TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.670162 %AT, 987028 nt, 5136 terms. Intergenic: 0.694535 %AT, H2T: 251228 nt, 1562 terms; T2T: 59199 nt, 794 terms; H2H: 59438 nt, 823 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|15891923|ref|NC_003103.1| Rickettsia conorii str. Malish 7, complete genome (length 1268755) RC0001 1 - 822 + | hypothetical protein TERM 1 1001 - 962 - f 76 -10.1 -2.85763 | overlap 959 AGATTGAAAAACCTA CTCGATGTCATCCCCGC CTACAC GCGGGAATGACATAAAA GCCATATGGACAATG trxA 1039 - 1356 + | thioredoxin rfbE 1367 - 2116 + | O-antigen export system ATP-binding protein RfbE TERM 2 2146 - 2125 - g 80 -7.5 -4.17701 | TTCATAAATGATAAA GTATTTTTT TTCT AAAAAATAC TGGCGAGCAATAGCA TERM 3 2480 - 2493 + G 72 -2.4 -5.33124 | ATTTGCTCATTTTCG GCAA TGTATT TTGC TTTTATTTTATTATT rfbA 2117 - 2893 + | O-antigen export system permease protein RfbA TERM 4 3692 - 3657 - g 86 -11.3 -2.55544 | opp_overlap 3656, overlap 3653 CGAGGAGCGAAGCGA CGTGGCAATCTCA GGAGATTTGA CGAGATTGCCACG CTCCTTGCAGTCGCT TERM 5 5758 - 5748 - g 70 -4 -5.12707 | GCAAAGTCTAAAAAA TGAA ATA TTCA GTGAAAATACAAAAA RC0005 2890 - 5991 + | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase RC0006 6277 - 6035 - | hypothetical protein RC0007 6580 - 6299 - | hypothetical protein lpxA 7405 - 6611 - | UDP-N-acetylglucosamine acyltransferase fabZ 7850 - 7413 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 6 7724 - 7737 + g 74 -5.3 -4.76644 | CTGTAAATTGCGGTT CGTTA ACAG TAACG TTTTTAATACCTGTT TERM 7 7820 - 7800 - G 74 -4 -5.14163 | ATCTACTAATAAAAA TGGATAGC GATGA GGTATCCA ATCCATGATTTCGGT TERM 8 7923 - 7958 + r 76 -2.7 -5.53288 | opp_overlap 7922 7923 7937 7942, overlap 7924 AATTGACGAAGCAAT CTAGTAAAAAGTACT AAAATC AGCACTTTTTGCTAA TTTTTTTGGATTGCC lpxD 9086 - 8046 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 9 10607 - 10597 - g 74 -5.4 -4.8543 | GAAGCCCTACAAAAA TCTG GTG CAGA CGGTATTATGGTCGG nifR3 9922 - 10941 + | nifR3-like protein RC0012 10959 - 11882 + | hypothetical protein RC0013 12641 - 12114 - | hypothetical protein znuA 13582 - 12629 - | zinc/manganese ABC transporter substrate binding protein pcnB 14889 - 13579 - | poly(A) polymerase TERM 10 14248 - 14236 - G 72 -3.3 -5.28315 | AGAAAACCGAAAAAA GCGTA GAA TTCGC AAATAATCTTCTTTA RC0016 15603 - 15379 - | hypothetical protein RC0017 16421 - 15687 - | putative competence locus E protein 3 TERM 11 16338 - 16326 - G 72 -3.4 -5.12971 | AAGATTTAATAAAAA CCTT GTAGT AAGG AAAATAATCATCACA RC0018 16681 - 16433 - | hypothetical protein TERM 12 21593 - 21583 - g 80 -5.4 -5.2422 | overlap 21584 AATTAGATGAAAAAA TGCT TTT AGCA ATAAATGCACAATTA TERM 13 22520 - 22555 + G 73 -7.8 -3.63744 | opp_overlap 22520, overlap 22518 22523 AAAACATCGTAATCA TAGTTATAATGCGGAA GCAT TACTGCATTATAATTA TCTTTTGCAGAGCAA TERM 14 22523 - 22552 + G 72 -7.3 -3.95435 | opp_overlap 22520, overlap 22520 22518 ACATCGTAATCATAG TTATAATGCGGAA GCAT TACTGCATTATAA TTATCTTTTGCAGAG sca1 17298 - 23006 + | cell surface antigen TERM 15 23089 - 23058 - f 73 -8.7 -3.18467 | opp_overlap 23055 23054 23055 AAACTTCTAACTTAA TGTCATGCCGTGG TCATAG CCACGGTATGACT AACTATATTGCTTAC RC0020 23481 - 23747 + | hypothetical protein RC0021 24352 - 24978 + | hypothetical protein RC0022 25436 - 25618 + | hypothetical protein RC0023 25983 - 26186 + | hypothetical protein atpF 26686 - 26192 - | F0F1 ATP synthase subunit B atpX 27159 - 26686 - | F0F1 ATP synthase subunit B' atpE 27402 - 27178 - | F0F1 ATP synthase subunit C atpB 28326 - 27598 - | F0F1 ATP synthase subunit A RC0028 28627 - 28331 - | hypothetical protein RC0029 29538 - 28705 - | hypothetical protein TERM 16 29524 - 29512 - G 76 -3.5 -5.51353 | overlap 29503 CAAAAATAATAAAAA TATTA GTA TAATA AAAATACTTCGCATA RC0030 29703 - 30224 + | hypothetical protein RC0031 32075 - 30471 - | hypothetical protein TERM 17 30920 - 30932 + g 70 -6.3 -4.29049 | opp_overlap 30920, overlap 30917 ATTGATATTTACCAA GCTTT TTA AAAGC TTCTTTTGCTACTTG TERM 18 31324 - 31344 + g 76 -3.3 -5.51165 | opp_overlap 31316 GCAGTAAGCGACGTA TCACCTAAG TAA TTTAGATGA TTTTTTTGAGCTTTT TERM 19 32416 - 32406 - R 88 -4 -5.66684 | GAATCCAGAAAAAAA GTAT TAA ATAC AGCAAATTTTTGAAA recF 33582 - 32500 - | recombination protein F TERM 20 33073 - 33083 + g 70 -4 -5.06016 | ATCATCTCTTCTATC TTCT ACT AGAA TTTTATTTCTCTCAT RC0033 33908 - 33606 - | putative coenzyme PQQ synthesis protein c TERM 21 34029 - 34043 + r 75 -7.2 -4.10179 | opp_overlap 34029 GTTCTTCTTCTATAA GATTAC CAA GTAATC TTTGTCTAGCTTGTA folA 34743 - 34249 - | dihydrofolate reductase RC0035 35045 - 34740 - | putative folate synthesis bifunctional protein RC0036 35226 - 34957 - | putative folate synthesis bifunctional protein RC0037 35838 - 35416 - | putative folate synthesis bifunctional protein RC0038 36058 - 35819 - | putative folate synthesis bifunctional protein TERM 22 36141 - 36159 + r 74 -7.6 -3.76952 | overlap 36155 TAGTAACGGTTACGT TTAGAAAA ATC TTTTCTAA TTTAGATTCGATAAA RC0039 37192 - 36524 - | hypothetical protein RC0040 38109 - 37792 - | hypothetical protein RC0041 38800 - 38531 - | hypothetical protein TERM 23 39799 - 39821 + H 74 -7.9 -3.78069 | opp_overlap 39803, overlap 39797 39803 TGTCATTTAGTATTT GAAATAGTA CTATC TACTATTTC TGTTCTTGTTTTTTA sco2 40072 - 40671 + | sco2 protein precursor RC0043 41251 - 40682 - | hypothetical protein RC0044 41317 - 41985 + | hypothetical protein TERM 24 42092 - 42043 - Tf 100 -11.5 -4.74103 | gap 1, overlap 42044 42047 GTGCGAATTGAAAAA CGCACT-CGGTGTCATCCCGTGGT CAA ACCACGGGATGACAACGGAAAACT GATCCACACGGGCAA TERM 25 42091 - 42044 - Tf 100 -15 -3.4398 | gap 1, overlap 42043 42047 TGCGAATTGAAAAAC GCACT-CGGTGTCATCCCGTGGT CAA ACCACGGGATGACAACGGAAAAC TGATCCACACGGGCA TERM 26 42086 - 42047 - Tf 100 -20.2 -2.86432 | gap 1, overlap 42044 42043 GAATTGAAAAACGCA CTCGGTGTCATCCCGTGGT CAA ACCACGGGATGACAACG-G AAAACTGATCCACAC RC0045 42703 - 42377 - | hypothetical protein RC0046 42551 - 43378 + | hypothetical protein RC0047 43432 - 43611 + | hypothetical protein TERM 27 43666 - 43693 + T 74 -9.2 -2.80113 | gap 1, opp_overlap 43661 GATACCAAATCGTCA TTGCGA-GCAGCC GTA GGCTGCGTGGCAA TCTCATGAAATAATA RC0048 45187 - 43865 - | hypothetical protein TERM 28 44563 - 44548 - G 74 -9 -3.07487 | overlap 44547 TTATATCGGCAAAAT GCCCAA GCTC TTGGGC TGCGATAATCTGAAG RC0049 45721 - 45197 - | hypothetical protein TERM 29 45414 - 45424 + g 76 -5.4 -4.9792 | GATTTTAACTTTATT GCAT CTA ATGC TTTTTGTCTACCATC RC0050 46100 - 45699 - | hypothetical protein RC0051 46377 - 46024 - | hypothetical protein RC0052 46715 - 46518 - | hypothetical protein RC0053 46998 - 46780 - | hypothetical protein phbB 47878 - 47153 - | acetoacetyl-CoA reductase TERM 30 47797 - 47807 + g 77 -4 -5.32944 | AATTAGCAACTACCG TAAG ACC CTTA TTTTTTAATTCTAAA RC0055 48323 - 48036 - | hypothetical protein RC0056 49068 - 48478 - | hypothetical protein RC0057 49389 - 49114 - | hypothetical protein RC0058 49778 - 49383 - | hypothetical protein TERM 31 50311 - 50300 - g 91 -4.4 -5.95946 | opp_overlap 50300 TTAATAATAAAAAAA TAGC AACA GCTA TTTTACAGTTTCGTA TERM 32 50403 - 50422 + G 81 -10 -3.17688 | opp_overlap 50403 50399 CAGAGACGTAACAGA GCTTGCCG AAAG CGGTAAGC TTGATCCGATAATTG TERM 33 51440 - 51429 - g 70 -4.4 -4.79223 | overlap 51422 51430 51431 TGAGATTATGAAAAA GCTT CAGG AAGC CGAAAGTATGGATAA clpB 49891 - 52464 + | clpB protein TERM 34 52629 - 52585 - T 100 -10.2 -5.07567 | gap 1, overlap 52586 52587 GCATAGCTCAAAAAA TGCGTTTGATGTCATTCCTGC GGGA GCGGGAATGACACAAAACG-A GCAATGCAACAAGAC TERM 35 52629 - 52586 - T 95 -11.8 -3.63817 | overlap 52585 52587 CATAGCTCAAAAAAT GCGTTTGATGTCATTCCTGC GGGA GCGGGAATGACACAAAACGA GCAATGCAACAAGAC TERM 36 52628 - 52587 - T 100 -15.3 -2.77567 | overlap 52585 52586 ATAGCTCAAAAAATG CGTTTGATGTCATTCCTGC GGGA GCGGGAATGACACAAAACG AGCAATGCAACAAGA RC0060 53196 - 52705 - | hypothetical protein TERM 37 53219 - 53247 + r 78 -10.5 -2.83715 | opp_overlap 53219, overlap 53224 CCTCTTTTTTATATA TGTAATTGCCATG TTT TATGGTAATTACA TATCATACTACTAAA gcp 54357 - 53323 - | O-sialoglycoprotein endopeptidase aco1 55662 - 54469 - | acyl-CoA desaturase 1 TERM 38 54549 - 54561 + g 72 -4.9 -4.86033 | opp_overlap 54549 TAATTTTTTTATTAA CTATT TTT AATAG TTTTTCTGAAGATTT RC0063 56161 - 55790 - | putative transcriptional regulator rpsF 56594 - 56959 + | 30S ribosomal protein S6 TERM 39 57063 - 57039 - g 80 -7.3 -4.57755 | AGGTAGGAGATAAAA CTGCTAAAAAA GTA TTTTTTAGAAG ACGTAAAGGATGCCC rpsR 56984 - 57271 + | 30S ribosomal protein S18 rplI 57283 - 57798 + | 50S ribosomal protein L9 mesJ 58097 - 59533 + | cell cycle protein MesJ TERM 40 59552 - 59593 + F 76 -9.1 -3.17622 | opp_overlap 59549 59547 59562 59566, overlap 59550 59547 59553 59562 59566 CGGTATTTAAGAGGT TATCTGTAAATAAATTTTA ACGA TAAAATTTATTTACAGACC TCTCTTATACCAATA TERM 41 59553 - 59592 + F 100 -12.6 -2.50252 | opp_overlap 59549 59547 59562 59566, overlap 59552 59550 59547 59562 59566 GGTATTTAAGAGGTT ATCTGTAAATAAATTTTA ACGA TAAAATTTATTTACAGAC CTCTCTTATACCAAT ftsH 59634 - 61547 + | cell division protein ftsH TERM 42 61984 - 62005 + F 100 -8.7 -5.21683 | overlap 61986 AAATGCTCTTGATGT CATTCCCGC AGAA GCGGGAATC TTTGTTTTTTTAGGT TERM 43 61986 - 62003 + F 100 -11.3 -4.21073 | overlap 61984 ATGCTCTTGATGTCA TTCCCGC AGAA GCGGGAA TCTTTGTTTTTTTAG sdhB 62230 - 63015 + | succinate dehydrogenase iron-sulfur subunit RC0070 63304 - 63459 + | hypothetical protein RC0071 64819 - 63599 - | hypothetical protein lgt 65577 - 64798 - | prolipoprotein diacylglyceryl transferase RC0073 65822 - 66985 + | hypothetical protein TERM 44 67039 - 67072 + F 100 -11.9 -3.93057 | AATAAATTAAATTTG TATCCAAGATGGAAG TTGT CTTTCAGCTTGGATA TTTACTACTTTTGAA TERM 45 67130 - 67146 + F 74 -8.1 -3.6106 | opp_overlap 67129 67130 TTATTTGCTCTAAAT GCTTTAA AAC TTAAAGC TTTAAAAATATTAAA TERM 46 68119 - 68102 - g 70 -7.1 -3.72152 | CAATTAAAAGCAGAA TTTTTGC TGGA GCAAAAA AAGTAGACTTGCTTG yidC 67177 - 68859 + | putative inner membrane protein translocase component YidC pgsA 68863 - 69408 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RC0076 69422 - 69982 + | hypothetical protein RC0077 70571 - 70152 - | hypothetical protein RC0078 70755 - 71027 + | putative BioC RC0079 71594 - 72442 + | hypothetical protein def3 73333 - 72659 - | polypeptide deformylase TERM 47 72875 - 72893 + g 74 -7.4 -4.07568 | AATTTTCTTGAATCT TGCTACCG GTC CTGTAGCA TTTTCAACAGAAAAG TERM 48 72982 - 73006 + g 71 -2.1 -5.50499 | overlap 72984 AAATAGTTTTAGGCA TTGTATCCTTA AGG TCAGGATGCCA TTTTTTTAACTCTGC TERM 49 73622 - 73606 - g 72 -5.9 -4.47397 | AGAAAGATATGAAAA TAAGAAG TTT CTTCCTA TGGCGTTTATGATGT tlc1 73532 - 75028 + | ADP,ATP carrier protein TERM 50 75101 - 75156 + F 100 -16.7 -3.72592 | opp_overlap 75101 75106 75150, overlap 75091 75106 AATTTTCATTAATAA TTAAAGAGCTTTTTTGCTACACA TTATAAGATT TTTGTAGCAAAAAAGCTCTTTAA TTATTAATGAAAATT TERM 51 75156 - 75101 - f 100 -16.7 -3.72592 | opp_overlap 75091 75101 75106, overlap 75106 75150 AATTTTCATTAATAA TTAAAGAGCTTTTTTGCTACACA TTATAAGATT TTTGTAGCAAAAAAGCTCTTTAA TTATTAATGAAAATT TERM 52 75106 - 75151 + F 100 -12.2 -4.09805 | opp_overlap 75101 75106 75150, overlap 75091 75101 TCATTAATAATTAAA GAGCTTTTTTGCTACACA TTATAAGATT TTTGTAGCAAAAAAGCTC TTTAATTATTAATGA TERM 53 75151 - 75106 - f 100 -12.2 -4.09805 | opp_overlap 75091 75106 75101, overlap 75101 75150 TCATTAATAATTAAA GAGCTTTTTTGCTACACA TTATAAGATT TTTGTAGCAAAAAAGCTC TTTAATTATTAATGA TERM 54 75960 - 75980 + G 71 -5.5 -4.64048 | overlap 75962 75973 AATAAGCTAATATGG TATGTTTGT TTA GCAAACATG TTTGTTTATATAATA glpT 75225 - 76520 + | glycerol-3-phosphate transporter ndk 76545 - 76967 + | nucleoside diphosphate kinase TERM 55 77013 - 77041 + G 70 -8.1 -3.10464 | opp_overlap 77022, overlap 77022 GGCGGTGGACATGCA GGCGTAGAAGCAG CCG CTGCTTCTGCACG TCTTGGAGTTCCTAC TERM 56 78581 - 78599 + G 71 -7.5 -3.40597 | opp_overlap 78585 78591, overlap 78576 78591 GCAATTACTCTATAT TGAAGCA AAATA TGCTTCA TATTTAACTAGACAA gidA 76971 - 78839 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidB 78820 - 79398 + | glucose-inhibited division protein B soj 79395 - 80162 + | soj protein spo0J 80149 - 81009 + | stage 0 sporulation protein J abcT1 81267 - 82934 + | putative ABC transporter ATP-binding protein TERM 57 83146 - 83124 - g 78 -2 -5.81412 | opp_overlap 83128, overlap 83125 83128 TTTATTTAAAAAAAA TTATTAACCT AGA AGGTTATTAT CATGGTAGTTATGAT RC0089 82937 - 83254 + | hypothetical protein kdsA 83290 - 84114 + | 2-dehydro-3-deoxyphosphooctonate aldolase RC0091 84596 - 85135 + | hypothetical protein RC0092 85273 - 85491 + | putative cation efflux system protein TERM 58 85585 - 85623 + T 100 -14.1 -3.41229 | gap 1, opp_overlap 85577, overlap 85579 TTAAAAGTTTGACGT TGC-GATGTCATTGCTGC TGTT GCAGGAATGACATCGGCA TTCTAATAACAATGT hesB1 85990 - 85658 - | hesB protein dgtP 86219 - 87373 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein argS 87487 - 89217 + | arginyl-tRNA synthetase RC0096 89390 - 90064 + | hypothetical protein parC 90242 - 92458 + | DNA topoisomerase IV subunit A TERM 59 92680 - 92714 + T 73 -9.5 -2.64155 | opp_overlap 92680, overlap 92686 TCTTTAAATAATAAT TTAGAAGCGGTTGCA TATCT TGTAACTGCTTTTAA TCCATTTACAAAGGA TERM 60 92686 - 92708 + T 72 -6.3 -4.33165 | opp_overlap 92680, overlap 92680 AATAATAATTTAGAA GCGGTTGCA TATCT TGTAACTGC TTTTAATCCATTTAC TERM 61 92853 - 92798 - T 93 -11.6 -3.26262 | gap 1, opp_overlap 92811 92816 92818, overlap 92796 92800 92803 ATAATAAAAATCATA TATCACGTGATTACCATATATTGTG GTTGCGT CACAATATATGGTAATCA-GAGAAA ATCAATATCTAAAAA TERM 62 92851 - 92800 - T 100 -14.2 -3.1709 | gap 1, opp_overlap 92811 92816 92818, overlap 92798 92796 92803 AATAAAAATCATATA TCACGTGATTACCATATATTGTG GTTGCGT CACAATATATGGTAATCA-GAGA AAATCAATATCTAAA TERM 63 92848 - 92803 - T 100 -14.5 -2.76198 | gap 1, opp_overlap 92811 92816 92818, overlap 92800 92798 92796 AAAAATCATATATCA CGTGATTACCATATATTGTG GTTGCGT CACAATATATGGTAATCA-G AGAAAATCAATATCT TERM 64 93132 - 93088 - T 93 -6 -5.95166 | gap 1, opp_overlap 93097 TTCAATTAAAAAAAA TATAATAACCAAGGCATAAGA TTAC TCTAA-GCCTTGATTATAATA GTGATGGCAAATTAA RC0098 94475 - 93159 - | hypothetical protein dcd 94755 - 95327 + | deoxycytidine triphosphate deaminase secB 95373 - 95831 + | preprotein translocase subunit SecB czcR 96056 - 96769 + | transcriptional activator protein czcR queF 96773 - 97594 + | 7-cyano-7-deazaguanine reductase TERM 65 97671 - 97695 + T 70 -8.6 -2.67696 | opp_overlap 97663, overlap 97666 AAACGCATCCGTTGT CATTCCGTGG CTTGA CCACGGAATC TAGCTTATTAATAGT TERM 66 97743 - 97763 + T 72 -6.7 -4.11692 | GATTCCGTGGGTCAA GCCACGGGG TGA CACAGTGGC TTTTACCGGTCCATC RC0103 98463 - 97903 - | hypothetical protein pntB 99915 - 98518 - | NAD(p) transhydrogenase subunit beta TERM 67 100028 - 99995 - R 100 -3.9 -6.32976 | gap 1, overlap 99996 AAAAAAATAAAAAAA CTG-GATCCCGCGA TATCAAG TCGCGGGATGACAA ATACGCTTCAAGAAC RC0105 100790 - 100056 - | hypothetical protein TERM 68 101230 - 101252 + G 72 -3.4 -5.16206 | overlap 101231 CTTACCATAGCTCCC GTTACTACTG CAA CAGTCGTAAG TTTTTCTATTCCTTT RC0106 100945 - 101829 + | hypothetical protein proP1 101816 - 103072 + | proline/betaine transporter TERM 69 103467 - 103450 - g 79 -2.7 -5.74086 | opp_overlap 103450 AAACCAAAGAAAAAA CACTAAA GATT TTAAGTG ATTATTTACAGAAAG RC0108 103353 - 103538 + | hypothetical protein secG 103905 - 104207 + | preprotein translocase subunit SecG TERM 70 104329 - 104286 - T 100 -12.6 -4.11216 | gap 1, opp_overlap 104272, overlap 104290 TGTGGATCGGTAAAA TCCACTGTGTCACCCCGTGGC TTG ACCACGGGGTGACAGA-TAAA AGTACTGGATTCCTG TERM 71 104326 - 104290 - T 100 -15.9 -2.75081 | overlap 104286 GATCGGTAAAATCCA CTGTGTCACCCCGTGGC TTG ACCACGGGGTGACAGAT AAAAGTACTGGATTC TERM 72 105008 - 105028 + T 78 -6.1 -4.731 | TTACTATATTTAGTA CTCCAGTAT TCT ATGCAGGAG TTTTGTTAATAAGTT TERM 73 105049 - 105093 + T 87 -8.1 -4.71186 | opp_overlap 105058, overlap 105041 105050 105058 TTAATAAGTTTATTC ATTAAGAAAGGATAAGCTCTT AGG AAAAGCTTATCCTTATTTAAA TTTTCTATTGGTGAT TERM 74 105050 - 105092 + T 93 -11.6 -3.41627 | opp_overlap 105058, overlap 105041 105049 105058 TAATAAGTTTATTCA TTAAGAAAGGATAAGCTCTT AGG AAAAGCTTATCCTTATTTAA ATTTTCTATTGGTGA TERM 75 105058 - 105084 + T 100 -11 -4.0921 | opp_overlap 105058, overlap 105041 105050 105049 TTATTCATTAAGAAA GGATAAGCTCTT AGG AAAAGCTTATCC TTATTTAAATTTTCT TERM 76 105084 - 105058 - T 100 -13.2 -4.258 | opp_overlap 105041 105058 105050 105049 TTATTCATTAAGAAA GGATAAGCTCTT AGG AAAAGCTTATCC TTATTTAAATTTTCT sca2 110496 - 105109 - | 190 kD antigen precursor TERM 77 105872 - 105890 + g 74 -6.1 -4.43668 | overlap 105887 GTACGATTTTGATAT TTTGGAA TATTC TTCCAAA TTCTTTGTTTGTTGA TERM 78 106720 - 106736 + g 77 -3.1 -5.59534 | TTTTGTCAATTGCTG TATATAA ATA TTATGTA TTTTTTGTTCTAGTT TERM 79 108116 - 108157 + g 83 -11.2 -2.85657 | opp_overlap 108116, overlap 108113 108123 ATTTGACGTATAACA TTTGTAAGATCAGCTTGT CTTTTT ATAAGCTGATCTTGTAAA TCATTAGCTTTTGTA TERM 80 108123 - 108150 + g 78 -9.3 -3.39595 | opp_overlap 108116, overlap 108116 108113 GTATAACATTTGTAA GATCAGCTTGT CTTTTT ATAAGCTGATC TTGTAAATCATTAGC TERM 81 108761 - 108790 + g 79 -7.4 -4.46926 | overlap 108762 TAGGGTTGCATTCTG TTTTTTAACTCT AATTGC AGAGTTAAAAAG TTTTCTACTGAACTC TERM 82 108762 - 108789 + g 74 -8.7 -3.27674 | overlap 108761 AGGGTTGCATTCTGT TTTTTAACTCT AATTGC AGAGTTAAAAA GTTTTCTACTGAACT TERM 83 109214 - 109235 + g 71 -6.7 -4.12902 | GTTAAATTACCCTTA CTTGCTTTA GTAT TAAAGTAAG TTTTAAAAGTACTTA cysS 110730 - 112109 + | cysteinyl-tRNA synthetase TERM 84 112122 - 112136 + F 73 -8.6 -3.06265 | opp_overlap 112122 112121 112124, overlap 112124 TAAAAGCTTGTAAAT TACGCA ATA TGCGTA TATAATTTATGGGCT TERM 85 112136 - 112122 - f 71 -8.6 -2.76009 | opp_overlap 112122 112124, overlap 112121 112124 TAAAAGCTTGTAAAT TACGCA ATA TGCGTA TATAATTTATGGGCT rpsB 112356 - 113243 + | 30S ribosomal protein S2 TERM 86 113300 - 113342 + F 100 -11 -4.82901 | opp_overlap 113310, overlap 113304 CTTGATCGCGGGATC CAGCTTGAAATACTAATATT AAT AATATTAGTATTTTAAATTG TTTTTATGGACCCCA TERM 87 113304 - 113338 + F 100 -12.6 -3.31001 | opp_overlap 113310, overlap 113300 ATCGCGGGATCCAGC TTGAAATACTAATATT AAT AATATTAGTATTTTAA ATTGTTTTTATGGAC TERM 88 113332 - 113310 - f 81 -9.4 -3.57792 | opp_overlap 113304 113300 GGATCCAGCTTGAAA TACTAATATT AAT AATATTAGTA TTTTAAATTGTTTTT tsf 113440 - 114369 + | elongation factor Ts TERM 89 114551 - 114531 - f 100 -14.1 -3.15663 | opp_overlap 114522, overlap 114547 AGTTATTTTTATGAA TACCGTGGT CAA ACCACGGTA TGACACCGAATACGT TERM 90 115117 - 115086 - g 73 -7.6 -3.57792 | opp_overlap 115086 115101 GTACTGATGCTGAAA GTAAAATAACTT ATATAACA AAGTTATTTTAC TTAAGTATCCTTCGT RC0114 114842 - 115168 + | hypothetical protein RC0115 115165 - 115353 + | hypothetical protein RC0116 115343 - 115534 + | hypothetical protein TERM 91 115621 - 115631 + G 85 -6.8 -5.03314 | opp_overlap 115613 115621 GCAAATATGCCTAAA GCAG ATC CTGC TTTTTTAAAGATACA RC0117 115531 - 115749 + | hypothetical protein kdtA 117288 - 115894 - | 3-deoxy-D-manno-octulosonic-acid transferase RC0119 117941 - 117285 - | hypothetical protein aatA 119297 - 118092 - | aspartate aminotransferase TERM 92 118891 - 118880 - G 78 -5.8 -4.91712 | CGCAATTTACAAAAA CAGG TGTT CCTG TGCTAAGTGCAACCA RC0121 119813 - 119619 - | hypothetical protein RC0122 119956 - 120960 + | hypothetical protein vacJ 120938 - 121720 + | vacJ lipoprotein precursor RC0124 121632 - 122339 + | hypothetical protein TERM 93 123098 - 123084 - g 80 -5.8 -5.05782 | overlap 123095 ATCGAGTTCAAAAAA TTAGTA ATT TACTAA ATATAGATTCAGCTT RC0125 122822 - 123172 + | putative ribose-phosphate pyrophosphokinase RC0126 123153 - 123320 + | putative ribose-phosphate pyrophosphokinase RC0127 123292 - 123516 + | hypothetical protein alr 123583 - 124650 + | alanine racemase TERM 94 124725 - 124704 - f 90 -7.3 -5.62552 | overlap 124707 AAAAAAATTAAAAAA GACTGGATC CCGC GATCAAGTC GCGGGATGACATTAG RC0129 124807 - 125586 + | ABC transporter permease protein TERM 95 126207 - 126184 - g 74 -3.8 -5.17576 | opp_overlap 126187, overlap 126186 126187 GAGGAATGCAAAAAA GAGTAGCCCT TGCT AGGGCTATTT GTAGTACACCGTCGA TERM 96 126205 - 126186 - g 70 -6.4 -4.20888 | opp_overlap 126187, overlap 126184 126187 GGAATGCAAAAAAGA GTAGCCCT TGCT AGGGCTAT TTGTAGTACACCGTC TERM 97 126204 - 126187 - g 81 -9.9 -3.11448 | opp_overlap 126187, overlap 126186 126184 GAATGCAAAAAAGAG TAGCCCT TGCT AGGGCTA TTTGTAGTACACCGT TERM 98 126187 - 126204 + G 90 -9.9 -3.96327 | opp_overlap 126187 126186 126184 GAATGCAAAAAAGAG TAGCCCT TGCT AGGGCTA TTTGTAGTACACCGT mkl 125739 - 126494 + | ribonucleotide ABC transporter ATP-binding protein TERM 99 126599 - 126619 + G 80 -6.3 -4.80167 | opp_overlap 126599 126603 ATATAATAAAAATAG TAATTATTC TTG GAATAGTTA TTTTAATTTTTAGTC RC0131 126496 - 126744 + | hypothetical protein RC0132 127030 - 126803 - | hypothetical protein TERM 100 127087 - 127098 + r 72 -4.4 -5.08483 | GTGAATTAATATTTC TAGC TAAT GCTA TTTTATTTCATTTTA RC0133 127601 - 127305 - | hypothetical protein TERM 101 127646 - 127660 + r 73 -3.6 -5.22943 | TTACTACATTTTTTA CTAATT TTG GATTAG TTTTTTGAATTTCCT RC0134 128370 - 127873 - | hypothetical protein TERM 102 128241 - 128259 + g 77 -8.9 -3.21925 | AAAAACCAACTTTAT GCTGTTC CACAC GAACAGC TTCATAATCAACTAT RC0135 128753 - 128370 - | hypothetical protein rpmB 129131 - 129424 + | 50S ribosomal protein L28 rpmE 129421 - 129657 + | 50S ribosomal protein L31 TERM 103 130141 - 130109 - f 91 -8.7 -4.82901 | opp_overlap 130119, overlap 130119 CGGGGTCCATAAAAA CAATAAAAAATACTA ATA TAGTATTTTTAACTG GATCCAGTGGTCAAG TERM 104 130131 - 130119 - f 90 -4.9 -5.80727 | opp_overlap 130119, overlap 130109 AAAAACAATAAAAAA TACTA ATA TAGTA TTTTTAACTGGATCC RC0138 130197 - 130907 + | GTPase EngB argB 130855 - 131778 + | acetylglutamate kinase RC0140 131791 - 132078 + | hypothetical protein virB4 132168 - 134585 + | virB4 protein precursor TERM 105 134600 - 134620 + F 73 -8.2 -3.41024 | overlap 134598 AATGCCTGTCTGTCA TCCCACGG CTTGA CCGCGGGA TCTTGTCTTACAGAC TERM 106 134643 - 134673 + F 100 -9.7 -4.62069 | TTACAGACTGTATTC TGAGATCCCGTGG ACAAG CCACGGGATGACA TTTTTACAATGCGAG TERM 107 135223 - 135209 - g 85 -2.8 -6.23545 | GGCAAATAAAAAAAA GGAATA TCA TGTTCC ATATAGTGGTAAGCC TERM 108 136377 - 136395 + G 72 -7.4 -3.77302 | ATGATCTCGTTCTTG CTACAACC TAT GGTGGTAG TTACTTTTATGATCA RC0142 134703 - 137684 + | hypothetical protein RC0143 137671 - 139656 + | hypothetical protein RC0144 139663 - 142563 + | hypothetical protein TERM 109 142644 - 142615 - f 88 -9.4 -4.0386 | overlap 142641 GAAATAATTGACAAA GCAATCTCAGGA GTGATT TCATGAGATTGC CGTGCAGCCATACAA TERM 110 144280 - 144266 - g 89 -8.6 -4.68424 | opp_overlap 144266 TAAGTTAGTTAAAAA TTCTGC AGT GCAGAA TTTAGCTAAAACTGC TERM 111 144266 - 144280 + G 77 -8.6 -3.65351 | opp_overlap 144266 TAAGTTAGTTAAAAA TTCTGC AGT GCAGAA TTTAGCTAAAACTGC TERM 112 144390 - 144400 + G 80 -5.4 -5.26875 | opp_overlap 144390 144388 CGTATATGCAAAATA GCTA TAG TAGC TTTTTTAATTAGAGA RC0145 142737 - 145412 + | hypothetical protein RC0146 145565 - 149026 + | hypothetical protein TERM 113 149350 - 149325 - f 70 -4.1 -4.92314 | AGGAATCCAGAAAAA TAACTTCAATA TTGA TACAGAAGTTA CATATTTGATAAAAT RC0147 149960 - 150427 + | putative phosphate acetyltransferase (Pta) RC0148 150702 - 150935 + | putative acetate kinase (AckA) TERM 114 151001 - 150984 - gf 74 -8.5 -3.27406 | opp_overlap 150983, overlap 150983 CTCCTATTACAAAAG TTTTCGG TTTA CCGAAAA AATATTATGATAAAG RC0149 150866 - 151117 + | putative acetate kinase (AckA) RC0150 151180 - 151548 + | putative acetate kinase (AckA) TERM 115 152587 - 152570 - g 86 -4.1 -5.75538 | GTTAAAAAATAAAAA CCTCATA TTCT TATGTGG ACGTTACGAAGGGAT trmD 152244 - 152948 + | tRNA (guanine-N(1)-)-methyltransferase rplS 152966 - 153382 + | 50S ribosomal protein L19 TERM 116 153450 - 153477 + T 74 -9.2 -2.80113 | gap 1, opp_overlap 153446 153445 ATACTAAATACGTCA TTGCAA-GCAGCC GTA GGCTGCATGGCAA TCTCATGAAATAATA RC0153 153788 - 153552 - | hypothetical protein secF 153861 - 154787 + | preprotein translocase subunit SecF nuoF 154952 - 156217 + | NADH dehydrogenase I subunit F lepB 156401 - 157201 + | signal peptidase I rnc 157201 - 157884 + | ribonuclease III era 157877 - 158896 + | GTP-binding protein Era ruvC 159014 - 159487 + | Holliday junction resolvase TERM 117 160088 - 160078 - g 77 -3.2 -5.60993 | CTCCCGACAAAAAAA CTGC TAT GCAA CAAAGTATCACTAAT RC0160 159489 - 160154 + | tRNA/rRNA methyltransferase RC0161 160770 - 160162 - | hypothetical protein RC0162 161888 - 160842 - | hypothetical protein TERM 118 161382 - 161397 + g 74 -9 -3.16564 | overlap 161380 TTTTTGGAGTTCCAA GTTCGC TGCG GCGAAC TGTTCAGTTACGTTG mrp 162844 - 161885 - | Mrp protein TERM 119 162417 - 162446 + g 71 -8.7 -2.8547 | gap 1, opp_overlap 162417 TTAATGCCGAATATA TGCGGA-ATTGACG GAC CGTAAATATCCGCA TCTACTATCCCGACT TERM 120 162446 - 162417 - G 72 -8.7 -3.08867 | gap 1, opp_overlap 162417 TTAATGCCGAATATA TGCGGA-ATTGACG GAC CGTAAATATCCGCA TCTACTATCCCGACT TERM 121 162559 - 162574 + g 72 -4.8 -4.77757 | overlap 162568 AGATAATTTTTTTTA CATTTT CTAC AAAATG TTTTGGTTTTTGAAC TERM 122 162996 - 162986 - g 74 -3.2 -5.47399 | TCAATTTTAAAAAAA TCCC CAT GGAA AGATTTTGATTCTGA hflK 162950 - 163990 + | protease activity modulator HflK TERM 123 163994 - 164033 + F 79 -8.1 -3.91908 | gap 2, opp_overlap 163986 164031, overlap 163986 163992 163995 ATTAAACCATAGGGG TGCT--ATGTTATTCCCGC TTTT GCGGGAATGACATCAAGCG TGTTTTTCACGCTAT TERM 124 163995 - 164032 + F 75 -9.4 -2.94422 | gap 2, opp_overlap 163986 164031, overlap 163986 163994 163992 TTAAACCATAGGGGT GCT--ATGTTATTCCCGC TTTT GCGGGAATGACATCAAGC GTGTTTTTCACGCTA TERM 125 164249 - 164262 + G 74 -3.9 -5.14965 | TTAAAATCCCGTTTA TTCAA AATG TTGAA TTTTTTGATAAGCGT hflC 164083 - 164943 + | hflC protein htrA 164972 - 166507 + | periplasmic serine protease TERM 126 166616 - 166592 - f 93 -8.8 -4.88795 | opp_overlap 166592 ATTTAATAAAAGAAA GCTATAAAAA TAAGT TTTTTATAGC TTTTGCTGGATGCCC TERM 127 166592 - 166616 + F 84 -8.8 -4.2828 | opp_overlap 166592 ATTTAATAAAAGAAA GCTATAAAAA TAAGT TTTTTATAGC TTTTGCTGGATGCCC RC0167 166684 - 167427 + | hypothetical protein sdhC 167594 - 167968 + | succinate dehydrogenase cytochrome b-556 subunit TERM 128 168167 - 168154 - g 72 -2.4 -5.46698 | opp_overlap 168162 TGTAAAAGCAAAAAA TAGC GGTTCT GCTA AAAGCGGTTCTCATC sdhD 168113 - 168493 + | succinate dehydrogenase hydrophobic membrane anchor protein TERM 129 168528 - 168497 - f 72 -4.4 -5.06735 | gap 1, overlap 168498 TATAAAGGATAAAAA GTGTCATACCGCGGC TTG ACCGCGGTATC-CAG AAAACAATATTGTGT TERM 130 168527 - 168498 - f 72 -7.9 -3.62414 | gap 1, overlap 168497 ATAAAGGATAAAAAG TGTCATACCGCGGC TTG ACCGCGGTATC-CA GAAAACAATATTGTG sdhA 168627 - 170417 + | succinate dehydrogenase flavoprotein subunit yqiY 170563 - 171219 + | amino acid ABC transporter permease protein TERM 131 171310 - 171340 + F 73 -8.4 -3.51235 | opp_overlap 171311 171315, overlap 171311 171315 TAGAAATGATTGAAA ATAAAGGGTGGAAG TAT TTTTCACCCTTTAA TTATCGTATATATAA TERM 132 171339 - 171311 - f 84 -9 -4.26681 | opp_overlap 171310 171311 171315, overlap 171315 AGAAATGATTGAAAA TAAAGGGTGGAA GTATT TTTCACCCTTTA ATTATCGTATATATA TERM 133 171311 - 171339 + F 89 -11.9 -2.70259 | opp_overlap 171311 171315, overlap 171310 171315 AGAAATGATTGAAAA TAAAGGGTGGAAG TAT TTTTCACCCTTTA ATTATCGTATATATA TERM 134 171335 - 171315 - f 72 -5.4 -4.6951 | opp_overlap 171311 171310 171315, overlap 171311 ATGATTGAAAATAAA GGGTGGAA GTATT TTTCACCC TTTAATTATCGTATA TERM 135 171315 - 171335 + F 79 -8.3 -4.03179 | opp_overlap 171315 171311, overlap 171311 171310 ATGATTGAAAATAAA GGGTGGAAG TAT TTTTCACCC TTTAATTATCGTATA rpsL 171380 - 171769 + | 30S ribosomal protein S12 rpsG 171796 - 172278 + | 30S ribosomal protein S7 TERM 136 174065 - 174080 + G 78 -9 -3.53224 | opp_overlap 174064 174065 ACTTGCGTTTGAAAT TGCTGC AAAG GCAGCA TTTAGGGAAGGGATG TERM 137 174080 - 174065 - g 72 -9 -2.71791 | opp_overlap 174065, overlap 174064 ACTTGCGTTTGAAAT TGCTGC AAAG GCAGCA TTTAGGGAAGGGATG fusA 172290 - 174389 + | elongation factor G TERM 138 174501 - 174517 + F 74 -3.1 -5.45652 | opp_overlap 174496, overlap 174496 TAATAACAAATATTT TTAATAA CTT TTATTGA TTTTTTATTAAAAAT secE 174758 - 175012 + | preprotein translocase subunit SecE nusG 175028 - 175606 + | transcription antitermination protein NusG TERM 139 175744 - 175758 + F 89 -4.3 -5.87996 | opp_overlap 175744 175736 GAAATAATAAAAAAC TTCTG ATTTA CAGAA TTTTTTTCTTCCTTG rplK 175877 - 176314 + | 50S ribosomal protein L11 rplA 176320 - 177039 + | 50S ribosomal protein L1 rplJ 177150 - 177659 + | 50S ribosomal protein L10 rplL 177855 - 178232 + | 50S ribosomal protein L7/L12 TERM 140 178515 - 178537 + F 72 -2.9 -5.44119 | TAGATTTTAAGAAGT TAATTTAAA GCTAA TTTAAGTTA TTTTTTTGCAATAGG TERM 141 178885 - 178921 + F 76 -6.2 -4.57581 | gap 1, opp_overlap 178885 178888, overlap 178888 178912 TACTGCAAATTATAA GTATTTTATTGAAATAG GTAG CTATTCCAATAAAA-AC TTTATTGTTTAAAAT TERM 142 178921 - 178885 - f 74 -8.4 -3.60865 | gap 1, opp_overlap 178885 178888 178912, overlap 178888 TACTGCAAATTATAA GTATTTTATTGAAATAG GTAG CTATTCCAATAAAA-AC TTTATTGTTTAAAAT TERM 143 178888 - 178919 + F 70 -9 -2.59355 | opp_overlap 178885 178888, overlap 178885 178912 TGCAAATTATAAGTA TTTTATTGAAATAG GTAG CTATTCCAATAAAA ACTTTATTGTTTAAA TERM 144 178919 - 178888 - f 87 -11.2 -2.92144 | opp_overlap 178888 178885 178912, overlap 178885 TGCAAATTATAAGTA TTTTATTGAAATAG GTAG CTATTCCAATAAAA ACTTTATTGTTTAAA TERM 145 179497 - 179515 + G 77 -9 -3.24289 | overlap 179506 AAGTTATGCTGCTCC TCTTAAAG TTA CTTTAAGA TTAAGTATTTGGGAT TERM 146 182762 - 182772 + G 74 -5.4 -4.83169 | opp_overlap 182762 GAAAGACCGGAAGAA GAGA TTA TCTC TTTTTGTAAGAAAGT TERM 147 183205 - 183226 + G 74 -7.3 -3.98159 | TGGTGAAAATAATTT TGAATCAGG CATT CCTGAATCA TTTAATGTTATGATA rpoB 179174 - 183295 + | DNA-directed RNA polymerase subunit beta TERM 148 183291 - 183275 - f 74 -9.5 -2.84878 | overlap 183274 TGTCTTAACGTAAAG CTTGAAG TAA CTTCAAG TTAAGAAAGACAGGT TERM 149 183315 - 183340 + F 100 -10.7 -4.30978 | opp_overlap 183315 GACAGGTCATTTAAA CAGATAAAAAA CTTG TTTTTTATCTG TTTTACTAGATTCCC TERM 150 183340 - 183315 - f 90 -10.7 -3.66378 | opp_overlap 183315 GACAGGTCATTTAAA CAGATAAAAAA CTTG TTTTTTATCTG TTTTACTAGATTCCC TERM 151 183368 - 183351 - f 85 -11.3 -2.78463 | ATCTGTTTTACTAGA TTCCCGC TTTT GCGGGAA TGACATATAGGGTGC rpoC 183553 - 187671 + | DNA-directed RNA polymerase subunit beta' TERM 152 188045 - 188017 - T 100 -16.3 -6.24157 | opp_overlap 188017 ATTGACAAAAAAAAA GCCTATAAAAAAC CAA GTTTTTTATAGGC TTTTTCTTATTGCCC TERM 153 188017 - 188045 + T 100 -16.3 -5.29445 | opp_overlap 188017 ATTGACAAAAAAAAA GCCTATAAAAAAC CAA GTTTTTTATAGGC TTTTTCTTATTGCCC RC0183 189239 - 188079 - | hypothetical protein TERM 154 188598 - 188610 + g 71 -7.7 -3.52358 | CTCTGTTTCAAGATT TGCTG ATG CAGCA TTGACTTTTTCTTCA TERM 155 189936 - 189948 + G 70 -4.1 -5.00884 | overlap 189935 AATCAAAAAATTAAT TGCTG AAG CAGTA TTTTTTACAAGAGAT pepA 189403 - 190905 + | leucyl aminopeptidase TERM 156 190951 - 190978 + F 74 -9.2 -2.8092 | gap 1, overlap 190975 GATACCGAGTCGTCA TTGCGA-GCAGCC TTA GGCTGCGTGGCAA TCTCGTCAAATATTC TERM 157 191179 - 191194 + G 73 -7.6 -3.58199 | ATGAGAAAGGCGGAG CAGGTA AAAC TACCTG TTCTATGCATTTAAT RC0185 191124 - 191924 + | hypothetical protein RC0186 192007 - 192441 + | hypothetical protein TERM 158 193897 - 193919 + G 81 -10.6 -2.90496 | overlap 193894 AGCCATAATCCGTTT TCTATGCCGC AGG GCGGAATAGA TGCTTTAGAGCAAGC TERM 159 194290 - 194278 - g 77 -7.7 -4.02334 | overlap 194287 TATGTAGAGGATAAA GCTCT AAA AGAGC TAAGCATTATGCTCT aspS 192493 - 194340 + | aspartyl-tRNA synthetase RC0188 196732 - 194618 - | hypothetical protein TERM 160 194970 - 194990 + g 79 -3.3 -5.55855 | opp_overlap 194973, overlap 194971 TTCTTTATACCCTTA ATATCTTGC TCG GTAAGATAA TTTTCTTTTTTTAGC TERM 161 196469 - 196493 + g 74 -2.2 -5.70522 | TATTTCCCTTAATTT CTTGTTTTTA TCTCC TGGAAACGAG TTTTTTATTATTGTT TERM 162 196955 - 196932 - R 70 -8.2 -3.07816 | overlap 196935 TCGGTATCCACGCAA CAATGCCACG TGGG CATGACATTG AATAAGTTTTTGAAG TERM 163 197002 - 196983 - R 72 -7 -4.15788 | overlap 196984 AAGCCGTGCAACAAA GCCCCCGC TTTT GCGGGGAT ATGACATCCAGGTCT TERM 164 197001 - 196984 - R 81 -10.5 -3.08991 | overlap 196983 AGCCGTGCAACAAAG CCCCCGC TTTT GCGGGGA TATGACATCCAGGTC RC0189 197824 - 197114 - | hypothetical protein TERM 165 197538 - 197526 - G 73 -9.1 -2.95388 | TATGCAAGCGACATA CCGGT TAA ACCGG CATAAACCCAAAATA dapB 198755 - 197898 - | dihydrodipicolinate reductase RC0191 199381 - 198902 - | hypothetical protein yqiX 200091 - 199366 - | amino acid ABC transporter substrate binding protein gatB 201799 - 200348 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 166 200663 - 200689 + g 80 -9.6 -3.47226 | overlap 200670 TAATTTTACCAGTTT TGCAAAGTTACT AGG GGTAATTTTGCA TTCATTGATTCCTAT gatA 203283 - 201802 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 167 203110 - 203122 + g 80 -9.1 -3.65542 | overlap 203109 AGCATACTTTTGATC GGCTG CTT CAGCC TGTTTTAAAGCTAAG gatC 203588 - 203286 - | aspartyl/glutamyl-tRNA amidotransferase subunit C RC0196 204065 - 203892 - | hypothetical protein frr 204940 - 204380 - | ribosome recycling factor TERM 168 204638 - 204627 - G 70 -7.2 -3.64703 | opp_overlap 204634 CTTTCTTCAGTTAAA GCCG GTAT CGGC AGTCTGATTAATTGA TERM 169 205078 - 205112 + r 100 -11.1 -5.31456 | opp_overlap 205077 205080 205088, overlap 205088 TTTGACGAAGCAATC TAGTAAAAAATTCTG ATCTA CAGAATTTTTTATTA TTTTTTCTAGATTGC TERM 170 205088 - 205102 + r 88 -4.3 -5.80727 | opp_overlap 205080 205077 205088, overlap 205078 CAATCTAGTAAAAAA TTCTG ATCTA CAGAA TTTTTTATTATTTTT TERM 171 205102 - 205088 - R 75 -4.3 -5.18357 | opp_overlap 205088 205078, overlap 205080 205077 CAATCTAGTAAAAAA TTCTG ATCTA CAGAA TTTTTTATTATTTTT pyrH 205969 - 205229 - | uridylate kinase TERM 172 205542 - 205532 - G 85 -8.2 -4.37092 | ATCGGTTGTACAAAA CGGG TTA CCCG TACCGCCGGCAAAAA RC0199 206289 - 205966 - | putative monovalent cation/H+ antiporter subunit E emrB 207832 - 206273 - | multidrug resistance protein B TERM 173 207476 - 207445 - G 80 -5.2 -5.1286 | gap 1 GAAAAAGTATAAAAA CGGTACTA-AAGACC GTC GGTATCATAGCACCG CCAAAAAAGCCTTGT TERM 174 207791 - 207780 - G 83 -4.4 -5.59357 | opp_overlap 207780, overlap 207789 ACCATACCAAAAAAA GCAA ATAA TTGC TTTTTAGAAAGAGCA RC0201 208063 - 208266 + | hypothetical protein omp1 211374 - 209068 - | outer membrane protein omp1 TERM 175 211485 - 211465 - R 70 -8.3 -3.15458 | overlap 211463 AAATAATAAATTAGA TACCGCG TTCAAGT CGCGGTA TGACAAAGAACTGGA RC0203 212689 - 211613 - | hypothetical protein nusB 212971 - 213441 + | transcription antitermination protein NusB ftsJ 213576 - 214259 + | cell division protein ftsJ RC0206 215371 - 214310 - | hypothetical protein TERM 176 215397 - 215409 + H 82 -6.3 -5.24531 | opp_overlap 215397 TTTTGATCAATATTA CCATA AAA TATGG TTTTTTCTAAAAAAT TERM 177 215431 - 215471 + H 86 -10.1 -3.86445 | opp_overlap 215446, overlap 215425 215436 CTAAAAAATGTCAAG TCAAATATTAATCTATTAT TAA ATAAAGGATTGATATTTGA TTACTTTTGTTATAT RC0207 215542 - 216495 + | hypothetical protein TERM 178 216549 - 216520 - T 90 -10.9 -3.61219 | opp_overlap 216520 ACAAAACTTTCTAAA GAGTAAGGTTATA GATC TCTAACCTTACTC TTTTTTATTTAATAA TERM 179 216520 - 216549 + T 100 -10.9 -5.68438 | opp_overlap 216520 ACAAAACTTTCTAAA GAGTAAGGTTATA GATC TCTAACCTTACTC TTTTTTATTTAATAA RC0208 216994 - 216554 - | hypothetical protein TERM 180 216696 - 216720 + g 80 -6.4 -4.74706 | opp_overlap 216687 AATGCAGTTCCTGCC GTGCATGGCA CAAAT TGCCAAGTAC TTTTTAAATATTCAA RC0209 217275 - 216994 - | hypothetical protein TERM 181 217483 - 217470 - gR 72 -5.3 -4.72846 | opp_overlap 217460, overlap 217460 CGATATAGGTAAAAA TAACC TATC GGTTA GACTTAAAGAACAGT RC0210 217249 - 218022 + | hypothetical protein TERM 182 218094 - 218067 - TR 74 -9.2 -2.80113 | gap 1, overlap 218034 TATGATTTCATGAGA TTGCCACGCAGCC TAC GGCTGC-TCGCAA TGACGAAAAGGTAGA acrD 221628 - 218602 - | acriflavin resistance protein D TERM 183 219521 - 219547 + g 74 -6.6 -4.22041 | overlap 219522 219528 CGGTTGACTTCTATA CTTATAGTCGGC ATT GCCGATTGTAAA TTTCTATTGACGTTT TERM 184 219522 - 219546 + g 81 -10.1 -3.1214 | overlap 219521 219528 GGTTGACTTCTATAC TTATAGTCGGC ATT GCCGATTGTAA ATTTCTATTGACGTT TERM 185 219528 - 219540 + g 78 -9.1 -3.51721 | overlap 219522 219521 CTTCTATACTTATAG TCGGC ATT GCCGA TTGTAAATTTCTATT TERM 186 220051 - 220067 + g 71 -8.1 -3.29591 | opp_overlap 220048 AATGATGACAAATTT CTTTTGA TTG TCAAAAG TTAGCTTTAGATAGT TERM 187 220508 - 220496 - G 74 -6.3 -4.46854 | ATAGAAAATCCAAAA GCATA CAT TATGC TAAAAGTACCGATCA TERM 188 221564 - 221550 - G 86 -4.2 -5.75342 | overlap 221552 GTTTGGTAAAAAAAA TTGCTC CAA GAGCTA CGATAACCAAATTCA hupA 222017 - 222436 + | DNA-binding protein HU TERM 189 222541 - 222509 - f 80 -6.3 -4.95155 | GTGACACTAGAAAAA CCAGCTCATGCAA TAATGCT TTGCAAAAGCCGG AATGATATAGAATAC holB 222576 - 223385 + | DNA polymerase III subunit delta' ffh 223586 - 224935 + | signal recognition particle protein TERM 190 225031 - 225056 + T 70 -4.1 -4.91712 | ATTTTATCAAGTATG TAACTTCTGTA GCAA TATTGAAGTTA TTTTTCTGGATTCCC RC0215 225932 - 225636 - | putative prolyl endopeptidase RC0216 226321 - 225956 - | putative prolyl endopeptidase TERM 191 226415 - 226440 + r 76 -9.9 -2.69151 | gap 1, overlap 226406 226411 TTAAGCTAGCTTTAT CGCT-ATCTTCT TTT AGAAGATCAGCG TAGTGTATGGCAACA TERM 192 226621 - 226603 - R 72 -6.2 -4.21194 | CTTTAGTATCTAAAA TATAATTA TCG TAATTATA AAAAGCCTTATTTGC RC0217 226809 - 226648 - | putative prolyl endopeptidase TERM 193 226887 - 226905 + r 75 -4.6 -5.02476 | TAATTTCCCGCTACT TGTTTTTG GCT CAAAACCA TTTTTTACAAAATCT RC0218 227494 - 226910 - | putative prolyl endopeptidase TERM 194 228268 - 228253 - g 71 -5.4 -4.61824 | CAAGAAGAATTAAAA CAAGCT ATGC AGCTCG CTACCTCACATATTT hemN 227671 - 228873 + | coproporphyrinogen III oxidase TERM 195 229446 - 229436 - T 70 -5.4 -4.65916 | GTCATTGCAAGAAAA TTGC ATA GCAA TTGACGAAGTAAGGA TERM 196 229486 - 229472 - T 82 -4.3 -5.50925 | opp_overlap 229472 AAGGAAGAGAAAAAA TTCTG ATTTA CAGAA ATTTTTGTGTTATTT TERM 197 229514 - 229535 + T 74 -8.1 -3.62522 | gap 1, overlap 229516 TTTTTTGGGGAGTGC CAT-GCAGTC TAC GACTGCGATG TTGTTAGCCCGATTA TERM 198 229516 - 229532 + T 70 -8.7 -2.63073 | overlap 229514 TTTTGGGGAGTGCCA TGCAGTC TAC GACTGCG ATGTTGTTAGCCCGA RC0220 229716 - 229522 - | hypothetical protein RC0221 230050 - 229730 - | hypothetical protein TERM 199 229918 - 229928 + g 75 -2.6 -5.53991 | CGTCATAGGGAGTCA TTAT ATT ATAA TTTTTTTGATCGATA RC0222 230432 - 230244 - | hypothetical protein gltP 231682 - 230483 - | proton/sodium-glutamate symport protein TERM 200 230692 - 230672 - G 73 -8.2 -3.4914 | overlap 230670 230685 AAGCATTATCAAAGA GGCACCGG GAATA CCGGCACC ACCGATAGATCCAAG TERM 201 231270 - 231260 - G 77 -4 -5.38348 | AAAAATAGCAAAAAA TACA ACT TGTA AGACATCACCGTTTG TERM 202 231346 - 231330 - G 74 -2.3 -5.65177 | ATATTTACAAAAAAA TCAATTA TAT TAAATGA AGTTCTGTTTGTCGT TERM 203 231462 - 231472 + g 77 -8.2 -3.77464 | opp_overlap 231462 GTAGTACCTAAAAAA GCGG CTA CCGC TTTCATGCCTACTCT TERM 204 231472 - 231462 - G 91 -8.2 -5.1101 | opp_overlap 231462 GTAGTACCTAAAAAA GCGG CTA CCGC TTTCATGCCTACTCT cutA 232037 - 231723 - | periplasmic divalent cation tolerance protein RC0225 232558 - 232040 - | hypothetical protein TERM 205 232615 - 232588 - R 74 -9.2 -2.80113 | gap 1, opp_overlap 232583 232582, overlap 232555 TATGATTTCATGAGA TTGCCACGCAGCC TAC GGCTGC-TCGCAA TGACAATTTTTTACA sucB 233813 - 232626 - | dihydrolipoamide acetyltransferase TERM 206 233891 - 233933 + r 70 -5.6 -4.2828 | gap 1, opp_overlap 233898 233902, overlap 233892 AGACGCTATAAGGGT CGA-CGAAGCAATCTCAGG CAAATT CCTGAGATTGCCACGCTCC TTTTAGTCGCTCGCA TERM 207 233892 - 233932 + r 76 -9.1 -3.16647 | gap 1, opp_overlap 233898 233902, overlap 233891 GACGCTATAAGGGTC GA-CGAAGCAATCTCAGG CAAATT CCTGAGATTGCCACGCTC CTTTTAGTCGCTCGC TERM 208 233925 - 233898 - R 100 -14.3 -3.15758 | opp_overlap 233892 233891, overlap 233902 ATAAGGGTCGACGAA GCAATCTCAGG CAAATT CCTGAGATTGC CACGCTCCTTTTAGT TERM 209 233921 - 233902 - R 71 -7.9 -3.39895 | opp_overlap 233892 233891, overlap 233898 GGGTCGACGAAGCAA TCTCAGG CAAATT CCTGAGA TTGCCACGCTCCTTT kgd 236764 - 233978 - | alpha-ketoglutarate decarboxylase RC0228 238388 - 236898 - | thermostable carboxypeptidase TERM 210 238460 - 238435 - R 100 -10.7 -4.30978 | opp_overlap 238435 GGGAATCCAGTAAAA CCTATAAAAAA CTTG TTTTTTATAGG TTTATTTGTTAATTA TERM 211 238435 - 238460 + r 100 -10.7 -4.73297 | opp_overlap 238435 GGGAATCCAGTAAAA CCTATAAAAAA CTTG TTTTTTATAGG TTTATTTGTTAATTA recN 240202 - 238565 - | DNA repair protein RecN TERM 212 239554 - 239581 + g 83 -5.7 -5.29445 | overlap 239557 AATCCTTATCTTTAT TTTGCAAATCT TTTCGT AGATTTGCTAA TTTTTCTTCTTCACC TERM 213 239943 - 239975 + g 90 -4.9 -5.80003 | opp_overlap 239943 239942, overlap 239945 TTTACAAACAATAAC TCTTCAGGTTCAATA AAA TTTTGAACCAGAAAA TTTTTTATTTCTTCA RC0230 240965 - 240210 - | hypothetical protein TERM 214 241221 - 241236 + r 85 -2.6 -5.93809 | CTACCCAATGTCCTT TATCAT TTTT ATGGTA TTTTTTTTCTACGGC RC0231 241368 - 241198 - | putative cation transport regulator ChaB dnaJ 242626 - 241505 - | dnaJ protein dnaK 244638 - 242755 - | molecular chaperone DnaK TERM 215 242936 - 242967 + g 70 -8 -3.0558 | opp_overlap 242934 242945 TCCGACTCAAGCACG GCTTTTAAAGCGGC TAGT GCTGCTTCAACAGC TCCTTTATCGTCTGA TERM 216 243270 - 243254 - G 87 -10.9 -3.53811 | opp_overlap 243252 TCTATTTGTGGCAAA CCTCTTG GTG CAAGAGG TATACCTTCGAGATT TERM 217 244878 - 244866 - g 72 -9.1 -2.68223 | overlap 244865 GATCGATACTAGAAT TGCCG TAT CGGCA TATGACGATACAAGT RC0234 244702 - 246195 + | heat shock protease RC0235 247010 - 247210 + | hypothetical protein TERM 218 247239 - 247279 + T 74 -9.3 -2.88758 | opp_overlap 247237, overlap 247228 247231 TATCGGACAAGCATT TTCCTTGTAAATTTAACAT AGA GTATTAGATTTGCAAGGAA TATATAGAGAGTTCT TERM 219 247328 - 247306 - T 100 -9.2 -5.4505 | opp_overlap 247305 TTCTTTAATAAAAAA CGGTAAGTAT GTA AAACTTACCG ATTAAATTTAAAGCT RC0236 247698 - 247351 - | hypothetical protein RC0237 247866 - 248339 + | hypothetical protein holA 248347 - 249321 + | DNA polymerase III subunit delta coq7 249456 - 249995 + | ubiquinone biosynthesis protein coq7 TERM 220 250729 - 250741 + G 74 -6.3 -4.3587 | CTGCAGGGATTATTT CAGTA GGT TACTG TTTATATTCTTGGTG coxC 250470 - 251396 + | cytochrome c oxidase subunit III RC0241 251552 - 251911 + | hypothetical protein TERM 221 251967 - 251942 - T 100 -14.9 -3.16191 | opp_overlap 251942 TTATATCTTTAGTAA TACCCATAAGC GTTG GCTTATGGGTA TTTTTATTTTTAAGT TERM 222 251942 - 251967 + T 100 -14.9 -5.63236 | opp_overlap 251942 TTATATCTTTAGTAA TACCCATAAGC GTTG GCTTATGGGTA TTTTTATTTTTAAGT TERM 223 252096 - 252065 - T 90 -7.6 -5.12068 | opp_overlap 252069, overlap 252069 CATATTTAATAAAAA TAAACATATAAAAA CTTG TTTTTATATGTTTT ACTGGATTCCGCCTA TERM 224 252069 - 252092 + T 81 -8.4 -4.30978 | opp_overlap 252069 252065 TTTAATAAAAATAAA CATATAAAAA CTTG TTTTTATATG TTTTACTGGATTCCG TERM 225 252092 - 252069 - T 93 -8.4 -5.05606 | opp_overlap 252069, overlap 252065 TTTAATAAAAATAAA CATATAAAAA CTTG TTTTTATATG TTTTACTGGATTCCG RC0242 252887 - 252255 - | hypothetical protein TERM 226 253022 - 252985 - g 82 -7.9 -4.49556 | opp_overlap 252984 CTCTTATTAAAGAAA TTGAAGAAGCTTGGC AAATTAAG GACAAACTTCTTCAA GATTCTTCAAAGCTT dapD 252963 - 253787 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 227 253925 - 253902 - T 90 -8.4 -4.87892 | opp_overlap 253902, overlap 253886 GTTTAACAAAATAAA CATATAAAAA TAAA TTTTTATATG TTTTACTGGATTCCG TERM 228 253902 - 253925 + T 81 -8.4 -4.30978 | opp_overlap 253886 253902 GTTTAACAAAATAAA CATATAAAAA TAAA TTTTTATATG TTTTACTGGATTCCG RC0244 254409 - 254086 - | hypothetical protein RC0245 254986 - 254789 - | hypothetical protein RC0246 255381 - 255082 - | hypothetical protein RC0247 255526 - 255368 - | hypothetical protein RC0248 255715 - 255563 - | hypothetical protein pbpC 258120 - 255730 - | bifunctional penicillin-binding protein 1C TERM 229 255769 - 255783 + g 71 -8.6 -2.83641 | ACTGTCGCTTTCGCC GCTATC GCT GATAGC TCTAATAATAAATTC TERM 230 257239 - 257253 + g 72 -8.6 -3.08726 | overlap 257238 AATAAGAATTACGGA GGCATT ATT AATGCC ATATTTTTTCCGATC TERM 231 258899 - 258884 - g 71 -7.6 -3.46359 | overlap 258882 AATAACGCAATAATA GAAGTC ACTA GACTTC AAGCAGTTGTTCCTG RC0250 258698 - 258994 + | hypothetical protein RC0251 259239 - 259442 + | hypothetical protein RC0252 259449 - 259643 + | hypothetical protein RC0253 259731 - 260000 + | hypothetical protein RC0254 260055 - 260336 + | hypothetical protein TERM 232 261122 - 261107 - g 81 -3.2 -5.75342 | opp_overlap 261115, overlap 261109 TTTTCCTAAAAAAAA TACTGC GGTT GCAGTG GCAGTAGCTTATATT TERM 233 261120 - 261109 - g 72 -5.8 -4.52949 | opp_overlap 261115, overlap 261107 TTCCTAAAAAAAATA CTGC GGTT GCAG TGGCAGTAGCTTATA RC0255 260988 - 261203 + | hypothetical protein TERM 234 261983 - 261964 - gf 100 -9.4 -4.59944 | AGTAGTACAAATAAA TCAGAATC TAAG GATTCTGA AGTTAGCCTTGCAAA RC0256 261436 - 262359 + | hypothetical protein RC0257 262278 - 262550 + | hypothetical protein TERM 235 263020 - 263006 - T 75 -4.3 -5.18357 | opp_overlap 263006 CAATCCAGTAAAAAA TGCTA ATTTA TAGCA TTTTTTTTTATTTTT TERM 236 263006 - 263020 + T 100 -4.3 -6.60239 | opp_overlap 263006 CAATCCAGTAAAAAA TGCTA ATTTA TAGCA TTTTTTTTTATTTTT RC0258 263572 - 263126 - | hypothetical protein RC0259 264574 - 263582 - | hypothetical protein RC0260 265598 - 264528 - | hypothetical protein TERM 237 265365 - 265392 + gr 70 -8.6 -2.6652 | opp_overlap 265361, overlap 265361 TAGGACAATATTTTC GCATGTAAATTC TTTA GAATTTACATGA TCAATTAATTTTACT fdxB 265949 - 265611 - | ferredoxin hscA 267800 - 266013 - | chaperone protein HscA TERM 238 266612 - 266593 - G 80 -9.4 -3.52896 | opp_overlap 266585 266581 TGATTATCGACATAA GTCGTAAA TTCT TTTACGAC CGAAATAGGAATCGG hscB 268291 - 267791 - | co-chaperone HscB rnhB 268353 - 268934 + | ribonuclease HII RC0265 269078 - 268899 - | hypothetical protein TERM 239 268966 - 268993 + g 73 -9.2 -2.80113 | gap 1, opp_overlap 268962 GACACTGAATAGTCA TTGCGA-GCAGCC ATA GGCTGCGTGGCAA TCTCATGAAATAATA TERM 240 269109 - 269119 + r 70 -5.4 -4.68593 | CAACTCGAGTGCCGC CTCT TCT AGAG TTTTTAGCTGATCAC uvrB 271073 - 269088 - | excinuclease ABC subunit B TERM 241 270453 - 270432 - G 79 -6.7 -4.68593 | gap 1, opp_overlap 270431 TTCATTACCGAAAAA CGATAAACGC CAA GC-TTTATCG CTGTAATGTGAGGGG grxC1 271144 - 271452 + | glutaredoxin 3 RC0268 271512 - 271868 + | putative multidrug resistance protein (Atm1) RC0269 271953 - 272153 + | putative multidrug resistance protein (Atm1) TERM 242 272224 - 272212 - f 71 -5.5 -4.37871 | GGAAATAAAACCAAA GCGAT AAC ACCGC CAATAATAGAGCAAT RC0270 272417 - 272974 + | putative multidrug resistance protein (Atm1) RC0271 273125 - 273352 + | putative multidrug resistance protein (Atm1) TERM 243 273584 - 273572 - f 90 -4.8 -5.71983 | GCAATGACAAAAAAA CTGC TCCAC GCAG GAATGACATGGATAG TERM 244 273782 - 273759 - f 72 -8.3 -3.37056 | opp_overlap 273773 AGTAGCTATGTACAA GGTTTAAAG TGTAAG CTTTAAACC TAAAAGCTATTATAA RC0272 273816 - 274067 + | hypothetical protein TERM 245 274285 - 274268 - f 80 -9.9 -3.25177 | overlap 274266 274264 GCTTAAAAAACTAGA TTCCTGC TTTC GCAGGAA TGACATCAGCATCCG gyrA 274436 - 277153 + | DNA gyrase subunit A TERM 246 277321 - 277278 - f 100 -12.5 -4.11216 | gap 1, opp_overlap 277277 277278, overlap 277279 277282 CGTGGACCGGTAAAA CCCACTGTGTCACCCCGTGG TCAAG CCACGGGATGACAGAG-GTG AAATTGCTTCACGCA TERM 247 277322 - 277279 - f 100 -13.3 -3.06515 | gap 1, opp_overlap 277278 277277, overlap 277278 277282 GTGGACCGGTAAAAC CCAC-TGTGTCACCCCGTGG TCAAG CCACGGGATGACAGAGGTGA AATTGCTTCACGCAA TERM 248 277318 - 277282 - f 100 -17.4 -2.75081 | opp_overlap 277278 277277, overlap 277278 277279 GACCGGTAAAACCCA CTGTGTCACCCCGTGG TCAAG CCACGGGATGACAGAG GTGAAATTGCTTCAC RC0274 277731 - 278051 + | hypothetical protein RC0275 278248 - 278538 + | hypothetical protein RC0276 278869 - 279054 + | hypothetical protein RC0277 279296 - 279081 - | hypothetical protein def 279505 - 280032 + | peptide deformylase TERM 249 280362 - 280390 + G 75 -9.5 -2.80074 | opp_overlap 280371 CCATCCGATTTGCCT CGTCACAGAGGAG CGG CTCCTCTGCAGCG TACTATTATAGAGGG fmt 280029 - 280940 + | methionyl-tRNA formyltransferase RC0280 281122 - 281538 + | hypothetical protein TERM 250 281759 - 281746 - f 72 -2.5 -5.4593 | opp_overlap 281746 TGAAAATAAGAAAAA TAATT GTGA AATTA ATTCTGTATGCATTG TERM 251 284946 - 284958 + F 74 -7.7 -3.84278 | TAAGTCGCTGCCAAG CTTGC AAT GCAAG TTGTTAATTACCTTT RC0281 285348 - 286025 + | hypothetical protein n2B 287125 - 286073 - | putative ATPase n2B TERM 252 286461 - 286482 + g 71 -3.1 -5.1361 | opp_overlap 286459 286471, overlap 286459 286471 TGAGGAGCAAGATTA TTATCAC TAATATCT GTGATAA TTTTTTCAAGTTTGT TERM 253 287254 - 287282 + r 100 -9.1 -4.4831 | opp_overlap 287214 287261, overlap 287261 GACCACGGGATCCAG TGAAAAATGCTAA CCT TTAGCATTTTTTG TTATTTTTGCTAGAT TERM 254 287275 - 287261 - R 81 -7.2 -4.67353 | opp_overlap 287254 287261 GGATCCAGTGAAAAA TGCTAA CCT TTAGCA TTTTTTGTTATTTTT TERM 255 287261 - 287275 + r 95 -7.2 -5.80727 | opp_overlap 287261, overlap 287254 GGATCCAGTGAAAAA TGCTAA CCT TTAGCA TTTTTTGTTATTTTT queA 288437 - 287340 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase RC0284 288604 - 288807 + | hypothetical protein RC0285 289197 - 289589 + | hypothetical protein abcT3 291426 - 289657 - | multidrug resistance ABC transporter ATP-binding protein TERM 256 290045 - 290058 + g 73 -8.1 -3.50869 | ACATCATGAATATGT GCAGC TTTT GCTGC TTCTATAACCTCCTC TERM 257 290310 - 290325 + g 80 -7.6 -4.32177 | CTACTTTTTGTTTAC TCGGTA TTAA TACCGA TTTATTATAAAATAG TERM 258 291412 - 291381 - G 73 -4.6 -5.05153 | ATTTTAAAAAATAAA TACTTAAGCTAAAT GTTG ATTTAGATAAAGTA GGGTATTTTATCACG RC0287 291606 - 291878 + | hypothetical protein TERM 259 293221 - 293210 - g 74 -5.8 -4.67556 | ATAATATTTTAAAAA CCGT GGAT ACGG TATCACCGGTACTCG cydA 292033 - 293403 + | cytochrome d ubiquinol oxidase subunit I cydB 293411 - 294430 + | cytochrome d ubiquinol oxidase subunit II RC0290 294566 - 294874 + | hypothetical protein RC0291 294885 - 295145 + | hypothetical protein TERM 260 295586 - 295570 - g 100 -8.1 -5.55769 | TTGTATAATAAAAAA TTTGCAA GCT TTGCAAA TACCGTAAATAGTAC lgtF 295138 - 295986 + | beta 1,4 glucosyltransferase mpp 296063 - 297301 + | mitochondrial protease TERM 261 298146 - 298132 - g 71 -8.6 -2.90075 | opp_overlap 298129 298132 GGTTTTTGAATCATA TCAGCT AAT AGCTGA TCGTTTAAAAGAAAA TERM 262 298132 - 298146 + G 71 -8.6 -2.90496 | opp_overlap 298132, overlap 298129 GGTTTTTGAATCATA TCAGCT AAT AGCTGA TCGTTTAAAAGAAAA purC 297455 - 298165 + | phosphoribosylaminoimidazole-succinocarboxamide synthase RC0295 298385 - 299971 + | hypothetical protein TERM 263 300015 - 299968 - f 100 -13.1 -3.71527 | overlap 299964 AGATCAAGAAAGCAA GTAG-TCTAAGTGTCATTCCTGC AAAA GCAGGAATGACA-TAAGAGCTAC GAGATAAGGTCTACA TERM 264 300937 - 300927 - g 79 -6.8 -4.62904 | opp_overlap 300918 AAAGATTCGTAAAAA CGGT TAT ACCG AAGTTAAGACTCCTG thrS 300067 - 301974 + | threonyl-tRNA synthetase TERM 265 302140 - 302129 - g 81 -3 -5.8187 | TATCCAAGAAAAAAA TATC AAGA GATA AAATTATTGGGCAAG RC0297 302062 - 302286 + | hypothetical protein RC0298 302539 - 302925 + | hypothetical protein RC0299 302858 - 303130 + | hypothetical protein RC0300 303367 - 303543 + | hypothetical protein RC0301 303830 - 304225 + | multidrug resistance ABC transporter ATP-binding protein RC0302 304532 - 304332 - | hypothetical protein RC0303 304912 - 304706 - | hypothetical protein TERM 266 305212 - 305202 - R 70 -4 -4.87133 | opp_overlap 305202, overlap 305197 ATGCTTTAAAGAAAA GTAT AAA ATAC TACTTTTCAAAGAAA RC0304 305648 - 305232 - | hypothetical protein TERM 267 305520 - 305547 + g 84 -3.6 -5.82316 | gap 1, opp_overlap 305522, overlap 305522 305534 ATTTGGCGAATCATC AATATTACCT-CT TTC AGCAGGTAATATA TTTTTTTTACGTGCT TERM 268 305522 - 305545 + g 76 -6.2 -4.5536 | gap 1, opp_overlap 305522, overlap 305520 305534 TTGGCGAATCATCAA TATTACCT-CT TTC AGCAGGTAATA TATTTTTTTTACGTG RC0305 306327 - 305845 - | hypothetical protein tolC 307039 - 308400 + | outer membrane protein tolC precursor RC0307 308402 - 308800 + | hypothetical protein RC0308 309017 - 310729 + | hypothetical protein gyrB1 310939 - 312927 + | DNA topoisomerase IV subunit B ctp 313004 - 314413 + | tail-specific protease precursor TERM 269 315150 - 315160 + G 71 -5.4 -4.72497 | AGTGATTTAACAGTG GAAG AGG CTTC TTTTGTTACTAGCTA barA 314628 - 316121 + | histidine kinase sensor protein TERM 270 316834 - 316806 - g 100 -6.8 -5.95166 | opp_overlap 316806 GCGAACTAAAAAAAA CTCAGGAAGCAT GTAAT ATGCTTGCTAAG TTTGATAAGGAATTT RC0312 316187 - 316924 + | hypothetical protein RC0313 316937 - 317599 + | hypothetical protein RC0314 317622 - 318866 + | hypothetical protein rplM 318959 - 319426 + | 50S ribosomal protein L13 rpsI 319433 - 319912 + | 30S ribosomal protein S9 TERM 271 320348 - 320373 + F 71 -4.7 -4.75404 | opp_overlap 320353 ATGGGGGTGAGTTTA CTATAGTACTG TTAA CAGTCCCATAG TTTTTAATAAAATTT RC0317 320651 - 320851 + | putative D-alanyl-D-alanine dipeptidase RC0318 321190 - 321351 + | putative D-alanyl-D-alanine dipeptidase RC0319 321460 - 321753 + | hypothetical protein invA 322632 - 322147 - | dinucleoside polyphosphate hydrolase pleD 324009 - 322657 - | response regulator PleD efp 324085 - 324651 + | elongation factor P TERM 272 324686 - 324713 + F 74 -9.2 -2.80443 | gap 1, overlap 324710 GATACCACCCCGTCA TTGCGA-GCAGCC GTA GGCTGCGTGGCAA TCTCGTCAAATATCC suhB 324873 - 325619 + | extragenic suppressor protein suhB RC0324 325691 - 326014 + | hypothetical protein psd 326048 - 326743 + | phosphatidylserine decarboxylase TERM 273 327554 - 327564 + G 71 -5.4 -4.56607 | ATTAATATATATTTG GCTA TTA TAGC TTTTCTACTTGCTAG pssA 327005 - 327769 + | CDP-diacylglycerol--serine O-phosphatidyltransferase emrA 327763 - 328830 + | multidrug resistance protein A RC0328 329845 - 329642 - | hypothetical protein bolA 330084 - 329842 - | morphology/transcriptional regulatory protein BolA RC0330 330139 - 331365 + | hypothetical protein TERM 274 332228 - 332238 + GF 74 -6.8 -4.27796 | overlap 332236 TTTATTACTAATTTG CCGT TTT ACGG TTTTGCCGTTTGTTG murC 331586 - 333043 + | UDP-N-acetylmuramate--L-alanine ligase murB 333015 - 334151 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 275 334240 - 334215 - f 89 -9.3 -4.30978 | opp_overlap 334215 GGGAATCCAGTAAAA CATATAAAAAA CAAG TTTTTTATATG TTTATTTTATAATAT TERM 276 334215 - 334240 + F 100 -9.3 -4.81357 | opp_overlap 334215 GGGAATCCAGTAAAA CATATAAAAAA CAAG TTTTTTATATG TTTATTTTATAATAT TERM 277 334257 - 334282 + F 80 -6.3 -4.87665 | opp_overlap 334260 TTATTTTATAATATG TAACTTCTATA TCAA TATTGAAGTTA TTTTTCTGGATCCCC TERM 278 334299 - 334324 + F 70 -5.3 -4.61231 | TTTTCTGGATCCCCG CCTACGCGGGG ATGA CATCGAGTAGG TTTTTCGAGCTATGC ddl 334395 - 335360 + | D-alanine--D-alanine ligase TERM 279 335472 - 335450 - g 72 -3.5 -5.31456 | opp_overlap 335450 CTAATGTACAAAAAA GCAATATTA GGGCT TAAGATTGC TTTAATTATCTTTGT ftsQ 335357 - 336160 + | cell division protein ftsQ TERM 280 336473 - 336449 - g 100 -10.1 -5.13473 | opp_overlap 336448 336449 336449 ATCAGATTTAAAAAA TGCTGAAACTA GCA TTGTTTCAGCA ATTTACGCACTTGAA TERM 281 336449 - 336473 + G 77 -10.1 -2.74322 | opp_overlap 336449, overlap 336449 336448 ATCAGATTTAAAAAA TGCTGAAACTA GCA TTGTTTCAGCA ATTTACGCACTTGAA ftsA 336288 - 337523 + | cell division protein ftsA TERM 282 337595 - 337551 - T 72 -6.6 -4.13767 | gap 1, overlap 337552 337555 CGTTGGACTGGAAAA TGCATTTAGTGTCATTCCCGC TTCC GTGGGAATGACATAAAATG-A TCCACGCAACAATAC TERM 283 337595 - 337552 - T 70 -8.2 -3.08046 | overlap 337551 337555 GTTGGACTGGAAAAT GCATTTAGTGTCATTCCCGC TTCC GTGGGAATGACATAAAATGA TCCACGCAACAATAC TERM 284 337591 - 337555 - T 78 -10.4 -2.75577 | gap 1, overlap 337551 337552 GGACTGGAAAATGCA TTTAGTGTCATTCCCGC TTCC GTGGGAATGACA-TAAA ATGATCCACGCAACA RC0336 338142 - 337666 - | hypothetical protein TERM 285 338062 - 338050 - G 70 -6.3 -4.16033 | CCCAAAGAATAAGAA TCCAA TAC TTGGA ACTGTAAAGAATTCA cycM 338653 - 338126 - | cytochrome c TERM 286 338455 - 338470 + g 73 -9 -2.82519 | CAGTCTTCATTAATT CCGGTA TATT TACCGG TGCTTGCTCTAGTGC RC0338 338767 - 339837 + | hypothetical protein lpxC 340721 - 339846 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase RC0340 340752 - 340925 + | hypothetical protein RC0341 342216 - 341068 - | hypothetical protein rne 342642 - 344714 + | ribonuclease E TERM 287 344819 - 344835 + F 78 -6.7 -4.67353 | opp_overlap 344819 AAAAATAATAAAAAA TACTAAT AAT ATTAGTA TTTTTAGCTGGATCC TERM 288 344835 - 344819 - f 95 -6.7 -5.80727 | opp_overlap 344819 AAAAATAATAAAAAA TACTAAT AAT ATTAGTA TTTTTAGCTGGATCC TERM 289 345085 - 345095 + G 75 -8.2 -3.65832 | overlap 345084 345093 ATAGTTGAGTGGCGT CCGG TAA CCGG TATTTTGCCGCCTTT coxW 344965 - 345978 + | cytochrome c oxidase assembly protein rluC 345991 - 346902 + | ribosomal large subunit pseudouridine synthase C TERM 290 347626 - 347650 + G 79 -3.6 -5.67063 | opp_overlap 347628, overlap 347630 TATGATTATAGAAAA GGTGGCTAAA AAAGA TTTAGCTAAC TTTTTTTATGATGAA pbpE 347030 - 348238 + | penicillin-binding protein 4* TERM 291 349168 - 349206 + G 100 -14.6 -3.03619 | opp_overlap 349172, overlap 349171 GTGACTTTTAATTTA CAGATGTCATCCCGTGGT CAA GCCACGGGATGACAATAG TCTTAAGGAGTAATT TERM 292 349171 - 349203 + G 100 -17.1 -2.74192 | opp_overlap 349172, overlap 349168 ACTTTTAATTTACAG ATGTCATCCCGTGGT CAA GCCACGGGATGACAA TAGTCTTAAGGAGTA TERM 293 349202 - 349172 - g 100 -19.9 -2.94912 | opp_overlap 349171 349168 CTTTTAATTTACAGA TGTCATCCCGTGG TCAAG CCACGGGATGACA ATAGTCTTAAGGAGT xthA1 348340 - 349200 + | exodeoxyribonuclease III pdhA 349223 - 350203 + | pyruvate dehydrogenase e1 component, alpha subunit precursor TERM 294 351129 - 351118 - g 74 -3 -5.49729 | opp_overlap 351118 AATCAGTGAAAAAAA CTAA TCGT TTAG TTGTAGTGGAAGAAG pdhB 350364 - 351344 + | pyruvate dehydrogenase subunit beta bipA 353311 - 351482 - | GTP-binding protein RC0350 353460 - 353699 + | hypothetical protein RC0351 353678 - 354025 + | hypothetical protein TERM 295 354394 - 354370 - f 81 -10 -3.48276 | overlap 354372 CTGCCTGTGATACAA GATCCCGTGG TCAAG CCACGGGATG ACAATTCTAGCCGAT TERM 296 354392 - 354372 - f 100 -12.6 -3.31726 | overlap 354370 GCCTGTGATACAAGA TCCCGTGG TCAAG CCACGGGA TGACAATTCTAGCCG TERM 297 354800 - 354789 - g 70 -4.4 -4.90302 | overlap 354799 GATTAAGAAAACAAA GCTT GAAC AAGC CCACGCTGAGGCTAT RC0352 354436 - 354990 + | hypothetical protein TERM 298 355071 - 355046 - f 70 -4.1 -4.91712 | GGTAATCCAGAAAAA TAACTTCAATA TTGA TACAGAAGTTA CATATTTGATAAAAT TERM 299 355113 - 355090 - f 87 -8.4 -4.77775 | opp_overlap 355090 ATTTGATAAAATAAA TCTATAAAAA CTAG TTTTTATAGA TTTTACTGGATTCCC TERM 300 355090 - 355113 + F 81 -8.4 -4.30978 | opp_overlap 355090 ATTTGATAAAATAAA TCTATAAAAA CTAG TTTTTATAGA TTTTACTGGATTCCC TERM 301 355124 - 355141 + F 85 -11.3 -2.62184 | ATAGATTTTACTGGA TTCCCGC CTAC GCGGGAA TGATATAAACAAGAG icd 355167 - 356618 + | isocitrate dehydrogenase RC0354 356733 - 357053 + | putative monovalent cation/H+ antiporter subunit G TERM 302 357773 - 357749 - g 84 -10 -3.50869 | overlap 357751 CAGCAGGCGATACAA GATCCCGTGG TCAAG CCACGGGATG ACAAATCCAATAATA TERM 303 357771 - 357751 - g 90 -12.6 -3.32698 | overlap 357749 GCAGGCGATACAAGA TCCCGTGG TCAAG CCACGGGA TGACAAATCCAATAA RC0355 357117 - 358190 + | putative monovalent cation/H+ antiporter subunit B ccmB 358183 - 358830 + | heme exporter protein B RC0357 358905 - 359363 + | hypothetical protein petA 359385 - 359918 + | cytochrome b6-f complex iron-sulfur subunit petB 359925 - 361121 + | cytochrome b TERM 304 361207 - 361244 + F 88 -5.5 -5.5208 | gap 1, opp_overlap 361179 361212, overlap 361208 TTTGTTATTATTTCA TGAGATTGCCGTGCAGCC TAT GGCTGCTCG-CAATGACG TTTTTTGTATTATAC TERM 305 361208 - 361243 + F 71 -6.8 -3.89621 | gap 1, opp_overlap 361179 361212, overlap 361207 TTGTTATTATTTCAT GAGATTGCCGTGCAGCC TAT GGCTGCTCG-CAATGAC GTTTTTTGTATTATA TERM 306 361239 - 361212 - f 78 -10.6 -2.80113 | gap 1, opp_overlap 361208 361207, overlap 361179 TATTATTTCATGAGA TTGCCGTGCAGCC TAT GGCTGCTCG-CAA TGACGTTTTTTGTAT fbcH 361612 - 362367 + | cytochrome c1, heme protein precursor RC0361 362630 - 362857 + | hypothetical protein RC0362 362875 - 363069 + | hypothetical protein hsp22 363130 - 363633 + | heat shock protein RC0364 364074 - 363871 - | hypothetical protein RC0365 364779 - 364570 - | hypothetical protein TERM 307 364737 - 364754 + g 74 -5.5 -4.88407 | GTTTACCGGCATATT CCGGC TTAAACTT GCCGG TTTTTAATTCAATAA RC0366 365137 - 364763 - | hypothetical protein RC0367 365516 - 365037 - | hypothetical protein TERM 308 365202 - 365224 + gr 95 -10.7 -3.89734 | ATGACTCCATGGGAT TTCTCCAAC CGCCT GTTGGAGAA TTTGGTCATTATTAT prfB 366633 - 365526 - | peptide chain release factor 2 TERM 309 368510 - 368520 + G 74 -6.8 -4.19371 | overlap 368516 GTAATATCGAAATTC CGCA ATC TGCG TTTATTGCAGCTTTA lepA 366751 - 368553 + | GTP-binding protein LepA TERM 310 368638 - 368612 - f 70 -8.8 -2.58427 | opp_overlap 368612 368615, overlap 368611 368615 AAGATTTGTTATAAG GAAGTATCTGAA TCT TCCAGATGCTTC TAATGTTCCTCGGTA TERM 311 368612 - 368638 + F 71 -8.8 -2.77999 | opp_overlap 368612 368611 368615, overlap 368615 AAGATTTGTTATAAG GAAGTATCTGAA TCT TCCAGATGCTTC TAATGTTCCTCGGTA RC0370 369716 - 370654 + | putative ATP-dependent protease subunit C (ClpC) RC0371 371062 - 371451 + | hypothetical protein TERM 312 371598 - 371585 - f 85 -2.5 -5.89947 | overlap 371593 GAAAGTTAAAAAAAA TAATA CAGT TATTA AATAAAAAGGTATTA RC0372 372167 - 372715 + | hypothetical protein TERM 313 373470 - 373450 - f 77 -7.7 -4.17523 | overlap 373441 AAATAAGGTTGAAAA CCAGTAATT TTA AATTACTAG ATGTCGGGGCAAATA RC0373 373629 - 374177 + | hypothetical protein RC0374 374372 - 374905 + | putative (p)ppGpp 3-pyrophosphohydrolase RC0375 375517 - 375305 - | hypothetical protein rodA 377067 - 375967 - | rod shape-determining protein rodA ptrB 379412 - 377223 - | protease II TERM 314 378454 - 378472 + g 91 -7.6 -5.18371 | opp_overlap 378456 AAATAATCGCCATTA TATTCTAT TTC ATAGAATA TTTTGTTTTCTGCAG TERM 315 378777 - 378795 + g 74 -7.4 -4.11484 | opp_overlap 378791, overlap 378778 TACAGCTAAATTTCG ATCGCTTG ATA CAAGCGAA TTTTGCGGCATTCGC TERM 316 378778 - 378794 + g 84 -10.9 -3.06569 | opp_overlap 378791, overlap 378777 ACAGCTAAATTTCGA TCGCTTG ATA CAAGCGA ATTTTGCGGCATTCG nuoL3 381108 - 379591 - | putative monovalent cation/H+ antiporter subunit D RC0379 381514 - 381110 - | hypothetical protein RC0380 381804 - 381505 - | hypothetical protein nuoL2 383442 - 381979 - | putative monovalent cation/H+ antiporter subunit D nuoN2 384890 - 383589 - | putative monovalent cation/H+ antiporter subunit D TERM 317 383907 - 383933 + g 80 -9.6 -3.40597 | overlap 383905 TATTATACCGTTTTC GGTTACGTAT AATAAAA ATACGTAACC TATTTGAGTACAACA TERM 318 384218 - 384202 - G 72 -3.7 -5.1287 | TGCATAGGGAAAAAA GCTGTTT TTA AAATAGC ACCTATTAAGAAAAA RC0383 385222 - 384887 - | putative monovalent cation/H+ antiporter subunit C TERM 319 385272 - 385290 + r 93 -11.8 -3.16921 | GTGAATCAGTTTCAT CGTCATTG CCG CAATGACG TTGGTAGACATTAAT trbG 386053 - 385301 - | conjugal transfer protein trbG precursor virB8 386753 - 386055 - | virB8 protein RC0386 387220 - 387399 + | hypothetical protein RC0387 387449 - 388180 + | hypothetical protein virB9 388167 - 388640 + | virB9 protein precursor TERM 320 388669 - 388696 + F 78 -9.2 -3.23869 | gap 1, overlap 388667 TGCGTAGATATGTCA TTGCGA-GCAGCC GTA GGCTGCGTGGCAA TCTTATGAAATAATA virB10 388825 - 390273 + | virB10 protein virB11 390270 - 391274 + | virB11 protein TERM 321 391342 - 391316 - f 82 -11 -2.8007 | overlap 391319 GTAATTGACTAAGCA CAATCTCAGG CCACAAT CCTGAGATTG CCACGCTCCTTTTAG TERM 322 393190 - 393170 - g 70 -8.3 -3.06696 | GGGCTTCGGAAGAGA CCGAAACAA TAA CTGTTCCGG AAAATAATGAGTAAA virD4 391429 - 393204 + | virD4 protein gppA 393197 - 394618 + | guanosine pentaphosphate phosphohydrolase RC0393 395143 - 394832 - | hypothetical protein RC0394 395561 - 395298 - | hypothetical protein TERM 323 395554 - 395572 + g 80 -9 -3.59252 | opp_overlap 395552, overlap 395553 TTTTTTACGAAATCT GTTTTCAA AAT TTGAAAAC TATTATTTAGTGGGA RC0395 396316 - 396020 - | hypothetical protein TERM 324 396371 - 396381 + H 76 -2.6 -5.5074 | CGTCATATTTTTTAG TTTT TAT AAAA TTTTTTATTAGCTTA RC0396 396624 - 396908 + | hypothetical protein RC0397 396853 - 397071 + | hypothetical protein TERM 325 397135 - 397145 + F 70 -4 -4.98616 | opp_overlap 397135, overlap 397128 TTACATATTTAAAAC TTTC TTT GAAA TTTTTAATATTTTCA TERM 326 397510 - 397500 - f 70 -5.4 -4.64591 | opp_overlap 397500 GAATGACATAGAAAA TCAC AGG GTGA TATGCTGCCTTTAAA RC0398 397542 - 398429 + | hypothetical protein RC0399 398392 - 399237 + | hypothetical protein cysQ 399240 - 400016 + | cysQ protein mutS 402828 - 400156 - | DNA mismatch repair protein TERM 327 401733 - 401747 + g 85 -2.9 -5.9663 | TATCACTAGTTTTTT TTAGA AGTTC TCTAA TTTTTTTTACTATTT TERM 328 402108 - 402131 + g 74 -4 -5.1361 | TTCCTTTAATATCTT TCATTTTATA AAAA TCTAAAATGA TTTTTTCGCATTTAT TERM 329 402175 - 402161 - G 100 -7.2 -5.47399 | TTAATCGCAAAAAAA CTATCA ACT TGATAG GTAATACGAAAATTT lacA 403435 - 403001 - | ribose-5-phosphate isomerase B nlpD 403487 - 404161 + | outer membrane antigenic lipoprotein B precursor RC0404 404162 - 404854 + | hypothetical protein TERM 330 404892 - 404855 - f 100 -20.9 -3.30243 | opp_overlap 404850, overlap 404856 AGTTATTTTCCATAA CTTTATGTCATTCCCGC GAAA GCGGGAATGACATAAAA CGAGCCATGCAACAA TERM 331 404891 - 404856 - f 100 -22.2 -2.57931 | opp_overlap 404850, overlap 404855 GTTATTTTCCATAAC TTTATGTCATTCCCGC GAAA GCGGGAATGACATAAA ACGAGCCATGCAACA thyX 404963 - 405847 + | FAD-dependent thymidylate synthase TERM 332 405894 - 405837 - f 91 -11.5 -3.18434 | overlap 405850 405852 AAGAACTGATGAAGA TTTTTGGGTAATATATGTCATTCCTGC GAAA GCAGGAATGACATACAACAACCATAAC GGAATTTGATAAAAA TERM 333 405881 - 405850 - f 100 -19 -3.01924 | overlap 405837 405852 GATTTTTGGGTAATA TATGTCATTCCTGC GAAA GCAGGAATGACATA CAACAACCATAACGG TERM 334 405879 - 405852 - f 100 -17.2 -3.06696 | overlap 405850 405837 TTTTTGGGTAATATA TGTCATTCCTGC GAAA GCAGGAATGACA TACAACAACCATAAC TERM 335 406403 - 406385 - g 77 -4.5 -5.19261 | opp_overlap 406385 406388, overlap 406388 AAATTTATGAAAAAA TTACCGG TGATG CCGGTTA TTTTGATACTAAAAT TERM 336 406388 - 406400 + G 74 -6.9 -4.27443 | opp_overlap 406385 406388, overlap 406385 TTTATGAAAAAATTA CCGGT GAT GCCGG TTATTTTGATACTAA TERM 337 407170 - 407160 - g 70 -4 -5.00884 | AGCTCCGGGAAAAAA CAAA ATT TTTG CAATTGATCTAACAG tolB 405922 - 407256 + | translocation protein TolB rpoH 408276 - 407395 - | RNA polymerase factor sigma-32 TERM 338 407989 - 408000 + g 77 -3 -5.53991 | opp_overlap 407989 TAGGCGAAAACCAAG TTCA GGAT TGAA TTTTTTTACTGCCTG cox11 408365 - 408931 + | cytochrome C oxidase assembly protein RC0409 410009 - 409029 - | hypothetical protein TERM 339 410156 - 410129 - H 74 -9.2 -2.80113 | gap 1, overlap 410096 TATTATTTCATGAGA TTGCCATGCAGCC TAG GGCTGC-TTGCAA TGACGAAATCGATAA trmU 410256 - 411368 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 340 412580 - 412590 + G 74 -5.4 -4.77165 | CTTCTTTAGCCGCTA TCCT TGG AGGA TTTTGTTCTACGGAA atrC1 411499 - 412896 + | cationic amino acid transporter-1 TERM 341 412976 - 412936 - f 76 -9.9 -2.71322 | overlap 412933 CGAACGTAGAGAGCA TGGCAATCTCATGAAGT AGTACAA AATTCCTGAGATTGCCA AGTCAAGGCTTTGCC hisS 412971 - 414290 + | histidyl-tRNA synthetase TERM 342 414493 - 414507 + F 89 -4.3 -5.97979 | opp_overlap 414493 GCAATCCAGTAAAAA TTCTG ATTTA CAGAA TTTTTTTATTATTGT RC0413 414723 - 414920 + | putative ABC transporter ATP-binding protein RC0414 414992 - 415201 + | putative ABC transporter ATP-binding protein TERM 343 415244 - 415208 - T 100 -12.7 -4.72272 | opp_overlap 415208 TTCCCGTAGGAAAAA GATTGTTGATTTTAA AGGTAAA TTAAAATCAACAATC TTTATGATGATTATA TERM 344 415208 - 415244 + T 100 -12.7 -4.03093 | opp_overlap 415208 TTCCCGTAGGAAAAA GATTGTTGATTTTAA AGGTAAA TTAAAATCAACAATC TTTATGATGATTATA TERM 345 415384 - 415411 + T 74 -9.2 -2.80443 | gap 1, opp_overlap 415376, overlap 415404 415408 GATACCATCACGTCA TTGCGA-GCAGCC ATA GGCTGCGTAGCAA TCTCGTCAAATATCC RC0415 415857 - 415639 - | hypothetical protein TERM 346 415791 - 415748 - GT 75 -4.8 -5.06089 | gap 1, opp_overlap 415750 415759 415760 415762 415765, overlap 415750 415755 415765 415767 AAAGCAGAAACAAAA GAGGTAACTTTACTTAACACC TTT GATAA-AAGTAAAGTTACCTT TATCAAAGGTGTTAT TERM 347 415789 - 415750 - GT 75 -7.4 -4.12652 | gap 1, opp_overlap 415750 415759 415760 415762 415765, overlap 415748 415755 415765 415767 AGCAGAAACAAAAGA GGTAACTTTACTTAACACC TTT GATAA-AAGTAAAGTTACC TTTATCAAAGGTGTT TERM 348 415759 - 415809 + gT 100 -12.3 -5.43866 | gap 1, opp_overlap 415750 415748 415755 415765 415767, overlap 415750 415760 415762 415765 AAAAGAGGTAACTTT ACT-TAACACCTTTGATAAAAGTA AAGT TACCTTTATCAAAGGTGTTATAGA TTTTTTTAGACATTG TERM 349 415760 - 415808 + gT 100 -15.8 -3.85235 | gap 1, opp_overlap 415750 415748 415755 415765 415767, overlap 415750 415759 415762 415765 AAAGAGGTAACTTTA CT-TAACACCTTTGATAAAAGTA AAGT TACCTTTATCAAAGGTGTTATAG ATTTTTTTAGACATT TERM 350 415762 - 415805 + gT 100 -18.6 -2.99257 | opp_overlap 415750 415748 415755 415765 415767, overlap 415750 415760 415759 415765 AGAGGTAACTTTACT TAACACCTTTGATAAAAGTA AAGT TACCTTTATCAAAGGTGTTA TAGATTTTTTTAGAC TERM 351 415765 - 415802 + gT 100 -15.9 -3.6185 | opp_overlap 415750 415748 415755 415765 415767, overlap 415750 415762 415760 415759 GGTAACTTTACTTAA CACCTTTGATAAAAGTA AAGT TACCTTTATCAAAGGTG TTATAGATTTTTTTA TERM 352 415802 - 415765 - GT 100 -18.1 -3.07994 | opp_overlap 415750 415765 415762 415760 415759, overlap 415750 415748 415755 415767 GGTAACTTTACTTAA CACCTTTGATAAAAGTA AAGT TACCTTTATCAAAGGTG TTATAGATTTTTTTA TERM 353 415800 - 415767 - GT 100 -14.9 -3.09803 | opp_overlap 415750 415765 415762 415760 415759, overlap 415750 415748 415765 415755 TAACTTTACTTAACA CCTTTGATAAAAGTA AAGT TACCTTTATCAAAGG TGTTATAGATTTTTT RC0416 416110 - 415757 - | hypothetical protein RC0417 416399 - 416061 - | hypothetical protein TERM 354 416168 - 416154 - GR 70 -7.1 -3.69395 | opp_overlap 416153 GTTATTATTTAATAA GGCGT TAACT ACGCC AATTTCTAAAGTGTT RC0418 417367 - 416627 - | hypothetical protein RC0419 417550 - 417386 - | hypothetical protein TERM 355 417577 - 417587 + r 76 -2.6 -5.50925 | CAAGACCGGAAAAGT TTTT TCT AAAA TTTTTTATGTTACTT RC0420 418154 - 417870 - | hypothetical protein RC0421 418569 - 418141 - | hypothetical protein TERM 356 418813 - 418800 - H 72 -5.3 -4.80882 | ATTTTATATGAAAAA TTGAC ATGG GTCAA GAGATATTAAATTAA TERM 357 418872 - 418908 + H 100 -12.7 -4.44245 | opp_overlap 418882, overlap 418882 TTTATTCACAGAATC CAGTTAAAAATACTAAT AAT ATTAGTATTTTTAGTTG TTTTCTGGATACTGT TERM 358 418898 - 418882 - H 78 -6.7 -4.68424 | opp_overlap 418882 418872 GAATCCAGTTAAAAA TACTAAT AAT ATTAGTA TTTTTAGTTGTTTTC TERM 359 418882 - 418898 + H 83 -6.7 -5.07971 | opp_overlap 418882, overlap 418872 GAATCCAGTTAAAAA TACTAAT AAT ATTAGTA TTTTTAGTTGTTTTC tolQ 419065 - 419790 + | tolQ protein tolR 419790 - 420221 + | tolR protein RC0424 421307 - 420855 - | hypothetical protein RC0425 422037 - 421663 - | hypothetical protein TERM 360 422078 - 422051 - H 70 -4.4 -5.00027 | ATTAAAAATAGAAAA TTTATTAAATAT AGAG ATTTTTAATAAA TAATAATTGGATTTT TERM 361 422166 - 422140 - H 78 -6.9 -4.59946 | opp_overlap 422140 422146 422148, overlap 422142 AAAACAATAAAATAA TATATATATAT ATATA ATATATATATA TGGGACGATTGTATG TERM 362 422166 - 422142 - H 80 -8.9 -3.85416 | opp_overlap 422140 422146 422148, overlap 422140 AACAATAAAATAATA TATATATATAT ATA ATATATATATA TGGGACGATTGTATG RC0426 422179 - 422886 + | putative (p)ppGpp 3-pyrophosphohydrolase proP2 424153 - 422837 - | proline/betaine transporter aprE 425827 - 424292 - | alkaline protease secretion protein AprE aprD 427764 - 426010 - | alkaline protease secretion ATP-binding protein AprD asd 428791 - 427775 - | aspartate-semialdehyde dehydrogenase TERM 363 428136 - 428152 + g 78 -9.5 -3.26449 | opp_overlap 428139, overlap 428131 428139 ATTTTGTTTAGTTCA GAAGCAA TTT TTGCTTC TTCACTTGTATAGCC pkcI 429146 - 428784 - | protein kinase C inhibitor 1 TERM 364 429230 - 429260 + r 85 -3.5 -5.66684 | gap 1, opp_overlap 429234 429238, overlap 429234 429238 TGACGAAGCAATCCA GTAA-GAAATGCTA ATTT TAGCATTTCTTTAA TTTTTTTCTGGATTG TERM 365 429234 - 429255 + r 100 -10.3 -4.55485 | opp_overlap 429234 429238, overlap 429230 429238 GAAGCAATCCAGTAA GAAATGCTA ATTT TAGCATTTC TTTAATTTTTTTCTG TERM 366 429255 - 429234 - R 83 -10.3 -3.23598 | opp_overlap 429234 429230 429238, overlap 429238 GAAGCAATCCAGTAA GAAATGCTA ATTT TAGCATTTC TTTAATTTTTTTCTG TERM 367 429238 - 429251 + r 72 -5.3 -4.73341 | opp_overlap 429234 429238, overlap 429234 429230 CAATCCAGTAAGAAA TGCTA ATTT TAGCA TTTCTTTAATTTTTT RC0432 429687 - 429334 - | hypothetical protein hslV 429961 - 430509 + | ATP-dependent protease peptidase subunit TERM 368 430548 - 430536 - g 79 -4.7 -5.28778 | opp_overlap 430544 ACTACTTATAAAAAA GACCC TAT GGGGC TTACCCCTTCTCAAA hslU 430506 - 431858 + | ATP-dependent protease ATP-binding subunit RC0435 432102 - 432590 + | hypothetical protein RC0436 432655 - 432858 + | hypothetical protein RC0437 433031 - 433537 + | hypothetical protein TERM 369 433795 - 433776 - f 70 -3.5 -5.07652 | GCTGTTAAAATAAAA GCCCCTT ACTAGA AAGTGGC AGTAATAAAGAAAAT RC0438 433844 - 434029 + | hypothetical protein RC0439 434005 - 434583 + | hypothetical protein TERM 370 435487 - 435510 + G 81 -4 -5.55769 | ACTCCTATGATTGTG GCTTATAA AGTTAATC TTATAAGC TTTTTTATTATCAGG lpxB 434593 - 435933 + | lipid-A-disaccharide synthase RC0441 436202 - 435930 - | hypothetical protein RC0442 436550 - 437569 + | hypothetical protein cyaY 437709 - 438020 + | frataxin-like protein RC0444 438377 - 438727 + | hypothetical protein RC0445 439793 - 440308 + | hypothetical protein RC0446 440343 - 440633 + | hypothetical protein RC0447 440931 - 441125 + | hypothetical protein TERM 371 441173 - 441196 + T 85 -8.4 -4.65263 | opp_overlap 441173, overlap 441195 AGGAGTCTAGTAAAA CATATAAAAA CTTG TTTTTATATG TTTATTTTACCAAAT TERM 372 441196 - 441173 - T 81 -8.4 -4.2717 | opp_overlap 441173 441195 AGGAGTCTAGTAAAA CATATAAAAA CTTG TTTTTATATG TTTATTTTACCAAAT gltX 442622 - 441279 - | glutamyl-tRNA synthetase TERM 373 442646 - 442670 + r 81 -10 -3.48593 | overlap 442648 AATTTTATTAATTGT CATCCCGTGG CTTGA CCACGGGATC TTGTATCACAGCCTG TERM 374 442648 - 442668 + r 100 -12.6 -3.31726 | overlap 442646 TTTTATTAATTGTCA TCCCGTGG CTTGA CCACGGGA TCTTGTATCACAGCC topA 445061 - 442731 - | DNA topoisomerase I TERM 375 444003 - 444024 + g 71 -2.3 -5.38497 | gap 1, overlap 444004 444013 ATTTGTGGGTCTTAT TGCTTCATGA GCT TCTTGA-GCA TTTTTTACTTTGGAT RC0450 445528 - 445193 - | putative DNA processing protein Smf TERM 376 445450 - 445439 - G 74 -7.2 -4.08485 | opp_overlap 445447 445448 TGGATCTAAAGGAAA GCCG GGAA CGGC AAATATTGCCCTATT TERM 377 446288 - 446313 + r 85 -7.1 -4.88795 | opp_overlap 446287 446290 GGGAATCCAGTCAAG CATATAAAAAT TTGT GTTTTTATATG TTTATTTTGTTAAAT tdpX1 447072 - 446464 - | thioredoxin peroxidase 1 TERM 378 446959 - 446947 - G 79 -3.5 -5.626 | overlap 446934 TAGGGGATAAAAAAA TAATA CTA TATTA TCCCCTGCAGCATAA RC0452 448086 - 447148 - | hypothetical protein RC0453 448391 - 448164 - | hypothetical protein RC0454 450026 - 448458 - | hypothetical protein RC0455 450062 - 450526 + | Holliday junction resolvase-like protein TERM 379 450602 - 450575 - f 78 -9.8 -3.14261 | overlap 450591 GAAAAACCTACTCAA TGTCATCCCCGC GAAA GCGGGGATCCCA GCAAAATAACTTCAA TERM 380 450653 - 450676 + F 83 -9.8 -3.66999 | opp_overlap 450653 ATTTGACAAAATAAA CCTATAAAAA CTTG TTTTTATAGG TTTGACTGGATGCCT TERM 381 450676 - 450653 - f 100 -9.8 -4.77775 | opp_overlap 450653 ATTTGACAAAATAAA CCTATAAAAA CTTG TTTTTATAGG TTTGACTGGATGCCT RC0456 451127 - 451981 + | putative dTDP-4-dehydrorhamnose reductase. capD 452164 - 453189 + | capD protein rffE 453182 - 454315 + | putative UDP-N-acetylglucosamine 2-epimerase TERM 382 454373 - 454389 + GF 81 -3.7 -5.55664 | opp_overlap 454373 ATTAATAAAACTTAA CACTTTA TTT TTAAGTG TTTTTTTACTAATAA TERM 383 455055 - 455019 - gf 100 -8.7 -5.37171 | opp_overlap 455018 455032 455044, overlap 455024 AATATTAAAGAAAAA CCAAACTCGGAAACCAT TTT ATGGCTTCCTAGATGGG AATTATCATTTAAAA TERM 384 455050 - 455024 - gf 100 -10.2 -4.46652 | opp_overlap 455018 455032 455044, overlap 455019 TAAAGAAAAACCAAA CTCGGAAACCAT TTT ATGGCTTCCTAG ATGGGAATTATCATT RC0459 454275 - 455621 + | hypothetical protein TERM 385 455801 - 455791 - g 72 -2.6 -5.37593 | TGCTAAATCAAAAAA TAAA AAT TTTA GATATAGGTTGTGGA RC0460 455637 - 455933 + | hypothetical protein RC0461 456307 - 458121 + | glycosyltransferase RC0462 459124 - 458126 - | hypothetical protein TERM 386 459031 - 459042 + g 77 -3 -5.66229 | GTACTTTAGTTGCTT TTAC TGCT GTAA TTTTTTCTTCTTCCT RC0463 460010 - 459216 - | hypothetical protein RC0464 460787 - 460020 - | putative hydrolase capM1 460820 - 461992 + | capM protein RC0466 462681 - 462478 - | hypothetical protein RC0467 463103 - 462930 - | hypothetical protein TERM 387 464331 - 464301 - R 76 -6.4 -4.53475 | opp_overlap 464311 464312, overlap 464309 464311 ACTCCATAAAAATAA TAAAAAAATACTAA AAA TTAGCATTTTTATA CTTCCTTGCTTCGTC TERM 388 464323 - 464309 - R 89 -3.6 -6.04419 | opp_overlap 464311 464312, overlap 464301 464311 AAAATAATAAAAAAA TACTAA AAA TTAGCA TTTTTATACTTCCTT TERM 389 464506 - 464472 - R 74 -6.6 -4.20516 | opp_overlap 464473 464479, overlap 464473 464479 GGTGTAGGGAAGAAA GTAAAAAGGCAGAT AAATAAA ACCTGCCTTTTTAT AATTATTAACGAGAA TERM 390 464505 - 464473 - R 78 -10.1 -3.11988 | opp_overlap 464473 464479, overlap 464472 464479 GTGTAGGGAAGAAAG TAAAAAGGCAGAT AAATAAA ACCTGCCTTTTTA TAATTATTAACGAGA TERM 391 464499 - 464479 - R 75 -4.7 -5.09521 | opp_overlap 464479 464473, overlap 464473 464472 GGAAGAAAGTAAAAA GGCAGAT AAATAAA ACCTGCC TTTTTATAATTATTA rpsD 465129 - 464512 - | 30S ribosomal protein S4 ctaB 465254 - 466171 + | protoheme IX farnesyltransferase TERM 392 466159 - 466183 + T 74 -8.7 -3.29386 | AACTAACACTATATC CACTATTAGCT GAG AGATAATAGTG TTGGATTACTTTTAT RC0470 467016 - 466453 - | putative spore photoproduct lyase TERM 393 467859 - 467849 - g 81 -4 -5.67283 | AATCCAAATAAAAAA TCAT TAT ATGA AGACCTTATTATTTT RC0471 467681 - 467929 + | hypothetical protein asmA 470700 - 468181 - | outer membrane assembly protein rimM 471483 - 470986 - | 16S rRNA-processing protein RC0474 471501 - 474176 + | hypothetical protein xseB 474190 - 474432 + | exodeoxyribonuclease VII small subunit RC0476 474470 - 474772 + | hypothetical protein RC0477 474762 - 475046 + | hypothetical protein TERM 394 475104 - 475132 + F 71 -4.7 -4.83615 | overlap 475105 CCTAATATTGTTTTA TTCATCATAATAA ATA TTGTTTTGATGAG TTTTTGTGCGGGATA RC0478 475125 - 475535 + | hypothetical protein RC0479 475539 - 475853 + | hypothetical protein mpg 476370 - 475819 - | 3-methyladenine DNA glycosylase nuoE 477387 - 476884 - | NADH dehydrogenase subunit E TERM 395 477707 - 477736 + r 73 -3.8 -5.19275 | CATAATATATATACC CAATACATTT TTTGTTTTTT AAATGTATTG TTTTATTTTATGGAT nuoD 478987 - 477812 - | NADH dehydrogenase subunit D nuoC 479814 - 479086 - | NADH dehydrogenase subunit C nuoB 480316 - 479792 - | NADH dehydrogenase subunit B nuoA 480719 - 480321 - | NADH dehydrogenase subunit A TERM 396 480802 - 480775 - R 74 -9.2 -2.80443 | gap 1, opp_overlap 480770, overlap 480751 GGATATTTGATGAGA TTGCCACGCAGCC TAT GGCTGC-TTGCAA TGACGTAGATTTAAT RC0486 482085 - 480850 - | hypothetical protein RC0487 482559 - 482086 - | hypothetical protein TERM 397 482664 - 482692 + H 100 -14.7 -3.15579 | opp_overlap 482659, overlap 482668 ATTTCAAGGAGCGTG GCAATCTCAGGAA TCT TGCCTGAGATTGC TTAGTCAAAACTTAC TERM 398 482668 - 482688 + H 73 -8.3 -3.39895 | opp_overlap 482659, overlap 482664 CAAGGAGCGTGGCAA TCTCAGGAA TCT TGCCTGAGA TTGCTTAGTCAAAAC RC0488 482741 - 483292 + | hypothetical protein RC0489 483225 - 483530 + | hypothetical protein RC0490 483530 - 484084 + | hypothetical protein xerD 484377 - 485297 + | site-specific tyrosine recombinase XerD RC0492 485381 - 486415 + | hypothetical protein RC0493 486509 - 487690 + | hypothetical protein TERM 399 487725 - 487749 + T 70 -8.6 -2.54193 | GAAAAATACAGTTGT CATCCCGTGA TTTAT TCACGGGATC TAGCTTAAAATACTA TERM 400 487754 - 487783 + T 78 -6.7 -4.52873 | opp_overlap 487760, overlap 487760 TTCACGGGATCTAGC TTAAAATACTAAT ATTA ATTAGTATTTTTA TTGTTTTTATGGACC TERM 401 487760 - 487777 + T 88 -5.7 -5.51353 | opp_overlap 487760, overlap 487754 GGATCTAGCTTAAAA TACTAAT ATTA ATTAGTA TTTTTATTGTTTTTA fabI 488670 - 487888 - | enoyl-(acyl carrier protein) reductase TERM 402 488511 - 488526 + g 72 -4.7 -4.93296 | AACCTATTTCCTTAG CGAGT GGTTTA ACTCG TTTTTCTAGTACTCC lnt 488746 - 490245 + | apolipoprotein N-acyltransferase TERM 403 490657 - 490642 - g 72 -4.8 -4.89477 | overlap 490649 CTCCTAATAATAAAA TTGAAT ATCT ATTCAA AGAAATAGAAAGTGA RC0496 490365 - 490850 + | hypothetical protein RC0497 490954 - 491757 + | hypothetical protein TERM 404 491903 - 491934 + F 74 -7.6 -3.76186 | opp_overlap 491904 491911, overlap 491904 491911 TGATCGCGGGATACA ATTTAAAATACTAA AAAT TTAGTATTTTAAAG TTACTTTTATGGATG TERM 405 491933 - 491904 - f 87 -11.1 -3.48593 | opp_overlap 491903 491904 491911, overlap 491911 GATCGCGGGATACAA TTTAAAATACTAA AAAT TTAGTATTTTAAA GTTACTTTTATGGAT TERM 406 491904 - 491933 + F 82 -11.1 -2.84989 | opp_overlap 491904 491911, overlap 491903 491911 GATCGCGGGATACAA TTTAAAATACTAA AAAT TTAGTATTTTAAA GTTACTTTTATGGAT TERM 407 492321 - 492305 - f 70 -5.3 -4.67552 | overlap 492302 TGCAGTAAAAAATAA TTTAATT ACC AATTAAA ACTTATTTACAGATA TERM 408 492579 - 492589 + GF 88 -2.6 -6.17669 | opp_overlap 492579 TGTTTATCTCTAATA TTTT TCA AAAA TTTTTTTCTTTTCTT RC0498 492563 - 493480 + | hypothetical protein RC0499 493407 - 494324 + | ABC transporter permease protein TERM 409 494948 - 494932 - g 85 -10.9 -3.29558 | overlap 494930 GCATAATTTAGAAGA TGCCGTA AAT TACGGCA AAAGGCTTATAGTCT RC0500 494321 - 495043 + | putative ABC transporter ATP-binding protein RC0501 495539 - 495123 - | hypothetical protein RC0502 495983 - 495771 - | hypothetical protein TERM 410 495851 - 495841 - G 75 -2.4 -5.5762 | AGCAAATAGAAAAAA GGTG TGC CGCC ATAATTGTCTACTGT RC0503 496503 - 496351 - | hypothetical protein TERM 411 496839 - 496856 + r 70 -5.7 -4.32607 | opp_overlap 496839 ATTTCTGCAATCCAA TAGTTAA TTTT TTAACTA TTTATTAGATTTTGG RC0504 497447 - 496854 - | hypothetical protein TERM 412 497413 - 497448 + g 71 -9.1 -2.55544 | opp_overlap 497412, overlap 497410 AGCGACTGCAAGGAG CGTGGCAATCTCG GGAAGTTTGA TGGGATTGCCACG TCGCTTCGCTCCTCG TERM 413 498148 - 498134 - g 74 -8.6 -3.28785 | TCCGAAAACAGGTAA GGTACT GCA AGTACC TATAGAGAAATGGGA lysK 497535 - 499118 + | lysyl-tRNA synthetase RC0506 499252 - 500184 + | hypothetical protein TERM 414 500256 - 500215 - f 74 -9.5 -2.79878 | gap 1, opp_overlap 500222 500226, overlap 500214 500217 GCGAGCGACTGAAAG GAGCGTGGCAATCTCAGGAA TGT TGCCTGAGATTGCTTCG-TC GATGCCTTTGCGTCT TERM 415 500255 - 500217 - f 72 -8.8 -2.9462 | opp_overlap 500222 500226, overlap 500215 500214 GAGCGACTGAAAGGA GCGTGGCAATCTCAGGAA TGT TGCCTGAGATTGCTTCGT CGATGCCTTTGCGTC TERM 416 500222 - 500250 + F 100 -14.7 -3.19656 | opp_overlap 500217 500215 500214, overlap 500226 ACTGAAAGGAGCGTG GCAATCTCAGGAA TGT TGCCTGAGATTGC TTCGTCGATGCCTTT TERM 417 500226 - 500246 + F 73 -8.3 -3.40867 | opp_overlap 500217 500215 500214, overlap 500222 AAAGGAGCGTGGCAA TCTCAGGAA TGT TGCCTGAGA TTGCTTCGTCGATGC TERM 418 500791 - 500779 - g 72 -3.5 -5.25699 | ATTATAGAAGAAAAA TTAAA ATC TTTAA TGGATATACCGGTCT tme 500323 - 502626 + | malic enzyme RC0508 502655 - 503200 + | hypothetical protein sec7 503290 - 503520 + | protein transport protein sec7 RC0510 504149 - 503736 - | hypothetical protein RC0511 504363 - 504115 - | hypothetical protein proP3 504561 - 505817 + | proline/betaine transporter RC0513 506186 - 506001 - | hypothetical protein RC0514 506669 - 506322 - | hypothetical protein RC0515 506909 - 506694 - | hypothetical protein RC0516 507584 - 507066 - | hypothetical protein TERM 419 507316 - 507304 - GR 71 -7.7 -3.53444 | opp_overlap 507295 507304 TCATCCTGCTCTAAA GCGAT ATT ATCGC TTCTACGCTCCTCAC RC0517 507714 - 507526 - | hypothetical protein RC0518 507977 - 507762 - | hypothetical protein RC0519 508933 - 508013 - | hypothetical protein TERM 420 508065 - 508076 + g 74 -3 -5.34309 | CTTGAATTATTAGTA TTAC GGAA GTAA TTTTTATTTACTGAT mdh 510276 - 509332 - | malate dehydrogenase TERM 421 510618 - 510654 + Gr 74 -5.4 -4.87665 | CTTGATCACGGGATC CAGTTAAAAATACTAG AATTA TTAGTATTTTTTATTG TTTTTATGGATCCCA tlc2 512358 - 510835 - | ADP,ATP carrier protein RC0521 510570 - 510908 + | hypothetical protein TERM 422 512433 - 512476 + Tr 100 -11 -4.59109 | overlap 512434 GCAAGGCTTAGAGCT TCTTTATAGGTCATTCCCGC ATAT GCGGGAATGACCTCAAACGC TTTTTAGAAACTGTC TERM 423 512434 - 512475 + Tr 100 -14.5 -3.34984 | overlap 512433 CAAGGCTTAGAGCTT CTTTATAGGTCATTCCCGC ATAT GCGGGAATGACCTCAAACG CTTTTTAGAAACTGT pyrG 514183 - 512570 - | CTP synthetase TERM 424 512755 - 512773 + g 71 -7.6 -3.56576 | overlap 512751 512751 ATACTATTCCATGTT TTTCAAAA ATA TTTTGAAA TTCATTATTAAATTT TERM 425 513352 - 513386 + g 85 -11 -3.36452 | opp_overlap 513352 513349 TTAGCCTATTAATTA TATCATGCCATTTA TCTAATT TAGATGGCATGATA TTAATATTAAAAAAT TERM 426 513802 - 513783 - G 73 -4.4 -5.05116 | gap 1 TCACAAATAATAAAA TCAAA-ACC CTT GGTGTTTGA AAGTATAAAATCTTT kdsB 514926 - 514186 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 427 515158 - 515142 - R 70 -8.7 -2.62396 | overlap 515144 CAGCTGGTTAGAGCA CACGCCT GAT AAGCGTG AGGTCGGAAGTTCAA mutT 515972 - 515682 - | mutator protein MutT TERM 428 515726 - 515744 + g 71 -7.5 -3.53811 | opp_overlap 515725 GATTCTGTAATTCAT GCTCATT TAAAC AATGAGC TTTAAGGCAAATCAA RC0526 516133 - 517656 + | hypothetical protein folE 517649 - 518218 + | GTP cyclohydrolase I TERM 429 518344 - 518312 - f 93 -5.7 -6.11019 | gap 2, overlap 518313 AAAAATTAAAAAAAA CTGG--ATCCCGTGG TCAAG CCACGGGATAACCAA ATAAATGATTATAAA TERM 430 518343 - 518313 - f 74 -7 -4.21121 | gap 2, overlap 518312 AAAATTAAAAAAAAC TGG--ATCCCGTGG TCAAG CCACGGGATAACCA AATAAATGATTATAA TERM 431 519074 - 519061 - g 72 -2.5 -5.32882 | TATTACGATAAAAAA TTTAA GACA TTAAA AGATAATCCTGATAT proS 518383 - 519663 + | prolyl-tRNA synthetase TERM 432 519999 - 519989 - g 72 -2.6 -5.35222 | AAAACTTAGAAAAAA TAAT CAA ATTA AAACCATCCATTCTT RC0529 519864 - 520832 + | putative cell filamentation proteins (fic) TERM 433 520809 - 520827 + F 73 -9 -3.2082 | opp_overlap 520808 520809 520813, overlap 520813 AAAGGGGATAAGAAT CAAACTTA TTA TAAGTTTG TGTAGTTTTTAATGT TERM 434 520827 - 520809 - f 72 -9 -2.89234 | opp_overlap 520809 520813, overlap 520808 520813 AAAGGGGATAAGAAT CAAACTTA TTA TAAGTTTG TGTAGTTTTTAATGT RC0530 520894 - 521229 + | hypothetical protein TERM 435 521716 - 521740 + G 77 -8.7 -3.57144 | opp_overlap 521716 521715 521725 TGAAGTAATAAAAGC TCTAGTAAATC TAG GATTTTCTAGA TTTGAAGCTCAAAAC ruvA 521234 - 521845 + | Holliday junction DNA helicase motor protein RC0532 522472 - 522759 + | hypothetical protein TERM 436 522807 - 522844 + G 74 -8.8 -3.23393 | overlap 522800 522804 CTATTTTTTGGCTAT TATTAGTCATTATATT CGATTT AAAATAATGACTAATA TATTATCACCTGAAA ruvB 522799 - 523863 + | Holliday junction DNA helicase B TERM 437 524612 - 524598 - g 100 -7.2 -5.61596 | AGTTCTACAAAAAAA CATCTA AGC TAGATG CGATGGTTTCACCGA msbA1 523856 - 525619 + | multidrug resistance protein TERM 438 526125 - 526141 + G 71 -5.2 -4.64992 | AGCAAGGAAAATCCT GAAGTT TCTTT AACTTC TTTCTATTTTTTGAC TERM 439 526472 - 526483 + G 73 -4.4 -5.00616 | opp_overlap 526472 TTCTACAGTCATTAA TCCT TTCA AGGA TTTTTTCAAAAGAGA ampG4 525813 - 527057 + | ampG protein dacF 527234 - 528154 + | penicillin-binding protein dacF precursor rlpA 529286 - 528324 - | rare lipoprotein A precursor RC0538 529881 - 529264 - | hypothetical protein TERM 440 529871 - 529851 - G 74 -5.5 -4.76191 | ATAGACTAAAAGAAA GAGTTATAA AAA TTAGAACTC GTAATATCATAACAA TERM 441 530000 - 529984 - R 72 -6.7 -4.14739 | opp_overlap 529984 GGATCCAGCTTAAAA TACTAAT ATT ATTAGTA TTTTAAGCTGGATCC TERM 442 529984 - 530000 + r 72 -6.7 -4.14739 | opp_overlap 529984 GGATCCAGCTTAAAA TACTAAT ATT ATTAGTA TTTTAAGCTGGATCC TERM 443 530126 - 530097 - R 70 -3.7 -5.07011 | GACATAAAGTAAAAA TAGTAAGGTATTA TATA TCATATCTTACTA TCCGGTAATTTATTC RC0539 530656 - 530114 - | intracellular septation protein A TERM 444 530194 - 530181 - G 70 -3.9 -4.95487 | overlap 530187 AAAATAAATATAAAA GTAAT AGGT ATTAC ACCGAATACTTTGAA RC0540 531534 - 530686 - | hypothetical protein RC0541 531924 - 531544 - | hypothetical protein RC0542 533106 - 532111 - | hypothetical protein RC0543 533248 - 533874 + | putative protocatechuate-3,4-dioxygenase, beta subunit TERM 445 533938 - 533975 + F 72 -6.3 -4.33907 | gap 1, opp_overlap 533919 533943 TCTCAGGATATTTGA CGAGATTGCCACGCAGTC TAC GACTGC-TCGCAATGACG TTTTGCCTCTTTCTG TERM 446 534130 - 534145 + G 72 -3.4 -5.1356 | TGTATTATAGTATTT TTATTA TCTA TAATAA TTTTTATTCCTAAAA tlpA 534082 - 534726 + | thiol:disulfide interchange protein tlpA sohB 534892 - 535806 + | protease sohB TERM 447 535870 - 535846 - g 86 -7.1 -4.76171 | opp_overlap 535849 535859, overlap 535841 535847 TAAAAAACTAGAAAA TTTTTCCGGCA GTT TGCCGGAATAT GCTACAGAGCATAGT TERM 448 535869 - 535847 - g 85 -10.6 -3.43262 | opp_overlap 535849 535859, overlap 535841 535846 AAAAAACTAGAAAAT TTTTCCGGCA GTT TGCCGGAATA TGCTACAGAGCATAG TERM 449 535849 - 535867 + G 100 -13.2 -2.78463 | opp_overlap 535841 535847 535846, overlap 535859 AAAACTAGAAAATTT TTCCGGCA GTT TGCCGGAA TATGCTACAGAGCAT TERM 450 536018 - 536004 - g 74 -7.1 -3.96618 | TTGAAGCCCAAATAA GACCC CGTTC GGGTC TTGCCGTTAAACACG dut 535808 - 536254 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 451 536362 - 536337 - f 100 -10.7 -4.12475 | opp_overlap 536337 TACATATTAGATAAA CCTATAAAAAA TAAG TTTTTTATAGG TTTTACTGGATTCCT TERM 452 536337 - 536362 + F 100 -10.7 -4.31379 | opp_overlap 536337 TACATATTAGATAAA CCTATAAAAAA TAAG TTTTTTATAGG TTTTACTGGATTCCT TERM 453 536474 - 536460 - f 70 -5.8 -4.2123 | overlap 536469 TATCCACGCAACAAA TCATAA AAC TTATGA AAATCACAATAAAAT slt 536471 - 538432 + | putative soluble lytic murein transglycosylase precursor RC0548 538519 - 539478 + | hypothetical protein TERM 454 539697 - 539707 + G 72 -2.6 -5.50499 | AAAATATATCTTTAC TAAT AAT ATTA TTTTTTTCAATATCA TERM 455 540047 - 540065 + G 73 -4.6 -4.96848 | TTTATAGGATATAGC GATATAAC AGC GTTACATC TTTTTCTATCACAAG mccF 539564 - 540619 + | microcin C7 self-immunity protein RC0550 543314 - 540798 - | hypothetical protein TERM 456 541352 - 541339 - G 84 -5.3 -5.34857 | TCAAATAAAATAAAA GCTTT GCTG AAAGC CGTGAGTTTTATTTG TERM 457 542103 - 542093 - G 82 -2.6 -6.04324 | opp_overlap 542093 GTAAAAAAGAAAAAA TTTT AGG AAAA TCCTTTTTATCCGTT RC0551 543464 - 543862 + | hypothetical protein RC0552 544594 - 543866 - | hypothetical protein TERM 458 544691 - 544744 + r 73 -9 -3.14344 | AGCCAGCATTTATGC TGACGTGGCAATCTCAGGAGTT TTTTTATATT ATCTTATGAGATTGCCGCGTCG TTGCTAACGCAACTC coxA 546401 - 544803 - | cytochrome c oxidase polypeptide I RC0554 546790 - 546407 - | putative acetyltransferase coxB 547930 - 546983 - | cytochrome c oxidase polypeptide II RC0556 548403 - 548101 - | putative glycerol-3-phosphate cytidyltransferase (tagD) TERM 459 548627 - 548617 - H 72 -2.6 -5.38951 | overlap 548574 AACTTATATAAAAAA TTAA ATT TTAA TCAAAAAAAAACTAA TERM 460 549520 - 549506 - g 70 -7.2 -3.73402 | opp_overlap 549505 ATATGTTTCATTAAA TCTTTC AGG GAAAGA ATATAATATATATCG TERM 461 549818 - 549806 - g 73 -7.7 -3.6993 | opp_overlap 549806 549808, overlap 549804 TATTCAGGTAAAACA TAGCG GTA CGCTA TCTACTGCTTATGCG RC0557 548691 - 550121 + | hypothetical protein TERM 462 550175 - 550192 + F 85 -11.3 -2.80622 | ACGACTCTTATGTCA TTCCCGC GAAA GCGGGAA TCTAGTAAAATCTAT TERM 463 550203 - 550228 + F 82 -7.1 -4.77775 | opp_overlap 550203 550204, overlap 550204 GGGAATCTAGTAAAA TCTATAAAAAA CTTG TTTTTTATAGG TTTATTTTATCAAAT TERM 464 550204 - 550227 + F 73 -8.4 -3.45581 | opp_overlap 550203 550204, overlap 550203 GGAATCTAGTAAAAT CTATAAAAAA CTTG TTTTTTATAG GTTTATTTTATCAAA TERM 465 550227 - 550204 - f 70 -8.4 -3.18105 | opp_overlap 550204 550203, overlap 550203 GGAATCTAGTAAAAT CTATAAAAAA CTTG TTTTTTATAG GTTTATTTTATCAAA TERM 466 550530 - 550540 + G 71 -5.4 -4.71426 | opp_overlap 550528 550530 TGAATATTATCAATA TAGC AAT GCTA TTTTCTTAATAACGA TERM 467 550611 - 550648 + G 74 -8.5 -3.26433 | opp_overlap 550608, overlap 550613 TTCAAAAACGATCGG AAGCTTTGCCGGTTATA GCTT TGTAATCGGCGGAGCTG TTGGTAATCTAATTG TERM 468 550613 - 550646 + G 85 -11.1 -3.19117 | opp_overlap 550608, overlap 550611 CAAAAACGATCGGAA GCTTTGCCGGTTATA GCTT TGTAATCGGCGGAGC TGTTGGTAATCTAAT lspA 550300 - 550920 + | lipoprotein signal peptidase RC0559 551073 - 551321 + | hypothetical protein TERM 469 552388 - 552400 + G 77 -7.7 -4.00468 | AGACCTGCAAAATTC GCTTG TAT CAAGC TTTATGCATTATGCT murD 551492 - 552994 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 470 552998 - 553015 + F 81 -2.8 -5.80727 | opp_overlap 552998, overlap 552991 552988 GGGTCTAGTTAAAAA TACTAA ATAATA TTAGTA TTTTTTATTGTTTTT ftsW 553111 - 554259 + | cell division protein ftsW TERM 471 554420 - 554391 - g 72 -8.8 -3.16659 | opp_overlap 554390 554391 554393, overlap 554390 554386 554393 AAACAATATATAAAG CAGGATATGAAA GTAATT TTTCATATCCTA GATTTAAAACGCTCA TERM 472 554393 - 554418 + G 77 -9.9 -2.64274 | opp_overlap 554393 554391 554390 554386, overlap 554391 554390 ACAATATATAAAGCA GGATATGAAAG TAAT TTTTCATATCC TAGATTTAAAACGCT TERM 473 554418 - 554393 - g 74 -9.2 -3.11905 | opp_overlap 554391 554390 554393, overlap 554391 554390 554386 ACAATATATAAAGCA GGATATGAAA GTAATT TTTCATATCC TAGATTTAAAACGCT TERM 474 554653 - 554631 - g 70 -6.4 -4.32607 | opp_overlap 554646 GGAAAAGTTAATAAA TTTTTTGCAA GCT TTGCTAAAAA GATAGCTATTTCTTA murG 554256 - 555386 + | N-acetylglucosaminyl transferase RC0563 555781 - 556431 + | hypothetical protein TERM 475 557116 - 557152 + T 76 -6.9 -4.45485 | opp_overlap 557126, overlap 557120 557120 557126 CTTGTCCACGGGAGC TAGTCAAAAATACTAAT ATT ATTAGTATTTTTAGTTA TTTTCTGGATATCGT TERM 476 557120 - 557149 + T 77 -7.5 -4.33785 | gap 1, opp_overlap 557126, overlap 557120 557116 557126 TCCACGGGAGCTAGT C-AAAAATACTAAT ATT ATTAGTATTTTTAG TTATTTTCTGGATAT TERM 477 557126 - 557142 + T 83 -6.7 -5.07971 | opp_overlap 557126, overlap 557120 557120 557116 GGAGCTAGTCAAAAA TACTAAT ATT ATTAGTA TTTTTAGTTATTTTC TERM 478 557142 - 557126 - T 78 -6.7 -4.67353 | opp_overlap 557126 557120 557120 557116 GGAGCTAGTCAAAAA TACTAAT ATT ATTAGTA TTTTTAGTTATTTTC RC0564 557483 - 557289 - | RND efflux transporter RC0565 558206 - 557487 - | RND efflux transporter RC0566 558677 - 558213 - | RND efflux transporter RC0567 559237 - 558725 - | RND efflux transporter RC0568 559938 - 559429 - | RND efflux transporter RC0569 560225 - 560007 - | RND efflux transporter RC0570 561066 - 560770 - | hypothetical protein RC0571 561572 - 561354 - | hypothetical protein RC0572 562016 - 561639 - | hypothetical protein RC0573 562528 - 562286 - | hypothetical protein TERM 479 562443 - 562463 + g 78 -9.7 -3.27298 | TTAGTAAGGTTAAGC TGTGCTTGC GCT GCTAGCACA TTACTCATTGCCAGC RC0574 562726 - 562547 - | hypothetical protein capM2 563961 - 562945 - | capM protein RC0576 564245 - 563961 - | hypothetical protein TERM 480 564267 - 564293 + r 74 -3.1 -5.43866 | gap 1 TCTAGAGTGCTTTCA TGTGCAT-GTTT AAAG AAACTATGCCCA TTTTTTTGAAGGTTC RC0577 564517 - 564242 - | hypothetical protein RC0578 564844 - 564650 - | hypothetical protein dapF 564933 - 565745 + | diaminopimelate epimerase RC0580 565720 - 566985 + | hypothetical protein TERM 481 567094 - 567080 - f 88 -4.3 -5.73672 | opp_overlap 567080 AAATAATTAAAAAAA TTCTG ATTTA CAGAA TTTTTAACTGGATTG pheS 567226 - 568275 + | phenylalanyl-tRNA synthetase subunit alpha TERM 482 568967 - 568953 - g 70 -4.2 -5.08015 | AATTTAAAAAATAAA CCAAGC CCT GATTGG TTACGAAAATTATTA TERM 483 569185 - 569158 - g 77 -9.2 -3.2024 | gap 1, overlap 569133 569156 569154 GACAACAAAATGAGA TTGCCACGGCTGC TTT GCAGCC-TCGCAA TGACGTAGCTAAATG pheT 568272 - 570728 + | phenylalanyl-tRNA synthetase subunit beta TERM 484 571325 - 571302 - g 74 -6.1 -4.49317 | AAAACAAATAAAGAA TTTTGGAGT TATATT ACCCCAAAA AAGTGCAGAGGAAAT dnaN 570733 - 571872 + | DNA polymerase III subunit beta TERM 485 572076 - 572122 + F 100 -10.9 -5.41143 | gap 1, opp_overlap 572076 572077, overlap 572077 572080 TGAGAAATAATTAAA TCTGCCCTATGTTCATGCCCGC CTAT GCGGGCATGA-CATCGAGTGGG TTTTTTTGAGCCATA TERM 486 572122 - 572076 - f 70 -6.5 -4.18044 | gap 1, opp_overlap 572076 572077 572080, overlap 572077 TGAGAAATAATTAAA TCTGCCCTATGTTCATGCCCGC CTAT GCGGGCATGA-CATCGAGTGGG TTTTTTTGAGCCATA TERM 487 572077 - 572121 + F 100 -12.2 -3.83963 | gap 1, opp_overlap 572076 572077, overlap 572076 572080 GAGAAATAATTAAAT CTGCCCTATGTTCATGCCCGC CTAT GCGGGCATGA-CATCGAGTGG GTTTTTTTGAGCCAT TERM 488 572121 - 572077 - f 78 -10 -3.09742 | gap 1, opp_overlap 572077 572076 572080, overlap 572076 GAGAAATAATTAAAT CTGCCCTATGTTCATGCCCGC CTAT GCGGGCATGA-CATCGAGTGG GTTTTTTTGAGCCAT TERM 489 572080 - 572118 + F 100 -12.5 -2.99257 | gap 1, opp_overlap 572077 572076, overlap 572077 572076 AAATAATTAAATCTG CCCTATGTTCATGCCCGC CTAT GCGGGCATGA-CATCGAG TGGGTTTTTTTGAGC RC0584 572227 - 572736 + | hypothetical protein TERM 490 572835 - 572808 - f 74 -9.2 -2.80443 | gap 1, overlap 572784 GGATATTTGATGAGA TTGCCGTGCAGTC TAC GACTGCTCG-CAA TGACAATGCAGTATA TERM 491 572932 - 572913 - g 79 -5 -5.29445 | TGGCAAGAAGAAAAA GCTTTTGA GGTA TCAAACGC GAGTAGCAAGCCAAA leuS 572865 - 575372 + | leucyl-tRNA synthetase TERM 492 575531 - 575551 + T 72 -9 -3.01497 | overlap 575527 575539 TTTTTGAATCTGTCA TCCCGTGA CTTGA TCGCGGGA TCTAGTTTAAAATAC RC0586 576048 - 575890 - | hypothetical protein rnd2 576923 - 576312 - | ribonuclease D TERM 493 577051 - 577030 - R 100 -7.3 -6.32976 | AAAAAAATAAAAAAA GACTGGATC TTGC GATCAAGTC GCGGGATTACAACAA RC0588 577379 - 577074 - | hypothetical protein cdsA 578068 - 577376 - | phosphatidate cytidylyltransferase TERM 494 577578 - 577562 - GR 72 -6.7 -4.10934 | opp_overlap 577572 ACAACTAATTATAAA CAAATAA ATT TTATTTG AAAAATAGTAATTTT TERM 495 577695 - 577711 + gr 90 -10.9 -3.66666 | TTAGGACTAAGTTTT GGAGCAA GTT TTGCTCC TTTAAAAGTTTTGCC RC0590 578735 - 578028 - | undecaprenyl pyrophosphate synthetase RC0591 578874 - 578713 - | hypothetical protein envZ 580320 - 578881 - | osmolarity sensor protein envZ TERM 496 580192 - 580180 - GR 71 -7.7 -3.40112 | opp_overlap 580179 AGCATATTTCAAAGA GCTTG ATA CAAGC GAATTTTTCAAGATT ompR 580975 - 580295 - | petR protein TERM 497 581017 - 581041 + H 81 -10 -3.48593 | overlap 581019 GTATTTCACTATTGT CATCCCGTGG CTTGA CCACGGGATC TTATGTCGCAGGCTG TERM 498 581019 - 581039 + H 100 -12.6 -3.31726 | overlap 581017 ATTTCACTATTGTCA TCCCGTGG CTTGA CCACGGGA TCTTATGTCGCAGGC ilvE 581191 - 582063 + | branched-chain amino acid aminotransferase TERM 499 582185 - 582201 + F 72 -8.1 -3.31144 | overlap 582188 TGAGATTGCTTCGTC GAATTAC TAC GTAATTC TTCTCGCAATGACGA dapA 582251 - 583135 + | dihydrodipicolinate synthase smpB 583132 - 583590 + | SsrA-binding protein TERM 500 583636 - 583676 + F 93 -11.4 -3.3907 | gap 1, opp_overlap 583632, overlap 583637 TTTGTTACATAGCTC GTTT-TATGTCATTCCCGC TTTC GCGGGAATGACATATAGAA TTACTTAGACTTTAG TERM 501 583637 - 583675 + F 100 -14.9 -2.6296 | gap 1, opp_overlap 583632, overlap 583636 TTGTTACATAGCTCG TTT-TATGTCATTCCCGC TTTC GCGGGAATGACATATAGA ATTACTTAGACTTTA RC0597 583721 - 584512 + | putative thiol:disulfide interchange protein dsbA sucD 585623 - 584745 - | succinyl-CoA synthetase subunit alpha TERM 502 585669 - 585692 + r 81 -3.8 -5.62552 | opp_overlap 585664, overlap 585670 TTTGATATCATCCCG CGACTTGATC GCGT GATCCAGTCC TTTTTTAATTTTTTT TERM 503 585670 - 585691 + r 74 -7.3 -3.92041 | opp_overlap 585664, overlap 585669 TTGATATCATCCCGC GACTTGATC GCGT GATCCAGTC CTTTTTTAATTTTTT sucC 586959 - 585799 - | succinyl-CoA synthetase subunit beta RC0600 587411 - 586992 - | hypothetical protein RC0601 587619 - 587368 - | hypothetical protein RC0602 588246 - 587938 - | hypothetical protein TERM 504 588346 - 588310 - R 72 -4 -5.17576 | opp_overlap 588320, overlap 588313 588320 CAGGAATCTAAAAAA CAATAAAAAATACTAA AATTA TTAGTATTTTTAACTA GATCCCATGGGCAAG TERM 505 588343 - 588313 - R 73 -5.7 -4.67173 | opp_overlap 588320, overlap 588310 588320 GAATCTAAAAAACAA TAAAAAATACTAA AATTA TTAGTATTTTTAA CTAGATCCCATGGGC TERM 506 588336 - 588320 - R 85 -3.8 -5.80727 | opp_overlap 588320, overlap 588313 588310 AAAAACAATAAAAAA TACTAA AATTA TTAGTA TTTTTAACTAGATCC RC0603 590431 - 588401 - | acylamino-acid-releasing enzyme TERM 507 589920 - 589934 + g 74 -7.2 -4.15066 | TAAATCAGTTCTTTT TCTAGA GTA TCTAGA TTTAATTTGTAAATA TERM 508 590461 - 590505 + r 72 -8.8 -2.93901 | gap 1, overlap 590455 TATTTAGTTTTATAG TCTTTTGA-TGTCATTCCCGC TTCC GCGGAAATGACATTCAGAAAA TATAATTGCTACACT RC0604 591149 - 590514 - | hypothetical protein TERM 509 590726 - 590710 - G 74 -2.9 -5.48825 | opp_overlap 590711, overlap 590711 GATGAGTCAAAAAAA TCACCAT AGG ACGGTGT TATTTTTTCAAATTC TERM 510 591205 - 591172 - R 70 -5.6 -4.26076 | opp_overlap 591172 591165 591164, overlap 591177 591193 TTATTTTTATTAAAA GATTATTTTTATAT TTTAAT ATAAAAAAATAATC TTTTAAAGTTATTTA TERM 511 591172 - 591205 + r 70 -5.6 -4.2573 | opp_overlap 591172 591177 591193, overlap 591165 591164 TTATTTTTATTAAAA GATTATTTTTATAT TTTAAT ATAAAAAAATAATC TTTTAAAGTTATTTA TERM 512 591416 - 591402 - R 71 -7.2 -3.72576 | opp_overlap 591401 591402 GGCTGTTGTACTAAA GCTTAA TTT TTAAGC GTTTTTAGTATAACG RC0605 591982 - 591473 - | hypothetical protein TERM 513 591632 - 591614 - G 71 -3.2 -5.26918 | ATATGCTACAAAAAA TTCTGT AGTTAAA ACAGAA AGGTATAAAGCATAT TERM 514 592054 - 592014 - R 70 -5.7 -4.24786 | opp_overlap 592020 592047, overlap 592017 592020 592047 CCCATAAGATATAAA TAACAAGATTATCAATAAC TTA ATTATTGATAATCTTTGCA TCAATGATATTAAAA TERM 515 592051 - 592017 - R 91 -9.6 -4.22858 | opp_overlap 592020 592047, overlap 592014 592020 592047 ATAAGATATAAATAA CAAGATTATCAATAAC TTA ATTATTGATAATCTTT GCATCAATGATATTA TERM 516 592020 - 592048 + r 85 -10.6 -3.67296 | opp_overlap 592017 592014 592020 592047, overlap 592047 AGATATAAATAACAA GATTATCAATAA CTTAA TTATTGATAATC TTTGCATCAATGATA TERM 517 592048 - 592020 - R 100 -11.3 -4.19887 | opp_overlap 592020 592047, overlap 592017 592014 592047 AGATATAAATAACAA GATTATCAATAAC TTA ATTATTGATAATC TTTGCATCAATGATA TERM 518 592532 - 592544 + r 81 -3.5 -5.54894 | opp_overlap 592520 592528 592532 592539 AAATATTAAAACAAT TTATT AAT AATAA TTTTTTTAATAAATT rbfA 592937 - 592575 - | ribosome-binding factor A RC0607 593368 - 592934 - | hypothetical protein TERM 519 593105 - 593083 - G 85 -8 -4.71828 | opp_overlap 593081 593079 593083 ATGCCATTAAGAAAA TTATAAATAT CTC ATATTTATAA TATAGTTTTGTTAAA TERM 520 593083 - 593105 + g 71 -8 -3.18634 | opp_overlap 593083, overlap 593081 593079 ATGCCATTAAGAAAA TTATAAATAT CTC ATATTTATAA TATAGTTTTGTTAAA RC0608 593511 - 594032 + | hypothetical protein recR 594180 - 594785 + | recombination protein RecR RC0610 596174 - 595668 - | hypothetical protein TERM 521 596067 - 596079 + gT 79 -4.9 -5.1963 | opp_overlap 596067 GTATTCAAAAAATAT TTCTA CTT TAGAA TTTTTATTAATTAAA RC0611 596311 - 596090 - | hypothetical protein TERM 522 596190 - 596203 + gr 71 -4.5 -4.80656 | TCCAATAGCTTTTTT GGGGT TTTT ACCTC TTTTATCTTCTTAAT TERM 523 596353 - 596371 + r 83 -9 -4.08692 | opp_overlap 596356, overlap 596356 TGGAGCTTTACGTGA TAACCATA AAA TATGGTTA TTTTCAGAAAAGTTA TERM 524 596356 - 596368 + r 70 -6.3 -4.17048 | opp_overlap 596356, overlap 596353 AGCTTTACGTGATAA CCATA AAA TATGG TTATTTTCAGAAAAG TERM 525 596401 - 596446 + r 81 -8.5 -4.09805 | opp_overlap 596409, overlap 596405 596409 AATAGAAGACTTGAT TTCATATATGATGCCTAGTTA TTTT TAACAAGGCATCATACATTAG TTTAATTCTTAGTCA TERM 526 596405 - 596442 + r 93 -11.5 -3.65261 | opp_overlap 596409, overlap 596401 596409 GAAGACTTGATTTCA TATATGATGCCTAGTTA TTTT TAACAAGGCATCATACA TTAGTTTAATTCTTA TERM 527 596409 - 596438 + r 100 -12.3 -2.64536 | opp_overlap 596409, overlap 596405 596401 ACTTGATTTCATATA TGATGCCTAGTTA TTTT TAACAAGGCATCA TACATTAGTTTAATT TERM 528 596438 - 596409 - R 100 -12.3 -2.89683 | opp_overlap 596405 596401 596409 ACTTGATTTCATATA TGATGCCTAGTTA TTTT TAACAAGGCATCA TACATTAGTTTAATT ppnK 597254 - 596487 - | inorganic polyphosphate/ATP-NAD kinase TERM 529 597250 - 597262 + g 75 -4.9 -5.10526 | GCTATTTTATTTATA TTCAT TAT ATGAA TTTCTTTTTTAATAT RC0613 597341 - 599023 + | hypothetical protein RC0614 599371 - 598982 - | hypothetical protein TERM 530 599115 - 599140 + gF 100 -10.7 -4.30978 | opp_overlap 599115 TATTTGATAAAAAAA CCATATAAAAA CTTG TTTTTATATGG TTTTACTGGATTCCC TERM 531 599140 - 599115 - Gf 100 -10.7 -5.626 | opp_overlap 599115 TATTTGATAAAAAAA CCATATAAAAA CTTG TTTTTATATGG TTTTACTGGATTCCC gpsA 599232 - 600209 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 532 600287 - 600273 - fH 70 -5.8 -4.33755 | opp_overlap 600273 AGCAATACCAATAAA TATGAA AAT TTCATA TTAAATTAGATACCT RC0616 600434 - 601363 + | hypothetical protein RC0617 601432 - 602304 + | hypothetical protein TERM 533 602413 - 602438 + F 100 -9.3 -4.92314 | opp_overlap 602413 ATTTAATACAATAAA CATATAAAAAA ACTG TTTTTTATATG TTTTTCTGGATTCCT TERM 534 602438 - 602413 - f 100 -9.3 -4.46675 | opp_overlap 602413 ATTTAATACAATAAA CATATAAAAAA ACTG TTTTTTATATG TTTTTCTGGATTCCT trxB1 602503 - 603435 + | thioredoxin reductase TERM 535 603423 - 603441 + F 75 -4.7 -5.1287 | opp_overlap 603423 603429 TGAGGCTGAAAAATT TCTAAAT AAATA ATTTAGA TTTTTTAGCTGTAAA RC0619 603662 - 603958 + | hypothetical protein RC0620 604279 - 604488 + | hypothetical protein TERM 536 605950 - 605932 - g 87 -10.4 -3.57144 | CCCGTTACCTGCAAA TGCAAAAG CAC CTTTTGCA GGACGTAAAGCTTCA gabD 604613 - 606040 + | succinate semialdehyde dehydrogenase TERM 537 606069 - 606086 + F 76 -9.9 -2.78935 | GTTCCTTTTATGTCA TTCCTGC GAAA GCAGGAA TCTAGTAAAGAATAT RC0622 606194 - 606406 + | hypothetical protein lgtD 606531 - 607376 + | glycosyl transferase TERM 538 607497 - 607531 + G 78 -9.4 -3.34895 | opp_overlap 607502, overlap 607502 TAAATCCAGAGCAGC AAAAAGCAGTTCTTCA CAC TGAAGGACCGCTTTTA TTGCTTGCAGGTGCA TERM 539 607526 - 607502 - g 93 -9.3 -4.79223 | opp_overlap 607497 607502 CCAGAGCAGCAAAAA GCAGTTCTTCA CAC TGAAGGACCGC TTTTATTGCTTGCAG TERM 540 607502 - 607526 + G 93 -9.3 -4.78572 | opp_overlap 607502, overlap 607497 CCAGAGCAGCAAAAA GCAGTTCTTCA CAC TGAAGGACCGC TTTTATTGCTTGCAG TERM 541 608973 - 608958 - g 85 -4.7 -5.64873 | overlap 608969 TTCAAGAAGAAAAAA CCGAA GAAGCA TTCGG TAGAATCGAAAATAT uvrD 607454 - 609415 + | DNA helicase II TERM 542 609547 - 609535 - g 72 -4.9 -4.90525 | overlap 609530 TAACCTTAAAGAAAA TGTTT CAG AAACA ACATTAGGTAACTAC RC0625 609449 - 609973 + | hypothetical protein RC0626 610087 - 610257 + | hypothetical protein TERM 543 611108 - 611098 - g 75 -2.6 -5.69473 | TAGATTAGAAAAAAA TAAT AAA ATTA GTAAGCAATTAGAAC RC0627 610349 - 611701 + | hypothetical protein TERM 544 611755 - 611776 + T 72 -8.7 -3.00342 | ACATTGCTTCTATGT CATTCCCGC GAAA GCGGGAATC TAGATTTTTTATTGT TERM 545 611792 - 611816 + T 93 -11.4 -3.48593 | overlap 611794 TAGATTTTTTATTGT CACCCCGTGG CGTGA CCACGGGGTC TTGTATCACCAGCTG TERM 546 611794 - 611814 + T 100 -14 -3.31726 | overlap 611792 GATTTTTTATTGTCA CCCCGTGG CGTGA CCACGGGG TCTTGTATCACCAGC tdcB 612909 - 611878 - | threonine dehydratase lon 612992 - 615331 + | ATP-dependent protease La TERM 547 615566 - 615602 + F 100 -10.5 -4.82901 | opp_overlap 615576, overlap 615576 TTTGACCATGGGATC CAGTTAAAAATACTAAT ATT ATTAGTATTTTTTATTG TTTTTATGGACCCCG TERM 548 615576 - 615592 + F 95 -6.7 -5.80727 | opp_overlap 615576, overlap 615566 GGATCCAGTTAAAAA TACTAAT ATT ATTAGTA TTTTTTATTGTTTTT TERM 549 615592 - 615576 - f 78 -6.7 -4.67353 | opp_overlap 615566 615576 GGATCCAGTTAAAAA TACTAAT ATT ATTAGTA TTTTTTATTGTTTTT RC0630 616015 - 616167 + | putative cell surface antigen TERM 550 616394 - 616362 - f 89 -11.7 -2.64155 | opp_overlap 616359 616361 616366 616369, overlap 616359 616366 616369 616372 CTCCTCTTAAATTTA TTAATAATAATGTTA CGT CAACATTATTATTAA ATTGCTACCGGAGTC TERM 551 616390 - 616366 - f 72 -8.1 -3.25088 | opp_overlap 616359 616366 616361 616369, overlap 616359 616362 616369 616372 TCTTAAATTTATTAA TAATAATGTTA CGT CAACATTATTA TTAAATTGCTACCGG RC0631 616623 - 617393 + | putative cell surface antigen RC0632 618155 - 617892 - | hypothetical protein TERM 552 618799 - 618827 + H 70 -8.3 -3.08812 | overlap 618798 TCACTACTAGTTGAA GCCTTGAAAATTA TTA TACTTTTTAAGGC CTTTGTTAAAAAAGA RC0633 618908 - 619216 + | hypothetical protein TERM 553 619307 - 619268 - f 70 -6 -4.33928 | gap 1, opp_overlap 619268 619273 619275, overlap 619273 TACTCTAAATATAAA TTAATTGTATAGGTGTTAC TTA GTAACGCCTATAT-ATTAA TTATTTCAGATTATA TERM 554 619268 - 619307 + F 93 -10.4 -3.97689 | gap 1, opp_overlap 619268 619273, overlap 619273 619275 TACTCTAAATATAAA TTAATTGTATAGGTGTTAC TTA GTAACGCCTATAT-ATTAA TTATTTCAGATTATA TERM 555 619273 - 619303 + F 100 -12.8 -3.62054 | opp_overlap 619268 619273, overlap 619268 619275 TAAATATAAATTAAT TGTATAGGTGTTAC TTA GTAACGCCTATATA TTAATTATTTCAGAT TERM 556 619275 - 619301 + F 100 -13.2 -3.38135 | opp_overlap 619273 619268, overlap 619273 619268 AATATAAATTAATTG TATAGGTGTTAC TTA GTAACGCCTATA TATTAATTATTTCAG TERM 557 619867 - 619888 + G 74 -6.7 -4.21631 | CGTATCAATATAGTT TATTATCGT AAAG ACGGTAATA TTTCTTGGGTAGATT yhbH 619333 - 619911 + | sigma(54) modulation protein RC0635 620030 - 620422 + | hypothetical protein folD 621319 - 620453 - | methylenetetrahydrofolate dehydrogenase trxB2 622478 - 621456 - | thioredoxin reductase RC0638 623130 - 623498 + | putative late-developmental spore coat protein RC0639 623600 - 623911 + | hypothetical protein RC0640 624011 - 624457 + | hypothetical protein RC0641 624578 - 625012 + | hypothetical protein RC0642 625016 - 625237 + | hypothetical protein RC0643 625482 - 625703 + | hypothetical protein RC0644 625750 - 626010 + | hypothetical protein RC0645 625982 - 626218 + | hypothetical protein TERM 558 626450 - 626487 + F 100 -12.9 -4.40963 | overlap 626447 626451 GACTAAAAACGCTCC GTTGTCATACCGTGG CTTGACCA CCACGGTATGACAAA TTCTTTTTAAGCAAT TERM 559 626451 - 626486 + F 100 -16.4 -3.23855 | overlap 626450 626447 ACTAAAAACGCTCCG TTGTCATACCGTGG CTTGACCA CCACGGTATGACAA ATTCTTTTTAAGCAA RC0646 626732 - 627025 + | hypothetical protein TERM 560 628631 - 628619 - g 71 -7.7 -3.47392 | opp_overlap 628619, overlap 628617 CAAATGAAAAAAGTA CCGAT AGA ATCGG TTATGGCAAAAGTTT TERM 561 629026 - 629014 - g 70 -6.3 -4.27297 | overlap 629006 629012 CGAAGAAGAAAAACA GGTTT TCA AAACC GCTTACGAAATTGAT nrdA 627506 - 629329 + | ribonucleotide-diphosphate reductase subunit alpha TERM 562 629583 - 629573 - gf 70 -8.2 -3.12327 | opp_overlap 629572 TGTTGAGATGCAAGA CGGC TAT GCCG ATGCTTCTTTAGCAA RC0648 629403 - 629798 + | hypothetical protein RC0649 629752 - 629934 + | hypothetical protein RC0650 629990 - 630334 + | hypothetical protein nrdF 630190 - 631176 + | ribonucleotide-diphosphate reductase subunit beta TERM 563 633043 - 633033 - g 70 -4 -5.0538 | CTCTAGCTCAAAAAA CAAA TTA TTTG GAAGGGCAATTGCCG TERM 564 633337 - 633316 - g 73 -8.9 -2.96237 | opp_overlap 633319, overlap 633315 633319 TAATTTTAAAAATAT TAATTTAGC AGAG GCTAAATTA CCTGATAATTTAATG RC0652 631325 - 634174 + | hypothetical protein RC0653 634602 - 634850 + | hypothetical protein RC0654 635192 - 635404 + | hypothetical protein RC0655 635405 - 635563 + | hypothetical protein miaA 637299 - 636208 - | tRNA delta(2)-isopentenylpyrophosphate transferase exoC 639192 - 637804 - | phosphomannomutase abcT2 640084 - 639362 - | ABC transporter ATP-binding protein TERM 565 640155 - 640144 - R 74 -3 -5.44119 | GTCATTGCAAAAAAA TTAC GTAA GTAA TTGACGAAGCAATCC RC0659 640854 - 640270 - | hypothetical protein RC0660 641419 - 640823 - | hypothetical protein kpsF 642384 - 641425 - | kpsF protein TERM 566 641658 - 641668 + g 76 -5.4 -5.10064 | CAGTTATAATTCCCA CCAA ATT TTGG TTTTTATCTGTTACA RC0662 642565 - 642389 - | hypothetical protein pnp 644833 - 642584 - | polynucleotide phosphorylase/polyadenylase TERM 567 644308 - 644319 + g 70 -4.4 -4.77036 | opp_overlap 644308 CTGCAACTACTAAAT CAAG CTGA CTTG TTTTTAATAATGCAA rpsO 645256 - 644981 - | 30S ribosomal protein S15 truB 646329 - 645292 - | tRNA pseudouridine synthase B TERM 568 646234 - 646253 + g 81 -2.2 -5.90981 | gap 1, overlap 646237 AGTACCGGCATGTCC TATCTTGGT TTT ACCGAG-TA TTTTTTTTACTATGC TERM 569 646237 - 646251 + g 76 -6.4 -4.59226 | overlap 646234 ACCGGCATGTCCTAT CTTGGT TTT ACCGAG TATTTTTTTTACTAT TERM 570 646617 - 646629 + G 87 -7.7 -4.7416 | TACTATGATCGGTGC CGAGA TTA TCTCG TTTTTGAAGTTTTGG TERM 571 647751 - 647737 - g 76 -3.5 -5.48028 | GAAATAAAAATAAAA GGCAA AGCTG CTGCC GACGTGATAGGTACA tlc4 646414 - 647949 + | ADP,ATP carrier protein TERM 572 649960 - 649950 - g 71 -5.4 -4.66537 | CTCCTGAAGATAAAA TGCT TAT AGCA GTAGGTGATAAGGTT sca4 648230 - 651310 + | cell surface antigen TERM 573 651375 - 651348 - T 73 -8.4 -3.41234 | opp_overlap 651345 651344 651348 TATCAAGGCAAGCAA TGTTATTCCCGC TTCT GCGGGGATGACA TAAATTATATCACAA TERM 574 651348 - 651375 + T 100 -12.8 -2.63079 | opp_overlap 651348, overlap 651345 651344 TATCAAGGCAAGCAA TGTTATTCCCGC TTCT GCGGGGATGACA TAAATTATATCACAA RC0668 651806 - 651429 - | hypothetical protein RC0669 652032 - 651874 - | hypothetical protein RC0670 652328 - 653155 + | hypothetical protein RC0671 654138 - 653305 - | hypothetical protein RC0672 654137 - 654859 + | hypothetical protein RC0673 654963 - 655127 + | hypothetical protein RC0675 655863 - 655636 - | hypothetical protein def2 655152 - 655703 + | polypeptide deformylase RC0676 655909 - 656163 + | hypothetical protein RC0677 656167 - 656475 + | hypothetical protein addA 657243 - 656548 - | hypothetical protein RC0679 659287 - 657479 - | hypothetical protein TERM 575 657525 - 657538 + g 78 -6.7 -4.50943 | opp_overlap 657524 TTTGTTTCTATAATC GCTTC TTTA GAAGC TTTTATGCATTCTTG TERM 576 659411 - 659375 - R 88 -7.6 -5.00884 | opp_overlap 659385, overlap 659385 ACGGGGTCCAAAAAA CAATAAAAAATACTAA TAATT TTAGTATTTTTAACTG GATCCCGTGGTCAAG TERM 577 659401 - 659385 - R 85 -3.8 -5.80727 | opp_overlap 659385, overlap 659375 AAAAACAATAAAAAA TACTAA TAATT TTAGTA TTTTTAACTGGATCC TERM 578 659768 - 659736 - R 90 -8 -5.06451 | opp_overlap 659740, overlap 659740 GAGGATCCCAAAAAA TAAACCTATAAAAA CAAGT TTTTTATAGGTTTT ACTGGATTCCCGGTT TERM 579 659740 - 659764 + r 84 -8.8 -4.30978 | opp_overlap 659740 659736 ATCCCAAAAAATAAA CCTATAAAAA CAAGT TTTTTATAGG TTTTACTGGATTCCC TERM 580 659764 - 659740 - R 100 -8.8 -5.05153 | opp_overlap 659740, overlap 659736 ATCCCAAAAAATAAA CCTATAAAAA CAAGT TTTTTATAGG TTTTACTGGATTCCC glmU 660613 - 659867 - | UDP-N-acetylglucosamine pyrophosphorylase RC0681 661371 - 660610 - | hypothetical protein TERM 581 661035 - 661048 + g 77 -4.5 -5.21236 | overlap 661028 AACTAGAGCGTACTT CTGCA GCAG TGCGG TTTTTATTATCGGTT rpmJ 661704 - 661579 - | 50S ribosomal protein L36 TERM 582 661954 - 661966 + H 75 -5.5 -4.71061 | opp_overlap 661954, overlap 661964 AAGTATTTAAAAATA CCATG TTT CGTGG TTTTTAACTATAAAT RC0683 662011 - 662190 + | hypothetical protein RC0684 662441 - 662650 + | hypothetical protein RC0685 662652 - 662891 + | hypothetical protein TERM 583 663093 - 663109 + F 70 -8.1 -3.19522 | TAATGATGCTGCTTG GGATTTA TAT TAAATCC TTACCTCTTAAATGC TERM 584 663309 - 663274 - g 70 -6.5 -4.30978 | gap 1, opp_overlap 663285, overlap 663285 GGCAATCCAGCAAAA CAATACAAAAATTCTG TAAAT CAGAATTTTT-TACTG GACTGCTTCGTCAAT TERM 585 663285 - 663299 + G 77 -4.3 -5.15634 | opp_overlap 663274 663285 AAAACAATACAAAAA TTCTG TAAAT CAGAA TTTTTTACTGGACTG TERM 586 663299 - 663285 - g 77 -4.3 -5.25799 | opp_overlap 663285, overlap 663274 AAAACAATACAAAAA TTCTG TAAAT CAGAA TTTTTTACTGGACTG RC0686 663207 - 664049 + | invasion protein RC0687 664054 - 664539 + | hypothetical protein TERM 587 665118 - 665106 - g 72 -3.3 -5.24799 | GCACAAAGACAAAAA CCGTT GTA ATCGG CATGATAGAGAGAAA RC0688 664862 - 665389 + | putative transposable insertion element RC0689 665527 - 665727 + | hypothetical protein TERM 588 666494 - 666470 - g 71 -2.2 -5.38951 | gap 1, overlap 666473 666474 AATGGATATAAAAAA GAAGCCTTGAA ATGT TTCAAGGAT-C AAGTTGGCAGTAATT TERM 589 666492 - 666473 - g 72 -5 -4.77122 | overlap 666470 666474 GGATATAAAAAAGAA GCCTTGAA ATGT TTCAAGGA TCAAGTTGGCAGTAA TERM 590 666491 - 666474 - g 76 -8.5 -3.44646 | overlap 666473 666470 GATATAAAAAAGAAG CCTTGAA ATGT TTCAAGG ATCAAGTTGGCAGTA RC0690 666020 - 666568 + | putative DNA adenine methyltransferase (MboA) TERM 591 666574 - 666564 - f 72 -2.6 -5.48028 | TAAATAAAAAGAAAA TATA GGT TATA CAAGTATATAATTCC RC0691 666660 - 666881 + | hypothetical protein bioC 667182 - 667862 + | biotin synthesis protein BioC TERM 592 667980 - 667953 - f 78 -9.2 -3.24365 | gap 1, overlap 667951 GGATATTTGACAAGA TTGCCACGCAGCC TAT GGCTGC-TTGCAA TGACGATCCAACAAT pdhD 668015 - 669394 + | dihydrolipoamide dehydrogenase TERM 593 669585 - 669569 - f 74 -6.7 -4.27686 | opp_overlap 669569, overlap 669559 TAAAACCACTCAAAA TACTAAT AAT ATTAGTA TTTTTAACTAGATCC TERM 594 669569 - 669585 + F 78 -6.7 -4.67353 | opp_overlap 669559 669569 TAAAACCACTCAAAA TACTAAT AAT ATTAGTA TTTTTAACTAGATCC TERM 595 669618 - 669598 - f 87 -11.2 -2.90723 | GTATTTTTAACTAGA TCCCACGA ACAAG TCGTGGGA TGACAGAGATGAAGC RC0694 669618 - 670208 + | putative 5-formyltetrahydrofolate cyclo-ligase RC0695 670304 - 670531 + | hypothetical protein TERM 596 670520 - 670531 + T 83 -3 -5.82172 | GAGATACAAGTTACA TTAG TGGG CTAA TTTTTTTCTATTCAT TERM 597 670552 - 670575 + T 78 -3.2 -5.56673 | opp_overlap 670552, overlap 670556 TTCTATTCATAATAG GCTACAAATT ATTT GATTTATAGC TTTTTTCTTATAAGT rnd 671428 - 670583 - | ribonuclease D RC0697 672268 - 671438 - | hypothetical protein TERM 598 672891 - 672870 - g 88 -6.5 -5.39221 | overlap 672872 ACAATAATTAAAAAA GACTGGACC CCGT GGTCAAGCC ACAGGGTGACAGAGG TERM 599 672903 - 672872 - g 76 -7.3 -4.30543 | gap 1, overlap 672870 AATAATTAAAAAAGA CTG-GACCCCGTGG TCAAG CCACAGGGTGACAG AGGGGGAACCGCCCC TERM 600 672919 - 672905 - g 71 -8.5 -2.89191 | CCACAGGGTGACAGA GGGGG AACCG CCCCC CTCAACAACATCTCC RC0698 672342 - 673346 + | hypothetical protein RC0699 673667 - 674005 + | hypothetical protein RC0700 674023 - 674511 + | hypothetical protein RC0701 674504 - 674668 + | hypothetical protein panF 675234 - 677165 + | sodium/pantothenate symporter TERM 601 677616 - 677648 + G 100 -15.3 -4.24948 | opp_overlap 677623 677626, overlap 677623 ATTTTGTATCTGATA TTGAAAAGAATATAA TAA TTATATTCTTTTCAA TTTTAACTGTGATCC TERM 602 677623 - 677641 + G 82 -7.6 -4.43272 | opp_overlap 677623 677626, overlap 677616 ATCTGATATTGAAAA GAATATAA TAA TTATATTC TTTTCAATTTTAACT TERM 603 677641 - 677623 - g 80 -7.6 -4.23758 | opp_overlap 677616 677623, overlap 677626 ATCTGATATTGAAAA GAATATAA TAA TTATATTC TTTTCAATTTTAACT RC0703 677297 - 677695 + | putative alkaline phosphatase synthesis sensor protein (phoR) RC0704 677738 - 677986 + | putative alkaline phosphatase synthesis sensor protein (phoR) TERM 604 678156 - 678144 - g 79 -3.5 -5.55664 | TTATTATGAAAAAAA TTATT TTT AATAA ACAACGAGATTTTAT TERM 605 678792 - 678760 - g 77 -9.9 -2.57564 | opp_overlap 678760, overlap 678759 678780 TCATTCCCGCAGAAG CGGGAATCCAGAA AAAATAA TACTGGATCCCCG TTTTCACGGGGATGA TERM 606 678760 - 678792 + G 77 -7.7 -4.08216 | opp_overlap 678759 678760 678780 TCATTCCCGCAGAAG CGGGAATCCAGAA AAAATAA TACTGGATCCCCG TTTTCACGGGGATGA TERM 607 678812 - 678780 - g 76 -6.4 -4.73105 | gap 1, opp_overlap 678760, overlap 678760 678759 ATCCAGAAAAAATAA TACTG-GATCCCCGT TTTC ACGGGGATGACAATA AAATTCTATTGCTTG mccF2 678041 - 679123 + | microcin C7 self-immunity protein TERM 608 680128 - 680117 - g 73 -4.4 -5.1244 | CTACCAATATAAAAA CTTC AACA GAAG CAGGCATAAAAGCCG hemC 679120 - 680175 + | porphobilinogen deaminase RC0707 680612 - 680788 + | hypothetical protein RC0708 680985 - 681185 + | hypothetical protein RC0709 681620 - 681928 + | hypothetical protein trpS 683085 - 682093 - | tryptophanyl-tRNA synthetase plsC 683163 - 683888 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase RC0712 683953 - 684393 + | hypothetical protein RC0713 685112 - 685831 + | hypothetical protein TERM 609 685944 - 685958 + T 82 -4.3 -5.60993 | opp_overlap 685944 GCAATCCAGTAAAAA TTCTG ATTTA CAGAA TTTTTTTATCACCAC RC0714 687065 - 686061 - | hypothetical protein RC0715 687813 - 687058 - | hypothetical protein RC0716 688501 - 687797 - | hypothetical protein RC0717 689090 - 688449 - | hypothetical protein TERM 610 688621 - 688605 - GR 83 -2.3 -5.95539 | overlap 688606 688608 TGCTAAAGAAAAAAA CCATATC CAA GATATAA GTATGCAAGTTAAGG TERM 611 689478 - 689463 - R 71 -3.3 -5.2189 | CCAATTATGAAAAAA GGTAT TGCTAT ATACC AAATCATAAAAATAA ampG1 690934 - 689681 - | ampG protein TERM 612 690050 - 690023 - G 71 -6.6 -4.01737 | opp_overlap 690023, overlap 690045 ATGAATAATACCAAA TAAAAATATACT ATTT AATATATTTTTA TGTTTCATAATAACC RC0719 691354 - 691175 - | hypothetical protein RC0720 691691 - 691891 + | putative lipopolysaccharide 1,2-glucosyltransferase (rfaJ) RC0721 691863 - 692057 + | putative lipopolysaccharide 1,2-glucosyltransferase (rfaJ) tlc3 692126 - 693631 + | ADP,ATP carrier protein TERM 613 693676 - 693703 + G 71 -7.8 -3.45592 | gap 1, overlap 693674 GATACCACCGAGTCA TTGCGA-GCAGTC GTA GACTGCGTGGCAA TCTTTCGTCAAAATT RC0723 693651 - 695453 + | hypothetical protein TERM 614 696497 - 696485 - g 70 -4.1 -4.9448 | AGTTATTAAATAAAA TTCCG GTT CAGAA TATTTATAAAGACTA ispB 695440 - 696555 + | octaprenyl-diphosphate synthase RC0725 698720 - 696882 - | putative aminopeptidase TERM 615 697373 - 697383 + g 85 -6.8 -4.93898 | GTCCTTTAAGTACTT GCGT ATA ACGC TTTTTCTGCTCATCT TERM 616 698439 - 698429 - G 74 -5.4 -4.74103 | CTTTTAAGTCAAAAA GCTT AAA AAGC TCTAAATCCAGCTCT TERM 617 698760 - 698790 + r 82 -7.1 -4.73105 | opp_overlap 698768, overlap 698768 GACGAAGCAATCCAG TTAAAAAATTCTG ATTTA CAGAATTTTTTTA TTATTTTTTCTGGAT TERM 618 698782 - 698768 - R 72 -4.3 -5.10497 | opp_overlap 698760 698768 AATCCAGTTAAAAAA TTCTG ATTTA CAGAA TTTTTTTATTATTTT TERM 619 698768 - 698782 + r 91 -4.3 -6.04419 | opp_overlap 698768, overlap 698760 AATCCAGTTAAAAAA TTCTG ATTTA CAGAA TTTTTTTATTATTTT potE 700145 - 698862 - | putrescine-ornithine antiporter TERM 620 700006 - 699989 - G 82 -8.5 -4.02581 | GGGTAGAAAATACAA GTGCTAT ACTC ATAGCAC CGAATAATGAAAGTA TERM 621 700274 - 700248 - H 74 -5.2 -4.87803 | overlap 700250 GATTTCTAAACAAAA GATTGATAGCTT TTT AAGCTATCAAAA ATAATCTTAGGAGTT TERM 622 700272 - 700250 - H 100 -12.2 -4.05678 | overlap 700248 TTTCTAAACAAAAGA TTGATAGCTT TTT AAGCTATCAA AAATAATCTTAGGAG RC0727 700293 - 700472 + | putative lysozyme hesB2 701527 - 701195 - | hesB protein nifU 701926 - 701531 - | scaffold protein TERM 623 702066 - 702039 - R 78 -9.2 -3.24365 | gap 1, overlap 702037 GGATATTTGACAAGA TTGCCACGCAGCC TAC GGCTGC-TCGCAA TGCCGATATTCTCAA spl1 703310 - 702078 - | cysteine desulfurase spl1 704531 - 703413 - | NifS protein RC0732 704947 - 704528 - | hypothetical protein RC0733 705650 - 705405 - | hypothetical protein RC0734 705898 - 705635 - | hypothetical protein RC0735 706710 - 705895 - | hypothetical protein RC0736 707771 - 706899 - | hypothetical protein RC0737 708231 - 708064 - | hypothetical protein RC0738 708393 - 708638 + | hypothetical protein TERM 624 708895 - 708873 - gf 89 -9.2 -4.29829 | ATAACGATGAACAAA TCCCCCAACA GTC TGTTGGAGAA ATTCCCTGGGGATAT RC0739 708803 - 709000 + | hypothetical protein RC0740 708921 - 709256 + | hypothetical protein RC0741 709451 - 709900 + | putative histon and other protein acetyltransferase RC0742 709897 - 710112 + | hypothetical protein RC0743 710146 - 710424 + | hypothetical protein TERM 625 710466 - 710478 + T 70 -6.3 -4.1891 | opp_overlap 710466 710465 AAGTCATTAACGAAT TTACC AAA GGTAA TTTATCTTGAGGAAA RC0744 711605 - 710577 - | isopentenyl pyrophosphate isomerase RC0745 712075 - 711884 - | hypothetical protein clpP 713291 - 712641 - | ATP-dependent Clp protease proteolytic subunit TERM 626 713119 - 713103 - G 74 -6.7 -4.20367 | opp_overlap 713106, overlap 713106 TGCTTCAAGAAACAA TAATTGT GCA ACAATTA AGTTTGCCATATGAT rpsA 715112 - 713406 - | 30S ribosomal protein S1 TERM 627 713552 - 713572 + g 71 -5.5 -4.69487 | overlap 713539 CGGTTGATTTCTCGA TAGAAACAA CTT TTGCTTCTA TTTCTTTGTCTATTT cmk 716026 - 715367 - | cytidylate kinase RC0749 716428 - 716252 - | hypothetical protein RC0750 717068 - 716838 - | hypothetical protein RC0751 717557 - 717240 - | hypothetical protein RC0752 718170 - 718012 - | hypothetical protein RC0753 718556 - 718344 - | hypothetical protein TERM 628 719095 - 719070 - R 70 -4.2 -4.87133 | ATTTTGTAAAGAAAA TACTAACTTT TTAATT AAAGTTAATA ACTTGAAGCATTTCT RC0754 719880 - 719134 - | hypothetical protein TERM 629 719704 - 719728 + g 100 -13.1 -3.694 | opp_overlap 719709, overlap 719700 719709 AAATCTTTCTTTATT TATAAGTGCAA GTT TTGCACTTATA TTCATTATTTTCGAT TERM 630 719709 - 719723 + g 79 -8.6 -3.80745 | opp_overlap 719709, overlap 719704 719700 TTTCTTTATTTATAA GTGCAA GTT TTGCAC TTATATTCATTATTT TERM 631 719723 - 719709 - G 74 -8.6 -3.35679 | opp_overlap 719709 719704 719700 TTTCTTTATTTATAA GTGCAA GTT TTGCAC TTATATTCATTATTT RC0755 720074 - 719883 - | hypothetical protein TERM 632 720371 - 720387 + r 71 -2.3 -5.37593 | overlap 720365 720373 TTCTTTTTCTCAATA TATCATT ATT GATGATG TTTTTTCCTTTAAAG RC0756 720644 - 720444 - | hypothetical protein himD 720893 - 720651 - | integration host factor beta-subunit TERM 633 720677 - 720701 + g 74 -5.2 -4.81249 | ATAAATTTTTAGGCA TTCTGTAATA AACCG TATTATAGAA TTTTTCGCTTTCAGG sppA 721810 - 720896 - | protease IV rho 723303 - 721927 - | transcription termination factor Rho RC0760 725010 - 723688 - | hypothetical protein recJ 726817 - 725054 - | single-stranded-DNA-specific exonuclease RecJ TERM 634 726933 - 726883 - RH 100 -31.5 -3.14132 | TGTTGCGTGGATCAA TTTCACCTCTGTTCACCCCGTGG TCAAG CCACGGGGTGAACAGAGGTGAAC GATATACACTTATAT prfA 728010 - 726943 - | peptide chain release factor 1 pdhC 729385 - 728147 - | branched-chain alpha-keto acid dehydrogenase subunit E2 RC0763 727763 - 728428 + | hypothetical protein TERM 635 728406 - 728423 + gT 79 -9.9 -2.8355 | overlap 728405 ATGGTAAACCCTCCG CCCTGAA ATTC TTCAGGG GTTAATTTATTATCT infC 730004 - 729531 - | translation initiation factor IF-3 TERM 636 729814 - 729836 + g 76 -3.4 -5.40004 | overlap 729815 729816 729830 ACGACGATTTTTTGT TTTTTGCGTG CTT CATGCAAACG TTTTTTGCTTTCGTA RC0766 730484 - 730155 - | hypothetical protein RC0767 730644 - 730471 - | hypothetical protein RC0768 730818 - 730648 - | hypothetical protein RC0769 730988 - 730833 - | hypothetical protein RC0770 731619 - 731053 - | hypothetical protein RC0771 731785 - 731522 - | hypothetical protein RC0772 732001 - 731813 - | hypothetical protein birA 732868 - 732056 - | biotin--protein ligase RC0774 733629 - 733147 - | hypothetical protein RC0775 734311 - 733691 - | hypothetical protein RC0776 734570 - 734295 - | hypothetical protein RC0777 734771 - 734610 - | hypothetical protein sodB 735405 - 734776 - | superoxide dismutase TERM 637 735101 - 735111 + g 70 -8.2 -3.11988 | overlap 735100 CCGCTTGGCTTACCT CCGC CCT GCGG CTTTATTGAATGCCA folC 736856 - 735576 - | folylpolyglutamate synthase bioY 737651 - 737109 - | BioY protein TERM 638 737531 - 737510 - G 70 -8.1 -3.14527 | overlap 737508 TAAGTCCGATGAATA TCACTGCAA CGGT TTGCAATGA AATAAATATAGGCTT TERM 639 737932 - 737922 - g 74 -5.4 -4.88736 | TACTATGTACAAAAA TTGC AAG GCAA AGGAAATGCTAATAT RC0781 737727 - 738479 + | putative N-terminal of biotin-protein ligase RC0782 739259 - 738591 - | putative glutathione S-transferase TERM 640 739564 - 739582 + H 75 -7.4 -4.14392 | overlap 739563 TGTTACCAACTTACC GGTACGCT CTT ACCGTACC TTTTCACCCTTACCA TERM 641 740995 - 741006 + G 70 -4.4 -4.75372 | opp_overlap 740995 ACAGGAGAAAAAAAG CTCT TTGG AGAG TTTTTAATAAATGCT TERM 642 741244 - 741233 - g 72 -5.8 -4.42748 | opp_overlap 741232 741233 GTACTGCAAAAAGAA CAGC CATC GCTG CTATTAATATTGCCG TERM 643 742549 - 742579 + G 79 -7 -4.66609 | opp_overlap 742578 AGAGATGATATTGCC TCTTTTCTTCCATA TTA TTTAGAAGAAAAGA TTTTTGAATCCGATC ppdK 740176 - 742824 + | pyruvate phosphate dikinase RC0784 743199 - 742975 - | hypothetical protein RC0785 743566 - 743973 + | hypothetical protein RC0786 744031 - 744282 + | hypothetical protein RC0787 744955 - 744653 - | hypothetical protein RC0788 745250 - 744942 - | putative MazG TERM 644 745033 - 745048 + g 72 -3.3 -5.16841 | AGATTTGGCAGGTTA TGCTT TTTGGT AAGCA TTTTTATTGCTCTCA RC0789 745668 - 745381 - | hypothetical protein RC0790 745658 - 745861 + | hypothetical protein TERM 645 745914 - 745929 + G 74 -6.2 -4.42788 | opp_overlap 745905 CTAGAACTGACAACC TCTTCT TAAC AGAAGA TTTTGTAAGATTACA RC0791 745871 - 746053 + | hypothetical protein RC0792 746144 - 746296 + | hypothetical protein RC0793 746350 - 746577 + | hypothetical protein RC0794 747152 - 746580 - | hypothetical protein TERM 646 747311 - 747331 + r 77 -7.7 -4.17523 | overlap 747330 TATTTGCCCCGGCAT CTAGTAATT TAA AATTACTGG TTTTCAACCTTATTT RC0795 747710 - 747498 - | hypothetical protein TERM 647 749150 - 749137 - g 74 -3.9 -5.28942 | opp_overlap 749143 749149, overlap 749143 GATCCCAAATAAAAA TAGAA TTAT TTCTA ATATCATTATTTTAC TERM 648 750200 - 750212 + G 82 -6.3 -5.00616 | overlap 750186 CTTACAGGATTTTTC GGTAA ATA TTACC TTTTTTACCAAGCAA TERM 649 750274 - 750286 + G 74 -5.5 -4.90381 | overlap 750271 TGGTATTTTTACCAG CGTAG TTG CTGCG TTTTATTATCTTAAA nuoN1 749054 - 750430 + | NADH dehydrogenase subunit N RC0797 751958 - 750417 - | hypothetical protein TERM 650 750853 - 750863 + g 70 -4 -4.95806 | GTAGTAATTTTATTT CTTA ATT TAAG TTTTTGTCCTCCTTT hemB 753048 - 752047 - | delta-aminolevulinic acid dehydratase RC0799 753253 - 754143 + | hypothetical protein priA 756175 - 754229 - | primosome assembly protein PriA TERM 651 755181 - 755195 + g 72 -8.6 -3.07816 | AAATTACCTTTGATA GCTTCT ATA AGAAGC TTGGATAAATAGGAA TERM 652 756682 - 756696 + G 83 -7 -4.91109 | CGGCGGCATTATATC GCCGCC CGT GCCGGC TTTTTATAATAACCC ubiX 756239 - 756814 + | aromatic acid decarboxylase RC0802 757211 - 756906 - | hypothetical protein TERM 653 757055 - 757041 - Gf 70 -4.3 -4.77157 | opp_overlap 757041 GCAATCCAGTAAAAA TTCTG ATTTA CAGAA TTTTTTTACCACCAC TERM 654 757041 - 757055 + gF 81 -4.3 -5.40072 | opp_overlap 757041 GCAATCCAGTAAAAA TTCTG ATTTA CAGAA TTTTTTTACCACCAC dnaB 757181 - 758665 + | replicative DNA helicase TERM 655 758777 - 758722 - gT 70 -8.4 -3.06183 | gap 1, opp_overlap 758727 758736 GTCATTGCGAGCGAA CGTTAGTGAGCGTGGCAATCTCAGGAA TTT TTCCTGAGATTGCTTCG-TCAGTTACT TCGTACCTTCCTCGC TERM 656 758727 - 758772 + GT 100 -13.5 -3.41581 | gap 1, opp_overlap 758722, overlap 758736 TGCGAGCGAACGTTA GTGAGCGTGGCAATCTCAGGAA TTT TTCCTGAGATTGCTTCG-TCAG TTACTTCGTACCTTC TERM 657 758736 - 758764 + GT 100 -19.1 -3.23598 | opp_overlap 758722, overlap 758727 ACGTTAGTGAGCGTG GCAATCTCAGGAA TTT TTCCTGAGATTGC TTCGTCAGTTACTTC TERM 658 758796 - 758808 + GT 72 -2.7 -5.45813 | TACCTTCCTCGCAAT GATGA TGT TTATC TTTTATTTTTTCCTG RC0804 758559 - 758870 + | hypothetical protein RC0805 759067 - 758825 - | hypothetical protein RC0806 759395 - 759198 - | hypothetical protein TERM 659 760300 - 760328 + H 74 -7.8 -3.81256 | opp_overlap 760294 760300 760302 760306, overlap 760287 GGTATAGTATAATTA TATTAATAATTT ATGTA AAATTATTAATA TTGCTTTTTAAGGGT rluB 760530 - 761222 + | ribosomal large subunit pseudouridine synthase B TERM 660 762272 - 762261 - g 81 -3 -5.75822 | opp_overlap 762261 TAGAAAGCAAAAAAA TCTT TCAG AAGA TTTAAATATAGTTCC TERM 661 762465 - 762451 - g 72 -8.6 -3.04398 | overlap 762450 GCCGTTTTTCAAAAT GTTACG GCT CGTAAC GCAGGATTTCTTTTT TERM 662 764088 - 764074 - g 79 -8.6 -3.9344 | overlap 764083 AAGCCTAACACTAAA GGCAAA GGA TTTGCC ACAAAAATAAAAGAC RC0808 761269 - 764142 + | hypothetical protein RC0809 764147 - 764884 + | hypothetical protein TERM 663 764896 - 764915 + F 86 -5.2 -5.62288 | opp_overlap 764896 764891 GTAACACATATAAAA TATAAAAA CTTG TTTTTATA TTTTTATTTTATTAA TERM 664 764915 - 764896 - f 70 -5.2 -4.68124 | opp_overlap 764896, overlap 764891 GTAACACATATAAAA TATAAAAA CTTG TTTTTATA TTTTTATTTTATTAA TERM 665 766236 - 766225 - g 76 -3.6 -5.38549 | GTGAAATAAGAAAAA CCGC AAAA GCAG AAACAAGAATAAAAG radA 765030 - 766364 + | DNA repair protein RadA RC0811 766361 - 766675 + | hypothetical protein TERM 666 766725 - 766711 - f 95 -7.2 -5.73672 | opp_overlap 766711 766712 AAATAATTAAAAAAA TGCTAA AAA TTAGCA TTTTTAACTGGATTG TERM 667 766711 - 766725 + F 81 -7.2 -4.68424 | opp_overlap 766711, overlap 766712 AAATAATTAAAAAAA TGCTAA AAA TTAGCA TTTTTAACTGGATTG recO 766797 - 767510 + | DNA repair protein RecO TERM 668 767579 - 767550 - f 78 -10.3 -2.79796 | opp_overlap 767550 767552 767553, overlap 767552 TCTTATTTTATGATA TACTTACTTAAGT AATT ACTTAAATAAGTA TGTAATATGACTAGA TERM 669 767725 - 767715 - g 74 -5.4 -4.83269 | ATAGCACAGGAAAAA GCAT TAA ATGC AGAATCAATAAAAAT RC0813 767586 - 767822 + | hypothetical protein RC0814 767958 - 768656 + | hypothetical protein RC0815 769969 - 768707 - | hypothetical protein infB 772827 - 770332 - | translation initiation factor IF-2 TERM 670 770454 - 770471 + g 72 -5.7 -4.4518 | CTTCTTTAACTTCAT CTTTAAA GCGT TTTAAAG TTTTGAGTTTTCCTT TERM 671 771943 - 771955 + g 77 -9.1 -3.35723 | overlap 771941 TGTTGCAACTAGTTC TGCCG TAT CGGCA TCTATTGTTTGGCTA TERM 672 772332 - 772350 + g 78 -6.8 -4.52502 | opp_overlap 772332 772336, overlap 772319 772329 772336 GCTTTCCTACTAAAG GAGACTTT ACA AAAGTTTC TTCTTTCTTTTTAGG TERM 673 772677 - 772663 - G 71 -8.6 -2.95652 | overlap 772662 TTTATTTAATGAAAG GGTAGT AGC ACTACC GGTAGAACTTTTTCT nusA 774578 - 773067 - | transcription elongation factor NusA TERM 674 774592 - 774603 + r 72 -4.4 -5.12617 | ATACATTATCTCTTA TTGC TTTA GCAA TTTTTTAAATACTTC RC0818 775074 - 774589 - | hypothetical protein TERM 675 775113 - 775097 - R 100 -9.4 -5.56673 | opp_overlap 775097 775095 775093 ATTTATAACAAAAAA GGTGGG ATAAA CCCACC TATCTATAATTTTTA TERM 676 775097 - 775113 + r 76 -9.4 -3.12138 | opp_overlap 775097, overlap 775095 775093 ATTTATAACAAAAAA GGTGGG ATAAA CCCACC TATCTATAATTTTTA RC0819 775604 - 775290 - | hypothetical protein RC0820 776459 - 776301 - | hypothetical protein TERM 677 776835 - 776825 - g 74 -4 -5.1764 | GATATAATAGAAAAA TTAG AAC CTAA TATGGATATAGTAGA RC0821 776582 - 777010 + | hypothetical protein tlyA 777760 - 777005 - | hemolysin TERM 678 777864 - 777814 - R 70 -5 -4.62984 | opp_overlap 777816 777819 777821 777823, overlap 777816 777821 CCATTAGATAGAAAA TATACAATTTGTCTAATTGAAAGT TAC AGTTTCAATTAGACATAATATATT TGAGCCATACAATAA TERM 679 777862 - 777816 - R 76 -7.6 -3.92276 | opp_overlap 777816 777819 777821 777823, overlap 777814 777821 ATTAGATAGAAAATA TACAATTTGTCTAATTGAAAGT TAC AGTTTCAATTAGACATAATATA TTTGAGCCATACAAT TERM 680 777857 - 777821 - R 90 -9.7 -3.87562 | opp_overlap 777821 777819 777816 777823, overlap 777816 777814 ATAGAAAATATACAA TTTGTCTAATTGAAAGT TAC AGTTTCAATTAGACATA ATATATTTGAGCCAT TERM 681 777821 - 777858 + r 72 -8.1 -3.24708 | gap 1, opp_overlap 777816 777814 777821, overlap 777819 777816 777823 ATAGAAAATATACAA TT-TGTCTAATTGAAAGT TAC AGTTTCAATTAGACATAA TATATTTGAGCCATA TERM 682 777823 - 777855 + r 100 -12.3 -2.80821 | opp_overlap 777821 777816 777814, overlap 777821 777819 777816 AGAAAATATACAATT TGTCTAATTGAAAGT TAC AGTTTCAATTAGACA TAATATATTTGAGCC tyrS 779154 - 777919 - | tyrosyl-tRNA synthetase RC0824 779439 - 779158 - | hypothetical protein RC0825 779697 - 779452 - | hypothetical protein RC0826 779765 - 780058 + | hypothetical protein TERM 683 780193 - 780211 + F 81 -9.6 -3.54129 | opp_overlap 780192 780193 780208 ATGAATCAGTAAAAT CCACTGTG TCA TACAGTGG TTTGACCACGGTATC TERM 684 780211 - 780193 - f 73 -8.9 -3.21124 | opp_overlap 780193, overlap 780192 780208 ATGAATCAGTAAAAT CCACTGT GTCAT ACAGTGG TTTGACCACGGTATC RC0827 781842 - 782156 + | hypothetical protein RC0828 782309 - 782127 - | hypothetical protein RC0829 783116 - 782769 - | hypothetical protein RC0830 784464 - 783913 - | hypothetical protein RC0831 784727 - 784452 - | hypothetical protein RC0832 784915 - 784688 - | putative proline/betaine transporter RC0833 785440 - 785240 - | hypothetical protein RC0834 785676 - 785452 - | hypothetical protein TERM 685 787547 - 787535 - g 74 -5.5 -4.8048 | GTTGTATAGTAAAAA CCGAT AAA ACCGG GACGCATCATATCTT TERM 686 788057 - 788073 + G 77 -8.1 -3.86252 | ATGATGCCTTAACCG GCTTATA CAA TATAAGC TTATATTTAGTAGGA RC0835 785896 - 791574 + | hypothetical protein RC0836 792106 - 791768 - | putative 3-hydroxyacyl-CoA dehydrogenase (FadB) RC0837 792332 - 792171 - | putative 3-hydroxyacyl-CoA dehydrogenase (FadB) RC0838 792582 - 792286 - | putative 3-hydroxyacyl-CoA dehydrogenase (FadB) RC0839 792826 - 792614 - | putative 3-hydroxyacyl-CoA dehydrogenase (FadB) RC0840 793095 - 792937 - | putative 3-hydroxyacyl-CoA dehydrogenase (FadB) RC0841 793585 - 793100 - | putative 3-hydroxyacyl-CoA dehydrogenase (FadB) RC0842 793934 - 793470 - | putative 3-hydroxyacyl-CoA dehydrogenase (FadB) RC0843 794386 - 794021 - | putative competence protein F RC0844 794726 - 794379 - | putative competence protein F RC0845 795237 - 794959 - | hypothetical protein RC0846 795611 - 795261 - | hypothetical protein RC0847 795964 - 795722 - | hypothetical protein ubiH 797437 - 796142 - | 2-octaprenyl-6-methoxyphenyl hydroxylase ntrX 798209 - 799633 + | nitrogen assimilation regulatory protein ntrX RC0850 799602 - 801371 + | hypothetical protein TERM 687 801510 - 801489 - T 77 -7.5 -4.30978 | opp_overlap 801489 801488 801485 GGGAATCCAGTAAAA CATATAAAA AATT TTTTATATG CTTATTTTGTTAAAG RC0851 802554 - 801595 - | hypothetical protein TERM 688 802828 - 802864 + r 76 -6.9 -4.42386 | opp_overlap 802838, overlap 802832 CTTGATCACGGGGTC TAATTAAAAATACTAAT AAT ATTAGTATTTTAAGTTG TTTTCTGGATACCAC TERM 689 802854 - 802838 - R 82 -6.7 -4.8622 | opp_overlap 802832 802828 GGGTCTAATTAAAAA TACTAAT AAT ATTAGTA TTTTAAGTTGTTTTC pbpA1 805010 - 803229 - | penicillin-binding protein TERM 690 804308 - 804325 + g 70 -6.3 -4.22009 | TATCTTCGCCCGATT TAGTAGG GGTT CCTGCTA TTTCTCTTACCTGCT RC0853 805521 - 805000 - | hypothetical protein RC0854 805965 - 805771 - | hypothetical protein TERM 691 806031 - 806075 + r 77 -8 -4.13014 | gap 1, overlap 806032 806034 TTTTTGTTGCACAGA TC-GTTTTATGTCATTCCCGC ATAG GCGGGGATGACATCAAGTAGG TTTTACCGATCTACG TERM 692 806032 - 806074 + r 76 -9.3 -3.07487 | gap 1, overlap 806031 806034 TTTTGTTGCACAGAT C-GTTTTATGTCATTCCCGC ATAG GCGGGGATGACATCAAGTAG GTTTTACCGATCTAC TERM 693 806034 - 806071 + r 100 -14.3 -2.75081 | overlap 806032 806031 TTGTTGCACAGATCG TTTTATGTCATTCCCGC ATAG GCGGGGATGACATCAAG TAGGTTTTACCGATC pbpA2 807825 - 806140 - | penicillin-binding protein TERM 694 807954 - 807920 - R 72 -6.7 -4.10855 | opp_overlap 807914 807920 807950, overlap 807910 807934 807950 AAAACCTTTTCAAAA CTTGATTTGAAAAAT AAAAA ATCTTTAAAATCAAG ATTTTTTGAAAAGCT RC0856 808567 - 808169 - | hypothetical protein mraW 809497 - 808574 - | S-adenosyl-methyltransferase MraW TERM 695 809352 - 809373 + g 71 -6.6 -4.08058 | GGATCACGATCCAAG GCTGTGAC ATAACA GTTACAGC TTTCTAATATTGCTT RC0858 809946 - 809497 - | cell division protein MraZ TERM 696 810107 - 810080 - H 75 -5.8 -4.8236 | opp_overlap 810079 810087, overlap 810082 TATCCAAAAAAATAA TTTAAAATACTA ATAT TAGTATTTTAGA ATGGATTCCGCGATC RC0859 810360 - 810689 + | hypothetical protein RC0860 810640 - 810879 + | ankyrin like protein TERM 697 810869 - 810857 - f 72 -4.9 -4.99035 | TCATCGAGATAAAAA CTAAT AGA ATTAG TACCCGATGATAAAC RC0861 811252 - 811506 + | hypothetical protein panF 811530 - 812924 + | sodium/pantothenate symporter RC0863 813151 - 813366 + | hypothetical protein uvrC 815473 - 813554 - | excinuclease ABC subunit C TERM 698 813644 - 813682 + g 76 -3.3 -5.49809 | gap 2, opp_overlap 813663 813664, overlap 813647 813663 ATATATGGTTGCGTC GCA-TACTGCTTTA-TACG AAC CGAAATAATGCAGTAATGC TTTTTTTCGAGTTTC TERM 699 815173 - 815163 - G 71 -5.4 -4.62054 | TTAATGAAAGGAAAA GACT TGC AGTC CTTAAGAAGAATATT TERM 700 815421 - 815404 - G 74 -7.7 -3.93673 | CAAACATTCGATAAA CCCCTGA ACGT TCAGGAG CATCTATAAGTTTAG RC0865 816178 - 815648 - | hypothetical protein TERM 701 815847 - 815837 - G 74 -5.4 -4.86621 | opp_overlap 815837 ACCGGCAATTAAAAA TGGA TAA TCCA CTTTTACCATTTTAC RC0866 816759 - 816340 - | hypothetical protein RC0867 817082 - 816906 - | putative methylated-DNA--protein-cysteine methyltransferase RC0868 817822 - 817241 - | putative methylated-DNA--protein-cysteine methyltransferase RC0869 817961 - 817728 - | putative methylated-DNA--protein-cysteine methyltransferase TERM 702 817903 - 817890 - GR 74 -3.9 -5.25803 | opp_overlap 817890 AACCGCTACAAAAAA GATAT TTTC ATATC TGTCATCTTTATTAA dat 818552 - 818046 - | methylated-DNA--protein-cysteine methyltransferase TERM 703 818576 - 818593 + r 74 -2.1 -5.63517 | CCTAAATATGATTTC TTAATAT TATA ATATTGA TTTTTTATTTAACAA TERM 704 819593 - 819621 + r 71 -4.6 -4.74504 | gap 1, overlap 819597 819598 AAGCTATTATTGTTT TGTTAGTGCCGAG TTCA CTTGGCAC-ATCA TTTTTAAATTCAGCT TERM 705 819598 - 819617 + r 76 -10 -2.56432 | overlap 819597 819593 ATTATTGTTTTGTTA GTGCCGAG TTCA CTTGGCAC ATCATTTTTAAATTC RC0871 819921 - 819706 - | hypothetical protein RC0872 820163 - 819945 - | hypothetical protein RC0873 820862 - 820368 - | putative type I restriction enzyme restriction subunit RC0874 821186 - 820908 - | hypothetical protein RC0875 821720 - 821529 - | hypothetical protein RC0876 822499 - 822290 - | hypothetical protein RC0877 823058 - 822816 - | hypothetical protein TERM 706 823601 - 823628 + r 78 -9.2 -3.23869 | gap 1, overlap 823599 ATACCCAAATCGTCA TTGCGA-GCAGCC GTA GGCTGCGTGGCAA TCTTATGAAATAATA RC0878 824153 - 823947 - | hypothetical protein secA 826874 - 824154 - | preprotein translocase subunit SecA TERM 707 827173 - 827161 - g 74 -7.7 -3.89695 | TGCTGATAAAGACAA GGTAG TTG CTACC TATAAAGGCGGTGAA prsA 827090 - 827938 + | protein export protein prsA precursor acpS 828543 - 828148 - | 4'-phosphopantetheinyl transferase rpoZ 828927 - 828544 - | DNA-directed RNA polymerase subunit omega murA 830364 - 829105 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 708 830413 - 830449 + r 82 -10.9 -2.64416 | opp_overlap 830415 830416, overlap 830412 AGGAGAAACTGATTA AATTGTCATACCGTGGT CAA GCCACGGTATGACAGCG ATTATACTACACATC TERM 709 830447 - 830415 - R 100 -15 -3.83169 | opp_overlap 830413 830412, overlap 830416 GAGAAACTGATTAAA TTGTCATACCGTGG TCAAG CCACGGTATGACAG CGATTATACTACACA TERM 710 830446 - 830416 - R 100 -18.5 -2.89178 | opp_overlap 830413 830412, overlap 830415 AGAAACTGATTAAAT TGTCATACCGTGG TCAAG CCACGGTATGACA GCGATTATACTACAC gyrB 832879 - 830456 - | DNA gyrase subunit B TERM 711 831914 - 831931 + g 82 -4.9 -5.4505 | CCTAGTATCTTCACC GCTAAAG TAAT TTTTAGC TTTTTTATTAAGACC TERM 712 832645 - 832658 + g 93 -6.7 -5.37171 | overlap 832632 GCCCGTTATCGGATA CGGTT ACTG AACCG TTTTTATTTAATGTT RC0885 833075 - 834019 + | hypothetical protein TERM 713 835312 - 835288 - g 89 -11.7 -3.16881 | opp_overlap 835295, overlap 835295 TAGGTAGCGTATCAA TCGATAATATA ATT TATATTATCGA AGAACAAGCCGGCAA TERM 714 835638 - 835624 - g 74 -5.6 -4.75288 | opp_overlap 835626, overlap 835626 TTATATTAAAAGAAA TAGCCG TAT CGGCTT TTAACGGTTTTGTAC TERM 715 835626 - 835636 + G 83 -8.2 -4.19879 | opp_overlap 835626 835624 ATATTAAAAGAAATA GCCG TAT CGGC TTTTAACGGTTTTGT TERM 716 835636 - 835626 - g 79 -8.2 -3.98052 | opp_overlap 835626, overlap 835624 ATATTAAAAGAAATA GCCG TAT CGGC TTTTAACGGTTTTGT mgtE 834525 - 835895 + | magnesium transporter RC0887 836075 - 835899 - | hypothetical protein TERM 717 836522 - 836536 + H 75 -4.2 -5.30155 | overlap 836523 AATTATCAACTTTTT CTAGGC AAT GCCTAA TTTTTTAATTAATAG TERM 718 836523 - 836535 + H 74 -7.7 -3.77008 | overlap 836522 ATTATCAACTTTTTC TAGGC AAT GCCTA ATTTTTTAATTAATA TERM 719 837108 - 837140 + G 87 -8.7 -4.28994 | opp_overlap 837108 837114, overlap 837113 CACCTGAGAAAGCTA GAAAAATTATTGAAG CGA CTTTAATAAATTTTC TTTTGGTCGCTGCTA TERM 720 837134 - 837114 - g 70 -4.1 -4.95896 | opp_overlap 837113 837108, overlap 837108 AGAAAGCTAGAAAAA TTATTGAAG CGA CTTTAATAA ATTTTCTTTTGGTCG RC0888 836744 - 837196 + | putative (p)ppGpp 3-pyrophosphohydrolase RC0889 837577 - 837236 - | putative proline/betaine transporter RC0890 838411 - 837899 - | putative proline/betaine transporter TERM 721 839032 - 839073 + r 79 -8.1 -3.91506 | overlap 839031 839033 TCCAGTGATTTTGTC CGTTTTATGTCATTCCCGC CTAC GCAGGAATGATATAGAGCA TGTTTTTCGAGCTAA TERM 722 839033 - 839072 + r 87 -11.6 -2.94422 | overlap 839032 839031 CCAGTGATTTTGTCC GTTTTATGTCATTCCCGC CTAC GCAGGAATGATATAGAGC ATGTTTTTCGAGCTA RC0891 839318 - 839160 - | hypothetical protein RC0892 839526 - 839765 + | hypothetical protein TERM 723 839828 - 839846 + GF 72 -4.6 -4.91573 | overlap 839813 839810 TCGGGGTTAACAAGC TTAATACC GAT GGTTTTAA TTTTTGCTGTATTTT yajC 839717 - 840142 + | preprotein translocase subunit YajC secD 840126 - 841682 + | preprotein translocase subunit SecD TERM 724 842250 - 842240 - g 70 -4 -4.93454 | TAAATAAACATAAAA TAGA TAT TCTA CCTGTTTTTATCACT sco2 841927 - 842544 + | sco2 protein precursor ccmE 842646 - 843032 + | cytochrome c-type biogenesis protein CcmE TERM 725 843051 - 843019 - f 77 -9.9 -2.9834 | ATGATGAGAATTACA GGCCTCCGCAATAAC AAC GTCATTGCGAAGAGC GAAGCGACGTGGCAA ppa 843158 - 843679 + | inorganic pyrophosphatase TERM 726 843829 - 843799 - f 70 -4.3 -4.91657 | gap 1, opp_overlap 843799 843803 AATTAACAAAATAAA CCTATAAA-AACAA GTTT TTATTTTTTATAGG TTTTTCCCGCCTCCG TERM 727 843803 - 843818 + F 74 -3.4 -5.35222 | opp_overlap 843799, overlap 843799 AACAAAATAAACCTA TAAAAA CAAG TTTTTA TTTTTTATAGGTTTT TERM 728 845333 - 845319 - g 74 -5.7 -4.66746 | TACAAAACAAAATAA GCTTC ATATA GAAGC CGGTATAAAACTTTT TERM 729 845394 - 845408 + G 74 -7.2 -4.09628 | opp_overlap 845394 845393, overlap 845399 AATGTCTATTATAAT TGCTTT AAT AAAGCA TTATTATTTAGAATA mviN 843883 - 845550 + | virulence factor mviN TERM 730 845599 - 845615 + G 74 -9.5 -2.75389 | opp_overlap 845583 845597 CTTAGCTATTATAGC CATGATC ATT GATCATG TAGGTTTATATCTAT TERM 731 846004 - 846020 + G 80 -5.9 -5.04356 | opp_overlap 846004, overlap 845990 846017 GGCAAACTTAAAACT TTGCTGT TTT ATAGCAA TTTTTGCTTCTTTCA RC0899 845531 - 846283 + | hypothetical protein RC0900 846342 - 846959 + | hypothetical protein recG 849308 - 847167 - | ATP-dependent DNA helicase RecG RC0902 850153 - 849581 - | hypothetical protein TERM 732 849734 - 849720 - G 70 -4.3 -4.92757 | TTATCAACAACAAAA TGGTT AACTA AACCA CGCTCTAAACCGTAT RC0903 850530 - 850222 - | hypothetical protein RC0904 850724 - 850951 + | putative succinyl-CoA:3-ketoacid-coenzyme A transferase TERM 733 851198 - 851178 - g 72 -4.7 -4.79352 | TGATTTATAATAAAA CTGCACGAA ATT TTAATGCAG TCATGGCAGGTGCCG RC0905 851003 - 851365 + | putative succinyl-CoA:3-ketoacid-coenzyme A transferase scoB 851369 - 852016 + | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B RC0907 852208 - 852381 + | putative tryptophan repressor binding protein RC0908 852366 - 852593 + | putative tryptophan repressor binding protein TERM 734 852611 - 852637 + T 100 -19.6 -4.38927 | opp_overlap 852636 TTATATGGTGTTTTA TGTCATTCCCGC AAA GCGGGAATGACA TTTATTATCTAACAA RC0909 854204 - 852642 - | putative WASP, N-WASP, MENA proteins mraY 855399 - 854314 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 856943 - 855594 - | UDP-N-acetylmuramoylalanyl-D-glutamyl- 2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 735 857045 - 857010 - R 82 -10.8 -2.52896 | opp_overlap 857011 857015, overlap 857015 GTAGGCGGGAAGGCA GTAAACATATAAAAAG CTTG CTTTTTATATGTTTAT TTTATCAAATATGTA TERM 736 857011 - 857044 + r 100 -14.3 -4.4195 | opp_overlap 857010 857015, overlap 857015 TAGGCGGGAAGGCAG TAAACATATAAAAAG CTTG CTTTTTATATGTTTA TTTTATCAAATATGT TERM 737 857015 - 857040 + r 100 -10.7 -4.77775 | opp_overlap 857015 857010, overlap 857011 CGGGAAGGCAGTAAA CATATAAAAAG CTTG CTTTTTATATG TTTATTTTATCAAAT TERM 738 857040 - 857015 - R 91 -10.7 -3.794 | opp_overlap 857011 857015, overlap 857010 CGGGAAGGCAGTAAA CATATAAAAAG CTTG CTTTTTATATG TTTATTTTATCAAAT murE 858590 - 857151 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 739 858711 - 858684 - R 74 -9.2 -2.80113 | gap 1, overlap 858651 TATTATTTCATGAGA TTGCCACGCAGCC TAC GGCTGC-TTGCAA TGACAGAGCAGGAAT mfd 862105 - 858737 - | transcription-repair coupling factor TERM 740 860199 - 860182 - G 80 -7.1 -4.57353 | GTTGACTACATAAAA TAGTTGT CGGT ACAACTA CGGCTACTTGAGGTA RC0914 862380 - 862117 - | hypothetical protein TERM 741 862346 - 862360 + g 76 -3.6 -5.41941 | overlap 862347 CTACGGTAAAAAAGT TTCTTT TGT AAAGAG TTTTTATTTAATTTA RC0915 862542 - 862913 + | hypothetical protein TERM 742 863681 - 863697 + G 72 -5.9 -4.35885 | opp_overlap 863681 TACATTGATTGATAA TAACCGT CAA ATGGTTA TTTCTTGTGATAGAT dnaA 862914 - 864305 + | chromosomal replication initiation protein RC0917 865246 - 865004 - | hypothetical protein RC0918 865599 - 865285 - | hypothetical protein RC0919 866028 - 865612 - | hypothetical protein TERM 743 865849 - 865884 + g 82 -10.2 -3.29511 | gap 1, opp_overlap 865848 865847 CATAGGAAAAAACTC CTTATATGATAAAAATA TAC TATTTTTATCA-ATAAG TTCTAAAAACATAGG TERM 744 866309 - 866328 + r 70 -3.6 -5.17576 | GTCCTTTAGAATTAT GTATGGGT TATT ACTTATAC TTTTTTAAGTTGATA RC0920 866806 - 866480 - | hypothetical protein RC0921 867100 - 866948 - | hypothetical protein pat1 867354 - 868826 + | patatin b1 precursor RC0923 869383 - 869015 - | putative bicyclomycin resistance protein (Bcr1) RC0924 869762 - 869442 - | putative bicyclomycin resistance protein (Bcr1) RC0925 870230 - 870036 - | putative bicyclomycin resistance protein (Bcr1) TERM 745 870206 - 870189 - G 74 -6.3 -4.48317 | overlap 870194 870200 TGATAAAATAAATAA GCATAGA AGCA TCCATGC CGGAATCTTCGCAAT RC0926 870701 - 870462 - | hypothetical protein RC0927 871114 - 870911 - | hypothetical protein gtp1 872258 - 871161 - | translation-associated GTPase TERM 746 871349 - 871336 - G 80 -9.5 -3.44284 | opp_overlap 871345 871347, overlap 871322 871321 871334 TCGGTATGAATAATA CCGGC AGCA GCCGG TGCAAGTGTGCCGTC TERM 747 871428 - 871410 - G 71 -3.2 -5.21709 | opp_overlap 871410 871411, overlap 871411 TCCTATAGTAAAAAA GCTTTTAA GGT TTAAAAGA TTATACCCCTCTTTA TERM 748 871793 - 871808 + g 70 -4.6 -4.78149 | CTGCCATGGCTTTAT CGCCTG ACTT CAAGCG TTTTTCACTTGTAGC RC0929 872425 - 872255 - | hypothetical protein RC0930 872682 - 872452 - | hypothetical protein pth 873444 - 872887 - | peptidyl-tRNA hydrolase TERM 749 873307 - 873318 + g 81 -3 -5.73978 | overlap 873303 AATAGTTTCAGCAAT TTCA CAAT TGAA TTTTTTCTTTGTACT rplY 874378 - 873767 - | 50S ribosomal protein L25/general stress protein Ctc RC0933 875801 - 875124 - | hypothetical protein rpmI 875968 - 876174 + | 50S ribosomal protein L35 rplT 876194 - 876547 + | 50S ribosomal protein L20 TERM 750 876554 - 876588 + F 100 -14.4 -4.02424 | opp_overlap 876548 876556 876587, overlap 876545 876556 CATATTTAAGTATTT AATGTCATCTCGTGGT CAA GCCACGGGATGACATA TTTATAATAATTAAT TERM 751 876556 - 876586 + F 100 -17 -3.59935 | opp_overlap 876548 876556, overlap 876554 876545 TATTTAAGTATTTAA TGTCATCTCGTGGT CAA GCCACGGGATGACA TATTTATAATAATTA TERM 752 876586 - 876556 - f 100 -14.1 -3.1364 | opp_overlap 876556 876554 876545, overlap 876548 TATTTAAGTATTTAA TGTCATCTCGTGG TCAAG CCACGGGATGACA TATTTATAATAATTA rpmH 876630 - 876764 + | 50S ribosomal protein L34 rnpA 876784 - 877140 + | ribonuclease P TERM 753 877385 - 877397 + T 74 -3.4 -5.38348 | opp_overlap 877385 AATCCAGTACAAAAT TCTG ATGTA CAGA TTTTTTACTATTTTT TERM 754 877456 - 877501 + T 100 -10.5 -4.57569 | overlap 877460 TGCGTTGTGGCATGG CTCGTTTTATGTCATTCCCGC GAAA GCGGGAATGACATCGAGTAGG TTTTTCAAGCCATGC TERM 755 877460 - 877497 + T 100 -14.3 -2.83903 | overlap 877456 TTGTGGCATGGCTCG TTTTATGTCATTCCCGC GAAA GCGGGAATGACATCGAG TAGGTTTTTCAAGCC RC0938 879576 - 877552 - | hypothetical protein TERM 756 879052 - 879026 - G 93 -8.2 -5.30616 | opp_overlap 879025 879026 GCACTTAAAGAAAAA CTATAAATTTGA TCG TCTAATTTATAG CTTATACTAAAATCT TERM 757 879641 - 879604 - H 78 -9.4 -3.25758 | opp_overlap 879604 ATATAATTAACTTAA TTACCATATTCTATGG GAATTA CCACATAATATGGTAA TTTTTATAAAAGTCA TERM 758 879604 - 879641 + H 82 -7.2 -4.84359 | opp_overlap 879604 ATATAATTAACTTAA TTACCATATTCTATGG GAATTA CCACATAATATGGTAA TTTTTATAAAAGTCA TERM 759 879832 - 879805 - g 100 -11.5 -5.055 | opp_overlap 879805 GTAACCGGCAAAAAA GGGATAAGATT TAAAAC AATCTTATCCC TAGTTGCGAATAAAA TERM 760 879805 - 879832 + G 86 -11.5 -2.72344 | opp_overlap 879805 GTAACCGGCAAAAAA GGGATAAGATT TAAAAC AATCTTATCCC TAGTTGCGAATAAAA RC0939 879664 - 879858 + | hypothetical protein RC0940 880233 - 879976 - | hypothetical protein RC0941 880983 - 880750 - | hypothetical protein RC0942 881488 - 881171 - | hypothetical protein corA 882665 - 881706 - | magnesium and cobalt transport protein CorA RC0944 883561 - 883352 - | hypothetical protein RC0945 883725 - 883510 - | hypothetical protein RC0946 884086 - 883919 - | hypothetical protein TERM 761 884635 - 884616 - R 85 -11.4 -2.5602 | opp_overlap 884616 884613, overlap 884612 TAAGGAGGTAATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 762 884616 - 884635 + r 73 -9.2 -2.65808 | opp_overlap 884612 884616, overlap 884613 TAAGGAGGTAATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 763 886029 - 886006 - R 70 -8.2 -3.14132 | opp_overlap 886006, overlap 886010 CCCGTCTGCCACTAA CTAACTGGAG CAAG CCCCAATTAG TCCGTTCGACTTGCA TERM 764 886073 - 886110 + r 78 -6.6 -4.55128 | gap 2, overlap 886076 886079 886084 886103 886104 CCGATAGCGTTCGTT CTGAGCCAGGATCAAACT CTCA AGTTTGATTCTG--TCAG TTTTACTTTAAAAAT TERM 765 886079 - 886106 + r 100 -12.2 -2.82666 | overlap 886076 886073 886084 886103 886104 GCGTTCGTTCTGAGC CAGGATCAAACT CTCA AGTTTGATTCTG TCAGTTTTACTTTAA TERM 766 886103 - 886132 + r 71 -6.6 -4.02542 | overlap 886079 886076 886073 886104 ACTCTCAAGTTTGAT TCTGTCAGTTTT ACTTTA AAAATTGACAGG TTTAATTATCACTTT RC0947 887012 - 886434 - | putative aminoglycoside 3'-phosphotransferase ntrY 889202 - 887403 - | nitrogen regulation protein ntrY TERM 767 888754 - 888773 + g 80 -7.8 -4.26622 | opp_overlap 888739 888749 888748 888758, overlap 888758 TCGCTTAAATCTTCA GCAACGGC TAAA GCCGTTTC TTTTAGCTGTAATTT TERM 768 888758 - 888769 + g 80 -7.2 -4.70515 | opp_overlap 888749 888748 888758, overlap 888754 TTAAATCTTCAGCAA CGGC TAAA GCCG TTTCTTTTAGCTGTA TERM 769 889513 - 889536 + r 100 -11.2 -4.3851 | opp_overlap 889513 ATGACAATAAAAAAA GCTAGAAATA TTAA TATTTCTAGC TTTATATTTAGTATG TERM 770 889536 - 889513 - R 100 -11.2 -5.89921 | opp_overlap 889513 ATGACAATAAAAAAA GCTAGAAATA TTAA TATTTCTAGC TTTATATTTAGTATG rpsU 889768 - 889568 - | 30S ribosomal protein S21 TERM 771 889972 - 889961 - g 83 -5.8 -5.24416 | GAAGCAGAAGAAAAA TGCG GTTT CGCA AAAGGCTATAGCTTA RC0950 889793 - 890458 + | hypothetical protein RC0951 890501 - 890677 + | hypothetical protein TERM 772 890895 - 890873 - f 75 -4.9 -5.16572 | overlap 890874 ACTCAATTTAAAAAA GCATGTTCT AATAA AGAACATGA TAGAACATTAGTTAA TERM 773 890894 - 890874 - f 74 -8.4 -3.68859 | overlap 890873 CTCAATTTAAAAAAG CATGTTCT AATAA AGAACATG ATAGAACATTAGTTA RC0952 891075 - 891275 + | hypothetical protein TERM 774 893632 - 893644 + G 72 -3.3 -5.15117 | GCAAACAGCTTATCA TGCAG TTT CAGCA TTTTTTGAAGTTTTG ileS 891449 - 894727 + | isoleucyl-tRNA synthetase RC0954 894815 - 895039 + | hypothetical protein RC0955 895191 - 895472 + | hypothetical protein RC0956 895599 - 895832 + | hypothetical protein TERM 775 896271 - 896295 + F 70 -8.6 -2.72661 | overlap 896273 896290 896293 CAGTTTCCTAATTGT TACCCTGTGG CTTGT CCATGGGGTA TAGTTAAAAATACTA TERM 776 896290 - 896338 + F 100 -18.7 -3.15579 | opp_overlap 896306, overlap 896273 896271 896293 896306 CTGTGGCTTGTCCAT GGGGTATAGTTAAAAATACTAAT AAT ATTAGTATTTTTAACTATACTGC TTAATCAAAACTTAC TERM 777 896293 - 896335 + F 100 -21.2 -2.78018 | opp_overlap 896306, overlap 896271 896290 896306 TGGCTTGTCCATGGG GTATAGTTAAAAATACTAAT AAT ATTAGTATTTTTAACTATAC TGCTTAATCAAAACT TERM 778 896306 - 896322 + F 80 -6.7 -4.7173 | opp_overlap 896306, overlap 896293 896290 GGGTATAGTTAAAAA TACTAAT AAT ATTAGTA TTTTTAACTATACTG TERM 779 896322 - 896306 - f 80 -6.7 -4.70659 | opp_overlap 896306 896293 896290 GGGTATAGTTAAAAA TACTAAT AAT ATTAGTA TTTTTAACTATACTG TERM 780 896402 - 896450 + F 100 -16.5 -5.24129 | opp_overlap 896403 896405 896407 896409 896420, overlap 896403 ACATTTATTAGATAC ATATATATTACCATGAAACATGA GAA TCATATTTCATGGTAATATATAC TTTTTTATAAAAAAA TERM 781 896449 - 896403 - f 100 -22.2 -3.02947 | opp_overlap 896402 896403, overlap 896405 896407 896409 896420 CATTTATTAGATACA TATATATTACCATGAAACATGA GAA TCATATTTCATGGTAATATATA CTTTTTTATAAAAAA TERM 782 896403 - 896449 + F 100 -20 -3.73995 | opp_overlap 896403 896405 896407 896409 896420, overlap 896402 CATTTATTAGATACA TATATATTACCATGAAACATGA GAA TCATATTTCATGGTAATATATA CTTTTTTATAAAAAA TERM 783 896447 - 896405 - f 100 -20.4 -3.0682 | opp_overlap 896403 896402, overlap 896403 896407 896409 896420 TTTATTAGATACATA TATATTACCATGAAACATGA GAA TCATATTTCATGGTAATATA TACTTTTTTATAAAA TERM 784 896445 - 896407 - f 100 -18.6 -3.08912 | opp_overlap 896403 896402, overlap 896405 896403 896409 896420 TATTAGATACATATA TATTACCATGAAACATGA GAA TCATATTTCATGGTAATA TATACTTTTTTATAA TERM 785 896443 - 896409 - f 100 -16.8 -3.09655 | opp_overlap 896403 896402, overlap 896407 896405 896403 896420 TTAGATACATATATA TTACCATGAAACATGA GAA TCATATTTCATGGTAA TATATACTTTTTTAT RC0957 896532 - 896759 + | hypothetical protein RC0958 897076 - 896924 - | hypothetical protein pccA 899066 - 897069 - | propionyl-CoA carboxylase alpha chain precursor TERM 786 897664 - 897653 - G 81 -4.4 -5.4433 | ATATATAAATAAAAA TAGC CGTT GCTA AAAATACGGTAGTTA TERM 787 899087 - 899111 + r 93 -11.4 -3.48593 | overlap 899089 TTTATATCCTAATGT CACCCCGTGG CTTGA CCACGGGGTC TTGTGTCACAGGCTG TERM 788 899089 - 899109 + r 100 -14 -3.31726 | overlap 899087 TATATCCTAATGTCA CCCCGTGG CTTGA CCACGGGG TCTTGTGTCACAGGC pccB 900708 - 899164 - | propionyl-CoA carboxylase beta chain precursor TERM 789 900024 - 900034 + g 71 -8.2 -3.19482 | opp_overlap 900024 900023 900021, overlap 900023 TGTTAAATGCAAGAT CGGC AAC GCCG CTTTTAGTGGTATGC RC0961 900784 - 901032 + | hypothetical protein TERM 790 901160 - 901170 + F 72 -4 -5.06052 | opp_overlap 901154, overlap 901154 TAAATCGAATTTTTA GTTT TAA AAAC TTTTATATTTTTTAA TERM 791 901716 - 901700 - g 70 -8 -3.06302 | opp_overlap 901697 ACTACTTGGAGCTAA CGGCTT TGTTG AAGCCG GAACTTTTATCGGTA TERM 792 901815 - 901830 + G 75 -4.7 -5.00884 | ACCATCGCTTTTCTT GGCTT TATTAC AAGCC TTTTTTCCCCAAAAT TERM 793 903049 - 903065 + G 70 -8.1 -3.11812 | AAATTACTATAACCG TTTTACC GCC GGTAAAA TTCGCTAATATGGAT aas 901260 - 904682 + | acylglycerophosphoethanolamine acyltransferase TERM 794 904708 - 904736 + T 100 -13.3 -3.66356 | opp_overlap 904712, overlap 904712 ACTGCAAGGAGCGTG GAAATCTCAGGAA TTG TGCCTGAGATTTC TTTAGAGTTACAAGT RC0963 904969 - 904685 - | hypothetical protein TERM 795 904712 - 904732 + g 85 -8.3 -4.46233 | opp_overlap 904712, overlap 904708 CAAGGAGCGTGGAAA TCTCAGGAA TTG TGCCTGAGA TTTCTTTAGAGTTAC TERM 796 904732 - 904712 - G 73 -8.3 -3.56568 | opp_overlap 904712 904708 CAAGGAGCGTGGAAA TCTCAGGAA TTG TGCCTGAGA TTTCTTTAGAGTTAC znuB 905727 - 904966 - | zinc/manganese ABC transporter permease protein TERM 797 905908 - 905890 - g 73 -4.6 -5.05301 | opp_overlap 905890 905892, overlap 905884 905892 AAAGAATTAGAAAAA TTTGAGAA AAT TTCTCATA ATTGGTGGAATAAGG TERM 798 905950 - 905932 - g 73 -8.2 -3.4071 | AATAAGGACGGAGAA TTCGGTAT CTT ACACCGAA TAAACCCTATTCGCC ubiG 905857 - 906726 + | 3-demethylubiquinone-9 3-methyltransferase TERM 799 906812 - 906826 + F 71 -7.2 -3.75571 | opp_overlap 906812, overlap 906810 AAAATAATAAAAAAA TGCTAA TTT TTAGCA TCTTTTACTGGATTG TERM 800 906826 - 906812 - f 95 -7.2 -6.04419 | opp_overlap 906812 906810 AAAATAATAAAAAAA TGCTAA TTT TTAGCA TCTTTTACTGGATTG TERM 801 906923 - 906906 - f 70 -8.5 -3.19442 | ATGCAACACAGCCAA CTTGATC GCGG GATCAAG TTAAACATACTAATA TERM 802 906924 - 906954 + F 100 -12.2 -4.015 | opp_overlap 906929, overlap 906925 906929 GATCGCGGGATCAAG TTAAACATACTAAT ATT ATTAGTATGTTTAG TTGTTTGCTGGATAC TERM 803 906925 - 906953 + F 100 -13.5 -3.00418 | opp_overlap 906929, overlap 906924 906929 ATCGCGGGATCAAGT TAAACATACTAAT ATT ATTAGTATGTTTA GTTGTTTGCTGGATA TERM 804 906949 - 906929 - f 86 -9.9 -3.78329 | opp_overlap 906929 906925 906924 CGGGATCAAGTTAAA CATACTAAT ATT ATTAGTATG TTTAGTTGTTTGCTG TERM 805 906929 - 906949 + F 91 -9.9 -4.16371 | opp_overlap 906929, overlap 906925 906924 CGGGATCAAGTTAAA CATACTAAT ATT ATTAGTATG TTTAGTTGTTTGCTG TERM 806 907053 - 907069 + G 93 -10.1 -4.71061 | TAATTACTAGATTTG CTCCGTC ACC GACGGGG TTTTTACATATAGGT gltX 907025 - 908566 + | glutamyl-tRNA synthetase RC0967 908563 - 909099 + | hypothetical protein TERM 807 909143 - 909085 - T 100 -24.6 -4.15508 | gap 1, opp_overlap 909065 909086 909086, overlap 909086 AAGGAAGGCCTAAAA GCTTTAAGTAGATAGTAACGCAACAAT GCTTAA ATTGTTGCGTTACTATCTACTTAAAG- CTTTTAGAACCTAAT TERM 808 909143 - 909086 - T 100 -30.6 -3.08581 | opp_overlap 909086 909086, overlap 909085 AGGAAGGCCTAAAAG CTTTAAGTAGATAGTAACGCAACAAT GCTTAA ATTGTTGCGTTACTATCTACTTAAAG CTTTTAGAACCTAAT TERM 809 909086 - 909143 + T 100 -30.6 -3.05775 | opp_overlap 909085 909086, overlap 909086 AGGAAGGCCTAAAAG CTTTAAGTAGATAGTAACGCAACAAT GCTTAA ATTGTTGCGTTACTATCTACTTAAAG CTTTTAGAACCTAAT TERM 810 909086 - 909144 + T 100 -24.6 -4.10429 | gap 1, opp_overlap 909085 909086, overlap 909086 AGGAAGGCCTAAAAG -CTTTAAGTAGATAGTAACGCAACAAT GCTTAA ATTGTTGCGTTACTATCTACTTAAAGC TTTTAGAACCTAATT TERM 811 909147 - 909157 + T 75 -4 -5.28315 | ATCTACTTAAAGCTT TTAG AAC CTAA TTTTTTAAGTTTTAT TERM 812 909477 - 909459 - T 82 -7.6 -4.43307 | opp_overlap 909458 CTGTTAACAAAATAA CTTTAATT GAT AATTAAAG AGATTTTTACAGTAA groEL 911704 - 910058 - | chaperonin GroEL TERM 813 910699 - 910718 + g 72 -5 -4.88405 | TTTTCTTATCACCGT TACCGTCA ACAA TTACGGTA TTTTCTTTAGAAATT TERM 814 911430 - 911464 + g 72 -5.8 -4.37886 | gap 1, overlap 911457 911460 CTAGCAAGTACCGTA GCTGTAGTAGTA-CC ATCACC GGCTACTTCTGCAGC TTTTGTAGCAGCTGA groES 912019 - 911732 - | co-chaperonin GroES RC0970 912537 - 912241 - | hypothetical protein TERM 815 912823 - 912846 + r 75 -4 -5.18726 | TATATTAAACATTTT TGAGAATA GGTTAAAA TATTCTCA TTTTTATTATAAAAA RC0971 913322 - 912990 - | hypothetical protein RC0972 913807 - 913319 - | hypothetical protein TERM 816 913543 - 913503 - G 83 -10.9 -2.83715 | opp_overlap 913502 913503 913505, overlap 913479 913473 913505 913516 TTGATCAGCATTATA GATCTAAAAATATTATT ATTACTA AACAATATTTTTAGATC ATTTATAGCAGTTAT TERM 817 913503 - 913543 + g 71 -8.7 -2.93715 | opp_overlap 913479 913473 913503 913505 913516, overlap 913502 913505 TTGATCAGCATTATA GATCTAAAAATATTATT ATTACTA AACAATATTTTTAGATC ATTTATAGCAGTTAT RC0973 914323 - 913931 - | hypothetical protein TERM 818 914275 - 914251 - G 74 -8.7 -3.36515 | overlap 914249 CTTTATCTTCAAATA GCTTCAATTTA TAG TAAATAGAAGC ATCCGTGCTTATGTT RC0974 914598 - 914867 + | hypothetical protein TERM 819 914966 - 914980 + T 72 -4.3 -5.0538 | opp_overlap 914966 GCAATAATAAAAAAA TGCTA TAAAT TAGCA TTTTTTGCAATGACG TERM 820 914980 - 914966 - T 89 -4.3 -5.95946 | opp_overlap 914966 GCAATAATAAAAAAA TGCTA TAAAT TAGCA TTTTTTGCAATGACG rph 915741 - 915022 - | ribonuclease PH RC0976 915997 - 915674 - | hypothetical protein grpE 915965 - 916501 + | grpE protein TERM 821 916799 - 916836 + G 71 -5.2 -4.62904 | gap 1, opp_overlap 916799 CATCAAAATTTAAAA TATCAAATAAATT-TGC ATCAA GCATAATTTATCTGATA TTTTTGAGCATATTT TERM 822 916836 - 916799 - g 79 -7.4 -4.44277 | gap 1, opp_overlap 916799 CATCAAAATTTAAAA TATCAAATAAATT-TGC ATCAA GCATAATTTATCTGATA TTTTTGAGCATATTT perM 916630 - 917700 + | putative permease PerM-like protein TERM 823 917934 - 917944 + G 86 -4 -5.86061 | AAGCAATGCCTATAT TATC AAA GATA TTTTTTTTAATGAAG RC0979 917716 - 918384 + | hypothetical protein TERM 824 919181 - 919167 - T 75 -5.7 -4.8277 | AAAGATAAAAAATAA TCCTG TATGG CAGGA AAAAGTTAATAAGAA TERM 825 919227 - 919239 + T 77 -4.9 -5.252 | opp_overlap 919227 TTTTTTAATACAAAT TTCTA TAG TAGAA TTTTTTGTAGCACTA TERM 826 920019 - 920073 + T 100 -25 -3.27667 | opp_overlap 920019 920023 920026 920039, overlap 920023 AATCAGCTTAGTGAA GAAATAATCCAGTATAAAAATACTAA ATT TTAGCATTTTTATACTGGATTATTTC TTCACTTACTTTGTA TERM 827 920073 - 920019 - T 100 -27.2 -3.07291 | opp_overlap 920019 920023, overlap 920023 920026 920039 AATCAGCTTAGTGAA GAAATAATCCAGTATAAAAATACTAA ATT TTAGCATTTTTATACTGGATTATTTC TTCACTTACTTTGTA TERM 828 920069 - 920023 - T 100 -22.2 -4.20783 | opp_overlap 920019 920023, overlap 920019 920026 920039 AGCTTAGTGAAGAAA TAATCCAGTATAAAAATACTAA ATT TTAGCATTTTTATACTGGATTA TTTCTTCACTTACTT TERM 829 920023 - 920069 + T 100 -20 -4.26953 | opp_overlap 920023 920019 920026 920039, overlap 920019 AGCTTAGTGAAGAAA TAATCCAGTATAAAAATACTAA ATT TTAGCATTTTTATACTGGATTA TTTCTTCACTTACTT TERM 830 920066 - 920026 - T 100 -19.5 -4.22554 | opp_overlap 920023 920019, overlap 920023 920019 920039 TTAGTGAAGAAATAA TCCAGTATAAAAATACTAA ATT TTAGCATTTTTATACTGGA TTATTTCTTCACTTA rpsT 920716 - 920435 - | 30S ribosomal protein S20 TERM 831 920615 - 920625 + g 70 -4 -5.08601 | TTCATGTACAACTTT CTTT ATA AAAG TTTTTATTGCACTAG rplQ 921142 - 920732 - | 50S ribosomal protein L17 rpoA 922175 - 921153 - | DNA-directed RNA polymerase subunit alpha TERM 832 921876 - 921886 + g 74 -5.4 -4.88407 | CATGATACGTTTTTC TGCA ACA TGCA TTTTTACTTCAATAC rpsK 922577 - 922194 - | 30S ribosomal protein S11 rpsM 922979 - 922602 - | 30S ribosomal protein S13 adk 923676 - 923038 - | adenylate kinase secY 924993 - 923692 - | preprotein translocase subunit SecY rplO 925458 - 924997 - | 50S ribosomal protein L15 rpmD 925663 - 925472 - | 50S ribosomal protein L30 rpsE 926217 - 925687 - | 30S ribosomal protein S5 TERM 833 926251 - 926273 + r 70 -6.2 -4.07885 | overlap 926252 TAAAATTTTATTTTC TCTCTAGCTG CAT CAGCTAGCGC TTTTACAACACCGTG TERM 834 926252 - 926272 + r 77 -9.7 -3.04517 | overlap 926251 AAAATTTTATTTTCT CTCTAGCTG CAT CAGCTAGCG CTTTTACAACACCGT rplR 926591 - 926235 - | 50S ribosomal protein L18 TERM 835 926332 - 926342 + g 75 -2.4 -5.66989 | ACGTCTTTTATCCCT GCAG AAT CAGC TTTTTTTGCTATTTC rplF 927140 - 926607 - | 50S ribosomal protein L6 rpsH 927547 - 927149 - | 30S ribosomal protein S8 rpsN 927872 - 927567 - | 30S ribosomal protein S14 rplE 928429 - 927890 - | 50S ribosomal protein L5 rplX 928758 - 928429 - | 50S ribosomal protein L24 rplN 929127 - 928759 - | 50S ribosomal protein L14 rpsQ 929450 - 929202 - | 30S ribosomal protein S17 rpmC 929652 - 929437 - | 50S ribosomal protein L29 rplP 930055 - 929645 - | 50S ribosomal protein L16 rpsC 930723 - 930070 - | 30S ribosomal protein S3 TERM 836 930434 - 930420 - G 74 -7.2 -4.08939 | opp_overlap 930420 930418 GAATATTTATATAAA CTTCTT TTA AAGAAG TCATTTTTTCGATAG rplV 931084 - 930725 - | 50S ribosomal protein L22 rpsS 931371 - 931093 - | 30S ribosomal protein S19 rplB 932217 - 931396 - | 50S ribosomal protein L2 rplW 932514 - 932218 - | 50S ribosomal protein L23 rplD 933134 - 932511 - | 50S ribosomal protein L4 rplC 933892 - 933245 - | 50S ribosomal protein L3 rpsJ 934210 - 933893 - | 30S ribosomal protein S10 TERM 837 934443 - 934406 - R 100 -16.1 -4.17657 | opp_overlap 934412, overlap 934412 TATTACATCTTAAAA TATAAATACCTATTATT AAAA AATAATAGGTATTTATA AAATCAATTAATTAT TERM 838 934437 - 934412 - R 100 -10.7 -4.45771 | opp_overlap 934412, overlap 934406 ATCTTAAAATATAAA TACCTATTATT AAAA AATAATAGGTA TTTATAAAATCAATT TERM 839 934412 - 934437 + r 95 -10.7 -3.9009 | opp_overlap 934412 934406 ATCTTAAAATATAAA TACCTATTATT AAAA AATAATAGGTA TTTATAAAATCAATT tuf 935635 - 934451 - | elongation factor Tu TERM 840 935806 - 935849 + H 87 -11.4 -3.0246 | TACACCCGCATTGTG GCACTATTAATAAAATAATT TCAA AGTTATTTTGTTAACAGTGC TATATCAATTTTATT RC1009 936211 - 936933 + | tRNA/rRNA methyltransferase RC1010 937091 - 936939 - | hypothetical protein RC1011 937044 - 937496 + | hypothetical protein TERM 841 937662 - 937652 - g 84 -5.4 -5.44119 | GCTATTTTAAAAAAA TGTG CAG CACA GGTTAATCATGAGTT fumC 937493 - 938884 + | fumarate hydratase RC1013 938981 - 939229 + | hypothetical protein RC1014 939223 - 939546 + | hypothetical protein TERM 842 939813 - 939835 + F 74 -7.2 -4.01564 | overlap 939812 TACAATAATCCATAT TTTTCATAAA AAG TTTATGGAAA TTTCTAAATCTTTTA TERM 843 940230 - 940244 + G 70 -7.1 -3.62522 | overlap 940219 GCGGTGGTACAGGTA CCGGT TCTGC ACCGG TTATTGCACGCATTG ftsZ 939890 - 941248 + | cell division protein FtsZ RC1016 941522 - 942160 + | hypothetical protein RC1017 942347 - 942553 + | putative ecotin precursor TERM 844 942703 - 942669 - T 71 -2.3 -5.4111 | opp_overlap 942679, overlap 942679 AAGAACCAGAAAAAA TAATCAAAAATTCTG TAAAT CAGAAATTTTTACTA GATTGCTTCGTCGAA TERM 845 942693 - 942679 - T 72 -4.3 -5.10004 | opp_overlap 942679, overlap 942669 AAAAATAATCAAAAA TTCTG TAAAT CAGAA ATTTTTACTAGATTG RC1018 943343 - 942771 - | hypothetical protein ampG2 944755 - 943691 - | ampG protein rhlE 946355 - 945111 - | ATP-dependent RNA helicase RhlE TERM 846 945660 - 945677 + g 72 -2.8 -5.38054 | CCTATTACCAAGTTG TTTAGT TAATGC ACTAAA TTTTTCTTTATCAGA TERM 847 946246 - 946263 + g 74 -5.5 -4.80455 | TCCGATCCCGCCATT GCAACCG GAAT CGATTGC TTTTGTATTTCAGTC TERM 848 946696 - 946711 + r 80 -9 -3.73953 | opp_overlap 946692 ATATTATTAGATTTA GGGCAT TTTC ATGCCC TTTAGTAAAAATAAT TERM 849 946786 - 946768 - R 75 -4.7 -5.16133 | ATTATAAGACAAAAA CAAAATA TTTAC TATTTTG ATAAAGATGACTAGG cspA 947064 - 946852 - | cold shock-like protein ksgA 949394 - 948447 - | dimethyladenosine transferase TERM 850 949392 - 949415 + g 91 -8.4 -4.96501 | opp_overlap 949392, overlap 949412 GGGAATCCAGTAAAA CATATAAAAA CTTG TTTTTATATG TTTGTTTTTATCAAA TERM 851 949415 - 949392 - G 83 -8.4 -4.30978 | opp_overlap 949392 949412 GGGAATCCAGTAAAA CATATAAAAA CTTG TTTTTATATG TTTGTTTTTATCAAA RC1023 950393 - 949506 - | hypothetical protein TERM 852 950197 - 950211 + g 71 -8.6 -2.94293 | overlap 950195 950192 ATTAAGCTCTTAAGT GCTAAG TCA CTTAGC TGCTTATCTTGAGCA ostA 952679 - 950538 - | organic solvent tolerance protein TERM 853 951899 - 951883 - GH 100 -9.5 -4.36914 | opp_overlap 951881 TCTTTTTCTAGAAAA TACGGTA ATT TACCGTA ACTAACTTGAAAATT TERM 854 952728 - 952713 - gH 79 -4.8 -5.27779 | TTTAATAGTAAAAAA TAATAG CAAG CTATTA GCAATATATCAAATA RC1025 952645 - 952854 + | hypothetical protein TERM 855 953814 - 953800 - g 77 -4.4 -5.16237 | AATCTTATGAAAAAA TATTAT TGA ATAATA CTAGCCGGTTAATTA TERM 856 953995 - 953982 - g 70 -3.9 -4.93454 | overlap 953971 GAAACAAAGATAAAA TCTTT TTCT AAAGA AAGAGTTAACCCTGC xseA 952908 - 954281 + | exodeoxyribonuclease VII large subunit RC1027 954287 - 954604 + | hypothetical protein TERM 857 955075 - 955064 - g 80 -5.8 -5.09762 | TTGCAAGAAATAAAA TGCG AAAC CGCA AAATTTCCTTTTGAT xthA2 954956 - 955738 + | exodeoxyribonuclease III TERM 858 955993 - 955970 - g 75 -8.2 -3.57901 | opp_overlap 955970 955976, overlap 955968 955973 TTTACGAAAAATATA TGACGATTGT CGGT ACAATCGGCA ATTTTATGTTCTATG TERM 859 955970 - 955993 + G 73 -8.2 -3.45093 | opp_overlap 955970 955968 955973, overlap 955976 TTTACGAAAAATATA TGACGATTGT CGGT ACAATCGGCA ATTTTATGTTCTATG TERM 860 955990 - 955973 - g 71 -8.5 -2.90234 | opp_overlap 955970 955976, overlap 955970 955968 ACGAAAAATATATGA CGATTGT CGGT ACAATCG GCAATTTTATGTTCT TERM 861 955976 - 955994 + G 78 -6 -4.77867 | opp_overlap 955973 955970 955968, overlap 955970 AAAAATATATGACGA TTGTCGGT ACA ATCGGCAA TTTTATGTTCTATGT RC1029 955933 - 956199 + | hypothetical protein TERM 862 956506 - 956516 + G 71 -5.4 -4.63932 | opp_overlap 956506, overlap 956502 TTACCTGATGATAAG CTAC TTA GTAG TTTTGTTAGAAAATA engA 956203 - 957546 + | GTP-binding protein EngA RC1031 958839 - 957697 - | hypothetical protein TERM 863 958253 - 958234 - G 70 -7.2 -3.75766 | GCTATAATTTAATAA TTGCCCAT GATT ATGAGCAA GCATCATCCATAACT TERM 864 959122 - 959134 + r 70 -5.5 -4.28747 | overlap 959119 ATACCTTACTTGTAT GCGGT CCT ACTGC TTATTTATCTTTACT RC1032 960071 - 959772 - | hypothetical protein RC1033 960544 - 960296 - | hypothetical protein RC1034 960774 - 960451 - | hypothetical protein RC1035 961498 - 961259 - | hypothetical protein RC1036 962931 - 961495 - | ubiquinone biosynthesis protein TERM 865 962133 - 962151 + g 91 -11.8 -3.50905 | opp_overlap 962121, overlap 962132 ATATAGAAGTGCCGT CTAACCAC TCG GTGGTTAG TATATTTTCTGATGT TERM 866 962531 - 962545 + g 70 -4.2 -5.00851 | opp_overlap 962533, overlap 962516 962540 TGGCTCACAGTCATA GACTGC GTG GCAATC TTTTGTTTGCTTGCT ubiE 963825 - 963079 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 867 963587 - 963603 + g 71 -6.6 -4.09243 | TTATTAACTCTATCT CTTGCT TTTTT AGCAAG TTTTAAAGCAATATC mutM 963854 - 964675 + | formamidopyrimidine-DNA glycosidase TERM 868 964942 - 964927 - gf 74 -5.4 -4.8667 | overlap 964929 TACAGCGTATAAAAA TACCTG AGCA CAGGCA AATCCTGAAAAGGAG RC1039 964749 - 965378 + | putative mannose-1-phosphate guanylyltransferase RC1040 965351 - 965878 + | putative mannose-1-phosphate guanylyltransferase RC1041 966547 - 966807 + | hypothetical protein TERM 869 966974 - 966948 - T 71 -6.7 -3.96386 | opp_overlap 966954, overlap 966954 966964 CCAGAAAAAATAACA CAAAAATGCTG TAAAT CAGCATTTTTT ACTGCATTGCTACGT TERM 870 966954 - 966968 + T 81 -5.7 -5.18357 | opp_overlap 966948 966954 966964 AAAATAACACAAAAA TGCTG TAAAT CAGCA TTTTTTACTGCATTG TERM 871 966968 - 966954 - T 81 -5.7 -5.25799 | opp_overlap 966954, overlap 966948 966964 AAAATAACACAAAAA TGCTG TAAAT CAGCA TTTTTTACTGCATTG RC1042 967269 - 967066 - | hypothetical protein RC1043 967974 - 967381 - | hypothetical protein TERM 872 968212 - 968222 + r 70 -4 -4.88067 | CTCATGTTAATATGC TTCT TTT AGAA TTTTTATACCTAAAT RC1044 968601 - 968446 - | hypothetical protein RC1045 970381 - 969461 - | hypothetical protein TERM 873 970391 - 970442 + r 75 -7.4 -4.14874 | gap 1, opp_overlap 970386 970388, overlap 970398 TAACATATTATACTC TTAGTA-GGTGTGTCATACTGCGGT CTC GCCACGGTATGACACACTATTCAAA TTTTGGAAATATTAT TERM 874 970398 - 970434 + r 100 -16.7 -3.15366 | opp_overlap 970388, overlap 970391 TTATACTCTTAGTAG GTGTGTCATACTGCGGT CTC GCCACGGTATGACACAC TATTCAAATTTTGGA metG 971960 - 970434 - | methionyl-tRNA synthetase tdk 972568 - 971957 - | thymidylate kinase TERM 875 972087 - 972066 - G 74 -7.5 -3.89354 | opp_overlap 972071 TCTTTAAAGCAATAA TAGATTTTT TTAT AAAAATCTA TACCTCTTATGTCAA TERM 876 974105 - 974085 - g 76 -9.8 -3.15579 | GCAACTCTTTATCAA TTGCGGTT TATAT AACCGCAA TATCGATGGTCACTT proP4 972818 - 974185 + | proline/betaine transporter TERM 877 974212 - 974188 - T 81 -8.1 -4.31379 | opp_overlap 974188 AGGAATCCAGTAAAA CATATAAAAAT TAA ATTCTTATATG TTTTTTTACTAGAAA TERM 878 974188 - 974212 + T 88 -5.9 -5.52384 | opp_overlap 974188 AGGAATCCAGTAAAA CATATAAAAAT TAA ATTCTTATATG TTTTTTTACTAGAAA ubiA 975185 - 974337 - | prenyltransferase TERM 879 975143 - 975113 - G 100 -7.6 -5.89827 | overlap 975116 AAGCAGGAAAAAAAA CCAGCAAATAAGCT ACC AGCTTATCTGCACG CATTAATTTTAAGGT TERM 880 975140 - 975116 - G 95 -12.3 -3.63095 | overlap 975113 CAGGAAAAAAAACCA GCAAATAAGCT ACC AGCTTATCTGC ACGCATTAATTTTAA RC1050 975563 - 975733 + | hypothetical protein RC1051 975687 - 975935 + | hypothetical protein RC1052 975917 - 976153 + | hypothetical protein TERM 881 976852 - 976866 + GF 72 -7.1 -3.80133 | overlap 976849 GACCTGAGTTATTAC CGGCT TGCGT AGCCG TATTTTATCACCCTG TERM 882 978031 - 978018 - gf 71 -2.3 -5.47159 | opp_overlap 978018, overlap 978019 GGTGAAGATAAAAAA GCGAG TTTA CTCGA TATTAAAGAAAAAAT valS 976191 - 978629 + | valyl-tRNA synthetase RC1054 978598 - 979350 + | hypothetical protein RC1055 979440 - 980240 + | hypothetical protein TERM 883 980256 - 980287 + T 72 -8.9 -3.04853 | opp_overlap 980259 ATGTCGAATTGGTAA TGACTATTTCGAT ATAAGC AACGAAATAGTCA TATGATTTACATTTG RC1056 980512 - 980333 - | hypothetical protein RC1057 981974 - 983272 + | hypothetical protein RC1058 983420 - 983713 + | putative alpha-(1,3)-fucosyltransferase RC1059 983691 - 984242 + | putative alpha-(1,3)-fucosyltransferase RC1060 984554 - 984871 + | putative lipopolysaccharide biosynthesis protein RC1061 985371 - 985030 - | hypothetical protein RC1062 985877 - 985434 - | hypothetical protein RC1063 986632 - 986060 - | hypothetical protein TERM 884 986497 - 986478 - G 76 -3.6 -5.38047 | TAGCGATATAAAAAA TATTCTCT CGTC AGAGGATA TGCCATAGCATCGAT TERM 885 987156 - 987170 + H 76 -2.8 -5.53436 | AAAAACAATAGTTGT GGACAT AAC ATATCC TTTTTTATCTTCTAT RC1064 987381 - 987593 + | hypothetical protein RC1065 987932 - 988234 + | hypothetical protein TERM 886 988307 - 988281 - gf 71 -6.6 -3.88703 | opp_overlap 988281, overlap 988279 TTTGATAAACAAATA GCACCTTACATA TTA TATGGAAGCTGC TTTACAGATATTATT TERM 887 988373 - 988349 - gf 78 -5.9 -4.81685 | opp_overlap 988353 988365, overlap 988353 988365 ACTAATTATCAAAAA TAAACTAAATA GGA TATGTAGTTTA CAAATTTTATTAATA RC1066 988200 - 988517 + | hypothetical protein RC1067 988569 - 988757 + | hypothetical protein clpX 990530 - 989253 - | ATP-dependent protease ATP-binding subunit TERM 888 990372 - 990384 + g 75 -4.9 -5.02606 | opp_overlap 990366, overlap 990366 AGAAGTAATTTGCTT TAAAG CAA CTTTA TTTTCTTCTTTCATA rimJ 991118 - 990567 - | ribosomal-protein-alanine acetyltransferase TERM 889 991132 - 991176 + r 100 -9.7 -4.68593 | opp_overlap 991131 991144, overlap 991134 ATATATACTAACTAT TTTGCTGTATAATATAAATAT TAC ATATTCATATTATACAGAAGA TTTTTAAATAATGAG TERM 890 991134 - 991174 + r 76 -10.1 -2.63922 | opp_overlap 991131 991144, overlap 991132 ATATACTAACTATTT TGCTGTATAATATAAATAT TAC ATATTCATATTATACAGAA GATTTTTAAATAATG exsB 991959 - 991273 - | trans-regulatory protein ExsB RC1071 992318 - 991956 - | hypothetical protein TERM 891 992279 - 992293 + gr 79 -7.2 -4.47307 | opp_overlap 992278 CTATAGTAAACCCAT CAAATG TAT CATTTG TTTTCATCTTCATTT RC1072 992454 - 992287 - | hypothetical protein TERM 892 993369 - 993381 + G 75 -4.9 -5.03747 | overlap 993352 GATGCTAATTGGCAG CATTA CAT TAATG TTTTTTGAAAGCTTT TERM 893 993777 - 993802 + G 76 -6.1 -4.63527 | TATTTATTATGCGAT TATCGCCGGAG TTAG CTGTGGCGGTA TTTTTGAGCTACTAA msbA2 992923 - 994653 + | multidrug resistance protein TERM 894 994754 - 994770 + F 76 -10.1 -2.82516 | opp_overlap 994752 994750 CTGTGACACAAGATC CCGTGGT CAA GCCACGG TATGATACTGAACGC RC1074 994956 - 995204 + | hypothetical protein TERM 895 995270 - 995252 - f 74 -6.2 -4.43307 | overlap 995266 CTGTTAACAAAATAA TTTTAATT GAT AATTAAAA AGAATTTTTAGCGAA TERM 896 995740 - 995712 - f 74 -8.9 -3.25802 | opp_overlap 995716, overlap 995716 TAGTAAATTGATGAA GCAATCTTGGGAA GAA TTCCTGAGATTGC AATGCTCACTAACGT TERM 897 995792 - 995819 + F 81 -9.2 -3.6715 | gap 1, opp_overlap 995791 995792 TATCTATGCAACAAT GCCTTGCAGGGAT GAC ATCGC-GCAAGGC TTTCGGCTTCAATAA TERM 898 995819 - 995792 - f 74 -9.2 -2.8082 | gap 1, opp_overlap 995792, overlap 995791 TATCTATGCAACAAT GCCTTGCAGGGAT GAC ATCGC-GCAAGGC TTTCGGCTTCAATAA TERM 899 996299 - 996266 - g 95 -12.5 -3.60296 | opp_overlap 996266 996266 996265 996267 CATGGGCATTTTAAA CGGCACTATTGCCCT TTCT ATGGCAATAGCACCG GTTATAGGTAGCTAC bcr2 995871 - 997046 + | bicyclomycin resistance protein TERM 900 997367 - 997379 + G 80 -7.7 -4.3467 | TGATAGTAGTCATGT CCGTT ATG AACGG TTTTCATATAGAGCT TERM 901 998169 - 998185 + G 76 -5.2 -5.03994 | opp_overlap 998165 TATGGGAGCAAGCAC TAAGCA AATAA TGCTTA TTTTTATCTATAACG RC1076 997120 - 998478 + | hypothetical protein RC1077 998471 - 999136 + | ABC transporter ATP-binding protein TERM 902 1000704 - 1000686 - g 74 -3.2 -5.40625 | AGATGATATAAAAAA TATATTGG AAG CAAATATA GATAAGAATATGTTC RC1078 999355 - 1001256 + | hypothetical protein RC1079 1001331 - 1002605 + | hemolysin-like protein ccmF 1002598 - 1004586 + | cytochrome c-type biogenesis protein ccmF RC1081 1004873 - 1004583 - | hypothetical protein RC1082 1005419 - 1005066 - | hypothetical protein RC1083 1006230 - 1005823 - | hypothetical protein RC1084 1006617 - 1006339 - | hypothetical protein TERM 903 1007145 - 1007123 - R 82 -7.1 -4.82212 | gap 1, opp_overlap 1007123 1007126, overlap 1007126 GAAAGAACAAACAAA GCACCTCTTT TTTC AAAGAGG-GC TTTTTTTCTTGAGGA TERM 904 1007123 - 1007145 + r 95 -7.1 -5.7946 | gap 1, opp_overlap 1007123 1007126, overlap 1007126 GAAAGAACAAACAAA GCACCTCTTT TTTC AAAGAGG-GC TTTTTTTCTTGAGGA TERM 905 1007143 - 1007126 - R 72 -8.5 -3.26683 | opp_overlap 1007126 1007123, overlap 1007123 AGAACAAACAAAGCA CCTCTTT TTTC AAAGAGG GCTTTTTTTCTTGAG rompB 1012155 - 1007188 - | outer membrane protein B (cell surface antigen sca5) TERM 906 1007959 - 1007991 + g 79 -7.2 -4.41302 | gap 1, opp_overlap 1007945 1007958 ACCGATTACAACACC GGTGGTTTTAGCT TTATAACC AGCTA-AACCACC TTTCTTACTTTGATG TERM 907 1011974 - 1011960 - G 74 -8.6 -3.2794 | opp_overlap 1011969 1011970 CTGCATTTAGAGGAA CTGCAA CAT TTGCAG GAACTGCAGTTTGGT TERM 908 1012022 - 1012008 - G 74 -8.6 -3.24925 | opp_overlap 1012008 1012007 1012005 1012010 ATCCCACACCATCAA CAGTTG TAG CAACTG CGTTTGTTGTTCTAT TERM 909 1012236 - 1012206 - R 72 -6.2 -4.27443 | overlap 1012203 CTAGTATTAAAACAA TCAAACGTGAGTCA AGA TATCCCACATTTGA TAAGGAAATAACCTG TERM 910 1013424 - 1013447 + r 78 -9.6 -3.08679 | GCAGTTCTGTTGTCA TCCCGTGG CTTTATGA CCACGGGA TCTTACATCACAGAC TERM 911 1013495 - 1013475 - R 100 -12.6 -3.01924 | overlap 1013477 GACTGTGTCCTAAGA TACCGCGG TCGAG CCGCGGTA CGACATTAAATGGAA TERM 912 1013493 - 1013477 - R 85 -10.8 -3.06696 | overlap 1013475 CTGTGTCCTAAGATA CCGCGG TCGAG CCGCGG TACGACATTAAATGG RC1086 1014502 - 1013519 - | putative beta-glucosidase RC1087 1014829 - 1014506 - | hypothetical protein himA 1015305 - 1015018 - | integration host factor alpha-subunit TERM 913 1015421 - 1015364 - R 90 -10.7 -3.66589 | gap 1, opp_overlap 1015379 1015411, overlap 1015354 1015407 AAGGAGAAACTATAA GTTTCGACGAAGCAATCTCA-GAAGTTG ATC CTACTTTATGAGATTGCTGCGTCGATGC TACGCATCTCCTCGC RC1089 1015931 - 1015452 - | hypothetical protein bcp 1016392 - 1016862 + | bacterioferritin comigratory protein TERM 914 1016942 - 1016979 + T 79 -7.7 -4.21744 | gap 1, opp_overlap 1016923 1016947, overlap 1016971 TCTCAGGATATTTGA CGAGATTGCCACGCAGCC TAC GGCTGC-TCGCAATGACG TTTCATTTCTTCCAT TERM 915 1016974 - 1016947 - T 74 -9.2 -2.80443 | gap 1, opp_overlap 1016942 1016971, overlap 1016923 GGATATTTGACGAGA TTGCCACGCAGCC TAC GGCTGC-TCGCAA TGACGTTTCATTTCT htrB 1017854 - 1016982 - | lipid A biosynthesis lauroyl acyltransferase TERM 916 1017835 - 1017845 + gT 72 -2.6 -5.40004 | ATTAAATATCTAAGC TTTT TTA AAAA TTTTTTCATTTAATA lpxK 1018794 - 1017829 - | tetraacyldisaccharide 4'-kinase RC1093 1019652 - 1018798 - | putative periplasmic protein RC1094 1020005 - 1019652 - | hypothetical protein TERM 917 1020452 - 1020502 + r 100 -21.5 -3.87075 | gap 1, opp_overlap 1020446 1020498, overlap 1020456 ATGACCAACTCGCAC GCATG-GCTCTATGTCATTCCCGC GAAA GCGGGAATGACATAGAGCATATAC TTTATAAACCATACT TERM 918 1020456 - 1020497 + r 100 -24.7 -3.05997 | opp_overlap 1020446, overlap 1020452 CCAACTCGCACGCAT GGCTCTATGTCATTCCCGC GAAA GCGGGAATGACATAGAGCA TATACTTTATAAACC RC1095 1020870 - 1020718 - | hypothetical protein TERM 919 1020915 - 1020941 + r 87 -11 -3.41394 | overlap 1020913 1020917 TTTTACCATCAGCGG CAGTATGTGCAA AAT TTGCACATACTA TATTGTCTAGTTTTC TERM 920 1020917 - 1020939 + r 100 -13.6 -3.2575 | overlap 1020915 1020913 TTACCATCAGCGGCA GTATGTGCAA AAT TTGCACATAC TATATTGTCTAGTTT ligA 1023205 - 1021136 - | NAD-dependent DNA ligase LigA TERM 921 1021495 - 1021507 + g 72 -4.9 -4.76041 | TATCACCGATTCCTT CTAAA TTC TTTAG TTTTTGATAAATGTC TERM 922 1021960 - 1021944 - G 71 -8.1 -3.31144 | TCTTCAGGCGTATAA TGCAATT TAG AATTGCA TGACAGACAAAATAA TERM 923 1022968 - 1022985 + g 74 -7.1 -4.10429 | CTTGATGCGTAACTT TAGCAAA TTTA TTTGCTA TTTTAGCCCCTACTT tgt 1024576 - 1023491 - | queuine tRNA-ribosyltransferase RC1098 1025194 - 1025493 + | putative (p)ppGpp 3-pyrophosphohydrolase RC1099 1025465 - 1025638 + | putative (p)ppGpp 3-pyrophosphohydrolase TERM 924 1025645 - 1025633 - T 70 -4.1 -4.93547 | TTAATTAAGCAAAAA CGATA GGA TACCG CACTTATAAAATTAT RC1100 1026036 - 1025860 - | putative proline/betaine transporter RC1101 1026395 - 1026162 - | putative proline/betaine transporter RC1102 1026626 - 1026399 - | putative proline/betaine transporter TERM 925 1027097 - 1027083 - H 72 -2.8 -5.38951 | AATTGATAGAAAAAA GCTATA ATA TATTGC GATGTTTTTTATAGT RC1103 1027213 - 1027455 + | hypothetical protein RC1104 1027604 - 1027825 + | hypothetical protein TERM 926 1028004 - 1027977 - T 81 -9.2 -3.6806 | opp_overlap 1027971 1027967, overlap 1027978 ACAGAGTTATTTAAA GCTCGGTTTAGA GTTA CCTAAACCGAGA GATAAATTACTACTT TERM 927 1028003 - 1027978 - T 100 -12.7 -2.80354 | opp_overlap 1027971 1027967, overlap 1027977 CAGAGTTATTTAAAG CTCGGTTTAGA GTTA CCTAAACCGAG AGATAAATTACTACT RC1105 1028304 - 1028014 - | hypothetical protein TERM 928 1028887 - 1028869 - R 100 -10.4 -5.9218 | opp_overlap 1028867 TACACAATAAAAAAA CGAATCTA AAC TAGATTCG GCTAAATTTAATGAT RC1106 1029371 - 1028922 - | ABC transporter substrate binding protein RC1107 1029695 - 1029396 - | hypothetical protein TERM 929 1029627 - 1029601 - G 74 -7.5 -3.91716 | GGACGCCCCAAATAA TCAATATTACG GCTTT CATAATATTGA TTCAAAAACTCATCT rnhA 1030150 - 1029683 - | ribonuclease H TERM 930 1029724 - 1029736 + g 74 -7.7 -3.85817 | TAGCAGTTTCTCTTC CTTGC ACT GCAAG TTTATCGGCAGCAAT RC1109 1030623 - 1030150 - | hypothetical protein TERM 931 1030543 - 1030553 + g 70 -4 -5.11112 | ATCCCAATATAAATT TTCA TGC TGAA TTTTTGTTAGAATTT TERM 932 1032020 - 1032008 - g 82 -7.7 -4.67755 | opp_overlap 1032007 AGATTTACGTAAAAA TCCTC ATG GAGGA GTATTAGTAAAAATA RC1110 1031403 - 1032215 + | hypothetical protein TERM 933 1032707 - 1032687 - g 79 -7 -4.70353 | overlap 1032681 CACAAGAAAGCAAAA TAGCAAAA GCAGA TTTTGCTA TAAATAGCGGCGTTG TERM 934 1032757 - 1032747 - g 74 -5.4 -4.86385 | ACTTGGAAAAACAAA TAGC GAA GCTA ATAAAGGATTTGGAA coaE 1032209 - 1032784 + | dephospho-CoA kinase dnaQ 1032772 - 1033464 + | DNA polymerase III subunit epsilon TERM 935 1033466 - 1033496 + F 80 -9.8 -3.30124 | opp_overlap 1033467, overlap 1033467 AAACTGCTTATTAAA ACGTCATTGCGA TAGTCGC TCGCAATGACGA TTATCAACAATCCCC TERM 936 1033467 - 1033495 + F 100 -13.3 -2.57931 | opp_overlap 1033467, overlap 1033466 AACTGCTTATTAAAA CGTCATTGCGA TAGTCGC TCGCAATGACG ATTATCAACAATCCC TERM 937 1033495 - 1033467 - f 100 -13.3 -4.25848 | opp_overlap 1033467 1033466 AACTGCTTATTAAAA CGTCATTGCGA TAGTCGC TCGCAATGACG ATTATCAACAATCCC surf1 1033518 - 1034240 + | surfeit locus protein 1 TERM 938 1034279 - 1034244 - f 93 -8.3 -5.10004 | gap 1, overlap 1034246 AAAAATAATTAAAAA GACTG-GACCCCGTGG TCAAG CCACGGGGTAACAGTA GAAAATCGATACATA TERM 939 1034277 - 1034246 - f 100 -10.9 -4.12448 | gap 1, overlap 1034244 AAATAATTAAAAAGA CTG-GACCCCGTGG TCAAG CCACGGGGTAACAG TAGAAAATCGATACA TERM 940 1034572 - 1034552 - g 74 -9.7 -2.71144 | CACTTTTCTTAATGA GCGGCAATA AGC CATCGCCGC AAGACACAGAAAACG TERM 941 1035957 - 1035943 - g 82 -8.6 -4.01158 | AATCTGATCAAAGAA CTTAGC AAA GCTAAG CTTAAAGTTGAGGTA RC1114 1034296 - 1036764 + | ATP-dependent helicase RC1115 1037806 - 1037237 - | hypothetical protein TERM 942 1037329 - 1037341 + g 70 -6.3 -4.23218 | opp_overlap 1037328 AAGCTTGTAATTCAT GAACA TTT TGTTC TATTTTTTCATAATT fabD 1038015 - 1038959 + | acyl-carrier-protein S-malonyltransferase RC1117 1039299 - 1039571 + | hypothetical protein RC1118 1039830 - 1040144 + | hypothetical protein TERM 943 1040239 - 1040253 + T 74 -8.6 -3.31792 | opp_overlap 1040251, overlap 1040227 1040226 AGTGGCCGAAGGCGG CGGTTT GCT AAACCG TTATACGGGTCATAC TERM 944 1040628 - 1040638 + T 85 -2.6 -5.86061 | overlap 1040627 AGGGATTGGAGGGCT TTTT GTA AAAA TTTTTTTTAATAGAA RC1119 1041042 - 1040677 - | hypothetical protein RC1120 1041428 - 1041616 + | hypothetical protein TERM 945 1041966 - 1042002 + F 85 -7.6 -4.83615 | opp_overlap 1041976, overlap 1041976 CTTGACCGCGGGATC CAGTTAAAAATACTAA AATTA TTAGTATTTTTTATTG TTTTTATGGACCCTG TERM 946 1041976 - 1041992 + F 85 -3.8 -5.80727 | opp_overlap 1041976, overlap 1041966 GGATCCAGTTAAAAA TACTAA AATTA TTAGTA TTTTTTATTGTTTTT RC1121 1042563 - 1042811 + | hypothetical protein RC1122 1042870 - 1043052 + | hypothetical protein RC1123 1043069 - 1043242 + | hypothetical protein TERM 947 1043789 - 1043776 - T 76 -2.5 -5.63374 | GCAACAGTAAAAAAA TAATT ACGA AATTA GAAACTGCTAACATT RC1124 1044676 - 1044311 - | hypothetical protein RC1125 1044914 - 1044723 - | hypothetical protein RC1126 1045316 - 1044915 - | hypothetical protein RC1127 1045642 - 1045289 - | hypothetical protein TERM 948 1045479 - 1045489 + gr 72 -4 -5.08015 | TTTATCCAGTCAATT TCTT CTG AAGA TTTATTTTTTAGCTT TERM 949 1045517 - 1045535 + gr 71 -6.8 -3.97108 | CTTAATTAAATCCCG TTTTTGCT CAT AGCAAGAA TTGTATTTTGCGGTT RC1128 1046055 - 1045774 - | hypothetical protein TERM 950 1046075 - 1046061 - R 73 -5.8 -4.63218 | opp_overlap 1046061 CCTCTTTCAATAAAA GTTATT TAA AATAAC TTAAATCTTTATGAT RC1129 1046793 - 1046323 - | hypothetical protein RC1130 1047081 - 1046815 - | hypothetical protein RC1131 1047232 - 1047011 - | hypothetical protein RC1132 1047429 - 1047247 - | hypothetical protein RC1133 1047795 - 1048070 + | hypothetical protein TERM 951 1048097 - 1048079 - T 75 -4.6 -5.09895 | opp_overlap 1048077 1048079 GAGTTAGGCAAAAAA TTTAGGGA ATA TTCCTAAA TATTTTGGTCAAAAG RC1134 1049125 - 1048361 - | acetyl-CoA acetyltransferase TERM 952 1048632 - 1048645 + g 76 -5.3 -5.08824 | TTAACGCTCCAACCT GCTTT ACTT AAAGC TTTTTTGGATGCAGG RC1135 1049536 - 1049216 - | putative acetyl-CoA acetyltransferase RC1136 1050190 - 1049735 - | putative poly-beta-hydroxybutyrate polymerase TERM 953 1050046 - 1050033 - G 74 -3.1 -5.4251 | CTTATATAGAAAAAA TGAGA AAAA TCCCA CGGGCAGGTAAGTAA RC1137 1050502 - 1050239 - | putative poly-beta-hydroxybutyrate polymerase TERM 954 1051455 - 1051475 + G 73 -9.1 -2.83692 | overlap 1051454 1051458 1051464 TAGTTCAAGTATCCA CGACAATTG TGG CAATTGTTG CTATTATTTGTTGTT tlc5 1050767 - 1052266 + | ADP,ATP carrier protein TERM 955 1052352 - 1052328 - T 73 -8.6 -3.14881 | overlap 1052316 1052330 1052346 CAAGTCTTTGACCAA GATACCGTGG TCAAG CCACGGTATG ACACCGAACGCGTTT TERM 956 1052350 - 1052330 - T 91 -11.2 -3.13522 | overlap 1052316 1052328 1052346 AGTCTTTGACCAAGA TACCGTGG TCAAG CCACGGTA TGACACCGAACGCGT RC1139 1053163 - 1052789 - | hypothetical protein TERM 957 1053631 - 1053656 + G 80 -6.1 -4.78237 | opp_overlap 1053634 GAATTTTATGTGATA GCAGGTGATTT ACTT AAATCTCCGGC TTTTATTCTCAAATG RC1140 1053607 - 1053783 + | hypothetical protein tlyC 1054735 - 1053836 - | hemolysin C TERM 958 1054291 - 1054304 + g 76 -5.3 -5.00616 | overlap 1054285 GAGCTGCAATTATAT GCTTA CGTA TAAGC TTTTTTAAACGACCG TERM 959 1054728 - 1054738 + g 82 -2.6 -6.01187 | TCTTTTTTTGAAGAT TTTA ACA TAAA TTTTTTTATTTAGTT RC1142 1055255 - 1054752 - | putative metalloprotease RC1143 1055485 - 1055282 - | hypothetical protein RC1144 1055804 - 1055574 - | hypothetical protein lipA 1056848 - 1055940 - | lipoyl synthase glyA 1058085 - 1056823 - | serine hydroxymethyltransferase TERM 960 1057314 - 1057298 - GR 70 -8.7 -2.52193 | overlap 1057297 ATTATATGCATTAAC GGACCAC CTT GTAGTCC TGGAAATAATGCAGA RC1147 1058850 - 1058200 - | putative serine esterase grxC2 1059341 - 1059006 - | glutaredoxin-like protein grla nth 1059395 - 1060027 + | endonuclease III RC1150 1060216 - 1060043 - | hypothetical protein TERM 961 1060280 - 1060300 + r 71 -4.7 -4.76087 | AAGTTTTGTCATTAT CCTCAATAA GTT TTATAGGGG TTTGTTTATTCTCTA RC1151 1060642 - 1060334 - | hypothetical protein RC1152 1060995 - 1060630 - | hypothetical protein RC1153 1061431 - 1060955 - | hypothetical protein TERM 962 1061079 - 1061089 + gH 82 -4 -5.52384 | opp_overlap 1061079 TTATTTTTTTTAAAT TTCT CTA AGAA TTTTTTTAATAAAGC TERM 963 1061428 - 1061442 + gH 74 -2.9 -5.43974 | AAGATAGTGCTTCTT TCAAT TGATC ATTGA TTTTTCTTTCATTTT RC1154 1061630 - 1061824 + | hypothetical protein RC1155 1062243 - 1061896 - | hypothetical protein RC1156 1062536 - 1062228 - | hypothetical protein RC1157 1062781 - 1062545 - | hypothetical protein TERM 964 1062723 - 1062738 + g 76 -3.3 -5.48825 | AATAAATCTTTATTC TCTTC TACTCC GAAGA TTTTTTTAAATGCTA RC1158 1063702 - 1062857 - | hypothetical protein TERM 965 1064231 - 1064215 - g 77 -8.1 -3.82604 | opp_overlap 1064214 TTACGCAAGTAACAA CCATAAA GAT TTTATGG CATTATTACCTAAAG RC1159 1063727 - 1064845 + | hypothetical protein tatA 1065138 - 1064977 - | twin argininte translocase protein A pgpA 1065219 - 1065818 + | phosphatidylglycerophosphatase A rplU 1065907 - 1066224 + | 50S ribosomal protein L21 rpmA 1066249 - 1066509 + | 50S ribosomal protein L27 TERM 966 1066639 - 1066655 + F 72 -6.7 -4.14739 | opp_overlap 1066633 1066632 AAAAATAATTTAAAG TACTAAT ATT ATTAGTA TTTTAAGCTGGATCC lysC 1066794 - 1067999 + | aspartate kinase RC1165 1068283 - 1068777 + | hypothetical protein RC1166 1069178 - 1069429 + | hypothetical protein RC1167 1069529 - 1069690 + | hypothetical protein RC1168 1070026 - 1069823 - | hypothetical protein RC1169 1070372 - 1070112 - | hypothetical protein proP5 1071781 - 1070474 - | proline/betaine transporter RC1171 1072360 - 1072043 - | hypothetical protein RC1172 1072710 - 1072363 - | hypothetical protein RC1173 1073070 - 1072717 - | hypothetical protein RC1174 1077825 - 1073074 - | hypothetical protein TERM 967 1073205 - 1073249 + g 71 -3.1 -5.15167 | opp_overlap 1073208 1073212 1073216, overlap 1073208 1073212 1073216 AGTTATTATTATTAT CAATCCATAAATCTAAATCAA TAG TTGTTTTAGATTTATTAATTA TTTTTATTAATAATC TERM 968 1073242 - 1073212 - G 77 -10 -2.57974 | opp_overlap 1073212 1073208 1073205 1073216, overlap 1073208 1073216 ATTATTATCAATCCA TAAATCTAAATCAA TAG TTGTTTTAGATTTA TTAATTATTTTTATT TERM 969 1073212 - 1073242 + g 87 -10 -3.78633 | opp_overlap 1073208 1073212 1073216, overlap 1073208 1073205 1073216 ATTATTATCAATCCA TAAATCTAAATCAA TAG TTGTTTTAGATTTA TTAATTATTTTTATT TERM 970 1073216 - 1073238 + g 74 -6.4 -4.43642 | opp_overlap 1073212 1073208 1073216, overlap 1073212 1073208 1073205 TTATCAATCCATAAA TCTAAATCAA TAG TTGTTTTAGA TTTATTAATTATTTT TERM 971 1077198 - 1077214 + g 71 -5.3 -4.67755 | opp_overlap 1077200, overlap 1077193 CTTTAAAATTTAATT TATAATT ATC AATTATA TTTTTAGATAAATCT TERM 972 1078913 - 1078901 - g 80 -6.3 -4.84262 | CAATAATTAATAAAA TCGAT TTA ATCGA AGCTAGTAAAATCTT trmE 1077910 - 1079247 + | tRNA modification GTPase TrmE RC1176 1079640 - 1080941 + | hypothetical protein TERM 973 1081082 - 1081101 + T 71 -7.8 -3.49086 | CAAAACTGATGCAAT CCTCGACT TCAC GGTCGGGG TTATAATAGTTATGT RC1177 1081806 - 1081567 - | hypothetical protein RC1178 1082306 - 1081977 - | hypothetical protein RC1179 1082494 - 1082306 - | hypothetical protein RC1180 1082676 - 1082512 - | hypothetical protein RC1181 1083100 - 1082690 - | putative multidrug resistance protein recA 1083335 - 1084423 + | recombinase A fabG 1084395 - 1085141 + | 3-ketoacyl-(acyl-carrier-protein) reductase RC1184 1085275 - 1085102 - | hypothetical protein TERM 974 1085154 - 1085177 + g 84 -6.2 -5.31275 | opp_overlap 1085146 1085154, overlap 1085146 1085161 1085162 TAAAAATTAATAAGA TTATTTTGTG CTAG CATAAAATAA TTTTTTGTGCTAGAA acpP 1085321 - 1085566 + | acyl carrier protein TERM 975 1085861 - 1085846 - g 74 -6.2 -4.48333 | overlap 1085858 ATAGACTAAGTAAAA TGGATA AATT TATCCA TTACGGAGTAGCGGC TERM 976 1086187 - 1086177 - g 70 -8.2 -3.04122 | opp_overlap 1086175 1086177, overlap 1086174 GCGTATGATAAAGCA CGGC TAT GCCG ATGTTATGATCGCAG fabF 1085599 - 1086885 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 977 1087044 - 1087067 + F 85 -8.4 -4.39329 | opp_overlap 1087044 AGGAATCCAGTAAAA CATATAAAAA CTTA TTTTTATATG TTTATTCTATCAAAT TERM 978 1087067 - 1087044 - f 81 -8.4 -4.31379 | opp_overlap 1087044 AGGAATCCAGTAAAA CATATAAAAA CTTA TTTTTATATG TTTATTCTATCAAAT TERM 979 1088086 - 1088065 - g 77 -7.5 -4.06182 | opp_overlap 1088064 1088065, overlap 1088063 TTAGTTATAAAAATA CTAAAATTA TCAA TAATTTTAG CTTTCGTGTAAAAAA uup 1087167 - 1088948 + | ABC transporter ATP-binding protein Uup RC1188 1088998 - 1090095 + | hypothetical protein TERM 980 1090168 - 1090152 - g 100 -10.9 -5.09762 | CCTGAACAAAGAAAA GCAGCTT TAG AAGCTGC AAAAGTACAATTTGA RC1189 1090113 - 1090343 + | hypothetical protein TERM 981 1090349 - 1090380 + T 93 -11.8 -3.12352 | opp_overlap 1090354, overlap 1090354 AATAATATAACATTC TAAAAGCTGTAACT ATAT AGTTGCAGCTTTTG TATCATTTTGAATTA TERM 982 1090354 - 1090375 + T 100 -9.5 -4.6709 | opp_overlap 1090354, overlap 1090349 TATAACATTCTAAAA GCTGTAACT ATAT AGTTGCAGC TTTTGTATCATTTTG TERM 983 1090375 - 1090354 - T 77 -7.3 -4.20712 | opp_overlap 1090354 1090349 TATAACATTCTAAAA GCTGTAACT ATAT AGTTGCAGC TTTTGTATCATTTTG RC1190 1090552 - 1090361 - | hypothetical protein RC1191 1090938 - 1090636 - | hypothetical protein RC1192 1091136 - 1090954 - | hypothetical protein RC1193 1091465 - 1091211 - | hypothetical protein TERM 984 1091464 - 1091454 - G 81 -3.2 -5.76237 | opp_overlap 1091463, overlap 1091455 TATAGAAAGAAAAAA CGAC AAA GTCA AAACGCTTTGTCTCG gmk 1092151 - 1091462 - | guanylate kinase TERM 985 1092149 - 1092159 + g 70 -4 -4.9448 | TTTATTTTTTGTTGT CATA TTT TATG TTTTATTTCGTAGGT TERM 986 1092278 - 1092290 + r 76 -7.7 -4.02856 | AGTCATGCAAAATTC GCTTG TAT CAAGC TTTATGAATTATTCT RC1195 1092621 - 1092292 - | hypothetical protein TERM 987 1092646 - 1092677 + r 88 -9 -4.4195 | opp_overlap 1092649, overlap 1092649 AGCAAAAATCTAGTA AAACCATATAAAAA CAAG TTTTTATATGGTTA TTTTATCAAATATAT TERM 988 1092674 - 1092649 - R 100 -10.7 -4.35675 | opp_overlap 1092646 1092649 AAAAATCTAGTAAAA CCATATAAAAA CAAG TTTTTATATGG TTATTTTATCAAATA TERM 989 1092649 - 1092674 + r 100 -10.7 -4.32067 | opp_overlap 1092649, overlap 1092646 AAAAATCTAGTAAAA CCATATAAAAA CAAG TTTTTATATGG TTATTTTATCAAATA RC1196 1092865 - 1092683 - | hypothetical protein mreC 1093717 - 1092878 - | rod shape-determining protein mreC mreB 1094760 - 1093720 - | rod shape-determining protein mreB RC1199 1096059 - 1094971 - | hypothetical protein TERM 990 1096437 - 1096457 + r 72 -6.8 -4.16279 | opp_overlap 1096437 TTATAAATAAAAAAA GGCCGAGT AGTAA ACTCGACC TTTTAGGATACTATA TERM 991 1096457 - 1096437 - R 100 -9 -6.02919 | opp_overlap 1096437 TTATAAATAAAAAAA GGCCGAGT AGTAA ACTCGACC TTTTAGGATACTATA pal 1096954 - 1096487 - | peptidoglycan-associated lipoprotein precursor RC1201 1097171 - 1097413 + | hypothetical protein fabH 1098384 - 1097428 - | 3-oxoacyl-(acyl carrier protein) synthase III rpmF 1098592 - 1098392 - | 50S ribosomal protein L32 RC1204 1098688 - 1099161 + | hypothetical protein TERM 992 1099935 - 1099913 - g 84 -6.4 -5.19275 | opp_overlap 1099899, overlap 1099899 ATCGATAAAACAAAA TATCGATATA CTT TTTATCGATA CAGCAGGTAGGCTTC ftsY 1099365 - 1100276 + | cell division protein ftsY TERM 993 1100443 - 1100433 - f 78 -4 -5.34655 | TAATTAAAAATAAAA TCAT AAA ATGA CTCAAAAAAATACCT polA 1100440 - 1103067 + | DNA polymerase I TERM 994 1103901 - 1103912 + F 70 -5.8 -4.30987 | opp_overlap 1103901 1103900 AAATACCTAATTAAT CCGA CGGG TCGG TTTGTTATAGGCGGT RC1207 1104433 - 1104711 + | hypothetical protein TERM 995 1104852 - 1104840 - g 79 -3.5 -5.52909 | GAACAGTTAAAAAAA TTTTT AGA AAAAA CTACAAATGAAATAT RC1208 1104750 - 1105010 + | hypothetical protein RC1209 1105183 - 1105389 + | hypothetical protein dnaE 1109209 - 1105664 - | DNA polymerase III subunit alpha TERM 996 1105713 - 1105695 - Gg 90 -9.6 -4.28049 | opp_overlap 1105694 1105695 TTTAAAATCTCAAAA TCTTGCCC TTG GAGCAAGA ATTTTTCAGGTAATG TERM 997 1105733 - 1105745 + Gg 79 -4.9 -5.1287 | TTCAGGTAATGTAAT TTTTG CTA CAAAA TTTTTTACATCTGCG RC1210 1105467 - 1105772 + | hypothetical protein TERM 998 1106636 - 1106652 + gT 80 -9.4 -3.43039 | overlap 1106626 1106634 1106632 ACCCGCGATGTCACA CCGTGG CTTGA CCACGG TATCTTTTGAAATTT TERM 999 1108767 - 1108794 + gT 75 -9.2 -3.05046 | gap 1, opp_overlap 1108765 1108762, overlap 1108766 CGTGCAAACAGCATC GCTTGCT-CCTCG TTA CGAGCTAGCAAGC ATTTTCCGACAATAC udg 1110674 - 1109376 - | UDP-glucose 6-dehydrogenase TERM 1000 1110124 - 1110108 - G 79 -8.1 -4.08546 | opp_overlap 1110111 ATCAGTAACCACAAA CTTTACA CCT TGTAAAG GTGCATAAATTTTTC TERM 1001 1111697 - 1111685 - g 76 -3.5 -5.43487 | opp_overlap 1111685 1111686, overlap 1111678 1111686 AAATTAGATAAAAAA TTTTT TAA AAAAA ATATTTTAGTAGAAG TERM 1002 1112069 - 1112043 - g 72 -7.4 -3.77832 | overlap 1112045 CGGCAAATTCAATAA TAGAGCTAATAA TTC CTATTAGCCCCA ATATCCCTAATAGCT TERM 1003 1112067 - 1112045 - g 71 -7.8 -3.46873 | overlap 1112043 GCAAATTCAATAATA GAGCTAATAA TTC CTATTAGCCC CAATATCCCTAATAG TERM 1004 1113386 - 1113372 - g 72 -5.7 -4.42238 | CTATTGTAACTAAAA TACCG GTAGT CGGTA AAATATTTTCCAAAG RC1213 1110923 - 1113433 + | hypothetical protein TERM 1005 1113640 - 1113624 - g 73 -4.5 -5.07971 | opp_overlap 1113624 GAAAACAACTAAAAA TACTAAC AAT ATTAGTA TTTGGATCCTGCTAC TERM 1006 1113748 - 1113762 + G 77 -4.3 -5.18357 | opp_overlap 1113748 AATAATAATAGAATA TTCTG TAAAT CAGAA TTTTTTACTGAATTG ampG3 1113460 - 1115106 + | ampG protein TERM 1007 1115324 - 1115305 - g 87 -8.6 -4.25283 | gap 1 AGTGTTTTATTAAAA CCGCTT-GC TAA GCTAAGCGG TGATACTACGGTACG tatC 1115173 - 1115931 + | sec-independent protein translocase protein TatC TERM 1008 1116912 - 1116900 - g 79 -2.7 -5.75342 | overlap 1116901 1116911 TTGCGGCAAAAAAAA CCTAT GAT ATAGA AGTATGGCTTCCGGG serS 1115909 - 1117186 + | seryl-tRNA synthetase virB4 1117534 - 1119966 + | virB4 protein precursor TERM 1009 1120030 - 1120020 - f 74 -3.2 -5.34208 | AAAAAAAATTAAAAA GGAC TGG ATCC CGCTACAAGCTCGTG RC1218 1120102 - 1123590 + | hypothetical protein TERM 1010 1123791 - 1123809 + G 88 -11.8 -2.95884 | opp_overlap 1123788 GTGAATATTATACTT GCTTTCTC ATT GAGAAAGC TATGTCACTTGATAA terC 1123595 - 1124500 + | tellurium resistance protein TerC RC1220 1124544 - 1125257 + | hypothetical protein RC1221 1125343 - 1127007 + | hypothetical protein TERM 1011 1127084 - 1127098 + G 81 -10 -2.99259 | overlap 1127081 1127086 ATTTATTGATTCTCC TACGCC AAT GGCGTA TAATTATTATGAGTA TERM 1012 1127086 - 1127096 + G 70 -8.2 -3.04443 | overlap 1127084 1127081 TTATTGATTCTCCTA CGCC AAT GGCG TATAATTATTATGAG RC1222 1127050 - 1127286 + | hypothetical protein TERM 1013 1127348 - 1127367 + G 72 -5.8 -4.37886 | gap 1, opp_overlap 1127347 TACAATGAAAATATG CCGG-TATT TTT AATAACCGG TTTTATAAAAAGTAA RC1223 1127345 - 1127773 + | hypothetical protein TERM 1014 1127936 - 1127952 + GF 75 -5.9 -4.7173 | GTGCAGGGCTTATGA TTTTGCT TGG AGCAGAA TTTTTAGCTATGATG nuoJ 1127806 - 1128423 + | NADH dehydrogenase subunit J nuoK 1128398 - 1128730 + | NADH dehydrogenase subunit K nuoL1 1128721 - 1130703 + | NADH dehydrogenase subunit L TERM 1015 1131490 - 1131502 + G 74 -6.3 -4.46926 | overlap 1131493 GATAATATTCCATTA TTTGC TCA GCAAA TTTTATGGTGGGCTA nuoM 1130857 - 1132338 + | NADH dehydrogenase subunit M ccmA 1132668 - 1133327 + | cytochrome c biogenesis protein CcmA TERM 1016 1133573 - 1133593 + T 78 -3.4 -5.56112 | gap 1, overlap 1133575 CTATTATGAGTTCCT CT-TATTCC AGTA GGAATATAG TTTTTTAGTTTTTAT TERM 1017 1133818 - 1133798 - T 79 -8.4 -4.00469 | opp_overlap 1133798 1133795 TGAAGAGTAATTAAA CGAGTATA TTACC TATACTCG TAATCTTTGTGTAGT nuoI 1134285 - 1133806 - | NADH dehydrogenase subunit I nuoH 1135491 - 1134472 - | NADH dehydrogenase subunit H TERM 1018 1135550 - 1135510 - R 100 -13.6 -2.79183 | gap 1, overlap 1135531 TGTACTCTTATTATA TCATTCCCGCAAAAG-TGA GAAT CCAGCTTTTGCAGGAATGA CATACGGGGTGAGAA nuoG 1137610 - 1135580 - | NADH dehydrogenase subunit G RC1232 1137954 - 1137598 - | hypothetical protein TERM 1019 1138014 - 1138041 + r 74 -9.2 -2.80113 | gap 1 CTATCTGAGCTGTCA TTGCGA-GCAGCC GTA GGCTGCGTGGCAA TCTCATAAAATAATA acnA 1140759 - 1138123 - | aconitate hydratase TERM 1020 1138410 - 1138388 - G 89 -10.7 -3.78022 | CCCATACCTACTAAA TTTGAGCGA TGTAT TCGCTCAAA GCTCTCGGCAATCAC TERM 1021 1140073 - 1140085 + g 74 -9.1 -3.06815 | AGGTTGACCTAGCAT GGCAG CTT CTGCC TCTATTCCGCCGACT atpC 1141279 - 1140941 - | F0F1 ATP synthase subunit epsilon TERM 1022 1141334 - 1141297 - R 71 -5.8 -4.45723 | gap 2, overlap 1141289 1141298 1141300 AATAATATAGTAAAA TTACTACGTCATTCCCGC CTAC GCGGGAATGACAT--CAA CGTCACTTCAACGTC TERM 1023 1141333 - 1141300 - R 100 -12.5 -3.17875 | overlap 1141289 1141297 1141298 AATATAGTAAAATTA CTACGTCATTCCCGC CTAC GCGGGAATGACATCA ACGTCACTTCAACGT atpD 1142836 - 1141337 - | F0F1 ATP synthase subunit beta atpG 1143902 - 1142931 - | F0F1 ATP synthase subunit gamma atpA 1145567 - 1144035 - | F0F1 ATP synthase subunit alpha TERM 1024 1145030 - 1145041 + g 80 -7.2 -4.70879 | opp_overlap 1145030 TAATAATAGTATCAA CGGC TATA GCCG TTTTTCCAGTTTGCC TERM 1025 1145458 - 1145470 + g 80 -9.1 -3.68073 | TAAATTTGGGCTATA CCGTC ACC GACGG TTATTACCTGCCCTA atpH 1146287 - 1145733 - | F0F1 ATP synthase subunit delta TERM 1026 1146256 - 1146230 - G 74 -8.8 -3.24747 | overlap 1146233 1146235 CTTGTATATTATCAA CCATAGCGTTAT TTA ATAACGCTACTG CATAATTCTTGATTA TERM 1027 1146253 - 1146233 - G 86 -11.3 -2.80988 | overlap 1146230 1146235 GTATATTATCAACCA TAGCGTTAT TTA ATAACGCTA CTGCATAATTCTTGA TERM 1028 1146251 - 1146235 - G 75 -9.5 -2.94962 | overlap 1146233 1146230 ATATTATCAACCATA GCGTTAT TTA ATAACGC TACTGCATAATTCTT pdhD 1147828 - 1146449 - | dihydrolipoamide dehydrogenase TERM 1029 1147380 - 1147390 + g 71 -6.8 -4.08767 | ATTTGTTTACCGTCA GGCT TAA AGCC TTTTAAAACCCTAGA RC1240 1148143 - 1147979 - | DPS family stress induced DNA-binding proteins RC1241 1148605 - 1148910 + | hypothetical protein RC1242 1149451 - 1149744 + | hypothetical protein RC1243 1150127 - 1149825 - | putative beta-lactamase RC1244 1150538 - 1150266 - | putative beta-lactamase mrcA 1153072 - 1150700 - | penicillin-binding protein 1a RC1246 1154413 - 1153076 - | hypothetical protein RC1247 1155051 - 1154836 - | hypothetical protein RC1248 1155581 - 1155429 - | hypothetical protein RC1249 1156449 - 1156096 - | hypothetical protein RC1251 1157260 - 1156757 - | hypothetical protein RC1250 1156619 - 1156864 + | hypothetical protein kefB 1158965 - 1157229 - | glutathione-regulated potassium-efflux system protein kefB TERM 1030 1158388 - 1158398 + gr 81 -8.2 -4.11394 | opp_overlap 1158387 1158388 AATATTGTAAGTAAG GCCG TTA CGGC TTTTAAGAGTGCAAT RC1253 1159279 - 1158953 - | hypothetical protein RC1254 1159435 - 1159674 + | hypothetical protein TERM 1031 1159762 - 1159816 + T 85 -8.3 -4.64657 | gap 1, opp_overlap 1159777 1159780 1159783, overlap 1159773 1159777 ATAGTAATCCGCTAT TCGGTGTGTAATTAAGAATAAGGATT TTAA AATCCTTATTCTTAATTG-ATGCGGG TTTTTAGAAATTTAC TERM 1032 1159773 - 1159806 + T 100 -15.7 -3.1883 | opp_overlap 1159777 1159780 1159783, overlap 1159762 1159777 CTATTCGGTGTGTAA TTAAGAATAAGGATT TTAA AATCCTTATTCTTAA TTGATGCGGGTTTTT TERM 1033 1159802 - 1159777 - T 95 -12.1 -3.33696 | opp_overlap 1159773 1159762 1159777, overlap 1159780 1159783 TCGGTGTGTAATTAA GAATAAGGATT TTAA AATCCTTATTC TTAATTGATGCGGGT TERM 1034 1159777 - 1159802 + T 95 -12.1 -3.40073 | opp_overlap 1159777 1159780 1159783, overlap 1159773 1159762 TCGGTGTGTAATTAA GAATAAGGATT TTAA AATCCTTATTC TTAATTGATGCGGGT TERM 1035 1159799 - 1159780 - T 74 -8 -3.81146 | opp_overlap 1159777 1159773 1159762, overlap 1159777 1159783 GTGTGTAATTAAGAA TAAGGATT TTAA AATCCTTA TTCTTAATTGATGCG RC1255 1160227 - 1159820 - | hypothetical protein RC1256 1161058 - 1160783 - | hypothetical protein RC1257 1162172 - 1161645 - | hypothetical protein RC1258 1162443 - 1162156 - | hypothetical protein TERM 1036 1162520 - 1162496 - R 74 -8.7 -3.31144 | opp_overlap 1162496 CTTCTACTGTTATAA CCGGTAAAT ACCGCTG ATTTACCGG CATCAATAGTTTTAG RC1259 1163032 - 1162568 - | hypothetical protein RC1260 1163665 - 1163303 - | hypothetical protein TERM 1037 1163487 - 1163499 + gr 77 -7.7 -3.9644 | CCTATAGTACCGTTA GTACC TCC GGTAC TTGTTATATTACCAG RC1261 1165583 - 1163625 - | putative cell surface antigen RC1262 1166067 - 1165495 - | hypothetical protein RC1263 1166275 - 1165919 - | hypothetical protein RC1264 1166615 - 1166373 - | hypothetical protein TERM 1038 1166777 - 1166791 + H 82 -5 -5.38549 | opp_overlap 1166777 1166772 TTTCTATATAGAAAA GTAACT TAT GGTTAC TTTTTCTTGTTTAAA infA 1167340 - 1167555 + | translation initiation factor IF-1 TERM 1039 1167966 - 1167955 - g 74 -3 -5.38047 | opp_overlap 1167955 CAGTTAGACAAAAAA TAGT TCAG ACTA TTGTTAAGTTCAAAA maf 1167567 - 1168214 + | Maf-like protein TERM 1040 1168202 - 1168222 + T 87 -11.2 -2.90723 | AATGAATTATTGTCA TTCCGCGA CTTGA TCGCGGAA TCTAGTTAAAAATAC TERM 1041 1168243 - 1168257 + T 70 -4.4 -4.96501 | opp_overlap 1168243 TTAAAAATACTAAAA TTATTA ATA TAATAA TTTGTTTTTCTAGAC dksA 1168779 - 1168348 - | dnaK suppressor protein xerC 1170055 - 1169138 - | site-specific tyrosine recombinase XerC RC1269 1170223 - 1170504 + | hypothetical protein RC1270 1171154 - 1170552 - | hypothetical protein TERM 1042 1171274 - 1171247 - R 74 -9.2 -2.82681 | gap 1, opp_overlap 1171242 CAAAATCTCATGAGA TTGCCATGCAGCC TAT GGCTGC-TCGCAA TGACGATTTAGTATC RC1271 1173409 - 1171931 - | hypothetical protein TERM 1043 1173451 - 1173478 + r 75 -9.2 -2.93164 | gap 1, overlap 1173475 CTTATTTTATCGTCA TTGCGA-GCAGCC ATA GGCTGCGTGGCAA TCTCATTAAATATCC RC1272 1175137 - 1173563 - | hypothetical protein TERM 1044 1173649 - 1173659 + g 75 -2.6 -5.66684 | overlap 1173643 CAGAATTTTTAATAT TATA TAT TATA TTTTTTTCTGAATTG TERM 1045 1175280 - 1175304 + r 100 -14.5 -5.73339 | opp_overlap 1175280 TTATAAAGCAAAAAA GCCTATATAGT CAA ACTATATAGGC TTTTTTTATGATTAT TERM 1046 1175304 - 1175280 - R 100 -14.5 -5.42514 | opp_overlap 1175280 TTATAAAGCAAAAAA GCCTATATAGT CAA ACTATATAGGC TTTTTTTATGATTAT rompA 1181396 - 1175331 - | 190-kDa cell surface antigen TERM 1047 1177411 - 1177391 - G 74 -6.9 -4.18494 | opp_overlap 1177395 TACTTGCACCTAAAA CTATTAACG TAC CGTTATTAG TACCACCGGTATTTT TERM 1048 1177412 - 1177422 + g 74 -5.4 -4.74706 | ACGTACCGTTATTAG TACC ACC GGTA TTTTTGACTGTTCCC ftsK 1184249 - 1182015 - | cell division protein ftsK-like protein TERM 1049 1183765 - 1183750 - G 72 -4.8 -4.90079 | opp_overlap 1183750 1183745, overlap 1183745 AGCTTAATAATAAAA TTACTT AAAG AAGTAA ATTTAATTTCAAATA RC1275 1185206 - 1184883 - | hypothetical protein TERM 1050 1185632 - 1185619 - g 71 -6.7 -4.14056 | opp_overlap 1185619 ATTCCAAACGATAAA CCGTT AAAA AACGG TGATATAGTAAATAT map 1185367 - 1186146 + | methionine aminopeptidase RC1277 1186397 - 1186708 + | putative DNA repair protein (RadC) RC1278 1186713 - 1187081 + | putative DNA repair protein (RadC) TERM 1051 1187221 - 1187207 - g 81 -9.2 -3.77808 | opp_overlap 1187207 1187207 1187209 CTCATGATAAGATAA CACCGC GCG GCGGCG GTCTTGCTATTGTAT mraY2 1187068 - 1188051 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase RC1280 1188048 - 1188371 + | hypothetical protein TERM 1052 1188734 - 1188697 - T 100 -13.1 -4.21945 | gap 1, opp_overlap 1188705, overlap 1188705 ACCAAGACATACAAA CA-AAAAAAGGAGTCTTT ATT AAAGACTCCTTTTTCGTG TTAATAGCTTGTAAA TERM 1053 1188725 - 1188705 - T 100 -12.7 -6.04953 | opp_overlap 1188705, overlap 1188697 ATACAAACAAAAAAA GGAGTCTTT ATT AAAGACTCC TTTTTCGTGTTAATA TERM 1054 1188705 - 1188725 + T 100 -12.7 -4.89233 | opp_overlap 1188705 1188697 ATACAAACAAAAAAA GGAGTCTTT ATT AAAGACTCC TTTTTCGTGTTAATA RC1281 1189514 - 1188765 - | hypothetical protein TERM 1055 1189696 - 1189716 + r 89 -11.9 -2.78906 | opp_overlap 1189698, overlap 1189693 1189692 1189698 TTTTGTATTTCTAGA TACCGTGGT TAA GCCACGGTA TGATATTAGGTTATT TERM 1056 1189698 - 1189714 + r 77 -10.1 -2.93236 | opp_overlap 1189698, overlap 1189696 1189693 1189692 TTGTATTTCTAGATA CCGTGGT TAA GCCACGG TATGATATTAGGTTA TERM 1057 1189714 - 1189698 - R 74 -9.4 -2.88544 | opp_overlap 1189698 1189696 1189693 1189692 TTGTATTTCTAGATA CCGTGG TTAAG CCACGG TATGATATTAGGTTA RC1282 1190444 - 1189761 - | hypothetical protein TERM 1058 1190248 - 1190276 + g 71 -5.3 -4.54727 | opp_overlap 1190254 1190255, overlap 1190249 ATATAATAACCGATA CCTAAAGCAACTG GAA CAGTTGTATTAGA TTTTAATTTAACACC TERM 1059 1190249 - 1190275 + g 74 -8.8 -3.32354 | opp_overlap 1190254 1190255, overlap 1190248 TATAATAACCGATAC CTAAAGCAACTG GAA CAGTTGTATTAG ATTTTAATTTAACAC TERM 1060 1190269 - 1190255 - G 71 -8.6 -2.83071 | opp_overlap 1190249 1190248, overlap 1190254 AACCGATACCTAAAG CAACTG GAA CAGTTG TATTAGATTTTAATT TERM 1061 1190482 - 1190495 + r 72 -2.5 -5.35354 | TATTTTAATGGCATA TATAA CATA TTATA TTTTTTAATTCTATA fdxA 1191084 - 1190734 - | ferredoxin ccmC 1191781 - 1191089 - | heme exporter protein C RC1285 1192302 - 1191796 - | cytosine deaminase p34 1193203 - 1192283 - | protein p34 TERM 1062 1193833 - 1193816 - g 76 -3.4 -5.4593 | overlap 1193831 GGAAAACAACAAAAA GCATAC GGTAAT GCATGC CGCCAACCTGACGGA omp 1193390 - 1193869 + | 17 kD surface antigen precursor RC1288 1194000 - 1194464 + | hypothetical protein znuC 1194604 - 1195305 + | zinc ABC transporter ATP-binding protein RC1290 1196169 - 1195402 - | hypothetical protein RC1291 1196389 - 1196099 - | hypothetical protein TERM 1063 1196564 - 1196600 + r 70 -4 -4.96996 | TGATTTACTAATTCT TTAAATCATTTTTAGT TATCT GCTGAAAATCATTTAA TTTATTTTCTTTAAG RC1292 1196852 - 1196556 - | hypothetical protein TERM 1064 1196607 - 1196617 + g 74 -4 -5.16472 | ATCATTTAATTTATT TTCT TTA AGAA TTTTTTGAAATTTTT RC1293 1197238 - 1197044 - | hypothetical protein TERM 1065 1197204 - 1197217 + g 100 -6.7 -5.72053 | TTTTCTTTTGGATCA CTAGC TTTC GCTAG TTTTTTGTTTAATTG uvrA 1200359 - 1197492 - | excinuclease ABC subunit A TERM 1066 1198325 - 1198349 + g 74 -7.9 -3.87373 | overlap 1198326 GAAATACTTTGCTAG TTGGCTCTAAA TGC TTTAGAGCCGC TTTATACAGAGTATG TERM 1067 1198326 - 1198348 + g 86 -11.4 -2.92102 | overlap 1198325 AAATACTTTGCTAGT TGGCTCTAAA TGC TTTAGAGCCG CTTTATACAGAGTAT TERM 1068 1198634 - 1198624 - G 70 -8.2 -3.02144 | opp_overlap 1198624 1198621 CGACCGCCGTGAATA CCGG CTC CCGG TCCTATATCAATAAT TERM 1069 1198951 - 1198965 + g 81 -4.3 -5.43974 | TTGAGTATACGCTCA GCAAT AAATA ATTGC TTTTTATTTAATTTT TERM 1070 1199987 - 1199977 - G 70 -8.2 -3.06492 | CTATGTATCGGAAGA CCGG TTG CCGG AGAGTAAGGAATACC ssb 1200462 - 1200920 + | single-strand DNA-binding protein RC1296 1200932 - 1201762 + | hypothetical protein RC1297 1201803 - 1201970 + | putative proline/betaine transporter RC1298 1202401 - 1202198 - | putative lysozyme RC1299 1202748 - 1202584 - | hypothetical protein RC1300 1202982 - 1202779 - | hypothetical protein TERM 1071 1203502 - 1203476 - g 74 -9.6 -2.62184 | opp_overlap 1203473 1203476 TTCTTCTTCACATCA GGCTTTACTT AGTTTTA AAGTAAAGCC TAATTCTAAACAAAA TERM 1072 1203476 - 1203502 + G 75 -9.6 -2.82623 | opp_overlap 1203476, overlap 1203473 TTCTTCTTCACATCA GGCTTTACTT AGTTTTA AAGTAAAGCC TAATTCTAAACAAAA RC1301 1203438 - 1203755 + | hypothetical protein TERM 1073 1203962 - 1203983 + G 93 -8.9 -4.83169 | AATTTAATGATTCAC TCTCTTTAT AGTA ATAAAGAGA TTTTTATGAGGGAGT TERM 1074 1204139 - 1204123 - g 70 -8.1 -3.09058 | overlap 1204111 1204109 1204122 1204125 AGATCACAGACAAAT CATTATC CGT GATAATG GCATCGGCATGAATA htpG 1203899 - 1205764 + | heat shock protein 90 TERM 1075 1205934 - 1205908 - g 78 -5.9 -4.81852 | gap 1, opp_overlap 1205931, overlap 1205912 TTATAATTAATAAAA TG-GATTCCCGC CTAC GCGGGAATGACA TCGAGAAAATGTCTT TERM 1076 1205929 - 1205912 - g 86 -11.3 -2.86514 | overlap 1205908 AATTAATAAAATGGA TTCCCGC CTAC GCGGGAA TGACATCGAGAAAAT hemA 1205907 - 1207187 + | 5-aminolevulinate synthase TERM 1077 1207318 - 1207302 - f 81 -8.1 -4.11216 | overlap 1207305 CCGTCATTGCGAAAA GAATTAC GTA GTAATTC GACGAAGCAATTCAG TERM 1078 1207355 - 1207341 - f 75 -4.3 -5.18357 | opp_overlap 1207334 1207341 CAATTCAGTAAAAAA TTCTG TACAT CAGAA TTTTTTTAATTATTT TERM 1079 1207341 - 1207355 + F 88 -4.3 -5.73672 | opp_overlap 1207341, overlap 1207334 CAATTCAGTAAAAAA TTCTG TACAT CAGAA TTTTTTTAATTATTT TERM 1080 1207656 - 1207635 - f 77 -4.5 -5.20154 | opp_overlap 1207635 1207637 1207646 ATATAATTTAAAAAA TAGTTGTAT TTTT ATACCACTA TAATATTAATTTTTT RC1304 1208123 - 1208446 + | hypothetical protein RC1305 1208488 - 1208682 + | hypothetical protein TERM 1081 1208986 - 1209000 + G 87 -10 -3.85389 | TAGCAGGTTTTAGAG CCGGTA AAG TACCGG TTTCAATTGTTAAGA TERM 1082 1209538 - 1209512 - g 77 -7.5 -4.07885 | gap 1 TACTTTTCCTGAAAA TTACCATGCTAA AGAT TTAGCA-GGTAA GGATGCTCGTTTTGT TERM 1083 1209580 - 1209567 - g 74 -6.7 -4.16182 | GTAGTACAAATTAAA GCAGT ACAT ACTGC AGAACCTACCGTTAT tig 1208850 - 1210187 + | trigger factor obgE 1211283 - 1210291 - | GTPase ObgE gltA 1212699 - 1211392 - | type II citrate synthase TERM 1084 1212993 - 1213027 + rH 87 -11.6 -3.00404 | opp_overlap 1213000 1213017, overlap 1212993 1212991 TTGCAACCTCCTCTT GCTATAATGGCTTCTT TTA AAATAGCCATTATAGC TCATTATTATGATCT RC1309 1214218 - 1213379 - | N-terminus of bacteriophage-type DNA polymerase TERM 1085 1214406 - 1214395 - gH 70 -4.4 -4.74706 | CTGAAGAGCTAAAAA TTGC AGCA GCAA ATGTAGCACTTGATA sfhB 1214181 - 1215122 + | pseudouridylate synthase TERM 1086 1215164 - 1215132 - fH 85 -8.1 -4.49337 | opp_overlap 1215132 1215150 TTATAATTGACAAAA TATTAATCCTTAATA TTA TATTAAAAATTAATA TTTATTTATAAAATG RC1311 1215672 - 1215947 + | hypothetical protein TERM 1087 1216273 - 1216248 - gf 72 -6.3 -4.27001 | CAACAAAAAATATAA CTCATATTATT ATTA AAGAATATGAG AAAAAACAAATTTTA RC1312 1215866 - 1216543 + | hypothetical protein RC1313 1216572 - 1216757 + | hypothetical protein trmB 1216766 - 1218340 + | bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase RC1315 1219244 - 1218306 - | hypothetical protein glyS 1221235 - 1219241 - | glycyl-tRNA synthetase subunit beta TERM 1088 1220438 - 1220409 - G 75 -2.4 -5.5454 | gap 2, overlap 1220412 TCAAATAAACAAAAA TATTTC-T-GATGC GTAC GCATCGAAGAAATA AGTACTTCTTTAGGT glyQ 1222098 - 1221232 - | glycyl-tRNA synthetase subunit alpha RC1318 1222537 - 1222130 - | putative plasmid stability protein RC1319 1222779 - 1222534 - | hypothetical protein RC1320 1223495 - 1222866 - | hypothetical protein TERM 1089 1223392 - 1223378 - G 79 -2.8 -5.74122 | GATTATAGAAAAAAA GCATAA ACT TAATGC CGGTATCGATCATTT RC1321 1223988 - 1223497 - | putative proline/betaine transporter RC1322 1224567 - 1224109 - | putative proline/betaine transporter TERM 1090 1224518 - 1224504 - GR 70 -5.6 -4.22883 | overlap 1224506 TATTACCGAAAATAA TACCGC CGA GCGGTC GTACTACAAAGCCTG TERM 1091 1224516 - 1224506 - GR 75 -8.2 -3.70622 | overlap 1224504 TTACCGAAAATAATA CCGC CGA GCGG TCGTACTACAAAGCC RC1323 1224679 - 1224491 - | putative proline/betaine transporter TERM 1092 1224836 - 1224822 - R 88 -4.3 -5.73672 | opp_overlap 1224822 AAATAATTAAAAAAA TTCTG ATTTA CAGAA TTTTTACTGGATTGC TERM 1093 1224858 - 1224874 + r 81 -8.1 -4.11692 | opp_overlap 1224864, overlap 1224861 CTGGATTGCTTCGTC GAATTAC TGC GTAATTC TTTTCGCAATGAATA RC1324 1225844 - 1224894 - | hypothetical protein RC1325 1226489 - 1225854 - | hypothetical protein TERM 1094 1226518 - 1226568 + r 78 -6.3 -4.78237 | gap 1, overlap 1226514 1226522 1226524 1226525 GGTTATTAGTGCCAT TG-CATGGTTTATGTCATTCCCGC CTAC GCGGGAATGACATGGAATATTACG TTTTATTATCAACTA TERM 1095 1226522 - 1226563 + r 100 -13.9 -3.4724 | overlap 1226514 1226518 1226524 1226525 ATTAGTGCCATTGCA TGGTTTATGTCATTCCCGC CTAC GCGGGAATGACATGGAATA TTACGTTTTATTATC TERM 1096 1226524 - 1226561 + r 100 -14.3 -3.28907 | overlap 1226522 1226518 1226525 TAGTGCCATTGCATG GTTTATGTCATTCCCGC CTAC GCGGGAATGACATGGAA TATTACGTTTTATTA TERM 1097 1226525 - 1226560 + r 100 -17.8 -2.5626 | overlap 1226524 1226522 1226518 AGTGCCATTGCATGG TTTATGTCATTCCCGC CTAC GCGGGAATGACATGGA ATATTACGTTTTATT RC1326 1228135 - 1226564 - | hypothetical protein TERM 1098 1228032 - 1228053 + g 71 -3.1 -5.1417 | overlap 1228034 AGTAACACCACAATC TTTTTTCTT TTGA AAGAAAATA TTTTTAATTTTGTAG TERM 1099 1230107 - 1230117 + G 71 -6.8 -3.98804 | CAAAAAGGTTCGTTA GTCG CTC CGAC TTATTTACGCTTTGA alaS 1228334 - 1230970 + | alanyl-tRNA synthetase truA 1231916 - 1231179 - | tRNA pseudouridine synthase A TERM 1100 1231930 - 1231954 + r 81 -10 -3.48276 | overlap 1231932 ATAATAGCCCACTGT CATCCCGTGG CTTGA CCACGGGATC TTGTATCACAGCCCG TERM 1101 1231932 - 1231952 + r 100 -12.6 -3.31726 | overlap 1231930 AATAGCCCACTGTCA TCCCGTGG CTTGA CCACGGGA TCTTGTATCACAGCC rpoD 1233916 - 1232012 - | RNA polymerase sigma factor RpoD TERM 1102 1233140 - 1233163 + g 71 -2 -5.36314 | gap 1, opp_overlap 1233146, overlap 1233143 TTCCGAAACTTCATT TATTAATAATT CCA AATTATTA-TA TTTTTTGCTATTTTG TERM 1103 1233143 - 1233161 + g 70 -6.2 -4.27753 | opp_overlap 1233146, overlap 1233140 CGAAACTTCATTTAT TAATAATT CCA AATTATTA TATTTTTTGCTATTT dnaG 1235748 - 1233961 - | DNA primase TERM 1104 1235610 - 1235584 - G 74 -3.8 -5.25799 | AAAACAATAGAAAAA TCTCTTACTATT ACT AACCGTAAAAGA TGGGGTCTTTTCTTG RC1331 1236367 - 1235753 - | hypothetical protein greA 1236496 - 1237116 + | transcription elongation factor GreA pntAB 1237673 - 1237275 - | NAD(p) transhydrogenase subunit alpha pntAA 1238794 - 1237670 - | NAD(P) transhydrogenase subunit alpha TERM 1105 1238159 - 1238147 - G 74 -6.3 -4.41348 | opp_overlap 1238146 1238147 TTCCGGTGAAACAAA CTTAG CTC CTAAG CTTTCTACCTGCTCT RC1335 1238870 - 1239508 + | hypothetical protein TERM 1106 1239861 - 1239882 + G 74 -7.3 -4.11371 | opp_overlap 1239861 1239860 1239863 TATACTATTTTAAAC GATAGGCTC GCCG GAGGCTATC TTTTAACAGGTATTA dnaX 1239738 - 1241267 + | DNA polymerase III subunits gamma and tau RC1337 1241287 - 1241610 + | hypothetical protein RC1338 1242275 - 1242081 - | hypothetical protein RC1339 1243168 - 1242473 - | hypothetical protein TERM 1107 1242821 - 1242801 - G 70 -3.9 -4.99035 | opp_overlap 1242802, overlap 1242802 GCATTGATATAAAAA TGCCCGT CTCTGTT ACGGGCT ATAATAATTTCTCCG TERM 1108 1242820 - 1242802 - G 70 -7.4 -3.58698 | opp_overlap 1242802, overlap 1242801 CATTGATATAAAAAT GCCCGT CTCTGTT ACGGGC TATAATAATTTCTCC RC1340 1243770 - 1243468 - | hypothetical protein TERM 1109 1243869 - 1243882 + r 71 -2.4 -5.40474 | overlap 1243879 CATTGCCCGGGTTTA CAAC TAGCTT GTTG TTTTTTTAGCAACGT TERM 1110 1244044 - 1244054 + r 72 -6.8 -4.08216 | opp_overlap 1244032 1244051 AATGCAATTGCCGTT GCTG AAA CAGC TTTTGAAACCGATGC TERM 1111 1244737 - 1244771 + r 72 -5.3 -4.84918 | gap 1, opp_overlap 1244742, overlap 1244738 TTTTAAGTTCATTGA GGATA-CCTATAATTA ATAC TAATTATAGGCTATCA TTTTATCTTTATCAA TERM 1112 1244738 - 1244770 + r 76 -8.8 -3.49866 | gap 1, opp_overlap 1244742, overlap 1244737 TTTAAGTTCATTGAG GATA-CCTATAATTA ATAC TAATTATAGGCTATC ATTTTATCTTTATCA TERM 1113 1244765 - 1244742 - R 76 -9.8 -2.80935 | opp_overlap 1244738 1244737 AGTTCATTGAGGATA CCTATAATTA ATAC TAATTATAGG CTATCATTTTATCTT glnQ 1245514 - 1244792 - | glutamine ABC transporter ATP-binding protein phnP 1246282 - 1245518 - | PhnP protein RC1343 1246297 - 1246944 + | hypothetical protein dinJ 1247038 - 1247301 + | DNA-damage-inducible protein J TERM 1114 1247867 - 1247887 + G 86 -11.3 -2.75311 | overlap 1247863 TATTTATTCTGTTAC CGGTAATAA TGG TTATTACCG TGATCTATATCTATA RC1345 1247620 - 1248756 + | hypothetical protein RC1346 1249226 - 1248762 - | DNA polymerase III subunit chi TERM 1115 1249224 - 1249238 + g 74 -5.8 -4.72201 | AATACTAAATTGCTG CATAAA AAT TTTATG TTATTTTTTATGAGA TERM 1116 1249393 - 1249430 + r 82 -10.7 -2.64144 | overlap 1249387 1249392 1249390 GCCTTGTTGCATGGG TTCTATGTCATTCCTGC CTCT GCGGGAATGACATCAAA GTATTTCCATCAAAA dapE 1250574 - 1249426 - | succinyl-diaminopimelate desuccinylase RC1348 1251225 - 1250575 - | putative type I restriction enzyme S subunit RC1349 1251538 - 1251338 - | hypothetical protein RC1350 1252038 - 1251643 - | putative type I restriction enzyme M subunit RC1351 1252160 - 1251984 - | hypothetical protein RC1352 1252747 - 1252457 - | hypothetical protein RC1353 1253236 - 1253006 - | hypothetical protein RC1354 1253546 - 1253743 + | putative Na(+)/H(+) antiporter RC1355 1253795 - 1254235 + | putative Na(+)/H(+) antiporter RC1356 1254840 - 1254325 - | hypothetical protein lipB 1255466 - 1254837 - | lipoyltransferase ampD 1256206 - 1255463 - | N-acetylmuramoyl-L-alanine amidase TERM 1117 1256321 - 1256305 - R 72 -8.1 -3.31144 | overlap 1256308 TCGTCATTGCGAGAA GAATTAC ACA GTAATTC GACGAAGCAATTTCA TERM 1118 1256636 - 1256616 - R 86 -9.7 -3.82097 | GTCAAATTTACTAAA TCCCGCAAT CAA ATAGCGGGA GATGACAGGGGCTGA rpsP 1257038 - 1256703 - | 30S ribosomal protein S16 rpmG 1257225 - 1257055 - | 50S ribosomal protein L33 TERM 1119 1257403 - 1257359 - R 74 -7.9 -3.73647 | opp_overlap 1257352 1257362 GCGAGCGACTAATAA GGAGCGTGGCAATCTAG TTTTAATTTCC CAAGATTGCCGCACTCC TTGCAGTTGTTCGCA mutL 1259279 - 1257447 - | DNA mismatch repair protein RC1362 1259440 - 1259276 - | hypothetical protein TERM 1120 1259765 - 1259739 - H 74 -6.1 -4.39166 | gap 1, overlap 1259733 1259741 CTTGAGATAGCAAAA CATTTTGCAAAA ACGG TTTTGCAAAA-G AAGATGAAGTAGCCA TERM 1121 1259764 - 1259741 - H 86 -9.8 -3.79993 | overlap 1259733 1259739 TGAGATAGCAAAACA TTTTGCAAAA ACGG TTTTGCAAAA GAAGATGAAGTAGCC RC1363 1259795 - 1259995 + | putative oxidoreductase TERM 1122 1260248 - 1260234 - g 82 -8.6 -4.01419 | TAGTAAGGAATCAAA TAGCAG ATA CTGCTA AAGCTAGACATATCA RC1364 1260164 - 1260424 + | putative oxidoreductase RC1365 1260842 - 1261066 + | hypothetical protein TERM 1123 1261332 - 1261359 + T 95 -11.6 -3.76815 | opp_overlap 1261335, overlap 1261335 TTAATATGTACGTTA TAATAGTCATAA TAAA TTATGACTATTA TTTAGCCTTTTGCAT TERM 1124 1261356 - 1261335 - T 74 -8.9 -3.33671 | opp_overlap 1261332 1261335 ATATGTACGTTATAA TAGTCATAA TAAA TTATGACTA TTATTTAGCCTTTTG TERM 1125 1261335 - 1261356 + T 82 -8.9 -4.00411 | opp_overlap 1261335, overlap 1261332 ATATGTACGTTATAA TAGTCATAA TAAA TTATGACTA TTATTTAGCCTTTTG RC1366 1261965 - 1261666 - | putative O-linked GlcNAc transferase RC1367 1262206 - 1261931 - | putative O-linked GlcNAc transferase proP7 1262300 - 1263574 + | proline/betaine transporter TERM 1126 1264003 - 1263986 - g 100 -7.1 -5.42259 | TTATCCGGAAAAAAA TGAAACT GTAA AGTTTCA TGCAGCTTTTAAAGA hemF 1263558 - 1264397 + | coproporphyrinogen III oxidase TERM 1127 1264415 - 1264439 + T 91 -11.5 -3.09135 | opp_overlap 1264415, overlap 1264421 TTTTTAAAATCATAA CCGGAATGGCA AAA TGCTATTTCGG TGTGTTGAAACTTCT TERM 1128 1264528 - 1264540 + T 81 -3.5 -5.55855 | CATTGAATTAGGTGA TATTT AAG AAATA TTTTATTTTTTTAAG RC1370 1264859 - 1264653 - | hypothetical protein RC1371 1265273 - 1264899 - | hypothetical protein RC1372 1266311 - 1265874 - | putative integral membrane protein hemH 1267363 - 1266323 - | ferrochelatase TERM 1129 1266802 - 1266826 + gr 74 -2.9 -5.38326 | opp_overlap 1266803, overlap 1266795 1266803 CGTGAGCAGAAAATA ATATACGAAAA TTT TTATCGTATAG TTTTTCTTTAATTAA TERM 1130 1266825 - 1266803 - GR 74 -6.4 -4.35042 | opp_overlap 1266802 1266795 1266803 GTGAGCAGAAAATAA TATACGAAAA TTT TTATCGTATA GTTTTTCTTTAATTA hemE 1268360 - 1267320 - | uroporphyrinogen decarboxylase TERM 1131 1267660 - 1267679 + g 74 -5.8 -4.71222 | opp_overlap 1267660 1267663 GGAAAAGCAATTATA GGAGTTTT TGGA AAAACTTC TTTTACTTTTAGTAT TERM 1132 1267866 - 1267877 + g 71 -3 -5.25656 | AGCAAGTATTTTATT TTCA TATA TGAA TTTTTTGCTCGTTTT TERM 1133 1268085 - 1268097 + g 72 -4.9 -4.88918 | TTTGAATTGCTTTAA TATAG GCC CTATA TTTTCTTTAAAATCC