TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.420596 %AT, 1769423 nt, 14039 terms. Intergenic: 0.486722 %AT, H2T: 159031 nt, 1078 terms; T2T: 62648 nt, 829 terms; H2H: 63284 nt, 930 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|126458628|ref|NC_009073.1| Pyrobaculum calidifontis JCM 11548, complete genome (length 2009313) TERM 1 282 - 303 + G 75 -10.3 -3.75461 | opp_overlap 281 ATTCAGATAGGAGAT CTCTACTTT GTCA AAAGTAGAG TTTAGTAAAACTTTC Pcal_0001 9 - 308 + | hypothetical protein cdc6 379 - 1551 + | cell division control protein 6 Pcal_0003 1548 - 1835 + | regulatory protein, ArsR TERM 2 1829 - 1839 + T 86 -4 -5.38047 | opp_overlap 1829 TTATAAAGATACAAC TCTA TAG TAGA TTTTTTATGTCAATG Pcal_0004 3095 - 1830 - | replication factor C large subunit TERM 3 2073 - 2085 + g 75 -4.1 -4.74103 | TCTAATAAACGGCGG TAGGC GAG GCTTA TTTTTGACTTGAGAA rfc 4075 - 3095 - | replication factor C small subunit Pcal_0006 4777 - 4106 - | 30S ribosomal protein S7P Pcal_0007 5014 - 4799 - | hypothetical protein Pcal_0008 5307 - 5083 - | regulatory protein, Crp Pcal_0009 5727 - 5329 - | hypothetical protein Pcal_0010 6618 - 5845 - | putative circadian clock protein, KaiC Pcal_0011 7044 - 6661 - | cytidine deaminase Pcal_0012 7057 - 8004 + | hypothetical protein Pcal_0013 8023 - 8805 + | short-chain dehydrogenase/reductase SDR glyA 10094 - 8802 - | serine hydroxymethyltransferase TERM 4 9201 - 9228 + g 71 -7.7 -4.09243 | overlap 9202 CGTGACGCCCTCCTC GGCCAAGGCCT CAGCCA AGGCTTTGGCG TTTTCCACAACTCTG Pcal_0015 10853 - 10125 - | molybdenum cofactor biosynthesis protein (moaC) Pcal_0016 11146 - 10850 - | hypothetical protein TERM 5 11085 - 11110 + g 74 -2.5 -5.00616 | gap 1, overlap 11085 11084 CACGTCAAGTCCGCT TG-AGGCAGAGG CCA CCTATGCCCACA TTTTTTACACACAAA Pcal_0017 12267 - 11209 - | isopentenyl pyrophosphate isomerase rpl2p 13001 - 12267 - | 50S ribosomal protein L2P TERM 6 12347 - 12330 - G 71 -6.9 -4.20783 | opp_overlap 12339 ACGCGAGCCAATAAA CCCGACC TTCT GGCCAGG CGGCGCGGTCTTTGG rps17E 13328 - 13543 + | 30S ribosomal protein S17e TERM 7 13537 - 13525 - f 70 -4.8 -4.5852 | GAAGGCAAAGGAAAA GGCT GAGCA AGCC GCGTAGCTATGCCTC Pcal_0020 13546 - 14235 + | peptidylprolyl isomerase, FKBP-type Pcal_0021 14264 - 14869 + | proteasome endopeptidase complex Pcal_0022 14872 - 16107 + | enolase Pcal_0023 16157 - 16564 + | ModE family transcriptional regulator Pcal_0024 17740 - 16811 - | GTP cyclohydrolase subunit MoaA Pcal_0025 18142 - 19248 + | protein kinase Pcal_0026 19286 - 19735 + | FHA domain-containing protein rps2P 19769 - 20395 + | 30S ribosomal protein S2 Pcal_0028 20428 - 21273 + | hypothetical protein Pcal_0029 22623 - 21253 - | pyruvate kinase Pcal_0030 24529 - 22625 - | beta-lactamase domain-containing protein TERM 8 23305 - 23349 + g 71 -12.2 -2.88427 | gap 1, opp_overlap 23315 TCTCCTGCCCTCTCC CAGTG-CTAAAGGCGGGAATG AGGA CCTTCCCGCCCTTAGCCACAG TCTCTGCGACGTGTT TERM 9 23338 - 23315 - G 77 -12.4 -3.57144 | opp_overlap 23305 TCTCCCAGTGCTAAA GGCGGGAATG AGGA CCTTCCCGCC CTTAGCCACAGTCTC TERM 10 24797 - 24762 - R 70 -9.8 -3.2614 | overlap 24763 24766 TACGCCGTAGACTAA TTCACCGACCTACCTA GTTA TAAGTAGGTCGACGAT AAAATGTTCATCCTT TERM 11 24796 - 24763 - R 81 -13.3 -2.5547 | overlap 24762 24766 ACGCCGTAGACTAAT TCACCGACCTACCTA GTTA TAAGTAGGTCGACGA TAAAATGTTCATCCT TERM 12 24793 - 24766 - R 73 -11.4 -2.58714 | overlap 24763 24762 CCGTAGACTAATTCA CCGACCTACCTA GTTA TAAGTAGGTCGA CGATAAAATGTTCAT Pcal_0031 26233 - 24812 - | cysteinyl-tRNA synthetase Pcal_0032 29927 - 26406 - | hypothetical protein TERM 13 29645 - 29631 - G 70 -4.2 -4.57569 | overlap 29633 29634 GTAGTTGGCCAAAAA GACGTG CCC CACTTC GTGAAACACAAGCCT TERM 14 30795 - 30780 - g 80 -2.5 -5.24129 | overlap 30781 30782 GCTGTGGATAAAAAA CGTGG GCAACG CCACA GCCAAACTCTCCATA Pcal_0033 29959 - 31899 + | hypothetical protein TERM 15 32612 - 32602 - g 72 -5.4 -4.52897 | ACAAGTAACAATAAA TGGT ACC ACCA TAACGCTTGAGGACT TERM 16 34618 - 34573 - g 80 -10.5 -3.94634 | gap 1, opp_overlap 34576, overlap 34576 CAGTATCTCAAATAA GGACGGCTACGCCTATGAGC CAAATGT GCCCATAGGCGT-GCCGTTT AGAGTGCAAGTCCGC TERM 17 34576 - 34615 + G 88 -14.4 -3.60296 | gap 1, opp_overlap 34573 34576 TATCTCAAATAAGGA CGGCTACGCCTATGAGC CAAATGT GCCCATAGGCGT-GCCG TTTAGAGTGCAAGTC TERM 18 34615 - 34576 - g 89 -16.6 -3.03085 | gap 1, opp_overlap 34576, overlap 34573 TATCTCAAATAAGGA CGGCTACGCCTATGAGC CAAATGT GCCCATAGGCGT-GCCG TTTAGAGTGCAAGTC Pcal_0034 31940 - 39925 + | hypothetical protein Pcal_0035 39984 - 40568 + | AMMECR1 domain-containing protein Pcal_0036 40597 - 41397 + | hypothetical protein Pcal_0037 41378 - 41908 + | adenylate cyclase Pcal_0038 42929 - 42120 - | hypothetical protein Pcal_0039 44709 - 42958 - | ATP-dependent DNA ligase Pcal_0040 45293 - 44748 - | hypothetical protein TERM 19 45394 - 45372 - g 72 -6.2 -4.34402 | overlap 45373 CGGCGTAGACGAAAA CGTGGAGGCC TTT GACCTCTACA CCGGGGGCGGGGGCT TERM 20 46143 - 46179 + G 83 -7.7 -4.63184 | opp_overlap 46128, overlap 46177 GGTGACGAGGCCAGG CGCCCGCTCCTCACCGC GCC GCTGGGAGGTGGTGGCG TTTTTAGAATCGCTT Pcal_0041 45295 - 46209 + | ribokinase-like domain-containing protein Pcal_0042 46232 - 46564 + | hypothetical protein Pcal_0043 46655 - 47338 + | nucleotidyl transferase Pcal_0044 47383 - 48105 + | hypothetical protein Pcal_0045 48102 - 48638 + | hypothetical protein TERM 21 48661 - 48642 - T 85 -11.4 -3.61894 | AACCTCCTCTAACAA GGCGTGAC GTAG GCCACGCC GTCGCGCACTTCCAC Pcal_0046 48997 - 48635 - | hypothetical protein TERM 22 48896 - 48869 - G 71 -10.4 -3.57561 | overlap 48870 GGCCAAGGCGGCAAA GGGCGCCGCCAC CGCT GCGGCGGCCCAC AACGGAATTACGCCG TERM 23 49093 - 49067 - g 86 -12.2 -4.07568 | opp_overlap 49048 49089, overlap 49068 GCGGCGCTTGTAAAA GGCCCCGCAGAG GTC CTCTGCGCGGGC AAATGCGCCGTGTTC TERM 24 49093 - 49068 - g 85 -15.5 -3.04398 | gap 1, opp_overlap 49048 49089, overlap 49067 CGGCGCTTGTAAAAG GCCC-CGCAGAG GTC CTCTGCGCGGGC AAATGCGCCGTGTTC TERM 25 49469 - 49453 - g 77 -12.3 -3.54424 | GCTCAGCCCCTTAAA CGCCTAC TAC GTAGGCG CCGCGAATCTACAGG Pcal_0047 49022 - 50083 + | hypothetical protein TERM 26 50575 - 50563 - g 72 -6.2 -4.30719 | CGCGGTTACAATAAA CGCC GTAGT GGCG CTGGGAGAGGAAATA Pcal_0048 50114 - 51001 + | abortive infection protein Pcal_0049 51029 - 51628 + | PaREP1/PaREP8 domain-contain protein Pcal_0050 52477 - 52166 - | hypothetical protein Pcal_0051 53346 - 52453 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pcal_0052 53691 - 53350 - | hypothetical protein Pcal_0053 54062 - 54373 + | 50S ribosomal protein L14e TERM 27 54700 - 54660 - g 86 -14.1 -3.30124 | overlap 54661 GTCTAGGGCGGACAA GGTCTACATAGCCGTGG CCAAGTT CCACGGCGATGTAGACG TAGAAAATCTGCGGA TERM 28 54699 - 54661 - g 87 -17.6 -2.57931 | overlap 54660 TCTAGGGCGGACAAG GTCTACATAGCCGTGG CCAAGTT CCACGGCGATGTAGAC GTAGAAAATCTGCGG Pcal_0054 54370 - 55371 + | H/ACA RNA-protein complex component Cbf5p Pcal_0055 55407 - 55673 + | hypothetical protein Pcal_0056 55670 - 56164 + | hypothetical protein Pcal_0057 56186 - 56644 + | hypothetical protein Pcal_0058 56641 - 57573 + | oxidoreductase domain-containing protein TERM 29 57798 - 57821 + F 72 -6.7 -4.18506 | CGAAAGTTTAGGCGG CGCCAGTCT CTACGT ATACTGGCG TTATTTTACACGTGG TERM 30 57924 - 57963 + G 74 -7.2 -4.30719 | gap 1, overlap 57927 GCTTGGGGAAGAGTT CAAGTTGGCCCTATCTAGG GCG TCT-GATGGCGCCAACGTG TTTATTGTGGGGCCG Pcal_0059 57865 - 58407 + | AAA ATPase Pcal_0060 58972 - 58394 - | abortive infection protein Pcal_0061 58999 - 59469 + | hypothetical protein Pcal_0062 60247 - 59459 - | competence damage-inducible protein A Pcal_0063 61113 - 60256 - | hypothetical protein TERM 31 61310 - 61330 + G 71 -12.7 -2.63585 | opp_overlap 61309 61310, overlap 61309 61307 GAGCTCTACGACAAG TTCAAAGCC AAG GGCTTTGAA GTATTTGGAGTGTCC TERM 32 61330 - 61310 - g 71 -12.7 -2.64416 | opp_overlap 61310 61309 61307, overlap 61309 GAGCTCTACGACAAG TTCAAAGCC AAG GGCTTTGAA GTATTTGGAGTGTCC Pcal_0064 61160 - 61570 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Pcal_0065 62350 - 61769 - | peroxiredoxin-like protein Pcal_0066 63029 - 62370 - | HhH-GPD family protein Pcal_0067 63077 - 63562 + | hypothetical protein TERM 33 63661 - 63649 - g 70 -4.7 -4.42386 | overlap 63650 TGGCCAGCGACAAAA TCGCC CTC GGCGG TAAGTCGTGGATAAG Pcal_0068 63606 - 64379 + | hypothetical protein TERM 34 65392 - 65371 - g 75 -5.8 -4.62336 | overlap 65373 AGTTTACTGGAAAAA TCGCGCCT ATCCTA AGGCGCCA CCTCCCCCTAGAGCA Pcal_0069 64428 - 65900 + | carboxypeptidase Taq Pcal_0070 66549 - 65872 - | hypothetical protein Pcal_0071 66564 - 67025 + | phosphopantetheine adenylyltransferase Pcal_0072 68318 - 67002 - | hypothetical protein TERM 35 68331 - 68312 - G 78 -7.8 -4.42788 | TGCAACGGGAGAAAA CTTCCACG GCCT CGGGGAAG ATAAACGTTTTAAAT TERM 36 68355 - 68371 + r 76 -7.9 -4.21974 | TTTAAATTATCTCAC CCAGCCT ATT AGGCGGG TTTGTTGACTCGTGA Pcal_0073 68777 - 68406 - | hypothetical protein Pcal_0074 69589 - 68792 - | hypothetical protein Pcal_0075 69794 - 70564 + | prephenate dehydratase Pcal_0076 71090 - 70539 - | PaREP1 domain-containing protein TERM 37 71133 - 71145 + H 85 -6.9 -4.85129 | opp_overlap 71133 GCTAAGTGTTATAAA GGGGG CCT CCCTC TTTTTCATGTATGGT Pcal_0077 71152 - 73044 + | aldehyde ferredoxin oxidoreductase Pcal_0078 75153 - 73027 - | DEAD/DEAH box helicase domain-containing protein TERM 38 74706 - 74678 - G 79 -13.1 -3.25102 | overlap 74676 AGCTTAGCCACAATA GACTCGAGGACGG GCC CCCTCCTCGGGTC CCCCAGGTAGTGAAT TERM 39 75015 - 74994 - G 80 -10.1 -4.08216 | CCACCTCGGCCAAAA GCGACTTCC CCGA GGCAGTCGC CGTACATAACAAGAC Pcal_0079 75249 - 76571 + | hypothetical protein Pcal_0080 76568 - 77008 + | hypothetical protein Pcal_0081 77005 - 80445 + | hypothetical protein Pcal_0082 80442 - 81128 + | hypothetical protein Pcal_0083 81125 - 81688 + | hypothetical protein TERM 40 82358 - 82375 + G 71 -11.3 -3.18239 | overlap 82361 CCGAGGAGCGTCGAG GTCGTCC TCCT GGACGAC TTGGTGGACTCTGTG Pcal_0084 81749 - 83788 + | replicative DNA helicase Mcm TERM 41 83838 - 83824 - T 83 -6.4 -4.88067 | opp_overlap 83828, overlap 83828 83829 AGTTAGCGATAAAAA CTAAGC TCC GCCTAG CGGTGACGGGGCTAG Pcal_0085 84995 - 83850 - | hypothetical protein TERM 42 84621 - 84602 - G 79 -13.6 -3.04144 | CCTCCACCTCCAACA CCACGTGG CTGG CCACGTGG CCCTCGCCGAGGGCC Pcal_0086 85585 - 85025 - | methyltransferase type 11 Pcal_0087 86308 - 87738 + | hypothetical protein Pcal_0088 87763 - 89196 + | radical SAM domain-containing protein Pcal_0089 89227 - 90228 + | histidinol phosphate aminotransferase Pcal_0090 92779 - 90197 - | hypothetical protein TERM 43 92054 - 92037 - G 70 -4 -4.58395 | overlap 92039 92040 TCGACCTTGGAAAAA CACGCC GCCACA GGCGAG CCGTCCAAAAGCACA Pcal_0091 93057 - 92869 - | PaREP6 domain-containing protein/PaREP6 domain-containing protein TERM 44 93097 - 93081 - R 75 -5.1 -4.62471 | overlap 93082 TGTAAGTTGTAAAAA CGCCAAT GGA ACTGGCA ATTGGGCGCCCAATC TERM 45 93218 - 93259 + r 71 -10.7 -2.95093 | opp_overlap 93218 93216, overlap 93217 ACTTAACACGCAACA CGGCTGGTAAGGCCCTCCA AGCG TGGAGAGCCGCCCTAGCCG CTTTGCTTAGGCTGT TERM 46 93259 - 93218 - R 85 -12.9 -3.1577 | opp_overlap 93217 93218, overlap 93216 ACTTAACACGCAACA CGGCTGGTAAGGCCCTCCA AGCG TGGAGAGCCGCCCTAGCCG CTTTGCTTAGGCTGT Pcal_0093 94565 - 93630 - | hypothetical protein TERM 47 94114 - 94124 + g 71 -6.8 -4.2231 | TTCGTCGCCATTCTA GCCT CTA AGGC TTTTAAATCCTCCTT Pcal_0094 94691 - 95044 + | hypothetical protein TERM 48 95467 - 95453 - g 70 -2.1 -4.72272 | gap 1 TCTTTGTACTAAAAA GT-GGG CTCT CCCTAC ACGCAAAAGCTAGCG Pcal_0095 95095 - 95622 + | hypothetical protein Pcal_0096 95652 - 96278 + | hypothetical protein Pcal_0097 96724 - 96356 - | hypothetical protein Pcal_0098 96892 - 98007 + | hypothetical protein TERM 49 98956 - 98971 + G 71 -10.4 -3.54129 | AGTGGTACTGCAATC TGGCGC TGTG GCGCCA TTTACAGCAACTGTA Pcal_0099 98585 - 99031 + | hypothetical protein Pcal_0100 100434 - 99193 - | hypothetical protein TERM 50 100245 - 100271 + g 73 -12.2 -3.02263 | CTGGCACGTCCAGCG CCAGGGCCACCG CGG CGTTGCCCCTGG TCTTGAAGGGGATGT TERM 51 101098 - 101110 + r 81 -10.5 -3.67141 | opp_overlap 101097 CTTTAGCCTACACAT GGCGG GGC CCGCC TTTAGGTCAGATTCT Pcal_0101 101827 - 101561 - | hypothetical protein Pcal_0102 102618 - 101806 - | hypothetical protein TERM 52 102326 - 102363 + g 72 -9 -3.86015 | overlap 102333 TCGACGCTGGTGGGG GTCGGCACTGCCACCA CCGCAT TGGCGGCCGTGGCGGC TTTGTCCAAGAGGTG TERM 53 104182 - 104209 + G 70 -4 -4.56775 | gap 1, overlap 104187 104193 CGCGGTCTCATTGGC CCTGTTTGGGGGC CGC GTCCCC-GGCTGG TTTTTACCCCCGCCT Pcal_0104 103877 - 104371 + | hypothetical protein Pcal_0105 104617 - 104336 - | hypothetical protein Pcal_0106 104688 - 105317 + | hypothetical protein Pcal_0107 106247 - 105312 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta Pcal_0108 108172 - 106259 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 54 106779 - 106817 + g 72 -5.8 -4.41616 | opp_overlap 106774 CCGGGGAGAAGCCTG GGGGGCACAAGCGAGTCC AGG GGATAGGCCTCTGCCTCC TTTGTTTGAGGAAAT TERM 55 107185 - 107229 + g 71 -11.2 -3.29461 | GGCTGAAGCCGGGGC CGGAGGTGGCCGTGGCCGCC CTAGC GCCGGCGATGGCGGCCCCCG TTGTCACCGCGATTG TERM 56 108010 - 108035 + g 73 -11.9 -3.14564 | opp_overlap 108012 108014 AGATTGTGCCTACCA CATAGCTGTGG CGTC CCCCAGCTATG TTGCTCCAGAACTCG Pcal_0109 108578 - 108273 - | hypothetical protein Pcal_0110 109153 - 108566 - | multiple antibiotic resistance (MarC)-related protein Pcal_0111 110458 - 109259 - | D-fructose 1,6-bisphosphatase Pcal_0112 110473 - 110961 + | GCN5-related N-acetyltransferase Pcal_0113 111043 - 112071 + | carbamoyl phosphate synthase small subunit carB 112058 - 115135 + | carbamoyl phosphate synthase large subunit Pcal_0115 115129 - 115923 + | alpha-L-glutamate ligase Pcal_0116 116409 - 115909 - | PaREP1 domain-containing protein Pcal_0117 117410 - 116439 - | AIR synthase-like protein TERM 57 117712 - 117724 + G 71 -10.5 -3.56643 | overlap 117687 CCCCACGTCGCAGGA GGCCC TCC GGGCC TTTGAACACTGTGCC Pcal_0118 117437 - 118345 + | GntR family transcriptional regulator Pcal_0119 118323 - 118871 + | hypothetical protein Pcal_0120 119005 - 120099 + | extracellular solute-binding protein Pcal_0121 120126 - 120299 + | paREP10 TERM 58 120293 - 120305 + F 91 -3.4 -5.47431 | GGTGGCGCAGCGAAG GCTT TAAAC AAGC TTTTTTCTCTCTTGC Pcal_0122 120321 - 120842 + | molybdenum cofactor synthesis domain-containing protein Pcal_0123 120839 - 121369 + | hypothetical protein Pcal_0124 121908 - 121366 - | abortive infection protein Pcal_0125 122008 - 122505 + | hypothetical protein Pcal_0126 123064 - 122483 - | thymidylate kinase TERM 59 122546 - 122561 + g 71 -11.8 -2.87564 | TTTCGCCACCTCGCC CGCCGG CCTC CCGGCG TCTATCACGGGGTAG Pcal_0127 124547 - 123093 - | FAD dependent oxidoreductase TERM 60 123147 - 123162 + g 77 -10.4 -3.85698 | opp_overlap 123143 AGCCGCTAAGACGCC CGTGGC GGCG GCCACG TTTATGCCCCGGGAC Pcal_0128 124656 - 125660 + | adenylosuccinate synthetase Pcal_0129 125657 - 126883 + | fumarate lyase TERM 61 127320 - 127305 - g 73 -3.2 -4.84311 | GCCGAGAGAATAAAA GCGG CCAAGGTT CCGC ACATAGGCTGGAGCT hisH 126981 - 127571 + | imidazole glycerol phosphate synthase subunit HisH Pcal_0131 127963 - 127577 - | phosphoribosyl-AMP cyclohydrolase TERM 62 128015 - 128041 + r 70 -4.2 -4.67755 | TTGACCAAGAGATAG GTGTCGGCGCCG TTG CGGATCTGCCAC TTTTTGCGTGCCTAT Pcal_0132 129835 - 128171 - | cobalamin B12-binding domain-containing protein Pcal_0133 129952 - 131025 + | histidinol phosphate aminotransferase TERM 63 131265 - 131301 + G 71 -10 -3.53012 | overlap 131266 CGACTACGTGGTGGA GTCCGGCGCCAGCGTC GTCGA GGCGCTGGAGCTGGGG TTTGGGAGGGGGAGG TERM 64 131266 - 131300 + G 76 -13.5 -2.71712 | overlap 131265 GACTACGTGGTGGAG TCCGGCGCCAGCGTC GTCGA GGCGCTGGAGCTGGG GTTTGGGAGGGGGAG hisG 131044 - 131892 + | ATP phosphoribosyltransferase Pcal_0135 132177 - 131893 - | phosphoribosyl-ATP pyrophosphatase Pcal_0136 133289 - 132174 - | histidinol dehydrogenase Pcal_0137 134044 - 133286 - | imidazole glycerol phosphate synthase subunit hisF Pcal_0138 134123 - 135562 + | hypothetical protein Pcal_0139 135597 - 136160 + | imidazoleglycerol-phosphate dehydratase Pcal_0140 136157 - 136843 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Pcal_0141 138294 - 136840 - | hypothetical protein Pcal_0142 138631 - 138335 - | ArsR family transcriptional regulator TERM 65 138610 - 138594 - G 77 -2.1 -5.16572 | overlap 138596 ATCCAATTTAAAAAA TCCTGCG TAG CGCCGTA CAAGTTTAAAAACCA TERM 66 138663 - 138705 + H 70 -11 -2.79322 | overlap 138662 138692 GACTACGCCGGGCAA GGCCGGCGCCGTGCCGCGCT GTG ACCCCGGCGGGGCGCCTCCC CTCTTCTTTATATAC Pcal_0143 138673 - 139179 + | hypothetical protein Pcal_0144 139209 - 140462 + | glutamyl-tRNA(Gln) amidotransferase subunit D Pcal_0145 140459 - 140986 + | metal dependent phosphohydrolase Pcal_0146 141510 - 140962 - | ZPR1-like zinc finger protein Pcal_0147 141558 - 141818 + | hypothetical protein Pcal_0148 141855 - 142412 + | hypothetical protein Pcal_0149 143124 - 142402 - | aspartate/glutamate/uridylate kinase Pcal_0150 144129 - 143125 - | polyprenyl synthetase Pcal_0151 144191 - 144907 + | hypothetical protein Pcal_0153 147193 - 145355 - | peptidase S49 Pcal_0154 148722 - 147598 - | citrate synthase Pcal_0155 150673 - 148724 - | AMP-dependent synthetase and ligase TERM 67 149051 - 149009 - G 71 -8.3 -3.99324 | CTTTAGCACCACAAA GGC-GGCGATGGCCTCCCCCC TCA GGGGGTCGGGCA-CGCCCACC ACAGCCGCCTCAGCC TERM 68 149112 - 149127 + g 70 -2.4 -4.86001 | overlap 149113 149114 ACCTCTATAGTGCCT ATGCGG TGCC CCGCGA TTTTTATAACCTCGT TERM 69 149279 - 149297 + g 71 -7.3 -4.1552 | opp_overlap 149271 CCACAGAGTGGGCGT GAGCCCC GGGAA GGGGCGC TTTATTACCACAATC TERM 70 149383 - 149399 + g 72 -9.3 -3.68366 | CACCGGGGAGGGGTT GCCCCGC GGA GCCGGGC TTAATTTTCACATAC Pcal_0156 151234 - 150788 - | phosphohistidine phosphatase, SixA Pcal_0157 151289 - 151573 + | thiamineS protein Pcal_0158 152514 - 151570 - | beta-lactamase domain-containing protein TERM 71 151647 - 151670 + g 75 -3.8 -4.77567 | GGTAGAGCAGGTGGC TGTACGCC TCTCCCAC GGCGAACA TTTTATTATACACGT TERM 72 152413 - 152382 - G 75 -8.6 -4.08692 | gap 1 TAAGCCCCCTCAAAA GGGCCAGCGCCGCCT CGT AGGTGGCAA-GGCCC ACGTCTACAAGCCCA Pcal_0159 152539 - 153228 + | sugar fermentation stimulation protein Pcal_0160 154056 - 153208 - | hypothetical protein Pcal_0161 154093 - 154902 + | beta-lactamase domain-containing protein TERM 73 155235 - 155224 - g 70 -3.6 -4.56775 | overlap 155225 AGCCCTTCTGAAAAA CCCG CCGC CGGA GGTGAGAGACCAAGT TERM 74 156714 - 156735 + G 71 -10.2 -3.53012 | opp_overlap 156730 ACCAAGTGCGGAGGC TCGGCGTT AGAGCA AACGCCGA TTTGCCCGACGACGC Pcal_0162 155021 - 157759 + | pyruvate phosphate dikinase Pcal_0163 157944 - 158210 + | hypothetical protein Pcal_0164 158207 - 158905 + | putative ATP binding protein TERM 75 159051 - 159009 - f 70 -6.8 -4.04319 | opp_overlap 159019, overlap 159005 CTACAAAGTTATAAA CAGCGACTTTTTAATGCCGC GGA GCGGCAGAGATATGTCGCCG TCTAAAGTAGCTGGA Pcal_0165 159043 - 160866 + | hypothetical protein Pcal_0166 163056 - 161185 - | AMP-dependent synthetase and ligase Pcal_0167 163103 - 164233 + | acyl-CoA dehydrogenase domain-containing protein Pcal_0168 164562 - 164230 - | hypothetical protein Pcal_0169 166293 - 164590 - | hypothetical protein TERM 76 166165 - 166143 - G 86 -9 -4.57837 | ACATGGCGGTAAAAA CGGCGGCGGA TTT CCCAACGCCG TGAGGCCCCAAGACG Pcal_0170 166324 - 167133 + | hypothetical protein Pcal_0171 167123 - 167611 + | Miro domain-containing protein Pcal_0172 168544 - 167603 - | thioesterase superfamily protein rpl18p 169460 - 168843 - | 50S ribosomal protein L18P TERM 77 169374 - 169392 + g 79 -13.2 -3.33361 | opp_overlap 169379, overlap 169366 169364 GCGGGGCTTCCTCGA GAGGAGGA GCT TCCTCCTC TTCCTATAGTTCGTA rpl19e 169905 - 169462 - | 50S ribosomal protein L19e rpl32e 170369 - 169908 - | 50S ribosomal protein L32e TERM 78 170409 - 170395 - R 74 -8.5 -3.85909 | CTATTTAAACTTAAA GCCGC AAAAG GCGGC CCTAGTAGACGTAGG rps8p 170803 - 170411 - | 30S ribosomal protein S8P rps14P 170998 - 170834 - | 30S ribosomal protein S14P Pcal_0178 171929 - 171030 - | extracellular solute-binding protein Pcal_0179 172792 - 171971 - | hypothetical protein TERM 79 172561 - 172535 - G 74 -11.6 -3.53343 | overlap 172537 AATCTCTCTGTCAAA CACCACGACAAG CCT CTTGCCGCGGTA CACAAACTCGCCATA TERM 80 172559 - 172537 - G 76 -12 -3.34398 | overlap 172535 TCTCTCTGTCAAACA CCACGACAAG CCT CTTGCCGCGG TACACAAACTCGCCA Pcal_0180 173179 - 173928 + | hypothetical protein Pcal_0181 173958 - 174173 + | hypothetical protein TERM 81 175229 - 175255 + G 81 -13 -3.53811 | AGGAGGCTGGGCATA CCCGTGGCCC CCTTCAA GGGCTACGGG TTTAGAACCACTGCC Pcal_0182 174542 - 175639 + | D-proline dehydrogenase Pcal_0183 176159 - 175626 - | hypothetical protein Pcal_0184 176812 - 176159 - | 3-Cys thioredoxin peroxidase Pcal_0185 177438 - 176911 - | hypothetical protein Pcal_0186 177439 - 178170 + | short-chain dehydrogenase/reductase SDR Pcal_0187 180158 - 178359 - | hypothetical protein TERM 82 180632 - 180600 - H 83 -5.6 -5.1356 | gap 1, opp_overlap 180602, overlap 180602 CCCCACCAAGAAAAA CG-GCGACCTACTTG CAAA CAAGTAGGCAACTCG TTCAATATAAGGGGG Pcal_0188 180870 - 181208 + | hypothetical protein TERM 83 182355 - 182316 - g 74 -12.6 -2.87564 | GTACTTTGCCACATA CCCCGCGGCGCTGGCCGC GGCT GCGGCTGGCGGCGGGAGG CTGCCCACGCTGGCC Pcal_0189 181846 - 182508 + | hypothetical protein TERM 84 182713 - 182662 - f 81 -12.3 -3.2614 | gap 2 GACGCGGCAGAGCAA CGCGCAG--GCGCGCCGGGACACCT GTGG AGATGCCCCAGCCCGGGACTGCGCG AGACTTGCCGGCGTT Pcal_0190 182799 - 183965 + | major facilitator transporter TERM 85 183970 - 183959 - T 81 -7.2 -4.72127 | overlap 183960 AGACAAGAGAGAAAA GGCG TAAC CGCC CGCGGGTCGGCAGGG TERM 86 184394 - 184371 - T 76 -12.4 -2.54387 | overlap 184360 TAAAGGGGCAACCCA TGCACCCGGG AGGA CCCGGGTTCA AATCCCGGCCGCCGC Pcal_0191 185123 - 184431 - | membrane protein-like protein Pcal_0192 188873 - 185454 - | hypothetical protein TERM 87 189922 - 189936 + H 71 -2.8 -4.75219 | overlap 189924 ATACTAGCATAGGTC TCGAAG ACG CTTCTA TTTTCTTACTGCTTA TERM 88 190341 - 190356 + H 74 -3.2 -5.00339 | opp_overlap 190335, overlap 190330 190332 AGCGGATAACCAATA GGCTGG GTAT CTAGTC TTTTTGGTTATTAAT TERM 89 190412 - 190400 - H 74 -6.2 -4.58424 | opp_overlap 190405, overlap 190402 TAGTATTAGACAAAA GCCG TGGTG CGGC ACTTCGCTCCCTCTT Pcal_0193 190639 - 192069 + | hypothetical protein TERM 90 193625 - 193637 + G 71 -6.9 -4.16943 | overlap 193619 CTCCACTGGGGCCGA CGGCG TTG CGTCG TTTTGGGGTCTGGCG TERM 91 194421 - 194441 + G 76 -12.6 -3.06915 | GGTGCCGTGTATACG GCCAAGGC GTCGG GCCTTGGC TTCACTAACGTGACT Pcal_0194 192399 - 195086 + | hypothetical protein Pcal_0195 195858 - 195289 - | hypothetical protein Pcal_0196 196469 - 195927 - | hypothetical protein TERM 92 196392 - 196428 + g 70 -4.4 -4.43844 | gap 1, overlap 196392 196391 196393 TAACAGCCTGAGGCT GACG-TTGCCGAAGTAG TGTA CTATGGCGGCGATCGTC TTTTCTACCTCGTCG TERM 93 196584 - 196634 + H 93 -6.2 -5.27206 | gap 3, overlap 196584 196632 AAACGATGTGTACAC TT-TGAGAGGGGGCG--GCCCTCTG CCGC CTGTGGGCAACGCCTCCTCTCGCAA TTTTTATTGTCTGTG Pcal_0197 196661 - 197377 + | hypothetical protein TERM 94 197386 - 197419 + T 86 -12.3 -3.53012 | opp_overlap 197367 GATGTAGCGGCTGGG CGCCTTCGCCGCCGC TGTG GGGGCGGTGGACGCG TTTGGCGGGGGACCG Pcal_0198 198108 - 197503 - | hypothetical protein TERM 95 197695 - 197709 + g 76 -12.8 -3.07043 | GTCGGCGTCTGGGCA GCCGCG CCC CGCGGC TATTAGGGTGATGCC TERM 96 197989 - 198006 + g 73 -11.3 -3.37796 | CGCCAGCCTCTTGGC CACGTGG GGGG CCACGTG TTGTACGTAGTGGAG Pcal_0199 198141 - 199358 + | acyl-CoA dehydrogenase domain-containing protein Pcal_0200 199355 - 200047 + | adenine phosphoribosyltransferase Pcal_0201 200075 - 200491 + | signal-transduction protein Pcal_0202 200503 - 201315 + | ExsB family protein Pcal_0203 202070 - 201294 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pcal_0204 202132 - 203901 + | aldehyde ferredoxin oxidoreductase Pcal_0205 204577 - 203888 - | hypothetical protein TERM 97 203981 - 203957 - G 75 -5.6 -4.56597 | GTCGTTGTTGAAAAA GACGTAGACC CGCTC GGCCCCCGTC TCTACGATGCGCCTG Pcal_0206 205761 - 204580 - | Formyl-CoA transferase Pcal_0207 207344 - 206229 - | TRAP transporter solute receptor TAXI family protein Pcal_0208 207404 - 209422 + | TRAP transporter, 4TM/12TM fusion protein Pcal_0209 210043 - 209444 - | SNO glutamine amidotransferase TERM 98 209807 - 209828 + g 78 -4.3 -4.9181 | CAGCCCGGCGCAAGT GGCGAGGAT GGGC AACGTCGCC TTTTTAATGTTGTCT Pcal_0210 211050 - 210040 - | pyridoxine biosynthesis protein Pcal_0211 211280 - 211609 + | hypothetical protein Pcal_0212 212966 - 211626 - | hypothetical protein Pcal_0213 213108 - 215330 + | elongation factor EF-2 TERM 99 216162 - 216172 + GF 73 -3.2 -4.82901 | ATATGAGGGCCGCCA CGTA CAG TGCG TTTTTGTACAGAGAG TERM 100 216344 - 216334 - gf 78 -8.2 -4.20868 | overlap 216328 GGTGGAAAACAACAA GGGG TTG CCCC AGCCTCAGACAGTTG Pcal_0214 215423 - 216436 + | ABC transporter periplasmic-binding protein TERM 101 217689 - 217708 + GT 74 -7.8 -4.13767 | gap 1, overlap 217686 217692 CGCCGCCTCCACGCT GTC-GGCGG AGG CCGCCAGGC TTTTGACCTCGCGGG Pcal_0215 216409 - 217833 + | putative thiamine transport system permease protein Pcal_0216 218747 - 217821 - | ABC transporter related Pcal_0217 219328 - 218747 - | hypothetical protein Pcal_0218 219430 - 220479 + | amidohydrolase TERM 102 220542 - 220519 - f 73 -9.5 -3.65351 | opp_overlap 220515 220520 220538, overlap 220520 CGACGCCTAGGGAAA TCGCGGCGA GGGATA TCGCCGCGT CTCTTGCGTTGACTA TERM 103 220520 - 220541 + F 85 -13 -3.13788 | opp_overlap 220520 220519, overlap 220515 220538 GACGCCTAGGGAAAT CGCGGCGA GGGATA TCGCCGCG TCTCTTGCGTTGACT TERM 104 220541 - 220520 - f 81 -13 -2.78996 | opp_overlap 220515 220520 220538, overlap 220519 GACGCCTAGGGAAAT CGCGGCGA GGGATA TCGCCGCG TCTCTTGCGTTGACT Pcal_0219 220653 - 221606 + | ABC transporter related Pcal_0220 221593 - 222318 + | ABC-2 type transport system, membrane protein Pcal_0221 222743 - 222414 - | GTP cyclohydrolase I Pcal_0222 222805 - 224394 + | alpha amylase, catalytic region Pcal_0223 224412 - 225554 + | AAA ATPase Pcal_0224 225558 - 226745 + | dihydroorotase Pcal_0225 227172 - 226696 - | hypothetical protein TERM 105 228132 - 228157 + G 71 -6.9 -4.18018 | gap 1 CCTGCCCTTACGCCG GACTTCAGCCAG CGC TTGGC-GGAGTC TTTTGAGTACCGGGC Pcal_0226 227352 - 228272 + | hypothetical protein TERM 106 228257 - 228269 + F 70 -10.5 -2.76539 | opp_overlap 228236 CGCCGCGCTGGCGGC GCCGC ATA GCGGC TAAATTTATTAAGTG Pcal_0227 228302 - 228724 + | hypothetical protein TERM 107 228770 - 228743 - f 81 -10.7 -3.69681 | gap 1, overlap 228741 TCAATAAATTAAATA CTGGGAGCA-GT TTTAC ACATGCTCCCAG AGCTTAGCGACTTGG Pcal_0228 228761 - 229177 + | hypothetical protein Pcal_0229 229803 - 229174 - | superoxide dismutase Pcal_0230 230616 - 229846 - | ABC-2 type transporter TERM 108 230281 - 230293 + g 71 -10.5 -3.5594 | overlap 230261 TAGGCCTCTTGTAAC GGCGC CAA GCGCC TTTGCCAAGTGGATT Pcal_0231 231563 - 230613 - | daunorubicin resistance ABC transporter ATPase subunit Pcal_0232 232143 - 231592 - | peptidase S26B, signal peptidase TERM 109 232202 - 232186 - R 93 -12.3 -3.91144 | opp_overlap 232189 TTTAGAGCTGATAAA GGAGCTG GGC CAGCTCC TCTAGGTCTAGGGTC Pcal_0233 233314 - 232172 - | hypothetical protein TERM 110 232758 - 232776 + g 73 -13.1 -2.75963 | overlap 232757 GCGCAGTTTACCACG GCGGCGG GGTAG CCGCCGC ATTTGAGGTAGAGCT TERM 111 232911 - 232875 - G 71 -7.1 -4.11484 | GCGAATTTTTTAAAA GAGAGCGGGTACATGAC GTA GTCCCGCCCCCACCCCC TCCGGCCTGGGAAAG Pcal_0234 233773 - 233438 - | hypothetical protein Pcal_0235 234765 - 233770 - | band 7 protein TERM 112 233991 - 234023 + g 85 -15.5 -3.17075 | overlap 234000 GCTGGGCCTGGGCCC TGGCCCTGGCCAGCG TGG CGTTGGCCTCGGCCA TTGCGTTCAACACGA Pcal_0236 235686 - 235078 - | methyltransferase Pcal_0237 236101 - 235661 - | NUDIX hydrolase Pcal_0238 236144 - 236815 + | ABC transporter related Pcal_0239 237513 - 236812 - | metallophosphoesterase Pcal_0240 238859 - 237510 - | phosphomethylpyrimidine kinase TERM 113 238960 - 238949 - R 81 -5.8 -4.8048 | GGCTGACAGCAAAAA GCGA TACG TCGC CGACAGCACGTGTAC Pcal_0241 239775 - 239302 - | NUDIX hydrolase Pcal_0242 241092 - 239866 - | translation initiation factor IF-2 subunit gamma TERM 114 240096 - 240116 + g 74 -11.1 -3.53722 | overlap 240097 GCTCGGGCTTCTCGC CGCCCATGC GGG GCATGGGCC TTGTCTCAATCTCCA TERM 115 240097 - 240115 + g 80 -14.6 -2.71912 | overlap 240096 CTCGGGCTTCTCGCC GCCCATGC GGG GCATGGGC CTTGTCTCAATCTCC TERM 116 240550 - 240574 + g 75 -12.1 -3.28924 | GTTCACCTTGTGGAG GGCCGAGATGG GCA CCACCTTGGCC TTCTCGGCCCACGTC Pcal_0243 241160 - 242188 + | ABC transporter related Pcal_0244 242185 - 243987 + | binding-protein-dependent transport systems inner membrane component Pcal_0245 244037 - 244402 + | hypothetical protein TERM 117 244858 - 244841 - g 71 -8.3 -4.07568 | opp_overlap 244857 GCCGCGGCTGGAAAA GCGGCCG AAGT CGCCCGC ACGGCTTTTGCCGAG Pcal_0246 244694 - 245839 + | aminotransferase, class V Pcal_0247 246489 - 245836 - | protein-disulfide isomerase-like protein TERM 118 245970 - 245956 - G 74 -11.4 -3.54424 | opp_overlap 245951 245950 GCCCACTTTTCCAAA GGCGTC TGA GACGCC CATGGCTTGTGCAAG TERM 119 246560 - 246535 - R 79 -9.7 -3.85698 | gap 1, overlap 246537 GTGCCCCCGTAGAAA GACC-CCGATCC CGG GGCTCGGGGGTC AAAAAGCTAGGGTAT TERM 120 246557 - 246537 - R 86 -12.5 -3.51934 | overlap 246535 GCCCCCGTAGAAAGA CCCCGATCC CGG GGCTCGGGG GTCAAAAAGCTAGGG Pcal_0248 248102 - 246567 - | extracellular solute-binding protein TERM 121 246640 - 246666 + g 71 -7.2 -4.23674 | GAGTAGATCTTGTCG CGGTAGGTGGGG TTG CCCAACTTGTCG TTTATCTTCATGGCG Pcal_0249 248192 - 249535 + | hypothetical protein Pcal_0250 249532 - 251424 + | metallophosphoesterase Pcal_0251 251623 - 251411 - | hypothetical protein TERM 122 251621 - 251642 + g 78 -2.9 -5.10064 | overlap 251624 TTGCTCCACCTTGAG CATGGCC TCTTCAAC GGCCCTG TTTTTATCTCTTCCG Pcal_0252 251879 - 251646 - | hypothetical protein Pcal_0253 252419 - 252081 - | hypothetical protein TERM 123 252226 - 252246 + g 73 -3.1 -4.84359 | overlap 252230 AGCCCCTCTAAAAGC GCCAGGGAG AGC CTCTCCAGC TTTTTCTCAACGTCG Pcal_0254 252834 - 252442 - | HEPN domain-containing protein TERM 124 253032 - 253075 + G 88 -13.8 -3.74747 | opp_overlap 253043 253044 GGCCTTACTCGCAAC GCGGCTGGAAAGGCCTTCCA GGCA TGGAAGGCTGTGCTCGCCGC TTTGCTCAAGCTTGA TERM 125 253063 - 253044 - g 70 -12.2 -2.72043 | opp_overlap 253032, overlap 253043 AACGCGGCTGGAAAG GCCTTCCA GGCA TGGAAGGC TGTGCTCGCCGCTTT Pcal_0255 252903 - 253445 + | PaREP1 domain-containing protein Pcal_0256 253813 - 254577 + | hypothetical protein TERM 126 255151 - 255139 - g 72 -4.7 -4.61633 | AGAGACGTTGAAAAA CCGCG TCA CGTGG ACAGAGGAACACGAG Pcal_0257 254657 - 255199 + | PaREP1 domain-containing protein TERM 127 255394 - 255437 + G 86 -14.6 -3.23447 | opp_overlap 255380, overlap 255380 255392 AGGCTCACCCGTAAT GCGGCGGGTAAGGCTTTTCA AGCG TGGAAGGCCGTACTCACCGC TCTTCTCAAGCTTGA Pcal_0258 255265 - 255759 + | PaREP1 domain-containing protein Pcal_0259 256729 - 255881 - | hypothetical protein Pcal_0260 257653 - 256757 - | hypothetical protein Pcal_0261 258628 - 257876 - | hypothetical protein TERM 128 258101 - 258065 - G 74 -13 -2.87132 | gap 1 GGCTGTTCTGAGAGA GGCCTTGGCC-ACGGCC ACGT AGCCGTAGGCCCAAGCC GCCACCCTCCTCACA TERM 129 258166 - 258138 - G 71 -13.1 -2.69471 | overlap 258118 258137 TCAGTGGCAGAGAAG CCCAGCACCTCCT GCG AGGAGGGGCCGAG GGCCCTGGCCGCGTG Pcal_0262 258662 - 258937 + | hypothetical protein Pcal_0263 259496 - 259038 - | hypothetical protein Pcal_0264 259685 - 259530 - | hypothetical protein Pcal_0265 260286 - 259693 - | CRISPR-associated RAMP Csa1 family protein Pcal_0266 261526 - 260813 - | CRISPR-associated Csa3 family protein TERM 130 261020 - 261040 + g 100 -16.9 -4.59773 | opp_overlap 261007 GACGGCGAGTTTTTC CTCGCCGAG CCT CTCGGCGAG TTTTTGGGCATACAC Pcal_0267 262171 - 261614 - | hypothetical protein TERM 131 261942 - 261923 - G 77 -12.1 -3.54424 | overlap 261934 CGCGAGCTCCCTAAA CCGCGGC AGAAGA GCCGCGG CCGTCTCCGCCGCCA Pcal_0268 262680 - 262168 - | hypothetical protein Pcal_0269 263951 - 262680 - | hypothetical protein TERM 132 265340 - 265350 + r 70 -6.8 -4.03321 | opp_overlap 265329 AAATGTAGTTTTTGA CCAC TTC GTGG TTTAGTATTTGGTCT Pcal_0270 266596 - 265427 - | CRISPR-associated Csx1 family protein Pcal_0271 267426 - 266593 - | CRISPR-associated Cmr3 family protein Pcal_0272 270230 - 267423 - | CRISPR-associated Cmr2 family protein TERM 133 268158 - 268179 + g 75 -12.3 -3.29144 | gap 1 CATGTGCTCTTCTAC GGCGC-GGAG CAC CTCCAGCGCC TTCTCGCGGCCCTCC TERM 134 269717 - 269697 - G 70 -11.8 -2.79023 | overlap 269694 TAAGGTGACGAAGTA GCCGGAGG GCTTG CCCCCGGC GAGGAGCCAGTTGGC TERM 135 269870 - 269837 - G 76 -12.5 -3.02263 | gap 1, opp_overlap 269847 ACAGGGCCTCGAATA GGGCGTAGAG-GACGT GGT ACGCCTCTCTAGGCCC CTTAGCCGCCCTCAC TERM 136 270632 - 270616 - g 74 -13.7 -2.52676 | opp_overlap 270615 270614 GACCTTTGTAACCTA CGCCGAG GCC CTCGGCG CGTTTCAGCCCCTTG Pcal_0273 270269 - 271171 + | CRISPR-associated RAMP Cmr4 family protein family protein Pcal_0274 271174 - 271584 + | CRISPR-associated Cmr5 family protein TERM 137 271937 - 271976 + G 71 -10.1 -3.62096 | CAGGCGCAGGGAGGG CCTCGTG-AGAGTGGCCGG GCGG CAGGCCGCTCTGCA-GAGG TTTAAGCTCCTCACG Pcal_0275 271581 - 272744 + | CRISPR-associated RAMP Cmr1 family protein TERM 138 273172 - 273152 - g 71 -10.4 -3.53811 | gap 1 GCCAGCTCCCTCAAA GGCG-CGGC CAGG GCCGCCGCC GTCAGCCCGCTGTGC Pcal_0276 272735 - 273529 + | CRISPR-associated RAMP Cmr6 family protein Pcal_0277 273526 - 275220 + | hypothetical protein Pcal_0278 275778 - 275203 - | hypothetical protein Pcal_0279 276966 - 276130 - | hypothetical protein Pcal_0280 277053 - 277640 + | hypothetical protein TERM 139 278145 - 278166 + F 77 -10.1 -3.65034 | TCCGCAGAAAGTGTG CACATCGGC GTTT GCCGCTGTG TTGTATGTCGTATTT Pcal_0281 278253 - 278681 + | hypothetical protein Pcal_0282 279448 - 278849 - | PaREP1 domain-containing protein Pcal_0283 279992 - 281170 + | aminotransferase Pcal_0284 281765 - 281184 - | hypothetical protein Pcal_0285 282291 - 281833 - | vitamin K epoxide reductase Pcal_0286 282332 - 283141 + | radical SAM domain-containing protein Pcal_0287 283148 - 283393 + | hypothetical protein Pcal_0288 283416 - 283643 + | hypothetical protein Pcal_0289 284696 - 284286 - | PaREP1/PaREP8 domain-contain protein Pcal_0290 285263 - 284796 - | PaREP1/PaREP8 domain-contain protein TERM 140 285058 - 285044 - G 78 -9.2 -4.08216 | CTATGGCGTTTAAAA GAGCCG CCA CGGCCC CCCAGTACTTCTCCC TERM 141 286042 - 286065 + G 74 -8.1 -4.13748 | overlap 286045 GTGATTCCGTGGGTC GGAGGCGCC ATTGCC GGCGTCTTC TTTGGTCTTTTTGCG Pcal_0291 285502 - 286146 + | hypothetical protein Pcal_0292 287408 - 286143 - | citrate transporter Pcal_0294 287899 - 288063 + | 30S ribosomal protein S30e Pcal_0295 288563 - 288060 - | bacterio-opsin activator Pcal_0296 288657 - 288983 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 142 289001 - 289017 + F 75 -5.1 -4.59109 | TTTTTACCCAAGCCC CCCAC TTTTTCC GTGGG TTTTTGCAAACTCTG Pcal_0297 289013 - 290104 + | radical SAM domain-containing protein Pcal_0298 291255 - 290101 - | hypothetical protein TERM 143 290740 - 290758 + g 75 -10.2 -3.70902 | CTTCACCACCGCGGG GGCGTTGG GGA CCCACGCC TTTACGTATAACGAC TERM 144 291064 - 291085 + g 75 -4.3 -4.82901 | gap 1, opp_overlap 291021, overlap 291062 GAAGTGGCTGAGGAC GTGGGCGAGG CCG CC-CGCCAGC TTTTTGTCAAAGCCA Pcal_0299 292622 - 291252 - | DNA repair helicase RAD25 Pcal_0300 293479 - 292613 - | ornithine cyclodeaminase TERM 145 292984 - 293009 + g 72 -9.8 -3.63922 | gap 1, opp_overlap 292963 292968, overlap 292972 292983 CGCTGCCGAGCGCCT CGGCG-TGTGT AACAG ACACAGCGCCG TATTTTGCCGCCAGT Pcal_0301 294145 - 293501 - | hypothetical protein Pcal_0302 294159 - 294668 + | abortive infection protein Pcal_0304 296679 - 295228 - | radical SAM domain-containing protein Pcal_0305 296712 - 297149 + | hypothetical protein Pcal_0306 297204 - 297590 + | SSU ribosomal protein S24E Pcal_0307 297593 - 297790 + | 30S ribosomal protein S27ae Pcal_0308 297763 - 298782 + | metalloendopeptidase glycoprotease family Pcal_0309 298811 - 299137 + | hypothetical protein Pcal_0310 299142 - 299432 + | hypothetical protein Pcal_0311 300568 - 299387 - | radical SAM domain-containing protein TERM 146 300737 - 300705 - g 70 -3.9 -4.56597 | opp_overlap 300713, overlap 300706 300707 TGGCTTTGTGAAAAA TCCCCCGTGGACGGG GTG CCCATCCTCCTTGGA GAACCCATTGGGGAA TERM 147 300954 - 300972 + G 71 -8.1 -4.07568 | gap 1 GCCGTGGTCGTGGAG GC-CGGCG ACGT CGCCGAGC TTTTGAACAAGGCGA Pcal_0312 300639 - 301328 + | hypothetical protein TERM 148 301496 - 301474 - g 78 -4 -5.02074 | overlap 301475 301477 CGAGGTGGGAAAAAA CGACGCCC TTTTGGT GGGCGGCA AGGGGGCTAACCTCG Pcal_0313 301436 - 303865 + | phosphoenolpyruvate synthase TERM 149 303897 - 303884 - f 71 -9.5 -3.53012 | CGCTTGTCTCTCAAA CCGGC CAGC GCCGG TTAAGGCTTAAATTT Pcal_0314 303931 - 304644 + | potassium transport membrane protein Pcal_0315 305263 - 304634 - | TrkA domain-containing protein TERM 150 306417 - 306389 - g 75 -11.7 -3.31144 | CGCTCAGGCTCATAA CTCCAGGCCCC AGCCTGG GGGGCGTGGAG AGCATAGCCACATAT Pcal_0316 305344 - 306576 + | cystathionine gamma-synthase TERM 151 307258 - 307315 + G 71 -12.7 -2.61144 | gap 1, opp_overlap 307277, overlap 307258 CTGTGGGCAACTGGC TCGCCGAAGCCGTG-AGACACTTCGGCG AGG TGCCGAGCCCTCTGTACGGCTACGGCGA ATATTTGGACAATAG Pcal_0317 306573 - 307706 + | hypothetical protein Pcal_0318 308001 - 307699 - | hypothetical protein TERM 152 307819 - 307839 + g 74 -7.6 -4.23758 | AAAGTAGAGGCGGTC GTCGAGGT CCCAC ACCTTGAC TTTTCCGTATGCGAT Pcal_0319 308264 - 307998 - | hypothetical protein Pcal_0320 308772 - 308266 - | hypothetical protein TERM 153 308615 - 308635 + g 77 -8.1 -4.3739 | GTCTGGAGGGTGAGC GGCCGCGGC GAC GACGCGACC TTTTCTGCCGCAATA TERM 154 308725 - 308701 - G 83 -14.3 -3.15544 | opp_overlap 308723, overlap 308703 CTGCATCGCCAGCAA CACCGCGGC GACCACG GCCGCGGTG GCGGCGGTAGACGCC TERM 155 308744 - 308703 - G 91 -17.9 -3.14051 | opp_overlap 308723, overlap 308701 GCATCGCCAGCAACA CCGCGGCGACCACGGCCGC GGTG GCGGCGGTAGACGCCGCAA CTAGTATGAGGTACC Pcal_0321 311699 - 308760 - | hypothetical protein TERM 156 310888 - 310853 - G 79 -5.4 -4.72272 | gap 1 TTGGCTTACCAAAAA CGGCGCGGGAAATATAC AGC GGA-ATTTCGCGCGGCG GCGCCAGTTCGACAG Pcal_0322 312395 - 311730 - | hypothetical protein Pcal_0323 312747 - 312397 - | hypothetical protein Pcal_0324 313223 - 312744 - | hypothetical protein TERM 157 313110 - 313126 + g 70 -3.6 -4.67353 | overlap 313083 313112 ATCGCCTGCCGGCGC AAGCGG CGACT CCGCTA TTTTTACCTCAATAA Pcal_0325 314208 - 313252 - | hypothetical protein TERM 158 313878 - 313858 - G 90 -10.5 -4.58466 | GGCATAAGCAGAAAA CCTAAGTGG TAG CCACTTAAG CCACAGCCATGTCGT Pcal_0326 314686 - 314240 - | hypothetical protein Pcal_0327 315913 - 314717 - | hypothetical protein TERM 159 314826 - 314809 - G 74 -2.5 -4.91109 | overlap 314811 TTGGGATTAGAAAAA CTGCGAC ATAT GACGCCG TGACGAGGGACAGTC TERM 160 315144 - 315165 + g 78 -8.7 -4.19238 | gap 1, opp_overlap 315140 315143 GAGGGGATATAGTAG CCGTAGGCCA CCT TGGCC-GCGG TTTTAAACTTAGACG TERM 161 315952 - 315942 - R 79 -4 -5.14965 | opp_overlap 315942 AGGGGGAGGAAAAAA CTTA GAC TAAG TTTGAAAGCACCTCG Pcal_0328 316281 - 315943 - | hypothetical protein Pcal_0329 316507 - 316268 - | hypothetical protein Pcal_0330 318067 - 316538 - | type II secretion system protein Pcal_0331 318768 - 318064 - | hypothetical protein Pcal_0332 319064 - 318765 - | hypothetical protein Pcal_0333 319647 - 319057 - | hypothetical protein Pcal_0334 320342 - 319644 - | hypothetical protein TERM 162 320085 - 320049 - G 74 -13 -2.87132 | gap 1, overlap 320082 GTCGTTTTTTACATA CGGCCACG-CCGCCCTG GCCC CAGGGTGGACATAGCCG CCCTCGGCAAAGAGG Pcal_0335 320649 - 320870 + | hypothetical protein Pcal_0336 320883 - 321485 + | hypothetical protein Pcal_0337 322102 - 321689 - | UspA domain-containing protein Pcal_0338 322568 - 322131 - | signal-transduction protein Pcal_0339 323810 - 322608 - | major facilitator transporter TERM 163 323351 - 323338 - G 75 -9.5 -3.93038 | GAGTCCAAGAGGAAA CCGCC CACC GGCGG GAGGAAAAGCCAGGG Pcal_0340 323906 - 324565 + | hypothetical protein Pcal_0341 325385 - 324651 - | hypothetical protein TERM 164 325355 - 325337 - G 75 -10.2 -3.68222 | overlap 325349 CGCCAACTCCAATAA GGGGACCC AGA AGGCCCCC CAAGAGGCCTGCCAG Pcal_0342 325491 - 325667 + | preprotein translocase subunit SecG Pcal_0343 328100 - 326319 - | hypothetical protein Pcal_0344 328795 - 329931 + | hypothetical protein TERM 165 330329 - 330316 - g 72 -4.5 -4.64598 | gap 1, opp_overlap 330319 TAAGGAGGGTAAAAA GC-GGC GAG GCCTGC ATCGCTCTGGTGGAG TERM 166 330394 - 330360 - g 79 -12.9 -3.4285 | gap 1, opp_overlap 330359 330358, overlap 330384 CTATTTAATGGAGAA GCCGTGGCCGCCCTTC TGCG GAAAGTCGG-CACGGC GATTGTGGAGAGGTT Pcal_0345 329934 - 330422 + | hypothetical protein TERM 167 331133 - 331150 + G 71 -10.5 -3.51934 | overlap 331134 331134 GCGTGGCCGCCGCCC TGGCGGC TCTG GCCGCCG TCTTTGTCAAAGGGA TERM 168 331134 - 331149 + G 70 -11.8 -2.70946 | overlap 331133 331134 CGTGGCCGCCGCCCT GGCGGC TCTG GCCGCC GTCTTTGTCAAAGGG Pcal_0346 330448 - 331389 + | transcriptional regulator, TrmB Pcal_0347 332983 - 331373 - | TrkA domain-containing protein Pcal_0348 334728 - 333457 - | major facilitator transporter TERM 169 333785 - 333746 - G 71 -10.7 -3.59087 | gap 1 AAGAGGACCGCCAAA TAGGCC-CACTGCGGCGC CCCGT GCACCACCGCGAGGCCTA CCGCAGTGGCAAAGC TERM 170 335477 - 335467 - g 70 -4.6 -4.48583 | overlap 335469 AAGCAACAGAATAAA CGGC ACG GCCA TCAGCCTAAAGACGG Pcal_0349 334853 - 335770 + | hypothetical protein Pcal_0350 335940 - 336866 + | dihydrodipicolinate synthase Pcal_0351 336866 - 337516 + | hypothetical protein Pcal_0352 338361 - 337513 - | hypothetical protein Pcal_0353 339152 - 338358 - | 5'-nucleotidase / 3'-nucleotidase / exopolyphosphatase TERM 171 338451 - 338474 + g 75 -8.8 -4.07885 | GAGGTTGAGCGCCAA GGGGGTTACG GCCA CGTTACCCTC TTTTAACACCACGTA rps10p 339548 - 339228 - | 30S ribosomal protein S10P Pcal_0355 339604 - 340758 + | peptide chain release factor 1 Pcal_0356 342936 - 340834 - | SMC domain-containing protein Pcal_0357 344086 - 342929 - | metallophosphoesterase TERM 172 343085 - 343064 - G 74 -11.5 -3.55071 | CCAGATCTCCTCAAA GGCAGCCCC CCTG GGGGCCACC GCCCTCTGGATCCCC Pcal_0358 345900 - 344083 - | hypothetical protein TERM 173 344256 - 344295 + g 75 -9.2 -3.85698 | gap 1, overlap 344282 344283 TGGCCAAGACTCTCA TAGCCGCCGCTGCTACGGC CAC GCT-TGGGGGCGGCGGCGA TTTGTACAGCCGGCG TERM 174 345345 - 345373 + g 75 -5.3 -4.57569 | GGACGTACTCGCCGT GGGGGTCAA TCACGACTATC TTGGCCCCC TTTTTCAACAACTCC Pcal_0359 347252 - 345897 - | hypothetical protein TERM 175 346096 - 346067 - G 71 -7.8 -4.07687 | gap 1, overlap 346068 ACTGCTGCGCCAAAA GCGCCGCGAC-GT CGTCT ACAGCCGCGGCGG GGTAGAAGGCCTTGA Pcal_0360 347317 - 348423 + | ATPase TERM 176 349578 - 349593 + G 77 -11.8 -3.54424 | opp_overlap 349577 349578 CCCAGAGGCGATAAG GGCGGC GAAG GCCGCC TTTAGAGAGGTGAAG Pcal_0361 348427 - 349716 + | hypothetical protein Pcal_0362 349740 - 350159 + | signal-transduction protein TERM 177 350226 - 350248 + G 81 -11.2 -3.79747 | ATAGCCCTGGCGATA GTCGCGGCGA TCG TGGCCGCGGC TTTAATCCTAACTCA Pcal_0363 350190 - 351419 + | hypothetical protein Pcal_0364 352177 - 351416 - | binding-protein-dependent transport systems inner membrane component Pcal_0365 352905 - 352174 - | binding-protein-dependent transport systems inner membrane component Pcal_0366 353885 - 352902 - | ABC transporter related Pcal_0367 353933 - 354508 + | hypothetical protein Pcal_0368 356024 - 354735 - | argininosuccinate lyase Pcal_0369 356196 - 356038 - | hypothetical protein TERM 178 356166 - 356183 + g 74 -2.6 -5.02074 | overlap 356167 TCACGGGTTTTTTGC ACGTGG GACAGA CCACGG TTTTTTGCCCCATCG Pcal_0370 357273 - 356245 - | argininosuccinate synthase Pcal_0371 357627 - 357442 - | putative lysine biosynthesis protein Pcal_0372 358482 - 357697 - | acetylglutamate kinase argC 359534 - 358479 - | N-acetyl-gamma-glutamyl-phosphate reductase Pcal_0374 360031 - 359531 - | hypothetical protein Pcal_0375 360378 - 361421 + | threonine synthase Pcal_0376 361418 - 362308 + | homoserine kinase Pcal_0377 362305 - 363297 + | aspartate kinase Pcal_0378 363314 - 364336 + | aspartate-semialdehyde dehydrogenase Pcal_0379 364333 - 365259 + | homoserine dehydrogenase TERM 179 367122 - 367109 - g 74 -8.1 -4.21974 | CGACGAGGTAATAAA GGTGG CTGG CCACC GCTTAGGCACGTACG Pcal_0380 365502 - 367508 + | acetyl-CoA synthetase Pcal_0381 367505 - 369571 + | CBS domain-containing protein Pcal_0382 370418 - 369582 - | pantothenate kinase Pcal_0383 371245 - 370403 - | 2-dehydropantoate 2-reductase TERM 180 370442 - 370454 + g 71 -10.5 -3.61398 | opp_overlap 370442 370441 CGCGGCTTTCACAAG GGCCC ACA GGGCC TTGTTCACGGGCGCC Pcal_0384 372009 - 371242 - | hypothetical protein Pcal_0385 372392 - 372033 - | DNA polymerase beta subunit Pcal_0386 372697 - 372521 - | hypothetical protein Pcal_0387 373037 - 372732 - | SirA family protein TERM 181 372797 - 372822 + g 78 -9.7 -4.07568 | overlap 372798 GATAAAGAGCTTTCT TCACTGTCCAC GTCC GTGGACAGCGG TTTTGCCAGGGGCAA Pcal_0388 373418 - 373092 - | hypothetical protein Pcal_0389 373950 - 373465 - | Ferritin, Dps family protein Pcal_0390 374003 - 374488 + | PaREP1 domain-containing protein TERM 182 375190 - 375202 + G 70 -4.1 -4.6644 | GCTGGCTTCCGCACT TGGTG TTG CACTA TTTTTAGAGTCTATT Pcal_0391 375119 - 375580 + | hypothetical protein Pcal_0392 376445 - 375756 - | formate dehydrogenase delta subunit Pcal_0393 377007 - 376420 - | hypothetical protein Pcal_0394 377710 - 376991 - | formate dehydrogenase gamma subunit Pcal_0395 378568 - 377741 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pcal_0396 382098 - 378571 - | formate dehydrogenase alpha subunit Pcal_0397 382905 - 382516 - | hypothetical protein Pcal_0398 383001 - 383399 + | hypothetical protein Pcal_0399 383423 - 383635 + | hypothetical protein TERM 183 383842 - 383856 + F 75 -11.4 -3.02144 | overlap 383844 GGCTGGGGTACTGGG GAGCCG TGG CGGCTC TCTTAAACGCAGTGG Pcal_0401 384190 - 384750 + | flavin reductase domain-containing protein Pcal_0402 385955 - 384708 - | VWA containing CoxE family protein TERM 184 384762 - 384744 - G 90 -10.2 -4.56775 | AGTGTTTGCCAAAAA GCCGTAGG CCG CCTGCGGC GCGGCGGCTGCAAGA TERM 185 385311 - 385284 - G 79 -13.4 -3.14344 | opp_overlap 385284 GAGCGCCCCCACGAA GAGGGCCCTGGC GTAT GCCACAGCCCTC TTAACTCTGGCAAAA Pcal_0403 386363 - 385986 - | hypothetical protein Pcal_0404 386436 - 387650 + | DegT/DnrJ/EryC1/StrS aminotransferase Pcal_0405 388873 - 388001 - | TatD-related deoxyribonuclease TERM 186 388267 - 388232 - G 81 -12.6 -3.53224 | gap 1, overlap 388260 CAGCGCCTCCTCAAA CTCGCCCCTCCT-CCCC AAG GGGACAGAAGGGGAGAG GCCCCTAGACCACGC Pcal_0406 390135 - 389128 - | AAA ATPase TERM 187 390256 - 390279 + r 78 -8.1 -4.42974 | CTCTAGGTCAACGTT GGCGAGCCT GATGTA GGGCTTGCC TTTGTTGTGTCTCAC Pcal_0407 390848 - 390453 - | hypothetical protein Pcal_0408 391615 - 391274 - | emp24/gp25L/p24 TERM 188 391685 - 391675 - H 83 -5.4 -5.1286 | GAAAAACGAGAAAAA CAGT ACG ACTG CTACAATAATTGCAA Pcal_0409 391753 - 393384 + | hypothetical protein TERM 189 393368 - 393397 + F 73 -11.5 -2.82505 | overlap 393367 GAGTATTAATCGGGA GGGCGAAAAAAGC GTAA GTTTTTGTCGCCC CTTTAAGTATCCGCT TERM 190 393781 - 393761 - f 81 -10.3 -3.94381 | ATATAACTCCATAAA GCCCCGGCG CGG CGCCTAGGC CAGCCCACGACGCGT Pcal_0410 393946 - 394314 + | hypothetical protein Pcal_0411 394298 - 395482 + | putative ATP binding protein TERM 191 395514 - 395504 - f 78 -5.4 -4.75288 | CGATAGTAAAATAAA TAGG TCC CCTA TCCACACTGTGGAAG Pcal_0412 395523 - 395879 + | helix-turn-helix, type 11 domain-containing protein TERM 192 395884 - 395872 - f 76 -10.5 -3.40522 | opp_overlap 395876, overlap 395851 395844 AGCGCCTGATTACAA GGCCC TGA GGGCC TCGGCGTAAGAGCCG Pcal_0413 396026 - 397549 + | transglutaminase domain-containing protein Pcal_0414 397546 - 398442 + | hypothetical protein Pcal_0415 399341 - 398433 - | ATPase TERM 193 398523 - 398535 + g 72 -4.7 -4.63928 | overlap 398522 398524 TCTGTGGCTGAGCAC CGCCG CGG CGGCC TTTTTCACGTCGTCT Pcal_0416 399378 - 400298 + | hypothetical protein Pcal_0417 400295 - 400774 + | hypothetical protein Pcal_0418 400816 - 400974 + | paREP10 Pcal_0419 402089 - 401277 - | hypothetical protein TERM 194 402748 - 402760 + G 76 -4.7 -4.72986 | overlap 402738 402734 402733 402730 GGCCACGGTGGAGCT CGCCG TTG CGTCG TTTTTAGTGAGCGTA TERM 195 402783 - 402796 + G 70 -3.8 -4.58395 | TGAGCGTAGCGCTTG GCCA CTTGTT TGGC TTTTTGGCGGCTAGG TERM 196 403336 - 403361 + G 74 -6.9 -4.32034 | gap 1, opp_overlap 403338, overlap 403336 403338 ACAGTACCTCGACTA C-ACCACTGTAC AGG GGACAGTGGTCG TTTTCGTCGTCATAG Pcal_0420 402434 - 403447 + | binding-protein-dependent transport systems inner membrane component Pcal_0421 403447 - 404235 + | binding-protein-dependent transport systems inner membrane component Pcal_0422 405819 - 404242 - | extracellular solute-binding protein Pcal_0423 405932 - 407089 + | major facilitator transporter TERM 197 407102 - 407113 + T 72 -7.2 -4.19177 | TAGCTCCGTATCCTC CCCC TCCT GGGG TTTCTATTACCACCT Pcal_0424 408623 - 407079 - | 5-oxoprolinase (ATP-hydrolyzing) Pcal_0425 410563 - 408620 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 198 410171 - 410182 + g 70 -3.6 -4.58395 | overlap 410168 CGTAGACACCTCGGC CGGG TCGA CCTG TTTTTCCACAGTGCC Pcal_0426 411792 - 410560 - | major facilitator transporter TERM 199 411703 - 411682 - G 78 -6.5 -4.64766 | gap 1 CTTAGATGGGAAAAA GGCG-GCTCC CAC GTAGCTCGCC GCTACTGCGAACAAA TERM 200 411934 - 411959 + r 86 -13.9 -2.84098 | overlap 411946 411955 ACTCCGACCCCCTCC TCCGCCCCAGG TTGC CCCGGGGCGGG TCATTGGTTCCCCGC Pcal_0427 413243 - 412104 - | IS605 family transposase OrfB TERM 201 413580 - 413565 - H 77 -6.8 -4.57073 | GACGGCGTGTAAAAA CGGCGT AGCG ACACCG CCAACTTGCAACCAA Pcal_0428 413637 - 413900 + | hypothetical protein TERM 202 413892 - 413907 + F 84 -3.9 -5.20216 | overlap 413878 TACCAACTCGAAGAG GTGGG TTAGCT CCCGC TTTTTTCCTCCTATC TERM 203 415135 - 415101 - g 77 -13.6 -2.91264 | opp_overlap 415086 415085, overlap 415086 GTGCCTAGGTACATA CTGTACCTCCGCGCCT TTG AGGAGAGGAAGTACAG CCCTGGCACTATGTT TERM 204 415714 - 415697 - g 78 -9.9 -4.04206 | CGACTTTTACACAAA GACACGT TTAA ACGTGTC TGCGTCAGATGTGGA TERM 205 416160 - 416181 + G 70 -3.7 -4.57341 | gap 1, opp_overlap 416151, overlap 416160 416162 GACAAGCCCTATTCG CC-GCAGAAT AGG ATTCAGCTGG TTTTTGACAGAGATT Pcal_0429 413949 - 416753 + | hypothetical protein Pcal_0430 416807 - 417361 + | zinc finger TFIIB-type domain-containing protein TERM 206 417531 - 417503 - f 80 -11.7 -3.31144 | CGCTCAGGCTTATAA CTCCAGGCCCC AGCCTGG GGGGCGTGGAG AGCATAGCAACATAC TERM 207 418159 - 418180 + F 76 -10.8 -3.34894 | overlap 418170 GGCGCCCCCTTATAT GGCGTGGC GATGTG GCCGCGCC TCTTTCCGCCCCATT TERM 208 418259 - 418272 + F 81 -9.5 -4.11216 | opp_overlap 418259 418258 TTTCTTTCGTCAAAG CGGCG CCGA CGCCG TTTTAAGCGTAAAAC Pcal_0432 418585 - 418920 + | DNA-directed RNA polymerase, subunit F Pcal_0433 418917 - 419501 + | putative nucleotide binding protein Pcal_0434 419886 - 419488 - | translation initiation factor IF-5A Pcal_0435 420916 - 420074 - | 5'-methylthioadenosine phosphorylase II Pcal_0436 421133 - 420936 - | hypothetical protein TERM 209 420972 - 420962 - G 83 -8.2 -4.63527 | TTATGACGCCAAAAA CGCC TAG GGCG CCATTCGACGGAGGT TERM 210 420991 - 421010 + g 74 -7.8 -4.18018 | overlap 420993 TTCGACGGAGGTGGG CTCGGGTT GTTA AACCCGTG TTTTCCGTAGAAGGG Pcal_0437 421220 - 421714 + | hypothetical protein Pcal_0438 421737 - 422099 + | translation initiation factor 1 (eIF-1/SUI1) Pcal_0439 422137 - 422391 + | hypothetical protein Pcal_0440 422922 - 422386 - | hypothetical protein argS 424808 - 422919 - | arginyl-tRNA synthetase TERM 211 423026 - 423006 - G 81 -12.5 -3.61103 | opp_overlap 423005 423006 TAAGGCCAGCCTAAA GCCGCGGAG CGG CTCCTCGGC CTTTAACACAGGCGC TERM 212 423006 - 423026 + g 73 -12.5 -2.71712 | opp_overlap 423006, overlap 423005 TAAGGCCAGCCTAAA GCCGCGGAG CGG CTCCTCGGC CTTTAACACAGGCGC Pcal_0442 425094 - 425282 + | 50S ribosomal protein L24E rpl7ae 425881 - 425432 - | 50S ribosomal protein L7Ae TERM 213 425540 - 425558 + g 81 -11.6 -3.85698 | opp_overlap 425536, overlap 425549 TGCCTCAATTACCAC CGCGGCCG CGG CGGCCACG TTTATCCCAGCCGCC Pcal_0444 426992 - 425913 - | inner-membrane translocator Pcal_0445 427929 - 426994 - | inner-membrane translocator TERM 214 428643 - 428627 - g 78 -9.4 -4.07124 | opp_overlap 428637 CATTATCTATAGAAA CGACGC GTGGG GCGTCG GGCTTAAAGACGCCA Pcal_0446 427998 - 429353 + | extracellular ligand-binding receptor Pcal_0447 429383 - 430147 + | ABC transporter related TERM 215 430303 - 430266 - T 77 -6.9 -4.45485 | gap 1, opp_overlap 430266, overlap 430257 430292 AGGACAGCGAGAAAA CACGCCGGGG-GTGGGAT TTG AACCCACGCCCCCGTATG GGGACGGGCTTAGCA Pcal_0448 431238 - 430375 - | aldo/keto reductase purP 432250 - 431249 - | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase TERM 216 431969 - 432023 + g 73 -2.8 -4.82901 | overlap 431952 CACTGGGGCCTCCAG CGCC-TGTCTCCACCCCACGTACTCG ACGTA TGAGC-CGTGGGGTATGAACAAGGCG TTTTTCTCCACGAGC Pcal_0450 432431 - 433435 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 217 433615 - 433653 + G 100 -14.4 -4.62783 | opp_overlap 433611 433610 433613, overlap 433617 GAGGGCAGAATCACC GGCAGGCCCGGCGTTGCC GCA GTCCACGCGGGGCCTGGC TTTTTGAACTCGCTC TERM 218 433617 - 433651 + G 81 -15.6 -2.61831 | opp_overlap 433611 433610 433613, overlap 433615 GGGCAGAATCACCGG CAGGCCCGGCGTTGCC GCA GTCCACGCGGGGCCTG GCTTTTTGAACTCGC TERM 219 434648 - 434626 - g 74 -6.9 -4.371 | opp_overlap 434625 434626 TTTATCACAGTAAAA GCAGTGAGG GGGTA CCTCGCCGC GTTTAACCTAGGCGC Pcal_0451 433432 - 435081 + | acetolactate synthase, large subunit Pcal_0452 435112 - 435771 + | hypothetical protein TERM 220 436020 - 436068 + F 76 -11.1 -3.35679 | opp_overlap 436021, overlap 436021 436035 GTCTTGCCGAGTCAA ATCAAGTATTAGACGGCGGCTAA TCG TTGGCCGCTTTCTAGTACCTGAA TTCTCACTGCGCGGC TERM 221 436021 - 436067 + F 90 -14.6 -2.61264 | opp_overlap 436021, overlap 436020 436035 TCTTGCCGAGTCAAA TCAAGTATTAGACGGCGGCTAA TCG TTGGCCGCTTTCTAGTACCTGA ATTCTCACTGCGCGG TERM 222 436067 - 436021 - f 77 -10.2 -3.64703 | opp_overlap 436020 436021 436035 TCTTGCCGAGTCAAA TCAAGTATTAGACGGCGGCTAA TCG TTGGCCGCTTTCTAGTACCTGA ATTCTCACTGCGCGG TERM 223 436035 - 436053 + F 86 -11 -3.97947 | opp_overlap 436021, overlap 436021 436020 ATCAAGTATTAGACG GCGGCTAA TCG TTGGCCGC TTTCTAGTACCTGAA Pcal_0453 436136 - 437947 + | hypothetical protein Pcal_0455 439663 - 438506 - | proteinase inhibitor I4, serpin Pcal_0456 439971 - 439735 - | hypothetical protein Pcal_0457 440871 - 441926 + | hypothetical protein Pcal_0458 443354 - 442275 - | radical SAM domain-containing protein TERM 224 442817 - 442827 + g 72 -4.6 -4.57569 | CCACATTTATGCCAA GGTC AAG GGCC TTTTTCACAAGCTCC Pcal_0459 443675 - 443397 - | HTH DNA binding domain-containing protein TERM 225 443881 - 443859 - g 74 -12.6 -2.90212 | opp_overlap 443859 TGAGGAGTTTAGATA CGCCGTGGCG GGG CGCCTCGGCA TATTAGAGGTATTAA Pcal_0460 443797 - 444435 + | hypothetical protein Pcal_0461 444617 - 444811 + | hypothetical protein Pcal_0462 444787 - 445155 + | HEPN domain-containing protein Pcal_0463 445142 - 445525 + | DNA polymerase beta subunit Pcal_0464 446076 - 445522 - | PaREP1 domain-containing protein Pcal_0466 447464 - 447961 + | hypothetical protein TERM 226 447984 - 447996 + F 78 -10.5 -3.55071 | opp_overlap 447983 CGTCATGTGGAATAT GCCGC GGA GCGGC TTTGAACAACTGTAC Pcal_0467 448088 - 448444 + | hypothetical protein TERM 227 448535 - 448555 + G 79 -12.5 -3.19789 | overlap 448537 448550 GCGCGTATGCCCTCG CCGCCGGTG TTG CACCGGCTG TTGGCTGTTAGGTCT TERM 228 448537 - 448553 + G 79 -13.7 -3.1577 | overlap 448535 448550 GCGTATGCCCTCGCC GCCGGTG TTG CACCGGC TGTTGGCTGTTAGGT Pcal_0468 448526 - 448885 + | hypothetical protein TERM 229 449041 - 449016 - f 81 -10.5 -3.5774 | gap 1 AGGTAACCTCTTAAA CTTCTACGGGCG GCA CACCCGT-GAAG AGAATCAAGCTGATC TERM 230 449699 - 449711 + G 79 -6.9 -4.60041 | GGGGGCAATCCCGAC GCCCT AGA GGGGC TTTTTGAGGCTGGGT Pcal_0469 449036 - 450052 + | hypothetical protein Pcal_0470 450129 - 451169 + | SMC domain-containing protein Pcal_0471 451181 - 451882 + | hypothetical protein TERM 231 451890 - 451871 - f 91 -10.6 -4.27192 | AAAGGCCTAGGAAAA GCGCTCGG ATAG CCGCGCGC AGAATGCTCCTTGAG Pcal_0472 451894 - 452991 + | glycosyl transferase family protein TERM 232 453044 - 452986 - f 83 -5.8 -5.02231 | GAAAAACAGGAAAAA CGCTAACCACGTGAGGGTAGTCTACG CCGCGCC CACCTACCACCCCCACGTGGGAGGCG TGGAATACGTCGTCA Pcal_0473 452996 - 454066 + | glycosyl transferase, group 1 TERM 233 454722 - 454705 - g 87 -14.1 -3.36505 | AGACCGCATTCACAA CCGCGGC AGAG GCCGCGG GGGGGCCCGCGCTGA TERM 234 455029 - 455013 - g 85 -15.1 -3.02263 | ACAGCCCTCCTAATA GCCGCGG GGC CCGCGGC TGCCGGCTGGGCCTG Pcal_0474 454068 - 455384 + | hypothetical protein TERM 235 456255 - 456241 - g 83 -7.8 -4.58283 | CAAGGCCGCCAAAAA GGCCCT CGA AGAGCC GCCGCCCCCCAAGCT Pcal_0475 455381 - 456337 + | glycosyl transferase, group 1 TERM 236 456677 - 456709 + G 71 -12.7 -2.62184 | gap 1 CAACCCCAGAGGCGG TGGCCCTCGGCGGC ACAGCC GCCGCCGCGG-CCA TCCTCTACCAAGCCC Pcal_0476 456334 - 457344 + | hypothetical protein TERM 237 457951 - 457931 - g 71 -10.4 -3.55444 | gap 1 CCGGGAGGTGGCAAA GGCC-GGCC TCTC GGCCTGGCC CAGCCAGCTGGTAGC Pcal_0477 457341 - 458657 + | hypothetical protein Pcal_0478 458645 - 459760 + | glycosyl transferase family protein Pcal_0479 459757 - 460272 + | hypothetical protein Pcal_0480 460296 - 460658 + | hypothetical protein TERM 238 461242 - 461222 - g 77 -8.3 -4.39166 | overlap 461223 CGCCACACAGCAAAA CTCGGCTAC AGA ATAGCCGAA GTGCCAGTAGAGGTG Pcal_0481 460640 - 461605 + | glycosyl transferase family protein TERM 239 461991 - 461971 - g 78 -3.1 -5.08011 | overlap 461972 461973 461986 AAAATGCTCAAAAAA GGCGACCTC CAA GGACTCGCC GAGGTCCGGAAAGAC Pcal_0482 461605 - 462423 + | hypothetical protein TERM 240 463098 - 463084 - g 77 -2.1 -5.03747 | gap 1, overlap 463088 AAACTGTGGAAAAAA GCTACG ACGC CG-AGC TGATCATTGCAGGCC TERM 241 463164 - 463149 - g 72 -5.4 -4.45083 | overlap 463159 GCCAGACTCACAAAA CTAGCC AAAA GACTAG ACCTTAGCCGCGTCA Pcal_0483 462420 - 463532 + | glycosyl transferase, group 1 Pcal_0484 463536 - 464441 + | glycosyl transferase family protein TERM 242 464937 - 464926 - g 85 -3 -5.38047 | TACCGAGATAAAAAA TACA AATA TGTA GTACTGATATTGATC TERM 243 465947 - 465937 - g 70 -2.6 -4.81852 | opp_overlap 465937, overlap 465932 TTAGAATCAATAAAA TTTT TAG AAAA TATATTAGAAAATGT TERM 244 466129 - 466114 - g 74 -2.6 -4.91285 | gap 1, opp_overlap 466114 AGTAATATAATAAAA GTTCTAG AAA CT-GAAC GTTTTGCTTTATTTA Pcal_0485 464443 - 466566 + | hypothetical protein TERM 245 467476 - 467499 + G 72 -6.1 -4.386 | ATAAGCGATCCTCGC CCTAGTCTT GTGGCA AAGATTAGG TTTTATGAAAGATTG Pcal_0487 467122 - 467976 + | glycosyl transferase family protein TERM 246 469057 - 469068 + T 72 -5.8 -4.43501 | overlap 469054 TTTCCCCCTAGAGCG CGTG GACG CACG TTTTGTAGCTAGCTT Pcal_0490 470016 - 469645 - | paREP15, putative coiled-coil protein TERM 247 469830 - 469851 + g 81 -3 -5.20783 | TTTCTCTCCTTAACT GCGCTA TCTCCTCTCT TAGCGC TTTTTCTCTTTCGGT Pcal_0491 470998 - 471537 + | PaREP1 domain-containing protein TERM 248 471538 - 471555 + T 77 -8.4 -4.07687 | GAGGTGGCTAGGTAG CGCGAC TGGGGT GTCGCG TTTTGCCAGCGCCGT TERM 249 471593 - 471621 + T 71 -9.5 -3.53012 | overlap 471588 471587 GCGTTGTTTGGCGAA GCTGGGCTTGGCG TTT CGCTAGGCGTAGC TTTGGGGAGGGGGCG Pcal_0492 472382 - 471693 - | hypothetical protein Pcal_0493 473704 - 472412 - | hypothetical protein TERM 250 473500 - 473513 + g 90 -6.7 -5.28176 | opp_overlap 473491 473500, overlap 473491 473498 473496 CAAAATCTACATAGA GGTAG TCTT CTACC TTTTTTATCAGTGAG Pcal_0494 473780 - 474169 + | hypothetical protein TERM 251 474529 - 474543 + F 73 -11.4 -2.57132 | overlap 474528 474540 CCTCCTAGCGAGTGT CGGCCA CTG TGGCCG CTTGTCAAAGGCGCG Pcal_0495 474681 - 475079 + | putative transcriptional regulator Pcal_0496 475103 - 476002 + | hypothetical protein TERM 252 476645 - 476663 + G 71 -8.1 -4.08216 | gap 1, opp_overlap 476645, overlap 476645 476647 GCCGCCATTGTAATA GG-GGGCG ACCC CGCCCTCC TTTTAAGCGGCATGA Pcal_0497 476027 - 477475 + | 3-octaprenyl-4hydroxybenzoate decarboxylase TERM 253 477698 - 477677 - g 82 -10.1 -4.13014 | opp_overlap 477695 GGCATACGCCGAAAA CGCCGCG GCGCAGTA CGCGGCG TCCCGCCTATATGTA Pcal_0498 477456 - 478094 + | hypothetical protein Pcal_0499 478122 - 479570 + | lysyl-tRNA synthetase Pcal_0500 481072 - 479579 - | glycosyl transferase family protein TERM 254 480015 - 479983 - G 70 -3.9 -4.63218 | TTGGGGGCAATAAAA TGCCTGCGTACCCCA TTG CGAGGCCCGCCGCCA TAATTGCAAAAGTTG TERM 255 480086 - 480070 - G 70 -2.2 -4.84359 | overlap 480072 CTACGTTTAGAAAAA GACTCA ACTTG TGAGAC TTGGGCATTTTCAGA Pcal_0501 481151 - 481891 + | thymidylate synthase, flavin-dependent Pcal_0502 481866 - 482717 + | hypothetical protein TERM 256 482748 - 482783 + F 100 -13.4 -4.46072 | gap 2 CAGGCCGTCTCACAG CGCCGCAGACGCGGCT CTCGAC AGCC-CGTC-GCGGCG TTTATATTTGTTGGC TERM 257 482977 - 482934 - g 75 -5.9 -4.57569 | overlap 482975 TGACCTGCTGAAAAA GGCCTTCGGCGATCTACCC TTCGTC GTGGAAATCTACGAAGGCC ACCACGGCAACCCGA Pcal_0503 482824 - 483216 + | hypothetical protein Pcal_0504 483487 - 483188 - | hypothetical protein Pcal_0505 484004 - 483480 - | hypothetical protein Pcal_0506 484983 - 484084 - | SSU ribosomal protein S6P modification protein TERM 258 484495 - 484467 - G 75 -11.7 -3.2818 | opp_overlap 484476, overlap 484465 CCAACATGGAGAATA TGTGGAAGGCCAC GTC GGGGTCTTCCACA AGAAAGGCGCCGTAG TERM 259 484804 - 484761 - G 70 -3.6 -4.60924 | gap 1, overlap 484762 484780 CAAAGTCTCTAAAAA TGCCCAAGTGGCGCAACAACG CCC CGTCGA-GCTCCACGGGGGCC GGCGCCTCTCTGCCT Pcal_0507 485386 - 485006 - | hypothetical protein Pcal_0508 485446 - 486171 + | hypothetical protein Pcal_0509 486363 - 486581 + | hypothetical protein Pcal_0510 487903 - 486578 - | 4-aminobutyrate aminotransferase Pcal_0511 488729 - 488022 - | short-chain dehydrogenase/reductase SDR folE 489301 - 488726 - | GTP cyclohydrolase I TERM 260 488998 - 488978 - G 76 -12.5 -3.07113 | TATCACCTTACTCAA CCCGGGCAC GCC GTCCCCGGG CACGTAGGCCACCGA Pcal_0513 490231 - 489326 - | hypothetical protein TERM 261 490771 - 490800 + G 71 -10.6 -3.48276 | ACGTGGGTTCTGCCC GGCGGCGTGAGG ACCGCG CCTCCCGACGCC TTCTATGAACAGACG Pcal_0514 490249 - 491466 + | NADH dehydrogenase subunit D TERM 262 491523 - 491533 + G 81 -3.2 -5.32882 | GTCTCCTCTTCTCGG CTAG GCT CTGG TTTTTTGTACTGATG TERM 263 491726 - 491700 - g 70 -12.2 -2.84794 | opp_overlap 491697 491696, overlap 491697 TTAAGTTCATAATTA GCGAGCCCATTG TGC CAAGGGGCGCGC ATAAGTTGCTTTTCA Pcal_0515 491495 - 492520 + | NADH dehydrogenase subunit H Pcal_0516 492517 - 492984 + | NADH dehydrogenase subunit I TERM 264 493235 - 493217 - g 70 -12.4 -2.82623 | overlap 493214 TGCTTGTGATAATGA CCGCCGCA ATG TACGGCGG CGTGCAGAGGCAGGG Pcal_0517 493015 - 493440 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 Pcal_0518 493437 - 493730 + | NADH-ubiquinone oxidoreductase, chain 4L TERM 265 493932 - 493946 + G 91 -7.8 -5.0916 | opp_overlap 493932, overlap 493918 493933 TGGCATTTAGAATTA TGCCGT TTA ACGGCG TTTTTATATTCACAG Pcal_0519 493727 - 495157 + | NADH dehydrogenase (quinone) TERM 266 496669 - 496683 + G 79 -7 -4.69027 | ACGGAGGCCTTAGTC GCCGTG CTC CTCGGC TTTTTAACTGGCTTT Pcal_0520 495148 - 497010 + | NADH dehydrogenase (quinone) Pcal_0521 497007 - 498242 + | NADH/ubiquinone/plastoquinone (complex I) TERM 267 498586 - 498612 + F 70 -3.7 -4.61873 | gap 1, overlap 498589 TTCACAGAGCTACGT GGA-GCAGACGC CTTG GTCTCTGCCTCC TTTTCCTTTGTAAAA TERM 268 498994 - 499006 + F 81 -6.3 -4.74801 | opp_overlap 498994 TCTGCACAGTGGAAA GTATG GGG CATAC TTTTTCCTAACATTA Pcal_0523 499051 - 499599 + | nucleoside diphosphate kinase Pcal_0524 499985 - 499596 - | hypothetical protein Pcal_0525 501133 - 500114 - | putative ATP binding protein TERM 269 501259 - 501282 + G 70 -11.8 -2.73159 | gap 1, opp_overlap 501251, overlap 501258 TGAAAATTTGCCAGA GCTC-GTGGAG AGA CTCCACAGAGC CTTTGGCGGCGTTGG Pcal_0526 501224 - 502246 + | dolichyl-phosphate beta-D-mannosyltransferase TERM 270 502365 - 502377 + F 74 -3.4 -4.91285 | overlap 502370 CGGAAACCCGTCCTA CCTT TGGAT AAGG TTTTATTCTCTTGGT TERM 271 502949 - 502963 + G 74 -11.4 -3.57309 | AGTTGAGACAGTGCC GTCCCC CGT GGGGAC TTTGGAGGCGTTTTA Pcal_0527 502404 - 503447 + | saccharopine dehydrogenase TERM 272 504167 - 504184 + G 75 -9.8 -3.91032 | ATTGACAAGGAGCTT GGCGGC TTCTAC GCCGCC TTTGTAAAATACTTA Pcal_0528 503444 - 504709 + | histidyl-tRNA synthetase Pcal_0529 505628 - 504732 - | carbamate kinase Pcal_0530 506731 - 505649 - | major facilitator transporter TERM 273 506434 - 506423 - G 75 -3.6 -4.85599 | CGCAGTTGAGAAAAA GAGG CCAG CCCC CACGCCCCCCAACGC Pcal_0531 507164 - 506778 - | hypothetical protein TERM 274 507485 - 507505 + G 71 -12.5 -2.62184 | overlap 507495 CGGCTTGGCCAGACC CCGCCACTG CCG CCGTGGCGG TGGTCTCCAACGGCG TERM 275 507853 - 507891 + G 100 -18.2 -3.05463 | overlap 507865 GTTTTTGCAGATTTA GTCGAGCAGGGGGTCGTG AGC CACGGCTTCCTCCTCGAC TTGGCTCAGCCAAGT Pcal_0532 507175 - 508008 + | hypothetical protein Pcal_0533 508811 - 507981 - | Sec-independent protein translocase TatC Pcal_0534 508914 - 509216 + | Sec-independent protein translocase TatA TERM 276 509220 - 509207 - T 81 -6.7 -4.62069 | CGCCGAGCTTAAAAA GACTC AGTA GAGTC AGCCCGTCGTCAGTT Pcal_0535 510074 - 509253 - | hypothetical protein TERM 277 509800 - 509815 + g 90 -11.8 -4.11394 | TATCCAATTGTCACT GCGGCG GCAA CGCCGC TTTTAGAAATGGCGT Pcal_0536 510240 - 510064 - | CopG/Arc/MetJ family transcriptional regulator Pcal_0537 511273 - 510254 - | FAD dependent oxidoreductase Pcal_0538 512033 - 511311 - | hypothetical protein Pcal_0539 512622 - 512005 - | beta-lactamase domain-containing protein Pcal_0540 512670 - 513911 + | cytochrome c biogenesis protein, transmembrane region Pcal_0541 513908 - 514405 + | dual specificity protein phosphatase Pcal_0542 515179 - 514742 - | molybdopterin-guanine dinucleotide biosynthesis protein B Pcal_0543 515478 - 515176 - | PadR family transcriptional regulator Pcal_0544 516530 - 515475 - | myo-inositol-1-phosphate synthase TERM 278 515523 - 515550 + g 72 -4.7 -4.56597 | overlap 515521 CACCGCTCTGTAGGC CTCGTCGGGGC TCATGT GCACTGGCGGG TTTTTGAAGCCCCAG TERM 279 515724 - 515737 + g 86 -6.7 -4.96848 | TATCTCAGCCTCAAT TAGCG TATG CGCTA TTTTTCTATCCCCCA Pcal_0545 518332 - 516566 - | hypothetical protein Pcal_0546 519016 - 518375 - | CRISPR-associated exonuclease Cas4 family protein Pcal_0547 520559 - 518997 - | translation elongation factor 1A GTP binding subunit TERM 280 520382 - 520410 + g 74 -11.6 -3.54129 | opp_overlap 520378 520377 ACTTAAACAACTCGT CGTCGGGAAGCC CGAGA GGCCTCCCGTCG TTTGAAACGCCTATG hppA 522735 - 520579 - | membrane-bound proton-translocating pyrophosphatase TERM 281 521753 - 521733 - G 72 -8.9 -3.79906 | TTATTTTGACAATAA TGGGGGCCA GCG CGGCGCCCA AAGAAGCCGCGGCCG TERM 282 521762 - 521781 + g 71 -10.6 -3.55071 | opp_overlap 521759 GCGCCCAAAGAAGCC GCGGCCGC GAGC GCGGCGGC TTTCGCAAAGTCTAG TERM 283 524520 - 524536 + G 80 -10.1 -3.97834 | opp_overlap 524519 TCGACGGCGTAAAGG CGTCGCT GGC AGCGGCG TTTCTGCTGGGGTTC Pcal_0549 522833 - 525130 + | V-type ATPase, 116 kDa subunit Pcal_0550 525130 - 525804 + | hypothetical protein Pcal_0551 526027 - 525785 - | hypothetical protein Pcal_0552 526263 - 526024 - | ribosomal protein L29 TERM 284 526304 - 526327 + r 76 -8 -4.29304 | TAAAATTATTGGGCG GCGGCCTCCG GCCT CGTAGGCGGC TTTATCTTATACTCG rps3p 526956 - 526294 - | 30S ribosomal protein S3P Pcal_0554 527726 - 527031 - | hydrolase Pcal_0555 528583 - 527711 - | UbiA prenyltransferase rpl22p 528645 - 529151 + | 50S ribosomal protein L22P Pcal_0557 529609 - 529148 - | hypothetical protein Pcal_0558 530504 - 529659 - | TM helix repeat-containing protein TERM 285 530596 - 530626 + r 73 -11.3 -2.71712 | gap 1, opp_overlap 530622, overlap 530584 530595 CGGCGAGTTTTGTAA C-GCGTGTTAGCTT GTGC GAGCTAACACGCCG ATTTAAAAACCGGCG Pcal_0559 531061 - 530849 - | hypothetical protein Pcal_0560 531947 - 531066 - | 2-oxoacid ferredoxin oxidoreductase subunit beta Pcal_0561 533569 - 531944 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 286 532274 - 532298 + g 81 -8.5 -4.30719 | overlap 532259 532276 GATCTTGGTCAGCTT GACCATGCGCT TTT GGTGCATGGCC TTTCTTATGGCAGGC TERM 287 533027 - 532999 - G 77 -12.4 -3.48924 | gap 1 TCATGCCGGACATAA CGGCGCCGACGGC AAGC GCC-TCGGCCCCG GACATCAACACCCTG Pcal_0562 534201 - 534028 - | paREP10 TERM 288 535088 - 535102 + G 72 -9.2 -3.64703 | TGCCGCGGCTGTGGG GGCCCT GAA GGGGCC TTTGCATGGGGGCGC Pcal_0563 534357 - 535595 + | citrate synthase Pcal_0564 536896 - 535592 - | malate dehydrogenase TERM 289 536924 - 536912 - H 70 -3.5 -4.62441 | opp_overlap 536912 GTCTAGAGAAAGAAA TTAAT ATA ATTAA GTATTTCGACCCATA Pcal_0565 536939 - 537334 + | hypothetical protein Pcal_0566 538429 - 537413 - | 3-dehydroquinate synthase TERM 290 537805 - 537821 + g 91 -5.1 -5.5208 | overlap 537815 CAAGGACTCTGACGT CTTCTTC GCG GATGAAG TTTTTTATCTTCTGG Pcal_0567 538970 - 538416 - | hypothetical protein Pcal_0568 539870 - 539217 - | hexulose-6-phosphate synthase Pcal_0569 539916 - 540359 + | hypothetical protein Pcal_0570 540356 - 540751 + | YbaK/prolyl-tRNA synthetase associated region Pcal_0571 540852 - 541133 + | hypothetical protein Pcal_0572 541489 - 541130 - | hypothetical protein pheT 543064 - 541517 - | phenylalanyl-tRNA synthetase subunit beta TERM 291 542474 - 542501 + g 80 -9.8 -4.18161 | gap 1, overlap 542494 AACCACCATTATTTG CCCCGCGGCGTCT ACC AG-TGCCGGGGGG TTTTCCCGGTTTATG Pcal_0574 543070 - 543408 + | hypothetical protein Pcal_0575 543976 - 543374 - | hypothetical protein Pcal_0576 544028 - 544969 + | DNA-cytosine methyltransferase Pcal_0577 544974 - 545831 + | hypothetical protein Pcal_0578 545863 - 546336 + | GCN5-related N-acetyltransferase Pcal_0579 547656 - 546340 - | isocitrate dehydrogenase (NADP) Pcal_0580 547752 - 548423 + | enoyl-CoA hydratase/isomerase Pcal_0581 548449 - 549618 + | TGS domain-containing protein Pcal_0582 549615 - 550052 + | hypothetical protein rfc 550049 - 551023 + | replication factor C small subunit tfb 551063 - 552058 + | transcription initiation factor IIB TERM 292 552107 - 552138 + G 75 -3.7 -4.74504 | gap 1 TGAGCCATTCAACGG CGGGCAT-CTGGTT CTGAA AACTGGCAAGCCCG TTTTTGACTTAACCT Pcal_0585 552069 - 552377 + | hypothetical protein Pcal_0586 552361 - 552699 + | hypothetical protein Pcal_0587 553009 - 552701 - | hypothetical protein Pcal_0588 553085 - 553558 + | 50S ribosomal protein L13E Pcal_0589 554285 - 553566 - | helix-turn-helix domain-containing protein TERM 293 554398 - 554417 + G 76 -12.2 -3.45832 | TAGCAGAGAGGAGCT TCTCGCGA AGAT TCGCGAGA TTAATTCTCAGCTTG Pcal_0590 554378 - 555367 + | hypothetical protein Pcal_0591 555367 - 556374 + | hypothetical protein Pcal_0592 556350 - 557027 + | putative RNA methylase Pcal_0593 557455 - 557024 - | hypothetical protein Pcal_0594 557955 - 557452 - | adenylate kinase Pcal_0595 559034 - 557958 - | N(2),N(2)-dimethylguanosine tRNA methyltransferase TERM 294 558467 - 558490 + g 93 -8.1 -5.18726 | CCACTAGGTTGCGAA GCCCCATCT CTAGGT AGAAGGGGC TTTTTCTTATGACCG Pcal_0596 559773 - 559027 - | helix-turn-helix domain-containing protein TERM 295 560159 - 560182 + G 72 -6 -4.258 | gap 1 GTTAAAGACGTGGGT GAAGTG-GTCG CGC CGACGCTCTTC TTTGTTCATAAATCG Pcal_0597 559988 - 560494 + | RNA-binding protein Pcal_0598 561148 - 560471 - | putative serine/threonine protein kinase TERM 296 560754 - 560764 + g 70 -2.4 -4.85599 | opp_overlap 560729 560730 560755 AGAAGGTCTTGCACA AGGC TAC GCCG TTTTTCTGGCGTCGC Pcal_0599 561180 - 561539 + | hypothetical protein Pcal_0600 562677 - 561514 - | glycosyl transferase family protein TERM 297 561944 - 561921 - G 75 -3.8 -4.73613 | gap 1 TGACGAGTAAGAAAA CAGAGGTGGCC ATA AGC-ACCACTG CGACGAATTTCCACA Pcal_0601 565753 - 562820 - | isoleucyl-tRNA synthetase TERM 298 565228 - 565205 - G 78 -9.6 -4.08394 | opp_overlap 565210, overlap 565206 565208 ACACCTGGGGCAAAA CCAGAGGACT CTGT AGTCCTCTGT CAGAAGGCCCATCTC TERM 299 565227 - 565206 - G 76 -13.1 -3.04715 | opp_overlap 565210, overlap 565205 565208 CACCTGGGGCAAAAC CAGAGGACT CTGT AGTCCTCTG TCAGAAGGCCCATCT TERM 300 565234 - 565250 + g 78 -6.5 -4.59773 | opp_overlap 565234 AGTCCTCTGTCAGAA GGCCCAT CTC ATGCGCC TTTTTAACAATGCGC Pcal_0602 566588 - 566310 - | hypothetical protein TERM 301 566502 - 566490 - G 78 -4.1 -4.89233 | overlap 566481 TACGAAGAGTAAAAA CTCCT CGG AGAAG TCTCTAGCCTCGGCC Pcal_0603 567256 - 566594 - | hypothetical protein Pcal_0604 567373 - 567954 + | hypothetical protein Pcal_0605 569884 - 567941 - | type III restriction enzyme, res subunit TERM 302 569103 - 569142 + g 83 -7.8 -4.57837 | overlap 569104 569113 ACCTTTGGGTATTCC ACCTCAGCCAGTTGGGCT ACGT AGCCCAACTCCCTTAGGA TTTTTACAACCCTAT TERM 303 569104 - 569141 + g 73 -11.3 -3.3422 | overlap 569103 569113 CCTTTGGGTATTCCA CCTCAGCCAGTTGGGCT ACGT AGCCCAACTCCCTTAGG ATTTTTACAACCCTA Pcal_0606 569944 - 570843 + | bifunctional phosphoglucose/phosphomannose isomerase TERM 304 571010 - 571028 + G 75 -8.8 -4.06419 | CTACGTCTCTCTGGC GGCTGGGA TAC TCCTGGCC TTGTTTATGAGGGCG Pcal_0607 570840 - 571448 + | peptidase A24A, prepilin type IV upp 572077 - 571445 - | uracil phosphoribosyltransferase Pcal_0609 574547 - 572079 - | peptidase M1, membrane alanine aminopeptidase TERM 305 572298 - 572316 + g 77 -13.8 -2.87132 | CTCTAGGAGTTCCAA CGCCGCGG CGA CTGCGGCG TATCTGACCCGGAAA TERM 306 574242 - 574224 - G 79 -5.2 -4.72272 | overlap 574227 CCTCCTCACGAAAAA CATGCCAA CCC TCGGCCTG GCCCGATACCTCACA Pcal_0610 575061 - 574591 - | AsnC family transcriptional regulator Pcal_0611 575231 - 576499 + | hypothetical protein Pcal_0612 577232 - 576456 - | FeS assembly ATPase SufC TERM 307 578330 - 578303 - g 71 -10.6 -3.51825 | gap 1, overlap 578312 CTACTGGAAGGAGAA TGGGGCAAAGGTG TGG CACCTA-GCCCCA AAGACGAGCAGTAGG Pcal_0613 577305 - 578726 + | FeS assembly protein SufB Pcal_0614 578755 - 579348 + | hypothetical protein Pcal_0615 580429 - 579836 - | hypothetical protein Pcal_0616 580474 - 581826 + | TBP-interacting protein TIP49 Pcal_0617 582332 - 581877 - | hypothetical protein TERM 308 582102 - 582078 - G 82 -10.7 -4.17296 | opp_overlap 582078 582090 GGTTATAGAGAGAAA CGCCAAAGTCC ACC GGACTCTGCCG GTTTGCCGTGTAAAA Pcal_0618 583837 - 582329 - | peptidase M50 Pcal_0620 584466 - 585179 + | hypothetical protein rpl12p 585485 - 585159 - | 50S ribosomal protein L12P Pcal_0622 585785 - 585582 - | 50S ribosomal protein L38E TERM 309 585984 - 585994 + r 72 -6.8 -4.20516 | CCCACTCGGGGGTGT TGCC TAG GGCA TTTATTGAGTAGAAG Pcal_0623 586625 - 586023 - | hypothetical protein TERM 310 586372 - 586341 - G 79 -13 -3.37796 | gap 1 CTCCATCAGCGAGAA GGCCAC-GAGGCGCA TGA TGCGGCTCTGCGGCC GTTGCAGGAGGTTCG Pcal_0624 586750 - 587670 + | 2,3-dimethylmalate lyase Pcal_0625 587677 - 589038 + | 2-methylcitrate dehydratase Pcal_0626 590057 - 589095 - | thioredoxin-disulfide reductase rps19p 590130 - 590606 + | 30S ribosomal protein S19P rps17p 590608 - 591051 + | 30S ribosomal protein S17P Pcal_0629 591044 - 591688 + | ERCC4 domain-containing protein Pcal_0630 592746 - 591652 - | glycoside hydrolase family protein Pcal_0631 593171 - 592746 - | UspA domain-containing protein Pcal_0632 594198 - 593164 - | glyceraldehyde-3-phosphate dehydrogenase Pcal_0633 595421 - 594195 - | phosphoglycerate kinase Pcal_0634 595531 - 596112 + | hypothetical protein TERM 311 597608 - 597572 - g 80 -10.1 -3.99275 | gap 1 TGACACAATAGCAAA GGCGGAGAGAGAGGGG AAGACG CCCCGC-CTCCCCACC TGGCTGGCCCCAGTC Pcal_0635 596139 - 597962 + | threonyl-tRNA synthetase Pcal_0636 598069 - 598449 + | S-adenosylmethionine decarboxylase proenzyme TERM 312 598607 - 598591 - g 75 -10.1 -3.7791 | opp_overlap 598586 GAACTATGTAGTAAA GGCACTC TAC GAGCGCC TCAACTATGTAGACA TERM 313 599136 - 599107 - g 72 -5.6 -4.52589 | TGCGTTTATACAAAA GCGGCACATAGG CCAAGC CCTAGCCGCCGC CCGCCTCGACGTATA Pcal_0637 598469 - 599377 + | hypothetical protein Pcal_0638 599503 - 601281 + | translation initiation factor IF-2 Pcal_0639 601641 - 601273 - | hypothetical protein Pcal_0640 603027 - 601642 - | hypothetical protein Pcal_0641 603628 - 604053 + | hypothetical protein Pcal_0642 604040 - 604690 + | radical SAM domain-containing protein TERM 314 606408 - 606425 + G 72 -9.1 -3.85698 | GTGGAGGCCTACGTG GAGGGCG TAGA TGCCCTC TTTGTGCCAGCCCCC TERM 315 607546 - 607575 + G 75 -12.1 -3.18033 | overlap 607545 607537 TCTTTGTGGAGAGGC CCGTGGAGCTGGC CAAC GCCAGCTCTGCCG TGTTGATCCATTATG Pcal_0643 606240 - 608600 + | hypothetical protein Pcal_0644 608975 - 609109 + | hypothetical protein TERM 316 609407 - 609453 + G 74 -7.3 -4.4009 | gap 2, opp_overlap 609432, overlap 609408 TTAAGTTCATGCTGG C-GCTGGAGGGCGCAGACGT-GT TAA ACGACGTTGGCGACCTCAAGCTG TTTTATAGGCTGGGC TERM 317 609408 - 609451 + G 81 -11 -3.80877 | gap 1, opp_overlap 609432, overlap 609407 TAAGTTCATGCTGGC GCTGGAGGGCGCAGACGT-GT TAA ACGACGTTGGCGACCTCAAGC TGTTTTATAGGCTGG Pcal_0645 609109 - 610029 + | peptidase M19, renal dipeptidase Pcal_0646 610057 - 610455 + | hypothetical protein TERM 318 610474 - 610493 + T 83 -12.2 -3.37796 | CGCGCCACCTTTGCC CTGGCCTT TTTC AAGGCCAG TTCTACCTCCTCCGC Pcal_0647 611453 - 610452 - | tRNA (guanine-N1-)-methyltransferase Pcal_0648 612598 - 611444 - | methionine synthase (B12-independent) Pcal_0649 612710 - 613918 + | acetyl-CoA acetyltransferase TERM 319 613943 - 613981 + G 72 -4.4 -4.66163 | overlap 613965 ATTTCCTCCTCATAT GCGTCTTTTGGCGGCGGT CCT ACTGCTGGCAATAGCAGC TTTTTCCGTCACAAT TERM 320 615145 - 615129 - g 70 -12.3 -2.71041 | overlap 615128 AAGCTCAATGACAAG GTGGGGT CAG ACCCCAC TTACAGAGACCTAGT Pcal_0650 613941 - 615344 + | hypothetical protein Pcal_0651 615601 - 615341 - | hypothetical protein Pcal_0652 616121 - 615576 - | hypothetical protein TERM 321 615689 - 615668 - G 76 -13 -3.09492 | overlap 615645 CTTGGAAGGCGAAGA GCGGCGTC ATAATA GACGCCGC GAAGAAGATAAAGGC Pcal_0653 617341 - 616118 - | hypothetical protein TERM 322 617389 - 617375 - H 79 -10 -3.79689 | opp_overlap 617373 AGATAAAAATTATAA CTCACC TCA GGTGAG CATAGCTTATAATAA TERM 323 618841 - 618808 - g 76 -7.2 -4.52589 | overlap 618812 TGTGGCTATACAAAA GGCAGTCGTGGCGG TGTCCC CCGCCTCGCCCTCC GTGGTGGCCTCCACT Pcal_0654 617423 - 619528 + | hypothetical protein Pcal_0655 619676 - 620095 + | hypothetical protein TERM 324 620254 - 620276 + G 74 -7.6 -4.11216 | overlap 620274 GCCAAGATAGTGGGC GAGGCGAGGG GGT CCTGCGTCTC TTTTACGCCTAGGAG Pcal_0656 620176 - 620508 + | hypothetical protein Pcal_0657 620820 - 621701 + | thiamine monophosphate kinase-like protein Pcal_0658 622217 - 623302 + | hypothetical protein Pcal_0659 624058 - 623357 - | hypothetical protein Pcal_0660 624117 - 624332 + | PaREP6 domain-containing protein/PaREP6 domain-containing protein TERM 325 624629 - 624671 + G 72 -4.9 -4.60255 | gap 2, overlap 624618 624620 624627 624631 GCTCGACGCACTGGC GCCTAT-TGCGCTTGT-CGCC GTC GGCGTAGACGCGCATATAGCC TTTTTAGCCACTTCT Pcal_0661 624459 - 624977 + | hypothetical protein Pcal_0662 625642 - 624974 - | ribose-5-phosphate isomerase Pcal_0663 626038 - 625655 - | signal-transduction protein TERM 326 626388 - 626349 - g 91 -12.8 -4.07568 | gap 1, overlap 626350 626371 TCTTCGTCTTCAAAA GCCCCCAGAGCGG-GACAC TAC ACGTCTCCGCGCTGGGGGG AGCCGCCTACAAGGC TERM 327 626387 - 626350 - g 88 -16.3 -3.04398 | gap 1, overlap 626349 626371 CTTCGTCTTCAAAAG CCCCCAGAGCGG-GACAC TAC ACGTCTCCGCGCTGGGGG GAGCCGCCTACAAGG Pcal_0664 626105 - 627994 + | glyceraldehyde-3-phosphate ferredoxin oxidoreductase Pcal_0665 628060 - 628584 + | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Pcal_0666 628581 - 628892 + | pyruvate ferredoxin oxidoreductase, delta subunit Pcal_0667 628892 - 630070 + | pyruvate ferredoxin oxidoreductase, alpha subunit TERM 328 630309 - 630294 - g 86 -11.8 -4.07568 | CGTGGCCTTTGAAAA CGCCGC CGCG GCGGCG TCCGGGGTGGAGACG TERM 329 630703 - 630683 - g 74 -8.2 -4.24123 | overlap 630698 TGAACAAGGTTAAAA CGGCGCTG GAGTA CACCGCCG AGGGGCCCACATTCC Pcal_0668 630067 - 631011 + | pyruvate ferredoxin oxidoreductase, beta subunit Pcal_0669 631427 - 631008 - | PilT domain-containing protein TERM 330 631049 - 631080 + g 87 -16 -2.95774 | opp_overlap 631059, overlap 631056 631059 CGGCCCTTTTAGCCA CGGCAGGGAACTTC CTAA GAAGTTCTCTGTCG TATGTGATAAGTATC Pcal_0670 631845 - 633725 + | hypothetical protein TERM 331 634054 - 634040 - g 71 -7.1 -4.13945 | opp_overlap 634051 AGGTGTATGTGAAAA GGAGG CCCCT CCTCC GCGGCGTCTGCGAGT Pcal_0671 633871 - 634281 + | hypothetical protein TERM 332 635115 - 635092 - g 75 -5.2 -4.5954 | opp_overlap 635092, overlap 635094 GGACACCACATAAAA GGCGGCGA CAAGCTCC TCGCCGAC TTCATATCCCGGCAC Pcal_0672 634363 - 635820 + | glycoside hydrolase family protein TERM 333 636391 - 636404 + G 72 -9.5 -3.76568 | overlap 636392 636395 TCGCCCAGTCGCCCC GGCGG AGGG CCGCC TTCTCTTCTCGGTGC Pcal_0673 635837 - 637042 + | major facilitator transporter Pcal_0674 637503 - 637087 - | hypothetical protein TERM 334 637497 - 637483 - G 73 -3.4 -4.83269 | overlap 637484 AGACCATAGCAAAAA TGCGCC ACT GACGCC TGCCATCGAAGTGAG Pcal_0675 637655 - 638656 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit Pcal_0676 638653 - 639351 + | hypothetical protein Pcal_0677 640166 - 639444 - | UBA/THIF-type NAD/FAD binding protein TERM 335 640371 - 640340 - g 84 -15.2 -3.01712 | gap 1 CTTGTGGTCTCAATA GCCGTGGCGTACGCC CTC GGC-TACGCCATGGC CAAGAGCAGGAGGGC TERM 336 640489 - 640510 + G 80 -5 -4.93696 | overlap 640492 CTTCTTCCCGCGCAT CGGCGCCG AGCTTG CGGCGGTG TTTTTAATATTTACG TERM 337 640801 - 640831 + G 77 -12 -3.61715 | gap 1, opp_overlap 640792 TGAAGACGGCGACTT GGCCACGGCGTAT GTGGGA ATA-GCCGTGGCC TTGTTGGGCAACGTG Pcal_0678 640262 - 641623 + | binding-protein-dependent transport systems inner membrane component Pcal_0679 641614 - 642348 + | ABC transporter related Pcal_0680 642809 - 642345 - | hypothetical protein Pcal_0681 643169 - 642870 - | translation initiation factor IF-1A Pcal_0682 643997 - 643266 - | transposase, IS605 OrfB TERM 338 644759 - 644769 + G 83 -4.6 -5.04733 | CTACGCAATTGCGAC GCCG CTT TGGC TTTTCTTTGTGGTTG TERM 339 644785 - 644813 + G 72 -6.6 -4.27316 | gap 1, overlap 644784 TTTTCTTTGTGGTTG GGCG-AGTGGCCG CGGT CGCCCTCTTCGCC TTTTGGCTTCAGCCC TERM 340 645216 - 645250 + G 82 -6.3 -4.78149 | TTAACCGGCCTCTTT GAGCCCATCGGCCAC CTCAT GTCCACGGTGGGCTC TTTTTACGTTATGGC Pcal_0683 644376 - 645884 + | ABC transporter related Pcal_0684 647070 - 646303 - | hypothetical protein TERM 341 646815 - 646801 - G 76 -7 -4.42788 | overlap 646803 CTTAAGCTTAGAAAA GCGCTC GCT GGGCGC CACGAACCCGTCGAC Pcal_0685 647144 - 648028 + | radical SAM domain-containing protein Pcal_0686 648066 - 648761 + | rhomboid family protein Pcal_0687 649042 - 648749 - | ArsR family transcriptional regulator TERM 342 649176 - 649159 - H 72 -10.5 -3.01791 | AGGCGCCGGTGAACA CGCCCCC TCCA AGGGGCG TACACACGCAAGCCG Pcal_0688 649329 - 649658 + | hypothetical protein Pcal_0690 651014 - 650106 - | hypothetical protein Pcal_0689 649665 - 650189 + | hypothetical protein TERM 343 650196 - 650175 - Gf 71 -9.5 -3.52079 | gap 1, opp_overlap 650177 GAAGAGCCTAGACAA GAGCTCTCTC ACT GAGAG-GCTC TGTAGCAGTTGGTAC TERM 344 650521 - 650531 + gF 77 -8.2 -4.10161 | AGCAGTTCCCCCATG GCCG CGG CGGC TTTTACCACCTCGTC leuS 651138 - 653978 + | leucyl-tRNA synthetase Pcal_0692 657679 - 653981 - | reverse gyrase TERM 345 655439 - 655408 - G 76 -12.8 -3.09803 | TAATCGCAGCCAAGA CGTCGAGCGGCCGG CAGT CCGGCGGCACGTCG ACGTCGTCCACGTAC Pcal_0693 657757 - 658146 + | hypothetical protein Pcal_0694 658674 - 658135 - | hypothetical protein TERM 346 658344 - 658360 + g 70 -4.3 -4.57569 | opp_overlap 658356, overlap 658346 CTACCCCCAGCTCGT CGGCCTT CAA GAGGGCG TTTTTAACGGCCTCG Pcal_0695 659222 - 658677 - | PaREP1 domain-containing protein TERM 347 659491 - 659529 + G 79 -12.5 -3.30124 | gap 1 GGGAAGGGGGCGTGG GTGGTGAGAGACG-GCGC CGTT GTGCACGTCTCTCCCTAC TTCTACGCCGTGGGG TERM 348 660354 - 660391 + G 85 -14.9 -3.14126 | gap 1 CGGCAACGCCATGGT GGTGGCCCAGGTGGGG GAGACCG CCTCGCC-GGGCCACC TCTTCGAATTTCTAA Pcal_0696 659455 - 661683 + | DNA polymerase B region Pcal_0697 662097 - 661687 - | hypothetical protein TERM 349 661838 - 661854 + g 78 -7.9 -4.55689 | overlap 661841 TTCCGCCCGGCGGCT GAGGCGC CCA GCGCGTC TTTTATCTGGGTGCT Pcal_0698 663515 - 662112 - | V-type ATP synthase subunit B Pcal_0699 663556 - 664416 + | 6-phosphogluconate dehydrogenase, NAD-binding TERM 350 664433 - 664419 - T 74 -7.8 -4.10453 | overlap 664422 CAAATCGTCGTAAAA GAGGAG CCG CTCCCC CGCCGCCCTATAAGC Pcal_0700 665174 - 664401 - | pseudouridylate synthase Pcal_0701 665201 - 665893 + | GCN5-related N-acetyltransferase Pcal_0702 665922 - 666200 + | hypothetical protein Pcal_0703 666220 - 666870 + | hypothetical protein Pcal_0704 667351 - 666863 - | hypothetical protein TERM 351 667719 - 667737 + G 76 -13.1 -3.01912 | opp_overlap 667718 667717 667715 CGTGTCGATAATATG CGCCGCC TTCTC GGCGGCG TGTCTCTCCATATAC Pcal_0705 667378 - 668133 + | diphthine synthase Pcal_0706 668978 - 669508 + | hypothetical protein Pcal_0707 670640 - 669489 - | hypothetical protein Pcal_0708 670685 - 671344 + | lysine exporter protein LysE/YggA Pcal_0709 672105 - 671416 - | glycerophosphoryl diester phosphodiesterase TERM 352 671956 - 671940 - G 82 -13.7 -3.28712 | opp_overlap 671937 CCTCGTCGTGGACAA CGACGGG CAC CCCGTCG GCAGTCACTTGCACA Pcal_0710 673183 - 672350 - | hypothetical protein Pcal_0711 673198 - 673512 + | hypothetical protein Pcal_0712 673786 - 673493 - | hypothetical protein Pcal_0713 674213 - 673797 - | hypothetical protein Pcal_0714 674681 - 674499 - | hypothetical protein Pcal_0715 674755 - 675204 + | hypothetical protein TERM 353 676754 - 676740 - g 75 -5.6 -4.58395 | overlap 676742 GCCATCTTCGAAAAA CGGCTC GAA GAGCTG AGAGAAAAAGTGGAA Pcal_0716 675204 - 677663 + | helicase domain-containing protein Pcal_0717 678006 - 677632 - | hypothetical protein Pcal_0718 681050 - 678003 - | hypothetical protein Pcal_0719 684002 - 681159 - | hypothetical protein TERM 354 682280 - 682251 - G 70 -4.1 -4.58685 | overlap 682266 682268 AAACTCGTCGAAAAA GGCCTCGGGCAAA AACC TCGGCACGAGGCG ACCGCCATCAACGCC TERM 355 682278 - 682266 - G 86 -9.1 -4.56597 | overlap 682251 682268 GGCCTCGGGCAAAAA CCTCG GCA CGAGG CGACCGCCATCAACG Pcal_0720 684199 - 684993 + | hypothetical protein Pcal_0721 685648 - 684980 - | hypothetical protein TERM 356 685045 - 685056 + g 75 -5.8 -4.64844 | overlap 685039 ACGGCGGTAGGTCTA CCAC GACC GTGG TTTTGTGTGTATACA Pcal_0722 686034 - 685678 - | MazG nucleotide pyrophosphohydrolase Pcal_0723 686558 - 686037 - | hypothetical protein Pcal_0724 687049 - 686561 - | hypothetical protein Pcal_0725 687512 - 687093 - | CoA-binding domain-containing protein Pcal_0726 687687 - 687514 - | YHS domain-containing protein TERM 357 688469 - 688487 + G 86 -6.7 -5.02074 | gap 1, overlap 688466 CAGCTCCTATGCCGT GGCTGTGG GGGG CCAC-GCC TTTTTTGAGGCGTCG TERM 358 688505 - 688517 + G 71 -6.9 -4.1891 | overlap 688498 TTTTGAGGCGTCGGC GGCGG TTA TCGCC TTTGTGTTGGCGGGG Pcal_0727 687729 - 690107 + | heavy metal translocating P-type ATPase Pcal_0728 690531 - 690094 - | hypothetical protein Pcal_0729 691450 - 690554 - | manganese containing catalase TERM 359 690699 - 690720 + g 84 -2.1 -5.46276 | overlap 690700 AGCGGCTGGCCGTCG GCTGGGTGG GCTC CCTTCCAGA TTTTTTCTATGTCTT Pcal_0730 692636 - 691614 - | cytochrome c-type biogenesis protein (CcdA) Pcal_0731 693085 - 692618 - | hypothetical protein Pcal_0732 693841 - 693350 - | hypothetical protein TERM 360 694271 - 694283 + G 70 -4.8 -4.49937 | GGTATCGGCGGCGCC CCTC AGCGC GAGG TTTTGGTGTTCTTCA Pcal_0733 693941 - 694576 + | hypothetical protein Pcal_0734 694632 - 695135 + | hypothetical protein Pcal_0735 695193 - 695504 + | FHA domain-containing protein TERM 361 695734 - 695708 - g 83 -7.8 -4.63218 | opp_overlap 695708, overlap 695709 GGGCGCTGAAGAAAA GGGCGCCGAGGC TAC GCCTCGCCCGCC GTCTCTTCCCGCTGG TERM 362 695734 - 695709 - g 73 -11.1 -3.3761 | gap 1, opp_overlap 695708, overlap 695708 GGCGCTGAAGAAAAG GGC-GCCGAGGC TAC GCCTCGCCCGCC GTCTCTTCCCGCTGG Pcal_0736 695550 - 695933 + | hypothetical protein Pcal_0737 696646 - 695930 - | hypothetical protein Pcal_0738 697742 - 696663 - | radical SAM domain-containing protein TERM 363 696693 - 696709 + g 80 -9.3 -4.12198 | overlap 696695 TATTCTGTGGAAGGT GTCCCGC TCG GCGGGTC TTTTGCCCACTTCTC TERM 364 696695 - 696707 + g 75 -10.5 -3.6543 | overlap 696693 TTCTGTGGAAGGTGT CCCGC TCG GCGGG TCTTTTGCCCACTTC Pcal_0739 697975 - 698559 + | hypothetical protein Pcal_0740 698661 - 699704 + | radical SAM domain-containing protein TERM 365 699974 - 699986 + G 78 -9.1 -4.19276 | GTGGAGTCTGGGAGG GCTCC TCG GGAGC TTTTGCCGCTTTTAG Pcal_0741 699728 - 700039 + | hypothetical protein Pcal_0742 700030 - 700935 + | methyltransferase type 11 Pcal_0743 702056 - 700953 - | hypothetical protein TERM 366 701078 - 701098 + g 76 -13.3 -2.70994 | overlap 701077 CGCCTATTTCTACCA GCGCCTGTG TTC TACAGGCGC GTTCTATGAAGTTCC TERM 367 701571 - 701601 + g 74 -8 -4.12456 | overlap 701569 GAAGGTCTTAAGCGC GGCGGAGTCGGGCG GGG CGGCCTCCACCGCC TTTTCAAAGTCCTCT Pcal_0744 702116 - 703021 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pcal_0745 703044 - 703373 + | hypothetical protein Pcal_0746 703373 - 703606 + | hypothetical protein TERM 368 703988 - 703974 - T 85 -11.4 -3.61398 | overlap 703977 TGCGGCGGCGAAGAA CAGGGG CCG CCCCTG CGGCTAACTCACTCG Pcal_0747 704862 - 704209 - | hypothetical protein Pcal_0748 706577 - 705063 - | N-6 DNA methylase Pcal_0749 706977 - 707798 + | hypothetical protein TERM 369 708126 - 708173 + G 72 -5.5 -4.52589 | AGGCTGGGCTTGGTG GTAGGTCCTCTCCACGGCC TTGAGGAAGT GGCCGTGGAGAGAATAGGC TTTTCTCTAAACCCC Pcal_0750 708021 - 708863 + | hypothetical protein TERM 370 710070 - 710026 - g 100 -21.5 -3.53012 | opp_overlap 710016 710014 GCGTCCCTGTGGAAA CACGGCGTGTGTCCACGGAAT TTA ATTCCGTGGTCACCCGCGGTG GGTGAAGGCGGGGCC Pcal_0751 709392 - 710075 + | hypothetical protein Pcal_0752 710086 - 710835 + | hypothetical protein Pcal_0753 710840 - 711154 + | hypothetical protein Pcal_0754 711178 - 711762 + | hypothetical protein Pcal_0755 711759 - 712160 + | hypothetical protein TERM 371 712493 - 712483 - g 71 -6.8 -4.18018 | overlap 712484 GTCGCTTAGGGAAAA CGAG GCA CTCG CCTACATCCACTCGT Pcal_0756 712157 - 714094 + | hypothetical protein TERM 372 714171 - 714193 + G 93 -12 -4.37886 | GATGAGAGAGGACTG GCGGCGTG AGGCGTA CACGCCGC TTTTGTCCGCCGTCG Pcal_0757 714121 - 714906 + | hypothetical protein TERM 373 715072 - 715104 + G 78 -4 -4.90778 | opp_overlap 715072 ACATCACTCACACTA GGCAGTTGAAGGAC TGTAC GTCCCCCATCTGTC TTTTGTTTCAATACG TERM 374 715554 - 715590 + G 100 -16.6 -4.33151 | gap 1, opp_overlap 715547 GCATTAGAGCAGTTC GGCCAGAGGGCCGTGGC GAGG GCCATAGCCCTC-GGCC TTTTGCGTTATGATC Pcal_0758 714900 - 715655 + | hypothetical protein Pcal_0759 715837 - 716103 + | hypothetical protein Pcal_0760 716103 - 716366 + | hypothetical protein Pcal_0761 716568 - 718067 + | hypothetical protein Pcal_0762 718226 - 719164 + | Fis family transcriptional regulator TERM 375 719153 - 719167 + F 72 -7.8 -3.98312 | CGCATCACAGATGCG GGGCTG GAG TAGCCC TTTACCTTTTCTATG Pcal_0763 719326 - 720216 + | AAA ATPase Pcal_0764 720213 - 720797 + | zinc finger SWIM domain-containing protein Pcal_0765 721020 - 721481 + | hypothetical protein Pcal_0766 721486 - 722418 + | hypothetical protein TERM 376 723437 - 723456 + G 73 -12.1 -3.12668 | opp_overlap 723425 723426 TAACGCCCCCCTCTA CGGCGGC CTCGTC GCCGCCG TTGAGTATGGGAATA TERM 377 724875 - 724841 - g 74 -12.8 -2.99319 | AATGGCGCAGATAGA CGTGGGACAGCTGG CCTTCCT CCCGCCGCCCCACG AGGAGCCGGAGGGCT TERM 378 725048 - 725075 + G 74 -11.2 -3.5394 | overlap 725067 CGACTTCTTGATTGG GAGGCTGGCGGA CTTC TACGCCCGCCTC TTTAGGAAGGGCTTT TERM 379 730538 - 730524 - g 71 -10 -3.55761 | GAGCTACTGGCCAAA TTCGCC GCC GGCGAA TTAACGAGGTCGCAA TERM 380 736932 - 736914 - g 75 -3.8 -4.74132 | opp_overlap 736923, overlap 736918 AGAGTGGACGAAAAA GGTAGC GCTGTAG GCCACC GCCTCCTCCTATACG Pcal_0767 722415 - 737591 + | chromosome segregation ATPase-like protein Pcal_0768 739010 - 737604 - | 4-alpha-glucanotransferase TERM 381 738678 - 738693 + g 74 -6.8 -4.35044 | overlap 738668 CCTGTGGCGTTTGTA GGCCTT CTCA AGGGCC TTTGTCTTTACCTCC Pcal_0769 739441 - 739010 - | hypothetical protein Pcal_0770 739527 - 740231 + | hypothetical protein Pcal_0771 741411 - 740185 - | phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase TERM 382 740809 - 740841 + g 71 -7.8 -4.07885 | gap 2 TTTTACGTCGTCTAT GTGCTCGT-G-GGTGG GTC CCGCCGTTACGAGCAC TTTTACGCCGGCGTA Pcal_0772 742277 - 741408 - | spermine synthase / spermidine synthase Pcal_0773 744004 - 742289 - | peptidase S9 prolyl oligopeptidase Pcal_0774 744063 - 744380 + | hypothetical protein TERM 383 744726 - 744761 + G 71 -7.6 -4.07885 | gap 1, opp_overlap 744718 744733 ACACGAACTGGCCCA TAGGC-AAGTCGCCAGG AGG CTCGGCTACTTTGCCTA TTTTCAGGCCGACTA Pcal_0775 744529 - 745152 + | peptidase M50 TERM 384 746063 - 746043 - g 73 -11.1 -3.4072 | GACCTGCTAGTAGAA CGCGCCC TGGCCGC GGGCGCG TACGGCGCAAAGCTC Pcal_0776 745146 - 746213 + | galactokinase TERM 385 746619 - 746586 - g 71 -8 -4.07877 | CTACTTTAGAAACAA GGGGAGGGAAATCG GCGTGT CGCTTACCCACCCC CACTCCCAAATATAT TERM 386 746910 - 746898 - g 87 -6.9 -5.02476 | opp_overlap 746898 AGACGCCCTAAAAAA GACGC TAT GCGCC TTTAAAAACGTCTTG Pcal_0777 746203 - 747144 + | galactose-1-phosphate uridylyltransferase rpl30p 747680 - 747141 - | 50S ribosomal protein L30P rps5p 748285 - 747677 - | 30S ribosomal protein S5P Pcal_0780 748933 - 748310 - | RNase HII TERM 387 748937 - 748917 - G 82 -10.5 -4.15044 | GGTCTGCTCAATAAA TCTTGTGGA AAT CCCACAAGA TCTCAAGTCGTATCT Pcal_0781 750275 - 749091 - | acetyl-CoA acetyltransferase Pcal_0782 751391 - 750321 - | ABC transporter related TERM 388 752456 - 752485 + G 78 -6.3 -4.60487 | opp_overlap 752462 752474 752476, overlap 752458 AGGCGGCTGGAGGGG GACAGAGTCGTGT TTAA ACACGCCTCGGGC TTTTTGGCCGTGGTC Pcal_0783 751436 - 752566 + | hypothetical protein Pcal_0784 752597 - 752995 + | methyltransferase type 11 TERM 389 753511 - 753499 - g 100 -9.1 -5.24129 | opp_overlap 753497 GCTCGTGATAAAAAA CGCCA CAT TGGCG CGTCAATTGGCCACA TERM 390 753888 - 753871 - g 70 -4.7 -4.55287 | overlap 753872 GCTACTTATAGAAAA CCCGGGG CTGG CCCAGAG ACTAAAAACGCTGGT Pcal_0785 753053 - 754102 + | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein TERM 391 754114 - 754092 - T 73 -12 -2.73875 | overlap 754089 TTTGGGCCAACAGGA GGAGGCCCTA GGC TAGGGCCTCT GGGGTAGAGGTGCCC Pcal_0786 754779 - 754099 - | deoxyribose-phosphate aldolase Pcal_0787 754780 - 755112 + | acylphosphatase Pcal_0788 755440 - 755093 - | hypothetical protein Pcal_0789 756655 - 755465 - | hypothetical protein Pcal_0790 757541 - 756675 - | AzlC family protein TERM 392 757438 - 757421 - GR 71 -6.9 -4.13304 | overlap 757412 757422 AAACCACGGCCAAAA GGGCTGG GAGG CCAGCCG CCGTCCACGTCGCCC Pcal_0791 759102 - 757516 - | XRE family transcriptional regulator TERM 393 757956 - 757936 - G 73 -3.2 -4.77036 | overlap 757938 TGCCACTATTAAAAA GCCGCC GGACTTTAA GACGGC GCTCACCTTCTCCAG Pcal_0792 759617 - 759144 - | PadR family transcriptional regulator Pcal_0793 760440 - 759610 - | NH(3)-dependent NAD(+) synthetase Pcal_0794 761745 - 761212 - | nicotinamide-nucleotide adenylyltransferase pheS 763211 - 761745 - | phenylalanyl-tRNA synthetase subunit alpha TERM 394 762695 - 762707 + g 85 -10.5 -4.26188 | opp_overlap 762695 GCTTTACTGAGTCAA GCGGC GCC GCCGC TTTTACGTATATCAG TERM 395 762799 - 762813 + g 70 -2.1 -4.72029 | gap 1, overlap 762797 GCCGAATCCAACTGG GC-GAG AGCC CTCTGC TTTTCTTCAATTGAG TERM 396 763246 - 763304 + r 85 -10 -4.1891 | opp_overlap 763247, overlap 763247 TTTATGTATTGAACT AGCGGCCCTTGAGGAGGGGCAGTGGGGG TTC CTCCTCTTTCTCCTCCTCTCTGGCCGCC TTTGTCTTAAACACC TERM 397 763247 - 763303 + r 83 -13.5 -3.11024 | opp_overlap 763247, overlap 763246 TTATGTATTGAACTA GCGGCCCTTGAGGAGGGGCAGTGGGGG TTC CTCCTCTTTCTCCTCCTCTCTGGCCGC CTTTGTCTTAAACAC Pcal_0796 763507 - 763244 - | CopG/Arc/MetJ family transcriptional regulator TERM 398 763401 - 763413 + g 73 -3.3 -4.87133 | overlap 763402 CTCACCAGCTCGTCA AGCTC CTC GAGCA TTTTCTTTGGCACGT Pcal_0797 763845 - 763528 - | hypothetical protein TERM 399 763609 - 763620 + g 77 -2.2 -5.11033 | gap 1, overlap 763609 CGGCAGTGTGGCAAG C-CGC CTC GCGAG TTTTTTCAACTTCTC Pcal_0798 765005 - 763881 - | hypothetical protein Pcal_0799 766580 - 765081 - | hypothetical protein TERM 400 765243 - 765264 + g 88 -13.7 -3.64703 | overlap 765232 AATCTCCGGCGCCAG CGGGGCCAG ATAC TTGGCCCCG TTTACCTCCACGACC Pcal_0800 766799 - 767092 + | hypothetical protein Pcal_0801 768298 - 767075 - | hypothetical protein Pcal_0802 768643 - 768317 - | hypothetical protein Pcal_0803 768732 - 769370 + | acetyl/acyl transferase related protein Pcal_0804 772154 - 769533 - | aconitate hydratase TERM 401 769617 - 769629 + g 71 -6.9 -4.11404 | TGCCCACGTGTAGAC GGCGG CCC TCGCC TTTATCTCGTCTACG Pcal_0805 772364 - 772182 - | hypothetical protein Pcal_0806 772906 - 772361 - | hypothetical protein Pcal_0807 773200 - 773586 + | S-adenosylmethionine decarboxylase proenzyme TERM 402 773791 - 773775 - g 82 -13.7 -3.28712 | TCGGCGTCGGCAGAA GCGGCCT CGT AGGCCGC GCCTTCGCCATGAGG Pcal_0808 773618 - 774226 + | hexulose-6-phosphate isomerase Pcal_0809 774468 - 775181 + | hypothetical protein TERM 403 775592 - 775624 + G 75 -8.4 -4.07568 | gap 2, opp_overlap 775580 GAATTGGCCACGCTG GCCGGG-GCAG-TGGT AAT GCCAGCGGCGCCCGGC TTTTACACAAGGCCC Pcal_0810 775178 - 775744 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pcal_0811 775883 - 775716 - | paREP10 TERM 404 775965 - 775944 - R 100 -12.9 -3.83323 | overlap 775945 TTTACATAATGGAAA GCCCCGCCC TTTA GGGCGGGGA GGAGGCCAGATAATG TERM 405 775964 - 775945 - R 100 -16.4 -2.89511 | overlap 775944 TTACATAATGGAAAG CCCCGCCC TTTA GGGCGGGG AGGAGGCCAGATAAT Pcal_0812 776941 - 776105 - | protein of unknown function DUF340, membrane Pcal_0813 777054 - 777323 + | hypothetical protein Pcal_0814 778013 - 777348 - | purine phosphorylase family protein 1 TERM 406 779306 - 779332 + G 93 -9.2 -4.72272 | ATTCAGGTGGGCTCA GGCGGCGGGGGC ACC GACGCCGCGGCC TTTTTCATGGCCGGC Pcal_0815 778520 - 779470 + | peptidase M42 family protein Pcal_0816 779492 - 779818 + | hypothetical protein Pcal_0817 779910 - 780596 + | triosephosphate isomerase TERM 407 780642 - 780655 + T 70 -3.9 -4.66953 | GTGCGTATTTATGCG CTTAT GTTT ATAAG TTTTTCACATATTCG Pcal_0818 780936 - 780649 - | hypothetical protein Pcal_0819 780964 - 781335 + | hypothetical protein Pcal_0820 781948 - 781316 - | hypothetical protein Pcal_0821 781996 - 782451 + | 30S ribosomal protein S6e TERM 408 782448 - 782426 - T 75 -5.5 -4.59853 | gap 1, overlap 782428 782430 TGAAGGGCGGAAAAA CAGAGGAGGC GGCC GCCTCC-CAG TAGCTATTTTACAAT TERM 409 782444 - 782428 - T 72 -7.9 -3.91164 | overlap 782426 782430 AAGGGCGGAAAAACA GAGGAGG CGG CCGCCTC CCAGTAGCTATTTTA TERM 410 782445 - 782430 - T 74 -10.4 -3.53855 | overlap 782428 782426 GGGCGGAAAAACAGA GGAGGC GGCC GCCTCC CAGTAGCTATTTTAC Pcal_0822 782694 - 782452 - | AsnC family transcriptional regulator Pcal_0823 783422 - 782715 - | ABC transporter related Pcal_0824 784162 - 783419 - | ABC transporter related Pcal_0825 785312 - 784134 - | extracellular ligand-binding receptor TERM 411 784485 - 784469 - GH 72 -10.1 -3.28712 | opp_overlap 784468 CCGCCGCTGGGACAA GGAGCTC GGA GAGCCCC GTACTTCCATCGGCC TERM 412 785622 - 785637 + G 76 -4.6 -4.82901 | overlap 785613 785614 AGTCTTCGCCGCGTG GGCGGG GCTT TCTGCC TTTTTCTGGCCAAGA Pcal_0826 785587 - 786543 + | inner-membrane translocator Pcal_0827 786540 - 787661 + | inner-membrane translocator TERM 413 787803 - 787787 - f 85 -10.1 -4.20712 | overlap 787789 CATAAGACTTGAAAA CAGGGCC GTA GGCCCTA GTAGCCTCGTGGCGG TERM 414 787801 - 787789 - f 81 -10.5 -3.69449 | overlap 787787 TAAGACTTGAAAACA GGGCC GTA GGCCC TAGTAGCCTCGTGGC Pcal_0828 787997 - 788431 + | hypothetical protein TERM 415 788559 - 788613 + G 82 -10.5 -4.13282 | opp_overlap 788576 TGCTGCGGCCGCATT GAGAGCCCCGGCGAATAGGGCGGGC TTAGT GCCCGGCCTCCTCCTCGGAGGTCTC TTTTCAGCGTATCCT Pcal_0829 788431 - 789234 + | hypothetical protein Pcal_0830 789253 - 790053 + | hypothetical protein TERM 416 790617 - 790597 - g 78 -9.7 -3.95073 | overlap 790566 TTCTACAGCCACAAA GGCGTCGTA ATC TACGACGTC GACAAAAGGGCCCTG Pcal_0831 790078 - 792450 + | protein of unknown function DUF699, ATPase putative Pcal_0832 792615 - 793517 + | hypothetical protein Pcal_0833 793553 - 794194 + | hypothetical protein Pcal_0834 795030 - 794203 - | hypothetical protein TERM 417 794490 - 794472 - G 71 -10.2 -3.57615 | overlap 794463 TTAAGAGGCCGTAAA GCCCCAGC GCG GCTGCGGC GGAGGTTGCCCTTAG Pcal_0835 795434 - 795030 - | translation initiation factor IF-2 subunit beta TERM 418 795238 - 795212 - G 75 -4.2 -4.81551 | CATGGAGAGTAAAAA CGTCGCCCTCCA CCG TGCCGGGCACCG CCAGCTCCTTCTGGA Pcal_0836 796027 - 795458 - | hypothetical protein Pcal_0837 797204 - 796032 - | acetyl-CoA acetyltransferase TERM 419 796347 - 796367 + g 71 -7.5 -4.10161 | opp_overlap 796341 796339, overlap 796349 TGTAAAACAGTCGTG GACCTCGGC CAC GTCGAGGTA TTTTACAGGCTCCTG TERM 420 796349 - 796365 + g 75 -10.1 -3.64716 | opp_overlap 796341 796339, overlap 796347 TAAAACAGTCGTGGA CCTCGGC CAC GTCGAGG TATTTTACAGGCTCC TERM 421 796475 - 796497 + g 75 -9.8 -3.85817 | opp_overlap 796469 796468, overlap 796476 TGCTCAAATTGGCCG TGCCATTGGC ATA GCCGATGGCC TTTATCCACACAGGT TERM 422 796476 - 796496 + g 77 -13.3 -2.91276 | opp_overlap 796469 796468, overlap 796475 GCTCAAATTGGCCGT GCCATTGGC ATA GCCGATGGC CTTTATCCACACAGG Pcal_0838 798487 - 797255 - | butyryl-CoA dehydrogenase TERM 423 797478 - 797458 - G 87 -12.5 -3.90744 | TGGCCTCGGAAATAA CCTCCTCGG CTA CCGAGGTGG CATAGTACTTAGCGA TERM 424 799128 - 799113 - g 82 -6 -4.7254 | overlap 799099 AGCCGCTAGCAAAAA GGCGGC TAAA GCCCCC AAAAATCCCCTATGG TERM 425 799147 - 799134 - g 83 -8.1 -4.60924 | opp_overlap 799137, overlap 799135 TAAAGCCCCCAAAAA TCCCC TATG GGGGA CGCATCGTGTCCTAT Pcal_0839 798593 - 800326 + | AMP-dependent synthetase and ligase Pcal_0840 800349 - 801293 + | aldo/keto reductase TERM 426 801997 - 802033 + G 78 -9.4 -3.99324 | overlap 801980 GCAGGAGGTGGACTC CGCGCTTATGTACAAG GCCGG CTTGCCCATGGGCGCG TTTATCCTACTAGAC Pcal_0841 801344 - 803332 + | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding Pcal_0842 803372 - 804460 + | cellulase TERM 427 805110 - 805083 - g 83 -13.5 -3.53012 | gap 1, overlap 805103 CTCCGTCTTGTTAAA CGCGGGCGTAGT GGACT AC-ACGCCCGCG TGGAGCGAGAGCCAG Pcal_0843 804460 - 805434 + | MscS mechanosensitive ion channel Pcal_0844 806135 - 805431 - | ABC transporter related TERM 428 805794 - 805806 + g 71 -7.7 -4.09243 | GTAGACCCACTCCAA GGTGT CTA ACACC TTTTCCCGAGCTCTC Pcal_0845 806851 - 806126 - | ABC transporter related Pcal_0846 807813 - 806848 - | inner-membrane translocator TERM 429 807073 - 807060 - G 70 -2.3 -4.82901 | overlap 807061 CGCCGCCTAGAAAAA CGACC GCCA AGCCG TCCAGTATGTACTCG TERM 430 807657 - 807646 - G 75 -5.8 -4.59773 | overlap 807648 TCCCATGGCCAAAAA GGCT GCGT AGCC GAAGTCGACGTACCC Pcal_0847 808685 - 807810 - | inner-membrane translocator Pcal_0848 810098 - 808686 - | extracellular ligand-binding receptor TERM 431 810294 - 810278 - H 72 -7.3 -4.27512 | opp_overlap 810280 GCTTATAATAAATAA GACGTAA CAC CTACGTC AGAGGAGGTACGATT TERM 432 810747 - 810761 + H 70 -10 -3.24747 | TGGCGGAGTGTGGTA GCCGTT ATA AACGGC TTAGTGGTCTGCCCA TERM 433 810996 - 811017 + H 79 -2.4 -5.24129 | opp_overlap 810997 811000, overlap 810997 811000 TATTAGTGAAATAAA TCATTTTT TATTGT AAAAATGG TTTTTTGTGAAAAGG Pcal_0849 811069 - 812214 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pcal_0850 812211 - 812696 + | hypothetical protein Pcal_0851 812774 - 813379 + | hypothetical protein TERM 434 813372 - 813362 - f 70 -5.4 -4.31329 | TTAAAAATCTTAAAA GAGA TAT TCTC GCGTTGAAATATAAC TERM 435 814365 - 814342 - g 71 -8 -4.07568 | opp_overlap 814347, overlap 814346 GGCTCGCCGTTAAAA CCGACGGTGC CGCC GCCGCGTCGG GCGCAGTGGCGGACG Pcal_0852 813447 - 814865 + | hypothetical protein Pcal_0853 815868 - 814870 - | radical SAM domain-containing protein TERM 436 815431 - 815446 + g 75 -5.4 -4.58685 | overlap 815443 TATGGCGACGGTTCT CGTCTT CGCC AAGGCG TTTTTCGCCGCCTTT Pcal_0854 815909 - 816322 + | HEPN domain-containing protein Pcal_0855 816346 - 816669 + | DNA polymerase beta subunit Pcal_0856 817019 - 816735 - | DNA polymerase beta subunit Pcal_0857 817296 - 817036 - | HEPN domain-containing protein Pcal_0858 818802 - 817786 - | radical SAM domain-containing protein TERM 437 819904 - 819876 - H 75 -5.1 -4.62904 | opp_overlap 819877 819893, overlap 819866 819877 819880 AAATACTGCTAAAAA GCAACGGCCATGG AGC CCGCGGCCATCGT GCTTTACGCAGTCTT Pcal_0859 819885 - 820412 + | hypothetical protein Pcal_0860 820487 - 822262 + | carbon starvation protein CstA Pcal_0861 822285 - 822533 + | hypothetical protein Pcal_0862 822530 - 823534 + | arsenite-activated ATPase ArsA TERM 438 823768 - 823752 - g 70 -3.7 -4.59853 | GCAAGGCGTGAAAAA CCTCT GGGCGAT AGAGG TGCAGTACGACGACA Pcal_0863 823531 - 824514 + | arsenite-transporting ATPase Pcal_0864 824511 - 824774 + | hypothetical protein Pcal_0865 824764 - 825195 + | hypothetical protein Pcal_0866 826300 - 825158 - | tRNA-modifying enzyme Pcal_0867 826325 - 826660 + | hypothetical protein Pcal_0868 826734 - 827459 + | hypothetical protein Pcal_0869 827441 - 827737 + | hypothetical protein Pcal_0870 828097 - 829683 + | ABC transporter related TERM 439 830031 - 830021 - f 77 -8.2 -4.07885 | overlap 830022 GACCCGGGTTCAAAA GGGG GCA CCCC CTGAGAGTCCCGGCC TERM 440 830432 - 830461 + F 77 -10.1 -3.64466 | gap 1, opp_overlap 830432 GGTCTCACACATATA GGTCTCAGATTGGG AGT CCCAAT-TGCGACC TTGTCTCTGTGACGT Pcal_0871 830600 - 831394 + | beta-lactamase domain-containing protein Pcal_0872 832593 - 831391 - | amidase Pcal_0873 833310 - 832696 - | translin family protein Pcal_0874 834472 - 833597 - | hypothetical protein TERM 441 833644 - 833673 + g 90 -10.6 -4.60041 | AGAGGAGGAGTATGG GGAGGGGCAACG CCGGGC CGTAGCCCCACC TTTTTAGGAATACCT TERM 442 833847 - 833837 - G 71 -6.8 -4.18762 | overlap 833838 AACTCCCAGCGAAAA GGCT TTC AGCC TCACCACGAAGCCGA Pcal_0875 835720 - 834758 - | hypothetical protein Pcal_0876 836173 - 835748 - | signal-transduction protein Pcal_0877 836219 - 836614 + | hypothetical protein TERM 443 836759 - 836774 + T 70 -4 -4.6759 | GGGGCGTCTATGGCG GTAGTC TTGC GATTAC TTTTCTTACGGTCTT Pcal_0878 836942 - 836751 - | hypothetical protein Pcal_0879 838085 - 836979 - | chorismate synthase TERM 444 837387 - 837399 + g 78 -6.2 -4.64861 | GGAGAATGCGGCCTT GGCC AAGTC GGCC TTTATTTTGCCGAAG Pcal_0880 838870 - 838082 - | shikimate dehydrogenase TERM 445 838475 - 838510 + g 83 -14 -3.39288 | gap 1, overlap 838472 CTCGGCCTTGACTGC GGCGAAGGCGGCTGC CCTAGCC GC-GCCGCCTGCGCC TATTATTAACACGTC Pcal_0881 838923 - 839645 + | pyrroline-5-carboxylate reductase Pcal_0882 840637 - 839642 - | putative alcohol dehydrogenase TERM 446 840223 - 840207 - G 79 -13.7 -3.11634 | GTGGAGAGGACGCAA GCCGCGT AAG ACGCGGC CTCGAAGGAAACGCC TERM 447 840560 - 840578 + g 88 -11.6 -4.20696 | TCTCACCACCACGCG GCCGCGCG TCG CCCGCGGC TTTTCCACTTCCTCA Pcal_0883 841791 - 840679 - | PhoH family protein TERM 448 841213 - 841233 + g 71 -12.6 -2.64099 | overlap 841212 CACGATGTCCTTCAC GCCGAGGT CCACC ACCTCGGC CTTCTCCTCCCCCAG TERM 449 841834 - 841819 - H 70 -4 -4.6902 | overlap 841833 GCACAAGTTTAAAAA CGTTAA CAAC TCAACG CCACAGCGCGCAAGC Pcal_0884 841894 - 842307 + | NUDIX hydrolase Pcal_0885 843325 - 842387 - | NAD-dependent epimerase/dehydratase TERM 450 843433 - 843456 + r 93 -12.6 -3.99878 | opp_overlap 843427, overlap 843418 TTTTGAAGATTGCAA TCTGCAAGAT TTGA ATCTTGCAGA TTTAGTCTTGTGTGT Pcal_0886 844232 - 843669 - | hypothetical protein Pcal_0887 846397 - 844214 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 451 845567 - 845587 + g 85 -11.1 -4.0162 | opp_overlap 845564 GATTGCCAAAATTCT GCCGCCGTT GTC AACGGCGAC TTTGTAGTCTAGGAC Pcal_0888 846834 - 846394 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Pcal_0889 847646 - 846831 - | glyceraldehyde oxidoreductase medium chain Pcal_0890 848420 - 847659 - | prephenate dehydrogenase TERM 452 847800 - 847815 + g 90 -6.8 -5.03994 | CAGCGGGGCCCTCTC CGCGTA CCGT TGCGCG TTTTTGTCTCTGAGA Pcal_0891 849417 - 848428 - | 3-deoxy-7-phosphoheptulonate synthase TERM 453 848715 - 848705 - G 71 -6.8 -4.13945 | ACGTCCAGGGTAAAA CGCA GAG TGCG GTCAAACGTCCTAAT Pcal_0892 850489 - 849479 - | tyrosyl-tRNA synthetase TERM 454 849539 - 849554 + g 87 -6.8 -4.94902 | overlap 849540 GTCTTTTAAGGCTTG TGGCGA TACG TCGCCG TTTTTGTAGTCGTTG Pcal_0893 850517 - 851320 + | transketolase subunit A Pcal_0894 851314 - 852258 + | transketolase subunit B aroB 852255 - 853280 + | 3-dehydroquinate synthase TERM 455 853337 - 853376 + G 71 -11.5 -3.29144 | gap 2 AAGCCCATCTCCCAG CGG-CTCCTCCTT-GCGGG GGCC CTCGCCGAGGGGGAGACCG TTGTCAAAGGCGTGG TERM 456 854110 - 854081 - g 75 -12.1 -3.23869 | gap 1, overlap 854079 854082 TACGACGGCAGAAGA GCCACGGCTTGGGG CAC CCCC-AGCCGCGGA GTAGACGTGGACCTG TERM 457 854109 - 854082 - g 81 -15.6 -2.54 | gap 1, overlap 854081 854079 ACGACGGCAGAAGAG CCACGGCTTGGGG CAC CCCC-AGCCGCGG AGTAGACGTGGACCT Pcal_0896 853268 - 854479 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 458 855018 - 855030 + G 71 -10.5 -3.55071 | opp_overlap 855017 AGTCATGTGGAATAT GCCGC GGA GCGGC TTTGAGCAACTCTAC TERM 459 855112 - 855124 + G 75 -5.5 -4.56775 | GGGGGCAATCCCGAC GCCTT AGA GAGGC TTTTTGGGACCAGCT Pcal_0897 854662 - 855453 + | hypothetical protein TERM 460 855556 - 855584 + T 79 -2.3 -5.24989 | overlap 855560 855562 CTAGTATCTTTTTCG CCAGCTCTACTGT CTC GCGGTAGCGTTTG TTTTTTAGTATGTCC TERM 461 855560 - 855580 + T 79 -3.9 -5.10526 | overlap 855556 855562 TATCTTTTTCGCCAG CTCTACTGT CTC GCGGTAGCG TTTGTTTTTTAGTAT TERM 462 855722 - 855769 + T 77 -9.8 -3.57119 | gap 1, overlap 855717 855724 855724 GTAATAGTATCTCCC CAGCCTCGGCATAGCTGTGGGGG CTT TCTCC-CAGCTGTGCGGCGGCTC TTTGAACCATGTCTA TERM 463 855724 - 855767 + T 83 -12.4 -3.36073 | gap 1, overlap 855717 855724 855722 AATAGTATCTCCCCA GCCTCGGCATAGCTGTGGGGG CTT TCTCC-CAGCTGTGCGGCGGC TCTTTGAACCATGTC Pcal_0899 856264 - 856055 - | hypothetical protein TERM 464 856296 - 856284 - H 70 -10.5 -2.75876 | overlap 856283 856281 AAAAGCTAGAAAGAG GCCGC CCG GCGGC TTGCAAGAAAGGCTA TERM 465 856568 - 856538 - g 73 -13.2 -2.71483 | opp_overlap 856537 856538 AGAGGGGGTCAAGGA GGCGGGCGGCGC GGCGCTT GCGGCGCCCACC ATTGTGGTAAACGAC TERM 466 856971 - 856945 - g 73 -11.7 -3.04144 | gap 1 TGTTCACGGCGAACA CCATGGCCCTCT TGGC AGAGG-CCATGG GAGTCTCCCTCCTGG Pcal_0900 856335 - 858029 + | dihydroxy-acid dehydratase Pcal_0901 859073 - 858051 - | hypothetical protein TERM 467 858549 - 858524 - G 70 -2.5 -4.85599 | gap 1, overlap 858526 TCCACGTTACAAAAA TAGTGGCCCAGC TGT GCCGACCCAC-A CGCTCCCTCGTGACG TERM 468 858548 - 858526 - G 71 -7.6 -4.05067 | overlap 858524 CACGTTACAAAAATA GTGGCCCAGC TGT GCCGACCCAC ACGCTCCCTCGTGAC TERM 469 859068 - 859093 + g 71 -10.5 -3.58305 | gap 1 GGCCAGCTTGATCCT CTTC-ACGGGTG TAC CGCCCGTAGAAG TTTAAGAGGTTACTT Pcal_0902 860125 - 859103 - | hypothetical protein Pcal_0903 860788 - 860270 - | hypothetical protein Pcal_0904 863049 - 860785 - | hypothetical protein Pcal_0905 863705 - 863046 - | ArsR family transcriptional regulator Pcal_0906 864223 - 863726 - | Miro domain-containing protein Pcal_0907 864582 - 864220 - | hypothetical protein Pcal_0908 864989 - 864579 - | hypothetical protein Pcal_0909 866209 - 864977 - | hypothetical protein TERM 470 865346 - 865367 + g 75 -8.7 -4.0641 | GCTTCCGTTGGCCAC CACGACCCT CCTC AGGGTGGTG TTTATATAGCTGGCG Pcal_0910 866826 - 866212 - | hypothetical protein Pcal_0911 868246 - 867362 - | chorismate mutase TERM 471 867475 - 867485 + g 100 -8.2 -5.56673 | CGTCGTATATTGGGA GGCC GGC GGCC TTTTTTATTCTGCCT TERM 472 867508 - 867526 + g 72 -6 -4.28548 | overlap 867509 TTCTGCCTATGTCTC TGCAGATT TCT AGTCTGCG TTTTAGTAGGTGCAT TERM 473 867842 - 867859 + g 72 -6.2 -4.3739 | GGCTATTTTCACCAC GTCGCC CACCTC GGCGGC TTTTCTGCCCCACTG TERM 474 868204 - 868174 - G 88 -16.1 -3.05816 | opp_overlap 868174 CCAGCCTGTACTCAA CGCAGGGCGTCGG CGCCT CCAGCGCCCTGCG TATGTCTGCCACGCC TERM 475 868174 - 868204 + g 87 -16.1 -2.98823 | opp_overlap 868174 CCAGCCTGTACTCAA CGCAGGGCGTCGG CGCCT CCAGCGCCCTGCG TATGTCTGCCACGCC TERM 476 868709 - 868721 + Gr 70 -4.1 -4.58395 | CGAGGCGTCTGAGGG GAGGT ACC ACTTC TTTTTCGAGGCTGGG TERM 477 869331 - 869320 - gR 70 -5.8 -4.15006 | AGACCGAGGTCAAAA TGGC GCCT GCCA AGGCCGCGCTGAGGA Pcal_0913 870135 - 869314 - | hypothetical protein Pcal_0912 868299 - 869372 + | anthranilate synthase TERM 478 869463 - 869496 + gF 78 -12.3 -2.89742 | ACTTCATCCAGCCCG GGCCCCTCAGGGGCC TGGC GGCCTCTAGGAGGCC TCTGTGGCGCTTCCA TERM 479 870647 - 870657 + G 76 -6.8 -4.46212 | GTGAGGGAGCTTGTG GACG TGG CGTC TTTTGTCATAAGCGA Pcal_0914 870191 - 871189 + | L-aspartate aminotransferase Pcal_0915 871186 - 872001 + | shikimate kinase Pcal_0916 872269 - 872006 - | hypothetical protein Pcal_0917 874601 - 872550 - | Alpha-glucosidase TERM 480 873426 - 873467 + g 91 -13 -3.96148 | CGCCTCTAGGGCCTT GTAGGTGGCCTCTGCCTC GTAGTA GGGGTAGAGGCCACGCAC TTTCTCGTGGGGCAC Pcal_0918 874937 - 874623 - | hypothetical protein rpl37ae 874992 - 875300 + | 50S ribosomal protein L37Ae Pcal_0920 875276 - 875818 + | ribosomal biogenesis protein, containing Brix domain Pcal_0921 875811 - 876050 + | hypothetical protein Pcal_0922 876424 - 876951 + | hypothetical protein TERM 481 876940 - 876952 + F 70 -4.1 -4.65895 | CGGTGGTACGTGGTG GCTAG GTT TTAGC TTTTTAAGTGGGGCC Pcal_0923 876980 - 877744 + | beta-aspartate methyltransferase Pcal_0924 878375 - 877722 - | Mn2+-dependent serine/threonine protein kinase Pcal_0925 878470 - 879537 + | radical SAM domain-containing protein Pcal_0926 879791 - 879534 - | hypothetical protein Pcal_0927 880746 - 879862 - | hypothetical protein TERM 482 880616 - 880632 + g 71 -7.9 -4.07568 | opp_overlap 880608 TTGAACACGGGGCCT GAGGTGG AGG CCACCAC TTTTACGCCGCGCGC TERM 483 881405 - 881428 + G 79 -5.2 -4.82901 | overlap 881391 TGCGGCAGAGACGTT CTGCGCTTGT ATAG GCAAGAGCGG TTTTTCTCAAGAAAG Pcal_0928 880982 - 881524 + | hypothetical protein Pcal_0929 882403 - 881513 - | phosphoesterase domain-containing protein TERM 484 881962 - 881942 - G 71 -10.3 -3.51137 | AAGGAGCTTAGACAA GGCGCGGAG AGT CCCCGCGTC AGCCCTCTTCAGCCC TERM 485 882240 - 882219 - G 71 -10.1 -3.53091 | ACGTCTCTGGGCAAA TCCTCGGAG CATC CGCCGAGGA GAGATCCCTCTGGGC Pcal_0930 882660 - 882388 - | hypothetical protein Pcal_0931 883037 - 882660 - | prefoldin, beta subunit Pcal_0932 883913 - 883089 - | exosome complex RNA-binding protein Rrp42 Pcal_0933 884653 - 883913 - | exosome complex exonuclease Rrp41 Pcal_0934 885357 - 884650 - | exosome complex RNA-binding protein Rrp4 Pcal_0935 886055 - 885357 - | putative RNA-associated protein TERM 486 885800 - 885819 + g 80 -9.2 -4.12397 | overlap 885783 885801 885803 TCCTCTGCTCAGCCG TGAGGGGG ATTT CCCCCTCC TTTATGATTATCTCC TERM 487 885801 - 885818 + g 76 -12.7 -3.06715 | overlap 885783 885800 885803 CCTCTGCTCAGCCGT GAGGGGG ATTT CCCCCTC CTTTATGATTATCTC TERM 488 885909 - 885938 + g 80 -9.4 -4.12532 | overlap 885888 885888 TAGGCCCTTCTTCGC GTCCTTGTACAC CTCCTC GTGTATGAGGAC TTTGTCTATCCCCAG Pcal_0936 886139 - 886867 + | proteasome subunit alpha TERM 489 886871 - 886843 - T 78 -8.1 -4.33621 | overlap 886846 886861 886862 GACCGAATTAATAAA CAAGCTCGGCCTT AAG AAGGCCTAGCATA GGCGGAGCAGCACGG TERM 490 886868 - 886846 - T 93 -12 -4.27694 | overlap 886843 886861 886862 CGAATTAATAAACAA GCTCGGCCTT AAG AAGGCCTAGC ATAGGCGGAGCAGCA Pcal_0937 887124 - 886864 - | hypothetical protein TERM 491 887332 - 887360 + G 77 -13.9 -2.89177 | opp_overlap 887334, overlap 887334 GAGGTGAAGTTGGAA GACTGCGAGGCGT TAG ACGCCTTGAAGTC TCTGCTGTCTAGGCT Pcal_0938 887164 - 887580 + | hypothetical protein Pcal_0939 887603 - 887827 + | hypothetical protein Pcal_0940 888765 - 887848 - | hypothetical protein TERM 492 889365 - 889377 + G 72 -4.7 -4.57341 | AGAGAGGCCTCGACC CGGCG CAT CGCGG TTTTTAGGCCGGCTT Pcal_0941 888802 - 889674 + | hypothetical protein Pcal_0942 889810 - 891390 + | DNA topoisomerase VI subunit B Pcal_0943 891429 - 892532 + | DNA topoisomerase VI subunit A Pcal_0944 892583 - 893596 + | phosphate uptake regulator, PhoU Pcal_0945 894062 - 893565 - | hypothetical protein Pcal_0946 894853 - 894059 - | HxlR family transcriptional regulator Pcal_0947 894926 - 895204 + | chromatin protein TERM 493 896230 - 896218 - g 75 -5.5 -4.62336 | overlap 896219 AGGGGATGCTAAAAA CGCCA TTT TGGCA GCCTTCGCCGCTCAC Pcal_0948 895223 - 896500 + | UbiD family decarboxylase Pcal_0949 896535 - 897641 + | aconitase subunit 1 Pcal_0950 897834 - 898190 + | aconitase subunit 2 Pcal_0951 899188 - 898415 - | N-glycosylase/DNA lyase TERM 494 899073 - 899041 - GT 84 -10.6 -3.76373 | CGTTCAACATCGAAA GAGAGGCGCAGA CCTCCTCCC CCTGCGCCTCCC ACACTCTACACACGG Pcal_0952 900194 - 899154 - | DNA primase large subunit Pcal_0953 901295 - 900225 - | von Willebrand factor, type A TERM 495 900332 - 900367 + g 100 -13.4 -5.03314 | overlap 900324 900334 TCTCAACCGCCACGG CGTGGAGTCTCTTGAA CTTT TTCACGAGACTCCAAG TTTTTTCAACGTCGG TERM 496 900334 - 900365 + g 80 -14.6 -2.76422 | overlap 900324 900332 TCAACCGCCACGGCG TGGAGTCTCTTGAA CTTT TTCACGAGACTCCA AGTTTTTTCAACGTC Pcal_0954 902211 - 901288 - | ATPase Pcal_0955 902274 - 903560 + | hypothetical protein Pcal_0956 904410 - 903640 - | metallophosphoesterase TERM 497 904474 - 904452 - R 71 -11.2 -2.96274 | overlap 904447 TTTTTTAGAAGCAGA TCCACGGCGG CCT CCGCCATGGC GAGCGTGGCAGGCGA Pcal_0957 904960 - 904427 - | hypothetical protein Pcal_0958 905583 - 905062 - | ribosomal-protein-alanine acetyltransferase Pcal_0959 905592 - 908450 + | hypothetical protein Pcal_0960 908440 - 908946 + | hypothetical protein TERM 498 909438 - 909402 - g 78 -4.3 -4.87273 | opp_overlap 909428, overlap 909404 AAGATTGGAGAAAAA GAGGTGGCCCGCC GCCTGCTCCAA GGCGAGCCCCCTG GCTCCTACTTAGAGC Pcal_0961 908946 - 909689 + | hypothetical protein TERM 499 910186 - 910167 - g 72 -4.8 -4.67556 | overlap 910168 910169 AGAAGACTTGAAAAA GCTCGGCG GCCT CGACGTGC CGCCGGATCAGATCG TERM 500 910701 - 910690 - g 72 -5.8 -4.4267 | opp_overlap 910692 GTCCAAAAGGTAAAA CTCG CCAA CGAG GAGATGGTGTATTGC Pcal_0962 909910 - 911091 + | aminotransferase TERM 501 911120 - 911098 - T 72 -6.8 -4.21275 | opp_overlap 911106, overlap 911091 911101 GCAACCTAGCTAAAA CAGCCGCGGC CTT GGCGCGGGCG AGTCCCCGCTAGGAC Pcal_0963 911710 - 911129 - | hypothetical protein Pcal_0964 911735 - 912637 + | radical SAM domain-containing protein Pcal_0965 912662 - 912967 + | hypothetical protein Pcal_0966 912996 - 913949 + | aldo/keto reductase TERM 502 914054 - 914023 - T 81 -9.4 -4.09864 | gap 1, opp_overlap 914050 ACCTACGGGTTAAAA GCCCGCCGCTCTAAC CGG GCT-GAGCTACGGGC CCCACCCGTGTCTAA Pcal_0967 915060 - 914350 - | hypothetical protein TERM 503 914594 - 914622 + g 75 -8.8 -3.95073 | opp_overlap 914596 ATGACTACCCCGAGA GACGCCACTCTC TCAAT GAGCGTGGGGTC TTTGTAAGTCTCGCC Pcal_0968 915099 - 915452 + | hypothetical protein Pcal_0969 915487 - 915690 + | hypothetical protein Pcal_0970 916586 - 915687 - | asparaginase TERM 504 915978 - 915966 - G 71 -6.9 -4.13767 | opp_overlap 915966 915973 GTTCTCAGCCCAAAA GCCCG CCC CAGGC AGTGGGCTATCTCCC rps4p 917093 - 916614 - | 30S ribosomal protein S4 rps13p 917585 - 917124 - | 30S ribosomal protein S13P Pcal_0973 919029 - 917614 - | binding-protein-dependent transport systems inner membrane component Pcal_0974 920096 - 919026 - | binding-protein-dependent transport systems inner membrane component Pcal_0975 922751 - 920148 - | oligopeptide binding protein, putative TERM 505 922892 - 922872 - R 76 -4 -4.97405 | gap 1 AGCTATAAAAATAAA CAACGG-GT CTAT ACACCGCTG ATATCCGCACTGAGA Pcal_0976 924126 - 922987 - | pullulanase TERM 506 923761 - 923740 - G 78 -6.5 -4.56597 | gap 1, overlap 923742 GGCTTCGTCGAAAAA CG-CGTTGCC GGC GGCCACGTCG CCGTCGTCGGGCCTC TERM 507 924075 - 924061 - G 72 -6.4 -4.32177 | CGATTGTACAACAAA TACGCC CTG GGCATA TAACAACACAGCCGA TERM 508 924502 - 924512 + H 77 -8.2 -4.00934 | overlap 924509 GGGTTTTTAACTAGT GGCG TTT CGCC TTTGGTGTTTGAGGT TERM 509 924677 - 924694 + G 70 -2.7 -4.82901 | gap 1, overlap 924681 GCGTCGAGTTTTCTC TCGACGAC GGG GT-GTCGG TTTTTATCCCCCGCC TERM 510 924868 - 924889 + G 74 -7.9 -4.19276 | opp_overlap 924864, overlap 924864 924884 CTTGTGAAAAGGGCC CGCGGCATT TTTG AGAGCCGCG TTTTGAGGCTTTTGG Pcal_0977 924517 - 924942 + | hypothetical protein Pcal_0978 925085 - 926158 + | putative ATP binding protein TERM 511 926174 - 926163 - f 79 -3.6 -5.07567 | overlap 926164 TCACAGCTTAAAAAA CCCC CAGC GAGG CTATTACAAACCTCT TERM 512 926719 - 926697 - gf 73 -3.2 -4.72272 | CGGCGCGAGGAAAAA CGGGGCCCCT CTA ACGCGCCGCG GCGGTAGTAGAATAG Pcal_0979 926281 - 927048 + | D-fructose 1,6-bisphosphatase Pcal_0980 927017 - 927391 + | zinc finger SWIM domain-containing protein TERM 513 927499 - 927512 + G 70 -4.5 -4.4715 | GCTCGAGGTTCTGAT CTCTC CCCG GAGGG TTTTGTACGTTGACA TERM 514 927678 - 927691 + G 76 -4.5 -4.85599 | gap 1, overlap 927668 927667 TCTGTGGAGGACCGG CCGAGG TCC CC-CGG TTTTTCTACCGTGAC Pcal_0981 927470 - 928462 + | hypothetical protein Pcal_0982 928494 - 929156 + | phosphoribosyltransferase Pcal_0983 930371 - 929136 - | MoeA domain-containing protein Pcal_0984 930510 - 930800 + | hypothetical protein Pcal_0985 930787 - 931512 + | geranylgeranylglyceryl phosphate synthase-like protein Pcal_0986 931656 - 931501 - | 50S ribosomal protein L39E Pcal_0987 932014 - 931688 - | hypothetical protein TERM 515 931957 - 931967 + g 87 -6.8 -4.93968 | CTGCCCTCTTTTGTA GCTC CTC GAGC TTTTTCCTTCTAAGT Pcal_0988 932490 - 932014 - | 30S ribosomal protein S19e Pcal_0989 932523 - 932897 + | DNA-directed RNA polymerase, subunit M Pcal_0990 932977 - 933774 + | monomeric DNA polymerase sliding clamp Pcal_0991 933771 - 934709 + | DNA primase small subunit Pcal_0992 934702 - 935187 + | hypothetical protein rpl44e 935279 - 935530 + | 50S ribosomal protein L44e rps27e 935535 - 935738 + | 30S ribosomal protein S27e Pcal_0995 935759 - 936559 + | translation initiation factor IF-2 subunit alpha Pcal_0996 936792 - 936556 - | H/ACA RNA-protein complex component Nop10p Pcal_0997 939128 - 936789 - | oligosaccharyl transferase, STT3 subunit TERM 516 938663 - 938649 - G 73 -12.8 -2.70932 | overlap 938658 938659 CTCGTCGTCGAACCA CGCGGC AAA GCCGCG CTCAATGAAGGCGGG Pcal_0998 940088 - 939552 - | hypothetical protein Pcal_0999 940129 - 941103 + | hypothetical protein TERM 517 941112 - 941129 + F 93 -2.6 -5.67063 | opp_overlap 941108, overlap 941108 941114 GCGGTGAACGACCTT CAGCGG CGCTGA CCGCTA TTTTTTTATAATGGG TERM 518 941114 - 941127 + F 72 -5.2 -4.47611 | opp_overlap 941108, overlap 941108 941112 GGTGAACGACCTTCA GCGG CGCTGA CCGC TATTTTTTTATAATG TERM 519 941924 - 941911 - g 75 -9.5 -3.88787 | opp_overlap 941911 941911, overlap 941912 CGAGATGGCGACAAA GGGGG GCTA CCCCC ACTTCATGCTCAAGG Pcal_1000 941159 - 942967 + | D-fructose-6-phosphate amidotransferase Pcal_1001 942967 - 944058 + | nucleotidyl transferase Pcal_1002 944543 - 944070 - | hypothetical protein TERM 520 944591 - 944577 - R 74 -2.1 -5.10033 | overlap 944578 GGAATATAAACAAAA CTCAC TAGAG GTGAA TACGGCTGTGGAGAA Pcal_1003 945693 - 944581 - | major facilitator transporter TERM 521 945573 - 945559 - G 74 -7 -4.33928 | overlap 945568 945569 CAGCCCAAACACAAA GCCGAC GAA GGCGGC CGAGGCGCCGAGGTA TERM 522 945617 - 945568 - G 86 -14.2 -3.21194 | gap 1, overlap 945559 945569 945596 945598 CACAAAGCCGACGAA GGCG-GCCGAGGCGCCGAGGTAT GCCAA ATACTGCGGCGCCGCGGCGCGCA TACCCTCGTAAAGCC TERM 523 945616 - 945569 - G 87 -17.7 -2.52234 | gap 1, overlap 945559 945568 945596 945598 ACAAAGCCGACGAAG GCG-GCCGAGGCGCCGAGGTAT GCCAA ATACTGCGGCGCCGCGGCGCGC ATACCCTCGTAAAGC TERM 524 945658 - 945645 - G 70 -3.7 -4.58395 | GCCAGTCTGCAAAAA GGGAC ACTA GGCCC AGGAGCAATATGAGG Pcal_1004 947101 - 945680 - | major facilitator transporter TERM 525 945761 - 945746 - G 73 -3.2 -4.72986 | TAGCGTGATTAAAAA CATGGC GGTG GCTATG TCGATGTTTATTACG TERM 526 946598 - 946577 - G 75 -5.8 -4.60487 | opp_overlap 946577 946579 946582 TACCATTGCCAAAAA CACGGCCA AGGGCG TCGCCGTG TGGTATGTAGCTCTC Pcal_1005 949460 - 947094 - | hypothetical protein TERM 527 947201 - 947178 - G 75 -11.8 -3.23216 | gap 1 TGGCACTACTACGAA GAGGTC-GAGG CCG CCTCTGACCTC CACTGGCACAGTGAT TERM 528 948015 - 947999 - G 75 -12.3 -3.26471 | GCACTGGCACATTAA CCTCTGC GTT GCAGAGG GGCTTAAGCGGAGTC Pcal_1006 950831 - 949626 - | hypothetical protein Pcal_1007 951554 - 951333 - | PaREP6 domain-containing protein/PaREP6 domain-containing protein Pcal_1008 952051 - 951551 - | hypothetical protein Pcal_1009 952268 - 952041 - | PaREP6 domain-containing protein/PaREP6 domain-containing protein TERM 529 952572 - 952615 + r 100 -14.5 -4.04806 | opp_overlap 952565 GGGAGAGACGCCGAG GCGGGCGCCG-CCCGGGGGCG TCGT CGGTCCCGGGTCGCCGCC-GC TTATTTCCTGTAGCG Pcal_1010 953621 - 952653 - | peptidase M24 Pcal_1011 953992 - 953618 - | hypothetical protein Pcal_1012 954357 - 953989 - | CopG family transcriptional regulator Pcal_1013 954404 - 954862 + | riboflavin synthase TERM 530 955023 - 955081 + T 72 -8.9 -3.81488 | gap 3, opp_overlap 955023 CACGAGTTTTAGAAC GGCGG-CTACGGCAA-CTGC-GCACGCC CCCCAC GCCCCGCCGCAGGTTGCCGTGGTCCGCC TTCTCTTTACAGCAG Pcal_1014 955780 - 955088 - | hypothetical protein TERM 531 955813 - 955801 - R 72 -10.5 -3.02043 | AACGGCTTTTGAATA CGCCG CCT CGGCG ATGTCGGCGGCGAAT Pcal_1015 956670 - 955777 - | phosphate uptake regulator, PhoU Pcal_1016 957386 - 956748 - | phosphoserine phosphatase TERM 532 957331 - 957296 - G 73 -11.2 -3.38046 | gap 1, overlap 957294 957327 CGTCCACTCCAAATA CCGCGTGTAGCCTCTGC CAG GCAGAGG-TAAACGGGG TCACGACGCCGTCGA Pcal_1017 957623 - 957387 - | ferredoxin Pcal_1018 958164 - 957703 - | methylated-DNA--protein-cysteine methyltransferase Pcal_1019 958191 - 958463 + | hypothetical protein Pcal_1020 958960 - 958460 - | hypothetical protein dcd 959061 - 959591 + | deoxycytidine triphosphate deaminase Pcal_1022 959650 - 960222 + | hypothetical protein TERM 533 961135 - 961152 + G 78 -4.1 -4.94992 | overlap 961138 TTGGCATATTTCTAT CTCCTGT ACTC ACAGTAG TTTTTGTGACTTTGA Pcal_1023 960219 - 961583 + | hypothetical protein TERM 534 961594 - 961612 + T 79 -3.7 -5.04597 | overlap 961595 AGTAGGTCCACGTCC TCTGGGC AGGCG GCCCGGC TTTTTGTATATAGGT Pcal_1024 962408 - 961572 - | bis(5'nucleosyl)-tetraphosphatase, ApaH TERM 535 961638 - 961660 + g 81 -8.5 -4.26792 | gap 1, overlap 961641 961650 TAGGTCAAATACCTC TACGCCGTCG CTGA CGACGGC-TA TTTTAGGCTTTGTCT TERM 536 961641 - 961658 + g 84 -12.7 -3.72407 | overlap 961638 961650 GTCAAATACCTCTAC GCCGTCG CTGA CGACGGC TATTTTAGGCTTTGT Pcal_1025 963100 - 962390 - | TatD-related deoxyribonuclease TERM 537 962580 - 962594 + g 74 -2.1 -4.88736 | gap 1 CTGTCCGCAGCTGCC GCGACC TCTT GGT-GC TTTTTCTGAATGGTC TERM 538 963146 - 963126 - R 85 -6.7 -4.83169 | opp_overlap 963136 963138, overlap 963128 AGCCCCGTATAAAAA CACCTTGCC CTG GGCAGGGGG CCGGCCTCATTTTGA TERM 539 963144 - 963128 - R 74 -7.9 -4.03995 | opp_overlap 963136 963138, overlap 963126 CCCCGTATAAAAACA CCTTGCC CTG GGCAGGG GGCCGGCCTCATTTT Pcal_1026 965001 - 963109 - | molybdopterin oxidoreductase Pcal_1027 965757 - 965029 - | ABC transporter related TERM 540 965706 - 965734 + g 100 -14.6 -4.38712 | TGACCCCCTTCACCA CCTCGTGGTCGC CGTAT GCGACCACTAGG TTTTCTACGACTACG Pcal_1028 966459 - 965761 - | polar amino acid ABC transporter, inner membrane subunit Pcal_1029 966492 - 966884 + | hypothetical protein Pcal_1030 966888 - 967094 + | hypothetical protein Pcal_1031 968365 - 967091 - | glutamate dehydrogenase (NAD) Pcal_1032 968479 - 969369 + | glucokinase rpl15p 969421 - 969891 + | 50S ribosomal protein L15P Pcal_1034 969891 - 971258 + | preprotein translocase subunit SecY Pcal_1035 971297 - 971425 + | hypothetical protein Pcal_1036 971426 - 972247 + | hypothetical protein Pcal_1037 973448 - 972219 - | nucleotidyl transferase Pcal_1038 974940 - 973486 - | starch synthase TERM 541 974055 - 974040 - G 77 -2.4 -5.10208 | overlap 974042 CAACCGCAAGAAAAA GCGCCC CTCC AGGCTC TACGTGTCCCACGGC Pcal_1039 976300 - 974927 - | Alpha-amylase TERM 542 975602 - 975637 + g 72 -9 -3.86897 | gap 1, opp_overlap 975601 CACGGCGATAAGCAC TACGTCCCCCGGCGTTG CCT CAA-GCCAGGCGGCGTA TTTGTCGGCGGTCAA Pcal_1040 976386 - 978212 + | aldehyde ferredoxin oxidoreductase TERM 543 978440 - 978430 - g 74 -8.2 -4.10657 | TTACAGGTTCGAAAA CGGC GAG GCCG TGCCGGTGGAGGAGG TERM 544 978819 - 978835 + G 70 -3.6 -4.56597 | overlap 978808 CGCCGTGGGGCCATC CCGCCT TCTCT AAGCGG TTTTTCAAAGAGGAA TERM 545 979036 - 979000 - g 77 -10.8 -3.86015 | gap 1 TAGGCCTGTGACAAA CGCCGTGGAGGTGCCCC GCTG GGAGCACC-CCAAGGTG TCCAGGGTCAAAAGC Pcal_1041 978260 - 979717 + | glycosyl transferase, group 1 TERM 546 979730 - 979720 - f 77 -3.2 -5.05116 | CTATAAAGAATAAAA GCGA CAC TCAC ACTTCTCTGTGATAC TERM 547 980058 - 980073 + G 71 -6.8 -4.18018 | CAGTGAGGGTGCACA GGGTGG GCGA CCATCC TTTTACGTCGCGGGA TERM 548 980656 - 980629 - g 71 -11.3 -3.28712 | opp_overlap 980616 CGCCGCGGTCGAGAA GGGCCTCGACA TGCCGG TGTTGAGGCCC CTCATCGGCATGGAC Pcal_1042 979739 - 981160 + | thiamine biosynthesis protein ThiI Pcal_1043 981394 - 982353 + | putative mRNA 3-end processing factor Pcal_1044 982502 - 983788 + | basic membrane lipoprotein Pcal_1045 983788 - 985179 + | ABC transporter related Pcal_1046 985176 - 986138 + | inner-membrane translocator TERM 549 986285 - 986300 + G 76 -11.8 -3.41051 | GTGGCCGCCCTTCTG GGCCCC CCTT GGGGCC TTCTACTCGCCGTGG Pcal_1047 986129 - 986986 + | inner-membrane translocator TERM 550 987124 - 987112 - T 70 -4.7 -4.53303 | overlap 987113 GACGCCGATATAAAA CGGTG GAG CCCCG GCCGGGATTTGAATT TERM 551 987163 - 987199 + T 85 -14.3 -2.72144 | opp_overlap 987192 987193, overlap 987143 987177 987193 GTCCCCTCCCGGGGC CGCCCGCTGTCTCGGCG GCC CGCCTACAAGGCGGGCG CTTTGGCCCAGCTAC TERM 552 987177 - 987200 + T 100 -14.6 -3.53811 | gap 1, opp_overlap 987192 987193, overlap 987163 987193 CCGCCCGCTGTCTCG GCGGCCCGCCT ACA AGGCGGG-CGC TTTGGCCCAGCTACC Pcal_1048 987745 - 987407 - | hypothetical protein Pcal_1049 987870 - 990221 + | DNA polymerase II Pcal_1050 991436 - 990213 - | DNA primase TERM 553 992028 - 992018 - g 70 -4.6 -4.55689 | overlap 992019 ACTACCCAGACAAAA CCGC CTC GCAG CAGTTGATGCCCGGA Pcal_1051 991504 - 992379 + | methionine aminopeptidase Pcal_1052 992418 - 994067 + | thermosome subunit Pcal_1053 994600 - 994064 - | hypothetical protein TERM 554 994227 - 994238 + g 75 -3.6 -4.83615 | ATGAAGAACCTCGCG GCCT CTAG GGGC TTTTTCTCGCGCCTG TERM 555 994319 - 994340 + g 77 -2.3 -5.14477 | gap 1, overlap 994322 TTCCTCGTCGTACTC GTCCTTAAGC GCC GCT-AAGTAC TTTTTTGCGTATATC Pcal_1054 995618 - 994590 - | type II secretion system protein E Pcal_1055 996075 - 995611 - | transcription factor TFIIB, cyclin-related TERM 556 996184 - 996194 + H 72 -6.8 -4.24204 | CTGGGGCGGGCGAGG CTCC TAT GGAG TTTTCCCTCTCAGTA Pcal_1056 996189 - 996503 + | hypothetical protein Pcal_1057 996533 - 996967 + | like-Sm ribonucleoprotein, core Pcal_1058 999890 - 997140 - | DEAD/DEAH box helicase domain-containing protein Pcal_1059 1000631 - 999996 - | fumarase beta subunit TERM 557 1001332 - 1001315 - g 75 -9.8 -3.92832 | AAAGCTCGCAAAGAA GGCCGC TGTACT GCGGCC AGTGGGCTCCCGCCA Pcal_1060 1000707 - 1001573 + | fumarase alpha subunit Pcal_1061 1001573 - 1002016 + | flavin reductase domain-containing protein Pcal_1062 1002269 - 1001991 - | MoaD family protein Pcal_1063 1002691 - 1002308 - | hypothetical protein Pcal_1064 1002735 - 1003631 + | iron-sulfur cluster loop containing protein Pcal_1065 1003654 - 1004616 + | hypothetical protein Pcal_1066 1005118 - 1004606 - | hypothetical protein TERM 558 1005533 - 1005515 - H 100 -3.2 -5.63517 | overlap 1005508 TCTCCAAACAAAAAA CTTTGT AGTGGTA ACAAAG AAAAGGGTAACTGCG Pcal_1067 1005663 - 1006226 + | hypothetical protein Pcal_1068 1006192 - 1007256 + | radical SAM domain-containing protein Pcal_1069 1008431 - 1007253 - | hypothetical protein Pcal_1070 1009826 - 1008468 - | hypothetical protein Pcal_1071 1010461 - 1009823 - | hypothetical protein TERM 559 1010039 - 1010018 - G 71 -10.1 -3.54129 | CATACCGTTTGTAAA CCCCGGTAT GTGA ATGCCGGGG AGGCCGTCGAGGTAC Pcal_1072 1011027 - 1010458 - | class II aldolase/adducin family protein Pcal_1073 1012385 - 1011027 - | geranylgeranyl reductase Pcal_1074 1013094 - 1012417 - | beta-lactamase domain-containing protein Pcal_1075 1013409 - 1013170 - | hypothetical protein Pcal_1076 1013832 - 1013431 - | holliday junction resolvase Pcal_1077 1014317 - 1013829 - | hypothetical protein TERM 560 1014181 - 1014167 - G 73 -11.4 -3.34962 | opp_overlap 1014164 CCCTAGACTTTACAA CGACGC CGC GCGTCG CAGTTCTAAGGGCCA Pcal_1078 1014913 - 1014314 - | transcription factor Pcal_1079 1014992 - 1015324 + | 30S ribosomal protein S25e Pcal_1080 1015977 - 1015321 - | hypothetical protein Pcal_1081 1016225 - 1016001 - | putative regulatory protein Pcal_1082 1017324 - 1016272 - | hypothetical protein Pcal_1083 1017725 - 1017321 - | hypothetical protein Pcal_1084 1018866 - 1017760 - | acetyl-CoA C-acyltransferase TERM 561 1017946 - 1017960 + g 85 -9.2 -4.46212 | opp_overlap 1017929 GCCGCTGTAGTTCAC GGGGGC GTT GCCCTC TTTTATGATGAGGGG TERM 562 1019089 - 1019139 + G 89 -16.1 -3.37354 | gap 1 GCGGTGCAAGTCCCC GTGGGCGT-GGCGGGGCCCCTCCT CGTG AGGGGGGACTACGCCAACGGCCAC TTCTACGTACCTCTC Pcal_1085 1018903 - 1020102 + | 3-hydroxy-3-methylglutaryl-coenzyme A reductase Pcal_1086 1020497 - 1020087 - | hypothetical protein TERM 563 1020984 - 1020964 - g 73 -12.5 -2.73364 | GGTCTACGCGAAGGA CCCCCTCAC TGT GGGAGGGGG GAAGAAGTCCTTTAG TERM 564 1022059 - 1022074 + G 78 -6 -4.61633 | opp_overlap 1022038, overlap 1022044 CGCCGTGGTGCTGGA CCCGCC TCTC GGCGTG TTTTTCAACGTGTAT TERM 565 1022921 - 1022908 - g 70 -2.3 -4.82667 | overlap 1022911 1022912 CGAGTACACCAAAAA CAAGC CGCA GCATG TGAAGGCGGCAGAGC Pcal_1087 1020590 - 1023151 + | DNA polymerase I Pcal_1088 1023562 - 1023143 - | hypothetical protein Pcal_1089 1024073 - 1023582 - | CDP-alcohol phosphatidyltransferase Pcal_1090 1024622 - 1024140 - | hypothetical protein TERM 566 1024590 - 1024603 + g 73 -3.1 -4.82901 | gap 1 GTCTATAGTCCAGGG GCAGAC AGT GTC-GC TTTTTATCAGGAAGC Pcal_1091 1024921 - 1024619 - | 30S ribosomal protein S26e Pcal_1092 1026411 - 1024948 - | prolyl-tRNA synthetase Pcal_1093 1028488 - 1026947 - | hypothetical protein Pcal_1094 1029488 - 1028880 - | hypothetical protein Pcal_1095 1029775 - 1029479 - | hypothetical protein Pcal_1096 1030220 - 1029840 - | endoribonuclease L-PSP TERM 567 1029895 - 1029924 + g 74 -11.4 -3.51825 | gap 1 TCTCGCGGCAGTCTC GCCGCCTGCACAG TGACT CTG-GCTGGCGGC TTCTCCTTGAAGTAC Pcal_1097 1031176 - 1030262 - | hypothetical protein TERM 568 1031038 - 1031024 - G 76 -12.8 -3.14344 | CAGCGCTGCCACTAA GCCGCC CAC GGCGGC GAATATGGCGATGCC Pcal_1098 1031267 - 1031872 + | isochorismatase hydrolase Pcal_1099 1031869 - 1032504 + | hypothetical protein Pcal_1100 1033488 - 1032499 - | putative RNA methylase TERM 569 1032860 - 1032894 + g 82 -13.4 -3.21276 | opp_overlap 1032855, overlap 1032857 TCGACACAGATGTAG CGCGCCCAGGGCGCGG CCT CTGCGGCCTCGGCGGG TATTGTGCCCCCGCC TERM 570 1034331 - 1034295 - g 81 -8.5 -4.37092 | opp_overlap 1034299 AGCGGCTGGAGAAAA GCGCGGAGGGCATCC TAATAGC GGGGGCCCCCGGCGC TGGGAAGACCACCTT Pcal_1101 1033535 - 1035088 + | ATPase Pcal_1102 1035092 - 1035841 + | methyltransferase type 11 Pcal_1103 1036718 - 1035855 - | RNAse Z Pcal_1104 1036761 - 1037453 + | dimethyladenosine transferase TERM 571 1038303 - 1038289 - g 75 -5.6 -4.63527 | GGAGGAGTTGAAAAA GAGGGG TGT CGCCTC CGTCGAGCTGTCCAC Pcal_1105 1037483 - 1039309 + | glutamyl-tRNA(Gln) amidotransferase subunit E Pcal_1106 1039331 - 1040581 + | rRNA biogenesis protein Nop56/Nop58 Pcal_1107 1040611 - 1041315 + | fibrillarin Pcal_1108 1042357 - 1041299 - | putative glutamate synthase subunit beta Pcal_1109 1042962 - 1042408 - | cytidylate kinase Pcal_1110 1043216 - 1042962 - | 50S ribosomal protein L34E Pcal_1111 1043294 - 1044628 + | elongation factor 1-alpha Pcal_1112 1046195 - 1044621 - | hypothetical protein Pcal_1113 1046485 - 1046234 - | hypothetical protein Pcal_1114 1047413 - 1046505 - | diphthamide biosynthesis protein TERM 572 1047289 - 1047307 + g 72 -5.8 -4.54449 | overlap 1047283 1047296 CCCCAGACGGGCCTT CCGGAGAC GGC GGCGCCGG TTTTCTCTGCGATCT Pcal_1115 1049210 - 1047420 - | DNA topoisomerase Pcal_1116 1049280 - 1049771 + | hypothetical protein Pcal_1117 1051476 - 1049728 - | DEAD_2 domain-containing protein Pcal_1118 1051508 - 1052668 + | nicotinate phosphoribosyltransferase Pcal_1119 1053772 - 1052669 - | geranylgeranyl reductase Pcal_1120 1053779 - 1054201 + | hypothetical protein Pcal_1121 1054823 - 1054185 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase Pcal_1122 1055516 - 1054863 - | hypothetical protein Pcal_1123 1056178 - 1055513 - | GTP cyclohydrolase IIA TERM 573 1056651 - 1056634 - g 74 -8.3 -4.18018 | opp_overlap 1056643 TGGCGCTATGTAAAA GTCCGCG ACCA CGCGGGC ACAGACGAGACCAGC Pcal_1124 1056265 - 1056906 + | creatininase Pcal_1125 1057060 - 1056869 - | hypothetical protein TERM 574 1057211 - 1057191 - g 90 -11.8 -4.11692 | overlap 1057173 GACGCAGTGTTAAAA GGCGCCGA GGAGG CCGGCGCC GCCGTCCAAGCGCCA Pcal_1126 1057101 - 1058111 + | histone deacetylase superfamily protein Pcal_1127 1058999 - 1058106 - | ribose-phosphate pyrophosphokinase Pcal_1128 1059760 - 1058987 - | methyltransferase type 11 Pcal_1129 1060807 - 1059779 - | translation factor SUA5 Pcal_1130 1062052 - 1060871 - | hypothetical protein TERM 575 1061808 - 1061822 + g 78 -11.4 -3.65902 | AACACCCAGACTTGC GGCGTG CCC CACGCC TTTGGCTCCACTACC TERM 576 1062288 - 1062300 + H 84 -7.7 -4.59773 | CATCCAGACGTTATT CCGTT GAA AACGG TTTTTAACAGTAGCC Pcal_1131 1062521 - 1063330 + | 6-phosphogluconate dehydrogenase, NAD-binding Pcal_1132 1063327 - 1063581 + | hypothetical protein Pcal_1133 1063581 - 1064876 + | asparaginyl-tRNA synthetase Pcal_1134 1064851 - 1065438 + | hypothetical protein Pcal_1135 1065805 - 1065401 - | hypothetical protein Pcal_1136 1066807 - 1065818 - | hypothetical protein TERM 577 1066540 - 1066519 - G 73 -13 -2.74523 | overlap 1066492 1066489 1066516 CGAGGCCGAAGACGA CCCTCGCC GCGTCA GGCGAGGG GAAGCTCAACATGCC gltX 1068512 - 1066800 - | glutamyl-tRNA synthetase Pcal_1138 1069185 - 1068502 - | nucleotidyl transferase Pcal_1139 1069238 - 1069447 + | hypothetical protein Pcal_1140 1069447 - 1069575 + | hypothetical protein Pcal_1141 1069572 - 1069997 + | hypothetical protein Pcal_1142 1069994 - 1070323 + | hypothetical protein TERM 578 1070350 - 1070338 - f 73 -4.1 -4.87037 | overlap 1070345 AATAGACAGGAAAAA GACAT CAT ATGCC TCTGATAAGGCGTAG Pcal_1143 1070346 - 1070762 + | signal-transduction protein Pcal_1144 1070759 - 1071280 + | hypothetical protein Pcal_1145 1072025 - 1071261 - | NAD-dependent deacetylase TERM 579 1071656 - 1071672 + gT 76 -5.1 -4.72272 | opp_overlap 1071638 CGTCTCGCAACGCGC CGTGG AGCTCTA CCACG TTTTTACTGCCGGCG Pcal_1146 1072549 - 1071974 - | hypothetical protein Pcal_1147 1072998 - 1072603 - | hypothetical protein TERM 580 1072807 - 1072796 - G 70 -3.6 -4.65895 | overlap 1072802 1072803 TTCTTCATCCAAAAA CACC AAGT GGCG TTTCTCGGGAATAGA Pcal_1148 1073795 - 1072983 - | extracellular solute-binding protein Pcal_1149 1075228 - 1074092 - | hypothetical protein Pcal_1150 1075280 - 1075588 + | hypothetical protein Pcal_1151 1075624 - 1075833 + | hypothetical protein TERM 581 1076013 - 1076031 + G 85 -11.6 -3.95153 | GGGGACTACCTAGCC GCGTGGGG CCG CCCCTCGC TTTCTGACTACTTCG Pcal_1152 1075830 - 1076594 + | hypothetical protein Pcal_1153 1077333 - 1076575 - | HAD family hydrolase TERM 582 1077147 - 1077160 + g 70 -3.8 -4.57353 | GTACGTAGACCGGCG GCAC TACCTC GTGC TTTTCTCTCCTAGCC TERM 583 1079206 - 1079227 + G 74 -11.5 -3.61517 | opp_overlap 1079197 GATATACGTCAACGG CACAGCCGC GGGC GCGGCGGTG TTGTTCAACAGGACT Pcal_1154 1077452 - 1079728 + | hypothetical protein Pcal_1155 1079766 - 1080164 + | hypothetical protein Pcal_1156 1080169 - 1080510 + | methionyl-tRNA synthetase, beta subunit Pcal_1157 1080500 - 1081204 + | undecaprenyl pyrophosphate synthetase Pcal_1158 1081201 - 1081815 + | hypothetical protein Pcal_1160 1084793 - 1083471 - | RNA modification protein Pcal_1159 1081841 - 1083553 + | methionyl-tRNA synthetase TERM 584 1083710 - 1083735 + gT 81 -10.3 -3.89346 | opp_overlap 1083710 1083707 1083705 CGGTTATTAACACCA CGTCGCGAGAG CCCA CCCTCGCGCCG TTTCTGAGGTGGGCC TERM 585 1083735 - 1083710 - GT 77 -12.5 -2.77523 | opp_overlap 1083710, overlap 1083707 1083705 CGGTTATTAACACCA CGTCGCGAGAG CCCA CCCTCGCGCCG TTTCTGAGGTGGGCC Pcal_1161 1085115 - 1084816 - | hypothetical protein Pcal_1162 1085150 - 1086052 + | dihydropteroate synthase Pcal_1163 1086607 - 1086020 - | hypothetical protein Pcal_1164 1087127 - 1086600 - | THUMP domain-containing protein Pcal_1165 1087180 - 1087944 + | hypothetical protein Pcal_1166 1088224 - 1088946 + | SPP-like hydrolase Pcal_1167 1089803 - 1088982 - | hypothetical protein Pcal_1168 1090288 - 1089800 - | Miro domain-containing protein Pcal_1169 1090618 - 1090403 - | hypothetical protein Pcal_1170 1091565 - 1090615 - | glycosyl transferase family protein TERM 586 1091224 - 1091188 - G 82 -10.7 -4.21194 | overlap 1091209 CGCCAGCACTGAAAA CCAGCCGGTGGCGCCGT AGA ACAGCCCCACCAGGGGG AGGGTGAGTCTCACC Pcal_1171 1092440 - 1091553 - | putative deoxyhypusine synthase Pcal_1172 1093147 - 1092437 - | hypothetical protein rps15p 1093215 - 1093670 + | 30S ribosomal protein S15P TERM 587 1093780 - 1093756 - g 70 -4.9 -4.42238 | GTACTTGAAGCAAAA CCCCTTGACCA TAT TCGTCAGGAGG AGCGTCGACGCGTAT Pcal_1174 1093691 - 1094755 + | hypothetical protein Pcal_1175 1094736 - 1094975 + | hypothetical protein Pcal_1176 1095423 - 1094962 - | hypothetical protein TERM 588 1095238 - 1095268 + g 73 -3.1 -4.72272 | gap 1, overlap 1095239 GAGGTCGTGGCTTAG CGGGC-GGGGGAAG TCCA CCTCGCCCAGCCCC TTTTTAATGGACAGA Pcal_1177 1095775 - 1095506 - | DNA-directed RNA polymerase, subunit M Pcal_1178 1095853 - 1097634 + | thiamine pyrophosphate binding domain-containing protein TERM 589 1097822 - 1097789 - gT 70 -11 -2.71731 | gap 1, opp_overlap 1097810, overlap 1097810 GCGATTTGGGAATGA GGTCTACGCCCCCGT AGTAG ACGAGGGCG-AGGCC GACGTCGTGGTTGCC Pcal_1179 1097607 - 1098170 + | indolepyruvate oxidoreductase subunit B Pcal_1180 1098941 - 1098138 - | protein of unknown function RIO1 Pcal_1181 1098986 - 1099510 + | putative RNA-processing protein TERM 590 1099534 - 1099516 - T 73 -11.6 -2.75818 | opp_overlap 1099516, overlap 1099513 1099505 1099503 AAGAGGCTAAGACGA GGCGGCGG CCT CCGCCGCT ACCTCCTTCACCGCG Pcal_1182 1100175 - 1099507 - | 30S ribosomal protein S3Ae Pcal_1183 1100257 - 1100760 + | AsnC family transcriptional regulator Pcal_1184 1100798 - 1101097 + | hypothetical protein Pcal_1185 1101121 - 1101366 + | AsnC family transcriptional regulator TERM 591 1101846 - 1101829 - g 79 -6.9 -4.65895 | TGCCCTACGTAAAAA CGGCGCT TAAC ATCGCCG TGGTAGAGCTCCCAG Pcal_1186 1101366 - 1102025 + | hypothetical protein Pcal_1187 1102053 - 1102781 + | hypothetical protein Pcal_1188 1103752 - 1102742 - | hypothetical protein TERM 592 1103833 - 1103787 - H 76 -7.8 -4.17089 | overlap 1103789 1103790 TTTAAATGCGGAAAA GAGGGTATGGGCGTGCGCGGCT TCA AGCAGCTCACCCCCATACCAGA GGCCCAAAGGGCCGT TERM 593 1103831 - 1103789 - H 100 -14.8 -3.68071 | overlap 1103787 1103790 TAAATGCGGAAAAGA GGGTATGGGCGTGCGCGGCT TCA AGCAGCTCACCCCCATACCA GAGGCCCAAAGGGCC TERM 594 1103830 - 1103790 - H 100 -18.3 -2.8012 | overlap 1103789 1103787 AAATGCGGAAAAGAG GGTATGGGCGTGCGCGGCT TCA AGCAGCTCACCCCCATACC AGAGGCCCAAAGGGC TERM 595 1104778 - 1104756 - g 71 -7.6 -4.07885 | overlap 1104772 1104773 GAGGTCTTTGTAAAA CCCGCCGTCC TAA AAATGGCGGG GGCGGCGGAGGAGCC TERM 596 1104800 - 1104772 - g 70 -4.3 -4.56597 | opp_overlap 1104794, overlap 1104756 1104773 CCGCCGTCCTAAAAA TGGCGGGGGCGGC GGA GGAGCCCCGCCCA GTAGTCAAGGCGGTT Pcal_1189 1103793 - 1105037 + | molybdenum cofactor synthesis domain-containing protein Pcal_1190 1107039 - 1105123 - | molybdenum cofactor synthesis domain-containing protein TERM 597 1105413 - 1105434 + g 73 -12.3 -3.06796 | gap 1 CCAGTTCCTCGAAGG GCTGGCCGAG CCT CTCGGCC-GC TTGCCTAAGGTAGAG Pcal_1191 1107344 - 1107036 - | hypothetical protein Pcal_1192 1107481 - 1108515 + | HtpX-2 peptidase Pcal_1193 1109263 - 1108529 - | hypothetical protein Pcal_1194 1109310 - 1109732 + | hypothetical protein Pcal_1195 1110403 - 1109912 - | hypothetical protein TERM 598 1111171 - 1111159 - g 78 -6.2 -4.61231 | TCAGATTTGCAAAAA GCGG GAGAG CCGC GCTGGTAAACGCCGT Pcal_1196 1110438 - 1111241 + | undecaprenyl pyrophosphate phosphatase Pcal_1197 1111325 - 1112455 + | natural resistance-associated macrophage protein Pcal_1198 1112452 - 1112862 + | iron dependent repressor Pcal_1199 1113474 - 1112815 - | phosphoribosylanthranilate isomerase TERM 599 1113504 - 1113528 + r 74 -8.6 -3.8591 | gap 1, opp_overlap 1113493 1113491 1113504 AATACCTCCAAAGGA GGCGGGACTAA GCCG TTGG-CCCGCC TTGTTGCTTCTGGCG Pcal_1200 1114146 - 1113511 - | hypothetical protein Pcal_1201 1114486 - 1114707 + | hypothetical protein Pcal_1202 1114751 - 1115413 + | hypothetical protein Pcal_1203 1115410 - 1116603 + | hypothetical protein TERM 600 1117382 - 1117358 - g 74 -11.4 -3.6279 | AAAGTTGCTCAACAA GCGGGGCG TGGCGCTTC CGCCCCGC GAGGAGATCTACACG Pcal_1204 1116657 - 1117487 + | hypothetical protein TERM 601 1117620 - 1117645 + G 80 -2.7 -5.27923 | gap 1, opp_overlap 1117616, overlap 1117605 1117607 GCGCTAGTAAATAGT GCTACTATACTA GCT TA-TGTGGTAGC TTTTTTATGCCCTTG TERM 602 1117740 - 1117769 + G 78 -3.6 -5.02502 | gap 2, overlap 1117746 1117747 CCACTGTTTTTCCGG CGAGTTGCTGCGGT CTTT GCCGCAGT--CTCG TTTTTGTCTGCTCTA Pcal_1205 1117563 - 1118120 + | hypothetical protein Pcal_1206 1118241 - 1119482 + | tryptophan synthase subunit beta TERM 603 1119501 - 1119474 - T 70 -4 -4.60797 | opp_overlap 1119493 1119495, overlap 1119476 TTCCTAGACATAAAA CAGCCCTAGAGC GACG GCTCTTAGGCCC TGAGCCTATAGTTGT TERM 604 1119499 - 1119476 - T 74 -8.8 -3.91674 | opp_overlap 1119493 1119495, overlap 1119474 CCTAGACATAAAACA GCCCTAGAGC GACG GCTCTTAGGC CCTGAGCCTATAGTT Pcal_1207 1119791 - 1119507 - | hypothetical protein TERM 605 1120283 - 1120313 + G 72 -6 -4.32857 | opp_overlap 1120259 CCCGCCCGAAAAGGC GGCTAGGCTCGTGG CGA CTGTGGGCTTCGCC TTTGTCTTTGCCCCA Pcal_1208 1119885 - 1120868 + | anthranilate phosphoribosyltransferase TERM 606 1121182 - 1121212 + G 85 -11.1 -4.0162 | opp_overlap 1121167, overlap 1121173 1121170 CGGGAAGGTACGGCG CCCCGTGGCCTTC TTTGT GAAGCCCAGGGGG TTTGTGCTATACGAC Pcal_1209 1120865 - 1122127 + | anthranilate synthase, component I Pcal_1210 1122118 - 1122696 + | anthranilate synthase component II trpA 1122713 - 1123435 + | tryptophan synthase subunit alpha Pcal_1212 1124084 - 1123407 - | hypothetical protein Pcal_1213 1124137 - 1124889 + | indole-3-glycerol phosphate synthase TERM 607 1125231 - 1125251 + F 76 -7.5 -4.28994 | overlap 1125232 AATCAAGTGTTAGAC GGCGGCTAA TCA TTGGCCGCA TTTTAGTACCTGATA TERM 608 1125232 - 1125250 + F 74 -11 -3.16914 | overlap 1125231 ATCAAGTGTTAGACG GCGGCTAA TCA TTGGCCGC ATTTTAGTACCTGAT TERM 609 1126112 - 1126093 - g 80 -5 -4.91977 | TAGTAAAATATAAAA TGACGAGA GAAT TCTCACCA AATGTGTTACTAATT Pcal_1214 1125318 - 1127156 + | hypothetical protein TERM 610 1128006 - 1128039 + G 72 -9.3 -3.63895 | opp_overlap 1128005 1128004, overlap 1128036 CTTCTCCACAGAACT GGCCTCCTCCACGGC CATA GCCGCGGTGCTGGCC TTTGGGCTAATTGCC Pcal_1215 1127545 - 1128453 + | cation diffusion facilitator family transporter Pcal_1216 1129413 - 1128433 - | sodium/calcium exchanger membrane region TERM 611 1129266 - 1129289 + g 77 -8 -4.36914 | opp_overlap 1129256 1129264 1129266 1129267, overlap 1129267 TGATAGGGGCAAAGA TGGCCGCAAC CCCC GTGGCGGCCC TTTTGTAACGCCAGG TERM 612 1129267 - 1129288 + g 71 -11.5 -3.21934 | opp_overlap 1129256 1129266 1129264 1129267, overlap 1129266 GATAGGGGCAAAGAT GGCCGCAAC CCCC GTGGCGGCC CTTTTGTAACGCCAG Pcal_1217 1129750 - 1129454 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pcal_1218 1131129 - 1129750 - | D-lactate dehydrogenase (cytochrome) TERM 613 1130924 - 1130950 + g 70 -2.2 -4.73388 | overlap 1130926 GAAAGGCTAGTGGAA GAGGCTAGAGGT ACA ATCTTAAGCCTG TTTTTAATAGCAGTT Pcal_1219 1131185 - 1132585 + | FAD linked oxidase domain-containing protein Pcal_1220 1132582 - 1133556 + | FAD linked oxidase domain-containing protein TERM 614 1133907 - 1133879 - g 83 -13.7 -3.57561 | CTTCAACGCCCTAAA CACGGGCCCCGGC CTC GCCTTGGCCCGCG TGGGTGGCAGCCTTG Pcal_1221 1133553 - 1134710 + | hypothetical protein Pcal_1222 1134783 - 1136237 + | hypothetical protein Pcal_1223 1136276 - 1138717 + | malate synthase Pcal_1224 1138714 - 1139631 + | hypothetical protein Pcal_1225 1139628 - 1140767 + | hypothetical protein Pcal_1226 1141510 - 1140764 - | flavin reductase domain-containing protein Pcal_1227 1142479 - 1141517 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Pcal_1228 1143444 - 1142476 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Pcal_1229 1144505 - 1143441 - | binding-protein-dependent transport systems inner membrane component Pcal_1230 1145503 - 1144505 - | binding-protein-dependent transport systems inner membrane component TERM 615 1145153 - 1145143 - G 71 -8.2 -4.09243 | overlap 1145144 TATACGCGGCTAAAA GCCC GAG GGGC AGGCCTATTACCACA Pcal_1231 1147666 - 1145513 - | extracellular solute-binding protein Pcal_1232 1148221 - 1147784 - | carbon monoxide dehydrogenase subunit G TERM 616 1148138 - 1148150 + g 83 -4.7 -5.06103 | AGGTATCAGCTTGGC CACCG CCT CGGGG TTTTTTAACAGTTCT Pcal_1233 1149567 - 1148242 - | glycerate 2-kinase Pcal_1234 1150509 - 1149586 - | hypothetical protein TERM 617 1149985 - 1149943 - G 83 -14.1 -3.16742 | opp_overlap 1149944 1149945, overlap 1149945 1149955 1149957 TTCAAGCGCCATGAA CACCGCCTCAAAGACGGCG TACCG CGCCGTGATTGAGGCGGCT TGTCTGAGGATTTTC TERM 618 1149944 - 1149984 + g 90 -16.1 -3.51563 | opp_overlap 1149943 1149945 1149955 1149957, overlap 1149945 TCAAGCGCCATGAAC ACCGCCTCAAAGACGGCGT ACC GCGCCGTGATTGAGGCGGC TTGTCTGAGGATTTT TERM 619 1149945 - 1149983 + g 95 -19.6 -2.70215 | opp_overlap 1149945 1149943 1149955 1149957, overlap 1149944 CAAGCGCCATGAACA CCGCCTCAAAGACGGCGT ACC GCGCCGTGATTGAGGCGG CTTGTCTGAGGATTT TERM 620 1149983 - 1149945 - G 100 -18.9 -3.14527 | opp_overlap 1149944 1149945, overlap 1149943 1149955 1149957 CAAGCGCCATGAACA CCGCCTCAAAGACGGCG TACCG CGCCGTGATTGAGGCGG CTTGTCTGAGGATTT TERM 621 1150483 - 1150471 - G 89 -6.3 -5.07275 | GTAGACATATAAAAA TGCAA ATG TTGCA CAGAAAGCCTTATAG Pcal_1235 1150519 - 1150920 + | vitamin K epoxide reductase TERM 622 1151138 - 1151117 - g 75 -4.3 -4.77036 | opp_overlap 1151124, overlap 1151118 1151119 TGGCACTAGCAAAAA CGCGGCG CTGGCGGC CGCCGTG GCGGCGCTAATGGTG Pcal_1236 1150920 - 1151195 + | hypothetical protein Pcal_1237 1151435 - 1151866 + | thioesterase superfamily protein TERM 623 1152668 - 1152696 + GT 78 -6.5 -4.57569 | GAGAGGCCTAGGCCA GGTGGCCGACGCC TTG GACCTCCGCCGCC TTTTTGAGAGACTGA Pcal_1239 1154156 - 1152660 - | alpha-isopropylmalate/homocitrate synthase family transferase Pcal_1238 1151853 - 1152719 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 624 1153135 - 1153112 - GT 78 -8 -4.35461 | overlap 1153113 TTAACAGTATCAAAA GCGCCGAGGC TGGG GCCTCGTCGA AGGAGTAGCCCTCTC TERM 625 1153134 - 1153113 - GT 77 -11.5 -3.20553 | overlap 1153112 TAACAGTATCAAAAG CGCCGAGGC TGGG GCCTCGTCG AAGGAGTAGCCCTCT Pcal_1240 1155884 - 1154631 - | hypothetical protein TERM 626 1155936 - 1155919 - H 77 -8.5 -4.0371 | CATTCCCCAGATAAA TGTTTCC TATA GGAAACA GTCTACGCCGTGCGT TERM 627 1156779 - 1156799 + G 73 -11.1 -3.38046 | overlap 1156777 TGGCCGCCATCTTCA GGGCGCC CATCGGC GGCGCCC TCTTTGCCCTCGAGG Pcal_1241 1156262 - 1157548 + | Cl- channel, voltage-gated family protein Pcal_1243 1158292 - 1158032 - | hypothetical protein Pcal_1244 1158905 - 1158339 - | hypothetical protein Pcal_1245 1158993 - 1159349 + | hypothetical protein Pcal_1246 1159366 - 1159707 + | hypothetical protein Pcal_1247 1160572 - 1159670 - | hypothetical protein TERM 628 1160391 - 1160373 - G 75 -8.8 -4.07568 | opp_overlap 1160382 CGCCCCGTCTTAAAA TCCACCAG CCT CTGGAGGA GAGTCTTCAAGTTGC TERM 629 1160538 - 1160521 - G 75 -8.4 -4.08706 | CGGTGAGCAGAGAAA GCGTGG TTTTCC CCACGC CGCCGCTGGCAGAGA Pcal_1248 1162002 - 1161157 - | hypothetical protein Pcal_1249 1162702 - 1162094 - | hypothetical protein TERM 630 1162393 - 1162371 - G 75 -9.8 -3.81307 | overlap 1162369 CCAAAAGTCAAAATA TCGGCGTAGC ACT GCTCCACCGA GCACACAGAGAAGCC Pcal_1250 1162772 - 1163668 + | hypothetical protein Pcal_1251 1164398 - 1164024 - | hypothetical protein Pcal_1252 1164911 - 1164621 - | hypothetical protein Pcal_1253 1165292 - 1164969 - | hypothetical protein Pcal_1254 1165842 - 1166921 + | Linocin_M18 bacteriocin protein Pcal_1255 1167559 - 1166918 - | hypothetical protein Pcal_1256 1168386 - 1167583 - | chromosome partitioning ATPase, ParA family protein Pcal_1257 1168911 - 1168735 - | paREP4 Pcal_1258 1169337 - 1168945 - | hypothetical protein Pcal_1259 1170373 - 1169366 - | acetylornithine deacetylase / N2-acetyl-L-lysine deacetylase Pcal_1260 1171269 - 1170400 - | peptidase S1 and S6, chymotrypsin/Hap Pcal_1261 1171322 - 1172890 + | peptidase S49 TERM 631 1172964 - 1172940 - gT 77 -12.7 -2.80016 | overlap 1172937 GTGGAGCACCAACTA CGTGGCGGGGC GGC GCCTCGCCGCG GCGGGGGCAGACCCC Pcal_1263 1174319 - 1173705 - | oxidoreductase, molybdopterin binding Pcal_1262 1172887 - 1173789 + | hypothetical protein TERM 632 1174283 - 1174257 - Gf 95 -12.2 -4.13654 | GTCGTAAACCACAAA CCGCCTCACCCG GGA CTGGTTAGGCGG CCAAGGCCTATCCAC Pcal_1264 1174390 - 1174800 + | dinitrogenase iron-molybdenum cofactor biosynthesis TERM 633 1175312 - 1175296 - g 75 -9.3 -3.82218 | AGGCATACGAGTAAA CGCCGTG GCC CCCGGCG GAATGGCCAAAGAAG fabG 1174784 - 1175479 + | 3-ketoacyl-(acyl-carrier-protein) reductase Pcal_1266 1176199 - 1176621 + | hypothetical protein TERM 634 1176842 - 1176864 + T 77 -2.7 -5.07486 | TCTTTAGTAGAGTTG TCGATGTGG TCTCT TTGCATCGA TTTTTCTTGGCGGTC Pcal_1267 1177487 - 1176822 - | metal dependent phosphohydrolase Pcal_1268 1178950 - 1177484 - | CRISPR-associated helicase Cas3 family protein protein TERM 635 1178960 - 1178938 - G 78 -8.4 -4.11371 | overlap 1178940 CAACAGCCCTCAAAA TAGCGCGTCT CAT ATACGCGCCA CCAGCCTAGACACTG Pcal_1269 1179828 - 1178947 - | hypothetical protein Pcal_1270 1180645 - 1179815 - | CRISPR-associated Cas5 family protein TERM 636 1180225 - 1180196 - G 72 -9.3 -3.63744 | overlap 1180194 CGGCTCCGCAAAATA CGTCTCCAGCCTA GTGG CAGGCTGAAGAAG AACTTGAACGGCCAT Pcal_1271 1181580 - 1180645 - | CRISPR-associated autoregulator Csa2 family protein Pcal_1272 1181875 - 1181582 - | hypothetical protein Pcal_1273 1182527 - 1181922 - | transcriptional regulator, TrmB Pcal_1274 1182606 - 1183454 + | CRISPR-associated RAMP Csa1 family protein Pcal_1275 1183435 - 1184319 + | CRISPR-associated Cas1 family protein Pcal_1276 1184310 - 1184585 + | CRISPR-associated Cas2 family protein TERM 637 1184894 - 1184875 - g 81 -11.4 -3.90318 | CCACTACCCCACAAA GCGCAGGC CGCC GCCTACGC CCTCGCCGCCCAAGC Pcal_1277 1184569 - 1185138 + | CRISPR-associated exonuclease Cas4 family protein TERM 638 1185200 - 1185210 + T 73 -4 -4.76312 | TTCTATCCCTCAACT TTCT GCC AGAA TTTTTACATATTGTA TERM 639 1185931 - 1185964 + T 74 -2.5 -5.0925 | gap 1, overlap 1185936 TAGTGGTTTGTTTGC CGCCTCTTTCAATTGT GGC ATAGTTGAAGGTG-CG TTTTTGATTTTCGGC Pcal_1278 1187024 - 1186215 - | CRISPR-associated Cas6 family protein Pcal_1279 1188047 - 1187796 - | hypothetical protein TERM 640 1189236 - 1189209 - R 100 -14.1 -4.07133 | opp_overlap 1189223 1189228 GATTCCCACAAACAA TGCCCGCGCGC CTAGGC GCGCGCGGGAA AGCGCCTTTCAATCC Pcal_1280 1192466 - 1191051 - | hypothetical protein Pcal_1281 1193322 - 1192516 - | CRISPR-associated protein APE2256 family TERM 641 1193350 - 1193340 - R 70 -4.6 -4.55016 | overlap 1193342 ATAAAAAAGTTAAAA GAGG TAG CCCC CACCCTGAGGTTCGC Pcal_1282 1194489 - 1193584 - | hypothetical protein TERM 642 1194058 - 1194070 + g 71 -10.5 -3.5525 | GATGGGCAGTAGGTC GGCCG CGT CGGCC TTTAGCCCCATCTCT Pcal_1283 1195328 - 1194486 - | hypothetical protein Pcal_1284 1197949 - 1195325 - | CRISPR-associated Cmr2 family protein TERM 643 1195888 - 1195868 - G 71 -11.1 -3.19653 | opp_overlap 1195858, overlap 1195859 CGAGAAGGCCAGCAA GTCGTCGCC CCC GGCGAAGAC CAGCTCTCCCTGGCT TERM 644 1197766 - 1197735 - G 80 -10.1 -4.09685 | gap 1, opp_overlap 1197741 1197743, overlap 1197737 GCCCACCGGTCAAAA GACGCGG-CGAGGC GGTCG GCCTCGGCCACGGC CGCGCTCTCTTCGCT TERM 645 1197764 - 1197737 - G 78 -11.3 -3.64716 | gap 1, opp_overlap 1197741 1197743, overlap 1197735 CCACCGGTCAAAAGA CGCGG-CGAGGC GGTCG GCCTCGGCCACG GCCGCGCTCTCTTCG TERM 646 1197835 - 1197854 + g 74 -2.7 -4.91109 | overlap 1197834 CGTCGAAGAGCTTCG CGGCCTC CTCTTC GTGGCTG TTTTTGTCGTAGACC Pcal_1285 1197982 - 1198902 + | CRISPR-associated RAMP Cmr4 family protein family protein TERM 647 1199308 - 1199295 - f 79 -4.5 -5.0133 | overlap 1199296 GACTGGGTCAAAAAA CTCGC CGAG GCGAA GTTCGAGCTTGTCAA Pcal_1286 1199326 - 1200375 + | CRISPR-associated RAMP Cmr1 family protein Pcal_1287 1200366 - 1201070 + | CRISPR-associated RAMP Cmr6 family protein Pcal_1288 1201095 - 1201919 + | hypothetical protein Pcal_1289 1201916 - 1202359 + | hypothetical protein Pcal_1290 1202353 - 1202898 + | hypothetical protein TERM 648 1203116 - 1203127 + F 72 -7.2 -4.1523 | TATTTCAGCTCTCCC CGCC GTAC GGCG TTTATATATCGTGGA TERM 649 1206155 - 1206165 + G 83 -8.2 -4.64844 | overlap 1206142 GAGGTGTCGCCGCTT CGGC GTG GCCG TTTTGTGTCTGTGCG Pcal_1291 1205999 - 1206442 + | hypothetical protein Pcal_1292 1207733 - 1206792 - | hypothetical protein TERM 650 1207593 - 1207604 + g 85 -3 -5.40873 | AATTTTTTGGCATAT TTCT ATGA AGAA TTTTATTTTTATATT Pcal_1293 1210846 - 1207967 - | hypothetical protein TERM 651 1208448 - 1208419 - G 80 -2.3 -5.26119 | TTTGTAAAAATAAAA TTACAGATAAC GGCATGTA GTTATCTACAA ATATCCATTCGCCAA TERM 652 1210138 - 1210150 + g 74 -2.7 -4.9218 | GGTCGCGTGCTCTGC CTTTT GTC AAGAG TTTTTCTAGTAGGTC TERM 653 1211206 - 1211217 + G 73 -3 -4.72272 | GCGAGGTGGCTTGGG GTTA GGTT TAAC TTTTTGCTGGAGGGG Pcal_1294 1210912 - 1211910 + | hypothetical protein Pcal_1295 1211907 - 1212473 + | hypothetical protein Pcal_1296 1214052 - 1212439 - | AAA ATPase Pcal_1297 1214734 - 1214234 - | hypothetical protein Pcal_1298 1216177 - 1215083 - | hypothetical protein TERM 654 1216322 - 1216346 + H 74 -2.1 -5.03994 | overlap 1216327 GGCGGGGAGGGGCGT CGTGTTGTACT TTT AGTACATTAAG TTTTTGTGTGTGGAC TERM 655 1217813 - 1217772 - g 93 -8.6 -4.79752 | gap 2, opp_overlap 1217775 GTCAAGAAGAGAAAA GCCGCGCCGGGTCCCACGCC CCCA GGCG-GGG-CCCAGGAAGGC GGCGGTTCATAAGAC Pcal_1299 1216356 - 1217825 + | hypothetical protein Pcal_1300 1217886 - 1218443 + | PaREP1 domain-containing protein Pcal_1301 1218498 - 1219160 + | hypothetical protein Pcal_1302 1220099 - 1219347 - | 5-formyltetrahydrofolate cyclo-ligase Pcal_1303 1220589 - 1221482 + | hypothetical protein Pcal_1304 1222528 - 1221713 - | hypothetical protein TERM 656 1222546 - 1222561 + r 71 -9 -3.5627 | TGGGGCGGCCGCCTG CTGGCT GGCG AGCCAG TTTAGCAACTCCTCT Pcal_1305 1222788 - 1222525 - | hypothetical protein TERM 657 1222666 - 1222680 + g 76 -2.8 -4.93296 | CTGCTTAATGTATGC GTGG GGGTCTG CCAC TTTTTCTACTCCTGG TERM 658 1222823 - 1222844 + H 75 -4.5 -4.75309 | overlap 1222817 1222825 TTTTAAATGTTGATT GTTCAAATA TTTA TATTTGACC TTTTATTAAATTTCA Pcal_1306 1223052 - 1223843 + | short chain enoyl-CoA hydratase Pcal_1307 1223935 - 1224876 + | alpha/beta hydrolase domain-containing protein Pcal_1308 1224963 - 1226186 + | acyl-CoA dehydrogenase domain-containing protein Pcal_1309 1226183 - 1227346 + | acetyl-CoA acetyltransferase Pcal_1310 1227343 - 1227798 + | hypothetical protein Pcal_1311 1227865 - 1228911 + | alcohol dehydrogenase fabG 1229372 - 1230109 + | 3-ketoacyl-(acyl-carrier-protein) reductase Pcal_1313 1231933 - 1230311 - | acyl-CoA dehydrogenase domain-containing protein TERM 659 1231285 - 1231274 - G 79 -7.2 -4.56597 | opp_overlap 1231276, overlap 1231275 1231276 CGCCGGGGCGAAAAA GGCG GCGA CGCC CTTGGCCCCCGGCCT Pcal_1314 1231962 - 1232636 + | methyltransferase type 11 Pcal_1315 1232614 - 1233150 + | hypothetical protein TERM 660 1234030 - 1234048 + F 75 -5.2 -4.72272 | AATAAAGTATAGCCC CGCATGAG TAC CTCGTCCG TTTTTCCTAACACAA Pcal_1316 1235017 - 1235661 + | TenA family transcription regulator Pcal_1317 1235697 - 1236341 + | hypothetical protein Pcal_1318 1236507 - 1236313 - | hypothetical protein Pcal_1319 1237631 - 1236693 - | ATPase TERM 661 1237659 - 1237627 - G 82 -10.7 -4.11216 | overlap 1237629 1237631 GGCGTAGGCCTAAAA TACATACCTCCCTAG TAA CTAGGGAGATATAAA GCTTCCATACACTAC TERM 662 1237657 - 1237629 - G 88 -13.3 -3.65542 | overlap 1237627 1237631 CGTAGGCCTAAAATA CATACCTCCCTAG TAA CTAGGGAGATATA AAGCTTCCATACACT TERM 663 1237655 - 1237631 - G 83 -13.7 -3.40622 | overlap 1237629 1237627 TAGGCCTAAAATACA TACCTCCCTAG TAA CTAGGGAGATA TAAAGCTTCCATACA Pcal_1321 1238024 - 1238398 + | hypothetical protein Pcal_1323 1238944 - 1240107 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pcal_1324 1240128 - 1240895 + | xanthine dehydrogenase accessory factor Pcal_1325 1242697 - 1240982 - | small GTP-binding protein TERM 664 1242184 - 1242157 - G 72 -6.2 -4.37092 | gap 1, overlap 1242159 ACGGCCTTGAGAAAA TAGCCC-CCGCCA GCC TCGCGGTGGGCTT AACCGACACCTCCTC TERM 665 1242182 - 1242159 - G 72 -8.8 -3.79419 | gap 1, overlap 1242157 GGCCTTGAGAAAATA GCCC-CCGCCA GCC TCGCGGTGGGC TTAACCGACACCTCC Pcal_1326 1242842 - 1244008 + | hypothetical protein Pcal_1327 1244018 - 1244875 + | SPFH domain-containing protein/band 7 family protein TERM 666 1245224 - 1245194 - g 71 -7.5 -4.19506 | gap 1, overlap 1245196 1245197 ACGCCAACGTGAAAA TACGCGCC-GCGAC CACC GCCGCCGGCGCAGA GCCCACACGCGTAGA TERM 667 1245222 - 1245196 - g 75 -10.1 -3.69618 | gap 1, overlap 1245194 1245197 GCCAACGTGAAAATA CGCGCC-GCGAC CACC GCCGCCGGCGCA GAGCCCACACGCGTA Pcal_1328 1244872 - 1245513 + | hypothetical protein TERM 668 1245658 - 1245673 + G 76 -3.2 -5.00846 | TCGGCCTTCTACATG TGGCAG TACG CTTCCA TTTTTGTGCTCTTTG Pcal_1329 1245514 - 1246035 + | hypothetical protein Pcal_1330 1246213 - 1248039 + | hypothetical protein Pcal_1331 1248063 - 1248815 + | ABC transporter related Pcal_1332 1248812 - 1249093 + | hypothetical protein TERM 669 1249278 - 1249298 + G 86 -14.7 -3.21593 | opp_overlap 1249238 1249266 1249267, overlap 1249276 TAATGCCCGCCGCGG CGCTGGCCG CCT TGGCCAGCG TGTTCTCAGCCGCTG Pcal_1333 1249136 - 1249585 + | hypothetical protein Pcal_1334 1250637 - 1249582 - | hypothetical protein TERM 670 1250180 - 1250166 - G 71 -7 -4.11216 | CCCCTATTGGCAAAA GGGCGG CGC CTGCCC CAATGGCGAAGGCCC Pcal_1335 1250692 - 1251984 + | amino acid permease-associated region TERM 671 1252002 - 1251977 - T 72 -10.4 -3.40878 | gap 1, overlap 1251975 ACTACGCCAAGAAGA GGCGCTAGGGC AGTAG GCCCC-GCGCC CTCCCCACCAACAGC Pcal_1336 1252496 - 1251981 - | NUDIX hydrolase TERM 672 1252932 - 1252910 - H 72 -7.6 -3.8969 | GCATTGAGACAACAA CGGCGCAGGA CCC TCACACGCCG GAGTACTACAAACAG Pcal_1337 1253039 - 1254046 + | hypothetical protein Pcal_1338 1255068 - 1254043 - | hypothetical protein Pcal_1339 1255623 - 1255141 - | signal-transduction protein Pcal_1340 1259198 - 1255776 - | hypothetical protein TERM 673 1256379 - 1256404 + g 82 -13.3 -3.29144 | overlap 1256380 CGTGTTTTGGCATGT CCCCTGGCACA CCAC TGTGCCAGGGC TTATGAAGGCGCTGA TERM 674 1256380 - 1256403 + g 85 -16.8 -2.57344 | overlap 1256379 GTGTTTTGGCATGTC CCCTGGCACA CCAC TGTGCCAGGG CTTATGAAGGCGCTG TERM 675 1257681 - 1257638 - G 81 -11.7 -3.75153 | gap 1, opp_overlap 1257650, overlap 1257639 TTGGCCCAAGCCAAA TCTCGTAGTAGCCGGGGGAG CCCCC CTCCCCCGTCTTC-ACGAGC CACGCCGGGGAGGGG TERM 676 1257680 - 1257639 - G 83 -15.2 -2.84878 | gap 1, opp_overlap 1257650, overlap 1257638 TGGCCCAAGCCAAAT CTCGTAGTAGCCGGGGGAG CCCCC CTCCCCCGTCTTC-ACGAG CCACGCCGGGGAGGG TERM 677 1257650 - 1257670 + g 77 -14 -3.01712 | opp_overlap 1257639 1257638 AAATCTCGTAGTAGC CGGGGGAG CCCCC CTCCCCCG TCTTCACGAGCCACG Pcal_1341 1259700 - 1259287 - | hypothetical protein Pcal_1342 1259800 - 1260234 + | hypothetical protein TERM 678 1260808 - 1260865 + G 84 -16.1 -2.58861 | gap 1, overlap 1260799 1260808 CAGCGTGGCTAAGTT CTCCGCCTCCGGGGGGCCCTGGGGAGGA GTC TCCGCCTCTGTGCCCCC-GAGGGAGGAG CTTGTGCCAGTCCTC Pcal_1343 1260266 - 1261036 + | type II secretion system protein Pcal_1344 1261033 - 1262508 + | type II secretion system protein E Pcal_1345 1262505 - 1263290 + | type II secretion system protein TERM 679 1263359 - 1263383 + G 100 -18.7 -4.431 | AATAAGTCTCATGTG CTTGACCAGGG AGA CCCTGGTCAAG TTTTATGGCTCGCTG Pcal_1346 1263354 - 1263635 + | hypothetical protein TERM 680 1263753 - 1263780 + G 75 -8.4 -4.07687 | gap 1, overlap 1263753 ATGGCAAAGTGTTTT G-GGTCTCGGCCT TTG AGGACGAGGCCAC TTTTAGGGCGAACAT TERM 681 1264305 - 1264280 - g 77 -10.3 -3.85698 | GGCGGTGTTTACAAA GGCGCCGCCAC GGCC GTGGTGGGGCC TGTGGGGTCTGGGAA Pcal_1347 1263626 - 1264747 + | AAA ATPase TERM 682 1264867 - 1264894 + F 90 -12 -3.96618 | opp_overlap 1264847 1264867 CTATTGCTTTTAAAA CCGTGGCCGCAT GTAG ATGTGGCAACGG TTGTTTACCCTTGGC TERM 683 1264894 - 1264867 - f 83 -9.8 -4.08216 | opp_overlap 1264867, overlap 1264847 CTATTGCTTTTAAAA CCGTGGCCGCAT GTAG ATGTGGCAACGG TTGTTTACCCTTGGC Pcal_1348 1264885 - 1265400 + | PaREP1 domain-containing protein Pcal_1349 1265571 - 1265858 + | Rieske (2Fe-2S) domain-containing protein Pcal_1350 1266885 - 1266034 - | ZIP family zinc transporter TERM 684 1266912 - 1266930 + r 72 -6.8 -4.18018 | opp_overlap 1266912 1266915 1266922 GTTTTCCATTTTAAA GTATTAAC ATT GTTAATGC TTTTAGGTAGAAGAG Pcal_1351 1267728 - 1267171 - | hypothetical protein TERM 685 1267402 - 1267420 + g 88 -13.8 -3.75153 | GTGGACGTGGGTTAT GGGGGTGC CCG GCGCCCCC TTTACCTTCGCCAAG Pcal_1352 1267829 - 1268284 + | hypothetical protein TERM 686 1268972 - 1268992 + T 74 -6.1 -4.50943 | opp_overlap 1268975 AGCTCGGGGGATTTA TAACCGCAA CAC TGGCGGTTG TTTTATCAGTTGTTG Pcal_1353 1269699 - 1269298 - | XRE family transcriptional regulator TERM 687 1269744 - 1269756 + H 76 -10.5 -3.40141 | GTTGGCGGGGGCTCC GGCGC CCA GCGCC TTAGTTAAGCTTTTA Pcal_1354 1269793 - 1270032 + | AbrB family transcriptional regulator Pcal_1355 1270206 - 1271474 + | extracellular solute-binding protein Pcal_1356 1271471 - 1272337 + | binding-protein-dependent transport systems inner membrane component Pcal_1357 1272334 - 1273197 + | binding-protein-dependent transport systems inner membrane component Pcal_1358 1273194 - 1274291 + | ABC transporter related Pcal_1359 1275477 - 1274269 - | glycosyl transferase, group 1 Pcal_1361 1276448 - 1277062 + | hypothetical protein TERM 688 1277461 - 1277484 + GT 77 -8.8 -4.0641 | gap 1 GCCCTGGTAGAGGCT GGCGAGACCTC GAA GAGGGC-CGCC TTTGTCTACGTGCCC TERM 689 1277946 - 1277964 + GT 72 -4.4 -4.67038 | opp_overlap 1277946, overlap 1277931 1277948 CGGCCTCATGACGAA GGCCACGG CGG CCGTTGAC TTTTCCTTTTACGAG Pcal_1363 1280473 - 1278218 - | alpha,alpha-trehalose-phosphate synthase (UDP-forming) Pcal_1362 1277059 - 1278276 + | glycosyl transferase, group 1 TERM 690 1279972 - 1279955 - Gf 70 -6.9 -4.07133 | overlap 1279952 1279956 TATGTGGAGAAAGAA GCCGACG GCCG CGTCGGG GGCCGCGTCGCGGAT TERM 691 1280758 - 1280737 - g 71 -11.5 -3.19449 | overlap 1280728 1280726 CAAATACGCCAGGAA GAGGGGGGC GGGG GACCCCCTC GCCGGCGCCAGCTTC Pcal_1364 1280498 - 1281043 + | methyltransferase type 11 Pcal_1365 1281065 - 1281319 + | hypothetical protein Pcal_1366 1281306 - 1281656 + | PilT domain-containing protein Pcal_1367 1282824 - 1281688 - | periplasmic solute binding protein TERM 692 1281855 - 1281878 + g 75 -5.3 -4.61868 | TAGCCACGCTGGTCT TAGCCGC TGTGAACTGT GCGGCTA TTTTCTCTATGACTC Pcal_1368 1284011 - 1282824 - | hypothetical protein Pcal_1369 1287121 - 1284041 - | molydopterin dinucleotide-binding region Pcal_1370 1287723 - 1287124 - | Rieske (2Fe-2S) domain-containing protein TERM 693 1287748 - 1287738 - R 88 -2.6 -5.47218 | TGTTACCCAAAAAAA TTAA CTT TTAA AAACTTTTCTCGAAA Pcal_1371 1288443 - 1287823 - | lysine exporter protein LysE/YggA TERM 694 1288021 - 1288011 - G 71 -8.2 -4.08394 | AGATTGCGGCGAAAA GGCC GGC GGCC CACTCGACGCCGAAT TERM 695 1288100 - 1288153 + g 80 -14.3 -2.71681 | GGGTTTACGAGGCCT AGGCTGAGGCCGAGGAGGTAGCCCC TCGC GGGGCTTCCCCCTCCGCTCCCGCCC TCCTTGGGCGGCTTA Pcal_1372 1289529 - 1288459 - | radical SAM domain-containing protein TERM 696 1289416 - 1289454 + g 71 -13 -2.57132 | opp_overlap 1289410 1289420, overlap 1289415 1289418 CGCGATGAACTTGAC CACATCCCCAGGCGACAC GGT GGGTCTCCAGGGGCTGTG CTTCTGAGAAAAAGA TERM 697 1290021 - 1290007 - g 78 -4.2 -5.0133 | GAGCTTGTGAAAAAA GACATC GAA GAGGTC GTGGCTCGGATAAGG Pcal_1373 1289581 - 1290057 + | PaREP1 domain-containing protein Pcal_1374 1291353 - 1290133 - | hypothetical protein Pcal_1375 1292251 - 1291370 - | ABC-3 protein TERM 698 1291991 - 1291966 - G 72 -4.7 -4.68103 | gap 1, overlap 1291967 1291969 CGAAGTTTAACAAAA CCATGGCCACTA GGG TAAAGGCCA-GG AAGAGCGGCGACGAG Pcal_1376 1292975 - 1292235 - | ABC transporter related Pcal_1377 1292982 - 1293824 + | initiation factor 2B related Pcal_1378 1293830 - 1294114 + | zinc finger SWIM domain-containing protein Pcal_1379 1294918 - 1294115 - | L-2-aminoadipate N-acetyltransferase Pcal_1380 1295032 - 1295232 + | hypothetical protein Pcal_1381 1295255 - 1295443 + | hypothetical protein Pcal_1382 1295479 - 1295700 + | hypothetical protein Pcal_1383 1295906 - 1295697 - | hypothetical protein Pcal_1384 1297012 - 1295903 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pcal_1386 1300579 - 1298699 - | AMP-dependent synthetase and ligase Pcal_1387 1301999 - 1300581 - | aldehyde dehydrogenase TERM 699 1302083 - 1302109 + H 72 -5.1 -4.46656 | opp_overlap 1302068 1302082 1302078, overlap 1302078 TCTAAAATTATAAAT GTTAGACAAGG AGGAG CCTGGCCTAAC TTTTACTGTTATAGG sdhA 1302196 - 1303938 + | succinate dehydrogenase flavoprotein subunit Pcal_1389 1303940 - 1304254 + | ferredoxin Pcal_1390 1304294 - 1305601 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pcal_1391 1306686 - 1305598 - | alcohol dehydrogenase Pcal_1392 1306815 - 1308194 + | phosphoenolpyruvate carboxylase Pcal_1393 1308224 - 1308634 + | signal transduction protein Pcal_1394 1308610 - 1309017 + | signal-transduction protein Pcal_1395 1309439 - 1309014 - | signal-transduction protein Pcal_1396 1310947 - 1309436 - | vinylacetyl-CoA Delta-isomerase TERM 700 1311032 - 1311008 - R 75 -5.1 -4.60073 | overlap 1311009 1311020 TAGATAATTATAAAA CTGTTTAAAAG ACC CCCTTAAACAA CTTGAGGGCGAACTC Pcal_1397 1311689 - 1311012 - | ABC transporter related Pcal_1398 1312402 - 1311674 - | tungstate/molybdate transport system permease protein TERM 701 1312294 - 1312243 - G 71 -11.4 -3.29461 | gap 1, overlap 1312285 CAAGGCCCGGCAGAA GAGAGCCGCC-CGCCGCAGCCGCCG AGG CCGCGGCCGTGAAGAGGAAGCTCTC CACAAACCCCGGCGG Pcal_1399 1313346 - 1312399 - | hypothetical protein TERM 702 1313524 - 1313511 - H 71 -2.5 -4.88405 | AACTTGTAAATAAAA TAAAT AAAA ATTTA AGTATAAGAGGTTTT Pcal_1400 1313854 - 1314213 + | hypothetical protein Pcal_1401 1315278 - 1314592 - | lipoate-protein ligase B TERM 703 1314712 - 1314729 + g 85 -11.3 -3.99324 | GAAGACTTCCTCGAA GGCCTCT ACGA AGAGGCC TTTGTACTCCTCCAG TERM 704 1315032 - 1315066 + g 71 -12.1 -2.90763 | GCCACCTCAGCTTCA CCACGGGGTAGGCCA CCAGC TGGCCTGGGCCGTGG TATGTGGCGTCTCCA Pcal_1402 1316606 - 1315275 - | dihydrolipoamide dehydrogenase TERM 705 1316404 - 1316424 + g 83 -8.2 -4.62069 | overlap 1316406 CAGTCGAACTCCACG CCGCCCCT CGCCC AGGGGCTG TTTTTGACCTCCCAA TERM 706 1316406 - 1316422 + g 75 -9.4 -3.92746 | overlap 1316404 GTCGAACTCCACGCC GCCCCT CGCCC AGGGGC TGTTTTTGACCTCCC Pcal_1403 1317778 - 1316603 - | branched-chain alpha-keto acid dehydrogenase subunit E2 Pcal_1404 1318763 - 1317771 - | transketolase, central region Pcal_1405 1319815 - 1318745 - | pyruvate dehydrogenase (acetyl-transferring) Pcal_1406 1320776 - 1319901 - | lipoyl synthase Pcal_1407 1321969 - 1320797 - | ABC-2 type transporter Pcal_1408 1322877 - 1321966 - | ABC transporter related TERM 707 1322796 - 1322744 - G 83 -14.7 -3.07088 | opp_overlap 1322727 ACCACCATAGACAGA GTGGTGGTCTTCCCAGCCCCGTTGG GCC CCATCAGAGCAGTGAAGCCCACCCC AGCGGAGAAAGAGAC TERM 708 1322918 - 1322936 + r 77 -10.2 -3.67597 | opp_overlap 1322917 1322916 TAGCGAGTTAAAAGG GGGCTACG GCT CGTCGCCC TTCTTCACTGGGACG Pcal_1409 1323778 - 1322921 - | thiosulfate sulfurtransferase Pcal_1410 1324113 - 1323877 - | hypothetical protein Pcal_1411 1324185 - 1324346 + | zinc finger CDGSH-type domain-containing protein Pcal_1412 1324657 - 1324343 - | transcriptional coactivator/pterin dehydratase TERM 709 1324613 - 1324643 + g 72 -4.8 -4.57073 | gap 3, overlap 1324639 1324641 GCCCACTGCGCCCCT GCCC-GCGA-GCTCT GACA AG-GCGTCGCTGGGC TTTTTACAGGCCATG Pcal_1413 1325204 - 1324689 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Pcal_1414 1325670 - 1325251 - | hypothetical protein TERM 710 1325285 - 1325323 + g 81 -11.1 -3.85817 | gap 1 TTACCGTACCAGGGG CTCCA-CTTGGCCCACCT TGGT ATGTGGGCAAAGGTGGAG TTTATGCCGAGGAAT Pcal_1415 1325984 - 1326310 + | HxlR family transcriptional regulator Pcal_1416 1326339 - 1326839 + | PaREP1 domain-containing protein Pcal_1417 1326812 - 1327198 + | hypothetical protein TERM 711 1327206 - 1327186 - f 77 -11.8 -3.22951 | overlap 1327184 TAGAGTCGTAGAAGA CGCCGCCA GTTAA CGGCGGCG TAGCACAAAGCGCGC Pcal_1418 1327885 - 1329744 + | hypothetical protein Pcal_1419 1330388 - 1330035 - | hypothetical protein Pcal_1420 1330740 - 1330423 - | hypothetical protein TERM 712 1330479 - 1330498 + g 70 -4.2 -4.67904 | TGAGTATCGCGACAG CAAGGGCG GCGG CTCTCTTG TTTTTCAGATTGGTC Pcal_1421 1331603 - 1330737 - | hypothetical protein TERM 713 1331132 - 1331148 + g 73 -11.5 -3.35597 | opp_overlap 1331129 1331130, overlap 1331130 CGGTGTACGAAACCT CCTCGCC TGT GGCGGGG TCTTTAAAGGCTCCG TERM 714 1331404 - 1331384 - G 71 -11.1 -3.24381 | opp_overlap 1331382 1331379, overlap 1331373 1331379 ATAAGACTAAGTTAA GTCTCGCCG CGC CGGCGAGAA AGTACTTTCTGCCGC Pcal_1422 1331732 - 1332502 + | 2-dehydro-3-deoxyglucarate aldolase Pcal_1423 1332832 - 1332485 - | hypothetical protein sat 1334190 - 1332829 - | sulfate adenylyltransferase TERM 715 1334489 - 1334467 - g 78 -6.2 -4.57837 | AGACGTGGTGAAAAA CCCCGAGG TCTGCCT CCTCGTGG ATCTCCGCCTCACCG Pcal_1425 1334267 - 1335355 + | AAA ATPase Pcal_1426 1335352 - 1336560 + | hypothetical protein TERM 716 1336621 - 1336605 - g 73 -12.3 -3.07013 | overlap 1336618 GAGCTCTCCAAGAGA GGCGTAG ACA CTACGCC GCTGGAAGCCGCCTG Pcal_1427 1336557 - 1337165 + | hypothetical protein Pcal_1428 1339078 - 1337195 - | adenylylsulfate reductase Pcal_1429 1339562 - 1339080 - | adenylylsulfate reductase, beta subunit Pcal_1430 1339657 - 1340559 + | hypothetical protein Pcal_1431 1341062 - 1340556 - | hypothetical protein TERM 717 1341012 - 1340999 - G 85 -3.1 -5.42259 | CCACGTCTAAAAAAA CCACA GGCC TGTAG TCCAAGATAGTGCGA Pcal_1432 1341123 - 1341623 + | phosphodiesterase Pcal_1433 1341864 - 1342526 + | hypothetical protein TERM 718 1342749 - 1342716 - g 82 -6 -4.74215 | overlap 1342707 1342717 AGATGAGGAAGAAAA TCCCCCTGGAAC AGTACAGGGA GGTCCAGAGGGA GGCCGCGGAGAGAAT Pcal_1434 1342547 - 1343137 + | adenylate kinase Pcal_1435 1343417 - 1343118 - | hypothetical protein Pcal_1436 1344181 - 1343417 - | respiratory nitrate reductase gamma subunit Pcal_1437 1344666 - 1344229 - | hypothetical protein TERM 719 1344320 - 1344346 + g 82 -10.1 -4.11216 | GGGTCCCTAAGCGCC GCCAGTAGGCC CATTA GGCCAATTGGC TTTTCCACCTCCGCA Pcal_1438 1345799 - 1344663 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pcal_1439 1347395 - 1345917 - | hypothetical protein Pcal_1440 1348320 - 1347673 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 720 1348131 - 1348147 + g 70 -12.3 -2.85712 | opp_overlap 1348130, overlap 1348129 CCTCAAGCAACCTAG CCACGAC CTC GTCGTGG TCCTTATGCCTATGC Pcal_1441 1349645 - 1348308 - | hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase TERM 721 1349229 - 1349201 - G 71 -8.1 -4.08216 | overlap 1349204 CCACGTTGGTCAAAA TAACCCCTGCG ATGTTCA CGCCGGGGTCA AAGGCCTTGAGCCCC TERM 722 1349226 - 1349204 - G 74 -7.6 -4.17048 | overlap 1349201 CGTTGGTCAAAATAA CCCCTGCG ATGTTCA CGCCGGGG TCAAAGGCCTTGAGC Pcal_1442 1349996 - 1349661 - | DsrC family protein TERM 723 1350262 - 1350250 - g 77 -2.7 -5.10526 | ATAGTAAAAAAGAAA GTCTT TGA AAAAC TAGACCCGCAGATTA Pcal_1443 1350097 - 1350447 + | DsrE family protein Pcal_1444 1350928 - 1350437 - | hypothetical protein Pcal_1445 1352075 - 1350918 - | sulfite reductase, dissimilatory-type beta subunit Pcal_1446 1353316 - 1352072 - | sulfite reductase, dissimilatory-type alpha subunit Pcal_1447 1353842 - 1353369 - | hypothetical protein TERM 724 1353501 - 1353485 - G 76 -7.3 -4.45083 | GGTATATGTACAAAA GCTCAAC GTC GTTAAGC GGCATATCGGGCCTG TERM 725 1353873 - 1353896 + H 74 -10.4 -3.53761 | gap 1, overlap 1353874 1353875 ACACTAATTATCTCT TA-TTCCGCCG ACG CGGCGGAAGTA TTTCCCCCACCCTTG TERM 726 1353874 - 1353894 + H 76 -11.1 -3.34517 | overlap 1353873 1353875 CACTAATTATCTCTT ATTCCGCCG ACG CGGCGGAAG TATTTCCCCCACCCT TERM 727 1353875 - 1353893 + H 90 -14.6 -2.60496 | overlap 1353874 1353873 ACTAATTATCTCTTA TTCCGCCG ACG CGGCGGAA GTATTTCCCCCACCC Pcal_1448 1353947 - 1354192 + | hypothetical protein Pcal_1449 1354877 - 1354167 - | hypothetical protein Pcal_1450 1355415 - 1354960 - | hypothetical protein Pcal_1451 1355650 - 1355423 - | SirA family protein Pcal_1452 1356126 - 1355698 - | hypothetical protein Pcal_1453 1357283 - 1356123 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 728 1356485 - 1356513 + g 78 -6.5 -4.57569 | opp_overlap 1356478 TTCTAAAGTCGCCGT TGGCGGGGTTGCG AGG CGCCGCCCACCCA TTTTTAGCCAAGTCA Pcal_1454 1357792 - 1357370 - | hypothetical protein TERM 729 1357433 - 1357415 - G 73 -12.4 -3.14132 | TGCCCTCTCGAGGAA GGTGGCGG CGC CCACCACC TCGTCCACGAAATCG Pcal_1455 1358322 - 1357822 - | hypothetical protein Pcal_1456 1359419 - 1358319 - | sulfite reductase, dissimilatory-type beta subunit Pcal_1457 1360654 - 1359416 - | hydrogensulfite reductase TERM 730 1360651 - 1360666 + g 100 -9 -4.88405 | TTTTCTCAACAGTTT CCATGG TAAC CCATGG TTTTGTTTAAAAATT Pcal_1458 1360737 - 1361546 + | uroporphyrinogen III synthase HEM4 Pcal_1459 1362948 - 1361554 - | mercuric reductase TERM 731 1361721 - 1361745 + g 75 -10.7 -3.63744 | gap 1, overlap 1361721 1361720 TCAGCTCCTCTGCCT G-CGGCGCGG CGGCCA CCGCGCCGGC TATTTTCCCGCCGCG TERM 732 1362006 - 1362025 + g 72 -5.6 -4.46155 | gap 1 TTATGGCCGCCACCA CGCC-CTGC CTC GCCGCGGCG TTTTCTAGATATCTC Pcal_1460 1363329 - 1362952 - | hypothetical protein Pcal_1461 1364049 - 1363342 - | uroporphyrinogen-III synthase (HemD) TERM 733 1363472 - 1363507 + g 75 -11.8 -3.29144 | gap 1 GCCACGTTTACGGCG CGCCT-CAGCCTCTCCG CCA CGGGGAGGCCGTAGGGG TTCTCCACGGCGTAC TERM 734 1363907 - 1363896 - G 74 -2.2 -4.96848 | overlap 1363897 1363899 CCCCCGAGACAAAAA CCAC GTGG GTAG CCCCCGCCAAGGCCT Pcal_1462 1364756 - 1364169 - | hypothetical protein TERM 735 1365017 - 1364974 - g 72 -8.9 -3.91897 | gap 2 TGGGCTAGTCAGAAA CGCCGCTGGGAAGGCCTTCCA GGCG TGGAAGTCCCTCCT-G-GGCG CACTGCTGGTCGATA TERM 736 1365166 - 1365145 - g 73 -2.9 -4.8048 | gap 1, overlap 1365146 TTCCCAGATGAAAAA GCTCGCCCAA CTC CTCGGCG-GC GAGGAAAGCGCCTTG Pcal_1463 1364798 - 1365340 + | PaREP1 domain-containing protein Pcal_1464 1365773 - 1365552 - | hypothetical protein Pcal_1465 1367473 - 1365770 - | acylphosphatase TERM 737 1366718 - 1366685 - G 75 -12.3 -3.29461 | CAACTCTCTGTAGAA GGTGGGGGGCTCCCT GTCC AGGTAGCCCCACGCC GTGGCGCCCAGGAGG Pcal_1466 1367715 - 1367470 - | SirA family protein Pcal_1468 1368127 - 1368432 + | Rieske (2Fe-2S) domain-containing protein Pcal_1469 1368516 - 1369412 + | pirin domain-containing protein Pcal_1470 1369409 - 1370215 + | hypothetical protein Pcal_1471 1370252 - 1371436 + | hypothetical protein TERM 738 1371483 - 1371514 + G 75 -8.7 -4.07687 | overlap 1371484 GGCGGCGCGGCGGCC TTTGCCCACTTGG CCTCGC CCAAGTGGGCGGC TTTTGCGGGAGGGGT TERM 739 1371484 - 1371513 + G 73 -12.2 -3.04398 | overlap 1371483 GCGGCGCGGCGGCCT TTGCCCACTTGG CCTCGC CCAAGTGGGCGG CTTTTGCGGGAGGGG TERM 740 1371711 - 1371683 - g 72 -5.2 -4.4634 | gap 1, overlap 1371685 AATCGCAACAATAAA GTGGG-GGGAGAG GCAC CTCTACCTCCCTC TGGCCCTCTCAGCGG Pcal_1472 1371420 - 1372178 + | hypothetical protein TERM 741 1372928 - 1372918 - g 71 -6.8 -4.18506 | opp_overlap 1372927, overlap 1372919 GGATGGGGAAAACAA GGTG GTG CACC TCTCCACTGGGGAGA Pcal_1473 1372175 - 1373374 + | flavoprotein reductase Pcal_1474 1373731 - 1373360 - | hypothetical protein Pcal_1475 1373979 - 1373731 - | SirA family protein Pcal_1476 1374187 - 1375209 + | hypothetical protein Pcal_1477 1375212 - 1376558 + | hypothetical protein Pcal_1478 1376561 - 1377805 + | putative inner membrane protein Pcal_1479 1377858 - 1378238 + | signal-transduction protein Pcal_1480 1378807 - 1378235 - | hypothetical protein Pcal_1481 1379946 - 1378804 - | glutamyl-tRNA reductase Pcal_1482 1381043 - 1379937 - | cytochrome c biogenesis protein, transmembrane region TERM 742 1380215 - 1380195 - G 70 -4.6 -4.52857 | AGCGCCTAGAGAAAA GCCGAAGA GGAAG TCGCCGGC AGAGCCAAGCCGCTT TERM 743 1380522 - 1380501 - G 70 -5.1 -4.43501 | gap 1, overlap 1380502 AACGCAGGGAGAAAA CGCGCT-GGC GAC GCCTAGCACA AACGCAGACAGCAAA Pcal_1483 1381534 - 1381040 - | hypothetical protein TERM 744 1381256 - 1381241 - G 100 -11.8 -4.43576 | overlap 1381243 AGTAGACATAAGAAA CGCCGC CGCG GCGGCG AGTGGGGCGAGGGAG Pcal_1484 1382138 - 1381563 - | ABC transporter related Pcal_1485 1382579 - 1382205 - | hypothetical protein Pcal_1486 1383535 - 1382576 - | cytochrome c assembly protein TERM 745 1382617 - 1382607 - G 76 -6.8 -4.51378 | AGCCAGAGTATAAAA GCCA TTG TGGC GAAGTAAAGCGCGGC Pcal_1487 1384712 - 1383570 - | hypothetical protein Pcal_1488 1387548 - 1384969 - | cytochrome c assembly protein TERM 746 1386418 - 1386382 - G 90 -17.9 -2.87344 | overlap 1386365 GACCGCCCCCACATA GGCGGCCGCGGCCAAGG CGC CGCTGGCCACGGCCCCC ACGGCGACGTAGAGG TERM 747 1387467 - 1387439 - G 75 -12.3 -3.30701 | overlap 1387434 1387441 GCGTAGTAAAGCCAA GAGGCGGCCAACA ACG CGGTGGCCGCCGC CAGCAAGCGGACTCT TERM 748 1387465 - 1387441 - G 82 -13.5 -3.21807 | overlap 1387439 1387434 GTAGTAAAGCCAAGA GGCGGCCAACA ACG CGGTGGCCGCC GCCAGCAAGCGGACT Pcal_1489 1388883 - 1387567 - | hypothetical protein TERM 749 1388290 - 1388260 - G 71 -12.4 -2.87564 | overlap 1388236 CGAGGCGGCCAGAGA GGCCACTGCCACGG AGG CCGCGGCGAGGGCC AACAAGTACCTCCCC TERM 750 1388846 - 1388835 - G 70 -3.6 -4.57341 | overlap 1388823 1388822 AACCCCTGGCAAAAA CCGC CAAG GCGA GAGAGAAAAGAGCTA Pcal_1490 1390068 - 1388911 - | hypothetical protein TERM 751 1390103 - 1390117 + r 100 -3.6 -5.9667 | GGTATTTAAACTTTT GTATTT GTC AAGTAC TTTTTTTATGTTTTT Pcal_1491 1391918 - 1390110 - | TPR repeat-containing protein TERM 752 1390135 - 1390145 + g 70 -4 -4.62471 | overlap 1390133 TTTTTATGTTTTTTG TACA CTC TGTA TTTTGTGTGTACATT TERM 753 1391181 - 1391192 + g 75 -5.8 -4.62783 | opp_overlap 1391181 GGTCTTGTTTACAAA GAGG AGGG CCTC TTTTTCAACTGCGTC Pcal_1492 1392607 - 1391903 - | hypothetical protein TERM 754 1392529 - 1392518 - G 74 -7.2 -4.26019 | overlap 1392509 CAAGTACAGCCAAAA GCCG ACTC CGGC GACCACCGCCGCGGC Pcal_1493 1394255 - 1392600 - | hypothetical protein TERM 755 1393084 - 1393101 + g 76 -4.8 -4.8667 | ATGGAGTAGTAGTGG GGCACC ACTAGG GGTGTC TTTTTCTCCAGTGTA TERM 756 1393125 - 1393154 + g 78 -2.9 -5.08824 | gap 1 CAGTGTAATGGGCTG GGCG-GGTAC TTGGGGCAGTT GTACCACGCC TTTTTTAACTACGCC Pcal_1494 1395253 - 1394276 - | respiratory nitrite reductase specific menaquinol--cytochrome-c reductase complex subunit NrfD Pcal_1495 1395837 - 1395253 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 757 1395455 - 1395468 + g 70 -4.5 -4.55697 | CACCAAGTGCACTTG GAGGG CGTG CCTTC TTTATTTATCCACCT Pcal_1496 1396726 - 1395932 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 758 1396007 - 1396022 + g 71 -11.8 -2.91912 | GGCCATGATCGCCAC GGCGGC TGCG GCCGCC TCTATGCCTAAGTAG TERM 759 1396726 - 1396744 + r 75 -6.8 -4.42464 | GAGTCAGTTTGACCA CGTAAAAG CTT CTTTTATG TTTATTTAAACCATT Pcal_1497 1397473 - 1396796 - | hypothetical protein Pcal_1498 1398416 - 1397544 - | polysulphide reductase, NrfD TERM 760 1397977 - 1397961 - G 85 -11.5 -4.07568 | CGCCGTGTTCCAAAA CGGCACC CCC GGCGCCG CGGCGATTAAGAACC Pcal_1499 1398976 - 1398413 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 761 1398570 - 1398584 + g 87 -12.8 -3.889 | ACCTCTACGCAGACC GGCCGG AGG CCGGCC TTTACTCTGCTTAAA Pcal_1500 1401543 - 1398973 - | molybdopterin oxidoreductase TERM 762 1400146 - 1400161 + g 75 -10.4 -3.71527 | CACCACTTTCCCCGC CGCGGT GGTA ACCGCG TTTGGGTACTTGGCG TERM 763 1400649 - 1400629 - G 78 -6.7 -4.57569 | opp_overlap 1400628 1400629 GTACTTCTTTAAAAA CGCGGCGTC GTA GAGGCCCCG GGTTATTATCACGTT TERM 764 1401606 - 1401632 + G 93 -5.8 -5.60993 | gap 1, opp_overlap 1401590 GCCCGCGAGGACTTA CGCGCGGGGAG GTACGA CTCCGCG-GCG TTTTTTTGTGCAACA Pcal_1501 1401589 - 1401921 + | HEPN domain-containing protein Pcal_1502 1401926 - 1402570 + | DNA polymerase beta subunit Pcal_1503 1403780 - 1402872 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase panB 1403827 - 1404624 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Pcal_1505 1404651 - 1405145 + | PaREP1 domain-containing protein Pcal_1506 1405946 - 1405116 - | molybdopterin oxidoreductase, membrane subunit Pcal_1507 1406632 - 1405943 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 765 1406060 - 1406020 - G 71 -11.1 -3.28712 | opp_overlap 1406019 1406020 1406025 TGCCGCTTCTCACAA GCTCGGCAACTGGGTCG CTTGGGT CGTCCAAGTCGCCGAAC ATTCTAGACTTGGTG Pcal_1508 1409805 - 1406629 - | molybdopterin oxidoreductase TERM 766 1406848 - 1406878 + g 80 -10.4 -3.95584 | gap 1 CCTCACCTTGAACCT GGCCGTGGG-GAC GTTTTG GGCGCCCACGGCC TTTAATTGCTCAAGG Pcal_1509 1410334 - 1409897 - | hypothetical protein Pcal_1510 1410931 - 1410365 - | hypothetical protein TERM 767 1410461 - 1410475 + g 70 -4.2 -4.56597 | overlap 1410463 TTCTGCGAATGTGGC TAGGCA TTT TGCCGA TTTTTCGCCGGGGGC TERM 768 1410820 - 1410799 - G 70 -2.1 -4.78107 | gap 1, overlap 1410800 TACCACGACGAAAAA GCTCCACAGC CAA GCGGAGG-GC GTCTGAGGAAAACCT Pcal_1511 1411385 - 1410954 - | hypothetical protein Pcal_1512 1411565 - 1412197 + | metallophosphoesterase TERM 769 1412758 - 1412748 - g 70 -4.6 -4.41348 | opp_overlap 1412753 CTTTGTGCAAATAAA CGCG GGT CACG GCTGGCTGTTCAGCC Pcal_1513 1412239 - 1414137 + | NADH:flavin oxidoreductase/NADH oxidase Pcal_1514 1415138 - 1414134 - | hypothetical protein Pcal_1515 1416482 - 1415325 - | peptidase M16 domain-containing protein TERM 770 1416390 - 1416349 - G 78 -8.6 -4.15222 | AGGTGCTCCAACAAA TGCGTCACCCCCCGCGCC TCCCGC GGCTCGAAGAGCGACCCA ACCCCCACCGACGTC Pcal_1516 1417103 - 1416516 - | hypothetical protein Pcal_1517 1417795 - 1417142 - | ABC transporter related Pcal_1518 1418699 - 1417779 - | transport system permease protein TERM 771 1418058 - 1418004 - G 86 -11.8 -3.97602 | opp_overlap 1418024 1418028 CAAGAGACCGATAAA CCCCACAGGCCCCACCGTAGCCGTCG CAA CGCCCGCCGCCGCGGCGCCTGCGGCG GCGATGAGGAGGTTT TERM 772 1418024 - 1418070 + g 77 -7.8 -4.27117 | gap 1, opp_overlap 1418004, overlap 1418028 CAGGCCCCACCGTAG CCGTCGCAACGCCCGCCGCCG CGGCGC CTGCGGCGG-CGATGAGGAGG TTTGTCTTCTCCACG Pcal_1519 1420003 - 1418696 - | periplasmic binding protein TERM 773 1418810 - 1418849 + g 72 -9.2 -3.64703 | gap 1, opp_overlap 1418810, overlap 1418810 GGCGAGTTGGTAGAA GG-CGTCGCTGTAGGCGTA TAA TCTGCCCACTGCGACGGCC TTTAGCTCGGAGAGC TERM 774 1421651 - 1421666 + G 73 -11.8 -3.14344 | GGACCCCCTAGAGGC GGCGGC GGTT GCCGCC TTCGTCAACGGCCTC Pcal_1520 1420284 - 1421789 + | carbohydrate kinase, YjeF related protein Pcal_1521 1422571 - 1421786 - | precorrin-4 C11-methyltransferase Pcal_1522 1423185 - 1422556 - | cobalt-precorrin-2 C(20)-methyltransferase cbiT 1423765 - 1423178 - | cobalt-precorrin-6Y C(15)-methyltransferase cbiD 1424772 - 1423762 - | cobalt-precorrin-6A synthase TERM 775 1424729 - 1424701 - G 71 -10.2 -3.59979 | gap 1, opp_overlap 1424706 1424708 1424727, overlap 1424704 CTCCCCCAGCGCAAA CAGC-GCGGCGGC CTTG GCCGCAGCAGCCG CCGCGAGGCCGGTGG Pcal_1525 1425506 - 1424769 - | precorrin-3B C17-methyltransferase Pcal_1526 1426467 - 1425496 - | precorrin-8X methylmutase Pcal_1527 1427051 - 1426455 - | hypothetical protein TERM 776 1426834 - 1426814 - G 83 -11.8 -3.90097 | overlap 1426800 1426809 AGGCCACAAACATAA GCGCGGCC GTCTT GGCCACGC CGTGGCGCATGGACA Pcal_1528 1427336 - 1427971 + | cobalt-precorrin-6Y C(5)-methyltransferase TERM 777 1428693 - 1428665 - g 72 -8.8 -3.85698 | CGTTGCGTCGATAAA GCCTCTCGTCTA TCAAG TGGCCGAGAGGC TGGGAACGAGGCCCA TERM 778 1428816 - 1428836 + G 100 -13.9 -4.8048 | opp_overlap 1428794 GAAGCATCTGCGCTA GCCGCGGCG GGC CCCCGCGGC TTTTTGCTCTACAGA Pcal_1529 1427961 - 1428902 + | cobalamin biosynthesis protein CbiG Pcal_1530 1429866 - 1429681 - | hypothetical protein Pcal_1531 1430063 - 1429887 - | hypothetical protein Pcal_1532 1430220 - 1430068 - | hypothetical protein Pcal_1533 1431255 - 1430242 - | hypothetical protein TERM 779 1431208 - 1431196 - GR 71 -10.5 -2.92777 | overlap 1431195 GGGGAGAGAGGAAAT GGCGC GGT GCGCC TCGCCGAGTTCCACC Pcal_1534 1432238 - 1431228 - | hypothetical protein Pcal_1535 1432932 - 1432279 - | cobalamin-5'-phosphate synthase Pcal_1536 1433840 - 1432920 - | aminotransferase TERM 780 1433400 - 1433372 - G 76 -12.4 -3.40522 | ACTCGTCCACGAGAA GCGCCGCCCC TCTCGCCTT GAGGCGGCGC GCCAAGTCGAGCACC Pcal_1537 1434761 - 1433937 - | asparagine synthase TERM 781 1434168 - 1434192 + g 87 -7.1 -4.96848 | overlap 1434160 1434159 1434167 GATTAGCGGCGCCAC GCCCTTTAGGG CCT CTCTAAGCGGC TTTTTGTCTAAGACC Pcal_1538 1435366 - 1434758 - | protein of unknown function DUF71, ATP-binding region TERM 782 1435021 - 1434986 - G 78 -9 -4.21194 | opp_overlap 1434989, overlap 1434989 GCCGATGATGTAAAA GGAGAGCTCCTCCG CCTCCCTC CTGAGGAGCTCTTC GTGGTCCATCCCCCA Pcal_1539 1436310 - 1435363 - | cobalamin biosynthesis protein Pcal_1540 1436764 - 1436300 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 783 1436922 - 1436937 + H 74 -6 -4.56597 | overlap 1436923 TACGGGCCTGAGGGC TGCGGG AAGT CCCGCC TTTTTCGAGAGGCCG TERM 784 1437101 - 1437112 + H 75 -7.2 -4.39426 | GCTTCGCAACAAGTC GGGG CTGG CCCC TTTTCTGCGCCTCTG TERM 785 1438187 - 1438173 - g 81 -12.8 -3.56325 | CGTGGATAAGTACAA GCGGCG GCT CGCCGC GCTTAAGGGCTTGGA Pcal_1542 1437328 - 1438491 + | hypothetical protein Pcal_1543 1440270 - 1438522 - | Cl- channel, voltage-gated family protein Pcal_1544 1440385 - 1440888 + | PaREP1 domain-containing protein Pcal_1545 1441776 - 1440934 - | paREP1 TERM 786 1441628 - 1441644 + g 73 -12.3 -3.14132 | CCGGGGTGCCCCCTG GTGGTGG CCA CCACCAC TTCGTCGAAGCCAGC Pcal_1546 1442678 - 1441773 - | hypothetical protein Pcal_1547 1443468 - 1442728 - | hypothetical protein Pcal_1548 1444175 - 1443516 - | hypothetical protein Pcal_1549 1444828 - 1444178 - | RNA 2'-phosphotransferase-like protein TERM 787 1445218 - 1445165 - g 83 -13.8 -3.59979 | gap 2, opp_overlap 1445169 1445206, overlap 1445141 1445201 1445202 CGTCCTCACGGCAAA CCTCCCGCCG-CGGGGCCCCGT-GGA GGTG TCCTACAAGGCCGCGACGGAGGGCGG CGTCCTCTACGTGGT Pcal_1550 1444869 - 1445645 + | hypothetical protein Pcal_1551 1446546 - 1445611 - | hypothetical protein TERM 788 1446901 - 1446873 - g 81 -13.1 -3.54424 | GTTTATGCGGTTAAA CTGCCCAACGCCA GCG TGGAGCCGGGCAG AGTCCTCGCGGGCAG Pcal_1552 1446600 - 1447007 + | hypothetical protein Pcal_1553 1447206 - 1447667 + | hypothetical protein Pcal_1554 1448146 - 1447931 - | ribosomal protein L24 Pcal_1555 1448915 - 1448130 - | ribulose-1,5-biphosphate synthetase Pcal_1556 1449626 - 1449090 - | GCN5-related N-acetyltransferase Pcal_1557 1450425 - 1449613 - | aldo/keto reductase TERM 789 1450206 - 1450194 - G 70 -4.7 -4.50058 | TAGTCACAATGAAAA CCTCG TCC CGGGG AAAGCCCCTAACCGC TERM 790 1451273 - 1451285 + G 85 -3.3 -5.41143 | CGTTGCAAAATAGGC CTCGC ATA GCAAG TTTTTTTGCGGGATG Pcal_1558 1450888 - 1451496 + | cobalamin (vitamin B12) biosynthesis CbiM protein Pcal_1559 1451493 - 1451777 + | cobalamin biosynthesis protein Pcal_1560 1451899 - 1452405 + | hypothetical protein Pcal_1561 1452390 - 1453001 + | ABC transporter related TERM 791 1454150 - 1454140 - g 74 -2.4 -4.87665 | GTGGACGTATAAAAA TGCC ACA GGCC AGTCCTTTGTCTACG Pcal_1562 1452998 - 1454704 + | AMP-dependent synthetase and ligase Pcal_1563 1455090 - 1454698 - | CopG family transcriptional regulator Pcal_1564 1457347 - 1455110 - | (NiFe) hydrogenase maturation protein HypF Pcal_1565 1457404 - 1457751 + | hypothetical protein Pcal_1566 1457867 - 1459051 + | hydrogenase formation HypD protein Pcal_1567 1459048 - 1459551 + | hypothetical protein Pcal_1568 1459539 - 1460558 + | hydrogenase expression/formation protein HypE Pcal_1569 1460589 - 1460993 + | hypothetical protein Pcal_1570 1460990 - 1461715 + | hypothetical protein Pcal_1571 1461708 - 1462016 + | hypothetical protein Pcal_1572 1462013 - 1462474 + | hypothetical protein Pcal_1573 1462461 - 1462733 + | hypothetical protein Pcal_1574 1462784 - 1463047 + | hypothetical protein Pcal_1575 1463083 - 1464411 + | nickel-dependent hydrogenase small subunit Pcal_1576 1464408 - 1465181 + | hypothetical protein Pcal_1577 1465178 - 1466461 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pcal_1578 1466505 - 1468421 + | nickel-dependent hydrogenase, large subunit Pcal_1579 1468400 - 1468909 + | hydrogenase maturation protease TERM 792 1469276 - 1469241 - g 71 -8.2 -4.08945 | gap 1, opp_overlap 1469252 ACGAGGTTGCCAAAA GCGGGTACAGAGAGGGC GTG GCCTACTTTG-ACCCGC TTCCAGGGGGCTATG Pcal_1580 1469138 - 1469719 + | hypothetical protein Pcal_1581 1470715 - 1471752 + | alcohol dehydrogenase Pcal_1582 1472186 - 1471749 - | PaREP1/PaREP8 domain-contain protein TERM 793 1473263 - 1473287 + G 72 -9.1 -3.82098 | opp_overlap 1473259 CCGCCTAAGAAGGCG CCGCCAGCCGC AGA GCCGCAGGTGG TTTGGGTTAGTTCTC rpl3p 1472297 - 1473313 + | 50S ribosomal protein L3P rpl4lp 1473325 - 1474182 + | 50S ribosomal protein L4P Pcal_1585 1474179 - 1474424 + | 50S ribosomal protein L23P Pcal_1586 1474860 - 1474498 - | hypothetical protein Pcal_1587 1475421 - 1474888 - | hypothetical protein TERM 794 1476031 - 1476017 - g 71 -7.1 -4.18934 | overlap 1475990 TATCAGCCTAAGAAA GCCTC TGGAG GAGGC TAGAGAGGCAATTTT Pcal_1588 1475475 - 1476074 + | hypothetical protein Pcal_1589 1476071 - 1476340 + | DNA-directed RNA polymerase, subunit L Pcal_1590 1476337 - 1477002 + | ribosome biogenesis protein Pcal_1591 1477008 - 1477772 + | hypothetical protein Pcal_1592 1477808 - 1478638 + | hypothetical protein TERM 795 1478626 - 1478659 + F 85 -8.2 -4.45738 | gap 1, opp_overlap 1478631 1478634, overlap 1478631 1478634 AAGGGCGGAGCCTGC CACAAGGAGGTAGGC CTAAA GCCTACCTTC-TGAG TTTCTTGTTGGCCTC TERM 796 1478631 - 1478655 + F 77 -12.2 -2.8071 | opp_overlap 1478631 1478634, overlap 1478626 1478634 CGGAGCCTGCCACAA GGAGGTAGGC CTAAA GCCTACCTTC TGAGTTTCTTGTTGG TERM 797 1478655 - 1478631 - f 76 -10.7 -3.29511 | opp_overlap 1478631 1478626 1478634, overlap 1478634 CGGAGCCTGCCACAA GGAGGTAGGCC TAA AGCCTACCTTC TGAGTTTCTTGTTGG TERM 798 1478652 - 1478634 - f 70 -11 -2.82742 | opp_overlap 1478631 1478626 1478634, overlap 1478631 AGCCTGCCACAAGGA GGTAGGCC TAA AGCCTACC TTCTGAGTTTCTTGT TERM 799 1478634 - 1478652 + F 74 -10.3 -3.52836 | opp_overlap 1478634 1478631, overlap 1478631 1478626 AGCCTGCCACAAGGA GGTAGGC CTAAA GCCTACC TTCTGAGTTTCTTGT TERM 800 1478786 - 1478769 - g 70 -2.5 -4.8667 | overlap 1478770 1478771 TATATTCTATAAAAA GCTGGGG AAGG CCCCGTC GCCGGGGGACGTGGT Pcal_1593 1478734 - 1479975 + | 3-isopropylmalate dehydratase large subunit TERM 801 1479992 - 1480002 + F 72 -8.2 -3.83102 | overlap 1479984 ACTGCACGTCTTCCG CGCC GAA GGCG TTTACTGCTACTTTG TERM 802 1480167 - 1480157 - f 86 -6.8 -4.96996 | GCGAAATAAAACAAA GACG GCA CGTC TACATCGGACTCACC TERM 803 1481151 - 1481162 + G 84 -7.2 -4.72846 | overlap 1481152 AGAATAGGATGCACA CGGC AAAA GCCG TTTTTGCATATCTGC Pcal_1594 1480268 - 1481194 + | ornithine carbamoyltransferase Pcal_1595 1482537 - 1481191 - | 2-isopropylmalate synthase TERM 804 1483458 - 1483482 + G 76 -12.8 -3.14344 | TAGGGGCTACATCGA GCGGAGGGCC GAGGA GGCCATCCGC TTCATAAGAGAGGTG Pcal_1596 1482829 - 1484613 + | hypothetical protein Pcal_1597 1484642 - 1485052 + | hypothetical protein Pcal_1598 1485045 - 1485599 + | hypothetical protein Pcal_1599 1485658 - 1486305 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pcal_1600 1486302 - 1487435 + | hypothetical protein TERM 805 1489031 - 1489060 + F 83 -12.1 -3.28712 | opp_overlap 1489020 1489029 AAATGGCTAAGGACT TCGCCGATGCTGC ACCA GCGGCGTCGACGA TTGTCCACAGAGGCG TERM 806 1491405 - 1491434 + G 70 -3.6 -4.63527 | TTTCTGCCAGCGTTG TAGGCGCC-AGCTC CTCC GCGCTAGGC-CCTA TTTTTGAGGTACTGC Pcal_1602 1490971 - 1491441 + | archaemetzincin-like protein leuD 1491910 - 1491425 - | 3-isopropylmalate dehydratase small subunit Pcal_1604 1491999 - 1493135 + | trans-homoaconitate synthase Pcal_1605 1493125 - 1494102 + | 3-isopropylmalate dehydrogenase TERM 807 1494825 - 1494804 - g 100 -12.9 -4.74453 | opp_overlap 1494808 GAATAGAGGGAAAAA CCGTCGCCG TCCA CGGCGCCGG GAATACGGGGGCTTG Pcal_1606 1494167 - 1495432 + | glutamate dehydrogenase (NADP) TERM 808 1496485 - 1496507 + G 82 -10.5 -4.16016 | ATGTTTATCCGCAGT CCCCGCTGC CTCCC GCAGAGGGG TTTATTGACGCGTCG TERM 809 1496781 - 1496747 - g 86 -14.2 -3.17763 | opp_overlap 1496739 1496750 TGGAGATGCCATGAA CGGCGGCGTGGCTGTA ATA TACGGCAACGCCGGCG ACACCTTGGGACAGG Pcal_1607 1495611 - 1497329 + | glutamate synthase (NADPH) GltB1 subunit / glutamate synthase (NADPH) GltB3 subunit TERM 810 1499283 - 1499272 - g 75 -5.8 -4.65895 | TTGTCCATTGAAAAA GAGC TGAA GCTC GCCATGGGCGCAGGT Pcal_1608 1497319 - 1499400 + | glutamate synthase (NADPH) GltB2 subunit TERM 811 1500191 - 1500173 - g 88 -16 -3.09289 | TACGAGGTGAATATA CCAGCGGG CGA CCCGCTGG AGGTGGCTGACAAGG Pcal_1609 1499606 - 1500898 + | L-glutamine synthetase Pcal_1610 1500898 - 1501569 + | glutamine amidotransferase-like protein Pcal_1611 1501658 - 1502767 + | asparagine synthetase A TERM 812 1502778 - 1502798 + T 70 -5.3 -4.42806 | CATAGACTAGTTTGT GGCGCGAAA ATT TCTAGCGCC TTTCTTTCACAATAC Pcal_1612 1503972 - 1502815 - | Serine--glyoxylate transaminase TERM 813 1503373 - 1503385 + gT 81 -9.1 -4.07568 | CGTCAGCCCAGGCGG GGCGT TCA ACGCC TTTTGAGAACCGCCG Pcal_1613 1504831 - 1503947 - | hypothetical protein TERM 814 1504037 - 1504000 - GR 76 -3.3 -4.95155 | gap 1, opp_overlap 1504006, overlap 1504003 1504004 CCGAGAGTATAAAAA CTACCAGGGCG-AGGC CCAGCAT GCCTACGCCGAGGAAG GCCAGCGCCACGCCC Pcal_1614 1505120 - 1504845 - | hypothetical protein TERM 815 1504920 - 1504935 + g 73 -3.2 -4.8543 | GTAGTCTAGGCGGCT GGCG AGGTAGAG CGCC TTTTTGTACGCCTTG Pcal_1615 1505935 - 1505129 - | molybdenum cofactor guanylyltransferase TERM 816 1505701 - 1505681 - G 75 -9.7 -3.91716 | GCAGGGGGCAAAGAA CACCTCTTC GTC GAAGTGGTG CAACGCCGTGTCCAC TERM 817 1507007 - 1507029 + G 81 -11.2 -3.89822 | GGTACTCATCCATGA GTCCGCAGGC GGC GCTCGCGGAC TTTGTAAACTACCTA TERM 818 1508111 - 1508094 - g 72 -4.7 -4.64598 | opp_overlap 1508097, overlap 1508082 1508095 TAACTATCCCAAAAA CCCCGCC TTTA GGCCAGG CGTGTTCGACCTACT Pcal_1616 1505971 - 1508991 + | glycoside hydrolase family protein Pcal_1617 1509013 - 1510395 + | extracellular solute-binding protein Pcal_1618 1510395 - 1511318 + | binding-protein-dependent transport systems inner membrane component TERM 819 1511335 - 1511351 + G 74 -13.7 -2.57146 | opp_overlap 1511330, overlap 1511334 GTGTTTCAAACCGCC GTGGCCG CGG CGGCCAC CTTCCTCCTATTCTA Pcal_1619 1511308 - 1512114 + | binding-protein-dependent transport systems inner membrane component Pcal_1620 1512364 - 1512191 - | hypothetical protein Pcal_1621 1512855 - 1512421 - | hypothetical protein TERM 820 1513541 - 1513505 - g 100 -13 -4.53303 | gap 1, overlap 1513506 1513507 GAGTTGTACATAAAA GTGCCCGCGGCGAGG CCCCACCC CCTCGCCGCGGGG-C TTGAGGTAGATCCAA TERM 821 1513541 - 1513506 - g 79 -13.2 -3.315 | overlap 1513505 1513507 AGTTGTACATAAAAG TGCCCGCGGCGAGG CCCCACCC CCTCGCCGCGGGGC TTGAGGTAGATCCAA TERM 822 1513540 - 1513507 - g 85 -16.7 -2.58418 | overlap 1513505 1513506 GTTGTACATAAAAGT GCCCGCGGCGAGG CCCCACCC CCTCGCCGCGGGG CTTGAGGTAGATCCA TERM 823 1513618 - 1513646 + G 71 -10.1 -3.53012 | opp_overlap 1513615, overlap 1513617 TTCGCTTCTAAAGCT GGGTCTGCCTCCC ATT GGGTGGGGGGCCC TTTGGCAAGCCGCCA Pcal_1622 1512857 - 1513858 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pcal_1623 1514086 - 1513850 - | hypothetical protein rpoP 1514244 - 1514086 - | DNA-directed RNA polymerase subunit P Pcal_1625 1514753 - 1514247 - | cytidyltransferase-like protein TERM 824 1514589 - 1514553 - G 71 -7.9 -4.09685 | overlap 1514555 1514558 GGGCACTGTGCAAAA GAGGAGGCGGCAGTTTG GGC CAAAGTGCCGCCTGAAC ATCTCAAGCCTCTCG TERM 825 1514584 - 1514558 - G 84 -15.2 -2.93623 | overlap 1514555 1514553 CTGTGCAAAAGAGGA GGCGGCAGTTTG GGC CAAAGTGCCGCC TGAACATCTCAAGCC Pcal_1626 1515628 - 1514831 - | agmatinase TERM 826 1515014 - 1514984 - G 71 -10.2 -3.54424 | overlap 1514987 1514989 CTCCAGTTTTCTAAA GGAGAGGCCGCCGG CCT CCGGCGTCCCCACG CCTGGCGCCTCGGAG TERM 827 1515011 - 1514987 - G 84 -14.9 -2.90813 | overlap 1514984 1514989 CAGTTTTCTAAAGGA GAGGCCGCCGG CCT CCGGCGTCCCC ACGCCTGGCGCCTCG TERM 828 1515009 - 1514989 - G 77 -13.9 -3.00525 | overlap 1514987 1514984 GTTTTCTAAAGGAGA GGCCGCCGG CCT CCGGCGTCC CCACGCCTGGCGCCT Pcal_1627 1516487 - 1515621 - | cation diffusion facilitator family transporter TERM 829 1516603 - 1516616 + G 70 -3.7 -4.61566 | GCTCGGAGATCTATG GCGGC ATCG GCGGC TTTTATGATTTCGGC Pcal_1628 1516521 - 1518287 + | glycyl-tRNA synthetase Pcal_1629 1518320 - 1518667 + | hypothetical protein Pcal_1630 1518664 - 1519218 + | tRNA-splicing endonuclease subunit alpha Pcal_1631 1519601 - 1519215 - | heat shock protein Hsp20 Pcal_1632 1519867 - 1519649 - | hypothetical protein TERM 830 1519678 - 1519688 + g 74 -8.2 -4.16842 | opp_overlap 1519666, overlap 1519667 CGACGCCTATGATCT CGCC GTA GGCG TTTATTGGGAATGAG Pcal_1633 1519911 - 1520627 + | nitroreductase TERM 831 1520759 - 1520773 + G 74 -7 -4.37092 | GAGAAGGAGTTGCCG GGCCCC GTG GCGGCC TTTTCTGCGCAAGAT TERM 832 1520926 - 1520948 + G 78 -7.6 -4.41353 | GCTGGAGATGTTTGG CGACGTGGAC GTG GGCGACGTCG TTTTAATCTCTGTAG Pcal_1634 1520657 - 1520998 + | hypothetical protein Pcal_1635 1521015 - 1522313 + | actin/actin family protein Pcal_1636 1522340 - 1522951 + | actin-like protein Pcal_1637 1523135 - 1525522 + | SMC domain-containing protein Pcal_1638 1526315 - 1525569 - | transcriptional regulator, TrmB Pcal_1639 1526396 - 1528135 + | radical SAM domain-containing protein Pcal_1640 1529950 - 1528148 - | hypothetical protein Pcal_1641 1530711 - 1529947 - | ABC transporter related TERM 833 1530248 - 1530264 + g 75 -10.8 -3.67775 | overlap 1530253 TTATTCGCGAGAGCC CGCGCC ACCGC GGCGCG TTGTTGCATGCCGCT Pcal_1642 1531886 - 1530702 - | hypothetical protein TERM 834 1530931 - 1530881 - G 79 -12.5 -3.2964 | overlap 1530897 AAATTTGTTTGACAA GCGTGGC-GCCGTAGAAGCCCAGCG CCG CGCCGGCGATCC-CGGCGGCCACGC TTAGCAACGCCACTT TERM 835 1531470 - 1531488 + g 95 -14.6 -3.6682 | opp_overlap 1531454 1531455 GGCCTCGCCCCCCGA GGAGGGGA GTC TCCCCTCC TTTAAGTCAATGGCG TERM 836 1532222 - 1532210 - g 75 -9.1 -4.09685 | opp_overlap 1532210, overlap 1532195 GGCCACCGTTGAAAA CGCCA CTG TGGCG TTTAGAGACGTAGCC TERM 837 1534244 - 1534222 - g 75 -4.1 -4.85599 | gap 1, opp_overlap 1534236, overlap 1534223 1534239 GGGAGGCGATAAAAA GGGCCATCGT CACC AC-AGGGCCC GTGATAACGGGCGCC Pcal_1643 1531899 - 1534499 + | hypothetical protein Pcal_1644 1534477 - 1534656 + | hypothetical protein TERM 838 1535218 - 1535247 + G 70 -3.6 -4.65895 | gap 1 TCAGCTTTAACGACC TCTGC-CAGGCGA AGAGC TGGCTTGAGCAGA TTTTTAAGTAGAAAC Pcal_1645 1534653 - 1535258 + | hydrolase Pcal_1646 1535275 - 1535490 + | hypothetical protein Pcal_1647 1535487 - 1536470 + | PP-loop domain-containing protein Pcal_1648 1537120 - 1536467 - | ACT domain-containing protein TERM 839 1539360 - 1539341 - g 71 -11.4 -3.32698 | gap 1, opp_overlap 1539359, overlap 1539339 CGAGGCGATAGAAGA CCCGCC-CG AGG CGTGGCGGG AGGGCGACGCCCAGC TERM 840 1539589 - 1539559 - g 75 -11.8 -3.24021 | overlap 1539552 1539554 1539561 1539563 CCTGCAAAGAGCCAA TAGACGAGGAAGGC CTC GCCTCCCTCGACTG ACTCTGCGAAAAGGG TERM 841 1539587 - 1539561 - g 86 -14.4 -3.182 | overlap 1539559 1539552 1539554 1539563 TGCAAAGAGCCAATA GACGAGGAAGGC CTC GCCTCCCTCGAC TGACTCTGCGAAAAG TERM 842 1539585 - 1539563 - g 85 -15.6 -3.14671 | overlap 1539561 1539559 1539552 1539554 CAAAGAGCCAATAGA CGAGGAAGGC CTC GCCTCCCTCG ACTGACTCTGCGAAA valS 1537191 - 1539590 + | valyl-tRNA synthetase Pcal_1650 1541867 - 1539612 - | DEAD/DEAH box helicase domain-containing protein Pcal_1651 1542957 - 1541848 - | major facilitator transporter TERM 843 1542817 - 1542799 - G 77 -10.2 -3.81089 | overlap 1542790 1542800 1542813 TACAGACACGAAGAA GGCCGTGG AGA CCACGGCG CCAATGGCCGCCTCG TERM 844 1542816 - 1542800 - G 77 -13.7 -2.8793 | overlap 1542790 1542799 1542813 ACAGACACGAAGAAG GCCGTGG AGA CCACGGC GCCAATGGCCGCCTC Pcal_1652 1543485 - 1542991 - | hypothetical protein Pcal_1653 1543812 - 1544207 + | ferric uptake regulator family protein Pcal_1654 1544197 - 1545114 + | aldo/keto reductase TERM 845 1545286 - 1545307 + G 75 -9.4 -3.83026 | GGTAGTGGGGGCGGG GGTCGTGG GCATGG CCACGGCC TTTCATATCAAGCGC TERM 846 1545322 - 1545341 + G 81 -8.6 -4.3129 | gap 1, opp_overlap 1545319 1545320 CTTTCATATCAAGCG CCTTG-CGC CAC GCGCCAAGG TTTTAGTCGTGGATC Pcal_1655 1545257 - 1546504 + | FAD dependent oxidoreductase Pcal_1656 1546501 - 1546668 + | hypothetical protein Pcal_1657 1546723 - 1547871 + | succinyl-CoA synthetase (ADP-forming) beta subunit Pcal_1658 1547868 - 1548749 + | succinyl-CoA synthetase (ADP-forming) alpha subunit Pcal_1659 1549045 - 1550244 + | 2-aminoadipate aminotransferase Pcal_1660 1550241 - 1551452 + | threonine dehydratase Pcal_1661 1551488 - 1552204 + | Ala-tRNA(Pro) hydrolase TERM 847 1552925 - 1552915 - gT 70 -2.4 -4.76644 | AAGATGCACGAAAAA GAGG CAA CCGC GCTTTCTGGCCTCTT Pcal_1663 1554018 - 1553653 - | hypothetical protein Pcal_1662 1552204 - 1553706 + | sodium/hydrogen exchanger TERM 848 1553863 - 1553893 + gF 75 -5.3 -4.63527 | opp_overlap 1553863, overlap 1553864 TATGACAGACATAAG GGCGATGTGGTAC GCGTG GTACCGCGCCGCG TTTTTGAGCTCCTCC Pcal_1664 1554088 - 1555056 + | hypothetical protein Pcal_1665 1555864 - 1555046 - | metal dependent phosphohydrolase Pcal_1666 1556464 - 1555895 - | 50S ribosomal protein L15e Pcal_1667 1556534 - 1556842 + | CutA1 divalent ion tolerance protein Pcal_1668 1556835 - 1558070 + | cofactor-independent phosphoglycerate mutase Pcal_1669 1558067 - 1558333 + | hypothetical protein Pcal_1670 1558921 - 1558304 - | hypothetical protein Pcal_1671 1560044 - 1558899 - | major facilitator transporter TERM 849 1559041 - 1559015 - G 71 -10.8 -3.56568 | CAATGAGGGGGTAAA GCGTGGGCCCAA TGA TCATGCCCACGC GCGCCGCAGAGCCGG Pcal_1672 1560796 - 1560041 - | hypothetical protein TERM 850 1560840 - 1560823 - R 74 -2.8 -5.00616 | opp_overlap 1560815 GCTGGTCGTAAAAAA GTTTTA CTTCTT TAAAAC GTCCTTGAACTGCTC Pcal_1673 1562469 - 1560826 - | AMP-dependent synthetase and ligase Pcal_1674 1562554 - 1563741 + | succinyl-diaminopimelate desuccinylase Pcal_1675 1564566 - 1563742 - | nitroreductase TERM 851 1564740 - 1564755 + G 70 -2.5 -4.8543 | overlap 1564750 CGCCTCCACCTCTAT TGGTC AATTGC GGCCA TTTTTGTGGCGGTTG Pcal_1676 1564569 - 1564886 + | hypothetical protein TERM 852 1565068 - 1565042 - g 70 -3.7 -4.62069 | gap 2, overlap 1565043 GTTGGATGGGAAAAA CCCCCTACGCGTC CTT GACGC--AGGGGC TGGGCCTGGGAACAT TERM 853 1565159 - 1565181 + G 100 -13.4 -4.72846 | opp_overlap 1565153 1565156, overlap 1565161 TCGCGCAAACGACGT GGCCGACGAC AAA GTCGTCGGGC TTTTTGAATATATGC TERM 854 1565161 - 1565179 + G 78 -14.6 -2.65068 | opp_overlap 1565153 1565156, overlap 1565159 GCGCAAACGACGTGG CCGACGAC AAA GTCGTCGG GCTTTTTGAATATAT Pcal_1677 1564890 - 1565567 + | hypothetical protein Pcal_1678 1566537 - 1565581 - | hypothetical protein Pcal_1679 1566821 - 1566534 - | hypothetical protein Pcal_1680 1567499 - 1566876 - | hypothetical protein Pcal_1681 1567861 - 1567499 - | hypothetical protein Pcal_1683 1569173 - 1568511 - | hypothetical protein Pcal_1682 1567944 - 1568579 + | hypothetical protein TERM 855 1568682 - 1568666 - GT 76 -9.3 -3.76232 | opp_overlap 1568675, overlap 1568667 TGGCCAAATATATAA TGCCGCC AAC GGCGGCC GCCGTTGCGTAGATC TERM 856 1568681 - 1568667 - GT 78 -12.8 -2.85257 | opp_overlap 1568675, overlap 1568666 GGCCAAATATATAAT GCCGCC AAC GGCGGC CGCCGTTGCGTAGAT TERM 857 1568818 - 1568793 - GT 82 -6.1 -4.72272 | gap 1, opp_overlap 1568794 1568805, overlap 1568794 CGCCGCGACTAAAAA CCAGCT-CTCCG ACG CGGAGTAGCCGT GTTTCAGGGCGAAGC TERM 858 1568817 - 1568794 - GT 71 -9.6 -3.43042 | gap 1, opp_overlap 1568794 1568805, overlap 1568793 GCCGCGACTAAAAAC CAGCT-CTCCG ACG CGGAGTAGCCG TGTTTCAGGGCGAAG TERM 859 1568957 - 1568938 - GT 73 -11.4 -2.54634 | overlap 1568937 GGGTATAGTATGAAG GTGGCCAC GGAG GCGGCCAC AGCCGTCAGGGAATA Pcal_1684 1569616 - 1569152 - | hypothetical protein Pcal_1685 1570076 - 1569609 - | hypothetical protein TERM 860 1569854 - 1569826 - G 74 -10.9 -3.5393 | ACTACGCCGGGCAAA GCCGCCGCGAGCA ACG TCCTCAAGGCGGC GAATTCCCCATATGG Pcal_1686 1571906 - 1570137 - | putative ATPase RIL Pcal_1687 1572179 - 1571952 - | hypothetical protein Pcal_1688 1573234 - 1572170 - | glycosyl transferase family protein Pcal_1689 1573351 - 1573863 + | CopG/DNA-binding domain-containing protein Pcal_1690 1573885 - 1574166 + | hypothetical protein Pcal_1691 1574879 - 1574154 - | hypothetical protein Pcal_1692 1574917 - 1575921 + | sugar phospate transferase Pcal_1693 1578684 - 1575898 - | DEAD/DEAH box helicase domain-containing protein Pcal_1694 1578727 - 1579281 + | hypothetical protein Pcal_1695 1580103 - 1579258 - | signal transduction protein Pcal_1696 1580677 - 1580120 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 861 1580168 - 1580186 + g 78 -3 -5.08824 | opp_overlap 1580146 1580163, overlap 1580163 GGCCTTAAAGGCCTT CGCCCTAT GGG AAATGGCG TTTTTTACCTCGGCG Pcal_1697 1581433 - 1580702 - | glutaredoxin-like domain-containing protein Pcal_1698 1581889 - 1581506 - | hypothetical protein Pcal_1699 1582853 - 1581924 - | malate dehydrogenase Pcal_1700 1584265 - 1582919 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pcal_1701 1585409 - 1584288 - | FAD dependent oxidoreductase TERM 862 1584660 - 1584641 - G 83 -5.6 -4.91511 | ATGGGACTAGAAAAA CGCCACCT ATAA AGTCGGCG ACTGTAGGACCGGAC TERM 863 1585227 - 1585248 + g 70 -5.1 -4.54553 | gap 1, overlap 1585229 CCACATCTTTATGTA CCTGACGGGG TAA CCCC-TCACG TTTATTCTATTTATC Pcal_1702 1585874 - 1585446 - | thioredoxin domain-containing protein TERM 864 1586424 - 1586481 + G 76 -13.4 -2.7752 | gap 3, opp_overlap 1586418 1586420, overlap 1586426 1586479 CCGACGACATAGCGG CCGCGCTGGCCCACA-CGCCGCGGATGCT CGT GGCCGCCGCCGCGCTGTGGGTC-GC-CGG CTTTGACGTAGTGTA TERM 865 1586426 - 1586482 + G 71 -10 -3.63068 | gap 2, opp_overlap 1586418 1586420, overlap 1586424 1586479 GACGACATAGCGGCC G-CGCTGGCCCACA-CGCCGCGGATGCT CGT GGCCGCCGCCGCGCTGTGGGTCGCCGGC TTTGACGTAGTGTAC Pcal_1703 1585928 - 1586803 + | 4-hydroxybenzoate polyprenyltransferase, putative Pcal_1704 1587800 - 1586781 - | major facilitator transporter Pcal_1705 1588443 - 1587853 - | 50S ribosomal protein L6P TERM 866 1587910 - 1587934 + g 83 -9.9 -4.2558 | TACTACGCCTAGGCC GCCCTCGCGTC CGT GAGGCGACGGC TTTTCCTCGCCCCTC Pcal_1706 1588520 - 1589662 + | radical SAM domain-containing protein Pcal_1707 1589652 - 1590542 + | porphobilinogen deaminase Pcal_1708 1591510 - 1590539 - | AsnC family transcriptional regulator Pcal_1709 1592645 - 1591629 - | delta-aminolevulinic acid dehydratase TERM 867 1591920 - 1591950 + g 74 -14 -2.68279 | overlap 1591913 AAGGTCCATGGCCAC CTCCTTCAACGCCT CGT AGGCGTTGCGGGGG TCCATTTGGTAAGTC TERM 868 1592572 - 1592590 + g 72 -8.8 -3.81488 | opp_overlap 1592550 GCGTCGATCTGCGTC TCAGCGAC GGC GTCGCGGA TTATCTTTGAGGCAC Pcal_1710 1593304 - 1592666 - | siroheme synthase TERM 869 1592890 - 1592925 + g 75 -11.9 -3.28924 | opp_overlap 1592896, overlap 1592896 CCTCAATCACGTCCA GAGAGAGGCG-CGCGGG GGCT CCCGCGGCGCCT-TCGC TTGTGACAGCCACTC TERM 870 1592896 - 1592920 + g 87 -15 -3.23274 | gap 1, opp_overlap 1592896, overlap 1592890 TCACGTCCAGAGAGA GGCG-CGCGGG GGCT CCCGCGGCGCC TTCGCTTGTGACAGC TERM 871 1592920 - 1592896 - G 84 -15 -2.99471 | gap 1, opp_overlap 1592896 1592890 TCACGTCCAGAGAGA GGCG-CGCGGG GGCT CCCGCGGCGCC TTCGCTTGTGACAGC Pcal_1711 1593522 - 1593328 - | hypothetical protein Pcal_1712 1594153 - 1593539 - | uroporphyrinogen III synthase HEM4 Pcal_1713 1594902 - 1594156 - | uroporphyrin-III C-methyltransferase TERM 872 1594644 - 1594632 - G 77 -10.5 -3.81488 | CTCGGCCAAAGACAA GGGGG TCG CCCCC ATGCAACCTCACCAC Pcal_1714 1595461 - 1594925 - | hypothetical protein Pcal_1715 1595507 - 1596094 + | HAD family hydrolase Pcal_1716 1597188 - 1596052 - | radical SAM domain-containing protein TERM 873 1596110 - 1596121 + g 70 -3.6 -4.56597 | opp_overlap 1596096, overlap 1596096 1596095 ACGCAGGCTGGGTCC TCCG CCAG CGGG TTTTTAAACACGGCG Pcal_1717 1598537 - 1597212 - | glutamate-1-semialdehyde 2,1-aminomutase TERM 874 1598605 - 1598566 - H 73 -11.3 -2.78596 | opp_overlap 1598575, overlap 1598533 TAGCCTGGTAGGATA GGGCACAGCCCCCCAAG GCGTGG CTTGGGAGGCGCAGCCC AAGCCCCCACGTGAC TERM 875 1599054 - 1599029 - H 72 -6.7 -4.21936 | gap 1, opp_overlap 1599030, overlap 1599030 GTCACAAGTTGAAAA TGGCGTGG-CGG TAG CCGGCCCCGCCT TCATTCATCCCCGTG TERM 876 1599030 - 1599053 + H 72 -10.2 -3.40073 | gap 1, opp_overlap 1599029 1599030 TCACAAGTTGAAAAT GGCGTGG-CGG TAG CCGGCCCCGCC TTCATTCATCCCCGT TERM 877 1599569 - 1599544 - g 90 -8.3 -4.87665 | gap 1, overlap 1599563 1599565 CGCCATTGAGAAAAA CGAGGCGCTCCT CAG AGGAG-ACCCCG GGGGCAGAGTGTACC Pcal_1718 1599113 - 1600522 + | gamma-glutamyltransferase TERM 878 1600646 - 1600622 - T 81 -8.5 -4.36595 | GAGGCAAATGTAAAA GGCATGGGAGC GGT GCTCGTATGCC CCGACTGTTGGTCAA Pcal_1719 1603371 - 1601302 - | hypothetical protein TERM 879 1603871 - 1603840 - H 81 -10 -3.86346 | opp_overlap 1603870 GTATGGGCTTATAAA GCGCCCTGCACCGC GTTC ACGGTAGGGGGCGC CGAGGAATAGACGGC Pcal_1720 1603918 - 1604667 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 880 1604898 - 1604942 + G 100 -19.3 -3.32343 | opp_overlap 1604906 TGTTCGGCCACCTGG GCGACAGAGTGGGGAGGAAGG CCA CCTTCCTCGCCACATTGACGC TTATGGGGCTCTCCA TERM 881 1604934 - 1604906 - g 90 -17.5 -2.87344 | opp_overlap 1604898 CACCTGGGCGACAGA GTGGGGAGGAAGG CCA CCTTCCTCGCCAC ATTGACGCTTATGGG Pcal_1721 1604660 - 1605958 + | general substrate transporter TERM 882 1606034 - 1606065 + G 75 -8.6 -4.06964 | TAGGCGTAGTGGAAG TCGGCTTGCCCCGC AGCG GCGGGGTAGACAGA TTTAGTTATGTATCT Pcal_1722 1605994 - 1606476 + | hypothetical protein guaA 1607990 - 1606473 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 883 1607961 - 1607981 + g 70 -3.9 -4.56597 | overlap 1607962 GTGGGCGTACTGGCC TCCGAAGTT TAC AACTACGGC TTTTTCCACGGGGCC Pcal_1724 1609253 - 1608018 - | hypothetical protein Pcal_1725 1609764 - 1609285 - | hypothetical protein TERM 884 1609473 - 1609447 - G 82 -14.5 -2.87132 | gap 1 CGGCTTTGGTAGACA CTGCTGCGGCCC CTCT GGGCC-CAGCAG GGCTCCGAGGGCCAG Pcal_1726 1611056 - 1609761 - | signal recognition particle subunit FFH/SRP54 (srp54) Pcal_1727 1611917 - 1611087 - | putative circadian clock protein, KaiC Pcal_1728 1612415 - 1611990 - | methyltransferase type 11 Pcal_1729 1612462 - 1612761 + | 50S ribosomal protein L21e Pcal_1730 1613521 - 1612772 - | GTPase Pcal_1731 1613821 - 1613528 - | signal recognition particle, subunit SRP19 (srp19) Pcal_1732 1614213 - 1613818 - | 30S ribosomal protein S8e TERM 885 1614216 - 1614233 + H 78 -9.1 -3.93695 | CCCCCAGCTTCACGC CCCCACT ACTT GGTGGGG TTTATAAGTCATCAG TERM 886 1614354 - 1614395 + G 71 -7.9 -4.0827 | gap 1, overlap 1614356 CTCTTCACTACTCAC GTATGGGGAACCTCGTGGTG CGT CTCTCCGAGGTTCCCCC-GC TTTATGTAAATGTGT TERM 887 1614479 - 1614468 - g 71 -7.2 -4.19238 | opp_overlap 1614468 TTGGCAACGTTAAAA GCCC CTAC GGGC TTGTAAAGCCCCTAG Pcal_1733 1614320 - 1614568 + | H/ACA RNA-protein complex component Gar1 TERM 888 1614646 - 1614630 - g 76 -3 -4.87665 | CGGCAGCGACAAAAA CATAGT TATCG ACTACG AGGGGGGGCAGATAA Pcal_1734 1614565 - 1615461 + | zinc finger TFIIB-type domain-containing protein Pcal_1735 1615484 - 1615933 + | MarR family transcriptional regulator TERM 889 1616164 - 1616181 + G 79 -12.7 -3.28712 | overlap 1616175 ATGAGGTTGAGCGGA GTCGGGG TCTT CCCCGAC TTGTCAAGGCCGCGG Pcal_1736 1615930 - 1616490 + | 2'-5' RNA ligase TERM 890 1616573 - 1616555 - g 83 -5.9 -4.93296 | overlap 1616557 CGAGGAGGAGAAAAA GGTGGCC GAAGT GGCCAGC AACGTTAAAGGTCTC Pcal_1737 1616487 - 1617743 + | tRNA CCA-pyrophosphorylase Pcal_1738 1617780 - 1618199 + | hypothetical protein Pcal_1739 1618977 - 1618177 - | hypothetical protein Pcal_1740 1619974 - 1618964 - | aminotransferase, class V TERM 891 1619641 - 1619661 + g 76 -12.5 -3.052 | TCAAAACGTCGTCGA CCTCGTCGG GGG CCGGCGGGG TGTCTCTCTCCAGCT TERM 892 1619832 - 1619852 + g 72 -6.1 -4.36914 | ATTACCACAGGCGTT GCTGGGT AGAGCGC GCCCAGC TTTTCTAAAACCGAC Pcal_1741 1620891 - 1619971 - | D-3-phosphoglycerate dehydrogenase TERM 893 1620969 - 1620949 - H 91 -7.6 -5.14563 | gap 1 CGTGTGATGAAAAAA CGGTC-TGG CGAC CCATGACCG GGAGACCGATCGCTG Pcal_1742 1621016 - 1621876 + | signal transduction protein Pcal_1743 1622612 - 1621845 - | kinase TERM 894 1622331 - 1622343 + g 78 -6.2 -4.60924 | CGCCACTCTTCCGAT GCCC CTAGA GGGC TTTTTCAACAGTTTC Pcal_1744 1622668 - 1623636 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Pcal_1745 1623638 - 1624612 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 895 1624736 - 1624709 - g 82 -10.6 -4.23723 | gap 1, opp_overlap 1624722, overlap 1624726 GAAGAGGACTTAAAA CGCG-ACGACGTA ATT TACGTCGAGCGCG TCCCAGCTCCAAGAG Pcal_1746 1624643 - 1625074 + | hypothetical protein Pcal_1747 1625784 - 1625071 - | 30S ribosomal protein S4e TERM 896 1625393 - 1625408 + g 93 -11.8 -4.3208 | TGTAGCTGAATTCTG CCGCCG CTTA CGGCGG TTTTACCTTCTACAC rpl24p 1626157 - 1625771 - | 50S ribosomal protein L24P Pcal_1749 1626357 - 1627643 + | beta-lactamase domain-containing protein Pcal_1750 1627791 - 1628102 + | hypothetical protein Pcal_1751 1628577 - 1628077 - | hypothetical protein Pcal_1752 1628639 - 1629067 + | NUDIX hydrolase TERM 897 1629527 - 1629516 - g 70 -3.6 -4.63928 | overlap 1629518 1629525 ATACCAGGTGAAAAA GCCC GAAG AGGC CACGGCCGCGGTCAA Pcal_1753 1629085 - 1630857 + | acetolactate synthase, large subunit Pcal_1754 1630844 - 1631098 + | hypothetical protein Pcal_1755 1631129 - 1632115 + | ketol-acid reductoisomerase TERM 898 1632814 - 1632800 - g 70 -4.2 -4.69664 | overlap 1632802 CAGACGATCTAAAAA TCCCCG TGG CGGAAA AGCCCGTGACTAGAG Pcal_1756 1632112 - 1633023 + | branched-chain amino acid aminotransferase ribH 1633472 - 1633020 - | riboflavin synthase subunit beta Pcal_1758 1633550 - 1633738 + | hypothetical protein TERM 899 1634280 - 1634255 - g 72 -6.7 -4.3208 | opp_overlap 1634272, overlap 1634256 1634257 CTGCAGAATTCAAAA CGGCGCCGCTT ATTG AGGCGGCGCTA GTAATGCCGCTTGTG Pcal_1759 1633768 - 1634553 + | polyprenyl synthetase TERM 900 1634679 - 1634646 - g 72 -4.6 -4.56597 | gap 1, overlap 1634649 CCGGCGTGGGAAAAA CGACGCTAGTACTAA GAGTG TTAGAACTGGCG-CG GAGTAAATATCGCTG Pcal_1760 1634579 - 1635106 + | putative NTPase Pcal_1761 1635607 - 1635095 - | Miro domain-containing protein Pcal_1762 1635823 - 1635996 + | paREP4 Pcal_1763 1637016 - 1636018 - | cell division protein pelota TERM 901 1636580 - 1636560 - G 91 -16.9 -3.59698 | GCACTGTATACATAA TCTCGGCGC CTA GCGCCGAGA TGTACGCTAAAGCCG Pcal_1764 1637814 - 1637308 - | hypothetical protein Pcal_1765 1638518 - 1637811 - | beta-lactamase domain-containing protein TERM 902 1638841 - 1638823 - g 90 -7.4 -5.06414 | TTGCGTCAATAAAAA GCCACG TAAAAAT CGTGGC CGTGCCTGTGCACTT Pcal_1766 1638564 - 1639901 + | UDP-glucose/GDP-mannose dehydrogenase Pcal_1767 1640431 - 1639871 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Pcal_1768 1640582 - 1640833 + | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit Pcal_1769 1640830 - 1641981 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Pcal_1770 1641978 - 1642871 + | 2-ketoisovalerate ferredoxin oxidoreductase subunit beta TERM 903 1643599 - 1643585 - g 71 -7.8 -4.04474 | ATAGTGTTAGACAAA GAGGTG GTG CACCCC GGCATGCCTAAGAGA Pcal_1771 1642910 - 1644574 + | thermosome subunit rpoK 1644622 - 1644954 + | DNA-directed RNA polymerase subunit K Pcal_1773 1645120 - 1644914 - | hypothetical protein Pcal_1774 1645851 - 1645120 - | ABC transporter related TERM 904 1645362 - 1645388 + g 71 -10.1 -3.62224 | opp_overlap 1645360 1645362 CGTCCAGCATCAACA GCGTCGGCTTC TTCAT GAGGCCGAGGC TTATTGCAAGCATCT Pcal_1775 1645915 - 1647216 + | extracellular ligand-binding receptor TERM 905 1648067 - 1648079 + G 78 -9.1 -4.21194 | TGCGCCTAGGGAGCC CGTGG TCC CCACG TTTTACCTCGTGAAG Pcal_1776 1647705 - 1648160 + | aspartate carbamoyltransferase regulatory subunit pyrE 1648157 - 1648735 + | orotate phosphoribosyltransferase Pcal_1778 1648723 - 1649607 + | dihydroorotate dehydrogenase Pcal_1779 1650073 - 1649585 - | hypothetical protein Pcal_1780 1651917 - 1650067 - | hypothetical protein Pcal_1781 1652761 - 1651934 - | endonuclease IV Pcal_1782 1652801 - 1654036 + | pseudouridylate synthase TERM 906 1654528 - 1654518 - g 71 -6.8 -4.15543 | overlap 1654510 GAAAGATTCGCAAAA CCTC TAC GAGG GGTTCAGGGCCTTGT Pcal_1783 1654072 - 1654863 + | hypothetical protein rpl14p 1654958 - 1655392 + | 50S ribosomal protein L14P Pcal_1785 1655460 - 1655777 + | hypothetical protein TERM 907 1655996 - 1655958 - g 78 -8 -4.49311 | opp_overlap 1655958 1655959, overlap 1655959 AGGAGGAGGAGAAAA GGCTGAGGGCCCTCTACC GCG AGTTAAAGGCCCTCGGCA TTTCTCCAAGCGACT TERM 908 1655995 - 1655959 - g 71 -11.5 -3.28864 | opp_overlap 1655958 1655959, overlap 1655958 GGAGGAGGAGAAAAG GCTGAGGGCCCTCTACC GCG AGTTAAAGGCCCTCGGC ATTTCTCCAAGCGAC Pcal_1786 1655759 - 1656142 + | hypothetical protein Pcal_1787 1657788 - 1656478 - | S-adenosyl-L-homocysteine hydrolase TERM 909 1656993 - 1656979 - G 74 -11.4 -3.62096 | opp_overlap 1656990, overlap 1656990 GGGCATGACTTCAAA GCCGTC GAA GACGGC CTCAAGGGCCCTGAT TERM 910 1658430 - 1658451 + G 73 -2.8 -4.8048 | overlap 1658439 GCTAAAGCGGGTATT GGCCGGGC TCGGTT GCACTGCC TTTTTCGTGTCGCAG Pcal_1788 1657954 - 1658811 + | hypothetical protein TERM 911 1659031 - 1659013 - g 80 -10.2 -4.09685 | opp_overlap 1659003, overlap 1659014 TTCCAGCCTCTAAAA TCGCCGAG GAG CTCGGCGT AACAGAGGCTACTGT TERM 912 1659030 - 1659014 - g 79 -13.7 -3.05597 | opp_overlap 1659003, overlap 1659013 TCCAGCCTCTAAAAT CGCCGAG GAG CTCGGCG TAACAGAGGCTACTG Pcal_1789 1658814 - 1659236 + | hypothetical protein Pcal_1790 1659227 - 1659892 + | phosphoenolpyruvate synthase Pcal_1791 1661196 - 1659889 - | hypothetical protein Pcal_1792 1661253 - 1661837 + | hypothetical protein Pcal_1793 1662320 - 1661838 - | hypothetical protein Pcal_1794 1662817 - 1662317 - | thiol:disulphide interchange protein, putative TERM 913 1662861 - 1662847 - R 71 -2.8 -4.83169 | opp_overlap 1662847 ATTTCCGTATAAAAA TTCAGC CGT GATGAA GTTGGTCTTTTCAGA Pcal_1795 1663375 - 1663085 - | transposase, IS605 OrfB TERM 914 1663137 - 1663122 - G 77 -2.4 -5.03715 | overlap 1663123 ATCAGTGGGAAAAAA GCGGGG GGTG CCCAAC CTCTTGCAAGCCTTT Pcal_1796 1663461 - 1664198 + | hypothetical protein Pcal_1797 1664268 - 1666829 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Pcal_1798 1666871 - 1667341 + | hypothetical protein Pcal_1799 1668315 - 1667605 - | hypothetical protein Pcal_1800 1668534 - 1669010 + | hypothetical protein Pcal_1801 1670270 - 1670536 + | hypothetical protein TERM 915 1670723 - 1670700 - g 77 -2.4 -5.0538 | gap 1, overlap 1670706 CGTCAGTTGAAAAAA GAGATAGACGA GCT CCGCC-ACCTC TACAACCAGCTGTCT TERM 916 1671292 - 1671274 - g 72 -4.6 -4.61199 | overlap 1671278 ACGCCATATACAAAA TAGAGG GGGAGGA CCTCTA CCTAATAGCCACGGC TERM 917 1671366 - 1671338 - g 79 -13.2 -3.31144 | opp_overlap 1671357 CGCCTACCTCTACAA GAGGGAACTCCT AGAGG AGGAGCTCCCCC AGCTCTATGTCGGGT Pcal_1802 1670565 - 1671929 + | seryl-tRNA synthetase Pcal_1803 1672017 - 1672550 + | hypothetical protein TERM 918 1673062 - 1673033 - g 75 -5.8 -4.69622 | opp_overlap 1673036 1673042 AGAGAATTCTAAAAA CAAGCGTCGT-GCC AGGG GGCTACGA-GCTCG TTGACCCTTGGAGTA pyrH 1672537 - 1673190 + | uridylate kinase Pcal_1805 1673298 - 1673723 + | histidine triad (HIT) protein Pcal_1806 1675400 - 1674195 - | translation-associated GTPase TERM 919 1674587 - 1674603 + g 88 -15.1 -3.53012 | opp_overlap 1674587, overlap 1674595 GCTTATATTTCACAA GGCCGCG CTC CGCGGCC TTTCGCAGGGCCAAC TERM 920 1674603 - 1674587 - G 87 -15.1 -3.34962 | opp_overlap 1674587 1674595 GCTTATATTTCACAA GGCCGCG CTC CGCGGCC TTTCGCAGGGCCAAC TERM 921 1675145 - 1675104 - G 78 -6.5 -4.58283 | gap 1 CAAGTGGTCTAAAAA CTGGTTTCCAAGCCCCCTGC CCT GCCAAGCGCCCGGA-ACCAG GCCTGCGACGTCTAT TERM 922 1676456 - 1676432 - g 76 -4.9 -4.85599 | overlap 1676454 CGTATGTGAGAAAAA TCCCCATTGTC ACA GACAGAGAGGA GGTGGCCGCCTATGC Pcal_1807 1675429 - 1676634 + | hypothetical protein TERM 923 1677140 - 1677128 - g 76 -3.3 -4.9218 | opp_overlap 1677128, overlap 1677138 GATCGACGAGAAAAA GCCGA GAG TAGGC TTTGTTAAAGCGATA Pcal_1808 1676658 - 1678625 + | signal-transduction protein TERM 924 1679828 - 1679807 - g 72 -5.8 -4.55287 | TGGATTTAGATAAAA TAGCCGAG ATGACG CACGGCTA CACTGGCGCAGATAT TERM 925 1680324 - 1680312 - g 86 -9.1 -4.57569 | opp_overlap 1680312 1680318 CGAGGTGTTTAAAAA GGCCA GGA TGGCC GCGCCTTGCGTCATC TERM 926 1680384 - 1680364 - g 76 -12.5 -3.14839 | overlap 1680362 GAGATAGACTCAATA GCGCCTGCC AGA GGCACGCGC CTCGGCGACTCTGGC Pcal_1809 1678654 - 1680864 + | AAA family ATPase, CDC48 subfamily protein Pcal_1810 1680899 - 1681429 + | heat shock protein Hsp20 Pcal_1811 1681871 - 1681416 - | hypothetical protein Pcal_1812 1681911 - 1682993 + | THUMP domain-containing protein rps11p 1683013 - 1683438 + | 30S ribosomal protein S11P Pcal_1814 1683439 - 1683702 + | hypothetical protein Pcal_1815 1684004 - 1685098 + | radical SAM domain-containing protein Pcal_1816 1685608 - 1685417 - | arsenite transport protein Pcal_1817 1685644 - 1686300 + | hypothetical protein TERM 927 1686367 - 1686398 + GT 95 -15.8 -2.72344 | gap 1 TGTTGCTCGGCCCCA CCGCCTGGGGCTCGG GGG CCGGGCCCC-GGAGG TCCTTCGCCATAGCC Pcal_1819 1687683 - 1687012 - | hypothetical protein Pcal_1818 1686300 - 1687067 + | hypothetical protein Pcal_1820 1687882 - 1687709 - | paREP4 TERM 928 1688199 - 1688229 + H 72 -11 -3.03243 | TTAGAGACGCACAGG GCCCGTAGCTCAGC CTG GTAGAGCGGCGGGC TCTTAACCCGTAGGT Pcal_1821 1688542 - 1688784 + | deoxyribonuclease Pcal_1822 1689901 - 1688777 - | tryptophanyl-tRNA synthetase Pcal_1823 1690696 - 1689938 - | HhH-GPD family protein TERM 929 1690731 - 1690706 - R 79 -10.3 -3.81951 | overlap 1690701 GTTCATATCATGAAA GCCGGCACGCC GTCC GGCGTCACGGC GCGGGTCGGCTTGAG Pcal_1824 1691478 - 1690693 - | radical SAM domain-containing protein Pcal_1825 1691668 - 1691943 + | 50S ribosomal protein L31E Pcal_1826 1691940 - 1692605 + | translation initiation factor IF-6 Pcal_1827 1692825 - 1693061 + | 50S ribosomal protein LX Pcal_1828 1693063 - 1693467 + | prefoldin subunit alpha Pcal_1829 1693467 - 1694384 + | signal recognition particle-docking protein FtsY Pcal_1830 1694566 - 1694862 + | hypothetical protein nusG 1694862 - 1695326 + | transcription antitermination protein NusG Pcal_1832 1695360 - 1695860 + | 50S ribosomal protein L11P rpl1P 1695857 - 1696525 + | 50S ribosomal protein L1P rplP0 1696557 - 1697591 + | acidic ribosomal protein P0 Pcal_1835 1697591 - 1698523 + | mevalonate kinase Pcal_1836 1698520 - 1698768 + | hypothetical protein Pcal_1837 1698771 - 1699556 + | uridine phosphorylase Pcal_1838 1699528 - 1699764 + | hypothetical protein Pcal_1839 1699805 - 1700233 + | hypothetical protein Pcal_1840 1700606 - 1700223 - | heat shock protein Hsp20 Pcal_1841 1701527 - 1700628 - | inner-membrane translocator Pcal_1842 1702516 - 1701524 - | inner-membrane translocator Pcal_1843 1703946 - 1702513 - | ABC transporter related Pcal_1844 1705188 - 1703947 - | basic membrane lipoprotein Pcal_1845 1705535 - 1705203 - | hypothetical protein Pcal_1846 1707615 - 1705519 - | penicillin amidase TERM 930 1705969 - 1705951 - G 76 -7.3 -4.43877 | CAACGTGTAAACAAA CGTGGCG TATCT CGCCGCG GCAACGGAGTCCGCG TERM 931 1706360 - 1706342 - G 74 -11 -3.5365 | overlap 1706333 1706332 1706343 TTAAACGGGAGATAA CCCCCATC TCT GATGGGGA AATAGCCGCTGGCAA TERM 932 1706359 - 1706343 - G 70 -12.3 -2.71708 | overlap 1706333 1706332 1706342 TAAACGGGAGATAAC CCCCATC TCT GATGGGG AAATAGCCGCTGGCA TERM 933 1706420 - 1706381 - G 74 -7.8 -4.17048 | opp_overlap 1706388 CCGCTGGCAAAATAA GCCACTACGCCGTGTATG TCTG CATAAACGGTGTTCTGGC TGGGGACTACGAAGT Pcal_1847 1707721 - 1708029 + | hypothetical protein Pcal_1848 1708029 - 1708328 + | hypothetical protein rpl40e 1708490 - 1708329 - | 50S ribosomal protein L40e TERM 934 1708402 - 1708416 + g 71 -7.8 -3.97602 | overlap 1708403 TCCGCGTCTGGCGGA TTGCGG GCG CCGCAG TTTCTACATATCTTG TERM 935 1709903 - 1709865 - g 77 -10.8 -3.89822 | opp_overlap 1709893, overlap 1709852 GAGTGACGCTAGAAA CGCCCCCGCCGCTCCCCA GAG TCGAGTGCGGCTGGAACG ACCTAGCCGTGTTGA Pcal_1850 1708544 - 1710466 + | hypothetical protein Pcal_1851 1710976 - 1710461 - | hypothetical protein Pcal_1852 1711014 - 1711589 + | hypothetical protein Pcal_1853 1712326 - 1711586 - | hypothetical protein TERM 936 1711927 - 1711911 - G 72 -9.3 -3.6422 | overlap 1711909 CACCCCTCCAAAAGA GCCGGGG CCA CCCCGTC CAAGACGTAGCTCCT TERM 937 1712048 - 1712036 - G 78 -9.1 -4.15044 | CGGGGGGTCAATAAA GACGC GCG GCGTC CCGTGGTCCACCGCA TERM 938 1713685 - 1713668 - g 78 -6.3 -4.57073 | GAGCTCGTGCAAAAA TTCGAAG AAGC CCTCGAA GACAGCGGAGTGCCC Pcal_1854 1712360 - 1713778 + | CoA-binding domain-containing protein Pcal_1855 1713775 - 1714473 + | ATP-grasp domain-containing protein Pcal_1856 1714493 - 1715026 + | hypothetical protein Pcal_1857 1716269 - 1714995 - | hypothetical protein TERM 939 1715855 - 1715841 - G 78 -6.4 -4.69027 | overlap 1715842 1715845 AAACTCAGTCAAAAA CCTAGG CTC CCTAGA CGCCGCCCTATACAC Pcal_1858 1717843 - 1716269 - | ATPase TERM 940 1718124 - 1718104 - g 80 -14.7 -2.7185 | AGTACGGCGCAATCA TGCCAGCCG TCG CGGCCGGCA TAATAATCACACTCC Pcal_1859 1717965 - 1718324 + | hypothetical protein TERM 941 1718513 - 1718489 - T 100 -15 -3.34715 | gap 1, overlap 1718487 1718504 GAGTCTCGCGAAAGA CGGCTGGGCGG AAAA CCGCCC-GCCG AAGCGTCTCCGCTAG Pcal_1860 1718788 - 1718525 - | hypothetical protein Pcal_1861 1719818 - 1718820 - | hypothetical protein TERM 942 1719852 - 1719842 - R 100 -8.2 -5.44638 | overlap 1719843 AGAATAAAAACAAAA CGCC CCC GGCG CTACCCCACGTCTAC TERM 943 1719888 - 1719873 - R 71 -3.2 -4.84359 | overlap 1719886 CCACGTCTACAAAAA GCGAGT AAAA ATTCGC GAGGCCCGGCGTAAA Pcal_1862 1720878 - 1719853 - | hypothetical protein Pcal_1863 1721939 - 1720875 - | hypothetical protein TERM 944 1721639 - 1721624 - G 71 -11.8 -2.9914 | overlap 1721611 TAGGCGGCACACAGA GGGGGC GAAA GCCCCC CTCAAAGACCCCCTC TERM 945 1723308 - 1723292 - g 74 -11.5 -3.55219 | AAGCCCAGCACAGAA GAGGGGC CCC GCCCCCC GCACCCTCGCCGAGA Pcal_1864 1722086 - 1723966 + | hypothetical protein TERM 946 1724412 - 1724387 - f 73 -11.8 -2.71712 | overlap 1724386 CCCCTTCCCCGAAAG GGCTGGCGGC CGATCC GCCGCCAGTC GCCCGAGGGTGGGGG TERM 947 1724600 - 1724618 + F 100 -13.1 -4.10657 | opp_overlap 1724612 GGGGCTACCCCGAGT GCCGGGC GAAGA GCCCGGC TTTTGCCCGGTCTAA TERM 948 1724781 - 1724761 - f 74 -10.3 -3.53343 | overlap 1724762 AAGTCGCTCCTGAAA TCCCCGGGC TCA ACCCGGGGG CCGGGGGCGATACTG TERM 949 1724780 - 1724762 - f 85 -13.8 -2.71791 | overlap 1724761 AGTCGCTCCTGAAAT CCCCGGGC TCA ACCCGGGG GCCGGGGGCGATACT TERM 950 1726133 - 1726121 - f 81 -10.5 -3.59979 | GCCCCGTAGGCGAAA CCGCC CGT GGCGG AGTCCCGGGGTCCCG TERM 951 1726271 - 1726260 - f 72 -7.2 -4.2354 | GAAAGCTGAAAAGAA CCCC GGAA GGGG GGTGAAAAGAGCCTG TERM 952 1726355 - 1726342 - f 78 -9.5 -3.90112 | CCCTCCCGAAGGAAA CCCCG GTGA CGGGG GAGTACGAGGGAGGG TERM 953 1726915 - 1726901 - f 78 -8.5 -4.27584 | AGTGTCAATCTAAAA GGGCG TCCCC CGCCC AAGACAGCGGGGCCG TERM 954 1727043 - 1727015 - f 70 -10.2 -3.2056 | gap 1 ATGTACAGGGACTAA GCCCGC-CGCCGA GACC CCGGCCCGCGGGC CGTTGGCCCGCGTGG TERM 955 1727121 - 1727087 - f 76 -10.7 -3.28712 | gap 2 GGCCGTGGGGCAGAA GCCGGGCCGTGAGGTCC GGT GGACC-CGCGGCC-GAC GAAGATCCCGGCGGT TERM 956 1727487 - 1727461 - f 81 -9.3 -4.07568 | overlap 1727476 TGGGGCCCGTGAAAA GGGGACGGGGA ACGAG CCCCCGCGCCC GTACCGAGAACCGAC Pcal_1865 1727698 - 1728180 + | hypothetical protein TERM 957 1728943 - 1728959 + G 70 -3.6 -4.70626 | TCTTGGAGGTGCCAT CCCCCT ACAGA AGGAGG TTTTTCGAATTGTTG Pcal_1867 1728468 - 1729175 + | hypothetical protein TERM 958 1729195 - 1729178 - f 72 -8.3 -3.76224 | GTGGGAGCGATGAAA CGGGGTC TCCG GGCCCCG TGGATGCGACCCTGG TERM 959 1729461 - 1729431 - f 78 -11.1 -3.48276 | gap 1, overlap 1729417 1729432 CCGGGGCCTAGAGAA CGCTCGTGCCCCCA CCAG TGGGGGC-CGGGCA TGACAGAAAAGTTAC TERM 960 1729460 - 1729432 - f 76 -12.4 -2.68823 | gap 1, overlap 1729417 1729431 CGGGGCCTAGAGAAC GCTCGTGCCCCCA CCAG TGGGGGC-CGGGC ATGACAGAAAAGTTA TERM 961 1729488 - 1729472 - g 70 -3.7 -4.57353 | GGGCATGACAGAAAA GTTACCC TAG GAATAAC CGGCTCGTCGCGGGT Pcal_1868 1729448 - 1729675 + | hypothetical protein TERM 962 1730098 - 1730108 + F 82 -2.4 -5.38348 | opp_overlap 1730098 TGGTATTTTGTACAA CCTC TCG GCGG TTTTTTCGTATTTTT TERM 963 1730585 - 1730623 + G 78 -4.3 -5.01732 | overlap 1730587 TCTCTGTTTTTTACG CACTTCGGGGGGTCTGT GGGGG GCGGCCCCTCCGGCGAG TTTTTTGGGGAGGTT Pcal_1869 1730162 - 1731154 + | hypothetical protein TERM 964 1731951 - 1731920 - g 71 -13 -2.69468 | gap 1, overlap 1731917 CACGGGGAGAGACGA CG-TGGCGGCCGTGG TGG CCACGACCCCCAACG GAATCGTGACGTCTG Pcal_1870 1731192 - 1732991 + | hypothetical protein TERM 965 1733122 - 1733148 + G 82 -13.7 -3.21416 | TACGACGGGACTATC GCCCTCCTCGG GAGGG CTGAGGGGGGC TTCGTCCTCGCCGTG TERM 966 1733748 - 1733764 + G 83 -7.9 -4.57073 | overlap 1733750 TTTAATTGGCGACGA CGGCCTC TAC GAGGCGG TTTTTCAGCCAACTG Pcal_1871 1733014 - 1734078 + | hypothetical protein TERM 967 1734114 - 1734095 - f 70 -10.6 -2.70932 | opp_overlap 1734097 GGCTGGCGGCAATCA CTGCCGGC CTCG GCCGGCTG GTTAGACGCCGTCCT TERM 968 1734097 - 1734112 + F 73 -11.8 -2.71144 | opp_overlap 1734095 CTGGCGGCAATCACT GCCGGC CTCG GCCGGC TGGTTAGACGCCGTC TERM 969 1734285 - 1734265 - f 74 -10.4 -3.54424 | gap 1, overlap 1734266 TTTTAGCCGGGCAAA CGCGGCGGC TGTA GCCGCCG-G AGCGGCCCATCGCCG TERM 970 1734285 - 1734266 - f 70 -10.6 -2.72511 | overlap 1734265 TTTAGCCGGGCAAAC GCGGCGGC TGTA GCCGCCGG AGCGGCCCATCGCCG Pcal_1872 1734348 - 1735304 + | hypothetical protein TERM 971 1735501 - 1735489 - f 70 -10.5 -2.70932 | opp_overlap 1735497 GGTTGCTCGCAATGA GGCGG GGA CCGCC TGGCGGCTGGGGGCT TERM 972 1736016 - 1736030 + G 76 -7 -4.41716 | overlap 1735986 GTAGCGTCTCCGGCG CGGCGG CCC CCGGCG TTTATTATATCGTAT TERM 973 1736360 - 1736374 + G 74 -7.8 -4.18018 | opp_overlap 1736359 1736362, overlap 1736362 GCAGTGGAGAGGAAG TACGGC TCC GCCGTG TTTTACCTCCAGCCC TERM 974 1738628 - 1738585 - g 76 -12.5 -3.08706 | gap 3, overlap 1738608 AAGCACATGGGAATA CGTCGGCC-GCCT--CGGCGAC ATG ATCGCCGACAGGCTGGCCGCCG GCGGGGCGCTGGGGG Pcal_1873 1735556 - 1738693 + | hypothetical protein TERM 975 1738687 - 1738670 - f 77 -12.7 -2.78596 | opp_overlap 1738670 CAGCTGCTGAGGACA GGCGGCT ATCC AGCCGCC TCTTAGCCGGCCCGC TERM 976 1738670 - 1738687 + F 79 -12.7 -3.01712 | opp_overlap 1738670 CAGCTGCTGAGGACA GGCGGCT ATCC AGCCGCC TCTTAGCCGGCCCGC Pcal_1874 1738826 - 1740781 + | hypothetical protein Pcal_1875 1741634 - 1740771 - | hypothetical protein Pcal_1876 1742701 - 1741622 - | hypothetical protein Pcal_1877 1744740 - 1743538 - | AAA family ATPase TERM 977 1743611 - 1743630 + g 89 -4.2 -5.55664 | overlap 1743612 1743627 CGCGTGTCCTCTGTG TCCCATGT GACC ACGTGGGC TTTTTTTAGTCCTAG TERM 978 1743729 - 1743754 + g 70 -2.5 -4.82667 | overlap 1743733 1743736 CCCTCTCCTGGCCCA CGTAGTAGAAG TCTA CTTCTTCTCTG TTTTTGATGTAGTAG TERM 979 1743778 - 1743792 + g 72 -5.6 -4.431 | GTAGTAGATCTTCCC GCCTTC TTC GATGGC TTTTCTCAGTAGGTG Pcal_1878 1745574 - 1744960 - | phosphate uptake regulator, PhoU Pcal_1879 1746401 - 1745571 - | ABC transporter related Pcal_1880 1747412 - 1746408 - | binding-protein-dependent transport systems inner membrane component TERM 980 1747070 - 1747102 + g 71 -11.9 -3.01712 | opp_overlap 1747058, overlap 1747092 1747095 AGAGCGCGGGGCCGA TGCCGCCGGCCTCGT CGG AGGGGGTCGGCGGGA TGTTCCAAAGAAACG Pcal_1881 1748299 - 1747409 - | phosphate ABC transporter, inner membrane subunit PstC Pcal_1882 1749611 - 1748316 - | phosphate ABC transporter, periplasmic phosphate-binding protein Pcal_1883 1749756 - 1750589 + | hypothetical protein Pcal_1884 1751850 - 1750546 - | amidophosphoribosyltransferase TERM 981 1751005 - 1751018 + g 72 -4.5 -4.56775 | gap 1, opp_overlap 1751002, overlap 1751007 CGATATGAATATGCG GCCTGC AAA GC-GGC TTTTTACCACCGCCT TERM 982 1751054 - 1751073 + g 85 -15 -3.02263 | AGCGGCTTCCCCAGG GCCGAGGC GTAC GCCTCGGC TATTACGCGCGCTGT Pcal_1885 1753933 - 1751852 - | phosphoribosylformylglycinamidine synthase II Pcal_1886 1754055 - 1754309 + | hypothetical protein Pcal_1887 1754306 - 1754947 + | phosphoribosylformylglycinamidine synthase I Pcal_1888 1755870 - 1754944 - | hypothetical protein TERM 983 1755772 - 1755748 - G 80 -10.7 -4.01158 | opp_overlap 1755748 1755754, overlap 1755757 AAGTGTAGCAAATAA GGCGAAAAGGC TTG GCCTCTTCTCC ATAAGCGGAGCCGCG Pcal_1889 1756692 - 1755988 - | HAD family hydrolase Pcal_1890 1757314 - 1756712 - | TenA family transcription regulator Pcal_1891 1758686 - 1757502 - | phosphoribosylaminoimidazole carboxylase Pcal_1892 1758737 - 1759216 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Pcal_1893 1760338 - 1759193 - | amidophosphoribosyltransferase Pcal_1894 1761785 - 1760340 - | phosphoribosylamine--glycine ligase TERM 984 1762419 - 1762458 + G 81 -15 -2.55253 | overlap 1762411 TTGAGTTTGGGCGCG TCGGCGGAGAGCTCGTCC TCGT GGACGAGGTGTCCGGCGA TACATTCCGCTTGCT Pcal_1895 1761875 - 1762597 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Pcal_1896 1762856 - 1763689 + | phosphoribosylglycinamide formyltransferase Pcal_1897 1763686 - 1764612 + | methenyltetrahydrofolate cyclohydrolase Pcal_1898 1764632 - 1765486 + | hypothetical protein TERM 985 1766389 - 1766375 - g 71 -11.4 -3.21593 | overlap 1766373 GACGCCTTGAGAAGA GCCGAG GAC CTCGGC CTAAGGGCTAGGGTC Pcal_1899 1765532 - 1766461 + | phosphoribosylaminoimidazole synthetase Pcal_1900 1767216 - 1766464 - | hypothetical protein Pcal_1901 1768493 - 1767213 - | peptidase U62, modulator of DNA gyrase Pcal_1902 1769863 - 1768490 - | peptidase U62, modulator of DNA gyrase TERM 986 1769843 - 1769827 - G 75 -10.1 -3.6502 | opp_overlap 1769826 TAGCGCCCAGGGAAA GGCCGTA CTC CACGGCC CTCCTTAACAACTCT Pcal_1903 1770649 - 1769885 - | hypothetical protein Pcal_1904 1771385 - 1770657 - | hypothetical protein TERM 987 1770809 - 1770777 - G 78 -9.9 -4.0942 | overlap 1770779 1770807 GAGGGAGTACATAAA GAGTCTCTCTCTTTG TAG CAAGGAGAGAAACAC GGCCACGGGCAGAAG TERM 988 1770807 - 1770779 - G 78 -11.1 -3.6393 | overlap 1770777 GGGAGTACATAAAGA GTCTCTCTCTTTG TAG CAAGGAGAGAAAC ACGGCCACGGGCAGA Pcal_1905 1772301 - 1771390 - | nitrate reductase subunit Pcal_1906 1773719 - 1772298 - | respiratory nitrate reductase beta subunit Pcal_1907 1777534 - 1773716 - | nitrate reductase, alpha subunit TERM 989 1777667 - 1777653 - R 74 -2.8 -4.93696 | opp_overlap 1777655 1777655, overlap 1777646 GGGAAAGAGGAAAAA TCGG GGTTTTT CCGA CGAATCCCCTTTTTA Pcal_1908 1779842 - 1777680 - | nitric oxide reductase, cytochrome b subunit TERM 990 1777849 - 1777835 - G 75 -5.6 -4.56597 | overlap 1777836 CGTCTGGGGCAAAAA TGGCCT TAG AGGCCC AGTAGCCCCACTGCG Pcal_1909 1779924 - 1780463 + | nitrate reductase molybdenum cofactor assembly chaperone Pcal_1910 1780713 - 1780456 - | hypothetical protein Pcal_1911 1781035 - 1780706 - | hypothetical protein TERM 991 1781014 - 1780981 - G 71 -10.9 -3.25073 | gap 1, overlap 1780979 1780982 GCGCGAACACCAACA CGGCCGCCGGCACGGC GAT GCCA-GCCGTCAGCCA GGCAAGGACTGTGGG Pcal_1912 1782270 - 1781038 - | cytochrome b/b6 domain-containing protein TERM 992 1781373 - 1781336 - G 74 -12.8 -2.87944 | TAGTACCACATGACA GGCCAAGGCG-GCCGCAC ACCC GT-CGGCACTCCTTGGCC AGGCGCCCAGGGCTC Pcal_1913 1782821 - 1782267 - | Rieske (2Fe-2S) domain-containing protein Pcal_1914 1783401 - 1782823 - | hypothetical protein TERM 993 1783212 - 1783193 - G 71 -12.8 -2.64561 | opp_overlap 1783191, overlap 1783192 1783188 TTGTAAGAAACAGAC GGCCCACC CGCA GGCGGGCC CGATGTCTGAGTCTG Pcal_1915 1785649 - 1783493 - | cytochrome c assembly protein TERM 994 1784570 - 1784552 - G 74 -13.8 -2.62184 | overlap 1784537 1784538 GGCTGGCCTATACCA CGCCGCCA GCG CGGCGGCG GCCGCTGGCCAGAGG TERM 995 1784786 - 1784773 - G 78 -3.7 -4.96848 | overlap 1784774 1784775 TTGCGTATATAAAAA CGCCG GCCC CGGCC ATGCCCAAGGCGGTT TERM 996 1784980 - 1784996 + g 81 -4.3 -5.1287 | overlap 1784962 GGACGCCCGCCGTAG CGATGCG CCC CCCGTCG TTTTTTAAGTGTAGC TERM 997 1785371 - 1785344 - G 72 -9.8 -3.66844 | overlap 1785346 GGCATATGCCAACAA GAGGGCCGCC GCGGCGTG GGCGGCCCTG CTCCGCAGACCTCCC TERM 998 1785369 - 1785346 - G 76 -12.4 -3.41325 | overlap 1785344 CATATGCCAACAAGA GGGCCGCC GCGGCGTG GGCGGCCC TGCTCCGCAGACCTC TERM 999 1785677 - 1785662 - R 77 -11.8 -3.25223 | CATTTATACGAGGAA GGCGGC GAGT GCCGCC AGGACTGCCAGCTCG Pcal_1916 1785970 - 1785650 - | hypothetical protein Pcal_1917 1786499 - 1785960 - | hemerythrin HHE cation binding domain-containing protein TERM 1000 1786270 - 1786293 + g 71 -10.2 -3.55444 | gap 1 ACCTGTATTGGGCCG CCGGTCAGGGG GAA CCCC-GCCCGG TTTGCCCCCTGGAAG Pcal_1918 1787240 - 1786518 - | hypothetical protein TERM 1001 1787143 - 1787129 - G 70 -2.7 -4.8143 | overlap 1787130 CGAAGAACGCAAAAA CGGCG AGGAG CGCCC TCCACCAGTCGGAGG Pcal_1919 1787709 - 1787263 - | hypothetical protein Pcal_1920 1788343 - 1787741 - | hypothetical protein Pcal_1921 1788428 - 1790053 + | cytochrome d1, heme region Pcal_1922 1790524 - 1790069 - | bacterio-opsin activator TERM 1002 1790622 - 1790652 + H 76 -7.7 -4.15508 | opp_overlap 1790621, overlap 1790625 AAAAATTGCACAATT GTCTTCTGGTTAA CTAAA TTAACCAGAATGC TTTTAGGCGTTGCTT ubiA 1790680 - 1791519 + | prenyltransferase Pcal_1924 1791974 - 1791516 - | bacterio-opsin activator Pcal_1925 1793060 - 1792092 - | hypothetical protein Pcal_1926 1794182 - 1793070 - | putative uncharacterized protein involved in response to NO TERM 1003 1793595 - 1793565 - G 70 -3.9 -4.62069 | gap 1, overlap 1793586 1793591 GGCCCATGTGAAAAA CGCCG-CGGCTATG AGGG CAAAGGCAACGGCG TTGCCCCACCCCCTG TERM 1004 1793600 - 1793586 - G 71 -10 -3.62096 | opp_overlap 1793599, overlap 1793565 1793591 GGCTATGAGGGCAAA GGCAAC GGC GTTGCC CCACCCCCTGGCGGG Pcal_1927 1794705 - 1794274 - | bacterio-opsin activator TERM 1005 1795942 - 1795925 - g 85 -9.9 -4.45577 | opp_overlap 1795927 ATAAACGGCATAAAA GTCCTCT CCCT AGAGGAC GCGATTAAGGAGGGG Pcal_1928 1794959 - 1796980 + | nitrous-oxide reductase Pcal_1929 1796959 - 1797441 + | hypothetical protein Pcal_1930 1797438 - 1797992 + | hypothetical protein Pcal_1931 1797992 - 1799260 + | nitrous oxidase accessory protein-like protein Pcal_1932 1799241 - 1799870 + | ABC transporter related Pcal_1933 1799864 - 1800649 + | hypothetical protein Pcal_1934 1800678 - 1801835 + | major facilitator transporter Pcal_1935 1802344 - 1801997 - | hypothetical protein Pcal_1936 1803084 - 1802341 - | hypothetical protein TERM 1006 1803001 - 1802983 - G 71 -10.2 -3.53224 | overlap 1802994 TATTGCTGCGGCAAA GGCGTAGC CAA GCGACGCC GCCGCCACGCTCGCC Pcal_1937 1803694 - 1803068 - | ABC transporter related Pcal_1938 1804800 - 1803691 - | parallel beta-helix repeat-containing protein Pcal_1939 1805398 - 1804814 - | hypothetical protein TERM 1007 1805490 - 1805469 - R 77 -10.1 -3.6579 | AACCTAGTGGAACAA CCCGCCG AGAGAAAG CGGCGGG GCGTACCAGGGCAAA Pcal_1940 1806238 - 1805546 - | hypothetical protein Pcal_1941 1806905 - 1806321 - | methyltransferase type 11 Pcal_1942 1807502 - 1806996 - | putative respiratory chain protein TERM 1008 1807220 - 1807190 - G 77 -11.9 -3.49102 | gap 1 ATATGCCCCAGAGAA GCGCCACTA-AGGC CAAG GCCTCCAGCGGCGC CCTCCTAAAGAGGAG TERM 1009 1807600 - 1807564 - R 72 -8.7 -3.77119 | gap 1 GAGGAAGGAAGAGAA CAGCGGCGCGTCGAAC TGCCCC GCCC-ACGCGGCGCTG GCGGCGACCCACAGT Pcal_1943 1810066 - 1807670 - | cytochrome-c oxidase Pcal_1944 1810573 - 1810124 - | cytochrome c oxidase, subunit II Pcal_1945 1810799 - 1810551 - | respiratory chain protein ubiA 1811688 - 1810849 - | prenyltransferase TERM 1010 1811386 - 1811364 - G 76 -3.2 -4.93296 | CCAGCACGACAAAAA GCGTCGGGAG AGG CCCCAGCCAC GCGAGGCTGAGCAAG Pcal_1947 1812308 - 1811751 - | hypothetical protein Pcal_1948 1813151 - 1812405 - | electron transport protein SCO1/SenC Pcal_1949 1814864 - 1813182 - | cytochrome-c oxidase Pcal_1950 1815376 - 1814900 - | cytochrome c oxidase, subunit II TERM 1011 1815717 - 1815738 + G 90 -10.1 -4.70879 | GCTCCTCTTGGCCTT GGCCGCC TTCGCGCT GGCGGCC TTTTTAGCGTTTGCA Pcal_1951 1815682 - 1816107 + | hypothetical protein TERM 1012 1816107 - 1816126 + G 87 -7.8 -4.83615 | opp_overlap 1816107 CGTCCATGTACATTA GGCCGCTT GCAA AAGCCGCC TTTTTCTCCGCAGTG Pcal_1952 1816097 - 1816930 + | putative respiratory chain protein Pcal_1953 1816930 - 1818981 + | cytochrome c assembly protein Pcal_1954 1819315 - 1818953 - | hypothetical protein TERM 1013 1822809 - 1822793 - g 70 -12.3 -2.71712 | opp_overlap 1822776 1822793, overlap 1822792 1822795 CGTGGTGCTTGAAAG TAGGCGC GAG GCGCCTA TTCTCAACGTGAGGC TERM 1014 1822793 - 1822809 + G 75 -12.3 -3.31144 | opp_overlap 1822793 1822792 1822795, overlap 1822776 CGTGGTGCTTGAAAG TAGGCGC GAG GCGCCTA TTCTCAACGTGAGGC Pcal_1955 1822116 - 1823393 + | major facilitator transporter Pcal_1956 1823915 - 1823382 - | NADH dehydrogenase (ubiquinone), 30 kDa subunit Pcal_1957 1824495 - 1823917 - | NADH-quinone oxidoreductase, B subunit TERM 1015 1824585 - 1824571 - R 70 -3.5 -4.63932 | GAGCCGTGAAGAAAA GCCCT ACACG AGGAC TTCTCACTCGGCCAG Pcal_1958 1824993 - 1824589 - | hypothetical protein TERM 1016 1824740 - 1824765 + g 71 -6.8 -4.24204 | gap 1 TTGGCAGCGATGGTC GACG-CGAGGC CTACC GCCTCGTCGAC TTTTAGCTCTAGGTC Pcal_1959 1825037 - 1825768 + | hypothetical protein Pcal_1960 1826257 - 1826562 + | hypothetical protein Pcal_1961 1826640 - 1827008 + | hypothetical protein Pcal_1962 1827718 - 1827359 - | hypothetical protein Pcal_1963 1828503 - 1827763 - | NAD-dependent deacetylase TERM 1017 1828511 - 1828522 + r 77 -5.8 -4.68593 | opp_overlap 1828510 ACATCCATATAAACC CGTG CGTC CACG TTTTTAAGTGATGAC TERM 1018 1830305 - 1830319 + r 77 -2.8 -5.05782 | TAGTGTACGCCTCTA GACG ATGACCA CGTC TTTTTTGACCTCCCT Pcal_1965 1830604 - 1830302 - | hypothetical protein TERM 1019 1830696 - 1830668 - H 95 -13.7 -3.322 | opp_overlap 1830675, overlap 1830670 ATGTGCATATATTAA GAGCCGCCGAGCG CAT CGCCGGGCGGCGC GCCGTCGTTGGAAAG TERM 1020 1830694 - 1830670 - H 95 -14.9 -3.22777 | opp_overlap 1830675, overlap 1830668 GTGCATATATTAAGA GCCGCCGAGCG CAT CGCCGGGCGGC GCGCCGTCGTTGGAA Pcal_1966 1830747 - 1831289 + | hypothetical protein Pcal_1967 1831286 - 1832044 + | resolvase domain-containing protein TERM 1021 1832052 - 1832035 - T 86 -10.5 -3.90318 | CGAGGAGGTGAGAAA GGCGGAC TGAC GCCCGCC CCCAGCGGCGGAGCT TERM 1022 1832060 - 1832076 + T 70 -3.5 -4.70772 | overlap 1832065 1832067 CGCCCGCCCCCAGCG GCGGAGC TAG GCGACGC TTTTGTTGCCTATCT Pcal_1968 1832278 - 1832066 - | hypothetical protein TERM 1023 1832133 - 1832151 + g 71 -10.3 -3.53761 | overlap 1832121 ACCGCGTGGTACACC GCCTCGA CGTCT TCGAGGC TTTGCACCAGCCTTA Pcal_1969 1832346 - 1833044 + | hypothetical protein Pcal_1970 1833214 - 1833041 - | hypothetical protein Pcal_1971 1833296 - 1834372 + | nucleotidyl transferase TERM 1024 1834369 - 1834355 - T 73 -11.4 -2.81208 | overlap 1834352 1834354 GCCGACGTAAAAGAG GGGGAG GTC CTCCCC TGACAATCCCTGGTC Pcal_1972 1835231 - 1834503 - | photosystem I assembly BtpA TERM 1025 1834962 - 1834950 - G 72 -9.1 -3.89346 | opp_overlap 1834950 1834941 1834939 GTTGCAGCGGATAAA CGTGG CGC CCACG TGTCTCGCTATTATT Pcal_1973 1835269 - 1835445 + | hypothetical protein TERM 1026 1835437 - 1835449 + F 81 -4.7 -5.04597 | GTGACCCCCCTTGAG CCCGC ATA GCGTG TTTTTGTCTATAACT Pcal_1974 1835447 - 1835863 + | hypothetical protein Pcal_1975 1836359 - 1836000 - | hypothetical protein Pcal_1976 1837230 - 1836343 - | peptidase M48, Ste24p TERM 1027 1836779 - 1836753 - G 79 -13.7 -3.02263 | overlap 1836771 1836774 AGAGGCGGGCGAAGA GGCCTGTGGTG AAGTA CACCACTGGCC CCTTGGGCCCGTCGA Pcal_1977 1837636 - 1837262 - | hypothetical protein TERM 1028 1837677 - 1837693 + r 90 -6.6 -5.11613 | TTGCACACACTCTCT CAAGGT ATTCC ACCTTG TTTTTTAAGTCGTAT Pcal_1978 1838699 - 1837818 - | AAA ATPase TERM 1029 1838013 - 1837997 - G 70 -4.3 -4.56597 | TCGCGCTCTCAAAAA CGAGGTA CCG CACCACG TCGCCCCGCTTCAAC Pcal_1979 1839915 - 1838719 - | helicase c2 TERM 1030 1839332 - 1839294 - G 78 -6.7 -4.7078 | gap 1, overlap 1839315 GGAAGTATGTAAAAA TGTCGGCGAAGTGCCTAA CTAC TGAGGCGCTT-GCCGCCA TCAGCCTAGGAGCTC TERM 1031 1839585 - 1839545 - G 93 -13.9 -3.86897 | overlap 1839547 CCCACCTTGGATAAA TAGGCCAGGGGAAGCACGG CCA CCCTCCTGCCCCTGGCCGA GGCGTGGAAAAACTC TERM 1032 1839583 - 1839547 - G 91 -16.5 -3.5241 | overlap 1839545 CACCTTGGATAAATA GGCCAGGGGAAGCACGG CCA CCCTCCTGCCCCTGGCC GAGGCGTGGAAAAAC Pcal_1980 1840281 - 1839916 - | hypothetical protein Pcal_1981 1841034 - 1840282 - | 5'-nucleotidase / 3'-nucleotidase / exopolyphosphatase Pcal_1982 1841819 - 1841031 - | hypothetical protein TERM 1033 1842032 - 1842055 + H 88 -5.4 -5.252 | gap 1 CGTGGGAGGCCTCTG CAGTG-ACTGT TAT ATAGTCCACTG TTTTTTGTACCCATG Pcal_1983 1842068 - 1842427 + | NADH dehydrogenase subunit A Pcal_1984 1844019 - 1842424 - | CTP synthetase TERM 1034 1844063 - 1844047 - H 70 -3.7 -4.59773 | overlap 1844048 TCCCAGCTTTAAAAA GCTTACA CTT TGTAAGA CGTGGCCGATGACTT TERM 1035 1844640 - 1844627 - g 70 -2.3 -4.87133 | AGCGGGCAAAGAAAA TCGCG GAAG CGCTA GACGCCGTAGTCGAC TERM 1036 1844740 - 1844730 - g 84 -6.8 -4.82901 | overlap 1844731 1844733 TCCTGTGTACAAAAA GGAC GTA GTCC TCTACGTGGCCATAA Pcal_1985 1844065 - 1845036 + | hypothetical protein TERM 1037 1845155 - 1845166 + T 75 -7.2 -4.32857 | opp_overlap 1845131 1845153, overlap 1845165 TGAAGCTACATCACG CGCG TAGA CGCG TTTGTGTTTAAAACG Pcal_1986 1845734 - 1845174 - | phosphoribosyltransferase TERM 1038 1845362 - 1845390 + g 100 -8.8 -5.00616 | TGACCGCGGTTTTCA CCTCCGCGGC GCCCAGCAG GCCGAGGAGG TTTTTTACGAGGGCA TERM 1039 1845621 - 1845639 + g 73 -11.7 -3.02187 | GACGGCGACTATCAC CTCGGGC CTATA GCCCGAG TCTCGTATTTTGCCT Pcal_1987 1845980 - 1846489 + | histidine triad (HIT) protein Pcal_1988 1846588 - 1847631 + | hypothetical protein Pcal_1989 1847628 - 1847969 + | PilT domain-containing protein Pcal_1990 1848012 - 1848596 + | DNA-directed RNA polymerase subunit E' Pcal_1991 1848593 - 1848814 + | DNA-directed RNA polymerase subunit E, RpoE2 Pcal_1992 1849176 - 1848787 - | hypothetical protein TERM 1040 1851710 - 1851679 - g 79 -13.8 -3.0263 | gap 1 AGGAGCTCGCCAAGA GGGTTGCCCTCTTGG CCA CCAAGAGGG-ACCCC GACCTAGTCCTAGTG alaS 1849206 - 1851896 + | alanyl-tRNA synthetase nac 1851893 - 1852261 + | nascent polypeptide-associated complex protein rpl10e 1852290 - 1852826 + | 50S ribosomal protein L10e Pcal_1996 1852807 - 1853541 + | hypothetical protein Pcal_1997 1854251 - 1853655 - | hypothetical protein Pcal_1998 1854376 - 1855200 + | hypothetical protein TERM 1041 1855541 - 1855524 - g 90 -8.3 -4.91109 | opp_overlap 1855537 1855538, overlap 1855509 1855526 CTTCGACGAGAAAAA CTCGCCG CTGA CGGCGGG GAACATCACCGATTT Pcal_1999 1855321 - 1856463 + | hypothetical protein rpl5p 1856504 - 1857040 + | 50S ribosomal protein L5P TERM 1042 1857656 - 1857645 - g 70 -3.6 -4.56597 | GGTGCTTGTGAAAAA GGCC AGCA AGCC CATCCAGTACCTCTC Pcal_2001 1857040 - 1858287 + | Fmu (Sun) domain-containing protein Pcal_2002 1859437 - 1858277 - | hypothetical protein Pcal_2003 1859551 - 1860996 + | hypothetical protein Pcal_2004 1862364 - 1861018 - | hypothetical protein TERM 1043 1861492 - 1861470 - G 93 -12.6 -4.11216 | GTGCTAGGGCGAAAA CCGTGCCGGG GGA CCCGACCCGG GGGAGGCCCATGGCC Pcal_2005 1862636 - 1862361 - | hypothetical protein Pcal_2006 1862661 - 1863497 + | electron transfer flavoprotein beta-subunit TERM 1044 1863853 - 1863841 - g 77 -10.5 -3.90744 | opp_overlap 1863849 CGTGTTTGGAAACAA GGCGG TGG CCGCC GTAGAGTCGCCGACG Pcal_2007 1863494 - 1864390 + | electron transfer flavoprotein, alpha subunit Pcal_2008 1864998 - 1864387 - | proteasome endopeptidase complex Pcal_2009 1865071 - 1866114 + | RNA 3'-terminal-phosphate cyclase Pcal_2010 1867157 - 1866111 - | small GTP-binding protein Pcal_2011 1867971 - 1867459 - | hypothetical protein Pcal_2012 1868384 - 1868070 - | hypothetical protein Pcal_2013 1868475 - 1869284 + | hypothetical protein Pcal_2014 1870245 - 1869685 - | PaREP1 domain-containing protein Pcal_2015 1870945 - 1870298 - | hypothetical protein TERM 1045 1870367 - 1870377 + g 71 -8.2 -4.03413 | overlap 1870363 GTTCCACGCCGTGGA GGGG GCT CCCC TTTGTATGGAGAACT TERM 1046 1870901 - 1870918 + g 70 -4.7 -4.43208 | overlap 1870913 GAGGAGGAGGACGGC GGCGAGG AGCC TCACGCC TTTCTTTGCGCGTGT Pcal_2016 1870960 - 1871880 + | NAD-dependent epimerase/dehydratase Pcal_2017 1871877 - 1872203 + | hypothetical protein Pcal_2018 1873061 - 1872189 - | PP-loop domain-containing protein TERM 1047 1872614 - 1872630 + g 79 -13.7 -3.14132 | AGAAGTCGTACATGT GGTGGCC CGT GGCCACC TTGGTGGCGCCGAGC TERM 1048 1873011 - 1872968 - G 71 -11 -3.31144 | gap 1, overlap 1872993 CCCCCATTTCCACAA GCCTATACCGGCGGATAGTCT CAA AGACCCGCCGCCGGTAC-GAC CCCAAGTCAACCCCC TERM 1049 1873459 - 1873444 - g 70 -4.6 -4.46112 | opp_overlap 1873448 1873452 GCTGAGGGAAATAAA CGCCGC GTGG GCAACG CTCTTCCTCGCCTCA Pcal_2019 1873103 - 1873585 + | hypothetical protein Pcal_2020 1874946 - 1873582 - | tryptophan synthase subunit beta Pcal_2021 1874993 - 1875514 + | hypothetical protein TERM 1050 1876250 - 1876210 - g 75 -5.2 -4.59109 | gap 1, overlap 1876211 1876232 GAGACTGTCCAAAAA GCCGCCGCAGAG-CTCGGC AAAA GCCCAGGCGCCGCCGCGGG CACAGGCATAGTCCT TERM 1051 1876251 - 1876232 - g 71 -7.8 -4.09243 | gap 1, overlap 1876211 1876210 CAGAGCTCGGCAAAA GCCCA-GGC GCC GCCGCGGGC ACAGGCATAGTCCTC Pcal_2022 1875520 - 1876542 + | zinc finger, RanBP2-type Pcal_2023 1876727 - 1878880 + | hypothetical protein Pcal_2024 1878868 - 1879401 + | hypothetical protein Pcal_2025 1879528 - 1879827 + | hypothetical protein Pcal_2026 1880767 - 1879922 - | zinc finger TFIIB-type domain-containing protein TERM 1052 1880101 - 1880052 - G 100 -19.9 -3.49475 | overlap 1880092 GGCAGGCCCACATAA GCCGCCGCCATTGCGCCAAGCGC CGCG GCGCCGGCCACAACGGCCGCGGC CATCCCCAGCGCCTC Pcal_2027 1881783 - 1880764 - | hypothetical protein Pcal_2028 1882081 - 1882467 + | dinitrogenase iron-molybdenum cofactor biosynthesis TERM 1053 1882831 - 1882850 + T 74 -7.8 -4.05446 | GAAGTACATACTTGC TCTACCGC AACG GCGGAAGA TTTGTAATTGGGAAA TERM 1054 1883022 - 1882996 - T 70 -3.6 -4.62872 | opp_overlap 1883003 1883012, overlap 1883003 AGCAATGTGGAAAAA GACAAAAGAGGC GAG GCCTGTGATGTC CACAGGTGATGTGGA TERM 1055 1883015 - 1883003 - T 74 -3.3 -4.98672 | opp_overlap 1883003 1883012, overlap 1882996 TGGAAAAAGACAAAA GAGGC GAG GCCTG TGATGTCCACAGGTG TERM 1056 1883241 - 1883251 + T 77 -8.2 -4.08767 | overlap 1883240 GTAGGGGACTCTCAG GGGG TTC CCCC TTTTGAACCCCTGGC Pcal_2029 1884015 - 1883377 - | zinc finger SWIM domain-containing protein Pcal_2030 1884731 - 1884015 - | nuclease TERM 1057 1884194 - 1884232 + g 74 -11 -3.57406 | opp_overlap 1884185, overlap 1884191 1884196 TAACCACCACTGTAT CTGTCACAGTTTTGGTGA CCG TCACCGTGGCTGTGACTG TGTTTGTGGTCGCCA TERM 1058 1884196 - 1884230 + g 76 -12.2 -3.36228 | opp_overlap 1884185, overlap 1884194 1884191 ACCACCACTGTATCT GTCACAGTTTTGGTGA CCG TCACCGTGGCTGTGAC TGTGTTTGTGGTCGC TERM 1059 1884528 - 1884504 - G 77 -13.5 -2.88544 | overlap 1884486 1884506 GTCTATGTCTAGACA GACCCGCCTCC CCA GGAGGAGGGCC TCAAGCGCCGCCTTG TERM 1060 1884526 - 1884506 - G 74 -12.5 -2.99471 | overlap 1884504 CTATGTCTAGACAGA CCCGCCTCC CCA GGAGGAGGG CCTCAAGCGCCGCCT Pcal_2031 1885694 - 1884750 - | Rad51-like protein Pcal_2032 1886289 - 1885876 - | PaREP1/PaREP8 domain-contain protein purP 1887397 - 1886357 - | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein Pcal_2034 1887452 - 1888627 + | glutamyl-tRNA reductase Pcal_2035 1889573 - 1888659 - | glycosyl transferase family protein TERM 1061 1890178 - 1890218 + G 74 -7.6 -4.13728 | AAGCCGGCGTTTAGG GGTGCTCTCCTCAC CTTATTCCGCCTC GTGAGGGGGGCGCC TTTTCAGACTCTGTC Pcal_2036 1889629 - 1891023 + | hypothetical protein Pcal_2037 1892196 - 1891006 - | glycosyl transferase, group 1 TERM 1062 1891352 - 1891370 + g 85 -10.2 -4.36914 | overlap 1891353 TTGGGGATTAGGCGG ACGGCGTG TGC CACGCCGC TTTTCTCAGCCAGCC TERM 1063 1891353 - 1891369 + g 82 -13.7 -3.21934 | overlap 1891352 TGGGGATTAGGCGGA CGGCGTG TGC CACGCCG CTTTTCTCAGCCAGC Pcal_2038 1892741 - 1892217 - | hypothetical protein TERM 1064 1892462 - 1892496 + g 73 -3.4 -4.8269 | opp_overlap 1892462 CTGCCACCACAGAGA GCACGTAGTCGATGGC CCC GACATTGAGCACGGGC TTTTTAATCCTTATG TERM 1065 1893056 - 1893014 - R 73 -11.3 -2.68312 | gap 1, opp_overlap 1893021 1893029, overlap 1893013 AAAAACATCGATAAG CCCGTCA-GGCCGGCGGCCT TTCA AAGCCACCGGCATTGACAAG ACTCTATACTCTAAA Pcal_2039 1893538 - 1893152 - | hypothetical protein Pcal_2040 1893980 - 1895326 + | hypothetical protein Pcal_2041 1895567 - 1895292 - | hypothetical protein Pcal_2042 1896226 - 1895594 - | cyclase family protein TERM 1066 1896412 - 1896370 - H 95 -13.9 -3.28712 | GGGGCGCGGGGATAA GCCGGCGGCGCTGGACGGG TTCGC CCCGCCTGGCGCTGTCGGC GAAATCGGCGCCGAC Pcal_2043 1896486 - 1897511 + | hypothetical protein TERM 1067 1897747 - 1897757 + T 77 -8.2 -4.07885 | overlap 1897732 1897737 CCGCCGGGACTCCCA GGGG TTT CCCC TTTTGAACCCGGGTC Pcal_2044 1898297 - 1897995 - | hypothetical protein Pcal_2045 1899514 - 1898294 - | NADH dehydrogenase (ubiquinone) Pcal_2046 1899941 - 1899504 - | NADH-quinone oxidoreductase, B subunit Pcal_2047 1900382 - 1900032 - | hypothetical protein Pcal_2048 1901353 - 1900379 - | respiratory-chain NADH dehydrogenase, subunit 1 Pcal_2049 1901748 - 1901350 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pcal_2050 1902740 - 1901745 - | pyruvate ferredoxin oxidoreductase, beta subunit Pcal_2051 1904016 - 1902808 - | pyruvate ferredoxin oxidoreductase, alpha subunit TERM 1068 1902957 - 1903006 + g 77 -11.9 -3.49182 | overlap 1902953 1902958 1902960 ACACGGGCTTGTGCA ACGTGGCGGCCACCTCCACCGCC ATGG GGCCCTGGAGCGGGCCGCCGTGG TTAATTGTCCTGTCT TERM 1069 1902958 - 1903005 + g 81 -15.4 -2.68786 | overlap 1902957 1902953 1902960 CACGGGCTTGTGCAA CGTGGCGGCCACCTCCACCGCC ATGG GGCCCTGGAGCGGGCCGCCGTG GTTAATTGTCCTGTC TERM 1070 1902960 - 1903003 + g 82 -14.4 -2.87988 | overlap 1902958 1902957 1902953 CGGGCTTGTGCAACG TGGCGGCCACCTCCACCGCC ATGG GGCCCTGGAGCGGGCCGCCG TGGTTAATTGTCCTG TERM 1071 1903134 - 1903144 + g 72 -4.6 -4.56597 | overlap 1903117 CCTCTGAGCGCAACC GGTC GAC GGCC TTTTTCACAAGCCCA TERM 1072 1903422 - 1903459 + g 71 -12.7 -2.57132 | gap 1, overlap 1903421 1903425 ACCTTATCACCTCCT CCTCGTCCTCTGGCACGT CGA GCG-GCTGGAGGACGTGG CTTGTCCAAAAGCCG Pcal_2052 1904951 - 1904013 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Pcal_2053 1906154 - 1905033 - | NADH/ubiquinone/plastoquinone (complex I) TERM 1073 1905924 - 1905905 - G 81 -8.6 -4.30576 | gap 1, opp_overlap 1905922 TGGCTATGAGCAAAA CGCCGGTGT ACG ACACC-GCG GCGGCCATGCCGGCC Pcal_2054 1907776 - 1906145 - | NADH/ubiquinone/plastoquinone (complex I) Pcal_2055 1909074 - 1907764 - | NADH/ubiquinone/plastoquinone (complex I) Pcal_2056 1909704 - 1909300 - | hypothetical protein TERM 1074 1910349 - 1910330 - g 71 -12.8 -2.62184 | overlap 1910316 GGCCCTGCTAGAGGA CGCCGGGC TTGA GCCCGACG AGAAGAAAGCCGGCG Pcal_2057 1909815 - 1911728 + | aldehyde ferredoxin oxidoreductase Pcal_2058 1911763 - 1912494 + | ATP-NAD/AcoX kinase Pcal_2059 1912491 - 1912841 + | PilT domain-containing protein Pcal_2060 1913506 - 1912814 - | phosphatidate cytidylyltransferase Pcal_2061 1913995 - 1913525 - | hypothetical protein TERM 1075 1914201 - 1914218 + G 84 -6.9 -4.83615 | TAGATCTGCAACGCG CCGGGGT GAGG ACCACGG TTTTTCTAGCAGATA TERM 1076 1914686 - 1914664 - g 74 -11.2 -3.54382 | overlap 1914660 CGGCAAGAGAATTAA GCCAGTGGCG CTT CACCACAGGC TACTCCCAGCTCTCA TERM 1077 1915030 - 1915018 - g 75 -10.5 -3.70902 | opp_overlap 1915022 CCCGGCAGACTTAAA GGCCG TGA CGGCC GAGGCCTTGGCCGCG Pcal_2062 1914011 - 1915129 + | tyrosyl-tRNA synthetase Pcal_2063 1916182 - 1915091 - | hypothetical protein TERM 1078 1915684 - 1915695 + g 70 -3.6 -4.67011 | overlap 1915677 CGGTGATGCCGGGGA GCTC AGCC GGGC TTTTTACGTCCACTT TERM 1079 1917495 - 1917513 + G 77 -10.2 -3.89614 | opp_overlap 1917489 1917486, overlap 1917492 1917503 AGTCAACGAGGCGTG GAGGAGGG CCC CCCACCTC TTTGTGCACGTTAGG Pcal_2064 1916209 - 1917624 + | metal dependent phosphohydrolase Pcal_2065 1917912 - 1917616 - | hypothetical protein Pcal_2066 1918013 - 1918840 + | hypothetical protein Pcal_2067 1919874 - 1918837 - | peptidase M24 Pcal_2068 1920254 - 1919877 - | hypothetical protein Pcal_2069 1920295 - 1920786 + | hypothetical protein TERM 1080 1920929 - 1920905 - g 76 -12.2 -3.35046 | overlap 1920903 GGAGCTCGTGAAAGA GGACTTGCCC GAGGT GGACAAGTCC ATCCTAAAGCTACTG Pcal_2070 1920780 - 1921124 + | transcriptional regulator, TrmB Pcal_2071 1921596 - 1921099 - | hypothetical protein TERM 1081 1921917 - 1921892 - g 71 -8.1 -4.06904 | opp_overlap 1921891 1921888, overlap 1921885 1921893 GTACTTAAGCAGAAA CGCCGCGGCGG CAAG CGGCTACGGCG ATGTCATTTTTCTAC Pcal_2072 1921740 - 1922237 + | hypothetical protein Pcal_2073 1922788 - 1922216 - | hypothetical protein Pcal_2074 1922820 - 1923698 + | alpha-L-glutamate ligase Pcal_2075 1924583 - 1923912 - | hypothetical protein Pcal_2076 1924629 - 1925213 + | phage SPO1 DNA polymerase-related protein TERM 1082 1925235 - 1925245 + F 70 -6.8 -4.05033 | TAATAGGTGTAGTAT GTCC CGT GGAC TTTCTGTGCGCTAGG Pcal_2077 1925240 - 1926127 + | hypothetical protein Pcal_2078 1926124 - 1927731 + | hypothetical protein TERM 1083 1928141 - 1928125 - g 78 -8.7 -4.12942 | TCAAAGTTCGCAAAA GAGGGAA AAG TCCCCTC AATCCTAATGCTGTA Pcal_2079 1927762 - 1928229 + | hypothetical protein Pcal_2080 1929188 - 1928355 - | methyltransferase TERM 1084 1928645 - 1928664 + g 87 -9.2 -4.7153 | opp_overlap 1928624 1928625 CAACTGTCGCAACGT CGCCGTGG ATGC CCACCGCG TTTTTCACCTTGTTT TERM 1085 1928880 - 1928892 + g 75 -9.1 -4.08706 | opp_overlap 1928871 GGAGAAGTAGACCTT GGTGG GGT CCACC TTTATGTAGTACCCG TERM 1086 1930061 - 1930083 + G 75 -12 -3.28712 | opp_overlap 1930039 1930037 CCTCCTCAGGCTGGC CGACGCCTAC GAC GTAGCCGTCG TTGTCACAAACCAAG radA 1929297 - 1930295 + | DNA repair and recombination protein RadA Pcal_2082 1930867 - 1930292 - | hypothetical protein TERM 1087 1931724 - 1931711 - g 78 -9.5 -3.9712 | GGAGCTGAGGATAAA CGCCG AGGC CGGCG TAGTGGACGGCATAT Pcal_2083 1930920 - 1932512 + | radical SAM domain-containing protein Pcal_2084 1932951 - 1932502 - | hypothetical protein TERM 1088 1932956 - 1932967 + H 70 -4.4 -4.48823 | CCTCGTCGCATGTCT CTCA GCGT TGAG TTTTATAAATTGATT Pcal_2085 1932997 - 1933308 + | zinc finger C2H2-type domain-containing protein Pcal_2086 1933301 - 1933798 + | hypothetical protein Pcal_2087 1933817 - 1934119 + | H+-transporting ATP synthase subunit F (atpF) TERM 1089 1934147 - 1934159 + F 70 -6.9 -4.12942 | ACCTTCACAATAAGT GCGGC GAT GTCGC TTTTCGAAGATTTAA Pcal_2088 1934153 - 1934725 + | H+-transporting two-sector ATPase, E subunit TERM 1090 1935127 - 1935147 + G 71 -11.2 -3.29511 | CCGGCGATGTGTTAG GCTCGGTT AAGGA AACCGAGC TTATAACCCACTACA Pcal_2089 1934715 - 1936499 + | V-type ATP synthase subunit A rpoH 1936528 - 1936755 + | DNA-directed RNA polymerase subunit H TERM 1091 1936925 - 1936915 - g 75 -5.4 -4.59027 | opp_overlap 1936915, overlap 1936910 AATCACCAGATAAAA TCGT TTA ACGA TTTTCTAGACAAAAG TERM 1092 1939925 - 1939936 + G 74 -7.2 -4.36914 | overlap 1939919 TCCTCATAGCGCACG GCGC CTCT GCGC TTTTGTACGAAAGAC Pcal_2091 1936786 - 1940169 + | DNA-directed RNA polymerase subunit beta TERM 1093 1941916 - 1941899 - g 75 -9.8 -3.93719 | opp_overlap 1941896 AGAAGCACATAATAA CGCCGC GCTACG GCGGCG CAATTATTGGCGCAA TERM 1094 1942607 - 1942596 - g 76 -4.4 -4.79223 | GTACATCAGGAAAAA TAGC GAGG GCTA CCTAATGGCCAAGAC Pcal_2092 1940407 - 1943061 + | DNA-directed RNA polymerase subunit alpha Pcal_2093 1943049 - 1944197 + | DNA-directed RNA polymerase subunit A'' Pcal_2094 1944231 - 1944536 + | 50S ribosomal protein L30E TERM 1095 1944680 - 1944660 - g 76 -3.2 -4.96848 | gap 1, opp_overlap 1944667, overlap 1944661 1944664 TGTGGTACAGAAAAA CCAAGCGGC GCTG GCCG-TGGG CAAGGGCGGCGCTAA Pcal_2095 1944529 - 1944963 + | transcription elongation factor NusA-like protein rps12P 1944993 - 1945436 + | 30S ribosomal protein S12P Pcal_2097 1945437 - 1946213 + | DNA-directed RNA polymerase, subunit D Pcal_2098 1946239 - 1946607 + | 50S ribosomal protein L18e Pcal_2099 1946604 - 1947164 + | 50S ribosomal protein L13P rps9p 1947181 - 1947609 + | 30S ribosomal protein S9P Pcal_2101 1947606 - 1947806 + | DNA-directed RNA polymerase subunit N Pcal_2102 1947838 - 1948098 + | LSM family small nuclear ribonucleoprotein Pcal_2103 1948095 - 1949303 + | S-adenosylmethionine synthetase Pcal_2104 1951046 - 1949295 - | hypothetical protein Pcal_2105 1951958 - 1951050 - | protein of unknown function RIO1 TERM 1096 1951173 - 1951155 - G 70 -3.8 -4.57341 | overlap 1951157 AACCCTTCGGAAAAA CGCTGAGA TGT TCTCAAGG TCGCGTCTTAGATAC Pcal_2106 1951987 - 1952541 + | hypothetical protein TERM 1097 1952640 - 1952650 + G 71 -8.2 -4.03234 | opp_overlap 1952627 AACGGCCTCTGTGGA CCGC GTC GCGG TTTATATCAAGAACC Pcal_2107 1952635 - 1953306 + | cytidyltransferase-like protein Pcal_2108 1953299 - 1953952 + | endonuclease V Pcal_2109 1954324 - 1953938 - | UspA domain-containing protein Pcal_2110 1955158 - 1954352 - | binding-protein-dependent transport systems inner membrane component TERM 1098 1954796 - 1954783 - G 73 -3.1 -4.79826 | ATAGAGTATCAAAAA GACCT ATAT AAGTC ATGAATCTAGCCAAG Pcal_2111 1955979 - 1955155 - | binding-protein-dependent transport systems inner membrane component Pcal_2112 1957397 - 1955976 - | extracellular solute-binding protein TERM 1099 1957138 - 1957153 + g 100 -11.8 -4.55287 | opp_overlap 1957135 GCGTTTACACCAGCG CCGCCG GGCA CGGCGG TTTTCTCTACCTGAA Pcal_2113 1957755 - 1957952 + | hypothetical protein Pcal_2114 1957985 - 1958263 + | translation elongation factor 1B (aEF-1B) Pcal_2115 1958296 - 1960491 + | AAA family ATPase, CDC48 subfamily protein Pcal_2116 1960488 - 1960709 + | hypothetical protein Pcal_2117 1960730 - 1961770 + | flap endonuclease-1 Pcal_2118 1961770 - 1962393 + | protein-L-isoaspartate O-methyltransferase aspC 1963676 - 1962390 - | aspartyl-tRNA synthetase Pcal_2120 1964225 - 1963704 - | transcription elongation factor NusA-like protein TERM 1100 1963813 - 1963825 + g 72 -4.8 -4.57837 | opp_overlap 1963803 GGCAACCGCCTCAGC TCCC GCGAG GGGA TTTTTACAACCGTCT TERM 1101 1963893 - 1963883 - G 71 -6.8 -4.18161 | TAGAAATCGTCAAAA GCCT AGC AGGC GACACGAGCTGGGCA TERM 1102 1964616 - 1964644 + G 81 -15.3 -2.52676 | opp_overlap 1964618, overlap 1964619 TTCGGCTACGGCATA GAGGGCGGGACGG TGG CTGTTCCGCCTTC TAAATTCCGCCGCTA TERM 1103 1964619 - 1964641 + G 83 -13.4 -3.41878 | opp_overlap 1964618, overlap 1964616 GGCTACGGCATAGAG GGCGGGACGG TGG CTGTTCCGCC TTCTAAATTCCGCCG Pcal_2121 1964277 - 1965974 + | radical SAM domain-containing protein Pcal_2122 1966168 - 1965971 - | hypothetical protein Pcal_2123 1966612 - 1966199 - | peptidyl-tRNA hydrolase TERM 1104 1966325 - 1966346 + g 72 -8.7 -3.79906 | TACTACGACGGCGGT GGGCAAGTC GAGC GACTTGGCC TTGTTGTAAAGCTCG Pcal_2124 1966626 - 1970369 + | peptidase S8 and S53 TERM 1105 1970362 - 1970373 + T 72 -4.4 -4.70659 | AGGGGGTGAGCGTTA TTGG CTAG CCAA TTTTTCAATCTCCAA Pcal_2125 1970790 - 1970359 - | NUDIX hydrolase Pcal_2126 1971421 - 1970816 - | hypothetical protein TERM 1106 1971189 - 1971221 + g 76 -12.6 -3.03028 | overlap 1971197 TTCTCAGACTCTTTG GCGCGGCAGGTGGC AAGCC GCCTTATGCCGCGC TCTCTCTGCCTGTTT sdhA 1971516 - 1973264 + | succinate dehydrogenase flavoprotein subunit sdhB 1973266 - 1973976 + | succinate dehydrogenase iron-sulfur subunit Pcal_2129 1973973 - 1974395 + | succinate dehydrogenase cytochrome b subunit Pcal_2130 1974392 - 1974745 + | succinate dehydrogenase subunit D Pcal_2131 1975580 - 1974807 - | proliferating cell nuclear antigen TERM 1107 1975324 - 1975335 + g 71 -7.2 -4.23045 | TCAAGCTTCTCTGTG GCGC CTAT GCGC TTTATTACGTCCTTC TERM 1108 1975696 - 1975716 + r 76 -11.1 -3.30798 | overlap 1975695 ACTCTTAATCTTTCT CAGCTCCTC TAT GAGGAGCGG TATTACTTGCTTGTA Pcal_2132 1976712 - 1975672 - | electron transfer flavoprotein, alpha subunit Pcal_2133 1977508 - 1976714 - | electron transfer flavoprotein beta-subunit Pcal_2134 1977803 - 1977513 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pcal_2135 1979074 - 1977800 - | FAD dependent oxidoreductase TERM 1109 1978073 - 1978087 + g 71 -7.8 -4.09685 | opp_overlap 1978062, overlap 1978064 1978061 CAAGTCCTCCGCCGA GGGGCT TCT AGCCTC TTTTACAGCATCCGC Pcal_2136 1979103 - 1979849 + | molybdopterin synthase subunit MoaE / molybdopterin synthase subunit MoaD Pcal_2137 1980210 - 1979830 - | hypothetical protein Pcal_2138 1981168 - 1980248 - | hypothetical protein TERM 1110 1980895 - 1980912 + g 76 -6.9 -4.4648 | overlap 1980897 CAAGAGGGCCCACCG CGGGGAG TATT CTCCCAG TTTTCTGATCCACAT Pcal_2139 1981796 - 1981203 - | multiple antibiotic resistance (MarC)-related protein TERM 1111 1981572 - 1981545 - G 79 -5.5 -4.84673 | GTAAAGAAGAGAAAA GGCCGCGAGTA CCAGGC CACTCGCCACC ATGAAGTCCCCCAGA TERM 1112 1981634 - 1981611 - G 78 -6.7 -4.64598 | overlap 1981602 GAAGTAGGCGAAAAA TTCTACGCC GACTAA GGCGAAGAA GGCCAAAATTAGGGA rpl37e 1982002 - 1981844 - | 50S ribosomal protein L37e Pcal_2141 1982241 - 1981999 - | LSM family small nuclear ribonucleoprotein Pcal_2142 1982314 - 1982613 + | hypothetical protein Pcal_2143 1982597 - 1982872 + | hypothetical protein Pcal_2144 1983290 - 1982844 - | PUA domain-containing protein Pcal_2145 1983333 - 1983818 + | XRE family transcriptional regulator Pcal_2146 1983808 - 1984965 + | small GTP-binding protein Pcal_2147 1984995 - 1985507 + | transcription factor IIE (TFIIE), alpha subunit Pcal_2148 1985504 - 1986217 + | hypothetical protein Pcal_2149 1987688 - 1986201 - | 7-cyano-7-deazaguanine tRNA-ribosyltransferase TERM 1113 1987221 - 1987197 - G 74 -12.8 -2.88861 | CAGTAGGTCGAGATA GGTGGCTCCC TGTAT GGGGGCCACC ACTAGCATGTCTAAG Pcal_2150 1988199 - 1987690 - | hypothetical protein Pcal_2151 1989873 - 1988389 - | type II secretion system protein E Pcal_2152 1991404 - 1989875 - | hypothetical protein Pcal_2153 1991986 - 1991456 - | SSU ribosomal protein S18P alanine acetyltransferase pyrB 1992900 - 1991983 - | aspartate carbamoyltransferase catalytic subunit TERM 1114 1993173 - 1993192 + G 75 -8.6 -4.04206 | TAAGGAGGGGCGCTT GCTGTGTA ATTG TACACGGC TTTCTATACCCCTCG Pcal_2155 1992929 - 1993537 + | orotidine-5'-phosphate decarboxylase Pcal_2156 1994643 - 1993534 - | hypothetical protein Pcal_2157 1994690 - 1995976 + | phosphomannomutase Pcal_2158 1997352 - 1995961 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1115 1997407 - 1997418 + H 74 -2.2 -5.16237 | gap 1 TTTGGATCCTCGTCA CG-GC TCG GCGCG TTTTTTCATCACATT Pcal_2159 1997581 - 1998018 + | hypothetical protein Pcal_2160 1998593 - 1998120 - | hypothetical protein Pcal_2161 1999511 - 1998705 - | GTP-binding protein, HSR1-related TERM 1116 1999141 - 1999155 + g 72 -5.7 -4.51812 | overlap 1999140 GTTGGTGCAACATGC CTACC CTTTA GGTAG TTTATTATTGTAGAC Pcal_2162 1999558 - 2000154 + | V-type ATPase, D subunit Pcal_2163 2000178 - 2000327 + | hypothetical protein Pcal_2164 2001641 - 2000610 - | H+-transporting ATP synthase subunit C Pcal_2165 2001961 - 2001638 - | hypothetical protein TERM 1117 2002048 - 2002021 - H 76 -7.6 -4.16016 | overlap 2002022 GGAGGCGTGAAGAAA CTTCTCGCGGCT GATC AGCCGCGCGGAA TATACATCACCGTCA Pcal_2166 2002131 - 2002928 + | SPFH domain-containing protein/band 7 family protein TERM 1118 2003795 - 2003827 + G 73 -12.5 -2.77523 | overlap 2003793 2003792 CGCTTATGGGGATGC CGGCCCACGGGGCCG TAG CCGCCGTGGGGGCCG TGCTATTAGTGGCAG Pcal_2167 2002915 - 2004201 + | nodulation efficiency protein NfeD TERM 1119 2004349 - 2004359 + F 72 -6.8 -4.25606 | opp_overlap 2004349, overlap 2004352 CCGCCGTTTATATTA GCTC AGG GAGC TTGTTTTACATGTTC Pcal_2168 2004638 - 2005108 + | hypothetical protein Pcal_2169 2005742 - 2005068 - | AMMECR1 domain-containing protein Pcal_2170 2005809 - 2006036 + | hypothetical protein Pcal_2171 2007160 - 2006033 - | PUA domain-containing protein TERM 1120 2006675 - 2006692 + g 81 -8.5 -4.36914 | TATCTTTGGCGCCTT GTAGAGA GACT TCTCTAC TTTTATGAAAAGCCC Pcal_2172 2007474 - 2007160 - | hypothetical protein TERM 1121 2007190 - 2007204 + g 93 -5.6 -5.49809 | TAGTATTATCTCCTT GGCCCT TTC GGGGTC TTTTTTTGCAATTTG Pcal_2173 2008679 - 2007579 - | translation initiation factor IF-2B subunit alpha Pcal_2174 2009292 - 2008630 - | RecB family-like endonuclease