 1 AAACAAGATCGCAAT GGCTCGGTAATGA AATCA TCA-TGCCGGGCC TTTTTTTCTTGCCCT Patl_0997 1188877 - 1189770 + | LysR family transcriptional regulator Patl_0998 1189933 - 1191573 + | AMP-dependent synthetase and ligase TERM 1191 1192084 - 1192069 - f 70 -3.2 -4.93877 | opp_overlap 1192070, overlap 1192070 TTTTAGGAAACAAAA CGACTC GTGA GAGTCT TAATTAACAGCGGAG Patl_0999 1192107 - 1192472 + | ribosomal protein L14 rplX 1192485 - 1192799 + | 50S ribosomal protein L24 TERM 1192 1192939 - 1192915 - g 75 -6.6 -4.42386 | gap 1 CTCGGATTGAGAAAA TCACTCTAAAC ATGG GTTTAG-GTGA AGCGGTAGCAGACAA rplE 1192815 - 1193354 + | 50S ribosomal protein L5 Patl_1002 1193365 - 1193670 + | ribosomal protein S14 rpsH 1193683 - 1194075 + | 30S ribosomal protein S8 rplF 1194086 - 1194619 + | 50S ribosomal protein L6 Patl_1005 1194632 - 1194985 + | ribosomal protein L18 rpsE 1194995 - 1195498 + | 30S ribosomal protein S5 Patl_1007 1195499 - 1195687 + | ribosomal protein L30 TERM 1193 1195732 - 1195702 - g 79 -9.8 -3.6806 | opp_overlap 1195702, overlap 1195704 1195705 ACAGATGCATTTAAA TACTCTTGCTCCTG CAC CAGGAGCAAAAAAA TCTAGTAAGCGCGTT TERM 1194 1195730 - 1195704 - g 85 -12.4 -3.41836 | opp_overlap 1195702, overlap 1195702 1195705 AGATGCATTTAAATA CTCTTGCTCCTG CAC CAGGAGCAAAAA AATCTAGTAAGCGCG TERM 1195 1195729 - 1195705 - g 83 -13.7 -2.6462 | opp_overlap 1195702, overlap 1195704 1195702 GATGCATTTAAATAC TCTTGCTCCTG CAC CAGGAGCAAAA AAATCTAGTAAGCGC rplO 1195691 - 1196125 + | 50S ribosomal protein L15 TERM 1196 1196572 - 1196582 + G 73 -4.6 -4.8622 | GGTTTGGTGATTAAT CCGG GGT TCGG TTTTTACTTCACAGC TERM 1197 1197379 - 1197412 + G 79 -10.5 -3.61715 | gap 1 TTCATGGCGCAAGTG CAGACCCAT-TTGATG TCT CATCAATATGAGTCTG TTCTTAAGAAAGCTA TERM 1198 1197456 - 1197424 - g 76 -8.6 -4.15044 | gap 1, opp_overlap 1197423 TCTGTTCTTAAGAAA GCTAACCTTAAGGGC TACG GCCGTTAAG-TTAGC GATTTACGGAGTGAT secY 1196131 - 1197450 + | preprotein translocase subunit SecY Patl_1010 1197475 - 1197591 + | ribosomal protein L36 TERM 1199 1197932 - 1197903 - g 75 -10.1 -3.58037 | gap 1, opp_overlap 1197909 GACGAAGTTGCGAAA TTCACTGTCGAAGG TGA CCTTCGTC-GTGAA GTATCAATGAGTATT rpsM 1197717 - 1198073 + | 30S ribosomal protein S13 TERM 1200 1198123 - 1198108 - g 79 -8.2 -4.25848 | overlap 1198095 AAGCTCCTACTAAAA GCACGC GTAA GCGCGC AAAACGTCAAGTTGC Patl_1012 1198086 - 1198478 + | 30S ribosomal protein S11 TERM 1201 1198484 - 1198467 - f 74 -4.1 -5.08824 | opp_overlap 1198453 CGTCCACCGAAAAAA CGTCG CGTTTAAT CGACG GACTGTTGGAGAAAG TERM 1202 1198632 - 1198642 + G 71 -6.8 -4.0641 | GGTCAACACGGCGCA CGTC GTG GACG TTTGTCTGACTACGG rpsD 1198503 - 1199123 + | 30S ribosomal protein S4 TERM 1203 1200049 - 1200037 - g 77 -3.4 -5.10497 | AACTTAGGTAAAAAA TCTC TTACT GAGA TCAAAGATGTACTAG Patl_1014 1199146 - 1200135 + | DNA-directed RNA polymerase subunit alpha rplQ 1200173 - 1200574 + | 50S ribosomal protein L17 TERM 1204 1200626 - 1200578 - T 95 -11.4 -5.06414 | gap 1, opp_overlap 1200595, overlap 1200595 GCTGCGGAATAAAAA TTCCTACAATAAAAAAACCGGAT TAAA ATCCGGTTTTTTTAT-GTCTGAA ATTCATAGAATAACC TERM 1205 1200595 - 1200610 + T 100 -9 -5.76633 | opp_overlap 1200595 1200578 CCTACAATAAAAAAA CCGGAT TAAA ATCCGG TTTTTTTATGTCTGA TERM 1206 1200610 - 1200595 - T 100 -9 -5.88565 | opp_overlap 1200595, overlap 1200578 CCTACAATAAAAAAA CCGGAT TAAA ATCCGG TTTTTTTATGTCTGA TERM 1207 1200930 - 1200915 - T 100 -9 -5.65177 | opp_overlap 1200915 ACAGTTATAAAAAAA CCGGAT AATA ATCCGG TTTGATAATATTAAA TERM 1208 1200915 - 1200930 + T 79 -9 -3.84648 | opp_overlap 1200915 ACAGTTATAAAAAAA CCGGAT AATA ATCCGG TTTGATAATATTAAA Patl_1016 1201738 - 1200965 - | hypothetical protein TERM 1209 1204219 - 1204259 + H 100 -12.1 -5.02074 | opp_overlap 1204213 1204218 AGTAGAAAAGATTAG CCTTAATCAATGTGTACTG ATT CAGTATTTATTGATTAGGG TTTTTTAAACCCTAC TERM 1210 1204959 - 1204947 - H 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 1211 1205754 - 1205736 - H 79 -10.3 -3.54743 | overlap 1205749 CATGAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 1212 1206257 - 1206246 - H 72 -4.4 -4.7254 | overlap 1206248 ACTGTTTATTAAAAA CACA GCAC TGTG CTAAATCGAAAGATG TERM 1213 1207364 - 1207389 + H 71 -6.9 -4.0371 | opp_overlap 1207364 1207367, overlap 1207367 TGAGGCTTAACCATA CAACGCCCAAA TGAC TTTGGATGTTG TTTGTATGACAAGTA TERM 1214 1207688 - 1207651 - H 73 -10 -2.79501 | gap 1, opp_overlap 1207651 1207657, overlap 1207657 CAGACTCCCATTACA CGAAAA-GCCCTGAACA AAAAA CGGTCAGGGCTTTTTCG TATATGCGTTTCGCG TERM 1215 1207657 - 1207681 + H 85 -7.1 -4.84527 | opp_overlap 1207651 1207657, overlap 1207651 CCCATTACACGAAAA GCCCTGAAC AAAAAAC GGTCAGGGC TTTTTCGTATATGCG TERM 1216 1207681 - 1207657 - H 80 -7.8 -4.371 | opp_overlap 1207657 1207651, overlap 1207651 CCCATTACACGAAAA GCCCTGAACA AAAAA CGGTCAGGGC TTTTTCGTATATGCG TERM 1217 1207879 - 1207897 + H 93 -8.1 -5.42514 | opp_overlap 1207879, overlap 1207872 CCCATTTAGAATGAA GCCACCT TAATC GGGTGGC TTTTTTCGTTTCTGC TERM 1218 1208543 - 1208533 - g 76 -4 -4.93877 | CTTTACTAAAGAAAA GTTT GTT AAAC GTGTTGATGCAGAGG Patl_1017 1208246 - 1208902 + | nitroreductase TERM 1219 1208922 - 1208969 + T 89 -12.2 -3.6279 | overlap 1208923 TTTAATTAACTGTTC TGTCCAAGAGTAACCAGCCA AGATTTAA TCTCTGGTTACTCTTGGACG TTGTTAAGGGAATTT TERM 1220 1208923 - 1208968 + T 91 -13.5 -2.77192 | overlap 1208922 TTAATTAACTGTTCT GTCCAAGAGTAACCAGCCA AGATTTAA TCTCTGGTTACTCTTGGAC GTTGTTAAGGGAATT Patl_1018 1209953 - 1208973 - | formiminoglutamase TERM 1221 1209156 - 1209141 - G 76 -7.6 -4.19624 | opp_overlap 1209137 GATTTGCAATACAAA GGGTAT CTCG ATACCC AATGTGCTTGGCGCG Patl_1019 1211160 - 1209937 - | imidazolonepropionase Patl_1020 1211257 - 1211991 + | histidine utilization repressor Patl_1021 1211975 - 1213675 + | urocanate hydratase TERM 1222 1214285 - 1214307 + G 75 -6.2 -4.4648 | GTACGCAAGCATCAA CGGCGTTTGC CTT GCAAGGGCTG TTTTATGCTGAAAAT TERM 1223 1214773 - 1214786 + G 77 -3.7 -5.14563 | overlap 1214774 ATTGACTCTAGCTTA AGCGG TTTG CCGCC TTTTTTGGTGGACAA Patl_1022 1213678 - 1215207 + | histidine ammonia-lyase TERM 1224 1215729 - 1215739 + G 82 -6.8 -4.7373 | opp_overlap 1215727 CGATGTGCAAAATGG CGGT TTC ACCG TTTTTGGTCAAGTCC TERM 1225 1215814 - 1215833 + G 83 -10.6 -3.72984 | overlap 1215825 CGATTTGATTTAGGG GGCGCGGC AAGC GCAGCGCC TTTGCGTGATTATAC Patl_1023 1215304 - 1216086 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1226 1216112 - 1216129 + T 81 -6.9 -4.68384 | opp_overlap 1216113, overlap 1216113 TGAAAGCAAAAAAAA ACGGCTC ATGT GAGCCGC TTTTATTAGATAGGT TERM 1227 1216113 - 1216128 + T 77 -10.4 -3.40307 | opp_overlap 1216113, overlap 1216112 GAAAGCAAAAAAAAA CGGCTC ATGT GAGCCG CTTTTATTAGATAGG TERM 1228 1216128 - 1216113 - T 100 -10.4 -6.28631 | opp_overlap 1216113 1216112 GAAAGCAAAAAAAAA CGGCTC ATGT GAGCCG CTTTTATTAGATAGG Patl_1024 1218024 - 1216153 - | GTP-binding protein TypA glnA 1218364 - 1219773 + | glutamine synthetase TERM 1229 1219819 - 1219835 + F 100 -9.4 -5.4492 | opp_overlap 1219819 TGTGAATGATTCAAA GCCTGC TTTAT GCAGGC TTTTTTGTATCTATA TERM 1230 1219835 - 1219819 - f 79 -9.4 -3.71527 | opp_overlap 1219819 TGTGAATGATTCAAA GCCTGC TTTAT GCAGGC TTTTTTGTATCTATA Patl_1026 1219943 - 1220497 + | hypothetical protein Patl_1027 1220581 - 1221660 + | signal transduction histidine kinase, nitrogen specific, NtrB Patl_1028 1221657 - 1223063 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 1231 1223070 - 1223105 + T 93 -9.8 -4.80178 | overlap 1223072 AATATGTAGTGAGCC TAGACTCAGTGCCGAT ACAT ATTGGCACTGAATCGA TTTTCTTGGTTGATA TERM 1232 1223072 - 1223103 + T 83 -12.4 -2.67129 | overlap 1223070 TATGTAGTGAGCCTA GACTCAGTGCCGAT ACAT ATTGGCACTGAATC GATTTTCTTGGTTGA Patl_1029 1224269 - 1223130 - | metal dependent phosphohydrolase Patl_1030 1224455 - 1225174 + | 1-acyl-sn-glycerol-3-phosphate acyltransferases TERM 1233 1225168 - 1225154 - f 75 -10 -3.17685 | GAATTAGACAGTGAA GTTGCC GCT GGCAAC CGCTAAACTAGCGAC Patl_1031 1225207 - 1225560 + | hypothetical protein TERM 1234 1225679 - 1225648 - f 76 -4.5 -5.03314 | gap 1, overlap 1225651 TTCATGGTGAAAAAA CGACACTCCTTACA TAAAT TATAGGGAGTG-CG TCATGAAAATATCAG Patl_1032 1225682 - 1226419 + | hypothetical protein TERM 1235 1226485 - 1226518 + F 100 -19.1 -4.19238 | opp_overlap 1226490, overlap 1226490 ACTGAATTCCACCGT TAAAAGAGCACGCCA CAAA TGGCGTGCTCTTTTG TTTTAAAGTTACGCC TERM 1236 1226513 - 1226490 - f 100 -16.8 -4.11394 | opp_overlap 1226485 1226490 ATTCCACCGTTAAAA GAGCACGCCA CAAA TGGCGTGCTC TTTTGTTTTAAAGTT TERM 1237 1226490 - 1226513 + F 100 -16.8 -5.10163 | opp_overlap 1226490, overlap 1226485 ATTCCACCGTTAAAA GAGCACGCCA CAAA TGGCGTGCTC TTTTGTTTTAAAGTT Patl_1033 1226869 - 1231380 + | endonuclease I Patl_1034 1231418 - 1231969 + | PEP motif-containing protein TERM 1238 1232062 - 1232038 - f 100 -15.1 -3.78902 | opp_overlap 1232038 TAATTAATATTGAAA GGCGGTTAATC TTA GACTAACCGCC TTTTTTATTACCCAC TERM 1239 1232038 - 1232062 + F 100 -12.9 -5.4505 | opp_overlap 1232038 TAATTAATATTGAAA GGCGGTTAATC TTA GACTAACCGCC TTTTTTATTACCCAC TERM 1240 1235187 - 1235206 + G 74 -3.6 -4.91852 | GCTGAGATAACGGCT TCTGAATC ACCT GATTTGGA TTTGTTTTTGGTGCG Patl_1035 1232391 - 1236815 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 1241 1236857 - 1236839 - f 70 -8.8 -3.34013 | TATTGCGTTAATTAA CGGCTCCA AAA TGGAGCTG TAAAATCACACCAAA TERM 1242 1236873 - 1236891 + F 100 -11.7 -5.40072 | opp_overlap 1236863 1236873 1236885 TAAAATCACACCAAA GGCGCTC ATTAA GAGCGCC TTTTTTTGCGCCCGC TERM 1243 1236891 - 1236873 - f 91 -11.7 -3.92694 | opp_overlap 1236873, overlap 1236863 1236885 TAAAATCACACCAAA GGCGCTC ATTAA GAGCGCC TTTTTTTGCGCCCGC Patl_1036 1237190 - 1238254 + | RND family efflux transporter MFP subunit Patl_1037 1238260 - 1241370 + | acriflavin resistance protein TERM 1244 1241412 - 1241438 + T 93 -7.4 -5.36441 | gap 1, opp_overlap 1241412 CTGAGCATACCTAAA GCGGC-TAAGT GTTTTA ACTTATGCCGC TTTTTTGTGTCCGGC TERM 1245 1241575 - 1241605 + T 71 -9.9 -2.80016 | opp_overlap 1241582, overlap 1241582 ACAAAAAATAAGCGA AAAAAAACCGGAT ATTGA ATCCGGTTTTTTG TACTTGCTAATACAA TERM 1246 1241598 - 1241582 - T 100 -8 -5.87688 | opp_overlap 1241575 1241582 ATAAGCGAAAAAAAA CCGGAT ATTGA ATCCGG TTTTTTGTACTTGCT TERM 1247 1241582 - 1241598 + T 93 -8 -5.38249 | opp_overlap 1241582, overlap 1241575 ATAAGCGAAAAAAAA CCGGAT ATTGA ATCCGG TTTTTTGTACTTGCT Patl_1038 1243491 - 1241650 - | RNA polymerase, sigma 70 subunit, RpoD TERM 1248 1242664 - 1242676 + g 82 -7.7 -4.59773 | ACGGATACGATCCAT CATGC TGC GCATG TTTTTAACCATACGG Patl_1039 1245403 - 1243637 - | DNA primase TERM 1249 1243777 - 1243787 + g 74 -5.4 -4.65078 | opp_overlap 1243775 1243777 AACTATCTTTAAATA CCAA TGC TTGG TTTTCTTCAGCGTAT TERM 1250 1245476 - 1245501 + r 76 -9 -3.68908 | opp_overlap 1245477, overlap 1245477 GGTCTGCATAAACAA ACAAGCCGCA AATAAA TGCGGCTTGA TTTCAATAGATATTT TERM 1251 1245500 - 1245477 - R 100 -12.5 -4.55295 | opp_overlap 1245476 1245477 GTCTGCATAAACAAA CAAGCCGCA AATAAA TGCGGCTTG ATTTCAATAGATATT TERM 1252 1245477 - 1245500 + r 83 -12.5 -2.80622 | opp_overlap 1245477, overlap 1245476 GTCTGCATAAACAAA CAAGCCGCA AATAAA TGCGGCTTG ATTTCAATAGATATT TERM 1253 1245552 - 1245572 + r 82 -6.1 -4.87133 | AGGCGAACTCAAGAG GTCTAGCTA AGC TAGCTTGGC TTTTATTTGACCGCT Patl_1040 1246001 - 1245558 - | hypothetical protein TERM 1254 1245806 - 1245818 + g 71 -3.3 -4.78933 | TGGCTTGTTCGAACT GACTC GCA GCGTC TTTTCTCTGTTTTAC TERM 1255 1246075 - 1246052 - R 84 -10.4 -3.79203 | overlap 1246045 1246073 AGATAAAACTGCAAA GGGCGTTTAA TACG TTAAACACCC TAGGAGAGAATTAGT rpsU 1246301 - 1246086 - | 30S ribosomal protein S21 TERM 1256 1246125 - 1246139 + g 72 -2.8 -5.02074 | opp_overlap 1246125, overlap 1246127 GTTTTCGCGAGACAA CTTCTT CAA AAGACG TTTTTTAGCAGCTGC TERM 1257 1246207 - 1246194 - G 72 -3.1 -5.00884 | AGGCTTTTCAAAAAA TTCGC GACG ACGAA CTTCAGAAAGAACAC TERM 1258 1246363 - 1246349 - H 90 -8.6 -5.0538 | TGCCAGCGCAAAAAA TAACCG GCT CGGTTA AAAATGGTGCGGAAT Patl_1042 1246520 - 1247533 + | metalloendopeptidase glycoprotease family Patl_1043 1248215 - 1247613 - | hypothetical protein TERM 1259 1248068 - 1248048 - G 79 -10.3 -3.60072 | overlap 1248044 GAAAATAAAGACTAA GGCTGCCGG TAG CCGACCGCC AATGCGTAAAACATT Patl_1044 1248292 - 1248651 + | dihydroneopterin aldolase Patl_1045 1248648 - 1249166 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1260 1249709 - 1249719 + G 70 -2.4 -5.00339 | opp_overlap 1249710, overlap 1249704 GGGCTTGATAGAGAA AGCG CAG CGCG TTTTTCGTTCTTACT Patl_1046 1249163 - 1249963 + | undecaprenyl pyrophosphate phosphatase Patl_1047 1249988 - 1250353 + | histidine triad (HIT) protein TERM 1261 1250413 - 1250393 - T 71 -6.8 -4.12405 | opp_overlap 1250394 1250394, overlap 1250394 ATAAAGATAATTAAA GGCGAAGC GAAAT GCTTCGCT TGCTTTATGCACCCA TERM 1262 1250394 - 1250416 + T 71 -7.1 -3.85698 | gap 1, opp_overlap 1250393 1250394, overlap 1250394 TAAAGATAATTAAAG GCGAAGCGAA ATGC TTCGCTT-GC TTTATGCACCCAGGG TERM 1263 1250394 - 1250412 + T 82 -11 -3.6053 | opp_overlap 1250394 1250393, overlap 1250394 TAAAGATAATTAAAG GCGAAGCG AAA TGCTTCGC TTGCTTTATGCACCC TERM 1264 1250412 - 1250394 - T 75 -10.3 -3.05816 | opp_overlap 1250394 1250394, overlap 1250393 TAAAGATAATTAAAG GCGAAGC GAAAT GCTTCGC TTGCTTTATGCACCC Patl_1048 1252458 - 1250458 - | diguanylate cyclase/phosphodiesterase TERM 1265 1252162 - 1252179 + g 73 -4.1 -4.7657 | gap 1, overlap 1252164 GACAAATCTGAGCGT TGCG-CGG TGG CCGTCGTA TTTTTGCCCTTTTTG TERM 1266 1252380 - 1252332 - G 76 -9 -3.77087 | gap 2, opp_overlap 1252332 1252336, overlap 1252338 CAGCGAACAGCGAAA CAAGAATGCCGCCTATGCTGTTTT GGT ACAGCAGC-TCGGCGGCA-TCTTG TTCTGTGCTTTTTGA TERM 1267 1252332 - 1252380 + g 86 -11.2 -3.72037 | gap 2, opp_overlap 1252332 1252338, overlap 1252336 CAGCGAACAGCGAAA CAAGAATGCCGCCTATGCTGTTTT GGT ACAGCAGC-TCGGCGGCA-TCTTG TTCTGTGCTTTTTGA TERM 1268 1252375 - 1252338 - G 73 -7.7 -4.11346 | gap 1, opp_overlap 1252336 1252332, overlap 1252332 ACAGCGAAACAAGAA TGCCGCCTATGCTGTTTT GGT ACAGCAGC-TCGGCGGCA TCTTGTTCTGTGCTT Patl_1049 1254187 - 1252499 - | hypothetical protein Patl_1050 1254453 - 1255289 + | putative signal transduction protein TERM 1269 1255324 - 1255340 + T 100 -12.3 -5.18355 | opp_overlap 1255324 GTGTATTAGCGAAAA GCCAGCA TCA TGCTGGC TTTTTAGTTTTTAAA TERM 1270 1255340 - 1255324 - T 100 -12.3 -4.21194 | opp_overlap 1255324 GTGTATTAGCGAAAA GCCAGCA TCA TGCTGGC TTTTTAGTTTTTAAA rdgC 1256270 - 1255365 - | recombination associated protein TERM 1271 1255419 - 1255404 - G 70 -9 -3.37901 | opp_overlap 1255403 AAATATCTCAACTAA GCGCTT TGAA AAGCGC ACTATTTCAGCAGAC Patl_1052 1258109 - 1256370 - | periplasmic sensor signal transduction histidine kinase Patl_1053 1258355 - 1259044 + | two component transcriptional regulator TERM 1272 1259136 - 1259156 + G 84 -7.5 -4.8269 | opp_overlap 1259135, overlap 1259125 1259124 1259137 TCATGGCTTAGAAGC CTAGGCCGT TTA GCGGCCTAC TTTTTGGTGGTTATC TERM 1273 1259137 - 1259155 + G 82 -11 -3.48529 | opp_overlap 1259135, overlap 1259125 1259124 1259136 CATGGCTTAGAAGCC TAGGCCGT TTA GCGGCCTA CTTTTTGGTGGTTAT Patl_1054 1259106 - 1260416 + | histidine kinase TERM 1274 1262128 - 1262146 + G 80 -6 -5.09225 | TATTTCAGCATTTGA TGCCTCTA CAC TAGATGCA TTTTTTGAGTCAACT Patl_1055 1260653 - 1262254 + | hypothetical protein TERM 1275 1262299 - 1262268 - f 87 -12.4 -3.34005 | opp_overlap 1262274, overlap 1262274 AACCAATTTGCATAA GATAAATAGGCGCC TAGG AGCGCCTATTTTTC GATTTATAGCTAGGA TERM 1276 1262293 - 1262274 - f 89 -10 -4.27117 | opp_overlap 1262274, overlap 1262268 TTTGCATAAGATAAA TAGGCGCC TAGG AGCGCCTA TTTTTCGATTTATAG TERM 1277 1262274 - 1262293 + F 90 -9.3 -4.84529 | opp_overlap 1262268 1262274 TTTGCATAAGATAAA TAGGCGC CTAGGA GCGCCTA TTTTTCGATTTATAG TERM 1278 1263742 - 1263762 + G 71 -9.7 -3.17571 | ACATGAAATCTTGGG GAGGAAACG TCA CGCTTCCTC TTACCTTCAAGAATT Patl_1056 1262322 - 1264988 + | TonB-dependent receptor TERM 1279 1265008 - 1265025 + T 100 -11.3 -5.50499 | opp_overlap 1265008 ATTTGGTTTTCAAAA TAGCCGC ATTA GCGGCTA TTTTTTTGCCTGTGA TERM 1280 1265025 - 1265008 - T 90 -11.3 -4.07687 | opp_overlap 1265008 ATTTGGTTTTCAAAA TAGCCGC ATTA GCGGCTA TTTTTTTGCCTGTGA Patl_1057 1265750 - 1265043 - | lipase, class 2 TERM 1281 1267426 - 1267436 + G 73 -2.4 -5.10933 | opp_overlap 1267409, overlap 1267410 CGGCGCGGCCTTATT AGCC GCC GGCA TTTTGTTTTACGTCG Patl_1058 1265921 - 1267972 + | iron permease FTR1 TERM 1282 1267998 - 1268015 + T 100 -9.9 -5.24129 | opp_overlap 1267998 CGAGCGCATAAAAAA GGCAGAT GATT ATCTGCC TTTTTTGTGAACGGG TERM 1283 1268015 - 1267998 - T 100 -9.9 -5.26316 | opp_overlap 1267998 CGAGCGCATAAAAAA GGCAGAT GATT ATCTGCC TTTTTTGTGAACGGG Patl_1059 1270399 - 1268066 - | TonB-dependent receptor TERM 1284 1269206 - 1269222 + g 72 -6.6 -4.21631 | AAGGGCATCGTCAGT TTCGCT GGCCA AGCGAA TTTCTTGCGTAAATT TERM 1285 1270949 - 1270973 + G 72 -5 -4.56358 | ACCACTATGTTATCA GCCAGCTTAC TCAGT GTAAGTTTGC TTTTATCTGCATCTG Patl_1060 1270925 - 1271695 + | hypothetical protein Patl_1061 1271703 - 1273112 + | MotA/TolQ/ExbB proton channel Patl_1062 1273124 - 1273645 + | MotA/TolQ/ExbB proton channel TERM 1286 1274007 - 1273997 - g 79 -3.2 -5.27923 | CAAGCGGATAAAAAA TCGA CTA CCGA AACCTTAATTAAGGT Patl_1063 1273676 - 1274083 + | biopolymer transport protein ExbD/TolR Patl_1064 1274087 - 1274695 + | TonB family protein TERM 1287 1274996 - 1275017 + G 70 -2.3 -4.93877 | gap 1, overlap 1274978 1274974 ACAGCTATGAGCTGG CCAT-GATGT ATA ACTTCTATGG TTTTATTTACTACAA Patl_1065 1274707 - 1276050 + | tetratricopeptide TPR_2 TERM 1288 1276150 - 1276186 + F 100 -11 -5.22039 | gap 1 GCAGAGAACCTCTCA CCGCTCATACGTTGTCT TAAT AGGCAGTGT-TGAGCGG TTTTTTACGTTTAAC Patl_1066 1276355 - 1276924 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1289 1276973 - 1276946 - f 75 -9.8 -3.33696 | overlap 1276947 1276970 GCGTGCGTTAAGTAA GGGCTGGCTAGA GTGT TCAAGCCAGCCA ATTACCATCAATTAG TERM 1290 1276972 - 1276947 - f 90 -13.3 -2.60075 | overlap 1276946 1276970 CGTGCGTTAAGTAAG GGCTGGCTAGA GTGT TCAAGCCAGCC AATTACCATCAATTA Patl_1067 1277044 - 1278651 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1291 1278753 - 1278780 + F 100 -13.6 -5.15969 | gap 1 TGTGTGACACCCTTT GCCGAG-CATATC TGA GATATGTCTCGGC TTTTTTACGTTAGCA Patl_1068 1279154 - 1279744 + | hypothetical protein Patl_1069 1279741 - 1282479 + | glycoside hydrolase family protein TERM 1292 1282581 - 1282602 + T 100 -11.5 -5.30616 | opp_overlap 1282582, overlap 1282582 ATAGTAGATACAAAA ACGCCGAGC AATT GCTCGGCGC TTTTTATTTAACTAA TERM 1293 1282582 - 1282601 + T 100 -15 -3.77285 | opp_overlap 1282582, overlap 1282581 TAGTAGATACAAAAA CGCCGAGC AATT GCTCGGCG CTTTTTATTTAACTA TERM 1294 1282601 - 1282582 - T 100 -15 -5.05601 | opp_overlap 1282582 1282581 TAGTAGATACAAAAA CGCCGAGC AATT GCTCGGCG CTTTTTATTTAACTA Patl_1070 1284035 - 1282626 - | sugar transferase TERM 1295 1283388 - 1283414 + g 71 -8 -3.99347 | opp_overlap 1283397, overlap 1283409 GGCGCTCATGGGCAT GGCGATATAGAT GTA ATCTACCTCGCC TTCTTTGGCTAGTTT TERM 1296 1283996 - 1283976 - G 70 -9.8 -3.03969 | opp_overlap 1283975 1283976 1283978, overlap 1283957 1283978 1283980 ATCGACTAAACGATA CAGAGTAG AAAAA CTACTCTG GTTACTTTGAATTAT TERM 1297 1284012 - 1284022 + g 88 -8.2 -4.79352 | opp_overlap 1284011 GTTACTTTGAATTAT GCCC CCG GGGC TTTTGTTATGCATGA TERM 1298 1284255 - 1284276 + H 86 -2.3 -5.94743 | overlap 1284257 ATTGTACCACGCTAA TCTGTTGTA TAAT TACGACATA TTTTTGTTTTTTTTA TERM 1299 1284257 - 1284274 + H 71 -4.9 -4.51984 | overlap 1284255 TGTACCACGCTAATC TGTTGTA TAAT TACGACA TATTTTTGTTTTTTT TERM 1300 1284573 - 1284592 + H 75 -5.8 -4.78149 | CTCATGGGCACTATT GTGAAAGT AGTA ATTTTCAC TTTTTCAATTATCAA Patl_1071 1284958 - 1286100 + | hypothetical protein Patl_1072 1286124 - 1286660 + | polysaccharide export protein TERM 1301 1286785 - 1286795 + G 80 -5.4 -5.09204 | TCTTTGGCGTATTAT TAGC TTA GCTA TTTTTATTACGGTAT TERM 1302 1287288 - 1287269 - g 83 -10.8 -3.67517 | opp_overlap 1287266 1287269, overlap 1287262 CATGAAGACCGCAAA TTTGCAGC TATA GCTGCAAA TGCTGTTGGCGATGT TERM 1303 1287269 - 1287288 + G 71 -10.8 -2.74701 | opp_overlap 1287262 1287269, overlap 1287266 CATGAAGACCGCAAA TTTGCAGC TATA GCTGCAAA TGCTGTTGGCGATGT Patl_1073 1286678 - 1288945 + | protein-tyrosine kinase Patl_1074 1288942 - 1289670 + | PHP-like Patl_1075 1289661 - 1290404 + | hypothetical protein Patl_1076 1290865 - 1290461 - | hypothetical protein Patl_1077 1292163 - 1290862 - | O-antigen polymerase TERM 1304 1292357 - 1292339 - R 100 -14.6 -5.73978 | opp_overlap 1292339 ATTATAAACAAAAAA GCCAGCGA AAA TCGCTGGC TTTTAAAAATACTAA TERM 1305 1292339 - 1292357 + r 100 -14.6 -4.12188 | opp_overlap 1292339 ATTATAAACAAAAAA GCCAGCGA AAA TCGCTGGC TTTTAAAAATACTAA Patl_1078 1293022 - 1292378 - | hypothetical protein Patl_1079 1295253 - 1293262 - | diguanylate cyclase/phosphodiesterase TERM 1306 1294299 - 1294289 - G 72 -5.4 -4.50583 | AATAGCATCACAAAA TCAG CCC CTGA AACCCTAAACAAGGT TERM 1307 1294459 - 1294479 + g 79 -10.5 -3.61398 | ATAACCCTGTGAATG TTGCTCGCT ATC AGCGAGTAA TTGTTCAAAAGCCAG Patl_1080 1295922 - 1295275 - | periplasmic protein TERM 1308 1297755 - 1297768 + G 71 -9.5 -3.14463 | opp_overlap 1297754 1297753 GACGTCATTGAAAGC CGCGC AAAT GCGCG TTCGTGGGGGGGCTT Patl_1081 1296393 - 1298954 + | hypothetical protein Patl_1082 1299125 - 1299760 + | hypothetical protein TERM 1309 1299803 - 1299836 + T 85 -11.3 -3.41581 | opp_overlap 1299812, overlap 1299804 1299812 GGGGTAAGACGGACT ATTATTAAAGGCAAT TATT ATTGCCTTTAATAAC TTAATTCATACGTTG TERM 1310 1299804 - 1299835 + T 95 -14.8 -2.64466 | opp_overlap 1299812, overlap 1299803 1299812 GGGTAAGACGGACTA TTATTAAAGGCAAT TATT ATTGCCTTTAATAA CTTAATTCATACGTT TERM 1311 1299812 - 1299827 + T 71 -7.6 -3.80516 | opp_overlap 1299812, overlap 1299804 1299803 CGGACTATTATTAAA GGCAAT TATT ATTGCC TTTAATAACTTAATT TERM 1312 1299827 - 1299812 - T 71 -7.6 -3.80573 | opp_overlap 1299812 1299804 1299803 CGGACTATTATTAAA GGCAAT TATT ATTGCC TTTAATAACTTAATT Patl_1083 1301398 - 1299944 - | polysaccharide biosynthesis protein TERM 1313 1300182 - 1300171 - G 86 -3 -5.63645 | opp_overlap 1300171 GGAAAACAGAAAAAA TCAA TTTC TTGA TATTAATTGAAACGT TERM 1314 1301775 - 1301804 + H 76 -4.5 -5.02716 | gap 1, opp_overlap 1301778 1301798, overlap 1301776 1301798 AGATATTAGCGGGTA ACATTTGATTTTGA ACA TCAAA-TCAAATGG TTTTGCTTTTTTTTT Patl_1084 1301914 - 1303821 + | acyltransferase 3 TERM 1315 1303858 - 1303888 + T 71 -9.7 -2.86618 | overlap 1303857 TGCAAGATTGCGCGT ATCCTAGCAGGCG CGTTA CACCTGCTAGGAC CTTTACATATTAATT Patl_1085 1304985 - 1303915 - | glycosyl transferase, group 1 TERM 1316 1304696 - 1304683 - G 100 -4.5 -5.86061 | GGTGAGTAAAAAAAA CAGCA AATT TGCCG GGTGATAAGTGATAA TERM 1317 1304768 - 1304755 - G 85 -6.7 -5.13354 | TTTATAAAAAACAAA CGCTT TATT AAGCG TAGCGAGAAAGCCCG Patl_1086 1306010 - 1305039 - | hypothetical protein Patl_1087 1306704 - 1307696 + | NAD-dependent epimerase/dehydratase Patl_1088 1307943 - 1308770 + | WecB/TagA/CpsF family glycosyl transferase Patl_1089 1308780 - 1309871 + | glycosyl transferase, group 1 TERM 1318 1310606 - 1310590 - g 72 -8.7 -3.81414 | opp_overlap 1310589, overlap 1310591 AGGGTGAACTAAGAA CTGCGCT ACA AGCGCAA ATTGATCGACTGGAC Patl_1090 1309875 - 1311002 + | glycosyl transferase, group 1 TERM 1319 1311268 - 1311280 + G 72 -2.6 -5.08601 | GAGTTTATGGTGGTG GGTG CTAAT CGCC TTTTTCTTAGCGTCC Patl_1091 1311017 - 1312306 + | exopolysaccharide production protein TERM 1320 1312892 - 1312915 + G 77 -10.4 -3.39327 | opp_overlap 1312891 1312894 CTCAATTAGCAAAGG TAGGTGGTGT GTAT ACACTACCTA TTGTGACTGTGAAAA TERM 1321 1313052 - 1313070 + G 71 -3.8 -4.81851 | GCTTGCAGACATATG GTTGACCA ATG TCGTCGAC TTTTTCCGTTTAAGT Patl_1092 1312303 - 1313250 + | glycosyl transferase family protein TERM 1322 1313299 - 1313315 + T 71 -3.7 -4.93696 | overlap 1313296 AACGATTCAGGCCTT TTGTCTT TAA AAGTCAA TTTTTACTATTTAGG Patl_1093 1314410 - 1313415 - | acyltransferase 3 TERM 1323 1314690 - 1314706 + H 71 -3.8 -4.95957 | TACGAACTTTCTTAC CTAATA AGCGG TATTAG TTTTTCCTTGATTTC TERM 1324 1315191 - 1315176 - g 93 -6.2 -5.72622 | overlap 1315184 TTTAGAAAGAAAAAA GATGAA AGGT TTCATC AAAACGAGTTAGAAA Patl_1094 1315152 - 1315976 + | GumL TERM 1325 1316250 - 1316263 + G 74 -8.1 -3.90738 | opp_overlap 1316250, overlap 1316243 TTTATATAGCTAGAA GAGCC CTGA GGCTC TTTCCTGCTTATTTG Patl_1095 1316024 - 1317169 + | acyltransferase 3 TERM 1326 1317224 - 1317250 + T 71 -6.5 -4.30001 | gap 1, overlap 1317220 1317225 TGCATATACACTCGG CGCGACGGCATG TATT CG-GCCGTCGCC TTATTTGCTTTTTTA TERM 1327 1317225 - 1317249 + T 75 -10 -3.1556 | gap 1, overlap 1317224 1317220 GCATATACACTCGGC GCGACGGCATG TATT CG-GCCGTCGC CTTATTTGCTTTTTT Patl_1096 1319274 - 1317430 - | acyltransferase 3 Patl_1097 1320021 - 1319374 - | hypothetical protein TERM 1328 1321173 - 1321183 + G 80 -5.4 -5.03715 | CGTATTGTGCTGACC CAGA AAA TCTG TTTTTTGAGAGTAAT Patl_1098 1320773 - 1321690 + | hypothetical protein TERM 1329 1322267 - 1322254 - g 70 -2.3 -5.07275 | opp_overlap 1322257, overlap 1322255 TGATATATACAAAAA GCTCG CTGA CGAGG CGTTCGCTGGCCTAC Patl_1099 1321970 - 1322884 + | hypothetical protein Patl_1100 1323322 - 1324146 + | xanthan biosynthesis pyruvyltransferase GumL TERM 1330 1324138 - 1324156 + F 74 -5.2 -4.67353 | CCGTTTGATTTATGG GCGCAGTA AAC TACGGTGC TTTTTGCGTAAATAA TERM 1331 1324341 - 1324355 + F 73 -10 -2.86651 | opp_overlap 1324332, overlap 1324340 TAATGAGCTGTTACT CTGGTG AGT CACCAG CTTCTTCCATTCTTT TERM 1332 1325418 - 1325405 - g 77 -3.9 -5.17576 | GATTAAGCTAAAAAA TAAGT ACAA ACTTA AACATCATTTTGTGC Patl_1101 1324578 - 1326056 + | hypothetical protein Patl_1102 1326404 - 1328806 + | hypothetical protein TERM 1333 1328843 - 1328822 - T 80 -10.3 -3.61715 | opp_overlap 1328822 CACCTCTCGCAATAA GCTATTAAG TGCG CTTAATAGC TTATGCTCAAGTCAT TERM 1334 1328822 - 1328843 + T 77 -10.3 -3.4178 | opp_overlap 1328822 CACCTCTCGCAATAA GCTATTAAG TGCG CTTAATAGC TTATGCTCAAGTCAT Patl_1103 1329430 - 1329011 - | hypothetical protein Patl_1104 1330879 - 1329512 - | coproporphyrinogen III oxidase TERM 1335 1330823 - 1330835 + g 71 -7.7 -3.92746 | overlap 1330821 AGACGTATATCGCGG TCCAC GAA GTGGA TATTTTTCAAGTAAA TERM 1336 1331010 - 1330965 - R 100 -20.1 -3.38966 | opp_overlap 1330968 1330972 1330978, overlap 1330968 1330972 AAAATTGATCTAGAA CAATAAACCACAAGGCTGA AATATGAG TCAGCCTTGTGGTCTATTG ATAGGCGGGAGTTAG TERM 1337 1331007 - 1330968 - R 100 -16 -3.82378 | opp_overlap 1330968 1330972 1330978, overlap 1330965 1330972 ATTGATCTAGAACAA TAAACCACAAGGCTGA AATATGAG TCAGCCTTGTGGTCTA TTGATAGGCGGGAGT TERM 1338 1330968 - 1331007 + r 93 -13.8 -3.14211 | opp_overlap 1330968 1330965 1330972, overlap 1330972 1330978 ATTGATCTAGAACAA TAAACCACAAGGCTGA AATATGAG TCAGCCTTGTGGTCTA TTGATAGGCGGGAGT TERM 1339 1331003 - 1330972 - R 100 -14.6 -4.52415 | opp_overlap 1330968 1330972 1330978, overlap 1330968 1330965 ATCTAGAACAATAAA CCACAAGGCTGA AATATGAG TCAGCCTTGTGG TCTATTGATAGGCGG TERM 1340 1330972 - 1331003 + r 100 -14.6 -3.12895 | opp_overlap 1330972 1330968 1330965, overlap 1330968 1330978 ATCTAGAACAATAAA CCACAAGGCTGA AATATGAG TCAGCCTTGTGG TCTATTGATAGGCGG Patl_1105 1332441 - 1331029 - | hypothetical protein TERM 1341 1331581 - 1331601 + g 78 -5.5 -4.82901 | opp_overlap 1331588 GTTCAGGGTGATTTC GGCAATA GCAACCG TATTGCC TTTTTCTACCCCGGG TERM 1342 1331886 - 1331900 + g 82 -2.8 -5.48303 | CTTTGATGTTATCCG TTAACG AGT CGATAA TTTTTTTCGGATTCT Patl_1106 1333830 - 1332556 - | phosphodiesterase I TERM 1343 1333640 - 1333665 + g 71 -9.8 -3.14132 | gap 1 TTCGTTGGCATCGCT GGCGTCA-TGC TTTTT GCAGTGACGCC TTGCTGCCCAAGGGC TERM 1344 1334859 - 1334876 + G 79 -4.1 -5.12172 | GTAACTGGGATTTAG TCGGTAA CAAC TTCCCGA TTTTCTTTATTCGTG TERM 1345 1334941 - 1334974 + G 72 -3.1 -5.02502 | gap 1, opp_overlap 1334947, overlap 1334943 TAAGCCGTCACCCGT GACGAACAAACAAAGC GCA GCAC-GTTTGTTCGAC TTTTTCTCTCATGTG Patl_1107 1334429 - 1336039 + | catalase Patl_1108 1336224 - 1336817 + | ankyrin TERM 1346 1337053 - 1337071 + F 72 -10.2 -2.7386 | opp_overlap 1337052, overlap 1337055 ATGGAATGAAAAGCG GGGTGCGC TGG GCGCGCTC TAATTGGAATCACTT Patl_1109 1337108 - 1338571 + | cold-shock regulated carbon starvation protein A TERM 1347 1338635 - 1338616 - T 77 -7.9 -4.258 | opp_overlap 1338616, overlap 1338604 TGACTGATTAACAAA GCTAACC CGAAAC GGTTAGC TTTTTTTATGGGAAG TERM 1348 1338616 - 1338635 + T 100 -7.9 -5.60993 | opp_overlap 1338604 1338616 TGACTGATTAACAAA GCTAACC CGAAAC GGTTAGC TTTTTTTATGGGAAG TERM 1349 1338687 - 1338704 + T 93 -11.3 -4.28774 | opp_overlap 1338676 1338687 TTAACCCTTAAAAAA GGGATGC CGCG GCATCCC TTTTGAGTTAGATAA TERM 1350 1338704 - 1338687 - T 95 -11.3 -5.055 | opp_overlap 1338687, overlap 1338676 TTAACCCTTAAAAAA GGGATGC CGCG GCATCCC TTTTGAGTTAGATAA Patl_1110 1340625 - 1338748 - | TonB-dependent receptor TERM 1351 1339690 - 1339678 - G 70 -9.1 -3.36823 | opp_overlap 1339675 1339678 GGCGCCAAAACTGAA CACGC CTT GCGTG TAATTGTTGCGCTCA Patl_1111 1342527 - 1341544 - | hypothetical protein TERM 1352 1341819 - 1341832 + g 71 -3.7 -4.90525 | CAAGTGAATAGCTGA CGCCC TTAG GGGAG TTTTGTTTCGGATTG Patl_1112 1344117 - 1342810 - | DSBA oxidoreductase TERM 1353 1343004 - 1343025 + g 70 -2.2 -4.93365 | overlap 1343008 ACTCAAGGCCACTGC GCTGTGCG ATGATG CGCATACC TTTTTCGTTGTCAGC TERM 1354 1344244 - 1344260 + H 74 -6.5 -4.33819 | opp_overlap 1344243 ATATGTGGCCAAAGC GCTGACC TGT GGTAAGC TTTGTTCTCACTCGT Patl_1113 1344290 - 1345309 + | AraC family transcriptional regulator TERM 1355 1345318 - 1345359 + T 71 -6.1 -4.14725 | opp_overlap 1345320, overlap 1345320 TTTTTAGTGTGGACA AATTGTTAAGGTAATTG ACGTCCAG CAATTACCTTAACCATA TTTGTAATTTGACTA TERM 1356 1345357 - 1345320 - T 77 -8.7 -3.86897 | opp_overlap 1345318 1345320 TTTAGTGTGGACAAA TTGTTAAGGTAATTG ACGTCCAG CAATTACCTTAACCA TATTTGTAATTTGAC TERM 1357 1345320 - 1345357 + T 73 -8.7 -3.66216 | opp_overlap 1345320, overlap 1345318 TTTAGTGTGGACAAA TTGTTAAGGTAATTG ACGTCCAG CAATTACCTTAACCA TATTTGTAATTTGAC Patl_1114 1346794 - 1345397 - | dehydrogenase catalytic domain-containing protein Patl_1115 1349496 - 1346797 - | 2-oxoacid dehydrogenase subunit E1 TERM 1358 1348264 - 1348284 + g 76 -2.5 -5.37593 | overlap 1348265 CATTTTTCCTTGTCC AGCTTCG CCCATAC CGAAGCC TTTTTTGGTTTGGGC TERM 1359 1349799 - 1349816 + H 71 -6.9 -3.97308 | AAATTCATTGTGTCG CCTCGCC TAGA GGGGAGG TTTAATGTGTTTCAA Patl_1116 1350205 - 1351659 + | hypothetical protein TERM 1360 1351698 - 1351723 + F 77 -8.3 -3.81879 | CTGATTTTACTCTCA GCTAAGTGCGT TAGA GCGTGCTTAGC TTCTTCCATTTTAGC TERM 1361 1353785 - 1353799 + G 76 -8.5 -4.12902 | overlap 1353795 AGATCTTTGGGCTGG GCCGC TGACT GCGGC TTTTGGCGCTGATTA Patl_1117 1352175 - 1354994 + | TonB-dependent receptor TERM 1362 1355979 - 1355965 - g 77 -11.4 -3.21695 | TGATGATGAACTCAA GTCGGC ACA GCCGAC AGACGTAAATACTCA Patl_1118 1355270 - 1356508 + | citrate carrier protein Patl_1119 1356525 - 1357883 + | hypothetical protein TERM 1363 1357947 - 1357914 - g 76 -5.3 -4.91109 | opp_overlap 1357922, overlap 1357922 TTGCTATGACAAAAA CTAAAACACTTGGTC AGTT GGCCAAGTTTCTCAG AAGTAAAAATGCGGG TERM 1364 1357922 - 1357939 + G 71 -7.7 -3.86897 | opp_overlap 1357922 1357914 ACAAAAACTAAAACA CTTGGTC AGTT GGCCAAG TTTCTCAGAAGTAAA Patl_1120 1357904 - 1358227 + | hypothetical protein Patl_1121 1358477 - 1359487 + | LysR family transcriptional regulator Patl_1122 1360017 - 1359562 - | MarR family transcriptional regulator Patl_1123 1361663 - 1360350 - | fumarylacetoacetase TERM 1365 1361269 - 1361254 - G 80 -5.4 -4.98857 | opp_overlap 1361254 ATTGAAGTATAAAAA TCAGTG TAAT CACCGA TTGTGCAAGGCATTG TERM 1366 1361516 - 1361547 + g 83 -6.6 -5.00616 | gap 1, opp_overlap 1361516 TGACGTATTTACCAA TAGCGAC-ACCGCCT CGA ACGCGTTCGTCGCTA TTTTTTCGGCGAAAC Patl_1124 1362259 - 1361729 - | glyoxalase/bleomycin resistance protein/dioxygenase Patl_1125 1363409 - 1362333 - | 4-hydroxyphenylpyruvate dioxygenase Patl_1126 1364238 - 1363771 - | hypothetical protein Patl_1127 1366482 - 1364347 - | oxidoreductase FAD-binding region TERM 1367 1366276 - 1366261 - G 74 -10.4 -3.16564 | GGGGGACTGCACGAA GCCTGG CTTT CCAGGC AAAATAGACGCCCAA Patl_1128 1367196 - 1366576 - | glutathione S-transferase-like TERM 1368 1368208 - 1368195 - g 79 -9.5 -3.76224 | GGTGTATGCATCAAA CCGGC ATCT GCCGG CACGCATTAGAGCAT Patl_1129 1367374 - 1368270 + | LysR family transcriptional regulator Patl_1130 1369332 - 1368280 - | aminotransferase, class I and II Patl_1131 1370527 - 1369472 - | cobalamin biosynthesis protein CobD Patl_1132 1371275 - 1370550 - | phosphoglycerate mutase Patl_1133 1372339 - 1371290 - | periplasmic binding protein TERM 1369 1371871 - 1371882 + g 71 -7.2 -4.08216 | GTGCTAAATCATCTC CCGG ATTA CCGG TTTTCCAAGCAATCA Patl_1134 1372971 - 1372339 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 1370 1372914 - 1372929 + g 91 -2.5 -5.9663 | GCATACGTGCTTTAT GGCGA TGGTTT TCGTC TTTTTTTTCGTCTTT Patl_1135 1374580 - 1372976 - | cobyric acid synthase CobQ Patl_1136 1375284 - 1374577 - | phosphoglycerate mutase TERM 1371 1375209 - 1375161 - G 100 -23.5 -3.15544 | opp_overlap 1375161, overlap 1375144 1375143 CGCTAGGGCCATCAA CTTGACCATGGCGCAGCAA ATTGAACGTGG TTGCTGCGCCATGGTCAAG TTGATGGCTACCCAC TERM 1372 1375161 - 1375209 + g 100 -23.5 -3.18264 | opp_overlap 1375144 1375143 1375161 CGCTAGGGCCATCAA CTTGACCATGGCGCAGCAA ATTGAACGTGG TTGCTGCGCCATGGTCAAG TTGATGGCTACCCAC Patl_1137 1375880 - 1375326 - | cobalbumin biosynthesis enzyme Patl_1138 1376775 - 1375966 - | cobalamin 5'-phosphate synthase Patl_1139 1377944 - 1376811 - | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase TERM 1373 1377818 - 1377829 + g 72 -3 -4.95167 | overlap 1377808 1377808 GCTGGCCTAGGGCCC CTAA GGGT TTAG TTTTATTGTTAATTC Patl_1140 1379205 - 1378183 - | transport system permease protein TERM 1374 1378822 - 1378810 - G 72 -4.7 -4.57073 | overlap 1378797 TACTGCGCCTAAAAA GGCGG CGA CCGGC AGTGCGATTGAAAAA Patl_1141 1380113 - 1379202 - | ABC transporter related TERM 1375 1379716 - 1379737 + g 77 -10.9 -3.14211 | GTTTGATGCGTTTTA TCGCTAAGG CCTA CCTTGGCGA TTGATGCCGCGAGGT TERM 1376 1379922 - 1379934 + g 71 -3.4 -4.76644 | overlap 1379906 AAGTGCTTTGCCGCA CCAA TCCAC TTGG TTTTTACTGGCTGTT Patl_1142 1380640 - 1382775 + | TonB-dependent siderophore receptor TERM 1377 1383150 - 1383164 + G 73 -2.1 -5.1861 | gap 1, opp_overlap 1383150 CTTGATGGAGATGAA C-AGCG CCAC CGCTTG TTTTTTCATCCTACC TERM 1378 1383204 - 1383223 + G 79 -7.8 -4.4572 | TACCTTGGAGATGGG CGCTGGCA AAAC TGGCAGCG TTTCTTTCGCATGTT TERM 1379 1383693 - 1383710 + G 71 -7 -4.06179 | opp_overlap 1383690 GCAGATGCAATACTT GTTCGC CCAAGA GCGAAC TTTGTCAGTTTTGAA TERM 1380 1384024 - 1384039 + G 73 -4.6 -4.90477 | TAGGCGTAATGGCCA GTGTCG GTTA CGGCGC TTTTACTTTTTTATA Patl_1143 1382922 - 1384055 + | PepSY-associated TM helix Patl_1144 1384664 - 1384191 - | stress responsive alpha-beta barrel Patl_1145 1385553 - 1385882 + | hypothetical protein Patl_1146 1386665 - 1386000 - | hypothetical protein TERM 1381 1386204 - 1386217 + g 70 -5.3 -4.41348 | GCTGGAAAAGTCTTC TGAGT TTAA ACTCA TTTCTTTAAGCAGGG TERM 1382 1386881 - 1386894 + H 71 -3.8 -4.93696 | opp_overlap 1386881, overlap 1386869 TTATTAGCTGAACCA GCCA ATTGTG TGGC TTTTTAATATTTCGG Patl_1147 1386943 - 1387257 + | hypothetical protein TERM 1383 1387269 - 1387312 + F 88 -11.2 -3.53031 | gap 1, opp_overlap 1387291 1387293, overlap 1387271 ATGAGTATTGAAGCC TGTTTACTGGATGTGTTAACG ATA CGTTAGCGCAGCCAGTAA-CG TTAATTTCCCATCCG TERM 1384 1387271 - 1387311 + F 83 -12.7 -2.71497 | opp_overlap 1387291 1387293, overlap 1387269 GAGTATTGAAGCCTG TTTACTGGATGTGTTAACG ATA CGTTAGCGCAGCCAGTAAC GTTAATTTCCCATCC Patl_1148 1387527 - 1390550 + | TonB-dependent receptor, plug TERM 1385 1390601 - 1390574 - f 88 -11.4 -3.53298 | opp_overlap 1390579, overlap 1390579 ATTATTCGAAATTAA TAAAACGGCAAC TTCG GTTGCCGTTTTT ATCTTTTGTCTGAAC TERM 1386 1390596 - 1390579 - f 95 -11.3 -4.84642 | opp_overlap 1390579, overlap 1390574 TCGAAATTAATAAAA CGGCAAC TTCG GTTGCCG TTTTTATCTTTTGTC TERM 1387 1390579 - 1390596 + F 100 -11.3 -5.32599 | opp_overlap 1390574 1390579 TCGAAATTAATAAAA CGGCAAC TTCG GTTGCCG TTTTTATCTTTTGTC TERM 1388 1390786 - 1390808 + F 85 -7.6 -4.93661 | overlap 1390767 CGCATCCTGGATGGG GGACTTTGCC TCT GGCATCGTCC TTTTATTCTTAGTAT Patl_1149 1390989 - 1391708 + | response regulator receiver protein Patl_1150 1391736 - 1392875 + | signal transduction histidine kinase, LytS Patl_1151 1392872 - 1393702 + | response regulator receiver protein TERM 1389 1394648 - 1394674 + G 70 -9.5 -2.99471 | gap 2, opp_overlap 1394633 CCGCGGTAACTTGGC GGCTGGCGGCACG GGG CGTGC-GC-AGCC TCTGTCTGAAAGTGA Patl_1152 1393935 - 1394897 + | glutathione synthetase Patl_1153 1394887 - 1395483 + | hypothetical protein Patl_1154 1395566 - 1395997 + | Holliday junction resolvase YqgF Patl_1155 1396388 - 1396801 + | redoxin Patl_1156 1396935 - 1398164 + | D-3-phosphoglycerate dehydrogenase TERM 1390 1398247 - 1398212 - T 100 -13.4 -4.53439 | opp_overlap 1398218, overlap 1398215 1398218 TCAAACTTAAACAAA GAACAAGCGCTACAGG GCAA CCTGTAGCGCTTTTTT ATACTTGTTACGCGC TERM 1391 1398244 - 1398215 - T 100 -15.1 -4.35189 | opp_overlap 1398218, overlap 1398212 1398218 AACTTAAACAAAGAA CAAGCGCTACAGG GCAA CCTGTAGCGCTTT TTTATACTTGTTACG TERM 1392 1398218 - 1398241 + T 100 -16.8 -5.4111 | opp_overlap 1398215 1398212 1398218 TTAAACAAAGAACAA GCGCTACAGG GCAA CCTGTAGCGC TTTTTTATACTTGTT TERM 1393 1398241 - 1398218 - T 100 -16.8 -4.26693 | opp_overlap 1398218, overlap 1398215 1398212 TTAAACAAAGAACAA GCGCTACAGG GCAA CCTGTAGCGC TTTTTTATACTTGTT Patl_1157 1399035 - 1398289 - | AraC family transcriptional regulator TERM 1394 1398460 - 1398484 + g 80 -7.2 -4.59109 | gap 1, opp_overlap 1398460, overlap 1398464 GACTTGAATAATGTA GTGCCTTGGGG TGAG CCCCAAG-TAC TTTTTAAACCGTCTC TERM 1395 1398464 - 1398481 + g 77 -11.3 -3.23975 | opp_overlap 1398460, overlap 1398460 TGAATAATGTAGTGC CTTGGGG TGAG CCCCAAG TACTTTTTAAACCGT TERM 1396 1399563 - 1399588 + H 73 -5.5 -4.57569 | gap 1, opp_overlap 1399569, overlap 1399569 TCGGGGCTGCTGGCG CTGAAATGCGGC AAG GGCGCATTT-AG TTTTTCGCAACGTAA TERM 1397 1399569 - 1399583 + H 70 -5.6 -4.32046 | opp_overlap 1399569, overlap 1399563 CTGCTGGCGCTGAAA TGCGGC AAG GGCGCA TTTAGTTTTTCGCAA Patl_1158 1399774 - 1400535 + | xylose isomerase-like TIM barrel Patl_1159 1401227 - 1400604 - | phosphoribosyltransferase TERM 1398 1401297 - 1401277 - H 73 -9.7 -3.14564 | opp_overlap 1401280 TCATCTCTCTATGAA GATCGCGTA CAA TACGCGTTC AATCACTTATTTATC TERM 1399 1401280 - 1401294 + H 75 -10 -3.12021 | opp_overlap 1401277 TCTCTCTATGAAGAT CGCGTA CAA TACGCG TTCAATCACTTATTT Patl_1160 1401333 - 1401899 + | phosphoribosyltransferase Patl_1161 1402713 - 1402021 - | hypothetical protein TERM 1400 1402357 - 1402343 - G 71 -7.1 -4.13014 | TCCACATGGGTAAAA CCAGC CATAC GCTGG GCACGGGTGCGAAGC Patl_1162 1402816 - 1403736 + | histone deacetylase superfamily protein Patl_1163 1403920 - 1403750 - | hypothetical protein Patl_1164 1404761 - 1404126 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type Patl_1165 1405546 - 1404989 - | hypothetical protein TERM 1401 1405156 - 1405145 - G 70 -2.2 -4.91873 | GATATCAACGAAAAA GACA TGCA TGCC TTGCCCAAGGAGTTG Patl_1166 1405719 - 1407476 + | potassium efflux system protein Patl_1167 1409090 - 1407480 - | hypothetical protein Patl_1168 1409989 - 1409090 - | protein-tyrosine kinase Patl_1169 1411569 - 1409986 - | lipopolysaccharide biosynthesis Patl_1170 1412234 - 1411599 - | polysaccharide export protein Patl_1171 1412408 - 1413820 + | sugar transferase TERM 1402 1414065 - 1414046 - g 83 -6.4 -4.91657 | AATTAATAAAAGAAA TTCACGCC CAAG GGCACGAA ATCGCCAGCCACGGG Patl_1172 1413823 - 1414668 + | polysaccharide deacetylase TERM 1403 1414905 - 1414891 - g 83 -6.4 -5.05782 | ATTTATTGTAAAAAA GAGCAA CTC TCGCTC TCAGCCATTAGACCA TERM 1404 1415449 - 1415469 + G 79 -2.6 -5.40004 | gap 1, overlap 1415440 GCTGTCGGTGCGGAT CACCTTATC TATG GATG-GGTG TTTTTTAGTTTAGTA Patl_1173 1414690 - 1416183 + | eight transmembrane protein EpsH TERM 1405 1417021 - 1417008 - g 85 -3.8 -5.56264 | TCTAAAGATAAAAAA GTCG ATAGAA CGAC AGCGTTTTTTAAGCA Patl_1174 1416195 - 1417094 + | FkbM family methyltransferase Patl_1175 1417112 - 1418128 + | acyltransferase 3 Patl_1176 1419297 - 1418164 - | hypothetical protein TERM 1406 1418355 - 1418341 - G 72 -8.6 -3.78775 | opp_overlap 1418349 TTTTGTATCAGTAAA GCGATA TTC TATCGC GTTGGGGTAGTTATG TERM 1407 1419322 - 1419336 + r 73 -5.7 -4.5287 | CCTTTACATGTACTG TGCGT TAATT ACGCA TTTTAATTACTTTCG Patl_1177 1419907 - 1419326 - | hypothetical protein Patl_1178 1421034 - 1419904 - | glycosyl transferase, group 1 Patl_1179 1421533 - 1422459 + | glycosyl transferase family protein Patl_1180 1422592 - 1423407 + | sulfotransferase Patl_1181 1423440 - 1424645 + | hypothetical protein Patl_1182 1424982 - 1424638 - | hypothetical protein Patl_1183 1426571 - 1424979 - | choline dehydrogenase-like flavoprotein TERM 1408 1425203 - 1425221 + g 76 -8.2 -4.12947 | overlap 1425205 1425206 AGAAAAGTTTCTCGC TGCGAAGA CGC TCTTCGTA TTCTTTCATTACTTT TERM 1409 1425965 - 1425951 - G 74 -5.7 -4.61747 | TGAATAATTAGAAAA GTCGA TAGAT TCGAC AGCCAAAGTTTGTGC Patl_1184 1427806 - 1426568 - | O-antigen polymerase TERM 1410 1427918 - 1427908 - R 70 -5.4 -4.39386 | TCGAAATGAGTAAAA CGAT AAT ATCG CGCATTACAATTTGA Patl_1185 1429032 - 1427974 - | acyltransferase 3 TERM 1411 1428356 - 1428313 - G 86 -4 -5.47821 | gap 1, opp_overlap 1428325 ATTGACGTAAAAAAA TAAGCTGTCTAAGTCAAACAA TTC TTGTTTCACTT-GTCTGCCTA AATACCAGTTGAACA TERM 1412 1428666 - 1428639 - G 86 -2.6 -5.66338 | AAATATAATAAAAAA CCTCTACCGTAA GGGC CCACGCTGGAGG AGTTAGCCTAGGTGT Patl_1186 1430093 - 1429176 - | glycosyl transferase family protein Patl_1187 1431562 - 1430096 - | polysaccharide biosynthesis protein TERM 1413 1431306 - 1431318 + g 76 -9.1 -3.71265 | opp_overlap 1431304 GAGATTATAAGTAGG GTGCC ATA GGCAC TTTGAATAATCTCTT Patl_1188 1432641 - 1431559 - | glycosyl transferase, group 1 TERM 1414 1432418 - 1432404 - G 79 -2.8 -5.37043 | ATTTGATATAAAAAA CTAAGT TTG ACTTGG TCCACATCAGTGGCT Patl_1189 1434565 - 1432685 - | hypothetical protein TERM 1415 1434531 - 1434513 - G 73 -4.6 -4.88786 | overlap 1434528 ACGAAAACAAATAAA TTGCTTAT CAA ATTAGCAA TACGTCGCGTTTTTT TERM 1416 1434587 - 1434598 + r 72 -4.4 -4.82154 | opp_overlap 1434587 ATTGCACTTAACAAA TGCA CTCC TGCA TTTTTACTATCAGTT Patl_1190 1436132 - 1434660 - | polysaccharide biosynthesis protein Patl_1191 1437312 - 1436158 - | glycosyl transferase, group 1 Patl_1192 1438358 - 1437309 - | hypothetical protein TERM 1417 1437841 - 1437829 - G 72 -4.9 -4.5852 | CAAGGCAAACGAAAA TCAAT ACG ATTGA ACTGCAGTACCGGGC TERM 1418 1437845 - 1437869 + g 79 -10.7 -3.58365 | CAATACGATTGAACT GCAGTACCGGG CGC CTTGGTGCTGC TTCTATCATCTGCTC Patl_1193 1439477 - 1438362 - | glycosyl transferase, group 1 TERM 1419 1439404 - 1439415 + g 73 -4.4 -4.88407 | CGTGAAGCGTCGGCT CCTA AAAT TAGG TTTTTAATTACCTGC Patl_1194 1441395 - 1439491 - | asparagine synthase (glutamine-hydrolyzing) TERM 1420 1439572 - 1439583 + g 74 -3.6 -4.99861 | GCTCCATAACACCGT GCTG TGAT CGGC TTTTTCTGCTTGATG TERM 1421 1440124 - 1440112 - G 77 -6.9 -4.55287 | GTTAGTCACATAAAA CCCCA TGG CGGGG TCTAAACTCAAACTT TERM 1422 1441458 - 1441437 - R 77 -8.1 -4.20516 | opp_overlap 1441433 TCTTTATTGAACAAA CCATTTGAT GCAT ACCAAATGG CTGGTCATCTTTACA Patl_1195 1442536 - 1441469 - | hypothetical protein Patl_1196 1443540 - 1442533 - | hypothetical protein Patl_1197 1444664 - 1443540 - | glycosyl transferase, group 1 Patl_1198 1445624 - 1444668 - | glycosyl transferase family protein TERM 1423 1445653 - 1445665 + r 93 -7.7 -5.40474 | CCTGAGTGTGTCACT GGCTA TCC TAGCC TTTTTTTGAGCCAGT Patl_1199 1448267 - 1445655 - | hypothetical protein Patl_1200 1449411 - 1448275 - | hypothetical protein TERM 1424 1448378 - 1448360 - G 76 -5.3 -4.82901 | opp_overlap 1448346 1448343 1448360, overlap 1448346 1448343 GTGGGTTGATAAAAA CAAACCA GTGTT TGGCTTG TTTCAGGGAGGTTTG TERM 1425 1449434 - 1449404 - G 87 -11.2 -3.97308 | TTGAAATATACTAAA CAGGCCAAGCAA CAAACAT TTGCTAGGCCTG CGACTGCCGTGACTT Patl_1201 1452204 - 1449448 - | tetratricopeptide TPR_2 TERM 1426 1449735 - 1449747 + g 72 -5.5 -4.46212 | CTAGCTCGATAGCTA GAGGG ATT TCCTC TTTTCTAATGGCAAG TERM 1427 1451832 - 1451813 - G 80 -7.2 -4.66537 | opp_overlap 1451815 AAGAAAGTAAACAAA GAGATACT GCTA AGTACCTC AGTATCATTACTGGT Patl_1202 1453984 - 1452356 - | 4-cresol dehydrogenase (hydroxylating) TERM 1428 1453002 - 1453015 + g 74 -3.8 -5.0133 | TTAAACTGCTTTTGG GTGG CTGAAA CCAC TTTTTTGGAGCCGTA TERM 1429 1454187 - 1454174 - R 100 -9.5 -5.64274 | opp_overlap 1454174 TGAGTTATAAAAAAA GCCGG CAAG CCGGC TTTTTGTGAAGAGTA TERM 1430 1454174 - 1454187 + r 93 -9.5 -4.83615 | opp_overlap 1454174 TGAGTTATAAAAAAA GCCGG CAAG CCGGC TTTTTGTGAAGAGTA Patl_1203 1455047 - 1454211 - | hypothetical protein TERM 1431 1454582 - 1454602 + g 70 -9.8 -2.96235 | opp_overlap 1454581 1454585, overlap 1454585 TAGCTTCAATACCAC CAACGTTC GCTAA GAACGTTG TATAATTAATATCTA Patl_1204 1456233 - 1455424 - | hypothetical protein Patl_1205 1457104 - 1456265 - | patatin Patl_1206 1457951 - 1457196 - | hypothetical protein Patl_1207 1458195 - 1458025 - | hypothetical protein TERM 1432 1458562 - 1458574 + G 78 -4.9 -5.00616 | GATCCACAGATTGTC CAATA TCA TATTG TTTTTTCGGGGACGG TERM 1433 1459014 - 1458998 - g 70 -9.5 -3.11025 | overlap 1458997 AAGAAACCAAAGAAG CGGTTTT AGA AAAACCG AGCGGCATTAGCTAT Patl_1208 1458307 - 1459089 + | peptidase S1 and S6, chymotrypsin/Hap TERM 1434 1459505 - 1459488 - g 75 -6.3 -4.44277 | gap 1 GACCAAAATTTAAAA GACTCGCT TAA AGCG-GTC AAATGGGACACTGTT Patl_1209 1459233 - 1459775 + | hypothetical protein TERM 1435 1459832 - 1459851 + G 100 -10 -5.24799 | gap 1, opp_overlap 1459832 TATATTGATTTATAA CGCCAG-CG ATT CGTCTGGCG TTTTTGTGTTTGTAC TERM 1436 1459851 - 1459832 - g 73 -10 -3.37354 | gap 1, opp_overlap 1459832 TATATTGATTTATAA CGCCAG-CG ATT CGTCTGGCG TTTTTGTGTTTGTAC Patl_1210 1459776 - 1460060 + | hypothetical protein Patl_1211 1460050 - 1460961 + | HPr kinase TERM 1437 1461598 - 1461613 + G 84 -7.6 -4.77173 | opp_overlap 1461597 CAGGCGCAATGATAT TGCACA GCGC TGTGCA TTTGTTTTATCAAGA TERM 1438 1461834 - 1461823 - g 72 -5.8 -4.42788 | overlap 1461825 CTGAATTGCATAAAA GCCA GCTT TGGC TACCACCTAAAATTA TERM 1439 1462088 - 1462055 - g 79 -9.5 -3.71924 | opp_overlap 1462055, overlap 1462078 TAAAGGAGTGAATAA GCCAGGTAGCGCG AAGAACAA CACGCCACCAGGC ATTTAACGTCTGCGT Patl_1212 1460958 - 1462094 + | hypothetical protein Patl_1213 1464290 - 1462116 - | malate synthase G TERM 1440 1464327 - 1464345 + r 73 -6.8 -4.18693 | opp_overlap 1464331, overlap 1464331 TATGAACCCAGTCTA CGAACTAA TGT TTAGTTTG TTTAATTTATGGTTT Patl_1214 1465333 - 1464389 - | LysR family transcriptional regulator TERM 1441 1465531 - 1465517 - R 70 -5.8 -4.33281 | opp_overlap 1465516 ATGTTAAAGAAATAA TCATTT TAC AAATGA ATGCTGTTTTACGAA TERM 1442 1465580 - 1465547 - R 75 -10.5 -3.14211 | opp_overlap 1465549 1465555, overlap 1465555 ATGCTGTTTTACGAA CAAAAAAATAGCAGG TTAC CCTGCTATTTTTATA CTTTGAAAGTTAGAC TERM 1443 1465549 - 1465578 + r 78 -10.9 -2.92667 | opp_overlap 1465547 1465555, overlap 1465555 GCTGTTTTACGAACA AAAAAATAGCAGG TTAC CCTGCTATTTTTA TACTTTGAAAGTTAG TERM 1444 1465572 - 1465555 - R 100 -9.9 -5.84381 | opp_overlap 1465549 1465555, overlap 1465547 TTACGAACAAAAAAA TAGCAGG TTAC CCTGCTA TTTTTATACTTTGAA TERM 1445 1465555 - 1465572 + r 93 -9.9 -5.04325 | opp_overlap 1465555 1465547, overlap 1465549 TTACGAACAAAAAAA TAGCAGG TTAC CCTGCTA TTTTTATACTTTGAA TERM 1446 1465615 - 1465589 - R 79 -10.2 -3.59262 | opp_overlap 1465589 TTTTATACTTTGAAA GTTAGACGTTAC ACT GCAACGTCGAAC TGATTCATGGTGTTG Patl_1215 1467198 - 1465597 - | isocitrate lyase TERM 1447 1466815 - 1466828 + g 75 -3.1 -5.18357 | gap 1, opp_overlap 1466815 AAGCTCTTCGATTAA CG-CAG GCA CTGACG TTTTTTCGTGCATTG TERM 1448 1468665 - 1468679 + G 78 -6.4 -4.66938 | opp_overlap 1468656, overlap 1468656 AAAAGCGCGTTAGCG GCTAAG CTT CTTGGC TTTTCTCTTAACGAT Patl_1216 1467633 - 1468922 + | alkaline phosphatase TERM 1449 1469000 - 1469023 + T 100 -14 -5.46698 | opp_overlap 1469000 CCGCCAATAAAAAAA CGCTGATAGA TTGC TCTATCAGCG TTTTTTGGTTTTCAA TERM 1450 1469023 - 1469000 - T 100 -14 -5.7946 | opp_overlap 1469000 CCGCCAATAAAAAAA CGCTGATAGA TTGC TCTATCAGCG TTTTTTGGTTTTCAA Patl_1217 1469789 - 1469091 - | hypothetical protein Patl_1218 1470483 - 1469905 - | rhomboid-like protein Patl_1219 1471714 - 1470551 - | glutathionylspermidine synthase Patl_1220 1472337 - 1471723 - | hypothetical protein Patl_1221 1472762 - 1472346 - | hypothetical protein Patl_1222 1473436 - 1472789 - | hypothetical protein Patl_1223 1474487 - 1473438 - | Ion transport 2 TERM 1451 1474465 - 1474453 - G 73 -4.1 -4.85599 | opp_overlap 1474447, overlap 1474442 CGCATCTCAGAAAAA TACTG AGA CAGCA TTTTACGTATCTTTA TERM 1452 1474647 - 1474620 - R 100 -12.7 -5.76633 | CCACAGATAAAAAAA TGGCCAGCCTG TAACTG CGGGCTGGCCA TTCAAATAATACGCA Patl_1224 1475345 - 1474665 - | phage shock protein A, PspA Patl_1225 1475750 - 1475361 - | hypothetical protein TERM 1453 1476113 - 1476097 - g 80 -10.1 -3.90112 | TTGGGGTGAACCAAA GCGCAGA CAA CCTGCGC AATAAAGTGAATAAA Patl_1226 1475937 - 1476245 + | hypothetical protein TERM 1454 1476325 - 1476303 - f 100 -8.4 -6.06529 | overlap 1476317 TACAGACAAAAAAAA GCCCAACG CAAAAGT CGCTGGGC AAAATAACAGTCAGG Patl_1227 1476482 - 1477522 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Patl_1228 1477703 - 1478815 + | queuine tRNA-ribosyltransferase yajC 1478846 - 1479184 + | preprotein translocase subunit YajC TERM 1455 1479195 - 1479230 + F 100 -17.8 -3.57561 | opp_overlap 1479201 1479205, overlap 1479197 1479201 1479205 TTTAAAATGAGTTAC CTTAAATAAAGCGGGC GATT GCCCGCTTTATTTATG TTTACGACATTCAAA TERM 1456 1479197 - 1479228 + F 100 -19 -3.36569 | opp_overlap 1479201 1479205, overlap 1479195 1479201 1479205 TAAAATGAGTTACCT TAAATAAAGCGGGC GATT GCCCGCTTTATTTA TGTTTACGACATTCA TERM 1457 1479201 - 1479224 + F 100 -15.4 -4.32857 | opp_overlap 1479201 1479205, overlap 1479197 1479195 1479205 ATGAGTTACCTTAAA TAAAGCGGGC GATT GCCCGCTTTA TTTATGTTTACGACA TERM 1458 1479224 - 1479201 - f 100 -15.4 -3.61356 | opp_overlap 1479201 1479197 1479195 1479205, overlap 1479205 ATGAGTTACCTTAAA TAAAGCGGGC GATT GCCCGCTTTA TTTATGTTTACGACA TERM 1459 1479205 - 1479220 + F 100 -11.8 -4.73432 | opp_overlap 1479201 1479205, overlap 1479201 1479197 1479195 GTTACCTTAAATAAA GCGGGC GATT GCCCGC TTTATTTATGTTTAC TERM 1460 1479220 - 1479205 - f 95 -11.8 -4.44046 | opp_overlap 1479205 1479201 1479197 1479195, overlap 1479201 GTTACCTTAAATAAA GCGGGC GATT GCCCGC TTTATTTATGTTTAC TERM 1461 1480275 - 1480295 + G 70 -9.1 -3.31144 | overlap 1480279 TGAGTACGGTATTCC TCAGGTGAA TAT TTCACTTGA TTCTAAAGGTGGCAG secD 1479262 - 1481106 + | preprotein translocase subunit SecD Patl_1231 1481117 - 1482058 + | protein-export membrane protein SecF TERM 1462 1482103 - 1482127 + T 100 -10.8 -5.20216 | AGTTGCGCATCGAGA GCCGTTTGAT TAACC ATCAAGCGGC TTTTTTAGTGGTGTG TERM 1463 1482270 - 1482253 - T 100 -12.7 -5.60993 | opp_overlap 1482253 TGGGCCACAAAAAAA GCGAGCC ATAG GGCTCGC TTTAAAAAGGTCATA TERM 1464 1482253 - 1482270 + T 90 -12.7 -3.54741 | opp_overlap 1482253 TGGGCCACAAAAAAA GCGAGCC ATAG GGCTCGC TTTAAAAAGGTCATA Patl_1232 1483102 - 1482323 - | inositol-1(or 4)-monophosphatase TERM 1465 1483062 - 1483038 - G 83 -10 -4.11692 | opp_overlap 1483059, overlap 1483041 GATTGATTTTCAAAA CCACGGGCAA TGACG TTGCCCGCAG AACGCGCCGCGCGCA TERM 1466 1483059 - 1483041 - G 73 -10.3 -3.09004 | overlap 1483038 TGATTTTCAAAACCA CGGGCAA TGACG TTGCCCG CAGAACGCGCCGCGC Patl_1233 1483339 - 1483722 + | glyoxalase/bleomycin resistance protein/dioxygenase Patl_1234 1483756 - 1484073 + | hypothetical protein Patl_1235 1484105 - 1484830 + | RNA methyltransferase Patl_1236 1484833 - 1485636 + | serine O-acetyltransferase Patl_1237 1485762 - 1486247 + | BadM/Rrf2 family transcriptional regulator Patl_1238 1486264 - 1487487 + | cysteine desulfurase IscS Patl_1239 1487551 - 1487931 + | scaffold protein Patl_1240 1487957 - 1488280 + | iron-sulfur cluster assembly protein IscA TERM 1467 1488324 - 1488307 - f 79 -8.4 -4.00042 | opp_overlap 1488307 GTGGCTATCAAAGAA GCAGGC TAACAG GCCTGC TTTTTATTAACGACG TERM 1468 1488307 - 1488324 + F 90 -9.1 -5.06414 | opp_overlap 1488307 GTGGCTATCAAAGAA GCAGGCT AACA GGCCTGC TTTTTATTAACGACG hscB 1488415 - 1488942 + | co-chaperone HscB Patl_1242 1488963 - 1490831 + | Fe-S protein assembly chaperone HscA Patl_1243 1490878 - 1491216 + | ferredoxin, 2Fe-2S type, ISC system TERM 1469 1491238 - 1491269 + F 83 -12.6 -2.87211 | gap 1, opp_overlap 1491247, overlap 1491247 ATTGTGATTTTGCTT TAACAAAAACCAGCC ATA GGCTGGTTTTT-TTA TATGTGCACGGCGGT TERM 1470 1491261 - 1491247 - f 95 -11.4 -5.06414 | opp_overlap 1491238 1491247 TTGCTTTAACAAAAA CCAGCC ATA GGCTGG TTTTTTTATATGTGC TERM 1471 1491247 - 1491261 + F 100 -11.4 -5.76633 | opp_overlap 1491247, overlap 1491238 TTGCTTTAACAAAAA CCAGCC ATA GGCTGG TTTTTTTATATGTGC TERM 1472 1491459 - 1491446 - g 70 -5.3 -4.51699 | ATAAGTACGACAAAA TGCTA GAAG TAGCA GACAACCTAGCCGAG Patl_1244 1491355 - 1491645 + | hypothetical protein TERM 1473 1491758 - 1491741 - T 89 -10.5 -4.30448 | opp_overlap 1491734 1491752 1491753 AAATGTAAGCTAAAA GGCGACC GTCA GGCCGCC TATGGCTGTTCAGTA Patl_1245 1493579 - 1491804 - | phospholipid/glycerol acyltransferase TERM 1474 1491846 - 1491860 + g 79 -2.8 -5.38549 | TTTAGTTTCTCCCTT GATGTT AGG GGCATC TTTTTCTTCTTTAGC Patl_1246 1494508 - 1493690 - | metallophosphoesterase TERM 1475 1493948 - 1493971 + g 74 -6 -4.56961 | overlap 1493950 GCACGCATGCTTATA GCGGCTAATG GCTT TATTAGCCTC TTTTATATGGCTCTT Patl_1247 1497256 - 1494644 - | UTP-GlnB uridylyltransferase, GlnD TERM 1476 1494747 - 1494762 + g 71 -6.8 -4.11692 | AAATCTTCAGCCCGC TCGCCG ATCG TGGCGA TTTTAGCCATACGTA TERM 1477 1497378 - 1497328 - R 83 -9.5 -3.93288 | gap 1, opp_overlap 1497345, overlap 1497341 1497344 GTTCATCTAATTAAA GCCTGATGACAAATAACTAATTCC GGTA AGAATTAATTATTTATCAT-AAGC TTAGAAAAGAGTTTA Patl_1248 1498195 - 1497404 - | methionine aminopeptidase, type I TERM 1478 1498133 - 1498155 + g 91 -7.6 -5.25805 | TTGTAATACATCTGC TGCGAGTCGC CCG GCAACGCGCA TTTTTTCAATTTCTT Patl_1249 1498507 - 1499238 + | ribosomal protein S2 TERM 1479 1499324 - 1499307 - f 87 -12.7 -3.40592 | opp_overlap 1499307, overlap 1499302 GACACGAAAATCTAA CAGGGGC TAAT GCCCCTG TTTTTTAATCCTAAT TERM 1480 1499307 - 1499324 + F 100 -12.7 -5.19212 | opp_overlap 1499307 1499302 GACACGAAAATCTAA CAGGGGC TAAT GCCCCTG TTTTTTAATCCTAAT TERM 1481 1499693 - 1499681 - g 72 -4.9 -4.63218 | opp_overlap 1499690, overlap 1499688 1499690 CGTCTGCTAACAAAA TCAAT GAC ATTGA AACGTTGAACGATTC tsf 1499371 - 1500243 + | elongation factor Ts TERM 1482 1500289 - 1500309 + F 100 -15.5 -5.03994 | opp_overlap 1500287 1500284 GTCATATAAACTATT GGCACCTCA AAT TGAGGTGCC TTTTTATATGTGGAC TERM 1483 1500782 - 1500804 + G 72 -6.3 -4.2461 | overlap 1500771 1500799 TGAACGGTCTAGCCA TGCGTGATG CGCTA CATCGTGCA TTTGTTAATGCCCGT pyrH 1500511 - 1501254 + | uridylate kinase Patl_1252 1501270 - 1501827 + | ribosome recycling factor Patl_1253 1501842 - 1502582 + | undecaprenyl diphosphate synthase Patl_1254 1502632 - 1503495 + | phosphatidate cytidylyltransferase TERM 1484 1503731 - 1503721 - g 80 -5.4 -5.08601 | CCAGTGGAATAAAAA CAGA GCT TCTG TCAGGCGCGCAAGCG Patl_1255 1503495 - 1504688 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Patl_1256 1504688 - 1506040 + | putative membrane-associated zinc metalloprotease TERM 1485 1506659 - 1506669 + G 74 -5.4 -4.57073 | opp_overlap 1506656 GCAGATCAACATTGT TGGT AAC ACCA TTTTTGACGACGCTA Patl_1257 1506102 - 1508576 + | surface antigen (D15) Patl_1258 1508631 - 1509146 + | outer membrane chaperone Skp (OmpH) TERM 1486 1509158 - 1509147 - f 70 -5.8 -4.39375 | AGTAAAGTAAAATAA GTCC AACA GGAC GCGCGTTAAAATCGA TERM 1487 1509378 - 1509364 - g 91 -8.5 -5.03314 | opp_overlap 1509364 GCCAGCTTGAAAAAA CGGCC GCTCA GGCCG TTATTTTAAAATCCG TERM 1488 1509364 - 1509378 + G 79 -8.5 -4.19746 | opp_overlap 1509364 GCCAGCTTGAAAAAA CGGCC GCTCA GGCCG TTATTTTAAAATCCG Patl_1259 1509189 - 1510223 + | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Patl_1260 1510265 - 1510711 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 1489 1510743 - 1510759 + G 78 -12.3 -2.63631 | GCTATCATTCATCCT TCGGCGA TTA TCGCCGA TGATGTGAAAATTGG TERM 1490 1510809 - 1510831 + G 71 -10.6 -2.67515 | opp_overlap 1510808, overlap 1510811 GCTAATGTTGAAATT GGCTCAGGCA CCG TGCTTGAGTC TCATGTGGTCGTAAA Patl_1261 1510713 - 1511483 + | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 1491 1511557 - 1511530 - g 72 -9.1 -3.53224 | opp_overlap 1511532, overlap 1511517 1511515 1511532 TAGTTGCCGGTGAAA CATCCGGCGAC ATACTA GCCGCCGGATT AATCAGCAGTATTAA TERM 1492 1511555 - 1511532 - g 82 -11.7 -3.34398 | opp_overlap 1511532, overlap 1511517 1511515 1511530 GTTGCCGGTGAAACA TCCGGCGAC ATACTA GCCGCCGGA TTAATCAGCAGTATT TERM 1493 1511532 - 1511555 + G 71 -9.5 -3.15427 | opp_overlap 1511517 1511515 1511530 1511532 GTTGCCGGTGAAACA TCCGGCGAC ATACTA GCCGCCGGA TTAATCAGCAGTATT Patl_1262 1511487 - 1512653 + | lipid-A-disaccharide synthase Patl_1263 1512654 - 1513247 + | ribonuclease H Patl_1264 1513248 - 1516715 + | DNA polymerase III, alpha subunit Patl_1265 1516764 - 1517720 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 1494 1518881 - 1518861 - g 79 -2.5 -5.63103 | overlap 1518864 TGTGAAGTAAAAAAA TTACCCTTA TCC TTAGGGGAA TTAGAGCTAAAACGT Patl_1266 1517817 - 1519211 + | tRNA(Ile)-lysidine synthetase Patl_1267 1519371 - 1520156 + | lipase, class 3 Patl_1268 1521924 - 1520383 - | response regulator receiver protein Patl_1269 1523085 - 1522222 - | diguanylate cyclase Patl_1270 1523214 - 1525187 + | sodium/hydrogen exchanger TERM 1495 1526202 - 1526188 - g 71 -10 -3.28119 | overlap 1526175 AGTCATGGATAGGAA TGGCTG GCC CAGCCA TGATCGAAGGTGGTG Patl_1271 1525296 - 1527098 + | propionyl-CoA carboxylase Patl_1272 1527170 - 1528222 + | AraC family transcriptional regulator Patl_1273 1528327 - 1528800 + | hypothetical protein Patl_1274 1529978 - 1528848 - | patatin TERM 1496 1529425 - 1529440 + g 70 -2.5 -5.06414 | overlap 1529426 GACGCCATTAAGTGC TCGCT ATGCAA AGCGG TTTTTATTCCCCGGC TERM 1497 1529909 - 1529890 - G 71 -7.9 -3.96216 | TTTCTAGGTAAATAA GTGCTGA TAGACT TCAGCAC GCCCAATTGATATGC Patl_1275 1530844 - 1530005 - | beta-lactamase-like TERM 1498 1531045 - 1531029 - R 91 -6.5 -5.52096 | opp_overlap 1531024 1531029 AAACGCAATAAAAAA GCGCAGT GTG AGTGCGC TTTTATTGTTCTGCA TERM 1499 1531029 - 1531045 + r 82 -6.5 -4.95547 | opp_overlap 1531029, overlap 1531024 AAACGCAATAAAAAA GCGCAGT GTG AGTGCGC TTTTATTGTTCTGCA Patl_1276 1532844 - 1531129 - | prolyl-tRNA synthetase TERM 1500 1531839 - 1531814 - G 75 -9.7 -3.57971 | overlap 1531815 ACAGGTATGTTTAAA CCAACCGGCCC AATA GAGCCGATTGA GCAACCGATAGTGTC TERM 1501 1531838 - 1531815 - G 73 -11 -2.74461 | overlap 1531814 CAGGTATGTTTAAAC CAACCGGCCC AATA GAGCCGATTG AGCAACCGATAGTGT TERM 1502 1532121 - 1532139 + g 73 -4.5 -4.74706 | gap 1, overlap 1532123 CTGGGCGTGAAAATT GC-GGGGC TAGT GCCTCTGC TTTTTCGATGTTAGC TERM 1503 1532787 - 1532804 + g 71 -3.3 -4.89063 | overlap 1532789 1532790 GCTGGTGGCTGATGA CTTCTGC ATCA GCAGGTG TTTCTTTTTGGGTCG Patl_1277 1533694 - 1532939 - | hypothetical protein TERM 1504 1533814 - 1533835 + H 72 -9.4 -3.03124 | opp_overlap 1533827 TTTACTTTGAGGATT CCTGCGGT TAAAGC GCCGCAGG TGTTGAAGCCTAGAG TERM 1505 1533967 - 1533997 + G 78 -12.8 -2.59079 | overlap 1533963 1533972 CGTCTAGCCTCTTCC TTGAACGTTTGATT GCA GATCAAACGTTCGA TCAGTTCCATTTCAT TERM 1506 1534865 - 1534883 + G 82 -11 -3.53012 | overlap 1534873 1534874 GGTCATGATGAATGC TGCAGCGC TTG GCGTTGCA TTTCACGCAAAGCCG Patl_1278 1533918 - 1534991 + | phosphoserine phosphatase SerB TERM 1507 1535033 - 1534993 - T 90 -8.4 -5.04249 | gap 1, opp_overlap 1534994 1534997, overlap 1534994 1534996 1534997 CGTGTAAAAAATAAA CGACTAGGGCTAAGCGCCA ATAC TGGCGCTTAG-CCTAATAC TATTCAGCGTTTAAT TERM 1508 1534994 - 1535033 + T 81 -11.4 -3.08327 | opp_overlap 1534994 1534993 1534996 1534997, overlap 1534997 GTGTAAAAAATAAAC GACTAGGGCTAAGCGCCA ATAC TGGCGCTTAGCCTAATAC TATTCAGCGTTTAAT TERM 1509 1535032 - 1534994 - T 89 -11.9 -3.61465 | gap 1, opp_overlap 1534994 1534997, overlap 1534993 1534996 1534997 GTGTAAAAAATAAAC GACTAGGGCTAAGCGCCA ATAC TGGCGCTTAG-CCTAATA CTATTCAGCGTTTAA TERM 1510 1535030 - 1534996 - T 100 -14.5 -3.36588 | gap 1, opp_overlap 1534994 1534997, overlap 1534994 1534993 1534997 GTAAAAAATAAACGA CTAGGGCTAAGCGCCA ATAC TGGCGCTTAG-CCTAA TACTATTCAGCGTTT TERM 1511 1534997 - 1535030 + T 100 -16.1 -2.75267 | opp_overlap 1534996 1534994 1534993 1534997, overlap 1534994 TAAAAAATAAACGAC TAGGGCTAAGCGCCA ATAC TGGCGCTTAGCCTAA TACTATTCAGCGTTT TERM 1512 1535029 - 1534997 - T 100 -15.8 -2.60326 | gap 1, opp_overlap 1534997 1534994, overlap 1534996 1534994 1534993 TAAAAAATAAACGAC TAGGGCTAAGCGCCA ATAC TGGCGCTTAG-CCTA ATACTATTCAGCGTT Patl_1279 1537555 - 1535033 - | type IV pilus assembly PilZ TERM 1513 1537467 - 1537496 + g 80 -12.3 -2.97386 | opp_overlap 1537458, overlap 1537458 1537493 ACCGAACCGGCAACC TGAGCCAGAATTT GACT AAACTCTGGCTCA TGTATCATGGGTTTT TERM 1514 1537493 - 1537507 + g 78 -6.4 -4.56736 | opp_overlap 1537458, overlap 1537467 1537458 TTGACTAAACTCTGG CTCATG TAT CATGGG TTTTAATTGTTCGAT TERM 1515 1538120 - 1538135 + G 73 -10.4 -2.98823 | opp_overlap 1538117 ATGTGCCAACTAGCA GCGCAG CGCA CTGCGC TATATGTCACGGGGG Patl_1280 1537769 - 1539133 + | DNA repair protein RadA Patl_1281 1539319 - 1540386 + | hypothetical protein Patl_1282 1540394 - 1540954 + | hypothetical protein TERM 1516 1541254 - 1541244 - g 76 -2.4 -5.42862 | opp_overlap 1541244 1541244 AGACTCTGAAAAAAA GCGC TTT GCGA CTTATACCCGGGACG TERM 1517 1542884 - 1542903 + G 70 -10 -3.08173 | TGCGCACTATTATCA CCTTAGGC AAAA GCCTAGGG TTAAGTACGGTTGCT Patl_1283 1540954 - 1543065 + | diguanylate cyclase/phosphodiesterase TERM 1518 1544123 - 1544107 - T 71 -9.5 -2.85056 | overlap 1544106 ATGGCTAATGTAAAG TGGGTAA TTG TTACCCA ACTAAGAGATAAAAT TERM 1519 1544242 - 1544264 + T 83 -12 -3.19192 | opp_overlap 1544230 1544242 ATAGCTTACAAAAAA GCCGACCAGT ATA AATGGTCGGC TTCGATTAAGTGGGG TERM 1520 1544264 - 1544242 - T 100 -12 -5.26918 | opp_overlap 1544242, overlap 1544230 ATAGCTTACAAAAAA GCCGACCAGT ATA AATGGTCGGC TTCGATTAAGTGGGG TERM 1521 1544319 - 1544332 + T 73 -6.7 -4.25848 | overlap 1544309 GCTTTGCTCGTTACG CGCTT TTCT AAGCG TTTTCCTAAACACTT Patl_1284 1547061 - 1544338 - | aconitate hydratase 1 TERM 1522 1547123 - 1547171 + r 95 -13.2 -3.45118 | gap 1, overlap 1547130 ATAGTTTTATATCTT C-GAGAGTCAGCCCCAACGCACA AGCT TGTGCGTTGGGGCTGTTAGTCAG TTAATTATGCGCTGG TERM 1523 1547130 - 1547163 + r 100 -25.5 -3.23598 | overlap 1547123 TATATCTTCGAGAGT CAGCCCCAACGCACA AGCT TGTGCGTTGGGGCTG TTAGTCAGTTAATTA Patl_1285 1547937 - 1547176 - | hypothetical protein TERM 1524 1547702 - 1547732 + g 73 -2 -5.20216 | gap 1 ATCGATGGGCTGTCT TTCAC-TTGCTGT TTACTC AAAGCAACGTGAA TTTTTTCGTCATCTG Patl_1286 1548896 - 1548486 - | glutathione-dependent formaldehyde-activating, GFA Patl_1287 1550315 - 1549032 - | transporter Patl_1288 1551031 - 1550396 - | TetR family transcriptional regulator Patl_1289 1551391 - 1551792 + | hypothetical protein Patl_1290 1551977 - 1552903 + | ubiquinol oxidase, subunit II Patl_1291 1552906 - 1554900 + | cytochrome-c oxidase Patl_1292 1554897 - 1555541 + | cytochrome c oxidase, subunit III Patl_1293 1555541 - 1555858 + | cytochrome C oxidase subunit IV Patl_1294 1555872 - 1556762 + | protoheme IX farnesyltransferase Patl_1295 1560574 - 1556903 - | multi-sensor hybrid histidine kinase TERM 1525 1560672 - 1560702 + r 74 -6.1 -4.43909 | gap 1, opp_overlap 1560674, overlap 1560669 1560674 TTGTTGGTAAATAAA AACGCCGCTTA-GG TTTC CCATCAGCGGCGTG TTGTTTTATTGCGGT TERM 1526 1560674 - 1560700 + r 77 -8.7 -3.8165 | gap 1, opp_overlap 1560674, overlap 1560672 1560669 GTTGGTAAATAAAAA CGCCGCTTA-GG TTTC CCATCAGCGGCG TGTTGTTTTATTGCG TERM 1527 1560700 - 1560674 - R 93 -8.7 -5.27335 | gap 1, opp_overlap 1560672 1560669 1560674 GTTGGTAAATAAAAA CGCCGCTTA-GG TTTC CCATCAGCGGCG TGTTGTTTTATTGCG Patl_1296 1562416 - 1560749 - | putative ABC transporter ATP-binding protein TERM 1528 1562522 - 1562534 + H 78 -2.7 -5.42131 | CTTTGTGCTCGCAGC TAAAC AGA GTTTG TTTTTTATCTAATTG TERM 1529 1563835 - 1563823 - g 72 -9.1 -3.57561 | opp_overlap 1563821 GGTTAACCCGCGAAA TGCCG GGG CGGCA GATATCTCGTTTACC Patl_1297 1562690 - 1563994 + | peptidase M20 TERM 1530 1564429 - 1564416 - g 80 -6.7 -4.81814 | ACTAGCACAAGAAAA GCAGT TATT ACTGC AAGAAGGGCTGTGGA TERM 1531 1564730 - 1564746 + G 80 -10.1 -3.90588 | ATATGCGCTATCCGT CTGGGCG CTG CGCTCAG TTTACTTGCACGATC Patl_1298 1564018 - 1565067 + | oxidoreductase-like TERM 1532 1565075 - 1565101 + F 75 -8 -4.00411 | GTATGTAGCACGACT GGCTCACCAC CTAAGCC GTGGTGATCC TTCTTTACACTTTTA Patl_1299 1565337 - 1566593 + | serine hydroxymethyltransferase TERM 1533 1566631 - 1566648 + F 100 -11.3 -5.71712 | opp_overlap 1566631, overlap 1566624 TAAACAAGCCAAAAA CGCACCT TTTT AGGTGCG TTTTTTTGTATAAAA TERM 1534 1566648 - 1566631 - f 95 -11.3 -4.8384 | opp_overlap 1566624 1566631 TAAACAAGCCAAAAA CGCACCT TTTT AGGTGCG TTTTTTTGTATAAAA TERM 1535 1566798 - 1566823 + F 71 -9.9 -2.89569 | overlap 1566796 1566792 1566800 CCTACGCACTCTATG TATATTCGCTG CGTT TAGCGAATATA TCATTGGTTTCAAAG Patl_1300 1566972 - 1567613 + | hypothetical protein Patl_1301 1569094 - 1567796 - | hypothetical protein TERM 1536 1568451 - 1568426 - G 72 -10.5 -2.77962 | opp_overlap 1568426, overlap 1568425 TTTTACAGCGGAAAT TTGCTGCTCTT GGGG AAGCGCAGCAA TCATGTCATCTAAAA TERM 1537 1568426 - 1568451 + g 71 -10.5 -2.68434 | opp_overlap 1568426 1568425 TTTTACAGCGGAAAT TTGCTGCTCTT GGGG AAGCGCAGCAA TCATGTCATCTAAAA Patl_1302 1569600 - 1569091 - | hypothetical protein Patl_1303 1572894 - 1569604 - | sporulation related TERM 1538 1570346 - 1570330 - G 71 -7.9 -3.99324 | opp_overlap 1570341 GGGGAGTACTACAAA GCCGCCT TTG AGGGGGC TACTAAATTCGAAGC TERM 1539 1571243 - 1571224 - G 81 -5 -5.09895 | opp_overlap 1571237, overlap 1571237 TAGTGAGCCAAAAAA GCGATCAT TAAA ATTATCGC TACGATTATAATTTA Patl_1304 1573666 - 1572908 - | hypothetical protein Patl_1305 1574430 - 1573666 - | hypothetical protein TERM 1540 1573726 - 1573743 + g 81 -3.5 -5.31059 | overlap 1573721 GTATACACCGGTCTC TTGAAAG ACGA TTTTCAA TTTTTTGCTTAATGT TERM 1541 1574479 - 1574449 - R 100 -4.8 -6.09133 | overlap 1574450 TACCTCAAAAAAAAA CCGTTGCCAT TTTTTTGTCTT ATGGCAACGA GAAGCAAGAAGTAAA TERM 1542 1574478 - 1574450 - R 71 -6.1 -4.23853 | overlap 1574449 ACCTCAAAAAAAAAC CGTTGCCAT TTTTTTGTCTT ATGGCAACG AGAAGCAAGAAGTAA Patl_1306 1575158 - 1574517 - | hypothetical protein Patl_1307 1575876 - 1575169 - | hypothetical protein Patl_1308 1577585 - 1576809 - | hypothetical protein TERM 1543 1576926 - 1576937 + g 74 -7.2 -4.19817 | opp_overlap 1576914, overlap 1576922 GAAGCTCTGCGCCGA GCCG ACCA CGGC TTTTGAATCAATACC TERM 1544 1577608 - 1577619 + r 70 -5.8 -4.41633 | overlap 1577605 TCCTAGTAGGCGTTA CGGT ATAA ACCG TTATTTTTCAGCATG Patl_1309 1578191 - 1577595 - | hypothetical protein Patl_1310 1578376 - 1578825 + | transcriptional regulator NrdR TERM 1545 1578932 - 1578915 - g 74 -5.5 -4.65895 | overlap 1578916 CGCTTGACGCAAAAA TGATGGC TTTG GCCATCC GCTTGGCTGAAAAAG TERM 1546 1578931 - 1578916 - g 70 -9 -3.39216 | overlap 1578915 GCTTGACGCAAAAAT GATGGC TTTG GCCATC CGCTTGGCTGAAAAA TERM 1547 1579598 - 1579617 + G 71 -10.7 -2.69647 | overlap 1579595 CGAGTTTTGCTCGAT GGGCGCA ACCAGA TGCGCCC TGATCTGCATTTATT Patl_1311 1578884 - 1580002 + | riboflavin biosynthesis protein RibD Patl_1312 1580146 - 1580811 + | riboflavin synthase subunit alpha Patl_1313 1580907 - 1582004 + | GTP cyclohydrolase II TERM 1548 1582028 - 1582061 + F 95 -12 -4.63542 | gap 1, opp_overlap 1582036 1582037, overlap 1582037 AGTTAATTACAAACG CTAAAAAAGCGCCTG CTTGT CAGGCG-TTTTTTAG TTTTTACACATTATA TERM 1549 1582054 - 1582036 - f 81 -5.9 -5.1361 | opp_overlap 1582028 1582037, overlap 1582037 ACAAACGCTAAAAAA GCGCCTG CTTGT CAGGCGT TTTTTAGTTTTTACA TERM 1550 1582053 - 1582037 - f 79 -9.4 -3.6654 | opp_overlap 1582037 1582028, overlap 1582036 CAAACGCTAAAAAAG CGCCTG CTTGT CAGGCG TTTTTTAGTTTTTAC TERM 1551 1582037 - 1582053 + F 100 -9.4 -5.54079 | opp_overlap 1582036 1582037, overlap 1582028 CAAACGCTAAAAAAG CGCCTG CTTGT CAGGCG TTTTTTAGTTTTTAC TERM 1552 1582203 - 1582227 + F 72 -3.6 -5.03314 | gap 1 CTGTTTGGGATCATA TGGTGC-TGTG CTAT CATACGCGCCA TTTTTTACAGATAAG Patl_1314 1582254 - 1582730 + | riboflavin synthase Patl_1315 1582731 - 1583153 + | NusB antitermination factor TERM 1553 1583345 - 1583380 + G 72 -2.7 -5.08824 | gap 2, overlap 1583348 TGCCGGTCAAGCCCT TGC-CACCAC-GACTGA TACC TTAGTGAGTGGTGTGCA TTTTTTGCCTGACGC TERM 1554 1583525 - 1583547 + G 71 -10 -3.22448 | opp_overlap 1583523 1583524, overlap 1583523 GCAGTGGCTTAAAGC GTTCTCTGAA GGC TTTAGAGAAC TTACTGAGTATTACT Patl_1316 1583226 - 1584236 + | thiamine-monophosphate kinase TERM 1555 1584539 - 1584564 + G 74 -3.3 -4.95302 | gap 1 ATGATTGCCGTACCG CTGAGTTGGCAA ACA TTGCTG-CTCGG TTTTGTTCTGTTTCG Patl_1317 1584236 - 1584724 + | phosphatidylglycerophosphatase Patl_1318 1584827 - 1585270 + | hypothetical protein Patl_1319 1587220 - 1585355 - | deoxyxylulose-5-phosphate synthase Patl_1320 1588156 - 1587266 - | polyprenyl synthetase Patl_1321 1588407 - 1588156 - | exodeoxyribonuclease VII, small subunit TERM 1556 1588659 - 1588670 + H 73 -5.8 -4.56597 | CTAAATGCACCTCCT GCGA ATTT TCGC TTTTTAAAGCAGGCG Patl_1322 1588745 - 1589509 + | flagellar motor protein PomA TERM 1557 1589901 - 1589885 - g 74 -3.5 -5.06414 | overlap 1589886 CGTGGTGAACAAAAA GGCGGGG CTG CCCAGCA AACGGCGAGTGAACA motB 1589513 - 1590430 + | flagellar motor protein MotB TERM 1558 1590526 - 1590483 - T 90 -11.2 -3.89524 | opp_overlap 1590489 1590497, overlap 1590489 1590497 AGCTTAGTCTATAAA TTCAAATCTAAAAAGCGGCA CATA TGCCGCTTTTTAGATTTCCT CATTTCTGTGTACTA TERM 1559 1590520 - 1590489 - T 100 -19 -3.89215 | opp_overlap 1590489 1590497, overlap 1590483 1590497 GTCTATAAATTCAAA TCTAAAAAGCGGCA CATA TGCCGCTTTTTAGA TTTCCTCATTTCTGT TERM 1560 1590489 - 1590520 + T 100 -19 -3.918 | opp_overlap 1590483 1590489 1590497, overlap 1590497 GTCTATAAATTCAAA TCTAAAAAGCGGCA CATA TGCCGCTTTTTAGA TTTCCTCATTTCTGT TERM 1561 1590497 - 1590512 + T 93 -10.4 -4.82855 | opp_overlap 1590489 1590483 1590497, overlap 1590489 ATTCAAATCTAAAAA GCGGCA CATA TGCCGC TTTTTAGATTTCCTC TERM 1562 1590512 - 1590497 - T 93 -10.4 -4.81851 | opp_overlap 1590497 1590489, overlap 1590489 1590483 ATTCAAATCTAAAAA GCGGCA CATA TGCCGC TTTTTAGATTTCCTC Patl_1324 1591101 - 1590544 - | putative lipoprotein Patl_1325 1591634 - 1591110 - | hypothetical protein Patl_1326 1592891 - 1591638 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 1563 1591872 - 1591883 + g 72 -3 -5.09173 | CAGGTCGCGGATCAT CATA TCGG TATG TTTTTTCAGATGTTG Patl_1327 1593621 - 1592893 - | hypothetical protein TERM 1564 1593599 - 1593579 - G 73 -11.1 -2.57132 | opp_overlap 1593578, overlap 1593578 GCTTTTTGGGATAAT GCCGGGCAT GAA ACACCCGGC CCTTGTAAATAGCGC Patl_1328 1594892 - 1593621 - | hypothetical protein TERM 1565 1593955 - 1593968 + g 74 -8.1 -3.84451 | ATGGCGTAATTCCAA CTGGC CCAT GCCAG TTTACGTTTGGGCAA TERM 1566 1594464 - 1594450 - G 70 -2.1 -5.00616 | TGTTCCGTCAAAAAA CCAAA CAGGC TCTGG TCAGCGGAGATGCCA TERM 1567 1594805 - 1594821 + g 79 -2.9 -5.33405 | opp_overlap 1594806, overlap 1594806 AATCGTTGGCTTCAA ACACGGT GAT ATCGTGA TTTTTATTTAATAAG Patl_1329 1595625 - 1594909 - | short-chain dehydrogenase/reductase SDR Patl_1330 1596044 - 1595622 - | hypothetical protein TERM 1568 1596093 - 1596105 + H 71 -6.2 -4.20084 | opp_overlap 1596093 GCTATATTATAGTAA CGCG ATAGA CGCG TTTTAGATCACTCGT Patl_1331 1596207 - 1596773 + | peptidase S16, lon-like Patl_1332 1596829 - 1597443 + | RNA polymerase sigma factor Patl_1333 1597436 - 1598107 + | anti-ECFsigma factor, ChrR TERM 1569 1598171 - 1598133 - T 86 -11.9 -3.42256 | opp_overlap 1598145, overlap 1598135 1598138 1598145 ATTTACCCAATAACA GACAATAAAAAACGCGC TCATG GCGCGTTTTTTTTTGTG AAATTTACCGGATTG TERM 1570 1598169 - 1598135 - T 100 -14.5 -3.27902 | opp_overlap 1598145, overlap 1598133 1598138 1598145 TTACCCAATAACAGA CAATAAAAAACGCGC TCATG GCGCGTTTTTTTTTG TGAAATTTACCGGAT TERM 1571 1598166 - 1598138 - T 80 -10.4 -3.76835 | opp_overlap 1598145, overlap 1598135 1598133 1598145 CCCAATAACAGACAA TAAAAAACGCGC TCATG GCGCGTTTTTTT TTGTGAAATTTACCG TERM 1572 1598145 - 1598159 + T 100 -9.2 -6.22802 | opp_overlap 1598145 1598138 1598135 1598133 ACAGACAATAAAAAA CGCGCT CAT GGCGCG TTTTTTTTTGTGAAA TERM 1573 1598159 - 1598145 - T 100 -8.5 -5.62045 | opp_overlap 1598145, overlap 1598138 1598135 1598133 ACAGACAATAAAAAA CGCGC TCATG GCGCG TTTTTTTTTGTGAAA Patl_1334 1598954 - 1598187 - | putative lipoprotein TERM 1574 1598555 - 1598571 + g 76 -5.1 -4.87786 | overlap 1598538 AGCGGTCTATACCGA CCAATTC TTG GAATAGG TTTTTATCGGATTCC TERM 1575 1599446 - 1599430 - g 72 -5.1 -4.57482 | opp_overlap 1599430 1599431, overlap 1599431 TTAGTCATAAACAAA CCAACCA ATT TGGTTGT TCATCCGGGGGCGGG Patl_1335 1599127 - 1600110 + | RluA family pseudouridine synthase TERM 1576 1600146 - 1600169 + G 87 -11 -3.85698 | opp_overlap 1600161 GATTATCCCCCAGTG GCCCGCAC CACATAAT GTGCGGGC TTTCTCAACGACGCG Patl_1336 1600117 - 1600851 + | hypothetical protein TERM 1577 1601269 - 1601247 - g 72 -9.2 -3.53811 | GGTAGTGCTGTTAAA TTTGAGCGAC AAA ATCGCCCAAA AACGTAAAGATAAAT Patl_1337 1600972 - 1603548 + | ATPase AAA-2 TERM 1578 1603618 - 1603589 - T 86 -7.9 -4.9725 | opp_overlap 1603595, overlap 1603590 1603595 ATTTTCATATAAAAA CTAAAACGGCTAC CTAG GTAGCCGTTTTTC ATGTTTAAAACTCAA TERM 1579 1603617 - 1603590 - T 88 -11.4 -3.57627 | opp_overlap 1603595, overlap 1603589 1603595 TTTTCATATAAAAAC TAAAACGGCTAC CTAG GTAGCCGTTTTT CATGTTTAAAACTCA TERM 1580 1603612 - 1603595 - T 95 -11.3 -4.84033 | opp_overlap 1603595, overlap 1603590 1603589 ATATAAAAACTAAAA CGGCTAC CTAG GTAGCCG TTTTTCATGTTTAAA TERM 1581 1603595 - 1603612 + T 95 -11.3 -4.93696 | opp_overlap 1603595 1603590 1603589 ATATAAAAACTAAAA CGGCTAC CTAG GTAGCCG TTTTTCATGTTTAAA Patl_1338 1606452 - 1603657 - | tetratricopeptide TPR_2 TERM 1582 1603688 - 1603703 + g 73 -4 -4.78572 | overlap 1603679 AACGCTTGAGCATCT CGTTTT TCAG GAAACG TTTTATTACTTGCCA TERM 1583 1605008 - 1605028 + g 71 -7 -4.15833 | overlap 1604986 ATGTGCAGATCTGCA TGTAGATT TTTGT AATCTACA TTTTCGGGTGCTAAT TERM 1584 1605513 - 1605543 + g 73 -4 -4.88795 | opp_overlap 1605523, overlap 1605516 1605520 TATAAGCGGTTATGC CAGCAACTAAGCTG AGC CAGCTTGTTTGTTC TTTATTTTCTTCGGT TERM 1585 1605516 - 1605540 + g 79 -7.9 -4.51933 | opp_overlap 1605523, overlap 1605513 1605520 AAGCGGTTATGCCAG CAACTAAGCTG AGC CAGCTTGTTTG TTCTTTATTTTCTTC TERM 1586 1605520 - 1605536 + g 82 -7.3 -4.73617 | opp_overlap 1605523, overlap 1605516 1605513 GGTTATGCCAGCAAC TAAGCTG AGC CAGCTTG TTTGTTCTTTATTTT TERM 1587 1605596 - 1605611 + g 86 -4 -5.4833 | gap 1, overlap 1605599 AGTTGAGCGAGTAGT GCATCAG CCT CTGA-GC TTTTTTCTTGCATCG TERM 1588 1606588 - 1606574 - R 100 -10 -6.15259 | opp_overlap 1606574 CAAGGCAAAAAAAAA CCTCAC AAG GTGAGG TTTTCAAAACGTTAA TERM 1589 1606574 - 1606588 + r 86 -10 -4.09739 | opp_overlap 1606574 CAAGGCAAAAAAAAA CCTCAC AAG GTGAGG TTTTCAAAACGTTAA Patl_1339 1607374 - 1606610 - | hypothetical protein TERM 1590 1608311 - 1608328 + G 77 -7 -4.42206 | opp_overlap 1608311 1608310, overlap 1608318 TTCAAAGAAGTAAAC TGGCAC GGTAAA GTGCCA TTTGTTGCTTTACTT Patl_1340 1607753 - 1608577 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1591 1611374 - 1611414 + T 100 -12.1 -5.02074 | opp_overlap 1611368 1611373 AGTAGAAAAGATTAG CCTTAATCAATGTGTACTG ATT CAGTATTTATTGATTAGGG TTTTTTAAACCCTAC TERM 1592 1612114 - 1612102 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 1593 1612909 - 1612891 - T 79 -10.3 -3.54743 | overlap 1612904 CATGAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 1594 1613412 - 1613401 - T 72 -4.4 -4.7254 | overlap 1613403 ACTGTTTATTAAAAA CACA GCAC TGTG CTAAATCGAAAGATG TERM 1595 1614519 - 1614544 + T 71 -6.9 -4.0371 | opp_overlap 1614519 1614522, overlap 1614522 TGAGGCTTAACCATA CAACGCCCAAA TGAC TTTGGATGTTG TTTGTATGACAAGTA TERM 1596 1614812 - 1614830 + T 93 -8.1 -5.42514 | opp_overlap 1614812, overlap 1614805 CCCATTTAGAATGAA GCCACCT ATATC GGGTGGC TTTTTTCGTTTCTGC TERM 1597 1614975 - 1614994 + T 83 -9.2 -4.09685 | opp_overlap 1614966 1614967 TTCAAACGGCTGGAG CGGTGCTC CAGA GAGCCCCG TTTTCACCCATCAAG TERM 1598 1615076 - 1615093 + T 80 -11.3 -2.75064 | overlap 1615073 1615078 GTGTTGCGCACCAGC CACGCCA TCCA TGGCGTG TCGTTCAGTCGGGCA TERM 1599 1615198 - 1615219 + T 93 -10.1 -5.14477 | opp_overlap 1615198 TCCCATTTAGAAAAA GGGCTATCC GTAA GGTTAGCCC TTTTTTGCATGTGTA TERM 1600 1615219 - 1615198 - T 93 -10.1 -4.87665 | opp_overlap 1615198 TCCCATTTAGAAAAA GGGCTATCC GTAA GGTTAGCCC TTTTTTGCATGTGTA TERM 1601 1615545 - 1615508 - T 100 -15.8 -2.79501 | gap 1, opp_overlap 1615508 1615514, overlap 1615514 CAGACGCCCATTACA CG-AAAAGCCCTGACCA AAAAA CGGTCAGGGCTTTTTCG TATATGCGCTTCGCG TERM 1602 1615508 - 1615545 + T 95 -15.1 -2.91681 | gap 1, opp_overlap 1615508 1615514, overlap 1615514 CAGACGCCCATTACA CG-AAAAGCCCTGACC AAAAAAC GGTCAGGGCTTTTTCG TATATGCGCTTCGCG TERM 1603 1615538 - 1615514 - T 100 -13.6 -4.371 | opp_overlap 1615508 1615514, overlap 1615508 CCCATTACACGAAAA GCCCTGACCA AAAAA CGGTCAGGGC TTTTTCGTATATGCG TERM 1604 1615514 - 1615538 + T 100 -12.9 -4.84527 | opp_overlap 1615514 1615508, overlap 1615508 CCCATTACACGAAAA GCCCTGACC AAAAAAC GGTCAGGGC TTTTTCGTATATGCG Patl_1341 1617835 - 1615679 - | protein of unknown function DUF699, ATPase putative TERM 1605 1618200 - 1618183 - g 85 -6.3 -5.24515 | gap 1, overlap 1618186 AAGAAACAAAGAAAA CGATCTGC TTA GCAGA-CG ACATTGTATTTGTTC Patl_1342 1617903 - 1618310 + | thioesterase superfamily protein Patl_1343 1618310 - 1619215 + | hypothetical protein Patl_1344 1619481 - 1621544 + | TonB-dependent receptor Patl_1345 1621560 - 1621817 + | hypothetical protein TERM 1606 1621901 - 1621926 + G 79 -10.5 -3.60525 | gap 1, opp_overlap 1621901 1621916 ACGGCTTGGTTAGAA GCAACGGCG-GT AAT ACTCGCTGTTGC TTATGTGTGGCTAGC TERM 1607 1622147 - 1622137 - g 71 -6.8 -4.18018 | opp_overlap 1622136 1622146 CTGGTCTATTCAAAA GCAC CTG GTGC GATTAGTGTTATTAA Patl_1346 1621817 - 1622464 + | nicotinamide mononucleotide transporter PnuC Patl_1347 1622442 - 1623281 + | aminoglycoside phosphotransferase Patl_1348 1623851 - 1624396 + | hypothetical protein Patl_1349 1624389 - 1624835 + | ribosomal-protein-alanine acetyltransferase TERM 1608 1624878 - 1624859 - T 81 -12.2 -2.61106 | overlap 1624846 1624855 1624863 GACATTGATAATCGA TGAAGCCC TTGC GGGCTTCA CATCGAAAACATTAT Patl_1350 1625144 - 1624890 - | XRE family transcriptional regulator TERM 1609 1625365 - 1625339 - R 90 -12.4 -3.53563 | opp_overlap 1625340 1625344, overlap 1625340 ACACGCGTGTGGAAA GTTAAGCCTCAC AGA GTGAGGCTTAAT CTACTTGATAAACTG TERM 1610 1625340 - 1625364 + r 100 -15.9 -2.93901 | opp_overlap 1625339 1625340, overlap 1625344 CACGCGTGTGGAAAG TTAAGCCTCAC AGA GTGAGGCTTAA TCTACTTGATAAACT TERM 1611 1625364 - 1625340 - R 100 -15.9 -2.71924 | opp_overlap 1625340 1625344, overlap 1625339 CACGCGTGTGGAAAG TTAAGCCTCAC AGA GTGAGGCTTAA TCTACTTGATAAACT TERM 1612 1625344 - 1625360 + r 87 -12.3 -3.33361 | opp_overlap 1625340 1625339, overlap 1625340 CGTGTGGAAAGTTAA GCCTCAC AGA GTGAGGC TTAATCTACTTGATA Patl_1351 1626216 - 1625431 - | hypothetical protein Patl_1352 1627007 - 1626297 - | hypothetical protein TERM 1613 1626853 - 1626827 - G 82 -3 -5.53991 | opp_overlap 1626831, overlap 1626831 CACGTAGTAAAAAAA TAATTGTGATCA CAC CGAGCACATTTA TATCTTTGCGACAAA TERM 1614 1626971 - 1626956 - G 100 -10.4 -4.82901 | opp_overlap 1626954 CTGCGGCGATAAAAA GCCCTC CAAA GAGGGC CGTAATTAGTTTAGG Patl_1353 1627273 - 1627007 - | XRE family transcriptional regulator TERM 1615 1628110 - 1628100 - g 85 -6.8 -4.99947 | opp_overlap 1628100 1628107, overlap 1628101 1628103 TGCAATTAAAGAAAA GCAC AAG GTGC TTGATGCGCTAATTA Patl_1354 1627867 - 1628679 + | short-chain dehydrogenase/reductase SDR TERM 1616 1629023 - 1629047 + T 79 -11.5 -2.74012 | opp_overlap 1629024 1629027, overlap 1629027 AACAGGGGGGATACA AGAAGTACCTG AAA CAGGTACTTCC TAATTAGCGTGCTCG TERM 1617 1629046 - 1629024 - T 100 -15 -3.49102 | opp_overlap 1629023 1629027, overlap 1629027 ACAGGGGGGATACAA GAAGTACCTG AAA CAGGTACTTC CTAATTAGCGTGCTC TERM 1618 1629043 - 1629027 - T 86 -10.9 -3.88232 | opp_overlap 1629023 1629027, overlap 1629024 GGGGGGATACAAGAA GTACCTG AAA CAGGTAC TTCCTAATTAGCGTG TERM 1619 1629027 - 1629043 + T 80 -10.9 -3.27774 | opp_overlap 1629027 1629024, overlap 1629023 GGGGGGATACAAGAA GTACCTG AAA CAGGTAC TTCCTAATTAGCGTG Patl_1355 1629317 - 1629072 - | hypothetical protein Patl_1356 1630433 - 1629528 - | LysR family transcriptional regulator Patl_1357 1630549 - 1631529 + | zinc-binding alcohol dehydrogenase TERM 1620 1631551 - 1631567 + F 93 -12.3 -4.08692 | GTACATACTGCGTTA CTAGCGC GAT GCGCTAG TTTTGGGGCCAATTC TERM 1621 1631572 - 1631588 + F 100 -10.8 -5.7827 | CGATGCGCTAGTTTT GGGGCC AATTC GGCCCC TTTTTTATTTCTCTT prfC 1631882 - 1633468 + | peptide chain release factor 3 Patl_1359 1633544 - 1635280 + | arginyl-tRNA synthetase TERM 1622 1635312 - 1635331 + F 100 -13.6 -5.40464 | opp_overlap 1635306 1635312 GCATTAAAATGCAAA CACCCGCT TTTT AGCGGGTG TTTTTGTTTGTGGTG TERM 1623 1635331 - 1635312 - f 100 -13.6 -3.94846 | opp_overlap 1635312, overlap 1635306 GCATTAAAATGCAAA CACCCGCT TTTT AGCGGGTG TTTTTGTTTGTGGTG TERM 1624 1635661 - 1635679 + G 70 -2.5 -5.06414 | gap 1, opp_overlap 1635650 1635665, overlap 1635665 AAAGTTGCCTTAGAG CAAGTGGT AGAA ACCA-TTG TTTTTCTTGAGCAGG Patl_1360 1635520 - 1636566 + | peptide chain release factor 2 TERM 1625 1636652 - 1636639 - g 72 -6.7 -4.33487 | ACAAGATGAAAACAA GCTCA TAGC TGAGC GCCGGGCTAAACTTT lysS 1636610 - 1638163 + | lysyl-tRNA synthetase TERM 1626 1638169 - 1638154 - T 72 -9 -3.30243 | AGTCAGTGGCGACAA GGCTGA ATAA TCAGCC AATAAGTTCAGAATA TERM 1627 1638184 - 1638213 + T 87 -12.3 -3.35597 | opp_overlap 1638190, overlap 1638190 CAATAAGTTCAGAAT AAAAAAGAGCGCT TTTA AGCGCTCTTTTTG TCTTTGGGGACTGAA TERM 1628 1638207 - 1638190 - T 100 -11.3 -5.55769 | opp_overlap 1638184 1638190 GTTCAGAATAAAAAA GAGCGCT TTTA AGCGCTC TTTTTGTCTTTGGGG TERM 1629 1638190 - 1638207 + T 100 -11.3 -5.19879 | opp_overlap 1638190, overlap 1638184 GTTCAGAATAAAAAA GAGCGCT TTTA AGCGCTC TTTTTGTCTTTGGGG Patl_1362 1639203 - 1638319 - | 2-dehydropantoate 2-reductase Patl_1363 1639937 - 1639221 - | pseudouridine synthase Rlu family protein Patl_1364 1640493 - 1639930 - | Hpt protein TERM 1630 1640641 - 1640627 - g 86 -2.8 -5.75342 | TCGTGGTAAAAAAAA TCGTTA TAT TATCGA CATTTGCTGGCATTT TERM 1631 1641309 - 1641295 - g 72 -6.4 -4.22652 | opp_overlap 1641295 GTAGATGACCTAAAA GCGTTC TTC AAACGC TGGTATGGCCCTAAT TERM 1632 1642666 - 1642629 - g 75 -9.9 -3.50853 | gap 1, opp_overlap 1642615, overlap 1642630 GTTTGGCAAGGATAA CCGTGT-CAGCCTGCCAG ATT CTGGCACCCTGAACACGA TTCAAAATATTTCAC TERM 1633 1642665 - 1642630 - g 73 -11.2 -2.70298 | gap 1, opp_overlap 1642615, overlap 1642629 TTTGGCAAGGATAAC CGTGT-CAGCCTGCCAG ATT CTGGCACCCTGAACACG ATTCAAAATATTTCA Patl_1365 1640599 - 1643475 + | peptidase M16-like Patl_1366 1643567 - 1645168 + | glutamate--cysteine ligase TERM 1634 1645210 - 1645193 - f 72 -8.3 -3.57918 | opp_overlap 1645194, overlap 1645194 AGTTATATTAGATAA GCCCGGC TTAC GCCGGGT TTTTTTATGCCTGTT TERM 1635 1645209 - 1645194 - f 81 -11.8 -2.74269 | opp_overlap 1645194, overlap 1645193 GTTATATTAGATAAG CCCGGC TTAC GCCGGG TTTTTTTATGCCTGT TERM 1636 1645194 - 1645209 + F 100 -11.8 -5.65177 | opp_overlap 1645193 1645194 GTTATATTAGATAAG CCCGGC TTAC GCCGGG TTTTTTTATGCCTGT TERM 1637 1645281 - 1645262 - f 100 -10 -6.09133 | CAGTGCAAAAAAAAA GCCCAGCT AAGA AGCTGAGC TTAAAAATTTTAGGA TERM 1638 1645513 - 1645495 - f 100 -12.4 -5.9873 | TTAGGATAAAAAAAA GCCCAGCT AGA AGCCGGGC TAAATAGTTTAATAA TERM 1639 1645768 - 1645749 - f 100 -15 -5.75945 | ATCGGTCAAAAAAAA GCCCGGCT AAAG AGCCGGGC TAAAATAGTTTAATC TERM 1640 1646006 - 1645987 - f 100 -13.6 -5.78622 | opp_overlap 1645984 1645983 1645987 TCAGGTCAAAAAAAA GCCCAGCT AAAG AGCTGGGC TAAATTAGTTTAATC TERM 1641 1645987 - 1646006 + F 91 -13.6 -2.64134 | opp_overlap 1645987, overlap 1645984 1645983 TCAGGTCAAAAAAAA GCCCAGCT AAAG AGCTGGGC TAAATTAGTTTAATC TERM 1642 1646254 - 1646235 - f 100 -13.6 -5.76949 | opp_overlap 1646231 TATGGTTAAAAAAAA GCCCAGCT AAAG AGCTGGGC TAAATAGTTTATTCA TERM 1643 1646507 - 1646489 - f 100 -14.6 -5.78622 | TTAGGTCAAAAAAAA GCCCGACT AAA AGTCGGGC CAAATAGTTTACTCG TERM 1644 1646632 - 1646645 + F 79 -5.9 -4.93296 | ATAGTACTAATTTAG CGGCC TACG GGCTG TTTTTATCATCATAC TERM 1645 1646933 - 1646915 - f 100 -10.3 -5.83822 | CACAGGCAAAAAAAA GCCCAAC TAGAC GTTGGGC TAAAAATTTTTGGAA TERM 1646 1647290 - 1647272 - f 100 -10.3 -5.82316 | AGTAGGCAAAAAAAA GCCCAAC TAGAC GTTGGGC TAAAAATTTTTGGAA TERM 1647 1647669 - 1647654 - f 83 -3.2 -5.56112 | overlap 1647666 AGAAAAACGAAAAAA GGGC AAAAAAAA GCCC AACAAAATGTCGGGC TERM 1648 1647684 - 1647666 - f 100 -11 -5.82388 | overlap 1647654 AAAGGGCAAAAAAAA GCCCAACA AAA TGTCGGGC TAAAAATTTTTGGAA Patl_1367 1647909 - 1648565 + | putative lipoprotein TERM 1649 1649209 - 1649197 - f 74 -6.3 -4.36914 | TGGGTGTTGATAAAA TTGCT TAA AGCAA TGAAGGGGACGCTAT Patl_1368 1649245 - 1650792 + | AMP-dependent synthetase and ligase Patl_1369 1651415 - 1650789 - | TetR family transcriptional regulator TERM 1650 1650885 - 1650932 + g 72 -8.4 -3.79113 | gap 1, opp_overlap 1650879, overlap 1650915 1650923 TATTAATAAGCGTGC GATGCCGTGCATCGTGCCCCAGG TGA CCTGGG-CAAGACGAAGGGTATC TTCTTGTGGCGACAT TERM 1651 1650939 - 1650965 + g 73 -2.2 -5.243 | overlap 1650915 AAGGGTATCTTCTTG TGGCGACATTAG ACC CTGCTCTTGCCA TTTTTTGGTCATTTC TERM 1652 1651374 - 1651391 + g 75 -2.6 -5.11613 | opp_overlap 1651374 GTCGCCGTGATGATA GCTGCC TTTGGC GGAAGC TTTTTTAGATGATGT TERM 1653 1651436 - 1651477 + H 90 -12.5 -3.67296 | opp_overlap 1651435, overlap 1651439 TAATTTACCACACAT CTTGACAGCGTCAAAATAA GACT TTATCTTGACGTTGTCTAG TTTAACTGGCTGATG TERM 1654 1651439 - 1651474 + H 84 -12.8 -2.9462 | opp_overlap 1651435, overlap 1651436 TTTACCACACATCTT GACAGCGTCAAAATAA GACT TTATCTTGACGTTGTC TAGTTTAACTGGCTG Patl_1370 1651550 - 1652425 + | enoyl-CoA hydratase/isomerase TERM 1655 1653675 - 1653695 + G 74 -8.3 -3.99678 | overlap 1653678 AAAACCGCAGCTGAG CGAGGTCAT TCG GTGACCTTG TTTGATTCTGCCGAT TERM 1656 1654229 - 1654219 - g 71 -6.8 -4.07885 | opp_overlap 1654220 CAGGTCTGGGTAAAA CCAC GGG GTGG GCACATCGTGTTGGT Patl_1371 1652457 - 1654505 + | NADH:flavin oxidoreductase/NADH oxidase TERM 1657 1654543 - 1654571 + T 100 -14 -5.24531 | TGAGCAAACGTGACA TCCCCATTACTG ATTGC CGGTAATGGGGA TTTTTTATGGCAGCT Patl_1372 1655483 - 1654602 - | LysR family transcriptional regulator Patl_1373 1655631 - 1656608 + | aldo/keto reductase Patl_1374 1656696 - 1657046 + | hypothetical protein TERM 1658 1658392 - 1658382 - g 87 -6.8 -5.20534 | opp_overlap 1658380 1658382 AGCAACGAAGAAAAA CTGC AAC GCAG TATTTTATCTCATGC Patl_1375 1657116 - 1658897 + | alpha amylase, catalytic region TERM 1659 1658969 - 1658928 - T 89 -9.6 -4.30576 | gap 1, opp_overlap 1658922 1658966, overlap 1658929 1658930 TTTTTACCAGCAAAA GCCGCAGATGTTATTGCAT AAGCG ATGCATTAACCTCTGCG-C GTAAGCCTTTTTATA TERM 1660 1658969 - 1658929 - T 73 -9.8 -3.18024 | opp_overlap 1658922 1658966, overlap 1658928 1658930 TTTTACCAGCAAAAG CCGCAGATGTTATTGCAT AAGCG ATGCATTAACCTCTGCGC GTAAGCCTTTTTATA TERM 1661 1658968 - 1658930 - T 90 -13.3 -2.50493 | opp_overlap 1658922 1658966, overlap 1658928 1658929 TTTACCAGCAAAAGC CGCAGATGTTATTGCAT AAGCG ATGCATTAACCTCTGCG CGTAAGCCTTTTTAT Patl_1376 1660320 - 1658989 - | Na+/H+ antiporter NhaC Patl_1377 1660746 - 1662029 + | sodium/hydrogen exchanger TERM 1662 1662101 - 1662140 + F 100 -18.1 -4.33621 | opp_overlap 1662101, overlap 1662092 AAGTCATTAGACTAA CGTCTAGCTTACTCAGT TGATTT ACCGAGTAAGCTAGACG TTTATTCATTCCCTA TERM 1663 1662140 - 1662101 - f 100 -20.3 -3.30214 | opp_overlap 1662092 1662101 AAGTCATTAGACTAA CGTCTAGCTTACTCAGT TGATTT ACCGAGTAAGCTAGACG TTTATTCATTCCCTA Patl_1378 1662178 - 1662579 + | BLUF domain-containing protein TERM 1664 1662621 - 1662583 - T 79 -9 -3.83226 | opp_overlap 1662581 1662590, overlap 1662585 1662590 AAGCAGGTATAAGAA GATGTAACCTTGGTCAAA GCA TTTGACCAAGGTTTTATG CAATATTTTTTATTT TERM 1665 1662619 - 1662585 - T 88 -11.6 -3.49568 | opp_overlap 1662581 1662590, overlap 1662583 1662590 GCAGGTATAAGAAGA TGTAACCTTGGTCAAA GCA TTTGACCAAGGTTTTA TGCAATATTTTTTAT TERM 1666 1662590 - 1662614 + T 100 -15.9 -4.43221 | opp_overlap 1662585 1662583 1662590, overlap 1662581 TATAAGAAGATGTAA CCTTGGTCAAA GCA TTTGACCAAGG TTTTATGCAATATTT TERM 1667 1662614 - 1662590 - T 100 -15.9 -3.25494 | opp_overlap 1662590 1662581, overlap 1662585 1662583 TATAAGAAGATGTAA CCTTGGTCAAA GCA TTTGACCAAGG TTTTATGCAATATTT Patl_1379 1664499 - 1662631 - | putative alkaline phosphatase TERM 1668 1664186 - 1664155 - G 79 -8 -4.4648 | gap 1 ACTGGCATCAGAAAA CGGG-TTAGCCACAG CAG CGGTGGTTAAACCCG ATAAATCAATCACTT TERM 1669 1665647 - 1665634 - H 86 -8.1 -4.88736 | CAGTATTGATAAAAA CGAGC GGTA GCTCG GTAGAAAAACGCGCA TERM 1670 1665671 - 1665657 - H 75 -5.6 -4.83169 | opp_overlap 1665657 1665658, overlap 1665658 AGCTCGGTAGAAAAA CGCGCA AGT TGCGCC TTATTAAATTGTTCT TERM 1671 1665670 - 1665658 - H 74 -9.1 -3.49419 | opp_overlap 1665658 1665657, overlap 1665657 GCTCGGTAGAAAAAC GCGCA AGT TGCGC CTTATTAAATTGTTC Patl_1381 1666093 - 1666488 + | hypothetical protein TERM 1672 1666536 - 1666497 - f 100 -5.8 -5.9218 | gap 1, opp_overlap 1666498 1666502, overlap 1666498 CACATAACAAAAAAA TTCAAGCGGACATTGCC AAGAGCG GGCAACG-CCGCTTAAT TTGGTGTTATAAGCC TERM 1673 1666535 - 1666498 - f 83 -9.3 -4.12868 | gap 1, opp_overlap 1666498 1666502, overlap 1666497 ACATAACAAAAAAAT TCAAGCGGACATTGCC AAGAGCG GGCAACG-CCGCTTAA TTTGGTGTTATAAGC Patl_1382 1666567 - 1666980 + | hypothetical protein TERM 1674 1667668 - 1667687 + G 93 -6.6 -5.72053 | opp_overlap 1667668 CTGGTTTGCAACTCA GATAAATT TTTT AATTTATC TTTTTTGTTTAGTTG Patl_1383 1667471 - 1667896 + | hypothetical protein Patl_1384 1668978 - 1668337 - | transposase IS116/IS110/IS902 Patl_1385 1671065 - 1670082 - | hypothetical protein Patl_1386 1671349 - 1671687 + | XRE family transcriptional regulator Patl_1387 1672997 - 1671789 - | transposase, IS4 TERM 1675 1672607 - 1672591 - G 71 -9.5 -3.18023 | overlap 1672589 GGATTATGACTAACA GGTGAAT TGT ATTCACC GAATGAAAATACGCG Patl_1388 1673219 - 1673539 + | hypothetical protein Patl_1389 1674160 - 1673792 - | hypothetical protein Patl_1390 1674676 - 1674182 - | hypothetical protein Patl_1391 1674989 - 1674696 - | hypothetical protein Patl_1392 1676621 - 1675056 - | hypothetical protein Patl_1393 1677908 - 1676625 - | hypothetical protein TERM 1676 1677738 - 1677754 + g 78 -5.1 -5.02074 | TGGTTCAGATATATC TCGGC TGGAAAT GCCGA TTTTTTCACCACTGG Patl_1394 1679884 - 1677962 - | putative serine protein kinase, PrkA TERM 1677 1678123 - 1678134 + g 75 -3 -5.10933 | overlap 1678128 GTAATAGATCTTCAG TGTT GGAA AACA TTTTCTTTTCAATCA TERM 1678 1678383 - 1678403 + g 70 -9.8 -3.04263 | opp_overlap 1678382 1678375, overlap 1678400 1678401 GCATAAATGACATAT CGGTCAAA CAGAT TTTGACCG TATTCAGAATAGGAT TERM 1679 1680129 - 1680112 - R 100 -11.3 -5.43414 | opp_overlap 1680112 AGCAGATACAAAAAA GCCTCGA TTTA TCGAGGC TTTTAAATCATCTTC TERM 1680 1680112 - 1680129 + r 93 -11.3 -4.23723 | opp_overlap 1680112 AGCAGATACAAAAAA GCCTCGA TTTA TCGAGGC TTTTAAATCATCTTC Patl_1395 1680753 - 1680172 - | superoxide dismutase TERM 1681 1680356 - 1680368 + g 72 -4.8 -4.56597 | overlap 1680355 TTAACGATGTCTAGG CTGC CATCA GCAG TTTTTACAAGCCAAG Patl_1396 1681020 - 1681349 + | glutaredoxin-like protein TERM 1682 1681402 - 1681445 + T 81 -12 -2.76171 | opp_overlap 1681416, overlap 1681405 1681416 TTTAGAACAGTTAGT CATCCATAAAAAAAGAGTCC TGTA GGACTCTTTTTTTATTTGTG TCCTGTTCCCTGCGT TERM 1683 1681405 - 1681443 + T 72 -9.9 -2.92522 | gap 1, opp_overlap 1681416, overlap 1681402 1681416 AGAACAGTTAGTCAT C-CATAAAAAAAGAGTCC TGTA GGACTCTTTTTTTATTTG TGTCCTGTTCCCTGC TERM 1684 1681431 - 1681416 - T 100 -9 -5.64274 | opp_overlap 1681405 1681402 1681416 TCATCCATAAAAAAA GAGTCC TGTA GGACTC TTTTTTTATTTGTGT TERM 1685 1681416 - 1681431 + T 100 -9 -6.04953 | opp_overlap 1681416, overlap 1681405 1681402 TCATCCATAAAAAAA GAGTCC TGTA GGACTC TTTTTTTATTTGTGT Patl_1397 1681729 - 1681535 - | BFD-like (2Fe-2S)-binding region Patl_1398 1681996 - 1682601 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1686 1682664 - 1682691 + T 89 -5.6 -5.4251 | opp_overlap 1682664 TGAAGTGATAAAAAA GCCGCTGT GATCTTATGTGA ACAGCGGC TTTTTTGTGTCTGCG TERM 1687 1682691 - 1682664 - T 85 -5.6 -5.31456 | opp_overlap 1682664 TGAAGTGATAAAAAA GCCGCTGT GATCTTATGTGA ACAGCGGC TTTTTTGTGTCTGCG Patl_1399 1683351 - 1682716 - | ribonuclease T TERM 1688 1683014 - 1683034 + g 70 -5.3 -4.49756 | overlap 1683017 TGCGCCACCATTACT GAGCGCTGG CAG TCAGCGTCC TTTTGCTCTTTGCGA Patl_1400 1683561 - 1684424 + | OmpA/MotB TERM 1689 1684499 - 1684477 - T 100 -13.6 -5.17353 | opp_overlap 1684477 AGAGCCATCAAAAAA GCCGATTAAT ACA ATTAATCGGC TTTTTGCTATTGGCT TERM 1690 1684477 - 1684499 + T 100 -13.6 -4.88228 | opp_overlap 1684477 AGAGCCATCAAAAAA GCCGATTAAT ACA ATTAATCGGC TTTTTGCTATTGGCT glpQ 1685548 - 1684559 - | glycerophosphodiester phosphodiesterase Patl_1402 1685968 - 1685585 - | lactoylglutathione lyase Patl_1403 1686385 - 1686071 - | small multidrug resistance protein TERM 1691 1686438 - 1686451 + r 71 -6.7 -3.98282 | overlap 1686435 1686434 GAAAAGCGCGAGGGA TGAGG TCGT CCTCA TTTCGTTGATATCAC TERM 1692 1686751 - 1686705 - R 79 -6.7 -4.63486 | gap 1, opp_overlap 1686705 1686709 ACGGGGCGAAGAAAA GAAACACGAATAGTGGTAGTAC TTTT GC-CGTTCACTATTCGTGTTTC TTGTATCTCAATATC TERM 1693 1686705 - 1686751 + r 77 -9.7 -3.61239 | gap 1, opp_overlap 1686705, overlap 1686709 ACGGGGCGAAGAAAA GAAACACGAATAGTGG-TAGTA CTTT TGCCGTTCACTATTCGTGTTTC TTGTATCTCAATATC Patl_1404 1688181 - 1686808 - | cellulase TERM 1694 1688337 - 1688323 - R 74 -4.3 -4.87803 | opp_overlap 1688323, overlap 1688333 TACCGCCAAACAAAA GGTAA AATAA TTACC CTTTCAGGGTAAGGT TERM 1695 1688349 - 1688333 - R 90 -9.5 -4.31549 | opp_overlap 1688323, overlap 1688323 CAAAAGGTAAAATAA TTACCCT TTC AGGGTAA GGTTAGCGAAATTCG Patl_1405 1690048 - 1689023 - | zinc-binding alcohol dehydrogenase TERM 1696 1690378 - 1690396 + r 77 -10.3 -3.28924 | opp_overlap 1690378 GTTTCAGATAAAAAA GCCAGCA GAGAA TGCTGGC TTCTCGACGCCCATG TERM 1697 1690396 - 1690378 - R 100 -10.3 -5.36441 | opp_overlap 1690378 GTTTCAGATAAAAAA GCCAGCA GAGAA TGCTGGC TTCTCGACGCCCATG Patl_1406 1691222 - 1690452 - | short-chain dehydrogenase/reductase SDR TERM 1698 1691238 - 1691269 + r 78 -3 -5.35721 | opp_overlap 1691245, overlap 1691245 CTACGTTCCTTATCT TAGTAAAGCGCC AAGCATCA GGCGCTTCGTTA TTTTTGTTATTCTGT Patl_1407 1691638 - 1691387 - | hypothetical protein TERM 1699 1691864 - 1691882 + H 84 -2.4 -5.84432 | overlap 1691868 TCAAGTATTTTCAGT TAAGTGGT TAG ACCAGTTG TTTTTTTCTGTTATA TERM 1700 1692167 - 1692149 - g 70 -8.8 -3.39668 | opp_overlap 1692147 CTGTAAATTCGATAA TGGTGTGG TGA CCACGCCA ACTGGCTTTAAAGCG Patl_1408 1691940 - 1693760 + | acyl-CoA dehydrogenase-like TERM 1701 1693862 - 1693905 + T 79 -9.9 -3.66819 | gap 2, overlap 1693860 GCAGTAAAGAAAGGG CTAAGGCACTGAGTT--ATTG GAAT CAATTTGACTCAGTGCCTTGG TGTTTATGCTTTCGT Patl_1409 1694746 - 1694036 - | hypothetical protein TERM 1702 1694130 - 1694109 - G 71 -7.3 -4.05033 | TTTACTTGATACAAA GCTCCAGAA GCAT TTCCAGAGC CAACAAACGTAATAC Patl_1410 1695138 - 1694830 - | hypothetical protein Patl_1411 1695853 - 1695482 - | hypothetical protein TERM 1703 1695897 - 1695907 + r 79 -3.2 -5.4251 | GCCTATCAGGTGAGG TGGT TAA GCCA TTTTTTGTCTGTCAC Patl_1412 1696193 - 1695942 - | hypothetical protein Patl_1413 1696856 - 1696542 - | virulence gene repressor RsaL TERM 1704 1697141 - 1697153 + r 70 -3.5 -4.93365 | overlap 1697147 AGGTAGTCATCTCGA TATTT CTC AAATA TTTTTGATTCTACGA TERM 1705 1697284 - 1697295 + r 79 -5.8 -5.00616 | opp_overlap 1697283, overlap 1697281 ATGTGCTGCACACAC GGCA TCCA TGCC TTTTTTCAAACGAAA TERM 1706 1697828 - 1697816 - R 72 -9.1 -3.35962 | overlap 1697814 1697813 TTGATAGAAAAAGCA GCGAC TAA GTCGC CAAAAGTAACGGCTA TERM 1707 1698375 - 1698360 - R 71 -7.6 -3.90762 | overlap 1698358 1698365 1698367 GAGTCGTGAAAAAGA CAAAGC ATGT GCTTTG CACACTAATAATCCG TERM 1708 1698415 - 1698441 + r 78 -7.4 -4.36774 | opp_overlap 1698418 GTGTGTATTTGACAT GAATTAACATGG GTG TCTTGTTAATTC TTTATCTTGTTAATT Patl_1415 1699353 - 1698607 - | hypothetical protein Patl_1416 1700387 - 1699407 - | hypothetical protein TERM 1709 1700171 - 1700184 + g 70 -5.3 -4.53703 | CTTTACAAATTTGTG GAAAC TGAG GTTTC TTTTGCTGTTCTTTT TERM 1710 1700750 - 1700796 + H 100 -16.1 -2.90813 | gap 1, overlap 1700747 ATTTTCCATATTTTT CTTCGGCTTGT-CAGGTGTCCA GACA TGGACGTCTGGACAAGGCGAAG TGCTTTACAGGGATG TERM 1711 1701371 - 1701387 + G 77 -11.5 -3.28712 | opp_overlap 1701368 1701371 GTTGTCGACAAAGTA CGGCGTG AGC CGCGCCG TTATCCGAGAAGCGA TERM 1712 1701822 - 1701855 + G 70 -9.5 -2.96141 | opp_overlap 1701811 1701807, overlap 1701821 1701818 GCGATCTCGAATCGG GACGGCGAGTTAGCA GAGA TGCTGATGCGCCGCC ATATTTTATATTCGA Patl_1418 1701243 - 1701911 + | GntR family transcriptional regulator TERM 1713 1701887 - 1701927 + F 77 -10.5 -3.41602 | opp_overlap 1701891 1701894, overlap 1701892 1701894 1701895 AAATAATATTCAGCG CAAATTAGCGCCACAGC CGGTCTA GCTGTGGCGTCATTTTG TTGTCATCAAATAAC TERM 1714 1701892 - 1701922 + F 89 -9 -4.81212 | opp_overlap 1701891 1701894, overlap 1701887 1701894 1701895 ATATTCAGCGCAAAT TAGCGCCACAGC CGGTCTA GCTGTGGCGTCA TTTTGTTGTCATCAA TERM 1715 1701894 - 1701921 + F 74 -9.2 -3.48004 | gap 1, opp_overlap 1701894 1701891, overlap 1701892 1701887 1701895 ATTCAGCGCAAATTA G-CGCCACAGC CGGTCTA GCTGTGGCGTC ATTTTGTTGTCATCA TERM 1716 1701920 - 1701894 - f 75 -10.1 -2.92792 | opp_overlap 1701892 1701887 1701894 1701895, overlap 1701891 ATTCAGCGCAAATTA GCGCCACAGCC GGTCT AGCTGTGGCGT CATTTTGTTGTCATC TERM 1717 1701895 - 1701919 + F 93 -12.9 -3.30187 | opp_overlap 1701894 1701891, overlap 1701894 1701892 1701887 TTCAGCGCAAATTAG CGCCACAGC CGGTCTA GCTGTGGCG TCATTTTGTTGTCAT prpB 1702016 - 1702894 + | 2-methylisocitrate lyase TERM 1718 1703791 - 1703773 - g 86 -3 -5.64421 | overlap 1703774 AGCGTAAAGAAAAAA TCATGGGC TTT GGCCATGC GATTTACCGCGAGTC Patl_1420 1703010 - 1704134 + | 2-methylcitrate synthase/citrate synthase II TERM 1719 1704148 - 1704167 + F 70 -8.6 -3.37975 | AAGCGGGCGAGCAGG GCGAATGT GTAT GCATTCGC TTGTGCCTCATCGCT Patl_1421 1704267 - 1706873 + | aconitate hydratase TERM 1720 1707294 - 1707284 - g 76 -8.2 -4.09685 | opp_overlap 1707277 1707275 CCGTATTCCGCAAAA CGGC ATT GCCG AGGTGCGTATTTGGC TERM 1721 1707874 - 1707894 + G 77 -11.1 -3.15544 | TGCATCACGCCATGA TGGGCACGG CAG CCGTGGCCA TTGGTACAGCTGCAG Patl_1422 1706883 - 1708112 + | putative AcnD-accessory protein PrpF TERM 1722 1708244 - 1708219 - f 100 -17.7 -3.62418 | opp_overlap 1708219 ATAAGCGATTGGAAA GCGACCTTAGC CTTT GCTAAGGTCGC TTTTTTATATCAGTT TERM 1723 1708219 - 1708244 + F 100 -17.7 -5.38951 | opp_overlap 1708219 ATAAGCGATTGGAAA GCGACCTTAGC CTTT GCTAAGGTCGC TTTTTTATATCAGTT TERM 1724 1708917 - 1708900 - g 76 -8.5 -4.08216 | TTACCGCCCTCAAAA CGCTTTA CTGC TAAAGCG CTGCGGCCTATACCC Patl_1423 1708330 - 1709511 + | major facilitator transporter TERM 1725 1710167 - 1710144 - g 70 -9.6 -3.03151 | opp_overlap 1710149, overlap 1710143 TGGCGTAAAGCAAAT TGAAAGTGCC TTTG GGCGCTTTCA GCATCTTAACGAAAA Patl_1424 1709704 - 1710717 + | diguanylate cyclase TERM 1726 1711677 - 1711662 - g 76 -9 -3.69621 | ATTGACAACCTTAAA CGTGAC TACC GTCACG CAGCGAAATGCGCCA Patl_1425 1711212 - 1712306 + | NADH:flavin oxidoreductase/NADH oxidase Patl_1426 1712484 - 1713539 + | alcohol dehydrogenase GroES-like protein TERM 1727 1713597 - 1713615 + F 100 -13.2 -4.98531 | opp_overlap 1713597 AACATTACCTAGAAA CCCAAGCA CTG TGCTTGGG TTTTTCATTTACAGC TERM 1728 1713615 - 1713597 - f 100 -13.2 -3.94811 | opp_overlap 1713597 AACATTACCTAGAAA CCCAAGCA CTG TGCTTGGG TTTTTCATTTACAGC Patl_1427 1714223 - 1715626 + | ethanolamine ammonia lyase large subunit TERM 1729 1716496 - 1716513 + G 89 -9.1 -4.65895 | opp_overlap 1716496 1716495 GCGCTAAAAACCAAC GCTGTGC CTAA GCGCAGC TTTTTGACTAAGCCG Patl_1428 1715626 - 1716534 + | ethanolamine ammonia-lyase small subunit Patl_1429 1718393 - 1716663 - | hypothetical protein TERM 1730 1717879 - 1717858 - G 72 -5.1 -4.58395 | TCCAGTGTGTAAAAA CCGTCGAAA CTTT TCCCAACGG TATAGCCAAAGTCGT TERM 1731 1718093 - 1718106 + g 72 -5.9 -4.48823 | CAGCAGTATTGAAGT CGCCT GATC GGGCG TTTTCTAAGTTGGTT TERM 1732 1718567 - 1718557 - R 81 -5.4 -5.04601 | GCGATAAAGCAAAAA GCTT TCA AAGC GTATGATGCAGATGT TERM 1733 1718657 - 1718625 - R 91 -13.6 -2.74563 | gap 1 TTGATATGTGAATCA GCGCCATAGC-AAGG CAAT CCTTTACTATGGCGC GAACGCGGTAAACCA Patl_1430 1720185 - 1718674 - | putative lipoprotein TERM 1734 1720159 - 1720169 + g 77 -6.8 -4.45664 | opp_overlap 1720158 AGGGGAGCGAATTAT CGAC GAC GTCG TTTTGCTTAACTTCA TERM 1735 1720619 - 1720602 - R 79 -9.1 -3.94877 | overlap 1720616 ATGTGGTAAGAATAA GCGGCTC GAAC GAACCGC TAAATAACGGAATTA Patl_1431 1721882 - 1720632 - | lyase precursor-like TERM 1736 1721808 - 1721781 - G 100 -17.2 -3.33815 | opp_overlap 1721769 ATGGGCTTCAACCAA GTCTTTGCCAGA TGTA TCTGGCAAAGAC TGTGCAAACAGAGAC Patl_1432 1722735 - 1722055 - | short-chain dehydrogenase/reductase SDR TERM 1737 1722891 - 1722872 - H 73 -10 -2.75481 | GTGTAAGTGGAACTA CCCTGGTC TATC GACCAGGA ACCAATATAGAGATG Patl_1433 1723060 - 1724295 + | hypothetical protein TERM 1738 1724316 - 1724286 - T 93 -9.2 -5.252 | gap 1, opp_overlap 1724286 1724283 CATGCCCACAAAAAA GGCGCTGTAGAAT TTATTT ATTCTA-AGCGCC TAGTGTTGGTTTAAA Patl_1434 1725973 - 1724342 - | ferredoxin-dependent glutamate synthase TERM 1739 1724426 - 1724443 + g 91 -7.7 -5.1356 | GGCTTCTTTAAGTGC CTGAGCA AACT TGCTCGG TTTTTCTTCATCAAA TERM 1740 1725445 - 1725431 - G 71 -7 -4.07568 | CGTGTTGTGGTAAAA GCCGCC TAT GGCCGC GCCTTTATTAAGTGC Patl_1435 1726522 - 1726151 - | glyoxalase/bleomycin resistance protein/dioxygenase Patl_1436 1727601 - 1726714 - | LysR family transcriptional regulator TERM 1741 1727942 - 1727953 + G 70 -2.2 -4.98672 | gap 1 ATTGGTGTTATTGGG GCACG TCG CG-GC TTTTATGTTTTTAGG Patl_1437 1727829 - 1728155 + | small multidrug resistance protein Patl_1438 1728300 - 1729424 + | zinc-binding alcohol dehydrogenase TERM 1742 1729459 - 1729432 - f 77 -10.6 -2.85056 | opp_overlap 1729431 1729430 1729432, overlap 1729431 ACTTCTAAGCGAAAG CGACTGCTTGCT CTTG AGCGAGCAGTCA TGCATTTTGCGCTTT TERM 1743 1729432 - 1729459 + F 77 -10.6 -2.76693 | opp_overlap 1729432 1729431, overlap 1729431 1729430 ACTTCTAAGCGAAAG CGACTGCTTGCT CTTG AGCGAGCAGTCA TGCATTTTGCGCTTT TERM 1744 1730024 - 1729986 - g 73 -8 -4.03234 | opp_overlap 1729986, overlap 1729987 CCCGTGTCAGACAAA CGCGCCATTGCCGGCCAT TCA ATGGGCGGTCATGGGGCA TTGACTATCGCCATG Patl_1439 1729548 - 1730405 + | carboxylesterase TERM 1745 1730475 - 1730456 - T 70 -7.8 -3.7347 | overlap 1730448 TTCAATACTCAAGAA GGTGAGCG CTTG CGCTGACC TTACCCCTCACTCCG Patl_1440 1731457 - 1730483 - | LysR family transcriptional regulator Patl_1441 1731605 - 1732456 + | hypothetical protein Patl_1442 1732990 - 1732667 - | hypothetical protein Patl_1443 1733332 - 1735563 + | TonB-dependent siderophore receptor TERM 1746 1735575 - 1735611 + F 73 -8.8 -3.767 | opp_overlap 1735579, overlap 1735579 TTAATCCGAAATGTT TAAACATGCCAATCGA CCAGC TCGGTTGGCATGTTGC TTTGGTAAATAAGTA TERM 1747 1735579 - 1735607 + F 95 -14 -3.57418 | opp_overlap 1735579, overlap 1735575 TCCGAAATGTTTAAA CATGCCAATCGA CCAGC TCGGTTGGCATG TTGCTTTGGTAAATA TERM 1748 1735607 - 1735579 - f 89 -11.8 -3.63968 | opp_overlap 1735575 1735579 TCCGAAATGTTTAAA CATGCCAATCGA CCAGC TCGGTTGGCATG TTGCTTTGGTAAATA TERM 1749 1736504 - 1736492 - g 71 -3.3 -4.86001 | ACTATTGTACAAAAA GCGCA AAA TGCCC ATGATAATTGGGAAA Patl_1444 1735724 - 1736914 + | PepSY-associated TM helix Patl_1445 1738439 - 1737132 - | short chain fatty acid transporter TERM 1750 1738120 - 1738098 - G 76 -8.4 -4.11623 | TATGACTAAACCAAA CCCCCAATTG ATC CAACTGGCGG TGAGTGATACCAAGG Patl_1446 1738740 - 1739666 + | hypothetical protein Patl_1447 1741006 - 1740074 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Patl_1448 1741847 - 1741194 - | maleylacetoacetate isomerase Patl_1449 1742355 - 1744754 + | tetratricopeptide TPR_2 Patl_1450 1744842 - 1745189 + | hypothetical protein Patl_1451 1745869 - 1745240 - | lysine exporter protein LysE/YggA TERM 1751 1745726 - 1745714 - G 72 -5.5 -4.41512 | overlap 1745716 TGATAACAAAAAATA CACCA CGT TGGCG CTGGCCACACCCGTT TERM 1752 1746153 - 1746172 + H 77 -9.4 -3.57263 | opp_overlap 1746153 AGTAAAGTTCACAAA GTTTCAGT AATT ACTGAAAC TTTAGAAGTGAAAGT TERM 1753 1746172 - 1746153 - H 83 -9.4 -3.95621 | opp_overlap 1746153 AGTAAAGTTCACAAA GTTTCAGT AATT ACTGAAAC TTTAGAAGTGAAAGT Patl_1452 1746252 - 1747838 + | cytochrome bd ubiquinol oxidase, subunit I Patl_1453 1747835 - 1748974 + | cytochrome d ubiquinol oxidase, subunit II Patl_1454 1749016 - 1749198 + | cyd operon protein YbgT TERM 1754 1749211 - 1749237 + F 93 -10.1 -5.00616 | gap 1, opp_overlap 1749225, overlap 1749213 TAAAGCCCGTCCAGA CCGCGC-TCAGC AAAT GCTGTTGCGCGG TTTTTTAAAGCGCGA Patl_1455 1749224 - 1750975 + | ABC transporter related Patl_1456 1750968 - 1752842 + | ABC transporter related TERM 1755 1752920 - 1752934 + F 76 -7.2 -4.15788 | opp_overlap 1752920, overlap 1752933 GGATTTTGCTGAAGA GCTTTT CTA AAAAGC TTTGTTCAAGAGCTT Patl_1457 1753148 - 1753582 + | OsmC-like protein Patl_1458 1753742 - 1753960 + | hypothetical protein Patl_1459 1754089 - 1754475 + | putative glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein TERM 1756 1756150 - 1756136 - g 71 -7.2 -4.15044 | TTGGTGTTTAAGAAA TTTCTC AGT GAGAAA TCGATGCTGCTCAGC Patl_1460 1755296 - 1756450 + | metal dependent phosphohydrolase Patl_1461 1756894 - 1756496 - | hypothetical protein TERM 1757 1756789 - 1756769 - G 74 -3.9 -5.02074 | CGATTCTTGAAAAAA GCACACCGG ATC CAAATGTGC ATAATCAGCTACCTT Patl_1462 1757792 - 1757031 - | enoyl-CoA hydratase/isomerase Patl_1463 1758281 - 1757832 - | MarR family transcriptional regulator TERM 1758 1758195 - 1758206 + g 73 -2.2 -5.24129 | overlap 1758188 CGTGCTAACGTGCAG CTCG CTTT TGAG TTTTTTATCCGCGGC TERM 1759 1758242 - 1758230 - G 89 -9.1 -4.56597 | CCGCGGCTTTAAAAA GCGCA CCA TGCGC TAACTGCAGCAAGTG Patl_1464 1758500 - 1759486 + | hypothetical protein Patl_1465 1759667 - 1759972 + | hypothetical protein Patl_1466 1760716 - 1760258 - | hypothetical protein TERM 1760 1760668 - 1760658 - G 76 -4 -4.98672 | opp_overlap 1760658 GTCAAAAATATAAAA TTTG GGC CAAA TGTATCCGTTAAATA Patl_1467 1760764 - 1762218 + | phospholipase D/transphosphatidylase Patl_1468 1762277 - 1763050 + | hypothetical protein Patl_1469 1763249 - 1763680 + | hypothetical protein Patl_1470 1764156 - 1764362 + | hypothetical protein Patl_1471 1764364 - 1765140 + | methionine aminopeptidase, type I Patl_1472 1766283 - 1765588 - | zinc/iron permease TERM 1761 1766669 - 1766694 + r 75 -10.5 -3.14683 | opp_overlap 1766674, overlap 1766674 GCTCTGTAAAGGGTT ATCAATTGCCC GTTA GGGCAATTGAC TTAGTGCAGGACTAT TERM 1762 1766689 - 1766674 - R 70 -9 -3.17714 | opp_overlap 1766669 1766674 GTAAAGGGTTATCAA TTGCCC GTTA GGGCAA TTGACTTAGTGCAGG TERM 1763 1766674 - 1766689 + r 70 -9 -3.20723 | opp_overlap 1766674, overlap 1766669 GTAAAGGGTTATCAA TTGCCC GTTA GGGCAA TTGACTTAGTGCAGG Patl_1473 1768419 - 1766713 - | hypothetical protein TERM 1764 1768439 - 1768460 + r 93 -14.5 -2.52464 | opp_overlap 1768431 1768439 ATTACAACGAAAAAA TCCGAGCAC ACCT GTGCTCGGA TGAATTAAAGGGAAA TERM 1765 1768460 - 1768439 - R 100 -14.5 -5.33848 | opp_overlap 1768439, overlap 1768431 ATTACAACGAAAAAA TCCGAGCAC ACCT GTGCTCGGA TGAATTAAAGGGAAA Patl_1474 1770317 - 1768479 - | hypothetical protein TERM 1766 1770624 - 1770596 - R 88 -11.2 -3.48292 | gap 1, opp_overlap 1770594, overlap 1770594 ACGGAGTAGGAAATA GACGATAAA-GCC AAGC GGCGTTTATCGTC AGTGGTGTACTTGGT Patl_1475 1772658 - 1770721 - | FG-GAP TERM 1767 1772778 - 1772794 + r 79 -6.7 -4.58424 | overlap 1772774 TATTGATAATGTTTA TTGTAAA TTG TTTACAA TTTTATATCATACTC Patl_1476 1773733 - 1773350 - | hypothetical protein Patl_1477 1775093 - 1774569 - | endoribonuclease L-PSP Patl_1478 1776482 - 1775157 - | twin-arginine translocation pathway signal TERM 1768 1776750 - 1776732 - R 75 -3 -5.24449 | overlap 1776724 1776734 CAGAAAGCCAAAAAA CTGGTGAG AAG CTCAGCGG AGTAGATAGCTTATC TERM 1769 1776834 - 1776807 - R 76 -10.7 -2.59569 | overlap 1776806 TGTCTAAATTAATAT GCCCAGTAATC ATGAAA AATTACTGGGC CGCGCTTTATGACAC Patl_1479 1778637 - 1776910 - | 2-isopropylmalate synthase Patl_1480 1778794 - 1779255 + | AsnC family transcriptional regulator TERM 1770 1779538 - 1779561 + T 79 -9.6 -3.67864 | opp_overlap 1779538 CTCCCAAAATAAAAA GGCCTAAAAG TTCA CTTTCAGGCC TTTACACTTCACTTA TERM 1771 1779561 - 1779538 - T 100 -11.8 -5.45802 | opp_overlap 1779538 CTCCCAAAATAAAAA GGCCTAAAAG TTCA CTTTCAGGCC TTTACACTTCACTTA Patl_1481 1780790 - 1779642 - | iron-containing alcohol dehydrogenase TERM 1772 1780625 - 1780635 + g 72 -5.4 -4.5442 | opp_overlap 1780619, overlap 1780620 TATTAACATCTTTCT CTTG GAG CAAG TTTTGTACTTCAGCG Patl_1482 1782031 - 1781096 - | hypothetical protein Patl_1483 1782739 - 1782092 - | lysine exporter protein LysE/YggA TERM 1773 1782777 - 1782789 + r 72 -3.3 -5.03405 | opp_overlap 1782768 AAAGATTACGCGATA AACGC CTA GCGTA TTTTTATATCATATT Patl_1484 1783529 - 1782924 - | hypothetical protein Patl_1485 1784677 - 1783550 - | aminotransferase, class I and II TERM 1774 1784128 - 1784142 + g 71 -7 -4.07568 | opp_overlap 1784125 1784123 1784127 TCTCATCAATGATAC GCCACG CAC CGCGGC TTTTAGCGAACGCGC TERM 1775 1785045 - 1785019 - H 77 -6 -4.61873 | TGTGACAAATTAAAA TGCAAATGATAA CGA TTACTATTTGCA GTAGATATTCACGTG TERM 1776 1786352 - 1786374 + G 71 -3.4 -4.74917 | overlap 1786364 CAGGGCAAAGCTATC GCGTTCCT ACGTTAA AAGAACGC TTTTATGTATTTGAT TERM 1777 1786567 - 1786557 - g 90 -6.8 -5.30616 | opp_overlap 1786565, overlap 1786558 TGACTCAAACAAAAA CGCT CAC AGCG CCTACCCGCGCTTGT Patl_1486 1785088 - 1787121 + | TonB-dependent receptor, plug Patl_1487 1787150 - 1788274 + | hypothetical protein TERM 1778 1788382 - 1788349 - f 100 -16.8 -3.63515 | GTTTATTTTCAACAA GTGCGGTTTGCGGC GGTATT GGCGCAAACCGCAC TTCAGCCGCACACAA Patl_1488 1788434 - 1789366 + | periplasmic binding protein TERM 1779 1789628 - 1789642 + G 75 -10 -3.53174 | overlap 1789627 ATGTCTTTTCTGAGC TGCGTG TAC CACGCA TGTTTATGGCCATGT TERM 1780 1790066 - 1790086 + G 70 -9.1 -3.35774 | overlap 1790056 CTAAAGTGCTGTTTG TCGGAATAT TAA GTATTCCGA TTATCGCGCTTTATA TERM 1781 1790426 - 1790436 + G 72 -3.2 -4.97402 | TGACCTCAGCTGTGG GAGC GCC GTTC TTTTTATACCTTTTA Patl_1489 1789363 - 1790484 + | transport system permease protein TERM 1782 1791168 - 1791189 + G 74 -5.9 -4.63932 | GATATTAACTTGGTT TTACCTTAC GCCA GTGAGGTGA TTTTGTTAGCAAATG Patl_1490 1790490 - 1791326 + | ABC transporter related Patl_1491 1791360 - 1792094 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Patl_1492 1792799 - 1792239 - | glycoside hydrolase family protein TERM 1783 1793124 - 1793134 + G 75 -3.2 -5.11613 | overlap 1793120 TACGAGTTTTTGCAT CGTA TTA TGCG TTTTTTGCCTAATAT Patl_1493 1793100 - 1793489 + | Ion transport 2 Patl_1494 1793787 - 1794311 + | hypothetical protein Patl_1495 1795512 - 1794544 - | beta-lactamase-like Patl_1496 1796423 - 1795698 - | abortive infection protein Patl_1497 1796522 - 1797439 + | LysR family transcriptional regulator TERM 1784 1798155 - 1798145 - g 100 -4 -5.95286 | opp_overlap 1798145 ACGAAAAACAAAAAA TATG AAG CATA TGTTGTAACGAGAAT TERM 1785 1798408 - 1798396 - g 72 -6.3 -4.2123 | overlap 1798392 GATTGATGTAACAAA GTCAT TTG ATGAC ATAAATACCCAAATA Patl_1499 1798091 - 1798948 + | hypothetical protein Patl_1500 1799792 - 1799244 - | hypothetical protein TERM 1786 1800186 - 1800219 + H 79 -8.3 -4.07687 | gap 1, opp_overlap 1800186 1800189, overlap 1800218 TGGTTTACGTACAGA GTAGTCGTTGACGTTT TTT AAAC-TCAACGACGGC TTTTGGCACAAAGCT TERM 1787 1800216 - 1800189 - H 76 -10.8 -2.7035 | gap 1, opp_overlap 1800186, overlap 1800186 TTTACGTACAGAGTA GTCGTTGACGTTT TTT AAAC-TCAACGAC GGCTTTTGGCACAAA TERM 1788 1801644 - 1801616 - g 70 -9 -3.36655 | gap 1 CCACACAGACAGGAA CGTA-CATCTTGC TAGT GCAAGACGGTACG AGTCGACGTGAACAG TERM 1789 1802298 - 1802270 - g 72 -9 -3.52522 | gap 1 CCACACAAACAGGAA CGTA-CATCTTGC TAGT GCAAGACGGTACG AGTCGACGTGATGAG Patl_1501 1800877 - 1805007 + | peptidase-like Patl_1502 1805125 - 1805736 + | hypothetical protein TERM 1790 1805720 - 1805761 + T 95 -13.3 -3.53091 | gap 1, opp_overlap 1805719 1805728, overlap 1805728 CGTGTCGATACAGAC GGCATAAACCAAGCTGA-TA CGT TATTCGGCTTGGTTTATGAC TTTAAGGAAACGCAT TERM 1791 1805728 - 1805753 + T 75 -7.7 -4.02132 | gap 1, opp_overlap 1805719 1805728, overlap 1805720 TACAGACGGCATAAA CCAAGCTGA-TA CGT TATTCGGCTTGG TTTATGACTTTAAGG Patl_1503 1808088 - 1805833 - | tetratricopeptide TPR_2 TERM 1792 1805984 - 1806006 + g 78 -5.4 -4.79949 | AACGATACTGGGTCC GCCGCGGCAT TGA GTGCCTCAGC TTGTTTTTTTAAAGA TERM 1793 1808307 - 1808279 - H 73 -7.5 -4.00532 | opp_overlap 1808281 1808287, overlap 1808281 TTGCCAAATATCAAA CAGTGAACGAACT AAA AGTTCTTTCACTT CAATATGTTGTGGCA TERM 1794 1808281 - 1808305 + G 71 -10.1 -3.20633 | opp_overlap 1808279 1808281, overlap 1808287 GCCAAATATCAAACA GTGAACGAACT AAA AGTTCTTTCAC TTCAATATGTTGTGG TERM 1795 1808305 - 1808281 - g 75 -10.1 -3.5913 | opp_overlap 1808281 1808287, overlap 1808279 GCCAAATATCAAACA GTGAACGAACT AAA AGTTCTTTCAC TTCAATATGTTGTGG Patl_1504 1808281 - 1808664 + | hypothetical protein Patl_1505 1808668 - 1809723 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Patl_1506 1809716 - 1811134 + | aldehyde dehydrogenase TERM 1796 1811203 - 1811231 + T 100 -8.9 -5.71983 | opp_overlap 1811200 1811203 AAATGAAAGCAACGA GCGAGCCTAATAT TCG AAATTAGGGTCGC TTTTTTTATGCTTGA Patl_1507 1812735 - 1811470 - | major facilitator transporter Patl_1508 1813124 - 1812819 - | YciI-like protein Patl_1509 1813891 - 1813136 - | GntR family transcriptional regulator TERM 1797 1813366 - 1813380 + g 77 -7.1 -4.46493 | opp_overlap 1813366 CTAAAGCTTCAATCA CAGCG TAGAT CGCTG TTTTGGTATCTTTGA Patl_1510 1813984 - 1815333 + | MmgE/PrpD Patl_1511 1815337 - 1816755 + | MmgE/PrpD Patl_1512 1816877 - 1818235 + | coenzyme F390 synthetase-like TERM 1798 1819121 - 1819133 + G 83 -10.5 -3.81951 | overlap 1819123 ACGACTTTGGCGCAG CCCGC AGA GCGGG TTTGCTGCTGTGCGA Patl_1513 1818235 - 1819581 + | amidase TERM 1799 1819701 - 1819681 - T 70 -8.3 -3.32561 | overlap 1819676 1819684 ATAGATTAAATCTAA CAAGTGGCA AAG CGCCACTTA AAGACATTGAATGCT TERM 1800 1819698 - 1819684 - T 70 -7.8 -3.78904 | overlap 1819681 1819676 GATTAAATCTAACAA GTGGCA AAG CGCCAC TTAAAGACATTGAAT Patl_1514 1820228 - 1819845 - | hypothetical protein Patl_1515 1820539 - 1820225 - | hypothetical protein TERM 1801 1820566 - 1820582 + H 83 -10.9 -3.70676 | opp_overlap 1820566, overlap 1820562 TGTAATTAATTAAAA GCGCTAT TGA ATAGCGC TTGCTTTTAAATATA TERM 1802 1820582 - 1820566 - H 91 -10.9 -4.4959 | opp_overlap 1820562 1820566 TGTAATTAATTAAAA GCGCTAT TGA ATAGCGC TTGCTTTTAAATATA Patl_1516 1820659 - 1821555 + | LysR family transcriptional regulator Patl_1517 1822453 - 1821989 - | GCN5-related N-acetyltransferase Patl_1518 1824100 - 1822628 - | amidohydrolase Patl_1519 1825355 - 1824159 - | peptidase M14, carboxypeptidase A TERM 1803 1825386 - 1825362 - R 100 -10.8 -5.24531 | gap 1, opp_overlap 1825362 1825360 1825358 1825367 ATGGGTCATAAAAAA GCCAATCAGCG TATC CGC-GATTGGC TGTGTTGCTAAAGGG TERM 1804 1825362 - 1825386 + r 79 -10.8 -3.12895 | gap 1, opp_overlap 1825362, overlap 1825360 1825358 1825367 ATGGGTCATAAAAAA GCCAATCAGCG TATC CGC-GATTGGC TGTGTTGCTAAAGGG Patl_1520 1828569 - 1825402 - | TonB-dependent receptor TERM 1805 1826445 - 1826435 - G 80 -6.8 -4.64766 | overlap 1826436 CCCACATCTGAAAAA CGCT CAT AGCG AGCAGCCAATTGCAT TERM 1806 1827687 - 1827697 + g 79 -4.6 -5.19879 | ATTGGAACTGCACGT CGCC ACC GGTG TTTTTGTCTTTGAGA TERM 1807 1828543 - 1828496 - G 79 -9.2 -4.11216 | gap 1, opp_overlap 1828495 1828494 1828498 GTTTGAGCTGCAAAA CTGTTCCCT-GTTTGCAGCATGA GCA TAATGCTGCAAGCAAGGGAGCTG AGTTTAAACGACTGA TERM 1808 1828498 - 1828541 + g 86 -14.8 -2.64274 | gap 1, opp_overlap 1828496, overlap 1828495 1828494 TTGAGCTGCAAAACT GTTCCCT-GTTTGCAGCATGA GCA TAATGCTGCAAGCAAGGGAGC TGAGTTTAAACGACT Patl_1521 1829666 - 1828656 - | putative FecR Patl_1522 1830232 - 1829663 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1809 1830629 - 1830605 - g 75 -2.8 -5.15634 | gap 1, overlap 1830620 TATCCGATTAAAAAA CGCTGTTGGGA ATTA CCCCAAG-GCG CGTGGGAGGAAAACC Patl_1523 1830404 - 1830946 + | NUDIX hydrolase TERM 1810 1831729 - 1831707 - g 74 -8.4 -3.9444 | opp_overlap 1831707, overlap 1831710 TAAATGGCAATGAAA TTACTGGCCA TTA TGGCCAGCAC TATGATATTTCGCAG TERM 1811 1831726 - 1831710 - g 80 -12.3 -3.02434 | opp_overlap 1831707, overlap 1831707 ATGGCAATGAAATTA CTGGCCA TTA TGGCCAG CACTATGATATTTCG Patl_1524 1831169 - 1831828 + | thiopurine S-methyltransferase TERM 1812 1831863 - 1831840 - T 93 -12.5 -4.11484 | CTGAAGGCGCGAAAA GGCGAGTCT TAATTC AGACTCGCC GCAACTGACCGCTTA Patl_1525 1832203 - 1831880 - | hypothetical protein Patl_1526 1833231 - 1832200 - | hypothetical protein Patl_1527 1834060 - 1833368 - | two component transcriptional regulator Patl_1528 1835508 - 1834057 - | periplasmic sensor signal transduction histidine kinase TERM 1813 1835143 - 1835132 - G 77 -7.2 -4.41348 | TGGGGGTCAAATAAA GCCG TTGG CGGC GCCGCATCTTGCCCG Patl_1529 1835646 - 1835894 + | hypothetical protein Patl_1530 1836011 - 1836355 + | hypothetical protein TERM 1814 1836457 - 1836418 - T 75 -5.8 -4.68593 | gap 1, opp_overlap 1836418 TTTATCATTTAAAAA GGCGCAAATAACGTCGG TTTTTCT CCGAT-TTGTTTGCGCC TTTTTCCGATTTTTA TERM 1815 1836418 - 1836457 + T 93 -10.2 -4.7657 | gap 1, opp_overlap 1836418 TTTATCATTTAAAAA GGCGCAAATAACGTCGG TTTTTCT CCGAT-TTGTTTGCGCC TTTTTCCGATTTTTA Patl_1531 1837269 - 1836496 - | UDP-glucose/GDP-mannose dehydrogenase Patl_1532 1837569 - 1838114 + | 4-vinyl reductase, 4VR TERM 1816 1838290 - 1838278 - g 85 -3.3 -5.45652 | opp_overlap 1838278 ATGGCTAAGAAAAAA CAAGC TGA GCTAG AGTTTTTACGCCAAA TERM 1817 1838855 - 1838840 - g 79 -3.2 -5.37345 | TTCAATCAGAAAAAA TGGCCT CTTT AGGGCA GCTTGCCGCTGGCGT Patl_1533 1838107 - 1839600 + | histidine kinase Patl_1534 1840897 - 1839578 - | response regulator receiver protein Patl_1535 1842635 - 1840935 - | periplasmic sensor signal transduction histidine kinase TERM 1818 1842164 - 1842182 + g 88 -7.5 -5.08255 | TTAACTCTACAACTG CAATGGA GGTGG TCCATTG TTTTATTTTGGCGAT Patl_1536 1843498 - 1842674 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 1819 1842714 - 1842753 + g 80 -7.2 -4.56775 | overlap 1842715 1842752 CGAATGTCATCCCAG TCATTATCTTCTGCGCTT TCAA AAGCGCTAAAGTTAATGG TTTTTAGCAGACCCT TERM 1820 1842960 - 1842940 - G 70 -9 -3.3785 | TGAACGTACGCATAA TGCCGCCT CCTGC AGGCAGCA AACCTCTTGCGACAG Patl_1537 1844391 - 1843573 - | response regulator receiver protein TERM 1821 1845302 - 1845288 - H 72 -8.6 -3.51904 | TATTAAAGGGAAAGA CGAACA AGG TGTTCG AGTGCGAATTGAAGG TERM 1822 1847089 - 1847075 - g 72 -5 -4.59773 | CCTGAGTTTGAAAAA CTGTTA TTA CAACAG CCGTTTATGCACTAA Patl_1538 1845413 - 1847104 + | response regulator receiver modulated diguanylate phosphodiesterase Patl_1539 1847661 - 1847101 - | Smr protein/MutS2 Patl_1540 1847774 - 1848703 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Patl_1541 1848774 - 1849874 + | chorismate synthase Patl_1542 1849925 - 1851061 + | major facilitator transporter TERM 1823 1851334 - 1851345 + F 95 -4.4 -5.85737 | overlap 1851337 CTTCAGCAAACCTCG CCTT GAAA AAGG TTTTTTTATTACTCT Patl_1543 1851381 - 1851587 + | cold-shock DNA-binding domain-containing protein TERM 1824 1851643 - 1851625 - T 100 -11.8 -5.47399 | opp_overlap 1851625 CGAATTCCAAAAAAA GGCAAACT TCT AGTTTGCC TTTTTTTATGCTTGA TERM 1825 1851625 - 1851643 + T 100 -11.8 -5.71983 | opp_overlap 1851625 CGAATTCCAAAAAAA GGCAAACT TCT AGTTTGCC TTTTTTTATGCTTGA ansA 1852763 - 1851714 - | cytoplasmic asparaginase I Patl_1545 1853823 - 1852837 - | hypothetical protein Patl_1546 1854567 - 1853830 - | dienelactone hydrolase Patl_1547 1854714 - 1854995 + | hypothetical protein Patl_1548 1855036 - 1855383 + | hypothetical protein Patl_1549 1855519 - 1855803 + | hypothetical protein Patl_1550 1856346 - 1855822 - | hypothetical protein TERM 1826 1856386 - 1856396 + r 83 -3.2 -5.55664 | GCTTACTAGGCTAAG TGCT ACC AGCG TTTTTTTAATCCTGA Patl_1551 1856818 - 1856534 - | hypothetical protein Patl_1552 1857649 - 1856918 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1827 1857970 - 1857992 + r 79 -10.5 -3.56161 | overlap 1857978 TCCCTTTAAAATTCG CCCGGAGGG AATCC CCCTGCGGG TTCTGTACTGCGTTC TERM 1828 1858158 - 1858183 + r 93 -10.5 -4.96848 | opp_overlap 1858163, overlap 1858163 TACGTTATAGAAACA AAAAACTCGCC GATT GGCGAGTTTTG TTTTTATATGCAAAC TERM 1829 1858178 - 1858163 - R 100 -10.4 -5.76237 | opp_overlap 1858163 1858158 TATAGAAACAAAAAA CTCGCC GATT GGCGAG TTTTGTTTTTATATG TERM 1830 1858163 - 1858178 + r 100 -10.4 -5.38839 | opp_overlap 1858163, overlap 1858158 TATAGAAACAAAAAA CTCGCC GATT GGCGAG TTTTGTTTTTATATG Patl_1553 1859174 - 1858212 - | lipoyl synthase Patl_1554 1859820 - 1859167 - | lipoate-protein ligase B TERM 1831 1859846 - 1859867 + r 75 -10.2 -2.97 | opp_overlap 1859846, overlap 1859848 1859864 TGTCCTATAGAAGAA TAGCGCAC AGACAG GTGCGCTA TATATAGCTTGCTTT TERM 1832 1859867 - 1859846 - R 84 -10.2 -3.88232 | opp_overlap 1859846 1859848 1859864 TGTCCTATAGAAGAA TAGCGCAC AGACAG GTGCGCTA TATATAGCTTGCTTT Patl_1555 1860145 - 1859882 - | hypothetical protein Patl_1556 1861338 - 1860166 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 1833 1860204 - 1860228 + g 74 -5.7 -4.59414 | opp_overlap 1860207, overlap 1860207 GTTTAACGAAGTCTA CAAGGCGGT CAATCAT ACCGCCTTC TTTTACTTCTTGTAA TERM 1834 1860207 - 1860225 + g 79 -7.4 -4.38092 | opp_overlap 1860207, overlap 1860204 TAACGAAGTCTACAA GGCGGT CAATCAT ACCGCC TTCTTTTACTTCTTG TERM 1835 1861460 - 1861450 - R 78 -4 -5.18726 | CGCTGACAACAAAAA TTGT TAC ACAA AACAAAATCGTTAAA Patl_1557 1862480 - 1861515 - | rare lipoprotein A TERM 1836 1862081 - 1862094 + g 79 -4.5 -5.24449 | CGTTTACCCGGACTA TGGCT TCGC GGCCA TTTTTTAGGTTTGTC Patl_1558 1863588 - 1862470 - | lytic murein transglycosylase B TERM 1837 1863454 - 1863442 - G 72 -9.1 -3.61715 | opp_overlap 1863447, overlap 1863446 TATGGCGTCCAAGAA GGCAG TTT CTGCC TCAGGCAGAGATTGT TERM 1838 1863447 - 1863465 + g 73 -9.6 -3.35283 | opp_overlap 1863442 1863446 CGTCCAAGAAGGCAG TTTCTGCC TCA GGCAGAGA TTGTGCACTACTTAT Patl_1559 1864763 - 1863639 - | rod shape-determining protein RodA Patl_1560 1866710 - 1864779 - | peptidoglycan glycosyltransferase Patl_1561 1867183 - 1866713 - | SPOUT methyltransferase superfamily protein Patl_1562 1867547 - 1867230 - | iojap-like protein Patl_1563 1868245 - 1867586 - | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 1839 1867786 - 1867801 + g 71 -7.6 -3.8579 | overlap 1867776 TAGTGGCGACCTGTC GCTCTA CTAG TAGAGC TTTCAATTCTTCACT TERM 1840 1867959 - 1867931 - G 83 -4.5 -5.29782 | opp_overlap 1867931 CATACCGATAAAAAA GCATAGAGGATGC TTT GGATACTCTTTGC GCAATGCTCGCAGCG Patl_1564 1869264 - 1868242 - | DNA polymerase III, delta subunit TERM 1841 1869211 - 1869223 + g 80 -6.9 -4.62471 | opp_overlap 1869211 1869204 AAAAATGAGATAAAA GGGCT GCA GGCCC TTTTTCAACGTTGCG TERM 1842 1869223 - 1869211 - G 78 -6.2 -4.68446 | opp_overlap 1869211, overlap 1869204 AAAAATGAGATAAAA GGGC TGCAG GCCC TTTTTCAACGTTGCG Patl_1565 1869785 - 1869264 - | rare lipoprotein B leuS 1872413 - 1869801 - | leucyl-tRNA synthetase TERM 1843 1870126 - 1870112 - G 80 -6.4 -4.78572 | GGTTAAGTAATAAAA CCACTG ATT CAATGG CTTCGCGCAGCACCG TERM 1844 1871484 - 1871498 + g 83 -4.2 -5.28778 | opp_overlap 1871484, overlap 1871486 GTGAATAGCGAACAA GCCTGT GTC ACAGCC TTTTTTCTCCATAGT Patl_1567 1873202 - 1875589 + | peptidase S16, lon-like Patl_1568 1875674 - 1876168 + | peptidylprolyl isomerase, FKBP-type Patl_1569 1876651 - 1876292 - | hypothetical protein TERM 1845 1876920 - 1876933 + G 70 -5.3 -4.42386 | CGATAACGGCCATGT TATCG CGTG CGATA TTTTGTCGATGGACC Patl_1570 1876684 - 1877313 + | ribosomal RNA methyltransferase RrmJ/FtsJ Patl_1571 1877366 - 1879336 + | ATP-dependent metalloprotease FtsH TERM 1846 1879358 - 1879383 + F 100 -14.9 -5.78622 | opp_overlap 1879358, overlap 1879347 GGGTCGTTAATACAA CGCTTTGTTGA GTGA TCAACAAAGCG TTTTTTTTAAGCTCA TERM 1847 1879383 - 1879358 - f 100 -14.9 -3.65812 | opp_overlap 1879347 1879358 GGGTCGTTAATACAA CGCTTTGTTGA GTGA TCAACAAAGCG TTTTTTTTAAGCTCA TERM 1848 1879563 - 1879573 + G 78 -5.4 -4.75472 | opp_overlap 1879555 GCTGAAATGATTGCA TCAG GGG CTGA TTTTATTGATGTAGG Patl_1572 1879422 - 1880246 + | dihydropteroate synthase Patl_1573 1880249 - 1881592 + | phosphoglucosamine mutase Patl_1574 1881722 - 1882471 + | triosephosphate isomerase secG 1882481 - 1882852 + | preprotein translocase subunit SecG TERM 1849 1882962 - 1882983 + F 100 -13.1 -5.60993 | opp_overlap 1882962 CCATATTTTGGAAAA GGCTGTAAC GTAA GTTACAGCC TTTTTTTATGGCACA TERM 1850 1882983 - 1882962 - f 100 -13.1 -4.10657 | opp_overlap 1882962 CCATATTTTGGAAAA GGCTGTAAC GTAA GTTACAGCC TTTTTTTATGGCACA Patl_1576 1883052 - 1884197 + | ABC transporter related rpsP 1884691 - 1884942 + | 30S ribosomal protein S16 Patl_1578 1884973 - 1885503 + | 16S rRNA processing protein RimM TERM 1851 1885790 - 1885765 - g 88 -5.5 -5.60993 | CTGCCGAGAAAAAAA CTAAGGTGA TTTATCTC TCACCTCAG GGGAAAACATTAACA Patl_1579 1885503 - 1886300 + | tRNA (guanine-N1)-methyltransferase rplS 1886290 - 1886652 + | 50S ribosomal protein L19 TERM 1852 1886703 - 1886687 - T 100 -13.7 -5.31456 | opp_overlap 1886687 TTAACTTATAAAAAA GCCCGCA TTT TGCGGGC TTTTTACTGCCTGTT TERM 1853 1886687 - 1886703 + T 100 -13.7 -4.76644 | opp_overlap 1886687 TTAACTTATAAAAAA GCCCGCA TTT TGCGGGC TTTTTACTGCCTGTT Patl_1581 1887104 - 1886721 - | glyoxalase family protein Patl_1582 1887195 - 1887650 + | MerR family transcriptional regulator TERM 1854 1887951 - 1887963 + G 71 -7.7 -3.85817 | TGAATATGTGGGATA TACCC GAA GGGTA TTTGTGCCCGCCGGT Patl_1583 1887686 - 1888678 + | putative SAM-dependent methyltransferase Patl_1584 1888849 - 1889439 + | hexapaptide repeat-containing transferase Patl_1585 1889483 - 1890241 + | heat shock protein DnaJ-like TERM 1855 1890278 - 1890262 - T 100 -10.1 -5.66684 | opp_overlap 1890262 CAACGGACAAAAAAA GCCCTGC TAG ACAGGGC TTTACATACTTATTT TERM 1856 1890262 - 1890278 + T 79 -9.4 -3.74658 | opp_overlap 1890262 CAACGGACAAAAAAA GCCCTG CTAGA CAGGGC TTTACATACTTATTT Patl_1586 1892518 - 1890308 - | peptidyl-dipeptidase Dcp TERM 1857 1892192 - 1892210 + g 73 -7.4 -4.09685 | overlap 1892194 AGCTTGACCTGATTT TTCCATCG CTT CGATGGTA TTTTCAAACGTCGGG TERM 1858 1892194 - 1892208 + g 75 -10 -3.64716 | overlap 1892192 CTTGACCTGATTTTT CCATCG CTT CGATGG TATTTTCAAACGTCG Patl_1587 1892943 - 1894034 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1859 1894130 - 1894120 - g 72 -8.2 -3.72576 | overlap 1894121 GGCGCTGTTAGCAAA GCGC GCT GCGC TGACTGAACAGGTTG TERM 1860 1894454 - 1894436 - g 72 -3 -5.06414 | overlap 1894438 GTTCTTGAACAAAAA GATTGGCC TAG GGCCGATG AGATGTTCGCCTCGG tyrA 1894046 - 1895173 + | bifunctional chorismate mutase/prephenate dehydrogenase Patl_1589 1895203 - 1895871 + | hypothetical protein TERM 1861 1895882 - 1895861 - T 100 -14.5 -4.78029 | opp_overlap 1895861 1895864 GCAACAAAATGAAAA GAAGGCGCT AATT AGCGCCTTC TTTATGTCAAATCGA TERM 1862 1895861 - 1895882 + T 100 -14.5 -4.05033 | opp_overlap 1895861, overlap 1895864 GCAACAAAATGAAAA GAAGGCGCT AATT AGCGCCTTC TTTATGTCAAATCGA TERM 1863 1895864 - 1895879 + T 89 -10.4 -4.15029 | opp_overlap 1895861, overlap 1895861 ACAAAATGAAAAGAA GGCGCT AATT AGCGCC TTCTTTATGTCAAAT Patl_1590 1897126 - 1895927 - | chorismate mutase Patl_1591 1898135 - 1897335 - | response regulator receiver protein Patl_1592 1898488 - 1898168 - | translation initiation factor SUI1 Patl_1593 1898622 - 1898927 + | anti-sigma-factor antagonist Patl_1594 1898961 - 1900607 + | response regulator receiver protein Patl_1595 1900604 - 1901077 + | GCN5-related N-acetyltransferase Patl_1596 1901119 - 1902174 + | extracellular solute-binding protein TERM 1864 1902242 - 1902283 + F 75 -5.7 -4.77757 | overlap 1902236 GCGAGCCTTGGTTAT GGACCGTTACTGCCTTTAG TTTA CTTTTGGCAGTGCCGGTTC TTTTGATTTTTAGCA TERM 1865 1902563 - 1902576 + G 71 -3.8 -4.74103 | opp_overlap 1902563, overlap 1902561 CTGGGCCGTTACAAA CGCA GCTGCG TGCG TTTTTCAATTGGACC TERM 1866 1902743 - 1902758 + G 73 -4 -4.85599 | overlap 1902746 GCCGCAGTATGGGCG TAAGCG GCTT TGCTTA TTTTTGTAAAGTCGC TERM 1867 1902746 - 1902773 + G 72 -5.6 -4.54727 | overlap 1902743 1902764 GCAGTATGGGCGTAA GCGGCTTTGC TTATTTTT GTAAAGTCGC TTTTCCTTTAGCGCG TERM 1868 1903244 - 1903254 + G 78 -5.4 -4.81212 | TTATCGCTGTGAGCT TAGC ATT GCTA TTTTCTTATGCTAAG Patl_1597 1902274 - 1903860 + | binding-protein-dependent transport systems inner membrane component TERM 1869 1904193 - 1904183 - g 70 -2.4 -5.09204 | ACACCTCAAGAAAAA GCCC GAC GGGT GAATGAGTTACTTGC Patl_1598 1903853 - 1904899 + | ABC transporter related TERM 1870 1905050 - 1905030 - g 72 -8.3 -3.65812 | TTGGTTTGAAGAGAA GACTCGTCA AAA TGAGGAGTC AGGTCAGGGGAGCTC Patl_1599 1904995 - 1905444 + | hypothetical protein Patl_1600 1905833 - 1906177 + | hypothetical protein TERM 1871 1907068 - 1907058 - g 76 -8.2 -4.15565 | CTCATGAGTTGAAAA CGCC ACT GGCG AGCATTAAAGAAGGC Patl_1601 1906292 - 1907695 + | periplasmic sensor signal transduction histidine kinase Patl_1602 1907695 - 1908297 + | hypothetical protein TERM 1872 1909289 - 1909279 - g 84 -8.2 -4.68384 | overlap 1909281 ACCTACTTAAGAAAA GCGC CGA GCGC CATGAAGTGCGCGTC Patl_1603 1908294 - 1909643 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 1873 1909686 - 1909707 + F 100 -13.1 -5.93252 | TGGATTGCCCCGTAA GCGCGAATA TTGT TATTCGCGC TTTTTTGTTTTTAGG TERM 1874 1910115 - 1910138 + G 88 -7.4 -4.93296 | opp_overlap 1910114 GCGTTGGGTAAAAGC CGTGCCTGAG GATT TTCACGCACG TTTTTCTGCTACTGC Patl_1604 1909837 - 1910628 + | tRNA pseudouridine synthase A Patl_1605 1910766 - 1911614 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 1875 1911651 - 1911673 + G 76 -12 -2.6462 | opp_overlap 1911653, overlap 1911650 1911649 1911653 AATTTATCTTCTATA CAGGCCTCTA GTT TTGAGGCCTG GTCTTTAAATGAGTG TERM 1876 1911866 - 1911849 - g 82 -11.3 -3.62046 | GCATTTCTTGAACAA GCCTGCT TGGC AGCAGGC AAAAGGGTTGGAGTT TERM 1877 1912651 - 1912669 + G 72 -5.2 -4.62471 | opp_overlap 1912651, overlap 1912653 TGAAAGACAAAGATA TTCGCTCG AGT CTAGCGGA TTTTTCAAACTTAAA Patl_1606 1911630 - 1912910 + | FolC bifunctional protein Patl_1607 1912907 - 1913551 + | sporulation related TERM 1878 1913879 - 1913890 + G 76 -4.4 -4.99043 | opp_overlap 1913867, overlap 1913868 1913870 CTATTCGCAACGGCG TAGC GATT GCTA TTTTGTTTGTGGCGA Patl_1608 1913689 - 1914177 + | colicin V production protein Patl_1609 1914204 - 1915721 + | amidophosphoribosyltransferase TERM 1879 1915778 - 1915745 - T 83 -10.6 -3.63744 | gap 1, opp_overlap 1915746 1915753, overlap 1915753 TGTGTTCTTAAAACA TA-AAAAAAGCGCTG TTATT CAGCGCTTTTTTGTA TCTGCGGTTTGCATA TERM 1880 1915746 - 1915776 + T 81 -11.3 -2.9348 | opp_overlap 1915745 1915753, overlap 1915753 GTGTTCTTAAAACAT AAAAAAAGCGCTG TTATT CAGCGCTTTTTTG TATCTGCGGTTTGCA TERM 1881 1915753 - 1915769 + T 100 -9.4 -5.4251 | opp_overlap 1915745 1915753, overlap 1915746 TAAAACATAAAAAAA GCGCTG TTATT CAGCGC TTTTTTGTATCTGCG TERM 1882 1915769 - 1915753 - T 100 -9.4 -5.9362 | opp_overlap 1915753 1915746, overlap 1915745 TAAAACATAAAAAAA GCGCTG TTATT CAGCGC TTTTTTGTATCTGCG Patl_1610 1916487 - 1915888 - | hypothetical protein TERM 1883 1917729 - 1917763 + G 72 -4.8 -4.58283 | opp_overlap 1917729 1917739 ACATTCGACTTAATA CGCCGGACAATGAGCC TTT GGCTGACTGGCCAGTG TTTTTACAGAAATTA Patl_1611 1916792 - 1917817 + | secretion protein HlyD TERM 1884 1918132 - 1918107 - g 76 -4 -5.00884 | overlap 1918111 AGGTCTTGGAAAAAA CCTATACGCT GATTTG AGCGTAGAAG AAAACTTGGATTTTT TERM 1885 1919159 - 1919191 + G 72 -2.7 -4.9792 | TATTTTGGCGTTTAT TAGTGGAGTTATCAC GCA GAGATAAAGTCACTA TTTTTATATCCACTC Patl_1612 1917817 - 1920624 + | ABC transporter related Patl_1613 1920628 - 1921752 + | ABC-2 type transporter TERM 1886 1922064 - 1922080 + G 71 -3.6 -4.90869 | opp_overlap 1922066, overlap 1922057 1922053 1922050 TCTGTGAGTTAAAGG CAGCGC AAAGC GCGATG TTTTTAATTCGTCGT Patl_1614 1921934 - 1922686 + | tRNA-hydroxylase Patl_1615 1923268 - 1922702 - | HAD superfamily hydrolase-like TERM 1887 1923454 - 1923440 - g 79 -2.8 -5.34555 | opp_overlap 1923453 GCACACTAGAAAAAA CCTC CGTCTTT GAGG GCATAGCACCCTTGC Patl_1616 1923361 - 1924011 + | DoxX TERM 1888 1924053 - 1924031 - f 70 -3.3 -4.94902 | opp_overlap 1924035, overlap 1924035 CAATTACTATAAAAA TCAAGGCGC ATTGG GCGCCTTTT TTTATTGCTCCGAGT TERM 1889 1924035 - 1924049 + F 100 -8.5 -5.84381 | opp_overlap 1924031 1924035 TACTATAAAAATCAA GGCGC ATTGG GCGCC TTTTTTTATTGCTCC TERM 1890 1924049 - 1924035 - f 77 -8.5 -3.89607 | opp_overlap 1924035, overlap 1924031 TACTATAAAAATCAA GGCGC ATTGG GCGCC TTTTTTTATTGCTCC Patl_1617 1924127 - 1924678 + | nitroreductase TERM 1891 1924773 - 1924737 - T 80 -6.4 -4.77896 | opp_overlap 1924737 1924738 1924768, overlap 1924738 1924768 TAATCAACTCAAAAA TGCGGTTCTGGACGGT GAGCT ATCGACCAGAGCCGCG TTATCACGGCTTTAT TERM 1892 1924737 - 1924773 + T 95 -13.7 -3.32562 | opp_overlap 1924737 1924738 1924768, overlap 1924738 1924768 TAATCAACTCAAAAA TGCGGTTCTGGACGGTG AGC TATCGACCAGAGCCGCG TTATCACGGCTTTAT TERM 1893 1924738 - 1924772 + T 95 -15 -2.59055 | opp_overlap 1924737 1924738 1924768, overlap 1924737 1924768 AATCAACTCAAAAAT GCGGTTCTGGACGGTG AGC TATCGACCAGAGCCGC GTTATCACGGCTTTA TERM 1894 1924772 - 1924738 - T 77 -9.9 -3.45653 | opp_overlap 1924738 1924737 1924768, overlap 1924737 1924768 AATCAACTCAAAAAT GCGGTTCTGGACGGT GAGCT ATCGACCAGAGCCGC GTTATCACGGCTTTA TERM 1895 1924768 - 1924783 + T 77 -6 -4.52897 | opp_overlap 1924738 1924737 1924768, overlap 1924738 1924737 GAGCTATCGACCAGA GCCGCG TTAT CACGGC TTTATTCTTCGTTAT Patl_1618 1926128 - 1924785 - | DEAD/DEAH box helicase-like Patl_1619 1926878 - 1926222 - | 3-oxoacid CoA-transferase, B subunit Patl_1620 1927607 - 1926888 - | 3-oxoacid CoA-transferase, A subunit TERM 1896 1927265 - 1927252 - G 71 -3.7 -4.82901 | overlap 1927259 1927260 GTTGCCGTATAAAAA GCAGG AATG CCGGC ACCGCCAGCGCGCAT TERM 1897 1927713 - 1927677 - H 70 -8.3 -3.3907 | opp_overlap 1927689, overlap 1927679 1927680 GTAAAGTTGAATTAA TATGCTTATTAATAAAT AAA ATTTATTAATAAGCTTC GAGTAACTCCCTCAT TERM 1898 1927711 - 1927679 - H 79 -10.9 -3.25941 | opp_overlap 1927689, overlap 1927677 1927680 AAAGTTGAATTAATA TGCTTATTAATAAAT AAA ATTTATTAATAAGCT TCGAGTAACTCCCTC TERM 1899 1927710 - 1927680 - H 93 -14.4 -2.54841 | opp_overlap 1927689, overlap 1927679 1927677 AAGTTGAATTAATAT GCTTATTAATAAAT AAA ATTTATTAATAAGC TTCGAGTAACTCCCT Patl_1621 1927727 - 1928620 + | LysR family transcriptional regulator Patl_1622 1929433 - 1928666 - | hypothetical protein TERM 1900 1929016 - 1929033 + g 76 -2.5 -5.41746 | overlap 1929017 CCTTGGTGTACTCAG AGCGCAG CAAC CCGCGCA TTTTTTTAACGCATT Patl_1623 1930179 - 1929484 - | histidine kinase TERM 1901 1929601 - 1929629 + g 77 -11.8 -2.92038 | opp_overlap 1929601, overlap 1929604 1929627 TAATCTAGCAAAAAA TAAGCCAAGCCC TGTGC GGCCTTGGCTTA TGTCATAATTTTGCA TERM 1902 1929629 - 1929601 - G 100 -11.8 -5.18357 | opp_overlap 1929601 1929604 1929627 TAATCTAGCAAAAAA TAAGCCAAGCCC TGTGC GGCCTTGGCTTA TGTCATAATTTTGCA TERM 1903 1929604 - 1929626 + g 72 -9.1 -3.59405 | opp_overlap 1929601, overlap 1929601 TCTAGCAAAAAATAA GCCAAGCCC TGTGC GGCCTTGGC TTATGTCATAATTTT TERM 1904 1929845 - 1929860 + g 88 -3.3 -5.75599 | opp_overlap 1929832, overlap 1929832 AAGTCGGGCTCTTGC TCAAC GTTTAG GTTGA TTTTTTTGTGATTTA cysB 1930376 - 1931350 + | transcriptional regulator CysB TERM 1905 1931403 - 1931439 + T 80 -11.2 -2.87463 | gap 1, opp_overlap 1931412, overlap 1931412 TTGTTCACCTCAAAA CG-AAAAAAAGAGGCAA TGTA TTGCCTCTTTTTTTGTG TCTGTAGCCAGGCTT TERM 1906 1931429 - 1931412 - T 100 -9.9 -5.79588 | opp_overlap 1931403 1931412 TCAAAACGAAAAAAA GAGGCAA TGTA TTGCCTC TTTTTTTGTGTCTGT TERM 1907 1931412 - 1931429 + T 100 -9.9 -5.77988 | opp_overlap 1931412, overlap 1931403 TCAAAACGAAAAAAA GAGGCAA TGTA TTGCCTC TTTTTTTGTGTCTGT Patl_1625 1932862 - 1931489 - | L-serine dehydratase 1 TERM 1908 1931517 - 1931529 + g 87 -10.5 -4.05902 | ATGTTAACGGCTAAC CCGCC CCG GGCGG TTTCCTTATACTTTG TERM 1909 1931560 - 1931574 + g 72 -6.4 -4.33767 | ATTTCATGTCATTAC CCGTGT CCC ACATGG TTTTAATGACTTTGT Patl_1626 1933693 - 1933100 - | NUDIX hydrolase Patl_1627 1935074 - 1933698 - | para-aminobenzoate synthase, subunit I TERM 1910 1936504 - 1936479 - g 71 -9.7 -3.17212 | GCAGTAGGTGACGAA GTTGTGGGACC TGCA GGCCCAACAAC GGCTACCCGTATGGA Patl_1628 1935321 - 1936850 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 1911 1936873 - 1936892 + F 93 -8.5 -5.31275 | opp_overlap 1936873 1936871 TGCTGATTTAGAATA GGCGCCG GGTTAA TGGCGCC TTTTTTGTGCTACAC Patl_1629 1937064 - 1938620 + | hypothetical protein Patl_1630 1938617 - 1939288 + | pseudouridylate synthase Patl_1631 1939622 - 1940917 + | hypothetical protein TERM 1912 1940953 - 1940981 + F 93 -9 -5.29846 | GCTTTTAGAATCATG CACCATAGGTTA TTCGT TGATCTATGGTG TTTTTATTTGGGGTT TERM 1913 1943385 - 1943364 - g 72 -5.7 -4.40572 | overlap 1943354 1943365 1943366 AGAATTGCTAGAAAA GCCAGCAGC ACCT GCTGAAGGC AACGAGTAATCGTTT Patl_1632 1941283 - 1943394 + | polynucleotide phosphorylase/polyadenylase TERM 1914 1943459 - 1943475 + T 100 -13.7 -5.5604 | opp_overlap 1943459 GTGTTGATTTAAGAA GGGAGCC GTC GGCTCCC TTTTTTATTGCTTGG TERM 1915 1943475 - 1943459 - T 95 -13.7 -3.67597 | opp_overlap 1943459 GTGTTGATTTAAGAA GGGAGCC GTC GGCTCCC TTTTTTATTGCTTGG Patl_1633 1944365 - 1943526 - | aldose 1-epimerase TERM 1916 1944417 - 1944391 - R 100 -16 -5.58454 | opp_overlap 1944391 TTGAGATCAAAAAAA GGCAGTCACCTA GTG TAGATGACTGCC TTTTCACAATAAAGA TERM 1917 1944391 - 1944417 + r 100 -13.8 -4.11216 | opp_overlap 1944391 TTGAGATCAAAAAAA GGCAGTCACCTA GTG TAGATGACTGCC TTTTCACAATAAAGA Patl_1634 1945437 - 1944442 - | glyceraldehyde-3-phosphate dehydrogenase, type I malQ 1945673 - 1947868 + | 4-alpha-glucanotransferase TERM 1918 1947903 - 1947873 - f 73 -6.7 -4.30104 | opp_overlap 1947875, overlap 1947870 1947874 1947877 CAAAGCAATAAATAA CTCAGGCGGCCTG TATGT CAGGCCGCCAACA CTGCAAGGCGGCACA TERM 1919 1947901 - 1947874 - f 73 -9.9 -3.16435 | gap 1, opp_overlap 1947875, overlap 1947873 1947870 1947877 AAAGCAATAAATAAC TCAGGCGGCCTG TATGT CAGGCCGCC-AA CACTGCAAGGCGGCA TERM 1920 1947899 - 1947877 - f 100 -16.3 -2.75986 | opp_overlap 1947875, overlap 1947874 1947873 1947870 GCAATAAATAACTCA GGCGGCCTG TATGT CAGGCCGCC AACACTGCAAGGCGG Patl_1636 1947919 - 1950108 + | glycogen branching enzyme TERM 1921 1951535 - 1951521 - g 87 -10 -4.27192 | AAATGGTGAGCAAAA CCGTGA TGG TCACGG ACATAATTTGTCCGC Patl_1637 1950112 - 1952187 + | glycogen debranching enzyme GlgX Patl_1638 1952316 - 1952699 + | methionine-R-sulfoxide reductase Patl_1639 1953619 - 1952834 - | hypothetical protein TERM 1922 1952874 - 1952924 + g 95 -13.5 -4.02334 | gap 2 ATTTCTTCTTTATAT TGCTCTGCTTTGTCTTCGAGCGACG TTA TGTCGCTTG-AGGCA-GGCAGGGCA TTTCTAATGTCAGTC TERM 1923 1954593 - 1954578 - g 100 -9 -5.03747 | overlap 1954590 AAAGGTGTGAAAAAA GTGCTG TTAA CAGCAC CGGGTAAAGGCGCTA Patl_1640 1953807 - 1955267 + | glyceraldehyde-3-phosphate dehydrogenase TERM 1924 1955330 - 1955361 + F 93 -6.6 -5.4833 | TCGAGTTTCTGAGTG GGCGTGTTACTT TCTTGTTT AGGTAGCGCGCC TTTTTTGTTGGCTGA Patl_1641 1955560 - 1956687 + | peptidase M14, carboxypeptidase A TERM 1925 1956666 - 1956702 + F 89 -10.4 -4.19506 | gap 1, overlap 1956667 TGTTGCCATACGCGC TGTGGTAGATGAATTGC GCTA GCAGTTCATCTAC-ACG TTTTACCATTAGGCT TERM 1926 1956667 - 1956701 + F 83 -11.7 -3.11222 | gap 1, overlap 1956666 GTTGCCATACGCGCT GTGGTAGATGAATTGC GCTA GCAGTTCATCTAC-AC GTTTTACCATTAGGC TERM 1927 1956850 - 1956860 + G 72 -3.2 -5.05153 | TTTCCTTATGTGTTA CTTG GAA CAGG TTTATTTTTTACGAT TERM 1928 1958110 - 1958124 + G 75 -2.8 -5.1675 | overlap 1958102 AGTTTAACGGCGCTG GCGTTT ACC AAAGGC TTTTTTGGTGAGTCA TERM 1929 1958354 - 1958371 + G 74 -8.5 -3.98256 | opp_overlap 1958353, overlap 1958343 1958353 TTGTGGTGATGACAT TGCCTAA CTTA TTAGGCA TATTTTTGCTGCGCA Patl_1642 1956775 - 1958448 + | amino acid carrier protein TERM 1930 1958486 - 1958469 - f 79 -9.8 -3.61988 | opp_overlap 1958469, overlap 1958465 GTATCCATAAATTAA GCGCGG CACAGT CCGCGC TTTCGTGATCTAGTG TERM 1931 1958469 - 1958486 + F 83 -9.8 -3.82665 | opp_overlap 1958469 1958465 GTATCCATAAATTAA GCGCGG CACAGT CCGCGC TTTCGTGATCTAGTG Patl_1643 1958543 - 1958869 + | hypothetical protein Patl_1644 1958869 - 1959150 + | hypothetical protein TERM 1932 1959261 - 1959241 - g 73 -4 -4.77165 | overlap 1959243 CTTGCCAGAACAAAA GTCAATTC TGCAT GAATTGGC GTTCAACGATGAAGA TERM 1933 1959676 - 1959662 - g 76 -2.1 -5.43514 | AAAATAATCAAAAAA GCTTC TAGTG AAAGC ATTAAGTCTCAGGCG TERM 1934 1960018 - 1959997 - g 71 -9.5 -3.1241 | gap 1, overlap 1959993 ACGAGATGTAATAGA TGCCGT-GCA GCA TGCCACGGCA GATACGCAAGCGATG TERM 1935 1960631 - 1960619 - g 84 -4.8 -5.29445 | CCTGAACAAGAAAAA GCTC GCAAT GAGC GCACACTCGAACAGG Patl_1645 1959140 - 1961938 + | hypothetical protein TERM 1936 1962368 - 1962378 + G 72 -5.4 -4.5187 | opp_overlap 1962368 1962364 GGCCGATTAGACAAA CCTT CGG AAGG TTTAATTTTTTTGAC Patl_1646 1962017 - 1962970 + | pseudouridine synthase, Rsu TERM 1937 1963105 - 1963082 - T 100 -15.4 -5.64321 | opp_overlap 1963082 ACAACAAAAGAAAAA GACGAGAGTG GTGA CACTCTCGTC TTTTTTGTCTTGGGA TERM 1938 1963082 - 1963105 + T 100 -15.4 -5.47159 | opp_overlap 1963082 ACAACAAAAGAAAAA GACGAGAGTG GTGA CACTCTCGTC TTTTTTGTCTTGGGA Patl_1647 1964908 - 1963181 - | TrkA-C TERM 1939 1964832 - 1964860 + g 78 -12.6 -2.62983 | gap 1, opp_overlap 1964832 1964833 GCAAAAATTGAAGAA G-GGCGCTTATTC GTGA GAATAAGCGCCGC TAATGTACCGGTAAA TERM 1940 1964859 - 1964832 - G 95 -12.8 -3.85159 | opp_overlap 1964832, overlap 1964833 GCAAAAATTGAAGAA GGGCGCTTATTC GTGA GAATAAGCGCCG CTAATGTACCGGTAA TERM 1941 1964858 - 1964833 - G 93 -16.3 -2.90011 | opp_overlap 1964832, overlap 1964832 CAAAAATTGAAGAAG GGCGCTTATTC GTGA GAATAAGCGCC GCTAATGTACCGGTA TERM 1942 1964887 - 1964897 + g 71 -6.8 -4.07868 | opp_overlap 1964887 TAAATATTGCTAATA CCAG AAG CTGG TTTATGTCCATATAG Patl_1648 1966336 - 1964927 - | sulfate adenylyltransferase, large subunit TERM 1943 1965512 - 1965526 + g 89 -6.4 -5.37593 | overlap 1965499 GCCCGACGGAAGCGC GGTGAT CTT ATCGCC TTTTTTGATTTGGCC Patl_1649 1967127 - 1966339 - | 3'(2'),5'-bisphosphate nucleotidase Patl_1650 1967723 - 1967127 - | adenylylsulfate kinase TERM 1944 1967563 - 1967579 + g 95 -3 -5.93809 | gap 1, overlap 1967563 1967565 AGTAAGTAGGTGTGC TT-GCCG TTAT CGGCTAA TTTTTTTTCTAACAA Patl_1651 1968637 - 1967723 - | sulfate adenylyltransferase subunit 2 Patl_1652 1969989 - 1968769 - | diguanylate phosphodiesterase TERM 1945 1969647 - 1969663 + g 81 -3.6 -5.30616 | opp_overlap 1969647 GAACATAGTCATCAA GGGCAA CGATA TAGCCC TTTTTCTTTAGATCG Patl_1653 1971545 - 1970010 - | sodium/proline symporter Patl_1654 1971652 - 1972110 + | GCN5-related N-acetyltransferase TERM 1946 1972148 - 1972161 + T 86 -8.1 -4.84017 | opp_overlap 1972148 AGGGAGATAAAAAAA GGAGC ATAA GCTCC TTTTTCTCAAACATT TERM 1947 1972161 - 1972148 - T 100 -8.1 -5.72616 | opp_overlap 1972148 AGGGAGATAAAAAAA GGAGC ATAA GCTCC TTTTTCTCAAACATT Patl_1655 1972928 - 1972221 - | hypothetical protein Patl_1656 1973478 - 1972921 - | RNA polymerase sigma factor TERM 1948 1973239 - 1973218 - G 90 -13 -3.57144 | opp_overlap 1973216 CTGCTTACGTTCAAA GCGTCGGG CATTTT CCCGACGC AATATCGTAATCAAC Patl_1657 1975419 - 1973665 - | BatD protein TERM 1949 1974780 - 1974810 + g 70 -9.7 -3.05596 | opp_overlap 1974798 1974799 GGATAGTAAAGGTAC CGCTCTTTTGTGG AATAA CCGCAAAGGTGCG TTCAATCACCCGATA Patl_1658 1977367 - 1975424 - | TPR repeat-containing protein TERM 1950 1976781 - 1976795 + g 70 -10 -3.09516 | opp_overlap 1976771, overlap 1976793 CAAAATATTTCACCT TGCTGG TAA CCAGCA TTGCGTAATAGCGCG Patl_1659 1978391 - 1977360 - | von Willebrand factor, type A Patl_1660 1978887 - 1978384 - | hypothetical protein TERM 1951 1978814 - 1978801 - G 79 -2.3 -5.4588 | overlap 1978802 1978810 TAAAAGGATAAAAAA GGCGA CTAA CCACC AACCATAGGCCGGCG Patl_1661 1979855 - 1978884 - | hypothetical protein Patl_1662 1980823 - 1979867 - | ATPase TERM 1952 1980888 - 1980878 - H 75 -5.4 -4.67048 | GTACGGGAAAATAAA CTGT ATA ACAG ACAATGCTGTGTATA fadI 1981222 - 1982532 + | 3-ketoacyl-CoA thiolase fadJ 1982543 - 1984696 + | multifunctional fatty acid oxidation complex subunit alpha TERM 1953 1984727 - 1984744 + T 95 -8.4 -5.43866 | opp_overlap 1984726 1984727 ACTAGCCTTTGAAAG CCGAGC GGATTA GCTCGG TTTTTTTACGCCTTA TERM 1954 1984849 - 1984837 - T 100 -7.7 -5.65177 | opp_overlap 1984837 1984837 ACAGGCATAAAAAAA GAGAG TTC CTCTC TCTTTTTTTCTACTG TERM 1955 1984837 - 1984849 + T 80 -7.7 -4.47611 | opp_overlap 1984837, overlap 1984837 ACAGGCATAAAAAAA GAGAG TTC CTCTC TCTTTTTTTCTACTG TERM 1956 1984837 - 1984851 + T 93 -5.7 -5.67063 | opp_overlap 1984837, overlap 1984837 ACAGGCATAAAAAAA GAGAG TTCCT CTCTC TTTTTTTCTACTGAA TERM 1957 1985391 - 1985409 + T 90 -13.2 -2.54371 | opp_overlap 1985391 TAGTGGCTGAAAAAA GCTAAGGG GTA CCCTTAGC TACCTTGCAATAATT TERM 1958 1985409 - 1985391 - T 100 -13.2 -5.0133 | opp_overlap 1985391 TAGTGGCTGAAAAAA GCTAAGGG GTA CCCTTAGC TACCTTGCAATAATT Patl_1665 1989922 - 1985405 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1959 1989871 - 1989860 - G 73 -2.2 -5.14965 | overlap 1989867 AGCGGCATTAAAAAA GCCA AAAG TAGC GCTTACGAGCCACAG Patl_1666 1992949 - 1990112 - | peptidase M16-like TERM 1960 1991188 - 1991175 - G 79 -3.1 -5.30616 | overlap 1991176 GTATGCAAAGAAAAA CCACA TTGG TGTGA ATACAAATGATAATT Patl_1667 1993002 - 1993475 + | phosphohistidine phosphatase, SixA Patl_1668 1995054 - 1993765 - | hypothetical protein Patl_1669 1995946 - 1995158 - | cytochrome c assembly protein Patl_1670 1996180 - 1997556 + | signal recognition particle protein TERM 1961 1997589 - 1997608 + F 100 -7.9 -5.61824 | GCTTGCTGATACTGA TAGCCCA CATTGT TGGGCTA TTTTTTTGCATTTTA Patl_1671 1997673 - 1997945 + | transcriptional antiterminator, Rof TERM 1962 1998229 - 1998265 + G 73 -10.9 -2.75183 | opp_overlap 1998258, overlap 1998227 GTGGCGGTAGCGCAT TGCGAAGTTTCTGTCAG CCA CTGATAGAAGCAACGCA TAATTCGGTGCACCT Patl_1672 1998099 - 1999316 + | hypothetical protein Patl_1673 2000246 - 1999338 - | LysR family transcriptional regulator TERM 1963 1999609 - 1999592 - G 72 -9.1 -3.54424 | gap 1, opp_overlap 1999587 TTCCATTGTTTGAAA CCGCCACC TGT GG-GGCGG ATACGTCTTGCCATT Patl_1674 2000404 - 2001402 + | zinc-binding alcohol dehydrogenase TERM 1964 2001464 - 2001505 + T 93 -9.6 -5.10064 | gap 1, overlap 2001470 ATAGCATTCATTACT TTC-TATGCTGGCTGGAAA GTTAA TTTCCTGCCAGCTTATGAA TTTTTATGTGTTCAA TERM 1965 2001470 - 2001498 + T 95 -13.2 -3.57767 | overlap 2001464 TTCATTACTTTCTAT GCTGGCTGGAAA GTTAA TTTCCTGCCAGC TTATGAATTTTTATG Patl_1675 2002503 - 2001601 - | LysR family transcriptional regulator TERM 1966 2001815 - 2001785 - G 70 -5.2 -4.4727 | opp_overlap 2001790 2001790, overlap 2001774 2001789 TGAATAGGTAGAAAA CCCACGCCAATCCC GGC GGCCTGGGCTTGGG CTTTACTTTTCATGC TERM 1967 2002432 - 2002446 + g 73 -11.4 -2.5655 | overlap 2002431 TAACGCGTCTGCAGC GGCAGC AAA GCTGCC CTTGCTATGAATGGC TERM 1968 2002492 - 2002502 + g 76 -2.4 -5.28176 | GGCTTCAAGGGTAAC GGCG TGG CGCA TTTTTTCTCCATAAA TERM 1969 2002554 - 2002523 - R 93 -11.6 -4.13995 | opp_overlap 2002522 2002525 2002527, overlap 2002524 2002527 TCTCCATAAACGAAA GTCACCACCCTAAG CAAC CTTAGGGTGGTGTG GTTATAAATAGCACT TERM 1970 2002553 - 2002524 - R 100 -15.1 -3.07915 | opp_overlap 2002522 2002525 2002527, overlap 2002523 2002527 CTCCATAAACGAAAG TCACCACCCTAAG CAAC CTTAGGGTGGTGT GGTTATAAATAGCAC TERM 1971 2002525 - 2002552 + r 100 -18.6 -2.8474 | opp_overlap 2002524 2002523 2002527, overlap 2002522 2002527 TCCATAAACGAAAGT CACCACCCTAAG CAAC CTTAGGGTGGTG TGGTTATAAATAGCA TERM 1972 2002527 - 2002550 + r 100 -15.4 -2.97245 | opp_overlap 2002524 2002523 2002527, overlap 2002525 2002522 CATAAACGAAAGTCA CCACCCTAAG CAAC CTTAGGGTGG TGTGGTTATAAATAG TERM 1973 2002550 - 2002527 - R 95 -15.4 -2.74747 | opp_overlap 2002527 2002525 2002522, overlap 2002524 2002523 CATAAACGAAAGTCA CCACCCTAAG CAAC CTTAGGGTGG TGTGGTTATAAATAG Patl_1676 2003301 - 2002606 - | Pirin-like TERM 1974 2002882 - 2002902 + g 71 -3.3 -4.77036 | gap 1 GATAATGGGCGTCAG GCC-TTGG CGTCTA CCAAAGGC TTTTTGCTGGTAGCC Patl_1677 2003774 - 2003325 - | DoxX Patl_1679 2005926 - 2004547 - | peptidase M28 TERM 1975 2005799 - 2005809 + g 77 -6.8 -4.40237 | TGTTCGATATGTTCT GCAG AAA CTGC TTTTGCTATGTCGTG TERM 1976 2006069 - 2006049 - H 71 -4.1 -4.83615 | TATCGTCTATAAAAA CACAAAAAT GAC ATTTTTTTG AATCAACAATGTTAT TERM 1977 2008425 - 2008445 + G 76 -8.3 -4.09739 | opp_overlap 2008424 2008427 CATAACCTATCCAAG TACACCCGA TCC TCAGGTGTA TTTTCCCAAACTTGA TERM 1978 2008812 - 2008800 - g 71 -7.7 -3.84674 | overlap 2008797 AGGTTACGAGAATAA GACTG GCG CAGTC TCACGAGAAGAGCAC TERM 1979 2008871 - 2008881 + G 80 -6.8 -4.56597 | AGATGTATTTAGCGC GCTG GCA CAGC TTTTTAGAGCAAGAA Patl_1680 2006155 - 2010729 + | diguanylate cyclase/phosphodiesterase Patl_1681 2011472 - 2010852 - | hypothetical protein TERM 1980 2012635 - 2012616 - g 71 -10.8 -2.62933 | GAATGGTTTACATTA CTTGCCAT CATT ATGGCAAG AACCACCATGGCCGT Patl_1682 2011704 - 2013386 + | diguanylate cyclase Patl_1683 2013447 - 2014274 + | phytanoyl-CoA dioxygenase Patl_1684 2014558 - 2014283 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1981 2014324 - 2014357 + g 74 -3.9 -5.02074 | gap 1, overlap 2014327 GGTGGTAACCAAATT GAG-TTTTGACTGGTC CAT GTACGGTCAAAATCTC TTTTTTAAACACTAC Patl_1685 2014905 - 2015672 + | class II aldolase/adducin-like TERM 1982 2015649 - 2015659 + F 79 -6.8 -4.59773 | opp_overlap 2015649 2015648 CGTAAAGCTTACAAG CTCG ATC CGAG TTTTTGCGAATAACA Patl_1686 2015721 - 2016896 + | mandelate racemase/muconate lactonizing-like protein TERM 1983 2016956 - 2016915 - f 79 -8.9 -3.8917 | opp_overlap 2016912 2016916, overlap 2016917 2016920 TTGCAAGCATAATAA CA-TGAGCACTGTGCCACC AGTCGA GG-GGCACAGTGCTGAGTG ATTCAATATTCTCGT TERM 1984 2016953 - 2016917 - f 89 -11.7 -3.52995 | gap 1, opp_overlap 2016916 2016912, overlap 2016915 2016920 GCAAGCATAATAACA TGAGCACTGTGCCACC AGTCGA GG-GGCACAGTGCTGA GTGATTCAATATTCT TERM 1985 2016950 - 2016920 - f 90 -13.4 -2.88645 | gap 1, opp_overlap 2016916 2016912, overlap 2016917 2016915 AGCATAATAACATGA GCACTGTGCCACC AGTCGA GG-GGCACAGTGC TGAGTGATTCAATAT Patl_1687 2017199 - 2018521 + | twin-arginine translocation pathway signal TERM 1986 2018581 - 2018604 + T 100 -14 -4.29845 | opp_overlap 2018581 TAAAAGCAAAAAAAA GGGGATGATA TAAA TATCATCCCC TTTTCGCTTCCCTTG TERM 1987 2018604 - 2018581 - T 100 -14 -6.07969 | opp_overlap 2018581 TAAAAGCAAAAAAAA GGGGATGATA TAAA TATCATCCCC TTTTCGCTTCCCTTG Patl_1688 2020881 - 2018626 - | acyl-CoA dehydrogenase TERM 1988 2020337 - 2020323 - G 71 -10 -3.28712 | TTTCTTTGGTCACAA TCCCTG TAT CAGGGA TAGCACCCGCATCTG TERM 1989 2020499 - 2020511 + g 71 -3.3 -4.74801 | ACCATGACGGTTACC GCAAC CGC GCTGC TTTTTACTGCAATTG Patl_1689 2021947 - 2021162 - | peptidase M23B Patl_1690 2022245 - 2022691 + | MaoC-like dehydratase TERM 1990 2023819 - 2023834 + G 83 -9 -4.30396 | CCTGGCACTGTGCCT GGCCTA GATG TAGGCC TTTGTATGTTTGATT Patl_1691 2022973 - 2025657 + | TonB-dependent receptor TERM 1991 2025693 - 2025680 - f 93 -8.1 -5.38951 | opp_overlap 2025680 AATTTATATAAAAAA CCTGC TTCG GCAGG TTTTTTTGTTTCACT TERM 1992 2025680 - 2025693 + F 100 -8.1 -5.96894 | opp_overlap 2025680 AATTTATATAAAAAA CCTGC TTCG GCAGG TTTTTTTGTTTCACT Patl_1692 2025808 - 2026137 + | transcriptional coactivator/pterin dehydratase TERM 1993 2026465 - 2026505 + F 100 -12.1 -5.02201 | gap 1, opp_overlap 2026451 2026470 2026476, overlap 2026470 2026476 AGTGGACTAGGGTCC AGA-AACAAAAAGCCCCG CTTGTA CGGGGCTTTTTGTTATCC TTTTTATCCTGTTTT TERM 1994 2026470 - 2026499 + F 100 -16.6 -3.78785 | opp_overlap 2026470 2026476, overlap 2026465 2026476 ACTAGGGTCCAGAAA CAAAAAGCCCCG CTTGTA CGGGGCTTTTTG TTATCCTTTTTATCC TERM 1995 2026499 - 2026470 - f 100 -17.3 -3.87075 | opp_overlap 2026470 2026465 2026476, overlap 2026476 ACTAGGGTCCAGAAA CAAAAAGCCCCGC TTGT ACGGGGCTTTTTG TTATCCTTTTTATCC TERM 1996 2026476 - 2026493 + F 100 -9.8 -5.25772 | opp_overlap 2026476 2026470, overlap 2026470 2026465 GTCCAGAAACAAAAA GCCCCG CTTGTA CGGGGC TTTTTGTTATCCTTT TERM 1997 2026493 - 2026476 - f 100 -10.5 -5.38054 | opp_overlap 2026470 2026465 2026476, overlap 2026470 GTCCAGAAACAAAAA GCCCCGC TTGT ACGGGGC TTTTTGTTATCCTTT TERM 1998 2026532 - 2026544 + F 100 -6.9 -5.54079 | TTTTTAATTTATTCT GGGCT TAT GGCCC TTTTTTCGTTTTTGG Patl_1693 2026570 - 2027028 + | hypothetical protein Patl_1694 2027077 - 2028570 + | NusA antitermination factor TERM 1999 2029231 - 2029218 - g 70 -2.3 -5.09173 | GAAGATGCGAAAAAA GCTGC TGAT GAAGC GCGCAAACTTGCTGA TERM 2000 2030576 - 2030561 - g 72 -6.2 -4.24404 | overlap 2030547 2030564 AGCGAAACTTGAAAA CATGTT CGCG AACATG GAAGCAGGTGATGTT Patl_1695 2028594 - 2031203 + | translation initiation factor IF-2 TERM 2001 2031244 - 2031271 + F 100 -15 -3.01791 | opp_overlap 2031249, overlap 2031249 TTATTAGTATTGAAT TAAAACGGAGGC TTAG GCCTCCGTTTTG TCTTAACAAAAGCAT TERM 2002 2031249 - 2031266 + F 100 -12.7 -4.66537 | opp_overlap 2031249, overlap 2031244 AGTATTGAATTAAAA CGGAGGC TTAG GCCTCCG TTTTGTCTTAACAAA TERM 2003 2031266 - 2031249 - f 100 -12.7 -4.43879 | opp_overlap 2031249 2031244 AGTATTGAATTAAAA CGGAGGC TTAG GCCTCCG TTTTGTCTTAACAAA Patl_1696 2031311 - 2031727 + | ribosome-binding factor A TERM 2004 2031873 - 2031898 + G 70 -9 -3.40597 | overlap 2031872 CTGGCGCACTGGATC CACTGGCTAC CGGGAT GTTGCCAGTG TGTTTAGGTGAAGCC Patl_1697 2031731 - 2032684 + | tRNA pseudouridine synthase B Patl_1698 2032794 - 2033063 + | ribosomal protein S15 TERM 2005 2033083 - 2033113 + T 72 -8.5 -3.53343 | gap 1, opp_overlap 2033092, overlap 2033084 2033092 ACAGCTTATTGCGTT TGAAAGAAAGCACC TTCG GGTGCTTT-TTTCG TTTAAGGAGAAAATT TERM 2006 2033084 - 2033112 + T 70 -9.8 -2.71791 | gap 1, opp_overlap 2033092, overlap 2033083 2033092 CAGCTTATTGCGTTT GAAAGAAAGCACC TTCG GGTGCTTT-TTTC GTTTAAGGAGAAAAT TERM 2007 2033105 - 2033092 - T 80 -8.1 -4.41348 | opp_overlap 2033084 2033083 2033092 TGCGTTTGAAAGAAA GCACC TTCG GGTGC TTTTTTCGTTTAAGG TERM 2008 2033092 - 2033105 + T 93 -8.1 -5.37593 | opp_overlap 2033092, overlap 2033084 2033083 TGCGTTTGAAAGAAA GCACC TTCG GGTGC TTTTTTCGTTTAAGG Patl_1699 2033632 - 2033252 - | hypothetical protein Patl_1700 2033850 - 2033632 - | hypothetical protein Patl_1701 2035639 - 2033843 - | ABC transporter related Patl_1702 2036775 - 2035663 - | diguanylate cyclase Patl_1703 2037391 - 2036798 - | hypothetical protein Patl_1704 2039057 - 2037393 - | hypothetical protein TERM 2009 2038472 - 2038452 - G 84 -10.5 -3.85698 | opp_overlap 2038452 TGGCGCTTGTATAAA CGTGTTGTA GTA CACAACACG TTCTTCGAAGTTAAA TERM 2010 2038452 - 2038472 + g 75 -9.8 -3.65314 | opp_overlap 2038452 TGGCGCTTGTATAAA CGTGTTGT AGTAC ACAACACG TTCTTCGAAGTTAAA Patl_1705 2040268 - 2039060 - | PqiA family integral membrane protein TERM 2011 2039785 - 2039797 + g 100 -9.1 -5.00616 | opp_overlap 2039783 TTTTGAGTAAAACGG CCGCA TGT TGCGG TTTTTTACCAAACAG TERM 2012 2040797 - 2040820 + G 75 -6.1 -4.4078 | gap 1, opp_overlap 2040783 2040811, overlap 2040797 2040798 ACAGGCATCGGATGG C-CTGCTTGA ACAGA TCAAGCAGCG TTTTGCTTAAGGGAA Patl_1706 2040339 - 2040830 + | protein tyrosine phosphatase Patl_1707 2041131 - 2042474 + | phospho-2-dehydro-3-deoxyheptonate aldolase Patl_1708 2042540 - 2042791 + | hypothetical protein TERM 2013 2042767 - 2042783 + F 71 -5.1 -4.49531 | overlap 2042742 AAGTATTGCTGATAA GGTTGCT ATC AGTAGCC TTTCTTAATTTTCTT TERM 2014 2044068 - 2044081 + G 76 -2.3 -5.34555 | GTGGGCTTTTAAGCC TGCAG GGAA CGGCA TTTTTTGTACTCTAC Patl_1709 2042867 - 2044723 + | ferrous iron transport protein B TERM 2015 2044777 - 2044742 - T 71 -9.8 -2.84171 | gap 1, overlap 2044739 2044738 AGCGTCAAAAATTTA GTAGCCTCAGGTGT-AT GAA ATAACGCCTGAGGCTTC CGACTGAGAATGTAG Patl_1710 2045271 - 2044795 - | hypothetical protein TERM 2016 2045073 - 2045051 - G 93 -10.7 -4.63218 | opp_overlap 2045049 CTGCGCTGAATAAAA GGCTTTAAC TTAAC GTTAAAGCC AATGTGCTTCAAAGC Patl_1711 2045622 - 2045807 + | hypothetical protein TERM 2017 2045817 - 2045840 + T 83 -12.6 -2.75064 | opp_overlap 2045813 2045812 2045808, overlap 2045814 ACCTAATCAACGTTT GCTTATACAG CTGT CTGTATAAGC TACTTGAATCCAAAA TERM 2018 2045885 - 2045859 - T 100 -9.5 -5.53288 | opp_overlap 2045859 TTGAATCCAAAAAAA GCCTGGATCAT GTTAT ATGATTCAGGC TTTTTTTGTGGCTAG TERM 2019 2045859 - 2045885 + T 100 -12.4 -5.64274 | opp_overlap 2045859 TTGAATCCAAAAAAA GCCTGGATCATG TTA TATGATTCAGGC TTTTTTTGTGGCTAG Patl_1712 2047484 - 2045922 - | ABC transporter related TERM 2020 2046555 - 2046567 + g 83 -6.3 -5.01811 | CGTTAACTCTAATGC GTTAC GGT GTAAC TTTTTCGTTTGCTCG TERM 2021 2046711 - 2046731 + g 86 -5.3 -5.4756 | opp_overlap 2046712, overlap 2046712 GCGGCTAACAAAGGT ACGCAGTTC AGC GATCTGCGC TTTTTTCTTAGCGTT TERM 2022 2046712 - 2046730 + g 77 -8.8 -3.86909 | opp_overlap 2046712, overlap 2046711 CGGCTAACAAAGGTA CGCAGTTC AGC GATCTGCG CTTTTTTCTTAGCGT Patl_1713 2048307 - 2047951 - | SmpA/OmlA Patl_1714 2050094 - 2048421 - | DNA repair protein RecN Patl_1715 2051062 - 2050187 - | NAD(+) kinase TERM 2023 2051456 - 2051444 - g 72 -4.8 -4.70739 | CAAAAACAACTAAAA GAGC TCATT GCTC AAATTCGATTGGCAG Patl_1716 2051327 - 2052325 + | beta-hexosaminidase TERM 2024 2052533 - 2052553 + G 71 -9.7 -3.21912 | opp_overlap 2052531, overlap 2052536 CACAGGTCGAATACT TACCGGCAG TGA CTGCCGCTA TTACTGCATTAACGG TERM 2025 2052536 - 2052550 + G 73 -11.4 -2.5007 | opp_overlap 2052531, overlap 2052533 AGGTCGAATACTTAC CGGCAG TGA CTGCCG CTATTACTGCATTAA Patl_1717 2052442 - 2053818 + | anion transporter TERM 2026 2054279 - 2054267 - g 72 -4.8 -4.65078 | overlap 2054253 ACACGTGTAATAAAA CAGG TGAAG CCTG CGCAATTGTATCAGG Patl_1718 2054086 - 2054412 + | hypothetical protein Patl_1719 2055457 - 2054459 - | LysR family transcriptional regulator TERM 2027 2055767 - 2055785 + H 70 -8.2 -3.69408 | overlap 2055768 AAAAAAATATGGGGC TGCACAAT ACT ATTGTGCG TTCTGTCATTTGTTT TERM 2028 2055768 - 2055784 + H 71 -9.5 -2.80018 | overlap 2055767 AAAAAATATGGGGCT GCACAAT ACT ATTGTGC GTTCTGTCATTTGTT Patl_1720 2055873 - 2057462 + | twin-arginine translocation pathway signal Patl_1721 2057452 - 2058066 + | cytochrome c, class I Patl_1722 2058085 - 2058597 + | endoribonuclease L-PSP TERM 2029 2059562 - 2059574 + G 71 -3.3 -4.87803 | GGACAACCCAATACC TCCGC AAC GCGTA TTTTCTTTAACAGTG Patl_1723 2058701 - 2061307 + | TonB-dependent receptor TERM 2030 2061357 - 2061384 + T 87 -12.8 -3.30106 | opp_overlap 2061362, overlap 2061362 AGTATTCGTTCATAA AAAAAGCGGCTC AAAT GAGCCGCTTTTG TGTGTTTACGTTACA TERM 2031 2061362 - 2061379 + T 100 -12.7 -4.74013 | opp_overlap 2061362, overlap 2061357 TCGTTCATAAAAAAA GCGGCTC AAAT GAGCCGC TTTTGTGTGTTTACG TERM 2032 2061379 - 2061362 - T 100 -12.7 -5.60993 | opp_overlap 2061362 2061357 TCGTTCATAAAAAAA GCGGCTC AAAT GAGCCGC TTTTGTGTGTTTACG Patl_1724 2062829 - 2061402 - | hypothetical protein Patl_1725 2066311 - 2062829 - | transcription-repair coupling factor TERM 2033 2065186 - 2065198 + g 71 -3.3 -4.84219 | overlap 2065187 CCCGCTGCTTAAGCG TTGCC CAG GGCAC TTTGTTTTGTGATTT TERM 2034 2065235 - 2065261 + g 73 -4.3 -4.81083 | GATATCACCAATCGT GCGGGTGTCGT AATTG GTGACGCCGGC TTTTTGCTCCTTGGC Patl_1726 2066913 - 2066317 - | hypothetical protein TERM 2035 2066819 - 2066829 + g 72 -8.2 -3.66178 | opp_overlap 2066819 2066816 GGCAAGGTAAAGCCA GCCG CAA CGGC TTTAAAGTTAACCCG TERM 2036 2067929 - 2067942 + G 72 -5.9 -4.40963 | overlap 2067930 ATAAGGTCAGCCGTA TCGCG CAAA CGCGG TTATTTTTGCAAGAT Patl_1727 2067274 - 2068485 + | LolC/E family lipoprotein releasing system, transmembrane protein TERM 2037 2069076 - 2069062 - g 85 -6.4 -5.093 | opp_overlap 2069068 CGCAAAACAATAAAA CTGACA TAG TGCCAG ACTACTTTGTACACG Patl_1728 2068641 - 2069198 + | putative hypoxanthine phosphoribosyltransferase TERM 2038 2069236 - 2069251 + T 100 -6.1 -6.04378 | opp_overlap 2069236 AAGCGGATTGAAAAA GGAGC CTAGTT GCTCC TTTTTTTTGTGGTTT TERM 2039 2069251 - 2069236 - T 80 -6.1 -4.67011 | opp_overlap 2069236 AAGCGGATTGAAAAA GGAGC CTAGTT GCTCC TTTTTTTTGTGGTTT Patl_1729 2069965 - 2069432 - | YHS Patl_1730 2070330 - 2070836 + | hypothetical protein Patl_1731 2071100 - 2071297 + | CsbD-like TERM 2040 2071362 - 2071335 - f 90 -12.8 -3.70438 | opp_overlap 2071335 AAATTACCATTGAAA GCGTGTGAAGAA CTGT TTCTTCACGCGC TTTTTCTTTTTCACT TERM 2041 2071335 - 2071362 + F 100 -15 -5.63236 | opp_overlap 2071335 AAATTACCATTGAAA GCGTGTGAAGAA CTGT TTCTTCACGCGC TTTTTCTTTTTCACT Patl_1732 2071648 - 2071809 + | hypothetical protein TERM 2042 2071829 - 2071846 + T 100 -8.4 -5.85178 | CTTAATTCATGATCA GGCTGC CAATGC GCAGCC TTTTTTTTGAGTATT TERM 2043 2072235 - 2072210 - T 87 -6.1 -5.32396 | opp_overlap 2072212, overlap 2072212 ACATTAAAAACAAAA TAGGCTCTTCA TTTC TGACGAGCCTT TTTATCAAGATGTTT TERM 2044 2072233 - 2072212 - T 82 -8.7 -4.26857 | opp_overlap 2072212, overlap 2072210 ATTAAAAACAAAATA GGCTCTTCA TTTC TGACGAGCC TTTTTATCAAGATGT TERM 2045 2072212 - 2072233 + T 90 -8.7 -4.84761 | opp_overlap 2072212 2072210 ATTAAAAACAAAATA GGCTCTTCA TTTC TGACGAGCC TTTTTATCAAGATGT Patl_1733 2072969 - 2072358 - | hypothetical protein Patl_1734 2073967 - 2072951 - | hypothetical protein Patl_1735 2075169 - 2074186 - | hypothetical protein TERM 2046 2075591 - 2075572 - H 100 -7.2 -5.72622 | opp_overlap 2075572 CCCAGAAACAAAAAA GCTCTTCA TTTC TGAAGAAC CTTCTCATCGCGATG TERM 2047 2076704 - 2076655 - g 77 -8.8 -3.89215 | opp_overlap 2076661 GTTGATAAATGTAAA TTGTTTGGCAGTTTAGGGCTGT CTATTC ACAACCCCAAAGTACAAAACAA GCGACTCTGCACAGC Patl_1736 2076094 - 2077383 + | hypothetical protein Patl_1737 2077666 - 2078073 + | hypothetical protein TERM 2048 2078299 - 2078320 + F 100 -13.1 -4.26344 | opp_overlap 2078299 CCAAAAACAAAAAAA GGCTCTTCA TTTC TGAAGAGCC TTTTCATCGCGATGT TERM 2049 2078320 - 2078299 - f 100 -13.1 -6.20267 | opp_overlap 2078299 CCAAAAACAAAAAAA GGCTCTTCA TTTC TGAAGAGCC TTTTCATCGCGATGT Patl_1738 2079168 - 2079488 + | hypothetical protein TERM 2050 2079522 - 2079509 - T 89 -9.5 -4.20783 | opp_overlap 2079508 2079509 AGCTGAGTTAACAAA GGCGC TGTT GCGCC CTTTATGACAATGAA TERM 2051 2079509 - 2079522 + T 72 -9.5 -2.92475 | opp_overlap 2079509, overlap 2079508 AGCTGAGTTAACAAA GGCGC TGTT GCGCC CTTTATGACAATGAA smpB 2080122 - 2079646 - | SsrA-binding protein TERM 2052 2080595 - 2080611 + G 73 -4.3 -4.74801 | opp_overlap 2080597 2080598, overlap 2080597 2080598 GAGTCGCTTAGTGGA AATGGCC TTT GGCCGTG TTTTTAATGCGATTG Patl_1740 2080248 - 2080679 + | cyclase/dehydrase Patl_1741 2080676 - 2081002 + | hypothetical protein Patl_1742 2081726 - 2081043 - | hypothetical protein Patl_1743 2082736 - 2081924 - | hypothetical protein TERM 2053 2084247 - 2084268 + G 74 -10.9 -2.78216 | gap 1, overlap 2084245 ATTCCGGCTGTTGTC GG-CTGTGGC AAC GCCACAGACC TGATTAATAACGGTG Patl_1744 2082948 - 2085323 + | phosphoenolpyruvate synthase TERM 2054 2085386 - 2085403 + T 100 -11.3 -5.82388 | opp_overlap 2085386 CCCTACAGGTAAAAA GGCTGTC ATGA GACAGCC TTTTTTTTGGACTTT TERM 2055 2085403 - 2085386 - T 95 -11.3 -4.70659 | opp_overlap 2085386 CCCTACAGGTAAAAA GGCTGTC ATGA GACAGCC TTTTTTTTGGACTTT Patl_1745 2085739 - 2085491 - | hypothetical protein TERM 2056 2087957 - 2087917 - g 82 -11.3 -3.6279 | opp_overlap 2087917 AAAGCGCTTGAATAA CTCTATGGGAAAAGCCC AATCTAA GGACTTTTCCCATGAAG TGTTAGAAGTGATGG TERM 2057 2088495 - 2088479 - g 87 -10.9 -3.90744 | GGTTTCTTGAAAGAA TTTGCCG CGA CGGCAAA AGACAGTGCAGACTT TERM 2058 2088678 - 2088657 - g 73 -9.5 -3.36175 | overlap 2088674 AATGGCTAGCGACAA TTACCTTGC CCGA GCAAGGCAA CACGCCTGATACCGA Patl_1746 2085974 - 2089015 + | FAD linked oxidase-like TERM 2059 2089146 - 2089170 + T 100 -10.1 -5.24129 | opp_overlap 2089146 ATGATGTTAAAATAA GCAGTAAATAC TCA GTATTGACTGC TTTTTTGTAAGCAAA TERM 2060 2089170 - 2089146 - T 89 -10.1 -4.20148 | opp_overlap 2089146 ATGATGTTAAAATAA GCAGTAAATAC TCA GTATTGACTGC TTTTTTGTAAGCAAA Patl_1747 2090642 - 2089239 - | RNA-metabolising metallo-beta-lactamase TERM 2061 2092308 - 2092290 - g 80 -13.2 -2.54896 | opp_overlap 2092286 2092286, overlap 2092286 CGGCCACTCAACCCA GCAGACGA ACG TCGTCTGC AAGAGTTCTTCTATT Patl_1748 2090904 - 2092739 + | acetyl-CoA hydrolase/transferase TERM 2062 2093129 - 2093149 + G 81 -5.3 -5.2112 | CACCACGCCGAGCAT GCCAAAGCC ATG GGCTTCTGC TTTTTTAATAATATT Patl_1749 2092742 - 2093659 + | histone deacetylase superfamily protein Patl_1750 2095769 - 2093787 - | PAS/PAC sensor hybrid histidine kinase Patl_1751 2096116 - 2096619 + | hypothetical protein TERM 2063 2096717 - 2096694 - T 90 -8.9 -5.1485 | gap 1, opp_overlap 2096694 TAACTAATATAAAAA GCCAG-AGGG AGAGG CCCTTCTGGC TAGTATGCGCAGTGC TERM 2064 2096694 - 2096717 + T 72 -10.3 -2.62616 | opp_overlap 2096694 TAACTAATATAAAAA GCCAGAGGG AGAGGC CCTTCTGGC TAGTATGCGCAGTGC TERM 2065 2096721 - 2096737 + T 80 -6.5 -4.67942 | overlap 2096724 GGCCCTTCTGGCTAG TATGCGC AGT GCGCCTA TTTTGCTTTCTTAAG TERM 2066 2096783 - 2096793 + T 70 -5.4 -4.35926 | CTTCACTTTGCTTTC TTGC TTA GCAA TTTTAGCTTTGCGGT Patl_1752 2097086 - 2096910 - | hypothetical protein Patl_1753 2097332 - 2098333 + | NADPH:quinone reductase Patl_1754 2098564 - 2099724 + | hypothetical protein TERM 2067 2099803 - 2099765 - f 100 -16.8 -4.16016 | opp_overlap 2099767, overlap 2099767 CCAGTGCGGAACAAA TAGCGCCATGCTCACTCT GAC AGTGTGAACATGGCGCTT TTTTATTGCTCGCGC TERM 2068 2099767 - 2099801 + F 100 -17.2 -5.5112 | opp_overlap 2099765 2099767 AGTGCGGAACAAATA GCGCCATGCTCACTCT GAC AGTGTGAACATGGCGC TTTTTTATTGCTCGC TERM 2069 2099801 - 2099767 - f 100 -19.4 -3.67877 | opp_overlap 2099767, overlap 2099765 AGTGCGGAACAAATA GCGCCATGCTCACTCT GAC AGTGTGAACATGGCGC TTTTTTATTGCTCGC Patl_1755 2099975 - 2100631 + | redoxin TERM 2070 2100826 - 2100856 + F 75 -10.5 -3.19442 | TAAACAGTATTTTTG CTACACTTGGGCA TCAAT TTCCCGAGTGTAG TTAGCTATGTTGCAT TERM 2071 2102407 - 2102385 - g 82 -7.6 -4.66938 | overlap 2102387 ATGGCCAAGATAAAA CACGCTGGGC ATT GCCCAACGAA CCGCAAAATACCTGG TERM 2072 2102405 - 2102387 - g 95 -12.4 -3.94773 | overlap 2102385 GGCCAAGATAAAACA CGCTGGGC ATT GCCCAACG AACCGCAAAATACCT Patl_1756 2100863 - 2104363 + | exodeoxyribonuclease V, gamma subunit TERM 2073 2104542 - 2104530 - g 74 -10.5 -3.15544 | CGTGACCTTTACTAA CGCCG CGA CGGCG GAACTAAAACAGCGC TERM 2074 2105245 - 2105219 - g 72 -5.1 -4.71426 | opp_overlap 2105220, overlap 2105220 GCGCGATGAAGAAAA CGTCTAAGAGC TTAGC GCACTTAGACT TCTCCCGTTTTGAAA Patl_1757 2104360 - 2108322 + | exodeoxyribonuclease V, beta subunit Patl_1758 2108316 - 2110529 + | exodeoxyribonuclease V, alpha subunit Patl_1759 2115323 - 2110518 - | hypothetical protein TERM 2075 2112940 - 2112924 - G 81 -5 -5.24129 | overlap 2112925 GGGTCGTACAAAAAA GCGGCC TGCTT GGCCGT GATAAAACCCATCGA TERM 2076 2112939 - 2112925 - G 72 -8.5 -3.73995 | overlap 2112924 GGTCGTACAAAAAAG CGGCC TGCTT GGCCG TGATAAAACCCATCG TERM 2077 2114120 - 2114130 + g 72 -5.4 -4.42386 | overlap 2114112 2114114 GGTCTTTGTCGTAGC GTAC AAC GTAC TTTTGTAAATAAGCC TERM 2078 2114491 - 2114507 + g 86 -10.9 -3.83502 | TGGCTACTGTAACTT GGCAAAG GGA CTTTGCC TTTAATATCAGCCTC TERM 2079 2114807 - 2114817 + g 72 -8.2 -3.75193 | TCACGTTTGCGCTAT CGCC CAA GGCG TTTGAGTCTGTAATT Patl_1760 2115488 - 2115880 + | hypothetical protein Patl_1761 2116000 - 2116494 + | putative orphan protein Patl_1762 2116612 - 2118330 + | SufS subfamily cysteine desulfurase Patl_1763 2118938 - 2118399 - | isochorismatase hydrolase TERM 2080 2119843 - 2119789 - g 76 -8.5 -4.18762 | gap 1, opp_overlap 2119799, overlap 2119791 AATGCTCAGCTAAAA GACTCACCTTCGGCTCAGGCGTATCG TATG CGTTAC-CCTGAACCGCAAGCGCGAC GTAAACCAGCAGTGA TERM 2081 2119841 - 2119791 - g 79 -9.7 -3.69216 | gap 1, opp_overlap 2119799, overlap 2119789 TGCTCAGCTAAAAGA CTCACCTTCGGCTCAGGCGTATCG TATG CGTTAC-CCTGAACCGCAAGCGCG ACGTAAACCAGCAGT Patl_1764 2119189 - 2120223 + | putative purine nucleoside permease protein Patl_1765 2120515 - 2120291 - | hypothetical protein Patl_1766 2120761 - 2121393 + | hypothetical protein Patl_1767 2121393 - 2122112 + | hypothetical protein Patl_1768 2122454 - 2122155 - | hypothetical protein Patl_1769 2123942 - 2122548 - | diguanylate cyclase TERM 2082 2123694 - 2123673 - G 88 -5.9 -5.45652 | ACTGGCAACAAAAAA GTCCATG TTGTAGTC CATGGAC ATACGCTTGACTAAA Patl_1770 2125366 - 2124107 - | putative glycosyltransferase TERM 2083 2124930 - 2124954 + g 71 -7.1 -4.15854 | opp_overlap 2124907 CAGCGGTATATGGAT GCGATTTCACG TAA CGCCAAATCGC TTTTAAGATCGCTTT Patl_1771 2126459 - 2125371 - | diguanylate cyclase Patl_1772 2126733 - 2127800 + | 2-dehydropantoate 2-reductase TERM 2084 2127783 - 2127808 + T 72 -9.1 -3.31854 | opp_overlap 2127780 2127781, overlap 2127776 TCCCAGTTACAACGG CTAATTCGCCA GCAC TGACGAATTAG TGTTGATTGTCGTTG Patl_1773 2128539 - 2127805 - | hypothetical protein TERM 2085 2131824 - 2131797 - g 74 -5.6 -4.59993 | opp_overlap 2131803, overlap 2131798 2131815 2131816 AAATTGACAAAGAAA CCAGAAGTCGCT TTAA AACGACTTTTGA TCAAGTCAATAATGG Patl_1774 2128778 - 2132272 + | chromosome segregation protein SMC Patl_1775 2132297 - 2133631 + | cell division protein ZipA TERM 2086 2133635 - 2133654 + F 86 -7.8 -4.92385 | overlap 2133637 ATACACCGTTAATTT TGGGGAGC GCCT GCTCCCTG TTTTCTTTGAATATC TERM 2087 2133637 - 2133652 + F 86 -10.4 -4.07285 | overlap 2133635 ACACCGTTAATTTTG GGGAGC GCCT GCTCCC TGTTTTCTTTGAATA Patl_1776 2133682 - 2135715 + | DNA ligase, NAD-dependent Patl_1777 2135719 - 2136057 + | hypothetical protein TERM 2088 2136106 - 2136087 - T 70 -7.8 -3.64703 | opp_overlap 2136088, overlap 2136088 GTCTCTTGAGTTAAA GCCAGCCT ACTA AGGCTGGT TTTTTTGCTTTATTA TERM 2089 2136088 - 2136105 + T 100 -11.3 -5.77856 | opp_overlap 2136087 2136088 TCTCTTGAGTTAAAG CCAGCCT ACTA AGGCTGG TTTTTTTGCTTTATT TERM 2090 2136105 - 2136088 - T 80 -11.3 -2.78679 | opp_overlap 2136088, overlap 2136087 TCTCTTGAGTTAAAG CCAGCCT ACTA AGGCTGG TTTTTTTGCTTTATT Patl_1778 2136661 - 2136119 - | hypothetical protein TERM 2091 2138186 - 2138205 + G 71 -7 -4.06491 | opp_overlap 2138184, overlap 2138184 AAGGGGGCTAATACC GCGCCTGC TAGC GCTGGTGC TTTGTATACCATTAC Patl_1779 2136711 - 2138999 + | DNA internalization-related competence protein ComEC/Rec2 Patl_1780 2139095 - 2140852 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Patl_1781 2140915 - 2141832 + | tetraacyldisaccharide 4'-kinase Patl_1782 2141841 - 2142044 + | hypothetical protein Patl_1783 2142057 - 2142821 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase TERM 2092 2142935 - 2142903 - g 79 -2.7 -5.40072 | opp_overlap 2142909, overlap 2142905 2142909 GCGCCCTTAAAAAAA TAGAATTGGGCGT TTTCCCT ACGCCCATTCATA AATTAGCCCGTTTAT TERM 2093 2142932 - 2142905 - g 72 -6.4 -4.34482 | gap 1, opp_overlap 2142909, overlap 2142903 2142909 GCCCTTAAAAAAATA GAATTGGGCGT TTTCCCT ACGCCCA-TTC ATAAATTAGCCCGTT Patl_1784 2142878 - 2143876 + | D-cysteine desulfhydrase Patl_1785 2144035 - 2145813 + | diguanylate cyclase Patl_1786 2145818 - 2146246 + | GCN5-related N-acetyltransferase Patl_1787 2146266 - 2146766 + | hypothetical protein TERM 2094 2146893 - 2146920 + T 100 -17.1 -3.0782 | opp_overlap 2146893, overlap 2146881 ATTTGAATGGTTAAA CTGCTTCGGCG GGCGGG CGCCGAAGCAG TGTATTAACACATTA TERM 2095 2146920 - 2146893 - T 100 -17.1 -3.60971 | opp_overlap 2146893 2146881 ATTTGAATGGTTAAA CTGCTTCGGCG GGCGGG CGCCGAAGCAG TGTATTAACACATTA Patl_1788 2147346 - 2146933 - | hypothetical protein Patl_1789 2148311 - 2147370 - | LysR family transcriptional regulator TERM 2096 2148104 - 2148134 + g 71 -6.9 -4.17089 | gap 1, overlap 2148094 GGCGAGAGCGACGCA GCATGACTTCACCG GCTT CGGTGAGGA-ATGC TTTTCGCCCTTTAAC Patl_1790 2148436 - 2149173 + | hypothetical protein Patl_1791 2149989 - 2149198 - | UBA/THIF-type NAD/FAD binding fold TERM 2097 2150133 - 2150161 + H 72 -3.1 -5.04385 | opp_overlap 2150136, overlap 2150136 GATAATTGCTGAGTA CAACGCTTAATAA ACG TTAAAAAGCGTGG TTTTTTAAGCATATA Patl_1792 2150274 - 2151695 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2098 2152644 - 2152633 - g 71 -3.6 -4.82901 | overlap 2152635 GCCTTTTTAGAAAAA GACC CTGG GGCC AAAATTATTTACGAT Patl_1793 2151724 - 2153169 + | phosphomannomutase TERM 2099 2153206 - 2153182 - T 73 -5.7 -4.49314 | TAGCATTAAAAATAA TAGGCAGTGAC GAC GTTATTGCCTA AAGCCACATAAAAAA TERM 2100 2153253 - 2153210 - T 81 -12 -2.73124 | opp_overlap 2153223, overlap 2153223 CGTTATTGCCTAAAG CCACATAAAAAAATAGCGCC AATT GGCGCTATTTTTTTATTCAA TTATCAACATTATTT TERM 2101 2153240 - 2153223 - T 100 -11.3 -5.72616 | opp_overlap 2153223, overlap 2153210 AGCCACATAAAAAAA TAGCGCC AATT GGCGCTA TTTTTTTATTCAATT TERM 2102 2153223 - 2153240 + T 100 -11.3 -5.83226 | opp_overlap 2153223 2153210 AGCCACATAAAAAAA TAGCGCC AATT GGCGCTA TTTTTTTATTCAATT Patl_1794 2154543 - 2153263 - | citrate synthase I TERM 2103 2154914 - 2154890 - H 72 -10.1 -2.53263 | TGTATCTTTAAGCGA TTGGTAAGGTG CAA CACATTACCAA ACAATGACTAGACAA Patl_1795 2154956 - 2155330 + | succinate dehydrogenase, cytochrome b subunit Patl_1796 2155324 - 2155671 + | putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhC TERM 2104 2155968 - 2155985 + G 76 -4.1 -5.04325 | opp_overlap 2155968 AGCCATTATCGAAAT GGAAAAC ATGG GTTTGCC TTTTTCTCGTTTCGA sdhA 2155672 - 2157441 + | succinate dehydrogenase flavoprotein subunit TERM 2105 2157674 - 2157688 + G 89 -11.4 -4.06491 | CGGTAAAAACGGTTT GGCGTG CAT CACGCC TTTGTCTGCCCTTGG TERM 2106 2157813 - 2157799 - g 79 -4.3 -5.1861 | overlap 2157803 CCCAGTACGAAAAAA TCAAG CCGTT CTTGA TTAACGACAACAATC Patl_1798 2157456 - 2158166 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 2107 2158234 - 2158211 - f 70 -8.2 -3.62859 | gap 1, opp_overlap 2158211 ATGATAATGTCTAAA TAGCCATCCCA AAT CGGG-TGGCTA TTTTTTTAGTTTACA TERM 2108 2158211 - 2158234 + F 100 -8.9 -5.72207 | opp_overlap 2158211 ATGATAATGTCTAAA TAGCCATCC CAAATC GGGTGGCTA TTTTTTTAGTTTACA TERM 2109 2158293 - 2158306 + F 71 -6.7 -4.0127 | ACCTTTAAAAGGTCG TGTGC ATCT GCACA TTTAATTGTGAGTCT TERM 2110 2161018 - 2160990 - g 73 -11.1 -2.63073 | opp_overlap 2160996 2160998 2161008, overlap 2160987 2160998 TGGTGTCAAGAAGAG CCACAAAACCAAG GTG CTTGGTATTGTAG TCAACACCACTTTTG TERM 2111 2161010 - 2160998 - g 79 -7.7 -4.47873 | opp_overlap 2160996 2160998 2161008, overlap 2160990 2160987 AGAAGAGCCACAAAA CCAAG GTG CTTGG TATTGTAGTCAACAC kgd 2158344 - 2161166 + | alpha-ketoglutarate decarboxylase TERM 2112 2161843 - 2161825 - g 72 -10.4 -2.84617 | overlap 2161822 2161821 TAGCTGAAAAAGGCA TTGATGCT GCG AGCATCAA AGGTACAGGTAAAGG Patl_1800 2161176 - 2162663 + | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase TERM 2113 2162675 - 2162697 + F 100 -12.8 -4.22591 | opp_overlap 2162674 TTAATAGGATCTAAG CGGGTAAGTC ATT GACTTACTCG TTTCTTGCCGTTGTT TERM 2114 2162742 - 2162756 + F 87 -4.9 -5.4505 | opp_overlap 2162742 GGCTAACAAAATCAA GCTGC CAAGC GCGGC TTTTTTCTTAAACAA sucC 2162787 - 2163956 + | succinyl-CoA synthetase subunit beta TERM 2115 2164007 - 2163976 - g 70 -2.2 -4.92314 | ACTAATCGACAAAAA CACCAAGGTAATCT GTCA AGGTTTCACTGGTG GACAAGGTACTTTCC TERM 2116 2164160 - 2164143 - g 71 -6.9 -4.15788 | opp_overlap 2164143 AAGCGGTTCAAGAAA CAGGCGC TACT GCGACTG TTATCTATGTACCAG Patl_1802 2163953 - 2164825 + | succinyl-CoA synthetase, alpha subunit TERM 2117 2164848 - 2164864 + T 100 -9.4 -5.64274 | opp_overlap 2164848 TAGTACTCATAAAAA CCCGCT TTTGT AGCGGG TTTTTTTATGACTAA TERM 2118 2164864 - 2164848 - T 93 -9.4 -4.88736 | opp_overlap 2164848 TAGTACTCATAAAAA CCCGCT TTTGT AGCGGG TTTTTTTATGACTAA TERM 2119 2165325 - 2165312 - T 82 -8.1 -4.64657 | opp_overlap 2165311 2165312 GCAAAGTGTTAAAAA GGAGC CTAA GCTCC CTTGCTTACCTTTGA Patl_1803 2167540 - 2165345 - | peptidase S9, prolyl oligopeptidase active site region Patl_1804 2169029 - 2167608 - | FAD linked oxidase-like Patl_1805 2169191 - 2169901 + | HxlR family transcriptional regulator TERM 2120 2169880 - 2169905 + T 83 -12.7 -2.66335 | overlap 2169877 CAAAAAACGCGAAGG GCACTTACTCG TGTC TGAGTAAGTGC TGGGTTCTATCTTAC Patl_1806 2171314 - 2169917 - | L-sorbosone dehydrogenase TERM 2121 2170621 - 2170637 + g 78 -5.9 -4.7373 | AAAGTTTAGTGCCGT CCTTATT GGC GATAAGG TTTTTGGTCCAATGA TERM 2122 2171455 - 2171468 + r 75 -8.1 -3.98826 | AAACGTTTATGTTTT GGCGT CATT ACGCC TTTATACGTTAATAG Patl_1807 2172403 - 2171621 - | extracellular solute-binding protein TERM 2123 2172133 - 2172146 + g 70 -2.3 -5.06451 | TGACTGTTAGCGCAG CCTGA ACGT TCTGG TTTTTTAACATGCTG Patl_1808 2173541 - 2172537 - | luciferase-like Patl_1809 2174341 - 2173646 - | peptidase E TERM 2124 2174420 - 2174469 + r 84 -10.4 -3.89617 | gap 2, opp_overlap 2174425, overlap 2174425 AAATTTCAGGCAATA AAAAACCGGCTACTTGATGAAATA CAAC TATTTC-TCAGGT-GCCGGTTTTA TTTACGTTTCTACAT TERM 2125 2174425 - 2174464 + r 93 -10.3 -4.96468 | gap 2, opp_overlap 2174425, overlap 2174420 TCAGGCAATAAAAAA CCGGCTACTTGATGAAATA CAAC TATTTC-TCAGGT-GCCGG TTTTATTTACGTTTC TERM 2126 2174464 - 2174425 - R 93 -8.1 -5.4833 | gap 2, opp_overlap 2174420 2174425 TCAGGCAATAAAAAA CCGGCTACTTGATGAAATA CAAC TATTTC-TCAGGT-GCCGG TTTTATTTACGTTTC TERM 2127 2174474 - 2174492 + r 76 -4.6 -5.03715 | TGCCGGTTTTATTTA CGTTTCTA CAT TAAAAACG TTTTTTCACCGTAAT Patl_1810 2177072 - 2174484 - | TonB-dependent receptor TERM 2128 2175968 - 2175958 - G 82 -6.8 -4.84017 | AATTCCTGAGAAAAA GAGC TTT GCTC AGAGTCGTTCAAAGT Patl_1811 2177408 - 2178085 + | phosphoglycerate mutase Patl_1812 2178101 - 2179327 + | acyl-CoA dehydrogenase-like TERM 2129 2179417 - 2179443 + G 88 -12.4 -3.57144 | CAACATATTGCCGGT TTTAGTGGCCCT GTA AAGGCCACTAAA TTTGCAGGTGGGCAG Patl_1813 2179342 - 2180376 + | aminoglycoside phosphotransferase TERM 2130 2180391 - 2180409 + F 79 -8.8 -4.09685 | opp_overlap 2180383 2180381 2180391 AATAACAGCTACATA CGCCGC CGATTAA GCGGCG TTTTAACAGATAACG TERM 2131 2180409 - 2180391 - f 72 -9.5 -2.96296 | opp_overlap 2180391, overlap 2180383 2180381 AATAACAGCTACATA CGCCGCC GATTA AGCGGCG TTTTAACAGATAACG Patl_1814 2180434 - 2181408 + | zinc-binding alcohol dehydrogenase TERM 2132 2181492 - 2181521 + T 93 -10.7 -4.76644 | opp_overlap 2181481 2181497, overlap 2181497 AACACTTGTTAAACA AAAAACGGGCCTC AAAT GAGGCCCGTTTCG TTTTTGGTGCGTGTT TERM 2133 2181516 - 2181497 - T 100 -15 -5.63517 | opp_overlap 2181497 2181492 TTGTTAAACAAAAAA CGGGCCTC AAAT GAGGCCCG TTTCGTTTTTGGTGC TERM 2134 2181497 - 2181516 + T 100 -15 -4.35327 | opp_overlap 2181497, overlap 2181492 TTGTTAAACAAAAAA CGGGCCTC AAAT GAGGCCCG TTTCGTTTTTGGTGC Patl_1815 2182031 - 2181636 - | hypothetical protein Patl_1816 2183774 - 2182608 - | aspartyl/asparaginyl beta-hydroxylase Patl_1817 2183924 - 2184463 + | hypothetical protein TERM 2135 2184546 - 2184518 - T 100 -7.4 -5.7827 | opp_overlap 2184518 2184538 AACAGAAATAAAAAA GCAGGCACGAAC GTGAT ATTCAAGCCTGC TTGTATTGCATCATA Patl_1818 2186659 - 2184581 - | peptidase S9, prolyl oligopeptidase active site region TERM 2136 2184857 - 2184875 + g 72 -5.2 -4.56597 | opp_overlap 2184857 GTGCTTCATGTATAA GTCTTGCG CTT CCCAAGGC TTTTTACCAAACCAA TERM 2137 2185247 - 2185294 + g 78 -6.2 -4.67173 | gap 1, overlap 2185255 ATGCGGCCCGTAATT GGCGACCGGCCCCCCGTGTATCT CTA AGATAAGCGGGTAGC-GTTTGCC TTCTTTTTTGCCTTG TERM 2138 2186020 - 2186006 - G 75 -10 -3.53012 | opp_overlap 2185994 GCCCCCGTGGTTAAA CTCACC TTG GGTGAG TTGCCGAGGGGTGCC Patl_1819 2186895 - 2187197 + | hypothetical protein TERM 2139 2187302 - 2187322 + T 95 -11.8 -4.21922 | AAGGGTTAGTGGTTT GGCCGCTC GGGTA GGGCGGCC TTTAATTTTGCCTCA Patl_1820 2188608 - 2187292 - | hypothetical protein TERM 2140 2188449 - 2188470 + g 71 -3.7 -4.7497 | overlap 2188441 2188427 2188452 TTGTACTTTGCACCG CAATCGATT TTTG AGTCGATGG TTTTTCATCGCTGCA Patl_1822 2192254 - 2189984 - | TonB-dependent receptor, plug TERM 2141 2190865 - 2190881 + g 72 -8.7 -3.70037 | AAATCGCTTTGGTTG TGCCATC CCC GGTGGCA TTTAAATCGTAGTTC TERM 2142 2191919 - 2191907 - G 72 -4.7 -4.66833 | TTGTAAGGTTAAAAA CGGTG CAT CGCCG CCGCCAGGAAATCCG TERM 2143 2192339 - 2192302 - H 100 -15.9 -3.96188 | opp_overlap 2192298 2192302 2192308 AACGATATGTATAAA TGCAAACGATTGCAA TTGGTATT TTGCAATCGTTTGCA TTTAGTGTGGAATGT TERM 2144 2192302 - 2192339 + H 100 -15.9 -3.84266 | opp_overlap 2192302, overlap 2192298 2192308 AACGATATGTATAAA TGCAAACGATTGCAA TTGGTATT TTGCAATCGTTTGCA TTTAGTGTGGAATGT TERM 2145 2192308 - 2192333 + H 73 -7.7 -3.8822 | opp_overlap 2192302, overlap 2192298 2192302 ATGTATAAATGCAAA CGATTGCAA TTGGTATT TTGCAATCG TTTGCATTTAGTGTG TERM 2146 2193320 - 2193306 - g 71 -10 -3.13403 | opp_overlap 2193297, overlap 2193304 CCGGGGGTATCAAGA TGCGCT TGA AGCGCA CTCGATCACATTTGA Patl_1823 2192680 - 2193705 + | LacI family transcription regulator TERM 2147 2193737 - 2193750 + F 74 -5.3 -4.72029 | opp_overlap 2193737 TAAAGTATTATTGAA TGCAA ACGA TTGCA TTTTGTTAACTTACA TERM 2148 2194507 - 2194520 + G 72 -8.1 -3.79251 | AGCAGGGGATTGGCT CGTGG CTAC CCACG TTTAATCGTGAAGTG Patl_1824 2193807 - 2195054 + | major facilitator transporter TERM 2149 2195992 - 2195972 - g 95 -11.9 -4.1891 | opp_overlap 2195972 2195971 TTGCTTCAATAGAAA CCACGGAAA TTG TTCCCGTGG ATTTAAATTGCTTGT Patl_1825 2195059 - 2196588 + | Alpha,alpha-trehalase TERM 2150 2196695 - 2196656 - T 100 -15.1 -5.07652 | overlap 2196657 TTGGCTAAAACAAAA GCGACACGCCCTTAGAC TGAGTG ATCCAAGGGCGTGTCGA GGCATGTTGGGTAAA TERM 2151 2196694 - 2196657 - T 100 -18.6 -3.63868 | overlap 2196656 TGGCTAAAACAAAAG CGACACGCCCTTAGAC TGAGTG ATCCAAGGGCGTGTCG AGGCATGTTGGGTAA Patl_1826 2199601 - 2196716 - | TonB-dependent receptor TERM 2152 2197058 - 2197088 + g 82 -12.1 -3.36569 | gap 1, opp_overlap 2197067, overlap 2197062 2197067 TTCTAAACCACTGCC CGCAGATAACACGT TTTC ACGTGTTATCT-CG TCTTTCGCCGCTTCA TERM 2153 2197062 - 2197085 + g 79 -12.6 -2.84504 | opp_overlap 2197067, overlap 2197058 2197067 AAACCACTGCCCGCA GATAACACGT TTTC ACGTGTTATC TCGTCTTTCGCCGCT TERM 2154 2199901 - 2199885 - H 74 -5.1 -4.76123 | AAATGACTAATAAAA GAACCAT GAC AAGGTTC AAGTACAGCGCTAGC TERM 2155 2200017 - 2199998 - H 90 -9.3 -4.89477 | GTCTGAATAATAAAA GTCGGCT ATAAAA AGCCGAC TAAAGCACACTTACA TERM 2156 2201835 - 2201824 - g 72 -5.8 -4.3767 | opp_overlap 2201825, overlap 2201825 TTAGATGATAAGAAA CGCT ATCC AGCG GGCAGCTTAATTATC TERM 2157 2202041 - 2202053 + G 76 -9.1 -3.78775 | opp_overlap 2202050 CTTCATCGCTCAGCG CGGGT AAC ACCCG TTTCGTGATAGAGCA Patl_1827 2200054 - 2202789 + | peptidase M14, carboxypeptidase A TERM 2158 2202869 - 2202894 + T 100 -14.8 -5.99154 | opp_overlap 2202854 2202869 TGGCGCGAATAAAAA CGCCAAGTGG GGAAAA CCACTTGGCG TTTTTTTGTTTAATA TERM 2159 2202894 - 2202869 - T 100 -14.8 -5.06414 | opp_overlap 2202869, overlap 2202854 TGGCGCGAATAAAAA CGCCAAGTGG GGAAAA CCACTTGGCG TTTTTTTGTTTAATA Patl_1828 2203878 - 2202982 - | carboxylesterase TERM 2160 2203488 - 2203502 + g 71 -10 -3.18274 | overlap 2203487 TGCGGTAATGCTCAG CCCAAG GGG CTTGGG TTGCATTCACATAAA TERM 2161 2203641 - 2203654 + g 70 -5.3 -4.39166 | CGCGCTGTGCACCGG CTTTG GTGA CAAAG TTTTCATCTGTACAG Patl_1829 2204996 - 2203878 - | alcohol dehydrogenase GroES-like protein TERM 2162 2204301 - 2204311 + g 72 -5.4 -4.42081 | overlap 2204295 ATCGGTCGCGCCAAG TTGC TTA GCAA TTTTAAATTTATCTT TERM 2163 2204880 - 2204906 + g 78 -5.9 -4.83169 | gap 1, opp_overlap 2204873, overlap 2204867 ATGACATACGCCAGT GGCGATG-ACTT TAAT AAGTACTTCGCC TTTTTGTGGCGGCAT Patl_1830 2205549 - 2205100 - | hypothetical protein Patl_1831 2206564 - 2205665 - | amidohydrolase 2 Patl_1832 2207374 - 2206622 - | short-chain dehydrogenase/reductase SDR Patl_1833 2207899 - 2207450 - | hypothetical protein TERM 2164 2207652 - 2207638 - G 77 -3.4 -5.10064 | CTGAACAGACAAAAA GCGCCG AAG CGGTAC ACATTCCGATAGAGC Patl_1834 2209323 - 2207902 - | MiaB-like tRNA modifying enzyme YliG TERM 2165 2208693 - 2208717 + g 74 -10.7 -3.27498 | overlap 2208694 CCAATAGCTCTTTGA CCCCAGCGTTT TTT AAGCGCTGGGC TTCATCTAAAATCTC TERM 2166 2208694 - 2208716 + g 83 -14.2 -2.56177 | overlap 2208693 CAATAGCTCTTTGAC CCCAGCGTTT TTT AAGCGCTGGG CTTCATCTAAAATCT TERM 2167 2209646 - 2209601 - R 83 -12.7 -2.7535 | gap 1, opp_overlap 2209602 2209603, overlap 2209598 2209596 2209603 TTCGGCAAGACATCA CATGAGTCACCTGCGAGGTGAT GCA AT-ACCTTGCCGGTGGCTCATG GTTGCACAGCGGGTT TERM 2168 2209644 - 2209603 - R 72 -9.5 -2.92175 | gap 1, opp_overlap 2209602 2209603, overlap 2209601 2209598 2209596 CGGCAAGACATCACA TGAGTCACCTGCGAGGTGAT GCA AT-ACCTTGCCGGTGGCTCA TGGTTGCACAGCGGG TERM 2169 2209603 - 2209644 + r 91 -13.9 -2.70932 | gap 1, opp_overlap 2209603 2209601 2209598 2209596, overlap 2209602 CGGCAAGACATCACA TGAGTCACCTGCGAGGTGAT GCA AT-ACCTTGCCGGTGGCTCA TGGTTGCACAGCGGG Patl_1835 2215199 - 2209662 - | hypothetical protein Patl_1836 2219645 - 2215620 - | two component AraC family transcriptional regulator TERM 2170 2220009 - 2219994 - R 80 -10.4 -3.63782 | GAACAGTAGCCCAAA GCTCGC TTAC GCGAGC CACCTTTACGTGGGG Patl_1837 2221656 - 2220064 - | L-lactate permease TERM 2171 2220438 - 2220413 - G 72 -8.3 -3.76224 | TGTTGACCGATTAAA CTCACCGCAGA ATAT TCTTCAGTGAG CATCATCATGTTGAC TERM 2172 2221014 - 2221034 + g 100 -7.6 -5.60993 | opp_overlap 2221014 2221012 ATAACACAATAAATA GCCAGTTT TGCTT AAGCTGGC TTTTTTTCTCGACCA TERM 2173 2221360 - 2221321 - G 73 -4.2 -4.8622 | opp_overlap 2221322, overlap 2221328 GCCTTCAATCAAAAA GGCAAAAGCCCAACCTAC GACC ATAAGCTGGGCGATTGCA TTACTGCTGATGTGA TERM 2174 2221353 - 2221328 - G 81 -8.3 -4.49644 | opp_overlap 2221322, overlap 2221321 ATCAAAAAGGCAAAA GCCCAACCTAC GACC ATAAGCTGGGC GATTGCATTACTGCT Patl_1838 2222121 - 2222408 + | hypothetical protein TERM 2175 2223168 - 2223192 + G 76 -12.1 -2.72461 | overlap 2223167 AAAGCAATTGCCGCG TGGCCTCCTGC ATG GCAAGGGGCCA ATTTAAGCCGAATTC TERM 2176 2223387 - 2223353 - g 79 -9.4 -4.18197 | gap 1, overlap 2223339 AGCCGCCATTGAAAA TGGCGAA-GCGCCCA GCTATA TGGGCACGTTCACCA GCGCCCAGCGCTTTG TERM 2177 2223388 - 2223398 + G 84 -8.2 -4.67651 | TGGGCACGTTCACCA GCGC CCA GCGC TTTGTTTTACACTCT TERM 2178 2224502 - 2224492 - g 76 -2.4 -5.44721 | opp_overlap 2224498 2224499 ATGAGTCGAAAAAAA GACG TTA CGAC GCAGGTCGCTTTTCG Patl_1839 2222670 - 2225138 + | excinuclease ABC, A subunit TERM 2179 2225436 - 2225454 + F 74 -3.8 -5.16681 | TCATTTTAGGGTAAA CCGTTATC ATT GGTAGTGG TTTTATTCTTTTTGA TERM 2180 2225544 - 2225564 + F 73 -7.7 -3.88396 | opp_overlap 2225560, overlap 2225542 2225560 GTGCTCGCATTGTTT GTTTTCTTA TAT TAAGGAAAC TGTTTTCATTTGAAG Patl_1840 2225731 - 2228373 + | TonB-dependent receptor TERM 2181 2228404 - 2228418 + F 77 -6.4 -4.58395 | overlap 2228383 2228405 GGCAACCCGCTGGGC TGACCT TAG AGGTCG TTTTTAAGCGATGGA TERM 2182 2229140 - 2229157 + G 84 -8.3 -4.69512 | AGCGAAGCATTTATC CGTCGCG ACAG CGCGCCG TTCTTTTTGTATTTT TERM 2183 2229363 - 2229335 - g 71 -3.9 -4.82901 | CCCGCTGCACAAAAA GAAATAGCTCAAT ACT ATCAGGCTATCTC TCGTCTTGACCAAGG TERM 2184 2229714 - 2229701 - g 72 -8.1 -3.75517 | ATTTTAGAAAACGAA CAGCC TAAA GGCTG GGAACATGTATATGC Patl_1841 2228429 - 2230093 + | sulfatase Patl_1842 2230172 - 2231752 + | sulfatase Patl_1843 2232943 - 2232104 - | integron integrase TERM 2185 2233205 - 2233153 - H 88 -11.3 -3.60234 | opp_overlap 2233153 2233153 2233151 2233155 2233180, overlap 2233162 GGACAGATGGTGAAA GGCGGAAAAGTTCCGTGTTTAATAC GCG GATCCAATCACGGAACCTTTCCGGC TATTAATATTGTTAT Patl_1844 2233243 - 2233686 + | hypothetical protein Patl_1845 2234673 - 2233717 - | transposase IS116/IS110/IS902 Patl_1846 2236210 - 2235002 - | transposase, IS4 TERM 2186 2235820 - 2235804 - G 71 -9.5 -3.18023 | overlap 2235802 GGATTATGACTAACA GGTGAAT TGT ATTCACC GAATGAAAATACGCG TERM 2187 2236492 - 2236478 - g 86 -2.8 -5.8096 | TAGAAAAAATAAAAA GCTCAC TCG ATAAGC TCTACATTGGGTATC Patl_1847 2236333 - 2236671 + | hypothetical protein Patl_1848 2238036 - 2237053 - | hypothetical protein Patl_1849 2238532 - 2238080 - | putative transposase Patl_1850 2238594 - 2238938 + | hypothetical protein Patl_1851 2239658 - 2240572 + | hypothetical protein Patl_1852 2242820 - 2240904 - | glycoside hydrolase family protein TERM 2188 2241265 - 2241290 + g 71 -3.9 -4.87291 | gap 1 TTGAATGCGGCTTGG CGCCACAAACGC TCT GCGACT-TGGCG TTTTTGCTTGGGGTG Patl_1853 2243422 - 2242955 - | hypothetical protein TERM 2189 2243203 - 2243193 - G 82 -6.8 -4.78848 | opp_overlap 2243192 GTCTTAAACATAAAA GCCT TTA AGGC ATCAATTGATTCCCA Patl_1854 2243783 - 2243493 - | YciI-like protein TERM 2190 2244004 - 2244028 + r 78 -7.1 -4.43208 | opp_overlap 2244008, overlap 2244008 2244022 CCGAGTTGCGAAAAA AAAAGACCAGC TAG GCTGGTCTTGA TTTCTTTAAGACTCT TERM 2191 2244024 - 2244008 - R 100 -12.3 -6.06723 | opp_overlap 2244004 2244008 2244022 GTTGCGAAAAAAAAA GACCAGC TAG GCTGGTC TTGATTTCTTTAAGA TERM 2192 2244008 - 2244024 + r 90 -12.3 -3.75884 | opp_overlap 2244008, overlap 2244004 2244022 GTTGCGAAAAAAAAA GACCAGC TAG GCTGGTC TTGATTTCTTTAAGA Patl_1855 2245858 - 2244095 - | Pyrrolo-quinoline quinone TERM 2193 2244582 - 2244602 + g 72 -5.3 -4.56597 | AATTCGGTGTCCTTG CTGTAGGCC ATA GGCATCCAG TTTTTAGCACCCAAG TERM 2194 2245106 - 2245127 + g 82 -11.5 -3.54129 | opp_overlap 2245105 2245104 GGATTTCCATAAATC GCCAGGCCA CGTT TGGCCGGGC TTTCCACCCGATATG Patl_1856 2246940 - 2246056 - | extracellular solute-binding protein Patl_1857 2247367 - 2246927 - | cytochrome c550 TERM 2195 2247473 - 2247488 + H 81 -7.6 -4.58685 | opp_overlap 2247472 TAGCTAGATTAAATC TCATCC TTTA GGATGA TTTTTAACAAAGTTT TERM 2196 2248771 - 2248790 + G 89 -9.3 -4.61868 | opp_overlap 2248763, overlap 2248763 TTAAGAATGCCTTTG GCGTTGG TGCAAC CCAACGC TTTTGTGTCTGAATC Patl_1858 2247667 - 2248884 + | hypothetical protein Patl_1859 2248911 - 2249900 + | YVTN beta-propeller repeat-containing protein Patl_1860 2249897 - 2250754 + | ABC transporter related TERM 2197 2251437 - 2251454 + G 76 -8.5 -4.18697 | overlap 2251424 2251426 ATTTGCGCTGTACGG GCAAGTT AATG AACTTGC TTTTACCGTGGTTTT Patl_1861 2250751 - 2251527 + | ABC-2 type transporter TERM 2198 2252889 - 2252870 - g 82 -2.8 -5.58454 | gap 1 TGCACAGTAAAAAAA CTCA-GCAC GCA GAGCATGAG TGGGTCATTGGTGGC Patl_1862 2251723 - 2254044 + | TonB-dependent receptor TERM 2199 2254535 - 2254582 + G 82 -2.7 -5.46698 | gap 2, opp_overlap 2254521, overlap 2254521 TGGCATGGAGTCTTT GCCTTCTTTGCGCTC--TCCCGT ACTG ACCGGACCGGGTGCAGGGGGGGC TTTTTTAATTTTAGA TERM 2200 2255286 - 2255261 - g 76 -4.7 -4.84914 | overlap 2255263 AGCGATAGAAGAAAA TAGCCACTCCA GTTT TGGATTGACCA GTAGTTATCATTGGC Patl_1863 2254044 - 2256389 + | TonB-dependent receptor TERM 2201 2256990 - 2256971 - g 76 -2.2 -5.36441 | gap 1 TTTTGATATAAAAAA CAAAAC-CG CGC CGAGTTTTA TGTCTCCTGTTCTAC Patl_1864 2256483 - 2257523 + | putative sulfonate ABC transporter, periplasmic sulfonate-binding protein Patl_1865 2257576 - 2258346 + | binding-protein-dependent transport systems inner membrane component Patl_1866 2258339 - 2259079 + | ABC transporter related TERM 2202 2260229 - 2260213 - g 78 -5.1 -4.99056 | CAACAGAACCAAAAA TTGCTCG CTG CGATCAA CCGAAGGGGGGAAGT Patl_1867 2259115 - 2260461 + | hypothetical protein Patl_1868 2260647 - 2261804 + | hypothetical protein TERM 2203 2262078 - 2262067 - g 70 -2.2 -5.05782 | ATGCATTGCAAAAAA CACT GGCA AGCG AAGAAATGCAAAGGG Patl_1869 2261841 - 2262161 + | ethyl tert-butyl ether degradation EthD TERM 2204 2262183 - 2262209 + F 100 -12.5 -5.0916 | opp_overlap 2262169 2262163 AGTTTTATTACCTGA TGCAGTAAAAC CCACC GTTTTACTGCA TTTTTGTGTTAAAAA Patl_1870 2262298 - 2262954 + | two component LuxR family transcriptional regulator Patl_1871 2265521 - 2262951 - | PAS/PAC sensor hybrid histidine kinase TERM 2205 2264116 - 2264143 + g 89 -11.4 -4.13767 | AGCCTGCGCTCTTCT GCCTCAATAATG AGTT CATCATTGAGGC TTTTGAGCTGGGACG TERM 2206 2264317 - 2264328 + g 86 -4.4 -5.45726 | AACAAATACCGAGAT TCAC CAGC GTGA TTTTTTTCCGCTATC Patl_1872 2266663 - 2265518 - | hypothetical protein Patl_1873 2268955 - 2266877 - | FMN-binding TERM 2207 2267628 - 2267615 - G 76 -2.5 -5.33866 | GAAACCGACAAAAAA TAATA CAAA TATTA AACTGGCAAAACGCA TERM 2208 2269013 - 2268974 - R 89 -10.1 -4.21974 | opp_overlap 2268975, overlap 2268975 GGATCAGCGAATAAA TGTACATACCGCCTG CGGACAGAAT CAGGCGGCATGTACT TCTTCAGCTTAGAAG TERM 2209 2269012 - 2268975 - R 93 -13.6 -3.12702 | opp_overlap 2268975, overlap 2268974 GATCAGCGAATAAAT GTACATACCGCCTG CGGACAGAAT CAGGCGGCATGTAC TTCTTCAGCTTAGAA TERM 2210 2268975 - 2269012 + r 88 -11.4 -3.68222 | opp_overlap 2268975 2268974 GATCAGCGAATAAAT GTACATACCGCCTG CGGACAGAAT CAGGCGGCATGTAC TTCTTCAGCTTAGAA Patl_1874 2270542 - 2269022 - | aldehyde dehydrogenase TERM 2211 2270271 - 2270283 + g 71 -3.3 -4.74132 | GTCAGGTTTTCTTCC AAGCG GTC CGCTA TTTTTAATAGGATAT TERM 2212 2270805 - 2270786 - R 87 -6.4 -5.28778 | AGTAGGGATAAAAAA GCCCTC AGTGTGAA GAGGGC CGGTTTCTATGAACT Patl_1875 2271473 - 2270838 - | NAD-dependent epimerase/dehydratase TERM 2213 2270949 - 2270961 + g 76 -4.1 -4.97158 | GGCGACGTCTTCTCG GGTGA TGA TCATC TTTTCTTTACTGTCG Patl_1876 2271868 - 2272224 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 2214 2272255 - 2272272 + F 93 -8.4 -5.24129 | TTCTTAGATTACCTA GCCGCT CTTTGA AGCGGC TTTTTTATGGAAAAC Patl_1877 2272426 - 2272656 + | hypothetical protein Patl_1878 2273681 - 2272764 - | LysR family transcriptional regulator TERM 2215 2273881 - 2273898 + r 73 -8.4 -3.65812 | opp_overlap 2273853 2273881 GACTGGTATAAAAAA GCCACC CAAGTA GGTGGC TTATATTGGAGGGGA TERM 2216 2273898 - 2273881 - R 93 -9.1 -5.252 | opp_overlap 2273881, overlap 2273853 GACTGGTATAAAAAA GCCACCC AAGT AGGTGGC TTATATTGGAGGGGA asnC 2275316 - 2273919 - | asparaginyl-tRNA synthetase TERM 2217 2273960 - 2273970 + g 71 -6.8 -4.18494 | opp_overlap 2273953 2273960 GTGGGAAAGCAATTA CGTC TCG GACG TTTTGCATGCCAGTG TERM 2218 2275367 - 2275353 - H 76 -7.2 -4.2828 | opp_overlap 2275353 GGGTATTTAGTAAAA TTTAGC AAT GCTAAA TTATGTCATTCTTTT Patl_1880 2275574 - 2275960 + | hypothetical protein TERM 2219 2276055 - 2276075 + F 70 -8.3 -3.30389 | overlap 2276053 TCAAAATCAGTTTGA TAGCCCTCA CTT TGATGGCTA TATTGTAGTGGTCTT Patl_1881 2276150 - 2276461 + | hypothetical protein TERM 2220 2276538 - 2276519 - T 100 -12.2 -4.82901 | TGGCGGCGATAAAAA GGCGCTAA AACA TTAGCGCC AAAATCGGGATGGTG Patl_1882 2277636 - 2276605 - | cysteine synthases TERM 2221 2277534 - 2277560 + g 71 -7.2 -4.14243 | opp_overlap 2277533 2277534 TATCTTCATAAATAC GCCCTCTGGTGA AGG TCGCTGAAGGGC TTTTAGGGTCAGCTG Patl_1883 2277778 - 2278230 + | AsnC family transcriptional regulator Patl_1884 2278396 - 2279769 + | Na+/H+ antiporter NhaC TERM 2222 2280247 - 2280270 + G 70 -4.7 -4.46212 | gap 1, overlap 2280254 CACAGGGTAATGTGG TGCCATATCA ATCTG TGAT-TGGCA TTTTATCATCAGGCG Patl_1885 2279874 - 2281577 + | gamma-glutamyltransferase TERM 2223 2281651 - 2281631 - T 100 -15.5 -4.33956 | opp_overlap 2281631 CCTAAAACATATAAA CGGTTGCCA AAA TGGCAACCG TTTTTTTTGCGTTGA TERM 2224 2281631 - 2281651 + T 100 -15.5 -5.86332 | opp_overlap 2281631 CCTAAAACATATAAA CGGTTGCCA AAA TGGCAACCG TTTTTTTTGCGTTGA Patl_1886 2282477 - 2281737 - | UDP-2,3-diacylglucosamine hydrolase TERM 2225 2282518 - 2282496 - R 100 -12.8 -4.41548 | GGAGACTCGATAAAA GGCCTGTTCA GAA TAAACAGGCC TCGAAAAATAGATTA Patl_1887 2283025 - 2282531 - | peptidylprolyl isomerase TERM 2226 2284570 - 2284607 + G 71 -3.3 -4.7416 | gap 1, opp_overlap 2284572, overlap 2284575 AATATTATTCTTGAA GA-TGGCCCCAGCGGCAC AAC GTGGCGCAAGGGTTAGTC TTTTTCGGGTTTTAA cysS 2283211 - 2284605 + | cysteinyl-tRNA synthetase TERM 2227 2284655 - 2284636 - f 93 -13.6 -3.15638 | opp_overlap 2284636 AAAAGTGACATTCAA GGCCAGCT GATT AGCTGGCC TTTTTATTGCGACGG TERM 2228 2284636 - 2284655 + F 100 -13.6 -5.06414 | opp_overlap 2284636 AAAAGTGACATTCAA GGCCAGCT GATT AGCTGGCC TTTTTATTGCGACGG TERM 2229 2284980 - 2285036 + F 95 -14 -3.4691 | gap 1, opp_overlap 2284982 2284991, overlap 2284982 2284982 2284984 AAAGACAGATGGAGA AAGGCGGAAAAGTTCCGTGTTTAATAT GCGG ATGC-AATCACGGAACTTTTCCGCCTA TTAATATTGTTAGCT TERM 2230 2285034 - 2284982 - f 100 -18.1 -3.96932 | gap 1, opp_overlap 2284982 2284982 2284980 2284984, overlap 2284991 AGACAGATGGAGAAA GGCGGAAAAGTTCCGTGTTTA-AT ATGCGG ATGCAATCACGGAACTTTTCCGCC TATTAATATTGTTAG TERM 2231 2284982 - 2285034 + F 100 -16.6 -3.29958 | gap 1, opp_overlap 2284982 2284991, overlap 2284982 2284980 2284984 AGACAGATGGAGAAA GGCGGAAAAGTTCCGTGTTTAATAT GCGG ATGC-AATCACGGAACTTTTCCGCC TATTAATATTGTTAG TERM 2232 2286282 - 2286272 - g 79 -2.6 -5.36441 | GGTTTATATAAAAAA TTAT CTG ATAA ACAGCAGAAAATATT Patl_1889 2285138 - 2286502 + | filamentation induced by cAMP protein Fic TERM 2233 2286664 - 2286647 - T 70 -2.7 -5.03145 | overlap 2286648 GAATCGTGTAAAAAA CTCTCCT GTTT AGGAAAA TACTTACATAGACAC Patl_1890 2287613 - 2287170 - | hypothetical protein Patl_1891 2287973 - 2287692 - | hypothetical protein Patl_1892 2288232 - 2288083 - | hypothetical protein TERM 2234 2289074 - 2289084 + H 76 -3.2 -5.20222 | CATTCTGTCATCGGT TGCT TGT GGCA TTTTGTTTGTTTCCT Patl_1893 2289471 - 2289971 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2235 2290241 - 2290218 - T 90 -11 -4.13995 | overlap 2290219 2290221 TCTTGATAAAGTAAA GCACTCGCAC TTAG GTGCGAGTGA CATCCACCTTGATTT TERM 2236 2290240 - 2290219 - T 95 -14.5 -3.07915 | overlap 2290218 2290221 CTTGATAAAGTAAAG CACTCGCAC TTAG GTGCGAGTG ACATCCACCTTGATT TERM 2237 2290238 - 2290221 - T 81 -11.3 -3.09117 | overlap 2290219 2290218 TGATAAAGTAAAGCA CTCGCAC TTAG GTGCGAG TGACATCCACCTTGA Patl_1894 2291889 - 2290228 - | lytic transglycosylase, catalytic TERM 2238 2290399 - 2290410 + g 73 -2.2 -5.2422 | overlap 2290398 GAGGGTGCGTATTAC CGCA TCGC TGTG TTTTTTGCTGTCCTT Patl_1895 2292691 - 2291918 - | hydroxyacylglutathione hydrolase Patl_1896 2292849 - 2293598 + | hypothetical protein TERM 2239 2293631 - 2293658 + T 100 -14.2 -3.75657 | opp_overlap 2293631 TGCACACATAAAAAA GCCCACTTAGGA GTTG TCCTAAGCGGGC TTATTGGCTATTTAG TERM 2240 2293658 - 2293631 - T 100 -16.4 -5.4251 | opp_overlap 2293631 TGCACACATAAAAAA GCCCACTTAGGA GTTG TCCTAAGCGGGC TTATTGGCTATTTAG metG 2295722 - 2293695 - | methionyl-tRNA synthetase TERM 2241 2294754 - 2294729 - G 72 -10.5 -2.91264 | CTTTTGACTTAGACA TTTTGGCACCG TTAA CGGTGACAAAA CCGTGCACGTTAACG TERM 2242 2296846 - 2296861 + G 73 -7.6 -4.07526 | CTAAAATGTGCAGCA GCTGTT TCAA AACAGC TTTATATGAATGGTT Patl_1898 2295841 - 2296905 + | MRP family ATP-binding protein TERM 2243 2296913 - 2296962 + F 91 -10.7 -4.5442 | opp_overlap 2296910 2296918 2296920, overlap 2296920 ATATTTAAAAACGTT GAACATAGCCTCTTAGCTACGCA TAAT TGCGCGGCTAAGCGGCTGTCATC TTTTATGATTCGCCA TERM 2244 2296957 - 2296918 - f 82 -11.4 -3.10589 | opp_overlap 2296913 2296920, overlap 2296910 2296920 TAAAAACGTTGAACA TAGCCTCTTAGCTACGCA TAAT TGCGCGGCTAAGCGGCTG TCATCTTTTATGATT TERM 2245 2296955 - 2296920 - f 93 -14 -3.09983 | opp_overlap 2296920 2296913, overlap 2296918 2296910 AAAACGTTGAACATA GCCTCTTAGCTACGCA TAAT TGCGCGGCTAAGCGGC TGTCATCTTTTATGA TERM 2246 2296920 - 2296955 + F 93 -14 -3.03972 | opp_overlap 2296918 2296910 2296920, overlap 2296913 AAAACGTTGAACATA GCCTCTTAGCTACGCA TAAT TGCGCGGCTAAGCGGC TGTCATCTTTTATGA Patl_1899 2297011 - 2297610 + | deoxycytidine triphosphate deaminase Patl_1900 2298658 - 2297708 - | AraC family transcriptional regulator TERM 2247 2298529 - 2298519 - G 87 -6.8 -5.09426 | GGCAAGGTCAAAAAA CACG TGC CGTG GCTAACAACATGAAA Patl_1901 2298773 - 2299240 + | YHS TERM 2248 2299372 - 2299386 + T 78 -7.1 -4.37247 | opp_overlap 2299372 2299366 AGCACGAAAGCATAA CCCCA CACGT TGGGG TTTGTTCGTTACTTT TERM 2249 2299692 - 2299682 - T 84 -6.8 -4.98522 | AACGTGACAGAAAAA CGGT CAA ACCG ATCGAATAAGCTGCA Patl_1902 2301173 - 2300730 - | hypothetical protein TERM 2250 2301935 - 2301921 - H 79 -3.6 -5.42259 | TTAGCGTGAAAAAAA TTAACC TAA AGTTAA CGGGTTAATGAATGG TERM 2251 2302243 - 2302215 - g 93 -9 -4.82901 | gap 1 TGGTCTCTACAAAAA GTCGCTGTAACGC TTTT GC-TTACAACGAC TTCCAACAGTTTTAA Patl_1904 2302176 - 2304242 + | agarase Patl_1906 2305171 - 2306280 + | beta-lactamase Patl_1907 2307306 - 2307635 + | thioredoxin domain-containing protein Patl_1908 2307700 - 2309031 + | hypothetical protein Patl_1909 2309944 - 2309153 - | AraC family transcriptional regulator Patl_1910 2310185 - 2311489 + | major facilitator transporter Patl_1911 2311767 - 2313143 + | aldehyde dehydrogenase TERM 2252 2313278 - 2313301 + T 100 -16.8 -5.05505 | opp_overlap 2313278 AGCGCAATATAAAAA GGCAGCCAGA TTAT TCTGGCTGCC TTTTTAGTTTCTGCT TERM 2253 2313301 - 2313278 - T 100 -16.8 -5.09762 | opp_overlap 2313278 AGCGCAATATAAAAA GGCAGCCAGA TTAT TCTGGCTGCC TTTTTAGTTTCTGCT Patl_1912 2315942 - 2313351 - | peptidase M1, membrane alanine aminopeptidase TERM 2254 2314632 - 2314653 + g 71 -8 -3.8637 | overlap 2314631 2314652 TTCCCACAAGTCATC TGCTTGGG CGTTAC CCCAGGCA TGTTTTCTCATGTAA TERM 2255 2315189 - 2315204 + g 72 -5.4 -4.4009 | CCAAAATTTTGGGTG TTTGCG CCAC CGCGAA TTTTGTACGGTGGGC TERM 2256 2316140 - 2316111 - R 93 -12.3 -3.8448 | opp_overlap 2316118, overlap 2316118 GAACAGATGAGGAAA GGAAAAAGGCTCA TTGC TGAGCCTTTTTAC GTGATGGTGACATTG TERM 2257 2316133 - 2316118 - R 90 -9 -5.01811 | opp_overlap 2316118, overlap 2316111 TGAGGAAAGGAAAAA GGCTCA TTGC TGAGCC TTTTTACGTGATGGT TERM 2258 2316118 - 2316133 + r 89 -9 -4.68994 | opp_overlap 2316118 2316111 TGAGGAAAGGAAAAA GGCTCA TTGC TGAGCC TTTTTACGTGATGGT Patl_1913 2317828 - 2316179 - | AMP-dependent synthetase and ligase TERM 2259 2317852 - 2317870 + r 78 -7.4 -4.31379 | opp_overlap 2317853, overlap 2317853 CCTTATTCACATCAA AGGGCAAT TAG ATTGCCCC TTTTAATACATTAGT TERM 2260 2317869 - 2317853 - R 86 -10.9 -3.84825 | opp_overlap 2317852 2317853 CTTATTCACATCAAA GGGCAAT TAG ATTGCCC CTTTTAATACATTAG TERM 2261 2317853 - 2317869 + r 79 -10.9 -3.18105 | opp_overlap 2317853, overlap 2317852 CTTATTCACATCAAA GGGCAAT TAG ATTGCCC CTTTTAATACATTAG Patl_1914 2318673 - 2317906 - | short-chain dehydrogenase/reductase SDR Patl_1915 2319608 - 2318688 - | haloalkane dehalogenase TERM 2262 2318799 - 2318822 + g 71 -3.9 -4.85195 | gap 1 GATCGTGGTGTGAGA CTGA-CCTTG AGTGC CAGGGATCAG TTTTTGCATTATTTT TERM 2263 2319455 - 2319433 - G 71 -7 -4.06419 | TCTCTGTATAAATAA CTCCACGATG GTT CACCATGAAG CATTAAGACCACTTC Patl_1916 2319872 - 2321980 + | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding Patl_1917 2322012 - 2323196 + | acetyl-CoA acetyltransferases TERM 2264 2323224 - 2323198 - f 89 -11.7 -3.76492 | gap 1, overlap 2323199 TCGAAGTTTATTAAA TTTTAGGCGCCC TTAG GGGCGCC-AAAA TGCAAAAGAGGTTAC TERM 2265 2323224 - 2323199 - f 90 -13.3 -2.85574 | overlap 2323198 CGAAGTTTATTAAAT TTTAGGCGCCC TTAG GGGCGCCAAAA TGCAAAAGAGGTTAC TERM 2266 2324317 - 2324303 - g 78 -5.7 -4.7629 | TTATTAACCCAAAAA GCCTT TGCTG AAGGC AACCGTGCACTGGCG Patl_1918 2323244 - 2325046 + | acyl-CoA dehydrogenase-like TERM 2267 2325105 - 2325076 - f 83 -9.3 -4.12267 | opp_overlap 2325076, overlap 2325047 ATTAGAATAAGCAAA GGCGAACCTTTTC ATGT GAAAGCGTTCGCC TTTTTTATTAAAGGG TERM 2268 2325076 - 2325105 + F 100 -11.5 -5.4505 | opp_overlap 2325047 2325076 ATTAGAATAAGCAAA GGCGAACCTTTTC ATGT GAAAGCGTTCGCC TTTTTTATTAAAGGG Patl_1919 2325128 - 2326057 + | alpha/beta hydrolase fold Patl_1920 2327200 - 2326160 - | diguanylate cyclase TERM 2269 2326426 - 2326412 - G 71 -10 -3.23216 | CGCTACCATTATTAA GGCGAA TTC TTCGCC ACCGAACCTGGCTAA TERM 2270 2327470 - 2327453 - R 100 -12.7 -5.82172 | opp_overlap 2327453 AGGAATATAAAAAAA CGGCCTC AAAA GAGGCCG TTTTTAAAGGAGTCA TERM 2271 2327453 - 2327470 + r 100 -12.7 -4.57569 | opp_overlap 2327453 AGGAATATAAAAAAA CGGCCTC AAAA GAGGCCG TTTTTAAAGGAGTCA TERM 2272 2327501 - 2327482 - R 77 -10.8 -2.90496 | opp_overlap 2327486, overlap 2327479 GCCGTTTTTAAAGGA GTCAGGTA GCGC TACCTGAC TTACCATGTTGAAAC Patl_1921 2327930 - 2327535 - | hypothetical protein TERM 2273 2328153 - 2328180 + r 88 -11.5 -3.45054 | opp_overlap 2328153 2328152 2328151 2328155, overlap 2328158 ACAACGATGAAAAGC GACAAGCATAA CATTGT TTATGCTTGTC TTCTGAATTATAGCA TERM 2274 2328180 - 2328153 - R 79 -11.5 -2.52353 | opp_overlap 2328153 2328158, overlap 2328152 2328151 2328155 ACAACGATGAAAAGC GACAAGCATAA CATTGT TTATGCTTGTC TTCTGAATTATAGCA Patl_1922 2329391 - 2328219 - | phytanoyl-CoA dioxygenase TERM 2275 2328741 - 2328715 - G 74 -5.9 -4.58773 | opp_overlap 2328715 GCCATGAAATTAAAA CCATGAATTTG TGAAT CAAACTCAGGG TTGTCCCAATGGGTA Patl_1923 2329515 - 2330186 + | TetR family transcriptional regulator Patl_1924 2330428 - 2331174 + | hypothetical protein Patl_1925 2331263 - 2331676 + | hypothetical protein Patl_1926 2331753 - 2332709 + | hypothetical protein Patl_1927 2333946 - 2332720 - | major facilitator transporter TERM 2276 2333426 - 2333414 - G 71 -6.9 -4.16284 | ATACTTGCCAACAAA CCACC TAT GGCGG GGCCTAATATTGATC TERM 2277 2334005 - 2333976 - R 80 -10.1 -3.66646 | opp_overlap 2333971 AACACTGTATTTAAA GCGCTTTACACAT TGGA AAATGTAAAGCGC TGATAATATTACGAC Patl_1928 2335174 - 2334071 - | NADH:flavin oxidoreductase/NADH oxidase Patl_1929 2335886 - 2335266 - | TetR family transcriptional regulator TERM 2278 2335706 - 2335722 + g 72 -5.1 -4.62069 | opp_overlap 2335686 GCTGGCGCAGCGCTG CAAGGAT ATC AGCCTTG TTTTTAAAATAACGA TERM 2279 2335997 - 2335967 - R 75 -10 -3.22475 | opp_overlap 2335976, overlap 2335965 TTGACGCCCATAATA TATTTTATATTGAC ACT GTCAATTTAAAATA AAACACCCATAAGCC TERM 2280 2336741 - 2336756 + r 90 -10.4 -4.37971 | opp_overlap 2336741 ACGCTCAAAGAAAAA CCCGCT CAGA AGCGGG TTTTAATAATATTTT TERM 2281 2336756 - 2336741 - R 100 -10.4 -5.27938 | opp_overlap 2336741 ACGCTCAAAGAAAAA CCCGCT CAGA AGCGGG TTTTAATAATATTTT Patl_1930 2337062 - 2336793 - | RNA-binding region RNP-1 TERM 2282 2337198 - 2337222 + H 100 -7.9 -5.88565 | TCACTCCGAATTTGC GTGAGGTCATT GAA AAAGACTTCAC TTTTTTTGTTCTAGG TERM 2283 2337657 - 2337673 + H 74 -4.4 -4.86613 | TAGGAATGAGCAGCA CATCCT CACAA GGGATG TTTGTTTTCGTTTTC Patl_1931 2337720 - 2339606 + | thiamine biosynthesis protein ThiC Patl_1932 2339611 - 2340843 + | FAD dependent oxidoreductase Patl_1933 2340837 - 2341034 + | thiamine biosynthesis protein ThiS thiG 2341036 - 2341836 + | thiazole synthase Patl_1935 2341839 - 2343677 + | thiamine-phosphate pyrophosphorylase TERM 2284 2343864 - 2343846 - g 70 -9.6 -3.01924 | CAGGGGTCGGGAATA TCACCATC ATT GACGGTGA CAGCATTTCTCAAAC Patl_1936 2343674 - 2344897 + | UBA/THIF-type NAD/FAD binding fold Patl_1937 2345055 - 2345432 + | hypothetical protein TERM 2285 2345459 - 2345478 + F 82 -6.4 -4.90013 | gap 1 AACTCGTTTTTACCG GCGCATGCT AAA GGC-TGCGC TTTTTCATTGGCTTA Patl_1938 2346243 - 2349158 + | TonB-dependent receptor TERM 2286 2349183 - 2349210 + F 100 -15.6 -5.18355 | opp_overlap 2349178 2349177 AGTTTATAAGTGCAA GGCCCCTTAGCG ACAC CGCTAAAGGGCC TTTTTGGTTTTTGCG TERM 2287 2350765 - 2350753 - g 72 -9.1 -3.63922 | opp_overlap 2350752 2350751, overlap 2350751 ACTGGCCGCAAAACA GCCTG GCA CAGGC GATTTGTACAAAGAA Patl_1939 2349296 - 2350849 + | tryptophan halogenase Patl_1940 2351338 - 2354370 + | TonB-dependent receptor TERM 2288 2357462 - 2357478 + G 73 -9.5 -3.41527 | TAACATCGGCGCCCG TCAAACC CAA GGTTTGA TTGTGATGAGCATTG Patl_1941 2354466 - 2358818 + | alpha-1,6-glucosidases, pullulanase-type TERM 2289 2358886 - 2358868 - f 86 -8.9 -4.37711 | opp_overlap 2358868 CTAGCAAACTCAAAA CGCGATA TTTAT TATCGCG TTTTTTGTTTTTAGG TERM 2290 2358868 - 2358886 + F 100 -8.9 -5.93252 | opp_overlap 2358868 CTAGCAAACTCAAAA CGCGATA TTTAT TATCGCG TTTTTTGTTTTTAGG TERM 2291 2359157 - 2359147 - f 73 -6.8 -4.3014 | opp_overlap 2359146 2359147 ATATATTTAGGAAAA CGAC CCA GTCG CTCGTTTTTGTTCTT TERM 2292 2359288 - 2359276 - f 80 -6.2 -4.82901 | opp_overlap 2359277, overlap 2359277 GCGTCGGCAGAAAAA CGCG CAAAT CGCG CTATATTAAATTGTT Patl_1942 2359737 - 2360270 + | hypothetical protein Patl_1943 2361640 - 2360378 - | transposase, IS4 TERM 2293 2361196 - 2361180 - G 71 -9.5 -3.18023 | overlap 2361178 GGATTATGACTAACA GGTGAAT TGT ATTCACC GAACGAAAATACGCG TERM 2294 2361879 - 2361863 - g 78 -6.5 -4.61231 | TTACACCGGTAAAAA TAGAGGC ATT GCCACTA GAATGCGAACAGTAA Patl_1944 2361714 - 2362145 + | hypothetical protein Patl_1945 2363523 - 2362261 - | transposase, IS4 Patl_1946 2363610 - 2363864 + | hypothetical protein Patl_1947 2363952 - 2364404 + | hypothetical protein Patl_1948 2365519 - 2364536 - | hypothetical protein TERM 2295 2364888 - 2364899 + g 71 -3.6 -4.78107 | TGTTGGTTTTTAATG GCGT GAAT GCGC TTTTTGATACTGGTG Patl_1949 2366236 - 2365562 - | putative transposase TERM 2296 2365792 - 2365776 - G 71 -9.5 -3.18023 | overlap 2365774 GGATTATGACTAACA GGTGAAT TGT ATTCACC GAATGAAAATACGCG TERM 2297 2366456 - 2366475 + r 74 -5 -4.66833 | overlap 2366458 CTTACTCTACTTCAT TTTCCGAG AGAA CTTGGAGA TTTTTGCGCTTAAAA TERM 2298 2366754 - 2366730 - R 76 -7.1 -4.21462 | opp_overlap 2366721 2366729 2366734, overlap 2366732 AGTTATGAGGTAAAA GAGACCTCTCT TCA AGAGGGGTCTG GTGAGTTTTATTCTA TERM 2299 2366752 - 2366732 - R 79 -9.7 -3.70674 | opp_overlap 2366721 2366729 2366734, overlap 2366730 TTATGAGGTAAAAGA GACCTCTCT TCA AGAGGGGTC TGGTGAGTTTTATTC Patl_1950 2367846 - 2366890 - | transposase IS116/IS110/IS902 TERM 2300 2368513 - 2368523 + H 73 -5.4 -4.58395 | opp_overlap 2368508, overlap 2368508 2368507 TGGCTAATAAGAGGG CAAC CTC GTTG TTTTTAAAACGTGGC Patl_1951 2368697 - 2369143 + | hypothetical protein Patl_1952 2369226 - 2369747 + | hypothetical protein Patl_1953 2370584 - 2371141 + | hypothetical protein TERM 2301 2371209 - 2371197 - T 74 -9.1 -3.52162 | opp_overlap 2371196 2371208, overlap 2371172 2371171 2371195 2371193 TGCATATAAAACACA CGAGC AAC GCTCG GTCATCTTTATGAGA Patl_1954 2371584 - 2371246 - | hypothetical protein TERM 2302 2371794 - 2371766 - H 87 -5.2 -5.42975 | overlap 2371767 TCACATAAAGAAAAA CGGCAGTCACGA AAGAA TCGTAACAGCCC ATACCTGATCGGGTA TERM 2303 2371793 - 2371767 - H 77 -8.7 -3.84158 | overlap 2371766 CACATAAAGAAAAAC GGCAGTCACGA AAGAA TCGTAACAGCC CATACCTGATCGGGT Patl_1955 2371941 - 2372099 + | hypothetical protein TERM 2304 2372449 - 2372480 + G 70 -5.2 -4.48072 | gap 1, overlap 2372450 ACCTAGCGCCGCGAA TTGT-TGGTATCGCC AAA GGCGATACAGTACAG TTTTATGGTGAATAT Patl_1956 2372202 - 2372597 + | hypothetical protein Patl_1957 2374013 - 2372742 - | amine oxidase TERM 2305 2372855 - 2372841 - G 75 -10 -3.53091 | opp_overlap 2372835 ATCCTGTTGGGCAAA CTCGCT ACC AGCGAG ATGCAATTTAAGCGT TERM 2306 2373750 - 2373766 + g 79 -4.4 -5.1861 | gap 1 CTTAACATCCAACTT TGC-GGC TAGG GCCTGCA TTTTTTGCTGATGAG TERM 2307 2374631 - 2374641 + G 83 -2.4 -5.80817 | opp_overlap 2374631 TTGGTGGGTGAAAAC CCTG AGC CTGG TTTTTTTGTGTTGGG Patl_1958 2374217 - 2374837 + | hypothetical protein TERM 2308 2374973 - 2374944 - T 79 -10.1 -3.55084 | gap 1, opp_overlap 2374943, overlap 2374942 TGTGAATATCAAATA GGCAGTGAAC-ACA TGG TGTTGGTCACTGCC GTCATCTGCCGTGAT Patl_1959 2375868 - 2375086 - | hypothetical protein TERM 2309 2375497 - 2375515 + g 74 -3.8 -5.06451 | TTTATGGTTTTCTGT TACTGCAT CTT GTGCTGTA TTTTTTAGGGTCGTG Patl_1960 2376801 - 2376031 - | IclR family transcriptional regulator TERM 2310 2376929 - 2376887 - H 71 -5.2 -4.55997 | opp_overlap 2376893 ATACACAACAATAAA TTAACATTCATATTTAAATA TTA TATTTTTATATGAATTTTAA CTTGCGTTTATGTTG TERM 2311 2377140 - 2377115 - g 91 -7.7 -5.18726 | overlap 2377116 2377123 CGTTTACAAGAAAAA GCATTTAACGA TGAT TCGTTAAATGA TCGAGCATGGCACAA TERM 2312 2377139 - 2377116 - g 86 -11.2 -3.70512 | overlap 2377115 2377123 GTTTACAAGAAAAAG CATTTAACGA TGAT TCGTTAAATG ATCGAGCATGGCACA Patl_1961 2377004 - 2377786 + | phytanoyl-CoA dioxygenase TERM 2313 2377836 - 2377824 - g 72 -4.7 -4.56093 | opp_overlap 2377824, overlap 2377825 AATTTAATCACAAAA GCCCC CAA GGGGA TAAGTTGCAATCAGG Patl_1962 2377787 - 2378914 + | peptidylglycine monooxygenase-like TERM 2314 2378962 - 2378975 + T 86 -9.5 -3.97088 | opp_overlap 2378962 ATTTACCATGGAAGA CCCGC TCTT GCGGG TTTAATGTTCTAGGC TERM 2315 2378975 - 2378962 - T 73 -9.5 -3.10975 | opp_overlap 2378962 ATTTACCATGGAAGA CCCGC TCTT GCGGG TTTAATGTTCTAGGC Patl_1963 2379912 - 2379175 - | SapC TERM 2316 2379555 - 2379568 + g 72 -8.1 -3.66844 | GGTCTATGGCTAAGT GCCCA GAGG TGGGC TTGTTGCCCTGTCCC Patl_1964 2381560 - 2379965 - | tryptophan halogenase TERM 2317 2380010 - 2380024 + g 72 -5.7 -4.50627 | CTTGTTGATCAACGC GCGAT TGCTT ATCGC TTTGTTTGATAGCTG TERM 2318 2381673 - 2381649 - R 100 -10.8 -5.33405 | opp_overlap 2381649 GGCAGTAAATAAAAA GCCCCATGAA AAATA TTCATAGGGC TTTAATAGAGCGTAC TERM 2319 2381649 - 2381673 + r 73 -8.6 -3.73224 | opp_overlap 2381649 GGCAGTAAATAAAAA GCCCCATGAA AAATA TTCATAGGGC TTTAATAGAGCGTAC Patl_1965 2383843 - 2381708 - | hypothetical protein TERM 2320 2382498 - 2382511 + g 70 -2.4 -4.99056 | opp_overlap 2382498 TCATTGTTTAGCCAA TACG ACATAG CGTA TTTTTGATTGTCTTC Patl_1966 2387639 - 2383917 - | TonB-dependent receptor TERM 2321 2387545 - 2387528 - G 78 -5.5 -4.8667 | opp_overlap 2387528 TAGATGCCATAAAAA GCGCAAT TGAG ATAGCGC TTAATTTAAAGGGTG TERM 2322 2387836 - 2387851 + r 70 -3.2 -4.85782 | CTAATCAATGGCTTA CGCGTT ATTA AAAGCG TTTATTTTTAGAGGG TERM 2323 2388055 - 2388033 - R 70 -9.3 -3.15726 | opp_overlap 2388031, overlap 2388031 AAAAATCAGTCAACA TTCGTGTTT GAATT AAACACGAA GCGTTCATACCATAC TERM 2324 2388240 - 2388222 - R 70 -8.1 -3.64866 | opp_overlap 2388239 AGACTAGATTTTAAA CGTCCCG TTTAG CGAGACG AATCATTCGTGTGAT Patl_1967 2388786 - 2388517 - | hypothetical protein Patl_1968 2389986 - 2388901 - | hypothetical protein TERM 2325 2389945 - 2389961 + g 72 -3 -4.96773 | gap 1, overlap 2389935 2389948 GCCTCGCTCGATAGC GCGCTTG GTGG CAAG-GC TTTGTTTTTGCTTAG Patl_1969 2390981 - 2390025 - | PfkB Patl_1970 2392572 - 2390983 - | sugar transporter TERM 2326 2391687 - 2391673 - G 74 -5.6 -4.57341 | AAGTGCTTGGAAAAA GGCAGC ATT GGTGCC CAAACCGACTTGCTC TERM 2327 2391802 - 2391813 + g 72 -5.8 -4.4715 | TTTACGCATTTTGCT GCCA AACA TGGC TTTTATGGCTTCAGC TERM 2328 2392415 - 2392401 - G 72 -2.8 -4.94058 | GTAACGCAAATAAAA CACC GAAACCA GGTG CACTGACCACAGCCC TERM 2329 2393257 - 2393247 - g 74 -6.8 -4.27886 | opp_overlap 2393249 GGTTAAATACACAAA TGCC AGC GGCA CCGTGGTTGGTACAT TERM 2330 2393533 - 2393513 - g 89 -8.9 -4.68593 | CTTATTATGCAAAAA TGGCGGGGC ACG ACCTCGCCA AATCAATCAGTGACG TERM 2331 2394156 - 2394167 + G 72 -5.8 -4.41548 | CGTTGCTGACAGTGC CGTG CCAT CACG TTTTGTAGCATCTGA TERM 2332 2394611 - 2394600 - g 78 -5.8 -4.82333 | opp_overlap 2394600 2394603, overlap 2394589 ACAAGAAGTGAAAAA CACC CCTT GGTG CGTGGGTGTATTTAT Patl_1971 2393044 - 2395425 + | agarase TERM 2333 2395465 - 2395438 - f 90 -12.7 -3.59247 | opp_overlap 2395440, overlap 2395429 2395440 TAATAACCCTTTAAA GAGCGCGCAGC TCCTTG GCTGCGCGCTT TAAGGCAAGTATCGA TERM 2334 2395440 - 2395463 + F 100 -16 -3.54129 | opp_overlap 2395438 2395429 2395440 ATAACCCTTTAAAGA GCGCGCAGCT CCTT GGCTGCGCGC TTTAAGGCAAGTATC TERM 2335 2395463 - 2395440 - f 100 -15.3 -3.36837 | opp_overlap 2395440, overlap 2395438 2395429 ATAACCCTTTAAAGA GCGCGCAGC TCCTTG GCTGCGCGC TTTAAGGCAAGTATC TERM 2336 2396295 - 2396278 - g 77 -6.9 -4.37886 | TTACCGTGCAGAAAA CTTGGGG GAAA CCCCTAG CATAGAATACACGAC Patl_1972 2395790 - 2396323 + | prepilin-type cleavage/methylation TERM 2337 2396845 - 2396830 - g 78 -5.4 -4.75309 | TCAAAGCCAACAAAA TCAAGC GTGT GCCTGA GAACGCTTTACCCAT Patl_1973 2396475 - 2397740 + | serine/threonine protein kinase Patl_1974 2397937 - 2397767 - | hypothetical protein Patl_1975 2398166 - 2400427 + | catalase/peroxidase HPI TERM 2338 2400507 - 2400485 - T 90 -9.2 -4.94972 | opp_overlap 2400485 CATCACAAGTAAAAA GGCCAGAT GTATATT ATCTGGCC TTTTTTATTTGACCT TERM 2339 2400485 - 2400507 + T 100 -9.9 -5.64421 | opp_overlap 2400485 CATCACAAGTAAAAA GGCCAGATG TATAT TATCTGGCC TTTTTTATTTGACCT TERM 2340 2400569 - 2400549 - T 83 -7.5 -4.7908 | AAAAATATAAATAAA GGCTTAACG CGC CGTCCAGCC GCCGTCTATAACGAT Patl_1976 2401337 - 2400552 - | 3-hydroxybutyrate dehydrogenase Patl_1977 2402443 - 2401334 - | polyhydroxybutyrate depolymerase Patl_1978 2403672 - 2402470 - | homoserine O-acetyltransferase TERM 2341 2402777 - 2402790 + g 79 -3.1 -5.41746 | gap 1, opp_overlap 2402774, overlap 2402774 TCCATCAATTTAGCT CG-GCT TTG AGCTCG TTTTTTTAACCACTT TERM 2342 2403003 - 2403015 + g 78 -5.5 -4.82901 | TGGCGTCCAGTTGAA TGGGT ATT GCCCA TTTTTCTAGCAAGGC Patl_1979 2404999 - 2403704 - | citrate transporter TERM 2343 2404141 - 2404157 + g 72 -6.5 -4.29325 | opp_overlap 2404131 CCAAAGCACCTGTAG TGCCAGC GGT GATGGCA TTTTGCATATTCATA Patl_1980 2405193 - 2407517 + | TonB-dependent receptor TERM 2344 2407628 - 2407643 + F 93 -9 -5.21709 | ATGGTAATGACGTTT GGCAGT GAAA ACTGCC TTTTTTCGTCTAGGC Patl_1981 2407827 - 2408468 + | two component LuxR family transcriptional regulator TERM 2345 2408508 - 2408491 - T 95 -11.3 -5.0538 | opp_overlap 2408490 2408491 CGGTAGCGTAAAAAA GCCGGTA ATGT TACCGGC CTTCTGCACATAATG TERM 2346 2408491 - 2408508 + T 79 -11.3 -2.58861 | opp_overlap 2408491, overlap 2408490 CGGTAGCGTAAAAAA GCCGGTA ATGT TACCGGC CTTCTGCACATAATG TERM 2347 2408566 - 2408587 + T 86 -9.5 -4.13654 | overlap 2408581 2408584 GGTAGCTTAGACTCA TCATTGCTG TTCT CAGCAGTGA TTTCTGCTTTAGCAA Patl_1982 2410403 - 2408544 - | sodium/hydrogen exchanger TERM 2348 2408584 - 2408606 + g 74 -3.4 -4.98522 | overlap 2408566 2408581 TTGCTGTTCTCAGCA GTGATTTCTG CTT TAGCAATCGC TTTTTCTATCGGCTT TERM 2349 2408807 - 2408786 - G 71 -10.2 -2.75066 | opp_overlap 2408777 2408776 2408774 2408786, overlap 2408777 2408776 2408785 AAGAATCCGTTAAAC GGGTCGTT TTAATT AACGACCC TTTTGCTACCAAGCC TERM 2350 2408786 - 2408807 + g 90 -10.2 -4.25104 | opp_overlap 2408777 2408776 2408785 2408786, overlap 2408777 2408776 2408774 AAGAATCCGTTAAAC GGGTCGTT TTAATT AACGACCC TTTTGCTACCAAGCC TERM 2351 2409224 - 2409211 - G 79 -3.1 -5.27779 | gap 1, overlap 2409190 2409212 CCGAAGATTAAAAAA CCGTGC GGG GCA-GG TGCGCGCATATCAAG TERM 2352 2409377 - 2409367 - G 73 -4.6 -4.78077 | opp_overlap 2409374, overlap 2409370 2409374 TTTAATGAAAACAAA GCAG ATA CCGC TGCTGCAACGATGCC TERM 2353 2411067 - 2411088 + G 82 -7.3 -4.89477 | TGGTTTATTATGGTT TGTAGTTGG TAAG CCAGCTGCA TTTTATTCTTCAAAC Patl_1983 2410879 - 2411313 + | hypothetical protein Patl_1984 2411631 - 2411329 - | ISCps7, transposase Patl_1985 2415420 - 2412004 - | multi-sensor hybrid histidine kinase TERM 2354 2412800 - 2412811 + g 86 -3 -5.7946 | opp_overlap 2412785 2412800, overlap 2412789 2412785 TTAGCGCGTACATAA GTTA CGCG TAAC TTTTTTTGTTCCGCA TERM 2355 2413776 - 2413747 - G 75 -10.1 -3.52192 | gap 1, opp_overlap 2413750, overlap 2413750 TTCAATGGTAGATAA CAGCTTG-GGGCTA GCG TAGCCCGCAAGTTG TACTGGAGTCAGTTT TERM 2356 2413750 - 2413773 + g 77 -10.4 -3.41602 | gap 1, opp_overlap 2413747 2413750 AATGGTAGATAACAG CTTG-GGGCTA GCG TAGCCCGCAAG TTGTACTGGAGTCAG TERM 2357 2413773 - 2413750 - G 71 -10.4 -2.59565 | gap 1, opp_overlap 2413750, overlap 2413747 AATGGTAGATAACAG CTTG-GGGCTA GCG TAGCCCGCAAG TTGTACTGGAGTCAG TERM 2358 2415542 - 2415528 - H 78 -4.2 -5.19916 | AAAACATCGAAAAAA GACCCT TGA AGAGCC TTAAAGCAACCCCAT Patl_1986 2415612 - 2416226 + | GrpE protein TERM 2359 2417355 - 2417371 + G 79 -8.1 -4.28994 | TGACTTATCAGTAGG TGATATC AAC GATATCA TTTTGGTCGGTGGTC Patl_1987 2416360 - 2418279 + | chaperone protein DnaK TERM 2360 2418323 - 2418364 + F 90 -12.4 -3.75169 | gap 1, overlap 2418289 2418327 TCAACGACGTTAGGG CAAGCTCGGGCGC-ATGGA GTTAA TTCATAGCGCCCGCGTTTG TTTCATAACCTCATG TERM 2361 2418327 - 2418360 + F 91 -9.6 -4.49958 | gap 1, overlap 2418289 2418323 CGACGTTAGGGCAAG CTCGGGCGC-ATGGA GTTAA TTCATAGCGCCCGCG TTTGTTTCATAACCT Patl_1988 2418479 - 2419618 + | chaperone protein DnaJ TERM 2362 2419679 - 2419664 - f 79 -10.4 -3.55761 | opp_overlap 2419664 TAGTCATTGTTGAAA GCCGCT GTAA AGCGGC TTTTTTATACCTGCT TERM 2363 2419664 - 2419679 + F 100 -10.4 -5.28778 | opp_overlap 2419664 TAGTCATTGTTGAAA GCCGCT GTAA AGCGGC TTTTTTATACCTGCT Patl_1989 2419975 - 2420442 + | cytochrome c, class II TERM 2364 2420480 - 2420467 - f 75 -9.5 -3.41051 | opp_overlap 2420467 GTATTCTGACTAGAA GGCGC TGCG GCGCC TTTTCTGTTTTTTAC TERM 2365 2420467 - 2420480 + F 93 -9.5 -5.06052 | opp_overlap 2420467 GTATTCTGACTAGAA GGCGC TGCG GCGCC TTTTCTGTTTTTTAC Patl_1990 2420721 - 2421185 + | putative GAF sensor protein Patl_1991 2421182 - 2421469 + | hypothetical protein TERM 2366 2421840 - 2421830 - g 81 -8.2 -4.52703 | overlap 2421837 2421838 GAAAGTAGCAGAAAA GCGC AAA GCGC AGAATGCTGCCAAGC Patl_1992 2421492 - 2422142 + | putative solute/DNA competence effector Patl_1993 2422147 - 2424186 + | carboxy-terminal protease TERM 2367 2424204 - 2424224 + F 100 -12.6 -5.7827 | opp_overlap 2424200 GTAAAACGATATCGA GGGGCTAG TAAAT CTAGCCCC TTTTTTGTTTGTGTT Patl_1994 2424388 - 2425734 + | sodium:neurotransmitter symporter Patl_1995 2425734 - 2427254 + | Na+/H+ antiporter NhaC TERM 2368 2427511 - 2427457 - g 81 -5.1 -5.1287 | gap 1, overlap 2427459 TCGACATTCAAAAAA CACGGGTAATTACTACCTGCCAATTC AGCC GAAATGGCAAGCA-CAATCGCCCGTT AGTGTTAGACGGTGA TERM 2369 2427509 - 2427459 - g 73 -7.7 -4.19215 | gap 1, overlap 2427457 GACATTCAAAAAACA CGGGTAATTACTACCTGCCAATTC AGCC GAAATGGCAAGCA-CAATCGCCCG TTAGTGTTAGACGGT TERM 2370 2427680 - 2427670 - g 87 -6.8 -5.13722 | opp_overlap 2427669 2427665 2427670 CTGAGGAAAATAAAA CCCT GGA AGGG CTGTATTTTTCTGCC Patl_1996 2427354 - 2429978 + | aminopeptidase N Patl_1997 2429978 - 2430199 + | hypothetical protein TERM 2371 2430869 - 2430855 - g 79 -8.6 -4.24948 | opp_overlap 2430855 2430854 2430857 CGATTACAGGTAAAA CACAAG ACC CTTGTG CTTCGTCTACCGCTA Patl_1998 2430380 - 2432446 + | hypothetical protein TERM 2372 2432673 - 2432661 - g 73 -7.7 -4.06419 | GCGGGTTATAAAGAA GGTGA TTT TCACC CTGACCCATATGCTG Patl_1999 2432457 - 2433824 + | hypothetical protein TERM 2373 2433830 - 2433861 + F 93 -10.2 -4.82901 | opp_overlap 2433836, overlap 2433820 2433831 2433836 TAGACGCTAATCGAG AAAAAACGGTTGGC CTTT GCCAACCGTTTTCA TTTTTATGGAACCCA TERM 2374 2433831 - 2433860 + F 95 -13.7 -3.49419 | opp_overlap 2433836, overlap 2433820 2433830 2433836 AGACGCTAATCGAGA AAAAACGGTTGGC CTTT GCCAACCGTTTTC ATTTTTATGGAACCC TERM 2375 2433836 - 2433855 + F 100 -13.6 -4.82678 | opp_overlap 2433836, overlap 2433820 2433831 2433830 CTAATCGAGAAAAAA CGGTTGGC CTTT GCCAACCG TTTTCATTTTTATGG TERM 2376 2433855 - 2433836 - f 100 -13.6 -5.31456 | opp_overlap 2433820 2433836 2433831 2433830 CTAATCGAGAAAAAA CGGTTGGC CTTT GCCAACCG TTTTCATTTTTATGG TERM 2377 2434243 - 2434228 - g 71 -6.8 -4.02817 | opp_overlap 2434228 GCTCCAGAACAAGAA CGCCCA TTGT TGGACG TTGTCTTTTTCAATG TERM 2378 2434279 - 2434293 + G 80 -7 -4.58395 | overlap 2434280 GAGGGCATTGCGATT GGCGCC TAT GGCGCG TTTTTGCGCACTGAA TERM 2379 2434280 - 2434292 + G 77 -10.5 -3.34716 | overlap 2434279 AGGGCATTGCGATTG GCGCC TAT GGCGC GTTTTTGCGCACTGA Patl_2000 2433883 - 2434881 + | BNR repeat-containing protein Patl_2001 2434888 - 2437203 + | hypothetical protein TERM 2380 2437238 - 2437249 + F 100 -7.2 -5.80817 | opp_overlap 2437238, overlap 2437231 AATTTGCATAAAAAA GGCC GTAA GGCC TTTTTTTATGTTCGA TERM 2381 2437249 - 2437238 - f 90 -7.2 -5.25803 | opp_overlap 2437231 2437238 AATTTGCATAAAAAA GGCC GTAA GGCC TTTTTTTATGTTCGA TERM 2382 2440602 - 2440586 - g 95 -12.3 -4.07568 | opp_overlap 2440585 2440582 GCGTTTGTTCGAAAA CCCATCC TTG GGATGGG ATGATTATGATAAGT TERM 2383 2440704 - 2440692 - g 81 -3.4 -5.37593 | overlap 2440694 GCTGAAATGAAAAAA TGGT TAGGG ACCA AACAACAAACCATGA TERM 2384 2441972 - 2441990 + G 70 -9 -3.4149 | opp_overlap 2441976, overlap 2441976 AGAAGGTCGCAGTAT TAAATTGG TGG CCAATTTA TATTTCAAATTAGGT Patl_2002 2437488 - 2442326 + | NAD-glutamate dehydrogenase TERM 2385 2442349 - 2442368 + F 100 -11.4 -6.02914 | opp_overlap 2442348 2442349 CGTACGGTCTATAAT GCCCTGGT GATA ACCGGGGC TTTTTTTTGTCTAAG TERM 2386 2442604 - 2442594 - g 72 -3.2 -4.9725 | opp_overlap 2442601 AGGGCTAGATAAAAA CGCA GAG TGCA TTGATGCATTTGCCG Patl_2003 2442397 - 2443404 + | dihydroorotate dehydrogenase TERM 2387 2443412 - 2443423 + F 81 -7.2 -4.55295 | opp_overlap 2443406 2443412, overlap 2443405 CGTTATAATGATCAA GGCG TGAT CGCC TTTCTTTATCACAAA Patl_2004 2443520 - 2444056 + | hypothetical protein TERM 2388 2445022 - 2445010 - g 74 -3.3 -4.92385 | GATAGCGAAAGAAAA TGCGG ATG CAGCA GGGGTTTTCTCTGGG Patl_2005 2444192 - 2446297 + | 23S rRNA m(2)G2445 methyltransferase Patl_2006 2446484 - 2448427 + | ABC transporter related Patl_2007 2448458 - 2450155 + | hypothetical protein TERM 2389 2450177 - 2450193 + F 100 -10.8 -5.29782 | overlap 2450191 ATACACCTCTGTGAA GCCCGC ATCTA GCGGGC TTTTTTATGCCTATA Patl_2008 2450420 - 2450593 + | ribosome modulation factor TERM 2390 2450603 - 2450616 + T 89 -9.5 -4.208 | CTCTAGTCAATTTTA GCCCC TAAT GGGGC TTTATCATTTTAACG TERM 2391 2450663 - 2450645 - T 100 -10.3 -5.4833 | opp_overlap 2450644 2450643 CGAGGCAATAAAAAA GCGCGTT ATATA AACGCGC AATTTAGAGGCACAG Patl_2009 2451218 - 2450700 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Patl_2010 2451353 - 2451622 + | hypothetical protein TERM 2392 2451917 - 2451932 + T 76 -3.3 -5.28414 | GCATTAATATTAGGT GTGTT AAAGAC AACAC TTTTTATATTTCTTA Patl_2011 2452396 - 2451920 - | SecC motif-containing protein Patl_2012 2452988 - 2452605 - | hypothetical protein Patl_2013 2453703 - 2453056 - | ferric reductase-like transmembrane component-like Patl_2014 2454701 - 2453703 - | putative sulfite oxidase subunit YedY TERM 2393 2454566 - 2454555 - G 74 -5.8 -4.68593 | opp_overlap 2454556, overlap 2454556 GTCACCACCGAAAAA GCTC GCAC GAGC GGGTGTGCTGGTAAG Patl_2015 2456192 - 2454789 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein Patl_2016 2457040 - 2456213 - | hypothetical protein TERM 2394 2456756 - 2456746 - G 82 -5.4 -5.18726 | opp_overlap 2456746 2456744, overlap 2456740 TGGTGAGAAGAAAAA CGAT CGC ATCG TATTTCTGAAGATTT Patl_2017 2457604 - 2457170 - | putative phosphohydrolase TERM 2395 2457467 - 2457477 + g 82 -5.4 -5.17054 | CATATCAATCAATTT TTGC TCA GCAA TTTTTTCAATCTTCT TERM 2396 2457844 - 2457857 + r 77 -5.3 -4.8384 | CAAACGATCACCTAT CAGAT TCCG ATCTG TTTTTAAGTTGTTTC Patl_2018 2458087 - 2457836 - | XRE family transcriptional regulator TERM 2397 2458759 - 2458776 + r 71 -6.9 -4.09511 | opp_overlap 2458758 2458757 AGGGGAATAAATATC TCGGCCG CAGG CGACCGA TTTTCAAGAACTGTT Patl_2019 2459800 - 2458967 - | metal dependent phosphohydrolase Patl_2020 2461440 - 2460187 - | hypothetical protein Patl_2021 2462561 - 2461443 - | hypothetical protein TERM 2398 2462305 - 2462320 + g 76 -4 -5.0065 | gap 1 GTGCGACTAATTCCT GC-TTGC TCA GCAACGC TTTTCTTTGTCAGTA Patl_2022 2464506 - 2462554 - | phage integrase TERM 2399 2462662 - 2462683 + g 70 -5.2 -4.43511 | ATAAGACACGACACG CTTATCTG CATCTA CAGGTAAG TATTTTTGTTTTTGC Patl_2023 2466335 - 2464506 - | hypothetical protein Patl_2024 2467589 - 2467200 - | MerR family transcriptional regulator Patl_2025 2467671 - 2468306 + | cation efflux protein Patl_2026 2468303 - 2468662 + | hypothetical protein Patl_2027 2468655 - 2469539 + | cation diffusion facilitator family transporter Patl_2028 2469627 - 2470022 + | hypothetical protein TERM 2400 2470045 - 2470062 + F 75 -9.9 -3.35531 | opp_overlap 2470035, overlap 2470044 CTAATCAAACACCGT TCGCCAA CAAC TTGGCGA TATATATTTTTGATA Patl_2029 2470148 - 2471416 + | outer membrane efflux protein TERM 2401 2471602 - 2471585 - g 83 -4.1 -5.42259 | overlap 2471594 GTATGGCGAAAAAAA TGGGAGT AATG ACTCACA GTGTCATCGCGGGAC TERM 2402 2471760 - 2471746 - g 78 -5.6 -4.7339 | opp_overlap 2471745, overlap 2471747 AACAAAGTTGAAAAA GGCCAG ACA CTGGCA ATCGTTGAATCCAAC TERM 2403 2471759 - 2471747 - g 70 -9.1 -3.42407 | opp_overlap 2471745, overlap 2471746 ACAAAGTTGAAAAAG GCCAG ACA CTGGC AATCGTTGAATCCAA Patl_2030 2471413 - 2472351 + | biotin/lipoyl attachment Patl_2031 2472405 - 2475518 + | CzcA family heavy metal efflux protein TERM 2404 2475504 - 2475518 + T 73 -8.6 -3.61715 | opp_overlap 2475504 GTAATGCATTCGAAA TCACAC AAA GTGTGA TTGTTAAGCACCGTA TERM 2405 2475518 - 2475504 - T 73 -8.6 -3.6215 | opp_overlap 2475504 GTAATGCATTCGAAA TCACAC AAA GTGTGA TTGTTAAGCACCGTA TERM 2406 2475524 - 2475553 + T 77 -10.1 -3.26947 | opp_overlap 2475529, overlap 2475526 CAAAGTGTGATTGTT AAGCACCGTATTT AAGA AGATACGGTGCTC TTCGTCTGGAAATTC TERM 2407 2475526 - 2475551 + T 85 -12.7 -3.1978 | opp_overlap 2475529, overlap 2475524 AAGTGTGATTGTTAA GCACCGTATTT AAGA AGATACGGTGC TCTTCGTCTGGAAAT Patl_2032 2476644 - 2476051 - | hypothetical protein Patl_2033 2476973 - 2476647 - | putative alpha helix protein Patl_2034 2478199 - 2476970 - | aminotransferase AlaT TERM 2408 2477467 - 2477477 + g 74 -5.4 -4.56597 | CAGCGCGAAAACCGG CTAC TCT GTAG TTTTTGGACAGGCCA Patl_2035 2478525 - 2479319 + | putative cytochrome c oxidase, subunit I Patl_2036 2479780 - 2480976 + | 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) Patl_2037 2480969 - 2481946 + | transketolase, central region Patl_2038 2481970 - 2483637 + | dihydrolipoamide acetyltransferase TERM 2409 2483681 - 2483703 + F 95 -11.3 -4.87291 | opp_overlap 2483680 2483679 2483684, overlap 2483685 GAAAATGGCCAAACC CAAGCCCGC TACAT GCGGGTTTG TTTTTGCTTAACGTC TERM 2410 2483685 - 2483699 + F 90 -8.5 -4.96773 | opp_overlap 2483684 2483680 2483679, overlap 2483681 ATGGCCAAACCCAAG CCCGC TACAT GCGGG TTTGTTTTTGCTTAA Patl_2039 2483805 - 2484686 + | hypothetical protein Patl_2040 2484711 - 2486561 + | serine/threonine protein kinase Patl_2041 2486604 - 2487458 + | palmitoyl-CoA hydrolase TERM 2411 2487933 - 2487919 - g 73 -4.2 -4.84359 | TGATCCTCAGAAAAA GATGCT TGA AGCCTC TGGTCAACATTATGT Patl_2042 2487473 - 2488000 + | hexapaptide repeat-containing transferase TERM 2412 2488041 - 2488013 - f 100 -11.2 -5.74122 | gap 1 TAGCAGACAAAAAAA TGCTCGGATCGTA AGGA TA-GATCCGAGCA GAGGGTATGGCTCAT Patl_2043 2488370 - 2489497 + | Serine--pyruvate transaminase TERM 2413 2489543 - 2489515 - T 71 -7.4 -3.82218 | opp_overlap 2489515 ACCCAGACGACTAAA TATGCGTGGCCT TACTC AGGGCGCGCATA TTCATCATCACTTCC TERM 2414 2489515 - 2489543 + T 73 -9.6 -3.2327 | opp_overlap 2489515 ACCCAGACGACTAAA TATGCGTGGCCT TACTC AGGGCGCGCATA TTCATCATCACTTCC Patl_2044 2490419 - 2489583 - | hypothetical protein TERM 2415 2490688 - 2490705 + H 73 -7.1 -4.08546 | overlap 2490681 TATAGAGTTGACTTA TACTTGA TTGA TCAAGTA TTTGTCATTCATCGT TERM 2416 2490748 - 2490762 + H 88 -8.6 -4.74103 | opp_overlap 2490734 AGTATTCGTCTAGGG GTACTC AAC GAGTAC TTTTTCAATTGGAGA TERM 2417 2491061 - 2491080 + G 72 -9.4 -3.53444 | AATCGAGATGCACGG GTCAGTTT AGTT AAACTGAC TTTCACAGGGCGTGA Patl_2045 2490785 - 2491207 + | MarR family transcriptional regulator Patl_2046 2491280 - 2492755 + | ABC transporter related Patl_2047 2492934 - 2493488 + | GCN5-related N-acetyltransferase TERM 2418 2494206 - 2494186 - g 77 -6.9 -4.37886 | opp_overlap 2494198, overlap 2494198 TGAGCGCTTAGAAAA CCCAGTA GACAAGG TACTGGG CACCTATTTTCATCA Patl_2048 2493650 - 2494570 + | glutaminase TERM 2419 2494973 - 2495013 + G 75 -11.4 -3.07935 | AGACCAGCGCAACCC TGCCAAGCCA-CGAGAGTGA ATT TGACT-TCGCTGGCTTGGCA TTAGGTGAATCACAT Patl_2049 2494675 - 2495292 + | hypothetical protein Patl_2050 2495329 - 2495640 + | DSBH domain-containing protein Patl_2051 2496922 - 2495696 - | allantoate amidohydrolase Patl_2052 2498142 - 2496922 - | aminotransferase, class V Patl_2053 2499030 - 2498206 - | hypothetical protein TERM 2420 2498464 - 2498479 + g 74 -10.4 -3.29144 | overlap 2498466 CAGGCCAATCGCAGC GGCCGT GCCC ACGGCC TTGTGGGCAGGATAA Patl_2054 2500675 - 2499089 - | gamma-glutamyltransferase Patl_2055 2501895 - 2500678 - | amidase fumC 2503655 - 2502246 - | fumarate hydratase Patl_2057 2504617 - 2503799 - | RpiR family transcriptional regulator Patl_2058 2504938 - 2505666 + | NAD-dependent deacetylase TERM 2421 2506188 - 2506208 + G 73 -7.6 -4.16284 | gap 1 TTGTCATATTTACTT GGCACGCGA AAAG TC-CGTGCC TTTATTCGCCAATAT Patl_2059 2505657 - 2506292 + | lysine exporter protein LysE/YggA Patl_2060 2506396 - 2507139 + | hypothetical protein Patl_2061 2507132 - 2507992 + | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase TERM 2422 2508407 - 2508396 - g 70 -2.2 -5.02476 | AGAGTGGCTAAAAAA GCAA TATA CTGC TGACGAACTAGCAAC Patl_2062 2507989 - 2508660 + | hypothetical protein Patl_2063 2509863 - 2508880 - | patatin Patl_2064 2510830 - 2509874 - | PP-loop superfamily ATPase TERM 2423 2510114 - 2510126 + g 78 -6.3 -4.63218 | CATTAGTTTGACTTG CTTAC GTT GTAAG TTTTCTTGAGAGCCG Patl_2065 2512119 - 2511184 - | universal stress protein UspE Patl_2066 2512944 - 2512282 - | integral membrane protein Patl_2067 2513179 - 2512931 - | cytochrome oxidase maturation protein, cbb3-type Patl_2068 2515572 - 2513197 - | heavy metal translocating P-type ATPase TERM 2424 2513971 - 2513995 + g 75 -9.5 -3.58726 | opp_overlap 2513971 2513970, overlap 2513973 AGCGTACATAAGAAG TGTTTCATCAT CGA ATGATGAAATA TTATGTATGGCCGCC TERM 2425 2513973 - 2513993 + g 73 -9.9 -3.37198 | opp_overlap 2513971 2513970, overlap 2513971 CGTACATAAGAAGTG TTTCATCAT CGA ATGATGAAA TATTATGTATGGCCG TERM 2426 2514291 - 2514268 - G 91 -7.4 -5.1287 | GCCAGATGCAAAAAA CAGCACTGCG ACAA CGAAGTACTG GGAGAATTGGTCTGC TERM 2427 2514522 - 2514542 + g 75 -9.7 -3.54459 | CATGCCCGCTTAGCA CCGTGCC ATCGATA GGCACGG TTTCGCCAGCCTTAA Patl_2069 2516081 - 2515572 - | hypothetical protein TERM 2428 2516131 - 2516114 - R 100 -12.7 -5.38047 | opp_overlap 2516114 GATGTATATAAAAAA GCCTCGC ACAA GCGAGGC TTATTCTAACCGAAA TERM 2429 2516114 - 2516131 + r 90 -12.7 -3.78934 | opp_overlap 2516114 GATGTATATAAAAAA GCCTCGC ACAA GCGAGGC TTATTCTAACCGAAA Patl_2070 2517106 - 2516153 - | cytochrome c oxidase, cbb3-type, subunit III Patl_2071 2517272 - 2517099 - | Cbb3-type cytochrome oxidase component TERM 2430 2517179 - 2517159 - G 73 -11.1 -2.50982 | overlap 2517158 2517157 2517152 AGCAAAAATCAAATT GGCGGCTTC GTC GAAGCCGGC CTTAGAACGTTTGCT Patl_2072 2517879 - 2517274 - | cytochrome c oxidase, cbb3-type, subunit II Patl_2073 2519330 - 2517891 - | cytochrome c oxidase, cbb3-type, subunit I TERM 2431 2519078 - 2519062 - G 75 -10.9 -3.10344 | TTGTCACTGAATATA CGTACCT GAG AGGTACG TTGAACCACATAAAA TERM 2432 2519501 - 2519480 - H 79 -6.6 -4.59414 | GTATAATAATCAAAA TGAGCCCA AAAAGA TAGGCTCA AACACACTTGTAAGC Patl_2074 2519579 - 2520031 + | hypothetical protein TERM 2433 2520144 - 2520168 + T 91 -12.9 -3.14344 | opp_overlap 2520144 CAGACTCAAAAAAAA TGCCTAGACAG GGG CTGACTAGGCA TTGATGACAGAAATA TERM 2434 2520168 - 2520144 - T 100 -12.9 -5.83822 | opp_overlap 2520144 CAGACTCAAAAAAAA TGCCTAGACAG GGG CTGACTAGGCA TTGATGACAGAAATA Patl_2075 2520666 - 2520199 - | bacterioferritin Patl_2076 2521145 - 2520666 - | bacterioferritin Patl_2077 2521619 - 2521852 + | hypothetical protein Patl_2078 2521849 - 2522679 + | TM helix protein TERM 2435 2522826 - 2522806 - g 72 -6.1 -4.31085 | GATATCAAGGGAAAA TCGCCGC TTATATT GCAGCGA AGGTTCTGTACAACT Patl_2079 2522703 - 2523233 + | ECF subfamily RNA polymerase sigma-24 factor Patl_2080 2523825 - 2524925 + | OmpA/MotB TERM 2436 2525023 - 2525006 - f 88 -11.3 -3.61654 | opp_overlap 2525006 GATATTTATGCTAAA GGCACTC TAAT GAGTGCC TTTTTTATGACATAC TERM 2437 2525006 - 2525023 + F 100 -11.3 -5.26316 | opp_overlap 2525006 GATATTTATGCTAAA GGCACTC TAAT GAGTGCC TTTTTTATGACATAC TERM 2438 2525220 - 2525194 - f 73 -5.9 -4.56597 | opp_overlap 2525195, overlap 2525196 GCTTCTGGTGAAAAA TCGTTGGAGCA ATGTA TGCTCAAACAA ATGGAATTATCTGCC TERM 2439 2525472 - 2525455 - g 72 -5.7 -4.5464 | opp_overlap 2525455 2525453 GACACAGAAGCAAAA TTTCAAA TCTC TTTGAAA TATTTAGCGGTTGAA Patl_2081 2525209 - 2526099 + | phospholipase A1 Patl_2082 2528328 - 2526184 - | histidine kinase Patl_2083 2528965 - 2528450 - | hypothetical protein Patl_2084 2529319 - 2530638 + | glucose-1-phosphate adenylyltransferase TERM 2440 2531005 - 2531015 + G 74 -6.8 -4.24786 | TTTTGTGCTGGTGAT GCGT TTA ACGC TTTATATATTGTGCG TERM 2441 2531193 - 2531207 + G 72 -8.6 -3.737 | GTGCTATATCAGTCT GCATTC AGT GAATGC TTTGCTGGCGAATTC Patl_2085 2530846 - 2531640 + | Crp/FNR family transcriptional regulator Patl_2086 2531701 - 2532066 + | rhodanese-like protein Patl_2087 2533204 - 2532086 - | 6-phosphofructokinase Patl_2088 2534180 - 2533182 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 2442 2534255 - 2534269 + H 81 -2.8 -5.55664 | CGGACAAATTGATAG TGAGCA ATT TTCTCA TTTTTTTACTCGTCC Patl_2089 2534536 - 2535456 + | diguanylate cyclase TERM 2443 2535798 - 2535821 + G 81 -5.2 -5.10933 | CTATCACTCATATGG CGCTAGCG ATCTACGC CGCTTGCG TTTTATTTTAAGTGC Patl_2090 2535679 - 2536110 + | MerR family transcriptional regulator TERM 2444 2536144 - 2536125 - g 70 -2.1 -5.05577 | overlap 2536127 AAAGCAAAGTAAAAA CACAATC CTTTAT GATTGAG GGAGCAAGCTGCGCA TERM 2445 2536254 - 2536239 - g 70 -9 -3.33815 | ATTTTGCGCAACGAA CCGTCA CGAT TGACGG CGATGTAAACAGTCA Patl_2091 2536100 - 2538352 + | copper-translocating P-type ATPase Patl_2092 2538388 - 2538741 + | hypothetical protein TERM 2446 2539494 - 2539511 + G 72 -5.6 -4.53475 | TTTTATTCGGACTTG GCTTGA CATGGA TCAAGC TTCTTTTTCTCAAAT Patl_2093 2539333 - 2539578 + | hypothetical protein Patl_2094 2539618 - 2540040 + | hypothetical protein Patl_2095 2540627 - 2540220 - | response regulator receiver protein Patl_2096 2541403 - 2540765 - | two component LuxR family transcriptional regulator Patl_2097 2542589 - 2541393 - | PAS/PAC sensor signal transduction histidine kinase TERM 2447 2543223 - 2543190 - g 100 -9.6 -5.02074 | opp_overlap 2543188, overlap 2543192 GTACTGGGCAAAAAA GTTAGCGTCAGACT TGTTAC AGGCTGACGCTAGC CATACCTTAAGTGAC TERM 2448 2543221 - 2543192 - g 72 -10.8 -2.75975 | opp_overlap 2543188, overlap 2543190 ACTGGGCAAAAAAGT TAGCGTCAGACT TGTTAC AGGCTGACGCTA GCCATACCTTAAGTG Patl_2098 2542792 - 2543649 + | cation diffusion facilitator family transporter Patl_2099 2543988 - 2543683 - | hypothetical protein Patl_2100 2544955 - 2543993 - | heat shock protein DnaJ-like TERM 2449 2544401 - 2544414 + g 70 -2.4 -4.98531 | GCGCTGGCCATCTAC TACC CCTTGC GGTA TTTTTACTTTCAGGG TERM 2450 2545052 - 2545066 + r 73 -8.5 -3.71883 | opp_overlap 2545052 2545051 ATGTCTGATGAAAAG CGCGG CTCTA CCGCG TTTAACCTTGTATTG TERM 2451 2545066 - 2545052 - R 70 -9.2 -3.15027 | opp_overlap 2545052, overlap 2545051 ATGTCTGATGAAAAG CGCGGC TCT ACCGCG TTTAACCTTGTATTG Patl_2101 2545576 - 2545112 - | cytochrome c family protein TERM 2452 2545284 - 2545271 - G 71 -9.5 -3.21126 | opp_overlap 2545276 AACGACAGGCACTAA CGCGC GCGA GCGCG GCGCAAGCTCATGTG Patl_2102 2545959 - 2546543 + | GCN5-related N-acetyltransferase Patl_2103 2547686 - 2546805 - | hypothetical protein TERM 2453 2547950 - 2547938 - H 76 -3.3 -5.24129 | overlap 2547939 CGTCGGGATAAAAAA TGTGG TTT CCACT GAAATATGAAAGGGT TERM 2454 2549206 - 2549184 - g 76 -4.8 -4.88918 | overlap 2549200 GCAGTGCAAACAAAA GCAAACAGCT AGC AGATGCTCGC GCCGAGTCAGCTGCG Patl_2104 2548103 - 2551231 + | multi-sensor hybrid histidine kinase Patl_2105 2551628 - 2551326 - | ArsR family transcriptional regulator Patl_2106 2552107 - 2551634 - | protein of unknown function DUF395, YeeE/YedE Patl_2107 2552586 - 2552107 - | protein of unknown function DUF395, YeeE/YedE Patl_2108 2553550 - 2553825 + | hypothetical protein Patl_2109 2554649 - 2553834 - | redoxin TERM 2455 2555177 - 2555212 + r 83 -10.6 -3.76048 | opp_overlap 2555177 TCACTCAATATTAAA TGAGTTAAGAGCAG CATGTCCC CTGCCCTTAACTCA TTATATTGGTTGACG TERM 2456 2555212 - 2555177 - R 93 -12.8 -3.93782 | opp_overlap 2555177 TCACTCAATATTAAA TGAGTTAAGAGCAG CATGTCCC CTGCCCTTAACTCA TTATATTGGTTGACG Patl_2110 2556726 - 2555257 - | 6-phosphogluconate dehydrogenase TERM 2457 2555976 - 2555995 + g 72 -9.4 -3.49482 | overlap 2555974 GAGGTTCACCGTCTT CATCTTTG AAGG CAAAGATG TCTTTGGTGATGTCG TERM 2458 2556555 - 2556571 + g 76 -5.1 -4.81249 | overlap 2556557 CTAAGGATTGTACGC TGTCTGC ACC GCGGATA TTTTTACCTTTAGCG TERM 2459 2557186 - 2557151 - H 70 -9.2 -3.15579 | opp_overlap 2557161, overlap 2557161 CTAATTTTGTATCAA GCCCTATTAACTGTAT TAAT ATACAGTTAATATGCC GTAATTCGTAAACAT Patl_2111 2557218 - 2558453 + | phage integrase TERM 2460 2558496 - 2558513 + T 77 -7.7 -4.2349 | opp_overlap 2558496, overlap 2558466 TTTCTTAAAGAGTAA GCCCAAG AAAG TTTGGGC TTTTAAATATAGCGC Patl_2112 2560994 - 2558550 - | Pyrrolo-quinoline quinone TERM 2461 2558920 - 2558933 + g 74 -8.1 -3.91716 | TTAATAGCTCGTATC CCACC GTAG GGTGG TTGTTTGCACAGTAG Patl_2113 2563059 - 2561287 - | alpha amylase, catalytic region Patl_2114 2563473 - 2563985 + | hypothetical protein Patl_2115 2564931 - 2564158 - | TatD family hydrolase TERM 2462 2564347 - 2564357 + g 74 -5.4 -4.63486 | TTCAATCAGTAGGTT TTCC AGT GGAA TTTTCTTAACCACGT Patl_2116 2565896 - 2564994 - | DNA-directed DNA polymerase Patl_2117 2566527 - 2565898 - | thymidylate kinase Patl_2118 2567533 - 2566595 - | aminodeoxychorismate lyase Patl_2119 2568433 - 2567618 - | aminotransferase, class IV TERM 2463 2568535 - 2568509 - R 100 -12.4 -5.09225 | opp_overlap 2568509 2568505 ATCTGATGCAAAAAA GCCTGTAATAGC AAT GATATTACAGGC TTCGTTTAGATACTA TERM 2464 2568509 - 2568535 + r 90 -12.4 -3.55122 | opp_overlap 2568509, overlap 2568505 ATCTGATGCAAAAAA GCCTGTAATAGC AAT GATATTACAGGC TTCGTTTAGATACTA Patl_2120 2569804 - 2568566 - | beta-ketoacyl synthase TERM 2465 2569578 - 2569593 + g 73 -4 -4.88407 | GCTGCAATACCAAAC TGGATA AACT TGTCCA TTTTCTTGGTTTCTT TERM 2466 2569852 - 2569868 + r 91 -9.4 -4.59511 | opp_overlap 2569852 GTTAGATAAGAGAAA CGGCTC AGAAA GAGCCG TTTTTAAAAACTGTT TERM 2467 2569868 - 2569852 - R 89 -9.4 -4.31164 | opp_overlap 2569852 GTTAGATAAGAGAAA CGGCTC AGAAA GAGCCG TTTTTAAAAACTGTT Patl_2121 2570122 - 2569883 - | acyl carrier protein Patl_2122 2571043 - 2570306 - | 3-oxoacyl-(acyl-carrier-protein) reductase Patl_2123 2571987 - 2571058 - | malonyl CoA-acyl carrier protein transacylase TERM 2468 2571812 - 2571793 - G 72 -8.6 -3.69663 | gap 1, opp_overlap 2571793 ACTAGCAGCTAACAA CGCAGGCTG TGT CA-CCTGCG TTTGTCCTAATGTTT TERM 2469 2571793 - 2571812 + g 76 -8.6 -4.02456 | gap 1, opp_overlap 2571793 ACTAGCAGCTAACAA CGCAGGCTG TGT CA-CCTGCG TTTGTCCTAATGTTT Patl_2124 2573008 - 2572049 - | 3-oxoacyl-(acyl-carrier-protein) synthase III Patl_2125 2574037 - 2573012 - | fatty acid/phospholipid synthesis protein PlsX TERM 2470 2573125 - 2573112 - G 100 -8.1 -5.37043 | opp_overlap 2573111 2573112 ATCGCATACAAAAAA GCCTC ATCC GAGGC ATTTCCGTGGCTTTT TERM 2471 2574008 - 2573983 - G 95 -13.3 -3.92996 | opp_overlap 2573982 2573985 CTGCAGATAGAATAA TATGGGGGCCG TTAT CGCCCCCCATA ATATCTAACGCTAAG TERM 2472 2573985 - 2574006 + g 73 -11.5 -2.69468 | opp_overlap 2573983, overlap 2573982 GCAGATAGAATAATA TGGGGGCCG TTAT CGCCCCCCA TAATATCTAACGCTA Patl_2126 2574220 - 2574050 - | ribosomal protein L32 Patl_2127 2574758 - 2574231 - | hypothetical protein Patl_2128 2574882 - 2575466 + | maf protein Patl_2129 2576392 - 2575532 - | dTDP-4-dehydrorhamnose reductase Patl_2130 2576987 - 2576439 - | dTDP-4-dehydrorhamnose 3,5-epimerase Patl_2131 2577908 - 2577015 - | glucose-1-phosphate thymidylyltransferase Patl_2132 2579002 - 2577911 - | dTDP-glucose 4,6-dehydratase TERM 2473 2579036 - 2579046 + r 79 -5.4 -4.89063 | opp_overlap 2579026 2579036 2579034 TTAAATCTAAAAGTA GACA TCT TGTC TTTGTTTTTAACTAC Patl_2133 2580010 - 2579054 - | RluA family pseudouridine synthase TERM 2474 2580310 - 2580326 + H 78 -2.9 -5.40474 | opp_overlap 2580302 GAATTGACAACATAC TGGGTTT GTT ATGCCCA TTTTTTTCAACGCAT TERM 2475 2580452 - 2580433 - H 73 -9.4 -3.11339 | opp_overlap 2580429, overlap 2580427 2580447 2580448 AGTATTTAATACATA TATGCGTT AAAT AACGCATA AGGTACTTAGGCAGA TERM 2476 2582122 - 2582112 - g 76 -8.2 -4.13872 | ACCGAAGCAGATAAA GCCG TAA CGGC CACACCTGTTAAAGA Patl_2134 2580531 - 2583743 + | ribonuclease TERM 2477 2583814 - 2583780 - f 100 -16.6 -3.06315 | opp_overlap 2583785, overlap 2583785 TCAATAGTGTCAATA TAAAACCGCTGTCAGC ATA GCTAACAGCGGTTTTT TTATATTCTCGATTG TERM 2478 2583785 - 2583809 + F 100 -14.3 -5.84432 | opp_overlap 2583785 2583780 AGTGTCAATATAAAA CCGCTGTCAGC ATA GCTAACAGCGG TTTTTTTATATTCTC TERM 2479 2583809 - 2583785 - f 100 -16.5 -4.66938 | opp_overlap 2583785, overlap 2583780 AGTGTCAATATAAAA CCGCTGTCAGC ATA GCTAACAGCGG TTTTTTTATATTCTC Patl_2135 2583926 - 2585233 + | DEAD/DEAH box helicase-like Patl_2136 2585365 - 2587956 + | hypothetical protein Patl_2137 2587959 - 2588132 + | hypothetical protein Patl_2138 2588142 - 2588471 + | hypothetical protein TERM 2480 2588498 - 2588534 + T 100 -13.8 -4.32857 | opp_overlap 2588502, overlap 2588502 CATTGATTCAGCATA AAAAGCCGCCAGTGTA TTCGT TACACTGGCGGCTTCA TTTCTATTTACGGGC TERM 2481 2588530 - 2588502 - T 100 -19 -4.9218 | opp_overlap 2588498 2588502 GATTCAGCATAAAAA GCCGCCAGTGTA TTCGT TACACTGGCGGC TTCATTTCTATTTAC TERM 2482 2588502 - 2588530 + T 100 -19 -3.72621 | opp_overlap 2588502, overlap 2588498 GATTCAGCATAAAAA GCCGCCAGTGTA TTCGT TACACTGGCGGC TTCATTTCTATTTAC Patl_2139 2589332 - 2588568 - | short chain dehydrogenase Patl_2140 2590124 - 2589360 - | short-chain dehydrogenase/reductase SDR Patl_2141 2592132 - 2590282 - | acyl-CoA dehydrogenase-like TERM 2483 2590424 - 2590435 + g 73 -2.2 -5.11063 | overlap 2590433 AATGCTTCATCATCC TGTG ATAC CGCA TTTTTATTAAGTGCT Patl_2142 2592313 - 2593287 + | AraC family transcriptional regulator TERM 2484 2593561 - 2593550 - f 70 -3 -5.11254 | opp_overlap 2593550 AATAAGAAAAACAAA TGAT ATGC ATCA ATTTAGGGCAAGTTA Patl_2143 2593868 - 2594176 + | glycoside hydrolase family protein Patl_2144 2596191 - 2594233 - | Beta-galactosidase TERM 2485 2595296 - 2595313 + g 74 -5.5 -4.70117 | AGATCAGGGTGACCG GTCCGAG CAAA CTCCGAC TTTGTTTGTTCAGTT TERM 2486 2595543 - 2595526 - G 79 -7.7 -4.38171 | opp_overlap 2595526 CATATCAGAGCAAAA GCGTTGA TAAT CCAACGC TTGTGACGGATTTGG TERM 2487 2596517 - 2596497 - R 100 -11.2 -5.74122 | CAGCAGATAAAAAAA TGCCGCTT ATATA AAGCGGCA TTCGAATGACAAAAG Patl_2145 2597466 - 2596540 - | electron transfer flavoprotein, alpha subunit Patl_2146 2598281 - 2597466 - | electron transfer flavoprotein beta-subunit TERM 2488 2598267 - 2598252 - G 81 -4.8 -5.1963 | opp_overlap 2598252, overlap 2598246 TTTAAGCAACAAAAA TGTAAT TAAC ATTACA TTTACGGAATACATT Patl_2147 2598644 - 2600293 + | electron-transferring-flavoprotein dehydrogenase TERM 2489 2600332 - 2600315 - f 76 -7 -4.32201 | opp_overlap 2600315 TTAATGAATCTAAAA GGCGAA TTTTAT TTCGCC TTTTTTTCTTTTCAA TERM 2490 2600315 - 2600332 + F 100 -7 -6.09196 | opp_overlap 2600315 TTAATGAATCTAAAA GGCGAA TTTTAT TTCGCC TTTTTTTCTTTTCAA Patl_2148 2600475 - 2600876 + | histone-like nucleoid-structuring protein H-NS TERM 2491 2601430 - 2601440 + G 72 -3.2 -5.06414 | TTGTCAATGAGGCTT CTGT TAG GCAG TTTTTATTAAAAAGC Patl_2149 2601063 - 2601746 + | alpha/beta hydrolase fold Patl_2150 2601808 - 2602020 + | hypothetical protein Patl_2151 2602075 - 2602599 + | flavodoxin FldA TERM 2492 2602629 - 2602642 + F 93 -8.1 -5.37345 | opp_overlap 2602614 2602612 2602629 CCCTTCGTTATGAAA GGAGC GTGA GCTCC TTTTTTATGATTAAA TERM 2493 2602642 - 2602629 - f 70 -8.1 -3.72576 | opp_overlap 2602629, overlap 2602614 2602612 CCCTTCGTTATGAAA GGAGC GTGA GCTCC TTTTTTATGATTAAA fur 2602822 - 2603244 + | ferric uptake regulator TERM 2494 2603305 - 2603345 + T 79 -5.8 -4.87665 | opp_overlap 2603303 2603305 ATGCGTACAACAATA GCCAAGATAG-ATATCAC CCAAAAT GT-ATATTCTATCTTGGC TTTTTATCCCTCAGC Patl_2153 2604241 - 2603549 - | molybdate ABC transporter, inner membrane subunit TERM 2495 2604058 - 2604045 - G 73 -2.4 -5.21506 | ACAAGAAGATAAAAA CCTA GCACAG TAGG TGGCAAAATTAACGG Patl_2154 2605025 - 2604231 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Patl_2155 2605482 - 2605018 - | molybdopterin biosynthesis MoaE Patl_2156 2605731 - 2605486 - | thiamineS Patl_2157 2606228 - 2605728 - | molybdenum cofactor biosynthesis protein C Patl_2158 2606777 - 2606232 - | molybdenum cofactor biosynthesis protein B Patl_2159 2607584 - 2606892 - | putative molybdopterin biosynthesis gene moaA 2608569 - 2607601 - | molybdenum cofactor biosynthesis protein A TERM 2496 2609235 - 2609208 - g 72 -10.6 -2.78032 | gap 1, opp_overlap 2609223 2609224, overlap 2609205 2609207 GCTTGCTGAAAACAT CGC-CAAGCACCA ATC TGGTGCATGCGCG CCCTATTTTTTAGGC TERM 2497 2609335 - 2609355 + G 75 -6.1 -4.55287 | CATGGTTTAAAAGTG GTTGTCATG TCA CTTGACGAC TTTTATCTGGATCAA Patl_2161 2609119 - 2610009 + | hypothetical protein Patl_2162 2610002 - 2610826 + | mannosyl-3-phosphoglycerate phosphatase Patl_2163 2610888 - 2612117 + | glycosyltransferase involved in cell wall biogenesis Patl_2164 2612143 - 2613903 + | alpha amylase, catalytic region TERM 2498 2613928 - 2613978 + F 74 -5.1 -4.66163 | gap 1 TCCTTCTTACCTTTG GCGACAAAATAAATGAGACAAT GCACACAA AATGTTTC-TTTATTTTGTTGC TTTTTCGCTACGCGT Patl_2165 2614339 - 2614545 + | hypothetical protein Patl_2166 2614657 - 2614875 + | calcium-binding EF-hand TERM 2499 2614933 - 2614906 - T 75 -10 -3.19859 | opp_overlap 2614906 2614903 2614909, overlap 2614904 2614903 TAATCGATAAAATGA GGTTAGAGAC TCTCTATT GTCTCTAACC TTCCATTTCATAGTC TERM 2500 2614906 - 2614933 + T 77 -10 -3.31415 | opp_overlap 2614904 2614903 2614906, overlap 2614903 2614909 TAATCGATAAAATGA GGTTAGAGAC TCTCTATT GTCTCTAACC TTCCATTTCATAGTC Patl_2167 2616058 - 2615075 - | zinc-binding alcohol dehydrogenase TERM 2501 2617282 - 2617252 - g 73 -7.6 -4.1021 | overlap 2617248 2617255 2617259 GCCGAGAAGTACAAA TAATCCAGCGCTTA TCA CAAGCGCCTGATCA TCCGGTCTCAACAAA TERM 2502 2617279 - 2617255 - g 71 -7.1 -4.16837 | overlap 2617252 2617248 2617259 GAGAAGTACAAATAA TCCAGCGCTTA TCA CAAGCGCCTGA TCATCCGGTCTCAAC Patl_2168 2616159 - 2617346 + | PUA domain-containing protein TERM 2503 2617380 - 2617407 + T 93 -10 -4.72007 | gap 1, opp_overlap 2617380 2617383 TATAGAAATACTTAA CAAGCGCT-ACTT CTA AGGTTAGCGCTTG TTTATTTTCCTACGC Patl_2169 2617781 - 2617479 - | type IV pilus assembly PilZ Patl_2170 2621745 - 2617897 - | ATP-dependent helicase HrpA TERM 2504 2618413 - 2618435 + g 76 -8.4 -4.053 | overlap 2618417 TTCTGGCGTGCGAAT GTCACCGTGA AGG TCACGGTAGC TTTCTATCAGCTCGT TERM 2505 2619071 - 2619081 + g 74 -6.8 -4.33708 | GCGGGTACAAAGTTT CGTC GAA GACG TTTTGGTAATGATTT TERM 2506 2619880 - 2619897 + g 72 -5.5 -4.46072 | opp_overlap 2619865, overlap 2619865 2619882 CTTGCCGTTACGTGC GCCAAGG TATT CCTTGTC TTTATCTTTATTGCC TERM 2507 2621664 - 2621674 + g 86 -3.2 -5.74684 | CTTTACTCAACTTAG CGAG GGC TTCG TTTTTCTTTTTGTTA Patl_2171 2622338 - 2621919 - | CBS domain-containing protein TERM 2508 2623515 - 2623498 - g 76 -8.5 -4.07568 | overlap 2623509 TTGCTCCGGCTAAAA CGTTAGA TGAA TCTAACG CGGCTAGACTCGGTA Patl_2172 2622570 - 2624000 + | exodeoxyribonuclease I TERM 2509 2624203 - 2624186 - g 79 -7.7 -4.49556 | overlap 2624188 GGTTGATGAAACAAA TACGCAC CTTA GTGCGCA CATTAACCCACAAGA TERM 2510 2624201 - 2624188 - g 74 -8.1 -3.85603 | overlap 2624186 TTGATGAAACAAATA CGCAC CTTA GTGCG CACATTAACCCACAA Patl_2173 2624151 - 2625809 + | hypothetical protein TERM 2511 2625845 - 2625883 + T 86 -9 -4.42386 | opp_overlap 2625849 2625856, overlap 2625849 2625856 TTCCACCTAGTGCGA TTAACAAAAAACGGCG CTATACA CGCCGTTTTTCGATAA TTTTATGACTAAAAC TERM 2512 2625849 - 2625879 + T 70 -9.8 -2.50791 | opp_overlap 2625849 2625856, overlap 2625845 2625856 ACCTAGTGCGATTAA CAAAAAACGGCG CTATACA CGCCGTTTTTCG ATAATTTTATGACTA TERM 2513 2625879 - 2625849 - T 85 -12.7 -3.15663 | opp_overlap 2625845 2625849 2625856, overlap 2625856 ACCTAGTGCGATTAA CAAAAAACGGCGC TATAC ACGCCGTTTTTCG ATAATTTTATGACTA TERM 2514 2625872 - 2625856 - T 93 -7.2 -5.5112 | opp_overlap 2625849 2625845 2625856, overlap 2625849 GCGATTAACAAAAAA CGGCGC TATAC ACGCCG TTTTTCGATAATTTT TERM 2515 2625856 - 2625872 + T 80 -6.5 -4.7329 | opp_overlap 2625856 2625849, overlap 2625849 2625845 GCGATTAACAAAAAA CGGCG CTATACA CGCCG TTTTTCGATAATTTT Patl_2174 2626141 - 2625905 - | hypothetical protein TERM 2516 2626059 - 2626040 - G 71 -7.2 -4.10161 | gap 1 GACTACGCCTGAAAA GATG-GCAG AAG CTGCACATC CGGGTGCCCCATCGC Patl_2175 2627167 - 2626295 - | 3-hydroxyisobutyrate dehydrogenase TERM 2517 2626394 - 2626409 + g 79 -4.6 -5.26316 | opp_overlap 2626384, overlap 2626387 2626385 AACTAGCGCTGTCAG CGGCAG TGTG CTTCCG TTTTTTCTAGACTCA Patl_2176 2627298 - 2627729 + | glutathione peroxidase Patl_2177 2628502 - 2627744 - | methyltransferase type 11 Patl_2178 2629301 - 2628540 - | hypothetical protein TERM 2518 2629040 - 2629053 + g 73 -2.3 -5.1356 | opp_overlap 2629041 2629042, overlap 2629041 TATCGTTCTTAATTA ACGCA GCTA TGCGC TTTTTCTTCATCCCA TERM 2519 2629371 - 2629341 - R 80 -11.3 -2.82516 | opp_overlap 2629352 CGTTCGACTATGACA GCACTCAATGACT TAGTG AATCACTGAGTGC TGTACGAATGTGGCG Patl_2179 2630907 - 2629462 - | deoxyribodipyrimidine photolyase TERM 2520 2631110 - 2631083 - R 100 -14.3 -6.17292 | opp_overlap 2631083 AAATGCAAAAAAAAA GCCTTGTTACG GATTAT CGTAACAAGGC TTTTTATAAGCTACT TERM 2521 2631083 - 2631110 + r 100 -15 -4.86001 | opp_overlap 2631083 AAATGCAAAAAAAAA GCCTTGTTACGG ATTA TCGTAACAAGGC TTTTTATAAGCTACT Patl_2180 2633741 - 2631132 - | TonB-dependent receptor TERM 2522 2631459 - 2631420 - G 95 -13 -4.21319 | opp_overlap 2631418 ATTAACGCGAATAAA GGCACTCACTGTATCCCA GCTT TGCGATACAGTGAATGTC GCTCTATGGTGAGGA TERM 2523 2634073 - 2634055 - R 100 -6.7 -5.95539 | opp_overlap 2634055 TCTTAAACAAAAAAA TACCGGC ATTAA ACCGGTA TTTTTAAGCAAAAAT TERM 2524 2634055 - 2634073 + r 77 -6 -4.56775 | opp_overlap 2634055 TCTTAAACAAAAAAA TACCGG CATTAAA CCGGTA TTTTTAAGCAAAAAT Patl_2181 2635142 - 2634108 - | putative periplasmic protease TERM 2525 2634898 - 2634911 + g 84 -5.2 -5.38321 | TTTGTCTCTTTTTTA GCGG CTTTGT CCGC TTTTTTCTGCTCTTT TERM 2526 2635197 - 2635223 + r 87 -12.4 -3.40597 | opp_overlap 2635202, overlap 2635202 GACTAAATCGCAAAA AAAAAGCTAGGC GAG GCCTAGCTTTTG TCTTTCAGTGAAAAA TERM 2527 2635202 - 2635218 + r 100 -12.3 -4.80455 | opp_overlap 2635202, overlap 2635197 AATCGCAAAAAAAAA GCTAGGC GAG GCCTAGC TTTTGTCTTTCAGTG TERM 2528 2635218 - 2635202 - R 100 -12.3 -6.10489 | opp_overlap 2635197 2635202 AATCGCAAAAAAAAA GCTAGGC GAG GCCTAGC TTTTGTCTTTCAGTG Patl_2182 2637857 - 2635239 - | hypothetical protein TERM 2529 2637035 - 2637047 + g 74 -3.3 -5.0133 | opp_overlap 2637035 ACGCAGTGGCATAAC CGGCA ATT TGCAG TTTTTTAACAGAATC TERM 2530 2637104 - 2637094 - G 73 -4 -4.8667 | GAGACCGTAGAAAAA TATG CTG CATA AGAAATCGCTTCACG TERM 2531 2637687 - 2637672 - G 82 -7.6 -4.70879 | TGTAAAGTCGAAAAA GTTACC ACTT GGTAAC ATTAACAAATCGTTG Patl_2183 2638116 - 2638859 + | short-chain dehydrogenase/reductase SDR TERM 2532 2638930 - 2638903 - T 100 -17.2 -4.62622 | opp_overlap 2638903 GCAATCATAAAGAAA GCCCCTGTTAAT CATC ATTAACAGGGGC TTTTCTATTTCGCTC TERM 2533 2638903 - 2638930 + T 100 -17.2 -4.80455 | opp_overlap 2638903 GCAATCATAAAGAAA GCCCCTGTTAAT CATC ATTAACAGGGGC TTTTCTATTTCGCTC Patl_2184 2640647 - 2638971 - | glutaminyl-tRNA synthetase TERM 2534 2640964 - 2640945 - g 72 -5 -4.62054 | GTAATGAAAGCAAAA GCAACATC GTTT GATATCGC TCATCAAGCTGGTGT Patl_2185 2640933 - 2641952 + | LacI family transcription regulator Patl_2186 2643727 - 2641997 - | alpha amylase, catalytic region TERM 2535 2642207 - 2642193 - G 72 -5.7 -4.53036 | opp_overlap 2642193 2642192 TTAGAAATAGTAAAA CGATG TGTCT CATCG CTCTTGTTCAACAAT TERM 2536 2642802 - 2642784 - G 91 -2.4 -5.88197 | GCAAACATAAAAAAA TCAGGG TGCAATG CCCTAA CCCGAGCAGCCATTT Patl_2187 2645258 - 2643750 - | major facilitator transporter Patl_2188 2646707 - 2645619 - | diguanylate cyclase TERM 2537 2646591 - 2646575 - G 72 -8.7 -3.66803 | TTTCAAGAGGGGAAA GGCATTG ATT CAACGCC TTAAGATTAATATTG Patl_2189 2647366 - 2646920 - | 4-hydroxybenzoyl-CoA thioesterase Patl_2190 2648339 - 2647569 - | rhomboid-like protein Patl_2191 2648548 - 2648913 + | hypothetical protein Patl_2192 2648910 - 2650040 + | succinyl-diaminopimelate desuccinylase Patl_2193 2650037 - 2650738 + | peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins Patl_2194 2651291 - 2650965 - | hypothetical protein Patl_2195 2652460 - 2651408 - | succinylglutamate desuccinylase Patl_2196 2653887 - 2652565 - | diguanylate cyclase/phosphodiesterase TERM 2538 2653551 - 2653562 + g 74 -7.2 -4.1964 | ATGAATGATCACCTA CCCC AATT GGGG TTTTAAAATGTTCAA TERM 2539 2653915 - 2653927 + r 73 -7.7 -3.8125 | overlap 2653914 ACCCCAAATACTTCT GACAC TGT GTGTC TATTTTGATTAGGAA TERM 2540 2653973 - 2653946 - R 100 -18.6 -4.77036 | opp_overlap 2653949 TTTGATTAGGAAAAA CAAGGCGCTAAC CATA GTTAGCGCCTTG CATATAGGGTAATAG TERM 2541 2653949 - 2653970 + r 95 -14.5 -3.12999 | opp_overlap 2653946 GATTAGGAAAAACAA GGCGCTAAC CATA GTTAGCGCC TTGCATATAGGGTAA Patl_2197 2656544 - 2654049 - | glycogen/starch/alpha-glucan phosphorylases TERM 2542 2656713 - 2656688 - R 100 -16.3 -5.92399 | opp_overlap 2656688 TAACAAAACAAAAAA GGCGGTTGAAT ACGT ATTCAACCGCC TTAACTTAGAATTTA TERM 2543 2656688 - 2656713 + r 100 -16.3 -3.1996 | opp_overlap 2656688 TAACAAAACAAAAAA GGCGGTTGAAT ACGT ATTCAACCGCC TTAACTTAGAATTTA Patl_2198 2658446 - 2656797 - | phosphoglucomutase TERM 2544 2656961 - 2656974 + g 75 -9.5 -3.62597 | TCGCCACTTTCACCC CGCCG ATCG CGGCG TTATTCCCCGATGCA TERM 2545 2657571 - 2657557 - G 72 -5 -4.564 | overlap 2657558 AACGCTAAATCAAAA CGATCT TTA AGATCA ATTAAGCCAGCCATT Patl_2199 2658984 - 2658460 - | negative regulator of replication initiation Patl_2200 2660218 - 2659148 - | putative RNA 2'-O-ribose methyltransferase TERM 2546 2659404 - 2659415 + g 82 -3 -5.4833 | opp_overlap 2659404 ATGTCACACACCAAC CAAT ACAC ATTG TTTTTTCTTGGCTGA Patl_2201 2660593 - 2660222 - | hypothetical protein Patl_2202 2661318 - 2660695 - | hypothetical protein Patl_2203 2662213 - 2661302 - | DNA-binding transcriptional activator GcvA Patl_2204 2662433 - 2662717 + | hypothetical protein Patl_2205 2663710 - 2662859 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2547 2664578 - 2664589 + G 80 -7.2 -4.70921 | opp_overlap 2664573 GAACCCAAAGCGGAA GGCC CGAC GGCC TTTGTTTCTATTATG TERM 2548 2665554 - 2665536 - g 79 -4.4 -5.20222 | opp_overlap 2665536, overlap 2665537 AGCAAACAAATAAAA CCGATGCC TTA GGCGTCGC TCAGTTTGTGCCAGC Patl_2206 2664143 - 2665576 + | tRNA-i(6)A37 thiotransferase enzyme MiaB Patl_2207 2665605 - 2666642 + | PhoH-like protein TERM 2549 2666714 - 2666687 - g 73 -11.3 -2.52676 | opp_overlap 2666679 2666688 GATGCTGCCAATTTA CCCAGCGCTGA TGACTT TCAGCGCTGGT TGAATGCGGTTCTTG TERM 2550 2666688 - 2666713 + G 88 -14.8 -3.08738 | opp_overlap 2666687, overlap 2666679 ATGCTGCCAATTTAC CCAGCGCTGA TGACTT TCAGCGCTGG TTGAATGCGGTTCTT Patl_2208 2666639 - 2667097 + | hypothetical protein Patl_2209 2667131 - 2667991 + | CBS domain-containing protein TERM 2551 2668033 - 2668061 + G 95 -12.6 -4.06384 | gap 1 TTATCATTATTACTT GGAGCG-AGCTTA ACCC TAAGCTACGCTCC TTTCTCGTATTGGGC Patl_2210 2668006 - 2669499 + | apolipoprotein N-acyltransferase TERM 2552 2669538 - 2669556 + T 86 -11 -3.93556 | overlap 2669532 2669529 TTGTTTCGACACGCA GCGCGTTG TAT TAACGCGC TTTCGTTGGGTCACT Patl_2211 2670497 - 2669616 - | hypothetical protein TERM 2553 2670686 - 2670664 - H 75 -5.6 -4.72272 | overlap 2670665 2670666 TCTTTGGAGTAAAAA CCCTCGACAT TTG ATATCGAGAA CGTCAGCTTTGTTAA Patl_2212 2671058 - 2671618 + | ThiJ/PfpI TERM 2554 2671694 - 2671710 + T 90 -9.4 -4.43642 | opp_overlap 2671694 CATTAAACAAAAAAA GCGTGC AGTAA GCACGC TTTGTTCATTATTTT TERM 2555 2671710 - 2671694 - T 100 -9.4 -5.99154 | opp_overlap 2671694 CATTAAACAAAAAAA GCGTGC AGTAA GCACGC TTTGTTCATTATTTT Patl_2213 2672254 - 2671778 - | transcription elongation factor GreA TERM 2556 2672102 - 2672120 + g 75 -3 -5.11836 | opp_overlap 2672088, overlap 2672091 2672088 GCTTTGCTGCTCACG CGCAGCAT GGT ATTCAGCG TTTTCTTTTAAATCT TERM 2557 2672341 - 2672305 - R 76 -6.6 -4.34488 | opp_overlap 2672340, overlap 2672308 TACATGGATAATAAA TAAGTGCTGAGCGT AATAAATCA ACGCCCAGCACCGA ATTAATAAACGATTA TERM 2558 2672338 - 2672308 - R 89 -10.5 -4.28115 | overlap 2672305 ATGGATAATAAATAA GTGCTGAGCGT AATAAATCA ACGCCCAGCAC CGAATTAATAAACGA carB 2675572 - 2672354 - | carbamoyl phosphate synthase large subunit TERM 2559 2672524 - 2672555 + g 71 -3.8 -4.74132 | gap 1 TTGCTTGACGTCCTT CGGTG-GTATTGATG ATA TAACAATATTCACCG TTTTTAATCGCATCT Patl_2215 2676756 - 2675611 - | carbamoyl-phosphate synthase, small subunit TERM 2560 2676167 - 2676155 - G 72 -6.3 -4.25104 | TGTTTGGCACCAAAA TCGTA GGC TACGA CGTGAAACGGCAAAT TERM 2561 2676177 - 2676190 + g 70 -5.3 -4.41047 | CTACGACGTGAAACG GCAAA TCAG TTTGC TTTTCGTTGAAGCCT TERM 2562 2676850 - 2676822 - R 91 -8.2 -5.35222 | opp_overlap 2676822 2676821 AAAACCTATAAAAAA CGGGCTGTAACT AGTTG AATTACATCCCG CTTTACCGTATTTGC Patl_2216 2677850 - 2677047 - | dihydrodipicolinate reductase TERM 2563 2677755 - 2677773 + g 76 -7.4 -4.21098 | opp_overlap 2677755 GCTTGCTCTGACAAA TGCCGCGT TTA ATGTGGCA TTTTGCGATTGATCT TERM 2564 2677888 - 2677905 + r 77 -9.9 -3.55444 | opp_overlap 2677903, overlap 2677877 CTGTGGCGACATTGT GCCTGAT TTAC ATCAGGC TTTCAGCCATACAAG Patl_2217 2678413 - 2677940 - | AsnC family transcriptional regulator TERM 2565 2677988 - 2678008 + g 70 -4.7 -4.37886 | overlap 2678006 TTCCATTACGACGTA GGTGTGA GTTTGCG TCACGCC TTTTATAGAGGCTAA TERM 2566 2678435 - 2678445 + r 81 -5.4 -5.17786 | opp_overlap 2678435 2678433 TGCCTTGTAGTAACA CGAT TTT ATCG TTTTTAGTTTTGTTC Patl_2218 2682396 - 2678590 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 2567 2678631 - 2678651 + g 79 -3.2 -5.36441 | overlap 2678635 CATTACCACCTGTGG CTACGACG TTATC CGTCTTGG TTTTTTCTGTGGCAA TERM 2568 2683232 - 2683264 + G 83 -13.5 -3.21704 | opp_overlap 2683230, overlap 2683229 GTATCTGATGAGACG CAGGGTATCATGCAG TGG CTGCATCACACCCTG TTCGATGTATTATTG Patl_2219 2682815 - 2683504 + | cytochrome B561 TERM 2569 2683533 - 2683580 + T 80 -6.4 -4.73388 | gap 1, opp_overlap 2683541, overlap 2683535 2683545 ACGAAATCAATTAAG TAGATAAACGAATACAGCAT-CC ATG GGTATGCTGTATTCGCTAACCTC TTTTTCCTAAACCTT TERM 2570 2683535 - 2683578 + T 83 -9 -3.98256 | gap 1, opp_overlap 2683541, overlap 2683533 2683545 GAAATCAATTAAGTA GATAAACGAATACAGCAT-CC ATG GGTATGCTGTATTCGCTAACC TCTTTTTCCTAAACC TERM 2571 2683572 - 2683541 - T 100 -15.4 -4.15143 | gap 1, opp_overlap 2683535 2683533 2683545 AATTAAGTAGATAAA CGAATACAGCAT-CC ATG GGTATGCTGTATTCG CTAACCTCTTTTTCC Patl_2220 2684390 - 2683689 - | hypothetical protein Patl_2221 2685385 - 2684534 - | 3-mercaptopyruvate sulfurtransferase TERM 2572 2686072 - 2686051 - g 72 -6.5 -4.2558 | TATGCGCTACCAAAA GGAGGTGAC CTTC ATCACCACC TTGGCGGTTCGGGCT TERM 2573 2686621 - 2686632 + G 80 -7.2 -4.56597 | opp_overlap 2686620, overlap 2686614 2686613 GCCCGATTGCAATAT GCGC TATT GCGC TTTTTACCCAACGCC Patl_2222 2685730 - 2687343 + | adenosine deaminase Patl_2223 2687391 - 2688851 + | uracil-xanthine permease TERM 2574 2689200 - 2689178 - g 72 -9.2 -3.57263 | overlap 2689179 AGCTGCACCGGTAAA GTGATCATGC CAG GCATGATCAA CACTCATCACCATTT TERM 2575 2689199 - 2689179 - g 78 -12.7 -2.74144 | overlap 2689178 GCTGCACCGGTAAAG TGATCATGC CAG GCATGATCA ACACTCATCACCATT TERM 2576 2689629 - 2689645 + G 76 -5.1 -4.84918 | opp_overlap 2689603, overlap 2689600 2689592 TGTTGCAAATTGCGC TGGCG CCCTGTT CGCCA TTTTCTGTTTCTCAA Patl_2224 2689001 - 2690380 + | hydroxydechloroatrazine ethylaminohydrolase TERM 2577 2690558 - 2690546 - f 83 -3.5 -5.55001 | TAAGAAAAAATAAAA TATAT CAT ATATA TCAACAACTTACCTA TERM 2578 2691312 - 2691340 + G 79 -7.4 -4.40003 | GCAGAAATCGGCGGC CCTGCTACATTG GGCGG CAAAGAAGCAGG TTTCTATTTGTACGG TERM 2579 2691716 - 2691701 - g 72 -4.7 -4.56093 | AATGCAATTAGAAAA TGTGG GTACGA CCACA TTGGGCCGCAATCAA TERM 2580 2692270 - 2692254 - g 72 -5.1 -4.57569 | overlap 2692255 2692256 TTATTGCTCGAAAAA GGTGACA TTC TGTCAAC CAGTGAAACGGTTGA Patl_2225 2690697 - 2693135 + | TonB-dependent receptor TERM 2581 2693173 - 2693196 + F 100 -11.8 -5.71712 | opp_overlap 2693173 2693175 ATTTATTCCAACAGA CAGGTATGCT ATTT AGCATGCCTG TTTTTTTATATACGG TERM 2582 2693196 - 2693173 - f 72 -9.6 -3.08992 | opp_overlap 2693173, overlap 2693175 ATTTATTCCAACAGA CAGGTATGCT ATTT AGCATGCCTG TTTTTTTATATACGG Patl_2226 2693219 - 2694946 + | purine nucleoside permease TERM 2583 2694982 - 2695001 + F 86 -10 -4.01137 | TCATGCAAACGATTT GGCCTAGT TTTC ACTGGGCC TTATTATATTCATTT TERM 2584 2695286 - 2695316 + G 100 -13.4 -4.56597 | overlap 2695288 ACCAAGAGGTGTTGC TATGCTCATCGCTG GTG TAGCGATGAGCACA TTTTTCACGGCCAGC TERM 2585 2695288 - 2695314 + G 90 -16 -2.60032 | overlap 2695286 CAAGAGGTGTTGCTA TGCTCATCGCTG GTG TAGCGATGAGCA CATTTTTCACGGCCA Patl_2227 2695242 - 2695547 + | hypothetical protein TERM 2586 2695587 - 2695607 + T 100 -16.9 -4.62872 | opp_overlap 2695587 GTAAACATAAAAAAA GGGCCTGCT TTT AGCAGGCCC TTTTTGCGCATTAAT TERM 2587 2695607 - 2695587 - T 100 -16.9 -5.88197 | opp_overlap 2695587 GTAAACATAAAAAAA GGGCCTGCT TTT AGCAGGCCC TTTTTGCGCATTAAT Patl_2228 2696222 - 2695641 - | OmpA-like transmembrane region TERM 2588 2697282 - 2697269 - g 79 -8.1 -4.23999 | opp_overlap 2697266, overlap 2697266 TTAGACTTAAAAGAA GCCAC TATC GTGGC GCCTATTTCTGGTTA Patl_2229 2696765 - 2697982 + | RND family efflux transporter MFP subunit TERM 2589 2700766 - 2700750 - g 72 -8.7 -3.78329 | TTGGACCAAGTGAAA TTACCCG CAT CGGGCAA GAACGCGTCGCGGTG Patl_2230 2697998 - 2701468 + | acriflavin resistance protein TERM 2590 2701842 - 2701820 - g 79 -8.4 -4.25104 | TGCCTGGGACGAAAA CCTCAAAGCC AAG GGCATTGAAG CCAGAGAAAAGATAG Patl_2231 2701461 - 2704583 + | acriflavin resistance protein TERM 2591 2704596 - 2704634 + F 83 -9.1 -4.07647 | opp_overlap 2704596 2704619 TAGCGTGGCGATGAA GCCTTTGAATTGTCA TACATAAAT TGAGAATTCAAAGGC TTTGGTTTAGGCTAT TERM 2592 2704634 - 2704596 - f 70 -9.1 -3.14344 | opp_overlap 2704596, overlap 2704619 TAGCGTGGCGATGAA GCCTTTGAATTGTCA TACATAAAT TGAGAATTCAAAGGC TTTGGTTTAGGCTAT Patl_2232 2704675 - 2705691 + | aldo/keto reductase TERM 2593 2705840 - 2705824 - g 72 -6.5 -4.20696 | TCATTAATCCTAAAA GCCCACA AAA CATGGGC AGTATTCTGCGTGCA TERM 2594 2706023 - 2706035 + G 73 -10.5 -3.11732 | opp_overlap 2706023 TGTCGAATTAGTAGA GGGCG CTA CGCCC TTACCTCACTTTAGG TERM 2595 2706035 - 2706023 - g 72 -10.5 -2.86164 | opp_overlap 2706023 TGTCGAATTAGTAGA GGGCG CTA CGCCC TTACCTCACTTTAGG Patl_2233 2705709 - 2706305 + | tRNA/rRNA methyltransferase (SpoU) Patl_2234 2706560 - 2707783 + | RND family efflux transporter MFP subunit TERM 2596 2708620 - 2708639 + G 73 -7.9 -4.18161 | overlap 2708623 TGACTTAGCCTACTT CAATGGC GAGCAA GCCATTG TTTTCGCCATTTCTA TERM 2597 2708878 - 2708893 + G 77 -9 -4.00782 | CACTGGTCTAATCGT TGGCAC GATA GTGCCA TTTGTCATGCTCTCG TERM 2598 2709853 - 2709836 - g 71 -3.3 -4.7497 | opp_overlap 2709842 2709844, overlap 2709844 GTCATTTATCAAAAA GCCCAAG AGGT CATGGAC CTGCTCTATGATGTG Patl_2235 2707796 - 2710864 + | acriflavin resistance protein TERM 2599 2710952 - 2710916 - T 100 -13.8 -4.68103 | opp_overlap 2710917, overlap 2710917 TTAATGTGAACAAAA GGACCGGCTCACGT ACCAGAATA ACGTGAGCCGGTCT TTTTATATCTAGCAA TERM 2600 2710917 - 2710951 + T 100 -17.3 -5.03994 | opp_overlap 2710916 2710917 TAATGTGAACAAAAG GACCGGCTCACGT ACCAGAATA ACGTGAGCCGGTC TTTTTATATCTAGCA TERM 2601 2710951 - 2710917 - T 100 -17.3 -3.40139 | opp_overlap 2710917, overlap 2710916 TAATGTGAACAAAAG GACCGGCTCACGT ACCAGAATA ACGTGAGCCGGTC TTTTTATATCTAGCA Patl_2236 2713148 - 2710968 - | formate dehydrogenase TERM 2602 2712803 - 2712819 + g 72 -8.7 -3.76952 | GACCAAATAAGATGC TGCCCAT ATT GTGGGCA TTTGGGTTACCTAGG Patl_2237 2713584 - 2713261 - | hypothetical protein TERM 2603 2714325 - 2714309 - g 73 -2.2 -5.11613 | AGACGATTTAAAAAA TGCGCA GTTGG TGCTCA AGCATGCATTGCAAG Patl_2238 2713761 - 2715026 + | RND family efflux transporter MFP subunit Patl_2239 2715099 - 2715800 + | ABC transporter related Patl_2240 2715793 - 2717100 + | hypothetical protein TERM 2604 2718021 - 2718033 + G 70 -4.7 -4.44797 | CCGCCATGGGCGTAG CAGGC TTG GCCAG TTTTAATATTGATAA TERM 2605 2718138 - 2718150 + G 72 -10.5 -2.76313 | overlap 2718135 2718139 AGAATGCATTGCTTT GCGCC ATT GGCGC TGCTCTTGGCGTTGT Patl_2241 2717114 - 2718340 + | hypothetical protein Patl_2242 2719275 - 2718367 - | hypothetical protein TERM 2606 2718781 - 2718816 + g 86 -14.8 -2.53263 | opp_overlap 2718779 2718777 ATCATTAAAACTATC GCGGTTTTCGATGACC AGCA GGTTGTCGAAATCCGC TAAATTCAGCCTAGC Patl_2243 2720555 - 2719281 - | hypothetical protein TERM 2607 2720267 - 2720285 + g 72 -8.9 -3.63782 | opp_overlap 2720257 CTAAATGTTCGCCCA CGTCAGA GTTGA TCTGACG TTTGCGCTCATCTTG TERM 2608 2720291 - 2720319 + g 71 -10.4 -2.75481 | gap 1, opp_overlap 2720257 TGATCTGACGTTTGC GCTCATC-TTGGG TTAA CCCAGCGATGAGC TCATTAACATTAGGG Patl_2244 2721175 - 2720552 - | hypothetical protein Patl_2245 2724873 - 2721172 - | hypothetical protein TERM 2609 2722977 - 2722991 + g 89 -5.6 -5.80727 | opp_overlap 2722973 2722977 GATGCAATTGATCAA GCTCTG CTT CAGCGC TTTTTTGTTCTTTTT TERM 2610 2723360 - 2723385 + g 70 -2.5 -5.00616 | gap 1, overlap 2723364 TCACGTTTGTGCTGG CACTGCTGATGC AAA GCTTCAGCT-TG TTTTTTAGCACCAGA TERM 2611 2723364 - 2723382 + g 89 -8.8 -4.61482 | overlap 2723360 GTTTGTGCTGGCACT GCTGATGC AAA GCTTCAGC TTGTTTTTTAGCACC TERM 2612 2723587 - 2723597 + g 91 -8.2 -4.92756 | CTGCTCGAATTGGCT GCGC AGA GCGC TTTCTTTTTCATGAT TERM 2613 2726356 - 2726366 + H 72 -3.2 -5.03314 | GGCGAATTTGGTTTT GCTT TTT GAGC TTTTTTGAGAATAAA Patl_2246 2726999 - 2729290 + | diguanylate cyclase/phosphodiesterase Patl_2247 2731025 - 2729490 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 2614 2730066 - 2730045 - G 77 -11.7 -2.82015 | opp_overlap 2730036 2730032 CGCAGAGCCAGCAGA TTTAGCCAC ATCA GTGGCTAAA TCGCCAACTTTGTTC TERM 2615 2730123 - 2730137 + g 76 -4.2 -4.96762 | TTGGCGGCAATCTTG GTGAAC ACT GGTCAC TTTTTCTGATGTGTG TERM 2616 2731261 - 2731247 - R 89 -4.4 -5.65496 | CATTAAAAACAAAAA TTTAAT CAT ATTAAA AGTCAGTACAAATAT Patl_2248 2732311 - 2731316 - | response regulator receiver modulated metal dependent phosphohydrolase Patl_2249 2735779 - 2732348 - | multi-sensor hybrid histidine kinase TERM 2617 2734851 - 2734864 + g 72 -8.1 -3.70925 | overlap 2734846 GACGTGTTTATGGTT GCACG CAAC CGTGC TTCATTTATTCGTGC TERM 2618 2735124 - 2735095 - G 75 -9.5 -3.56568 | gap 1, opp_overlap 2735095, overlap 2735098 TAACGATTGCGGAAA TGACGTTACGATAA ACT TTACCGTAACG-CA TAGTATCCATGAAGG TERM 2619 2735122 - 2735098 - G 79 -12.3 -2.91144 | opp_overlap 2735095, overlap 2735095 CGATTGCGGAAATGA CGTTACGATAA ACT TTACCGTAACG CATAGTATCCATGAA Patl_2250 2735920 - 2736387 + | hypothetical protein TERM 2620 2737176 - 2737196 + G 81 -12.7 -3.19668 | opp_overlap 2737175 2737174 2737172 ACTTGCGTAAACAGC TCGATGCTT ATG AAGCATCGA TTACGTTAGATACTG Patl_2251 2736527 - 2737249 + | two component transcriptional regulator Patl_2252 2737324 - 2738556 + | histidine kinase TERM 2621 2740030 - 2740017 - g 74 -8.1 -3.90874 | opp_overlap 2740017 CAAAAAATACTCAAA GGCCT ATCT AGGCC TTATCATTTACAGAG TERM 2622 2740139 - 2740127 - g 77 -3.4 -5.15634 | TAGCTTATTAAAAAA TGCT GATCA AGCA ATGTATGGTGCGAAA Patl_2253 2738649 - 2740991 + | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 2623 2741366 - 2741346 - g 93 -6.1 -5.72616 | ATTGATAGAAAAAAA CGCCCATCC TGA AGATAAGCG CAGCCAAATTTTAAC Patl_2254 2741107 - 2741541 + | MarR family transcriptional regulator Patl_2255 2742547 - 2741552 - | aldo/keto reductase Patl_2256 2742736 - 2743641 + | AraC family transcriptional regulator Patl_2257 2743669 - 2747001 + | MscS mechanosensitive ion channel Patl_2258 2747216 - 2749342 + | TonB-dependent receptor Patl_2259 2750167 - 2749403 - | FAD-binding 9, siderophore-interacting TERM 2624 2750304 - 2750281 - R 86 -7.5 -5.04733 | gap 1, opp_overlap 2750280 2750278 2750281 GAACCATAAACAAAA CGCCT-GATC GTAAT GATCTAGGCG CTCTATTCTTTTGCT Patl_2260 2751179 - 2750349 - | hypothetical protein TERM 2625 2750616 - 2750626 + g 74 -5.4 -4.58283 | TGTGCCGATTTGCGC TGGT GGC ACCA TTTTTCCACCGGTTC Patl_2261 2752019 - 2751309 - | hypothetical protein TERM 2626 2751910 - 2751900 - G 74 -6.8 -4.20749 | overlap 2751901 TAACACTGCAACAAA CCCT AAT AGGG CTAGGTAAATTTTTT Patl_2262 2752298 - 2752026 - | XRE family transcriptional regulator Patl_2263 2754121 - 2752487 - | sodium/hydrogen exchanger TERM 2627 2753133 - 2753157 + g 74 -3.6 -4.94058 | gap 1, opp_overlap 2753133, overlap 2753135 CCTATTTGGCACAAA GCGATGGCAGT TTTA ACTGC-ATCAC TTTTGTTTGACTTGC TERM 2628 2753838 - 2753821 - G 73 -4.1 -4.82154 | AAGCGATAGCAAAAA TGAGCAG CGCA CTACCCA CGACTTGCACGAACC TERM 2629 2756288 - 2756275 - g 76 -8.1 -4.1196 | opp_overlap 2756273 2756275, overlap 2756263 AAGCGATTTTTAAAA GCGTG GCAG CACGC TGATTTTGAGCTTAG Patl_2264 2754457 - 2756322 + | hypothetical protein TERM 2630 2756552 - 2756534 - g 74 -3.8 -4.98531 | GGCGCAAATTAAAAA CACCCA AGAGTTA TGGGCG TTACAAGATAAAACC TERM 2631 2756579 - 2756566 - g 71 -3.8 -4.73682 | CGTTACAAGATAAAA CCAG TGACGG CTGG GTAATATTAGATTCG Patl_2265 2756484 - 2756843 + | hypothetical protein TERM 2632 2756956 - 2756992 + T 100 -15.3 -3.78953 | CTTTACTAGTATCGT CTCATTGAGAGCACAAT TTT ACTGCGCTCTCAATGAG TTTACTCCTCAAGGT Patl_2267 2758762 - 2757377 - | gluconate transporter TERM 2633 2757446 - 2757462 + g 77 -3.7 -5.17353 | GGTTTCCATTACTGT CCATGTT TTC AATGTGG TTTTTTCATCCATAT TERM 2634 2758429 - 2758441 + g 71 -6.9 -4.1891 | opp_overlap 2758420 2758437 2758438, overlap 2758433 ACGAAGCGACACCCA GTGCC AAA GGCGC TTTGTCTTCGCCAAA TERM 2635 2758722 - 2758691 - G 89 -11 -4.16837 | opp_overlap 2758694, overlap 2758694 CACAATTAGAAATAA CAACGCTAGCAC AGCGCCAA GTGCTAGCGTTA ATAAGTACCAGGGTT TERM 2636 2758694 - 2758719 + g 74 -10.5 -3.18264 | opp_overlap 2758694 2758691 AATTAGAAATAACAA CGCTAGCAC AGCGCCAA GTGCTAGCG TTAATAAGTACCAGG TERM 2637 2758719 - 2758694 - G 87 -10.5 -4.18213 | opp_overlap 2758694, overlap 2758691 AATTAGAAATAACAA CGCTAGCAC AGCGCCAA GTGCTAGCG TTAATAAGTACCAGG Patl_2268 2759349 - 2758996 - | endoribonuclease L-PSP Patl_2269 2762418 - 2759545 - | UvrD/REP helicase TERM 2638 2760946 - 2760925 - G 71 -3.8 -4.79352 | overlap 2760927 GTATTGATAATAAAA TAGTTCAA TACATC TTGAACCA TGATAGCTATACAGT TERM 2639 2761213 - 2761228 + g 75 -6.2 -4.42238 | TACCGGCTCCCCTTT CAATGT ACGC ACATTG TTTTCATTCAAATAA Patl_2270 2763257 - 2762637 - | hypothetical protein TERM 2640 2764457 - 2764470 + G 84 -8.1 -4.70879 | CAGTATTTACTTACT TGGGC CAGC GCCCA TTTTTCGACTTTCGA Patl_2271 2764211 - 2764723 + | hypothetical protein Patl_2272 2764799 - 2765425 + | hypothetical protein Patl_2273 2766147 - 2765464 - | putative hydroxylase TERM 2641 2766259 - 2766248 - R 72 -4.4 -4.78848 | GCGCGAAATACAAAA TCAG CCAG CTGA TTAACGTTAATAAAT Patl_2274 2767375 - 2766266 - | (S)-2-hydroxy-acid oxidase TERM 2642 2766833 - 2766819 - G 82 -7.1 -4.8622 | GGGGGTAATGAAAAA CCAGC TCTTT GCTGG CGATTACGAAGGCCG TERM 2643 2767431 - 2767403 - R 100 -9.6 -5.80951 | opp_overlap 2767403 ACCCAAAACAAAAAA GGGAGCACGTTG TAAAC CAACCTACTCCC TTGATTAAATTACAC Patl_2275 2769815 - 2767476 - | TonB-dependent receptor Patl_2276 2770832 - 2769822 - | TonB family protein TERM 2644 2769867 - 2769882 + g 82 -7.6 -4.64076 | TGAATATTCAATGGG GATCAC GAGC GTGATC TTTTCTCGTTTAATT TERM 2645 2769959 - 2769976 + g 85 -3.4 -5.55664 | GCGCAGCCTTATCCA GTTCAG CTGAGC CTGAGC TTTTTTTGATGCTAG TERM 2646 2770795 - 2770809 + g 78 -5.7 -4.84311 | GATTGACTGGCCATG CACTG TTGTT CAGTG TTTTGTTGTGTAGCA Patl_2277 2771251 - 2770832 - | biopolymer transport protein ExbD/TolR Patl_2278 2771673 - 2771248 - | biopolymer transport protein ExbD/TolR Patl_2279 2772380 - 2771679 - | MotA/TolQ/ExbB proton channel Patl_2280 2773893 - 2772868 - | hypothetical protein TERM 2647 2773357 - 2773334 - G 70 -9 -3.31322 | gap 1 TCGAACTCGGGATAA TCT-GCGGTTA ACA TAACCGCGAGA TCCATCGATAAGTAC Patl_2281 2776770 - 2773921 - | FAD linked oxidase-like TERM 2648 2774694 - 2774716 + g 76 -4.8 -4.75372 | overlap 2774695 TCCCTTTACTGGGCC ACTGACTTTG CCA CAAAGGCAGA TTTTTCGTAGATAAT TERM 2649 2777897 - 2777877 - g 73 -10.5 -3.07227 | TGAGGAAACGACACA CCATAGCCT TGA AGGCTATGA AAAAGGTGTCGTGAC Patl_2282 2777770 - 2779401 + | phosphoenolpyruvate carboxykinase TERM 2650 2779408 - 2779394 - f 77 -7.8 -4.14739 | TTAGCCATGCTAAAA GCGCGT AGA ACACGC TAACCTCATTTACTG TERM 2651 2779466 - 2779437 - f 84 -12.3 -3.06315 | opp_overlap 2779440, overlap 2779440 TGAATATTGTTAACA TAAGCAGGTACAC CTAA GTGTATCTGCTTA GCTCCTCTTCCACTT TERM 2652 2779440 - 2779463 + F 83 -11.8 -3.13432 | opp_overlap 2779437 2779440 ATATTGTTAACATAA GCAGGTACAC CTAA GTGTATCTGC TTAGCTCCTCTTCCA TERM 2653 2779463 - 2779440 - f 79 -9.6 -3.67052 | opp_overlap 2779440, overlap 2779437 ATATTGTTAACATAA GCAGGTACAC CTAA GTGTATCTGC TTAGCTCCTCTTCCA Patl_2283 2779649 - 2780005 + | hypothetical protein Patl_2284 2780382 - 2782100 + | sodium/hydrogen exchanger TERM 2654 2782210 - 2782197 - g 78 -6.7 -4.67552 | GCTAGCAAAAAATAA TCAGG TCGA CCTGA CGGTGCTCCTTGTAC Patl_2285 2782102 - 2783073 + | hypothetical protein TERM 2655 2783918 - 2783939 + G 70 -9.5 -3.11619 | gap 1, opp_overlap 2783916 AGGTCGTTGAAATCG GTGCG-TCAC TCG GTGATCGCAC TTGCATGGCTTATTC Patl_2286 2783347 - 2786061 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Patl_2287 2787022 - 2786213 - | ferredoxin--NADP(+) reductase TERM 2656 2787232 - 2787197 - H 100 -15 -3.91716 | opp_overlap 2787199 2787205 2787208, overlap 2787199 TCACTTGTTAAATAA GACACCAAGAACTTAA ACGT TTAAGTTCTTGGTGTT ATAGGCTATCGTTAA TERM 2657 2787199 - 2787230 + H 100 -17.6 -3.35706 | opp_overlap 2787199 2787197, overlap 2787205 2787208 ACTTGTTAAATAAGA CACCAAGAACTTAA ACGT TTAAGTTCTTGGTG TTATAGGCTATCGTT TERM 2658 2787230 - 2787199 - H 100 -17.6 -3.54755 | opp_overlap 2787199 2787205 2787208, overlap 2787197 ACTTGTTAAATAAGA CACCAAGAACTTAA ACGT TTAAGTTCTTGGTG TTATAGGCTATCGTT TERM 2659 2790039 - 2790028 - g 71 -3.6 -4.90381 | GGGAACATAACAAAA CCCC TGAT GAGG CGTATGAGCACATCA TERM 2660 2790813 - 2790790 - g 70 -5.2 -4.44915 | overlap 2790779 TAACCAGTGATAAAA CTGCCAGCGA CGCA TCGCCTACAG AAGCACAAGAGTAGG Patl_2288 2787537 - 2790827 + | phosphorylase kinase alphabeta TERM 2661 2790897 - 2790925 + F 100 -12.6 -4.7497 | opp_overlap 2790897 ATTTTTTATTGTAAA GGCACTAGGTTT ACATC AAATCTAGTGCC TTTTTCGTCAGTAGG TERM 2662 2790925 - 2790897 - f 82 -11.1 -3.60098 | opp_overlap 2790897 ATTTTTTATTGTAAA GGCACTAGGTTTA CAT CAAATCTAGTGCC TTTTTCGTCAGTAGG Patl_2289 2791181 - 2791795 + | lysine exporter protein LysE/YggA Patl_2290 2792536 - 2791889 - | two component LuxR family transcriptional regulator Patl_2291 2793927 - 2792533 - | periplasmic sensor signal transduction histidine kinase Patl_2292 2794171 - 2795244 + | TRAP dicarboxylate transporter- DctP subunit TERM 2663 2795249 - 2795288 + F 93 -13.8 -3.18796 | opp_overlap 2795251, overlap 2795242 2795251 CAAACGAGTAACAAA AAGGCTTGAAGACTCA GTTTAATG TGAGTCTTCAAGCCTA TTCCCTGTCCTTTTA TERM 2664 2795286 - 2795251 - f 100 -16.4 -5.16071 | opp_overlap 2795249 2795242 2795251 AACGAGTAACAAAAA GGCTTGAAGACTCA GTTTAATG TGAGTCTTCAAGCC TATTCCCTGTCCTTT TERM 2665 2795251 - 2795286 + F 100 -16.4 -3.14414 | opp_overlap 2795251, overlap 2795249 2795242 AACGAGTAACAAAAA GGCTTGAAGACTCA GTTTAATG TGAGTCTTCAAGCC TATTCCCTGTCCTTT Patl_2293 2795386 - 2795916 + | tripartite ATP-independent periplasmic transporter DctQ TERM 2666 2796336 - 2796308 - g 72 -5.4 -4.41633 | gap 1, opp_overlap 2796312 CATGCTTAAAAATAA TTATCACCAACCG ACCG CAGCTGGTG-TAA TATGCGCCGCCGGCA Patl_2294 2795916 - 2797196 + | TRAP dicarboxylate transporter, DctM subunit TERM 2667 2798039 - 2798025 - g 72 -8.6 -3.71649 | TTCTTAAACTGGAAA TTGGGT TAT ACCCAA GGCAAGCACGCGGTT Patl_2295 2797215 - 2798246 + | hypothetical protein Patl_2296 2798350 - 2798730 + | hypothetical protein TERM 2668 2798746 - 2798715 - T 100 -11.8 -4.98436 | opp_overlap 2798718 2798723, overlap 2798718 2798723 TCAAGACTACAAAAA CAATAAAAGCGACT GATT AGTCGCTTTTATTT TGAACCAAATGAGCG TERM 2669 2798718 - 2798743 + T 100 -13.5 -4.08216 | opp_overlap 2798718 2798715 2798723, overlap 2798723 AGACTACAAAAACAA TAAAAGCGACT GATT AGTCGCTTTTA TTTTGAACCAAATGA TERM 2670 2798743 - 2798718 - T 100 -13.5 -4.57057 | opp_overlap 2798718 2798723, overlap 2798715 2798723 AGACTACAAAAACAA TAAAAGCGACT GATT AGTCGCTTTTA TTTTGAACCAAATGA TERM 2671 2798738 - 2798723 - T 93 -9 -5.18715 | opp_overlap 2798718 2798723, overlap 2798718 2798715 ACAAAAACAATAAAA GCGACT GATT AGTCGC TTTTATTTTGAACCA TERM 2672 2798723 - 2798738 + T 90 -9 -5.07652 | opp_overlap 2798723 2798718 2798715, overlap 2798718 ACAAAAACAATAAAA GCGACT GATT AGTCGC TTTTATTTTGAACCA Patl_2297 2799338 - 2798796 - | superoxide dismutase, copper/zinc binding Patl_2298 2799741 - 2800136 + | hypothetical protein TERM 2673 2800127 - 2800145 + F 72 -8.8 -3.48684 | opp_overlap 2800124 GCAAACAAAACGCGC CGCCACAT AAC AGGTGGCG TTCTGCTGATTGTGG Patl_2299 2800292 - 2800537 + | hypothetical protein TERM 2674 2800690 - 2800715 + T 100 -14.9 -3.52787 | opp_overlap 2800690 GGCTTTCACAAAAAA CAGAGCATCTT TTGC AAGATGCTCTG TTGTAATGTTAAATG TERM 2675 2800715 - 2800690 - T 100 -14.9 -5.24129 | opp_overlap 2800690 GGCTTTCACAAAAAA CAGAGCATCTT TTGC AAGATGCTCTG TTGTAATGTTAAATG Patl_2300 2801205 - 2800762 - | protein of unknown function, Spy-related TERM 2676 2800944 - 2800982 + g 71 -10.2 -2.7264 | opp_overlap 2800949 2800968, overlap 2800943 2800952 2800980 GACTAAGCTCTTGCT CATAACTGGCGTCGCTGG GAT CAAGCGCCGCTAGTTGCG CTTTAAGCGACGTTT TERM 2677 2802030 - 2802012 - g 71 -3.8 -4.87786 | overlap 2802013 CGAATTCGACAAAAA CTATCCTC ACA GGGGATAA ACGATGTGATCAAGT Patl_2301 2801373 - 2802107 + | two component transcriptional regulator Patl_2302 2802110 - 2803462 + | periplasmic sensor signal transduction histidine kinase Patl_2303 2804794 - 2803538 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Patl_2304 2805191 - 2804883 - | ferredoxin Patl_2305 2806445 - 2805288 - | cytochrome P450 Patl_2306 2807527 - 2806652 - | AraC family transcriptional regulator Patl_2307 2807682 - 2808800 + | zinc-binding alcohol dehydrogenase Patl_2308 2808814 - 2809626 + | putative esterase TERM 2678 2809656 - 2809620 - T 100 -12.5 -4.98758 | AAAAAGTCATAAAAA GCGATAAAAAGCAGC GTAGTGA GTTGCTTTTTATCGC ACTGAGAATGTAAAT Patl_2309 2810389 - 2809739 - | signal peptidase I TERM 2679 2812456 - 2812446 - g 74 -8.2 -3.97636 | opp_overlap 2812445 2812446 ACGGCAACTTACAAA GCGC CTA GCGC GCGTGTTTAGGCAGT TERM 2680 2812550 - 2812587 + G 71 -7.7 -4.00934 | GTGACGCGCCCCTGT TGGCTCAGCGCTTACTT GATG AAGTCAGCGCTAGTCCA TTTCGTCTTTCAGAT Patl_2310 2810713 - 2812869 + | diguanylate cyclase TERM 2681 2813425 - 2813457 + G 76 -9.3 -3.65827 | gap 1, opp_overlap 2813451, overlap 2813444 CTGCGTTCCTATTCA GGCGTG-TATTGTC CATCAT GACGATACCACGCC TTTGGCTGCGGCTTC Patl_2311 2813027 - 2814148 + | alcohol dehydrogenase GroES-like protein TERM 2682 2814163 - 2814191 + F 81 -11.8 -2.8742 | overlap 2814159 2814184 ATTATTTGCCTGACG TTTCACTGAGGG GGTAA CCCTCAGTGAAC TACTTACTGTTTACA TERM 2683 2815001 - 2814988 - g 79 -3.1 -5.33331 | TAAAGACAACAAAAA CACCA GCAT TGATG TAACCGGTAATCGGC Patl_2312 2814356 - 2815264 + | LysR family transcriptional regulator Patl_2313 2816150 - 2815323 - | response regulator receiver protein TERM 2684 2816236 - 2816222 - H 85 -7.2 -4.93877 | TTTGAGTAAATAAAA CAGAAT CCT ATTCTG AAATGTCTGATTAAT TERM 2685 2816737 - 2816753 + H 70 -2.9 -5.14563 | overlap 2816738 CAGTGTGACGATCAG TGAATGG TAA CCAATCG TTTTTTAATGGAGCA Patl_2314 2816775 - 2818733 + | dentin sialophosphoprotein TERM 2686 2818796 - 2818767 - f 100 -18.1 -4.0616 | opp_overlap 2818767 2818770, overlap 2818770 2818793 CATTTCAAGGATAAA TAAGTTACTGGCG GCAG CGCCAGTAACTTA TTAATAAGGATACTA TERM 2687 2818767 - 2818796 + F 100 -18.1 -3.15861 | opp_overlap 2818767 2818770 2818793, overlap 2818770 CATTTCAAGGATAAA TAAGTTACTGGCG GCAG CGCCAGTAACTTA TTAATAAGGATACTA TERM 2688 2818770 - 2818793 + F 100 -15.4 -3.72324 | opp_overlap 2818767 2818770, overlap 2818767 TTCAAGGATAAATAA GTTACTGGCG GCAG CGCCAGTAAC TTATTAATAAGGATA TERM 2689 2818793 - 2818770 - f 100 -15.4 -4.1523 | opp_overlap 2818770 2818767, overlap 2818767 TTCAAGGATAAATAA GTTACTGGCG GCAG CGCCAGTAAC TTATTAATAAGGATA TERM 2690 2819052 - 2819079 + G 85 -3.5 -5.55695 | gap 3, opp_overlap 2819047 AATAACACAATTGAT CG-CGGCTCG-TTC AAT GAAGCG-GCCGGCG TTTTTTCTATTATTC Patl_2315 2818815 - 2819162 + | hypothetical protein Patl_2316 2819182 - 2819853 + | peptidase C39, bacteriocin processing Patl_2317 2819869 - 2820351 + | hypothetical protein Patl_2318 2821822 - 2820497 - | hypothetical protein TERM 2691 2822023 - 2821995 - R 95 -9 -5.39755 | opp_overlap 2821995 GATAAGTATAAAAAA CACCCAATACCA GTCAT TAATATTGGGTG TTATGAGTTTTAATG Patl_2319 2824415 - 2822118 - | TonB-dependent receptor TERM 2692 2822228 - 2822215 - G 72 -8.1 -3.69216 | overlap 2822213 GGCGCACCTAAAATA GCACC TATG GGTGC CGCCGGCGGTCCGCT TERM 2693 2823104 - 2823118 + g 74 -8.6 -4.00934 | opp_overlap 2823103 CTGATTGAATAAACG CAGACA GCG TGTCTG TTTGCTGTTTGAAAT TERM 2694 2824125 - 2824087 - G 72 -6.7 -4.28548 | gap 1 ACCGATTGATCAAAA GACTGTGTGCGAG-CAGG CGTG CCTAACCCGCGCAAAGTC AGCGCTAAGCCGTCA Patl_2320 2824739 - 2825614 + | putative cyclase TERM 2695 2825660 - 2825626 - f 70 -7.9 -3.62518 | opp_overlap 2825617 2825626, overlap 2825616 2825627 GTAAACAGGTCGAAA CCGCGGGTTTATCTG TCATG CATATAAATCCGCGA TGTCTCCCGATTTTG TERM 2696 2825899 - 2825879 - g 86 -3.1 -5.79595 | overlap 2825864 2825880 2825881 CCGCAAAACAAAAAA TTGCGGCCA ATT TGACCGCCC TATCCCAATCCTTGA TERM 2697 2825897 - 2825881 - g 70 -10.1 -3.02051 | overlap 2825864 2825880 2825879 GCAAAACAAAAAATT GCGGCCA ATT TGACCGC CCTATCCCAATCCTT TERM 2698 2826143 - 2826155 + G 77 -9.1 -4.0031 | TCGTAGGTTGCCATT GGTGG AAC CCACC TTATTTAGTGCCGCT Patl_2321 2825740 - 2826651 + | 3-hydroxyacyl-CoA dehydrogenase Patl_2322 2826655 - 2827587 + | hypothetical protein Patl_2323 2827679 - 2828023 + | cupin 2, barrel Patl_2324 2828023 - 2828823 + | short-chain dehydrogenase/reductase SDR TERM 2699 2829730 - 2829712 - g 77 -3.8 -5.25656 | AAAACGATTAAAAAA GCACTG TGGATAG CAGCGC CCGTTAATGGTTTAT Patl_2325 2828902 - 2830371 + | Na+/solute symporter TERM 2700 2830675 - 2830652 - T 100 -16.8 -4.59109 | opp_overlap 2830652 CACACTTCGTAAAAA GGGCGCCATA TTGC TATGGCGCCC TTTTTGATTGTAAAT TERM 2701 2830652 - 2830675 + T 100 -16.8 -4.93968 | opp_overlap 2830652 CACACTTCGTAAAAA GGGCGCCATA TTGC TATGGCGCCC TTTTTGATTGTAAAT Patl_2326 2831475 - 2830702 - | IclR family transcriptional regulator Patl_2327 2832016 - 2831609 - | DoxX TERM 2702 2831809 - 2831795 - G 72 -2.7 -5.06414 | opp_overlap 2831795 2831796, overlap 2831796 2831804 GCCGGCTAATAAAAA TGCCG CAAAT CGGCC TTTAAAACCGATAAT TERM 2703 2832111 - 2832126 + H 80 -4.7 -5.24129 | TAAACTAGGAAGGGC TGCTC TTTACT GAGCA TTTTTTATCGAGCCA TERM 2704 2833461 - 2833437 - g 72 -6.3 -4.2704 | CTTATCATCAATAAA CCGGCCCAGTT GTT ATCTGTACCGG GTAAGCATATCAGTG TERM 2705 2833758 - 2833747 - g 74 -3.6 -5.0538 | GCGTATGTGAAAAAA CCGG CAAA CCAG CCCACACCACGTGGC Patl_2328 2832309 - 2834012 + | pseudouridine synthase Patl_2329 2834121 - 2835560 + | major facilitator transporter TERM 2706 2835585 - 2835605 + T 100 -14.1 -5.52909 | opp_overlap 2835585 GCCAACACAAAAAAA GAGTTGCTC TAG GAGCAACTC TTTTTTTAAATATTG TERM 2707 2835605 - 2835585 - T 100 -14.1 -5.80817 | opp_overlap 2835585 GCCAACACAAAAAAA GAGTTGCTC TAG GAGCAACTC TTTTTTTAAATATTG Patl_2330 2836941 - 2835661 - | DEAD/DEAH box helicase-like TERM 2708 2836023 - 2836005 - G 72 -8.8 -3.51076 | overlap 2836001 TCACTACATAATCAA GGCCTTGA ATA TCTAGGCC GCGGGCCGCCACTTC TERM 2709 2837345 - 2837335 - R 70 -3.2 -4.84539 | GAAGTAAACATAAAA TAGG TTT CCCA GGCATTGATGAAAAA Patl_2331 2838431 - 2837508 - | LysR family transcriptional regulator TERM 2710 2839174 - 2839162 - g 72 -9.1 -3.53563 | ATAGCTGTTGTCAAA GCCAG TTA CTGGC ACAAGCTGCGGGGCC Patl_2332 2838513 - 2839319 + | hypothetical protein TERM 2711 2839347 - 2839376 + T 73 -9.4 -3.11291 | opp_overlap 2839338, overlap 2839349 AACCTAGCCTATCGA GATGAACAACGC TGTTAC GCCTTGTTCATC TATTGGCGTTATCAG Patl_2333 2840308 - 2839388 - | hypothetical protein TERM 2712 2839457 - 2839467 + g 72 -8.2 -3.7108 | CAGAACGCACTCTTC CGGC GTA GCCG TTTCGCTATCAGGAT Patl_2334 2840918 - 2840532 - | hypothetical protein Patl_2335 2841696 - 2841058 - | metal dependent phosphohydrolase Patl_2336 2842206 - 2841871 - | hypothetical protein Patl_2337 2843108 - 2842332 - | extracellular solute-binding protein TERM 2713 2842854 - 2842866 + g 78 -6.3 -4.56597 | AAACACTGAATATTC TTCAC GAT GTGAA TTTTTGAAAGAACAG Patl_2338 2845868 - 2843349 - | Alpha-glucosidase Patl_2339 2846784 - 2845918 - | putative esterase Patl_2340 2848784 - 2846832 - | alpha amylase, catalytic region TERM 2714 2850466 - 2850454 - g 73 -2 -5.11937 | AACAAGCGGAAAAAA TTGT TGTGC ACAA GTACGGCGCGCCTGC Patl_2341 2849088 - 2852603 + | agarase Patl_2342 2852635 - 2853162 + | hypothetical protein Patl_2343 2853440 - 2853937 + | putative GAF sensor protein Patl_2344 2855309 - 2854044 - | DNA-directed DNA polymerase Patl_2345 2855713 - 2855309 - | putative prophage repressor TERM 2715 2855561 - 2855548 - G 70 -2.3 -5.00884 | AGTCGCCGGAAAAAA TACCG TCTC CGGTC ATCGACTCCCCCTGT TERM 2716 2855743 - 2855706 - G 71 -9.5 -3.19169 | gap 1, overlap 2855705 TTAATAGGAATAAAT TTCAACATACACTGT-TA TTA TATACAGTATATGTCGAA TTCAAATAACTTTAA Patl_2347 2856590 - 2856994 + | hypothetical protein Patl_2348 2859393 - 2857084 - | DNA polymerase III, epsilon subunit TERM 2717 2858524 - 2858535 + g 71 -3.6 -4.8048 | overlap 2858521 GGTTTCTCTGATCAA GCGC TCTT GTGC TTTTTGGTGTGAAGA Patl_2349 2859925 - 2859440 - | hypothetical protein Patl_2350 2860297 - 2861403 + | hypothetical protein TERM 2718 2861452 - 2861465 + T 73 -8.1 -3.87373 | overlap 2861459 TTTATCACACTCACT TGGCG CAGG CGCCA TTTATGGCGCCTATA TERM 2719 2861459 - 2861476 + T 84 -12.7 -3.00994 | overlap 2861452 CACTCACTTGGCGCA GGCGCCA TTTA TGGCGCC TATATATAAAATTAA Patl_2351 2862541 - 2861567 - | HPP domain-containing protein TERM 2720 2862298 - 2862286 - G 70 -9.1 -3.35679 | overlap 2862288 2862289 GGTGCCCACCGATAA CAGCC CAC GGCTG CGAAAGCGCCCCGTG Patl_2352 2863430 - 2862771 - | hypothetical protein TERM 2721 2864124 - 2864107 - g 72 -5.5 -4.50159 | opp_overlap 2864108, overlap 2864108 GGCAAGTTAAATAAA GGCCTTG GCCG CAAGGCT GTTAAAGCCATTGAA TERM 2722 2864180 - 2864167 - g 74 -8.1 -3.94746 | CCAGATCGAAGCAAA GCCGA GGGC TCGGC GAAATCTTTGCAGGA Patl_2353 2863774 - 2864739 + | hypothetical protein Patl_2354 2864861 - 2865148 + | hypothetical protein TERM 2723 2865136 - 2865126 - T 72 -4.6 -4.7373 | TTATGCTAGTAAAAA CCCG TGA CGAG AAAGACTTCTAGGCT TERM 2724 2865329 - 2865310 - T 88 -8.6 -4.76041 | opp_overlap 2865308 2865310 CACATTCATCAAAAA GCGCTATC CACA GATAGCAC TATTTGGCATTCCCC Patl_2355 2865932 - 2865348 - | hypothetical protein TERM 2725 2865958 - 2865936 - R 71 -7 -4.00066 | opp_overlap 2865936 TGTAGAATGCATAAA GCCGGCAA GGATAAG TTACCGGC TTTTTATTATGGGTA TERM 2726 2865936 - 2865958 + r 83 -4.8 -5.20333 | opp_overlap 2865936 TGTAGAATGCATAAA GCCGGCAA GGATAAG TTACCGGC TTTTTATTATGGGTA Patl_2356 2868657 - 2866018 - | DNA topoisomerase I TERM 2727 2866964 - 2866976 + g 71 -7.7 -3.8594 | TCTTTCCACGAGACT TTGCC GTT GGCAA TTTCATCTAGCTCTT TERM 2728 2868457 - 2868475 + g 85 -6 -5.44721 | GCGATATTCATGCTC GCGTAAAT ACG ATTCACGC TTTTTTTCCGATAAT Patl_2357 2868973 - 2870313 + | succinylarginine dihydrolase TERM 2729 2870386 - 2870413 + T 100 -17.2 -4.14056 | opp_overlap 2870386 GAGAGCATAAAAAAA GCCCTATATCAC GGTT GTGATATAGGGC TTTCTAGTTTGAAAT TERM 2730 2870413 - 2870386 - T 100 -17.2 -5.69473 | opp_overlap 2870386 GAGAGCATAAAAAAA GCCCTATATCAC GGTT GTGATATAGGGC TTTCTAGTTTGAAAT Patl_2358 2872619 - 2870436 - | Ig-like, group 1 Patl_2359 2872745 - 2874094 + | sodium:dicarboxylate symporter TERM 2731 2874176 - 2874142 - T 95 -15.2 -2.89793 | opp_overlap 2874147, overlap 2874147 CGAGCCATAGAATGA TAAAAGGCAGTGCATT AAA AACGCACTGCCTTTTT TATGGTTGAGTTTTA TERM 2732 2874171 - 2874147 - T 100 -15.1 -4.60073 | opp_overlap 2874147, overlap 2874142 CATAGAATGATAAAA GGCAGTGCATT AAA AACGCACTGCC TTTTTTATGGTTGAG TERM 2733 2874147 - 2874171 + T 100 -12.9 -5.37345 | opp_overlap 2874147 2874142 CATAGAATGATAAAA GGCAGTGCATT AAA AACGCACTGCC TTTTTTATGGTTGAG Patl_2360 2875447 - 2874212 - | LolC/E family lipoprotein releasing system, transmembrane protein Patl_2361 2876144 - 2875461 - | lipoprotein releasing system, ATP-binding protein Patl_2362 2877234 - 2876185 - | hypothetical protein Patl_2363 2879374 - 2877929 - | hypothetical protein TERM 2734 2878104 - 2878120 + g 72 -2.9 -5.00895 | overlap 2878105 TTCTGGTTTAAAACC TCGCTAA CCG TGAGCGG TTTTTCTCTGGTAAC Patl_2364 2880111 - 2879404 - | DNA polymerase III, epsilon subunit Patl_2365 2880192 - 2880653 + | ribonuclease H TERM 2735 2880680 - 2880698 + T 77 -10.3 -3.2963 | opp_overlap 2880680 CTAGTTCTGTGCAAA GGAGCCA ATGAC TGGCTCC TTCTAAGGCACTACT TERM 2736 2880698 - 2880680 - T 82 -11 -3.53444 | opp_overlap 2880680 CTAGTTCTGTGCAAA GGAGCCAA TGA CTGGCTCC TTCTAAGGCACTACT Patl_2366 2881065 - 2880709 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2737 2882017 - 2882007 - g 87 -6.8 -5.1523 | GTCACAATACAAAAA CAGC GTT GCTG AAGCCAGAGGGCTGT Patl_2367 2881294 - 2883156 + | signal peptide peptidase SppA, 67K type TERM 2738 2883165 - 2883214 + F 70 -8.2 -3.71848 | gap 1 TATTTAGTAAATCTT TTAGCCGCGTCAATGTGTTATTT TTATT GAATAATACATTGGC-CTGCTAA TTATTCCTCAAACCA TERM 2739 2883370 - 2883330 - g 70 -9.2 -3.31501 | gap 2, overlap 2883331 2883366 AGCAATGTTGTAGAA CGC-G-TGCGTATTTGCATG GAG CAAGCAAATACGCAACTGCA AAGCAACCTAGCTAT TERM 2740 2883366 - 2883331 - g 71 -10.6 -2.58579 | gap 1, overlap 2883330 GCAATGTTGTAGAAC GCGTGCGTATTTGCATG GAG CAAGCAAATACGCA-AC TGCAAAGCAACCTAG Patl_2368 2883264 - 2883794 + | protein of unknown function DUF335, SprT Patl_2369 2884237 - 2883791 - | hypothetical protein Patl_2370 2884496 - 2885446 + | thioredoxin reductase TERM 2741 2885462 - 2885477 + F 90 -10.4 -4.43477 | opp_overlap 2885462 ACGTTCTACAGATAA GGCCTC ACAT GAGGCC TTTTACTTCACTGAG TERM 2742 2885477 - 2885462 - f 79 -10.4 -3.58905 | opp_overlap 2885462 ACGTTCTACAGATAA GGCCTC ACAT GAGGCC TTTTACTTCACTGAG TERM 2743 2885641 - 2885663 + G 79 -7.8 -4.4891 | GCAAGGTATATTTCC TTGGTTCAGT GCC AATGAACCAA TTTTATGGTGGTCAC aat 2885498 - 2886202 + | leucyl/phenylalanyl-tRNA--protein transferase Patl_2372 2886202 - 2886897 + | arginyl-tRNA-protein transferase Patl_2373 2886978 - 2887196 + | translation initiation factor IF-1 TERM 2744 2887245 - 2887209 - T 100 -15.4 -4.44819 | opp_overlap 2887214, overlap 2887214 TAGAATACAGTAAAA GAAAAGGCCCAATGTT GCTAA AACATTGGGCCTTTTT CTATGTCTGTAATTT TERM 2745 2887240 - 2887214 - T 100 -15.3 -5.16132 | opp_overlap 2887214, overlap 2887209 TACAGTAAAAGAAAA GGCCCAATGTT GCTAA AACATTGGGCC TTTTTCTATGTCTGT TERM 2746 2887214 - 2887240 + T 100 -15.3 -5.08178 | opp_overlap 2887214 2887209 TACAGTAAAAGAAAA GGCCCAATGTT GCTAA AACATTGGGCC TTTTTCTATGTCTGT TERM 2747 2887262 - 2887288 + T 91 -13.1 -3.09834 | gap 1, opp_overlap 2887262 TATGTCTGTAATTTA GTGGTGAGGGCC GTTT GGCCCTCAC-AC TTACCTGCTCAGCTC TERM 2748 2887288 - 2887262 - T 90 -13.1 -2.52676 | gap 1, opp_overlap 2887262 TATGTCTGTAATTTA GTGGTGAGGGCC GTTT GGCCCTCAC-AC TTACCTGCTCAGCTC Patl_2374 2889572 - 2887305 - | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 2749 2889332 - 2889322 - G 71 -6.8 -4.09511 | AATACGCGCTGAAAA CCCA AAG TGGG CTGAGTCTCGCGTTC Patl_2375 2889913 - 2889593 - | ATP-dependent Clp protease adaptor protein ClpS Patl_2376 2890079 - 2890333 + | cold-shock DNA-binding domain-containing protein TERM 2750 2890343 - 2890379 + T 95 -14.8 -2.61467 | gap 1, opp_overlap 2890353, overlap 2890353 CAATAAAAGATTGGT CATAAAAAAAGCAGACC TGAA GGTCTGCTTTTTT-ATG CTTAATTAAAAATTT TERM 2751 2890353 - 2890370 + T 100 -11.3 -5.38249 | opp_overlap 2890353, overlap 2890343 TTGGTCATAAAAAAA GCAGACC TGAA GGTCTGC TTTTTTATGCTTAAT TERM 2752 2890370 - 2890353 - T 100 -11.3 -5.60993 | opp_overlap 2890353 2890343 TTGGTCATAAAAAAA GCAGACC TGAA GGTCTGC TTTTTTATGCTTAAT Patl_2377 2892626 - 2890395 - | isocitrate dehydrogenase, NADP-dependent TERM 2753 2892896 - 2892910 + G 80 -7.2 -4.7254 | AAACACCCGCCAGCC GTACAA AAA TTGTAC TTTTTAATAAACCCT Patl_2378 2892853 - 2893431 + | pseudouridine synthase, Rsu TERM 2754 2894267 - 2894252 - g 70 -9 -3.39936 | ATCGAAACGCCAGAA GGCCAA GAAA TTGGCC AGCATCAGGGGCTGA Patl_2379 2893484 - 2894674 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Patl_2380 2894674 - 2895333 + | hypothetical protein Patl_2381 2895347 - 2896714 + | adenylosuccinate lyase TERM 2755 2896729 - 2896748 + F 91 -12.2 -3.95449 | opp_overlap 2896731 AGATGCAGATTATTA GAGGGGAA ATCA TTCCCCTC TTTCGTGTCTTATCG TERM 2756 2897602 - 2897625 + G 71 -3.9 -4.77157 | gap 1 CACTTAAGGCGCAAG CGTTGGTCGA CTTAC TCGAC-GACG TTTTTAGTCAATTCG Patl_2382 2896848 - 2898071 + | adenylate/guanylate cyclase Patl_2383 2898138 - 2899307 + | cupin 4 TERM 2757 2899481 - 2899515 + T 100 -9.4 -5.56372 | overlap 2899482 CTTGCAAGTCGCTTA TGTCCTCAATTAAATC GTC GATTTCATTGAGGGCC TTTTTCTTTTGCTTT TERM 2758 2899482 - 2899514 + T 100 -12.9 -3.90163 | overlap 2899481 TTGCAAGTCGCTTAT GTCCTCAATTAAATC GTC GATTTCATTGAGGGC CTTTTTCTTTTGCTT Patl_2384 2900300 - 2899458 - | hypothetical protein TERM 2759 2899653 - 2899640 - G 79 -8.1 -4.3739 | overlap 2899650 2899651 CAGGGTGGGACAAAA GCGCT AAAA AGCGC GACGTAAAGTCTTCT TERM 2760 2899866 - 2899880 + g 74 -5.6 -4.66609 | opp_overlap 2899867, overlap 2899867 2899876 TAATCGTTCGTCAAA TGTGCG ATC CGCGCG TTTTTCAATGCGCTC Patl_2385 2901224 - 2900406 - | response regulator receiver protein Patl_2386 2902296 - 2901214 - | signal transduction histidine kinase, LytS TERM 2761 2901698 - 2901728 + g 72 -3.2 -4.95302 | opp_overlap 2901697 2901698 2901699, overlap 2901699 GAATAGCGCAAAAAG TCGCTGAGGCGA GTTACCA TAGACTCAGCGG TTTTGTTGTCTTTCA Patl_2387 2902894 - 2902433 - | hypothetical protein TERM 2762 2902818 - 2902804 - G 87 -10 -4.21744 | overlap 2902799 ACGTAACAAAGTAAA TTGCCG GCA CGGCAA TCGCGTGAATTAAGA Patl_2388 2903613 - 2902987 - | type IV pilus assembly PilZ TERM 2763 2903710 - 2903692 - H 80 -6.1 -4.77036 | opp_overlap 2903692 CTGTAGTATCAAAAA CAAAGTA AACTG TACTTTG TCCATTTAACGTAAA TERM 2764 2904983 - 2904959 - g 70 -4.9 -4.41348 | overlap 2904960 GTCGCTTTAAACAAA CCGTCACAGCC TCA AGCTTTGACGC CTGGACCAAGTTCTA Patl_2389 2903830 - 2905680 + | peptidase M61 Patl_2390 2905949 - 2906989 + | adenosine deaminase TERM 2765 2907139 - 2907149 + F 73 -5.4 -4.59414 | ACGTTTATCAATGGT TGTG ATA CACA TTTTGATTGTTATCC Patl_2391 2907223 - 2908224 + | zinc-binding alcohol dehydrogenase TERM 2766 2908275 - 2908243 - T 93 -14.2 -2.63596 | opp_overlap 2908218 TTTGATGCTATAGCA TCGCGCCCTTAGGC TATCT GCCCAAAGGCGCAA CGTGAATCCCTTCGA Patl_2392 2911435 - 2908298 - | CzcA family heavy metal efflux protein TERM 2767 2909518 - 2909530 + g 72 -5.5 -4.48741 | CGTCATCCAGAGCGT GGCGA ATA TCGTC TTTTATCATGCCTTC Patl_2393 2913009 - 2911432 - | RND family efflux transporter MFP subunit Patl_2394 2914469 - 2913006 - | outer membrane efflux protein TERM 2768 2914259 - 2914277 + g 81 -5.2 -5.10461 | CACTGGCCAGCCCTT GAGCACGC AAC GCGTATTC TTTTTGTTGGCTACC Patl_2395 2915178 - 2914684 - | hypothetical protein Patl_2396 2916571 - 2915504 - | sodium/hydrogen exchanger TERM 2769 2916633 - 2916653 + H 73 -6.9 -4.21194 | AGGCCAAAGGTTCCC GTTTGACAA GCT TTGTCACAC TTTTGAGTAGTCGCA TERM 2770 2916742 - 2916756 + H 74 -5 -4.71828 | opp_overlap 2916742 TGTGGTGTAAATCGA CAAGGT TGC ATCTTG TTTTGTTGGTAGGCT TERM 2771 2917165 - 2917149 - H 77 -8 -4.30161 | overlap 2917144 TTACAGAAAACTAAA CGTCTG AAAGA CAGACG ATTGCGGATTGCGGA Patl_2397 2917252 - 2917518 + | hypothetical protein TERM 2772 2918086 - 2918075 - g 85 -5.8 -5.31855 | CATGAATAACAAAAA TGGC TTAA GCCA GCTGCAAGAGTCCAC TERM 2773 2918443 - 2918455 + G 78 -4.8 -5.06414 | overlap 2918439 2918438 TCATCGCATTGTCTC GCAC CGAGA GTGC TTTTTCTTGGGGGGG Patl_2398 2918061 - 2918672 + | hypothetical protein Patl_2399 2919714 - 2918743 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Patl_2400 2919822 - 2921900 + | NADH:flavin oxidoreductase/NADH oxidase TERM 2774 2921941 - 2921974 + T 86 -8.2 -4.91977 | opp_overlap 2921946, overlap 2921946 TAGAAATGGCAATAA AAAAACCGCTAAGG GATGAG CCATAGCGGTTTTG TTTTATCTTTTAGTA TERM 2775 2921969 - 2921946 - T 100 -8.1 -5.80364 | opp_overlap 2921946 2921941 ATGGCAATAAAAAAA CCGCTAAGG GATGAG CCATAGCGG TTTTGTTTTATCTTT TERM 2776 2921946 - 2921969 + T 91 -8.1 -5.2894 | opp_overlap 2921946, overlap 2921941 ATGGCAATAAAAAAA CCGCTAAGG GATGAG CCATAGCGG TTTTGTTTTATCTTT Patl_2401 2923004 - 2922027 - | hypothetical protein TERM 2777 2924341 - 2924330 - g 87 -7.2 -5.252 | GAGTCTGAGAAAAAA GGCC TACG GGCC ACATTTAACAGCCAG TERM 2778 2924840 - 2924860 + G 71 -6.8 -4.13014 | opp_overlap 2924841, overlap 2924841 GGTTTTACGTCTGAA ATCGACGC CCTAC GCGTCGAG TTTTCCGCCTATCGC TERM 2779 2924841 - 2924859 + G 73 -10.3 -3.07487 | opp_overlap 2924841, overlap 2924840 GTTTTACGTCTGAAA TCGACGC CCTAC GCGTCGA GTTTTCCGCCTATCG TERM 2780 2924859 - 2924841 - g 79 -10.3 -3.55444 | opp_overlap 2924841 2924840 GTTTTACGTCTGAAA TCGACGC CCTAC GCGTCGA GTTTTCCGCCTATCG Patl_2402 2923229 - 2925403 + | TonB-dependent receptor, plug TERM 2781 2925527 - 2925544 + G 76 -4.1 -4.98857 | opp_overlap 2925511, overlap 2925529 GAGTACACCTTATAC TGGCGTT AGTC AGCGCTA TTTTTATCGTTAACT TERM 2782 2925712 - 2925724 + G 100 -7.7 -5.75342 | opp_overlap 2925707 GTCTATCAAACGACT CGATC ACC GATCG TTTTTTTTGAACAAG Patl_2403 2925493 - 2926674 + | PepSY-associated TM helix Patl_2404 2926936 - 2927400 + | general stress protein TERM 2783 2927501 - 2927520 + F 100 -10 -5.37043 | CGTATTCCTTTATGA GCCAGCAT CACA GTGCTGGC TTTTTTATATGCCCT Patl_2405 2927780 - 2929111 + | RND family efflux transporter MFP subunit Patl_2406 2929306 - 2930049 + | ABC transporter related Patl_2407 2930059 - 2931375 + | hypothetical protein Patl_2408 2931383 - 2932636 + | hypothetical protein TERM 2784 2932812 - 2932859 + F 100 -14.4 -3.83502 | gap 2, opp_overlap 2932812 2932817 2932823 2932825, overlap 2932817 TTGATATCGGCAAGA CCTAAGGCAAATAG-CGCC-CC ATTGCG GGAGGCGACTATTTGCCTTTGG TTTAGTATCCCGCTC TERM 2785 2932859 - 2932812 - f 100 -15.8 -3.05343 | gap 1, opp_overlap 2932812 2932817, overlap 2932817 2932823 2932825 TTGATATCGGCAAGA CCTAAGGCAAATAG-CGCCCC ATTGCGG GAGGCGACTATTTGCCTTTGG TTTAGTATCCCGCTC TERM 2786 2932854 - 2932817 - f 91 -12.9 -3.18728 | gap 1, opp_overlap 2932817 2932812, overlap 2932812 2932823 2932825 ATCGGCAAGACCTAA GGCAAATAG-CGCCCC ATTGCGG GAGGCGACTATTTGCC TTTGGTTTAGTATCC TERM 2787 2932817 - 2932854 + F 90 -11.5 -4.12738 | gap 2, opp_overlap 2932812 2932817 2932823 2932825, overlap 2932812 ATCGGCAAGACCTAA GGCAAATAG-CGCC-CC ATTGCG GGAGGCGACTATTTGCC TTTGGTTTAGTATCC Patl_2409 2932887 - 2933438 + | hypothetical protein TERM 2788 2933515 - 2933499 - f 71 -3.7 -5.00616 | opp_overlap 2933498, overlap 2933500 CCCCTTGGCAAAAAA TTAATGG ACC CCATTAG ATTGAATCAGCTACT Patl_2410 2933657 - 2934028 + | glutaredoxin Patl_2411 2934165 - 2934608 + | hypothetical protein Patl_2412 2935541 - 2934804 - | hypothetical protein TERM 2789 2934898 - 2934908 + g 72 -3.2 -5.07652 | opp_overlap 2934892, overlap 2934892 ATGCTAAATTGCCCT TGTG AGG CACG TTTTATTTTACCAAG Patl_2413 2935745 - 2935548 - | hypothetical protein TERM 2790 2935797 - 2935770 - R 75 -2.7 -5.24551 | opp_overlap 2935772 2935795 TGAAATTAATAAAAA TAGCGTGCGAA ATGGCG TTCGTACCCTA GCTTATCAAAGCTAA TERM 2791 2935904 - 2935862 - R 100 -9.3 -5.56568 | gap 1, opp_overlap 2935862 ATATGATGAAAAAAA GCAAGTA-GGACGCCGCTAA ACAT TTAACGACGCACGTACTTGC TTCTGGCTTGCTTGT Patl_2414 2937230 - 2935998 - | putative lipoprotein Patl_2415 2938278 - 2937424 - | nitrate ABC transporter, ATPase subunits C and D Patl_2416 2939350 - 2938361 - | binding-protein-dependent transport systems inner membrane component TERM 2792 2939369 - 2939391 + r 89 -12 -3.66874 | ATGTTCCTCTAAGCC GAGGTTGAGC CAT GCCCAACCTC TTTGGCTGCGATTAA Patl_2417 2940803 - 2939403 - | putative nitrate transport protein TERM 2793 2940840 - 2940880 + r 73 -8.3 -3.62859 | opp_overlap 2940844, overlap 2940843 AAAATTTTCCAAAAA AAAACCCACAACCATCCAA AAT TTGGATGCTTGTGGGCTAC TTTGCCGGTTGTAGT TERM 2794 2940843 - 2940877 + r 95 -14.4 -2.92935 | opp_overlap 2940844, overlap 2940840 ATTTTCCAAAAAAAA ACCCACAACCATCCAA AAT TTGGATGCTTGTGGGC TACTTTGCCGGTTGT TERM 2795 2940876 - 2940844 - R 100 -17.9 -6.06723 | opp_overlap 2940843 2940840 TTTTCCAAAAAAAAA CCCACAACCATCCAA AAT TTGGATGCTTGTGGG CTACTTTGCCGGTTG Patl_2418 2943002 - 2941290 - | serine/threonine protein kinase TERM 2796 2942878 - 2942890 + g 72 -10.5 -2.7644 | opp_overlap 2942858 2942869, overlap 2942877 ACACCATCGGCGATA GCGGC CAC GCCGC CTTTAGAGGTTAAAT Patl_2419 2944509 - 2943043 - | major facilitator transporter TERM 2797 2944581 - 2944545 - R 100 -8 -6.11644 | gap 1, opp_overlap 2944544 TTACTCAAAAAAAAA CCCGCAAAGACT-CCAG GACA CGGAAAGTCATTGCGGG CTACATTGCCTTACT TERM 2798 2945051 - 2945038 - R 78 -3.8 -5.1861 | opp_overlap 2945038 CCGACTATGAAAAAA CGCA TTCCTT TGCG TTAGATAAGGTTATA Patl_2420 2946078 - 2945062 - | adenosine deaminase TERM 2799 2945540 - 2945520 - G 71 -3.9 -4.7497 | TCGATTTAGCAAAAA CGCGAGCAA ATT TTTCTGGCG GATTACCCAGCTCAG TERM 2800 2946602 - 2946616 + H 77 -8.6 -3.84246 | GGTTTTTGCTTCACG GGGTTA CTT TAACCC TTTCATCATTGGCCC Patl_2421 2946668 - 2947999 + | xanthine/uracil/vitamin C permease TERM 2801 2948068 - 2948093 + T 100 -11.1 -5.66684 | opp_overlap 2948068 CACCCCCATAAAAAA CGCGTAGAGGG CTTG CCTACTACGCG TTTTTTTATGGCTTC TERM 2802 2948093 - 2948068 - T 100 -9.8 -5.252 | gap 1, opp_overlap 2948068 CACCCCCATAAAAAA CGCGTAG-AGG GCTTG CCTACTACGCG TTTTTTTATGGCTTC Patl_2422 2949059 - 2948154 - | polysaccharide deacetylase Patl_2423 2949717 - 2949073 - | TetR family transcriptional regulator TERM 2803 2949217 - 2949203 - G 72 -2.8 -4.91511 | ATCTGAGCAGAAAAA TCAGCA TAG TGTTGA CTGCTCGCCCAAATA TERM 2804 2949932 - 2949966 + H 79 -9.5 -3.74519 | gap 1, opp_overlap 2949941, overlap 2949935 2949941 GAATCGAAAAGTATT TAGCAAAAACCTGACC AACT GGTCTGGTTTTTG-TA TTTAATCAAGCTATT TERM 2805 2949935 - 2949964 + H 95 -13.7 -3.45324 | opp_overlap 2949941, overlap 2949932 2949941 TCGAAAAGTATTTAG CAAAAACCTGACC AACT GGTCTGGTTTTTG TATTTAATCAAGCTA TERM 2806 2949941 - 2949958 + H 89 -6.9 -5.22289 | opp_overlap 2949941, overlap 2949935 2949932 AGTATTTAGCAAAAA CCTGACC AACT GGTCTGG TTTTTGTATTTAATC TERM 2807 2949958 - 2949941 - H 81 -6.9 -4.75372 | opp_overlap 2949941 2949935 2949932 AGTATTTAGCAAAAA CCTGACC AACT GGTCTGG TTTTTGTATTTAATC Patl_2424 2950031 - 2951473 + | molybdopterin dehydrogenase, FAD-binding TERM 2808 2952029 - 2952041 + G 83 -9.1 -4.36914 | AACAGAGTAATTTTG TGCGC CCA GCGCA TTTTATGCAACAAGG TERM 2809 2953752 - 2953764 + G 74 -6.9 -4.22009 | opp_overlap 2953747, overlap 2953749 TCACTCTAAAGCGGT GGGTG AAC CGCCC TTTATGTTGGCTAAT Patl_2425 2951572 - 2953926 + | xanthine dehydrogenase Patl_2426 2953928 - 2954857 + | hypothetical protein TERM 2810 2954893 - 2954877 - f 83 -10.9 -3.74184 | AACTGAATTGAATAA CCTCACT GCG AGTGAGG CTGAAACGTTTTTTG Patl_2427 2954944 - 2955363 + | hypothetical protein Patl_2428 2955356 - 2955688 + | transthyretin Patl_2429 2955705 - 2957000 + | guanine deaminase TERM 2811 2958167 - 2958145 - g 72 -6.3 -4.22346 | gap 1, opp_overlap 2958144 CAAATTCAGGCAAAA GCACCGCTGA TATA CCAGCG-TGC CGTTGTCAGTAAAGA Patl_2430 2957041 - 2958255 + | hypothetical protein TERM 2812 2958290 - 2958337 + T 91 -13 -3.05816 | opp_overlap 2958302, overlap 2958302 TTTCACAAACGGTAT ACGTAATAAAAATGGCCTAAAA TGTC TTTTAGGCCATTTTTATATCGC TTACATCGCAAATAC TERM 2813 2958325 - 2958302 - T 100 -12.6 -5.12068 | opp_overlap 2958290 2958302 TATACGTAATAAAAA TGGCCTAAAA TGTC TTTTAGGCCA TTTTTATATCGCTTA TERM 2814 2958302 - 2958325 + T 100 -12.6 -5.00642 | opp_overlap 2958302, overlap 2958290 TATACGTAATAAAAA TGGCCTAAAA TGTC TTTTAGGCCA TTTTTATATCGCTTA TERM 2815 2958487 - 2958505 + T 75 -5.9 -4.72333 | GCGCTTATTCGACGC CGCCCAC ACCAA GTTGGCG TTTTTGCATATAGTT Patl_2431 2959096 - 2958476 - | negative transcriptional regulator TERM 2816 2959288 - 2959303 + r 86 -9 -4.31412 | opp_overlap 2959288 GTAAAAACGAAAAAA CGCTCT ATAA AGAGCG TTTTGATGACTATTT TERM 2817 2959303 - 2959288 - R 100 -9 -5.54079 | opp_overlap 2959288 GTAAAAACGAAAAAA CGCTCT ATAA AGAGCG TTTTGATGACTATTT TERM 2818 2959381 - 2959347 - R 88 -11.4 -3.59979 | opp_overlap 2959348, overlap 2959348 2959350 CGCTGTCATGTTAAA CCATGGATGCTGCACG TTC CGCCCAGCACCCATGT TTACACCGCACTGTT TERM 2819 2959348 - 2959380 + r 79 -10.5 -3.53563 | opp_overlap 2959348 2959347 2959350 GCTGTCATGTTAAAC CATGGATGCTGCACG TTC CGCCCAGCACCCATG TTTACACCGCACTGT TERM 2820 2959380 - 2959348 - R 95 -14.9 -2.75844 | opp_overlap 2959348, overlap 2959347 2959350 GCTGTCATGTTAAAC CATGGATGCTGCACG TTC CGCCCAGCACCCATG TTTACACCGCACTGT TERM 2821 2959378 - 2959350 - R 82 -11.7 -2.92613 | opp_overlap 2959348, overlap 2959348 2959347 TGTCATGTTAAACCA TGGATGCTGCACG TTC CGCCCAGCACCCA TGTTTACACCGCACT Patl_2432 2959798 - 2959421 - | glyoxalase/bleomycin resistance protein/dioxygenase Patl_2433 2961023 - 2960019 - | hypothetical protein TERM 2822 2960771 - 2960794 + g 72 -8.2 -3.65902 | opp_overlap 2960782 ACTCAGACAAGTCCT TGGCGATATT AGGC AACATCGCCA TTTCAGTGCGATAAG Patl_2434 2962302 - 2961025 - | hypothetical protein TERM 2823 2961711 - 2961688 - G 73 -2.5 -5.18643 | gap 1 GCAATCAAAATAAAA TTCAG-GTTG CGGAT CAACACCGAA TTCATGTAGCCCAGC TERM 2824 2961909 - 2961919 + g 74 -6.8 -4.30416 | opp_overlap 2961904 TAAGCGAAAGCAACT CAGC ATC GCTG TTTTGGGTTAGTAAT TERM 2825 2961990 - 2962032 + g 71 -3.4 -4.78107 | gap 1, opp_overlap 2961989 CCTCTTCTATCGAAG GGCGACTGATCATCCCCCT TTGAGC ACGGGGATAA-CGCTCGCC TTTTTGCTCATAATA TERM 2826 2962299 - 2962311 + g 70 -4.9 -4.38273 | TGTGAGATGCAACCG TCATA TCA TATGA TTTCTTATGGTCTAT Patl_2435 2963248 - 2962400 - | 3-beta hydroxysteroid dehydrogenase/isomerase Patl_2436 2963677 - 2963432 - | hypothetical protein TERM 2827 2963519 - 2963508 - G 70 -2.2 -4.91511 | ACCTGAGTATAAAAA GACA GTTT TGCC ACACGCCAATAAAGC Patl_2437 2964276 - 2964028 - | hypothetical protein Patl_2438 2965815 - 2964439 - | DEAD/DEAH box helicase-like Patl_2439 2966416 - 2965991 - | hypothetical protein Patl_2440 2966748 - 2967575 + | hypothetical protein Patl_2441 2967634 - 2968848 + | hypothetical protein TERM 2828 2970279 - 2970265 - g 72 -5.7 -4.42806 | CCAGCGCGAAAGAAA CTGAG GTAAG CTCAG GAGAATTTGATTTAA TERM 2829 2970494 - 2970472 - g 95 -2.7 -6.02546 | CCAAATCAAAAAAAA CGCTTAATC CCTGT GACCAAACG ACCAGTTAGCGAAAG Patl_2442 2968845 - 2970503 + | hypothetical protein TERM 2830 2970610 - 2970630 + G 70 -9.7 -2.94144 | overlap 2970607 TATGGTCGCCTTGAT GAGCTGCTT GAT AAGCAGCAC TACTTTGGCTAAAGA TERM 2831 2970646 - 2970679 + G 74 -3.8 -5.04987 | opp_overlap 2970646 2970644 TACTTTGGCTAAAGA GGCACCGTTGGT TTCCATACCT ACCCACGATGCC TTTTTTACCAGTATT Patl_2443 2970557 - 2971168 + | secreted protein TERM 2832 2971684 - 2971706 + F 77 -10.6 -2.85896 | overlap 2971677 2971681 2971686 ATTTATCAGGTGTGG CAGCGCATCA TTT TTATGCGCTG TAATTGATTAATGGC Patl_2444 2971923 - 2972333 + | hypothetical protein Patl_2445 2974244 - 2972541 - | hypothetical protein TERM 2833 2972837 - 2972872 + g 72 -6 -4.41494 | opp_overlap 2972847, overlap 2972847 GCCACAAAGCCCATT GCTCAGACAACTCGCC TGTT GGCGCGTTGTAGAAGC TTTTGCTTAAACCTG TERM 2834 2973754 - 2973770 + g 76 -7.9 -4.20531 | opp_overlap 2973754, overlap 2973757 CCGCCACGACAGTAA GGTGTGG GGC CCCCACC TTTTAACTGCATCTC TERM 2835 2973848 - 2973866 + g 75 -9.6 -3.65201 | opp_overlap 2973847 CATCGCCGTAACCAT TGCCCGTT CCA AATGGGCA TTGTTGAACATATTC TERM 2836 2974649 - 2974626 - R 93 -8.9 -5.252 | opp_overlap 2974625 2974628 2974641 TAGGCCTATAAAAAA GAGCCGTTG TTAGAG CAACAGCTC CTGTCGTTAAATACT Patl_2446 2975146 - 2974682 - | hypothetical protein TERM 2837 2975691 - 2975734 + r 89 -9.1 -4.82756 | gap 2, opp_overlap 2975705 GTGGTGTCATAAATG CTTGG-GCTAAAAA-ACGACG ATGT CGGCGTGTTTTTGGCTCCAAG TTTTGTTCATTATAT TERM 2838 2975715 - 2975705 - R 84 -6.8 -5.00616 | opp_overlap 2975691 GCTTGGGCTAAAAAA CGAC GAT GTCG GCGTGTTTTTGGCTC Patl_2447 2976064 - 2975744 - | hypothetical protein TERM 2839 2976620 - 2976640 + r 73 -10.5 -2.90714 | opp_overlap 2976620 2976623, overlap 2976623 GCACGTCCTTACGAA CGAGGGATT TTA AATCCCTTG TGTCTACCAATTTCA TERM 2840 2976623 - 2976637 + r 72 -8.6 -3.5947 | opp_overlap 2976620 2976623, overlap 2976620 CGTCCTTACGAACGA GGGATT TTA AATCCC TTGTGTCTACCAATT TERM 2841 2976898 - 2976914 + r 70 -9.5 -2.62983 | overlap 2976901 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCACTGAG Patl_2448 2977704 - 2977132 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 2842 2977527 - 2977517 - G 72 -3.2 -5.00884 | ACTGGGTCTAAAAAA GCAC CAA ATGC GGTAGACTGTTGCAA uvrC 2979600 - 2977774 - | excinuclease ABC subunit C TERM 2843 2979172 - 2979153 - G 71 -3.6 -4.87626 | gap 1, opp_overlap 2979139 GGCGAATAGGAAAAA TTCGCTGCA TTG TGC-GCAAA CTTTCGCGCACGGCC Patl_2450 2980248 - 2979604 - | two component LuxR family transcriptional regulator TERM 2844 2981774 - 2981796 + H 100 -9.1 -5.98675 | opp_overlap 2981774 AGCAAAAACAAAAAA GCCCCAACG AACAA CGTTGAGGC TTTTTTGTTTTTATG TERM 2845 2981796 - 2981774 - H 100 -11.3 -5.95286 | opp_overlap 2981774 AGCAAAAACAAAAAA GCCCCAACG AACAA CGTTGAGGC TTTTTTGTTTTTATG Patl_2451 2982284 - 2982952 + | hypothetical protein TERM 2846 2982967 - 2982998 + F 91 -11.7 -3.9712 | opp_overlap 2982973, overlap 2982973 ATCGTTAATGTGTTG CAAAAACACCCCG CTTAGT CGGGGTGTTTTTA TTTGTACTAAACTCA TERM 2847 2982973 - 2982992 + F 100 -10.7 -5.40464 | opp_overlap 2982973, overlap 2982967 AATGTGTTGCAAAAA CACCCCG CTTAGT CGGGGTG TTTTTATTTGTACTA TERM 2848 2982992 - 2982973 - f 91 -10.7 -4.57341 | opp_overlap 2982967 2982973 AATGTGTTGCAAAAA CACCCCG CTTAGT CGGGGTG TTTTTATTTGTACTA Patl_2452 2983028 - 2983417 + | DsrE-like protein Patl_2453 2983420 - 2983776 + | DsrE-like protein Patl_2454 2983777 - 2984091 + | DsrH family protein Patl_2455 2984169 - 2984513 + | DsrC-like protein TERM 2849 2984570 - 2984540 - T 100 -18.4 -5.4588 | opp_overlap 2984540 TAAAATCATAAAAAA GCGCGGCCACTT ATCTACA AAGTGGCCGCGC TTTTTTGTATCAGTA TERM 2850 2984540 - 2984570 + T 100 -18.4 -5.38047 | opp_overlap 2984540 TAAAATCATAAAAAA GCGCGGCCACTT ATCTACA AAGTGGCCGCGC TTTTTTGTATCAGTA Patl_2456 2985903 - 2984605 - | seryl-tRNA synthetase TERM 2851 2985840 - 2985852 + g 72 -4.8 -4.56775 | opp_overlap 2985828 CATCAAGGGTGTAAC CTCG TTTTT CGAG TTTTTGCGCCGCAAT Patl_2457 2986297 - 2985914 - | CrcB protein TERM 2852 2986254 - 2986232 - G 86 -2.7 -5.64421 | gap 1, opp_overlap 2986249, overlap 2986241 ACTGGAAAGAAAAAA GCGTAAACAG GCAC CTGTTG-CGC CCCCTAGCGCAATAT Patl_2458 2987635 - 2986298 - | recombination factor protein RarA TERM 2853 2987305 - 2987327 + g 100 -10.6 -5.19998 | opp_overlap 2987304 CAACAAATAAAATGG TGCGCTTGGC CTG GTTAAGCGCA TTTTGTTTTGCTTGT Patl_2459 2988276 - 2987635 - | outer membrane lipoprotein carrier protein LolA Patl_2460 2990814 - 2988301 - | cell divisionFtsK/SpoIIIE TERM 2854 2989465 - 2989480 + g 80 -5.4 -5.06414 | gap 1 AATCACTTCGCTCAA GCGC-AC CAT GTCGCGC TTTTTATTGGGCAAC Patl_2461 2991424 - 2990939 - | leucine-responsive transcriptional regulator Patl_2462 2991575 - 2992705 + | alanine dehydrogenase TERM 2855 2992728 - 2992757 + T 90 -13.1 -2.66451 | opp_overlap 2992728 2992735, overlap 2992735 TGGATGTAGATTAAA TAAAAAAGGCACT CTCG AGTGCCTTTTTTG TGCGTTTAAATGCGT TERM 2856 2992757 - 2992728 - T 86 -10.9 -3.84825 | opp_overlap 2992728 2992735, overlap 2992735 TGGATGTAGATTAAA TAAAAAAGGCACT CTCG AGTGCCTTTTTTG TGCGTTTAAATGCGT TERM 2857 2992750 - 2992735 - T 100 -9 -5.69793 | opp_overlap 2992735 2992728, overlap 2992728 AGATTAAATAAAAAA GGCACT CTCG AGTGCC TTTTTTGTGCGTTTA TERM 2858 2992735 - 2992750 + T 93 -9 -5.33866 | opp_overlap 2992728 2992735, overlap 2992728 AGATTAAATAAAAAA GGCACT CTCG AGTGCC TTTTTTGTGCGTTTA Patl_2463 2993508 - 2992813 - | orotidine 5'-phosphate decarboxylase Patl_2464 2994684 - 2993515 - | hypothetical protein TERM 2859 2994053 - 2994063 + g 80 -6.8 -4.61527 | ACGGTATTTTGGTCA GCCA TAA TGGC TTTTTGCAAGGTTTT TERM 2860 2994313 - 2994299 - G 72 -5.6 -4.39828 | overlap 2994288 AATAGCTGCAGAAAA GCGTTC TCA GCACGC TCCAAAAAGCCTGCA TERM 2861 2995134 - 2995113 - R 100 -13.7 -5.09204 | opp_overlap 2995113 ACACTCTAACAAAAA CGGCACCCC AATT GGAGTGCCG TTTTAATGATTTAGA TERM 2862 2995113 - 2995134 + r 93 -11.5 -4.39386 | opp_overlap 2995113 ACACTCTAACAAAAA CGGCACCCC AATT GGAGTGCCG TTTTAATGATTTAGA Patl_2465 2995446 - 2995156 - | integration host factor, beta subunit rpsA 2997190 - 2995517 - | 30S ribosomal protein S1 TERM 2863 2997338 - 2997300 - R 79 -10.5 -3.56558 | TTACAAGTGATATAA TGCTAGCTCTTAAATCA GATTT CGATTTTAGAACTAGCA AATTCAGTAATCTTA Patl_2467 2997991 - 2997314 - | cytidylate kinase TERM 2864 2998116 - 2998069 - R 100 -15 -3.38178 | opp_overlap 2998071 2998073, overlap 2998070 2998087 TAAGCAAGTTTACAA TCTTGTGACCGCTGTAAACACG AGCT CATGTTCACAGCGGTCACTAAT TTAGGCGCTTATTTG TERM 2865 2998115 - 2998070 - R 100 -18.5 -2.62425 | opp_overlap 2998071 2998073, overlap 2998069 2998087 AAGCAAGTTTACAAT CTTGTGACCGCTGTAAACACG AGCT CATGTTCACAGCGGTCACTAA TTTAGGCGCTTATTT TERM 2866 2998071 - 2998115 + r 95 -13.8 -3.59649 | gap 1, opp_overlap 2998070 2998069 2998087, overlap 2998073 AGCAAGTTTACAATC TT-GTGACCGCTGTAAACACG AGCT CATGTTCACAGCGGTCACTAA TTTAGGCGCTTATTT TERM 2867 2998073 - 2998112 + r 100 -18 -2.9162 | opp_overlap 2998070 2998069 2998087, overlap 2998071 CAAGTTTACAATCTT GTGACCGCTGTAAACACG AGCT CATGTTCACAGCGGTCAC TAATTTAGGCGCTTA Patl_2468 2999406 - 2998117 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2868 2999039 - 2999051 + g 77 -10.5 -3.34895 | GGGCGCTCTTCCATC CGGGG TTC CCCCG TTAATTCAAACTCAC Patl_2469 3000493 - 2999408 - | phosphoserine aminotransferase TERM 2869 3000515 - 3000533 + r 86 -10.2 -4.09243 | opp_overlap 3000516, overlap 3000516 3000518 ATTTCCGATACAAAA AGAGCGGC TAA GCCGCTCG TTTTAAAAAACTATA TERM 2870 3000516 - 3000532 + r 93 -13.7 -3.05224 | opp_overlap 3000516, overlap 3000515 3000518 TTTCCGATACAAAAA GAGCGGC TAA GCCGCTC GTTTTAAAAAACTAT TERM 2871 3000532 - 3000516 - R 100 -13.7 -4.96848 | opp_overlap 3000515 3000516 3000518 TTTCCGATACAAAAA GAGCGGC TAA GCCGCTC GTTTTAAAAAACTAT TERM 2872 3000518 - 3000530 + r 75 -10.5 -3.08211 | opp_overlap 3000516, overlap 3000516 3000515 TCCGATACAAAAAGA GCGGC TAA GCCGC TCGTTTTAAAAAACT Patl_2470 3003286 - 3000593 - | DNA gyrase, A subunit TERM 2873 3002835 - 3002862 + g 100 -9.2 -4.97405 | gap 1 GGGATGAATTCGGTA CCGTCGTAATTCG GAA CGAAGT-CGACGG TTTCTTTTTCTAAAT TERM 2874 3003012 - 3003002 - G 76 -4.6 -4.94058 | GTAACGTAAAGAAAA CGGC TGA GCCA TACGTACGATGGTAT TERM 2875 3003160 - 3003145 - G 80 -6.8 -4.70169 | gap 1, opp_overlap 3003158 TCATAGCGAACAAAA CCCG-GC GAT GCACGGG CTTCAAGCCATCTCT Patl_2471 3003525 - 3004286 + | ubiquinone biosynthesis O-methyltransferase TERM 2876 3004638 - 3004648 + G 80 -6.8 -4.69656 | opp_overlap 3004626 3004633 CAATAAACCACAATG GCTC ACC GAGC TTTTGTTACCTCATT Patl_2472 3004288 - 3004944 + | phosphoglycolate phosphatase TERM 2877 3005263 - 3005293 + F 74 -6.2 -4.38154 | opp_overlap 3005259 3005271 3005272, overlap 3005265 3005267 3005271 GTCAAGCATAATTTC CACAGAAATGGTGA AAT TCACCGTTTCTATA TTTTGTAAAAACTAT TERM 2878 3005265 - 3005291 + F 77 -8.8 -3.79687 | opp_overlap 3005259 3005271 3005272, overlap 3005263 3005267 3005271 CAAGCATAATTTCCA CAGAAATGGTGA AAT TCACCGTTTCTA TATTTTGTAAAAACT TERM 2879 3005267 - 3005289 + F 88 -11.4 -3.48115 | opp_overlap 3005259 3005271 3005272, overlap 3005265 3005263 3005271 AGCATAATTTCCACA GAAATGGTGA AAT TCACCGTTTC TATATTTTGTAAAAA TERM 2880 3005271 - 3005285 + F 74 -6.4 -4.36366 | opp_overlap 3005271 3005272, overlap 3005267 3005265 3005263 TAATTTCCACAGAAA TGGTGA AAT TCACCG TTTCTATATTTTGTA Patl_2473 3005327 - 3007642 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 3007708 - 3008838 + | ribonucleotide-diphosphate reductase subunit beta TERM 2881 3008879 - 3008850 - g 72 -2.7 -5.02476 | overlap 3008867 ATAGTGTGCAAAAAA GTCACGGTTGTTG AACA CGACGACCCCGAC GCCCCCTGTGAGCAT Patl_2475 3008838 - 3009110 + | ferredoxin TERM 2882 3009189 - 3009206 + T 72 -8.4 -3.53722 | opp_overlap 3009189 TTAAAATCCAAAAAA GCCAGC AAAATA GCTGGC TTATATGAGTCTCAC TERM 2883 3009206 - 3009189 - T 93 -8.4 -5.2696 | opp_overlap 3009189 TTAAAATCCAAAAAA GCCAGC AAAATA GCTGGC TTATATGAGTCTCAC Patl_2476 3010345 - 3009242 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2884 3010407 - 3010379 - R 91 -10.4 -4.56597 | opp_overlap 3010384 3010386, overlap 3010380 3010386 TGGGTTGCCTAAAAA CGAAAAAGCACC CTTGC GGTGCTCTTTCA ATCGATACGGATTAC TERM 2885 3010406 - 3010380 - R 86 -11.7 -3.33744 | opp_overlap 3010384 3010386, overlap 3010379 3010386 GGGTTGCCTAAAAAC GAAAAAGCACC CTTGC GGTGCTCTTTC AATCGATACGGATTA TERM 2886 3010400 - 3010386 - R 90 -7.1 -5.18355 | opp_overlap 3010386 3010384, overlap 3010380 3010379 CCTAAAAACGAAAAA GCACC CTTGC GGTGC TCTTTCAATCGATAC Patl_2477 3011530 - 3010424 - | NlpBDapX lipoprotein Patl_2478 3012421 - 3011540 - | dihydrodipicolinate synthase Patl_2479 3012583 - 3013110 + | glycine cleavage system transcriptional repressor bcp 3013167 - 3013631 + | thioredoxin-dependent thiol peroxidase Patl_2481 3014767 - 3013697 - | hypothetical protein Patl_2482 3015105 - 3016571 + | peptidase M48, Ste24p Patl_2483 3017027 - 3016557 - | redoxin TERM 2887 3016582 - 3016603 + g 79 -9.4 -4.1822 | TTTAATATTTCGATA GCGCTGTG CAAGGA CGCAGCGC TTTGTTCACCTAACA Patl_2484 3017106 - 3017477 + | arsenate reductase Patl_2485 3017474 - 3018070 + | flavodoxin/nitric oxide synthase Patl_2486 3018092 - 3018520 + | hypothetical protein Patl_2487 3019230 - 3018517 - | chromosomal replication initiator, DnaA TERM 2888 3018553 - 3018588 + g 78 -12 -3.08278 | overlap 3018551 3018555 TTTTACAAATGGGAT GGTCAGCTTTCTTTGC TGTT GTAAAGACAGCTGATC TAATTTATCTAATGT TERM 2889 3018555 - 3018586 + g 75 -11 -3.09096 | overlap 3018553 3018551 TTACAAATGGGATGG TCAGCTTTCTTTGC TGTT GTAAAGACAGCTGA TCTAATTTATCTAAT Patl_2488 3020342 - 3019230 - | hypothetical protein TERM 2890 3020711 - 3020700 - g 72 -5.8 -4.40184 | opp_overlap 3020699 3020700 CCAACTAAATATAAA GAGC CGCT GCTC GTTTCAGGCACCGAT Patl_2489 3020529 - 3021566 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 2891 3021686 - 3021663 - g 79 -4.6 -5.15634 | gap 1, opp_overlap 3021663 3021666 TAGCCGAGCAAAAAA TAACGGC-GCA AAT TGTTGCCGTTA TTTCCAACAAAGCCG Patl_2490 3021566 - 3022222 + | phosphoribosylglycinamide formyltransferase Patl_2491 3022236 - 3022907 + | hypothetical protein TERM 2892 3022944 - 3022919 - f 100 -10.5 -5.52079 | opp_overlap 3022923, overlap 3022921 ATAGTAAAATAAAAA TACAGTGACTC ATTT GAGTCACTGTT GCCGTTCAATCATCC TERM 2893 3022942 - 3022921 - f 100 -13.1 -4.37486 | opp_overlap 3022923, overlap 3022919 AGTAAAATAAAAATA CAGTGACTC ATTT GAGTCACTG TTGCCGTTCAATCAT TERM 2894 3022923 - 3022940 + F 73 -9.9 -3.09968 | opp_overlap 3022921 3022919 TAAAATAAAAATACA GTGACTC ATTT GAGTCAC TGTTGCCGTTCAATC fadE 3023111 - 3025576 + | acyl-CoA dehydrogenase TERM 2895 3025640 - 3025613 - T 90 -11.4 -3.95852 | opp_overlap 3025618, overlap 3025618 AGCCCACTAATGAAA CAAAACCGCTTC AATT GAAGCGGTTTTT TTATAGGTGGAATTT TERM 2896 3025635 - 3025618 - T 95 -11.3 -5.00851 | opp_overlap 3025618, overlap 3025613 ACTAATGAAACAAAA CCGCTTC AATT GAAGCGG TTTTTTTATAGGTGG TERM 2897 3025618 - 3025635 + T 100 -11.3 -5.64274 | opp_overlap 3025618 3025613 ACTAATGAAACAAAA CCGCTTC AATT GAAGCGG TTTTTTTATAGGTGG TERM 2898 3025723 - 3025758 + T 74 -9 -3.61517 | opp_overlap 3025727, overlap 3025726 GAATTTCAGGTATAA AAAATCCGCTACCTAG CATG CTAGGTAGCGGAGTAA TTATTAAAACCGACT TERM 2899 3025726 - 3025755 + T 100 -15.1 -2.93073 | opp_overlap 3025727, overlap 3025723 TTTCAGGTATAAAAA ATCCGCTACCTAG CATG CTAGGTAGCGGAG TAATTATTAAAACCG TERM 2900 3025754 - 3025727 - T 100 -18.6 -5.28176 | opp_overlap 3025726 3025723 TTCAGGTATAAAAAA TCCGCTACCTAG CATG CTAGGTAGCGGA GTAATTATTAAAACC TERM 2901 3025763 - 3025795 + T 70 -8.5 -3.31726 | opp_overlap 3025768, overlap 3025768 TAGCGGAGTAATTAT TAAAACCGACTCCGT ATT ACTCAGTCGGTTTTG TATTCTCTACGCGGC TERM 2902 3025790 - 3025768 - T 74 -6.2 -4.36411 | opp_overlap 3025768 3025763 GAGTAATTATTAAAA CCGACTCCGT ATT ACTCAGTCGG TTTTGTATTCTCTAC TERM 2903 3025768 - 3025790 + T 80 -6.2 -4.76963 | opp_overlap 3025768, overlap 3025763 GAGTAATTATTAAAA CCGACTCCGT ATT ACTCAGTCGG TTTTGTATTCTCTAC Patl_2493 3026075 - 3025779 - | integration host factor, alpha subunit pheT 3028468 - 3026081 - | phenylalanyl-tRNA synthetase subunit beta TERM 2904 3026773 - 3026786 + g 72 -5.9 -4.48987 | opp_overlap 3026762, overlap 3026756 CAAACAAGCGAACCC GCGCT TGTT GGCGC TTTTGGTTATAAGAA TERM 2905 3027401 - 3027429 + g 76 -11.8 -2.75268 | overlap 3027400 CTCGTATCGATGTGA TGCGTCAGTATG TAACC CATACTGGCGCG CTTTACCCATAATTG TERM 2906 3028517 - 3028503 - R 70 -2.8 -5.01732 | AACTGCTTTAAAAAA CGAAGA TCG TTTTCG AAAAATGCACGTAAA pheS 3029461 - 3028481 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2907 3029703 - 3029723 + r 95 -14 -3.61517 | opp_overlap 3029703 CCAAACAAAAAAAAA CGGCGAGC ATCCG GCTCGCCG TTCTTCGAAAGAACT TERM 2908 3029723 - 3029703 - R 100 -14 -6.4753 | opp_overlap 3029703 CCAAACAAAAAAAAA CGGCGAGC ATCCG GCTCGCCG TTCTTCGAAAGAACT rplT 3030115 - 3029759 - | 50S ribosomal protein L20 TERM 2909 3030149 - 3030163 + r 73 -10 -2.89881 | opp_overlap 3030146 3030141 3030161 3030162 AACGTAAGGTAACAT GCGTTG AAT CAACGC TGTGTCAGCTACATG Patl_2497 3030328 - 3030131 - | ribosomal protein L35 Patl_2498 3030910 - 3030446 - | translation initiation factor IF-3 Patl_2499 3032925 - 3031009 - | threonyl-tRNA synthetase TERM 2910 3033025 - 3033011 - H 100 -5.7 -6.28401 | opp_overlap 3033011 3033006 TAAAAAATAAAAAAA CACCT CTAAT AGGTG TTTTGTCTGCTGTTC TERM 2911 3033011 - 3033025 + H 73 -5.7 -4.61147 | opp_overlap 3033011, overlap 3033006 TAAAAAATAAAAAAA CACCT CTAAT AGGTG TTTTGTCTGCTGTTC Patl_2500 3033089 - 3033736 + | hypothetical protein Patl_2501 3033865 - 3034608 + | short-chain dehydrogenase/reductase SDR Patl_2502 3034618 - 3035658 + | hypothetical protein Patl_2503 3036410 - 3035655 - | DNA polymerase III subunit epsilon Patl_2504 3038313 - 3036427 - | cyclic nucleotide-binding protein TERM 2912 3037042 - 3037053 + g 79 -2.2 -5.5604 | CTCCCATATTTTTAA TGGT TGAC GCCA TTTTTTGTTAGTTGC TERM 2913 3037842 - 3037852 + g 71 -6.8 -4.14392 | AGATCAGCGGCAATT GCTC GAT GAGC TTTTCCACCTTGACC TERM 2914 3038425 - 3038400 - R 100 -12.7 -4.40963 | opp_overlap 3038400 3038404, overlap 3038404 ATCGTGTAAAAACAA CAAATCCAGCC TGAT AGCTGGATTTG TATAATCAGATAAGC TERM 2915 3038400 - 3038425 + r 81 -12 -2.79796 | opp_overlap 3038400 3038404, overlap 3038404 ATCGTGTAAAAACAA CAAATCCAGC CTGATA GCTGGATTTG TATAATCAGATAAGC TERM 2916 3038421 - 3038404 - R 84 -7.7 -4.76802 | opp_overlap 3038404 3038400, overlap 3038400 TGTAAAAACAACAAA TCCAGCC TGAT AGCTGGA TTTGTATAATCAGAT TERM 2917 3038404 - 3038421 + r 71 -7 -4.08974 | opp_overlap 3038400 3038404, overlap 3038400 TGTAAAAACAACAAA TCCAGC CTGATA GCTGGA TTTGTATAATCAGAT Patl_2505 3040069 - 3038444 - | choline/carnitine/betaine transporter TERM 2918 3038609 - 3038626 + g 70 -9.1 -3.41878 | opp_overlap 3038609 3038608, overlap 3038614 CACACACCAAAATAC GCGCTGA GGTG TCGGCGC TTCTACCTTGCCACC TERM 2919 3039516 - 3039532 + g 73 -4.3 -4.91109 | opp_overlap 3039515, overlap 3039517 GCCCAGTGATAAATC GTGGCGG CCA TCGCCAG TTTTTGTGCTGCAAC Patl_2506 3041578 - 3040226 - | hypothetical protein TERM 2920 3041139 - 3041129 - G 79 -3.2 -5.35354 | CATATAATCAAAAAA GCGA ATT TCAC CATTTAAAGTGACCC TERM 2921 3041787 - 3041802 + H 74 -6 -4.43283 | overlap 3041784 3041788 TTATTATCTAGTGAG AGCCGC CTGC GCGGCA TTTCTCTTTGTATCA TERM 2922 3041788 - 3041801 + H 73 -9.5 -3.24885 | overlap 3041787 3041784 TATTATCTAGTGAGA GCCGC CTGC GCGGC ATTTCTCTTTGTATC Patl_2507 3042922 - 3043971 + | hypothetical protein TERM 2923 3044200 - 3044174 - f 73 -8 -3.7956 | opp_overlap 3044171, overlap 3044163 3044175 CAAAGAACTCAACAA GGTTATCCACAG ATT CAGTGGATAACA CCGGTATAATTCACA TERM 2924 3044199 - 3044175 - f 80 -11.5 -2.86651 | opp_overlap 3044171, overlap 3044174 3044163 AAAGAACTCAACAAG GTTATCCACAG ATT CAGTGGATAAC ACCGGTATAATTCAC Patl_2508 3044463 - 3044846 + | hypothetical protein TERM 2925 3045309 - 3045339 + G 88 -12.7 -3.49209 | overlap 3045302 AGGCCATTACTATCA GGCCATAGCAACA CAAGA TGTTGCTATGACC TTATACATTTAATCT Patl_2509 3044851 - 3045351 + | sugar-specific permease EIIA Patl_2510 3047614 - 3045359 - | twin-arginine translocation pathway signal TERM 2926 3046542 - 3046528 - G 79 -11.4 -3.36515 | overlap 3046526 GGCCATCTTTAAACA CTGCGG TGG CCGCAG GTGGCTCCATGGGGG Patl_2511 3048111 - 3047611 - | (2Fe-2S)-binding Patl_2512 3048807 - 3048142 - | hypothetical protein TERM 2927 3048741 - 3048709 - G 72 -8.4 -3.74693 | opp_overlap 3048738, overlap 3048738 CTTGATGCCATTAAA GCGCTTACTTTGGC CTGCT GCCAACATGAGCGC CGCTATTGAAGGCGC Patl_2513 3049850 - 3048804 - | hypothetical protein TERM 2928 3049739 - 3049761 + g 71 -10.6 -2.74244 | TCATCATCATCGCAC CGGCTTTTCT ATA GGAAGAGCCG TCAGTTTCTATGATG Patl_2514 3051216 - 3049855 - | RDD domain-containing protein TERM 2929 3050196 - 3050185 - G 77 -3.6 -5.17488 | overlap 3050186 AATACTAAAATAAAA GGCC GCCC AGCC AAACCCAAGGCCAAG TERM 2930 3050933 - 3050914 - G 74 -8.6 -3.86194 | gap 1, overlap 3050903 AATGGCCGTGACAAA TCGCAGCGA AAT TCGC-GCGA CATTAAAGCGTTTTT Patl_2515 3052408 - 3051230 - | hypothetical protein TERM 2931 3051719 - 3051704 - G 83 -6.2 -5.0538 | overlap 3051707 CCCCACGTCAAAAAA CATCAA CACC TTGATG GCATTGCGCCGGATA Patl_2516 3053244 - 3052408 - | ATPase TERM 2932 3054236 - 3054226 - g 74 -5.4 -4.62069 | opp_overlap 3054233, overlap 3054233 TCGTTACCTTAAAAA TACC CAA GGTA AAGCCATTACCTCTG Patl_2517 3053657 - 3054622 + | cysteine synthase A TERM 2933 3054697 - 3054658 - f 100 -25.4 -3.30243 | opp_overlap 3054662 3054668, overlap 3054662 3054668 ACTCAGCGCTTAGAA GAAAGTAAAAGGGAGGCA TTTT TGCCTCCCTTTTACTTTC TAGATATCGCAGGTA TERM 2934 3054693 - 3054662 - f 100 -20.4 -4.30987 | opp_overlap 3054662 3054668, overlap 3054658 3054668 AGCGCTTAGAAGAAA GTAAAAGGGAGGCA TTTT TGCCTCCCTTTTAC TTTCTAGATATCGCA TERM 2935 3054662 - 3054693 + F 100 -20.4 -3.95073 | opp_overlap 3054662 3054658 3054668, overlap 3054668 AGCGCTTAGAAGAAA GTAAAAGGGAGGCA TTTT TGCCTCCCTTTTAC TTTCTAGATATCGCA TERM 2936 3054687 - 3054668 - f 100 -13.6 -4.70353 | opp_overlap 3054662 3054668, overlap 3054662 3054658 TAGAAGAAAGTAAAA GGGAGGCA TTTT TGCCTCCC TTTTACTTTCTAGAT TERM 2937 3054668 - 3054687 + F 100 -13.6 -4.62475 | opp_overlap 3054668 3054662 3054658, overlap 3054662 TAGAAGAAAGTAAAA GGGAGGCA TTTT TGCCTCCC TTTTACTTTCTAGAT TERM 2938 3054879 - 3054889 + G 80 -6.8 -4.59109 | ATATACCCGAATACG CTGC AGT GCAG TTTTTCAGCCATATC Patl_2518 3054749 - 3055201 + | putative lipoprotein Patl_2519 3055302 - 3056471 + | hypothetical protein Patl_2520 3056508 - 3056876 + | hypothetical protein Patl_2521 3057335 - 3056904 - | signal transduction protein Patl_2522 3057722 - 3058309 + | rhomboid family membrane protein TERM 2939 3058529 - 3058559 + G 79 -9.8 -3.68351 | opp_overlap 3058526 TTGCGGTACACACGT CACGCTAACCTC TGAGGAT GACGTTAGCGTG TTTGACTCATCCGAA Patl_2523 3058374 - 3058805 + | glutathione-dependent formaldehyde-activating, GFA TERM 2940 3058904 - 3058879 - T 100 -15.5 -5.24129 | opp_overlap 3058879 TTTTTCGATAAAAAA GCCCGCTGAAC ATAC GTTCAACGGGC TTTCTCACAACTGAA TERM 2941 3058879 - 3058904 + T 100 -13.3 -3.86897 | opp_overlap 3058879 TTTTTCGATAAAAAA GCCCGCTGAAC ATAC GTTCAACGGGC TTTCTCACAACTGAA TERM 2942 3058936 - 3058956 + T 79 -8.3 -3.98214 | overlap 3058937 TTATTAAGCAGGTTA CTTGTCAGC GCG GCTGACAAA TTTATGCTCGCTGGT TERM 2943 3058937 - 3058955 + T 82 -11.8 -2.98447 | overlap 3058936 TATTAAGCAGGTTAC TTGTCAGC GCG GCTGACAA ATTTATGCTCGCTGG Patl_2524 3059505 - 3058933 - | elongation factor P TERM 2944 3059675 - 3059655 - R 86 -7.6 -5.0925 | gap 1, opp_overlap 3059655 GCCTAAAAGTAAAAA GCCCAG-AC AGTC GTGCTGGGC TTTGAGTTAACCACT Patl_2525 3062268 - 3059716 - | peptidase S9, prolyl oligopeptidase active site region Patl_2526 3062452 - 3062994 + | glutathione peroxidase TERM 2945 3063011 - 3063044 + T 72 -9.8 -3.0806 | gap 1, opp_overlap 3063019, overlap 3063019 CACCCTTTACTACAT GTTAAAAA-GCCCGA TTGAC TCGGGCTTTTTTAGC TATTAAACGTTTAAA TERM 2946 3063035 - 3063019 - T 91 -9.4 -4.65168 | opp_overlap 3063011 3063019 ACTACATGTTAAAAA GCCCGA TTGAC TCGGGC TTTTTTAGCTATTAA TERM 2947 3063019 - 3063035 + T 93 -9.4 -5.1615 | opp_overlap 3063019, overlap 3063011 ACTACATGTTAAAAA GCCCGA TTGAC TCGGGC TTTTTTAGCTATTAA Patl_2527 3063663 - 3063055 - | (Acyl-carrier protein) phosphodiesterase Patl_2528 3064877 - 3063765 - | nitrate transporter, putative Patl_2529 3065508 - 3064870 - | response regulator receiver/ANTAR domain-containing protein Patl_2530 3067028 - 3065943 - | hypothetical protein Patl_2531 3068220 - 3067192 - | uroporphyrin-III C-methyltransferase TERM 2948 3068029 - 3068009 - G 71 -9.7 -3.12749 | opp_overlap 3067991 3067989 CCAATAAGGTGAACA TGCCCTACA CCA TGTTGGGCA TTAGCCTTATTTGCG Patl_2532 3071120 - 3068217 - | molybdopterin oxidoreductase TERM 2949 3069695 - 3069682 - G 80 -5.9 -5.00616 | opp_overlap 3069690, overlap 3069683 GTGGGCGGTAAAAAA CCCCG CTGG CGGGA AATTCTGCGTTCTGA TERM 2950 3069827 - 3069841 + g 72 -5.8 -4.4727 | CCATTTCACATTTGT TTAAAG CGG CTTTAA TTTTATGCCTATTGG TERM 2951 3071179 - 3071163 - R 75 -10.1 -3.15249 | TATAGGCTGCATCAA GGTGGCA TTA CGCCACC GCTAGCTGCACCTTG Patl_2533 3071514 - 3071170 - | nitrite reductase (NAD(P)H), small subunit Patl_2534 3074110 - 3071525 - | nitrite reductase (NAD(P)H), large subunit TERM 2952 3072318 - 3072328 + g 76 -4 -5.03145 | overlap 3072311 CCTGTGACCTTGGTA TACA AGT TGTA TTTTTTCGCAACTTG TERM 2953 3073011 - 3073023 + g 85 -3.4 -5.60993 | AGCACACTTTGCTCA TGGT TAACC ACCA TTTTTTTATACACGC TERM 2954 3074067 - 3074055 - G 82 -7.7 -4.63486 | opp_overlap 3074050 3074055 ATTTGCTCAACAAAA TGGTG GCC CACCA TTCCGTTTCCTACCA TERM 2955 3074162 - 3074196 + H 75 -7.9 -4.011 | gap 1, opp_overlap 3074162 TTGCCCATAAAAAAA GCCCACGC-GACTG AGTGCTAA CAGTCTGAGTGGGC TTCTTTGCCTGTTCC TERM 2956 3074196 - 3074162 - H 100 -7.9 -5.60993 | gap 1, opp_overlap 3074162 TTGCCCATAAAAAAA GCCCACGC-GACTG AGTGCTAA CAGTCTGAGTGGGC TTCTTTGCCTGTTCC Patl_2535 3074687 - 3075568 + | GumN TERM 2957 3075640 - 3075664 + G 78 -6.3 -4.63932 | opp_overlap 3075633 3075637, overlap 3075641 ACACTAACCAAAGCG CTCGCCTTGCG TTA CGCGAGGCAAA TTTTATTGCCAGCTA TERM 2958 3075641 - 3075663 + G 73 -9.8 -3.37877 | opp_overlap 3075633 3075637, overlap 3075640 CACTAACCAAAGCGC TCGCCTTGCG TTA CGCGAGGCAA ATTTTATTGCCAGCT Patl_2536 3075604 - 3076374 + | UBA/THIF-type NAD/FAD binding fold Patl_2537 3076514 - 3077761 + | molybdenum cofactor synthesis domain-containing protein TERM 2959 3078067 - 3078079 + G 79 -9.1 -4.11869 | TGCCCTACTGTCCTT GGTGC TCA GCACC TTTCTGGATTTTTTC Patl_2538 3077762 - 3079126 + | MATE efflux family protein Patl_2539 3079273 - 3080610 + | Serine-type D-Ala-D-Ala carboxypeptidase Patl_2540 3081454 - 3080657 - | extracellular solute-binding protein TERM 2960 3081424 - 3081405 - G 71 -8 -3.92324 | AAACCAGATAAAACA GATAATGA ATCG TCATTATC ACCCAGCATGGGGTT TERM 2961 3081677 - 3081718 + r 81 -11.7 -2.59323 | opp_overlap 3081681 3081683, overlap 3081676 ACTCGAGCTTATTTA GATACAGCTCAATGAGATA ATCT TATCCCATTGAGCTGTCAC ATTCTGAGCACTTTT TERM 2962 3081714 - 3081681 - R 100 -17.7 -2.91582 | opp_overlap 3081677 3081676, overlap 3081683 GAGCTTATTTAGATA CAGCTCAATGAGATA ATCT TATCCCATTGAGCTG TCACATTCTGAGCAC TERM 2963 3081712 - 3081683 - R 95 -14.5 -3.0094 | opp_overlap 3081677 3081676, overlap 3081681 GCTTATTTAGATACA GCTCAATGAGATA ATCT TATCCCATTGAGC TGTCACATTCTGAGC TERM 2964 3081758 - 3081748 - R 73 -6.8 -4.14392 | TGTTAATGCCTAAAA CTGC TAA GCAG TGCCGGAATACCCGG Patl_2541 3083252 - 3081735 - | xanthine/uracil/vitamin C permease TERM 2965 3082391 - 3082416 + g 72 -10.5 -2.78032 | gap 1, overlap 3082390 3082388 CCATAAAACTCTCAA CGGTTGGCATGC CAA GCAT-CCAGCCG GTATTTTCGCCCCAC TERM 2966 3082533 - 3082501 - G 73 -2.5 -5.14563 | overlap 3082510 3082524 GCGCCTAGCAAAAAA GCAACAACACCGCCC ATA AGGCAGCTTAGTGGC ACCGCCAGCCAGCGC TERM 2967 3083023 - 3083036 + g 70 -9.5 -2.94034 | opp_overlap 3082993 ACCTTGCCAATTGTT CCGGC CAGT GCCGG TATCGTATCTTCTAT TERM 2968 3083309 - 3083291 - H 82 -3.9 -5.45802 | overlap 3083293 TGCTGAAAATAAAAA TCGCTTT CGTTT AAAGCAA AATTGAACAGAAGCG Patl_2542 3083417 - 3084037 + | lysine exporter protein LysE/YggA Patl_2543 3084508 - 3084125 - | hypothetical protein TERM 2969 3084728 - 3084718 - g 74 -6.8 -4.32951 | overlap 3084726 ACTTGAACCAAGAAA GGCT AGA AGCC AAACAAATTGACTCC TERM 2970 3084758 - 3084772 + G 100 -5.6 -5.81622 | opp_overlap 3084751 3084748 3084760, overlap 3084760 CAACACTAGCCTACT AAGGCC CGT GGCCTA TTTTTTTGGTTTTCT TERM 2971 3084760 - 3084770 + G 81 -8.2 -4.51121 | opp_overlap 3084751 3084748 3084760, overlap 3084758 ACACTAGCCTACTAA GGCC CGT GGCC TATTTTTTTGGTTTT TERM 2972 3086362 - 3086385 + G 70 -4.7 -4.39426 | ATTTGACTAAGCCTG TCGATTTTG ACGCAC TAAAATCGA TTTTGTACAAATATC Patl_2544 3084705 - 3086423 + | periplasmic sensor hybrid histidine kinase TERM 2973 3086448 - 3086405 - T 87 -12.6 -3.32024 | overlap 3086403 3086399 GTACAAATATCAACA CGCTAATCTCGAACAGTAAT ACAA ACTACCTTTCGAGGTTAGCG CCGCAAGATTGCTAA Patl_2545 3087249 - 3086533 - | SapC Patl_2546 3088864 - 3087311 - | tryptophan halogenase TERM 2974 3087858 - 3087871 + g 78 -5.3 -5.03994 | CCAATGGCAACGCAG TTCTG GTGC CAGAA TTTTTCTCTGTGCCC TERM 2975 3088959 - 3088976 + r 70 -9.8 -2.69489 | opp_overlap 3088959, overlap 3088956 CACCGATAATAAAAA GCCGCC CATAAA GGCGGC TCGATTTAATGCTTA TERM 2976 3088976 - 3088959 - R 100 -10.5 -5.20333 | opp_overlap 3088956 3088959 CACCGATAATAAAAA GCCGCCC ATAA AGGCGGC TCGATTTAATGCTTA Patl_2547 3091822 - 3089048 - | TonB-dependent receptor TERM 2977 3091250 - 3091264 + g 75 -10 -3.60792 | overlap 3091263 ACCTGTGTCTACACT GGAGTC ATG GACTCC TTTGACACTTGCAAA TERM 2978 3091955 - 3091944 - H 78 -3 -5.40014 | AAACAATAATAAAAA TTGT AGTA ACAA GTCAATCTAAATCAA Patl_2548 3092215 - 3092316 + | hypothetical protein TERM 2979 3092353 - 3092336 - T 95 -8.4 -5.46129 | GAAGAAATTAAAAAA GCCGCT TCAAAG AGCGGC TTGGAATTTAGCACC Patl_2549 3093010 - 3092399 - | GntR family transcriptional regulator TERM 2980 3093671 - 3093661 - g 74 -5.4 -4.65895 | TTTTCCACTGAAAAA TTGC TCG GCAA TATCCAAGGCTACTT Patl_2550 3093175 - 3094311 + | mandelate racemase/muconate lactonizing-like protein TERM 2981 3094604 - 3094616 + G 72 -9.1 -3.54935 | GCGGTGAATGCCCTA CCTGC GAA GCAGG TTTAACGCACATTTG Patl_2551 3094321 - 3095346 + | alcohol dehydrogenase GroES-like protein TERM 2982 3095589 - 3095599 + G 80 -6.8 -4.63486 | TTTTCAGACCGTGAT GCGT TGT ACGC TTTTATTAAAGAAGT TERM 2983 3096052 - 3096062 + G 73 -4.6 -4.78149 | opp_overlap 3096052 CTGACGACTTCAAAG GGCC TGC GGTC TTTTTAGCTTCTGAC Patl_2552 3095373 - 3096137 + | short-chain dehydrogenase/reductase SDR Patl_2553 3096143 - 3097606 + | betaine-aldehyde dehydrogenase TERM 2984 3097763 - 3097738 - T 86 -9.1 -4.3208 | opp_overlap 3097738 CCCTACAACCCAAAA GGGTAAACTTA GCAA TAGGTTTACCC TTTTTTATGACCTTT TERM 2985 3097738 - 3097763 + T 100 -11.3 -5.28826 | opp_overlap 3097738 CCCTACAACCCAAAA GGGTAAACTTA GCAA TAGGTTTACCC TTTTTTATGACCTTT Patl_2554 3098699 - 3097836 - | dethiobiotin synthase Patl_2555 3099714 - 3098767 - | methyltransferase type 11 TERM 2986 3099142 - 3099084 - G 81 -12.7 -3.21099 | gap 2, overlap 3099132 TGCGCTGACTATCAA CGTGCT-GCCAACATGTATCTA-GCTC GTGCATG GAGCCTTGACACATGATGGCCAGCACG CCACTTGCCCCAGGG Patl_2556 3100960 - 3099728 - | 8-amino-7-oxononanoate synthase TERM 2987 3100921 - 3100939 + g 82 -13.1 -3.06796 | ATAAGTTGTCTTTGC GCCGCGC GGCGA GCGCGGC TTGAATAAAATCAAA Patl_2557 3102069 - 3100960 - | biotin synthase Patl_2558 3102168 - 3103448 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase Patl_2559 3104410 - 3103496 - | hypothetical protein TERM 2988 3104531 - 3104514 - R 83 -4.8 -5.24129 | CGGTTCGACAAAAAA GCGCAG TACTGC CTGCAC AAATCAGACAGCAAG Patl_2560 3105086 - 3104709 - | invasion gene expression up-regulator, SirB Patl_2561 3106725 - 3105172 - | response regulator receiver modulated metal dependent phosphohydrolase Patl_2562 3107727 - 3106831 - | HemK family modification methylase Patl_2563 3108821 - 3107733 - | peptide chain release factor 1 Patl_2564 3110194 - 3108923 - | shikimate/quinate 5-dehydrogenase TERM 2989 3108994 - 3109006 + g 100 -9.1 -5.5943 | overlap 3108993 TATTTTTATTATCTT GCTGC ATA GCAGC TTTTTTTAATGCTTT Patl_2565 3110284 - 3110940 + | outer membrane lipoprotein LolB TERM 2990 3111628 - 3111643 + G 72 -5.4 -4.4572 | opp_overlap 3111612 3111611 3111628 CGCCGTCTCGAATGA CAGGCA CAGG TGCTTG TTTATTTGCGGTCTT Patl_2566 3110925 - 3111785 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 2991 3111810 - 3111797 - f 80 -8.1 -4.42238 | CTAGCGCAAGTAAAA CGCGT CATT ACGCG GCGAAAGGTTATATT TERM 2992 3112092 - 3112102 + G 73 -2.4 -5.19328 | opp_overlap 3112086 ACATGAAAATGTGCG CGGC TCA GACG TTTTTATTATCCAAT TERM 2993 3112385 - 3112396 + G 74 -5.8 -4.67982 | CTGTTGATAACGCCT TCGG TACA CCGA TTTTGTTAGATGACA Patl_2567 3111946 - 3112893 + | ribose-phosphate pyrophosphokinase TERM 2994 3112919 - 3112935 + F 100 -9.4 -5.33785 | GTGAGAATCTATTGA GCCGCT TTTAC AGCGGC TTTTTTGTGCTCATT Patl_2568 3113044 - 3114120 + | MscS mechanosensitive ion channel Patl_2569 3114367 - 3115008 + | 50S ribosomal protein L25/general stress protein Ctc TERM 2995 3115006 - 3115032 + F 75 -9.6 -3.31461 | opp_overlap 3115009 3115024 3115029 3115030, overlap 3115009 GAAGCTGCTGCGGAA TAAGTTGTTTGT CTA ACATACAACTTA TTGTAGGCCTGGGTA TERM 2996 3115136 - 3115148 + G 79 -2.7 -5.32944 | overlap 3115137 CAATTGTACTCTGAG TTTAC AAA GTAAG TTTTTTGGTTATACC Patl_2570 3115014 - 3115598 + | peptidyl-tRNA hydrolase Patl_2571 3115643 - 3116734 + | translation-associated GTPase TERM 2997 3116799 - 3116782 - f 90 -9.9 -4.41348 | opp_overlap 3116782 CTTTTTTGAAAGAAA CAGAGCT TTTT AGCTCTG TTTTTTTATGCCTAG TERM 2998 3116782 - 3116799 + F 100 -9.9 -5.64274 | opp_overlap 3116782 CTTTTTTGAAAGAAA CAGAGCT TTTT AGCTCTG TTTTTTTATGCCTAG Patl_2572 3117012 - 3118256 + | extracellular solute-binding protein Patl_2573 3118449 - 3118892 + | hypothetical protein TERM 2999 3120519 - 3120502 - f 93 -11.3 -4.61231 | opp_overlap 3120502 GTATATGCTTAAAAA GCCAGAC TAAT GTCTGGC TTTTTTCGTTTGAGC TERM 3000 3120502 - 3120519 + F 100 -11.3 -5.37593 | opp_overlap 3120502 GTATATGCTTAAAAA GCCAGAC TAAT GTCTGGC TTTTTTCGTTTGAGC TERM 3001 3120762 - 3120783 + G 72 -5.3 -4.72029 | opp_overlap 3120779 TTATCATTGCGGGAG TTTGGTTTA CCTT TAAACTAAA TTTTATTCAGTTACG Patl_2575 3120677 - 3122092 + | amino acid carrier protein TERM 3002 3122193 - 3122144 - T 93 -13.7 -2.93853 | gap 1, opp_overlap 3122156, overlap 3122156 CCTTCTCAAGTAAAT TACCAGTAAAAAGCCGCGGTGACG TTA CGTC-CAGCGGCTTTTTACTGTCC CGTTTACCGGTCTAG TERM 3003 3122156 - 3122181 + T 93 -11.1 -4.80882 | gap 1, opp_overlap 3122156 3122144 AATTACCAGTAAAAA GCCGCGGTGACG TTA CGTC-CAGCGGC TTTTTACTGTCCCGT TERM 3004 3122181 - 3122156 - T 93 -11.1 -4.7871 | gap 1, opp_overlap 3122156, overlap 3122144 AATTACCAGTAAAAA GCCGCGGTGACG TTA CGTC-CAGCGGC TTTTTACTGTCCCGT Patl_2576 3122791 - 3122222 - | NADPH-dependent FMN reductase Patl_2577 3125001 - 3123109 - | hypothetical protein Patl_2578 3126201 - 3125056 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 3005 3126631 - 3126619 - g 87 -10.5 -4.08767 | opp_overlap 3126619 3126618 TGTAGCCGTTCAAAA CGCCG ATT CGGCG CTTGCTGCATGTAAA TERM 3006 3126619 - 3126631 + G 70 -10.5 -2.52015 | opp_overlap 3126619, overlap 3126618 TGTAGCCGTTCAAAA CGCCG ATT CGGCG CTTGCTGCATGTAAA TERM 3007 3126753 - 3126739 - g 100 -8.6 -5.72616 | overlap 3126726 AGCCAGACAAAAAAA TCTGGT TAA ACCAGA AACCGTGTTCGCGGT Patl_2579 3126506 - 3128149 + | response regulator receiver protein Patl_2580 3128146 - 3128430 + | hypothetical protein Patl_2581 3130200 - 3128554 - | diguanylate cyclase with PAS/PAC sensor Patl_2582 3130643 - 3130197 - | hypothetical protein Patl_2583 3131938 - 3130640 - | hypothetical protein TERM 3008 3132386 - 3132410 + r 100 -15.8 -3.09015 | opp_overlap 3132386 TGAAGTCGTAAGGAA CCTAGCGGTG AAGAC CACCGCTAGG TTAGGTGAATATACA TERM 3009 3132410 - 3132386 - R 100 -16.5 -3.35867 | opp_overlap 3132386 TGAAGTCGTAAGGAA CCTAGCGGTGA AGA CCACCGCTAGG TTAGGTGAATATACA Patl_2584 3134833 - 3132500 - | hypothetical protein TERM 3010 3134016 - 3134039 + g 82 -7.4 -4.60889 | overlap 3134018 3134036 TGAGTGCGTACTTCT CCTGAAAGCG TGCC CGCTTTCGCG TTTTTACGGGTAATT TERM 3011 3134107 - 3134121 + g 72 -8.6 -3.8046 | opp_overlap 3134106 AGACTTGGTAATCAC CTGTGA ACG TCACAG TTTGGCCTTTTTGCA TERM 3012 3135065 - 3135037 - R 100 -11.7 -5.39755 | TACAAGTACAAAAAA GGCCACAAACAGA GAG TCTGAATGTGGCC TCATAGGGTCAGTAA Patl_2585 3137455 - 3135083 - | TonB-dependent receptor TERM 3013 3136162 - 3136177 + g 79 -2.6 -5.32882 | gap 1, overlap 3136165 TCCAGGTAAAGTCAC CGTTTAC GCC GTA-ACG TTTTTTATCATAATG TERM 3014 3136352 - 3136342 - G 73 -4 -4.73614 | GATTAGTAAAATAAA TCAA ACC TTGA GATGCGCCGCCATAG Patl_2586 3138764 - 3137547 - | putative quaternary ammonium permease Patl_2587 3140539 - 3138869 - | choline dehydrogenase TERM 3015 3138925 - 3138946 + g 82 -10.9 -3.5393 | AAGTCGCAACCGTTA CCTGCGCTT GGCT AAGTGCAGG TTTGCCCAAAATCAT TERM 3016 3140396 - 3140411 + g 80 -6.2 -4.87665 | GGACAGCGCAGTGGG CATCTT GATA AAGATG TTTTTATCGCTGCCG Patl_2588 3142014 - 3140539 - | betaine aldehyde dehydrogenase Patl_2589 3142594 - 3142004 - | transcriptional regulator BetI TERM 3017 3143113 - 3143103 - H 77 -8.2 -4.24204 | overlap 3143104 TAGCCATATCCAAAA CGCC CTA GGCG CGCTACTATTGACGT Patl_2590 3143163 - 3144359 + | acetate kinase TERM 3018 3146200 - 3146187 - g 77 -3.8 -5.11033 | GACAAGGTTAAAAAA GCCA CGGAAC TGGC ACAACAAAAAAGACC Patl_2591 3144369 - 3146513 + | phosphate acetyltransferase Patl_2592 3147651 - 3146680 - | 6-phosphofructokinase Patl_2593 3148374 - 3147691 - | phosphoglycerate mutase 1 family protein TERM 3019 3148496 - 3148508 + H 77 -4.8 -4.91109 | opp_overlap 3148487, overlap 3148488 ATTCAACGCTCTGTT GTGC AACAG GCAC TTTTTGTGGTGCAGA TERM 3020 3148646 - 3148660 + H 73 -10 -2.85056 | opp_overlap 3148654, overlap 3148633 GGGCTGTCGGTGTGC CCGTCA AAC TGACGG CTTTCAGTTACGAGT TERM 3021 3148746 - 3148733 - H 71 -6.7 -4.06182 | overlap 3148731 TTACGCATAAAAATA GCCTT AAGT AAGGC GTAAAATATCGGTGA Patl_2594 3149083 - 3151521 + | phosphoenolpyruvate synthase TERM 3022 3151593 - 3151561 - f 83 -7.1 -4.80178 | gap 1, overlap 3151562 GAGCAAGGAAGAAAA TGTGCGCAGTAGTC AAACAA GACTACTGC-CACT TCACGTTAGTGTTAT TERM 3023 3151592 - 3151562 - f 82 -10.6 -3.47023 | gap 1, overlap 3151561 AGCAAGGAAGAAAAT GTGCGCAGTAGTC AAACAA GACTACTGC-CAC TTCACGTTAGTGTTA TERM 3024 3153022 - 3153036 + G 71 -7 -4.04897 | CGGTGCTGCTGCGCG CACGCC ACT GGCGAG TTTAGTTATGATTAT Patl_2595 3151913 - 3153547 + | Cl- channel, voltage gated TERM 3025 3153554 - 3153581 + T 95 -14.2 -3.12005 | opp_overlap 3153554 GCTGTGTAATATATA TGTGACGCGGGA TTAC TCCCGCATCACA TGTTACGCTTGTGTG TERM 3026 3153581 - 3153554 - T 100 -16.4 -3.09273 | opp_overlap 3153554 GCTGTGTAATATATA TGTGACGCGGGA TTAC TCCCGCATCACA TGTTACGCTTGTGTG Patl_2596 3154614 - 3153601 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 3027 3155087 - 3155118 + H 81 -6.7 -4.7173 | gap 2, overlap 3155087 GTACCGACCTCTTTT GG-GCCCATC-AGTA TCAC TGCTAGATGGGCTCC TTTTTACGTGTCATC TERM 3028 3155087 - 3155117 + H 72 -9.1 -3.42315 | gap 1, overlap 3155087 GTACCGACCTCTTTT GGGCCCATC-AGTA TCAC TGCTAGATGGGCTC CTTTTTACGTGTCAT Patl_2597 3155331 - 3155552 + | hypothetical protein Patl_2598 3156836 - 3155628 - | transposase, IS4 TERM 3029 3156446 - 3156430 - G 71 -9.5 -3.18023 | overlap 3156428 GGATTATGACTAACA GGTGAAT TGT ATTCACC GAATGAAAATACGCG Patl_2599 3161396 - 3157083 - | SNF2-related TERM 3030 3160553 - 3160573 + g 76 -4.7 -4.74285 | AACAATAAGTGCCTC GCAGCTG CAACCCA TAGCTGC TTTTGTCTTGTGGAT Patl_2600 3162447 - 3161674 - | hypothetical protein TERM 3031 3163316 - 3163287 - g 77 -10.7 -3.33492 | opp_overlap 3163286 GCACCTACCCGAGAA TTCGCGCTGCGGT GAAA ACCGCCGCACAAA ATATTCGGGAGAAAA Patl_2601 3162875 - 3163339 + | (2Fe-2S)-binding TERM 3032 3163476 - 3163456 - g 78 -5.3 -5.01732 | overlap 3163460 AACCCGCTTAAAAAA GGACTTGCC CCA GGCAATACC GCCCTGACACCTTAT Patl_2602 3163336 - 3165585 + | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Patl_2603 3165596 - 3166216 + | hypothetical protein TERM 3033 3166273 - 3166241 - T 83 -4.9 -5.22039 | gap 1, opp_overlap 3166241 TTCAAAGGTAAAAAA CGGGTACCCAG-CA TAATAT TGCCTTGATACCCG TTTACCCGTTGCTGA Patl_2604 3168426 - 3166306 - | TonB-dependent receptor Patl_2605 3168813 - 3168502 - | hypothetical protein TERM 3034 3168775 - 3168751 - G 84 -5 -5.40014 | AAACAACAACAAAAA CACGACGCTA TATTT CAGCATCATG GGCTTGATTAGGGTT TERM 3035 3169172 - 3169152 - R 72 -9.7 -3.06696 | opp_overlap 3169141 3169139 TCGCTGCCCAATACA GGGCACC TTTTACT GGTGCCC TACACATCGTCTCAT Patl_2606 3169778 - 3169218 - | hypothetical protein TERM 3036 3169449 - 3169438 - G 72 -5.8 -4.38154 | AGACCCGGCACAAAA GGGT TATT ACCC GCGATGAAATGTAAG Patl_2607 3171370 - 3169916 - | twin-arginine translocation pathway signal TERM 3037 3170647 - 3170634 - G 76 -4.5 -4.94992 | opp_overlap 3170634 TCAAACTTATAAAAA GCAGA CGAA CCTGC ATCTTCCGTTTCATA TERM 3038 3170680 - 3170670 - G 70 -2.4 -4.99043 | overlap 3170671 GTTTCATAAACAAAA CCTG TGG CTGG GTCAACCGCTGCTGC Patl_2608 3172345 - 3171554 - | Sec-independent protein translocase, TatC subunit Patl_2609 3172770 - 3172342 - | hypothetical protein Patl_2610 3173105 - 3172824 - | twin arginine-targeting protein translocase Patl_2611 3173290 - 3173835 + | hypothetical protein Patl_2612 3173898 - 3174239 + | putative 5-carboxymethyl-2-hydroxymuconate delta isomerase TERM 3039 3174332 - 3174360 + F 77 -6.1 -4.52589 | opp_overlap 3174332 3174354 CGCCTTGATTAAAAA TAGCCGCTA TTAGTTAAATT TAGCGGCTA TTTTGTATAGCCCAA TERM 3040 3174360 - 3174332 - f 80 -6.1 -4.72272 | opp_overlap 3174332, overlap 3174354 CGCCTTGATTAAAAA TAGCCGCTA TTAGTTAAATT TAGCGGCTA TTTTGTATAGCCCAA TERM 3041 3175979 - 3175967 - g 74 -5.5 -4.59089 | GAACTTAGAAACAAA GCACT TGA AGCGC GAGTAATTGAAGAGG Patl_2613 3174839 - 3176086 + | patatin Patl_2614 3177342 - 3176455 - | hypothetical protein TERM 3042 3177676 - 3177638 - R 93 -10.4 -4.78933 | opp_overlap 3177645 TGAAAATATATAAAA CGCATCAATTAGGAGGTT CGC AAGCTCCTAACTATTGCG CTGGTGTTCACGACA Patl_2615 3178376 - 3177867 - | hypothetical protein Patl_2616 3179670 - 3178609 - | beta-lactamase TERM 3043 3180352 - 3180368 + H 72 -10.1 -2.71791 | overlap 3180351 3180354 CCTGTTAATGCATTT CGTGCGC CCA GCGCATG CTTTGGCGACAAAGT TERM 3044 3180374 - 3180386 + H 70 -9.1 -3.22314 | overlap 3180372 3180371 CCAGCGCATGCTTTG GCGAC AAA GTCGC TGCTTTTGATTTACA TERM 3045 3181333 - 3181357 + G 77 -11.3 -3.28785 | overlap 3181328 ACTCATGAGTTTAGA GCCCGCCATCG CGG CCTTGGCGGGC TTGGCTATTTTGGGC Patl_2617 3180605 - 3181474 + | hypothetical protein Patl_2618 3182610 - 3181690 - | LysR family transcriptional regulator Patl_2619 3182773 - 3183378 + | short chain dehydrogenase TERM 3046 3183465 - 3183499 + T 93 -14.4 -2.88544 | opp_overlap 3183462 3183459, overlap 3183476 TAAAGAGAATTACCG GGCATTCAACGCACTT TTA GAGTGTGTTGAAAGCC TGTATGCAAATGAGC Patl_2620 3184147 - 3183929 - | hypothetical protein TERM 3047 3184944 - 3184912 - g 71 -7 -4.18018 | gap 1, opp_overlap 3184912 3184911 TGTGGCCACGTAAAA GGAGTGGCTGAAGGC ATTA GCCTT-AGCCAAACC ATTTCAATGTTCAAC Patl_2621 3184537 - 3185418 + | metal-dependent protein hydrolase TERM 3048 3185453 - 3185430 - T 90 -8.9 -4.84363 | gap 1, opp_overlap 3185430 3185427 CTAAAGCACCAAAAA GGGCAAC-GC ATAAA GCTGTTGCCC TGCTTATCATCTATT Patl_2622 3186564 - 3185878 - | AraC family transcriptional regulator TERM 3049 3186508 - 3186523 + g 74 -6.8 -4.34488 | opp_overlap 3186496 AATTCCACTGCCAGC GTCGCT GTAC AGCGGC TTTGTTATCGGTGTA Patl_2623 3187096 - 3186635 - | alkylhydroperoxidase TERM 3050 3187250 - 3187262 + H 70 -9.1 -3.11579 | overlap 3187248 3187247 3187254 TGCTTCTCTACTTTG GCGAC AAA GTCGC TGCTTTGCTTTTGCT TERM 3051 3187361 - 3187375 + H 73 -7.1 -4.07568 | opp_overlap 3187359 3187353 AATCTAAGTGAAAGC CGCGT CGGGA ACGCG TTTTCACGACCAGAG TERM 3052 3187478 - 3187492 + H 88 -11.4 -3.53444 | opp_overlap 3187473 AAAAAGTAGATCGAG CCCTCG GGA CGAGGG TTTGAAAAAGCGTCA Patl_2624 3187786 - 3188940 + | Rieske (2Fe-2S) region TERM 3053 3189709 - 3189689 - g 75 -9.7 -3.50358 | AAAGAAGTAGCACAA CGCTTAACC AGC GGCCAAGCG CCTGAAGCCGAAGGT Patl_2625 3189038 - 3189772 + | NUDIX hydrolase TERM 3054 3189834 - 3189846 + T 70 -9.1 -3.23921 | overlap 3189832 3189831 AAAGCGAATGCTTTG GCGAC ACC GTCGC TGCTTTTGATTTATG Patl_2626 3190409 - 3189960 - | hypothetical protein TERM 3055 3190566 - 3190578 + r 70 -9.1 -3.22314 | overlap 3190564 3190563 GAAGCTCATGCTTTG GCGAC AAA GTCGC TGCTTTTGATTTACA TERM 3056 3191099 - 3191111 + r 79 -9.1 -3.90744 | opp_overlap 3191098 3191097 GCTGAAGTAAAATCG TGGGC GAA GCCCA TTCTTTGGCGACAAA TERM 3057 3191119 - 3191131 + r 70 -9.1 -3.18389 | overlap 3191117 3191116 GAAGCCCATTCTTTG GCGAC AAA GTCGC TGCTTTTGATGTTCC TERM 3058 3191218 - 3191232 + r 73 -7.1 -4.07568 | opp_overlap 3191216 3191210 AATCTAAGTGAAAGC CGCGT CGGGA ACGCG TTTTCACGACCAGAG TERM 3059 3191515 - 3191487 - R 73 -8.7 -3.73534 | opp_overlap 3191486, overlap 3191508 GAAGGCTATCAATAA GCGCAGCGCATGC TTA GCACACGCAGTGC GTAGACAGCGAAGCT Patl_2628 3192273 - 3191560 - | cold-shock DNA-binding domain-containing protein TERM 3060 3192511 - 3192474 - H 70 -9.9 -2.57132 | overlap 3192473 3192493 CTTGTTCTTGACAAT TCTTAGCGCTTTGCCAC AATT GTGGCAAGACGCTACAA TTAAACCATACAAAT TERM 3061 3192597 - 3192584 - g 74 -3.8 -4.9218 | overlap 3192595 GAGCTAGTAGAAAAA GCCA GCATAA TGGC TAAAGCACTTAACCG Patl_2629 3192536 - 3192760 + | hypothetical protein Patl_2630 3192753 - 3193043 + | hypothetical protein Patl_2631 3194204 - 3193926 - | hypothetical protein TERM 3062 3194047 - 3194034 - G 81 -5.3 -5.15634 | overlap 3194008 TATTTGAGCAAAAAA GTGAT TGCG ATCAC ATGCACAATATTGGT TERM 3063 3194456 - 3194468 + r 70 -9.1 -3.26499 | opp_overlap 3194451, overlap 3194454 3194453 ATAGCGAATACCTTG GCGAC AAA GTCGC TGCTTTTGATTTTAT TERM 3064 3195108 - 3195080 - R 86 -9.5 -4.08948 | opp_overlap 3195083, overlap 3195081 3195083 3195101 GAAGGCTATAAATAA GCACCGCGCATGC TTA GCACACGCAGTGT GTAGACAGCGAAGCT TERM 3065 3195107 - 3195081 - R 91 -13 -3.04646 | opp_overlap 3195083, overlap 3195080 3195083 3195101 AAGGCTATAAATAAG CACCGCGCATGC TTA GCACACGCAGTG TGTAGACAGCGAAGC TERM 3066 3195105 - 3195083 - R 72 -9.8 -3.07135 | opp_overlap 3195083, overlap 3195081 3195080 3195101 GGCTATAAATAAGCA CCGCGCATGC TTA GCACACGCAG TGTGTAGACAGCGAA TERM 3067 3195286 - 3195274 - R 77 -4.8 -4.85599 | overlap 3195245 3195275 3195277 CGTAGCCCATAAAAA GCAC GCAAG GTGC ATAACGTTTACCTAA Patl_2633 3196228 - 3195308 - | 2OG-Fe(II) oxygenase TERM 3068 3195689 - 3195678 - G 73 -4.4 -4.77896 | TAATGAATCGAAAAA CCAA ACGT TTGG GTATCGTAACCCACT TERM 3069 3196061 - 3196073 + g 70 -9.1 -3.37493 | opp_overlap 3196046 GCTGTCAAGTGTTGC CAGCG TGT CGCTG TTGCTCTCTTCCCAC TERM 3070 3197837 - 3197849 + G 78 -6.2 -4.56978 | opp_overlap 3197811 3197837 3197836 CGGTTTCTAAGAAAG GGCG AAGGA CGCC TTTATTCTTTAGAAA Patl_2634 3196655 - 3198028 + | hypothetical protein TERM 3071 3198034 - 3198021 - T 71 -6.7 -4.12198 | TAGAAGTTCGCAAAA GTGAG TGAA CTCAC CTCGCGTTAACGACT Patl_2635 3198680 - 3198138 - | lactoylglutathione lyase TERM 3072 3198297 - 3198283 - G 71 -7.1 -4.11484 | TTCAACGCTTCAAAA CGCTG ACAGG CAGCG TCGAGGTCGGGTACG Patl_2636 3199197 - 3198784 - | GCN5-related N-acetyltransferase Patl_2637 3199461 - 3200486 + | zinc-binding alcohol dehydrogenase TERM 3073 3200613 - 3200629 + F 100 -10.8 -5.29782 | TAACCATGCTTCTCA GCCCGC TTCAC GCGGGC TTTTTTATAACTCTA TERM 3074 3200838 - 3200826 - g 82 -7.7 -4.59027 | opp_overlap 3200816, overlap 3200821 AATTACGACACAAAA GCAGA GCT TCTGC GCGTTGGCTTAGAGC TERM 3075 3200913 - 3200926 + G 74 -3.7 -5.00765 | CTGAAAAAAGCCGGT GTGCC TAAA GGCTC TTTTTATCATTACTT Patl_2638 3200754 - 3201386 + | TetR family transcriptional regulator TERM 3076 3201377 - 3201396 + F 100 -6.4 -5.85178 | TTTTTTACAGGCCCT GCCCAAAT AAGC ACTTGGGC TTTTTTTTAGATATT TERM 3077 3201611 - 3201596 - g 83 -9 -4.32177 | opp_overlap 3201596 TGACGCGACAATAAA CGTGCT GTAC AGCACG TTGAATTACAAAGAC TERM 3078 3201933 - 3201920 - g 100 -9.5 -4.82901 | TGCGCTTGAGAAAAA CGGGG TTAC CCCCG AAAAAGGCGAAGTTC Patl_2639 3201444 - 3202481 + | zinc-binding alcohol dehydrogenase TERM 3079 3202493 - 3202525 + T 87 -12.8 -3.35996 | opp_overlap 3202500, overlap 3202500 ATAGTCGTTTACAAA CGCAAAACGCCCGA CGTTA TCGGGCGTTTTTTG TTATCACTAAGCCTG TERM 3080 3202518 - 3202500 - T 100 -12.4 -4.39571 | opp_overlap 3202493 3202500 TTTACAAACGCAAAA CGCCCGAC GTT ATCGGGCG TTTTTTGTTATCACT TERM 3081 3202500 - 3202518 + T 100 -11.7 -5.56673 | opp_overlap 3202500, overlap 3202493 TTTACAAACGCAAAA CGCCCGA CGTTA TCGGGCG TTTTTTGTTATCACT Patl_2640 3204984 - 3202543 - | agarase Patl_2641 3206251 - 3205055 - | gluconolactonase TERM 3082 3205568 - 3205550 - G 85 -12.4 -3.35775 | opp_overlap 3205549 3205548, overlap 3205548 AGGATCGGTGAAATA CAGCGTGC CCT GCACGCCG CCTTTACTGTTGCCC Patl_2642 3208634 - 3206286 - | agarase Patl_2643 3209317 - 3208631 - | KDPG and KHG aldolase TERM 3083 3209373 - 3209385 + r 70 -7.7 -3.75571 | overlap 3209371 TTCTGGCTTATTCCG CGCTT ATA AAGCG TATTTTGCTAAATTG Patl_2644 3210422 - 3209418 - | PfkB Patl_2645 3211819 - 3210419 - | major facilitator transporter Patl_2646 3212987 - 3211833 - | mandelate racemase/muconate lactonizing-like protein TERM 3084 3212276 - 3212256 - G 77 -11.1 -3.29144 | opp_overlap 3212252 CCATTTGCTCGAGAA CTCTTCGCC GAT GGCGAAGGG AACATCTACTAAGGT Patl_2647 3213679 - 3212984 - | GntR family transcriptional regulator TERM 3085 3213174 - 3213188 + g 89 -5 -5.63236 | AAATCACCATGCAAG GCTTGT AAA ATAAGC TTTTTGTTTTTCCAT Patl_2648 3213983 - 3214792 + | exodeoxyribonuclease III Patl_2649 3214807 - 3215463 + | hypothetical protein TERM 3086 3215514 - 3215541 + T 100 -18.6 -5.40474 | opp_overlap 3215514 GAGTCAGATAAAAAA GCGCCACTACAT AATA ATGTAGTGGCGC TTTTTTTAAGAACGT TERM 3087 3215541 - 3215514 - T 100 -18.6 -5.38047 | opp_overlap 3215514 GAGTCAGATAAAAAA GCGCCACTACAT AATA ATGTAGTGGCGC TTTTTTTAAGAACGT Patl_2650 3216254 - 3215580 - | ThiJ/PfpI TERM 3088 3216375 - 3216342 - H 91 -13.5 -2.59927 | opp_overlap 3216346, overlap 3216346 AATCCCGATAATTGA CAAATCATTATTGCA AATA TGCAATAATGATTTA TTTACAATGTATCTT TERM 3089 3216371 - 3216346 - H 91 -12.1 -4.00066 | opp_overlap 3216346, overlap 3216342 CCGATAATTGACAAA TCATTATTGCA AATA TGCAATAATGA TTTATTTACAATGTA TERM 3090 3216346 - 3216371 + H 95 -12.1 -4.45117 | opp_overlap 3216346 3216342 CCGATAATTGACAAA TCATTATTGCA AATA TGCAATAATGA TTTATTTACAATGTA TERM 3091 3216440 - 3216458 + G 72 -5.2 -4.56597 | opp_overlap 3216456 TCATCGAATTTGTAG CTGTGGCT GAA ACCCACGG TTTTTCAGCCGCCGC TERM 3092 3216572 - 3216599 + G 90 -10.6 -4.3534 | overlap 3216553 3216574 GTAGTACTCGAACGG TGCGCTTGACTG ATGC CGGTCAGGCGTA TTTTGCTCGTTGCCA TERM 3093 3216574 - 3216597 + G 86 -11 -3.77927 | overlap 3216553 3216572 AGTACTCGAACGGTG CGCTTGACTG ATGC CGGTCAGGCG TATTTTGCTCGTTGC Patl_2651 3216382 - 3217287 + | LysR family transcriptional regulator Patl_2652 3217891 - 3217631 - | hypothetical protein Patl_2653 3218230 - 3219186 + | transposase IS116/IS110/IS902 Patl_2654 3220060 - 3219218 - | hypothetical protein TERM 3094 3219281 - 3219291 + g 89 -4 -5.71712 | CCGACCTAACCCGGT CAAT TTG ATTG TTTTTTTATCTACAC TERM 3095 3219616 - 3219628 + g 72 -4.8 -4.61566 | ATAATTTTGCTTCGT CAGC AGAAA GCTG TTTTATAATTTCAAC TERM 3096 3219824 - 3219844 + g 74 -5.5 -4.58424 | overlap 3219826 TTGAAGCTTTTCTGC TACTTTGTT ATC AACAAAGTC TTTTATATGATCATA TERM 3097 3219826 - 3219842 + g 74 -8.1 -3.89814 | overlap 3219824 GAAGCTTTTCTGCTA CTTTGTT ATC AACAAAG TCTTTTATATGATCA TERM 3098 3220492 - 3220506 + r 75 -5.6 -4.82901 | opp_overlap 3220492 3220493, overlap 3220493 AGAACAATTTAATAA GGCGCA ACT TGCGCG TTTTTCTGCCGACGC TERM 3099 3220493 - 3220505 + r 74 -9.1 -3.49419 | opp_overlap 3220493 3220492, overlap 3220492 GAACAATTTAATAAG GCGCA ACT TGCGC GTTTTTCTGCCGACG TERM 3100 3220851 - 3220888 + r 100 -21.5 -3.57615 | opp_overlap 3220851 3220855 TTAAGACTTATTCAA TTAATGCTGGCACCCGC GTTA GCCGGTGCCAGCATTAA TTTGACCGCTGTTAG TERM 3101 3220888 - 3220851 - R 100 -21.5 -3.09987 | opp_overlap 3220851, overlap 3220855 TTAAGACTTATTCAA TTAATGCTGGCACCCGC GTTA GCCGGTGCCAGCATTAA TTTGACCGCTGTTAG TERM 3102 3220884 - 3220855 - R 100 -17.9 -3.3782 | opp_overlap 3220851, overlap 3220851 GACTTATTCAATTAA TGCTGGCACCCGC GTTA GCCGGTGCCAGCA TTAATTTGACCGCTG Patl_2655 3221400 - 3220900 - | glyoxalase/bleomycin resistance protein/dioxygenase Patl_2656 3221563 - 3222444 + | LysR family transcriptional regulator TERM 3103 3222445 - 3222420 - f 77 -6.3 -4.53602 | overlap 3222421 CGCACAGCAAATAAA GTTATTGCTTA AGCC TAAGCAATAAA TAACGCCTGATGTAT TERM 3104 3222444 - 3222421 - f 75 -9.8 -3.31438 | overlap 3222420 GCACAGCAAATAAAG TTATTGCTTA AGCC TAAGCAATAA ATAACGCCTGATGTA Patl_2657 3222537 - 3223808 + | endo-1,4-beta-xylanase TERM 3105 3223811 - 3223851 + T 76 -10.6 -2.54171 | gap 1, opp_overlap 3223817, overlap 3223810 3223808 3223806 AACTATTGACTGAAA TACAAACCGCCTCACATAT CGCC ATAGGTGAGGCGGTT-GCA GTCGTTTTTACGCCT TERM 3106 3223846 - 3223817 - T 100 -15.1 -4.35044 | opp_overlap 3223811 3223810 3223808 3223806 TGACTGAAATACAAA CCGCCTCACATAT CGCC ATAGGTGAGGCGG TTGCAGTCGTTTTTA Patl_2658 3237928 - 3223859 - | hypothetical protein TERM 3107 3225207 - 3225187 - G 76 -8.9 -3.68222 | CTGTAATGCTAACAA CCGCAGAGG CAT CCCCTTCGG CTACCGTCACAGGTA TERM 3108 3226632 - 3226612 - G 70 -8.9 -3.39327 | CCGTGATACTCACAA CCGCAGAGG CAT CCCCTTCGG CTACCGTCACAGGTA TERM 3109 3228782 - 3228821 + g 77 -10.6 -3.39365 | overlap 3228778 GTTATCGGGCGCGTC CACTGTCAGAGTGGGCGC TACC GTGTCCACACTGCCTGTG TCTGTTTCTGTGGTG TERM 3110 3229529 - 3229553 + g 70 -4.9 -4.386 | overlap 3229530 3229547 TACATTATCGCTGCC CGTCACGGTAA TAC TCACCGTGGCA TTTTCTGGCGCGTTG TERM 3111 3233159 - 3233183 + g 70 -4.9 -4.39002 | overlap 3233160 TACATTATTGCTGCC CGTCACAGTGA TAC TCACAGTGGCA TTTTCTGGCGCATTT TERM 3112 3237818 - 3237808 - G 80 -5.4 -4.91977 | overlap 3237810 CATCAAAAGATAAAA TGGT ATC ACCA ATACTGACAATTTCA Patl_2659 3238198 - 3239553 + | TolC family type I secretion outer membrane protein Patl_2660 3239780 - 3241843 + | ABC transporter related Patl_2661 3241840 - 3243261 + | HlyD family type I secretion membrane fusion protein Patl_2662 3245291 - 3243369 - | diguanylate cyclase/phosphodiesterase TERM 3113 3244736 - 3244720 - G 81 -8.1 -4.42788 | GGTAATGTCATAAAA CGTTTTT CAG AAAAACG ATGAGCCTGCTCAAC Patl_2663 3246084 - 3245323 - | hypothetical protein Patl_2664 3248218 - 3246230 - | GAF sensor hybrid histidine kinase Patl_2665 3250619 - 3248574 - | diguanylate cyclase/phosphodiesterase TERM 3114 3250269 - 3250279 + g 73 -4.6 -4.8048 | TTTAATGTTTTCTTT GCCT GAA GGGC TTTTTAATGTGGCGA Patl_2666 3251923 - 3250931 - | D-cysteine desulfhydrase TERM 3115 3251169 - 3251151 - G 83 -9.6 -4.08692 | opp_overlap 3251150 3251144, overlap 3251153 TAACCTTCGCCAAAA TAGTTGCC ATT GGCAACCA CTTTGCCTTTCGCCC TERM 3116 3251167 - 3251153 - G 75 -10 -3.63922 | opp_overlap 3251150 3251144, overlap 3251151 ACCTTCGCCAAAATA GTTGCC ATT GGCAAC CACTTTGCCTTTCGC Patl_2667 3252109 - 3253176 + | magnesium and cobalt transport protein CorA TERM 3117 3254601 - 3254613 + G 74 -3.3 -5.00616 | opp_overlap 3254601 TGTGTCAAGAGCAAG GCGAT TAG AGCGC TTTTTTACCCAGCCC Patl_2668 3253372 - 3254985 + | F0F1 ATP synthase subunit beta Patl_2669 3254975 - 3255364 + | F0F1 ATP synthase subunit epsilon Patl_2670 3255369 - 3255761 + | F0F1-ATPase subunit, putative TERM 3118 3255920 - 3255931 + F 93 -7.2 -5.49234 | overlap 3255916 TAGCGCGAATGGCAA CCGC CGTA GCGG TTTTTTATTGGGTCT Patl_2672 3256067 - 3256786 + | F0F1 ATP synthase subunit A Patl_2673 3256786 - 3257064 + | F0F1 ATP synthase subunit C Patl_2674 3257068 - 3257976 + | ATP synthase F0, B subunit Patl_2675 3258045 - 3259631 + | F0F1 ATP synthase subunit alpha Patl_2676 3259615 - 3260523 + | H+-transporting two-sector ATPase, gamma subunit Patl_2677 3260762 - 3261124 + | alkylhydroperoxidase TERM 3119 3261715 - 3261728 + G 89 -6.7 -5.4477 | TGTAGTGGCGGTAGG TGGCA TATT TGCCA TTTTTTTAGGGGTTT Patl_2678 3261566 - 3263113 + | diguanylate cyclase with GAF sensor Patl_2679 3264146 - 3263133 - | LacI family transcription regulator TERM 3120 3264024 - 3264036 + g 100 -9.1 -5.05153 | TTGGTACTGCATTTC GCGCA TAA TGCGC TTTATTTTTTCACGT Patl_2680 3265588 - 3264161 - | major facilitator transporter TERM 3121 3264271 - 3264253 - G 74 -11 -2.88375 | overlap 3264250 ATATAAAACACAGTA CTAACGGG CCT CCCGCTAG ACACACCCGCATCCA Patl_2681 3266611 - 3265604 - | LacI family transcription regulator Patl_2682 3267838 - 3266618 - | aldose 1-epimerase TERM 3122 3266998 - 3267010 + g 72 -4.8 -4.67982 | TCGTAAGTCGTCCAT GCAG GGTCG CTGC TTTTGTTAAATCGAA TERM 3123 3268054 - 3268032 - R 100 -12 -5.10497 | AATTCAGTGAAAAAA TCAGGGCCGA ACA CCAGCCCTGA TGAAAGACATTACCA Patl_2683 3269632 - 3268064 - | SSS family solute/sodium (Na+) symporter TERM 3124 3268507 - 3268517 + g 72 -5.4 -4.53036 | CCAAGCGCCCAATAT TCAC ATA GTGA TTTTCATCTTTGTCA TERM 3125 3269892 - 3269909 + r 85 -6.9 -5.09204 | opp_overlap 3269894, overlap 3269894 CAACCGATGTAAAAA AAGCCGC AAAA GCGGCTC TTTTTATTACGCTAT TERM 3126 3269894 - 3269907 + r 89 -9.5 -4.16909 | opp_overlap 3269894, overlap 3269892 ACCGATGTAAAAAAA GCCGC AAAA GCGGC TCTTTTTATTACGCT TERM 3127 3269907 - 3269894 - R 100 -9.5 -5.47821 | opp_overlap 3269892 3269894 ACCGATGTAAAAAAA GCCGC AAAA GCGGC TCTTTTTATTACGCT Patl_2684 3270702 - 3269938 - | hypothetical protein Patl_2685 3271371 - 3270772 - | twin-arginine translocation pathway signal TERM 3128 3271254 - 3271268 + g 72 -6.4 -4.25104 | opp_overlap 3271253 CATCTTTTGAGAACG CCGTTT CTT GAACGG TTTTCATCGGCAACG TERM 3129 3271336 - 3271315 - G 79 -8.7 -4.24342 | gap 1, opp_overlap 3271314, overlap 3271316 GTTCGCACTAACAAA CGCCG-TGCC TGT GGCAGCGGCA ATCATTTTAAGTAAT TERM 3130 3271335 - 3271316 - G 71 -10 -3.14284 | gap 1, opp_overlap 3271314, overlap 3271315 TTCGCACTAACAAAC GCCG-TGCC TGT GGCAGCGGC AATCATTTTAAGTAA Patl_2686 3273059 - 3271374 - | glucose-methanol-choline oxidoreductase Patl_2687 3274032 - 3273127 - | twin-arginine translocation pathway signal Patl_2688 3275245 - 3274025 - | nucleoside:H+ symporter Patl_2689 3276420 - 3275368 - | xylose isomerase-like TIM barrel TERM 3131 3275539 - 3275529 - G 71 -6.8 -4.13945 | ATTCCCATTCCAAAA TGGC CCA GCCA TCAAACCCATACTGG TERM 3132 3276448 - 3276468 + r 70 -9.7 -2.50338 | opp_overlap 3276453, overlap 3276447 3276445 3276452 AACTGGTGCGCTTGG GTAAACCGC CGA GCGGCTTAC GTGTTAATCACTTGT Patl_2690 3277762 - 3276575 - | oxidoreductase-like TERM 3133 3277478 - 3277448 - G 71 -7.6 -4.01493 | overlap 3277443 3277439 3277449 ACAAAATACATGAAA CCCAGCTTCAATCG CCG CGATTGAAATTGGC ACATGTAAATGATTA TERM 3134 3277477 - 3277449 - G 75 -11.1 -2.99269 | overlap 3277443 3277448 3277439 CAAAATACATGAAAC CCAGCTTCAATCG CCG CGATTGAAATTGG CACATGTAAATGATT TERM 3135 3278321 - 3278331 + G 72 -5.4 -4.45544 | overlap 3278311 AGCGGCCGCCCAGCG TGGT TAT ACCA TTTTACTTGCTAACA Patl_2691 3278058 - 3279065 + | LacI family transcription regulator TERM 3136 3279600 - 3279590 - g 82 -6.8 -4.84761 | overlap 3279592 AGACGTGTACAAAAA GCTC GCT GAGC GTTGCAACGTGATCG Patl_2692 3279114 - 3280016 + | twin-arginine translocation pathway signal TERM 3137 3280107 - 3280132 + T 100 -6.8 -5.5604 | opp_overlap 3280107 CAGTTTAATTAAAAA GTCGCACAGC CCGCAC GCTGAGTGAC TTTTTTATTGATTGA TERM 3138 3280132 - 3280107 - T 74 -4.6 -4.87291 | opp_overlap 3280107 CAGTTTAATTAAAAA GTCGCACAGC CCGCAC GCTGAGTGAC TTTTTTATTGATTGA Patl_2693 3280840 - 3280154 - | GntR family transcriptional regulator Patl_2694 3281367 - 3284204 + | TonB-dependent receptor TERM 3139 3284186 - 3284212 + F 72 -8.8 -3.48276 | overlap 3284188 3284189 AAGGTACAACATAGG TGTCAGTGCTAA ATT TTAGCGCTGGTA TTATATAAACAGAGG TERM 3140 3284188 - 3284210 + F 72 -9.2 -3.31726 | overlap 3284186 3284189 GGTACAACATAGGTG TCAGTGCTAA ATT TTAGCGCTGG TATTATATAAACAGA TERM 3141 3284189 - 3284209 + F 72 -10.5 -2.58822 | overlap 3284188 3284186 GTACAACATAGGTGT CAGTGCTAA ATT TTAGCGCTG GTATTATATAAACAG TERM 3142 3284243 - 3284224 - f 70 -7.8 -3.6393 | opp_overlap 3284224, overlap 3284222 GGTATTATATAAACA GAGGGCTA ATCA TCGCCCTC TTACATTGATTACAC Patl_2695 3284278 - 3285738 + | sulfatase TERM 3143 3285768 - 3285792 + T 100 -5 -5.87996 | opp_overlap 3285768 CAAGTTCCCGGTAAA GGTGGCGA AGCGGTTAA TCGTCACC TTTTTTTATTCGTTC Patl_2696 3286307 - 3285837 - | GCN5-related N-acetyltransferase TERM 3144 3286923 - 3286902 - g 74 -10.9 -2.80994 | opp_overlap 3286902 3286904, overlap 3286904 TGCAATGCCACTACA TACCGTGAC GATT GCCACGGTA TCGTTGGAAAAAAGC Patl_2697 3286684 - 3287847 + | hypothetical protein TERM 3145 3287954 - 3287970 + G 72 -2.9 -4.95155 | overlap 3287956 AGACTTCACACTTAA CGGGTTT ACC GAAACCG TTTTTATCGTCTCAG Patl_2698 3287847 - 3288890 + | glyoxalase/bleomycin resistance protein/dioxygenase Patl_2699 3288916 - 3289614 + | Crp/FNR family transcriptional regulator Patl_2700 3289752 - 3290318 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3146 3290360 - 3290386 + F 100 -10.3 -6.01187 | opp_overlap 3290359 3290360 3290362 TAAAATCTTACAAAG CAGCTAATAAC CCCTT GTTATTGGCTG TTTTTTTATTTCATT Patl_2701 3290570 - 3293038 + | TonB-dependent receptor, plug TERM 3147 3293142 - 3293169 + T 83 -12.8 -2.62078 | opp_overlap 3293147, overlap 3293147 GATGATCATAGACAG TAAAACGGAGCC CCTT GGCTCCGTTTTC GTATTGTGTGATTAA TERM 3148 3293147 - 3293164 + T 100 -12.7 -4.48263 | opp_overlap 3293147, overlap 3293142 TCATAGACAGTAAAA CGGAGCC CCTT GGCTCCG TTTTCGTATTGTGTG TERM 3149 3293164 - 3293147 - T 100 -12.7 -4.41353 | opp_overlap 3293142 3293147 TCATAGACAGTAAAA CGGAGCC CCTT GGCTCCG TTTTCGTATTGTGTG Patl_2702 3294563 - 3293181 - | alkaline phosphatase TERM 3150 3295466 - 3295442 - g 71 -7.1 -4.07008 | TATGAATCAAAAAGA GCAGCAATGGT TAA ACGATTGCAGC AAATGGCATCGGTGG Patl_2703 3294938 - 3295957 + | diguanylate cyclase Patl_2704 3297270 - 3296032 - | AFG1-like ATPase Patl_2705 3298319 - 3297402 - | alpha/beta hydrolase fold TERM 3151 3297716 - 3297727 + g 80 -5.8 -4.97158 | TGTCGATTTTATGTT CACC TGTT GGTG TTTTCTTTGATGTAC Patl_2706 3298855 - 3298418 - | hypothetical protein Patl_2707 3299350 - 3300297 + | 2-nitropropane dioxygenase, NPD TERM 3152 3300291 - 3300281 - T 93 -6.8 -5.49729 | overlap 3300268 3300282 AAGCAGCGAAAAAAA GGCT GCT AGCC CTATAGAACGCAGGG Patl_2708 3300648 - 3300337 - | ethyl tert-butyl ether degradation EthD Patl_2709 3301226 - 3300876 - | hypothetical protein Patl_2710 3302693 - 3301284 - | twin-arginine translocation pathway signal TERM 3153 3302733 - 3302768 + r 79 -10.6 -3.14132 | opp_overlap 3302723 3302737 3302744, overlap 3302737 3302744 CCAAATTGGTTTTAG CCAATAAAAAAGCGAG ATAA CTCGCTTTTTTATAAG TTGATAACGACGCGA TERM 3154 3302737 - 3302764 + r 93 -14.4 -2.56596 | opp_overlap 3302737 3302744, overlap 3302733 3302744 ATTGGTTTTAGCCAA TAAAAAAGCGAG ATAA CTCGCTTTTTTA TAAGTTGATAACGAC TERM 3155 3302764 - 3302737 - R 95 -14.4 -3.05463 | opp_overlap 3302733 3302737 3302744, overlap 3302744 ATTGGTTTTAGCCAA TAAAAAAGCGAG ATAA CTCGCTTTTTTA TAAGTTGATAACGAC TERM 3156 3302744 - 3302757 + r 91 -8.1 -5.31456 | opp_overlap 3302744 3302737, overlap 3302737 3302733 TTAGCCAATAAAAAA GCGAG ATAA CTCGC TTTTTTATAAGTTGA TERM 3157 3302757 - 3302744 - R 93 -8.1 -5.4833 | opp_overlap 3302737 3302733 3302744, overlap 3302737 TTAGCCAATAAAAAA GCGAG ATAA CTCGC TTTTTTATAAGTTGA Patl_2711 3305109 - 3302821 - | TonB-dependent receptor, plug TERM 3158 3303747 - 3303762 + g 77 -10.4 -3.39018 | overlap 3303745 CTTCGGTCGTAACTT CGTCGC TTGA GCGACG TATTTCAGCTGATAA TERM 3159 3305384 - 3305362 - R 100 -9.1 -5.61913 | opp_overlap 3305362 AATAAACATAAAAAA GGCGGGTTA GTTTA TCACCCGCC TTAATTGCTCTGTGT TERM 3160 3305362 - 3305384 + r 74 -9.1 -3.4493 | opp_overlap 3305362 AATAAACATAAAAAA GGCGGGTTA GTTTA TCACCCGCC TTAATTGCTCTGTGT Patl_2712 3306477 - 3305413 - | hypothetical protein Patl_2713 3307653 - 3306493 - | Alpha-methylacyl-CoA racemase Patl_2714 3308894 - 3307704 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 3161 3308391 - 3308379 - G 71 -7.7 -3.87075 | AGCACCTGTCATAAA GTCCA CCA TGGAC ACCCCAAAGCGTGTT TERM 3162 3308763 - 3308778 + g 72 -5.4 -4.44277 | gap 1, opp_overlap 3308762 3308761 TTGACGAGAAACATC CCCT-CC AAT GGCAGGG TTTTCAATTTTGATC TERM 3163 3308917 - 3308927 + r 70 -5.4 -4.32048 | TCCTTTTTTGCGCTT TACC CGC GGTA TTTTGACTGTTCTTA TERM 3164 3308983 - 3308952 - R 70 -8.1 -3.76224 | opp_overlap 3308951 TTCTTAGGTATGAAA CCACACTTAGTAA GTGCAT TGACTAAGCGTGG CTGTTGGCGTTAGAT Patl_2715 3310168 - 3308993 - | acyl-CoA dehydrogenase-like Patl_2716 3310703 - 3310185 - | MaoC-like dehydratase TERM 3165 3310314 - 3310332 + g 70 -8.8 -3.36131 | GATTCCAGCACCTGG GCGCGACT TAG ACTCGCGC TTGTCCAGTACTTTT TERM 3166 3310671 - 3310682 + g 79 -2.2 -5.55698 | overlap 3310660 GGTTTCGCGATAACG GTTG TCGC CGAC TTTTTTTACATTCTG Patl_2717 3311550 - 3310723 - | citrate lyase TERM 3167 3310759 - 3310793 + g 100 -13.7 -5.00196 | opp_overlap 3310780, overlap 3310761 GACTAACGCTAACGT TCGTTGACAGGCCAA AATAA TTGGCCTGTCGACCA TTTTATTGTTTACCA TERM 3168 3310761 - 3310791 + g 90 -16.3 -2.74335 | opp_overlap 3310780, overlap 3310759 CTAACGCTAACGTTC GTTGACAGGCCAA AATAA TTGGCCTGTCGAC CATTTTATTGTTTAC Patl_2718 3312443 - 3311547 - | polysaccharide deacetylase TERM 3169 3312018 - 3312031 + g 79 -4.5 -5.1101 | opp_overlap 3312007 CAACCAACCTAGAGG CCGCT TACC AGTGG TTTTTTCAATGCTGG TERM 3170 3312491 - 3312513 + r 73 -7.7 -3.93963 | overlap 3312489 CAGCGCGTTTATGGA CGTGCATCG TCTTT CTATGCACG TTTATCGCTAGTGAT Patl_2719 3313363 - 3312521 - | short-chain dehydrogenase/reductase SDR Patl_2720 3313680 - 3313372 - | hypothetical protein Patl_2721 3314195 - 3314007 - | addiction module antitoxin Patl_2722 3315020 - 3314568 - | hypothetical protein TERM 3171 3315498 - 3315512 + G 100 -8.6 -5.09426 | overlap 3315497 AAAGATATTTTTGTG GCCAAT GGC ATTGGC TTTTTTGAAATTGCA TERM 3172 3315810 - 3315828 + G 75 -11 -2.96274 | GCCATCATTCGCTCC CTGCGCGA GGG TCGCGTAG TCTGGTTCTCACCGG Patl_2723 3315264 - 3316163 + | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TERM 3173 3316196 - 3316226 + T 72 -9.7 -3.04144 | opp_overlap 3316202 TCACCATTCATCTTT AATTCAGCAGCCC ACTTG GGGCTGCTGAAGA TATTCAAACTGAAAG TERM 3174 3316220 - 3316202 - T 81 -11.7 -2.53263 | opp_overlap 3316196 TTCATCTTTAATTCA GCAGCCC ACTTG GGGCTGC TGAAGATATTCAAAC TERM 3175 3316848 - 3316836 - T 72 -3.3 -5.09221 | overlap 3316837 TATAATAAAAATAAA TTGCC GTG GGCAT ACTGGAGTTAATAGA Patl_2725 3319122 - 3316948 - | sulfatase TERM 3176 3317118 - 3317094 - G 82 -11.5 -3.53761 | overlap 3317095 TAATGGCTTGCGAAA CCTGCTGATGA AGG TCATCAGCAGT AAACAATAATGTGAT TERM 3177 3317117 - 3317095 - G 90 -15 -2.72043 | overlap 3317094 AATGGCTTGCGAAAC CTGCTGATGA AGG TCATCAGCAG TAAACAATAATGTGA Patl_2726 3319805 - 3320665 + | hypothetical protein Patl_2727 3321206 - 3320724 - | hypothetical protein TERM 3178 3321153 - 3321130 - G 72 -8.2 -3.73783 | gap 1, opp_overlap 3321129 TACGCAAGGTAAGAA GGCGA-GTCAC TGA GTGACGTCACC GCTGTTTGAGGTACT Patl_2728 3323257 - 3321371 - | hypothetical protein TERM 3179 3323642 - 3323679 + r 100 -14.3 -3.46705 | gap 1, opp_overlap 3323639, overlap 3323638 TACGCTAACAGAGGT GATTGCTCACAGGCATGG GCT TCA-GCCTGTGCGCAATC TTACATTTTTACATT Patl_2729 3324151 - 3323774 - | hypothetical protein Patl_2730 3325416 - 3324148 - | methyltransferase type 12 TERM 3180 3325241 - 3325255 + g 87 -10 -4.25848 | opp_overlap 3325240 3325239, overlap 3325252 GTTTGCGCGATAATG GCAGGT TTT ACCTGC TTTTCATAAGCGGTT TERM 3181 3325384 - 3325368 - G 73 -10.9 -2.55297 | overlap 3325367 3325365 CTACCGGAAACACAT CGTGCTT GGT AAGCACG TCCCACGAGGGTAAC Patl_2731 3326144 - 3325416 - | hypothetical protein Patl_2732 3326478 - 3327137 + | isochorismatase hydrolase TERM 3182 3328088 - 3328109 + G 70 -8.9 -3.36648 | ACGAATCAGGCACCA TTATGTGTA TTCC TACACATAA TTATCAGGTGTCTTG Patl_2733 3327340 - 3328353 + | polysaccharide deacetylase Patl_2734 3328353 - 3329276 + | polysaccharide deacetylase TERM 3183 3329400 - 3329360 - T 75 -9.8 -3.27298 | gap 1, opp_overlap 3329366, overlap 3329362 CTTTCGAACGATGAA GACTCTGCCCACGATATGT GATT ACACATCGTGGGCTTAG-C TTCCCATTTAAATTT TERM 3184 3329399 - 3329362 - T 93 -13.5 -3.20227 | opp_overlap 3329366, overlap 3329360 TTCGAACGATGAAGA CTCTGCCCACGATATGT GATT ACACATCGTGGGCTTAG CTTCCCATTTAAATT TERM 3185 3329366 - 3329395 + T 100 -15.1 -3.1996 | opp_overlap 3329362 3329360 AACGATGAAGACTCT GCCCACGATATGT GATT ACACATCGTGGGC TTAGCTTCCCATTTA Patl_2735 3329960 - 3329433 - | hypothetical protein Patl_2736 3330182 - 3330622 + | GCN5-related N-acetyltransferase Patl_2737 3330619 - 3330873 + | hypothetical protein TERM 3186 3330921 - 3330902 - T 82 -6.4 -5.00196 | GCGCAAATAATAAAA GGCTAGCC CTAA GACTAACC CTTGTACACTTCGCT Patl_2738 3332135 - 3331581 - | hypothetical protein Patl_2739 3332648 - 3332220 - | hypothetical protein TERM 3187 3333170 - 3333186 + G 71 -9.5 -3.18023 | overlap 3333169 CGCGTATTTTCATTC GGTGAAT ACA ATTCACC TGTTAGTCATAATCC Patl_2740 3332780 - 3333988 + | transposase, IS4 TERM 3188 3334003 - 3334033 + T 70 -3.3 -4.8384 | opp_overlap 3334020 AGGGGATCCCCCAGC GCC-CGCCTAACACG CAA TGTGTT-GGCATGGC TTTTTGCGTTGTTTG Patl_2741 3334400 - 3334101 - | hypothetical protein TERM 3189 3334154 - 3334172 + g 75 -3.2 -5.2197 | TATATCCGGCAGCAA CAGTATAT TGA ATATGTTG TTTTTCATTTTTGTA TERM 3190 3334446 - 3334494 + r 95 -11.8 -4.21974 | gap 2, overlap 3334481 AATACACCTAACGCC CGGCT-CT-GGGGCTGCATGGAGC GCA GCGTAATGCAGTCCCTAGCAGCCG TTTGTTAGGTGCTCC Patl_2742 3335096 - 3334527 - | hypothetical protein Patl_2743 3335974 - 3335138 - | hypothetical protein TERM 3191 3336533 - 3336549 + G 71 -9.5 -3.18023 | overlap 3336532 CGCGTATTTTCATTC GGTGAAT ACA ATTCACC TGTTAGTCATAATCC Patl_2744 3336143 - 3337351 + | transposase, IS4 Patl_2745 3337745 - 3337431 - | hypothetical protein Patl_2746 3338465 - 3337926 - | hypothetical protein Patl_2747 3339400 - 3338573 - | hypothetical protein Patl_2748 3340361 - 3339519 - | hypothetical protein TERM 3192 3340515 - 3340493 - g 89 -5.6 -5.66989 | TAAATATCAAAAAAA TGTTAGCGAA TCA TACACTAACA GATCTAAAAATGAAC Patl_2749 3340461 - 3340700 + | hypothetical protein TERM 3193 3340889 - 3340908 + T 91 -12.2 -3.9279 | opp_overlap 3340889 AAATCAATCAAAAAA GGTTAGCC CTAA GGCTAACC TTTCTACGCTTCGCT TERM 3194 3340908 - 3340889 - T 100 -12.2 -5.33921 | opp_overlap 3340889 AAATCAATCAAAAAA GGTTAGCC CTAA GGCTAACC TTTCTACGCTTCGCT Patl_2750 3341930 - 3340947 - | periplasmic protein, function unknown TERM 3195 3341524 - 3341535 + g 70 -2.2 -5.07275 | TCCCATGTATCCAGT GGCT GGCC AGTC TTTTTGTCTGTATAG TERM 3196 3341564 - 3341582 + g 79 -8.8 -4.05875 | opp_overlap 3341573, overlap 3341569 3341570 3341573 AGAGTAGAATTTCGC GCGTAACG AGG CGATACGC TTTGCCTTTTTTACC TERM 3197 3341573 - 3341588 + g 70 -2.5 -5.0133 | opp_overlap 3341573, overlap 3341564 3341570 3341569 TTTCGCGCGTAACGA GGCGA TACGCT TTGCC TTTTTTACCGCCATC Patl_2751 3342343 - 3341927 - | hypothetical protein Patl_2752 3343125 - 3342343 - | enoyl-CoA hydratase/isomerase TERM 3198 3343763 - 3343780 + G 77 -6.9 -4.386 | opp_overlap 3343762 3343763 CTGTGTACCCAAAAT CGCGATG CTAG CCTCGCG TTTTATGAGGCGTTA Patl_2753 3343247 - 3344143 + | hypothetical protein Patl_2754 3344716 - 3344270 - | hypothetical protein Patl_2755 3345699 - 3344890 - | hypothetical protein TERM 3199 3345753 - 3345737 - R 90 -8.7 -5.04987 | opp_overlap 3345737 AATAGCTGTAAAAAA GCCCTTA TAC CAAGGGC TTATCGTGTTTTAGT Patl_2756 3348014 - 3345789 - | TonB-dependent receptor, plug TERM 3200 3348387 - 3348405 + H 74 -9 -3.55444 | opp_overlap 3348386 ATTTAACCGACAACC TTATGACT TTT AGTCATAA TTTAACGAATGACAC TERM 3201 3348579 - 3348591 + H 74 -4.9 -4.77157 | CACCTAAAATGTTGA TTTAG TTA CTAAA TTTTTAATGGCTTGA Patl_2757 3348762 - 3350633 + | hypothetical protein TERM 3202 3351027 - 3351007 - g 70 -9.1 -3.43961 | opp_overlap 3351009, overlap 3351009 CTAGAAGATGCACAA TACTTGGTT GAC AACCAAGCA AGTGAATTTCTACTG TERM 3203 3351025 - 3351009 - g 71 -9.5 -3.28582 | opp_overlap 3351009, overlap 3351007 AGAAGATGCACAATA CTTGGTT GAC AACCAAG CAAGTGAATTTCTAC Patl_2758 3350683 - 3351270 + | PEP motif-containing protein TERM 3204 3351300 - 3351321 + T 100 -12.3 -5.58522 | opp_overlap 3351300 ATTACCCATAAAAAA CGGGAGCTG AAAT CAGTTCCCG TTTTTATTTTGTCTG TERM 3205 3351321 - 3351300 - T 100 -10.1 -5.28778 | opp_overlap 3351300 ATTACCCATAAAAAA CGGGAGCTG AAAT CAGTTCCCG TTTTTATTTTGTCTG Patl_2759 3352342 - 3351350 - | zinc-binding alcohol dehydrogenase Patl_2760 3353030 - 3352383 - | glutathione S-transferase-like TERM 3206 3353050 - 3353067 + r 76 -7 -4.45738 | TTCCCCCTTTTTTTT CACCGT GACACG ACGGTG TTTATTCTTCGAATG Patl_2761 3353690 - 3353124 - | carboxymuconolactone decarboxylase TERM 3207 3353563 - 3353553 - G 74 -5.4 -4.67904 | opp_overlap 3353553, overlap 3353544 CACTAACCCTAAAAA TGCT TTC AGCA TTTCAGGGCTTCGCG Patl_2762 3354751 - 3353762 - | pyruvate carboxyltransferase Patl_2763 3355078 - 3356277 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 3208 3356349 - 3356379 + T 95 -9.1 -5.52079 | gap 1, opp_overlap 3356343 AGCCCAGAACCGCAA GCCGCA-GTTACTG AATA TGGTAACCTGCGGC TTTTTATTTTCATCT TERM 3209 3356428 - 3356416 - T 73 -7.7 -3.90112 | opp_overlap 3356414 GTTTGCGCAATCAAA GCATC GCG GATGC TCTACATTGTGGGCA TERM 3210 3356508 - 3356469 - T 91 -11.1 -4.53636 | gap 2, opp_overlap 3356479, overlap 3356470 3356479 AGCACACAATTAAAA GCACA--AAAAACAGAGCT ATTT AGCTCTGTTTTTAATGTGC TACTGAGGAGTCACG TERM 3211 3356505 - 3356470 - T 87 -12.8 -3.31097 | opp_overlap 3356479, overlap 3356469 3356479 GCACACAATTAAAAG CACAAAAAACAGAGCT ATTT AGCTCTGTTTTTAATG TGCTACTGAGGAGTC TERM 3212 3356479 - 3356496 + T 93 -9.9 -4.82667 | opp_overlap 3356479 3356470 3356469 TAAAAGCACAAAAAA CAGAGCT ATTT AGCTCTG TTTTTAATGTGCTAC TERM 3213 3356496 - 3356479 - T 100 -9.9 -5.4588 | opp_overlap 3356479, overlap 3356470 3356469 TAAAAGCACAAAAAA CAGAGCT ATTT AGCTCTG TTTTTAATGTGCTAC Patl_2764 3357216 - 3356551 - | 3-isopropylmalate dehydratase, small subunit TERM 3214 3356988 - 3357010 + g 75 -2.6 -5.1167 | overlap 3356990 CGCAACCGAAATTAT CCCCAGCG AGTAAAA TGCTGGTG TTTTTATATTGCATT Patl_2765 3358619 - 3357216 - | isopropylmalate isomerase large subunit TERM 3215 3357851 - 3357902 + g 80 -7.2 -4.72272 | overlap 3357869 ATGTGACCGCTTGCT GCCATAACTCACCTTTGGGGGCGT ACTC ACGCCCTTTGAGGTAGGTAATCGC TTTTTCATCAGGGGC TERM 3216 3357869 - 3357884 + g 79 -10.4 -3.61356 | overlap 3357851 ATAACTCACCTTTGG GGGCGT ACTC ACGCCC TTTGAGGTAGGTAAT Patl_2766 3359562 - 3358624 - | alpha/beta hydrolase fold Patl_2767 3361153 - 3359567 - | FAD linked oxidase-like Patl_2768 3361380 - 3362153 + | GntR family transcriptional regulator TERM 3217 3362254 - 3362208 - T 73 -10.3 -2.80056 | opp_overlap 3362223 3362250, overlap 3362223 AGCACGCACTTAAAT GCCGCCCATAAAAAACGCCAC TTCAC GTGGCGTTTTTTATATAAAGC GAATCGCTTATTCTC TERM 3218 3362239 - 3362223 - T 100 -9.4 -5.24129 | opp_overlap 3362223, overlap 3362208 GCCGCCCATAAAAAA CGCCAC TTCAC GTGGCG TTTTTTATATAAAGC TERM 3219 3362223 - 3362239 + T 100 -9.4 -5.36441 | opp_overlap 3362223 3362208 GCCGCCCATAAAAAA CGCCAC TTCAC GTGGCG TTTTTTATATAAAGC Patl_2769 3362994 - 3362305 - | hypothetical protein Patl_2770 3364372 - 3363671 - | GCN5-related N-acetyltransferase TERM 3220 3363901 - 3363915 + g 88 -8.6 -4.79352 | opp_overlap 3363901 CGGTGTGATAAGTGA TTGCAG TGC CTGCAA TTTTATTATCAATGA TERM 3221 3364323 - 3364337 + g 70 -2.2 -4.98522 | opp_overlap 3364324, overlap 3364324 GCCTGCCAATAAAGA TTTAAA TTG TTTAAG TTTTTATCTAGGGTT Patl_2771 3364801 - 3364376 - | hypothetical protein Patl_2772 3365520 - 3364846 - | nitroreductase TERM 3222 3364976 - 3364942 - G 78 -12.3 -2.5294 | opp_overlap 3364940, overlap 3364941 3364939 CACTGGGCATAACAC CGCTGCACTTAAACC TTTTT GGTTTAATTGCAGCA CCTCGTTAATGCCAT Patl_2773 3366213 - 3365617 - | cyclic nucleotide-binding protein Patl_2774 3366731 - 3366468 - | hypothetical protein TERM 3223 3367497 - 3367542 + r 100 -20.7 -3.66429 | opp_overlap 3367500 3367507, overlap 3367500 3367507 AAAATAGATAGGATA TAACGAGAAAGCGGCTCACTT GTAT AAGTGATCCGCTTTCTCGTGA TTATTAAAGATTGTT TERM 3224 3367500 - 3367539 + r 100 -22.4 -2.93817 | opp_overlap 3367500 3367507, overlap 3367497 3367507 ATAGATAGGATATAA CGAGAAAGCGGCTCACTT GTAT AAGTGATCCGCTTTCTCG TGATTATTAAAGATT TERM 3225 3367539 - 3367500 - R 100 -22.4 -3.5951 | opp_overlap 3367500 3367497 3367507, overlap 3367507 ATAGATAGGATATAA CGAGAAAGCGGCTCACTT GTAT AAGTGATCCGCTTTCTCG TGATTATTAAAGATT TERM 3226 3367532 - 3367507 - R 91 -11.9 -4.12397 | opp_overlap 3367500 3367497 3367507, overlap 3367500 GGATATAACGAGAAA GCGGCTCACTT GTAT AAGTGATCCGC TTTCTCGTGATTATT TERM 3227 3367507 - 3367532 + r 91 -11.9 -4.03696 | opp_overlap 3367507 3367500, overlap 3367500 3367497 GGATATAACGAGAAA GCGGCTCACTT GTAT AAGTGATCCGC TTTCTCGTGATTATT Patl_2775 3368836 - 3367607 - | hypothetical protein Patl_2776 3369555 - 3368833 - | ABC transporter related Patl_2777 3371024 - 3369555 - | RND family efflux transporter MFP subunit TERM 3228 3370642 - 3370655 + g 72 -3.1 -5.00616 | gap 1, overlap 3370625 3370625 CGCTGGGCCAAGGTG GCCTCA GTC TG-GGC TTTTTTAAGCGCCGC TERM 3229 3371226 - 3371211 - R 100 -6.8 -5.81412 | opp_overlap 3371211 GTCACCCAAAAAAAA CGCCAC TCAT GTGACG TTTTAGTATACGAAG Patl_2778 3372299 - 3371259 - | succinylglutamate desuccinylase/aspartoacylase Patl_2779 3373210 - 3372302 - | alpha-L-glutamate ligase TERM 3230 3373646 - 3373622 - g 72 -9.3 -3.52668 | overlap 3373625 AATTCAGCCACACAA CAAGCGCCTAT TAT ACAGGCGGTTG AGGAAAACCCGTTCA TERM 3231 3374241 - 3374213 - g 75 -3.1 -5.27206 | overlap 3374214 CAGATAGAACAAAAA TTGCGCCACAAAC GTC GTTTGTTACACAC CACACTTTTTAACCC Patl_2780 3373364 - 3374272 + | hypothetical protein Patl_2781 3375893 - 3374277 - | glucose-methanol-choline oxidoreductase TERM 3232 3376408 - 3376391 - g 85 -6.9 -4.92239 | opp_overlap 3376391, overlap 3376401 CCAAAAACGCAAAAA GGTGACG TAAT CGACACC TACTTCGGCAAGCAA TERM 3233 3378220 - 3378204 - g 73 -10.9 -2.56747 | opp_overlap 3378204, overlap 3378203 3378201 CACTGATTACAACAG GCGATCA TGA TGATCGC GTCGTGCCCGCTCAT Patl_2782 3376235 - 3378409 + | prolyl oligopeptidase TERM 3234 3378460 - 3378488 + T 95 -11.2 -5.1523 | gap 1, opp_overlap 3378460 ACTAACAGTCACAAA GCCAAAACATGCT ACTG AGC-TGTTTTGGC TTTTTCTATTATGAC TERM 3235 3378488 - 3378460 - T 90 -11.2 -3.98172 | gap 1, opp_overlap 3378460 ACTAACAGTCACAAA GCCAAAACATGCT ACTG AGC-TGTTTTGGC TTTTTCTATTATGAC Patl_2783 3378839 - 3378504 - | hypothetical protein Patl_2784 3379058 - 3379660 + | hypothetical protein Patl_2785 3380629 - 3379691 - | auxin efflux carrier TERM 3236 3379733 - 3379721 - G 74 -3.3 -5.07486 | CAGGTGCAATAAAAA CAACC CAA GGGTG GTGGTAAACATCGAG TERM 3237 3382798 - 3382784 - g 70 -2.1 -5.07486 | GATTTTGAACAAAAA GCGTT GGCTA AACAC GGCATCGATTATGCG Patl_2786 3380954 - 3383092 + | peptidyl-dipeptidase Dcp TERM 3238 3383209 - 3383171 - T 100 -14.1 -5.71638 | gap 1, opp_overlap 3383176 GAACAATGAAAAAAA TAAAAGCCCCGTGA-TGA AGCA TCAATCACGGGGCTTTTT ATTGCAGTTCTGAAG TERM 3239 3383176 - 3383204 + T 100 -14 -5.10208 | gap 1, opp_overlap 3383171 ATGAAAAAAATAAAA GCCCCGTGA-TGA AGCA TCAATCACGGGGC TTTTTATTGCAGTTC Patl_2787 3384610 - 3383276 - | amidohydrolase TERM 3240 3383378 - 3383393 + g 78 -4.7 -4.96468 | opp_overlap 3383378, overlap 3383390 TGGGCTGTGTAATGA TGGCA AAGACG TGCCA TTTTCTTTGGCTTTG Patl_2788 3384872 - 3385750 + | LysR family transcriptional regulator Patl_2789 3385938 - 3386939 + | hypothetical protein Patl_2790 3387027 - 3388052 + | mandelate racemase/muconate lactonizing-like protein TERM 3241 3388070 - 3388094 + T 88 -8.4 -4.74132 | opp_overlap 3388070 TGGTTTCACTAAAAA GCCGGCCCCG TTAAT CGGTTCCGGC TTTTTCATAACGTAT TERM 3242 3388094 - 3388070 - T 88 -8.4 -4.72272 | opp_overlap 3388070 TGGTTTCACTAAAAA GCCGGCCCCG TTAAT CGGTTCCGGC TTTTTCATAACGTAT Patl_2791 3389250 - 3388132 - | hypothetical protein TERM 3243 3389381 - 3389364 - R 100 -12.7 -6.02914 | TTTACACAAAAAAAA GCCGACC ATAA GGTCGGC AAAGGGTGCAGCGTT Patl_2792 3391422 - 3389497 - | glucosyltransferase MdoH TERM 3244 3390226 - 3390214 - G 81 -3.3 -5.27477 | opp_overlap 3390225 ATTGGAAGCAAAAAA CACCG TTT CTGTG GTCGCGCGTACGACG TERM 3245 3390876 - 3390895 + g 71 -3.6 -4.77567 | opp_overlap 3390878 AAAAATCGGCCAAGT TACCCA CTTTACGA TGGGTA TTTTGTTCTCGGCGT mdoG 3393106 - 3391466 - | glucan biosynthesis protein G TERM 3246 3394063 - 3394047 - R 100 -10.1 -5.47159 | opp_overlap 3394045 3394047 TGGCAACATAAAAAA GCCGCAA AAA CTGCGGC TATTTAAAATCATAT TERM 3247 3394047 - 3394063 + r 75 -9.4 -3.39286 | opp_overlap 3394047, overlap 3394045 TGGCAACATAAAAAA GCCGCA AAAAC TGCGGC TATTTAAAATCATAT Patl_2794 3394822 - 3394112 - | fatty acid metabolism regulator TERM 3248 3395458 - 3395446 - g 73 -4.1 -4.81249 | GCTTAAACTTAAAAA CAAGA TTG CCTTG TCGATGTCGTTTGTT TERM 3249 3395474 - 3395484 + G 73 -2.4 -5.25803 | TCGATGTCGTTTGTT GCAG CAT CCGC TTTTTTGTCAGCCTT nhaB 3395069 - 3396649 + | sodium/proton antiporter TERM 3250 3396688 - 3396669 - f 90 -10.7 -4.15044 | opp_overlap 3396669 GTTTTGTTTAATAAA GCACCGC TGGATT GCGGTGC TTTTTTGTTTTAGTT TERM 3251 3396669 - 3396688 + F 100 -10.7 -5.85244 | opp_overlap 3396669 GTTTTGTTTAATAAA GCACCGC TGGATT GCGGTGC TTTTTTGTTTTAGTT Patl_2796 3396731 - 3397246 + | disulphide bond formation protein DsbB TERM 3252 3397292 - 3397305 + F 100 -8.1 -6.17184 | opp_overlap 3397292 GGTTTACATCAAAAA GGAGC TGCC GCTCC TTTTTTTTTGCTCCT TERM 3253 3397305 - 3397292 - f 84 -8.1 -4.8048 | opp_overlap 3397292 GGTTTACATCAAAAA GGAGC TGCC GCTCC TTTTTTTTTGCTCCT TERM 3254 3398471 - 3398481 + G 71 -6.8 -4.1552 | AGGTGGACCTTGCGA GCCT AGA AGGC TTTGTTCGGCAAATC TERM 3255 3398609 - 3398585 - g 74 -7.1 -4.2361 | overlap 3398577 3398587 AACATAAGCGCAAAA TACCCAGTGCA TTC TACACCGGGGA CACAGGCATTATCCC TERM 3256 3398607 - 3398587 - g 79 -9.7 -3.70689 | overlap 3398577 3398585 CATAAGCGCAAAATA CCCAGTGCA TTC TACACCGGG GACACAGGCATTATC TERM 3257 3398983 - 3398967 - g 79 -2.9 -5.38326 | overlap 3398968 TGAACTAAAGAAAAA CCATCGC TGG GCTATGA TGTGCAGCCAAGTAG Patl_2797 3397555 - 3399066 + | deoxyribodipyrimidine photolyase-related protein Patl_2798 3399736 - 3399242 - | hypothetical protein Patl_2799 3400115 - 3399729 - | hypothetical protein Patl_2800 3400859 - 3400200 - | fumarylacetoacetate (FAA) hydrolase TERM 3258 3400368 - 3400356 - G 71 -7.7 -3.86252 | TTCCACCAAAGACAA GATGC TAT GCATC ATGTGAGTGCTATTA Patl_2801 3401855 - 3400860 - | lytic murein transglycosylase Patl_2802 3402206 - 3401919 - | hypothetical protein Patl_2803 3403401 - 3402199 - | ribonuclease D TERM 3259 3403278 - 3403265 - G 76 -8.1 -4.03413 | AGTTGTGGATACAAA GTGCG TGTT CGCAC AAACTCTGTATCTAC TERM 3260 3403316 - 3403340 + g 77 -9.3 -3.89956 | overlap 3403317 GCTTGGGCTTTTGCC AGTTGAGCGCA GTA TGCGTTCAACG TTTCATCTGTGGTAA TERM 3261 3403317 - 3403339 + g 79 -12.8 -2.93492 | overlap 3403316 CTTGGGCTTTTGCCA GTTGAGCGCA GTA TGCGTTCAAC GTTTCATCTGTGGTA TERM 3262 3403409 - 3403394 - G 100 -8.2 -5.85425 | opp_overlap 3403393 3403394 CAAACAAATAAAAAA GCCAGC AAAA GCCGGC GTTTATCTACAAAAC Patl_2804 3405108 - 3403450 - | AMP-dependent synthetase and ligase Patl_2805 3406207 - 3405260 - | alpha/beta hydrolase fold Patl_2806 3406919 - 3406323 - | Slp family outer membrane lipoprotein TERM 3263 3406587 - 3406601 + g 75 -2.8 -5.24531 | opp_overlap 3406587 AAAATCACCGGTAAA GGTC ATGGTTC GACC TTTTTTGTACACCAT TERM 3264 3406811 - 3406827 + g 70 -5.2 -4.49556 | ACTTTGAAGCGGCTT CTTGAT AAGTA ATCAAG TTTGTTTCATCAGGC Patl_2807 3407428 - 3407117 - | hypothetical protein Patl_2808 3408364 - 3407660 - | peptidase M22, glycoprotease Patl_2809 3410484 - 3408361 - | helicase c2 TERM 3265 3409892 - 3409880 - G 74 -3.4 -5.0917 | overlap 3409882 TCAGCAAAAAACAAA TGGT GATTG ACCA CGACCAAATCAGCAT Patl_2810 3411970 - 3410618 - | alpha amylase, catalytic region TERM 3266 3410873 - 3410890 + g 79 -2.7 -5.40474 | gap 1 GCCCCACTGACCATT GTGCA-AG GCA CTGTGCGC TTTTTTTAGGGCGAT TERM 3267 3410984 - 3410970 - G 79 -2.8 -5.40072 | opp_overlap 3410980, overlap 3410971 TCGCGCTCAAAAAAA GCCAAA CGT TTTGGA TTACCAGCTTCTTGG TERM 3268 3411672 - 3411652 - G 70 -10.5 -2.51256 | overlap 3411651 ACATATCATCAAGAT CGCCAAACT CAG AGTTTAGCG CGAAGTAATCTTGCA Patl_2811 3413235 - 3412090 - | hypothetical protein Patl_2812 3413432 - 3414175 + | flagellar L-ring protein Patl_2813 3414176 - 3415366 + | hypothetical protein TERM 3269 3415347 - 3415360 + T 72 -9.5 -3.01924 | TGTTTGACCTCGTCA GCCCG CTTG CGGGC TATTAAGAGCAAGTC Patl_2814 3416004 - 3415819 - | SecC motif-containing protein Patl_2815 3416382 - 3417296 + | homocysteine S-methyltransferase Patl_2816 3417831 - 3417457 - | hypothetical protein Patl_2817 3418128 - 3418943 + | hypothetical protein TERM 3270 3419071 - 3419083 + F 74 -4.9 -4.80882 | CGTGGTGTAAATAGG TAAGT GAT ACTTA TTTTTGCTATCCGCT TERM 3271 3419141 - 3419163 + F 72 -9.9 -3.06796 | opp_overlap 3419140 3419137 3419147 ATTTTGAGAACCTAT GTGAAAGCG AACAC CGCTTTCGC TTAAATAACATAGGC TERM 3272 3420024 - 3420013 - g 78 -5.8 -4.88295 | opp_overlap 3420012 AAAGAAAGCTAAAAA TGCC GGTA GGCA ACTGTTAGTGTTGAT TERM 3273 3420191 - 3420167 - g 79 -2.9 -5.40072 | opp_overlap 3420145, overlap 3420170 TGTCGCTTAAAAAAA TTAGCCTTTGA TTA TCAAAAACAAA CCAATCTGCCTGCGT Patl_2818 3419195 - 3421357 + | periplasmic sensor hybrid histidine kinase TERM 3274 3421423 - 3421387 - T 90 -12.4 -3.73402 | gap 1, opp_overlap 3421377 3421376, overlap 3421388 ATACTGGCGATGAAA TTCGCCGTTTCCC-CGT ATGT ACGTGGGAAACGGCAAG CAAACCAGAGTTGTA TERM 3275 3421422 - 3421388 - T 100 -15.9 -2.8372 | gap 1, opp_overlap 3421377 3421376, overlap 3421387 TACTGGCGATGAAAT TCGCCGTTTCCC-CGT ATGT ACGTGGGAAACGGCAA GCAAACCAGAGTTGT Patl_2819 3422076 - 3421492 - | porin family outer membrane protein Patl_2820 3422370 - 3422870 + | hypothetical protein TERM 3276 3422917 - 3422948 + T 86 -4.6 -5.45726 | CTGGAGACCTTCACA GCTCGATTAA TACTTACTCACT TTAATCGAGC TTTTTTTAGCGTGTG Patl_2821 3423618 - 3423016 - | hypothetical protein Patl_2823 3425015 - 3424746 - | hypothetical protein TERM 3277 3425804 - 3425776 - R 93 -12.5 -3.79747 | opp_overlap 3425774 GGAGTTAGTAGCAAA GCGAGTTGTCAGT GAT AGTGACAACCCGC CCATTATTCTGCCGC Patl_2824 3426757 - 3425888 - | pseudouridine synthase, Rsu Patl_2825 3427509 - 3426757 - | putative transcriptional regulator Patl_2826 3428367 - 3427510 - | chromosome segregation and condensation protein ScpA TERM 3278 3428029 - 3428015 - G 72 -8.6 -3.79747 | opp_overlap 3427996, overlap 3428018 3428020 TTAGGCAGCAGTAAA CGAGAT TTT ATCTCG GCTAAAATCGCAGCC TERM 3279 3428283 - 3428317 + g 74 -8.7 -3.98826 | gap 2, opp_overlap 3428281 3428282 3428294 GTCCATTGATAAACG CCAAGGGCAAAGGCTGT TGT AC-GCCTT-GACCTTGG TTTGTCGCTTCCTGC TERM 3280 3428323 - 3428351 + g 90 -9.5 -4.4727 | TTGACCTTGGTTTGT CGCTTCCTGCTGC TGT GCAGTTTGAAGCG TTTTATCAATATTCA Patl_2827 3429005 - 3428385 - | Sua5/YciO/YrdC/YwlC family protein Patl_2828 3429904 - 3429038 - | PHP-like TERM 3281 3429597 - 3429611 + g 70 -4.9 -4.43307 | GACATTTTTTGTGCT CGGGC ATCTC GCTCG TTCTTTTGTTCAACC TERM 3282 3430261 - 3430229 - H 91 -12.9 -3.05463 | opp_overlap 3430237, overlap 3430232 3430237 3430249 ATTTGTGCGATTGAA CAAGAAAAGCCCGTA TAA TACGGGCTTTTTTTA TGCCCGATTGAAAAT TERM 3283 3430258 - 3430232 - H 90 -12.4 -3.67597 | opp_overlap 3430237, overlap 3430229 3430237 3430249 TGTGCGATTGAACAA GAAAAGCCCGTA TAA TACGGGCTTTTT TTATGCCCGATTGAA TERM 3284 3430253 - 3430237 - H 100 -12.3 -4.91084 | opp_overlap 3430237, overlap 3430232 3430229 3430249 GATTGAACAAGAAAA GCCCGTA TAA TACGGGC TTTTTTTATGCCCGA TERM 3285 3430237 - 3430253 + H 100 -12.3 -5.60993 | opp_overlap 3430237 3430232 3430229 3430249 GATTGAACAAGAAAA GCCCGTA TAA TACGGGC TTTTTTTATGCCCGA Patl_2829 3430347 - 3431981 + | anthranilate synthase component I Patl_2830 3431981 - 3432661 + | glutamine amidotransferase of anthranilate synthase TERM 3286 3432821 - 3432811 - g 76 -4.6 -4.91852 | overlap 3432812 GGCATTAAAAATAAA GGGC GAG ACCC CAGAAGAGATTGCTG Patl_2831 3432671 - 3433693 + | anthranilate phosphoribosyltransferase Patl_2832 3433704 - 3435110 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase Patl_2833 3435165 - 3436352 + | tryptophan synthase subunit beta TERM 3287 3437052 - 3437074 + G 75 -9.8 -3.57144 | opp_overlap 3437051 AGTCAAAGAAGCGAT TAGCGCAGGT GCA GCCGGCGCTA TTTCAGGCTCGGCAA Patl_2834 3436345 - 3437187 + | tryptophan synthase, alpha subunit TERM 3288 3437498 - 3437460 - g 100 -9.6 -4.83169 | AGGCGTGTACAAAAA CGTCACGGTAAAACCCTA CAT TAAGGTGCTGCCGTAACG CATTTAGGCTACAAC Patl_2835 3437197 - 3437496 + | YCII-related Patl_2836 3437619 - 3438032 + | class I peptide chain release factor Patl_2837 3438192 - 3439154 + | hypothetical protein TERM 3289 3439220 - 3439205 - f 80 -10.4 -3.65351 | opp_overlap 3439205 GCACTCTTATTTAAA GACGGC ATAC GCCGTC TTTTTTTATCGTTAA TERM 3290 3439205 - 3439220 + F 100 -10.4 -5.71983 | opp_overlap 3439205 GCACTCTTATTTAAA GACGGC ATAC GCCGTC TTTTTTTATCGTTAA TERM 3291 3439876 - 3439862 - g 74 -8.6 -3.90097 | AGGGGATAAAGAGAA TGCCAA TAG TTGGCA ACTAAAAGGTCAAAT TERM 3292 3441194 - 3441178 - g 72 -6.6 -4.28361 | opp_overlap 3441178, overlap 3441189 CTAATGCGACCAAAA TGCTAG ATAAA CTAGCA TTTCTAGGCAGAAAC Patl_2838 3439257 - 3442079 + | tetratricopeptide TPR_2 Patl_2839 3442258 - 3442533 + | peptidase Patl_2840 3442533 - 3443213 + | two component transcriptional regulator Patl_2841 3443217 - 3444554 + | periplasmic sensor signal transduction histidine kinase Patl_2842 3445726 - 3444617 - | MscS mechanosensitive ion channel Patl_2843 3446906 - 3446136 - | hypothetical protein Patl_2844 3449449 - 3447140 - | oxidoreductase alpha (molybdopterin) subunit TERM 3293 3448029 - 3448014 - G 76 -4.6 -5.00884 | opp_overlap 3448024, overlap 3448016 ATGGCCCTGAAAAAA TTGCCC CCAA GGGCGA ACAACACTTTTATAT Patl_2845 3450387 - 3449524 - | formate dehydrogenase, subunit FdhD TERM 3294 3449633 - 3449673 + g 100 -10.4 -4.83615 | opp_overlap 3449623 GCCAACGTGGACGGT GCCCCCATGGCTAGGATC ATACC GATATTTGCCATGGCGGC TTTTTGTACCAAGTC Patl_2846 3451727 - 3450720 - | hypothetical protein TERM 3295 3451172 - 3451155 - G 76 -4.1 -4.91977 | CAGCAAAATAGAAAA CACACCG AAGC CAATGTG TAACTTATCACCCTG Patl_2847 3451879 - 3452376 + | hypothetical protein TERM 3296 3452386 - 3452362 - T 100 -14.3 -3.98826 | opp_overlap 3452362 GTATTAAGCGACAAA TGGTGGCAAGC GTA GCTGGCCACCA TTTCACTTATGTCTC TERM 3297 3452362 - 3452386 + T 100 -14.3 -3.84394 | opp_overlap 3452362 GTATTAAGCGACAAA TGGTGGCAAGC GTA GCTGGCCACCA TTTCACTTATGTCTC Patl_2848 3453529 - 3452408 - | hypothetical protein TERM 3298 3453025 - 3453009 - G 70 -5.1 -4.42386 | opp_overlap 3453009 TGTTCACCCACAAAA TCGTCCA GCA CGAACGA TGTCATAAACAAGGG TERM 3299 3453172 - 3453158 - G 73 -2.1 -5.1861 | gap 1, opp_overlap 3453158 3453160 GTGATTATCAAAAAA GCTCAC GTCA GTG-GC TTTGTCCACATTCAC Patl_2849 3453686 - 3454642 + | beta-lactamase-like TERM 3300 3454686 - 3454700 + T 70 -5.7 -4.45068 | opp_overlap 3454679 GATACGAAGTACTAC GACTG AAGTA CAGTC TTTATTCTTAAGCAT TERM 3301 3454769 - 3454729 - T 91 -6.2 -5.37043 | opp_overlap 3454729, overlap 3454733 ATTTGATATAAAAAA GCCATCTCATTCAGTG AAATAAGAA CACGGAATGAGACCGC TTTTTGCTACTTTCT TERM 3302 3454729 - 3454769 + T 71 -4 -4.85267 | opp_overlap 3454729 3454733 ATTTGATATAAAAAA GCCATCTCATTCAGTG AAATAAGAA CACGGAATGAGACCGC TTTTTGCTACTTTCT Patl_2850 3455354 - 3454851 - | hypothetical protein TERM 3303 3455865 - 3455823 - R 100 -15.9 -3.68569 | opp_overlap 3455833, overlap 3455833 TTATTGATTGAATAA CACACAAAAATCCGGTAAA TAACC TTTACCGGATTTTTGCTTG ACGCATCTTAAATGC TERM 3304 3455855 - 3455833 - R 93 -10.7 -5.1383 | opp_overlap 3455833, overlap 3455823 AATAACACACAAAAA TCCGGTAAA TAACC TTTACCGGA TTTTTGCTTGACGCA TERM 3305 3455833 - 3455855 + r 93 -10.7 -4.8622 | opp_overlap 3455823 3455833 AATAACACACAAAAA TCCGGTAAA TAACC TTTACCGGA TTTTTGCTTGACGCA TERM 3306 3457150 - 3457136 - R 71 -4.2 -4.89562 | GCAAAACCAACAAAA CCAGCT GGA AGCTCG AACAAATCACCAGTA TERM 3307 3458530 - 3458520 - R 71 -6.8 -3.98113 | opp_overlap 3458520 TAACCAGTAATGAAA GTCG GAT CGAC TGCGTTAGAGCATTC Patl_2853 3460303 - 3459320 - | hypothetical protein TERM 3308 3459481 - 3459511 + g 70 -2.5 -5.08824 | gap 1, overlap 3459482 3459482 AGTTTGAGCGGCATA CT-GCTGGCGTGTT ACCA AGCTCGCCAGCCAC TTTTTTGACTGCCGC TERM 3309 3460052 - 3460040 - G 72 -9.1 -3.53343 | overlap 3460027 AAGCTCTTTGGCAAA GCGCA AAA TGCGC TCAAATTTCTGCTCG TERM 3310 3460461 - 3460505 + H 100 -23.2 -3.73072 | opp_overlap 3460462 3460468, overlap 3460462 CCTAGTCCTTGACAG AGTAGAACGTTCACTCTACC CTGAA GGTAGAGTGAACGTTCTACC TTTGATGCCGCACTT TERM 3311 3460504 - 3460462 - H 100 -27.4 -2.87564 | opp_overlap 3460462 3460461, overlap 3460468 CTAGTCCTTGACAGA GTAGAACGTTCACTCTACCC TGA AGGTAGAGTGAACGTTCTAC CTTTGATGCCGCACT TERM 3312 3460462 - 3460504 + H 100 -26.7 -2.83522 | opp_overlap 3460462 3460468, overlap 3460461 CTAGTCCTTGACAGA GTAGAACGTTCACTCTACC CTGAA GGTAGAGTGAACGTTCTAC CTTTGATGCCGCACT TERM 3313 3460498 - 3460468 - H 100 -19.2 -3.49777 | opp_overlap 3460462 3460461, overlap 3460462 CTTGACAGAGTAGAA CGTTCACTCTACCC TGA AGGTAGAGTGAACG TTCTACCTTTGATGC Patl_2854 3460510 - 3461055 + | TetR family transcriptional regulator Patl_2855 3461042 - 3462124 + | zinc-binding alcohol dehydrogenase Patl_2856 3463617 - 3462220 - | hypothetical protein TERM 3314 3462672 - 3462662 - G 71 -6.8 -4.08216 | CTACTTGGCTCAAAA TCGC GAT GCGA TACAGAATAAAAACT Patl_2857 3463850 - 3464353 + | GCN5-related N-acetyltransferase Patl_2858 3464503 - 3466470 + | hypothetical protein TERM 3315 3466669 - 3466652 - g 74 -5.5 -4.61633 | AGACATCTTTAAAAA CCATTGC TTGT GCACTGG CAGTTAATTTTAGCA TERM 3316 3466812 - 3466844 + G 90 -14.1 -3.30159 | opp_overlap 3466812 AGTATCGCCACCAAA CGAGCACATCACCGC ACA GCAGTGGTGGGCTCG TTATCAACCCGTTAG TERM 3317 3466844 - 3466812 - g 100 -14.1 -3.73953 | opp_overlap 3466812 AGTATCGCCACCAAA CGAGCACATCACCGC ACA GCAGTGGTGGGCTCG TTATCAACCCGTTAG TERM 3318 3466991 - 3467003 + G 73 -7.7 -4.07568 | opp_overlap 3466991 3466987 3466986 GCTTAGGAAATGGAA CTGCT GGC AGCAG TTTTGGCGCCAAGCA Patl_2859 3466633 - 3468618 + | Alpha-amylase TERM 3319 3468694 - 3468667 - T 70 -3.4 -4.86621 | gap 1, opp_overlap 3468669 3468672, overlap 3468669 3468670 AGGCTGAATTAAAAA CACGTGCGGGTAA ACT TTACCCGCT-GTT TTCCAGCGTCACGTC TERM 3320 3468669 - 3468692 + T 75 -8.2 -4.09685 | gap 1, opp_overlap 3468669 3468667 3468670, overlap 3468672 GCTGAATTAAAAACA CGTGCGGGTAA ACT TTACCCGC-TG TTTTCCAGCGTCACG TERM 3321 3468672 - 3468690 + T 95 -13.2 -3.64716 | opp_overlap 3468669 3468670 3468667, overlap 3468669 GAATTAAAAACACGT GCGGGTAA ACT TTACCCGC TGTTTTCCAGCGTCA Patl_2860 3469479 - 3468730 - | GntR family transcriptional regulator Patl_2861 3469829 - 3471916 + | glycoside hydrolase family protein Patl_2862 3471944 - 3472495 + | tripartite ATP-independent periplasmic transporter DctQ TERM 3322 3472535 - 3472556 + G 74 -8.7 -3.87062 | TTTCATTCTATTACT CACTGCTGG CACG CCAGTGGTG TTTGCCTTGTTAATT TERM 3323 3473431 - 3473413 - g 73 -7.4 -4.1822 | opp_overlap 3473429, overlap 3473429 TGTTAGCCGAACAAA TCGTCGGC ATA ACCGACAA CGTATTGTTGTTGCT Patl_2863 3472497 - 3473783 + | TRAP dicarboxylate transporter, DctM subunit TERM 3324 3474080 - 3474052 - g 70 -2.3 -4.91712 | overlap 3474054 GGTAACTTACAAAAA GGCGTGCTCGAAA TGT TTCCTACCACGGC AGGCGGCACAGGAAA Patl_2864 3473785 - 3474825 + | TRAP dicarboxylate transporter- DctP subunit Patl_2865 3475211 - 3477607 + | TonB-dependent receptor TERM 3325 3477650 - 3477668 + F 100 -13.1 -5.36441 | GTTAGTGTGTGTTTA GGGCGCC TTAGT GGCGCCC TTTTTTATGTCCGCG Patl_2866 3477914 - 3478255 + | hypothetical protein TERM 3326 3478290 - 3478308 + T 100 -7.4 -5.54885 | opp_overlap 3478290 TAAAAGCGAATGAAA GCGACG AACTTGC CGTCGC TTTTTTATTGCTGTT TERM 3327 3478308 - 3478290 - T 75 -8.1 -3.99779 | opp_overlap 3478290 TAAAAGCGAATGAAA GCGACGA ACTTG CCGTCGC TTTTTTATTGCTGTT Patl_2867 3479085 - 3478387 - | cation efflux protein Patl_2868 3479152 - 3479541 + | MerR family transcriptional regulator TERM 3328 3479583 - 3479566 - T 95 -9.1 -5.36441 | opp_overlap 3479565 TGCGCAGATAAAAAA GCCCTAC AAAT GCAGGGC CTAATGTACTTAGTA Patl_2869 3482723 - 3479649 - | acriflavin resistance protein TERM 3329 3479874 - 3479888 + g 79 -10 -3.81885 | CGCCTTATACGCATC CTTGCC TGT GGCAAG TTCTATGTTTATCTG Patl_2870 3483775 - 3482720 - | RND family efflux transporter MFP subunit Patl_2871 3484848 - 3483775 - | RND family efflux transporter MFP subunit Patl_2872 3485020 - 3485739 + | TetR family transcriptional regulator TERM 3330 3485793 - 3485776 - T 100 -11.3 -5.31456 | overlap 3485765 GTAAGGCATAAAAAA GCCTAGC AATG GCTAGGC TAACTCGATTGTACT Patl_2873 3486213 - 3485818 - | hypothetical protein Patl_2874 3487589 - 3486216 - | twin-arginine translocation pathway signal Patl_2875 3488607 - 3487612 - | hypothetical protein TERM 3331 3488475 - 3488462 - G 72 -3.1 -5.08824 | overlap 3488466 CCTTGATGCAAAAAA GACAT GGCG ATGCC TAACAATAAGGCAAA Patl_2876 3489663 - 3488674 - | SyrP protein, putative TERM 3332 3488719 - 3488747 + g 73 -10.3 -2.9675 | overlap 3488713 ACGCTTGCGCTCACC TGAGTACGAACGG CGT CCGTGCATACTCA TGTAGTTATCAACTA TERM 3333 3489208 - 3489182 - G 73 -10.8 -3.10344 | TCTGCAGCTAATACA GGTTGCTGCGCT TTT AGCGCCGCAAAC AACAGATCAGAGCGG Patl_2877 3490638 - 3489673 - | aldehyde reductase TERM 3334 3489813 - 3489836 + g 72 -5.3 -4.63527 | AAATGGCTAAGTTTT CCACTAAAC GCTCAG GTTTAGAGG TTTTTGGAATGATCG TERM 3335 3490719 - 3490698 - R 70 -8.9 -3.11178 | opp_overlap 3490701 TAATTAAGTCTAATA TTATGTCTT ATAT AAGACATAA GTTAAGGCACTGCTT Patl_2878 3491376 - 3490924 - | hypothetical protein Patl_2879 3491724 - 3491380 - | hypothetical protein TERM 3336 3492024 - 3491999 - H 74 -6.2 -4.4009 | opp_overlap 3492000, overlap 3492000 TTTTACGTGACAAAA CCTGTTGCAA TCCCCT TTGCAACAGT CTTACAACGCTCTTA TERM 3337 3492000 - 3492023 + H 72 -9.7 -3.03007 | opp_overlap 3491999 3492000 TTTACGTGACAAAAC CTGTTGCAA TCCCCT TTGCAACAG TCTTACAACGCTCTT TERM 3338 3492023 - 3492000 - H 73 -9.7 -3.23733 | opp_overlap 3492000, overlap 3491999 TTTACGTGACAAAAC CTGTTGCAA TCCCCT TTGCAACAG TCTTACAACGCTCTT TERM 3339 3492247 - 3492270 + H 100 -14.6 -4.98531 | opp_overlap 3492246 3492243 GTAACGATTAACTAG CCCTCGGAAG GAAA CTTCCGGGGG TTTTTCATTTAAGGC TERM 3340 3492613 - 3492597 - g 86 -5.1 -5.56673 | AGCTAGAAGAAAAAA TGCTTGA GCG TCAGGCA TCAGGTAAAAAATTC hisG 3492356 - 3493255 + | ATP phosphoribosyltransferase Patl_2881 3493336 - 3494652 + | histidinol dehydrogenase Patl_2882 3494645 - 3495760 + | histidinol-phosphate aminotransferase Patl_2883 3495762 - 3496838 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase Patl_2884 3496838 - 3497467 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Patl_2885 3497476 - 3498210 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 3341 3498945 - 3498924 - g 87 -10.1 -4.30576 | TGGGCATGATTAAAA GCGGTGGCA ACTA TGCCAGCGC CCTAGGCCCGATTTC Patl_2886 3498398 - 3499396 + | branched-chain amino acid aminotransferase TERM 3342 3499409 - 3499431 + F 75 -9.9 -3.30213 | opp_overlap 3499409, overlap 3499407 3499404 TAATCCCTATTAGAA CGCCTGCTT GCATA AAGTAGGCG TCTGTTGTTCGTATA Patl_2887 3499473 - 3500246 + | imidazole glycerol phosphate synthase subunit HisF Patl_2888 3500308 - 3500928 + | phosphoribosyl-ATP pyrophosphohydrolase TERM 3343 3500924 - 3500912 - f 75 -5.5 -4.81083 | overlap 3500913 TCGAAGTACTAAAAA CTCGC CAC GCGAA ATAGTTATTTTACTA Patl_2889 3501258 - 3501809 + | cytochrome B561 Patl_2890 3501812 - 3502381 + | hypothetical protein TERM 3344 3502409 - 3502426 + F 100 -12.7 -5.64304 | opp_overlap 3502407 CTTTTACAAATCATG GCCCGCT TATT AGCGGGC TTTTTTGTTATATTC Patl_2891 3502701 - 3503165 + | heat shock protein Hsp20 TERM 3345 3503203 - 3503221 + T 100 -12.4 -5.66684 | opp_overlap 3503203 CCCTGTGAATCAAAA CGGCGCTT AGT GAGCGCCG TTTTTTTATGCCTTG TERM 3346 3503221 - 3503203 - T 95 -11.7 -4.4078 | opp_overlap 3503203 CCCTGTGAATCAAAA CGGCGCT TAGTG AGCGCCG TTTTTTTATGCCTTG Patl_2892 3503670 - 3503281 - | uncharacterized relative of glutathione S-transferase TERM 3347 3503756 - 3503771 + r 89 -9 -4.81083 | opp_overlap 3503756 ATAGACATAAAAAAA CCCACT TTTC AGTGGG TTTTTCATCATTCAA TERM 3348 3503771 - 3503756 - R 100 -9 -5.77988 | opp_overlap 3503756 ATAGACATAAAAAAA CCCACT TTTC AGTGGG TTTTTCATCATTCAA Patl_2893 3504445 - 3503801 - | adenylate kinases TERM 3349 3504610 - 3504581 - R 91 -13.1 -3.15861 | opp_overlap 3504588 3504609, overlap 3504588 AATGCATAATATACA CAAAAAATGGGCT AAAG AGCCCATTTTTTA ACGTTATGTTGAGTA TERM 3350 3504603 - 3504588 - R 95 -9 -5.46276 | opp_overlap 3504588, overlap 3504581 AATATACACAAAAAA TGGGCT AAAG AGCCCA TTTTTTAACGTTATG TERM 3351 3504588 - 3504603 + r 90 -9 -5.11033 | opp_overlap 3504581 3504588 AATATACACAAAAAA TGGGCT AAAG AGCCCA TTTTTTAACGTTATG Patl_2894 3506556 - 3504634 - | heat shock protein 90 Patl_2895 3507315 - 3506713 - | recombination protein RecR TERM 3352 3507235 - 3507245 + g 76 -8.2 -4.07568 | opp_overlap 3507229, overlap 3507229 CAAATGAAACGCCAT GCGC TGG GCGC TTTTCGGGCCCACAC Patl_2896 3507653 - 3507354 - | hypothetical protein Patl_2897 3510455 - 3507711 - | DNA polymerase III, subunits gamma and tau TERM 3353 3508063 - 3508088 + g 71 -9.7 -3.25906 | opp_overlap 3508062, overlap 3508061 3508083 ATCTGTGTTATCAAC GCGCTCCATTT ATCC AATTGGGGCGC TATTGTGACCTTCTC TERM 3354 3509766 - 3509786 + g 71 -9.7 -3.16683 | opp_overlap 3509759 3509758 GCTCAAACTGACGTT GCCATTGCC TTG GGCAATAGC TTGATCGGATAAACT TERM 3355 3509842 - 3509862 + g 95 -12.6 -4.21098 | GCAGCTCTTGCTATT TGCGCCAG CGCTT CTGGCGCA TTTTGAAGTTGCTCT TERM 3356 3510069 - 3510092 + g 71 -6.8 -4.03234 | opp_overlap 3510068 3510069 3510088 ATGCTTAGACAACAT GTGTACTTCA TCAA TTAAGTACAC TTTGTATCGACCACG Patl_2898 3511001 - 3510465 - | adenine phosphoribosyltransferase TERM 3357 3510954 - 3510941 - G 83 -6.7 -4.93877 | CGTCACGAAATAAAA TCCCA GGCT TGGGA TAATCAGGTACGGTT Patl_2899 3511991 - 3511242 - | hypothetical protein TERM 3358 3511795 - 3511785 - G 82 -5.4 -5.14563 | opp_overlap 3511765 GTGCTCAGCAAAAAA TTGC CGA GCAA GGCTGTTCCATTGCG Patl_2900 3512840 - 3511992 - | hypothetical protein TERM 3359 3512933 - 3512909 - R 100 -17.3 -3.90922 | opp_overlap 3512913, overlap 3512913 ACGTCGCCTAAACAA TAAAGGCCAGC AAA GCTGGCCTTTA TTCAGAAAATTCTAG TERM 3360 3512929 - 3512913 - R 100 -13.7 -4.56978 | opp_overlap 3512913, overlap 3512909 CGCCTAAACAATAAA GGCCAGC AAA GCTGGCC TTTATTCAGAAAATT TERM 3361 3512913 - 3512929 + r 100 -13.7 -4.15788 | opp_overlap 3512909 3512913 CGCCTAAACAATAAA GGCCAGC AAA GCTGGCC TTTATTCAGAAAATT Patl_2901 3513429 - 3512956 - | hypothetical protein Patl_2902 3515207 - 3513966 - | beta-lactamase TERM 3362 3514607 - 3514617 + g 78 -5.4 -4.81083 | opp_overlap 3514607 GAACGCCAGAATTCA TGTG CAG CACA TTTTTAATGGTTACG anmK 3516873 - 3515668 - | anhydro-N-acetylmuramic acid kinase TERM 3363 3517135 - 3517148 + G 79 -4.5 -5.1925 | ACGCCCATCACGCTT GCAGT AACC GCTGC TTTTTTCAGTTGTGC TERM 3364 3517449 - 3517467 + G 87 -10.3 -4.08887 | CCTAGTATTGATTGA TGGCACG CGCGC CGTGCCA TTTAGTTTCCGTAAT TERM 3365 3517829 - 3517852 + G 74 -10.4 -3.14132 | gap 1, opp_overlap 3517806 3517837 GTTACTATACCGACG TGGCAACAGGC AAT GCCT-TTGCCA TTGGTGGAGGCGGAA Patl_2904 3517075 - 3519819 + | TonB-dependent receptor TERM 3366 3519896 - 3519913 + F 100 -12.7 -5.26316 | opp_overlap 3519895 3519892 GGTAAATTCAATCAG GCCCTGC ATTA GCAGGGC TTTTTTATCAGCTCA Patl_2905 3520112 - 3520435 + | hypothetical protein Patl_2906 3521351 - 3521010 - | hypothetical protein TERM 3367 3521365 - 3521378 + r 71 -9.5 -2.89569 | overlap 3521362 ATTTAGCGCTCCCTA GGCGG TGGG CCGCC TGCTTCGTTTGGCGC Patl_2907 3522431 - 3521352 - | hypothetical protein Patl_2908 3522801 - 3523823 + | cobalamin synthesis protein, P47K Patl_2909 3525363 - 3524245 - | hypothetical protein folX 3525557 - 3525922 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase Patl_2911 3525940 - 3526833 + | hypothetical protein TERM 3368 3526922 - 3526885 - T 70 -8.7 -3.37257 | opp_overlap 3526890, overlap 3526890 AGATAAGTAAACACA GAAAAGCCGATAAAT TAATTACG ATTTATCGGCTTTTT ACTTTTGGCTTTTAT TERM 3369 3526917 - 3526890 - T 88 -8.6 -4.74917 | opp_overlap 3526890, overlap 3526885 AGTAAACACAGAAAA GCCGATAAAT TAATTACG ATTTATCGGC TTTTTACTTTTGGCT TERM 3370 3526890 - 3526917 + T 90 -9.3 -5.10154 | opp_overlap 3526890 3526885 AGTAAACACAGAAAA GCCGATAAATT AATTAC GATTTATCGGC TTTTTACTTTTGGCT Patl_2912 3529501 - 3526973 - | hypothetical protein Patl_2913 3530230 - 3529505 - | ABC transporter related Patl_2914 3530247 - 3530885 + | arylesterase TERM 3371 3531107 - 3531089 - T 73 -8.8 -3.66784 | CCAGCGCCAAGACAA GAGGTCGA ACG TCGGCCTC CCCCGCAAACTTCAC TERM 3372 3531301 - 3531278 - T 80 -11.2 -2.78672 | opp_overlap 3531278, overlap 3531275 3531273 3531297 GCTAAAGATAGATGA GCCAAATTAT TATT ATAATTTGGC TTTTGCCTATACAGC TERM 3373 3531278 - 3531301 + T 93 -11.2 -4.2349 | opp_overlap 3531275 3531273 3531278 3531297 GCTAAAGATAGATGA GCCAAATTAT TATT ATAATTTGGC TTTTGCCTATACAGC Patl_2915 3532264 - 3531332 - | dihydrouridine synthase, DuS Patl_2916 3532769 - 3533974 + | hypothetical protein Patl_2917 3533979 - 3534986 + | peptidase M48, Ste24p Patl_2918 3535431 - 3535033 - | hypothetical protein TERM 3374 3535547 - 3535576 + r 90 -12.3 -3.50393 | opp_overlap 3535552, overlap 3535552 CCATTTAAATAAAAA AAAAAGCCGTACA TCAC TGTACGGCTTTTC TTATATGGCGTCCCC TERM 3375 3535571 - 3535552 - R 100 -12.2 -6.67286 | opp_overlap 3535552 3535547 TAAATAAAAAAAAAA GCCGTACA TCAC TGTACGGC TTTTCTTATATGGCG TERM 3376 3535552 - 3535571 + r 100 -12.2 -4.84311 | opp_overlap 3535552, overlap 3535547 TAAATAAAAAAAAAA GCCGTACA TCAC TGTACGGC TTTTCTTATATGGCG TERM 3377 3536329 - 3536352 + r 86 -10.4 -4.05033 | overlap 3536330 GGGACAGAAACTTTG TTCATCGAAG CAAG CTTCGATGAG TTTCTGTAAGGTGAG TERM 3378 3536330 - 3536351 + r 82 -11.7 -3.02698 | overlap 3536329 GGACAGAAACTTTGT TCATCGAAG CAAG CTTCGATGA GTTTCTGTAAGGTGA gltX 3538063 - 3536654 - | glutamyl-tRNA synthetase TERM 3379 3536908 - 3536933 + g 72 -4.8 -4.58685 | overlap 3536898 3536910 TAACCGCCTCAAGAG GC-TCTTGCGCC ACAG GGCG-AAGATGC TTTTTAGCCGCCTTT TERM 3380 3537822 - 3537832 + g 85 -6.8 -4.95484 | ATGAGCGCTTTATAT CGGT CGA ACCG TTTTGTTTGATAATA TERM 3381 3538008 - 3537994 - G 72 -5.7 -4.49364 | AAAGCCAAGAATAAA GTGCA GTACG TGCAC CACCAACATGTAAAA TERM 3382 3538648 - 3538628 - H 71 -3.9 -4.87665 | GCTCAGTTAGAAAAA GAGAAGAGC ATC GCCACTCTC TGCAAGAAACGGTCG TERM 3383 3538894 - 3538874 - H 71 -3.9 -4.87665 | GCTCAGTTAGAAAAA GAGAAGAGC ATC GCCACTCTC TACAAGAAACGGTCG Patl_2920 3539802 - 3541418 + | response regulator receiver protein Patl_2921 3542978 - 3541734 - | kynureninase TERM 3384 3542714 - 3542734 + g 85 -6.8 -5.0538 | overlap 3542715 TCACCTGCTCTGGTG CTGCGCCA ATGAG TGGCGCAA TTTTTTCACCTACGG TERM 3385 3542715 - 3542733 + g 79 -10.3 -3.62746 | overlap 3542714 CACCTGCTCTGGTGC TGCGCCA ATGAG TGGCGCA ATTTTTTCACCTACG Patl_2922 3543901 - 3542978 - | putative lipase/esterase TERM 3386 3543179 - 3543200 + g 87 -10.1 -4.2558 | opp_overlap 3543171 GTAATGATCGGGCGA GCCTGAAGC GTAA GCTTCTGGC TTTTGCTCAGCACTG Patl_2923 3545262 - 3544078 - | acetyl-CoA acetyltransferases TERM 3387 3545355 - 3545343 - H 71 -4.9 -4.48664 | opp_overlap 3545334, overlap 3545334 TAAATATATAATAAA CATTA TAT TAATG AAAACTACCTATTTA TERM 3388 3545475 - 3545431 - H 76 -11 -2.55253 | ACGAATTGTAACTCA TACTTTACCTTTACGTTAAG TTACT CTTTACGTAAACGTAAAGCA AATATCCATTATTAA Patl_2924 3545542 - 3545937 + | MerR family transcriptional regulator TERM 3389 3546428 - 3546418 - g 74 -5.4 -4.68103 | TTAACGGCAATAAAA TGTG GAT CACA AATGGCCCTGACGCT Patl_2925 3545934 - 3547103 + | isovaleryl-CoA dehydrogenase TERM 3390 3547576 - 3547565 - g 74 -5.8 -4.62471 | GTTAACGGTGAAAAA GCAC TTAC GTGC GCAAACCATAGCTCA TERM 3391 3547756 - 3547771 + G 73 -10.4 -3.05463 | TGGTCATGGGAAGTT GCACCG CAGG CGGTGC TTACGTACCAGCGAT TERM 3392 3548219 - 3548232 + G 70 -2.3 -4.9448 | overlap 3548220 TCCAGTAGGTATTAT CGCCA ACAA TGGCA TTTTATTTAGTGAAT Patl_2926 3547194 - 3548801 + | propionyl-CoA carboxylase Patl_2927 3548814 - 3549635 + | enoyl-CoA hydratase/isomerase TERM 3393 3550084 - 3550070 - g 86 -4.2 -5.60993 | opp_overlap 3550083, overlap 3550073 GCGCTGATAAAAAAA CACGCC GAT GACATG GGCTATCCCGTATTA TERM 3394 3550826 - 3550839 + G 72 -8.1 -3.68908 | opp_overlap 3550826 GATACAGATCGAGAA CGTGC TTTA GCACG TTTAAGTCAGTCTTT TERM 3395 3551203 - 3551193 - g 72 -3.2 -4.91712 | TTGAACGGATAAAAA GTGA CAA CCAC GCCCCCCATCAGCAG Patl_2928 3549632 - 3551659 + | carbamoyl-phosphate synthase L chain, ATP-binding Patl_2929 3551656 - 3552573 + | pyruvate carboxyltransferase Patl_2930 3553023 - 3552613 - | hypothetical protein Patl_2931 3553708 - 3553169 - | hypothetical protein TERM 3396 3553654 - 3553631 - G 75 -9.6 -3.63895 | overlap 3553632 TCTAACCACTTTAAA TTCGGATGGT AACA ACCATCCGAC CACCACAAAAAACAT TERM 3397 3553653 - 3553632 - G 82 -13.1 -2.78015 | overlap 3553631 CTAACCACTTTAAAT TCGGATGGT AACA ACCATCCGA CCACCACAAAAAACA TERM 3398 3553905 - 3553918 + H 71 -5.3 -4.64766 | ATCGCTATATAGCTG CACTA ATAG TAGTG TTTTTGCCCTGTGCA TERM 3399 3554265 - 3554279 + G 81 -8.5 -4.45168 | CGAACTGACCGACTG GCGGG CTAAA CCCGC TTTATATTTTGGAGG TERM 3400 3555168 - 3555183 + G 72 -5.4 -4.4009 | opp_overlap 3555154, overlap 3555154 ATCTGGGGCAACCGT GCGCAA GAGT TTGTGC TTTTCTAACGTCCAC Patl_2932 3554161 - 3555423 + | glucose-1-phosphate adenylyltransferase TERM 3401 3555487 - 3555440 - T 93 -10.9 -5.09685 | gap 1, opp_overlap 3555440 3555439 3555456, overlap 3555456 GAATATATAGAAAAA GTT-GCCCACAAAAAAACCAGA TTCAG TCTGGTTTTTTTGTGCCCTAAC GTTACTTATCTGTGG TERM 3402 3555440 - 3555487 + T 79 -11.6 -2.70907 | gap 1, opp_overlap 3555440 3555456, overlap 3555439 3555456 GAATATATAGAAAAA GTT-GCCCACAAAAAAACCAGAT TCA GTCTGGTTTTTTTGTGCCCTAAC GTTACTTATCTGTGG TERM 3403 3555470 - 3555456 - T 93 -5.7 -5.60993 | opp_overlap 3555456 3555440 3555439, overlap 3555440 TTGCCCACAAAAAAA CCAGA TTCAG TCTGG TTTTTTTGTGCCCTA TERM 3404 3555456 - 3555470 + T 95 -6.4 -5.626 | opp_overlap 3555440 3555456, overlap 3555440 3555439 TTGCCCACAAAAAAA CCAGAT TCA GTCTGG TTTTTTTGTGCCCTA Patl_2933 3556328 - 3555489 - | alpha/beta hydrolase fold Patl_2934 3557681 - 3556356 - | major facilitator transporter Patl_2935 3557938 - 3558750 + | TesB family acyl-CoA thioesterase TERM 3405 3558800 - 3558783 - T 95 -11.3 -4.8083 | opp_overlap 3558783 GAACACCACTAAAAA GAGCGCT GATA AGCGCTC TTTTTTTATCCTACT TERM 3406 3558783 - 3558800 + T 100 -11.3 -5.67967 | opp_overlap 3558783 GAACACCACTAAAAA GAGCGCT GATA AGCGCTC TTTTTTTATCCTACT Patl_2936 3559702 - 3558857 - | putative signal transduction protein TERM 3407 3559406 - 3559387 - G 72 -2.8 -5.02074 | overlap 3559390 CTAGCTCCCAAAAAA CACTGAAG TCCA CCTCACTG TCATTCATATCTTTA TERM 3408 3560473 - 3560461 - R 74 -4.8 -4.68446 | opp_overlap 3560461, overlap 3560430 3560452 AAAAAGCATACAAAA CGCA TGTTG TGCG GTTATTTTTTACGCT TERM 3409 3560543 - 3560522 - R 73 -8.8 -3.74488 | opp_overlap 3560522, overlap 3560518 TAATAAAATAAGGAA TGCCGTTA TCTATT TAACGGCA TTTAATTTAATTTCA TERM 3410 3560522 - 3560543 + r 82 -8.8 -4.17878 | opp_overlap 3560522 3560518 TAATAAAATAAGGAA TGCCGTTA TCTATT TAACGGCA TTTAATTTAATTTCA Patl_2937 3561286 - 3560531 - | tetratricopeptide TPR_2 Patl_2938 3561858 - 3561298 - | OmpA/MotB Patl_2939 3563260 - 3561905 - | TolB-like Patl_2940 3564156 - 3563260 - | hypothetical protein TERM 3411 3563645 - 3563658 + g 77 -3.8 -5.2204 | overlap 3563637 GCTTTCTTGCGCTGC GCCT CTTTCA AGGC TTTTTCTTCCTTCTC TERM 3412 3564028 - 3564053 + g 71 -6.9 -4.15222 | opp_overlap 3564028 CACGGCCTCTATAAC CGGTTGAGATG ACGC CATTTCAAGCG TTTCTTGAGGCAACT Patl_2941 3564592 - 3564170 - | biopolymer transport protein ExbD/TolR Patl_2942 3565315 - 3564605 - | MotA/TolQ/ExbB proton channel Patl_2943 3565727 - 3565305 - | 4-hydroxybenzoyl-CoA thioesterase TERM 3413 3566249 - 3566269 + r 100 -15.5 -5.85178 | TTTATTTGTTGCTTT GCCCGCATA ATT TATGCGGGC TTTTTTTTGCCTATT ruvB 3567338 - 3566331 - | Holliday junction DNA helicase B Patl_2945 3568098 - 3567469 - | Holliday junction DNA helicase RuvA Patl_2946 3568636 - 3568115 - | crossover junction endodeoxyribonuclease RuvC TERM 3414 3568692 - 3568721 + r 75 -7.9 -4.03234 | gap 1 GTTGGCATGTTCGCA TCGGGTACGCAATC TTT GATTGCA-GCCCGA TTTGTATCAGACCAG ntpA 3569056 - 3568673 - | dATP pyrophosphohydrolase TERM 3415 3569104 - 3569063 - R 73 -9.5 -3.21099 | overlap 3569065 3569066 GCGCTGCATCACTAA CACTCGACATTGGCAGTCA TATA TGACCACCAATGCCGATTC AGGACGCCGATAAGC TERM 3416 3569102 - 3569065 - R 83 -12.1 -3.17051 | overlap 3569063 3569066 GCTGCATCACTAACA CTCGACATTGGCAGTCA TATA TGACCACCAATGCCGAT TCAGGACGCCGATAA TERM 3417 3569101 - 3569066 - R 95 -15.6 -2.50016 | overlap 3569065 3569063 CTGCATCACTAACAC TCGACATTGGCAGTCA TATA TGACCACCAATGCCGA TTCAGGACGCCGATA aspS 3570921 - 3569143 - | aspartyl-tRNA synthetase TERM 3418 3571193 - 3571217 + H 73 -10.1 -2.86271 | overlap 3571190 GTGCAATAATTGTTA TTCTTGTGACT CAT AGTCACGAGAG TCCTTATGCTAAGAG TERM 3419 3571320 - 3571306 - g 80 -6.4 -4.86773 | opp_overlap 3571308 3571311 3571312, overlap 3571296 CAAAAGCAGCAAAAA GACTGC CCT GCAATC CTATAGCAGGCTGTT TERM 3420 3571414 - 3571397 - g 70 -2.5 -5.04385 | overlap 3571398 GACACCCTTAAAAAA TGGCTCG ACAG CGTGCCT GATGATTTTCGCTTT TERM 3421 3571827 - 3571813 - g 71 -3.4 -4.74103 | TGTTCAACGTAAAAA GCCGCG GGT CCCGAC CAATGTTATCGCTAC Patl_2949 3571223 - 3572125 + | hypothetical protein TERM 3422 3572193 - 3572168 - T 95 -8.3 -5.48054 | gap 1 ACCAAAACTAAAAAA CGCCCGA-AGTG AAT CACTGCCGGACG CTTAGCTAATCAAGC Patl_2950 3573466 - 3572273 - | ABC-type Na+ efflux pump, permease component TERM 3423 3573044 - 3573020 - G 70 -4.9 -4.43189 | opp_overlap 3573012 3573020, overlap 3573021 ACCAAGTTCAGAAAA CGCTGATGCTT GAT ACGCATCGGCA TACTTTTGCACCATT Patl_2951 3574263 - 3573481 - | ABC transporter related Patl_2952 3574507 - 3575214 + | hypothetical protein Patl_2953 3576107 - 3575253 - | hypothetical protein TERM 3424 3577030 - 3577007 - g 79 -3 -5.27335 | overlap 3577012 TTTGCCAAAGAAAAA GCCAAGGCCT TAAA AGGCCCCTAC CACACTAGCCTAAAA Patl_2954 3576185 - 3577828 + | peptidase M28 TERM 3425 3577885 - 3577858 - f 95 -12 -4.25283 | opp_overlap 3577848 3577858 3577856 3577855 3577853 ATTGCCCCACCAAAA CCGGTTGGTGAG TTTT CCAACCAACCGG TCATTTGTCTTTTAA TERM 3426 3577858 - 3577885 + F 73 -9.8 -3.18509 | opp_overlap 3577858, overlap 3577848 3577856 3577855 3577853 ATTGCCCCACCAAAA CCGGTTGGTGAG TTTT CCAACCAACCGG TCATTTGTCTTTTAA asnB 3578144 - 3579814 + | asparagine synthetase B TERM 3427 3579851 - 3579862 + T 100 -7.2 -5.65177 | opp_overlap 3579851 3579845, overlap 3579850 GCAAACTAATAAAAA CCGC TTCG GCGG TTTTTTTGTGCCTGT TERM 3428 3579862 - 3579851 - T 90 -7.2 -5.24551 | opp_overlap 3579850 3579851, overlap 3579845 GCAAACTAATAAAAA CCGC TTCG GCGG TTTTTTTGTGCCTGT TERM 3429 3579970 - 3579957 - T 85 -5.9 -5.30686 | opp_overlap 3579957 AACAGCCATAAAAAA GGAGC TTAC GCCCC TTATTCACTGATTTA Patl_2956 3580892 - 3580005 - | short-chain dehydrogenase/reductase SDR TERM 3430 3580260 - 3580277 + g 77 -3.3 -5.21236 | overlap 3580260 3580261 TTTATCTTGGCGATC TGCGGGG GCAA CCGCGTA TTTTTCTTGTCGATT TERM 3431 3581873 - 3581863 - g 74 -6.8 -4.34267 | overlap 3581864 3581866 TCATATAAGTTAAAA GCAC TCG GTGC CAGTGATGTCCTGCT Patl_2957 3581278 - 3582285 + | zinc-binding alcohol dehydrogenase TERM 3432 3582361 - 3582391 + T 90 -12.6 -3.68908 | opp_overlap 3582363, overlap 3582363 TATATCTAACGCAGA AAGGCCACAGTGAA GTA TTCACCGTGGCCTC TTTCACTGCCTATTT TERM 3433 3582389 - 3582363 - T 100 -17.4 -3.98083 | opp_overlap 3582361 3582363 TATCTAACGCAGAAA GGCCACAGTGAA GTA TTCACCGTGGCC TCTTTCACTGCCTAT TERM 3434 3582363 - 3582389 + T 100 -15.2 -3.41836 | opp_overlap 3582363, overlap 3582361 TATCTAACGCAGAAA GGCCACAGTGAA GTA TTCACCGTGGCC TCTTTCACTGCCTAT Patl_2958 3583330 - 3582458 - | hypothetical protein Patl_2959 3583757 - 3583323 - | hypothetical protein TERM 3435 3583453 - 3583469 + g 70 -5.1 -4.43283 | GTATAAGAGGTAGCA CAGGTAA AAA TAACCTG TTTGTCTTTATCTAA Patl_2960 3584518 - 3583772 - | radical SAM family protein TERM 3436 3583991 - 3584001 + g 80 -6.8 -4.58395 | TATCTCGTTCGCTCG GTGC ATT GCAC TTTTTAACACATCAC TERM 3437 3584038 - 3584056 + g 82 -13.2 -2.88663 | opp_overlap 3584035 3584036 3584049 CTGGCATATTAACTT TGGGTGAC ACA GTCACCCA TGTGTCAGGATGGGT TERM 3438 3584363 - 3584343 - G 71 -9.6 -3.16564 | TTTGTATCGCACCAA GGGCAGCC TACAG GGCAGCCC TGAAGACGAATAAAA TERM 3439 3584408 - 3584380 - G 85 -6.1 -5.19251 | gap 1, overlap 3584382 GAAGACGAATAAAAA TAGAAGGCACTC CAGTAT GAGCGCCTTC-A CCTTGCAGAGATTCA TERM 3440 3584407 - 3584382 - G 91 -11.2 -4.20491 | overlap 3584380 AGACGAATAAAAATA GAAGGCACTC CAGTAT GAGCGCCTTC ACCTTGCAGAGATTC Patl_2961 3584552 - 3585208 + | exsB protein Patl_2962 3586300 - 3585380 - | LysR family transcriptional regulator Patl_2963 3588518 - 3586509 - | excinuclease ABC subunit B Patl_2964 3589915 - 3588554 - | MATE efflux family protein Patl_2965 3591647 - 3592228 + | electron transport complex, RnfABCDGE type, A subunit TERM 3441 3592572 - 3592555 - g 86 -2.6 -5.80248 | overlap 3592556 GAAGACATAAAAAAA GTCGCG TTTATT CGCGAA GATGAATGTATAGGG Patl_2966 3592228 - 3592794 + | electron transport complex protein RnfB TERM 3442 3592865 - 3592875 + G 84 -8.2 -4.72272 | opp_overlap 3592858 CAAATTATGGGATTT CCCC GGA GGGG TTTTTCCTGCACAGC TERM 3443 3595190 - 3595165 - g 77 -6.9 -4.52857 | gap 1, overlap 3595167 AGCCGGTAGAGAAAA CACCTGAACAGT ATG AC-GTTCAGGAG CGTGATCCTGCTGAA TERM 3444 3595188 - 3595167 - g 74 -8.1 -3.87627 | gap 1, overlap 3595165 CCGGTAGAGAAAACA CCTGAACAGT ATG AC-GTTCAGG AGCGTGATCCTGCTG TERM 3445 3595226 - 3595214 - g 78 -4.8 -5.0916 | overlap 3595223 TGCTGAACAGAAAAA GGCA CGAAT TGCC GCTGCGGTAGCCAAA Patl_2967 3592794 - 3595466 + | electron transport complex, RnfABCDGE type, C subunit Patl_2968 3595475 - 3596548 + | electron transport complex, RnfABCDGE type, D subunit Patl_2969 3596545 - 3597192 + | electron transport complex, RnfABCDGE type, G subunit Patl_2970 3597199 - 3597897 + | SoxR-reducing system protein RsxE Patl_2971 3597932 - 3598564 + | endonuclease III TERM 3446 3598666 - 3598633 - T 75 -10.4 -3.15861 | opp_overlap 3598623 3598629 3598641 CACCATGGTTATTAA CCGTATTAGGCACA TTGTGT TGTGCCTAATTCGA CAAATTTAAAAAGAA TERM 3447 3598692 - 3598679 - T 71 -3.9 -4.84529 | opp_overlap 3598679 CGACAAATTTAAAAA GAAAA TACA TTTTC TTTTTGCGTATAAAA TERM 3448 3598699 - 3598711 + T 77 -6.3 -4.49337 | TACATTTTCTTTTTG CGTAT AAA ATACG TTTTGTAGGTTATAC Patl_2972 3599077 - 3598721 - | DoxX Patl_2973 3599177 - 3600070 + | LysR family transcriptional regulator Patl_2974 3600175 - 3600426 + | Iron-sulfur cluster loop Patl_2975 3601277 - 3600513 - | lipase, putative Patl_2976 3601948 - 3601262 - | hypothetical protein Patl_2977 3602959 - 3602009 - | short-chain dehydrogenase/reductase SDR TERM 3449 3603009 - 3602984 - H 77 -8.3 -3.93369 | opp_overlap 3602987, overlap 3602985 TCAATTTTAATTAAA CCAGTAACGGC TAAA GCAGTTACTGA TTCAAAACTTAAATT TERM 3450 3603008 - 3602985 - H 72 -9.6 -2.95539 | opp_overlap 3602987, overlap 3602984 CAATTTTAATTAAAC CAGTAACGGC TAAA GCAGTTACTG ATTCAAAACTTAAAT TERM 3451 3603352 - 3603338 - g 76 -8.6 -4.17316 | AGTGGTGGAAAAGAA GCCATT TGG AATGGC AATAAACATTATTAT Patl_2978 3603170 - 3604063 + | AraC family transcriptional regulator Patl_2979 3604280 - 3604447 + | Iron-sulfur cluster loop Patl_2980 3604481 - 3604675 + | hypothetical protein Patl_2981 3604749 - 3605501 + | hypothetical protein Patl_2982 3606086 - 3605580 - | hypothetical protein TERM 3452 3605805 - 3605825 + g 73 -2.5 -5.15969 | AAGTTTGGGCAGCTT GCGATTAAT TTT GTTGAGCGC TTTTTTCAGTTCCCA Patl_2983 3607653 - 3606148 - | putative heat shock protein 70 family protein Patl_2984 3608709 - 3607927 - | hypothetical protein TERM 3453 3608886 - 3608858 - R 73 -10.4 -2.91395 | opp_overlap 3608864, overlap 3608864 ACGGGCTTTAGAAAC GAAAAAGGCTCC ACAAG GGAGCCTTTTTT AACGAACTACTATTT TERM 3454 3608880 - 3608864 - R 93 -9.4 -5.04601 | opp_overlap 3608864, overlap 3608858 TTTAGAAACGAAAAA GGCTCC ACAAG GGAGCC TTTTTTAACGAACTA TERM 3455 3608864 - 3608880 + r 93 -9.4 -5.0133 | opp_overlap 3608864 3608858 TTTAGAAACGAAAAA GGCTCC ACAAG GGAGCC TTTTTTAACGAACTA TERM 3456 3608924 - 3608935 + r 73 -5.8 -4.53648 | CTAAAGCGTAATACC GCGA TTCT TCGC TTTCTCTTTTATATA Patl_2985 3610168 - 3608909 - | TPR repeat-containing protein TERM 3457 3608957 - 3608983 + g 83 -9.4 -4.2687 | overlap 3608958 TTTTATATAAGGTTC CCAACTTCTCGC ACT GCGTGAAGTTGA TTTGTCCTTTTTGGC TERM 3458 3608958 - 3608982 + g 83 -12.9 -3.15037 | overlap 3608957 TTTATATAAGGTTCC CAACTTCTCGC ACT GCGTGAAGTTG ATTTGTCCTTTTTGG TERM 3459 3609815 - 3609842 + g 71 -7 -4.14874 | overlap 3609807 ACCAGCTTGTTCAGT GTCATTGAGCGC TTTA GCGTTTACTGAC TTTTCCAAATATTCT Patl_2986 3610782 - 3610168 - | TonB family protein Patl_2987 3611185 - 3610784 - | biopolymer transport protein ExbD/TolR Patl_2988 3611722 - 3611198 - | MotA/TolQ/ExbB proton channel Patl_2989 3613076 - 3611724 - | MotA/TolQ/ExbB proton channel Patl_2990 3613846 - 3613082 - | hypothetical protein Patl_2991 3614365 - 3615339 + | methyltransferase type 11 Patl_2992 3617592 - 3615946 - | tetratricopeptide TPR_2 TERM 3460 3617641 - 3617660 + r 88 -10.7 -4.09864 | opp_overlap 3617641 AAATGTCAAAAAAAA GGTCGGC ATATAA GCCGACC TTTTAAACGGTAAAT TERM 3461 3617660 - 3617641 - R 100 -10.7 -5.82388 | opp_overlap 3617641 AAATGTCAAAAAAAA GGTCGGC ATATAA GCCGACC TTTTAAACGGTAAAT Patl_2993 3620582 - 3617682 - | TonB-dependent receptor TERM 3462 3618520 - 3618543 + g 79 -10.4 -3.55444 | gap 1, opp_overlap 3618509 AAAGCACTAGTCTGA TACTGCGCCTC TGT GAGGC-CAGTA TTTAGACACTGGGCC TERM 3463 3618708 - 3618733 + g 74 -5.5 -4.68545 | opp_overlap 3618715 GTTAATACCCCAGTT CAATGCATACT TGTA AGTATTCGTTG TTTTGTCTGTTGAGT TERM 3464 3619204 - 3619214 + g 87 -6.8 -5.23316 | TCAGGATCAATTCGA GCGT CTA ACGC TTTTTTCATATGATC TERM 3465 3620403 - 3620423 + g 70 -9.7 -3.07816 | overlap 3620412 TTCAGTAACTGGGCT AGCGCTAAC CAT GTTAGCGCG TTGAATGCGTGAACC TERM 3466 3620622 - 3620633 + H 89 -5.8 -5.4833 | GTGTTTAGTGTTTAT TCGC TAAT GCGA TTTTTTATTAAATAA Patl_2994 3621079 - 3621345 + | hypothetical protein Patl_2995 3622701 - 3621586 - | Glu/Leu/Phe/Val dehydrogenase, dimerisation region Patl_2996 3622858 - 3623328 + | AsnC family transcriptional regulator Patl_2997 3624542 - 3623460 - | 4-hydroxyphenylpyruvate dioxygenase TERM 3467 3624685 - 3624633 - R 72 -4.6 -4.6951 | gap 2, overlap 3624634 3624648 ATCAGTTAAAACAAA CGAAACGAACAAA-AA-GTAACATAA ACT TTACATTACATTTTTTGCTCGCTTCA AGCGGTCAGAATCGC TERM 3468 3624668 - 3624648 - R 78 -4.1 -5.24551 | overlap 3624634 3624633 CGAAACGAACAAAAA GTAACATAA ACT TTACATTAC ATTTTTTGCTCGCTT Patl_2998 3626302 - 3624746 - | transcriptional regulator, TyrR TERM 3469 3625563 - 3625596 + g 72 -8.9 -3.57462 | CGACTTGCTTCGTGA CAGGCATGGGCGA TTAACTCT TTGCCTGTGCCTG TTTCGCCGTACAATA phhA 3627235 - 3626435 - | phenylalanine 4-monooxygenase TERM 3470 3626630 - 3626663 + g 70 -10.2 -2.56124 | overlap 3626629 3626629 TGGGTTCATTTCACG ACGCTCCGCGCTGG CATTTT CTAGCGCGAAGCGA GTCTCTTTAGGTGAG TERM 3471 3627338 - 3627326 - R 77 -4.9 -4.92757 | CTAGCAACAATAAAA TTACA AAA TGTAA ACATTAAGCTACAAA Patl_3000 3628738 - 3627662 - | hypothetical protein Patl_3001 3630159 - 3628735 - | protein of unknown function DUF463, YcjX-like protein TERM 3472 3629028 - 3629040 + g 76 -4.9 -4.73635 | CTGTGGATACACCAT CAAAT TGC ATTTG TTTTCTTGCATTGTG TERM 3473 3629091 - 3629115 + g 74 -8.6 -3.90112 | opp_overlap 3629111, overlap 3629111 TCACCAAGTTACTTT GCTGATCAGG AGTGA CATGATCAGC TTTGCTTGCGGCAAA TERM 3474 3629983 - 3629971 - G 78 -5.5 -4.88736 | opp_overlap 3629946 3629971, overlap 3629945 CACCACTGAGAAAAA GGCTA ATT CAGCC GTTTCATTTGCTTCT Patl_3002 3630783 - 3630322 - | phage shock protein C, PspC pspB 3631016 - 3630780 - | phage shock protein B Patl_3004 3631722 - 3631039 - | phage shock protein A, PspA TERM 3475 3632975 - 3632955 - g 78 -6.1 -4.56314 | opp_overlap 3632960, overlap 3632960 CCAATACAATCAAAA GAAAACCGC GGA GCGATTGTC TCTAACGTACCATCA TERM 3476 3632970 - 3632960 - g 79 -4.6 -5.19998 | opp_overlap 3632960, overlap 3632955 ACAATCAAAAGAAAA CCGC GGA GCGA TTGTCTCTAACGTAC Patl_3005 3631939 - 3633051 + | sigma-54 dependent trancsriptional regulator Patl_3006 3633057 - 3634691 + | extracellular solute-binding protein TERM 3477 3635409 - 3635438 + G 76 -2.2 -5.40072 | gap 2, opp_overlap 3635405 3635406, overlap 3635413 AGTACATACAAGCGG CTTATGCTCGTGGC TTAA GCC-CGAG-ACAAG TTTTTTTGCGCCACG Patl_3007 3634691 - 3635722 + | binding-protein-dependent transport systems inner membrane component Patl_3008 3635709 - 3636602 + | binding-protein-dependent transport systems inner membrane component Patl_3009 3636602 - 3637597 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Patl_3010 3637594 - 3638379 + | ABC transporter related TERM 3478 3638449 - 3638422 - T 100 -11.4 -5.49234 | opp_overlap 3638422 ATATCCAATAAAAAA GGGCTTAGCA GTGTATGT TGCTAAGCCC TTTTTAGTGGTGTGT TERM 3479 3638422 - 3638449 + T 100 -12.8 -4.79826 | opp_overlap 3638422 ATATCCAATAAAAAA GGGCTTAGCAGT GTAT GTTGCTAAGCCC TTTTTAGTGGTGTGT Patl_3011 3639612 - 3638482 - | sodium ion-translocating decarboxylase, beta subunit TERM 3480 3638833 - 3638821 - G 75 -6.3 -4.39696 | opp_overlap 3638821 CGCTAAACCAAGAAA TATCG TGA CGATA TTAATCAATTCGTTC Patl_3012 3641412 - 3639622 - | pyruvate carboxylase subunit B Patl_3013 3641772 - 3641443 - | sodium pump decarboxylases, gamma subunit TERM 3481 3641994 - 3642011 + r 95 -11.3 -4.82667 | opp_overlap 3641994 CTGAGCAAAAAAAAA CCCACTG AAAT CAGTGGG TTTTTAATGTGGTGC TERM 3482 3642011 - 3641994 - R 100 -11.3 -6.15828 | opp_overlap 3641994 CTGAGCAAAAAAAAA CCCACTG AAAT CAGTGGG TTTTTAATGTGGTGC TERM 3483 3642745 - 3642731 - R 100 -7.1 -5.60993 | opp_overlap 3642731 TTTCGCATAAAAAAA GCTGG GTAAA CCAGC TTTTTTTTATCAGAA TERM 3484 3642731 - 3642745 + r 100 -7.1 -5.93809 | opp_overlap 3642731 TTTCGCATAAAAAAA GCTGG GTAAA CCAGC TTTTTTTTATCAGAA Patl_3014 3642985 - 3642770 - | carbon storage regulator, CsrA Patl_3015 3645718 - 3643121 - | alanyl-tRNA synthetase TERM 3485 3643984 - 3643964 - G 73 -7.5 -4.14397 | ATGCGAGAAATCAAA GCGCAAGCG ATC CGCTTGTAC TAACGAACCTTTTTG TERM 3486 3645752 - 3645783 + r 80 -10.3 -3.72374 | opp_overlap 3645746 3645760, overlap 3645760 ATTTAATGATTTGAG GGTAAAAATGGCC TCAAAC GGCCATTTTTAAC TATTTATTAGTCGGC TERM 3487 3645775 - 3645760 - R 77 -6.1 -4.62336 | opp_overlap 3645752 3645760, overlap 3645746 ATTTGAGGGTAAAAA TGGCC TCAAAC GGCCA TTTTTAACTATTTAT TERM 3488 3645760 - 3645775 + r 80 -6.1 -4.7889 | opp_overlap 3645746 3645760, overlap 3645752 ATTTGAGGGTAAAAA TGGCC TCAAAC GGCCA TTTTTAACTATTTAT Patl_3016 3646311 - 3645844 - | regulatory protein RecX Patl_3017 3646338 - 3647492 + | hypothetical protein Patl_3018 3648175 - 3647546 - | hypothetical protein TERM 3489 3650945 - 3650934 - R 71 -7.2 -3.89822 | TATTTAGTGTACAAA GGGC TCAA GCCC AGAAAGACGTAGTTT Patl_3021 3652939 - 3652013 - | homoserine O-succinyltransferase TERM 3490 3653030 - 3653001 - R 73 -9.5 -3.12668 | CCGTAAATGTCAACA TCTTTACGTCTAG ACGT CTAAACGTAAAAA CTGCTTAAGTTCAAA Patl_3022 3653657 - 3653253 - | hypothetical protein TERM 3491 3653399 - 3653441 + g 73 -4.3 -4.76963 | gap 2 CCTGACTGGCGAGTT GCTCTTGTTGGCTAGCGGT TTGTCTT ACCG-TAGC-AACGAGTGC TTTTATCTTGTCTCC Patl_3023 3654188 - 3653694 - | CheW protein Patl_3024 3655075 - 3654212 - | CheW protein Patl_3025 3655851 - 3655072 - | cobyrinic acid a,c-diamide synthase Patl_3026 3657059 - 3655920 - | chemotaxis-specific methylesterase TERM 3492 3657095 - 3657110 + r 78 -2.5 -5.46657 | GTGTTTAACGCGCTT GTCGA ATGGCA TCGGC TTTTTTCTTAGCATA Patl_3027 3659348 - 3657084 - | CheA signal transduction histidine kinases Patl_3028 3660104 - 3659361 - | chemotaxis phosphatase, CheZ Patl_3029 3660519 - 3660136 - | response regulator receiver protein fliA 3661295 - 3660567 - | flagellar biosynthesis sigma factor Patl_3031 3662158 - 3661292 - | cobyrinic acid a,c-diamide synthase Patl_3032 3663486 - 3662155 - | GTP-binding signal recognition particle TERM 3493 3662606 - 3662616 + g 76 -4.6 -5.00616 | TCTGATAACTCTTCA GCGT TCT GCGC TTTTTTCACCGAGCA flhA 3665623 - 3663521 - | flagellar biosynthesis protein FlhA TERM 3494 3664170 - 3664150 - G 70 -9 -3.30124 | gap 1 GGTGAGTCGCGACAA CCGTGG-CG CTAT CGACCACGG TATAACCTAACGTTT Patl_3034 3666869 - 3665745 - | flagellar biosynthetic protein FlhB TERM 3495 3666767 - 3666804 + g 75 -2.6 -5.26316 | gap 2, opp_overlap 3666767 TAAAGACTAAAACAA GGGCC--GTCGAGAGTTC TTTG GATCGCGCGACTTGGCCC TTTTTTCTGGAGTCG fliR 3667661 - 3666882 - | flagellar biosynthesis protein FliR Patl_3036 3667932 - 3667663 - | flagellar biosynthetic protein FliQ fliP 3668690 - 3667935 - | flagellar biosynthesis protein FliP Patl_3038 3669183 - 3668683 - | flagellar biosynthesis protein, FliO fliN 3669538 - 3669143 - | flagellar motor switch protein fliM 3670617 - 3669559 - | flagellar motor switch protein FliM fliL 3671163 - 3670636 - | flagellar basal body-associated protein FliL Patl_3042 3673413 - 3671242 - | flagellar hook-length control protein TERM 3496 3672356 - 3672344 - G 71 -7.7 -3.90588 | overlap 3672347 GAGCCTTCAAGCAAA TCAGC TGT GCTGA CAGCCACAGCGTTCG Patl_3043 3674211 - 3673771 - | flagellar export protein FliJ fliI 3675630 - 3674296 - | flagellum-specific ATP synthase fliH 3676437 - 3675637 - | flagellar assembly protein H fliG 3677520 - 3676465 - | flagellar motor switch protein G fliF 3679270 - 3677564 - | flagellar MS-ring protein Patl_3048 3679622 - 3679281 - | flagellar hook-basal body complex subunit FliE TERM 3497 3679570 - 3679588 + g 79 -11.8 -3.12895 | opp_overlap 3679576, overlap 3679560 3679561 3679576 3679578 AATCCTGCTTTGCTT TGCAAAGC CAT GCTTTGCA TGTCTTGATAAAGAG TERM 3498 3679880 - 3679862 - R 100 -10.3 -5.42259 | TTAGGGGTAAAAAAA CCGCCTA TCGTT TAGGCGG TCAATGGTGGTATTA Patl_3049 3681292 - 3679949 - | two component, sigma54 specific, Fis family transcriptional regulator Patl_3050 3682493 - 3681297 - | histidine kinase Patl_3051 3684081 - 3682648 - | sigma-54 dependent trancsriptional regulator TERM 3499 3683688 - 3683708 + g 76 -4 -5.09259 | opp_overlap 3683693 GATTGCTTTTGCCCA CTAAACTG CGAAA CAGTTTTG TTTTATTTTGCGGTG TERM 3500 3683833 - 3683811 - G 71 -9.8 -3.14564 | overlap 3683788 TCACTGCCCCATCAA CAGTGCCTAC TCG GTTGGCACCG GACTTAAAATTTGGA TERM 3501 3684310 - 3684298 - R 100 -6.2 -5.70829 | opp_overlap 3684298 AACAGCATAAAAAAA GGCC TGAAT GGCC TTTAGTTTATCGCAG TERM 3502 3684298 - 3684310 + r 71 -6.2 -4.13995 | opp_overlap 3684298 AACAGCATAAAAAAA GGCC TGAAT GGCC TTTAGTTTATCGCAG Patl_3052 3685137 - 3684334 - | flagellin-like TERM 3503 3687445 - 3687429 - g 72 -6.7 -4.22652 | TTAGACTATTTAAAA GAAATAA CGC TTATTTC CTGCAATGGTATTCA TERM 3504 3687998 - 3687986 - g 71 -3.4 -4.90296 | AAAACTGCATAAAAA GGTT TTCTC AACC AAGCACAGTACCCAC Patl_3053 3685539 - 3689078 + | hypothetical protein TERM 3505 3689792 - 3689776 - g 79 -8.1 -4.32034 | CTATCATTATGAAAA CATCATT TCT AATGATG CAACTAAATCAAAGT Patl_3054 3689153 - 3689950 + | hypothetical protein Patl_3055 3690764 - 3689985 - | cephalosporin hydroxylase TERM 3506 3690351 - 3690387 + g 86 -13.1 -3.4072 | opp_overlap 3690379 TTGGATCATTTCAAT TCGTGATGCCATAGGGT GGC ACTCAATAGCATCACGA TTATGCTCACGGATG Patl_3056 3691467 - 3690757 - | hypothetical protein Patl_3057 3692163 - 3691468 - | formyl transferase-like Patl_3058 3692792 - 3692166 - | methyltransferase type 12 TERM 3507 3692936 - 3692946 + r 73 -5.4 -4.48987 | CTAGCTTAGCTCACT CGTT TCT AACG TTTTGATTCTCACAC Patl_3059 3694093 - 3692981 - | DegT/DnrJ/EryC1/StrS aminotransferase Patl_3060 3695310 - 3694090 - | C-methyltransferase TERM 3508 3694905 - 3694919 + g 73 -11.4 -2.73483 | overlap 3694907 GGATGCCCAATTTTT CAGCCG CGG CGGCTG TGCTTGCGGTGGGCT Patl_3061 3695870 - 3695307 - | dTDP-4-dehydrorhamnose 3,5-epimerase Patl_3062 3696925 - 3695867 - | CDP-glucose 4,6-dehydratase TERM 3509 3696180 - 3696195 + g 73 -4 -4.81083 | overlap 3696159 GCGCCAGCTAATTCA GGTTGT GCGT ATAACC TTTTTGCTAGTTGCA Patl_3063 3697692 - 3696925 - | glucose-1-phosphate cytidylyltransferase TERM 3510 3697151 - 3697164 + g 70 -2.3 -5.08088 | opp_overlap 3697151 CCGTTAATGGATGAA CCATC ACCC GCTGG TTTTTCTTGGAAATT Patl_3064 3699005 - 3697689 - | glycosyl transferase family protein TERM 3511 3697956 - 3697967 + g 73 -2.2 -5.10154 | GAGTTTTGGCATTTT TTGG AAGA CCGA TTTTTGCTTTTGGCT Patl_3065 3699929 - 3699060 - | glycosyl transferase family protein Patl_3066 3701277 - 3700069 - | glycosyl transferase family protein Patl_3067 3702388 - 3701279 - | methyltransferase type 11 Patl_3068 3703686 - 3702385 - | capsule polysaccharide biosynthesis TERM 3512 3702948 - 3702934 - G 70 -2.1 -5.08601 | opp_overlap 3702936, overlap 3702936 CGAGGCCAATAAAAA CTGCT GACGT AACAG CTTTAAGTCTTGCAA Patl_3069 3704863 - 3703688 - | UDP-galactopyranose mutase Patl_3070 3705817 - 3704864 - | glycosyl transferase family protein Patl_3071 3706628 - 3705903 - | short-chain dehydrogenase/reductase SDR Patl_3072 3707967 - 3706621 - | hypothetical protein Patl_3073 3708227 - 3707967 - | hypothetical protein Patl_3074 3708835 - 3708230 - | hypothetical protein Patl_3075 3709953 - 3708832 - | spore coat polysaccharide biosynthesis protein glycosyltransferase-like TERM 3513 3708958 - 3708978 + g 78 -4.7 -5.00846 | overlap 3708960 GTTTAATAATTCTGG TTGATGCCA CAG TGCCATCGA TTTTTGTACTATTTG TERM 3514 3709034 - 3709048 + g 88 -8.6 -4.77036 | ATTTCAAATGTTGGC TGCTCT TGC AGAGCA TTTTTAATACTCACA Patl_3076 3711010 - 3709943 - | N-acylneuraminate-9-phosphate synthase Patl_3077 3712125 - 3711049 - | hypothetical protein Patl_3078 3712828 - 3712127 - | acylneuraminate cytidylyltransferase Patl_3079 3713975 - 3712839 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3515 3713105 - 3713093 - G 74 -3.3 -4.98255 | overlap 3713094 3713095 GCTCAATCATAAAAA GGTGC CAT GCACT GGTGGCAAGCGTTTC TERM 3516 3713616 - 3713633 + g 73 -4.1 -4.85782 | opp_overlap 3713616 CAATACCTTAGGGAA CTTGCTA CAGT TAGCCAG TTTATTTTTGAGGCC Patl_3080 3714982 - 3713984 - | polysaccharide biosynthesis protein CapD TERM 3517 3714462 - 3714452 - G 77 -6.8 -4.48877 | CAAAGAGCGATAAAA CGGT ACT ACCG AGCCACGAGATCCAA Patl_3081 3715422 - 3715114 - | hypothetical protein Patl_3082 3715850 - 3715419 - | flagellar protein FliS TERM 3518 3715682 - 3715703 + g 74 -8.1 -3.94188 | CTGTGCATCGACCGA TATGCTGAG CTTT TTCAGCATA TTCTTTACGCTCCAT Patl_3083 3717330 - 3715870 - | flagellar hook-associated 2-like Patl_3084 3717795 - 3717355 - | flagellar protein FlaG protein Patl_3085 3718743 - 3717919 - | flagellin-like TERM 3519 3719077 - 3719062 - g 79 -9 -4.02856 | ATAAGAATTGAGAAA CGCCAA GAAG TTGGCG AGAAAATAAAAAAGG TERM 3520 3719112 - 3719091 - g 100 -11.5 -5.86976 | CGAGAAAATAAAAAA GGCCGGGCC AAAT GACCCGACC GAATTGCTCACGTTA Patl_3086 3718777 - 3719160 + | hypothetical protein Patl_3087 3720977 - 3720147 - | flagellin-like TERM 3521 3721226 - 3721245 + r 100 -15 -3.67918 | opp_overlap 3721226 ATAAACGCAAAAAAA GCCGAGGG ATCC CCCTCGGC TTTACGCTCTTACTT TERM 3522 3721245 - 3721226 - R 100 -15 -5.59564 | opp_overlap 3721226 ATAAACGCAAAAAAA GCCGAGGG ATCC CCCTCGGC TTTACGCTCTTACTT TERM 3523 3721381 - 3721356 - R 70 -9.9 -2.72144 | overlap 3721355 GTAGGGTCTCGAAAC CTAGGTTAACT AACC AATTAACCTAG TAAAGATAAAGCTGA Patl_3088 3722197 - 3721373 - | flagellin-like TERM 3524 3722392 - 3722377 - H 74 -9 -3.53012 | opp_overlap 3722377 3722376 3722387, overlap 3722358 3722357 3722387 CGTTTTTTCGTTAAA CGGCAA CGAA TTGCCG CTTTGCAATTGCTAA TERM 3525 3722490 - 3722476 - g 71 -7.8 -3.84887 | overlap 3722477 ATAAAACGTATCAAA CGCGTG ACT CACGCA CATAAACATCACGCA Patl_3089 3722422 - 3723393 + | signal peptide prediction flgL 3724679 - 3723453 - | flagellar hook-associated protein FlgL Patl_3091 3726831 - 3724702 - | flagellar hook-associated protein FlgK Patl_3092 3727668 - 3726859 - | flagellar rod assembly protein/muramidase FlgJ TERM 3526 3727701 - 3727682 - R 75 -7.8 -4.04397 | opp_overlap 3727681, overlap 3727680 ATTTGCACAAAAATA GCCTCGAA CTAC TTCGCGGC CTCTTGCAGTGCCGC flgI 3728971 - 3727859 - | flagellar basal body P-ring protein TERM 3527 3728717 - 3728691 - G 78 -5.1 -5.00616 | opp_overlap 3728704, overlap 3728692 CCTGGCTTTAAAAAA GGCGGCAATTC GGCGT GAACTGCCACA GCAGCCACGTTCTTT flgH 3729677 - 3728985 - | flagellar basal body L-ring protein flgG 3730465 - 3729677 - | flagellar basal body rod protein FlgG TERM 3528 3729851 - 3729824 - G 77 -12 -2.76696 | overlap 3729823 TGCTCCCTGAACAAC CGTGCCTAACCC TTCA AGGCCAGGCACG CCTTGAATTGGCGCG TERM 3529 3730075 - 3730065 - G 73 -2.4 -5.14563 | opp_overlap 3730066, overlap 3730066 GGCTGGAGTAAAAAA CCGG CCC CTGG GGTGACGATTTGCCC Patl_3096 3731270 - 3730527 - | flagellar basal-body rod protein FlgF TERM 3530 3731401 - 3731427 + r 91 -13.8 -2.54803 | opp_overlap 3731406, overlap 3731406 CTTTACTTTGATATG AAAAAGGCCGCA AAT TGCGGCCTTTTA GTATTAATATATTGA TERM 3531 3731422 - 3731406 - R 100 -13.7 -4.8048 | opp_overlap 3731406 3731401 CTTTGATATGAAAAA GGCCGCA AAT TGCGGCC TTTTAGTATTAATAT TERM 3532 3731406 - 3731422 + r 100 -13.7 -4.45399 | opp_overlap 3731406, overlap 3731401 CTTTGATATGAAAAA GGCCGCA AAT TGCGGCC TTTTAGTATTAATAT flgE 3732824 - 3731448 - | flagellar hook protein FlgE flgD 3733525 - 3732839 - | flagellar basal body rod modification protein Patl_3099 3733982 - 3733560 - | flagellar basal-body rod protein FlgC Patl_3100 3734383 - 3733982 - | flagellar basal-body rod protein FlgB TERM 3533 3734458 - 3734480 + r 93 -7.8 -5.44721 | opp_overlap 3734458 GTTAGAGGGAGGATA GCTAACAAAT TGA AATTGTTAGC TTTTTTTAACGTAAT Patl_3101 3735312 - 3734476 - | MCP methyltransferase, CheR-type TERM 3534 3734584 - 3734600 + g 70 -2.2 -5.07567 | AAGAACACCTTGTGG TTGCAG GCAAG CGGCAA TTTTTTGCAGTATCG Patl_3102 3736249 - 3735329 - | response regulator receiver modulated CheW protein flgA 3736403 - 3737113 + | flagellar basal body P-ring biosynthesis protein FlgA TERM 3535 3737443 - 3737432 - g 82 -7.2 -4.78839 | overlap 3737434 AAGTGCAGAAGAAAA GCGC CGAA GCGC CAGTGAATCAGGAAA Patl_3104 3737242 - 3737568 + | anti-sigma-28 factor, FlgM Patl_3105 3737612 - 3738040 + | FlgN TERM 3536 3738204 - 3738194 - T 75 -5.4 -4.77757 | overlap 3738150 3738149 3738197 GTGTAAAAACGAAAA GAGT CAG ACTC TGATACAACTAATTT Patl_3106 3738804 - 3738337 - | hypothetical protein TERM 3537 3739249 - 3739231 - g 70 -2.3 -5.08824 | gap 1, opp_overlap 3739246, overlap 3739233 GCCTTAGCCAAAAAA CAGGCCAC TCAA GAGGCC-G TTAAACAGGCATTAA TERM 3538 3739481 - 3739467 - g 74 -3.5 -4.91511 | AGCGCAGTATAAAAA GCGCT TGGTC AGCAC TTGGTTCCCTATTCG Patl_3107 3739147 - 3740253 + | putative lipoprotein TERM 3539 3740347 - 3740327 - T 78 -7.5 -4.4715 | opp_overlap 3740327, overlap 3740330 GTTTAATGGATAAAA CGAGCCCCT CCT AAGGGCTAG ATCTTGGTTCGATTC TERM 3540 3740619 - 3740590 - T 82 -10.7 -3.5393 | opp_overlap 3740615, overlap 3740592 ACCACTTTGTTCAAA TATGCCCAGGGGC TTGT GCCCCTAAGCATG ACGTTTATGCGTCTT TERM 3541 3740617 - 3740592 - T 93 -13.3 -3.34715 | opp_overlap 3740615, overlap 3740590 CACTTTGTTCAAATA TGCCCAGGGGC TTGT GCCCCTAAGCA TGACGTTTATGCGTC Patl_3108 3741580 - 3740624 - | hypothetical protein TERM 3542 3744278 - 3744295 + G 72 -8.5 -3.71075 | opp_overlap 3744278, overlap 3744276 ATCTGGCTCGTACAA CGTAAGT AACG ACTTACG TGTTTTCGCTCGTAT Patl_3109 3742197 - 3744413 + | TonB-dependent receptor TERM 3543 3744459 - 3744498 + F 93 -10.2 -5.00196 | ATAAGCTATATCGCA CATCGCCTTACATTTG AAGTCAAC CAAATCTAAGGCGGTG TTTTATTCTTTACGA TERM 3544 3744920 - 3744931 + G 72 -3 -5.01823 | CTCTGGCCCTTCTTG GTTA GCGT TAAC TTTTATTATTATTAT Patl_3110 3744696 - 3745529 + | hypothetical protein TERM 3545 3745583 - 3745614 + T 100 -16.2 -3.16079 | opp_overlap 3745591, overlap 3745591 TCATGTTTACTTATA TTAAAAAAGGAGAC CTAG GTCTCCTTTTTTAA TTGGATCGTTATCTT TERM 3546 3745606 - 3745591 - T 93 -9 -5.22312 | opp_overlap 3745583 3745591 ACTTATATTAAAAAA GGAGAC CTAG GTCTCC TTTTTTAATTGGATC TERM 3547 3745591 - 3745606 + T 93 -9 -5.28481 | opp_overlap 3745591, overlap 3745583 ACTTATATTAAAAAA GGAGAC CTAG GTCTCC TTTTTTAATTGGATC Patl_3111 3747549 - 3745648 - | peptidase M1, membrane alanine aminopeptidase Patl_3112 3747724 - 3748308 + | Smr protein/MutS2 TERM 3548 3748407 - 3748424 + T 74 -4.1 -5.05301 | TTGATCAAGCACATC AAAACGG CAGT CCGTTTA TTTTTCTGCTTGTTT TERM 3549 3748786 - 3748798 + T 70 -2.7 -5.04249 | AAAAAATTTCTCTTT CGAAA ACG TTTTG TTTGTTTTTTAAACA TERM 3550 3748887 - 3748902 + T 77 -10.4 -3.34244 | opp_overlap 3748887, overlap 3748885 3748883 AAGAAAATCAAAAAA GCCCCA AATC TGGGGC TCTCTTTATCGGGTG TERM 3551 3748902 - 3748887 - T 100 -10.4 -5.52347 | opp_overlap 3748887 3748885 3748883 AAGAAAATCAAAAAA GCCCCA AATC TGGGGC TCTCTTTATCGGGTG Patl_3113 3752836 - 3748949 - | phosphoribosylformylglycinamidine synthase TERM 3552 3750195 - 3750205 + g 78 -5.4 -4.8622 | opp_overlap 3750195 GAGCGGTCATGATAA GCAT GTA ATGC TTTTTCATTCACCAA TERM 3553 3750966 - 3750982 + g 72 -5.8 -4.50058 | opp_overlap 3750960, overlap 3750960 TTGCTAACATCAAAT GCGTTG CCCGT CAGCGC TTTTGATTGTACATC TERM 3554 3751547 - 3751558 + g 78 -5.8 -4.74453 | overlap 3751540 AAGCTTGGCCCCAAC GGTG ATTT CACC TTTTTGAGTATGTTG Patl_3114 3753171 - 3754742 + | lytic transglycosylase, catalytic Patl_3115 3755789 - 3755301 - | CMP/dCMP deaminase, zinc-binding Patl_3116 3755996 - 3756229 + | hypothetical protein TERM 3555 3756298 - 3756241 - T 93 -10.7 -5.1287 | gap 1, opp_overlap 3756243 3756245 3756257, overlap 3756243 3756257 CTGAGACCTAAAAAA TCCGCTCAAC-GAAAAAGGGCCACCTCA TAT TGAGTTGGCCCTTTTTTTGTTGAGTCGT TATCCTGAACCTATT TERM 3556 3756297 - 3756243 - T 100 -17.5 -2.79476 | gap 2, opp_overlap 3756243 3756245 3756257, overlap 3756241 3756257 GAGACCTAAAAAATC CG-CTCAAC-GAAAAAGGGCCACCTCA TAT TGAGTTGGCCCTTTTTTTGTTGAGTCG TTATCCTGAACCTAT TERM 3557 3756243 - 3756297 + T 100 -19.7 -3.41229 | gap 2, opp_overlap 3756241 3756243 3756257, overlap 3756245 3756257 GAGACCTAAAAAATC CG-CTCAAC-GAAAAAGGGCCACCTCA TAT TGAGTTGGCCCTTTTTTTGTTGAGTCG TTATCCTGAACCTAT TERM 3558 3756245 - 3756294 + T 100 -21.1 -2.86271 | gap 1, opp_overlap 3756243 3756241 3756257, overlap 3756243 3756257 GACCTAAAAAATCCG CTCAAC-GAAAAAGGGCCACCTCA TAT TGAGTTGGCCCTTTTTTTGTTGAG TCGTTATCCTGAACC TERM 3559 3756281 - 3756257 - T 100 -14.3 -4.8622 | opp_overlap 3756257 3756245 3756243, overlap 3756243 3756241 CCGCTCAACGAAAAA GGGCCACCTCA TAT TGAGTTGGCCC TTTTTTTGTTGAGTC TERM 3560 3756257 - 3756281 + T 100 -14.3 -5.8187 | opp_overlap 3756243 3756241 3756257, overlap 3756245 3756243 CCGCTCAACGAAAAA GGGCCACCTCA TAT TGAGTTGGCCC TTTTTTTGTTGAGTC Patl_3117 3757436 - 3756309 - | hypothetical protein Patl_3118 3758107 - 3757574 - | YaeQ TERM 3561 3757812 - 3757825 + g 77 -3.8 -5.15634 | ACTTTGGTATTTTTG GCCA TGCGAC TGGC TTTTTTGATCCGCTC TERM 3562 3758172 - 3758142 - R 100 -14.2 -4.69326 | opp_overlap 3758149, overlap 3758146 ATATTGAATACAAAA TAAATAAGGCCAGC GAT ACTGGCCTTATTCA CAACAAAAGCTATTC TERM 3563 3758168 - 3758146 - R 100 -12.8 -4.88163 | opp_overlap 3758149, overlap 3758142 TGAATACAAAATAAA TAAGGCCAGC GAT ACTGGCCTTA TTCACAACAAAAGCT TERM 3564 3758149 - 3758165 + r 77 -9.4 -3.61398 | opp_overlap 3758146 3758142 ATACAAAATAAATAA GGCCAG CGATA CTGGCC TTATTCACAACAAAA guaA 3759759 - 3758182 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3565 3759529 - 3759514 - G 71 -6.8 -4.02719 | overlap 3759516 GTAGCAAATACCAAA TACGGG GACC CCCGCA TCAAAGACATATTGC TERM 3566 3759817 - 3759799 - R 100 -13.2 -5.60993 | GTGGCGATAAAAAAA GGCTGGTT AAA AACCAGCC CAGTAGTCAGTTTAA Patl_3120 3761306 - 3759837 - | inositol-5-monophosphate dehydrogenase Patl_3121 3761410 - 3762744 + | exodeoxyribonuclease VII, large subunit TERM 3567 3762812 - 3762779 - T 100 -12.6 -5.04601 | opp_overlap 3762779 CCTAGAAACGAAAAA GCCCCCTTAATC TTTGTTAATC GATTAAGGGGGC TTTTTTTGCAAAGCA TERM 3568 3762779 - 3762812 + T 100 -12.6 -5.40072 | opp_overlap 3762779 CCTAGAAACGAAAAA GCCCCCTTAATC TTTGTTAATC GATTAAGGGGGC TTTTTTTGCAAAGCA engA 3764315 - 3762867 - | GTP-binding protein EngA TERM 3569 3764362 - 3764340 - R 91 -12 -3.92659 | opp_overlap 3764340 3764339 TCCTTAAAACGCAAA CGGCTCAGGA ACA TCCCAAGCCG ATTAATATTATCAAC Patl_3123 3765650 - 3764403 - | outer membrane protein assembly complex subunit YfgL TERM 3570 3764622 - 3764638 + g 72 -8.7 -3.67141 | opp_overlap 3764622 AGCAGCGGTAAGCAA GCGCTTT TTA AGAGCGC TTTGACTCCACTTCT Patl_3124 3766266 - 3765643 - | TPR-like domain-containing protein TERM 3571 3765724 - 3765738 + g 71 -7.8 -3.87869 | CGCCACTGCTGCACT GTACGC ACT GCGTGC TTTATCAAACATTCC Patl_3125 3767614 - 3766334 - | histidyl-tRNA synthetase TERM 3572 3767667 - 3767650 - R 80 -6.3 -4.79826 | gap 1, opp_overlap 3767649 3767650 AGATAGTATTAAAAA GCCCCGTA TTA TA-GGGGC GTTGTAGGTAAACGT Patl_3126 3768846 - 3767728 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Patl_3127 3769962 - 3768925 - | XRE family transcriptional regulator Patl_3128 3770997 - 3769999 - | type IV pilus biogenesis/stability protein PilW TERM 3573 3770131 - 3770109 - G 75 -6.2 -4.45117 | TATATTGCAAAGAAA GGCGATAAAG ATT CTCCTTCGCC GTAACAACGTGATAT TERM 3574 3770690 - 3770703 + g 81 -3.8 -5.37043 | overlap 3770686 TCGGCATTTTTAGGC GCCA ACGCCA TGGC TTTTTTATATGACGT Patl_3129 3772151 - 3771009 - | hypothetical protein TERM 3575 3772261 - 3772246 - R 89 -10.4 -4.16943 | opp_overlap 3772246 GTTTAGATCGCAAAA GGGAGC CTAA GCTCCC TTACTTACAAACATT TERM 3576 3772246 - 3772261 + r 77 -10.4 -3.34192 | opp_overlap 3772246 GTTTAGATCGCAAAA GGGAGC CTAA GCTCCC TTACTTACAAACATT Patl_3130 3772715 - 3772284 - | nucleoside-diphosphate kinase Patl_3131 3772931 - 3773104 + | membrane protein TERM 3577 3773162 - 3773135 - T 91 -12.2 -4.01454 | opp_overlap 3773135 3773142, overlap 3773142 CGAAAAAGAAGACAA CAAAAAAGGAGC CGAA GCTCCTTTTTTA TCTTTCAGATAACGC TERM 3578 3773135 - 3773162 + T 77 -10 -3.38046 | opp_overlap 3773135 3773142, overlap 3773142 CGAAAAAGAAGACAA CAAAAAAGGAGC CGAA GCTCCTTTTTTA TCTTTCAGATAACGC TERM 3579 3773155 - 3773142 - T 100 -8.1 -5.64304 | opp_overlap 3773135 3773142, overlap 3773135 GAAGACAACAAAAAA GGAGC CGAA GCTCC TTTTTTATCTTTCAG TERM 3580 3773142 - 3773155 + T 100 -8.1 -5.56264 | opp_overlap 3773142 3773135, overlap 3773135 GAAGACAACAAAAAA GGAGC CGAA GCTCC TTTTTTATCTTTCAG Patl_3132 3775061 - 3773178 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3581 3773237 - 3773223 - G 72 -6.4 -4.25056 | overlap 3773224 CAGTGCATTAACAAA CTCACC ATA GGTGAA CTGTGCTCGCATTGT TERM 3582 3775214 - 3775185 - R 93 -12.3 -4.13591 | opp_overlap 3775190 3775209, overlap 3775190 TTAACAGCAGATAAA CAAAAGGCGATGA TAAA TCATCGCCTTTTT TTTGGAAAAGCTTTG TERM 3583 3775190 - 3775209 + r 100 -12.2 -5.75342 | opp_overlap 3775185 3775190 AGCAGATAAACAAAA GGCGATGA TAAA TCATCGCC TTTTTTTTGGAAAAG TERM 3584 3775209 - 3775190 - R 100 -12.2 -5.06016 | opp_overlap 3775190, overlap 3775185 AGCAGATAAACAAAA GGCGATGA TAAA TCATCGCC TTTTTTTTGGAAAAG Patl_3133 3775503 - 3775231 - | histone-like DNA-binding protein Patl_3134 3778108 - 3775742 - | ATP-dependent protease La TERM 3585 3777716 - 3777706 - G 71 -6.8 -4.02132 | CTTCAAACTGAGAAA TCGC TGA GCGA ATAATGACTTCTTGC TERM 3586 3778338 - 3778309 - R 100 -18.1 -4.27519 | opp_overlap 3778309 3778316 ATCTGATAACAGAAA TAGTAAAGGCTCC CTTA GGAGCCTTTACTA TTTAAAACGCATTGG TERM 3587 3778309 - 3778338 + r 100 -18.1 -3.54459 | opp_overlap 3778309, overlap 3778316 ATCTGATAACAGAAA TAGTAAAGGCTCC CTTA GGAGCCTTTACTA TTTAAAACGCATTGG TERM 3588 3778316 - 3778331 + r 86 -10.4 -4.00532 | opp_overlap 3778309, overlap 3778309 AACAGAAATAGTAAA GGCTCC CTTA GGAGCC TTTACTATTTAAAAC TERM 3589 3778358 - 3778368 + r 76 -3.2 -5.26316 | opp_overlap 3778366 AAACGCATTGGTTAT TCCG AAA TGGA TTTTTTATCCGCTGC clpX 3779631 - 3778354 - | ATP-dependent protease ATP-binding subunit TERM 3590 3779540 - 3779529 - G 70 -2.2 -4.9792 | opp_overlap 3779536 CATCGCATACAAAAA CTGA CGGG CCAG CGATGAGCTTTCTCA Patl_3136 3780360 - 3779722 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 3591 3780403 - 3780384 - R 100 -12.2 -5.38054 | opp_overlap 3780384 CTTCACAAATAAAAA TGCTCGGT ATTT ACCGAGCA TTTAAGCAGTTGCAG TERM 3592 3780384 - 3780403 + r 89 -12.2 -3.57561 | opp_overlap 3780384 CTTCACAAATAAAAA TGCTCGGT ATTT ACCGAGCA TTTAAGCAGTTGCAG tig 3781758 - 3780448 - | trigger factor TERM 3593 3781147 - 3781159 + g 73 -7.7 -4.07568 | TTCGCCAGCTTTAGC GCCAA CGA TTGGC TTTTCAAAACCAGGG TERM 3594 3782273 - 3782295 + r 71 -9.8 -2.88544 | overlap 3782276 GATTCGAACCTGCGA CCACCCGCTT AGA AGGCGGGTGC TCTATCCAGCTGAGC TERM 3595 3782276 - 3782292 + r 72 -10.1 -2.69468 | overlap 3782273 TCGAACCTGCGACCA CCCGCTT AGA AGGCGGG TGCTCTATCCAGCTG Patl_3138 3783303 - 3782671 - | hypothetical protein TERM 3596 3782970 - 3782948 - G 95 -2.7 -5.84381 | gap 1, overlap 3782951 TCAGTAAGAAAAAAA TAAGCGCGAC GCGG GTCG-GCTGA GACTTTCATAAAGCG TERM 3597 3782967 - 3782951 - G 76 -4.4 -4.96435 | gap 1, overlap 3782948 GTAAGAAAAAAATAA GCGCGAC GCGG GTCG-GC TGAGACTTTCATAAA TERM 3598 3783637 - 3783662 + G 71 -7.6 -3.93695 | opp_overlap 3783631 3783635 3783634 3783653, overlap 3783641 TGTGACCAACAAGCG CAGAGCCTGC GAAGAA GTAGGCTTTG TTTCTAAATCCTACG TERM 3599 3783641 - 3783658 + G 72 -4.8 -4.57482 | opp_overlap 3783631 3783635 3783634 3783653, overlap 3783637 ACCAACAAGCGCAGA GCCTGC GAAGAA GTAGGC TTTGTTTCTAAATCC Patl_3139 3783473 - 3784330 + | methenyltetrahydrofolate cyclohydrolase Patl_3140 3784347 - 3784907 + | hypothetical protein TERM 3600 3784905 - 3784926 + T 73 -8.8 -3.65529 | opp_overlap 3784905 3784908, overlap 3784908 CTGAGCCCTGTTAAA TAAGGCAG AGTACA CTGCCTTA TTTGGCTAACGCTGT TERM 3601 3784926 - 3784905 - T 72 -8.8 -3.53811 | opp_overlap 3784905 3784908, overlap 3784908 CTGAGCCCTGTTAAA TAAGGCAG AGTACA CTGCCTTA TTTGGCTAACGCTGT Patl_3141 3785996 - 3784956 - | hypothetical protein Patl_3142 3787873 - 3785993 - | hypothetical protein TERM 3602 3786790 - 3786811 + g 74 -3.6 -5.00616 | overlap 3786786 3786791 GAATAAGCGTAGCCC AGCGCTGG CCTGTA CTAGCGCC TTTTTTGAAAACCCC Patl_3143 3788610 - 3787876 - | ABC-2 type transporter Patl_3144 3789533 - 3788613 - | ABC transporter related Patl_3145 3789674 - 3790387 + | hypothetical protein Patl_3146 3791154 - 3790384 - | TatD-related deoxyribonuclease Patl_3147 3791808 - 3791167 - | pyridoxamine 5'-phosphate oxidase Patl_3148 3792788 - 3791886 - | GTP-binding protein Era TERM 3603 3792680 - 3792695 + g 72 -4.7 -4.62069 | TAGTTTGCGGTTTTC GTGAG GTAATG CTCAC TTTTTGGCCTAGAAG Patl_3149 3793464 - 3792781 - | ribonuclease III Patl_3150 3794370 - 3793465 - | signal peptidase I Patl_3151 3796167 - 3794371 - | GTP-binding protein LepA Patl_3152 3796854 - 3796351 - | positive regulator of sigma E, RseC/MucC TERM 3604 3796490 - 3796478 - G 74 -3.3 -5.03314 | TTCACGCCTAAAAAA CTGAC AAC GGCAG CGACCATGGAAGATA Patl_3153 3797857 - 3796856 - | sigma E regulatory protein, MucB/RseB TERM 3605 3797246 - 3797260 + g 74 -8.6 -4.00122 | AGGCTGCTCTGTGAC GTGACA TGC TGTCAC TTGTATTTGTTCTAG TERM 3606 3797795 - 3797807 + g 72 -6.3 -4.35461 | TGACGCTGGAAGGTC TACAG ACA CTGTA TTTTGGTCGTCTTCG TERM 3607 3797886 - 3797853 - G 82 -7.5 -4.60808 | gap 1, opp_overlap 3797857, overlap 3797855 CTAGAAAAAGATAAA GACACTAGGCAGGCAA GCG TAACCTGCCTAATG-C ATTGGAAAGATTTAT TERM 3608 3797885 - 3797855 - G 87 -11.2 -3.88932 | opp_overlap 3797857, overlap 3797853 AGAAAAAGATAAAGA CACTAGGCAGGCAA GCG TAACCTGCCTAATG CATTGGAAAGATTTA Patl_3154 3798500 - 3797898 - | sigma-E factor negative regulatory protein Patl_3155 3799215 - 3798637 - | RNA polymerase sigma factor RpoE TERM 3609 3799512 - 3799498 - g 75 -11.4 -2.94199 | GACGTACTAATTATA GGCAGC GGC GCTGCC GGACTTAGCCTAGCA TERM 3610 3800236 - 3800247 + G 71 -3.6 -4.82901 | overlap 3800232 AGTGAAGCTCTGCGC GGTG AAGG CGCC TTTTTATGCCACGCA Patl_3156 3799456 - 3801060 + | L-aspartate oxidase Patl_3157 3802025 - 3801063 - | MaoC-like dehydratase Patl_3158 3802467 - 3802048 - | hypothetical protein Patl_3159 3802741 - 3802490 - | hypothetical protein Patl_3160 3802899 - 3803858 + | glycine cleavage T protein (aminomethyl transferase) Patl_3161 3803927 - 3804412 + | peptidylprolyl isomerase, FKBP-type TERM 3611 3804469 - 3804486 + T 100 -12.7 -5.26918 | opp_overlap 3804469 GGTAATAAACACAAA CGAGGCC AAAT GGCCTCG TTTTTTATAGCATGT TERM 3612 3804486 - 3804469 - T 100 -12.7 -4.46072 | opp_overlap 3804469 GGTAATAAACACAAA CGAGGCC AAAT GGCCTCG TTTTTTATAGCATGT Patl_3162 3804855 - 3804517 - | nitrogen regulatory protein P-II nadE 3805710 - 3804880 - | NAD synthetase Patl_3164 3807473 - 3805809 - | prepilin-type cleavage/methylation-like TERM 3613 3806216 - 3806202 - G 75 -10 -3.59979 | opp_overlap 3806202 GGCTGCTAGTTGAAA TTGCCC TAG GGGCAA TGTGATATCCCGTCC Patl_3165 3808610 - 3807474 - | hypothetical protein TERM 3614 3807900 - 3807884 - G 73 -8 -4.09685 | CTTCACTCTTTAAAA TGTGCC AGTCA GGCACA GGTATATTGAACAGG Patl_3166 3809232 - 3808600 - | prepilin-type cleavage/methylation-like Patl_3167 3809687 - 3809226 - | hypothetical protein Patl_3168 3809971 - 3810363 + | prepilin-type cleavage/methylation Patl_3169 3810459 - 3811031 + | prepilin-type cleavage/methylation Patl_3170 3811523 - 3811056 - | prepilin-type cleavage/methylation TERM 3615 3811515 - 3811528 + g 73 -4.5 -4.79657 | CGCCATTCTCGAGGG GGTGT TCAT ACGCC TTTTATTCATCTTCT Patl_3171 3815625 - 3811531 - | Tfp pilus assembly protein tip-associated adhesin PilY1-like Patl_3172 3816224 - 3815622 - | hypothetical protein TERM 3616 3816069 - 3816082 + g 70 -2.3 -5.09259 | AAGTGTTTGCGTTTG TAGCG ATAC CGCCA TTTTATTTTGCAATA Patl_3173 3817087 - 3816221 - | prepilin-type cleavage/methylation-like Patl_3174 3817674 - 3817099 - | hypothetical protein TERM 3617 3817887 - 3817925 + r 75 -5.5 -4.7373 | gap 1, opp_overlap 3817890, overlap 3817890 GACAGCAGATATAAA AAAGTCGCTA-AAGAG AAATAAAG CTCTTTTAGCGACTTG TTTTTCGTGACGTGC TERM 3618 3817922 - 3817890 - R 93 -7.2 -5.43414 | gap 1, opp_overlap 3817887 3817890 AGCAGATATAAAAAA GTCGCTA-AAGAG AAATAAAG CTCTTTTAGCGAC TTGTTTTTCGTGACG TERM 3619 3817890 - 3817922 + r 78 -7.2 -4.47707 | gap 1, opp_overlap 3817890, overlap 3817887 AGCAGATATAAAAAA GTCGCTA-AAGAG AAATAAAG CTCTTTTAGCGAC TTGTTTTTCGTGACG Patl_3175 3818917 - 3817973 - | hydroxymethylbutenyl pyrophosphate reductase TERM 3620 3818945 - 3818979 + r 82 -10.8 -3.57144 | overlap 3818948 TGTTAACTCTTGCTT TGAGCTCAGTGGCGTA AGT TACGCTACTGAGATAA TTTCGACATCAAAGG TERM 3621 3818948 - 3818976 + r 83 -12.5 -2.91695 | overlap 3818945 TAACTCTTGCTTTGA GCTCAGTGGCGTA AGT TACGCTACTGAGA TAATTTCGACATCAA Patl_3176 3819406 - 3818963 - | peptidylprolyl isomerase, FKBP-type TERM 3622 3819261 - 3819246 - G 76 -9 -3.69618 | CTTAATCCCAAAAGA CAGGCT TCGA AGCCTG GGGTCAAATTACCAT Patl_3177 3819893 - 3819399 - | lipoprotein signal peptidase TERM 3623 3819552 - 3819538 - G 73 -4.2 -4.81863 | AAATCGATAACAAAA CCGTGT AAT AAACGG TCAAACACATTGCCG TERM 3624 3819620 - 3819594 - G 83 -6.6 -5.03713 | gap 1, opp_overlap 3819593 3819611 AATAATCAAACAAAA CGCC-ACAGGC AACATA ACCTGTTGGCG GGTGGTTTCTTTTAA Patl_3178 3822714 - 3819886 - | isoleucyl-tRNA synthetase TERM 3625 3821359 - 3821375 + g 75 -6.5 -4.53707 | GCGGCTTTCGCCCCA CTCAGGG ATC CACTGAG TTTTATGAATTTCTT TERM 3626 3822566 - 3822576 + g 76 -4.6 -5.00616 | opp_overlap 3822561 TCATGCAAGATAAAA GGCG TTT TGCC TTTTTTAGCAGCGCG Patl_3179 3823682 - 3822756 - | riboflavin biosynthesis protein RibF Patl_3180 3825449 - 3823878 - | integral membrane protein MviN TERM 3627 3824907 - 3824897 - G 78 -5.4 -4.83615 | opp_overlap 3824904 TATCCGCCATAAAAA TAGC ACA GCTA ATAATGGCTACATTT Patl_3181 3825927 - 3826190 + | ribosomal protein S20 TERM 3628 3826232 - 3826221 - f 86 -7.2 -5.03314 | opp_overlap 3826221 3826226 3826228 TTTATTGTCAAAAAA GCGC TTAG GCGC TTTTTTTGTGCCTAT TERM 3629 3826221 - 3826232 + F 100 -7.2 -5.65177 | opp_overlap 3826221, overlap 3826226 3826228 TTTATTGTCAAAAAA GCGC TTAG GCGC TTTTTTTGTGCCTAT TERM 3630 3826735 - 3826763 + G 90 -13.9 -3.36327 | opp_overlap 3826742 TTGTATCGTTCGCTT GCACTAACCGGCA CCT TGCTGGTCAGTGC TTGTGCATCAACTGA TERM 3631 3827150 - 3827140 - g 74 -6.8 -4.25256 | GCTTCATTAAAACAA GCTG ACG CAGC GCAAGTAGATGGAAA TERM 3632 3827922 - 3827938 + G 76 -7.9 -4.2074 | opp_overlap 3827925, overlap 3827923 GTCAATGCTCCCCAA GCACGGG GTG CCCGTGG TTTCTCTGTTACAAG TERM 3633 3827923 - 3827937 + G 77 -11.4 -3.11962 | opp_overlap 3827925, overlap 3827922 TCAATGCTCCCCAAG CACGGG GTG CCCGTG GTTTCTCTGTTACAA Patl_3182 3826705 - 3828123 + | peptidase M28 TERM 3634 3828185 - 3828159 - T 100 -12.3 -5.37043 | opp_overlap 3828159 ATTTCACACAAAAAA GGCGAGGTGTC GACAT GACATCTCGCC TTTTTAATGGCTTAA TERM 3635 3828159 - 3828185 + T 100 -15.2 -4.77157 | opp_overlap 3828159 ATTTCACACAAAAAA GGCGAGGTGTCG ACA TGACATCTCGCC TTTTTAATGGCTTAA Patl_3183 3828671 - 3828225 - | flavodoxin/nitric oxide synthase Patl_3184 3829463 - 3828705 - | pseudouridylate synthase Patl_3185 3829819 - 3829463 - | hypothetical protein TERM 3636 3829703 - 3829683 - G 81 -8.3 -4.51174 | CGATCACAAGCAAAA GGCAATTCA CTT TGCATTGCC CACTGTGATGGCGGG Patl_3186 3829879 - 3830904 + | hypothetical protein Patl_3187 3830901 - 3831206 + | hypothetical protein TERM 3637 3831309 - 3831266 - T 100 -17.6 -3.89822 | opp_overlap 3831273, overlap 3831267 TATTGAGCCCAGAAA CTGCAAAGGCGCGGCCTGAA TCAT TTCAAGCCACGCCTTTACAT AAAAATTGAAGGTCC TERM 3638 3831308 - 3831267 - T 100 -21.1 -2.93572 | opp_overlap 3831273, overlap 3831266 ATTGAGCCCAGAAAC TGCAAAGGCGCGGCCTGAA TCAT TTCAAGCCACGCCTTTACA TAAAAATTGAAGGTC TERM 3639 3831273 - 3831302 + T 89 -12.1 -3.65827 | opp_overlap 3831267 3831266 CCCAGAAACTGCAAA GGCGCGGCCTGAA TCAT TTCAAGCCACGCC TTTACATAAAAATTG TERM 3640 3832020 - 3832056 + T 73 -7.4 -4.08706 | gap 1, overlap 3832018 TAAAATGACTTTATC CTACA-CCCTTGTACGA AATC TCTTACAAGGGGTGGAG TTTATATCCTAACGC Patl_3188 3832809 - 3832165 - | hypothetical protein TERM 3641 3832216 - 3832226 + g 74 -5.4 -4.66938 | ATGTCCTGTTTCTAA TGCT TCG AGCA TTTTATATTGCCCAT Patl_3189 3832923 - 3833153 + | hypothetical protein TERM 3642 3833192 - 3833220 + T 93 -12.6 -3.89956 | opp_overlap 3833191 3833190 3833194, overlap 3833194 GCTCGTACAATAATT TACATCATGCTC ATAGC GAGCATGATGTG TTTGATATCTACTGA TERM 3643 3833194 - 3833218 + T 95 -13 -3.53419 | opp_overlap 3833191 3833190 3833194, overlap 3833192 TCGTACAATAATTTA CATCATGCTC ATAGC GAGCATGATG TGTTTGATATCTACT TERM 3644 3833218 - 3833194 - T 91 -13.7 -2.68806 | opp_overlap 3833194 3833192, overlap 3833191 3833190 TCGTACAATAATTTA CATCATGCTCA TAG CGAGCATGATG TGTTTGATATCTACT Patl_3190 3833597 - 3833229 - | hypothetical protein Patl_3191 3833788 - 3834078 + | hypothetical protein Patl_3192 3834643 - 3834083 - | SecY interacting protein Syd queF 3834770 - 3835609 + | 7-cyano-7-deazaguanine reductase TERM 3645 3836524 - 3836510 - g 72 -2.8 -4.91657 | AATGAAGAAAATAAA GAGCAA GTG TTACCC ATCATTCTTACCGGC Patl_3194 3835682 - 3837037 + | hypothetical protein TERM 3646 3837421 - 3837431 + G 71 -6.8 -4.17762 | CACAACTCAGGATGA GTGC ACA GCAC TTCTTTTGCAGAATG Patl_3195 3837125 - 3837499 + | SmpA/OmlA family lipoprotein Patl_3196 3837514 - 3839271 + | putative signal transduction protein TERM 3647 3839657 - 3839639 - g 76 -5.2 -4.86385 | overlap 3839643 ATCGCTAAAAATAAA GTCACCCT AAA AGGGCCAC TAACCACACCCGTTG Patl_3197 3839447 - 3840454 + | isocitrate dehydrogenase TERM 3648 3840497 - 3840478 - f 75 -7.8 -3.97947 | opp_overlap 3840479, overlap 3840479 TCTATTTATTACAAA GGGGACTC TACT GAGTCCCT TTTTTTCGCTTAGCA TERM 3649 3840479 - 3840496 + F 100 -11.3 -5.53288 | opp_overlap 3840478 3840479 CTATTTATTACAAAG GGGACTC TACT GAGTCCC TTTTTTTCGCTTAGC TERM 3650 3840496 - 3840479 - f 81 -11.3 -2.98447 | opp_overlap 3840479, overlap 3840478 CTATTTATTACAAAG GGGACTC TACT GAGTCCC TTTTTTTCGCTTAGC Patl_3198 3840613 - 3840921 + | helix-hairpin-helix repeat-containing competence protein ComEA TERM 3651 3840947 - 3840983 + T 93 -13.9 -2.96366 | opp_overlap 3840952, overlap 3840952 AAGATTAAGGCATAA AAAAAGCCCCGTGAT AGAAAAC ATCACGGGGCTTTTC ATTTAATTAAGTATG TERM 3652 3840952 - 3840978 + T 100 -13.8 -4.62054 | opp_overlap 3840952, overlap 3840947 TAAGGCATAAAAAAA GCCCCGTGAT AGAAAAC ATCACGGGGC TTTTCATTTAATTAA TERM 3653 3840978 - 3840952 - T 100 -14.5 -5.66684 | opp_overlap 3840952 3840947 TAAGGCATAAAAAAA GCCCCGTGATA GAAAA CATCACGGGGC TTTTCATTTAATTAA Patl_3199 3841895 - 3841002 - | UTP-glucose-1-phosphate uridylyltransferase Patl_3200 3843237 - 3841897 - | UDP-glucose 6-dehydrogenase TERM 3654 3843455 - 3843440 - H 79 -4.8 -5.055 | GGAATGCCTAAAAAA TAAATG AAAC CATTTA ACCAAAGAACATCTA TERM 3655 3843959 - 3843945 - g 71 -7.2 -4.02817 | opp_overlap 3843947 TTGGCACAACAACAA CTGTTA CCG TAACAG GTACTGGTTCTATGA Patl_3201 3843668 - 3844024 + | hypothetical protein TERM 3656 3844046 - 3844063 + F 100 -9.8 -5.57396 | opp_overlap 3844046, overlap 3844050 TTAAAAGTTTTAAAA GCCGCC AATAAA GGCGGC TTTTTTATTGGTTAT TERM 3657 3844063 - 3844046 - f 89 -9.8 -4.19276 | opp_overlap 3844046 3844050 TTAAAAGTTTTAAAA GCCGCC AATAAA GGCGGC TTTTTTATTGGTTAT Patl_3202 3844112 - 3844786 + | hypothetical protein Patl_3203 3844805 - 3845548 + | hypothetical protein Patl_3204 3845545 - 3847674 + | protein of unknown function DUF940, membrane lipoprotein putative TERM 3658 3847725 - 3847695 - T 86 -7.6 -5.16132 | opp_overlap 3847694 3847693, overlap 3847697 CAGAGCAAAACAAAA TACATCTGGCGA ACTCCCG CCGCCAGATGTG CCATTTTTTCTGACG TERM 3659 3847723 - 3847697 - T 89 -10.2 -4.18807 | opp_overlap 3847694 3847693, overlap 3847695 GAGCAAAACAAAATA CATCTGGCGA ACTCCCG CCGCCAGATG TGCCATTTTTTCTGA Patl_3205 3848729 - 3847863 - | rhamnosyltransferase Patl_3206 3849502 - 3848726 - | glycosyltransferase Patl_3207 3851569 - 3849839 - | glycosyl transferase family protein TERM 3660 3850163 - 3850150 - G 72 -6.7 -4.25283 | overlap 3850130 3850155 ACTTTTTGACTAAAA GACAG GCAG CTGTC ACTGCACTAAAATTA Patl_3208 3852736 - 3851639 - | hypothetical protein TERM 3661 3852883 - 3852855 - R 80 -10.3 -3.70469 | opp_overlap 3852870, overlap 3852858 AATGATAACGTTAAA CTAGCTCTTCAAC GGC GCTGAAGAGCCGG ACGCATTTTAGCGTG TERM 3662 3852880 - 3852858 - R 84 -12.8 -2.95126 | opp_overlap 3852870, overlap 3852855 GATAACGTTAAACTA GCTCTTCAAC GGC GCTGAAGAGC CGGACGCATTTTAGC Patl_3209 3854097 - 3852928 - | hypothetical protein Patl_3210 3855277 - 3854192 - | hypothetical protein TERM 3663 3854245 - 3854221 - G 79 -2.9 -5.41143 | overlap 3854244 TACTCTTTAAAAAAA TCTTCTTGATT TTT AACCACAAAGA CTGAGATTTCACATG TERM 3664 3854957 - 3854967 + g 72 -3.2 -5.08169 | opp_overlap 3854946 3854956, overlap 3854958 ATAAGCAATAAACTT TGCC GAA GGTA TTTTTTCGGCTATAT Patl_3211 3855686 - 3855288 - | cytidyltransferase-like protein TERM 3665 3855541 - 3855551 + g 76 -4.6 -5.01732 | TCCTGATGGTACACA GGGT TCC GCCC TTTTTTCGAAAAATT TERM 3666 3855582 - 3855565 - G 80 -7.1 -4.56597 | CCTTTTTTCGAAAAA TTCAACT TGTC AGTTGAA ACGCCGACTATCAAC Patl_3212 3856979 - 3855702 - | coagulation factor 5/8 type-like TERM 3667 3856942 - 3856958 + g 86 -5.2 -5.60993 | AAAGTATCCGATTCG TCTTCT ATTGA AGAAGA TTTTTTTCTAAAAGA Patl_3213 3858962 - 3857007 - | hypothetical protein Patl_3214 3860157 - 3859108 - | hypothetical protein TERM 3668 3859549 - 3859536 - G 70 -2.4 -5.0133 | GACGTTTGCAAAAAA TCAC CTTAGC GTGA GGATATGCTCTCAAC TERM 3669 3859916 - 3859930 + g 72 -2.8 -5.09225 | overlap 3859906 TGTGAGAAAGTAATT GACG CTACTTT CGTC TTTTTTCCATCCAAT Patl_3215 3861755 - 3860382 - | hypothetical protein Patl_3216 3863045 - 3861801 - | glycosyl transferase, group 1 TERM 3670 3862498 - 3862480 - G 74 -3.8 -5.0065 | opp_overlap 3862480, overlap 3862483 GAGGGAGAAATAAAA TGATCGAC ATT ATCGAACA TTCTCTTGATGTAAT TERM 3671 3862919 - 3862932 + g 77 -3.7 -5.1675 | opp_overlap 3862918 3862920, overlap 3862920 TGCGAGCAAGAAAAT AGGCG TCTT CGCCA TTTTTTAGTAACTGG Patl_3217 3864493 - 3863042 - | glycosyl transferase family protein TERM 3672 3864032 - 3864045 + g 72 -8.1 -3.8062 | opp_overlap 3864028 GTGACGAATGATCAT CTGGC TAGA GCCAG TTGTTGTGCCGATTG TERM 3673 3866557 - 3866568 + G 70 -2.2 -5.00884 | TATCTTGTTCAACAA TGCG GATC TGCA TTTTTTAAGAGAGCT Patl_3218 3864632 - 3867340 + | glycosyl transferase family protein Patl_3219 3867372 - 3868361 + | hypothetical protein Patl_3220 3870405 - 3868384 - | glycosyl transferase, group 1 TERM 3674 3869072 - 3869058 - G 80 -10 -3.90744 | GGGTGCTGCAAAGAA CCTCGT CAC ACGAGG CTAAAGCGCGATAAT Patl_3221 3871286 - 3870405 - | hypothetical protein Patl_3222 3872293 - 3871373 - | hypothetical protein TERM 3675 3872093 - 3872080 - G 83 -4.5 -5.41143 | TACCGGCCAAAAAAA CCACA TCTG CGTGG TCAGGCCGGTATTGT Patl_3223 3872446 - 3873228 + | hypothetical protein Patl_3224 3874237 - 3873350 - | hypothetical protein TERM 3676 3873433 - 3873445 + g 72 -5.5 -4.39166 | CTAACGTCAGTAGGT GAGGT ACT GCCTC TTTTAGTGTGTCCAA TERM 3677 3874296 - 3874281 - R 100 -10.4 -5.24129 | opp_overlap 3874269 3874281 TTTGGGCACAAAAAA GCCCTC ATGT GAGGGC TTTTAAATTAAGTTA TERM 3678 3874281 - 3874296 + r 89 -10.4 -4.29845 | opp_overlap 3874281, overlap 3874269 TTTGGGCACAAAAAA GCCCTC ATGT GAGGGC TTTTAAATTAAGTTA Patl_3225 3875657 - 3874320 - | hypothetical protein TERM 3679 3875543 - 3875566 + g 70 -8.8 -3.35798 | opp_overlap 3875543 CTTCAGAGGCGAAAA CTGCTGTTCC GTAT GGGTCAGCAG TTGTACCTGCCGCGT TERM 3680 3875617 - 3875636 + g 71 -10 -3.18812 | opp_overlap 3875617 3875616, overlap 3875615 GTGTTTGCTGAAAAG GCTGTAGC AACG GCTACGGC TAATATTTTTTTGTT Patl_3226 3877016 - 3876057 - | hypothetical protein TERM 3681 3876128 - 3876144 + g 78 -6.5 -4.58663 | overlap 3876129 GTTCTACTTTGAGGT TGGAGCT TAC AGCTCCC TTTTTAACCAATACT TERM 3682 3876129 - 3876143 + g 73 -10 -3.34716 | overlap 3876128 TTCTACTTTGAGGTT GGAGCT TAC AGCTCC CTTTTTAACCAATAC Patl_3227 3877666 - 3877013 - | prepilin-type cleavage/methylation Patl_3228 3878089 - 3877673 - | prepilin-type cleavage/methylation TERM 3683 3877804 - 3877789 - G 70 -9 -3.38294 | overlap 3877785 CCTCATACAAAGACA CAACCC AAGC GGGTTG ACGCCGATAGGTTTC TERM 3684 3877958 - 3877942 - G 72 -2.9 -5.07107 | opp_overlap 3877947 TAAATTGTGAAAAAA CTTCAGG GAG CCCCAAG GCTCGCTCTATGCTT Patl_3229 3878504 - 3878076 - | prepilin-type cleavage/methylation Patl_3230 3878925 - 3878506 - | general secretion pathway protein G Patl_3231 3880239 - 3879049 - | type II secretion system protein Patl_3232 3881873 - 3880236 - | type II secretion system protein E TERM 3685 3882020 - 3882043 + H 81 -11.2 -3.01712 | opp_overlap 3882012 3882023, overlap 3882023 AACCGAAGTAGTCAT TAACCTATTG ACAC CAATAGGTTA TATTACACCACAAAA TERM 3686 3882023 - 3882040 + H 73 -8.5 -3.65812 | opp_overlap 3882012 3882023, overlap 3882020 CGAAGTAGTCATTAA CCTATTG ACAC CAATAGG TTATATTACACCACA TERM 3687 3882597 - 3882584 - g 73 -2.3 -5.17054 | ACAACAGTTAAAAAA GCCGA CTGT TTGGC TTGCCATTGCCTGTT Patl_3233 3882081 - 3883031 + | hypothetical protein Patl_3234 3883028 - 3883609 + | hypothetical protein Patl_3235 3883602 - 3884063 + | hypothetical protein Patl_3236 3884106 - 3886241 + | type II and III secretion system protein TERM 3688 3886338 - 3886307 - T 78 -3 -5.4148 | gap 1, opp_overlap 3886307 TAAATAATTAAAAAA GCCCTAGTGCAT-GA TGA TCTATGTGCTAAGGC TTTTAGGACGTATAA Patl_3237 3886871 - 3886380 - | hypothetical protein TERM 3689 3886835 - 3886823 - G 71 -6.9 -4.10657 | CTACACTGGCCAAAA GGGAC AAT GCCCC AATACACATTTTATT Patl_3238 3888805 - 3887354 - | lipopolysaccharide biosynthesis Patl_3239 3889458 - 3888808 - | ABC transporter related Patl_3240 3890051 - 3889455 - | ABC-2 type transporter Patl_3241 3892022 - 3890259 - | polysaccharide export protein TERM 3690 3890797 - 3890777 - G 71 -6.9 -4.18018 | opp_overlap 3890782 CGGGCGCAGTGAAAA TACTACGTT CTA AACGTTGTA GTGACTCTTCGAGAA Patl_3242 3892384 - 3892019 - | hypothetical protein Patl_3243 3893550 - 3892486 - | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase TERM 3691 3893821 - 3893805 - H 84 -7.9 -4.6856 | CAAATACTCGAAAAA GCGCCAC GAG GTGTCGC CAAGCCCATACATCA Patl_3244 3894106 - 3895593 + | amino acid/peptide transporter TERM 3692 3895585 - 3895569 - f 76 -7.3 -4.18094 | CAAAGCATGGGAAAA GCTTGCT GAG AACAAGC GAGCATAATGGATGC TERM 3693 3895634 - 3895648 + F 77 -10 -3.42407 | opp_overlap 3895625 3895616 AGCTAACAAACGTGG TTCGCC AGT GGCGAA TTGATTAATAATATA TERM 3694 3895677 - 3895704 + F 81 -7 -4.68908 | opp_overlap 3895677 3895676 TAATACTATAAATAG CGCCTACCTG TTTAACTT CAGCTAGGCG TTTCTTTTAGATAAG Patl_3245 3895730 - 3896029 + | hypothetical protein Patl_3246 3896034 - 3897050 + | UDP-glucose 4-epimerase TERM 3695 3897127 - 3897102 - T 100 -12.7 -6.09196 | opp_overlap 3897102 TGGAAAACAAAAAAA GCCCAATTAAC CTAA GTTAATCGGGC TTTTTTTTGATGCTT TERM 3696 3897102 - 3897127 + T 100 -10.5 -5.89827 | opp_overlap 3897102 TGGAAAACAAAAAAA GCCCAATTAAC CTAA GTTAATCGGGC TTTTTTTTGATGCTT Patl_3247 3897943 - 3897176 - | VacJ-like lipoprotein Patl_3248 3899241 - 3897940 - | tetratricopeptide TPR_2 TERM 3697 3898306 - 3898321 + g 72 -3.2 -5.01497 | AGGCACGCTATCAGG CTCTGC TGCT GAAGAG TTTTTATCTGCTGAT Patl_3249 3899687 - 3899238 - | cytochrome C biogenesis protein TERM 3698 3899593 - 3899583 - G 71 -6.8 -4.1235 | overlap 3899553 TAATTCAAAGAACAA CGCA CTT TGCG CATCGGTTTCAAACT Patl_3250 3900256 - 3899684 - | periplasmic protein thiol--disulphide oxidoreductase DsbE Patl_3251 3902286 - 3900253 - | cytochrome c-type biogenesis protein CcmF Patl_3252 3902782 - 3902288 - | cytochrome c-type biogenesis protein CcmE TERM 3699 3902447 - 3902437 - G 76 -8.2 -4.07568 | TTTCGGCGGTTAAAA CGCC CGT GGCG ACGATGCCCTGACCT Patl_3253 3903015 - 3902779 - | Heme exporter protein D (CcmD) Patl_3254 3903765 - 3903019 - | heme exporter protein CcmC Patl_3255 3904433 - 3903765 - | heme exporter protein CcmB Patl_3256 3904966 - 3904430 - | heme exporter protein CcmA Patl_3257 3905693 - 3908299 + | hypothetical protein Patl_3258 3908331 - 3908663 + | FlhB domain-containing protein TERM 3700 3908698 - 3908723 + T 100 -14.9 -3.05935 | opp_overlap 3908698 3908704, overlap 3908704 ACATCAATAATATAA TAAAAACCGCC AAGT GGCGGTTTTTA TTGAATACAAGCTCT TERM 3701 3908723 - 3908698 - T 100 -14.9 -3.86107 | opp_overlap 3908698 3908704, overlap 3908704 ACATCAATAATATAA TAAAAACCGCC AAGT GGCGGTTTTTA TTGAATACAAGCTCT TERM 3702 3908717 - 3908704 - T 100 -9.5 -5.31072 | opp_overlap 3908698 3908704, overlap 3908698 ATAATATAATAAAAA CCGCC AAGT GGCGG TTTTTATTGAATACA TERM 3703 3908704 - 3908717 + T 93 -9.5 -5.10461 | opp_overlap 3908704 3908698, overlap 3908698 ATAATATAATAAAAA CCGCC AAGT GGCGG TTTTTATTGAATACA Patl_3259 3909772 - 3908741 - | recA protein TERM 3704 3909013 - 3909025 + g 71 -3.3 -4.85782 | opp_overlap 3909014, overlap 3909014 ACTCAGCTTGTTTAA ATGGC GGA GCCAC TTTGTTTTTAACCAC Patl_3260 3910514 - 3910110 - | glutathione-dependent formaldehyde-activating, GFA Patl_3261 3910934 - 3910563 - | hypothetical protein TERM 3705 3910828 - 3910849 + g 80 -6.6 -4.78572 | TGCCCTAGCCCTTTG CCTGCCAA ACCCCC TTGGTAGG TTTTATTAATTACCA Patl_3262 3911551 - 3911039 - | CinA-like TERM 3706 3911603 - 3911591 - H 71 -4.9 -4.57569 | TGACGCGCTGAAAAA TATTC AGC GAATA CTATAAGCATGCCAA TERM 3707 3913335 - 3913349 + G 70 -5 -4.38313 | overlap 3913322 TAGCCCTTGAAAAGC GCTTAT ACG ATGAGC TTTTCGATTTACTCT Patl_3263 3911681 - 3914350 + | DNA mismatch repair protein MutS TERM 3708 3914400 - 3914415 + T 82 -6.2 -4.84761 | CCCCCTCGGACGTGC TGAACT TTGC AGTTCA TTTTTGTAGCGGTCT Patl_3264 3915013 - 3914651 - | response regulator receiver protein TERM 3709 3915546 - 3915534 - g 76 -9.1 -3.81929 | opp_overlap 3915533 3915529 GAAGAAGTCATCAAA CGCGA ACG TCGCG GTGATTACTTAGGCG Patl_3265 3915234 - 3916865 + | CTP synthetase TERM 3710 3917271 - 3917251 - g 76 -7.6 -4.35483 | TTTGATCAGAAGAAA GTCGACCA AATCA TGATCGAC TTAGACGGTACTGAA Patl_3266 3916984 - 3918276 + | phosphopyruvate hydratase TERM 3711 3918293 - 3918312 + F 82 -8.6 -4.24204 | overlap 3918291 ACCTATATCTGAAGC GCCCTAGT GCTT ATTAGGGC TTTTAGATGTAAGTG TERM 3712 3918322 - 3918348 + F 78 -7.3 -4.35483 | gap 1, opp_overlap 3918325, overlap 3918326 TAGGGCTTTTAGATG TAAGTGGGCAGC ACAT GCTGCCC-CTCA TTTATTATGGTCACG TERM 3713 3918345 - 3918325 - f 70 -9 -3.12351 | gap 1, opp_overlap 3918322 3918326 GGCTTTTAGATGTAA GTGGGCAGC ACAT GCTGCCC-C TCATTTATTATGGTC TERM 3714 3918326 - 3918345 + F 70 -9.2 -3.16079 | opp_overlap 3918325, overlap 3918322 GCTTTTAGATGTAAG TGGGCAGC ACAT GCTGCCCC TCATTTATTATGGTC Patl_3267 3918355 - 3919038 + | hypothetical protein TERM 3715 3919314 - 3919295 - f 100 -13.6 -5.03201 | opp_overlap 3919295 AACAATAACTAAAAA CCCGTGCT TAGC AGCACGGG TTTTTTCGTTTAAGT TERM 3716 3919295 - 3919314 + F 100 -13.6 -5.38497 | opp_overlap 3919295 AACAATAACTAAAAA CCCGTGCT TAGC AGCACGGG TTTTTTCGTTTAAGT TERM 3717 3919416 - 3919386 - g 76 -7.6 -4.32201 | overlap 3919379 3919388 CCAACCAAGTCAAAA TATTCGACACCACA TTA CGTGATGGCGAACA AGCGCTAGCAGCCAG TERM 3718 3919583 - 3919567 - g 83 -4.3 -5.39221 | opp_overlap 3919568, overlap 3919568 ACAAGAAGTAAAAAA TGCCACA GTC TGCGGCT TATCTCGCGCCTTAG Patl_3268 3919367 - 3920926 + | 2-isopropylmalate synthase Patl_3269 3920934 - 3922034 + | 3-isopropylmalate dehydrogenase TERM 3719 3922197 - 3922185 - g 72 -4.8 -4.56597 | opp_overlap 3922185, overlap 3922186 GGCTTGGCGCAAAAA GGAC GTAAA GTCC GTCGTCCTGATCTGA TERM 3720 3922802 - 3922787 - g 73 -10.4 -3.02511 | overlap 3922757 TGCAGGTCGTGAATA TGCGCC AAAA GGCGCA GACTGGGATGCCGCT Patl_3270 3922047 - 3923453 + | isopropylmalate isomerase large subunit Patl_3271 3923469 - 3924095 + | 3-isopropylmalate dehydratase, small subunit Patl_3272 3924326 - 3925384 + | LacI family transcription regulator Patl_3273 3925448 - 3925912 + | CreA TERM 3721 3925981 - 3925933 - T 90 -9.6 -4.47271 | gap 1, opp_overlap 3925943, overlap 3925943 TAAAGGCAATCAAAA GGT-CATAAAACGCCCTCGATGC TTAT GCAGCGAGGGCGTTATTCACACC TCAACAGACCGCTAG TERM 3722 3925970 - 3925943 - T 100 -17 -4.46581 | opp_overlap 3925943, overlap 3925933 CAAAAGGTCATAAAA CGCCCTCGATGC TTAT GCAGCGAGGGCG TTATTCACACCTCAA TERM 3723 3925943 - 3925970 + T 100 -17 -3.62597 | opp_overlap 3925943 3925933 CAAAAGGTCATAAAA CGCCCTCGATGC TTAT GCAGCGAGGGCG TTATTCACACCTCAA Patl_3274 3928475 - 3926007 - | glycosyltransferase 36 Patl_3275 3930062 - 3928521 - | sugar (glycoside-Pentoside-hexuronide) transporter TERM 3724 3929606 - 3929592 - G 73 -7.8 -4.11585 | ACCCATCACAAATAA GCCTCC CAC GAAGGC ACCAGCAAAACGAAA Patl_3276 3932004 - 3930442 - | tryptophan halogenase TERM 3725 3931532 - 3931558 + g 76 -4.4 -5.08255 | gap 1, opp_overlap 3931533, overlap 3931533 TGGTAACCGTAATTG AGC-ACCCCTG CATATT CAGGGGTAGCG TTTTGTTTTGGGGCT Patl_3277 3933693 - 3932161 - | tryptophan halogenase TERM 3726 3933789 - 3933766 - R 100 -11 -5.3671 | opp_overlap 3933769 3933782, overlap 3933769 AATATAACTAAAAAA CAAGCCGCGA TAAA TCGCGGCTTT AAATGCCGATTAACT TERM 3727 3933786 - 3933769 - R 100 -12.7 -4.73828 | opp_overlap 3933769 3933782, overlap 3933766 ATAACTAAAAAACAA GCCGCGA TAAA TCGCGGC TTTAAATGCCGATTA TERM 3728 3933769 - 3933786 + r 90 -12.7 -3.65827 | opp_overlap 3933769 3933766, overlap 3933782 ATAACTAAAAAACAA GCCGCGA TAAA TCGCGGC TTTAAATGCCGATTA Patl_3278 3936857 - 3933837 - | TonB-dependent receptor Patl_3279 3938859 - 3937945 - | hypothetical protein Patl_3280 3940138 - 3938993 - | hypothetical protein Patl_3281 3941042 - 3940131 - | ATPase Patl_3282 3941306 - 3942523 + | metal dependent phosphohydrolase Patl_3283 3942578 - 3943234 + | hypothetical protein TERM 3729 3943936 - 3943919 - g 71 -9.9 -3.18571 | overlap 3943915 TTCGCCAAAGACATA CTCAACG ACCC CGTTGAG TTGGAGGCTGCATCT Patl_3284 3943322 - 3944560 + | ATP-dependent RNA helicase SrmB TERM 3730 3944668 - 3944632 - T 75 -10.4 -3.19246 | gap 1, opp_overlap 3944634 3944643, overlap 3944636 3944643 CTAAGCTGAATGTAA CGCACAAAAAACCTGCA AATT TGCAGGTTTTTT-TGTG TTAGTTAAGTGTGGT TERM 3731 3944634 - 3944668 + T 95 -13.9 -3.3941 | gap 1, opp_overlap 3944632 3944636 3944643, overlap 3944643 AAGCTGAATGTAACG CACAAAAAA-CCTGCA AATT TGCAGGTTTTTTTGTG TTAGTTAAGTGTGGT TERM 3732 3944665 - 3944636 - T 76 -10.9 -2.57013 | opp_overlap 3944634 3944643, overlap 3944632 3944643 GCTGAATGTAACGCA CAAAAAACCTGCA AATT TGCAGGTTTTTTT GTGTTAGTTAAGTGT TERM 3733 3944643 - 3944658 + T 100 -9 -5.82172 | opp_overlap 3944636 3944632 3944643, overlap 3944634 GTAACGCACAAAAAA CCTGCA AATT TGCAGG TTTTTTTGTGTTAGT TERM 3734 3944658 - 3944643 - T 93 -9 -5.31456 | opp_overlap 3944643 3944634, overlap 3944636 3944632 GTAACGCACAAAAAA CCTGCA AATT TGCAGG TTTTTTTGTGTTAGT Patl_3285 3945215 - 3944751 - | hypothetical protein TERM 3735 3944944 - 3944958 + g 70 -10 -3.01712 | CCTTTACTCGTTTGA CCTTGC TCT GCAAGG TGTTCAAAAGAGCCA Patl_3286 3946403 - 3945297 - | TonB family protein TERM 3736 3946983 - 3947001 + G 76 -8.9 -3.70033 | TGATATTGCACCAGT GAAACGC CAAGC GCGTTTC TTATGTGTATTGGTG Patl_3287 3946633 - 3947259 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Patl_3288 3947264 - 3948454 + | putative oxygen-independent coproporphyrinogen III oxidase Patl_3289 3949169 - 3948513 - | DNA methylase N-4/N-6 Patl_3290 3950016 - 3949237 - | hypothetical protein Patl_3291 3950604 - 3950107 - | hypothetical protein Patl_3292 3952321 - 3950606 - | hypothetical protein TERM 3737 3951030 - 3951042 + g 72 -5.5 -4.54727 | overlap 3951031 CGTCGGCCATGTAAG TCACC ATT GGTGG TTTTAATTTCCCACA Patl_3293 3953121 - 3952408 - | LrgB-like protein Patl_3294 3953541 - 3953164 - | LrgA TERM 3738 3953586 - 3953562 - R 71 -7.1 -3.82202 | TATGCTCAAACACAA GGCTTAGCCGA ACG TCGGGTAACCC TTCACACACGTTGTT Patl_3295 3954964 - 3953606 - | two component, sigma54 specific, Fis family transcriptional regulator Patl_3296 3957008 - 3954990 - | periplasmic sensor signal transduction histidine kinase TERM 3739 3956186 - 3956169 - G 85 -7.1 -5.03314 | opp_overlap 3956169 CTGATTGGCAAAAAA GTGTTTA GTAA TAAACAC TTTGACCTTGGTGCG Patl_3297 3958193 - 3957069 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3740 3958583 - 3958545 - R 100 -17 -3.86897 | opp_overlap 3958535 3958548 3958551 TTGAGCTTGTAGAAA CTATAAGTTTGGTGCTAA GGG CTAGCACCCAACTTATAG CTTAAGCCTTACGCT TERM 3741 3958548 - 3958580 + r 81 -12.2 -2.53911 | opp_overlap 3958545, overlap 3958535 3958551 AGCTTGTAGAAACTA TAAGTTTGGTGCTA AGGGC TAGCACCCAACTTA TAGCTTAAGCCTTAC TERM 3742 3958551 - 3958577 + r 75 -9.5 -3.42056 | opp_overlap 3958545, overlap 3958548 TTGTAGAAACTATAA GTTTGGTGCTA AGGGC TAGCACCCAAC TTATAGCTTAAGCCT glpT 3959990 - 3958617 - | sn-glycerol-3-phosphate transporter TERM 3743 3959528 - 3959511 - G 83 -9.1 -4.1964 | opp_overlap 3959511 CGCAATATTCCAAAA CGAGACC GTAC GGCCTCG TTCATTTCCTGAATA TERM 3744 3959718 - 3959707 - G 75 -3 -5.14563 | CCTGTCATCAAAAAA TAAC GGGG GTTA CTGCGGTCAGACACA Patl_3299 3961439 - 3960138 - | major facilitator transporter Patl_3300 3961693 - 3964089 + | fatty acid cistrans isomerase TERM 3745 3964099 - 3964157 + T 90 -8.4 -5.17353 | gap 1, opp_overlap 3964103 3964109, overlap 3964103 3964109 CGTTAGAGATTAAAT -TAAGTAAAAAGGGCAGCTACCTCAAT CATCTC ATTGAGGTAGCAGCCCTTTTAATTAGC TTTTTTAGTGACTCT TERM 3746 3964152 - 3964103 - T 100 -19.6 -2.75561 | opp_overlap 3964103 3964099 3964109, overlap 3964109 AGAGATTAAATTAAG TAAAAAGGGCAGCTACCTCAAT CATCTC ATTGAGGTAGCAGCCCTTTTAA TTAGCTTTTTTAGTG TERM 3747 3964103 - 3964152 + T 100 -19.6 -3.53783 | opp_overlap 3964103 3964109, overlap 3964099 3964109 AGAGATTAAATTAAG TAAAAAGGGCAGCTACCTCAAT CATCTC ATTGAGGTAGCAGCCCTTTTAA TTAGCTTTTTTAGTG TERM 3748 3964109 - 3964146 + T 100 -18.6 -4.48175 | opp_overlap 3964103 3964109, overlap 3964103 3964099 TAAATTAAGTAAAAA GGGCAGCTACCTCAAT CATCTC ATTGAGGTAGCAGCCC TTTTAATTAGCTTTT TERM 3749 3964146 - 3964109 - T 100 -18.6 -4.95957 | opp_overlap 3964109 3964103 3964099, overlap 3964103 TAAATTAAGTAAAAA GGGCAGCTACCTCAAT CATCTC ATTGAGGTAGCAGCCC TTTTAATTAGCTTTT Patl_3301 3964989 - 3964180 - | hypothetical protein Patl_3302 3965473 - 3965225 - | hypothetical protein Patl_3303 3966451 - 3965555 - | LysR family transcriptional regulator Patl_3304 3966567 - 3967199 + | NAD-dependent epimerase/dehydratase TERM 3750 3967260 - 3967224 - T 93 -11.1 -4.77036 | opp_overlap 3967229, overlap 3967229 TGTGACTAGCAAAAA TAAAATAGCTCAACG TTGTTGG CGTTGAGCTATTTTC AGGTAAGTTACAGCC TERM 3751 3967255 - 3967229 - T 100 -11 -5.3104 | opp_overlap 3967229, overlap 3967224 CTAGCAAAAATAAAA TAGCTCAACG TTGTTGG CGTTGAGCTA TTTTCAGGTAAGTTA TERM 3752 3967229 - 3967255 + T 100 -12.4 -4.15453 | opp_overlap 3967224 3967229 CTAGCAAAAATAAAA TAGCTCAACGTT GTT GGCGTTGAGCTA TTTTCAGGTAAGTTA Patl_3305 3967834 - 3967304 - | hypothetical protein Patl_3306 3968640 - 3968167 - | MgtC/SapB transporter TERM 3753 3969036 - 3969005 - R 95 -15.4 -2.72991 | overlap 3969015 GTAGACGCGGAACCA CCATTGTAAACACA GCGC CGTGTTTACAATGG CAAAACAAATCTACC Patl_3307 3970444 - 3969095 - | dienelactone hydrolase-like Patl_3308 3970992 - 3970549 - | hypothetical protein Patl_3309 3972256 - 3971333 - | hypothetical protein Patl_3310 3972917 - 3972267 - | hypothetical protein Patl_3311 3973452 - 3972904 - | ECF subfamily RNA polymerase sigma-24 factor Patl_3312 3974438 - 3973527 - | LysR family transcriptional regulator TERM 3754 3974284 - 3974254 - G 72 -6.2 -4.27584 | opp_overlap 3974264, overlap 3974255 3974264 AGCTCCAATCCAAAA GGCGTAAAAACAAA GGT TTTGTGTTCACGCT CAAGTAATTGACAGC TERM 3755 3974283 - 3974255 - G 71 -9.7 -3.16068 | opp_overlap 3974264, overlap 3974254 3974264 GCTCCAATCCAAAAG GCGTAAAAACAAA GGT TTTGTGTTCACGC TCAAGTAATTGACAG Patl_3313 3976062 - 3974674 - | phosphate-selective porin O and P TERM 3756 3976251 - 3976231 - R 72 -3.3 -5.10029 | opp_overlap 3976241, overlap 3976221 ATCAATGCCAAAAAA CATACGA TATTTGT TCGCATG TTCAGTATATGGCGC Patl_3314 3977157 - 3976456 - | phosphate uptake regulator, PhoU Patl_3315 3978045 - 3977173 - | phosphate ABC transporter, ATPase subunit Patl_3316 3979383 - 3978058 - | phosphate ABC transporter, inner membrane subunit PstA Patl_3317 3980780 - 3979386 - | phosphate ABC transporter, inner membrane subunit PstC TERM 3757 3980107 - 3980095 - G 71 -6.9 -4.09739 | GGAACCGCCCCAAAA GCACC GGA GGCGC CTACTTGATCAACAC Patl_3318 3981882 - 3980797 - | phosphate binding protein, putative TERM 3758 3981433 - 3981453 + g 71 -10.5 -2.64274 | overlap 3981431 3981429 TATGAACGGATTATC GATGGTGGT TGC ACTACCATC TGGATTTGGCACGCT TERM 3759 3982061 - 3982018 - R 88 -4.2 -5.76633 | gap 4, opp_overlap 3982018 TCACATATAAAAAAA CAGAAC-C-TGTAC-CT-AGCC CTAA GGCTGAGAGTACACGGGTTCTG TTTTTATTTGGCGGT TERM 3760 3982018 - 3982061 + r 78 -4.2 -5.27938 | gap 4, opp_overlap 3982018 TCACATATAAAAAAA CAGAAC-C-TGTAC-CT-AGCC CTAA GGCTGAGAGTACACGGGTTCTG TTTTTATTTGGCGGT Patl_3319 3983364 - 3982096 - | phosphate transporter Patl_3320 3984054 - 3983377 - | hypothetical protein TERM 3761 3983840 - 3983829 - G 70 -2.2 -4.91459 | overlap 3983819 GAATAGGCATAAAAA TACC GCGG GGCA AACTGATGCGAAGAT TERM 3762 3983880 - 3983894 + g 74 -5.8 -4.56367 | opp_overlap 3983891 GCGTGTCAGCTTGCT TTTCTA AAT TAGAAA TTTCTTTCTGAAATA Patl_3321 3984364 - 3984876 + | amino acid-binding ACT Patl_3322 3985021 - 3987105 + | polyphosphate kinase TERM 3763 3988375 - 3988362 - g 89 -6.7 -5.44721 | ACTACCGTAAAAAAA TTCGC CCAA GCGAA ATTGCAGATTTCACT Patl_3323 3987095 - 3988624 + | Ppx/GppA phosphatase TERM 3764 3988745 - 3988759 + F 86 -10 -4.02334 | AGCAATGTGGAACTT CGCAGT TGA ACTGCG TTTCTAATATACATA Patl_3324 3988791 - 3989051 + | hypothetical protein TERM 3765 3989085 - 3989062 - f 70 -8.2 -3.77722 | gap 1, opp_overlap 3989061 3989077 TTTAAGTACCAACAA GGCAACACGCA TTT CGC-TGTTGCC GCTTTCCATATTCAG Patl_3325 3989114 - 3989707 + | hypothetical protein Patl_3326 3990042 - 3989704 - | putative orphan protein TERM 3766 3990231 - 3990199 - R 79 -10 -3.5256 | opp_overlap 3990207, overlap 3990207 GAAACAATTCAAATA CAAAAAAACCAAGC ACTAA GCTTGGTTTTCATG AACACATTCAGCACG TERM 3767 3990207 - 3990223 + r 77 -8 -4.25283 | opp_overlap 3990199 3990207 TCAAATACAAAAAAA CCAAGC ACTAA GCTTGG TTTTCATGAACACAT TERM 3768 3990223 - 3990207 - R 100 -8 -5.88197 | opp_overlap 3990207, overlap 3990199 TCAAATACAAAAAAA CCAAGC ACTAA GCTTGG TTTTCATGAACACAT Patl_3327 3991149 - 3990250 - | fructose-1,6-bisphosphate aldolase TERM 3769 3991088 - 3991106 + g 100 -5.3 -5.94743 | CTTTGGTCAAGGGCC GCGATAA ATCCA TTGTCGC TTTTTATTTTTTTTA pgk 3992482 - 3991307 - | phosphoglycerate kinase TERM 3770 3991485 - 3991498 + g 75 -6.7 -4.41548 | opp_overlap 3991468, overlap 3991483 TTACTTTGTGCAATT GCCAT AGCA ATGGC TTTTGTGCCCTCTCC Patl_3329 3993633 - 3992605 - | D-erythrose-4-phosphate dehydrogenase TERM 3771 3993709 - 3993748 + r 84 -6.7 -5.00196 | gap 2, opp_overlap 3993715 3993717 3993718, overlap 3993717 3993718 GTAAAAAGTGCGTCA CTAAAATAGCTAAGGCGCT CGAA AGCGCCTTAG--ATTATAG TTTTATTGTTTCAAC TERM 3772 3993744 - 3993715 - R 85 -9.3 -4.25283 | opp_overlap 3993709 3993717 3993718, overlap 3993717 3993718 AGTGCGTCACTAAAA TAGCTAAGGCGCT CGAA AGCGCCTTAGATT ATAGTTTTATTGTTT TERM 3773 3993742 - 3993717 - R 89 -11.9 -3.73042 | opp_overlap 3993717 3993709 3993718, overlap 3993715 3993718 TGCGTCACTAAAATA GCTAAGGCGCT CGAA AGCGCCTTAGA TTATAGTTTTATTGT TERM 3774 3993717 - 3993742 + r 89 -11.9 -3.7659 | opp_overlap 3993715 3993717 3993718, overlap 3993709 3993718 TGCGTCACTAAAATA GCTAAGGCGCT CGAA AGCGCCTTAGA TTATAGTTTTATTGT TERM 3775 3993718 - 3993741 + r 95 -15.4 -2.84327 | opp_overlap 3993717 3993715 3993718, overlap 3993717 3993709 GCGTCACTAAAATAG CTAAGGCGCT CGAA AGCGCCTTAG ATTATAGTTTTATTG TERM 3776 3993741 - 3993718 - R 95 -15.4 -2.83504 | opp_overlap 3993718 3993717 3993709, overlap 3993717 3993715 GCGTCACTAAAATAG CTAAGGCGCT CGAA AGCGCCTTAG ATTATAGTTTTATTG Patl_3330 3995777 - 3993777 - | transketolase Patl_3331 3996057 - 3997208 + | S-adenosylmethionine synthetase TERM 3777 3997265 - 3997287 + F 100 -7.1 -6.13 | gap 1, opp_overlap 3997265 CAGTGACACAAAAAA CGTATC-AGC AAGT GCTTGATACG TTTTTTTTTGGCTAT TERM 3778 3997287 - 3997265 - f 93 -7.1 -5.38047 | gap 1, opp_overlap 3997265 CAGTGACACAAAAAA CGTATC-AGC AAGT GCTTGATACG TTTTTTTTTGGCTAT Patl_3332 3997397 - 3998203 + | peptidase M48, Ste24p TERM 3779 3998255 - 3998238 - T 100 -11.3 -6.08563 | opp_overlap 3998238 AACAGACAAAAAAAA TGCCGCT TTAA AGCGGCA TTTTTGTAAGACTTT TERM 3780 3998238 - 3998255 + T 95 -11.3 -4.86033 | opp_overlap 3998238 AACAGACAAAAAAAA TGCCGCT TTAA AGCGGCA TTTTTGTAAGACTTT Patl_3333 3999103 - 3998276 - | MscS mechanosensitive ion channel TERM 3781 3999581 - 3999617 + H 80 -10.4 -3.68962 | opp_overlap 3999579 3999584, overlap 3999584 GAAGTAAACTAAATC TAATACTCGATAGG CCTGAACCC CCTATCGAGTATTG TTCTATATGTTAGAC TERM 3782 3999584 - 3999614 + H 86 -9.9 -3.9679 | opp_overlap 3999579 3999584, overlap 3999581 GTAAACTAAATCTAA TACTCGATAGG CCTGAACCC CCTATCGAGTA TTGTTCTATATGTTA TERM 3783 3999614 - 3999584 - H 75 -9.9 -3.35586 | opp_overlap 3999584 3999581, overlap 3999579 GTAAACTAAATCTAA TACTCGATAGG CCTGAACCC CCTATCGAGTA TTGTTCTATATGTTA Patl_3334 3999764 - 4000492 + | hypothetical protein Patl_3335 4000685 - 4002079 + | histidine kinase Patl_3336 4003259 - 4002171 - | glutathione S-transferase Patl_3337 4004453 - 4003416 - | phospholipase/carboxylesterase TERM 3784 4004563 - 4004545 - R 100 -13.2 -5.24129 | opp_overlap 4004540 CTCGCCCATAAAAAA GGGCTAAC ATG GTTAGCCC TTACAGTATTTATAT Patl_3338 4005332 - 4004589 - | glutaredoxin family protein Patl_3339 4005712 - 4005482 - | hypothetical protein Patl_3340 4006582 - 4005749 - | hypothetical protein TERM 3785 4006080 - 4006068 - G 79 -9.1 -4.09739 | opp_overlap 4006066 TGAATTCGCTCAAAA GGCTG TTG CAGCC AATAATGTAGGCTTG Patl_3341 4007246 - 4006632 - | dephospho-CoA kinase Patl_3342 4008183 - 4007281 - | prepilin peptidase TERM 3786 4008267 - 4008279 + r 89 -9.1 -4.81083 | CAGGATAGATTGTAC GGCTG TTG CAGCC TTTTTACTCCTTAAA Patl_3343 4009495 - 4008290 - | type II secretion system protein TERM 3787 4008983 - 4008965 - G 76 -7.4 -4.30719 | GGTGGTGACAATAAA GGCCACTA CAA TAACGGCC ACCGGATAAAACATG TERM 3788 4009537 - 4009519 - R 100 -11.7 -4.98531 | CTCTTAAATGAAAAA GCCCAGC AAGAG GCTGGGC AGAAATTCGTTTTGT Patl_3344 4010006 - 4009560 - | prepilin-type cleavage/methylation Patl_3345 4011053 - 4010211 - | nicotinate-nucleotide pyrophosphorylase Patl_3346 4011577 - 4011101 - | hypothetical protein Patl_3347 4011705 - 4012289 + | N-acetyl-anhydromuranmyl-L-alanine amidase Patl_3348 4012349 - 4013161 + | regulatory protein AmpE TERM 3789 4013292 - 4013321 + F 83 -9.5 -3.85184 | gap 1, opp_overlap 4013292, overlap 4013285 TACTGCTCTAAGCTA TTGGGTCAATTGGT CTT ACCAATTG-TCCAA TTTGCATGTTTTACG TERM 3790 4013554 - 4013544 - g 82 -5.4 -5.1485 | GAAGCAATACAAAAA TTGG AAG CCAA AGGACTAGTTGAACG Patl_3349 4013379 - 4014134 + | regulatory protein GntR, HTH TERM 3791 4014742 - 4014724 - g 70 -8.8 -3.39529 | CTAAGCGAAGACCAA CTTGACGG CTT CCGTCAGG AAGTAGACGGCAAAG TERM 3792 4016726 - 4016716 - g 74 -6.8 -4.20368 | CCAGGTCAATACAAA GTGC TAG GCAC AGACGGTTTCGGCCG aceE 4014241 - 4016913 + | pyruvate dehydrogenase subunit E1 TERM 3793 4017300 - 4017330 + G 78 -12.7 -2.74488 | gap 1, opp_overlap 4017295, overlap 4017307 ATTGAAGTGACCGTA CC-CGACATCGGTG GTGA CACCGATGTTGAGG TCATTGAAATCCTTG Patl_3351 4016934 - 4018928 + | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 3794 4018939 - 4018965 + F 79 -5.9 -4.93877 | TGTAACGAACAGCTA GGCGATAATGT ACAAA AAGTTATCGCC TTTTCTTTGCTAACC TERM 3795 4020032 - 4020007 - g 77 -9.1 -3.85817 | gap 1 ATGCTTGCTCACAAA GCCG-TACATGA AGG CCATGTAGCGGC TGAAGTTATTTCTGG Patl_3352 4019041 - 4020465 + | dihydrolipoamide dehydrogenase TERM 3796 4020500 - 4020513 + F 100 -9.5 -5.5112 | opp_overlap 4020500 CGTTAGATTTTAAAA GGGCC TCAG GGCCC TTTTTTATTGCTCCC TERM 3797 4020513 - 4020500 - f 89 -9.5 -4.16943 | opp_overlap 4020500 CGTTAGATTTTAAAA GGGCC TCAG GGCCC TTTTTTATTGCTCCC Patl_3353 4020808 - 4022889 + | endothelin-converting protein 1 TERM 3798 4022928 - 4022953 + F 100 -10.5 -5.59655 | opp_overlap 4022928 TAGCTATGATTAAAA GCCAATTGAGG TGCT CCTTGATTGGC TTTTTTATTCCTTTG TERM 3799 4022953 - 4022928 - f 74 -6.1 -4.3129 | opp_overlap 4022928 TAGCTATGATTAAAA GCCAATTGAGG TGCT CCTTGATTGGC TTTTTTATTCCTTTG TERM 3800 4023232 - 4023219 - g 74 -3.7 -5.00616 | overlap 4023220 GCTCTGCGTAAAAAA CGTGC TTTT GCGCG AAAGCGCAGCCAAGA Patl_3354 4022973 - 4023293 + | hypothetical protein Patl_3355 4024231 - 4023290 - | alpha/beta hydrolase fold TERM 3801 4024124 - 4024148 + g 79 -9.3 -4.14392 | GCGCTGGGCCCCTAG CCCCATAATCA GCA TGATTGAGGGG TTTTCGCACTTACCA Patl_3356 4024357 - 4025187 + | putative signal transduction protein TERM 3802 4025418 - 4025402 - g 73 -10.9 -2.72829 | overlap 4025401 GACAGCGGTGGAAAC CTTCCAG CCT CTGGAAG CAACATCACGGCCAC Patl_3357 4025291 - 4026097 + | putative salt-induced outer membrane protein Patl_3358 4026147 - 4026884 + | hypothetical protein TERM 3803 4026927 - 4026909 - T 100 -14.6 -4.88293 | opp_overlap 4026909 AAGCTTAAAAAGAAA CGGCAACC ATG GGTTGCCG TTTTTGTATCTATAT TERM 3804 4026909 - 4026927 + T 100 -14.6 -5.08178 | opp_overlap 4026909 AAGCTTAAAAAGAAA CGGCAACC ATG GGTTGCCG TTTTTGTATCTATAT Patl_3359 4028179 - 4026947 - | hypothetical protein Patl_3360 4030533 - 4028176 - | diguanylate cyclase/phosphodiesterase TERM 3805 4028542 - 4028554 + g 72 -5.5 -4.42386 | TCGGAGCAGGTTTAA TGCCT TAA GGGCA TTTTCTGGATCGCCC Patl_3361 4031134 - 4030526 - | hypothetical protein Patl_3362 4035037 - 4031294 - | ATPase TERM 3806 4033067 - 4033083 + g 70 -2.3 -5.03715 | TTCTACTGACAGATT TTCAACA TCA TGTTCAA TTTTTTCAGACTCAT TERM 3807 4033289 - 4033299 + g 74 -5.4 -4.56969 | GTCTAGCTCTTCACT TTGC GAT GCAA TTTCTTTATCGAGTT TERM 3808 4034489 - 4034508 + g 72 -6.4 -4.20918 | opp_overlap 4034487 4034485 4034489 4034490, overlap 4034490 AACGCTGAGAATAGA CTCGGCAA ATTG TTGCCGAA TTTCTTGAAATTGAC TERM 3809 4034490 - 4034507 + g 71 -9.9 -3.12069 | opp_overlap 4034489 4034487 4034485 4034490, overlap 4034489 ACGCTGAGAATAGAC TCGGCAA ATTG TTGCCGA ATTTCTTGAAATTGA TERM 3810 4035426 - 4035391 - R 100 -14.2 -4.06419 | gap 1, opp_overlap 4035390 4035389 CGGCTGCACAAATAA TTAACCCACGGC-CGTA AAG TACGCACCGTGGGTCAA CATTAGTCTATTCGG Patl_3363 4036461 - 4035445 - | aspartate-semialdehyde dehydrogenase Patl_3364 4037626 - 4036502 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Patl_3365 4038750 - 4037857 - | alpha/beta hydrolase fold Patl_3366 4039502 - 4038750 - | class II aldolase/adducin-like TERM 3811 4040214 - 4040192 - g 76 -9.2 -3.66772 | GCAAACGGTGAATAA GCTACTGCAA GAA TTACAGCAGC AAGGCGTTATTAAAG Patl_3367 4039599 - 4040291 + | Crp/FNR family transcriptional regulator TERM 3812 4040350 - 4040366 + F 79 -8.7 -4.09243 | overlap 4040351 TGCAGACATGCTTGG TGCGACA ATT TGTCGCG TTTTCAGCGCCTATC TERM 3813 4040351 - 4040365 + F 75 -10 -3.05224 | overlap 4040350 GCAGACATGCTTGGT GCGACA ATT TGTCGC GTTTTCAGCGCCTAT TERM 3814 4041312 - 4041298 - g 91 -7.8 -5.1675 | overlap 4041299 TCAGTGATGAAAAAA CGGGCA TGA TGCCCA TGAAAACGTCGGCAG TERM 3815 4041311 - 4041299 - g 76 -9.1 -3.69327 | overlap 4041298 CAGTGATGAAAAAAC GGGCA TGA TGCCC ATGAAAACGTCGGCA TERM 3816 4041495 - 4041507 + G 72 -4.8 -4.7254 | opp_overlap 4041482 AATGACGGTAAGCGT CAGC GAATA GCTG TTTTTGCTGAAACAT TERM 3817 4041737 - 4041726 - g 73 -4.4 -4.73864 | opp_overlap 4041726 GCAATGAACAGAAAA CGTA GCAA TACG TTAATAGATGCGACG Patl_3368 4040427 - 4042580 + | TonB-dependent receptor Patl_3369 4042616 - 4043689 + | periplasmic sensor signal transduction histidine kinase Patl_3370 4043682 - 4044209 + | response regulator receiver protein Patl_3371 4044583 - 4045599 + | hypothetical protein Patl_3372 4045599 - 4046228 + | hypothetical protein TERM 3818 4047861 - 4047846 - g 70 -2.5 -5.01811 | gap 1, overlap 4047847 TGACTAAAGTAAAAA GC-GGG CTTAT CCCAGC GACAAAAATATGTTT Patl_3373 4046237 - 4048237 + | diguanylate cyclase/phosphodiesterase TERM 3819 4048302 - 4048278 - f 93 -9.9 -4.72986 | GACGGCCATTAAAAA GCCGCAACATG AAA CATGAAGCGGC CCAGGGATACTACGA TERM 3820 4048400 - 4048375 - f 72 -9.3 -3.40743 | opp_overlap 4048374 4048372 AAAAAGTTTAATGAA GAAAAAAATAA AAAT TTATTTTTTTC CTGTGTGTCTTATAC Patl_3374 4048628 - 4049557 + | exopolyphosphatase-related protein TERM 3821 4049603 - 4049624 + T 89 -10.1 -4.18488 | overlap 4049605 TGATTCAGCGTTTTT CAGGCCTGC ATTT GCAGGCCTA TTTCTTCCAGTAAAT TERM 3822 4049605 - 4049622 + T 90 -12.7 -3.69068 | overlap 4049603 ATTCAGCGTTTTTCA GGCCTGC ATTT GCAGGCC TATTTCTTCCAGTAA Patl_3375 4050135 - 4049602 - | hypothetical protein Patl_3376 4051121 - 4050312 - | peptidase M23B Patl_3377 4051989 - 4051114 - | hypothetical protein Patl_3378 4053187 - 4052138 - | 37 kDa nucleoid-associated protein TERM 3823 4053468 - 4053503 + G 71 -3.4 -4.82901 | AAGCCAGTCGAGATT TATCATTGATGGCGTT GGGT AATGTCATCACTAATA TTTTTATGCAACAGG Patl_3379 4053374 - 4053592 + | hypothetical protein TERM 3824 4054126 - 4054114 - g 71 -7.7 -3.99805 | opp_overlap 4054109 TTGCAAAAACGTAAA TTGGC CTT GCCAA TCAGCAGTTTTTTTG Patl_3380 4053601 - 4055130 + | alkaline phosphatase superfamily hydrolase TERM 3825 4055169 - 4055154 - T 86 -10.4 -4.1043 | opp_overlap 4055154 TCGAAAGATCATAAA GCCTGC TTCT GCAGGC TTTTTTGTGCCCGCT TERM 3826 4055154 - 4055169 + T 100 -10.4 -5.24531 | opp_overlap 4055154 TCGAAAGATCATAAA GCCTGC TTCT GCAGGC TTTTTTGTGCCCGCT Patl_3381 4056031 - 4055183 - | rRNA (guanine-N(1)-)-methyltransferase TERM 3827 4055624 - 4055634 + g 74 -5.4 -4.65838 | TTTTTTAGCAGCCTT TTGC ACC GCAA TTTTTGAAATGTCTA TERM 3828 4056082 - 4056055 - R 100 -7 -5.60689 | opp_overlap 4056075, overlap 4056075 CCAGATAATAAAAAA GCGCAGTGTA GCAGAATT TACGCTGCGC TTGAGGCTCATTAAG Patl_3382 4057302 - 4056106 - | major facilitator transporter TERM 3829 4057648 - 4057601 - R 100 -10 -5.52384 | opp_overlap 4057615 4057616, overlap 4057602 4057616 CGTTGAGCAAAAAAA TTCACTTATAAAAAAGCCCGCT AAAT AGCGGGCCTTTTCATGATTGAT GCGCTGAACTACTAG TERM 3830 4057647 - 4057602 - R 100 -13.5 -3.90707 | opp_overlap 4057615 4057616, overlap 4057601 4057616 GTTGAGCAAAAAAAT TCACTTATAAAAAAGCCCGCT AAAT AGCGGGCCTTTTCATGATTGA TGCGCTGAACTACTA TERM 3831 4057615 - 4057634 + r 86 -9.2 -4.36411 | opp_overlap 4057602 4057601 4057616, overlap 4057616 ATTCACTTATAAAAA AGCCCGCT AAAT AGCGGGCC TTTTCATGATTGATG TERM 3832 4057633 - 4057616 - R 100 -12.7 -5.28176 | opp_overlap 4057616 4057615, overlap 4057602 4057601 TTCACTTATAAAAAA GCCCGCT AAAT AGCGGGC CTTTTCATGATTGAT TERM 3833 4057616 - 4057633 + r 85 -12.7 -3.21124 | opp_overlap 4057602 4057601 4057616, overlap 4057615 TTCACTTATAAAAAA GCCCGCT AAAT AGCGGGC CTTTTCATGATTGAT Patl_3383 4058874 - 4057660 - | beta-ketoacyl synthase TERM 3834 4058072 - 4058049 - G 73 -9.6 -3.37344 | opp_overlap 4058063, overlap 4058021 4058019 GCTGCATGCAACGAA TAGCACCCTC GCCT GATGGTGCTA CCATATCGGCGCCGT TERM 3835 4059528 - 4059542 + G 73 -10 -3.30825 | overlap 4059524 4059522 ATATCCTATGCCACT CGATGG TTG CCATCG TATGTCTTTTCTAAA Patl_3384 4059136 - 4061253 + | hypothetical protein Patl_3385 4061586 - 4061275 - | hypothetical protein Patl_3386 4062756 - 4061620 - | ATP-NAD/AcoX kinase TERM 3836 4061759 - 4061792 + g 83 -4.5 -5.40474 | opp_overlap 4061778, overlap 4061756 4061778 CCTTGTAATTTGCTT TTGGTCGCCACGAGC AACA GGTTGTCACGACCAA TTTTTTTGAGCACCT Patl_3387 4063388 - 4062756 - | hypothetical protein TERM 3837 4063886 - 4063899 + G 72 -8.1 -3.72576 | ATGGTGACGCATCAG GCGGT AATC ACCGC TTTAATCACAGCGCA Patl_3388 4063537 - 4064274 + | hypothetical protein TERM 3838 4064945 - 4064957 + G 80 -6.3 -4.85782 | opp_overlap 4064941 CTCGTATGAAAGGCT TGCAA ACA TTGCA TTTATTTTTGCAAGA Patl_3389 4064344 - 4065171 + | hypothetical protein Patl_3390 4065178 - 4065642 + | thioesterase superfamily protein TERM 3839 4066618 - 4066605 - g 75 -9.5 -3.61356 | opp_overlap 4066595 AGTACGTAGTTGAAA GCCGC TTAA GCGGC AATCAAGTCCACTTT TERM 3840 4066822 - 4066810 - g 89 -6.3 -5.37593 | opp_overlap 4066809 GGCGAAAGTAAAAAA CATCA ACG TGATG GTATTGCCACTCGAT Patl_3391 4065656 - 4066933 + | putative peptidase A2A Patl_3392 4067896 - 4067039 - | protein of unknown function RIO1 TERM 3841 4067174 - 4067157 - G 72 -5.5 -4.54727 | opp_overlap 4067143 4067159, overlap 4067159 TCTGGGAAATCAAAA TGCCCAG TTAA CTGGGTA TCTGCTTCAAGCTCA TERM 3842 4067370 - 4067343 - G 72 -9.2 -3.5393 | ACCACTTGGGGCAAA TCGATGATCACG GGGC CGTAAGCATCGA CCAAAACATTAAATT TERM 3843 4069152 - 4069138 - g 82 -2.8 -5.60993 | CCGTGCAGAAAAAAA TTGCTG CGA CAGAAA AAATCAAAAACACAC Patl_3393 4068348 - 4069184 + | hypothetical protein Patl_3394 4069317 - 4070213 + | putative 2,3,4, 5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3844 4070296 - 4070315 + T 100 -13.6 -5.28176 | opp_overlap 4070296 GCGGCAGAAAAAAAA GCCAGCTG ATAT CAGCTGGC TTTTTTGTACGTAAC TERM 3845 4070315 - 4070296 - T 100 -13.6 -5.93809 | opp_overlap 4070296 GCGGCAGAAAAAAAA GCCAGCTG ATAT CAGCTGGC TTTTTTGTACGTAAC Patl_3395 4071413 - 4070358 - | bile acid:sodium symporter Patl_3396 4072162 - 4071428 - | NADPH-dependent FMN reductase Patl_3397 4072686 - 4072162 - | protein tyrosine phosphatase TERM 3846 4072383 - 4072365 - G 83 -9.5 -4.05788 | opp_overlap 4072361 4072365 TTTTGCCAAACCAAA GCGGGCA GGTCT CGCCCGC TGCGTTGTCACAAAC Patl_3398 4073119 - 4072775 - | ArsR family transcriptional regulator Patl_3399 4073360 - 4074397 + | MscS mechanosensitive ion channel Patl_3400 4074896 - 4074405 - | ribonuclease H TERM 3847 4075271 - 4075253 - g 75 -3.1 -5.24129 | GTGCGCTATAAAAAA GCCTG GTGGCTGGG CAGGC AATTAATCAGTAAGG Patl_3401 4075022 - 4075519 + | hypothetical protein Patl_3402 4075906 - 4075532 - | hypothetical protein Patl_3403 4076441 - 4076082 - | hypothetical protein TERM 3848 4076518 - 4076506 - R 74 -4.7 -4.86731 | GTTTTTCAAACAAAA GGGCG TGA CGGCC AATGTTAACCAATAG TERM 3849 4076640 - 4076620 - R 72 -10.5 -2.71918 | overlap 4076619 4076617 CTAGGTGAGAAACAT CGTCGAAAT TTC ATCTCGACG CTTAGCCAAAGGCTA TERM 3850 4076775 - 4076742 - R 72 -10.3 -2.59742 | opp_overlap 4076742, overlap 4076741 4076754 TTTAAGGCTGACAAC TCGCTCAGTAAAGCC CAAT GGCAATACTGAGCAA TACTTAGCAAGCTAA Patl_3404 4077741 - 4076893 - | MltA-interacting MipA TERM 3851 4077415 - 4077429 + g 70 -10 -3.04468 | opp_overlap 4077414 4077413 4077415, overlap 4077414 4077417 TGATAAGGTAAAAGC GATGCG TTG CGCATC ATTATTTACTTGCAG Patl_3405 4078351 - 4077938 - | hypothetical protein Patl_3406 4078721 - 4079992 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 3852 4079972 - 4079998 + F 76 -3.6 -5.26316 | opp_overlap 4079974, overlap 4079974 4079976 CAAGCTGACTTAAAG CAGGCGTTCGAC GCA GTTTAACGTCAG TTTTTTGTGCACTAG TERM 3853 4080013 - 4080043 + F 100 -10.6 -5.56264 | opp_overlap 4080031, overlap 4080004 4080031 GTTTTTTGTGCACTA GCCCATTGTTTT CAATCAC AAAACAGTGGGC TTTTTTGTATTTAGG Patl_3407 4080148 - 4080534 + | hypothetical protein Patl_3408 4081755 - 4080643 - | alkaline phosphatase D domain-containing protein TERM 3854 4081398 - 4081449 + g 81 -3.7 -5.42265 | gap 1, opp_overlap 4081397, overlap 4081403 4081410 GATCATCCCATATAC CAATGGTTGGCGTGCTCGCTAGCA TTTTT TGCATGCCAG-GCGTTGACCATTG TTTTTTATACTTTGC TERM 3855 4081410 - 4081421 + g 76 -4.4 -5.08824 | overlap 4081403 4081398 TACCAATGGTTGGCG TGCT CGCT AGCA TTTTTTGCATGCCAG Patl_3409 4082935 - 4081736 - | hypothetical protein TERM 3856 4083048 - 4083067 + r 85 -9.2 -4.2772 | opp_overlap 4083049, overlap 4083049 CTTAATATACGAAAA AGGCGAGC CGAA GCTCGCCA TTTCTATTGATTGCA TERM 3857 4083049 - 4083066 + r 85 -12.7 -3.15909 | opp_overlap 4083049, overlap 4083048 TTAATATACGAAAAA GGCGAGC CGAA GCTCGCC ATTTCTATTGATTGC TERM 3858 4083066 - 4083049 - R 100 -12.7 -4.87807 | opp_overlap 4083049 4083048 TTAATATACGAAAAA GGCGAGC CGAA GCTCGCC ATTTCTATTGATTGC Patl_3410 4085450 - 4083105 - | TonB-dependent receptor TERM 3859 4084961 - 4084918 - G 79 -10.4 -3.58864 | overlap 4084916 4084919 CTACCAGCAGAAATA CTCACCACCATGGACTCT TCCATGCC AGGGTCAATGGTGGTGAA GTTAAGCGTACCGCC TERM 3860 4084960 - 4084919 - G 76 -11.7 -2.74836 | overlap 4084918 4084916 TACCAGCAGAAATAC TCACCACCATGGACTCT TCCATGCC AGGGTCAATGGTGGTGA AGTTAAGCGTACCGC Patl_3411 4085752 - 4086441 + | two component transcriptional regulator Patl_3412 4086438 - 4087853 + | periplasmic sensor signal transduction histidine kinase Patl_3413 4088997 - 4087855 - | hypothetical protein Patl_3414 4091081 - 4089018 - | TonB-dependent receptor TERM 3861 4090177 - 4090167 - G 74 -8.2 -4.00348 | TGCTAACCAATCAAA GCGG CCA CCGC GAAAAGAAGAGTCTG TERM 3862 4090811 - 4090794 - G 71 -3.3 -4.74706 | CGTAACATTCAAAAA CGCATCT TCTA AGCCGCG AATATAAATCTTTTG TERM 3863 4091331 - 4091343 + r 82 -6.2 -4.96388 | AGGTTATAGCGATCA GCGC ATGCC GCGC TTTTCTTTGATCATT djlA 4092182 - 4091328 - | DNA-J like membrane chaperone protein Patl_3416 4092976 - 4092224 - | nucleotidyl transferase Patl_3417 4094084 - 4093047 - | aminoglycoside phosphotransferase TERM 3864 4094126 - 4094137 + H 89 -5.8 -5.4477 | opp_overlap 4094125 TGACAGCGAAGAATG GCGA AATA TCGC TTTTTTTGCAAGTTT Patl_3418 4094239 - 4096446 + | organic solvent tolerance protein Patl_3419 4096514 - 4097809 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3865 4098200 - 4098217 + G 78 -4.9 -5.00616 | GAGGCAGGCATTCCC TTTAGTG GCCA CACTGAA TTTTTTGCCCAGCAG Patl_3420 4097813 - 4098793 + | 4-hydroxythreonine-4-phosphate dehydrogenase Patl_3421 4098790 - 4099596 + | dimethyladenosine transferase apaG 4099597 - 4099998 + | ApaG apaH 4100013 - 4100813 + | diadenosine tetraphosphatase TERM 3866 4102896 - 4102875 - g 70 -2.3 -4.9725 | AGTCGCACACAAAAA TCGACTCAA GAAA TTAACTCGA TGATTGAAGTGCTTC Patl_3424 4101210 - 4103234 + | methyl-accepting chemotaxis sensory transducer TERM 3867 4103273 - 4103292 + T 90 -5 -5.64274 | opp_overlap 4103273, overlap 4103257 TAGCGCACAAAAAAA CCGCTA CTTTTCGA TAGCGG TTTTTTTATGACTAA TERM 3868 4103292 - 4103273 - T 93 -5.7 -5.626 | opp_overlap 4103257 4103273 TAGCGCACAAAAAAA CCGCTAC TTTTCG ATAGCGG TTTTTTTATGACTAA Patl_3425 4104676 - 4103318 - | aspartate kinase III TERM 3869 4106044 - 4106032 - g 77 -3.4 -5.14163 | ATGCACCAATAAAAA GCTT ACAAG AAGC GATAGACAAAAATGA Patl_3426 4104915 - 4106477 + | amidase Patl_3427 4107057 - 4106593 - | hypothetical protein TERM 3870 4107293 - 4107267 - R 100 -9.5 -5.84381 | gap 1 TTAGCAATAAAAAAA GCCGAACTAGGC ATTC ACCT-GTTCGGC TTACAGTATTTTATT Patl_3428 4109946 - 4107334 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Patl_3429 4110367 - 4111443 + | strictosidine synthase TERM 3871 4111575 - 4111598 + F 73 -10.3 -2.90982 | TGACGTGAGTAGTTG GGTCGGTGT AAGCCA ACACCGGCC TCTGTAAAAATTTCT TERM 3872 4112121 - 4112109 - g 74 -5.5 -4.72272 | opp_overlap 4112116, overlap 4112112 TTTGCCGATGAAAAA CAACG CCC CGTCG CAGCGGTTTGTCATG Patl_3430 4111791 - 4112336 + | PfpI family intracellular peptidase TERM 3873 4112386 - 4112409 + T 100 -8.2 -5.84381 | opp_overlap 4112390, overlap 4112390 TGAATTCAAATAGCA AAAAGCCACA TTAA TGTGGCTTTC TTTTTTTATTACTGC TERM 3874 4112405 - 4112390 - T 90 -9 -4.93696 | opp_overlap 4112386 4112390 TTCAAATAGCAAAAA GCCACA TTAA TGTGGC TTTCTTTTTTTATTA TERM 3875 4112390 - 4112405 + T 93 -9 -5.33131 | opp_overlap 4112390, overlap 4112386 TTCAAATAGCAAAAA GCCACA TTAA TGTGGC TTTCTTTTTTTATTA Patl_3431 4114750 - 4112396 - | radical SAM-like TERM 3876 4112516 - 4112527 + g 87 -7.2 -5.09426 | opp_overlap 4112516 ACTGAAGCGAGTTAA GCCC TGTT GGGC TTTTTTACCCTTCGC TERM 3877 4112772 - 4112757 - G 72 -5.4 -4.49337 | gap 1, opp_overlap 4112759, overlap 4112760 4112761 TGATAACGCAGAAAA GCACGGT GCA ACCG-GC GCCGAATTTCACCCT TERM 3878 4114637 - 4114625 - G 72 -4.8 -4.61231 | TGACATGGGTAAAAA TGGC GCAGG GCCA AAACACTCAGCCCAA TERM 3879 4114889 - 4114876 - R 72 -3.1 -5.10077 | AAAGACCGCAAAAAA GGCAA ATAA TTACC GTGAGGAATAGCAGA TERM 3880 4114907 - 4114929 + r 82 -10.6 -3.59262 | opp_overlap 4114900 4114907 GAGGAATAGCAGACA CTGCCCATAA GAT TAATGGGCAG TTTAACACTGTAACA TERM 3881 4114929 - 4114907 - R 78 -10.6 -3.01637 | opp_overlap 4114907, overlap 4114900 GAGGAATAGCAGACA CTGCCCATAA GAT TAATGGGCAG TTTAACACTGTAACA Patl_3432 4116252 - 4114966 - | lytic murein transglycosylase TERM 3882 4115887 - 4115904 + g 80 -6.9 -4.65895 | AAAAGCACGGTGCTT GGCCATC ATTT GCTGGCC TTTTTCAATGCGCCA Patl_3433 4117019 - 4116453 - | peptide deformylase Patl_3434 4118794 - 4117046 - | lipid ABC transporter ATPase/inner membrane protein TERM 3883 4117772 - 4117784 + g 77 -3.3 -5.14965 | ATCCGTTAAGGTTAA GTTGC CTT GCACC TTTTTTGCTAACAAT TERM 3884 4117859 - 4117873 + g 74 -5.6 -4.66833 | CTCCATTAAACGCTC GCTGGC TCC GGCAGC TTTTTGAACTTCCCC Patl_3435 4118991 - 4120673 + | sulfatase TERM 3885 4121281 - 4121305 + G 72 -5 -4.7078 | gap 1, overlap 4121283 ACTGACAATTTATTT GCTGACC-CCA ACTT TGGTGGTCAAC TTTTTAACTACTTAG TERM 3886 4121795 - 4121809 + G 72 -2.7 -5.0925 | overlap 4121796 TAGCAGTACCTGAGC CCGCC TTACT GGCGC TTTTTGGTTTTGGCA Patl_3436 4120933 - 4121865 + | PEP motif-containing protein TERM 3887 4121933 - 4121960 + T 88 -11.4 -3.60098 | opp_overlap 4121939, overlap 4121939 AACCCACCATTCCAA TAAAAAGCCCTC ATCA GAGGGCTTTCTA TTTGAGCTAGAAGCT TERM 3888 4121939 - 4121954 + T 90 -10.4 -4.33928 | opp_overlap 4121939, overlap 4121933 CCATTCCAATAAAAA GCCCTC ATCA GAGGGC TTTCTATTTGAGCTA TERM 3889 4121954 - 4121939 - T 93 -10.4 -5.08601 | opp_overlap 4121939 4121933 CCATTCCAATAAAAA GCCCTC ATCA GAGGGC TTTCTATTTGAGCTA Patl_3437 4124106 - 4122052 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3890 4124345 - 4124321 - R 72 -4.4 -4.6902 | gap 1, overlap 4124312 4124323 4124325 4124326 4124328 TCACAATGGTAAAAA TATACCACTGG TGAA CCAGT-GTACA GAAAAGTTACGAGCG Patl_3438 4125276 - 4124602 - | hypothetical protein TERM 3891 4125075 - 4125062 - G 74 -5.9 -4.614 | overlap 4125071 CTTAAGTACATAAAA GGCAG TAAG CCGCC GAACACCGCAGTAGA Patl_3439 4126507 - 4125488 - | hypothetical protein Patl_3440 4126663 - 4127505 + | hypothetical protein TERM 3892 4127587 - 4127562 - T 100 -13.3 -5.43487 | AAATGACATAAAAAA TCGGGCGCAGT TTGC ACTGAGCCCGA TACAAATAGTCTACT Patl_3441 4130193 - 4127662 - | TonB-dependent receptor TERM 3893 4129935 - 4129916 - G 75 -6.4 -4.37711 | TGAGGAAAGTTAAAA CTTGGCAA CAAG TTGCCCAG AATCATATTGGTTTC TERM 3894 4130493 - 4130507 + H 74 -4.2 -5.11836 | opp_overlap 4130493 4130491 GGCCAAATATCAACA CCTGCT GTA AACAGG TTTTATTTTCAGTCT TERM 3895 4131253 - 4131241 - g 77 -3.4 -5.10767 | overlap 4131233 CAGCGAAGACAAAAA GCTT GCCCT AAGC GACGCCATAAAAGCC Patl_3442 4130693 - 4132144 + | exonuclease subunit SbcD TERM 3896 4133092 - 4133076 - g 79 -8.7 -4.36411 | overlap 4133090 CATTAACGACGAAAA GGCCTTG GGT CAAAGCC AGCAGCAACTGCAAA TERM 3897 4134835 - 4134809 - g 83 -10.8 -3.80189 | overlap 4134826 AGACATTAAGCGAAA CGCTGCGCACTT TAG AAGCGCGCCACG AACACGCTCAGCAGC TERM 3898 4135157 - 4135143 - g 80 -10 -3.88232 | GTTGGCACACAACAA TGCCAC CCA GTGGCA ACTACAAACGCGCGA Patl_3443 4132144 - 4135842 + | SMC protein-like TERM 3899 4136058 - 4136071 + F 81 -6.7 -4.7254 | overlap 4136050 4136069 AATCGCGTTGCTCAC CGCAA TCTA TTGCG TTTTTGATACGGCAT TERM 3900 4136348 - 4136334 - f 73 -7.1 -4.07885 | opp_overlap 4136327 4136340 CACTGGCCGTGAAAA CGCGT TCCCG ACGCG GCTTTCACTTGAATG TERM 3901 4136517 - 4136530 + F 79 -6.7 -4.58663 | AATCGCTTCGCTCAC CGTCA TCCA TGACG TTTTTCAAGCCTCAT TERM 3902 4136756 - 4136773 + F 70 -9.9 -2.71364 | GGTGCCTCACCCAGC TTCGCCA TCCA TGGCGAA TCGTTCACCCGATAG Patl_3446 4137367 - 4137651 + | XRE family transcriptional regulator TERM 3903 4137779 - 4137790 + F 79 -5.8 -5.00616 | ATATGCTTCGCACTC GGCA TCCA TGCC TTTTTTCAAACGAAA TERM 3904 4138041 - 4138029 - f 79 -9.1 -3.83717 | overlap 4138027 GAAAAAGCCAAAACA TGCGC TGC GCGCA CTAAAAGTCTGAGAT TERM 3905 4138108 - 4138098 - f 93 -6.8 -5.36181 | AAAGAAAAAAAGAAA CGAC TGC GTCG CCAAAACATGTGCTT TERM 3906 4138328 - 4138342 + F 74 -4.2 -5.02074 | opp_overlap 4138340, overlap 4138340 GTATGCAAAGCTACT GCGC ACATAAA GCGC TTTTTTAAGGCGTGA TERM 3907 4138429 - 4138413 - f 79 -9.5 -3.63627 | opp_overlap 4138398, overlap 4138420 GTTTCATATTGTAAA TGAAGCA TCT TGCTTCA AAAAACTACCCCGTA Patl_3448 4138629 - 4139237 + | hypothetical protein TERM 3908 4139309 - 4139270 - T 91 -11 -4.41348 | gap 1, opp_overlap 4139270 4139277, overlap 4139277 GTCTTTTTAAAGAAA CAATAAACATCGGTACATA GTG CATGTGCCGATGTTT-TTG TATGTAGTTAATTAT TERM 3909 4139270 - 4139309 + T 84 -12.5 -3.03956 | gap 1, opp_overlap 4139270 4139277, overlap 4139277 GTCTTTTTAAAGAAA CAATAAACATCGGTACAT AGTGC ATGTGCCGATGTTT-TTG TATGTAGTTAATTAT TERM 3910 4139303 - 4139277 - T 93 -10.2 -4.71584 | opp_overlap 4139270 4139277, overlap 4139270 TAAAGAAACAATAAA CATCGGTACATA GTG CATGTGCCGATG TTTTTGTATGTAGTT TERM 3911 4139277 - 4139303 + T 100 -11.7 -5.06505 | opp_overlap 4139277 4139270, overlap 4139270 TAAAGAAACAATAAA CATCGGTACAT AGTGC ATGTGCCGATG TTTTTGTATGTAGTT TERM 3912 4139388 - 4139406 + T 80 -11 -3.29471 | CACACCGGCTCTTAT TTGTGGCC TTC GGCCACGA TTCATGTGCTGCCCA TERM 3913 4139571 - 4139582 + T 79 -5.8 -5.00616 | ATATGCTTCGCACTC GGCA TCCA TGCC TTTTTTCAAACGAAA TERM 3914 4139809 - 4139826 + T 70 -9.9 -2.71364 | GGTGCCTCACCCAGC TTCGCCA TCCA TGGCGAA TCGTTCACCCGATAG TERM 3915 4140018 - 4140003 - T 100 -4.6 -5.93252 | opp_overlap 4140014, overlap 4140004 4140007 TGGAAAAAGAAAAAA GCAACG GCTA CGCCGC TAAGAAAGCGGCTTT TERM 3916 4140017 - 4140007 - T 75 -8.2 -4.09805 | opp_overlap 4140014, overlap 4140003 4140004 AAAAGAAAAAAGCAA CGGC TAC GCCG CTAAGAAAGCGGCTT TERM 3917 4140014 - 4140030 + T 91 -9.4 -4.63527 | opp_overlap 4140007 4140003 4140004 AAAAGCAACGGCTAC GCCGCT AAGAA AGCGGC TTTTTCGAGTGCTGA TERM 3918 4140230 - 4140214 - T 100 -6.5 -5.79595 | overlap 4140216 4140218 TTTTAAAAGAAAAAA CAGCGAC TGC GTCGCCA AATGCAACGGCTACG TERM 3919 4140228 - 4140216 - T 88 -9.1 -4.53077 | overlap 4140214 4140218 TTAAAAGAAAAAACA GCGAC TGC GTCGC CAAATGCAACGGCTA TERM 3920 4140268 - 4140238 - T 75 -9.6 -3.27525 | opp_overlap 4140244 4140258, overlap 4140218 CGTCGCCAAATGCAA CGGCTACGCCGCCT AAA AAGCGGCGTTTCCA AGCGCGGATTTAAAA TERM 3921 4140244 - 4140262 + T 79 -10.2 -3.53091 | opp_overlap 4140218 4140238, overlap 4140258 CAAATGCAACGGCTA CGCCGCCT AAA AAGCGGCG TTTCCAAGCGCGGAT TERM 3922 4140415 - 4140400 - T 100 -4.6 -6.20267 | opp_overlap 4140411, overlap 4140401 4140404 TGAAAAAGAAAAAAA GCAACG GCTA CGCCGC TAAGAAGCGGCTTTT TERM 3923 4140417 - 4140401 - T 71 -6.5 -4.285 | opp_overlap 4140411, overlap 4140400 4140404 GAAAAAGAAAAAAAG CAACGGC TAC GCCGCTA AGAAGCGGCTTTTTC TERM 3924 4140414 - 4140404 - T 77 -8.2 -4.14454 | opp_overlap 4140411, overlap 4140400 4140401 AAAGAAAAAAAGCAA CGGC TAC GCCG CTAAGAAGCGGCTTT TERM 3925 4140411 - 4140426 + T 91 -10.4 -4.62069 | opp_overlap 4140404 4140400 4140401 AAAAGCAACGGCTAC GCCGCT AAGA AGCGGC TTTTTCGAGTGCGGA TERM 3926 4140506 - 4140490 - T 76 -10.9 -2.62616 | overlap 4140492 TCACGGTTCACACGA TAGGAGC GTT GCTCCTA AAAGCCTCGGGCTCA TERM 3927 4140693 - 4140654 - T 100 -5.6 -6.20267 | gap 1, opp_overlap 4140664 4140666 4140685, overlap 4140658 GGAAAAAGAAAAAAA GCA-ACGGCTACGCCGCTT AGA AAGCGGCGTTTTCGAGTGC GGATTTGAAAGGAAT TERM 3928 4140688 - 4140658 - T 89 -9.6 -4.14454 | opp_overlap 4140664 4140666 4140685, overlap 4140654 AAAGAAAAAAAGCAA CGGCTACGCCGCTT AGA AAGCGGCGTTTTCG AGTGCGGATTTGAAA TERM 3929 4140664 - 4140682 + T 100 -14.6 -4.13945 | opp_overlap 4140658 4140654, overlap 4140666 AAAAAGCAACGGCTA CGCCGCTT AGA AAGCGGCG TTTTCGAGTGCGGAT Patl_3450 4140992 - 4140711 - | hypothetical protein TERM 3930 4141495 - 4141511 + G 71 -9.5 -3.18023 | overlap 4141494 CGCGTATTTTCATTC GGTGAAT ACA ATTCACC TGTTAGTCATAATCC Patl_3451 4141105 - 4142313 + | transposase, IS4 Patl_3452 4143835 - 4142276 - | hypothetical protein TERM 3931 4143158 - 4143174 + g 71 -9.5 -3.14132 | ACCGCGTTGCTTTAA GTGGTAA GTA TTACCAC TTACTCGAACACCAA TERM 3932 4143319 - 4143345 + g 73 -11 -2.62371 | opp_overlap 4143312, overlap 4143318 TTATGAACTCTTCAC CTTGCGTAGATA AAA TATCTGCGTAAG CTTCATTCAGTACAT Patl_3453 4144598 - 4143957 - | hypothetical protein Patl_3454 4145486 - 4144869 - | hypothetical protein TERM 3933 4146384 - 4146365 - g 72 -9.2 -3.60792 | opp_overlap 4146357, overlap 4146368 CGCTTAACCTTGAAA GAGCCGCC CCGT GGCGGTTC AGGCATGGTCTCTGA Patl_3455 4145801 - 4147093 + | major facilitator transporter TERM 3934 4147146 - 4147095 - T 74 -9.3 -3.59979 | opp_overlap 4147143, overlap 4147096 4147124 CTGCTTCAGTTTAAA TGCTAGCGCCTGTGGCTAGCGCA AAAAAG TGCGCTAGCCAAGGGCATTGGCC TTGCGATATGGCCCT TERM 3935 4147145 - 4147096 - T 83 -12.8 -2.75844 | opp_overlap 4147143, overlap 4147095 4147124 TGCTTCAGTTTAAAT GCTAGCGCCTGTGGCTAGCGCA AAAAAG TGCGCTAGCCAAGGGCATTGGC CTTGCGATATGGCCC Patl_3456 4148921 - 4147128 - | type III restriction enzyme, res subunit TERM 3936 4147329 - 4147340 + g 81 -3.6 -5.37345 | GAATAAATCATTAAA GCGT TGTC GCGC TTTTTTATAATTGAA TERM 3937 4148026 - 4148049 + g 74 -3.9 -4.98911 | gap 1 TGTTTAGCTTTAAAG GCAGCGATGA GCGTG TCA-CGTTGC TTTATTTTTGTGGTG TERM 3938 4148614 - 4148657 + g 80 -6.8 -4.62069 | gap 1 GCCTCTAAGTTTGCA GACAGCGA-CTGAATACTAGC GAA GGTCGTTTTCAGGTTGCTGTC TTTTTGGCCTAAGCC Patl_3457 4150171 - 4148999 - | nucleoside phosphatase GDA1/CD39 TERM 3939 4149218 - 4149244 + g 84 -5.3 -5.37345 | gap 1 TGCATGACTTTTATT GAAACAG-CATT GGTT GATGTCTGTTTC TTTTTTATAGTTAAA TERM 3940 4150130 - 4150107 - G 74 -6 -4.62441 | gap 1, overlap 4150111 TCGTATACAAACAAA CGAGTGCCGCT ACT ACCGGCA-TCG TAAATGATGTGACAA Patl_3458 4151037 - 4150342 - | GrxB family glutaredoxin TERM 3941 4150598 - 4150610 + g 100 -7.7 -5.64274 | opp_overlap 4150597 4150598, overlap 4150595 GCCTCAGCAAAAGAG CCAAG TTC CTTGG TTTTTTTGTGAGTGA TERM 3942 4151155 - 4151173 + H 83 -5.3 -5.31275 | gap 1 GTTTGATTTTTGTAA GCCCATTG TCAG CAA-GGGC TTTTTTGTGATAGAA TERM 3943 4152013 - 4151993 - g 76 -8.3 -4.15565 | overlap 4151996 CTGAGTACGCGAAAA CACTAGCGA TCA TCGCTAACG ACCCAAGCGACTTTT TERM 3944 4152243 - 4152231 - g 70 -4.7 -4.4009 | overlap 4152232 GGGTATTTTAGAAAA CGGCC CGC GCCCG AGTGCTGCTGGCCCC TERM 3945 4152917 - 4152907 - g 73 -4.6 -4.82901 | GTGCGTTTAGAAAAA GACG TTG CGCC CGATTCACTTATCTC Patl_3459 4151323 - 4153071 + | gamma-glutamyltransferase TERM 3946 4153123 - 4153102 - T 100 -12.3 -4.38927 | gap 1, opp_overlap 4153102 CTTTCATACAACAAA CGGCGGC-CA ACT TGAGCCGCCG TTTTCGTTTGACGCT TERM 3947 4153102 - 4153123 + T 100 -12.3 -4.55128 | gap 1, opp_overlap 4153102 CTTTCATACAACAAA CGGCGGC-CA ACT TGAGCCGCCG TTTTCGTTTGACGCT Patl_3460 4153706 - 4153428 - | hypothetical protein Patl_3461 4154228 - 4153740 - | hypothetical protein TERM 3948 4154098 - 4154045 - G 70 -9.6 -3.11768 | gap 2, opp_overlap 4154051, overlap 4154049 4154051 GCACACCAGTCAACA CCAACACCATGGCTCGGGCAGAGAGT TTCC ACTCAC-GCCCG-GCTAAGGTCTTGG CTAGCGATAGCTGTC Patl_3462 4154538 - 4154233 - | hypothetical protein TERM 3949 4154455 - 4154472 + g 74 -3.4 -5.02074 | TGCATCTACAGAGTC GTGCAA TGCTTC TTGCGC TTTTTTCGAAACTGG TERM 3950 4154705 - 4154687 - R 76 -6.6 -4.45544 | overlap 4154691 CTTGACTAAGTAAAA GCAATGGC TGT GCCAGCGC GGTAAATAATAAGAA TERM 3951 4154763 - 4154751 - R 80 -7.7 -4.36206 | ATAAGTTACAATAAA TGGTG TAT CACCA GCGCAGCCGCGCCTT Patl_3463 4155550 - 4154948 - | hypothetical protein Patl_3464 4157519 - 4155942 - | methyl-accepting chemotaxis sensory transducer Patl_3465 4158242 - 4157733 - | AsnC family transcriptional regulator TERM 3952 4158221 - 4158232 + g 89 -4.4 -5.72207 | overlap 4158207 TTCGGTTGTAACTAT CGAT TTTA ATCG TTTTTTTCATTTCAC TERM 3953 4158898 - 4158910 + G 71 -6.9 -4.03234 | opp_overlap 4158892 TTGAAGTGATGCGCG GCGCC CAA GGTGC TTTATATGGCCGCGG TERM 3954 4159872 - 4159849 - g 80 -6 -5.00616 | CCTTCGCGCAAAAAA CCTTTAGCCA GTCG CAGCCAAAGG TCACCCTTGCTTACC TERM 3955 4159896 - 4159908 + G 72 -6.3 -4.21319 | opp_overlap 4159895 GCTTACCAAGCAATG CCAAA TTT TTTGG TTTATTCAAGTTACT TERM 3956 4160010 - 4160027 + G 87 -11.3 -3.91716 | opp_overlap 4160022 TCAGACAGCGTTGAA GGTGGCT TTAA AGCCACC TTGTTTGAAAACTCG Patl_3466 4158456 - 4160612 + | TonB-dependent receptor TERM 3957 4160657 - 4160679 + F 86 -9.1 -4.48221 | opp_overlap 4160661, overlap 4160659 CAGCTAAACATTTTT AACAGCCCC AATCA GGGGCTGTC TTTTATAGGTTACTC TERM 3958 4160659 - 4160677 + F 91 -11.7 -3.84304 | opp_overlap 4160661, overlap 4160657 GCTAAACATTTTTAA CAGCCCC AATCA GGGGCTG TCTTTTATAGGTTAC Patl_3467 4160699 - 4162018 + | permease for cytosine/purines, uracil, thiamine, allantoin TERM 3959 4162148 - 4162132 - f 78 -3 -5.47821 | gap 1, overlap 4162134 4162137 4162139 ATGCAGCTAAAAAAA CACCAGA TTGC TCTGG-G TAAATGCTTCCCCAG TERM 3960 4162147 - 4162134 - f 76 -6.7 -4.37763 | overlap 4162132 4162137 4162139 GCAGCTAAAAAAACA CCAGA TTGC TCTGG GTAAATGCTTCCCCA TERM 3961 4162168 - 4162139 - f 70 -9.3 -3.11522 | overlap 4162134 4162132 4162137 TAAAAAAACACCAGA TTGCTCTGGGTAA ATGC TTCCCCAGCGCAA AAGAGGATTAAACAT TERM 3962 4162896 - 4162919 + G 72 -10.2 -2.9348 | opp_overlap 4162881, overlap 4162889 GATGACATTGCCGAT GCCATCGCCG ATTG CGCCGGTGGC TATGTGGCGTTTCGC Patl_3468 4162182 - 4163303 + | hypothetical protein TERM 3963 4163328 - 4163362 + T 73 -7.9 -3.84825 | opp_overlap 4163328 ATTCAGATATAAGGA GCCCATTTTACGAGT ATCTC GCTCGTTAAATTGGC TTTGATATCAATACG TERM 3964 4163408 - 4163395 - T 80 -4.5 -5.21709 | TTTCATATGAAAAAA GGCAT GATT ACGCC GTTAAATTACACTTG Patl_3469 4164135 - 4163410 - | pseudouridine synthase, Rsu Patl_3470 4165826 - 4164228 - | sulfotransferase TERM 3965 4165624 - 4165637 + g 71 -3.8 -4.75776 | TATTCAGCTTGCGGC GCGA TGGCAT TCGC TTTTTCAATTAACTT TERM 3966 4165880 - 4165894 + r 84 -7 -4.91712 | opp_overlap 4165880, overlap 4165874 TTCACTTATAAAAAA GGGCAC TCA GCGCCC TTTTTATGCATTAAG TERM 3967 4165894 - 4165880 - R 93 -9.2 -5.28176 | opp_overlap 4165880 4165874 TTCACTTATAAAAAA GGGCAC TCA GCGCCC TTTTTATGCATTAAG Patl_3471 4168290 - 4165924 - | TonB-dependent receptor TERM 3968 4168454 - 4168470 + r 73 -5.8 -4.52703 | opp_overlap 4168454, overlap 4168442 ATCCCAGCTAGCACA GCAGGT TTCAT GCCTGC TTTTCTGATACTTTA TERM 3969 4168930 - 4168897 - R 81 -5.4 -5.14563 | opp_overlap 4168924 CGCTGTACTAAAAAA GATAGCAACGCA ATTTTACGTA TACGCTGCTATC AGCACTTTCCATTAT Patl_3472 4170132 - 4168942 - | globin TERM 3970 4169139 - 4169169 + g 82 -11.2 -3.57173 | TGTCAGCCTTAGGTG CTTGGCTTGCATAC CAA GTATGCGTGCTAAG TTGTGGTGTATTTTT TERM 3971 4169632 - 4169645 + g 90 -9.5 -4.41494 | opp_overlap 4169632 AAAACTAGTGACCAA CGCCG ATTC CGGCG TTTTGCTTAGCACTG TERM 3972 4169645 - 4169632 - G 71 -9.5 -3.21551 | opp_overlap 4169632 AAAACTAGTGACCAA CGCCG ATTC CGGCG TTTTGCTTAGCACTG TERM 3973 4169998 - 4170010 + g 72 -4.9 -4.62069 | overlap 4169985 ATTGGCCTGATTCGC CATAT TGA ATATG TTTTTCAGCTCAGGA Patl_3473 4171496 - 4170228 - | NnrS TERM 3974 4171382 - 4171405 + g 72 -3 -5.0917 | gap 1, opp_overlap 4171381 4171395, overlap 4171382 4171384 4171391 CGAGTGACCATACAG CGGC-CTGAGG CAA CCCCAGTGCGG TTTCTTTTTTGCTCA TERM 3975 4171391 - 4171409 + g 75 -3 -5.14563 | opp_overlap 4171381 4171395, overlap 4171384 4171382 4171382 ATACAGCGGCCTGAG GCAACCCC AGT GCGGTTTC TTTTTTGCTCAAGGG Patl_3474 4171826 - 4171497 - | hypothetical protein TERM 3976 4171974 - 4171960 - H 77 -8.6 -3.86822 | opp_overlap 4171958 4171960 TAACCCTGTCATAAA GAGTCA TAT TGACTC TATTAATTATGAGTC TERM 3977 4171960 - 4171974 + H 70 -8.6 -3.30039 | opp_overlap 4171960, overlap 4171958 TAACCCTGTCATAAA GAGTCA TAT TGACTC TATTAATTATGAGTC TERM 3978 4171987 - 4172016 + H 85 -12.4 -3.25802 | opp_overlap 4171981 4171984 4171995, overlap 4171981 4171995 CTCTATTAATTATGA GTCATAAAGACT CTAAAA AGTCTTTATGAC TTGATACATTTAATG Patl_3475 4172076 - 4173665 + | anaerobic nitric oxide reductase transcription regulator TERM 3979 4173716 - 4173682 - T 76 -10.8 -2.71144 | CATGTGTTTTAATTA GCCAGCCTTGATTA CGAACGT TCACCAAGGCTGGC ACATAACTAATGTAA Patl_3476 4174688 - 4173723 - | beta-lactamase-like Patl_3477 4175011 - 4176312 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 3980 4176345 - 4176317 - T 87 -12.4 -3.39142 | opp_overlap 4176317 4176318 GTGAGAGCTAAGTAA GCGCCCTGGGTG TTATG CACCCAAGGGGC AGCTTCATTTAGTAA Patl_3478 4176800 - 4176354 - | cyanate hydratase TERM 3981 4176590 - 4176574 - G 82 -10.9 -3.53091 | ACCGCCTCCGTGAAA GTGCCTT TGT AAGGCAC GACCTGTAACCACGC Patl_3479 4178601 - 4176859 - | protein serine/threonine phosphatases TERM 3982 4178476 - 4178490 + g 72 -6.4 -4.2679 | GATGCCATCGGCCAT GGCTAA TAC TTGGCC TTTTAATCGACCTTG TERM 3983 4178577 - 4178556 - G 81 -12.3 -3.19889 | GATTAACAGATTTAA GGCCAGCAA TAGA CTGCTGGCC GACTGTTAACTTAGC Patl_3480 4179454 - 4178588 - | formate/nitrite transporter TERM 3984 4179589 - 4179547 - R 100 -15.1 -6.5058 | gap 1, overlap 4179580 4179583 ACAAACAAAAAAAAA CGGCGTC-AGTCTTTCCACT AAAA AGTAGAAACACTAGACGCCG TCGTCAGAATTAATT TERM 3985 4180241 - 4180257 + r 70 -9.5 -2.62983 | overlap 4180244 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCACTGAG TERM 3986 4180366 - 4180382 + r 70 -9.5 -2.62983 | overlap 4180369 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCACTGAG TERM 3987 4180458 - 4180432 - R 78 -7.2 -4.37886 | overlap 4180433 4180436 TGATTTGTGACAAAA TCATCCGCTGTC ATC AACAGCGGGTGC GCATTTTACAAAAAC TERM 3988 4180457 - 4180433 - R 79 -10.7 -3.2241 | overlap 4180432 4180436 GATTTGTGACAAAAT CATCCGCTGTC ATC AACAGCGGGTG CGCATTTTACAAAAA TERM 3989 4180454 - 4180436 - R 76 -11 -2.50077 | overlap 4180433 4180432 TTGTGACAAAATCAT CCGCTGTC ATC AACAGCGG GTGCGCATTTTACAA TERM 3990 4180489 - 4180473 - R 82 -6.5 -4.85599 | overlap 4180476 CGCATTTTACAAAAA CTAGCGT GGG ACGCAAG CCCTAAATTGCATTT Patl_3481 4181126 - 4180581 - | oligoribonuclease TERM 3991 4181358 - 4181375 + G 72 -9.1 -3.65351 | opp_overlap 4181357 AGAAGATCAGCAATC CGGTCGA GTGA TCGGCCG TTTCGGTAAGCATGC TERM 3992 4181542 - 4181561 + G 72 -4.9 -4.56775 | opp_overlap 4181542 GTACAAGACCGTAAA TCGGTGC TCACGC GCCCCGA TTTTTACGACGGCGT TERM 3993 4181820 - 4181810 - g 76 -8.2 -4.16251 | opp_overlap 4181810 4181812 4181816 4181817 ACACAAGTTGTAAAA CCCG CAC CGGG ATCAGCGATCTCGCT Patl_3482 4181239 - 4182267 + | ribosome-associated GTPase TERM 3994 4182457 - 4182447 - g 78 -5.4 -4.85599 | opp_overlap 4182447 TCGATTCGATAAAAA TTGC ATT GCAA TACATTACACCTAAG TERM 3995 4183026 - 4183040 + G 75 -10 -3.62522 | AGATGGCCATGGTGT TGGTGG GAG CCACCA TTGTTGCCAGCATTG Patl_3483 4182428 - 4183288 + | phosphatidylserine decarboxylase Patl_3484 4183291 - 4184157 + | hypothetical protein Patl_3485 4184167 - 4184892 + | glycerophosphoryl diester phosphodiesterase Patl_3486 4185368 - 4184958 - | hypothetical protein TERM 3996 4185258 - 4185246 - G 74 -3.3 -5.00884 | ATCTTGCGCAAAAAA GCTCG CGC CGATC AAAGGCAGCAAAGGG Patl_3487 4186809 - 4185529 - | hypothetical protein TERM 3997 4186438 - 4186427 - G 72 -5.8 -4.45771 | AGTGCAAAATAGAAA GCAG TGAT CTGC TGCCACTTTCGCCCG Patl_3488 4187062 - 4188423 + | twin-arginine translocation pathway signal TERM 3998 4188864 - 4188876 + G 82 -7.7 -4.56597 | TTTTGCCCAGGCCCC TGCCA ATA TGGCA TTTTTAACGGCACAA Patl_3489 4188439 - 4190199 + | hypothetical protein TERM 3999 4190292 - 4190253 - f 95 -13 -3.65699 | opp_overlap 4190259 4190267, overlap 4190249 4190254 CTTACAAATAAGCAA CGAATACGTAACCCCCTC TATT GAGAGGTTTACGTATTCC CCTAAACTAAGCCCT TERM 4000 4190291 - 4190254 - f 100 -16.5 -2.78696 | opp_overlap 4190259 4190267, overlap 4190253 4190249 TTACAAATAAGCAAC GAATACGTAACCCCCTC TATT GAGAGGTTTACGTATTC CCCTAAACTAAGCCC TERM 4001 4190596 - 4190582 - g 70 -4.9 -4.54727 | opp_overlap 4190593 GCTGCCAAAGCAAAA GGCGC CACAT ACGCC GATGCCCGCATTGGC TERM 4002 4190777 - 4190763 - g 71 -7.1 -4.08394 | overlap 4190774 ATAGCGTCGCTAAAA CCGCT GAACA AGCGG TTGCCGTTGCCATGG Patl_3490 4190417 - 4192045 + | twin-arginine translocation pathway signal Patl_3491 4192072 - 4193406 + | peptidase U62, modulator of DNA gyrase TERM 4003 4193429 - 4193450 + F 100 -14.5 -3.89354 | ATTTTTGGTTTTAGA CTCAGGCTC TTAT GAGCCTGAG TTCTTCATTTCCGAC TERM 4004 4194090 - 4194080 - g 78 -5.4 -4.74103 | TCGTTAACGGAAAAA TAGC GGT GCTA TACAGCAACAAAGAC Patl_3492 4193497 - 4194207 + | twin-arginine translocation pathway signal Patl_3493 4194257 - 4195327 + | ATPase Patl_3494 4195330 - 4196232 + | hypothetical protein TERM 4005 4197274 - 4197261 - g 73 -2.3 -5.14563 | opp_overlap 4197261 GTGTTTATTAAAAAA GTAGG TCAG CCTGC ATTTCTAGCCAGCAA Patl_3495 4196235 - 4197740 + | hypothetical protein Patl_3496 4197740 - 4200142 + | hypothetical protein TERM 4006 4201029 - 4201014 - g 71 -3.3 -4.77165 | CTTGTTAGAAGAAAA CGATA TTGCTC TATCG GTTAGCCAGAATGAC TERM 4007 4201098 - 4201080 - g 72 -8.8 -3.6053 | opp_overlap 4201084 4201085 CTCTGCACAAATCAA CACTGCGC TGC GCACAGCG ATTTGGCAATCAGCC Patl_3497 4200139 - 4202292 + | hypothetical protein Patl_3498 4202969 - 4202361 - | multiple antibiotic resistance (MarC)-related proteins Patl_3499 4203727 - 4203269 - | acetyltransferase Patl_3500 4204271 - 4203804 - | ybaK/ebsC protein Patl_3501 4205530 - 4204304 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 4008 4205221 - 4205233 + g 72 -6.3 -4.20531 | opp_overlap 4205220 TTTCTACTACATGAC CAAGA TAA TCTTG TTTTACCTCGCTATG Patl_3502 4206901 - 4205570 - | peptidase M24 Patl_3503 4207483 - 4206914 - | yecA family protein TERM 4009 4207901 - 4207917 + H 79 -5.3 -5.17353 | opp_overlap 4207901 TGCACTTTTTATGAA TATTTAT TAA ATAAATA TTTTTTAGTGAATAT TERM 4010 4208276 - 4208253 - g 73 -9.7 -3.34398 | opp_overlap 4208251, overlap 4208251 CTTGGCGGGTAAATA CGCTGTTTT AAGCAA AAAACAGCG GCTGTATTACTCTGA Patl_3504 4208026 - 4208436 + | hypothetical protein Patl_3505 4208531 - 4209427 + | PfkB Patl_3506 4209449 - 4210384 + | inosine/uridine-preferring nucleoside hydrolase TERM 4011 4210403 - 4210430 + F 100 -14.3 -4.08144 | opp_overlap 4210407, overlap 4210407 TCAGGCTGTTTTGAT GAAACTGCACC CACATA GGTGCAGTTTC TTTGTCGTTAATAAA TERM 4012 4210407 - 4210426 + F 88 -9.3 -4.62622 | opp_overlap 4210407, overlap 4210403 GCTGTTTTGATGAAA CTGCACC CACATA GGTGCAG TTTCTTTGTCGTTAA TERM 4013 4210426 - 4210407 - f 80 -10 -3.72576 | opp_overlap 4210407 4210403 GCTGTTTTGATGAAA CTGCACCC ACAT AGGTGCAG TTTCTTTGTCGTTAA Patl_3507 4210540 - 4211136 + | 5-formyltetrahydrofolate cyclo-ligase TERM 4014 4211171 - 4211190 + F 71 -6.4 -4.28188 | opp_overlap 4211170 4211169 TTTGTCTTTTAAACG GTTAAGGG CCTG CCCTTACC TTTGTGTTCTCAATG Patl_3508 4211277 - 4211933 + | ribose-5-phosphate isomerase A TERM 4015 4211977 - 4211958 - f 91 -13.6 -2.79188 | opp_overlap 4211950, overlap 4211955 4211960 TAGCCAATTCAAGTA GAGCCGCT CTTT AGCGGCTC GCATGCATTTAATAG TERM 4016 4211975 - 4211960 - f 75 -10.4 -2.93991 | opp_overlap 4211950, overlap 4211958 4211955 GCCAATTCAAGTAGA GCCGCT CTTT AGCGGC TCGCATGCATTTAAT Patl_3509 4212136 - 4213173 + | hypothetical protein Patl_3510 4213576 - 4213184 - | mutator MutT protein TERM 4017 4213631 - 4213606 - R 100 -11.1 -5.81412 | opp_overlap 4213605 4213603 TTTATTCAAAAAAAA CGGGCTGCTCC TAAA GGAATAGCCCG CTCTTACTGCCTATG Patl_3511 4216399 - 4213670 - | preprotein translocase subunit SecA TERM 4018 4215885 - 4215898 + g 73 -2.3 -5.252 | opp_overlap 4215885 CCGTAAGTAATATCA GCAGC GTAG GCTTC TTTTTTCTGGGCATG Patl_3512 4217473 - 4216574 - | peptidase M23B TERM 4019 4217593 - 4217577 - R 100 -12.3 -5.63517 | opp_overlap 4217577 GTCTTAAACAAAAAA TGCCGCT TAA AGCGGCA TTTTAGTCGTAATTC TERM 4020 4217577 - 4217593 + r 100 -12.3 -4.33105 | opp_overlap 4217577 GTCTTAAACAAAAAA TGCCGCT TAA AGCGGCA TTTTAGTCGTAATTC lpxC 4218526 - 4217612 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Patl_3514 4219875 - 4218703 - | cell division protein FtsZ Patl_3515 4221188 - 4219959 - | cell division protein FtsA Patl_3516 4221971 - 4221210 - | cell division protein FtsQ TERM 4021 4221752 - 4221742 - G 76 -2.4 -5.44119 | TCTAGTTCAAAAAAA CTGC CCG GCTG GGTTTTACGTATTAA TERM 4022 4221822 - 4221833 + g 82 -7.2 -4.78107 | opp_overlap 4221821 CGACAAGGCAATATC GCGC ACTG GCGC TTTTTGCTCGTCCTC Patl_3517 4222933 - 4221977 - | D-alanine--D-alanine ligase Patl_3518 4224384 - 4222930 - | UDP-N-acetylmuramate--alanine ligase Patl_3519 4225529 - 4224381 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Patl_3520 4226985 - 4225522 - | cell division protein FtsW Patl_3521 4228307 - 4226982 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 4023 4227325 - 4227358 + g 82 -10.9 -3.53298 | CAGGTCGGTGATAGG CCATCGATGGCGGCA ATAG TGGCGCCAACGTTGG TTGCTTTGGAATCAT Patl_3522 4229399 - 4228323 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Patl_3523 4230814 - 4229399 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Patl_3524 4232403 - 4230811 - | UDP-N-acetylmuramyl-tripeptide synthetases Patl_3525 4234153 - 4232393 - | peptidoglycan glycosyltransferase TERM 4024 4232771 - 4232785 + g 71 -3.4 -4.76644 | overlap 4232751 4232772 GTCCTCGCTGAGTAC TCGCTC TTC GGGCGC TTTTTGCTCACTCTT TERM 4025 4233934 - 4233947 + g 72 -5.3 -4.55689 | CGGTTATTAAACCTC TATGC ACCG GCATA TTTTGTGTGCGTAAT Patl_3526 4234470 - 4234150 - | cell division protein FtsL TERM 4026 4234415 - 4234398 - G 82 -5.5 -5.18715 | ACAAAAACAACAAAA CCCGC ACGGGATG GCGGG CTAGGTCAGCAAGCA mraW 4235402 - 4234467 - | S-adenosyl-methyltransferase MraW Patl_3528 4235860 - 4235402 - | cell division protein MraZ TERM 4027 4236096 - 4236077 - H 70 -5.7 -4.37013 | AAGGAATTACTAAAA GTGACGC ATTTTG GCATCAC CGAAGGCAAATAAAT TERM 4028 4236691 - 4236703 + G 81 -3.3 -5.32944 | opp_overlap 4236691 CTGTATGGCTGTAAA CCTCG ACT CGACG TTTTTTGCTTGTCAA Patl_3529 4236284 - 4237096 + | short-chain dehydrogenase/reductase SDR TERM 4029 4237664 - 4237694 + G 71 -6.9 -4.1196 | GTGTACTGCTTAGCC CTGCTTCTGTACC CAGTT GGTGTAAAAGCAG TTTTACCAATGGATT Patl_3530 4237096 - 4238052 + | 2-keto-3-deoxy-galactonokinase Patl_3531 4238054 - 4238983 + | SMP-30/gluconolaconase/LRE-like region Patl_3532 4239051 - 4239785 + | GntR-like TERM 4030 4240728 - 4240739 + G 75 -3 -5.1356 | AAACCCATTATGCCC TTGA AGGC TCAA TTTTTATTGCTGGCG Patl_3533 4239824 - 4241317 + | glycerol kinase Patl_3534 4241314 - 4242396 + | aldose 1-epimerase TERM 4031 4242463 - 4242434 - T 93 -13.7 -3.01869 | opp_overlap 4242440, overlap 4242440 CACAAAGGTATAAAC GAAAAACGCTGCC ATTT GGCAGCGTTTTTT AACTAAAGCTTACTC TERM 4032 4242440 - 4242457 + T 100 -12.7 -5.08824 | opp_overlap 4242434 4242440 GGTATAAACGAAAAA CGCTGCC ATTT GGCAGCG TTTTTTAACTAAAGC TERM 4033 4242457 - 4242440 - T 100 -12.7 -5.04601 | opp_overlap 4242440, overlap 4242434 GGTATAAACGAAAAA CGCTGCC ATTT GGCAGCG TTTTTTAACTAAAGC Patl_3535 4243469 - 4242477 - | hypothetical protein TERM 4034 4243644 - 4243612 - R 91 -6.4 -5.38249 | gap 1, overlap 4243633 ATTAAGCACAAAAAA GACCATAG-AGAGTT AAAT AACTCGGCTATGGCC AATAGGAAGTCACAC Patl_3536 4244347 - 4243715 - | antibiotic biosynthesis monooxygenase Patl_3537 4245151 - 4244525 - | hypothetical protein Patl_3538 4245653 - 4245144 - | ECF subfamily RNA polymerase sigma-24 factor TERM 4035 4245383 - 4245410 + g 73 -4 -4.87803 | overlap 4245405 GAGCAGCAGCCCTAT CGATTGGCGCAC TTTC GTACACCAAACG TTTTGTTTCGCGATA Patl_3539 4246438 - 4245779 - | TonB family protein Patl_3540 4248060 - 4246624 - | hypothetical protein TERM 4036 4248352 - 4248336 - R 80 -11.5 -2.83345 | overlap 4248333 4248338 CTGATATAGTAAGTA CACGGCG CCT CGCCGCG CGATATGGACCTGAG TERM 4037 4248350 - 4248338 - R 75 -10.5 -2.96235 | overlap 4248336 4248333 GATATAGTAAGTACA CGGCG CCT CGCCG CGCGATATGGACCTG Patl_3541 4251525 - 4248496 - | response regulator receiver protein TERM 4038 4249924 - 4249938 + g 70 -10 -3.01497 | opp_overlap 4249924 GCAAACCACTAAAAA GCCCAA GCA TTGGGC TCTGGTTTCCAATGG TERM 4039 4249938 - 4249924 - G 100 -10 -4.84363 | opp_overlap 4249924 GCAAACCACTAAAAA GCCCAA GCA TTGGGC TCTGGTTTCCAATGG TERM 4040 4250528 - 4250514 - G 70 -10 -3.02144 | opp_overlap 4250518 4250521 GCAGGCTCTGTAACA TCCTCG TGG CGAGGA TCTGGCCCTGCTTTT Patl_3542 4253294 - 4251522 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Patl_3543 4257780 - 4253284 - | Hpt sensor hybrid histidine kinase TERM 4041 4255713 - 4255723 + g 80 -6.8 -4.72272 | CATCGAACCACACTT GCTC ATT GAGC TTTTTAATGCGCACC TERM 4042 4256616 - 4256626 + g 72 -8.2 -3.73775 | TAACATCTTGCACTT CGCC TTG GGCG TTTAATCGCGATAAG TERM 4043 4258011 - 4257970 - R 100 -13.1 -4.90471 | ATTGAAAATAGAAAA GCCCCTTATCGCTATGAAC CTAG GCTCAAAGTGATAAGAGGC TTACCGCATACCTCT Patl_3544 4260176 - 4258041 - | peptidase S8 and S53, subtilisin, kexin, sedolisin Patl_3545 4262384 - 4260675 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Patl_3546 4263993 - 4262437 - | PAS/PAC sensor signal transduction histidine kinase TERM 4044 4263193 - 4263209 + g 74 -3.6 -5.05228 | ATGCGGCTTTCCGCT GGCGTT GTAAA ATCGCC TTTTTATCGTTTCAT Patl_3547 4264439 - 4264023 - | response regulator receiver protein Patl_3548 4265902 - 4264442 - | periplasmic sensor signal transduction histidine kinase TERM 4045 4265428 - 4265418 - G 73 -4 -4.77165 | overlap 4265420 GTGCGCATAACAAAA GATA CAG TATC TGCAACTGGCTTCTC TERM 4046 4265643 - 4265625 - G 70 -5.2 -4.46212 | opp_overlap 4265625 TGGCGCATGATAAAA CCGTTGAC AAA ATCCACGG TATCTAAGCATTCAG TERM 4047 4265925 - 4265937 + H 83 -3.5 -5.56673 | TCTATGGGTGCGGTT TTAAA GGC TTTAA TTTTTTATTATCAAT Patl_3549 4266100 - 4266270 + | TonB-dependent receptor TERM 4048 4266324 - 4266361 + T 100 -13.5 -5.24799 | opp_overlap 4266324 4266319 TCTAATACAAGTCAA TGCCGCTCAGTTCTGTT AAGC AGAAGACCTGAGCGGCA TTTTTGTATTTATCA TERM 4049 4266361 - 4266324 - T 85 -11.4 -3.29147 | opp_overlap 4266324, overlap 4266319 TCTAATACAAGTCAA TGCCGCTCAGTTCT GTTAAGCAGA AGACCTGAGCGGCA TTTTTGTATTTATCA Patl_3550 4269629 - 4266405 - | hypothetical protein Patl_3551 4270311 - 4269712 - | hypothetical protein TERM 4050 4270629 - 4270605 - R 90 -9.3 -4.93547 | GCAAGTAACGAAAAA GCCCTGAATTA CTG CACTTCAGGGC ATAGAGTTTTACACA TERM 4051 4270693 - 4270727 + r 79 -9.5 -3.78953 | gap 1 CATGATTTGCTCAGC TTTGCTTAC-TCAGTC AACA GACTGATGAAAGCAAA TTTACTAATAGGCCT Patl_3552 4271127 - 4270741 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 4052 4271176 - 4271202 + H 70 -8.1 -3.65902 | overlap 4271178 TTCATAGTAGCCATT GACTACTGACA GCTAA TGTCAGTAGTG TTTGAATAACATAAC TERM 4053 4271178 - 4271200 + H 80 -10.7 -3.41073 | overlap 4271176 CATAGTAGCCATTGA CTACTGACA GCTAA TGTCAGTAG TGTTTGAATAACATA Patl_3553 4271250 - 4271966 + | helix-turn-helix, type 11 Patl_3554 4272598 - 4272077 - | hypothetical protein Patl_3555 4273124 - 4272618 - | hypothetical protein Patl_3556 4273696 - 4273136 - | hypothetical protein Patl_3557 4274310 - 4275128 + | hypothetical protein TERM 4054 4275758 - 4275735 - g 88 -3.8 -5.72118 | overlap 4275737 AAAAAAGATAAAAAA TACGTCGAAT TTAT AGTCGACGTG ATAGAAATGCATGCC TERM 4055 4275756 - 4275737 - g 75 -6.4 -4.42512 | overlap 4275735 AAAAGATAAAAAATA CGTCGAAT TTAT AGTCGACG TGATAGAAATGCATG TERM 4056 4277255 - 4277245 - g 80 -6.8 -4.68593 | overlap 4277246 TTGATGACGGAAAAA GTCC TTT GGAC AAGGAAGCTGCAAAT TERM 4057 4277759 - 4277781 + G 79 -7.8 -4.39002 | opp_overlap 4277759 GTGGGTGGTGAGATA TGCCCAAT CGGTTTC ATTGGGCA TTTTATGGGGAATTT Patl_3558 4275156 - 4277927 + | hypothetical protein TERM 4058 4278350 - 4278335 - f 100 -7.6 -5.76633 | opp_overlap 4278335 CCAGATACAAAAAAA CCAACT AAAA AGTTGG TTTAAATGTTTGGTA TERM 4059 4278335 - 4278350 + F 71 -7.6 -3.82208 | opp_overlap 4278335 CCAGATACAAAAAAA CCAACT AAAA AGTTGG TTTAAATGTTTGGTA TERM 4060 4278457 - 4278443 - f 100 -10 -5.76633 | opp_overlap 4278443 TCAGACACAAAAAAA CCGACT TGA AGTCGG TTTGTGTACTCTTTG TERM 4061 4278443 - 4278457 + F 89 -10 -4.15197 | opp_overlap 4278443 TCAGACACAAAAAAA CCGACT TGA AGTCGG TTTGTGTACTCTTTG TERM 4062 4279311 - 4279290 - g 76 -8.7 -4.0825 | TGCCTAACGAAAGAA GCCAACCAC CATC GCAGTTGGC GTCATCTGAACTAGC Patl_3559 4278819 - 4279325 + | RDD domain-containing protein Patl_3560 4280413 - 4279352 - | permease YjgP/YjgQ Patl_3561 4281516 - 4280410 - | permease YjgP/YjgQ TERM 4063 4282255 - 4282245 - g 79 -2.4 -5.46698 | TTGAAAACCAAAAAA GGCG AGC CGCG CAGACCATTACGTAA TERM 4064 4282501 - 4282483 - g 76 -7.4 -4.27062 | opp_overlap 4282482 TCAACGAAAAGCAAA TGGATGCC CTA GGCATGCA CTCTTACCTTGCGGT Patl_3562 4281804 - 4283309 + | leucyl aminopeptidase TERM 4065 4283427 - 4283378 - g 90 -12.9 -3.6216 | gap 1, opp_overlap 4283392 4283406, overlap 4283382 4283390 4283392 GAGCAAGAAGCAGAA GCAACCAGCCAAC-AGCCAGCGCA CCT TGCGCTGGCTTGTCAATTGGCGGC CCAGTGTTTTAGCAA TERM 4066 4283423 - 4283382 - g 90 -13.1 -3.51694 | gap 1, opp_overlap 4283392 4283406, overlap 4283378 4283390 4283392 AAGAAGCAGAAGCAA CCAGCCAAC-AGCCAGCGCA CCT TGCGCTGGCTTGTCAATTGG CGGCCCAGTGTTTTA TERM 4067 4283414 - 4283390 - g 90 -14.3 -3.1485 | opp_overlap 4283392 4283406, overlap 4283382 4283378 4283392 GAAGCAACCAGCCAA CAGCCAGCGCA CCT TGCGCTGGCTT GTCAATTGGCGGCCC TERM 4068 4283392 - 4283412 + G 100 -16.9 -3.41878 | opp_overlap 4283390 4283382 4283378 4283392, overlap 4283406 AGCAACCAGCCAACA GCCAGCGCA CCT TGCGCTGGC TTGTCAATTGGCGGC TERM 4069 4283412 - 4283392 - g 100 -16.9 -3.12862 | opp_overlap 4283392 4283406, overlap 4283390 4283382 4283378 AGCAACCAGCCAACA GCCAGCGCA CCT TGCGCTGGC TTGTCAATTGGCGGC Patl_3563 4283336 - 4283806 + | DNA polymerase III chi subunit, HolC TERM 4070 4284150 - 4284125 - g 76 -7.5 -4.27584 | opp_overlap 4284125 ACGCCCAAGGTAAAA CCCGTCACGAC TTAG GTCGTGAAGCG TTCGTTGAAAAAATT TERM 4071 4285951 - 4285939 - g 72 -4.7 -4.60041 | overlap 4285940 ACTGACGCGCAAAAA CGCGG TAC CCGCC ATACATTGGTCAATG TERM 4072 4286523 - 4286485 - g 71 -3.3 -4.90266 | gap 1, overlap 4286478 4286474 TTGAGCAACGAAAAA TTCGTTAGCAATGCACCA CCAG CGGT-CATTGATAAAGAA AAAGCCAAGCTTGAT valS 4283833 - 4286598 + | valyl-tRNA synthetase TERM 4073 4286609 - 4286634 + F 100 -16.2 -4.18488 | TGTAAGTAGTCCCTC CTGCGCAGGC CTACTT GCCTGCGCAG TTTATTGCCGTCGAT TERM 4074 4286963 - 4286974 + F 73 -2.2 -5.19328 | overlap 4286957 ACTTTTGTGCATCAG CATG CTGA CGTG TTTTTCTTATAAAGT Patl_3565 4286964 - 4288439 + | 5'-nucleotidase-like TERM 4075 4288669 - 4288683 + G 71 -10 -3.23452 | overlap 4288665 4288680 ATCACTGCCCTTTCA GCCATC AGT GATGGC TTGAGTTATGCCAAT Patl_3566 4288432 - 4290117 + | diguanylate cyclase TERM 4076 4290152 - 4290134 - T 100 -10.3 -5.75945 | opp_overlap 4290134 ATCGCGCAAAAAAAA CGTCGCA AATCA TGCGACG TTATAAATTAGTGAG TERM 4077 4290134 - 4290152 + T 77 -10.3 -3.43676 | opp_overlap 4290134 ATCGCGCAAAAAAAA CGTCGCA AATCA TGCGACG TTATAAATTAGTGAG Patl_3567 4290693 - 4290160 - | hypothetical protein TERM 4078 4290362 - 4290352 - G 74 -8.2 -3.8698 | CAACTCAAAGCTAAA CGCG ATG CGCG GAATATCAATACTTT Patl_3568 4292466 - 4291096 - | hypothetical protein TERM 4079 4292754 - 4292767 + G 70 -2.4 -5.0538 | overlap 4292745 4292747 AGCTAGGCGCAAAGT GCAT TTTGCT ATGC TTTTTTACCCTCGCA TERM 4080 4293302 - 4293276 - g 76 -8.8 -3.67976 | overlap 4293287 GGCATCAATTTGAAA TTAGCTACCAAC ACC ATTGGTCGCTAA ACGAGTGGCAAGTTA Patl_3569 4292717 - 4293595 + | MltA-interacting MipA Patl_3570 4293635 - 4294015 + | hypothetical protein Patl_3571 4294015 - 4294713 + | two component transcriptional regulator TERM 4081 4295907 - 4295928 + G 72 -6.5 -4.20368 | opp_overlap 4295907 CTGCCAAGTACACGA TTCAGCGCT GGGC GGCGCTGCA TTTGTATTGCGCTAC Patl_3572 4294723 - 4295976 + | periplasmic sensor signal transduction histidine kinase Patl_3573 4296136 - 4297563 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 4082 4297778 - 4297760 - g 73 -7.4 -4.04295 | TGAAGCACAACTAAA CGAAGAGC ACA GCTTTTCG TTAGAACTCGCTGAA Patl_3574 4297563 - 4298528 + | serine/threonine protein kinase Patl_3575 4298662 - 4299285 + | DSBA oxidoreductase TERM 4083 4299354 - 4299326 - f 83 -7.4 -4.72986 | opp_overlap 4299326 CATGCTGACTAAAAA GCCCCAAAAGCA CTTGC TGTTTTAGGGGC TTTTTTTATGGCCAT TERM 4084 4299326 - 4299354 + F 100 -9.6 -5.61596 | opp_overlap 4299326 CATGCTGACTAAAAA GCCCCAAAAGCA CTTGC TGTTTTAGGGGC TTTTTTTATGGCCAT Patl_3576 4299616 - 4301070 + | diguanylate cyclase Patl_3577 4301722 - 4301054 - | uracil-DNA glycosylase TERM 4085 4301464 - 4301479 + g 73 -4.6 -4.91109 | opp_overlap 4301464 TGTTTTTCAAAGAAG GGGGTG TTTT CACGCC TTTTTGTACTGAAAA TERM 4086 4301496 - 4301531 + g 78 -11.8 -3.01924 | opp_overlap 4301495 4301502 TTTTGTACTGAAAAG CTCAAACCATGGGCCT GATT AGGCCCGTGGTAAGGG TCTTGCCCAAGAATA TERM 4087 4301525 - 4301502 - G 93 -12.4 -3.76815 | opp_overlap 4301496, overlap 4301495 ACTGAAAAGCTCAAA CCATGGGCCT GATT AGGCCCGTGG TAAGGGTCTTGCCCA TERM 4088 4301773 - 4301749 - R 80 -7.9 -4.39426 | overlap 4301750 4301751 TATAGCGTTATAAAA CCGCTTAGCCT AGT AGGCTAAACAA GTGCTTTTTCAACAC TERM 4089 4301772 - 4301750 - R 70 -9.2 -3.23174 | overlap 4301749 4301751 ATAGCGTTATAAAAC CGCTTAGCCT AGT AGGCTAAACA AGTGCTTTTTCAACA TERM 4090 4301771 - 4301751 - R 72 -10.5 -2.53422 | overlap 4301750 4301749 TAGCGTTATAAAACC GCTTAGCCT AGT AGGCTAAAC AAGTGCTTTTTCAAC Patl_3578 4303036 - 4301753 - | threonine synthase Patl_3579 4304080 - 4303085 - | homoserine kinase thrA 4306542 - 4304080 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 4091 4304261 - 4304239 - G 80 -9.8 -3.96148 | overlap 4304243 TTCTTTGATCACAAA CAGAGGGTGA TCC TCACCCACCG CCTGTATCGAGACTA TERM 4092 4304257 - 4304243 - G 73 -10 -3.36228 | overlap 4304239 TTGATCACAAACAGA GGGTGA TCC TCACCC ACCGCCTGTATCGAG TERM 4093 4306635 - 4306653 + r 89 -10.2 -4.27033 | opp_overlap 4306635 CTAAATAACAAAAAA GCCCGCTA TAT TTGCGGGC TTTATGTCTGTTTTA TERM 4094 4306653 - 4306635 - R 100 -10.2 -5.72254 | opp_overlap 4306635 CTAAATAACAAAAAA GCCCGCTA TAT TTGCGGGC TTTATGTCTGTTTTA TERM 4095 4306775 - 4306803 + r 80 -8.2 -4.36348 | opp_overlap 4306777, overlap 4306767 4306771 TCAATTTGCCGTATA GACGTCTATATG TCAAC CGTCTAGACGTC TTGTTTTGATATTTT TERM 4096 4307113 - 4307141 + r 83 -3.1 -5.58209 | overlap 4307115 TATTTCCACTTCACG CGCGATAGCTATA ACC TATAACTAGCGAG TTTTTTTAACTTTAC Patl_3581 4308621 - 4307236 - | glucose-1-phosphate adenylyltransferase Patl_3582 4309209 - 4308709 - | heat shock protein Hsp20 Patl_3583 4309943 - 4311136 + | GAF sensor signal transduction histidine kinase TERM 4097 4311242 - 4311209 - f 84 -6.7 -4.86773 | overlap 4311218 TAAAACGACTAAAAA TCTTGAATAGGGCTG TCAT CAGCCCTGCCCAATA CGACTTGATAAAGGC TERM 4098 4311233 - 4311218 - f 75 -10.4 -3.10589 | overlap 4311209 TAAAAATCTTGAATA GGGCTG TCAT CAGCCC TGCCCAATACGACTT Patl_3584 4312079 - 4313320 + | radical SAM family protein TERM 4099 4313703 - 4313719 + G 75 -2.9 -5.12707 | GCGGTAAAACGTGAT GCATACA AAA TGAGTGC TTTTTTGAGGTTTAG Patl_3585 4313337 - 4314131 + | putative DNA polymerase related protein Patl_3586 4314929 - 4314183 - | hypothetical protein Patl_3587 4316658 - 4315354 - | hypothetical protein TERM 4100 4315558 - 4315573 + g 76 -9 -3.72588 | opp_overlap 4315557 4315558, overlap 4315557 ATAATTCACAGTAAT TGGAGC AGGT GCTCCA TTTGCATCTAAATTA TERM 4101 4317942 - 4317961 + G 71 -10 -3.28712 | gap 1 CGTAGGTATTGGACT TGCC-GCCG CAT CGGCAGGCA TTCTAGCAAGAAAAA Patl_3588 4317862 - 4318146 + | hypothetical protein TERM 4102 4318928 - 4318918 - g 79 -8.2 -4.28762 | opp_overlap 4318918 AGAAGTTGACCAAAA GCGC ACA GCGC TAGTTAAAGCAATAG Patl_3589 4318553 - 4320739 + | hypothetical protein TERM 4103 4321108 - 4321124 + T 85 -8.7 -4.34402 | AAGAAACACCTTCTT GTATGGC AAA GCCATGC TTTTGATGTACCGCG TERM 4104 4321370 - 4321359 - T 85 -5.8 -5.24129 | TGCTGGGAGAAAAAA GCCA TGGA TGGC GGTAAGCGAAGCGCA Patl_3590 4324315 - 4321406 - | glycine dehydrogenase TERM 4105 4322123 - 4322099 - G 82 -7.9 -4.56775 | ATGGTTTGGCAAAAA CGGGGCTAAAT GGG ATTTAACACCG ATTGGCCCCATACCT TERM 4106 4324506 - 4324480 - R 100 -13.9 -4.18506 | opp_overlap 4324480 4324484, overlap 4324484 CCATCGTTAAAACAA CAAAGAGCAAC ACTAG GTTGCTCTTTG TATTAACGAATACTT TERM 4107 4324480 - 4324506 + r 93 -13.9 -3.03619 | opp_overlap 4324480 4324484, overlap 4324484 CCATCGTTAAAACAA CAAAGAGCAAC ACTAG GTTGCTCTTTG TATTAACGAATACTT TERM 4108 4324502 - 4324484 - R 89 -8.9 -4.67697 | opp_overlap 4324480 4324484, overlap 4324480 CGTTAAAACAACAAA GAGCAAC ACTAG GTTGCTC TTTGTATTAACGAAT TERM 4109 4324484 - 4324502 + r 85 -8.9 -4.19177 | opp_overlap 4324484 4324480, overlap 4324480 CGTTAAAACAACAAA GAGCAAC ACTAG GTTGCTC TTTGTATTAACGAAT Patl_3591 4324909 - 4324520 - | glycine cleavage system protein H gcvT 4326061 - 4324982 - | glycine cleavage system aminomethyltransferase T Patl_3593 4326203 - 4327054 + | LysR family transcriptional regulator Patl_3594 4328823 - 4327750 - | putative general secretion pathway protein A Patl_3595 4329699 - 4329049 - | hemolysin III family channel protein Patl_3596 4330649 - 4329783 - | hypothetical protein TERM 4110 4330778 - 4330743 - R 76 -6.9 -4.44211 | gap 2, overlap 4330740 4330744 4330745 CCTAACAGAAAACAA GCCCCTTAGGCGCGCAG CTTG CTGCG-ACCTA-GGGGT GTCCACTCGAATCGG TERM 4111 4330777 - 4330744 - R 75 -10.4 -3.25442 | gap 2, overlap 4330740 4330743 4330745 CTAACAGAAAACAAG CCCCTTAGGCGCGCAG CTTG CTGCG-ACCTA-GGGG TGTCCACTCGAATCG TERM 4112 4330777 - 4330745 - R 76 -10.6 -2.54181 | gap 1, overlap 4330740 4330744 4330743 TAACAGAAAACAAGC CCCTTAGGCGCGCAG CTTG CTGCG-ACCTAGGGG TGTCCACTCGAATCG Patl_3597 4334001 - 4330795 - | acriflavin resistance protein TERM 4113 4331851 - 4331863 + g 79 -9.1 -4.08394 | overlap 4331859 GTCGTCAATGCCATT CACCC CTG GGGTG TTTTCAAGACGCTCT TERM 4114 4333263 - 4333239 - G 100 -14.5 -3.83318 | TGGTTAACAATACAA TATTGGCAAAG TCG CTTTGCCAATA AGCCTGATTAGCGGC Patl_3598 4335239 - 4333998 - | RND family efflux transporter MFP subunit TERM 4115 4334594 - 4334610 + g 73 -10.9 -2.6462 | overlap 4334593 4334592 CCGTGCTGTTAAGTG TGGCGAT AGT ATCGCCA ATATTTACGTAGCTG TERM 4116 4335126 - 4335154 + g 75 -6.6 -4.40572 | gap 1, overlap 4335149 AACCTTCGTCTCTGC TGGGCGCG-GCGC ATTA GCGCTCTCGGCCA TTTTGTAGCCGTTAT Patl_3599 4336594 - 4335236 - | RND efflux system outer membrane lipoprotein TERM 4117 4335471 - 4335482 + g 74 -5.8 -4.58213 | TTAAGGGATTGCTCT TGCC CTAA GGCA TTTTCTACTTCGTTA Patl_3600 4336676 - 4337155 + | excinuclease ABC subunit C TERM 4118 4337190 - 4337175 - f 71 -6.2 -4.16279 | TATATTAGCCGAAAA GTAATG TCGT CATTAC GGATCCCCAAATAGG Patl_3601 4337214 - 4340114 + | glutamate-ammonia-ligase adenylyltransferase Patl_3602 4340742 - 4340125 - | hypothetical protein TERM 4119 4340701 - 4340676 - G 77 -11.9 -2.81413 | gap 1, overlap 4340671 4340673 4340661 4340692 CAGCAATTAATATGA GCGCCA-GCGCT AAT AACGCGTGGCGC CACCATACAAATGAC Patl_3603 4341765 - 4340833 - | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TERM 4120 4343196 - 4343179 - g 80 -5.5 -4.9218 | overlap 4343180 CACCGAGCAGAAAAA TGCAGAG TTAG CTCTGCT TAAAGCCAATAAGAT TERM 4121 4343195 - 4343180 - g 72 -9 -3.54585 | overlap 4343179 ACCGAGCAGAAAAAT GCAGAG TTAG CTCTGC TTAAAGCCAATAAGA TERM 4122 4343322 - 4343303 - g 71 -3.5 -4.89393 | CAAACTGTAGAAAAA GCATTGG GCTATA CCAAAGC AGAACTAAAACAAAG TERM 4123 4344713 - 4344737 + G 80 -7.2 -4.71426 | gap 2 TTTAGTCCGTTGTTT CCTG-AGC-GCG AAG CGCCGCTGCAGG TTTTATTGGTAGACG TERM 4124 4345249 - 4345237 - g 89 -9.1 -4.61231 | TGAGATGCTTAAAAA GCTGC ACT GCAGC GTACAGGTGGCTGAG Patl_3604 4342028 - 4345546 + | PAS/PAC sensor hybrid histidine kinase Patl_3605 4345827 - 4345570 - | hypothetical protein TERM 4125 4345740 - 4345759 + g 70 -5 -4.54477 | CGGTGACGCCACCCA GAAAGTAG CCAT CTCCTTTC TTTTCTCCGTTTTCA TERM 4126 4346095 - 4346079 - R 77 -5.1 -4.87291 | overlap 4346080 CAGTGCAACGAAAAA GTCACTC ACC GAGTGAT ACAAAAAAGCCACTG TERM 4127 4346094 - 4346080 - R 72 -8.6 -3.51651 | overlap 4346079 AGTGCAACGAAAAAG TCACTC ACC GAGTGA TACAAAAAAGCCACT TERM 4128 4346124 - 4346104 - R 95 -8.3 -5.38047 | GAGTGATACAAAAAA GCCACTG GAAAAAA CAGTGGC TTACAAGTTTGCATA Patl_3606 4347424 - 4346165 - | beta-lactamase Patl_3607 4347832 - 4347602 - | ChaB Patl_3608 4348983 - 4348039 - | hypothetical protein Patl_3609 4349803 - 4349036 - | protein of unknown function DUF610, YibQ TERM 4129 4349120 - 4349136 + g 89 -6.5 -5.44119 | CTGTACATCGTCTTG GGCTAAC GTT GGTAGCC TTTTTTTCAGGTAGG TERM 4130 4349592 - 4349608 + g 78 -5.8 -4.75174 | overlap 4349594 TCTCGGTGCTGCTCG TGCGCC ATCAG GGCGTA TTTTTGGCTTAGATG Patl_3610 4350911 - 4349820 - | peptidase M23B TERM 4131 4350617 - 4350650 + g 78 -5.4 -4.76041 | gap 1, opp_overlap 4350617, overlap 4350620 TAAACGCGCTACGAA TTTGCCTAGCTAACA CATCT TGTT-GCTGGGCTAA TTTTTGCTGAATATC TERM 4132 4350905 - 4350941 + g 95 -14.8 -3.55444 | gap 1, opp_overlap 4350905 4350915, overlap 4350910 4350915 TGGGTGACAAGCAAA CAAACAAAAAGCACCAT AAGC ATGGTGC-TTTTGTTTG TTTCAACCATAACAA TERM 4133 4350941 - 4350905 - G 100 -14.8 -3.9941 | gap 1, opp_overlap 4350905 4350910 4350915, overlap 4350915 TGGGTGACAAGCAAA CAAACAAAAAGCACCAT AAGC ATGGTGC-TTTTGTTTG TTTCAACCATAACAA TERM 4134 4350910 - 4350937 + g 90 -10 -4.42062 | opp_overlap 4350905 4350915, overlap 4350905 4350915 GACAAGCAAACAAAC AAAAAGCACCAT AAGC ATGGTGCTTTTG TTTGTTTCAACCATA TERM 4135 4350932 - 4350915 - R 100 -9.9 -5.5454 | opp_overlap 4350915 4350910 4350905, overlap 4350905 GCAAACAAACAAAAA GCACCAT AAGC ATGGTGC TTTTGTTTGTTTCAA TERM 4136 4350915 - 4350932 + r 100 -9.9 -5.18866 | opp_overlap 4350905 4350915, overlap 4350910 4350905 GCAAACAAACAAAAA GCACCAT AAGC ATGGTGC TTTTGTTTGTTTCAA Patl_3611 4352509 - 4350974 - | phosphoglyceromutase TERM 4137 4351205 - 4351216 + g 82 -5.8 -5.18357 | opp_overlap 4351205 AGCTGTGATCAAGCA GTCG CCAC CGAC TTTTTTGATGGCTTC Patl_3612 4352780 - 4353205 + | rhodanese-like protein Patl_3613 4353224 - 4353481 + | glutaredoxin 3 Patl_3614 4353504 - 4354013 + | preprotein translocase subunit SecB TERM 4138 4354046 - 4354077 + G 83 -6.4 -4.96848 | overlap 4354050 CAAACAGTTTCAGTG TTAGGGGCGGGGTC GTAT GGCACCGCCCTTGC TTTTTGTCTGGCCAG TERM 4139 4354050 - 4354073 + G 95 -11.6 -3.91281 | overlap 4354046 CAGTTTCAGTGTTAG GGGCGGGGTC GTAT GGCACCGCCC TTGCTTTTTGTCTGG Patl_3615 4354025 - 4355023 + | glycerol-3-phosphate dehydrogenase (NAD(P)+) TERM 4140 4355098 - 4355125 + T 100 -21.4 -4.65895 | opp_overlap 4355098 GAGATACCAAAAAAA GCCGAGGGAAGC ATAT GCTTCCCTCGGC TTTTTAACTCAGCGC TERM 4141 4355125 - 4355098 - T 100 -21.4 -5.60864 | opp_overlap 4355098 GAGATACCAAAAAAA GCCGAGGGAAGC ATAT GCTTCCCTCGGC TTTTTAACTCAGCGC Patl_3616 4355603 - 4355160 - | YiaAB two helix Patl_3617 4356665 - 4355808 - | hypothetical protein Patl_3618 4356898 - 4356665 - | hypothetical protein Patl_3619 4357223 - 4357990 + | XRE family transcriptional regulator Patl_3620 4358876 - 4358103 - | hypothetical protein Patl_3621 4359596 - 4359099 - | hypothetical protein TERM 4142 4359803 - 4359786 - H 76 -7.1 -4.25283 | ATTTGTTGATTAAAA TGTTGTA ATTT TACAACA TAATGAATTCGAGGT Patl_3622 4359823 - 4360776 + | transaldolase B TERM 4143 4360796 - 4360811 + F 100 -6.8 -6.0458 | opp_overlap 4360796 AACAGCATCAAAAGA GCGTCT GTTT AGGCGC TTTTTTTTACTTTAT TERM 4144 4362409 - 4362397 - g 71 -7.7 -3.98745 | opp_overlap 4362397 GAATTAGGCAAAGAA CTTGG CAA CCAAG TGTTAGATAAAATTG pgi 4360858 - 4362501 + | glucose-6-phosphate isomerase TERM 4145 4362529 - 4362544 + T 100 -9 -5.9663 | opp_overlap 4362529 AATACCACTAAAAAA GAGACC CTAG GGTCTC TTTTTTTTGCTGTTT TERM 4146 4362544 - 4362529 - T 93 -9 -5.2112 | opp_overlap 4362529 AATACCACTAAAAAA GAGACC CTAG GGTCTC TTTTTTTTGCTGTTT Patl_3624 4363691 - 4362600 - | hypothetical protein Patl_3625 4364765 - 4363701 - | secretion protein HlyD Patl_3626 4365250 - 4364768 - | MarR family transcriptional regulator TERM 4147 4365184 - 4365162 - G 72 -10.6 -2.9186 | ACCGAATGGGATATA GCACTTCGCC ACA GGCGAAATAC ACGCCCTAACAACCA Patl_3627 4365763 - 4367997 + | TonB-dependent receptor TERM 4148 4368089 - 4368116 + T 100 -16.4 -4.12037 | opp_overlap 4368089 TAATCCAATAAAAAA GGCGCTAAACCT GCAC GGGTTTAGCGCC TTTCTCGTGTTTCTC TERM 4149 4368116 - 4368089 - T 100 -15.7 -5.5074 | opp_overlap 4368089 TAATCCAATAAAAAA GGCGCTAAACC TGCACG GGTTTAGCGCC TTTCTCGTGTTTCTC Patl_3628 4369269 - 4368142 - | aminotransferase, class I and II TERM 4150 4368236 - 4368252 + g 76 -4.3 -5.07486 | opp_overlap 4368231 CCAAAATCGATACCG GGTGATG GCC CGACACC TTTTTCTTCAAAATA Patl_3629 4369678 - 4369289 - | response regulator receiver protein Patl_3630 4372092 - 4369732 - | DNA polymerase II TERM 4151 4370984 - 4370969 - G 82 -6.8 -4.77079 | TACAGATTAACAAAA GCGGCT ACTG AGCCAC CCACGCGATTTAATT Patl_3631 4373995 - 4372109 - | diguanylate cyclase TERM 4152 4374347 - 4374364 + r 73 -6.9 -4.15044 | opp_overlap 4374347 4374349 AGCCAGATAAAAAAA TAGCCCC AAAA GGGGCCA TTTCTTAAGGAGCAA TERM 4153 4374364 - 4374347 - R 100 -9.1 -5.72616 | opp_overlap 4374347, overlap 4374349 AGCCAGATAAAAAAA TAGCCCC AAAA GGGGCCA TTTCTTAAGGAGCAA TERM 4154 4374362 - 4374349 - R 91 -9.5 -4.50122 | opp_overlap 4374347, overlap 4374347 CCAGATAAAAAAATA GCCCC AAAA GGGGC CATTTCTTAAGGAGC Patl_3632 4374848 - 4374453 - | hypothetical protein TERM 4155 4375028 - 4375017 - H 73 -2.2 -5.1925 | GGATAATTTAAAAAA TCGC AAAT GCAA AGCGTTCCCTTAGCG TERM 4156 4375653 - 4375638 - g 77 -10.4 -3.36327 | GGATCGCATGTATAA CCCAGC ACTT GCTGGG GGCTGCCTATTGGAT Patl_3633 4375084 - 4376163 + | oxidoreductase-like rbgA 4377172 - 4376168 - | ribosomal biogenesis GTPase TERM 4157 4376224 - 4376236 + g 75 -2.6 -5.24531 | CGCGCTCAATACGGT GCTC TTTCT GGGC TTTTTTATCACGCGT TERM 4158 4376270 - 4376287 + g 79 -4.1 -5.25772 | opp_overlap 4376270 CGAGCCAGTTTTAAA GCGCT CTTTACGC AGCGC TTTTTCTTCTGCTTT Patl_3635 4377530 - 4379785 + | TonB-dependent receptor, plug TERM 4159 4379829 - 4379844 + F 100 -11.8 -5.54885 | opp_overlap 4379825 TAAACAACAATTTTA GGGGCC GAAA GGCCCC TTTTTTATTGCTGTT TERM 4160 4380005 - 4380022 + G 70 -4.8 -4.46854 | GCAGATGTTCCTGTT GTGCGC TTTGTT GTGCAC TTTGTTGTTCAATGC Patl_3636 4379994 - 4380395 + | hypothetical protein TERM 4161 4380439 - 4380423 - f 73 -2.2 -5.32396 | opp_overlap 4380425, overlap 4380425 ATACTAAAAATAAAA TGTGCC CAAAT GGCATA CGTTAACTATTGCGA Patl_3637 4380469 - 4381527 + | hypothetical protein TERM 4162 4381550 - 4381589 + F 80 -7.8 -4.39407 | opp_overlap 4381552, overlap 4381551 4381552 CAGCAACGTTCAAGC AACCCAGCAGCTCGCTTA CTCG TAAGAGAGCTACTGGGCG TTTTCCGTTATTTCA TERM 4163 4381551 - 4381588 + F 82 -11.3 -3.2256 | opp_overlap 4381552, overlap 4381550 4381552 AGCAACGTTCAAGCA ACCCAGCAGCTCGCTTA CTCG TAAGAGAGCTACTGGGC GTTTTCCGTTATTTC TERM 4164 4381552 - 4381587 + F 95 -14.8 -2.52451 | opp_overlap 4381552, overlap 4381551 4381550 GCAACGTTCAAGCAA CCCAGCAGCTCGCTTA CTCG TAAGAGAGCTACTGGG CGTTTTCCGTTATTT TERM 4165 4381587 - 4381552 - f 100 -17 -3.35867 | opp_overlap 4381551 4381550 4381552 GCAACGTTCAAGCAA CCCAGCAGCTCGCTTA CTCG TAAGAGAGCTACTGGG CGTTTTCCGTTATTT TERM 4166 4381997 - 4381983 - f 73 -2.2 -5.28826 | AAATTGGACAAAAAA TAAAAT AAA ATTTCA GCCAAAAGATACTCT Patl_3638 4382227 - 4385208 + | TonB-dependent receptor TERM 4167 4385267 - 4385295 + F 76 -4.6 -5.08601 | opp_overlap 4385266 4385268 4385270, overlap 4385270 TTACTCACAAAGAAC ATAGAGCCTATT CATGC AATAGGCTCTTC TTTTTATTCGAGTAC TERM 4168 4385294 - 4385268 - f 70 -8.1 -3.63766 | opp_overlap 4385267 4385270, overlap 4385266 4385270 TACTCACAAAGAACA TAGAGCCTATT CATGC AATAGGCTCTT CTTTTTATTCGAGTA TERM 4169 4385292 - 4385270 - f 80 -10.7 -3.38699 | opp_overlap 4385267 4385270, overlap 4385268 4385266 CTCACAAAGAACATA GAGCCTATT CATGC AATAGGCTC TTCTTTTTATTCGAG TERM 4170 4385270 - 4385292 + F 91 -10.7 -4.63592 | opp_overlap 4385270 4385268 4385266, overlap 4385267 CTCACAAAGAACATA GAGCCTATT CATGC AATAGGCTC TTCTTTTTATTCGAG TERM 4171 4386021 - 4386011 - g 75 -3.2 -5.24531 | ATTTCTTATAAAAAA TGGC CAA ACCA CTCAACAGGGTCGGT Patl_3639 4385393 - 4386520 + | Poly(beta-D-mannuronate) lyase Patl_3640 4386604 - 4388874 + | Poly(beta-D-mannuronate) lyase Patl_3641 4389008 - 4389769 + | short-chain dehydrogenase/reductase SDR TERM 4172 4389752 - 4389774 + F 87 -12.8 -3.37589 | overlap 4389772 CTGGATATTAACGGT GGCGTTTACA ACA TGTAAGCGCC TTATGGGCATTTTTA Patl_3642 4389803 - 4390237 + | RbsD or FucU transport Patl_3643 4390339 - 4391577 + | natural resistance-associated macrophage protein Patl_3644 4391600 - 4392088 + | carbohydrate kinase Patl_3645 4392160 - 4393233 + | alginate lyase TERM 4173 4393264 - 4393304 + T 75 -5.6 -4.78752 | gap 1, opp_overlap 4393264 TCAAACAGCAAAAAA GCCATCAAATCAGCCGT TATTAAGT ACG-CTAGTTTGATGGC TTTTTGCGTTGTGAT TERM 4174 4393304 - 4393264 - T 85 -5.6 -5.32699 | gap 1, opp_overlap 4393264 TCAAACAGCAAAAAA GCCATCAAATCAGCCGT TATTAAGT ACG-CTAGTTTGATGGC TTTTTGCGTTGTGAT TERM 4175 4393358 - 4393346 - T 70 -7.7 -3.69333 | opp_overlap 4393340 4393338, overlap 4393350 TATAAGCGAGCTAAA CAAGC AGC GCTTG CTAGCTATTTTCTAG Patl_3646 4394525 - 4393404 - | phosphomannose isomerase-like Patl_3647 4395889 - 4394633 - | natural resistance-associated macrophage protein TERM 4176 4395176 - 4395165 - G 85 -5.8 -5.34055 | opp_overlap 4395174 4395175, overlap 4395173 4395175 ATAAACATTAAAAAA GCTG AGAA CAGC GCATCGCGATTTTGA Patl_3648 4397209 - 4396010 - | mannonate dehydratase Patl_3649 4398709 - 4397252 - | mannitol dehydrogenase Rossman-like TERM 4177 4398894 - 4398884 - H 72 -3.2 -5.08011 | AAAAGCGGTAAAAAA GTCG ACC CAAC ACCACCCTGCGACTA TERM 4178 4399051 - 4399029 - H 74 -6.3 -4.37737 | overlap 4399031 TAACCAAAAATTAAA TAGCCTAGT TTTAT ACTAGGCTC TGAGCAAATCAAGAA TERM 4179 4399049 - 4399031 - H 76 -8.9 -3.76474 | overlap 4399029 ACCAAAAATTAAATA GCCTAGT TTTAT ACTAGGC TCTGAGCAAATCAAG Patl_3650 4399376 - 4402414 + | TonB-dependent receptor TERM 4180 4402463 - 4402501 + F 100 -15.4 -3.57462 | opp_overlap 4402463 4402468, overlap 4402466 ATACGCAAGTAAAAG TAAAAGCCAACCCCAGCG CAG TGCTGGGGTTAGCTGTTA TTTACGACTCAACTA TERM 4181 4402501 - 4402463 - f 100 -16.9 -3.26006 | opp_overlap 4402463 4402466, overlap 4402468 ATACGCAAGTAAAAG TAAAAGCCAACCCCAGC GCAGT GCTGGGGTTAGCTGTTA TTTACGACTCAACTA TERM 4182 4402466 - 4402498 + F 93 -12.7 -3.92542 | opp_overlap 4402463 4402468, overlap 4402463 CGCAAGTAAAAGTAA AAGCCAACCCCAGCG CAG TGCTGGGGTTAGCTG TTATTTACGACTCAA TERM 4183 4402496 - 4402468 - f 100 -16.8 -4.72729 | opp_overlap 4402466 4402463, overlap 4402463 CAAGTAAAAGTAAAA GCCAACCCCAGC GCAGT GCTGGGGTTAGC TGTTATTTACGACTC TERM 4184 4402823 - 4402833 + G 77 -6.8 -4.50627 | opp_overlap 4402823 GTCAGACAGAACTTA GGCA ATG TGCC TTTATTTGATGCCTC TERM 4185 4404855 - 4404828 - g 73 -7.8 -4.12942 | opp_overlap 4404820 TTAAAGGCGTTAAAA GCGTATTTATTC TAGC GAACAAAGACGC CACGAAAAGCAAACA Patl_3651 4402691 - 4404937 + | heparinase II/III-like TERM 4186 4404997 - 4405025 + T 100 -8.9 -5.62288 | opp_overlap 4404997 CCAACAGTCAAAAAA GGGTGATTACC ACTAACA GGCAATCACCC TTTTTCTTTTATTGG TERM 4187 4405025 - 4404997 - T 93 -11.1 -5.1615 | opp_overlap 4404997 CCAACAGTCAAAAAA GGGTGATTACC ACTAACA GGCAATCACCC TTTTTCTTTTATTGG Patl_3652 4406230 - 4405076 - | cation diffusion facilitator family transporter TERM 4188 4405280 - 4405257 - G 71 -3.8 -4.81083 | opp_overlap 4405276 TCTAATGACCAAAAA TGTAGATGGT GTAT ACCGTCAACA AACGCTATTTGTTGT Patl_3653 4406248 - 4406658 + | hypothetical protein TERM 4189 4406732 - 4406771 + T 100 -21 -2.96031 | opp_overlap 4406737, overlap 4406737 TCTCAAACCCACATA AAAAAGCCCTCTTGGCAT ACTA ATGCCAAGAGGGCTTTTC GTTGTTTGGAGTGAA TERM 4190 4406737 - 4406766 + T 100 -20.9 -4.62203 | opp_overlap 4406737, overlap 4406732 AACCCACATAAAAAA GCCCTCTTGGCAT ACTA ATGCCAAGAGGGC TTTTCGTTGTTTGGA TERM 4191 4406766 - 4406737 - T 100 -20.9 -5.38951 | opp_overlap 4406737 4406732 AACCCACATAAAAAA GCCCTCTTGGCAT ACTA ATGCCAAGAGGGC TTTTCGTTGTTTGGA TERM 4192 4406830 - 4406804 - T 70 -8.8 -3.41073 | overlap 4406802 4406806 TACGTCATCCAAACA CAGGCAGATTAA TCA TTAAACTGCCTA ACGATACTGCTCAGT TERM 4193 4406828 - 4406806 - T 72 -9.2 -3.27408 | overlap 4406804 4406802 CGTCATCCAAACACA GGCAGATTAA TCA TTAAACTGCC TAACGATACTGCTCA Patl_3654 4408197 - 4406812 - | NAD(P) transhydrogenase, beta subunit Patl_3655 4408491 - 4408210 - | putative NAD(P) transhydrogenase subunit alpha TERM 4194 4408410 - 4408377 - G 74 -8.1 -3.89346 | opp_overlap 4408386 4408401 CTGTGATCCCAGAAA TCGCATTCGCCCCTG ACAT CAAGGGTGTATGCAA AGTAGCAGGCACTTT Patl_3656 4409660 - 4408491 - | alanine dehydrogenase/PNT-like TERM 4195 4409596 - 4409627 + g 73 -7.4 -4.05788 | gap 1, opp_overlap 4409599 4409606, overlap 4409597 4409599 TATGCCTTTACGTTA ACAGGT-AAAAGCGC ACA GCGTTTTTCACCTGC TTTCATTTCAGCCGG TERM 4196 4409597 - 4409626 + g 75 -10.9 -3.03151 | gap 1, opp_overlap 4409599 4409606, overlap 4409596 4409599 ATGCCTTTACGTTAA CAGGT-AAAAGCGC ACA GCGTTTTTCACCTG CTTTCATTTCAGCCG TERM 4197 4409716 - 4409696 - R 77 -10.5 -3.36803 | opp_overlap 4409707, overlap 4409707 4409710 CAATTTGACTCACAA CAGTGCACA AAC TATGCACTG CTCGAGTGCAAGTTA Patl_3657 4410739 - 4409816 - | PfkB Patl_3658 4412102 - 4410804 - | major facilitator transporter Patl_3659 4414424 - 4412160 - | Poly(beta-D-mannuronate) lyase TERM 4198 4414557 - 4414514 - H 77 -8.3 -3.96148 | opp_overlap 4414520, overlap 4414516 4414520 CCGCCTTAGCACAAA TAGTAAGTGCGCTTTACAT GTGCGG ATGTAAAGCGCACTTTAAA AATGACAGCAGGGTC TERM 4199 4414555 - 4414516 - H 82 -10.9 -3.57406 | opp_overlap 4414520, overlap 4414514 4414520 GCCTTAGCACAAATA GTAAGTGCGCTTTACAT GTGCGG ATGTAAAGCGCACTTTA AAAATGACAGCAGGG TERM 4200 4414551 - 4414520 - H 100 -16.1 -3.51406 | opp_overlap 4414520, overlap 4414516 4414514 TAGCACAAATAGTAA GTGCGCTTTACAT GTGCGG ATGTAAAGCGCAC TTTAAAAATGACAGC TERM 4201 4414520 - 4414551 + H 100 -16.1 -3.57144 | opp_overlap 4414520 4414516 4414514 TAGCACAAATAGTAA GTGCGCTTTACAT GTGCGG ATGTAAAGCGCAC TTTAAAAATGACAGC Patl_3660 4414948 - 4415685 + | GntR-like TERM 4202 4415765 - 4415736 - T 100 -15.3 -3.08173 | opp_overlap 4415743, overlap 4415743 ATGAATTCCAGCCAA TAAAAAAGCCAAC ATAC GTTGGCTTTTTTA CATAAACGATAAGTC TERM 4203 4415743 - 4415758 + T 90 -9 -5.08824 | opp_overlap 4415736 4415743 CCAGCCAATAAAAAA GCCAAC ATAC GTTGGC TTTTTTACATAAACG TERM 4204 4415758 - 4415743 - T 95 -9 -5.4833 | opp_overlap 4415743, overlap 4415736 CCAGCCAATAAAAAA GCCAAC ATAC GTTGGC TTTTTTACATAAACG Patl_3661 4416529 - 4415783 - | short-chain dehydrogenase/reductase SDR TERM 4205 4416713 - 4416729 + r 73 -6.7 -4.26202 | TTGTTGTTTTTTTAG CTTTTTT GTT AAAAAAG TTTATTCGTCGCTAT Patl_3662 4418088 - 4416901 - | monooxygenase, FAD-binding TERM 4206 4417564 - 4417576 + g 81 -3.3 -5.4505 | ATGGATTTCGGATTG GGGCA ACA TGCAC TTTTTTATTGACGAG TERM 4207 4417729 - 4417742 + g 72 -8.1 -3.73968 | TATTATCTTTACGCC GCGCT CTAA AGCGC TTTGGTAAAGGATTT TERM 4208 4418056 - 4418015 - G 76 -8.1 -4.15006 | gap 1, overlap 4418016 ACATGTACGTCAAAA CCTTGGAGGTTTA-GCGCAA GTG CTGCGCTTAAACCGCCAATA CCGCCACCAGCGATA TERM 4209 4418223 - 4418256 + r 75 -10.5 -2.96531 | gap 1, opp_overlap 4418223 4418226 4418231 4418244, overlap 4418222 4418231 4418243 4418244 TTATCAGCATTAAGA GCAT-AAAACGCCGTA AAA TACCGCGTTTTAATGC GTTTCATCTTAATGC TERM 4210 4418256 - 4418223 - R 75 -10.5 -3.18023 | gap 1, opp_overlap 4418223 4418222 4418231 4418243 4418244, overlap 4418226 4418231 4418244 TTATCAGCATTAAGA GCAT-AAAACGCCGTA AAA TACCGCGTTTTAATGC GTTTCATCTTAATGC TERM 4211 4418252 - 4418226 - R 77 -11 -2.78495 | opp_overlap 4418223 4418222 4418231 4418243 4418244, overlap 4418223 4418231 4418244 TCAGCATTAAGAGCA TAAAACGCCGTA AAA TACCGCGTTTTA ATGCGTTTCATCTTA TERM 4212 4418231 - 4418247 + r 74 -6.5 -4.33165 | opp_overlap 4418226 4418223 4418231 4418244, overlap 4418223 4418222 4418243 4418244 ATTAAGAGCATAAAA CGCCGTA AAA TACCGCG TTTTAATGCGTTTCA TERM 4213 4418247 - 4418231 - R 77 -6.5 -4.55625 | opp_overlap 4418231 4418223 4418222 4418243 4418244, overlap 4418226 4418223 4418244 ATTAAGAGCATAAAA CGCCGTA AAA TACCGCG TTTTAATGCGTTTCA Patl_3663 4420452 - 4418284 - | hypothetical protein TERM 4214 4419300 - 4419290 - G 79 -2.4 -5.59357 | ATCACATCAAAAAAA CCGC CTT GAGG GTACAAGTCCACGGG Patl_3664 4421597 - 4420470 - | hypothetical protein TERM 4215 4421213 - 4421190 - G 71 -6.8 -4.07687 | gap 1, overlap 4421192 4421193 AGTGTCCGTGGAAAA TATTGCGCCAG AAC CTGGCAC-ATA TCGCCCTTTGTCAGC TERM 4216 4421211 - 4421193 - G 74 -11 -2.78032 | overlap 4421192 4421190 GTCCGTGGAAAATAT TGCGCCAG AAC CTGGCACA TATCGCCCTTTGTCA Patl_3665 4422779 - 4421790 - | Mg2+ transporter protein, CorA-like Patl_3666 4423032 - 4423937 + | alpha-L-glutamate ligase Patl_3667 4424009 - 4424458 + | hypothetical protein Patl_3668 4424721 - 4425263 + | hypothetical protein TERM 4217 4425293 - 4425255 - T 89 -10.4 -4.23758 | overlap 4425256 ATCGCATACGCAAAA TCATTCTGATGAGTAAAC AAC GTTAACTCATCAGATGGA AATGATAGATACGCC TERM 4218 4425291 - 4425256 - T 82 -11.4 -3.13773 | gap 1, overlap 4425255 TCGCATACGCAAAAT CATTCTGATGAGTAAAC AAC GTTAACTCATCAGA-TG GAAATGATAGATACG Patl_3669 4426230 - 4425328 - | diguanylate cyclase TERM 4219 4425741 - 4425751 + g 74 -5.4 -4.63218 | AGAAACTTCCACTGC GTTG GCT CAAC TTTTGTTGGCGCAAC TERM 4220 4426207 - 4426219 + g 72 -4.8 -4.64657 | GACTATTAATATTCG CGCT TTTTC AGCG TTTTTAAGCATTTGA Patl_3670 4426818 - 4427411 + | TetR family transcriptional regulator TERM 4221 4427657 - 4427633 - f 72 -9.3 -3.41936 | overlap 4427631 4427634 TACTAATGGCAAACA CTGTAGTGCGC AGG GTGCACTACAA AACACAAAGCGAACA TERM 4222 4427656 - 4427634 - f 76 -10.6 -2.64679 | overlap 4427633 4427631 ACTAATGGCAAACAC TGTAGTGCGC AGG GTGCACTACA AAACACAAAGCGAAC TERM 4223 4427687 - 4427666 - f 73 -5.9 -4.52142 | gap 1 ACTACAAAACACAAA GCGAAC-ACA AGT CGTCGTTCGC TCGAAATAGATAAAA TERM 4224 4428028 - 4428038 + G 71 -6.8 -4.09108 | GCAGTCGGCTTCGCT CTGC AAG GCAG TTTATCTAACTTCGC Patl_3671 4427713 - 4428546 + | MscS mechanosensitive ion channel TERM 4225 4428638 - 4428593 - T 100 -13.5 -4.16307 | opp_overlap 4428605, overlap 4428605 TGCTGAACAAAAACA GCACGTAAAAAAGGGTTACAC ATTT GTGTAACCCTTTTTTTTTTGC TAAATAAAAAGGCCG TERM 4226 4428605 - 4428626 + T 100 -13.1 -6.41805 | opp_overlap 4428593 4428605 ACAGCACGTAAAAAA GGGTTACAC ATTT GTGTAACCC TTTTTTTTTTGCTAA TERM 4227 4428626 - 4428605 - T 100 -13.1 -5.11613 | opp_overlap 4428605, overlap 4428593 ACAGCACGTAAAAAA GGGTTACAC ATTT GTGTAACCC TTTTTTTTTTGCTAA TERM 4228 4428683 - 4428649 - T 83 -5 -5.27335 | gap 1, overlap 4428650 TTTGCTAAATAAAAA GGCCGCTAACGCCCT AGAAAG AAGGCGT-AGCGACA ACACACAAAACTATT TERM 4229 4428682 - 4428650 - T 73 -8.5 -3.75678 | gap 1, overlap 4428649 TTGCTAAATAAAAAG GCCGCTAACGCCCT AGAAAG AAGGCGT-AGCGAC AACACACAAAACTAT Patl_3672 4429906 - 4428761 - | iron-containing alcohol dehydrogenase Patl_3673 4430094 - 4430984 + | AraC family transcriptional regulator Patl_3674 4432727 - 4430970 - | glycosyl transferase family protein TERM 4230 4432011 - 4431992 - G 74 -7.2 -4.2123 | gap 1, overlap 4431993 4431995 CATCTACCCAATAAA GC-ATGGGT AAG ACCCATAGC CCGATGCACCCTAAC Patl_3675 4433471 - 4432752 - | hypothetical protein Patl_3676 4434191 - 4433475 - | glycosyl transferase family protein TERM 4231 4434136 - 4434159 + g 83 -6.6 -5.0133 | opp_overlap 4434137, overlap 4434137 4434139 ATAATTTCATGGATA AGTGGCGCAA CATT TTGCGCCTCA TTTTTTGCAGGAATA TERM 4232 4434158 - 4434137 - G 73 -10.1 -3.36803 | opp_overlap 4434136 4434137 4434139 TAATTTCATGGATAA GTGGCGCAA CATT TTGCGCCTC ATTTTTTGCAGGAAT TERM 4233 4434137 - 4434158 + g 75 -10.1 -3.60316 | opp_overlap 4434137, overlap 4434136 4434139 TAATTTCATGGATAA GTGGCGCAA CATT TTGCGCCTC ATTTTTTGCAGGAAT TERM 4234 4434139 - 4434156 + g 79 -11.3 -3.37655 | opp_overlap 4434137, overlap 4434137 4434136 ATTTCATGGATAAGT GGCGCAA CATT TTGCGCC TCATTTTTTGCAGGA Patl_3677 4435308 - 4434361 - | response regulator receiver protein Patl_3678 4437838 - 4435550 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 4235 4436105 - 4436117 + g 74 -3.4 -5.0538 | ACCAACAGATACGGG TGCT TCTCC AGCA TTTTTTCCGCTGGCA Patl_3679 4438337 - 4437840 - | (2Fe-2S)-binding TERM 4236 4438604 - 4438619 + r 79 -9 -3.79668 | opp_overlap 4438604, overlap 4438591 AATGAGTGTAAAAAA GCCACT TTAA AGTGGC TTTAATCCATTCAAT TERM 4237 4438619 - 4438604 - R 90 -9 -5.07053 | opp_overlap 4438604 4438591 AATGAGTGTAAAAAA GCCACT TTAA AGTGGC TTTAATCCATTCAAT Patl_3680 4439499 - 4438651 - | putative glutathione S-transferase YghU TERM 4238 4439619 - 4439606 - R 74 -5.3 -4.67982 | opp_overlap 4439606 CCTTATGGAACAAAA GATGT AACA ACATC TGAATTTAGGGCATA TERM 4239 4439655 - 4439641 - R 100 -8.5 -5.626 | opp_overlap 4439641 TAGGGCATAAAAAAA CCCGC GAGAA GCGGG TTTAGAAGGACGATA TERM 4240 4439641 - 4439655 + r 72 -8.5 -3.53224 | opp_overlap 4439641 TAGGGCATAAAAAAA CCCGC GAGAA GCGGG TTTAGAAGGACGATA Patl_3681 4440453 - 4439677 - | SapC TERM 4241 4440073 - 4440061 - G 72 -4.7 -4.56597 | GCGGTTTTCTAAAAA CGGGC TCG GCTCG CCTTCAGCGGTGAAA TERM 4242 4440566 - 4440554 - R 90 -4.8 -5.65177 | opp_overlap 4440554 ACAGGTACAAAAAAA TGGC TCAAG GCCA TTATATATGCAGTCC TERM 4243 4440748 - 4440720 - R 72 -8.8 -3.53811 | overlap 4440723 TTTATCTTGCTGAAA CAAGGCGCCACA GATGA TGAAGCGCCTCG AATAAGCTTAAGCTA Patl_3682 4442396 - 4440756 - | FAD dependent oxidoreductase Patl_3683 4443889 - 4442429 - | SSS family solute/sodium (Na+) symporter Patl_3684 4444765 - 4444001 - | hypothetical protein Patl_3685 4446351 - 4444768 - | tryptophan halogenase TERM 4244 4446067 - 4446083 + g 72 -5.1 -4.65933 | opp_overlap 4446067, overlap 4446063 AAACCCAGCATGACA GCGAG CAAAAAC CTCGC TTTCTTTTAACCCTA TERM 4245 4446489 - 4446465 - R 80 -6.4 -4.80882 | opp_overlap 4446465 ATTTTATAGGAAAAA TGGCCCGC TTAATACTG GCGAGCCA TGATGTTGTTATCAG TERM 4246 4446506 - 4446537 + r 84 -10.2 -3.86822 | opp_overlap 4446506 4446509, overlap 4446509 GATGTTGTTATCAGA TAAGCGCATCACGT ATCC ACATGTTGCGCTTA TTTGTAACAAGCTTA TERM 4247 4446537 - 4446506 - R 83 -12.4 -2.78596 | opp_overlap 4446506 4446509, overlap 4446509 GATGTTGTTATCAGA TAAGCGCATCACGT ATCC ACATGTTGCGCTTA TTTGTAACAAGCTTA TERM 4248 4446534 - 4446509 - R 77 -9.7 -3.54475 | opp_overlap 4446506 4446509, overlap 4446506 GTTGTTATCAGATAA GCGCATCACGT ATCC ACATGTTGCGC TTATTTGTAACAAGC TERM 4249 4446509 - 4446534 + r 73 -7.5 -4.06419 | opp_overlap 4446509 4446506, overlap 4446506 GTTGTTATCAGATAA GCGCATCACGT ATCC ACATGTTGCGC TTATTTGTAACAAGC Patl_3686 4449309 - 4446550 - | TonB-dependent receptor Patl_3687 4449848 - 4452004 + | glycoside hydrolase, clan GH-D TERM 4250 4452020 - 4452046 + F 95 -12.2 -4.41087 | CGCATTAGATTTGTG CCGCGCTTGCTG ATT TGGCTAGCGCGG TTTCTGTTTCCTTCT TERM 4251 4452878 - 4452889 + G 74 -7.2 -4.25848 | opp_overlap 4452878 CCGTCGTAAATGGAA GGGC TTGA GCCC TTTTGGTAAAACCTT Patl_3688 4452315 - 4453514 + | membrane dipeptidase TERM 4252 4453567 - 4453530 - T 72 -9.3 -3.3785 | gap 1, opp_overlap 4453536, overlap 4453536 TTAACTTACGCATAA TAAAAAGCCCGTTTA-CG ACT CGCTGAACGGGCTTTGTA ATGAATTAGCTTTTA TERM 4253 4453561 - 4453536 - T 93 -8.3 -5.20333 | gap 1, opp_overlap 4453536, overlap 4453530 TACGCATAATAAAAA GCCCGTTTA-CG ACT CGCTGAACGGGC TTTGTAATGAATTAG TERM 4254 4453536 - 4453561 + T 86 -10.5 -3.99405 | gap 1, opp_overlap 4453536 4453530 TACGCATAATAAAAA GCCCGTTTA-CG ACT CGCTGAACGGGC TTTGTAATGAATTAG Patl_3689 4454910 - 4453618 - | platelet-activating factor acetylhydrolase, plasma/intracellular isoform II Patl_3690 4455675 - 4455022 - | 2OG-Fe(II) oxygenase Patl_3691 4456248 - 4455751 - | hypothetical protein Patl_3692 4457162 - 4456317 - | hypothetical protein Patl_3693 4457315 - 4459291 + | LppC putative lipoprotein Patl_3694 4459308 - 4459652 + | hypothetical protein Patl_3695 4459676 - 4460269 + | phosphoheptose isomerase Patl_3696 4460274 - 4460852 + | transport-associated TERM 4255 4461131 - 4461100 - T 100 -13.2 -3.82963 | opp_overlap 4461108, overlap 4461108 GTCGAACAATAAACA CAAAAAAAGGTGCC TTTT GGCACCTTTTTCTA ACGTGTAACACTTTA TERM 4256 4461108 - 4461123 + T 93 -10.4 -4.8667 | opp_overlap 4461100 4461108 ATAAACACAAAAAAA GGTGCC TTTT GGCACC TTTTTCTAACGTGTA TERM 4257 4461123 - 4461108 - T 100 -10.4 -5.90231 | opp_overlap 4461108, overlap 4461100 ATAAACACAAAAAAA GGTGCC TTTT GGCACC TTTTTCTAACGTGTA Patl_3697 4461569 - 4461144 - | stringent starvation protein B sspA 4462216 - 4461584 - | stringent starvation protein A TERM 4258 4461842 - 4461815 - G 83 -10.6 -3.68222 | opp_overlap 4461840 TGCCAAGCTCAACAA CGCTTCACGCAA TTCA TTACGTGCAGCG GCTACATCGCCTTTA TERM 4259 4462372 - 4462358 - R 85 -8.5 -4.33819 | ACCAGTGATAAGAAA GGGGC ACGGG GCCCC TTAAAATTTTGCGGA Patl_3699 4463144 - 4462410 - | cytochrome c1 Patl_3700 4464409 - 4463141 - | cytochrome b/b6-like TERM 4260 4463650 - 4463675 + g 82 -11.3 -3.65656 | opp_overlap 4463650 4463649 TATGCGGGAAGAAAG GTACGATATCA TCAA TGATGTCGTAC TTATCTGTGTAGTAC TERM 4261 4463717 - 4463734 + g 75 -2.7 -5.22039 | gap 1 AAATTTAGTTTTTTC GGCTT-CT GTG AGTGAGCC TTTTTTACGTTTAAC Patl_3701 4465043 - 4464411 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 4262 4464932 - 4464910 - G 72 -8.4 -3.80114 | CATGAACCGATGAAA GGTATAGCAG CAC CTGCGACACC GACACCACCCACAAC TERM 4263 4465280 - 4465264 - R 100 -10.8 -5.79526 | opp_overlap 4465264 ATAGGCCAAAAAAAA CCCGGC AAATA GCCGGG TTTCGAATTCATAAA TERM 4264 4465264 - 4465280 + r 83 -10.8 -3.67976 | opp_overlap 4465264 ATAGGCCAAAAAAAA CCCGGC AAATA GCCGGG TTTCGAATTCATAAA Patl_3702 4465693 - 4465301 - | ribosomal protein S9 rplM 4466134 - 4465706 - | 50S ribosomal protein L13 TERM 4265 4466433 - 4466386 - R 100 -14.4 -3.35798 | opp_overlap 4466387 4466389 4466393, overlap 4466367 4466387 ATTTGTCAGTGACAA CTGGCAATACGAGGAATTTACC ACAC AGCAAATTCCTCGTATTGCTAT TATAAAAAGCCTTGG TERM 4266 4466387 - 4466432 + r 100 -17.2 -3.29461 | opp_overlap 4466367 4466386 4466387, overlap 4466389 4466393 TTTGTCAGTGACAAC TGGCAATACGAGGAATTTAC CACACA GCAAATTCCTCGTATTGCTA TTATAAAAAGCCTTG TERM 4267 4466432 - 4466387 - R 100 -17.9 -2.61264 | opp_overlap 4466387 4466389 4466393, overlap 4466367 4466386 TTTGTCAGTGACAAC TGGCAATACGAGGAATTTACC ACAC AGCAAATTCCTCGTATTGCTA TTATAAAAAGCCTTG TERM 4268 4466389 - 4466430 + r 100 -17.6 -3.21395 | opp_overlap 4466367 4466387 4466386, overlap 4466387 4466393 TGTCAGTGACAACTG GCAATACGAGGAATTTAC CACACA GCAAATTCCTCGTATTGC TATTATAAAAAGCCT TERM 4269 4466393 - 4466426 + r 85 -11.2 -3.41745 | opp_overlap 4466367 4466387 4466386, overlap 4466389 4466387 AGTGACAACTGGCAA TACGAGGAATTTAC CACACA GCAAATTCCTCGTA TTGCTATTATAAAAA TERM 4270 4466464 - 4466442 - R 71 -4 -4.91109 | TTGCTATTATAAAAA GCCTTGGGCT CTT AACCGTAGGC TTTAAACAATGGCGC Patl_3704 4467040 - 4466453 - | signal transduction protein TERM 4271 4467053 - 4467084 + r 100 -16 -3.41636 | gap 1, overlap 4467054 CATGATTTTCTTCCT C-CCCCAGCATTGGG TAA CCTAATGCTGGGGTG TTAATTCAATTAATT TERM 4272 4467054 - 4467082 + r 100 -19.7 -3.27109 | overlap 4467053 ATGATTTTCTTCCTC CCCCAGCATTGGG TAA CCTAATGCTGGGG TGTTAATTCAATTAA Patl_3705 4467450 - 4467148 - | hypothetical protein Patl_3706 4468478 - 4467624 - | MazG family protein Patl_3707 4470640 - 4468478 - | (p)ppGpp synthetase I, SpoT/RelA TERM 4273 4470463 - 4470445 - G 72 -8.8 -3.50219 | opp_overlap 4470449 AATAGGGGTAGACAA GCGACGCT TGA AGCGTCTC ATCATCCATGTGTAA Patl_3708 4471296 - 4470916 - | holo-acyl-carrier-protein synthase Patl_3709 4472048 - 4471311 - | pyridoxal phosphate biosynthetic protein PdxJ Patl_3710 4472767 - 4472045 - | DNA repair protein RecO TERM 4274 4472252 - 4472232 - G 71 -6.9 -4.08939 | TAACAGCCAGACAAA CGTATGTCA CCT TGATATACG CAGCCGAGCTCAGGC Patl_3711 4473099 - 4472815 - | hypothetical protein Patl_3712 4474914 - 4473196 - | single-stranded-DNA-specific exonuclease RecJ TERM 4275 4473861 - 4473835 - G 83 -10.2 -3.72893 | opp_overlap 4473853, overlap 4473836 4473853 CACGCCTTGATGAAA GTCAGCTTGGTA CAA TACCAAGCCGAG GGGCATGTCTTGCTC TERM 4276 4473860 - 4473836 - G 84 -13.7 -2.83522 | opp_overlap 4473853, overlap 4473835 4473853 ACGCCTTGATGAAAG TCAGCTTGGTA CAA TACCAAGCCGA GGGGCATGTCTTGCT TERM 4277 4474327 - 4474313 - G 75 -10 -3.54459 | TCAATTTGGCGCAAA TGCGCT CTC AGCGCA AGCATCAAATAAAAT TERM 4278 4474986 - 4474967 - R 89 -10 -4.14056 | opp_overlap 4474970 ACGGTAAAGCAGAAA GCAGGAGC ATTT ACTCCTGC TTAACATACTATGAG Patl_3713 4475780 - 4474995 - | thiol:disulfide interchange protein DsbC Patl_3714 4476774 - 4475869 - | tyrosine recombinase XerD TERM 4279 4476556 - 4476539 - G 77 -9.1 -3.99347 | overlap 4476540 AAACTACTTAAACAA CGAGCGC TACT GCGCTCA GACAAACCATTGTCA TERM 4280 4476555 - 4476540 - G 73 -10.4 -2.98524 | overlap 4476539 AACTACTTAAACAAC GAGCGC TACT GCGCTC AGACAAACCATTGTC Patl_3715 4477075 - 4476764 - | Zn-ribbon like domain-containing protein Patl_3716 4478271 - 4477159 - | twitching motility protein Patl_3717 4479347 - 4478304 - | twitching motility protein TERM 4281 4479702 - 4479692 - g 71 -6.8 -4.08767 | TCGACCGCTTGAAAA TCGC CCA GCGA TTAAACGACCAACGT Patl_3718 4479376 - 4480059 + | hypothetical protein Patl_3719 4480196 - 4481017 + | pyrroline-5-carboxylate reductase Patl_3720 4481043 - 4481585 + | protein of unknown function YGGT Patl_3721 4481611 - 4482015 + | hypothetical protein TERM 4282 4482375 - 4482388 + G 70 -5.3 -4.49756 | TTACAGCGTGGGTTA CTTTC CCCT GAAAG TTTTGATATTTACGA Patl_3722 4482102 - 4483409 + | signal peptide prediction Patl_3723 4483430 - 4486141 + | periplasmic sensor hybrid histidine kinase TERM 4283 4486193 - 4486168 - T 77 -8.4 -3.91164 | gap 1, overlap 4486166 AAGGTGCGAAAAAGA GCCTGCTTATG CCACC CA-AAGCAGGC CAACAGATGATTACT Patl_3724 4487376 - 4486204 - | AraC family transcriptional regulator TERM 4284 4486473 - 4486486 + g 71 -3.8 -4.73682 | overlap 4486483 CTTGTTCGACTTTTA TGCC TCTGGC GGCA TTTTGTCTTATGAAG TERM 4285 4487492 - 4487502 + H 71 -6.8 -4.12225 | AAATTTCGTTATTAC CTGC ATT GCAG TTTAATTTAATCGTT TERM 4286 4487706 - 4487690 - g 72 -6.5 -4.25104 | GTGGTCGGAGCAAAA CCCACAA GAC TGGTGGG ACGGATTCTGCACTG TERM 4287 4488768 - 4488798 + G 72 -8.2 -3.78156 | opp_overlap 4488781 ATTACCTTGATTGGT GGTGGCGCCAAAAG TGC CTATTGGCGACAAC TTATTGCTGATGTTT TERM 4288 4488988 - 4489006 + G 71 -7.4 -3.85698 | AGTCTTATGCCCAAC GCCGAG CTACGTT CTCGGC TTTGTACAAGGCAAC Patl_3725 4487559 - 4489037 + | xylulokinase Patl_3726 4489191 - 4490510 + | xylose isomerase TERM 4289 4490573 - 4490523 - T 71 -9.9 -2.8838 | gap 3, opp_overlap 4490540 4490572, overlap 4490520 4490539 4490540 TAAAAAATCTAATGA CGGGTAGCTGAATCAAGGGCGTGG CCACTC CCACGCCTTTGACTC-GC--CCCG GAGCAATGCCCTGTT TERM 4290 4490559 - 4490540 - T 76 -10.7 -2.61274 | opp_overlap 4490540, overlap 4490539 4490523 4490520 GGTAGCTGAATCAAG GGCGTGG CCACTC CCACGCC TTTGACTCGCCCCGG TERM 4291 4490540 - 4490559 + T 83 -10.7 -3.64703 | opp_overlap 4490540 4490539 4490523 4490520 GGTAGCTGAATCAAG GGCGTGG CCACTC CCACGCC TTTGACTCGCCCCGG TERM 4292 4490604 - 4490625 + T 100 -11.7 -5.48825 | opp_overlap 4490606 TACACGCTCCCCTAA TAGCCTAAC CCCC GTTAGGCTA TTTTTTTGCCTGCTA TERM 4293 4490623 - 4490606 - T 72 -9.9 -3.01924 | opp_overlap 4490604 CACGCTCCCCTAATA GCCTAAC CCCC GTTAGGC TATTTTTTTGCCTGC TERM 4294 4491040 - 4491015 - T 100 -17.7 -4.38154 | opp_overlap 4491019, overlap 4491019 ATAGTTCGTATAAAA GAAAGCCGCTG TAGG CAGCGGCTTTC TTAAGCGTAAATCAG TERM 4295 4491019 - 4491036 + T 100 -12.7 -4.16842 | opp_overlap 4491015 4491019 TTCGTATAAAAGAAA GCCGCTG TAGG CAGCGGC TTTCTTAAGCGTAAA TERM 4296 4491036 - 4491019 - T 100 -12.7 -4.77173 | opp_overlap 4491019, overlap 4491015 TTCGTATAAAAGAAA GCCGCTG TAGG CAGCGGC TTTCTTAAGCGTAAA Patl_3727 4492462 - 4491062 - | sugar transporter TERM 4297 4492579 - 4492560 - R 100 -12.2 -4.90266 | GTTATTAAGTAAAAA GCCTGAAC ACAG GTTCAGGC AAAAATATCGTTATT Patl_3728 4493741 - 4492590 - | Alpha-L-arabinofuranosidase Patl_3729 4494604 - 4493876 - | NUDIX hydrolase TERM 4298 4493946 - 4493969 + g 73 -7.4 -4.16307 | gap 1, overlap 4493947 AATCGATATAGGCTG GCAGCGCGGTG CAT CAC-GCCCTGC TGTTTTTCTTCACAA TERM 4299 4493947 - 4493971 + g 80 -5.6 -5.07486 | overlap 4493946 ATCGATATAGGCTGG CAGCGCGGTG CATCA CGCCCTGCTG TTTTTCTTCACAATC TERM 4300 4494118 - 4494130 + g 84 -7.7 -4.87389 | opp_overlap 4494117 GGTTGAAGCCAACAG GTTCG TGG CGAAC TTTGTTTTTAAGATG TERM 4301 4494694 - 4494677 - H 77 -8.5 -3.89131 | opp_overlap 4494677 TTAACAATCAGTAAA CAAACAG CCCT CTGTTTG TTTTTTAGACAAAAA TERM 4302 4494677 - 4494694 + H 90 -8.5 -5.00616 | opp_overlap 4494677 TTAACAATCAGTAAA CAAACAG CCCT CTGTTTG TTTTTTAGACAAAAA TERM 4303 4495029 - 4495017 - g 74 -3.3 -5.06816 | ACCCTGCAAGAAAAA GTCGC CCA GCTAC AAACCGTGTGGCACG TERM 4304 4496176 - 4496152 - g 88 -5.5 -5.56372 | AAACCAAAATAAAAA GCGTGGCGGTC ATT GGCCCCCATGC TGATGAAACCTTATT TERM 4305 4497068 - 4497042 - g 74 -7.3 -4.323 | overlap 4497043 GTGAAAGAGCTAAAA GGCTTCAAGCG AGTAG CGCTTAAAGCA GGTGAGAGCAAGAAG TERM 4306 4497067 - 4497043 - g 74 -10.8 -3.18657 | overlap 4497042 TGAAAGAGCTAAAAG GCTTCAAGCG AGTAG CGCTTAAAGC AGGTGAGAGCAAGAA Patl_3730 4494867 - 4497284 + | glycoside hydrolase family protein TERM 4307 4497347 - 4497312 - T 95 -12 -4.18058 | opp_overlap 4497315 4497322, overlap 4497314 4497315 4497322 AAGTACACGCCAAAA CATGAAAAAACGGCCA TGAA TGGCCGTTTTTTCTTT TTGTATTCGCAAGCT TERM 4308 4497345 - 4497314 - T 100 -14.6 -3.68378 | opp_overlap 4497315 4497322, overlap 4497312 4497315 4497322 GTACACGCCAAAACA TGAAAAAACGGCCA TGAA TGGCCGTTTTTTCT TTTTGTATTCGCAAG TERM 4309 4497344 - 4497315 - T 100 -18.1 -2.80545 | opp_overlap 4497315 4497322, overlap 4497314 4497312 4497322 TACACGCCAAAACAT GAAAAAACGGCCA TGAA TGGCCGTTTTTTC TTTTTGTATTCGCAA TERM 4310 4497315 - 4497344 + T 100 -18.1 -5.0916 | opp_overlap 4497315 4497314 4497312 4497322, overlap 4497322 TACACGCCAAAACAT GAAAAAACGGCCA TGAA TGGCCGTTTTTTC TTTTTGTATTCGCAA TERM 4311 4497322 - 4497337 + T 100 -10.4 -5.98675 | opp_overlap 4497322 4497315 4497314 4497312, overlap 4497315 CAAAACATGAAAAAA CGGCCA TGAA TGGCCG TTTTTTCTTTTTGTA TERM 4312 4497337 - 4497322 - T 100 -10.4 -5.36314 | opp_overlap 4497315 4497322, overlap 4497315 4497314 4497312 CAAAACATGAAAAAA CGGCCA TGAA TGGCCG TTTTTTCTTTTTGTA Patl_3731 4498191 - 4497460 - | endonuclease/exonuclease/phosphatase TERM 4313 4497885 - 4497899 + g 86 -11.4 -3.65902 | opp_overlap 4497884 CCTCTTGAATATTAC GCGGCT GAA AGCCGC TTTGACTGACATCCA Patl_3732 4500359 - 4498197 - | phospholipase D TERM 4314 4498978 - 4498967 - G 70 -2.2 -4.9445 | gap 1 ATAACGAACTAAAAA CG-GG TTG CCACG CCTTGTTGGTGAATT TERM 4315 4500074 - 4500054 - G 88 -7.6 -5.00616 | gap 1 TCGTTGGCTAAAAAA CGCTAGGGA TGAG TCCC-AGCG CAGCAAATATATTTT TERM 4316 4500300 - 4500318 + g 71 -3.9 -4.81644 | gap 1 GGTAGCATGAGCCGC TTGACTGG TTTG CCAG-CAA TTTTCATTTTCTTTG Patl_3733 4500742 - 4500948 + | cold-shock DNA-binding domain-containing protein TERM 4317 4500979 - 4500997 + T 100 -16 -4.88293 | opp_overlap 4500969 4500979 AGTAATCGCCTAAGA CGAGCCGC ATA GCGGCTCG TTTCTTTTTAGGCTT TERM 4318 4500997 - 4500979 - T 100 -16 -3.04501 | opp_overlap 4500979, overlap 4500969 AGTAATCGCCTAAGA CGAGCCGC ATA GCGGCTCG TTTCTTTTTAGGCTT Patl_3734 4501555 - 4501061 - | redoxin TERM 4319 4501518 - 4501479 - G 72 -5 -4.58773 | gap 1, opp_overlap 4501480, overlap 4501480 4501482 4501483 TTCACTAAACGAAAA TCAGCCGCGCTTTCACCAA CAC TTGGT-AAAGCGCCGACGG TATTAAATGGATTGC TERM 4320 4501516 - 4501482 - G 71 -9.5 -3.22917 | opp_overlap 4501480, overlap 4501480 4501479 4501483 ACTAAACGAAAATCA GCC-GCGCTTTCACCAA CAC TTGGT-AAAGCGCCGAC GGTATTAAATGGATT TERM 4321 4501514 - 4501483 - G 73 -11 -2.52666 | gap 1, opp_overlap 4501480, overlap 4501482 4501480 4501479 CTAAACGAAAATCAG CCGCGCTTTCACCAA CAC TTGGT-AAAGCGCCG ACGGTATTAAATGGA Patl_3735 4502406 - 4501891 - | dihydrofolate reductase obgE 4503718 - 4502525 - | GTPase ObgE TERM 4322 4503235 - 4503198 - G 77 -7.2 -4.42653 | gap 1 ACGCTACGTATAAAA GTAGATTTACC-GGCAT TTGGC ATGCCCAGCAAACCTAC GTCAGCCAATAACAT TERM 4323 4503848 - 4503867 + r 74 -9.2 -3.60234 | opp_overlap 4503850, overlap 4503850 ACGTCTCAAACAAAA AACCCCGC ACAA GCGGGGTC TTTAAAACTGTGTAA TERM 4324 4503850 - 4503865 + r 86 -11.8 -3.37755 | opp_overlap 4503850, overlap 4503848 GTCTCAAACAAAAAA CCCCGC ACAA GCGGGG TCTTTAAAACTGTGT TERM 4325 4503865 - 4503850 - R 100 -11.8 -5.63517 | opp_overlap 4503850 4503848 GTCTCAAACAAAAAA CCCCGC ACAA GCGGGG TCTTTAAAACTGTGT rpmA 4504149 - 4503892 - | 50S ribosomal protein L27 Patl_3738 4504476 - 4504165 - | ribosomal protein L21 Patl_3739 4504716 - 4505687 + | trans-hexaprenyltranstransferase Patl_3740 4506714 - 4505749 - | hypothetical protein Patl_3741 4507269 - 4506736 - | hypothetical protein TERM 4326 4506932 - 4506946 + g 76 -4.2 -4.95155 | opp_overlap 4506932 4506931 4506940 ACTTCCCCTTCAAAT TGCACT AAC AGCGCA TTTTTCTGCTCTGCG Patl_3742 4507828 - 4507262 - | ECF subfamily RNA polymerase sigma-24 factor TERM 4327 4508251 - 4508238 - g 70 -2.3 -4.9218 | TATGCATGATAAAAA CGTCA ACAT TGGCG ATATATATCGCGTTG TERM 4328 4508573 - 4508563 - g 73 -2.4 -5.10208 | GAATGGCAACAAAAA CTGC TAC GCCG TATCGATAATCAATA Patl_3743 4507858 - 4508589 + | MOSC domain-containing protein TERM 4329 4508637 - 4508608 - T 100 -11.5 -5.64274 | gap 1, opp_overlap 4508608 GCAGGCATAAAAAAA CACCGCTTAG-TGC AAT GCAACTAGGCGGTG TTTTTAGTATCCAAA TERM 4330 4508608 - 4508637 + T 100 -13.7 -4.8048 | gap 1, opp_overlap 4508608 GCAGGCATAAAAAAA CACCGCTTAG-TGC AAT GCAACTAGGCGGTG TTTTTAGTATCCAAA rplI 4509115 - 4508663 - | 50S ribosomal protein L9 Patl_3745 4509369 - 4509142 - | ribosomal protein S18 TERM 4331 4509394 - 4509416 + r 87 -12.8 -3.31799 | opp_overlap 4509400 4509401, overlap 4509389 4509395 4509400 CCTTATTCTTGTTCG TCAGAAGCAG TAG CTGCTTCTGG TTCTGCAGACTTGTC TERM 4332 4509395 - 4509415 + r 93 -14.1 -2.58758 | opp_overlap 4509400 4509401, overlap 4509394 4509389 4509400 CTTATTCTTGTTCGT CAGAAGCAG TAG CTGCTTCTG GTTCTGCAGACTTGT Patl_3746 4509788 - 4509381 - | ribosomal protein S6 Patl_3747 4512347 - 4510002 - | aerobic respiration control sensor protein ArcB TERM 4333 4510924 - 4510936 + g 76 -9.1 -3.78775 | GCCAAACCTATCCCT GTGCC CGT GGCAC TTTGATGCTCAGGCA gltB 4512978 - 4517444 + | glutamate synthase subunit alpha TERM 4334 4518668 - 4518684 + G 79 -10.1 -3.76402 | CGTTTGGCTTTCAGC CTAGCCC TGC GGGCTGG TTTGGTGACTACGGT gltD 4517464 - 4518879 + | glutamate synthase subunit beta TERM 4335 4518938 - 4518913 - f 70 -9.1 -3.14647 | opp_overlap 4518919, overlap 4518919 ACGTATCACACTGAA TAAAAAGGAGC TTAG GCTCCTTTTTT TGTGGCTCTTTTTCG TERM 4336 4518932 - 4518919 - f 88 -8.1 -5.12068 | opp_overlap 4518919, overlap 4518913 CACACTGAATAAAAA GGAGC TTAG GCTCC TTTTTTTGTGGCTCT TERM 4337 4518919 - 4518932 + F 100 -8.1 -5.65177 | opp_overlap 4518919 4518913 CACACTGAATAAAAA GGAGC TTAG GCTCC TTTTTTTGTGGCTCT TERM 4338 4519848 - 4519869 + G 73 -8 -4.08394 | gap 1, overlap 4519842 AGCCGTTATGCTCGG GGCGAC-CC TTGCT GGTGTCGCC TTTTCAAACGCCTCT Patl_3750 4519114 - 4520280 + | iron-containing alcohol dehydrogenase TERM 4339 4520356 - 4520369 + T 80 -2.3 -5.56573 | opp_overlap 4520356, overlap 4520350 GTACCCAACAAAAAA GGAAC CTAG GCTCC TTTTTCTTTATTTCT TERM 4340 4520369 - 4520356 - T 86 -4.5 -5.4833 | opp_overlap 4520356 4520350 GTACCCAACAAAAAA GGAAC CTAG GCTCC TTTTTCTTTATTTCT Patl_3751 4521117 - 4520449 - | DSBA oxidoreductase TERM 4341 4520701 - 4520720 + g 75 -6.4 -4.44046 | opp_overlap 4520687 4520685, overlap 4520685 AGCGAGCAATTGCTC GTGGTTAC TTGG GTCACCAC TTTCTTTGAAGTACA TERM 4342 4521359 - 4521378 + H 71 -5.1 -4.64657 | overlap 4521361 AAAAAAAAATGCACT TTTCGTA AAAAAA TACGAAA TTTTTGACGATTTAA Patl_3752 4521533 - 4521823 + | chaperonin Cpn10 TERM 4343 4523274 - 4523258 - g 81 -12.3 -3.19642 | overlap 4523241 4523270 4523272 ATCAGTAGTGACTAA CGCCGTT AAA AACGGCG CTGACAACTACGGTT groEL 4521858 - 4523504 + | chaperonin GroEL TERM 4344 4523537 - 4523564 + F 90 -11.4 -3.81144 | opp_overlap 4523544, overlap 4523544 TCCGCTTTGAAATCT TAGGAAACCCGC TTCG GCGGGTTTTTTA TTGCTTGTTTTTTAT TERM 4345 4523544 - 4523557 + F 100 -9.5 -5.57396 | opp_overlap 4523544, overlap 4523537 TGAAATCTTAGGAAA CCCGC TTCG GCGGG TTTTTTATTGCTTGT TERM 4346 4523557 - 4523544 - f 79 -9.5 -3.7795 | opp_overlap 4523537 4523544 TGAAATCTTAGGAAA CCCGC TTCG GCGGG TTTTTTATTGCTTGT TERM 4347 4523715 - 4523703 - f 79 -10.5 -3.57792 | opp_overlap 4523695 TGACGTATTTTCAAA CCGCG TCC CGCGG CTCGAGTAACTCTTT TERM 4348 4523945 - 4523930 - f 86 -8.2 -4.98672 | CGCAAAAAGACAAAA GCAGCG ACTT CGCCGC CAATACATTCGCCTT TERM 4349 4524496 - 4524517 + G 71 -10.3 -2.67289 | opp_overlap 4524500, overlap 4524495 4524500 AGGAATATTGGTTCA TAAAGCGAA AGAA TTCGCTTTA CTTGCTGTTTCCACT Patl_3755 4524185 - 4525468 + | hypothetical protein Patl_3756 4526447 - 4525491 - | transposase IS116/IS110/IS902 Patl_3757 4527152 - 4527340 + | hypothetical protein TERM 4350 4527725 - 4527748 + F 93 -10.4 -4.98522 | CTGTTTGCATTCTGC TCAGTGGTTA ACCT TGACCACTGA TTTTTATATGCACTT TERM 4351 4528138 - 4528162 + F 74 -5.1 -4.66163 | TTTCATATGTTAAGG CGCTTTCAA AAAAAAA TTGAAAGTG TTTTTGGCTGGGGCT Patl_3759 4528253 - 4529266 + | zinc-binding alcohol dehydrogenase Patl_3760 4529366 - 4530841 + | betaine-aldehyde dehydrogenase Patl_3761 4530893 - 4531510 + | antibiotic biosynthesis monooxygenase Patl_3762 4531557 - 4532375 + | acetolactate decarboxylase Patl_3763 4532443 - 4533573 + | zinc-binding alcohol dehydrogenase TERM 4352 4534002 - 4533980 - f 77 -8.4 -3.93556 | AGGCATTCAAGCAAA GCACGCGAAG AAA CTTCGTATGC AGTTAGCTGCTGTCC Patl_3764 4533999 - 4534184 + | plasmid maintenance system killer Patl_3765 4534184 - 4534477 + | XRE family plasmid maintenance system antidote protein TERM 4353 4534681 - 4534711 + T 90 -12.7 -3.5774 | opp_overlap 4534684 4534688, overlap 4534684 AAGCGTCTAGATGTA TAAGGAACCCTTC ATTTC GGAGGGTTCCTTG TTTACAAGATTACAT TERM 4354 4534684 - 4534708 + T 91 -12.2 -3.9243 | opp_overlap 4534684 4534688, overlap 4534681 CGTCTAGATGTATAA GGAACCCTTC ATTTC GGAGGGTTCC TTGTTTACAAGATTA TERM 4355 4534708 - 4534684 - T 80 -10.7 -3.39327 | opp_overlap 4534684 4534681, overlap 4534688 CGTCTAGATGTATAA GGAACCCTTCA TTT CGGAGGGTTCC TTGTTTACAAGATTA TERM 4356 4534782 - 4534806 + T 83 -9.3 -4.13767 | GATGGTGTGCTGGGG CTTGTGGGGTT CTA AACGCCGCAAG TTTTAAGCTGCGCAG TERM 4357 4534870 - 4534885 + T 77 -6.1 -4.63048 | opp_overlap 4534868 CTAGATGCAAAAGCC CCCTC ATTTCG GAGGG TTTCTTGTTTATACG TERM 4358 4535019 - 4535009 - T 81 -6.8 -4.78848 | opp_overlap 4535018, overlap 4535010 4535012 GCGTGAAATACAAAA GCAG CTA CTGC GTAGCTAAAGCATGC Patl_3766 4536000 - 4535353 - | hypothetical protein Patl_3767 4536514 - 4536005 - | hypothetical protein TERM 4359 4536438 - 4536455 + g 70 -9.8 -3.11634 | AAGTTATCGATAGTC GGCCCC ATAAAA GGGGCC TTAAGTAGTGTGAAA Patl_3768 4537367 - 4536615 - | hypothetical protein TERM 4360 4537777 - 4537792 + r 77 -6.1 -4.63048 | overlap 4537763 ATGCGGCATGATGCC CCCTC ATTTCG GAGGG TTTCTTGTTTATAGG Patl_3769 4540112 - 4537842 - | transcriptional regulator, CadC TERM 4361 4538012 - 4538028 + g 70 -2.2 -5.0538 | GATATTGGTCATTTA TGCCGT AAATA ACGTCA TTTTTTACGATGAAG TERM 4362 4538292 - 4538320 + g 95 -12.5 -4.30987 | opp_overlap 4538292 GTCCCAGTGGAATAA GCTTTTCACTGGG TAA CTCAGTGAAATGC TTTCTTCTGCGCCGT TERM 4363 4538320 - 4538292 - G 79 -10.3 -3.65046 | opp_overlap 4538292 GTCCCAGTGGAATAA GCTTTTCACTGGG TAA CTCAGTGAAATGC TTTCTTCTGCGCCGT Patl_3770 4540393 - 4541679 + | beta-lactamase Patl_3771 4542488 - 4541892 - | TetR family transcriptional regulator TERM 4364 4542217 - 4542230 + g 79 -4.5 -5.1104 | opp_overlap 4542207 AATAACGAGACCATG GCATG AACC CGTGC TTTTTCTCTCTCTTT Patl_3772 4543345 - 4542488 - | phytanoyl-CoA dioxygenase TERM 4365 4543048 - 4543059 + g 74 -5.8 -4.63218 | GATCAACCAAGCGGT CCAG TGCT CTGG TTTTGTTCAGAACGC TERM 4366 4543748 - 4543806 + H 80 -10.1 -3.61902 | opp_overlap 4543748, overlap 4543731 TTTGTCAGTTGCAAA TGCTTATCGTTATAATATAACATAG CCACCTTTA TTATGTTATATTATAACGATACGGA TTCTGTGTGATAGAA TERM 4367 4543806 - 4543748 - H 79 -10 -3.57144 | opp_overlap 4543731 4543748 TTTGTCAGTTGCAAA TGCTTATCGTTATAATATAACATAGCCA CCT TTATTATGTTATATTATAACGATACGGA TTCTGTGTGATAGAA TERM 4368 4544275 - 4544258 - g 75 -2.6 -5.26316 | opp_overlap 4544259, overlap 4544259 GCATGCGACAAAAAA CGGCCA TCGCGC TGGCCT TGCTGCGTGAAGCCC Patl_3773 4543813 - 4544550 + | ABC transporter related TERM 4369 4544919 - 4544903 - g 70 -5.1 -4.45485 | AGGACACCGACAAAA CAGCG CCATGTT CGCTG ACCAAAAACAGGGCA TERM 4370 4545300 - 4545284 - g 85 -7.3 -5.00616 | opp_overlap 4545284 CGCGCTTTCAAAAAA CAGTGAA AGC TTCACCG CTTTAGCGCTCACTT TERM 4371 4545431 - 4545397 - g 74 -7.2 -4.22407 | overlap 4545393 CAGGAAAACTAGAAA CAGATTTCGCTGTT ATCGCCG AACTGCGAAAACTG GGTGATGGTCACAAT TERM 4372 4545582 - 4545567 - g 70 -4.8 -4.51777 | ACATCAGAAGCAAAA TTAACA GAGG TGTTAA ACGAGTTTGCCGAGC Patl_3774 4544568 - 4546010 + | hypothetical protein Patl_3775 4546007 - 4547317 + | hypothetical protein Patl_3776 4547345 - 4549468 + | TonB-dependent siderophore receptor TERM 4373 4549565 - 4549590 + T 100 -16.9 -5.20534 | opp_overlap 4549565 AATGCCTAAAAAAAA GCCCGCAGATC CAAA GGTCTGCGGGC TTTTTGTTGCTTGAT TERM 4374 4549590 - 4549565 - T 100 -15.5 -5.77853 | gap 1, opp_overlap 4549565 AATGCCTAAAAAAAA GCCCGCAGATCC AAA GG-TCTGCGGGC TTTTTGTTGCTTGAT Patl_3777 4550882 - 4549620 - | peptidase M24 TERM 4375 4549972 - 4549988 + g 71 -3.6 -4.81083 | opp_overlap 4549972 TGGGCGGCATTAAAG GCAGCA AGTTG TGCGGC TTTTTCATCGTTCCA TERM 4376 4550192 - 4550213 + g 84 -8.7 -4.65895 | AAAAATAATTGCCCT GCGCACCGA CCTT TTGGTGTGC TTTTTCAATGAAGGC TERM 4377 4550388 - 4550399 + g 74 -7.2 -4.25056 | overlap 4550381 ATTGATGAGGGTTAA GCCC GTTT GGGC TTTATTGATGCCGTC Patl_3778 4552115 - 4551126 - | AraC family transcriptional regulator TERM 4378 4552411 - 4552432 + G 73 -2.3 -5.14563 | gap 1, overlap 4552411 4552412 CACAATGATGAAGTT G-GTGCGTTT TGA AAACGGACGC TTTTTTGATAACGCG Patl_3779 4552259 - 4554175 + | beta-ketoacyl synthase TERM 4379 4554239 - 4554199 - f 91 -13.5 -2.58236 | opp_overlap 4554210, overlap 4554210 GAAAGTCATAGCAAG CACAGAAAAAATCCGGCTA ATT TAGCCGGATTTTTTATGAA AATGCTTAATATGAA TERM 4380 4554228 - 4554210 - f 100 -13.2 -5.42131 | opp_overlap 4554210, overlap 4554199 CAAGCACAGAAAAAA TCCGGCTA ATT TAGCCGGA TTTTTTATGAAAATG TERM 4381 4554210 - 4554228 + F 100 -13.2 -5.252 | opp_overlap 4554210 4554199 CAAGCACAGAAAAAA TCCGGCTA ATT TAGCCGGA TTTTTTATGAAAATG TERM 4382 4554859 - 4554846 - g 73 -2.3 -5.1166 | CAGCAAAAGTAAAAA TGCGC CCAT GCGAA AAAGAGTGAATGCCA Patl_3780 4554397 - 4555062 + | lipolytic enzyme, G-D-S-L TERM 4383 4555274 - 4555258 - f 73 -8.7 -3.72695 | ATTTTGGCCATTAAA CCTCGGT GAG ACCGAAG ATAACACTGTGTTTC TERM 4384 4555536 - 4555550 + F 72 -3.6 -5.05079 | CGACTTGTTCGGGCT GATGAT TTT ATTATC TTTTTATCTACTTGT Patl_3781 4555764 - 4556369 + | hypothetical protein Patl_3782 4556797 - 4556525 - | hypothetical protein Patl_3783 4558086 - 4556839 - | acyl-CoA dehydrogenase-like Patl_3784 4558711 - 4558920 + | cold-shock DNA-binding domain-containing protein Patl_3785 4559193 - 4561439 + | ribonuclease R Patl_3786 4562192 - 4561557 - | putative integral membrane protein Patl_3787 4562735 - 4562262 - | hypothetical protein Patl_3788 4563035 - 4562781 - | hypothetical protein Patl_3789 4563405 - 4563908 + | putative lipoprotein Patl_3790 4564027 - 4564464 + | hypothetical protein Patl_3791 4564671 - 4566182 + | Acetyl-CoA hydrolase Patl_3792 4566275 - 4566601 + | hypothetical protein dgt 4568153 - 4566705 - | deoxyguanosinetriphosphate triphosphohydrolase Patl_3794 4569122 - 4568310 - | hypothetical protein TERM 4385 4569645 - 4569633 - H 78 -2.7 -5.37345 | GTTAACCAGAAAAAA TGTTC ACC AAACA TGGATAAAATCGACG TERM 4386 4570174 - 4570159 - g 85 -6.8 -5.00884 | overlap 4570161 ACTGTTTGGAAAAAA TACGCC TTCA GGCGCA ATACTGATCCGTTCT TERM 4387 4570172 - 4570161 - g 71 -7.2 -4.13561 | overlap 4570159 TGTTTGGAAAAAATA CGCC TTCA GGCG CAATACTGATCCGTT Patl_3795 4569680 - 4572322 + | TonB-dependent receptor TERM 4388 4572357 - 4572329 - T 74 -8.9 -3.50853 | opp_overlap 4572335 4572336 4572338 CGCTTTTAAGGACAA TACCTAATACCGT TCC ACGGTAATTGGTA TAAGCAAAGAAACCG TERM 4389 4572366 - 4572387 + T 91 -10.9 -4.63218 | opp_overlap 4572366 4572370, overlap 4572370 ATTGGTATAAGCAAA GAAACCGGT ACAT GCCGGTTTC TTTTATTGCCAACGA TERM 4390 4572387 - 4572366 - T 86 -10.2 -3.99678 | opp_overlap 4572366 4572370, overlap 4572370 ATTGGTATAAGCAAA GAAACCGG TACATG CCGGTTTC TTTTATTGCCAACGA TERM 4391 4572383 - 4572370 - T 71 -5.2 -4.59982 | opp_overlap 4572366 4572370, overlap 4572366 GTATAAGCAAAGAAA CCGG TACATG CCGG TTTCTTTTATTGCCA TERM 4392 4572370 - 4572383 + T 79 -5.9 -4.87892 | opp_overlap 4572370 4572366, overlap 4572366 GTATAAGCAAAGAAA CCGGT ACAT GCCGG TTTCTTTTATTGCCA Patl_3796 4575512 - 4572390 - | tetratricopeptide TPR_2 TERM 4393 4572720 - 4572730 + g 79 -8.2 -4.2231 | opp_overlap 4572719, overlap 4572719 GTTTTCCCCCAACAC GCGG ATC CCGC TTTTCAGTGCTAATT TERM 4394 4573461 - 4573472 + g 70 -2.2 -5.04385 | AGTGACTTCTGGGTG TGCG TTGC CGTA TTTTTTAAGCGTGTG Patl_3797 4577534 - 4575912 - | diguanylate cyclase/phosphodiesterase TERM 4395 4577613 - 4577592 - R 75 -10.1 -3.09193 | opp_overlap 4577593, overlap 4577595 ATTAGATTCACCGAA TGACGCGCT TATT AGCGCGTCT TATATCAGAATAATG TERM 4396 4577593 - 4577612 + r 95 -13.6 -3.49653 | opp_overlap 4577592 4577595 TTAGATTCACCGAAT GACGCGCT TATT AGCGCGTC TTATATCAGAATAAT TERM 4397 4577610 - 4577595 - R 73 -10.4 -2.75891 | opp_overlap 4577593, overlap 4577592 AGATTCACCGAATGA CGCGCT TATT AGCGCG TCTTATATCAGAATA Patl_3798 4579178 - 4577790 - | RND efflux system outer membrane lipoprotein Patl_3799 4582413 - 4579252 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 4398 4579452 - 4579440 - G 71 -7.7 -3.86916 | CAGCACCAGATGAAA TTGCC AAC GGCAA AATACCAAACATAAA TERM 4399 4582423 - 4582403 - G 78 -6.2 -4.67607 | opp_overlap 4582403 CGGTCAATAAAGAAA CGTGCAAA CATGT TTTACACG CCCCCTTTTATAGCA Patl_3800 4583631 - 4582417 - | RND family efflux transporter MFP subunit TERM 4400 4583253 - 4583271 + g 86 -11 -3.66356 | opp_overlap 4583253 CTTCAAATTTCAAAA GGTCAGCG AAA CGCTGATC TTTGAGCTTGGCGGT TERM 4401 4583271 - 4583253 - G 83 -8.8 -4.24002 | opp_overlap 4583253 CTTCAAATTTCAAAA GGTCAGCG AAA CGCTGATC TTTGAGCTTGGCGGT TERM 4402 4583542 - 4583558 + g 76 -7.9 -4.24413 | overlap 4583538 AACTTCAGTGACACG CCCAGCC TGA GGCTGAG TTGTTTCTTGCTGGC Patl_3801 4585702 - 4584113 - | PepSY-associated membrane protein TERM 4403 4584524 - 4584546 + g 75 -2.6 -5.10767 | overlap 4584526 4584527 ATTGAGCCGCTCGAC GATGGCATGC CCA GCATGACGTG TTTTTATCTTGGCTA TERM 4404 4585154 - 4585136 - G 76 -7.4 -4.2231 | overlap 4585150 AATCATGATGCAAAA GGGTATTG TGA CAATCCCC GCAAGAGCGTGAAAA Patl_3802 4585980 - 4585699 - | hypothetical protein TERM 4405 4585952 - 4585919 - G 78 -11.7 -3.08966 | opp_overlap 4585927, overlap 4585909 4585923 CTAAAGGCCACTGAA GCAAGGTAGCCGCCA ATAA TGGCGACTATCATGC GAAGTGACACATCCA TERM 4406 4585948 - 4585923 - G 73 -9.7 -3.37522 | opp_overlap 4585927, overlap 4585919 4585909 AGGCCACTGAAGCAA GGTAGCCGCCA ATAA TGGCGACTATC ATGCGAAGTGACACA Patl_3803 4588426 - 4586003 - | TonB-dependent receptor, plug Patl_3804 4589194 - 4588568 - | hypothetical protein Patl_3805 4591127 - 4589280 - | hypothetical protein TERM 4407 4589950 - 4589963 + g 77 -3.8 -5.1101 | AATACTTCAGTATGT GTGC TCCACT GCAC TTTTTTGGCTGGTAA TERM 4408 4591139 - 4591121 - G 82 -11 -3.57144 | overlap 4591136 TGGGGCACTTTGAAA CGGGCATC TAG GATACCCG TTAACGAGGATGAAT Patl_3806 4591690 - 4591160 - | hypothetical protein TERM 4409 4591593 - 4591582 - G 74 -5.8 -4.72497 | TAGTTAGTAATAAAA GTGC TGCG GCAC CAATAATTTTTTTCA Patl_3807 4592907 - 4591867 - | phage integrase Patl_3808 4593903 - 4592926 - | hypothetical protein TERM 4410 4594228 - 4594246 + r 73 -6.7 -4.1413 | overlap 4594198 AAAAACCAACTTGGC GCGCTGA CTTGT TCAGTGC TTTTCCCGCTATATT Patl_3809 4595130 - 4594309 - | FAD dependent oxidoreductase Patl_3810 4596564 - 4595584 - | alpha/beta hydrolase fold TERM 4411 4595716 - 4595739 + g 95 -13.2 -3.76413 | CCCCTGTTTTTGATA GGCGTTTAGC AATC GCTGAACGCC TTTGCCCTTTTCACC Patl_3811 4598318 - 4596675 - | AMP-dependent synthetase and ligase TERM 4412 4597295 - 4597285 - G 71 -6.8 -4.11216 | overlap 4597289 TCTTCATGGCTAAAA GGCA TAT TGCC GCTGGCAAGACCTGT TERM 4413 4597459 - 4597475 + g 79 -9.5 -3.67737 | opp_overlap 4597458 TTACTGGCGACCAAT TTGCCAA TAA TTGGCAA TTTAAGCATTTTATC Patl_3812 4599179 - 4598397 - | enoyl-CoA hydratase/isomerase Patl_3813 4600034 - 4599438 - | putative transcriptional regulator Patl_3814 4603918 - 4600037 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 4414 4601102 - 4601118 + g 72 -9.4 -3.5944 | opp_overlap 4601101 4601100 TAACTCTTGATAACC TCGGCG ATTAG CGCCGA TTTGAGCCTGTAAGT Patl_3815 4604136 - 4605362 + | natural resistance-associated macrophage protein TERM 4415 4605406 - 4605418 + T 93 -10.5 -5.02074 | opp_overlap 4605406 ACGTGCACAAAAAAA GGCGC TAA GCGCC TTTTTTAAAAACTAA TERM 4416 4605418 - 4605406 - T 100 -10.5 -5.61596 | opp_overlap 4605406 ACGTGCACAAAAAAA GGCGC TAA GCGCC TTTTTTAAAAACTAA Patl_3816 4605896 - 4605450 - | hypothetical protein Patl_3817 4607442 - 4605949 - | tryptophan halogenase TERM 4417 4607605 - 4607577 - R 100 -9.6 -5.28176 | gap 1 CTGACGCATAAAAAA GGCCCCAACAGTT AGCA AACTGA-GGGGCC GAGTAGCAGTGTTTT Patl_3818 4610547 - 4607623 - | TonB-dependent receptor Patl_3819 4612030 - 4610753 - | major facilitator transporter Patl_3820 4612317 - 4614254 + | alpha amylase, catalytic region Patl_3821 4615254 - 4614280 - | LacI family transcription regulator TERM 4418 4616109 - 4616119 + G 74 -8.2 -3.90097 | GGCATTTCGTCTATT GCGG TAC CCGC TTATATTTCTGAAAT Patl_3822 4615767 - 4617098 + | sugar transporter Patl_3823 4617095 - 4618690 + | levanase TERM 4419 4619036 - 4619026 - g 76 -8.2 -4.18762 | AATTTTTAGCCAAAA GCCC CAT GGGC AAAGTCCCTGCGCTA TERM 4420 4619509 - 4619494 - g 86 -9 -4.42788 | CCGAAGTGCAGAAAA TTGCGG CAGA CCGCAA AGTCGCAAATAAAGC Patl_3824 4618884 - 4619558 + | glutathione S-transferase-like TERM 4421 4619575 - 4619594 + F 79 -9.4 -3.63627 | opp_overlap 4619571 4619570 4619579 GCGTGATAAACGGTA GGAAGATT ACCC AATCTTCC TTTACCATATAAGGC Patl_3825 4619628 - 4619822 + | Zn-ribbon protein Patl_3826 4619849 - 4620205 + | hypothetical protein TERM 4422 4620248 - 4620232 - f 77 -8 -4.18018 | opp_overlap 4620232, overlap 4620245 CGCGCGCACGTAAAA GCGGTT TAGCC AACCGC TTTGTGGCTAGGCAT TERM 4423 4620232 - 4620248 + F 73 -8 -3.92075 | opp_overlap 4620232 4620245 CGCGCGCACGTAAAA GCGGTT TAGCC AACCGC TTTGTGGCTAGGCAT TERM 4424 4620980 - 4620996 + G 73 -10.1 -3.35046 | overlap 4620979 ATCTGTGTTGATGGC GAGCGTG ATA CGCGCTC TGTTTCCAAAAATCG Patl_3827 4620288 - 4621217 + | hypothetical protein Patl_3828 4621353 - 4622021 + | hypothetical protein TERM 4425 4622071 - 4622054 - T 89 -5.5 -5.47399 | opp_overlap 4622044 4622054 TCAAGCGTAAAAAAA CCGCC GATTGACT GGCGG TTTTTTTTGTTCAGT TERM 4426 4622054 - 4622071 + T 100 -6.2 -6.11243 | opp_overlap 4622054, overlap 4622044 TCAAGCGTAAAAAAA CCGCCG ATTGAC TGGCGG TTTTTTTTGTTCAGT TERM 4427 4622081 - 4622093 + T 71 -4.1 -4.84359 | TGGCGGTTTTTTTTG TTCAG TGA CTGGA TTTTTCTAGAGCTGC Patl_3829 4623496 - 4622099 - | PhoH-like protein TERM 4428 4622482 - 4622502 + g 83 -4.6 -5.27779 | CTAAAGAGTCCGTAA TGGCCGCT AACCA GGGGGCCA TTTTTTCCTCTTCCG TERM 4429 4623471 - 4623481 + g 95 -3.2 -5.94713 | AGTACGTAAATTCTT GTGT CTA ACGC TTTTTTTTCTGGCAT TERM 4430 4624516 - 4624533 + G 70 -4.7 -4.43272 | TTGGTCGAGATGCTG CGCCGGG TGAA CCTCGCG TTTTCCATTTTCGAT Patl_3830 4623847 - 4626678 + | ATP-dependent helicase HepA Patl_3831 4626693 - 4627349 + | pseudouridylate synthase TERM 4431 4627844 - 4627813 - g 75 -3 -5.1675 | gap 1, overlap 4627817 TGACCGATGAAAAAA CGACCGCACCAGATT CTC AATCTCAAGCG-TCG ACGACTGACGAATCG Patl_3832 4627419 - 4628399 + | hypothetical protein Patl_3833 4628554 - 4628886 + | hypothetical protein TERM 4432 4628876 - 4628907 + T 84 -10.2 -3.84284 | overlap 4628881 ATGAATATTTAGGCT CACGACCTTAACGG ATTA TCGTTATGGTTGTG TTTCCTCGCTTTTAA Patl_3834 4630150 - 4628897 - | major facilitator transporter TERM 4433 4629010 - 4628996 - G 86 -4.2 -5.62045 | overlap 4628997 ACAGATAATAAAAAA CTGGGT GTA ACCCAC CGCTTCGATAACATA TERM 4434 4629009 - 4628997 - G 71 -7.7 -3.94787 | overlap 4628996 CAGATAATAAAAAAC TGGGT GTA ACCCA CCGCTTCGATAACAT TERM 4435 4629805 - 4629795 - G 76 -4.6 -5.00616 | CTGGCGCTGAAAAAA GCGA TAG CCGC GACAATCACTATAAT Patl_3835 4631147 - 4630197 - | diguanylate cyclase TERM 4436 4630928 - 4630904 - G 77 -3.5 -5.24796 | CCCAGATAACAAAAA CCGGGCTTTTC ATG GAAAAAACAGG TTCGACCTTGGCCCT Patl_3836 4632175 - 4631159 - | response regulator receiver protein thyA 4632419 - 4633270 + | thymidylate synthase Patl_3838 4633398 - 4634276 + | drug/metabolite exporter family protein TERM 4437 4634311 - 4634284 - T 93 -9.8 -4.8622 | opp_overlap 4634284 TCGCCTAACGAAAAA GCCGGTAGGGAA TAAA TTCCAAACCGGC TTTTATCAACATTAG TERM 4438 4634284 - 4634311 + T 90 -9.8 -4.4017 | opp_overlap 4634284 TCGCCTAACGAAAAA GCCGGTAGGGAA TAAA TTCCAAACCGGC TTTTATCAACATTAG Patl_3839 4635638 - 4634346 - | membrane protein involved in aromatic hydrocarbon degradation TERM 4439 4634575 - 4634559 - G 73 -9.5 -3.42241 | opp_overlap 4634556, overlap 4634562 AATAGAGATCGACAA CAACTGA GAG TCAGTTG GGGTTTCATCGTAAG TERM 4440 4635949 - 4635938 - R 70 -3.6 -4.8622 | overlap 4635941 TTGGGTAAGCAAAAA GACG CCAA CGCC CAGCGTAAACAAATA Patl_3840 4636576 - 4635914 - | abortive infection protein TERM 4441 4636691 - 4636712 + H 90 -8.8 -4.91712 | GGGCAGTTCACTTTT TAGCGCAA TATTTT TTGCGCTA TTTTTCTGCATTGCC TERM 4442 4637270 - 4637260 - g 72 -5.4 -4.48741 | GAATTCATGAGAAAA CATC TTG GATG TTACGCGCGACTCGT Patl_3841 4636821 - 4637291 + | Ferritin and Dps TERM 4443 4637364 - 4637335 - T 84 -12.3 -3.0894 | opp_overlap 4637335 4637341, overlap 4637341 CAATCACGCATTTAA TAGAAAGGGCTAG GTTA CTAGCCCTTTTTA TTGTCAGCTTGATTG TERM 4444 4637335 - 4637364 + T 100 -14.5 -3.38178 | opp_overlap 4637335 4637341, overlap 4637341 CAATCACGCATTTAA TAGAAAGGGCTAG GTTA CTAGCCCTTTTTA TTGTCAGCTTGATTG TERM 4445 4637358 - 4637341 - T 93 -11.3 -4.21607 | opp_overlap 4637335 4637341, overlap 4637335 CGCATTTAATAGAAA GGGCTAG GTTA CTAGCCC TTTTTATTGTCAGCT TERM 4446 4637341 - 4637358 + T 100 -11.3 -5.19328 | opp_overlap 4637341 4637335, overlap 4637335 CGCATTTAATAGAAA GGGCTAG GTTA CTAGCCC TTTTTATTGTCAGCT Patl_3842 4638163 - 4637381 - | short-chain dehydrogenase/reductase SDR TERM 4447 4638310 - 4638288 - R 93 -11.3 -4.17048 | CTGTGGCCAAAAGAA CTGGCTCAC AGAGA GCGAGCCAG TAAATAGAAATAATT Patl_3843 4639166 - 4638324 - | prolipoprotein diacylglyceryl transferase Patl_3844 4639976 - 4639176 - | hypothetical protein Patl_3845 4642279 - 4639991 - | phosphoenolpyruvate-protein phosphotransferase PtsP TERM 4448 4640127 - 4640137 + g 73 -2.4 -5.10933 | opp_overlap 4640121 TTCAAATTAGCGCTG CGGG CAA CCCA TTTTATTTTGAGTAA TERM 4449 4642123 - 4642139 + g 72 -6.5 -4.35742 | overlap 4642127 GGCCTTCTGTGGCTC GCAGCGT AAA GTGCTGC TTTTCGTAGTTGGCT Patl_3846 4642813 - 4642289 - | dinucleoside polyphosphate hydrolase Patl_3847 4642873 - 4643523 + | YhhN-like Patl_3848 4643516 - 4644202 + | DNA mismatch repair protein TERM 4450 4644254 - 4644239 - T 93 -10.4 -4.7497 | opp_overlap 4644239 TTCAGGTACGAAAAA GGCGTC GAAA GACGCC TTTATAATTCGTAAT TERM 4451 4644239 - 4644254 + T 86 -10.4 -4.08546 | opp_overlap 4644239 TTCAGGTACGAAAAA GGCGTC GAAA GACGCC TTTATAATTCGTAAT Patl_3849 4645705 - 4644275 - | aldehyde dehydrogenase Patl_3850 4647356 - 4645716 - | acetolactate synthase Patl_3851 4649004 - 4647517 - | adenylate cyclase TERM 4452 4647667 - 4647679 + g 76 -7.7 -4.23213 | GCTGCTCCCCTGGTG TGCGT CAT ACGCA TTTATTGCATCTAAG TERM 4453 4647709 - 4647723 + g 79 -8.6 -4.20918 | opp_overlap 4647708 GGCACCCCATATGAC CTTGCA TGC TGCAAG TTTATTGCGCTTGGA Patl_3852 4649149 - 4649748 + | SH3, type 3 TERM 4454 4649784 - 4649769 - f 83 -11.8 -3.19936 | opp_overlap 4649769, overlap 4649757 AATCAGCTAATGGAA GCCGCC AATG GGCGGC TTTTTTGCGTTATAC TERM 4455 4649769 - 4649784 + F 100 -11.8 -5.1925 | opp_overlap 4649757 4649769 AATCAGCTAATGGAA GCCGCC AATG GGCGGC TTTTTTGCGTTATAC Patl_3853 4649830 - 4650471 + | lysine exporter protein LysE/YggA Patl_3854 4650512 - 4651015 + | hypothetical protein Patl_3855 4651017 - 4652780 + | hypothetical protein TERM 4456 4652840 - 4652804 - f 72 -4.5 -4.66318 | gap 1, opp_overlap 4652804 4652805, overlap 4652805 ATTAGTTGAATAAAA TCCCTTAAGGCTTAGC TGAGCG GCTAA-CCTTAGGGGC TTATACTAGCCGCGA TERM 4457 4652805 - 4652839 + F 76 -10.9 -2.64099 | gap 1, opp_overlap 4652805 4652804, overlap 4652804 TTAGTTGAATAAAAT CCCTTAAGGCTTAGCT GAGC GGCTAA-CCTTAGGGG CTTATACTAGCCGCG Patl_3856 4652929 - 4653207 + | septum formation initiator Patl_3857 4653214 - 4653909 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Patl_3858 4653906 - 4654394 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Patl_3859 4654399 - 4655451 + | pseudouridylate synthase Patl_3860 4655448 - 4656194 + | stationary-phase survival protein SurE Patl_3861 4656283 - 4656921 + | protein-L-isoaspartate O-methyltransferase Patl_3862 4657088 - 4657972 + | hypothetical protein TERM 4458 4658434 - 4658421 - g 75 -6.7 -4.38712 | overlap 4658428 GCCACTGTTACAAAA GAGGT AACT ACCTC TTCCGGCAGTGAGTT Patl_3863 4658013 - 4658831 + | peptidase M23B Patl_3864 4658897 - 4659880 + | RNA polymerase, sigma 28 subunit TERM 4459 4659927 - 4659905 - T 100 -8.5 -5.63517 | gap 1, opp_overlap 4659905 CTCCTAAACAAAAAA TGCCGC-TCT ATTA AGAAGCGGCA TTTTTTACGCGATAT TERM 4460 4659905 - 4659927 + T 90 -8.5 -5.02476 | gap 1, opp_overlap 4659905 CTCCTAAACAAAAAA TGCCGC-TCT ATTA AGAAGCGGCA TTTTTTACGCGATAT Patl_3865 4660379 - 4659969 - | late embryogenesis abundant protein Patl_3866 4661058 - 4661654 + | putative transmembrane protein TERM 4461 4661686 - 4661703 + F 90 -8.4 -5.0925 | opp_overlap 4661686 TTTTGAATTATCAGA CGGCTC AGAAAA GAGCCG TTTTTACTTTTGAAA Patl_3867 4661821 - 4662153 + | SecC motif-containing protein Patl_3868 4662956 - 4662204 - | putative hydrolase TERM 4462 4663484 - 4663463 - g 72 -3.1 -4.97957 | gap 1, overlap 4663455 TACACAATAATAAAA TTATCG-GAC GAG GTCACAATAA GCGCGTGCAAAGTGG Patl_3869 4663366 - 4663803 + | cytosine deaminase TERM 4463 4663958 - 4663968 + G 76 -4 -5.03201 | GGTATCGCTGATATC TACA GTA TGTA TTTTTGGTTATTATT Patl_3870 4663917 - 4664381 + | hypothetical protein Patl_3871 4664383 - 4664595 + | XRE family transcriptional regulator TERM 4464 4664629 - 4664602 - T 100 -10 -5.81032 | opp_overlap 4664607 GAAGGGTAAAAAAAA GCAAAGGTTAGT GTGC ACTAATCTTTGC TTAAGCTATTTATAA Patl_3872 4666309 - 4664747 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 4465 4666445 - 4666463 + H 77 -11 -2.75382 | opp_overlap 4666443, overlap 4666442 CACTCTTCAACTATT CTTGACCC AAT GGGTCGAG TAGTTGAATAAACTG TERM 4466 4666830 - 4666809 - H 70 -8.7 -3.40522 | ATTTGTTCACTATAA TGCGCGACT TTAC AGTCCCGCA ACTAGGTATTAATGG Patl_3873 4666842 - 4668770 + | arginine decarboxylase TERM 4467 4668820 - 4668794 - T 80 -4.3 -5.243 | opp_overlap 4668794 TAAATCACTAAAAAA GCCCAGTCTCG TTTTT CAATTCTGGGC TTTTTTATTTCATTT TERM 4468 4668794 - 4668820 + T 84 -2.1 -5.74086 | opp_overlap 4668794 TAAATCACTAAAAAA GCCCAGTCTCG TTTTT CAATTCTGGGC TTTTTTATTTCATTT Patl_3874 4669924 - 4668845 - | beta-lactamase TERM 4469 4670328 - 4670348 + G 86 -3.1 -5.80364 | overlap 4670326 AGCGAGACTTACCCG CGATCCTCG TTT CGATGGGCG TTTTTTTATTGCGGT Patl_3875 4670287 - 4671660 + | AraC family transcriptional regulator Patl_3876 4671660 - 4672163 + | methylated-DNA--protein-cysteine methyltransferase Patl_3877 4672182 - 4673084 + | hypothetical protein Patl_3878 4674596 - 4673172 - | diguanylate cyclase Patl_3879 4674986 - 4676347 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 4470 4676390 - 4676372 - f 79 -8.9 -3.87576 | opp_overlap 4676372 GTAGAATAAGTGAAA CCTCCAA CTCCT TTGGAGG TTTTTTTGTATCTAA TERM 4471 4676372 - 4676390 + F 100 -8.9 -5.76633 | opp_overlap 4676372 GTAGAATAAGTGAAA CCTCCAA CTCCT TTGGAGG TTTTTTTGTATCTAA Patl_3880 4676420 - 4677250 + | DeoR family transcriptional regulator TERM 4472 4678369 - 4678350 - g 72 -5 -4.72986 | gap 1 TACGCCTAGCAAAAA GCTTG-GGC TAC ACCTCAAGC TTAACCATATGTAAC Patl_3881 4677254 - 4679086 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 4473 4679180 - 4679148 - T 84 -10 -3.922 | gap 1, opp_overlap 4679156, overlap 4679128 4679149 AAACTTGGAATTAAA GTTTGAAACCGGCTC GAAT GAGCTGGTTTC-AAC GCAGTCCGACAAAAT TERM 4474 4679180 - 4679149 - T 75 -10.2 -2.94597 | opp_overlap 4679156, overlap 4679128 4679148 AACTTGGAATTAAAG TTTGAAACCGGCTC GAAT GAGCTGGTTTCAAC GCAGTCCGACAAAAT TERM 4475 4679156 - 4679173 + T 74 -9.1 -3.53811 | opp_overlap 4679148 4679149 AATTAAAGTTTGAAA CCGGCTC GAAT GAGCTGG TTTCAACGCAGTCCG Patl_3882 4680504 - 4679431 - | phosphate-selective porin O and P TERM 4476 4679910 - 4679925 + g 73 -10.4 -3.07935 | TTATGCTATATGTAT CGCCGT GCAT ACGGCG TTGGCTGGATGCGAT TERM 4477 4680487 - 4680473 - G 70 -4.9 -4.40572 | overlap 4680463 4680483 ACAATCGCTAGAAAA GCGCA AAAGA CGCGC AATTGGGGCGTGCTC Patl_3883 4681510 - 4680524 - | aldo/keto reductase Patl_3884 4682477 - 4681539 - | oxidoreductase-like TERM 4478 4681601 - 4681617 + g 74 -3.7 -4.93877 | overlap 4681589 ATACTTGACCAATGC TCGAG TTGGGTT CTCGA TTTTCTTTAATAGCA TERM 4479 4682331 - 4682357 + g 76 -2.2 -5.41787 | opp_overlap 4682331, overlap 4682332 TAAATCTGTGAAAAT GTGTGGGATG CCATATT CATCCGCCAC TTTTTGTGTTTTTTC Patl_3885 4683326 - 4682487 - | protocatechuate 4,5-dioxygenase subunit beta Patl_3886 4683712 - 4683326 - | protocatechuate 4,5-dioxygenase subunit alpha TERM 4480 4683516 - 4683530 + g 76 -4.2 -4.97957 | CGATTGTAATCACGA GAAAGG ACA CCTTGC TTTTGTTCTTCTGTC Patl_3887 4684630 - 4683722 - | amidohydrolase 2 Patl_3888 4685646 - 4684627 - | amidohydrolase 2 TERM 4481 4685074 - 4685041 - G 74 -6 -4.56775 | ATTTCCTTCTAAAAA CTGCATGAAAGCCG TGGTAT CAGCGTTCATGTAG TGGGCACCCGTAGCA Patl_3889 4686811 - 4685714 - | hypothetical protein TERM 4482 4686029 - 4686010 - G 79 -9.2 -4.18018 | TCCGGGTATTCAAAA CCCCGCCT TTCA AGGCTGGG GATATCAGAGACATT Patl_3890 4687500 - 4686814 - | hypothetical protein TERM 4483 4687346 - 4687362 + g 74 -8.7 -3.91897 | overlap 4687340 CAAGTCACTGCTGGG CCTGCTA CTT TAGCGGG TTTGTAAATCGGACG Patl_3891 4687629 - 4688831 + | LysR family transcriptional regulator Patl_3892 4689726 - 4688845 - | AraC family transcriptional regulator TERM 4484 4689904 - 4689888 - g 70 -2.2 -5.08255 | gap 1, overlap 4689889 4689890 ACCGTTAAAACAAAA GTCGCCA TTAT CGGCG-C AGGACCATCAGGATT Patl_3893 4689867 - 4691081 + | 4-hydroxybenzoate 3-monooxygenase Patl_3894 4692963 - 4691875 - | hypothetical protein Patl_3895 4694442 - 4693000 - | betaine-aldehyde dehydrogenase Patl_3896 4694531 - 4694776 + | hypothetical protein Patl_3897 4694882 - 4696126 + | LysR family transcriptional regulator Patl_3898 4698110 - 4696338 - | Fis family transcriptional regulator TERM 4485 4696395 - 4696413 + g 71 -9.6 -3.19246 | AGTCATCCCTAATTT TCTTGCTG CTT CAGCGAGA TTACCTTCGGCTTGC TERM 4486 4696886 - 4696868 - G 79 -9.6 -3.74747 | opp_overlap 4696868 TTAAGCGGTACCAAA GGTCGTCT CGA AAACGACC TTCACTAACATCTAT TERM 4487 4697933 - 4697923 - G 90 -6.8 -5.28778 | overlap 4697929 ATGACTGAGAAAAAA GCCA AAT TGGC GATTAACAAGCGATT TERM 4488 4699374 - 4699394 + G 72 -9 -3.48807 | opp_overlap 4699372 4699373, overlap 4699387 AGAGAAGATTAAAGC GCTGTGCC CTGAT GGCATAGC TTATGGCTTTGATAC Patl_3899 4698619 - 4699737 + | zinc-binding alcohol dehydrogenase TERM 4489 4699943 - 4699929 - g 79 -2.8 -5.27938 | overlap 4699930 ATGCTGAAATAAAAA GCTTGT TGA ACAAGT ATGCAAAGTCAGTAG Patl_3900 4699844 - 4700320 + | hypothetical protein TERM 4490 4700340 - 4700366 + F 84 -8 -4.77216 | opp_overlap 4700340 CCCCCACCACCTAAA GCACAGGACA ACGTATC TGACCTGTGC TTTTTCAATCTTCTT TERM 4491 4700366 - 4700340 - f 73 -8.7 -3.68351 | opp_overlap 4700340 CCCCCACCACCTAAA GCACAGGACAA CGTAT CTGACCTGTGC TTTTTCAATCTTCTT TERM 4492 4702218 - 4702199 - g 83 -6.4 -4.97158 | TCATAGCAAAGAAAA CTTGGGGA TCTA TACCCAAG CCGAGTACGACTTAA TERM 4493 4702294 - 4702282 - g 85 -6.3 -5.21709 | opp_overlap 4702282 GGTCAGACGAAAAAA TAGTC GCA GACTA TTTACCTTCATCACC Patl_3901 4700925 - 4703318 + | TonB-dependent receptor, plug Patl_3902 4703334 - 4704272 + | beta-lactamase-like TERM 4494 4704293 - 4704335 + T 71 -9.4 -2.87931 | gap 1, opp_overlap 4704292 4704291 4704293, overlap 4704302 TAGTCACGAAAAAGT C-CTAGATAATCGCAAGAT AAAATC ATCATGCGGTTATCTAGAG TATCTGACAACTCGA TERM 4495 4704334 - 4704293 - T 72 -10.3 -2.66218 | opp_overlap 4704293 4704302, overlap 4704292 4704291 TAGTCACGAAAAAGT CCTAGATAATCGCAAGATA AAAT CATCATGCGGTTATCTAGA GTATCTGACAACTCG TERM 4496 4704513 - 4704495 - T 80 -10.2 -3.77832 | TTGTAAATTCAACAA CGTCGCGG TCA CCGCTACG CGAATAATGAAGGGA TERM 4497 4705049 - 4705032 - T 72 -9.9 -3.01497 | opp_overlap 4705026, overlap 4705027 GTATCTCAAAGCATA GCCAGTT TAAT AACTGGC TGGCATTCCGTTTAC Patl_3903 4706650 - 4705190 - | sulfatase Patl_3904 4709024 - 4706736 - | TonB-dependent receptor TERM 4498 4708798 - 4708809 + g 79 -2.2 -5.47821 | GCAATATCACCTATA TCGG TTAA CTGA TTTTTTTCGATCGCT Patl_3905 4709833 - 4710468 + | TetR family transcriptional regulator TERM 4499 4711286 - 4711315 + G 73 -10.1 -3.32819 | gap 1, opp_overlap 4711285, overlap 4711285 CTATGGGAAGAAAGT CTCCCTTAGAGATC TAT GGTC-CTGAGGGAG TTGTAGACATGTCTA Patl_3906 4710919 - 4711848 + | beta-lactamase-like TERM 4500 4712536 - 4712519 - f 73 -5.6 -4.57569 | opp_overlap 4712519 TTACCTTTCTAAAAA GTTGAC ACGAGA GTCAAC TTTACATATATTTAT Patl_3907 4712685 - 4714154 + | twin-arginine translocation pathway signal Patl_3908 4714192 - 4714515 + | cytochrome c, class I Patl_3909 4714577 - 4715029 + | hypothetical protein TERM 4501 4715168 - 4715185 + T 73 -9.9 -3.15732 | opp_overlap 4715168, overlap 4715166 4715165 AGCTGCTGAATACAA GCCAGTT ATAT AACTGGC TACTTTCTTACTTAT TERM 4502 4715185 - 4715168 - T 79 -9.9 -3.65991 | opp_overlap 4715168 4715166 4715165 AGCTGCTGAATACAA GCCAGTT ATAT AACTGGC TACTTTCTTACTTAT Patl_3910 4716150 - 4715548 - | hypothetical protein Patl_3911 4717119 - 4716400 - | PaaX-like TERM 4503 4719047 - 4719026 - g 70 -9.5 -3.08812 | gap 1, opp_overlap 4719026 4719038, overlap 4719025 GGTGGTGGAACAAAT GGCA-CTTGC ACT GCAAGGTGCC TTGCTTTTAACTGCG TERM 4504 4719026 - 4719047 + G 79 -9.5 -3.69605 | gap 1, opp_overlap 4719025 4719026, overlap 4719038 GGTGGTGGAACAAAT GGCA-CTTGC ACT GCAAGGTGCC TTGCTTTTAACTGCG TERM 4505 4719129 - 4719151 + G 74 -7 -4.2717 | CAGGGACTAGCATTC GGTACGCT TCCCGCT AGCGTGCC TTTTGATGAAATCAT Patl_3912 4717545 - 4719191 + | acyl-CoA dehydrogenase-like Patl_3913 4719461 - 4720165 + | hypothetical protein Patl_3914 4722959 - 4720203 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 4506 4722226 - 4722169 - G 77 -8.8 -3.97331 | gap 2 AATCCATCTAAATAA CGAACCCCTAATATTCCAT-G-ATCAAT CGTA ATAGATGCGATGGAATAATAGGGGTTAG CGCTGTTTTCCGTGA TERM 4507 4723277 - 4723307 + H 100 -18.6 -4.76963 | opp_overlap 4723286 TTGGTGTCACATTTG TGGCAGATATTTCA AAA TGAAATATCTGCCA TTTTCTCTTATCTCC Patl_3915 4723477 - 4725996 + | periplasmic sensor hybrid histidine kinase TERM 4508 4726055 - 4726030 - T 70 -9.9 -2.54193 | opp_overlap 4726019, overlap 4726014 TATTATTCTAATCCA CGCTAATAAGT GAGC ACTTATTAACG TGGATCCGTACTAGA Patl_3916 4726959 - 4726066 - | LysR family transcriptional regulator Patl_3917 4727905 - 4727087 - | beta-lactamase-like Patl_3918 4728101 - 4728697 + | NTPase Patl_3919 4730998 - 4728746 - | periplasmic sensor signal transduction histidine kinase TERM 4509 4728984 - 4728999 + g 75 -6.2 -4.42806 | CCATCATTTTCAATG GTAAGT AAAT ACTTAC TTTCTTTCAGGCTAA TERM 4510 4731008 - 4731019 + r 73 -5.8 -4.57569 | ACTCATCAAGGTTAA TGGC TCAT GCCA TTTTTCCAGCGATAA Patl_3920 4731717 - 4731004 - | two component transcriptional regulator TERM 4511 4731599 - 4731566 - G 73 -11.2 -2.53382 | gap 2 ATGATCGCCAAGTCA GGCAGGCGCTGAGCAA AACC TTGCTCAGC-C-TGCC GGCGATTGGCATAAC Patl_3921 4731949 - 4732773 + | OmpA/MotB Patl_3922 4733082 - 4735187 + | vault protein inter-alpha-trypsin TERM 4512 4735477 - 4735467 - g 80 -5.4 -4.91712 | overlap 4735473 4735474 CGCAAGCCATAAAAA CCAA ACC TTGG CCATGGGCTGATACC Patl_3923 4735184 - 4735900 + | sortase family protein Patl_3924 4736112 - 4736573 + | hypothetical protein Patl_3925 4736705 - 4738138 + | putative esterase Patl_3926 4738759 - 4738169 - | carboxymuconolactone decarboxylase TERM 4513 4738939 - 4738954 + H 78 -4 -5.35354 | gap 1, overlap 4738941 GTGTGAGTACATCCA GC-CAAC AAC GTTGTGC TTTTTTCATTGTGTC TERM 4514 4739719 - 4739729 + G 76 -4 -4.98531 | opp_overlap 4739719 TGCCACCTTAAATAT TGAA ACA TTCA TTTTTGATTTAGCAG Patl_3927 4739036 - 4739995 + | ABC transporter related Patl_3928 4739988 - 4740758 + | ABC-2 type transporter Patl_3929 4740773 - 4741450 + | putative methyltransferase Patl_3930 4742221 - 4741496 - | diguanylate phosphodiesterase TERM 4515 4743990 - 4743980 - g 72 -5.4 -4.45517 | AAATGATTTACAAAA CATC CTG GATG AGCAAATCGCGATTG Patl_3931 4742442 - 4744052 + | pyridoxal-dependent decarboxylase TERM 4516 4744079 - 4744102 + T 100 -15.4 -4.77036 | opp_overlap 4744079 GGACCCCACTAAAAA GGCCGTTAGT TCAC ACTAACGGCC TTTTTGCTAATGAAG TERM 4517 4744102 - 4744079 - T 100 -15.4 -4.7373 | opp_overlap 4744079 GGACCCCACTAAAAA GGCCGTTAGT TCAC ACTAACGGCC TTTTTGCTAATGAAG Patl_3932 4744985 - 4744134 - | pantoate--beta-alanine ligase TERM 4518 4744512 - 4744532 + g 72 -4.7 -4.56597 | GACCATGGCTTTAAT GACTTGTAG TTG CTGAAAGTC TTTTTCACCAAAGAA Patl_3933 4745790 - 4744993 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase Patl_3934 4746365 - 4745877 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Patl_3935 4747609 - 4746362 - | poly(A) polymerase TERM 4519 4747270 - 4747282 + g 77 -9.1 -3.9093 | opp_overlap 4747269 TAACGGTGAAGTCAC GACGC TCT GCGTC TTCTTCTATGCTGCC Patl_3936 4748734 - 4747817 - | glutamate--tRNA ligase TERM 4520 4748352 - 4748365 + g 72 -8.1 -3.66178 | GCTAACTGCGCGCAG GGGCA AGAT TGCCC TTTAGGGTTGGCAAG TERM 4521 4748788 - 4748757 - R 70 -8.3 -3.38581 | gap 1, opp_overlap 4748757 4748760 4748765, overlap 4748765 AGTAACGTGTAAACA TAAA-AAAAGCTGC ATTGA GCAGCTTTTCTTTA TTTATCAGTATTAAC TERM 4522 4748757 - 4748788 + r 79 -8.3 -3.9777 | gap 1, opp_overlap 4748757 4748765, overlap 4748760 4748765 AGTAACGTGTAAACA TAAA-AAAAGCTGC ATTGA GCAGCTTTTCTTTA TTTATCAGTATTAAC TERM 4523 4748760 - 4748784 + r 81 -7.2 -4.58085 | opp_overlap 4748757 4748765, overlap 4748757 4748765 AACGTGTAAACATAA AAAAAGCTGC ATTGA GCAGCTTTTC TTTATTTATCAGTAT TERM 4524 4748779 - 4748765 - R 100 -7.1 -5.88197 | opp_overlap 4748760 4748757 4748765, overlap 4748757 GTAAACATAAAAAAA GCTGC ATTGA GCAGC TTTTCTTTATTTATC TERM 4525 4748765 - 4748779 + r 90 -7.1 -5.22481 | opp_overlap 4748765 4748757, overlap 4748760 4748757 GTAAACATAAAAAAA GCTGC ATTGA GCAGC TTTTCTTTATTTATC Patl_3937 4749248 - 4748799 - | TraR/DksA family transcriptional regulator TERM 4526 4749129 - 4749149 + g 76 -4 -4.91873 | opp_overlap 4749129 CCATGCTTTTAGCAA CAAACGGA AATGC TCCATTTG TTTTTCATTCATGTA Patl_3938 4750119 - 4749415 - | sugar fermentation stimulation protein TERM 4527 4750454 - 4750433 - g 81 -3.8 -5.28683 | gap 1 ACGAACACCAAAAAA CAACACCAT ATTCA ATGG-GTTG ATGACGAGAATAGCG TERM 4528 4750489 - 4750499 + G 74 -5.4 -4.60487 | GCTAACGCAGCGCTA CCAA GCC TTGG TTTTTACCCGTAATC Patl_3939 4750187 - 4751470 + | aminopeptidase B TERM 4529 4751511 - 4751537 + T 73 -9.5 -3.16564 | opp_overlap 4751510 4751508 4751512 GCAGATGCAAAACAG ACTTAGGTACG CTGGT CGTACCTAAGG TTACTGAAATAGCAC TERM 4530 4751536 - 4751512 - T 93 -13 -3.43676 | opp_overlap 4751511, overlap 4751510 4751508 CAGATGCAAAACAGA CTTAGGTACG CTGGT CGTACCTAAG GTTACTGAAATAGCA Patl_3940 4751752 - 4751570 - | hypothetical protein Patl_3941 4751982 - 4752572 + | multiple antibiotic resistance (MarC)-related proteins TERM 4531 4753141 - 4753107 - g 74 -3.6 -5.09173 | overlap 4753109 CAACAGCCCAAAAAA TGGCGATACCTGTAAA GCC CTTAAAGACATCGCTA TTGGTGAAGGCATGA Patl_3942 4752595 - 4753185 + | hypothetical protein Patl_3943 4753816 - 4753232 - | putative methyltransferase Patl_3944 4753901 - 4755358 + | signal recognition particle-docking protein FtsY Patl_3945 4755430 - 4756104 + | cell division ATP-binding protein FtsE TERM 4532 4756787 - 4756802 + G 72 -5.4 -4.38092 | ACGATCATTGCGCTA CTGCTA TTTT TGGCAG TTATTTTGATTATTG Patl_3946 4756175 - 4757155 + | hypothetical protein Patl_3947 4758467 - 4757226 - | diguanylate phosphodiesterase Patl_3948 4758981 - 4759850 + | RNA polymerase, sigma 32 subunit, RpoH TERM 4533 4759907 - 4759859 - T 100 -16.3 -3.23711 | opp_overlap 4759875, overlap 4759875 GGCATAACTCAGTAA TTCAGACACAAAAAAAGCGCGTT ATA AACGCGCTTTTTTATTGCCTAAA AAATAATCACTGCTA TERM 4534 4759891 - 4759875 - T 100 -12.3 -5.76633 | opp_overlap 4759875, overlap 4759859 TCAGACACAAAAAAA GCGCGTT ATA AACGCGC TTTTTTATTGCCTAA TERM 4535 4759875 - 4759891 + T 100 -12.3 -5.4833 | opp_overlap 4759875 4759859 TCAGACACAAAAAAA GCGCGTT ATA AACGCGC TTTTTTATTGCCTAA Patl_3949 4760861 - 4759935 - | thioesterase domain-containing protein Patl_3950 4761394 - 4760957 - | D-tyrosyl-tRNA deacylase TERM 4536 4761253 - 4761263 + g 82 -6.8 -4.7416 | GGTAATTCAGCACGC GCTG AAA CAGC TTTTTGGCCTTTTCC Patl_3951 4762359 - 4761391 - | proline iminopeptidase TERM 4537 4762599 - 4762609 + G 75 -3.2 -5.252 | ATGCCCTAGCAGCCA CAGG TAT TCTG TTTTTTATGGCAGTG Patl_3952 4762454 - 4762681 + | hypothetical protein Patl_3953 4762702 - 4763340 + | hypothetical protein rbn 4764256 - 4763354 - | ribonuclease BN Patl_3955 4765177 - 4764293 - | 5,10-methylenetetrahydrofolate reductase TERM 4538 4765478 - 4765515 + G 82 -7.9 -4.68424 | gap 1, opp_overlap 4765457 4765453, overlap 4765507 GCCAGGTGAATAACC TGCGTCATGCAACGAACT CAG AGTT-GTTGTGTGAAGCA TTTTTACATGCCTTC Patl_3956 4765324 - 4765647 + | transcriptional repressor protein MetJ Patl_3957 4766416 - 4765751 - | glutathione S-transferase-like TERM 4539 4766509 - 4766542 + r 87 -12.5 -3.38581 | opp_overlap 4766516, overlap 4766516 TATATCTCTATTAAT GCAAAAAGGCTGAAG TTAT CTTCAGCCTTTAAGC TATTTACGCATTGAT TERM 4540 4766516 - 4766535 + r 89 -12.2 -3.695 | opp_overlap 4766516, overlap 4766509 CTATTAATGCAAAAA GGCTGAAG TTAT CTTCAGCC TTTAAGCTATTTACG TERM 4541 4766535 - 4766516 - R 100 -12.2 -4.7629 | opp_overlap 4766516 4766509 CTATTAATGCAAAAA GGCTGAAG TTAT CTTCAGCC TTTAAGCTATTTACG Patl_3958 4766898 - 4766572 - | cytochrome c, class I Patl_3959 4766965 - 4768407 + | hypothetical protein TERM 4542 4769171 - 4769186 + G 78 -6.1 -4.68645 | CACCTATACGTTATT GCGCA GCCCGG TGCGC TTTTGGTTTTCGGTA TERM 4543 4770554 - 4770566 + G 77 -10.5 -3.31726 | overlap 4770551 GCAGCTGCTCAGTAT GGCCG ATT CGGCC TGTTATATGGCGAAA TERM 4544 4771271 - 4771256 - g 70 -9 -3.46534 | CAATTCCATCAAAGA CATCGC CAGC GCGATG AAAATACAAACCGTA Patl_3960 4768536 - 4771433 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Patl_3961 4771522 - 4772136 + | GTP cyclohydrolase II TERM 4545 4772877 - 4772902 + G 85 -6.9 -5.03314 | gap 1, overlap 4772879 CGTGGTATATGGTGA TTGG-TGGTGGA CCG TCCACCAGCCCA TTTTTTGGCGCTCGC TERM 4546 4773291 - 4773270 - g 73 -9.5 -3.41051 | gap 1 TCATGGGCAGTATAA GCGA-GAGCA GAA TGCTCATCGC AAACAGAACACGCAT Patl_3962 4772305 - 4773633 + | hypothetical protein TERM 4547 4773709 - 4773673 - T 74 -4.6 -4.91109 | gap 2, opp_overlap 4773683, overlap 4773676 4773683 TCTTTAGGAGAAAAA GAAGCTAAAATAGCCTGC TGG GCAGGCTATTT--GCCTA TGCTGAATGAGGTAT TERM 4548 4773706 - 4773676 - T 87 -8.5 -4.56153 | gap 2, opp_overlap 4773683, overlap 4773673 4773683 TTAGGAGAAAAAGAA GCTAAAATAGCCTGC TGG GCAGGCTATTT--GC CTATGCTGAATGAGG TERM 4549 4773701 - 4773683 - T 100 -13.2 -4.43173 | opp_overlap 4773683, overlap 4773676 4773673 AAAAAGAAGCTAAAA TAGCCTGC TGG GCAGGCTA TTTGCCTATGCTGAA TERM 4550 4773683 - 4773701 + T 95 -13.2 -3.727 | opp_overlap 4773676 4773673 4773683 AAAAAGAAGCTAAAA TAGCCTGC TGG GCAGGCTA TTTGCCTATGCTGAA Patl_3963 4774068 - 4773736 - | hypothetical protein Patl_3964 4774574 - 4775626 + | peptidyl-arginine deiminase Patl_3965 4775623 - 4776531 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 4551 4776608 - 4776584 - T 93 -10.7 -4.77775 | opp_overlap 4776584 AGTGCATAAAATAAA GCCCCACTGAC TAG GTCATTAGGGC TTTTTTAATGAGCAA TERM 4552 4776584 - 4776608 + T 90 -8.5 -5.14563 | opp_overlap 4776584 AGTGCATAAAATAAA GCCCCACTGAC TAG GTCATTAGGGC TTTTTTAATGAGCAA Patl_3966 4777673 - 4776657 - | threonine dehydratase TERM 4553 4777883 - 4777861 - g 72 -8.4 -3.68073 | overlap 4777864 GATGTGAGCGAAGAA CTAGCACCGA TTA TCGGTGCCAC AGAAGAGGTTCAGCA TERM 4554 4777880 - 4777864 - g 80 -12.3 -2.94872 | overlap 4777861 GTGAGCGAAGAACTA GCACCGA TTA TCGGTGC CACAGAAGAGGTTCA Patl_3967 4777795 - 4778169 + | hypothetical protein TERM 4555 4778227 - 4778190 - T 95 -14.3 -3.16564 | opp_overlap 4778193 4778200, overlap 4778193 4778200 GCCTCATTTGAGCAA GTACGAAAAAGGCGACT GAAC AGTCGCCTTTTTCGTTT CAATATTCATTTACA TERM 4556 4778224 - 4778193 - T 100 -20.4 -2.78547 | opp_overlap 4778193 4778200, overlap 4778190 4778200 TCATTTGAGCAAGTA CGAAAAAGGCGACT GAAC AGTCGCCTTTTTCG TTTCAATATTCATTT TERM 4557 4778193 - 4778224 + T 100 -20.4 -3.79505 | opp_overlap 4778193 4778190 4778200, overlap 4778200 TCATTTGAGCAAGTA CGAAAAAGGCGACT GAAC AGTCGCCTTTTTCG TTTCAATATTCATTT TERM 4558 4778200 - 4778217 + T 95 -11.3 -5.00138 | opp_overlap 4778200 4778193 4778190, overlap 4778193 AGCAAGTACGAAAAA GGCGACT GAAC AGTCGCC TTTTTCGTTTCAATA TERM 4559 4778217 - 4778200 - T 95 -11.3 -4.81685 | opp_overlap 4778193 4778200, overlap 4778193 4778190 AGCAAGTACGAAAAA GGCGACT GAAC AGTCGCC TTTTTCGTTTCAATA Patl_3968 4780467 - 4778260 - | peptidase S9B, dipeptidylpeptidase IV-like TERM 4560 4779181 - 4779215 + g 82 -2.9 -5.58454 | overlap 4779184 4779190 AGAAGCGTCGTCGCT GAAGCTAGGCGC-GTGG GTA CCACTGCG-TTGGCTTA TTTTTTTGATATCGC TERM 4561 4779184 - 4779212 + g 73 -4.6 -4.86226 | overlap 4779181 4779190 AGCGTCGTCGCTGAA GCTAGGCGC-GTGG GTA CCACTGCG-TTGGC TTATTTTTTTGATAT TERM 4562 4779358 - 4779380 + g 70 -4.9 -4.55287 | gap 1 GTCGCCTTTCGTCAA CTGAC-GTAC CAAG GTGCCGTCAG TTTTATATAGGTAAA TERM 4563 4780167 - 4780179 + g 76 -4.8 -4.77036 | CACTAAGACGCATGC GCTC ACGGC GAGC TTTTTCCTCATCAGA Patl_3969 4780531 - 4781181 + | NAD-dependent epimerase/dehydratase Patl_3970 4781225 - 4782016 + | methyltransferase small Patl_3971 4782130 - 4782507 + | hypothetical protein Patl_3972 4783777 - 4782584 - | putative iron-sulfur cluster binding protein TERM 4564 4782627 - 4782640 + g 74 -3.8 -5.06414 | opp_overlap 4782627 ATGCTGCGAATTAAC CGCT GATTTA AGCG TTTTTCTTGCGGGGC TERM 4565 4783310 - 4783321 + g 80 -7.2 -4.56597 | GTGCTTACCCGTCCA GCCG ATAC CGGC TTTTTCCGCCAGCGC TERM 4566 4783393 - 4783414 + g 100 -8.7 -5.15381 | overlap 4783384 TAGCGGTTGTACATT CTGTGCGAA TTTT TTCGCCCAG TTTTTTCAATCTATT TERM 4567 4783871 - 4783861 - g 88 -8.2 -4.87626 | overlap 4783862 4783863 CGTCAACAGGAAAAA GCCG CCG CGGC AGCCAGCGGCTATCA TERM 4568 4784557 - 4784516 - g 72 -8.1 -3.76534 | gap 1, opp_overlap 4784529 4784530, overlap 4784530 TGAATAAACGTGAAA CCAATGCCCACAAA-GGCCA CTT TGGCCGTTTACTGACACTGG GTGCCAATACAGGCA TERM 4569 4784542 - 4784530 - g 77 -9.1 -3.89881 | opp_overlap 4784530 4784529, overlap 4784516 ACCAATGCCCACAAA GGCCA CTT TGGCC GTTTACTGACACTGG TERM 4570 4784609 - 4784635 + G 72 -10.8 -2.79289 | opp_overlap 4784602, overlap 4784608 CGAGTGAAGCCGCAC TTCGCACAGGCG CAG CGCTAGTGCGAG CTTATTGCCATGGTG Patl_3973 4783786 - 4785300 + | carbohydrate kinase, YjeF related protein TERM 4571 4785495 - 4785472 - g 73 -7.4 -4.18762 | overlap 4785459 AAGGGCGAGTTAAAA GCCCCACC TATACACT GGTGGAGC CATACGAAATAAATG Patl_3974 4785297 - 4785758 + | hypothetical protein Patl_3975 4785800 - 4787092 + | N-acetylmuramoyl-L-alanine amidase Patl_3976 4787142 - 4789061 + | DNA mismatch repair protein MutL TERM 4572 4789869 - 4789858 - g 74 -5.8 -4.60924 | GAAATGCGCGAAAAA GGCT TGGC AGCC ACCAGACAACTGGCT Patl_3977 4789045 - 4789992 + | tRNA delta(2)-isopentenylpyrophosphate transferase Patl_3978 4790072 - 4790323 + | RNA chaperone Hfq Patl_3979 4790349 - 4791647 + | GTP-binding protein, HSR1-related TERM 4573 4792201 - 4792189 - g 73 -7.7 -4.07877 | opp_overlap 4792188 4792189, overlap 4792200 CTAGCCCAGAAACAA GCTTG AGC CAAGC GTTTGACAGTGCCAT Patl_3980 4791711 - 4792859 + | HflK protein Patl_3981 4792863 - 4793747 + | HflC protein TERM 4574 4793818 - 4793788 - T 79 -3.2 -5.40072 | opp_overlap 4793796, overlap 4793796 GCTCTTTGAAAAAAA CGTGAAAAGCGCCA ATT TGGCGCTTTTTTTA TGCTTGTTTCTCATG TERM 4575 4793810 - 4793796 - T 93 -11.4 -4.35095 | opp_overlap 4793796, overlap 4793788 AAAAAAACGTGAAAA GCGCCA ATT TGGCGC TTTTTTTATGCTTGT TERM 4576 4793796 - 4793810 + T 100 -11.4 -5.73339 | opp_overlap 4793796 4793788 AAAAAAACGTGAAAA GCGCCA ATT TGGCGC TTTTTTTATGCTTGT Patl_3982 4794533 - 4794102 - | hypothetical protein TERM 4577 4794136 - 4794166 + g 76 -2.5 -5.32882 | CAGAATTGAATTTCG CCATCACCGTGTT CTATT AGTACGCTGAAGG TTTTTTCTGCTAATA TERM 4578 4794542 - 4794514 - G 74 -6.9 -4.34402 | gap 1 CTGGTGATATCAAAA GACGAGCGTAAT TTAGAC ATTACGCT-GTC CCTCGTGCTTTCTTT Patl_3983 4795246 - 4794587 - | glutathione S-transferase-like Patl_3984 4795868 - 4795260 - | glutathione S-transferase-like TERM 4579 4795845 - 4795822 - G 100 -7.4 -5.60993 | gap 1, opp_overlap 4795821 4795822 TCGGCCAGAAAAAAA CGCACTCGACG GGG CGTAG-GTGCG GTTTGCGTTTCGTAT Patl_3985 4797812 - 4795917 - | extracellular solute-binding protein TERM 4580 4797874 - 4797862 - R 70 -9.1 -3.18571 | opp_overlap 4797861, overlap 4797858 4797860 GGCTTCAAAGATATA CAGCG CCG CGCTG CTAATTCATCCCTAC Patl_3986 4798425 - 4798006 - | hypothetical protein Patl_3987 4799507 - 4798425 - | ferrochelatase Patl_3988 4801208 - 4799610 - | AbgT putative transporter Patl_3989 4801430 - 4801963 + | hypothetical protein TERM 4581 4802490 - 4802505 + G 70 -9 -3.29947 | opp_overlap 4802482 4802481 4802489 CTACAACCAGCAATC GTCTGC TGAT GCAGAC TTGATATCGTCCATG Patl_3990 4801972 - 4803729 + | OmpA/MotB Patl_3991 4803747 - 4804250 + | small GTP-binding protein TERM 4582 4805365 - 4805352 - g 81 -5.3 -5.1101 | TTATTAGGCAAAAAA CTGTT ACTG AACAG CAATGTATTGATCTT TERM 4583 4805764 - 4805784 + G 75 -11.1 -2.97513 | GCCTGATGAGTTTAT CCCGATTGC AGA GCAAACGGG TCTCATTGTGCCTAT Patl_3992 4804247 - 4806403 + | diguanylate cyclase/phosphodiesterase Patl_3993 4807544 - 4806360 - | glutaryl-CoA dehydrogenase Patl_3994 4808661 - 4807609 - | aldo/keto reductase TERM 4584 4808119 - 4808132 + g 70 -2.3 -5.04356 | CGTTTCATTTGATAG TCCAC AATG GCGGA TTTTTCCTTGTTTAA TERM 4585 4808689 - 4808703 + r 79 -8.6 -4.08767 | TTTGGTTTTCACATT TGCCAT GAC ATGGCA TTTTAAAGCAGTCAG Patl_3995 4809128 - 4808715 - | hypothetical protein TERM 4586 4809316 - 4809292 - R 78 -10.8 -3.05384 | gap 1 CGCCGCCTGACTGAA CGG-GCACACA GGAT TGTGTGCACCG GACCGCGTTGCCAGG TERM 4587 4809384 - 4809369 - R 100 -6.8 -5.77988 | opp_overlap 4809369, overlap 4809361 ATAGACATAAAAAAA GGCCAC CGAA GTGACC TTTCTTTCAAATCAA TERM 4588 4809664 - 4809677 + r 71 -5.2 -4.53303 | overlap 4809665 CCGCATCACCAGGGA CGGG TTAAAC CCCG TTTTGTCTGGACATA TERM 4589 4809714 - 4809699 - R 100 -6.8 -5.71712 | opp_overlap 4809699 CTGGACATAAAAAAA GGCCAC CGAA GTGACC TTTCTTTCAAATCAA Patl_3996 4810925 - 4809741 - | elongation factor Tu TERM 4590 4810719 - 4810737 + g 71 -10.4 -2.64099 | overlap 4810718 AGTAGGCGTATCGTA TTCAACGT GAG ACGTTGAA ATTGTGATACCACGC TERM 4591 4811459 - 4811473 + r 85 -4.2 -5.63012 | overlap 4811460 AAATTGCAGCTAATT TGCCTT TAT AAGGCC TTTTTGTTTGTTTTT TERM 4592 4811460 - 4811472 + r 73 -7.7 -3.92317 | overlap 4811459 AATTGCAGCTAATTT GCCTT TAT AAGGC CTTTTTGTTTGTTTT Patl_3997 4812251 - 4811511 - | Baf family transcriptional activator Patl_3998 4813221 - 4812235 - | biotin--acetyl-CoA-carboxylase ligase Patl_3999 4814255 - 4813218 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 4593 4813555 - 4813580 + g 75 -6.1 -4.42238 | AAGAAACTACCAGCA TTGCCCAATAC ACTT GGATCGGGCAA TTTTGCTTGGCGTAC TERM 4594 4814130 - 4814146 + g 91 -10.9 -4.30576 | opp_overlap 4814128 TTGAGCGATAAAGGT GTGTGCA CTG TGCACAC TTTTAATACTGACAA Patl_4000 4816429 - 4814303 - | protein-tyrosine kinase TERM 4595 4814529 - 4814505 - G 71 -10.7 -2.71325 | opp_overlap 4814503 4814505 4814521, overlap 4814488 4814502 CCATCGACAAACTTA CCGACAGCGAT TGC ATCGCTGACAG TGTTAATTGGCGGCG Patl_4001 4817010 - 4816432 - | polysaccharide export protein TERM 4596 4817024 - 4817053 + r 79 -11.4 -2.56046 | opp_overlap 4817006 4817024, overlap 4817014 ATCCATGACAATTAA TGCGCCGCTGGC GCATAA GCAAGTGGCGCA TCAATTAAGATTTCC TERM 4597 4817038 - 4817024 - R 88 -11.4 -3.4759 | opp_overlap 4817024 4817014, overlap 4817006 ATCCATGACAATTAA TGCGCC GCT GGCGCA TAAGCAAGTGGCGCA Patl_4002 4818867 - 4817020 - | polysaccharide biosynthesis protein CapD TERM 4598 4818564 - 4818554 - G 80 -6.8 -4.63218 | overlap 4818562 GTGGTGGGAACAAAA GCCT GAA AGGC ATAGCGCGCCGCAAA Patl_4003 4820042 - 4818864 - | DegT/DnrJ/EryC1/StrS aminotransferase Patl_4004 4820705 - 4820070 - | pilin glycosylation protein Patl_4005 4821315 - 4820695 - | sugar transferase Patl_4006 4822492 - 4821308 - | glycosyl transferase, group 1 TERM 4599 4822189 - 4822174 - G 76 -4.7 -4.8048 | CGGGTACATGAAAAA TACGC GGAATA GCGTA GCCTCGAAGCGCTAA Patl_4007 4823661 - 4822489 - | glycosyl transferase, group 1 TERM 4600 4823044 - 4823018 - G 72 -5.9 -4.40963 | opp_overlap 4823018, overlap 4823019 ATTTGCGAAAAAGAA CCCACGAAAAC TAACT GTTTTCCTGGA GTATTAAACACCCTA TERM 4601 4823453 - 4823441 - G 73 -7.7 -4.11751 | overlap 4823449 AGTAACCCGGCAAAA CCTAC ATA GTAGG GTAGCCCTACAAAGG TERM 4602 4823463 - 4823449 - G 70 -10 -3.00786 | overlap 4823441 GGCAAAACCTACATA GTAGGG TAG CCCTAC AAAGGTAACGTCAAG TERM 4603 4823600 - 4823590 - G 70 -2.4 -5.07941 | AAAATGATATAAAAA CGCG CTG CTCG TCCAAACCTTTTGAT Patl_4008 4825025 - 4823667 - | hypothetical protein TERM 4604 4823713 - 4823703 - G 89 -4 -5.69068 | TAAAAACATAAAAAA CATT GCA AATG CACAGCCAAATATTA Patl_4009 4826106 - 4825009 - | glycosyl transferase, group 1 Patl_4010 4827361 - 4826099 - | hypothetical protein TERM 4605 4826170 - 4826158 - G 73 -4.1 -4.79075 | overlap 4826159 AAAAACCGAACAAAA CGCAT TCT ATGCA GGTAGCGAATACCAT Patl_4011 4828515 - 4827808 - | hypothetical protein TERM 4606 4828701 - 4828682 - R 100 -11.4 -5.50313 | TATAAAATGAAAAAA GCCGCCTC GAAG GAGACGGC TAGGATGATCAATTT Patl_4013 4831019 - 4830363 - | carbonate dehydratase Patl_4014 4831158 - 4832102 + | LysR family transcriptional regulator TERM 4607 4832289 - 4832270 - f 79 -5.6 -4.91109 | overlap 4832274 GCTTGATGAGAAAAA CGAGGCTC TGTG GAGCACCG CCCCAACCATTTTAA TERM 4608 4832393 - 4832406 + F 76 -3.1 -5.24129 | CTTTAAAATACGATT TCGAC TACA GTTGA TTTTTTATAGCGCAG TERM 4609 4832458 - 4832426 - f 84 -12.8 -2.94365 | opp_overlap 4832433, overlap 4832433 TTATAGCGCAGAAAC GAAAAAAGCCACCC GATTA GGGTGGCTTCATTC TAAATGGGAGTCTGG TERM 4610 4832451 - 4832433 - f 100 -11.7 -5.42514 | opp_overlap 4832433, overlap 4832426 GCAGAAACGAAAAAA GCCACCC GATTA GGGTGGC TTCATTCTAAATGGG TERM 4611 4832433 - 4832451 + F 89 -11.7 -3.45945 | opp_overlap 4832433 4832426 GCAGAAACGAAAAAA GCCACCC GATTA GGGTGGC TTCATTCTAAATGGG TERM 4612 4832692 - 4832713 + F 93 -10.1 -4.87665 | opp_overlap 4832692 TGCACATGCAAAAAA GGGCTAACC TTAC GGATAGCCC TTTTTCTAAATGGGA TERM 4613 4832713 - 4832692 - f 93 -10.1 -5.1287 | opp_overlap 4832692 TGCACATGCAAAAAA GGGCTAACC TTAC GGATAGCCC TTTTTCTAAATGGGA TERM 4614 4832822 - 4832805 - f 80 -11.3 -2.75064 | overlap 4832802 4832807 TGCCCGACCGAACGA CACGCCA TGGA TGGCGTG GCTGGTGCGCAACAC TERM 4615 4832923 - 4832904 - f 83 -9.2 -4.09685 | opp_overlap 4832911 4832911 CTTGATGGGTGAAAA CGGGGCTC TCTG GAGCACCG CTCCAGCCGTTTGAA TERM 4616 4833086 - 4833068 - f 93 -8.1 -5.42514 | opp_overlap 4833068, overlap 4833061 GCAGAAACGAAAAAA GCCACCC GATAT AGGTGGC TTCATTCTAAATGGG TERM 4617 4833406 - 4833420 + F 73 -10 -2.75294 | overlap 4833405 GTAGGTAAATGGTCA GGAAGG TTT CCTTCC GTTTAAGCCATTTAG TERM 4618 4834587 - 4834598 + F 72 -4.4 -4.7254 | overlap 4834584 CATCTTTCGATTTAG CACA GTGC TGTG TTTTTAATAAACAGT TERM 4619 4835090 - 4835108 + F 79 -10.3 -3.54743 | overlap 4835083 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTCATG TERM 4620 4835885 - 4835897 + F 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 4621 4836625 - 4836585 - f 100 -12.1 -5.02074 | opp_overlap 4836584 4836618 GTAGGGTTTAAAAAA CCCTAATCAATAAATACTG AAT CAGTACACATTGATTAAGG CTAATCTTTTCTACT TERM 4622 4839277 - 4839287 + G 72 -5.4 -4.51699 | TTCTCGTCCCCATCA TTGG TAG CCAA TTTTCTGGTACTTCT Patl_4015 4839129 - 4839584 + | RNA-binding region RNP-1 TERM 4623 4839607 - 4839642 + T 100 -12.8 -4.14739 | opp_overlap 4839616, overlap 4839616 CTATAATACGTAGAT AATAAAAAAGCCGATG CATG CATCGGCTTTTTTGTG TTTTAACGTAACTGA TERM 4624 4839616 - 4839633 + T 100 -11.3 -5.63645 | opp_overlap 4839616, overlap 4839607 GTAGATAATAAAAAA GCCGATG CATG CATCGGC TTTTTTGTGTTTTAA TERM 4625 4839633 - 4839616 - T 100 -11.3 -5.60689 | opp_overlap 4839607 4839616 GTAGATAATAAAAAA GCCGATG CATG CATCGGC TTTTTTGTGTTTTAA Patl_4016 4840858 - 4839668 - | aromatic amino acid aminotransferase Patl_4017 4841709 - 4840942 - | hypothetical protein Patl_4018 4842721 - 4841735 - | FHA domain-containing protein Patl_4019 4844049 - 4842712 - | peptidase S1 and S6, chymotrypsin/Hap Patl_4020 4844094 - 4844726 + | phospholipid/glycerol acyltransferase TERM 4626 4845373 - 4845392 + G 70 -10 -3.10611 | overlap 4845372 4845375 CGCTAATGTGCTGGG CGGTGTCG TTGT CGACACTG GTTTATTCGACTGGA Patl_4021 4844723 - 4845964 + | hypothetical protein TERM 4627 4846037 - 4846001 - T 76 -7.3 -4.29106 | opp_overlap 4846004, overlap 4846002 4846004 GGTGAGATGAATAAA TGACGAGTTGAACATAG CGA CCTTGTTCAACTCGTTT ACGGTACTCGGATTT TERM 4628 4846036 - 4846002 - T 79 -10.8 -3.16982 | opp_overlap 4846004, overlap 4846001 4846004 GTGAGATGAATAAAT GACGAGTTGAACATAG CGA CCTTGTTCAACTCGTT TACGGTACTCGGATT TERM 4629 4846004 - 4846034 + T 89 -12.1 -3.62096 | gap 1, opp_overlap 4846004 4846002 4846001 GAGATGAATAAATGA CGAGTTGAACATAG CGAC CT-TGTTCAACTCG TTTACGGTACTCGGA TERM 4630 4846034 - 4846004 - T 91 -13.4 -3.14013 | opp_overlap 4846004, overlap 4846002 4846001 GAGATGAATAAATGA CGAGTTGAACATAG CGA CCTTGTTCAACTCG TTTACGGTACTCGGA Patl_4022 4846452 - 4846057 - | OsmC-like protein TERM 4631 4846377 - 4846388 + g 73 -4.4 -4.84527 | GACTGCCATCACCGT CCAT TTCG ATGG TTTTTCCTGTGTCAG Patl_4023 4847321 - 4846488 - | hypothetical protein TERM 4632 4846556 - 4846546 - G 74 -8.2 -3.85698 | opp_overlap 4846546 4846545 TTTTGCTTGTATAAA GCGC CTA GCGC CTTCTTGTATACATT Patl_4024 4847494 - 4848351 + | aminotransferase, class IV Patl_4025 4848361 - 4849488 + | alanine racemase Patl_4026 4850474 - 4849503 - | putative methyltransferase TERM 4633 4849599 - 4849585 - G 72 -5 -4.63218 | overlap 4849594 TTCGGGTCAAGAAAA TCAACC AAA GATTGA CTGTCCATCCACTGC Patl_4027 4851241 - 4850510 - | putative methyltransferase TERM 4634 4851455 - 4851476 + H 79 -10.3 -3.45768 | opp_overlap 4851454 4851458, overlap 4851458 AATCCCTTCATTAAT CAAGACTAA AGTA TTAGTCTTG TTACTTAATATTGAA Patl_4028 4851513 - 4852151 + | two component LuxR family transcriptional regulator TERM 4635 4852164 - 4852198 + T 95 -13.1 -3.64685 | opp_overlap 4852166 4852169, overlap 4852166 4852169 TAGTCCCCACCTCTA AATAACGTTAGTCAC CTTTA GTGACTAACGTTATC TTGTTCCGAACTTTT TERM 4636 4852166 - 4852196 + T 100 -15.7 -3.39556 | opp_overlap 4852166 4852169, overlap 4852164 4852169 GTCCCCACCTCTAAA TAACGTTAGTCAC CTTTA GTGACTAACGTTA TCTTGTTCCGAACTT TERM 4637 4852196 - 4852166 - T 100 -16.4 -3.57144 | opp_overlap 4852166 4852164 4852169, overlap 4852169 GTCCCCACCTCTAAA TAACGTTAGTCACC TTT AGTGACTAACGTTA TCTTGTTCCGAACTT TERM 4638 4852169 - 4852193 + T 100 -13 -3.83318 | opp_overlap 4852166 4852169, overlap 4852166 4852164 CCCACCTCTAAATAA CGTTAGTCAC CTTTA GTGACTAACG TTATCTTGTTCCGAA TERM 4639 4852193 - 4852169 - T 100 -13.7 -3.92542 | opp_overlap 4852169 4852166 4852164, overlap 4852166 CCCACCTCTAAATAA CGTTAGTCACC TTT AGTGACTAACG TTATCTTGTTCCGAA Patl_4029 4853727 - 4852228 - | putative CheA signal transduction histidine kinases Patl_4030 4853810 - 4854907 + | tRNA (uracil-5-)-methyltransferase Patl_4031 4855503 - 4854904 - | DNA-binding transcriptional repressor FabR TERM 4640 4855996 - 4856007 + G 72 -5.8 -4.4261 | overlap 4855997 AAAGACCCGTATTCG GCCA AGCG TGGC TTTTGGTATTCACAC Patl_4032 4855663 - 4856790 + | stearoyl-CoA 9-desaturase TERM 4641 4856800 - 4856815 + T 93 -8.2 -5.39721 | opp_overlap 4856800 GCTTAGTATTCTAAA GCTCCC ACAA GGGGGC TTTTTTGTATGATAG TERM 4642 4856888 - 4856876 - T 78 -4.1 -5.2189 | TGAAGTATTAAAAAA TTGAC TTA GCCAA ACAGTAAGTTAAGGG TERM 4643 4856950 - 4856911 - T 73 -5.9 -4.62471 | gap 1, opp_overlap 4856916 4856940, overlap 4856914 4856915 GTTAAGGGCTAAAAA TAACCGTTCAATGT-GAG CTTAT CCCTACATTGAACGATTC AGGTATTTGGTTAAC TERM 4644 4856947 - 4856914 - T 78 -7.6 -4.42235 | gap 1, opp_overlap 4856916 4856940, overlap 4856911 4856915 AAGGGCTAAAAATAA CCGTTCAATGT-GAG CTTAT CCCTACATTGAACGA TTCAGGTATTTGGTT TERM 4645 4856946 - 4856915 - T 70 -8.9 -3.24256 | gap 1, opp_overlap 4856916 4856940, overlap 4856914 4856911 AGGGCTAAAAATAAC CGTTCAATGT-GAG CTTAT CCCTACATTGAACG ATTCAGGTATTTGGT Patl_4033 4857306 - 4856980 - | hypothetical protein TERM 4646 4857672 - 4857682 + G 82 -6.8 -4.81212 | ACAATATTGCAATTC TGCC GAT GGCA TTTTGTTATCCTGGA TERM 4647 4857876 - 4857857 - g 70 -5 -4.50358 | overlap 4857859 ACGGAAAGAGTAAAA GATTGGCA GGCG TACCAACC AAGGTTTTTCGTTTT Patl_4034 4857485 - 4857994 + | uracil-DNA glycosylase superfamily protein Patl_4035 4860238 - 4857998 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase TERM 4648 4858946 - 4858917 - G 74 -3.5 -4.94992 | gap 1, overlap 4858922 4858924 TTAAACCGACAAAAA CCAAATGCC-GCGC TCA GCGGTAGCATATGG TCGCCAGCCTCAAAT Patl_4036 4860416 - 4861315 + | hypothetical protein Patl_4037 4862082 - 4861312 - | phosphoadenosine phosphosulfate reductase TERM 4649 4861465 - 4861479 + g 72 -6.4 -4.21908 | opp_overlap 4861465 CCATAACGGATGATA GGGCAT GTC ATGCTC TTTTAAGTAATAGTG Patl_4038 4863784 - 4862075 - | sulfite reductase subunit beta TERM 4650 4863224 - 4863237 + g 76 -8.1 -4.09864 | ATCAAGCCATATTTC CGCGT AAGC ACGCG TTTTAGGCAGTAAAT TERM 4651 4863721 - 4863733 + g 70 -9.1 -3.44146 | GTAAAAAATTGCTTT CGCCT TTA AGGCG TTCGTTGTCGGCAAG Patl_4039 4865616 - 4863784 - | sulfite reductase (NADPH) flavoprotein, alpha chain Patl_4040 4866506 - 4865748 - | hypothetical protein Patl_4041 4867496 - 4866510 - | hypothetical protein TERM 4652 4866913 - 4866928 + g 75 -3.2 -5.11937 | ACACTTAATTTTTGT GACAAG TTGC CTAGTC TTTTTTCAACTTGTT TERM 4653 4867464 - 4867446 - G 79 -4.6 -5.25735 | overlap 4867448 4867451 CCAAAAAATTAAAAA CAGTATTG CTG CAATACTC AGCAACCATTTTGGG TERM 4654 4867462 - 4867448 - G 74 -7.2 -4.22041 | overlap 4867446 4867451 AAAAAATTAAAAACA GTATTG CTG CAATAC TCAGCAACCATTTTG Patl_4042 4867949 - 4867506 - | hypothetical protein TERM 4655 4867722 - 4867742 + g 76 -7.7 -4.2757 | overlap 4867717 4867723 ACGCATGACTTCACC TTGCATAAT GTG ATTATGCAG TTCTATTTTTTTAGC Patl_4043 4868544 - 4868065 - | hypothetical protein TERM 4656 4868703 - 4868717 + r 85 -5.7 -5.28414 | TGCGACTTTTTTTCG CAGCT CAGCA AGCTG TTTTTCTATTTCTTC Patl_4044 4869344 - 4868685 - | phage shock protein A, PspA Patl_4045 4869696 - 4869989 + | hypothetical protein Patl_4046 4869994 - 4870689 + | short-chain dehydrogenase/reductase SDR Patl_4047 4870686 - 4872029 + | AMP-dependent synthetase and ligase Patl_4048 4872077 - 4872721 + | acetyltransferase TERM 4657 4872793 - 4872804 + G 76 -4.4 -5.00616 | GGCATGTTCCTCATT GTGT TCGG ACAC TTTTTTGGCGACCCG Patl_4049 4872739 - 4873791 + | hypothetical protein Patl_4050 4874259 - 4873981 - | hypothetical protein TERM 4658 4874113 - 4874123 + g 72 -5.4 -4.5464 | opp_overlap 4874113 TTCTTGAATACCATA CTGA AGT TCAG TTTTAGTTGTCTCTA Patl_4051 4875510 - 4874473 - | tRNA-dihydrouridine synthase A TERM 4659 4875557 - 4875547 - R 71 -6.8 -3.99775 | opp_overlap 4875547, overlap 4875537 ATTTATTAATAACAA CCAG TCA CTGG TAATTATCAATATGC TERM 4660 4875676 - 4875658 - R 86 -8.1 -4.93296 | opp_overlap 4875657 TGATGATCAGAAAAA GGCCGCT TATTT AACGGCC CTTGATGACGTGAAC Patl_4052 4876260 - 4875715 - | hypothetical protein Patl_4053 4876561 - 4877115 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Patl_4054 4877298 - 4877873 + | HNH endonuclease TERM 4661 4877917 - 4877902 - f 77 -6.2 -4.53774 | opp_overlap 4877902 4877897 ACAAATTAAGCAAAA TAGTGA TACT TCACTA TTAGGTTACTTCTAC TERM 4662 4878815 - 4878767 - g 72 -9 -3.61178 | gap 1, opp_overlap 4878798 4878801, overlap 4878768 GCGACTTATTGCAAA GTGACGCGTTCGCACAAGACTAT TTTG ACAATCCCGCGC-AACGCGTCAT ATTCCAGCGCTGGCT TERM 4663 4878814 - 4878768 - g 79 -12.5 -2.76492 | gap 1, opp_overlap 4878798 4878801, overlap 4878767 CGACTTATTGCAAAG TGACGCGTTCGCACAAGACTAT TTTG ACAATCCCGCGC-AACGCGTCA TATTCCAGCGCTGGC Patl_4055 4877986 - 4878888 + | phospholipid/glycerol acyltransferase Patl_4056 4878892 - 4879788 + | phospholipid/glycerol acyltransferase TERM 4664 4880751 - 4880741 - g 83 -4 -5.28683 | ATCAAGAGCAAAAAA TTGA TAT TCAA GACTTACTAAACAGC Patl_4057 4879789 - 4881033 + | MscS mechanosensitive ion channel TERM 4665 4881106 - 4881074 - f 91 -13.6 -2.57721 | opp_overlap 4881070, overlap 4881066 4881070 TAAGGTATCAATCTA CATTGACTGTAGGT AATTA ACCTACGGTCAATG CGTATAAGAATAGTA Patl_4058 4881574 - 4882353 + | hypothetical protein TERM 4666 4883173 - 4883183 + G 71 -6.8 -4.07568 | AGCAGCTAGCGCTAA CACC ACC GGTG TTTTCAGAGGAACAA Patl_4059 4882440 - 4883291 + | dTDP-4-dehydrorhamnose reductase TERM 4667 4883319 - 4883284 - T 100 -17 -2.78816 | opp_overlap 4883285, overlap 4883292 CTAGTCCTTACGACA TGCTATAACACTCGCC AATC GGCGAGTGCTATAGCT TTTAAAGAATGAAAT TERM 4668 4883285 - 4883318 + T 100 -18.3 -4.09685 | opp_overlap 4883284 4883292 TAGTCCTTACGACAT GCTATAACACTCGCC AATC GGCGAGTGCTATAGC TTTTAAAGAATGAAA TERM 4669 4883311 - 4883292 - T 95 -13.6 -3.35438 | opp_overlap 4883285, overlap 4883284 TACGACATGCTATAA CACTCGCC AATC GGCGAGTG CTATAGCTTTTAAAG Patl_4060 4884782 - 4883361 - | sodium:neurotransmitter symporter TERM 4670 4883930 - 4883915 - G 72 -2.6 -5.01811 | gap 1 GTAGGAAAGTAAAAA TCATGCC CAC GG-ATGA ATCGCTTAAACTTTG TERM 4671 4884730 - 4884716 - G 71 -10 -3.2614 | TATTTCCGATACCAA CTGCAG AGC CTGCAG CCGCGAGAATAAAAC Patl_4061 4885684 - 4884923 - | short chain dehydrogenase/reductase family oxidoreductase TERM 4672 4885299 - 4885319 + g 87 -11.2 -3.86346 | opp_overlap 4885292 AAAAGGTATCGCAGC CACAGTGC AGGAA GCACTGTG TTTGTGGAAAAATAC Patl_4062 4886106 - 4885681 - | putative thiol-disulphide oxidoreductase DCC Patl_4063 4886275 - 4886817 + | peptide methionine sulfoxide reductase TERM 4673 4886800 - 4886812 + T 73 -7.7 -3.95986 | AAAACATTCGCCAGC CGCTT AAA AAGCG TTTAGTTGGCTTCCC Patl_4064 4887992 - 4886814 - | hypothetical protein Patl_4065 4891264 - 4888127 - | glycoside hydrolase family protein TERM 4674 4888813 - 4888825 + g 71 -7.7 -3.85698 | GTTGCCCGCCGTACT GCCAA TCT TTGGC TTTCTCAGGAAAGCC Patl_4066 4891556 - 4892017 + | hypothetical protein Patl_4067 4892146 - 4892694 + | flavodoxin FldB Patl_4068 4892691 - 4893491 + | hypothetical protein TERM 4675 4893944 - 4893968 + G 71 -7.9 -3.84772 | opp_overlap 4893937 AATAGATATGACCCC CATGTTGGACA TCG TGTTCATCATG TTGATTTTCTTCATT TERM 4676 4894271 - 4894257 - g 73 -7.8 -4.02653 | opp_overlap 4894256 4894257, overlap 4894245 AACCAAGCTAAAGAA GCTGGC ATC GCCAAC GTTTCTGTTTTAGTA Patl_4069 4893888 - 4894295 + | biopolymer transport protein ExbD/TolR TERM 4677 4894316 - 4894367 + T 100 -11.8 -4.66833 | opp_overlap 4894326 4894327 4894334, overlap 4894334 TCGTTACTAACGACT GCATCAAATACGAAAAAAGCCATC ATAT GATGGCTTTTTTTATGTCTGTTGC TTTTTAAACTTGCAG TERM 4678 4894357 - 4894326 - T 77 -9.6 -3.4582 | opp_overlap 4894316 4894334, overlap 4894327 4894334 CGACTGCATCAAATA CGAAAAAAGCCATC ATAT GATGGCTTTTTTTA TGTCTGTTGCTTTTT TERM 4679 4894356 - 4894327 - T 76 -10.9 -2.67171 | opp_overlap 4894316 4894334, overlap 4894326 4894334 GACTGCATCAAATAC GAAAAAAGCCATC ATAT GATGGCTTTTTTT ATGTCTGTTGCTTTT TERM 4680 4894334 - 4894349 + T 100 -9 -5.77988 | opp_overlap 4894327 4894326 4894334, overlap 4894316 TCAAATACGAAAAAA GCCATC ATAT GATGGC TTTTTTTATGTCTGT TERM 4681 4894349 - 4894334 - T 93 -9 -5.32699 | opp_overlap 4894334 4894316, overlap 4894327 4894326 TCAAATACGAAAAAA GCCATC ATAT GATGGC TTTTTTTATGTCTGT Patl_4070 4894941 - 4894456 - | ribonuclease activity regulator protein RraA Patl_4071 4895148 - 4895657 + | phosphoesterase, PA-phosphatase related Patl_4072 4895741 - 4896817 + | hypothetical protein Patl_4073 4897152 - 4898399 + | diaminopimelate decarboxylase Patl_4074 4898586 - 4899416 + | diaminopimelate epimerase TERM 4682 4899451 - 4899441 - g 75 -3.2 -5.14563 | CTGGTCAGCAAAAAA GTCC ATT AGAC GACACCTCTTCCTTT Patl_4075 4899413 - 4900111 + | hypothetical protein Patl_4076 4900127 - 4901023 + | phage integrase Patl_4077 4901071 - 4901787 + | HAD family hydrolase TERM 4683 4901859 - 4901826 - T 72 -8.9 -3.41024 | gap 1, opp_overlap 4901835 4901837 4901838, overlap 4901824 4901838 TGCGTCAACACAATA CTCGCTCGATAACGGC AAC GCC-TCATCAGGCGAG TTGCCGATTAATCTT Patl_4078 4902663 - 4901884 - | serine O-acetyltransferase TERM 4684 4902303 - 4902289 - G 74 -7.1 -4.20367 | GCTTTGAATAAACAA CGCCA ATTCA TGGCG GCCCATTAACCACAA TERM 4685 4902783 - 4902761 - H 71 -4.2 -4.87786 | opp_overlap 4902763, overlap 4902763 TTAATTGTATAAAAA CACAGTATAA CTG TTATAATGCG TTCATAATTCTACAG TERM 4686 4904302 - 4904272 - g 78 -5.5 -4.7373 | overlap 4904273 TCACGTCATCAAAAA TTCTGGTTTGTAC GCCAT GTACAAAGCAGAG AAAGGCGAAAAAGCC TERM 4687 4904301 - 4904273 - g 70 -9 -3.43756 | overlap 4904272 CACGTCATCAAAAAT TCTGGTTTGTAC GCCAT GTACAAAGCAGA GAAAGGCGAAAAAGC Patl_4079 4902812 - 4904986 + | DNA helicase II Patl_4080 4905076 - 4906332 + | diguanylate cyclase Patl_4081 4907272 - 4906352 - | transporter DMT superfamily protein Patl_4082 4907430 - 4907687 + | hypothetical protein Patl_4083 4908063 - 4908635 + | hypothetical protein TERM 4688 4908855 - 4908841 - g 74 -5.6 -4.65838 | GACATACTTGAAAAA GCCATC GAT GAAGGC GTTGAGCAGTTAGCT Patl_4084 4908649 - 4909572 + | formate/nitrite transporter Patl_4085 4910055 - 4909660 - | hypothetical protein Patl_4086 4910437 - 4910877 + | hemerythrin HHE cation binding region Patl_4087 4910906 - 4911487 + | redoxin TERM 4689 4911566 - 4911537 - f 90 -12.3 -3.53811 | opp_overlap 4911536 4911535 GCTACTTTCCTTAAA CGCACTTTGCT TTCAACGT AGCAAAGTGCG GGTTTAGGGCGAGTA TERM 4690 4913306 - 4913290 - g 71 -9.5 -3.18776 | overlap 4913288 TGAAACCTATCAAGA CGATGAA TTA TTCATCG AGGTAAACCCTGCAT Patl_4088 4911731 - 4913353 + | hypothetical protein TERM 4691 4913487 - 4913520 + F 100 -13.3 -4.32482 | opp_overlap 4913494, overlap 4913488 ACTTTCGCGGTAAAG TGAAAAAGGGAAAGC CAGC GCTTTCCCTTTGTCG TTTTGGCTTATCCAT TERM 4692 4913488 - 4913519 + F 100 -14.6 -3.18766 | opp_overlap 4913494, overlap 4913487 CTTTCGCGGTAAAGT GAAAAAGGGAAAGC CAGC GCTTTCCCTTTGTC GTTTTGGCTTATCCA TERM 4693 4913513 - 4913494 - f 100 -12.2 -4.81249 | opp_overlap 4913488 4913487 CGGTAAAGTGAAAAA GGGAAAGC CAGC GCTTTCCC TTTGTCGTTTTGGCT Patl_4089 4913734 - 4914279 + | hypothetical protein TERM 4694 4914325 - 4914346 + F 100 -14.5 -5.79595 | CAGTGCGTTCCCTTT GCGAGTACC TTGT GGTACTCGC TTTTTTCTTTTAACC TERM 4695 4914746 - 4914735 - g 74 -5.8 -4.60143 | opp_overlap 4914735, overlap 4914728 AGACATGACAGAAAA CCTG ATTG CAGG TATTGCAATGGGAAT Patl_4090 4914379 - 4915428 + | MscS mechanosensitive ion channel TERM 4696 4915469 - 4915495 + F 93 -10.9 -4.98531 | opp_overlap 4915469 TCTCTATCAATTAAA GGCACGTTAGC ATAAC GCTAAAGTGCC TTTTTCATTTCAGGG TERM 4697 4915495 - 4915469 - f 90 -11.6 -3.95584 | opp_overlap 4915469 TCTCTATCAATTAAA GGCACGTTAGCA TAA CGCTAAAGTGCC TTTTTCATTTCAGGG Patl_4091 4915875 - 4916318 + | hypothetical protein TERM 4698 4916400 - 4916342 - T 100 -36.6 -3.53012 | opp_overlap 4916343 4916358, overlap 4916343 4916345 4916358 CCTTGCTGTTTTAAA TTAGCAGCCATAAAAATACCCCAGCATC CTT GATGCTGGGGTATTTTTATGGCTGCTAT TTGTGGTCTGCAGTA TERM 4699 4916343 - 4916399 + T 100 -40.1 -4.01888 | opp_overlap 4916342 4916343 4916345 4916358, overlap 4916358 CTTGCTGTTTTAAAT TAGCAGCCATAAAAATACCCCAGCATC CTT GATGCTGGGGTATTTTTATGGCTGCTA TTTGTGGTCTGCAGT TERM 4700 4916399 - 4916343 - T 100 -40.1 -2.71712 | opp_overlap 4916343 4916358, overlap 4916342 4916345 4916358 CTTGCTGTTTTAAAT TAGCAGCCATAAAAATACCCCAGCATC CTT GATGCTGGGGTATTTTTATGGCTGCTA TTTGTGGTCTGCAGT TERM 4701 4916397 - 4916345 - T 100 -38.3 -2.90496 | opp_overlap 4916343 4916358, overlap 4916343 4916342 4916358 TGCTGTTTTAAATTA GCAGCCATAAAAATACCCCAGCATC CTT GATGCTGGGGTATTTTTATGGCTGC TATTTGTGGTCTGCA TERM 4702 4916358 - 4916384 + T 100 -19.6 -4.88736 | opp_overlap 4916358 4916345 4916343 4916342, overlap 4916343 TAGCAGCCATAAAAA TACCCCAGCATC CTT GATGCTGGGGTA TTTTTATGGCTGCTA TERM 4703 4916384 - 4916358 - T 100 -19.6 -4.88736 | opp_overlap 4916343 4916358, overlap 4916345 4916343 4916342 TAGCAGCCATAAAAA TACCCCAGCATC CTT GATGCTGGGGTA TTTTTATGGCTGCTA Patl_4092 4916842 - 4916543 - | hypothetical protein Patl_4093 4918118 - 4917027 - | hypothetical protein Patl_4094 4918214 - 4918546 + | diguanylate cyclase Patl_4095 4919042 - 4918626 - | hypothetical protein TERM 4704 4920748 - 4920731 - g 70 -4.9 -4.39426 | TATAGCCTTAGAAAA TTGGTAC AAAG ATACCAA GCTGGGCGATTATGT Patl_4096 4919598 - 4921205 + | DNA-cytosine methyltransferase Patl_4097 4923176 - 4921386 - | hypothetical protein Patl_4098 4924622 - 4923198 - | hypothetical protein Patl_4099 4926595 - 4924775 - | NERD domain-contain protein TERM 4705 4926322 - 4926334 + g 72 -2.6 -5.06414 | CGTTTTTTTCCCGAT CGGG CTTTC CTCG TTTTTCTTGCACCCA Patl_4100 4928490 - 4926595 - | hypothetical protein Patl_4101 4931753 - 4928538 - | helicase-like TERM 4706 4929148 - 4929159 + g 72 -3 -5.08824 | CTGGATGCCTGAATG TACT CAGC AGTA TTTTTTGGCTGGCCG TERM 4707 4929634 - 4929624 - G 72 -3.2 -4.9792 | opp_overlap 4929631, overlap 4929631 CACCTGATAGAAAAA CGAA TCA CTCG CGCTGATACCACTGG TERM 4708 4929670 - 4929680 + g 74 -5.4 -4.69053 | AACTGGGCGAGCTTT CTGT TGA ACAG TTTTCTTACATGCTC TERM 4709 4930982 - 4930998 + g 77 -10.9 -3.14051 | overlap 4930980 AGATACTTTTAACTT CACTGAC AGT GTCAGTG TCTTCGTCCCACTGA Patl_4102 4934045 - 4931760 - | superfamily I DNA/RNA helicase-like protein TERM 4710 4931933 - 4931946 + g 76 -2.3 -5.43553 | CATCTCCGTAGGCAG CAACC CACT GGTCG TTTTCTTTTTTAAGT Patl_4103 4936227 - 4934467 - | methyltransferase type 12 TERM 4711 4934538 - 4934548 + g 72 -5.4 -4.4009 | opp_overlap 4934538 CTTCAAATAAATCAT CGAT AGA ATCG TTTTGTGCACTGAGC TERM 4712 4934586 - 4934601 + g 71 -3.9 -4.87291 | ATGCGATATTGGCTT CGGCG AAAAAG CGCTG TTTTTGGTTAGAATC TERM 4713 4935321 - 4935335 + g 74 -5.6 -4.7268 | opp_overlap 4935322, overlap 4935322 CGTTGTCTTTTATAA ACCCCA TAT TGGGGC TTTTATTCGGTGTTT TERM 4714 4935334 - 4935322 - G 77 -9.1 -3.85698 | opp_overlap 4935321 4935322 GTTGTCTTTTATAAA CCCCA TAT TGGGG CTTTTATTCGGTGTT TERM 4715 4935322 - 4935334 + g 70 -9.1 -3.41981 | opp_overlap 4935322, overlap 4935321 GTTGTCTTTTATAAA CCCCA TAT TGGGG CTTTTATTCGGTGTT TERM 4716 4935405 - 4935377 - G 76 -9 -3.767 | overlap 4935378 TAGTGATCGATTAAA TCTTTGTATTGG TGTAT CCAATACAAAGC CACCAAGCCCAATGG TERM 4717 4935404 - 4935378 - G 79 -12.5 -2.85699 | overlap 4935377 AGTGATCGATTAAAT CTTTGTATTGG TGTAT CCAATACAAAG CCACCAAGCCCAATG TERM 4718 4935630 - 4935642 + g 88 -5.5 -5.55769 | overlap 4935629 AGTAAACACCTTCAC GACCG AGT TGGTC TTTTTTGTTCTGCGA TERM 4719 4936582 - 4936560 - H 77 -6.1 -4.48741 | GAACGTAGTACAAAA CCCGCTGGG GAATT CCCTTCGGG CGAATTTTAAAAGGA TERM 4720 4937371 - 4937381 + G 74 -6.8 -4.29953 | CTTTTTGTGTGTAAT GTGG TGC CCAC TTCTTTTAATCGTTT Patl_4104 4936717 - 4937601 + | hypothetical protein Patl_4105 4938391 - 4937651 - | hypothetical protein Patl_4106 4938883 - 4940073 + | hypothetical protein Patl_4107 4940073 - 4940492 + | hypothetical protein Patl_4108 4940699 - 4941898 + | hypothetical protein Patl_4109 4941898 - 4942317 + | hypothetical protein Patl_4110 4942583 - 4943782 + | hypothetical protein Patl_4111 4943779 - 4944198 + | hypothetical protein Patl_4112 4944296 - 4945498 + | hypothetical protein Patl_4113 4945498 - 4945914 + | hypothetical protein TERM 4721 4945950 - 4945940 - T 78 -4 -5.24989 | GTAGACAGCAAAAAA TTAG ACG CTAA GCATTTCAAGTAAGC Patl_4114 4947985 - 4945940 - | diguanylate cyclase/phosphodiesterase TERM 4722 4947204 - 4947220 + g 81 -3.6 -5.40014 | AAGCCATCAAAATTT GCCAAG CGCTC CATGGC TTTTTGTTGTTCTTT TERM 4723 4949128 - 4949138 + G 79 -8.2 -4.35524 | opp_overlap 4949127, overlap 4949136 CGCTTAGGAAACATT GGCG GCT CGCC TTTTCAGTTTAAAGG Patl_4115 4948630 - 4950048 + | hypothetical protein TERM 4724 4950186 - 4950212 + G 95 -13 -3.86015 | opp_overlap 4950180 4950185 4950183 TAACCAAAACCACAT GTGCGGCGCTTA GCA TGAGCGCAGCAC TTTCTACAAGCACTG TERM 4725 4951131 - 4951121 - g 79 -4.6 -5.2189 | TCAAGCAGCAAAAAA GCCG ATG CAGC GCAAAAGTTCATTAG TERM 4726 4951480 - 4951439 - g 71 -9.6 -3.17941 | gap 3 ATGACAGTTGATCAA GCGC-TGGCTAACGCTCAACG ACT CGTTGAACGC--GCCATGCGC AAGGCTCGCTACCCA Patl_4116 4950158 - 4951501 + | extracellular solute-binding protein TERM 4727 4951511 - 4951542 + F 90 -8.7 -4.88407 | overlap 4951512 AAATAGCGTTTTGCT TGGGGTAGGCGCA ATGTGC TGTGCTTACCCCC TTTTTAATTCAGTAA TERM 4728 4951512 - 4951541 + F 89 -12.2 -3.52321 | overlap 4951511 AATAGCGTTTTGCTT GGGGTAGGCGCA ATGTGC TGTGCTTACCCC CTTTTTAATTCAGTA Patl_4117 4951570 - 4952442 + | binding-protein-dependent transport systems inner membrane component TERM 4729 4953148 - 4953158 + G 76 -8.2 -4.17048 | TTGCCAGCTACTCGA GCCC AGA GGGC TTATTTTACGCCAAA Patl_4118 4952445 - 4953275 + | binding-protein-dependent transport systems inner membrane component Patl_4119 4953286 - 4954302 + | ABC transporter related TERM 4730 4954355 - 4954321 - f 72 -9.5 -3.01497 | gap 1 CCATTTCAAACTATA TGCGGCTATCGATACA CTAG TGCATCGATAGCCA-A CGGCCGCTAATTACC Patl_4120 4954583 - 4955296 + | HAD family hydrolase TERM 4731 4955911 - 4955868 - g 83 -4.6 -5.37593 | gap 1, overlap 4955869 CGTTAAAGCAAAAAA TCAGTTACATGCCATGCCGCA CAT CGCG-CAAAACATGCAACTGG CTCAACAGGCTGACG TERM 4732 4955910 - 4955869 - g 72 -8.1 -3.81472 | gap 1, overlap 4955868 GTTAAAGCAAAAAAT CAGTTACATGCCATGCCGCA CAT CGCG-CAAAACATGCAACTG GCTCAACAGGCTGAC TERM 4733 4956097 - 4956112 + G 72 -8.2 -3.81447 | GCTATCAACCAACGT GTGGCG AGTA CGCCGC TTATTGTCGGCTCTG Patl_4121 4955299 - 4956258 + | DeoR family transcriptional regulator TERM 4734 4956303 - 4956330 + T 79 -11.4 -2.68381 | opp_overlap 4956309, overlap 4956309 AATAACGCGGACACG AAAAAAGGGACC ATTT GGTCCCTTTTTG ATGTTTGATACCTTA TERM 4735 4956309 - 4956324 + T 93 -10.4 -4.946 | opp_overlap 4956309, overlap 4956303 GCGGACACGAAAAAA GGGACC ATTT GGTCCC TTTTTGATGTTTGAT TERM 4736 4956324 - 4956309 - T 100 -10.4 -5.21709 | opp_overlap 4956309 4956303 GCGGACACGAAAAAA GGGACC ATTT GGTCCC TTTTTGATGTTTGAT Patl_4122 4957321 - 4956359 - | PfkB TERM 4737 4957212 - 4957228 + g 88 -7.9 -5.07053 | opp_overlap 4957199, overlap 4957213 CAGGCAGCCACATTG GCCGGTG CCC CACCGGA TTTTTTCACGTAATT TERM 4738 4957213 - 4957227 + g 82 -11.4 -3.63148 | opp_overlap 4957199, overlap 4957212 AGGCAGCCACATTGG CCGGTG CCC CACCGG ATTTTTTCACGTAAT Patl_4123 4958506 - 4957892 - | TetR family transcriptional regulator TERM 4739 4958288 - 4958277 - G 74 -3.6 -5.00616 | overlap 4958262 GCGGGTTTGAAAAAA CCAC AAGG GCGG CTTTCATAAAATTCG Patl_4124 4958925