TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.464342 %AT, 3903800 nt, 37856 terms. Intergenic: 0.548103 %AT, H2T: 509346 nt, 4802 terms; T2T: 142003 nt, 3148 terms; H2H: 212149 nt, 3227 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|207855516|ref|NC_011294.1| Salmonella enterica subsp. enterica serovar Enteritidis str. P125109, complete genome (length 4685848) TERM 1 1092 - 1115 + G 71 -11 -2.87132 | AAGGGATGATTGGGA TGGCGGCG CGTGTTTT CGCCGCCA TGTCTCGCGCCGGGA TERM 2 1390 - 1410 + G 70 -9.7 -3.36096 | overlap 1387 1383 CAATATCGTGGCGAT CGCTCAGGG ATC TTCTGAGCG TTCCATTTCTGTGGT thrA 101 - 2563 + | aspartokinase I/homoserine dehydrogenase I thrB 2565 - 3494 + | homoserine kinase thrC 3498 - 4784 + | threonine synthase yaaA 5651 - 4878 - | hypothetical protein TERM 3 5016 - 5002 - G 72 -2.1 -4.89477 | gap 1 TTTTCAATAATAAAA CGG-CT CATC AGTCCG CGCGCTTTTTTGGCG yaaJ 7160 - 5730 - | putative amino-acid transport protein talB 7429 - 8382 + | transaldolase B mog 8493 - 9083 + | molybdopterin biosynthesis Mog protein yaaH 9706 - 9140 - | integral membrane protein TERM 4 9632 - 9618 - G 82 -5.6 -5.03314 | TCCAGGGCGAAAAAA CCGGCA TTG TGCAGG TTAAGCAGAATGGTG TERM 5 9844 - 9821 - R 72 -8.2 -3.69395 | overlap 9830 9838 TCTATGATCTAATAA GGGGGAAA AGAAAATA TTTCCCCC AGTGAGGGCATTCAC htgA 10569 - 9856 - | hypothetical protein yaaI 11009 - 10605 - | possible exported protein TERM 6 11663 - 11635 - g 70 -5.2 -4.37886 | gap 1, opp_overlap 11635 11634 11638, overlap 11636 11639 TCATGCCGTACAAAA TCAT-CGGCGCCG ACAA CGGCGACGCATGG CTTGATGTGAAAGGT dnaK 11358 - 13274 + | DnaK protein (heat shock protein 70) TERM 7 13296 - 13272 - f 83 -2.1 -5.63645 | opp_overlap 13278 13295, overlap 13276 GTAAAAGATAAAAAA TAATCGCCCTT TGA ACGGGTAATTA CTGGCACGGGCGAAG TERM 8 13295 - 13337 + F 80 -12.6 -3.01924 | opp_overlap 13272 13297, overlap 13303 CTTTGAACGGGTAAT TACTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATGCA TGTTAAGGGCAGATA TERM 9 13335 - 13297 - f 90 -15.2 -2.73542 | opp_overlap 13295 13303 TTGAACGGGTAATTA CTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATG CATGTTAAGGGCAGA TERM 10 13303 - 13329 + F 100 -18 -2.9518 | opp_overlap 13297, overlap 13295 GGGTAATTACTGGCA CGGGCGAAGAGG TTT CCTCTCCGCCCG TGTATGCATGTTAAG TERM 11 13441 - 13428 - g 82 -5.2 -4.98531 | GCGTGAAATCAAAAA GGCG TATAAG CGCC TGGCCATGAAATATC dnaJ 13360 - 14499 + | DnaJ protein TERM 12 14526 - 14545 + F 100 -11.4 -5.29782 | TTGTATTTTTCTTCA GCCCGGGT GTAT ATCCGGGC TTTTTTCTGCCTGTA TERM 13 15608 - 15635 + G 83 -10.6 -3.93695 | opp_overlap 15597 TTTATTCAGCCTCCG CCCGAACTGGCT TTGA AGTCAGTTCAGG TTTATGCATCCTGGA SEN0013 14780 - 15727 + | putative regulatory protein SEN0014 15854 - 16198 + | hypothetical protein TERM 14 16217 - 16232 + T 79 -9 -4.16146 | TCATTTGCAGTATCA GGCTCA TCCG TGAGCC TTTTACGCGTCTTTT SEN0015 16792 - 16259 - | hypothetical protein SEN0016 17252 - 16809 - | hypothetical protein TERM 15 17504 - 17515 + H 72 -3 -5.02502 | ACGGTGTTGTTAACC TCAT TTTT ATGA TTTTTATATCATCTA TERM 16 17522 - 17541 + H 74 -5.8 -4.55491 | overlap 17524 TTTTTATGATTTTTA TATCATCT AAAA AGATGATG TTTTGTGATTAGCTA SEN0017 17633 - 19732 + | putative chitinase TERM 17 19773 - 19790 + F 100 -14.1 -4.36914 | opp_overlap 19773 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 18 19790 - 19773 - f 85 -14.1 -3.09516 | opp_overlap 19773 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 19 22608 - 22625 + G 75 -6.3 -4.66163 | gap 1 AGCGCGACTTACGGC GTC-CCGA CCG TCGGCGAC TTTTTACGTAAAGAT SEN0018 19824 - 22820 + | putative chitinase TERM 20 22859 - 22888 + F 95 -11.6 -4.25104 | CTGGACTATTAGTTT GAGATTCGAAGG CGCGTT CTTTCGAATCTC TTTTCCTGCGCCCCC SEN0019 23101 - 23805 + | hypothetical protein bcfA 24235 - 24777 + | fimbrial subunit TERM 21 24772 - 24790 + F 89 -5.3 -5.69473 | overlap 24786 TTTAGCATGGTTTAT TCCTGAT TCCTT ATCGGGA TTTTTTTCTCGTCTG TERM 22 24854 - 24821 - f 77 -8.8 -3.89346 | TTGGGAGGCGAGAAA GGGGCGTTACGCGC GTCACT GCGCGTAACAAACC GACGGCATCAGGATA TERM 23 25329 - 25312 - g 78 -6.9 -4.57073 | overlap 25313 TATCCGCCCGAAAAA TCTGGCG GAGG CGCCAGC TCATGCCCCGTCGAC TERM 24 25328 - 25313 - g 73 -10.4 -3.33922 | overlap 25312 ATCCGCCCGAAAAAT CTGGCG GAGG CGCCAG CTCATGCCCCGTCGA bcfB 24878 - 25564 + | fimbrial chaperone TERM 25 27325 - 27309 - g 87 -8 -4.60292 | TACAACAATAACAAA TCCGCA GGCGA TGCGGA GCGCGATCAAATTTT bcfC 25569 - 28190 + | fimbrial usher protein TERM 26 29148 - 29134 - g 77 -11.4 -3.51032 | opp_overlap 29143, overlap 29143 ACCCGGTAAGTACAA CAGGCG AAA CGCCTG CGGAAGGGGCGTTTA bcfD 28191 - 29198 + | fimbrial subunit bcfF 29199 - 29744 + | fimbrial subunit bcfG 29760 - 30278 + | fimbrial subunit TERM 27 30499 - 30477 - gf 100 -10.6 -4.90266 | opp_overlap 30481, overlap 30489 GCCAGGAACCAAAAA CGAAGGGAAT ATC ATGCCCTTCG TGGTCACGCCGCCAT bcfH 30244 - 30975 + | fimbrial chaperone TERM 28 30989 - 31008 + F 82 -11.4 -3.58533 | AACTTTTTTTCAGGC GTCTCCCG ATAG CGGGAGGC TTTCCGAACTTATCG TERM 29 31453 - 31464 + G 83 -7.2 -4.64861 | CTGATTAAGGCGAAC CCGG ATAC CCGG TTTATTTTCAAAGAG bcfH 31039 - 31884 + | hypothetical protein SEN0028 31881 - 32210 + | hypothetical protein SEN0029 32759 - 32310 - | hypothetical protein TERM 30 33387 - 33377 - g 70 -6.8 -4.09108 | overlap 33378 TTGAATCTATAGAAA GCAC ACT GTGC GATAAAACAGATGCT TERM 31 34044 - 34027 - g 79 -2.7 -5.16472 | AAAAATGCCAAAAAA CTGATAT CAAC ATTTCAG TCGACCTTTCTTTTT SEN0030 33121 - 34125 + | putative transcriptional regulator (lysR family) SEN0031 34573 - 34133 - | hypothetical protein TERM 32 34317 - 34304 - G 90 -4.5 -5.41143 | overlap 34305 34306 CACCGTGGAAAAAAA CTGGC TCAG GCCAA AGCCTTTAAGGTCGC TERM 33 34703 - 34719 + H 81 -3.8 -5.3104 | opp_overlap 34699 34714, overlap 34714 ACAAAAATGATGTTT TTTTAG AAAAA CTAAAA TTTTATTTTTAGTCG TERM 34 34754 - 34714 - H 82 -7.2 -4.82901 | opp_overlap 34703 34714, overlap 34720 GTTTTTTTAGAAAAA CTAAAATTTTATTTTTAG TCGCT CTAAAAATAAAATGATAG TAGTGTTAATTTTTA TERM 35 34748 - 34720 - H 93 -9.2 -4.82678 | opp_overlap 34714, overlap 34714 TTAGAAAAACTAAAA TTTTATTTTTAG TCGCT CTAAAAATAAAA TGATAGTAGTGTTAA SEN0032 35096 - 36814 + | possible sulfatase TERM 36 36855 - 36819 - T 77 -10.2 -3.44146 | opp_overlap 36803 36814 36812 36822, overlap 36822 TGTTTGCATAACTAA GTATGTTATGCGGCCG GTTAT CGACCGCATAACATTA TGGCTTATTTGCTAA TERM 37 36822 - 36852 + T 95 -14.8 -3.49938 | opp_overlap 36822 36819, overlap 36803 36814 36812 TTGCATAACTAAGTA TGTTATGCGGCCGG TTA TCGACCGCATAACA TTATGGCTTATTTGC TERM 38 36852 - 36822 - T 93 -16.3 -2.87274 | opp_overlap 36803 36814 36812 36822, overlap 36819 TTGCATAACTAAGTA TGTTATGCGGCCG GTTAT CGACCGCATAACA TTATGGCTTATTTGC SEN0033 38431 - 36860 - | putative secreted 5'-nucleotidase TERM 39 38495 - 38457 - R 83 -4.5 -5.35815 | overlap 38460 38461 TACATTAAAGAAAAA CAATGCCTGTAGTCGTG TCATT CACGACTACAAACCGGG GAAATTAAGTAATAT TERM 40 38492 - 38460 - R 93 -9.2 -4.74052 | overlap 38457 38461 ATTAAAGAAAAACAA TGCCTGTAGTCGTG TCATT CACGACTACAAACC GGGGAAATTAAGTAA TERM 41 38491 - 38461 - R 85 -12.7 -3.41991 | overlap 38460 38457 TTAAAGAAAAACAAT GCCTGTAGTCGTG TCATT CACGACTACAAAC CGGGGAAATTAAGTA SEN0034 39291 - 38530 - | hypothetical protein SEN0035 39885 - 41378 + | putative secreted sulfatase TERM 42 41422 - 41457 + F 100 -11.2 -4.86731 | gap 1, overlap 41425 CACTTAGGGCGATGC CCACCTGATCCGGTCAC TCT GTG-CCGGATCAGGTTC TTTTATTTCAGGGAA TERM 43 41425 - 41454 + F 100 -17.3 -4.54026 | gap 1, overlap 41422 TTAGGGCGATGCCCA CCTGATCCGGTCAC TCT GTG-CCGGATCAGG TTCTTTTATTTCAGG TERM 44 42256 - 42301 + G 85 -13.1 -3.60296 | opp_overlap 42235 42237, overlap 42250 42256 42264 GGCGGCCTGGTGCGG CCTGCCGCCGCAGGTTTGCGT TTTT GCGCCCACCTGCGGCAGCGCG TTTGCGATGGAAATG TERM 45 42256 - 42269 + G 74 -8.1 -3.99805 | opp_overlap 42235 42237, overlap 42250 42256 42264 GGCGGCCTGGTGCGG CCTGC CGCC GCAGG TTTGCGTTTTTGCGC TERM 46 42264 - 42275 + G 75 -5.8 -4.56775 | opp_overlap 42237, overlap 42250 42256 42256 GGTGCGGCCTGCCGC CGCA GGTT TGCG TTTTTGCGCCCACCT SEN0036 41477 - 42667 + | possible sulfatase regulatory protein TERM 47 43124 - 43152 + G 70 -3 -4.78848 | GAATTACAAAAACTG TCCCGTCGCGCT AATCA AGCGGAACGCGA TTTTGTGTTTCCCGC TERM 48 43429 - 43439 + G 83 -8.2 -4.52589 | ATTTGATGTGGATTA CGGC CCC GCCG TTTTATATAAAAACG SEN0037 42686 - 43939 + | hypothetical protein TERM 49 44057 - 44002 - f 72 -4.9 -4.58395 | gap 2, opp_overlap 44001 44016 CGGACGGCTTAAAAA TCCAGAGTATTAATTTTCGTGGTCCCC ATGA GGGG-CGATGAG-ATTAATACACTGGA GATTTATCATGAATA TERM 50 44338 - 44328 - g 87 -8.2 -4.58663 | AGGATGCGGCAAAAA CGGC GAT GCCG GTAGAACATCTTTAC TERM 51 45563 - 45553 - g 74 -6.8 -4.2558 | opp_overlap 45553 CACGTTTGATGAAAA TGGC CGC GCCA TCTCTTGCCAGCCTG SEN0038 44066 - 45781 + | possible sulfatase TERM 52 45833 - 45816 - f 87 -6.9 -5.15634 | opp_overlap 45816 45812 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 53 45816 - 45833 + F 72 -9.1 -3.56704 | opp_overlap 45816, overlap 45812 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 54 46410 - 46448 + G 93 -13.3 -3.80174 | gap 1, overlap 46411 CGCTGAAAATTTTCC TGATGGCGCTGGCGATCA TCGA TGATC-TCGGCGCCATCG TTATTATCGCACTGT TERM 55 46411 - 46447 + G 86 -14.6 -2.87622 | gap 1, overlap 46410 GCTGAAAATTTTCCT GATGGCGCTGGCGATCA TCGA TGATC-TCGGCGCCATC GTTATTATCGCACTG nhaA 45944 - 47110 + | Na(+)/H(+) antiporter 1 TERM 56 47148 - 47127 - f 70 -10.1 -2.97743 | opp_overlap 47132, overlap 47126 CAGTACGAAGGAAAG GGGGAGCGA TGTA TCGCTCCCT TGCGACATTGAACAG TERM 57 47245 - 47259 + G 74 -4.9 -4.82901 | AAGGTTCTGTCGTGG GTGCC GCAGA GGCGC TTTTTCTGACGCCGC TERM 58 47877 - 47889 + G 70 -3.3 -4.82901 | overlap 47878 AAGGCGTTTGGCGCG ACGCA CGA TGCGA TTTTTGTGGCGCCGA nhaR 47172 - 48071 + | transcriptional activator protein NhaR TERM 59 48087 - 48123 + T 85 -12.3 -3.33261 | opp_overlap 48089 48108, overlap 48090 ACGTACCTACCGTAA TACTTCCGGCTGCGG TATTAAC CCGCAGCCGGAATCA TTCTACAAGTTCAGC TERM 60 48121 - 48089 - T 88 -14.9 -3.06492 | opp_overlap 48087 48090, overlap 48108 GTACCTACCGTAATA CTTCCGGCTGCGG TATTAAC CCGCAGCCGGAAT CATTCTACAAGTTCA TERM 61 48090 - 48120 + T 100 -18.4 -2.83747 | opp_overlap 48089 48108, overlap 48087 TACCTACCGTAATAC TTCCGGCTGCGG TATTAAC CCGCAGCCGGAA TCATTCTACAAGTTC SEN0041 50165 - 48126 - | putative glycosyl hydrolase TERM 62 49878 - 49892 + g 71 -7.8 -4.0641 | opp_overlap 49878 CCGCAGGCGCCAGAA CTCCTG CAA CAGGGG TTTGTGTGGATGGCG SEN0042 51578 - 50205 - | putative transport protein TERM 63 52002 - 51988 - R 100 -8.5 -5.64274 | opp_overlap 51988 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT TERM 64 51988 - 52002 + r 88 -8.5 -4.83169 | opp_overlap 51988 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT rpsT 52297 - 52034 - | 30S ribosomal protein S20 yaaY 52403 - 52618 + | hypothetical protein ribF 52626 - 53564 + | riboflavin biosynthesis protein RibF TERM 65 53775 - 53757 - g 89 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCATATGCGAA TERM 66 54827 - 54804 - g 76 -3 -5.03314 | opp_overlap 54808 54824 54826, overlap 54805 54806 54808 TGCATGTCGAAAAAA TGCAGCACAG CTAT CCGTGCTGTT GGCGTCACAAAACGC ileS 53609 - 56443 + | isoleucyl-tRNA synthetase TERM 67 56807 - 56819 + G 75 -6.3 -4.65895 | GGCACGGCTTTGTTG TCGAT ATG ATCGA TTTTTACGTCGGCAA lspA 56443 - 56943 + | lipoprotein signal peptidase TERM 68 56953 - 56971 + F 70 -5.2 -4.45485 | GCATAAGCGTAAATA CCGGGTGG CGC TTATCCGG TTTTGTAGGTCTGAT TERM 69 57008 - 57051 + F 70 -5.3 -4.52703 | gap 2, opp_overlap 56990 56989 57009, overlap 57009 57049 AGCGCCATCAGGCAA ACGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACGG TTTTATCGTCCTTTG TERM 70 57009 - 57050 + F 70 -8.8 -3.30538 | gap 2, opp_overlap 56990 56989 57009, overlap 57008 57049 GCGCCATCAGGCAAA CGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACG GTTTTATCGTCCTTT slpA 57098 - 57547 + | probable FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase lytB 57550 - 58500 + | LytB protein TERM 71 58639 - 58673 + F 77 -10.2 -3.4252 | opp_overlap 58647, overlap 58647 CTTTTTGCTATTCAT CTGAAAAACCAGCA CAATCGT TGCTGGTTTTTTGG TTGTAATGCCTACAG TERM 72 58647 - 58665 + F 85 -6 -5.33848 | opp_overlap 58647, overlap 58639 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTTGGTTGTAAT TERM 73 58665 - 58647 - f 74 -6 -4.62783 | opp_overlap 58647 58639 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTTGGTTGTAAT TERM 74 59523 - 59505 - f 72 -3.1 -4.98531 | GCTGGAAAGGAAAAA CGATTGA ACTGA TCGATCG CGGTGAAAGCTACTT TERM 75 60610 - 60660 + G 89 -8.9 -4.62336 | gap 1, overlap 60613 GTAGTATGCGCACTG GCGTCCGGATGCACGATCTCTGCG CTAT CGCCTGGCTGGTGCGTCCGGA-GC TTTTTACCCTGCAAT rihC 59919 - 60839 + | putative nucleoside hydrolase (IUNH family) SEN0053 61547 - 60861 - | transcriptional regulatory protein citb TERM 76 60899 - 60930 + g 79 -7.2 -4.40963 | TCTCCGGCCTGCCCA CTTTCCCGTAGCTG ATCT CCGCTTCGAGAAAG TTATTTTTCACGCCT TERM 77 61074 - 61099 + g 78 -6.8 -4.57581 | gap 1 GTTTTCATCAATTCC CCGCAG-TCCG CTATT CGGTTCTGCGG TTTGTTCTTTGGCCT TERM 78 61495 - 61475 - G 75 -6.1 -4.61527 | opp_overlap 61475 AAAACTGGGGAAAAA TCTTGATGG TGT CCACCAGGA TTTCCGCTAGCATCG SEN0054 63168 - 61549 - | sensor kinase TERM 79 62230 - 62245 + g 73 -10.4 -3.37796 | opp_overlap 62230 62229 GCGAAAGCTAATAAC CCAGCC CTGA GGCTGG TTGTCAATAATGACC TERM 80 62296 - 62310 + g 100 -2.1 -6.12458 | TTTCATTTGGTTAAA GGTGA CGATC TCATC TTTTTTGTTTTTTTG TERM 81 63295 - 63273 - R 95 -12.1 -4.27192 | opp_overlap 63268 AAATTTGGATGAAAA TGGGATACG ACATG CGTATCCCA TCCACTATTACATCG SEN0055 64604 - 63303 - | oxaloacetate decarboxylase beta chain (ec 4.1.1.3) SEN0056 66386 - 64617 - | oxaloacetate decarboxylase alpha chain (ec 4.1.1.3) TERM 82 65027 - 65043 + g 74 -7.2 -4.10453 | opp_overlap 65025 65026, overlap 65006 65025 GCAGTGGCTCAAACG CCGCCG GGTTG TGGCGG TTTTCGAGGAATTTG TERM 83 66139 - 66163 + g 74 -7.7 -4.1196 | opp_overlap 66125 CCGAGCAGGTTCTGG CCGCGCAGCAG CAT CTGCAGTGGGG TTTTGGGCATGGCTT SEN0057 66642 - 66403 - | oxaloacetate decarboxylase gamma chain (ec 4.1.1.3) TERM 84 66627 - 66601 - G 73 -5 -4.59773 | overlap 66603 66606 CCCCATCCCTAAAAA CATCAGGGTGAA ACC TTCACCCAGTAG TACAGCTTCATTCAT SEN0058 68141 - 66801 - | citrate-sodium symporter TERM 85 67583 - 67567 - G 72 -11.5 -3.01708 | overlap 67556 TAAATTTCAGACAGA GGCACGG CGC CCGCGCC GTTACCACCGCCCAT TERM 86 68241 - 68255 + H 79 -4.4 -5.12068 | GAATGGTTGTGTTTT TAATTA ATT TAATTA TTTTTATTAACTCTG TERM 87 68845 - 68831 - g 71 -4.2 -4.62471 | overlap 68832 GTCAACCGGGAAAAA CGATCG GCG CCATCG TCATGAACGCCAATC TERM 88 69146 - 69164 + G 73 -5.9 -4.37886 | AACATCTGGCTCCAG CGCTGGG GATTA CCCATCG TTTTGTCGGCAGTGA citC2 68386 - 69429 + | [citrate (PRO-3S)-lyase] ligase citD2 69459 - 69752 + | citrate lyase acyl carrier protein TERM 89 70269 - 70305 + G 76 -12.2 -3.03771 | gap 1 CCGAGCTGTTCTACG CCCGCTGCGCAGTGCTG CATG CGGCGC-GCGTTGCGGG TATTGCCGCCTATGA citE2 69749 - 70618 + | citrate lyase beta chain citF2 70629 - 72149 + | citrate lyase alpha chain citX2 72149 - 72700 + | citx protein TERM 90 73016 - 73026 + G 75 -6.8 -4.4267 | opp_overlap 73012, overlap 73023 TGGTGTGAATACCCA TCGC GGG GCGA TTTTCGCTTTTGGCC TERM 91 73023 - 73033 + G 70 -6.8 -4.15565 | overlap 73016 AATACCCATCGCGGG GCGA TTT TCGC TTTTGGCCTGCTGAG citG2 72678 - 73586 + | citg protein TERM 92 73611 - 73642 + F 83 -8.8 -4.33274 | opp_overlap 73615, overlap 73613 73615 CTTTCATTCTCTCCA GCAATGATTCATCC TGCG GGATGAATCATGTC TTTTACTGATATCGC TERM 93 73613 - 73640 + F 79 -10 -3.76811 | opp_overlap 73615, overlap 73611 73615 TTCATTCTCTCCAGC AATGATTCATCC TGCG GGATGAATCATG TCTTTTACTGATATC TERM 94 73615 - 73638 + F 85 -12.6 -3.45743 | opp_overlap 73615, overlap 73613 73611 CATTCTCTCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA TERM 95 73638 - 73615 - f 81 -12.6 -3.14344 | opp_overlap 73615 73613 73611 CATTCTCTCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA dapB 73766 - 74587 + | dihydrodipicolinate reductase TERM 96 74642 - 74660 + F 100 -11.8 -5.26119 | opp_overlap 74642 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTGCCCC TERM 97 74660 - 74642 - f 95 -11.8 -3.99405 | opp_overlap 74642 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTGCCCC TERM 98 76524 - 76484 - g 80 -9.6 -3.92373 | gap 1, opp_overlap 76511 CATCGTACCGACAAA CCGGCGTTCAGCTTCCAGG GCCA CCCGGAGGC-GAGCCCCGG CCCGCACGATGCGGC TERM 99 76511 - 76555 + G 73 -9.2 -3.90729 | gap 2, opp_overlap 76484 TTCCAGGGCCACCCG GAGG-CGAGCCCCGGC-CCGCA CGA TGCGGCGCCGCTGTTCGACCAC TTTATCGAGCTTATT carA 75449 - 76597 + | carbamoyl-phosphate synthase small chain carB 76616 - 79843 + | carbamoyl-phosphate synthase large chain TERM 100 79916 - 79897 - f 79 -10.8 -3.63707 | opp_overlap 79897 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG TERM 101 79897 - 79916 + F 100 -10.8 -5.80817 | opp_overlap 79897 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG caiF 80117 - 80512 + | transcriptional activator CaiF caiE 81186 - 80590 - | carnitine operon protein CaiE TERM 102 80616 - 80640 + g 70 -9.9 -3.38324 | overlap 80616 ATTTTGGCTTCACGT CCGTCGTGCCT TTC AGGCGCGGCCG GTTTTCTTCGACCTG TERM 103 80616 - 80641 + g 91 -9.7 -4.64676 | gap 1, overlap 80616 ATTTTGGCTTCACGT CC-GTCGTGCCT TTC AGGCGCGGCCGG TTTTCTTCGACCTGC TERM 104 81271 - 81227 - R 73 -10.1 -3.34517 | opp_overlap 81217, overlap 81225 81228 ATGGCGGTGTAAACA CCTTATCCGGCCTACGG TTGCGCATGTG CTGTAGGCCGGATAAGC GAAGCGCCATCCGGC TERM 105 81270 - 81228 - R 83 -13.6 -2.60496 | overlap 81227 81225 TGGCGGTGTAAACAC CTTATCCGGCCTACGG TTGCGCATGTG CTGTAGGCCGGATAAG CGAAGCGCCATCCGG caiD 82081 - 81296 - | carnitine racemase TERM 106 81990 - 81972 - G 74 -3.1 -4.84642 | CGGAAATTAAGAAAA GCTTCAC CCATT GCAAAGC TGGTTTTGGCGTCAA TERM 107 82103 - 82133 + r 79 -7.5 -4.48743 | opp_overlap 82103, overlap 82104 82105 TCTCCAGATAAATAG TTTCCCGGCGGGA TGGAT TCCTGCCGGAAGG TTTATTTCAGATTTT caiC 83688 - 82135 - | probable crotonobetaine/carnitine-CoA ligase TERM 108 83713 - 83749 + r 100 -13.8 -3.79519 | gap 1, opp_overlap 83708 TCCACTGAAATCAGG CGTGA-GCGCTAACCGG AAAA CCGATTAGCGCATCGCG TTTAATCCTCAACTT caiB 84968 - 83751 - | L-carnitine dehydratase TERM 109 84853 - 84898 + g 80 -10.3 -3.78329 | opp_overlap 84852 84851 TCAATCCAGATAACC TCGGCGCCCCATTCGGCGAAC ATCT GTCCGGCGAATGGACCGGCGA TTTCGATTCCTGAAA TERM 110 85050 - 85011 - R 77 -10.6 -3.30243 | opp_overlap 85043 85044, overlap 85014 85016 ATGTAGGCCGGATAA GCACAGCGCCATCCGGCA TGAT TGCCTGATGGCGACGCCC CGCGTCTTATCAGGC TERM 111 85047 - 85014 - R 82 -13.1 -2.8294 | opp_overlap 85043 85044, overlap 85011 85016 TAGGCCGGATAAGCA CAGCGCCATCCGGCA TGAT TGCCTGATGGCGACG CCCCGCGTCTTATCA TERM 112 85045 - 85016 - R 78 -12.1 -2.96274 | opp_overlap 85043 85044, overlap 85014 85011 GGCCGGATAAGCACA GCGCCATCCGGCA TGAT TGCCTGATGGCGA CGCCCCGCGTCTTAT TERM 113 85044 - 85056 + r 70 -9.1 -3.30124 | opp_overlap 85016 85014 85011, overlap 85043 TGATTGCCTGATGGC GACGC CCC GCGTC TTATCAGGCCTACAA caiA 86222 - 85080 - | probable carnitine operon oxidoreductase CaiA caiT 87774 - 86257 - | probable carnitine transporter fixA 88255 - 89025 + | FixA protein fixB 89041 - 89982 + | FixB protein TERM 114 91263 - 91245 - g 95 -5.2 -5.42259 | overlap 91247 CGATGCGTAAAAAAA TCCTGCGC CAT GCGAAGAA AGTGGGCTTCATCAA fixC 90032 - 91318 + | FixC protein fixX 91333 - 91602 + | ferredoxin like protein FixX TERM 115 91698 - 91640 - f 78 -12.2 -2.52623 | opp_overlap 91640 91649 91688, overlap 91637 TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA TERM 116 91640 - 91698 + F 86 -14.4 -2.57931 | opp_overlap 91637 91640, overlap 91649 91688 TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA TERM 117 92039 - 92051 + G 70 -5.5 -4.41348 | opp_overlap 92020 TATCGGCGTTATCTC CGTGG CGA CCATG TTTGTTTCCACGCCG yaaU 91749 - 93089 + | putative metabolite transport protein SEN0081 93178 - 93408 + | putative lipoprotein SEN0083 93721 - 94116 + | probable secreted protein SEN0084 94630 - 94340 - | probable secreted protein TERM 118 95356 - 95346 - H 73 -4 -4.80077 | CTAAAATAAAAACAA TGAA CTT TTCA TCTAAATAATTTTTC TERM 119 95556 - 95545 - g 100 -4.4 -6.13503 | GAGTAATAAAAAAAA TCTG TCCG CAGA AGAGACGGATCTTAC TERM 120 97092 - 97038 - g 95 -2.8 -5.76237 | overlap 97057 GAGATAAACAAAAAA CGGTGGCGCAAATCAAGCAGGAAATA TCC CATTTGCATCCTGATTTTAGCCATCG TTCAGGGACGCGGAT SEN0085 95528 - 97417 + | putative sulfatase yabF 97824 - 98354 + | putative NAD(P)H oxidoreductase TERM 121 99308 - 99334 + G 95 -15.2 -3.38812 | opp_overlap 99316, overlap 99306 99315 GGCCGCTGGGCGTAC CGGCAAAACAGC GTC GCTGGTTTGCCG TCTTATTAGGCCAGG TERM 122 99326 - 99316 - g 70 -6.8 -4.11216 | opp_overlap 99315 99308 99306 GGCGTACCGGCAAAA CAGC GTC GCTG GTTTGCCGTCTTATT TERM 123 99437 - 99463 + G 80 -5.1 -4.93296 | gap 1, opp_overlap 99421, overlap 99450 99452 CGCTGACGCTGGCGG TC-GCGCTGTCG ATGG CGGCAACGCCGA TTTTTCTGGTGCTGC kefC 98347 - 100209 + | glutathione-regulated potassium-efflux system protein KefC folA 100408 - 100887 + | dihydrofolate reductase type I TERM 124 100892 - 100930 + T 82 -13.3 -3.02263 | gap 2, opp_overlap 100914 100915, overlap 100907 AACGTCGTTAACGCT GTAGTGCCGGATGGCGGCG AAA CGCC-TTATCCGGC-CTAC TCTTGAGCCAGATGT apaH 101841 - 100993 - | bis(5'-nucleosyl)-tetraphosphatase apaG 102229 - 101852 - | CorD protein ksgA 103053 - 102232 - | dimethyladenosine transferase pdxA 104039 - 103050 - | pyridoxal phosphate biosynthetic protein PdxA surA 105325 - 104039 - | survival protein SurA precursor TERM 125 104975 - 104932 - G 72 -11.2 -3.14564 | gap 1 TCATCTCTTTACGAA TCTGG-TTACGGTAGGTTGAA TAG TTCAGCCCATCGTAAGCCAGA CGGCTGCGCATCTGA imp 107739 - 105379 - | organic solvent tolerance protein precursor TERM 126 106021 - 106005 - G 71 -5.9 -4.23674 | TTTGACCAACAGAAA CGTTAAA ACG TTCAACG GCGGCATCATCATAA TERM 127 108023 - 108049 + G 77 -8.6 -4.10161 | opp_overlap 108016 AAGATAATTGGCGTC GCCGTAGCCC TGATGAT GGGCGGCGGC TTTTGGGGCGTGGTC TERM 128 108140 - 108151 + G 77 -3.6 -5.00616 | opp_overlap 108133 GCCAACCAGCGGGAA CGGC AGGC GCTG TTTTTTGCCACCACC djlA 107993 - 108805 + | DnaJ-like protein rluA 109559 - 108900 - | ribosomal large subunit pseudouridine synthase A TERM 129 109606 - 109594 - R 70 -9.1 -3.44051 | overlap 109597 GCGTGACGACGATAA GACGC AGC GCGTC CAGACGCCAGCCTGC hepA 112477 - 109571 - | probable ATP-dependent helicase HepA TERM 130 109918 - 109934 + g 75 -3.6 -4.96848 | overlap 109913 109912 109916 CAAACTCGACCTGGG CGGCCA GATTG TTGCCG TTTTTATCTAACAGC TERM 131 110038 - 110056 + g 85 -6.7 -4.85782 | gap 1, opp_overlap 110023 CCAGTTCGACCAGCA GCG-TGCC GACT GGCAGCGC TTTATTTTTCAACAG TERM 132 110426 - 110443 + g 70 -6.9 -4.15106 | overlap 110416 110419 110440 CAGCAGGCGGTCGCG GCCCTGT TCTA ACTGGGC TTTTAGCGCTTCATG TERM 133 111087 - 111102 + g 74 -7.5 -4.07568 | opp_overlap 111081, overlap 111081 111082 TAGAGCATATCGCGG GCGCG ATCTTC CGCGC TTTTACGCGCGCCCA polB 115002 - 112651 - | DNA polymerase II TERM 134 112854 - 112864 + g 81 -6.8 -4.71426 | overlap 112842 ACTGCGTCGGACGAC CCTG CTT CAGG TTTTGTTCATCCGCC SEN0100 115666 - 115046 - | probable secreted protein TERM 135 115530 - 115495 - G 89 -9 -4.56597 | overlap 115497 GTCTGGCCTGAAAAA CGGGAGAAGGCGTT TTTCCGCT AACGCCTGCTCCTG CGACAATCGCGCAGT TERM 136 115936 - 115955 + H 71 -3.7 -4.78981 | opp_overlap 115936 TATTTCTCGGATTAA CAAAAAA GCGATA TTTTTTG TTTGTTTTACTTAAT TERM 137 116596 - 116577 - g 83 -12.8 -3.20858 | opp_overlap 116577 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA TERM 138 116577 - 116596 + G 95 -10.6 -4.58283 | opp_overlap 116577 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA SEN0101 116184 - 116603 + | hypothetical protein araD 117304 - 116609 - | L-ribulose-5-phosphate 4-epimerase araA 118947 - 117445 - | L-arabinose isomerase TERM 139 118399 - 118416 + g 74 -7.7 -4.18197 | gap 1 GACTTCACGCATATT GTC-GCCG AAG CGGCAGAC TTTTAGCTGGCGGGT araB 120667 - 118958 - | L-ribulokinase TERM 140 120030 - 120005 - G 71 -7.6 -4.00756 | gap 2, opp_overlap 120005 GAGTTCATCAAAGAA GCTCGCGGGCGG CAGA CCGCCC-C-AGC TTGCATGCCACAGTG araC 121007 - 121852 + | arabinose operon regulatory protein yabI 121971 - 122738 + | DedA family integral membrane protein yabJ 123484 - 122777 - | hypothetical ABC transporter yabK 125078 - 123468 - | putative ABC transporter integral membrane protein TERM 141 123571 - 123533 - G 76 -12.5 -2.73408 | overlap 123530 ACGTAAAGCAGAGCA GCAG-CAGTATCAGCGCGG TCA CCGCGCCG-TCCTGGCTGC GGTAGGAGCCGATCT TERM 142 123697 - 123678 - G 70 -9.2 -3.67564 | opp_overlap 123665 123684, overlap 123668 123665 AAGTACGCAGGCAAA CGCCAGCG CCTG CGCCAGCG GACGTTTCAGCGCCC TERM 143 124491 - 124472 - G 77 -4.2 -4.95758 | gap 1, opp_overlap 124472, overlap 124473 124475 124476 AGCAGAGCATAAAAA TCAGCGCCG CGA CGG-GCGGA ATTTGGCGGCGCAGC tbpA 125920 - 125054 - | thiamine-binding periplasmic protein precursor TERM 144 125681 - 125696 + g 78 -6.8 -4.56597 | opp_overlap 125669 125681 ATAGCCGTAATCGAA CGGCAC AAAT GTGTCG TTTTTCCAGCCGCCG yabN 127873 - 126215 - | putative ABC transporter periplasmic solute binding protein TERM 145 126667 - 126679 + gr 72 -4.7 -4.56597 | TCAGCGTGAGGGTTT CCAGC CCG GCGGG TTTTTCGCCCGGGCC SEN0110A 128147 - 127821 - | hypothetical protein TERM 146 128150 - 128172 + r 100 -16.4 -5.95539 | opp_overlap 128147 AGCCTAAAATCACCC GCCAGCAGAT AAT ATCTGCTGGC TTTTTTTATTTCGGC SEN0110B 128575 - 128249 - | hypothetical protein TERM 147 128606 - 128594 - R 89 -6.3 -5.43866 | GAAGCGTCAAAAAAA CAGTT GGA AACTG TAGCTGCATCTGACC TERM 148 128739 - 128690 - R 72 -6.5 -4.25256 | opp_overlap 128695 128696 128698, overlap 128692 128694 128696 128698 128708 CTGGGATTAAAATAA GATAGATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCGTTTTG GTATCAACGCATAAA TERM 149 128737 - 128692 - R 76 -9.1 -3.72481 | opp_overlap 128695 128696 128698, overlap 128690 128694 128696 128698 128708 GGGATTAAAATAAGA TAGATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCGTTT TGGTATCAACGCATA TERM 150 128733 - 128694 - R 85 -12.5 -3.43405 | gap 2, opp_overlap 128695 128696 128698, overlap 128692 128690 128696 128698 128708 GATTAAAATAAGATA GATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGT--C GTTTTGGTATCAACG TERM 151 128695 - 128734 + r 100 -15.2 -4.34402 | opp_overlap 128694 128692 128690 128696 128698 128708, overlap 128696 128698 ATTAAAATAAGATAG ATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCG TTTTGGTATCAACGC TERM 152 128733 - 128696 - R 100 -18.7 -3.26836 | opp_overlap 128695 128696 128698, overlap 128694 128692 128690 128698 128708 TTAAAATAAGATAGA TACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTC GTTTTGGTATCAACG TERM 153 128696 - 128733 + r 100 -18.7 -3.2032 | opp_overlap 128694 128696 128692 128690 128698 128708, overlap 128695 128698 TTAAAATAAGATAGA TACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTC GTTTTGGTATCAACG TERM 154 128731 - 128698 - R 100 -21.3 -3.17888 | opp_overlap 128696 128695 128698, overlap 128694 128696 128692 128690 128708 AAAATAAGATAGATA CCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGG TCGTTTTGGTATCAA TERM 155 128698 - 128731 + r 100 -21.3 -3.16202 | opp_overlap 128698 128694 128696 128692 128690 128708, overlap 128696 128695 AAAATAAGATAGATA CCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGG TCGTTTTGGTATCAA leuD 129348 - 128743 - | 3-isopropylmalate dehydratase small subunit leuC 130759 - 129359 - | 3-isopropylmalate dehydratase large subunit TERM 156 129811 - 129789 - G 81 -12 -3.52192 | TGTAAGCCCATATAA GCCAGCGC TTTTTCG GCGCTGGC GCGCTCAACCGGATC TERM 157 129880 - 129911 + g 74 -11.6 -3.27475 | gap 1, overlap 129879 129883 AAATCACCTGGCCCG GATTCGTGCCCCAGG TCA CCTGCGGCGCGA-TC TCTTCTGCTCGCAGG TERM 158 129883 - 129909 + g 95 -14.4 -3.20322 | overlap 129880 129879 TCACCTGGCCCGGAT TCGTGCCCCAGG TCA CCTGCGGCGCGA TCTCTTCTGCTCGCA TERM 159 130176 - 130188 + g 86 -10.5 -4.12188 | ACGTGCCCGGTGCCG CCGGC GCT GCCGG TTTTACCGATGATCG TERM 160 130278 - 130290 + g 70 -9.1 -3.6502 | ATGGTTTTAGCGCGC CCCTG TTT CAGGG TTTGCGTCGCCAGTA leuB 131853 - 130762 - | 3-isopropylmalate dehydrogenase TERM 161 131774 - 131756 - G 74 -6.6 -4.36262 | opp_overlap 131756, overlap 131757 ATACGCATATCAAAA CGGCTGCG TAC CGCATCCA TAACTTTCAGGGCTT leuA 133424 - 131853 - | 2-isopropylmalate synthase TERM 162 131890 - 131900 + g 70 -5.4 -4.44355 | TCTTTATTTTGAGCT TTGC GTT GCAA TTCTTTTTCAACTTC TERM 163 133467 - 133494 + r 100 -14.2 -3.75629 | opp_overlap 133472, overlap 133472 TTGCGTCAGGCATAA AAAAACCCGCGC AACG GCGCGGGTTTTG TTTGACTTCGAGCTG TERM 164 133472 - 133489 + r 100 -14.1 -4.94058 | opp_overlap 133472, overlap 133467 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG TERM 165 133489 - 133472 - R 100 -14.1 -5.64274 | opp_overlap 133472 133467 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG leuL 133598 - 133512 - | leu operon leader peptide leuO 134255 - 135199 + | probable activator protein in leuABCD operon TERM 166 135206 - 135242 + F 100 -16.2 -4.65838 | opp_overlap 135204 135212 AAGCGATAAAACCGG GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC TTTTTAGCGTATATA ilvI 135584 - 137245 + | acetolactate synthase isozyme III large subunit ilvH 137248 - 137739 + | acetolactate synthase isozyme III small subunit TERM 167 137863 - 137888 + F 100 -7.6 -5.75945 | CCAACAGGAATTATC GCCCAACC CAATATCACC GGTTGGGC TTTTTTTTGCGAAAT fruR 138023 - 139027 + | fructose repressor yabB 139633 - 140091 + | hypothetical protein yabC 140093 - 141034 + | hypothetical protein TERM 168 141111 - 141124 + G 70 -6.7 -4.19238 | TGCCTTGCCTGGCGT GATCG GTGA CGATC TTTTGCGGTTCGGGA TERM 169 141355 - 141342 - g 81 -8.1 -4.2803 | opp_overlap 141341 141339 GATCGCAACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCCC ftsL 141031 - 141396 + | cell division protein FtsL ftsI 141412 - 143178 + | penicillin-binding protein 3 precursor TERM 170 143524 - 143488 - g 70 -7.1 -4.14739 | overlap 143490 143518 TGAGCCATCTGAAAA CATGCGTCTGGTGGCGG TGA CCGGCACCAATGGCAAG ACCACCACCACCCAA TERM 171 144292 - 144266 - g 75 -6.4 -4.57073 | opp_overlap 144274 GATGCGCTGGAAAAA GCGTTGCAGGCG GCG CGTCTGCATTGC GCCGGAAAATTGTGG murE 143165 - 144652 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopim ligase murF 144649 - 146007 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alan alanyl ligase TERM 172 146938 - 146952 + G 71 -5.7 -4.2349 | opp_overlap 146937 146938 TGGGCTCCTTTAAAC TACGC GGACA GCGTA TTTTCCGTATGGCGC mraY 146001 - 147083 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 147086 - 148402 + | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase TERM 173 149183 - 149210 + G 77 -7.8 -4.26076 | gap 1 ATCCGTTCGGCAGCG GTTATCAGCTGAC GCA GTC-GCTGATGGC TTTTGGTCGCGGTGA ftsW 148489 - 149646 + | cell division protein FtsW murG 149643 - 150710 + | UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase murC 150829 - 152304 + | UDP-N-acetylmuramate:alanine ligase TERM 174 152705 - 152690 - g 95 -5.4 -5.30348 | gap 1, opp_overlap 152690 AGCGAAGAACAAAAA GCG-CGA ATT TCGGCGC TGGGTTTACCGCTGA ddlB 152297 - 153217 + | D-alanine:D-alanine ligase B ftsQ 153219 - 154049 + | cell division protein FtsQ ftsA 154046 - 155308 + | cell division protein FtsA ftsZ 155369 - 156520 + | cell division protein FtsZ TERM 175 156700 - 156690 - g 82 -5.4 -5.04385 | CACACCGGCAAAAAA GTCA CCC TGAC ATTACGCCCTGCGCC TERM 176 157465 - 157455 - g 70 -6.8 -4.08216 | GCAGTCCTGGCAAAA CAGG AAG CCTG GGAATTTGTGACCTT lpxC 156621 - 157538 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 177 157563 - 157606 + F 100 -6.7 -5.90981 | opp_overlap 157563, overlap 157550 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTTG TTTTTTTTACTATCC TERM 178 157674 - 157687 + F 74 -5.9 -4.64334 | opp_overlap 157674 GGTTAAATGGAAACA CGGCG CGTT CGCTG TTTTCTTAGCCGATT yacA 157886 - 158314 + | hypothetical protein TERM 179 158344 - 158360 + F 74 -11.5 -2.79175 | overlap 158343 TTTACTTTATTTGTA GCTCCGC GGC GCGGGGC ATTTGAGACTTTATT TERM 180 159317 - 159330 + G 70 -9.5 -3.36515 | overlap 159315 CGTCACCGCCGCGCT GCGCG CGCA CGCGC TGTTTACCCGTGACG TERM 181 159492 - 159482 - g 75 -6.8 -4.50661 | opp_overlap 159483 159485, overlap 159483 159485 AATTCAGAATGAAAA CCAG ACG CTGG CGTCTATTACCTTCC secA 158376 - 161081 + | preprotein translocase SecA subunit TERM 182 161218 - 161189 - f 85 -13.7 -3.11072 | opp_overlap 161195, overlap 161195 GGCATTGAACACAGA TAAAAAGGCGCAG GCGA CTGCGCCTTTTTT ATGGATGCAACAAGA TERM 183 161212 - 161195 - f 100 -12.7 -5.09685 | opp_overlap 161195, overlap 161189 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA TERM 184 161195 - 161212 + F 100 -12.7 -5.28176 | opp_overlap 161195 161189 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA mutT 161233 - 161628 + | 7,8-dihydro-8-oxoguanine-triphosphatase TERM 185 162445 - 162423 - f 78 -6.2 -4.56597 | overlap 162425 162426 TTTCGTCGCTAAAAA TACCCGATCG CGA CGATCGGCGA TGGCTCTTCCAACTA TERM 186 162443 - 162425 - f 77 -8.8 -3.90048 | overlap 162423 162426 TCGTCGCTAAAAATA CCCGATCG CGA CGATCGGC GATGGCTCTTCCAAC TERM 187 162442 - 162426 - f 79 -12.3 -2.93708 | overlap 162425 162423 CGTCGCTAAAAATAC CCGATCG CGA CGATCGG CGATGGCTCTTCCAA SEN0141 162736 - 163677 + | putative lysR-family transcriptional regulator yacG 163865 - 163674 - | hypothetical protein TERM 188 163814 - 163788 - G 72 -3.7 -4.77165 | GCGTTTAGAACAAAA TGGGCGGAA GGGGCTAAT TTCCCCCCA GACGACCGGTTTACC yacF 164618 - 163875 - | hypothetical protein yacE 165238 - 164618 - | hypothetical protein TERM 189 164846 - 164869 + g 74 -4.5 -4.7254 | overlap 164867 CGTTTCGGGCGTCAC GTCAACCAC CAGTAC GCGGTTGGC TTTTTGATACAGCCT TERM 190 165030 - 165019 - G 74 -2.2 -5.0538 | overlap 165021 CCGGATGCGAAAAAA TACG CTCA CGCA GCGCCCGGCGACGTA TERM 191 165832 - 165801 - g 74 -2.2 -5.03314 | gap 1, opp_overlap 165810, overlap 165803 CTGATTTCGAAAAAA CCGTGCAG-ATTCTG GCG CTGAATCCTGCGCTG AACTTTGTCTGTATT guaC 165464 - 166507 + | GMP reductase TERM 192 166514 - 166537 + T 93 -14.6 -3.32963 | opp_overlap 166510 AGCCTCTAATATTCT GGCTGGCGTA AATG TGCGCCAGCC TTATCCCATCCCGCT hofC 167740 - 166538 - | protein transport protein HofC hofB 169115 - 167730 - | protein transport protein HofB ppdD 169562 - 169125 - | prepilin peptidase dependent protein D precursor TERM 193 169774 - 169752 - R 100 -17 -2.91582 | CAGGTGATTTATAGA CCCGACGGCG CAG CGCCATCGGG TGGAGAGGATCAGCA nadC 170530 - 169784 - | nicotinate-nucleotide pyrophosphorylase ampD 170765 - 171328 + | AmpD protein (anhydro-N-acetylmuramyl-tripeptide amidase) ampE 171325 - 172179 + | AmpE protein TERM 194 172179 - 172202 + T 73 -9.6 -3.4252 | gap 1 TGGGGCATTAGTGTA GCGTT-GTGCC GAT GGCGCTAACGC TTATGCTGCCTACAA SEN0152 173221 - 172271 - | putatuve glycosysl hydrolase TERM 195 173011 - 173040 + g 76 -10.7 -3.71649 | overlap 173015 TGCGGTGCATTTCCG GTGCCCAGATGAG CTGG CTCATCGGGCCAC TTTCCGGTTTGCGCC SEN0153 174627 - 173221 - | putative symporter TERM 196 173504 - 173476 - G 72 -3.8 -4.82667 | gap 1, opp_overlap 173484, overlap 173477 CCAGGAGAGCAAAAA GCC-GACCATCGC CCCG GCAATCGCCAGGC CCAGTTTCAGGAAGA TERM 197 173543 - 173561 + g 74 -6.7 -4.27584 | opp_overlap 173525 173543, overlap 173525 CCGGAGAAGCTAATA CCGGTAA TGCGT TTGCCGG TTTTCCATTCGCCGT TERM 198 173719 - 173695 - G 85 -11.3 -4.03815 | opp_overlap 173694 173692, overlap 173690 173709 ATCAAAGAAATAGAA CGCGCAGGAGA AAA TCGCCAGCGCG ATATTGGTCCAGAAA TERM 199 173720 - 173709 - G 73 -5.8 -4.4648 | opp_overlap 173694 173692, overlap 173695 173690 ACGCGCAGGAGAAAA TCGC CAGC GCGA TATTGGTCCAGAAAA TERM 200 174773 - 174750 - R 100 -16 -3.51924 | CTGTGAGGCAGATAA CACCCTCCCC GGAC GGGGAGGGCG GAAAAGTAACGTCAC aroP 176161 - 174791 - | aromatic amino acid transport protein AroP TERM 201 175948 - 175932 - G 74 -7.9 -4.11484 | opp_overlap 175935, overlap 175935 GCGAAGTGGCTAAAA GAGCCGG CGA CCGGTTC TTCAACCACCATCTC pdhR 176727 - 177491 + | pyruvate dehydrogenase complex repressor TERM 202 177614 - 177560 - f 74 -8.1 -3.90112 | gap 1, opp_overlap 177581, overlap 177564 177567 TGCGCGGCAACTAAA CGCAGAACCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGGTTCCA-G ATAACTCAACGTATT TERM 203 177611 - 177564 - f 86 -14.4 -2.70979 | opp_overlap 177581, overlap 177560 177567 CGGCAACTAAACGCA GAACCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGGTTC CAGATAACTCAACGT TERM 204 177608 - 177567 - f 79 -10.3 -3.49878 | opp_overlap 177581, overlap 177564 177560 CAACTAAACGCAGAA CCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGG TTCCAGATAACTCAA TERM 205 179766 - 179742 - g 71 -12.1 -2.50479 | overlap 179741 179738 179746 CTGAACGAAAACTAC CACATGCCGGC CAT GCCAGCAGGTG CCGAGGAAGGTATCC aceE 177651 - 180314 + | pyruvate dehydrogenase E1 component TERM 206 180642 - 180608 - g 90 -10.6 -4.33203 | overlap 180605 180612 GAAGAGAAGAAAGAA GCGACTCCGGCAGCAG CAC CTGCTGCGGCAGCGGC GAAAGACGTTCACGT TERM 207 181725 - 181715 - g 71 -8.2 -3.78775 | opp_overlap 181715 GTCTTCATCATGAAA GCGG TTG CCGC TGCTCTGGAACAGAT aceF 180329 - 182212 + | dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase TERM 208 182221 - 182238 + F 100 -14.1 -5.88471 | opp_overlap 182221 GATGTAAGCGAAAAA GCCGGCC CGAC GGCCGGC TTTTTTTTGATAATC TERM 209 182238 - 182221 - f 100 -14.1 -4.75174 | opp_overlap 182221 GATGTAAGCGAAAAA GCCGGCC CGAC GGCCGGC TTTTTTTTGATAATC TERM 210 183195 - 183182 - g 78 -2.3 -5.16572 | opp_overlap 183188 ATGGAAGGCAAAAAA GCCCC GGCT GAAGC GCAGCGTTATGATGC TERM 211 183278 - 183250 - g 73 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCGGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGCT lpdA 182414 - 183838 + | dihydrolipoamide dehydrogenase TERM 212 183877 - 183892 + F 100 -10.4 -5.64274 | opp_overlap 183877 ACCCGATACAAAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG TERM 213 183892 - 183877 - f 100 -10.4 -5.37043 | opp_overlap 183877 ACCCGATACAAAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG SEN0159 184127 - 184411 + | probable secreted protein SEN0160 185240 - 184449 - | probable secreted protein TERM 214 184729 - 184748 + g 71 -4.9 -4.67234 | opp_overlap 184742, overlap 184731 184742 ACGTCGCCTGCTTTG GTTGGCC AGTACA GGCCATC TTTTTGGCCTTCGCT TERM 215 185100 - 185113 + g 73 -5.9 -4.42765 | GTCATCGCCCAGTAG CGCGG TAAG CTGCG TTTCGTTTTTTCCGG yacH 186875 - 185253 - | hypothetical protein TERM 216 185562 - 185589 + g 70 -3.2 -4.68724 | gap 1, overlap 185564 GGATTTATTCAGTGT CTGCTG-CGCCGC CTC GCGACGACTGCTG TTTTGTGTTCCGTCA TERM 217 187790 - 187760 - g 76 -3.3 -5.00616 | gap 1, opp_overlap 187745 CGCTGGCGGAAAAAA TCACC-GTCACCGT TTTC AAAGTGACCGGCGA AACGAATACCGACGA TERM 218 188992 - 188968 - g 71 -5.7 -4.30987 | ACCGTTGAGAAGAAA GGCAAGAAAAA CAT CTTCTCTGGCC GCATCCTGGAAATCG acnB 187264 - 189861 + | aconitate hydratase 2 (citrate hydro-lyase 2) TERM 219 189889 - 189868 - T 100 -18.7 -3.09273 | opp_overlap 189883 GCGGTGTAACAGAGA CGGGCCCGG ATTT CCGGGCCCG AATGGCGCTTCTTAT SEN0163 190365 - 189901 - | hypothetical protein SEN0164 191106 - 190783 - | hypothetical protein yacL 191377 - 191739 + | hypothetical protein TERM 220 191821 - 191837 + F 100 -13.7 -5.24129 | opp_overlap 191817 TCGCCAAACATTCCA GCCGGGA GTA TCCCGGC TTTTTTATAGCAGAA TERM 221 192120 - 192108 - g 78 -6.9 -4.65895 | opp_overlap 192119 TGCCTTATTTAAAAA CGGCG CGG CACCG CTGATTGGCGCTTTT TERM 222 192652 - 192671 + G 71 -4.2 -4.56883 | ATTCTGCTCGGCGTG CTGACAAC GTTC GTTGGCGG TTTCTTTAATATTCG kdgT 191974 - 192927 + | 2-keto-3-deoxygluconate permease TERM 223 193638 - 193622 - g 84 -13.7 -3.08798 | ACTTTTTATGCAAGA CCGGCAG CGG CTGCCGG TGCTGGTGGTGGCCG SEN0167 192924 - 194195 + | hypothetical protein SEN0168 194185 - 195168 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 224 195430 - 195391 - g 100 -15 -4.90869 | overlap 195394 195395 195417 ACCACCAATGAAAAA CAACTGCGATCGCCCGCT GAAA AACGGGCGATCGCACGCG TTGCCGCATCGCTGG TERM 225 195427 - 195394 - g 100 -17.5 -4.54681 | overlap 195391 195395 195417 ACCAATGAAAAACAA CTGCGATCGCCCGCT GAAA AACGGGCGATCGCAC GCGTTGCCGCATCGC TERM 226 195426 - 195395 - g 100 -21 -3.31182 | overlap 195394 195391 195417 CCAATGAAAAACAAC TGCGATCGCCCGCT GAAA AACGGGCGATCGCA CGCGTTGCCGCATCG SEN0169 195178 - 195945 + | putative transcriptional regulator speD 196769 - 195975 - | S-adenosylmethionine decarboxylase proenzyme TERM 227 196751 - 196761 + g 72 -2.4 -4.93595 | GATTGTTAAAGCCAT GCAG TTT CAGC TTTTTCAATTTTTAT speE 197650 - 196790 - | Spermidine synthase TERM 228 197113 - 197092 - G 74 -2.1 -5.06414 | overlap 197093 TCTGGGCAACAAAAA TGCCGCCCG GATT CAGGCAACG CTTACAGCCTTCATA TERM 229 197732 - 197707 - R 81 -12.7 -3.16154 | opp_overlap 197710, overlap 197710 CAACATCATAGCTAA CAATGACCGTG GATG CACGGTCATTA TTTCAGCAATAGGAT TERM 230 197710 - 197729 + r 95 -12.2 -3.91716 | opp_overlap 197707 197710 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG TERM 231 197729 - 197710 - R 93 -12.2 -3.71487 | opp_overlap 197710, overlap 197707 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG yacC 198104 - 197757 - | hypothetical protein TERM 232 198357 - 198382 + G 70 -6.7 -4.07568 | CTGGGGGTTGCATCA GCGCTGCCGCT GTGG AGCCGCGCCGC TTTTGCCGCCGAACG TERM 233 198777 - 198740 - g 71 -9.7 -3.52906 | opp_overlap 198752, overlap 198738 198748 TCATCCGCACAAACA CGGCAAAACCGGGCGCC AGGT GGCGATGGGCCTTGCCG GACTGGTGCTGATTG cueO 198306 - 199916 + | possible multicopper oxidase precursor TERM 234 199967 - 199986 + T 100 -15 -3.35358 | opp_overlap 199967, overlap 199961 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG TERM 235 199986 - 199967 - T 100 -15 -3.30124 | opp_overlap 199967 199961 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG gcd 202384 - 199994 - | glucose dehydrogenase TERM 236 200804 - 200818 + g 70 -7.1 -4.07885 | GAACGGCTGAGTTTT GGCGA CGTAA TCGCC TTTTGCCGCGCCCTG TERM 237 200824 - 200842 + g 75 -5.8 -4.56597 | CGTAATCGCCTTTTG CCGCGCCC TGC GGGACCGG TTTTTCCGGGGCGGG TERM 238 202632 - 202612 - g 71 -11.9 -2.53015 | ATACTGTTGAAGTCA TGATCCCCG AAG CGGAGATCA AAGCACGTATTGCCG hpt 202590 - 203126 + | hypoxanthine phosphoribosyltransferase yadF 203846 - 203184 - | carbonic anhydrase TERM 239 203425 - 203437 + g 73 -5.5 -4.56597 | AGCGCGTCCAGACGT TGCTC TTC GGGCA TTTTTCCCAACAGCG TERM 240 204636 - 204620 - g 76 -5.1 -4.72986 | TACCTCCATGAAAAA TCTGCTT TCA AAGCTGA AATCGGAGACGTTTA yadG 203955 - 204881 + | hypothetical ABC transporter ATP-binding protein TERM 241 205111 - 205123 + G 76 -3.3 -5.00616 | overlap 205102 TAACTCCTACGCGAA TGTCG CGT CGTCA TTTTTTAGCGCCAAG TERM 242 205424 - 205438 + G 71 -6.4 -4.2828 | overlap 205413 CTGACGCCGCTGACC TACCTC GGC GGGGTA TTTTACTCGCTGACG yadH 204878 - 205648 + | ABC transporter integral membrane protein stiH 206847 - 205768 - | putative fimbriae TERM 243 206250 - 206264 + g 71 -4.9 -4.58395 | GGGGAATATTATCTC CGCTG CTGCC CGGCG TTTTTGACAAATAGA TERM 244 206743 - 206768 + g 71 -10.4 -3.17723 | opp_overlap 206738 206739 AAAGAAATTATGCGT GCCGCTGGTG GGTTGA CACCAGCCGC TTCCGTTGCCCATCG stiC 209402 - 206856 - | putativie fimbrial usher. putativie fimbrial usher TERM 245 207021 - 206990 - G 81 -13 -3.13403 | overlap 206988 207013 GGCCGCTGAGGAAGA CCTGGCCTTTATCG CCGA CGATACTGGCCAGG TTCGCATCCTGCCCA TERM 246 207316 - 207326 + g 71 -8.2 -3.91911 | opp_overlap 207308, overlap 207311 ACCGAAACGCCGCTG GCGC CGG GCGC TTTAATTAAAATCGC TERM 247 208673 - 208701 + g 76 -12.5 -2.8294 | overlap 208672 CGGCGGTGAACTGGC TTTTCAGCGCGAT AAT GTCGCGCTGTAAA TAGTTATAAACGCTG TERM 248 209211 - 209224 + g 87 -8.1 -4.58466 | opp_overlap 209208, overlap 209208 AGTGACGTAATAGGT GCCAG GCAG CTGGC TTTTGTCGTTATCAA stiB 210112 - 209429 - | putative fimbrial chaparone TERM 249 210154 - 210133 - R 95 -11.5 -4.68209 | overlap 210135 ACCTCAATAAACAAA GGGGCCAGC CGAC GCTGGCCAC CAGGATCAGTTATAT TERM 250 210152 - 210135 - R 78 -12.7 -2.63182 | overlap 210133 CTCAATAAACAAAGG GGCCAGC CGAC GCTGGCC ACCAGGATCAGTTAT stiA 210699 - 210160 - | putative fimbrial subunit TERM 251 211039 - 211025 - H 79 -2.8 -5.40072 | TGTCGGCCAAAAAAA CATGCT GAC ATCATG CAGGATTGGAGCTCA yadI 211069 - 211509 + | putative PTS system IIA component TERM 252 211691 - 211663 - g 74 -10.4 -3.52909 | gap 1, overlap 211661 GCAAACGACGAAAGA TGCCGCC-ATCTG GTCG CAGATTGGCGACA AAATGGTGACCGTAG yadE 211571 - 212800 + | hypothetical protein panD 213187 - 212807 - | aspartate alpha-decarboxylase TERM 253 213250 - 213267 + r 74 -5.5 -4.59109 | overlap 213235 CTGCTTTGGAAATTC TCAGGCA GTAT TGCCCGA TTTTTAACCCCTGTC panC 214136 - 213282 - | Pantoate--beta-alanine ligase TERM 254 213861 - 213884 + g 74 -6.7 -4.24711 | TTCCTCAACGGCTGG CGCAAAGAC ATAATC GACTTTGCG TTTGTTCAGCTTTTC TERM 255 214030 - 214070 + g 76 -9.8 -3.78329 | overlap 214030 ACCAGCTTCATATGG C-CGTCGTGCAGGTTGCCCA TGG TGGG-AACCAGTGCGACGCG TTTACCTTCCTGACG TERM 256 214238 - 214226 - R 70 -9.1 -3.30124 | overlap 214228 CTGTAGGCCGGATAA GACGC GTC GCGTC GCCATCCGGCACGGT panB 215053 - 214262 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase folK 215653 - 215174 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase pcnB 217068 - 215650 - | poly(A) polymerase TERM 257 216035 - 216050 + g 80 -4.6 -5.02476 | overlap 216036 TCGTAATAGGCAAGG CCGCTC TCCT GAGCGA TTTTTTGCGCCATCT TERM 258 216802 - 216817 + g 73 -5.4 -4.56597 | TGCGTTGGTGGTCAC GTCGAA ATCC TTCGGC TTTTTACCGAGCAGG yadB 218150 - 217209 - | glutamyl-tRNA synthetase-related protein TERM 259 218127 - 218144 + g 76 -12.7 -2.80935 | opp_overlap 218127 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT TERM 260 218144 - 218127 - G 95 -12.7 -4.21772 | opp_overlap 218127 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT dksA 218629 - 218174 - | dosage-dependent dnaK suppressor protein sfsA 219510 - 218806 - | sugar fermentation stimulation protein TERM 261 218994 - 218951 - G 71 -4.4 -4.56597 | gap 1, overlap 218982 CGTGCGGGTGAAAAA CGTGTAATGGCGGAGTGCAGC ACC GC-GAACACCACCACTGCGCG ATGACCTGCCGCCGC ligT 220057 - 219527 - | 2'-5' RNA ligase TERM 262 220195 - 220185 - g 71 -4.6 -4.61231 | opp_overlap 220185 220185 TGACAGCCCTAAAAA CCGC GCC GCAG GTTTTGTTGTCCGCG TERM 263 220743 - 220724 - g 72 -11.4 -3.14132 | TTGCGTTTTGATGAA GCCGTCGC GATG GCGACAGC GGAACTGCTGCGCAA hrpB 220085 - 222559 + | ATP-dependent helicase HrpB TERM 264 222774 - 222794 + G 70 -9.7 -3.44527 | ACAAAAGGTGAGCCG TCGTCGGCA GCA TGACGACGA TTATGATGATGACTA TERM 265 223871 - 223903 + G 71 -8.2 -3.90744 | overlap 223886 223890 223894 ATGACATGCTGAGCG CGCGTCCGCTTGGC GTACA GCCGCGCGGCGGCG TTATTTCACCGCAGC TERM 266 224210 - 224232 + G 79 -12.7 -2.87881 | opp_overlap 224225, overlap 224197 CGCGCCGTTCCATCG GGTCGCTGG CGAAA CCGGCGACC TATCTGACCGCGTTA TERM 267 224827 - 224799 - g 77 -8.2 -4.17309 | gap 1, overlap 224793 224800 GACGACAAACAACAA TGTCGATACCTGG TTTG CC-GGTATCGACG GCAGCCAGGTGACTA TERM 268 224826 - 224800 - g 76 -11.7 -3.09301 | gap 1, overlap 224793 224799 ACGACAAACAACAAT GTCGATACCTGG TTTG CC-GGTATCGAC GGCAGCCAGGTGACT mrcB 222700 - 225222 + | penicillin-binding protein 1b; peptidoglycan synthetase fhuA 225515 - 227758 + | ferrichrome-iron receptor TERM 269 227767 - 227788 + F 100 -13.7 -4.1466 | overlap 227768 TTTCTAATTTCTTTT TGGGCACGG CTTG CCGTGCCCG TTTTACAAGTTGGCT TERM 270 227768 - 227787 + F 93 -15 -3.08314 | overlap 227767 TTCTAATTTCTTTTT GGGCACGG CTTG CCGTGCCC GTTTTACAAGTTGGC fhuC 227807 - 228604 + | ferrichrome transport ATP-binding protein FhuC TERM 271 228958 - 228940 - g 95 -11.6 -4.56597 | opp_overlap 228945 228946 228949, overlap 228942 CCCTCGCCGGAAAAA CTGGCGCG GAT CGCGCCGG GGCGCGGGTTCGATT TERM 272 228956 - 228942 - g 75 -12.8 -2.60032 | opp_overlap 228945 228946 228949, overlap 228940 CTCGCCGGAAAAACT GGCGCG GAT CGCGCC GGGGCGCGGGTTCGA TERM 273 229317 - 229297 - g 71 -8.3 -3.91897 | opp_overlap 229300, overlap 229300 CTGGCGATGTATAAA GAAGCGGAT GTG ATCTGCTTC GATCACGGGAATAGC TERM 274 229389 - 229417 + G 74 -8 -4.04174 | overlap 229383 229388 CATGCCGTTTGTCCG CGCCGGGCGCTT TCACC GGGTGCCCGCCG TTTGGTTCTATGGCG fhuD 228604 - 229494 + | ferrichrome-binding periplasmic protein precursor TERM 275 229579 - 229532 - g 100 -13.6 -4.56597 | opp_overlap 229521 229531 229532 229567, overlap 229576 229577 TGGCGGCGTGAAAAA CGCCTTATCCGACCTACG GTTCGGGCGCTT TGTAGGCCGGATAAGGCG AAGCCGCCATCCGGC TERM 276 229903 - 229956 + G 83 -15.2 -2.74523 | overlap 229901 229901 TATGGGCGATTCCCG GCGCGCTGGCGACGCAGTTTGCCG CCCTGA CGGGAGCCTGTATCGTCGGCGCGC TGGTGTTCGGCGTGG TERM 277 230403 - 230421 + G 77 -7.3 -4.33785 | overlap 230388 GCGCGCCTGATGCTG GCGCCGC TCATT GGGGCGC TTATTTTGTGGCTAT TERM 278 230582 - 230604 + G 71 -7.6 -3.965 | opp_overlap 230570, overlap 230583 230589 230592 GAACGCCAGCGATCG TGTGGCGGCG GAA CGTCGGCACG TTCTTGCTTTTGCCG TERM 279 230968 - 230983 + G 86 -11.8 -3.85698 | opp_overlap 230967, overlap 230969 TGATTATTATGATAG CCGCCG GGCG CGGCGG TTTCTCGCCGCAACG fhuB 229491 - 231548 + | ferrichrome transport protein FhuB precursor TERM 280 231922 - 231906 - f 85 -12.3 -3.45571 | opp_overlap 231906, overlap 231900 CTTTTTAAATATTAA GATGCGG ATG CCGCATC TTTAATGCATCTCGT TERM 281 231906 - 231922 + F 93 -12.3 -3.7829 | opp_overlap 231906 231900 CTTTTTAAATATTAA GATGCGG ATG CCGCATC TTTAATGCATCTCGT TERM 282 232009 - 231977 - f 100 -12.3 -4.4648 | opp_overlap 231983 ATTTTCATTATAAAA CTTCGATAATAAAAT ATT ATTTTTTTATCGAAG TAATAAAAAACAACT TERM 283 231983 - 231995 + F 85 -3.5 -5.61596 | opp_overlap 231977 ATTATAAAACTTCGA TAATA AAA TATTA TTTTTTTATCGAAGT stfA 232485 - 233045 + | major fimbrial subunit stfa (putative fimbrial subunit) TERM 284 233084 - 233052 - f 100 -15.7 -3.75629 | opp_overlap 233054, overlap 233054 TATCTGTAAGTGAAA TATCATCCTGCGGCA GTC TGCCGCAGGATAATG CTTAAAGTAAAAAAA TERM 285 233082 - 233054 - f 100 -18.3 -3.46068 | opp_overlap 233054, overlap 233052 TCTGTAAGTGAAATA TCATCCTGCGGCA GTC TGCCGCAGGATAA TGCTTAAAGTAAAAA TERM 286 233054 - 233082 + F 90 -16.1 -2.73364 | opp_overlap 233054 233052 TCTGTAAGTGAAATA TCATCCTGCGGCA GTC TGCCGCAGGATAA TGCTTAAAGTAAAAA TERM 287 235461 - 235432 - g 80 -4.3 -5.03314 | gap 1, opp_overlap 235447 235449, overlap 235436 CTCAGCGGTAAAAAA GCCAT-GGGCAG TATCCGC CTGCGCGATGGC GGCACGCCGCCCTTC stfC 233131 - 235788 + | outer membrane usher protein stfc (putative fimbrial outer membrane usher) stfD 235806 - 236558 + | periplasmic fimbrial chaperone stfd stfE 236577 - 237089 + | minor fimbrial subunit stfE (putaive minor fimbrial subunit) stfF 237086 - 237562 + | minor fimbrial subunit stff stfG 237562 - 238092 + | putative minor fimbrial subunit SEN0206 238092 - 238931 + | hypothetical protein TERM 288 239013 - 238986 - T 100 -9.9 -5.96521 | gap 2, opp_overlap 238985 238982 ATGAACCAAAAAAAA GCCGGGT--GGCG GCTT CGCCTTACCCGGC CTACGTTGTTTCTGG hemL 240319 - 239039 - | Glutamate-1-semialdehyde 2,1-aminomutase TERM 289 239188 - 239178 - G 70 -6.8 -4.1711 | overlap 239149 239186 ATCAGGTGGAAGAAA CGCT TAA AGCG TTCCACGTCGCACGC TERM 290 240688 - 240713 + G 76 -3.3 -4.98531 | gap 1, opp_overlap 240676 240674, overlap 240677 240696 240697 ACATGCGCATTGGCG CGC-TGGTTC AGGTCGC GGACCATGCG TTTTTGCTTTGGCCG TERM 291 240724 - 240734 + G 77 -8.2 -4.13654 | ATGCGTTTTTGCTTT GGCC GCT GGCC TTTATCCTTTCGGCG yadQ 240489 - 241910 + | hypothetical protein TERM 292 242198 - 242184 - g 76 -5.6 -4.68994 | opp_overlap 242184 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGACCCGATG yadR 241992 - 242336 + | hypothetical protein yadS 243060 - 242437 - | hypothetical protein btuF 243897 - 243097 - | cobalamin periplasmic binding protein TERM 293 243701 - 243714 + g 70 -6.7 -4.18465 | AGATTCATTCCCTGC CAGGT AGAG ACCTG TTCTATTTTTTGCGC pfs 244588 - 243890 - | MTA/SAH nucleosidase TERM 294 244632 - 244651 + H 71 -7.9 -3.85698 | GGGCATAGTTTATCA TGCGCTT ATGGGG AAGCGCA TTTCTCAGGCGGGGA TERM 295 244842 - 244827 - g 78 -2.4 -5.14563 | overlap 244828 GTTTGCAGCAAAAAA CGCAGG TTTT CCCGCT GGAGCGCAATGCCGC TERM 296 245774 - 245793 + G 70 -7.1 -4.08945 | overlap 245752 245789 ACCTTCAATCAGGCG CTGCTGG AAGATG CCAGCGG TTTTAGCCGCCTGCT dgt 244673 - 246190 + | Deoxyguanosinetriphosphate triphosphohydrolase htrA 246320 - 247747 + | protease DO precursor; heat shock protein HtrA cdaR 247900 - 249057 + | carbohydrate diacid regulator (sugar diacid regulator) SEN0216 252146 - 249114 - | putative viral enhancing factor yaeH 252718 - 252332 - | hypothetical protein TERM 297 253065 - 253085 + G 89 -3.1 -5.47218 | TATATGGCCTGGCAA GCGCGCTGG TAT TTGGCCCGC TTTTTTTCCCTGGCG SEN0218 252965 - 254266 + | putative inner membrane protein TERM 298 254290 - 254273 - T 72 -8.3 -3.75153 | opp_overlap 254273 254273, overlap 254274 TCGCCGTAATGCAAA GGGGGGC TGTC GCCCCCG CTTTTCACTCGCTTA TERM 299 254273 - 254291 + T 79 -8.1 -4.21275 | gap 1, opp_overlap 254273 254274, overlap 254273 TCGCCGTAATGCAAA G-GGGGGC TGTC GCCCCCGC TTTTCACTCGCTTAA TERM 300 254289 - 254274 - T 77 -11.8 -2.84878 | opp_overlap 254273 254273, overlap 254273 CGCCGTAATGCAAAG GGGGGC TGTC GCCCCC GCTTTTCACTCGCTT dapD 255127 - 254303 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase glnD 257829 - 255157 - | [Protein-PII] uridylyltransferase TERM 301 257151 - 257168 + g 74 -6.9 -4.3467 | ACGTATGGATATCGC GCAGGCC GCCG GGGCTGC TTTTAATATCCGGCT TERM 302 257460 - 257444 - G 74 -6.5 -4.30987 | opp_overlap 257444 ACGTCCCATAATAAA GTCAGCA GCT CGCCGAC CTTTTGCGCCTGTTC TERM 303 257466 - 257485 + g 75 -5.7 -4.62471 | gap 1 GCTCGCCGACCTTTT GC-GCCTG TTCAT CAGGCAGC TTTTTGCGGCTTAAA TERM 304 257879 - 257849 - R 100 -16.3 -4.7497 | gap 1, opp_overlap 257844 257843 257859 GCCACCCATTAAAAA GCCGGATAATGGCG TGAA CGCC-TTATCCGGC CTACGTATTTACTCT map 258861 - 258067 - | methionine aminopeptidase TERM 305 258811 - 258821 + g 78 -2.4 -5.15381 | overlap 258808 GGCTGCCAGACGGCC CGCG ACG CGCA TTTTTTCGATGTCTT SEN0222A 258932 - 259393 + | 30s ribosomal protein S2 rpsB 259312 - 260037 + | 30S ribosomal protein S2 TERM 306 260030 - 260018 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC CGAGTAATAAGGCTT TERM 307 260211 - 260231 + F 100 -11.1 -4.89729 | overlap 260209 TATCACGTTTGGTTA GGGGGCC TGTATAT GGCCCCC TTTTTCACTTTTATA TERM 308 260467 - 260451 - g 86 -6.5 -5.03747 | AAAGCGGCGAAAAAA GCAGGCA ACG TGGCTGC TGACGGCGTAATCAA TERM 309 260506 - 260491 - g 74 -4.6 -4.72729 | opp_overlap 260491 260492, overlap 260492 TAATCAAAACCAAAA TCGACG GCAA CGTCGC TTTCATTCTGGAAGT TERM 310 260696 - 260718 + G 71 -9.8 -3.47751 | overlap 260705 CATCAACATTCGTCG CGTCGCTTCC CTG GAAGGCGACG TTCTGGGTTCTTACC tsf 260295 - 261146 + | Elongation factor Ts TERM 311 261156 - 261177 + F 100 -13.7 -4.61633 | TCCTGATTTTCCTGA GGAGCCGCC TGAG GGCGGCTTC TTTTTGCGCCTCTCT TERM 312 261226 - 261200 - f 76 -8.1 -4.07568 | gap 2, overlap 261203 GCCTCTCTTGTAAAA TCAGC-C-GACGC CTG GCGTCTGCGCTGA AATGCGACGTACAAT TERM 313 261221 - 261203 - f 73 -10.2 -3.08032 | overlap 261200 TCTCTTGTAAAATCA GCCGACGC CTG GCGTCTGC GCTGAAATGCGACGT pyrH 261291 - 262016 + | Uridine monophosphate kinase frr 262163 - 262720 + | Ribosome recycling factor TERM 314 262720 - 262700 - f 76 -8.3 -4.14627 | opp_overlap 262700 262701 262703, overlap 262701 262703 TTGGCAGATAAAGAA GCAGAACTG ATG CAGTTCTGA TTGATCTGTACGCAG TERM 315 262701 - 262719 + F 76 -11.8 -2.58999 | opp_overlap 262700 262701 262703, overlap 262700 262703 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 316 262719 - 262701 - f 78 -11.8 -3.08294 | opp_overlap 262701 262700 262703, overlap 262700 262703 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 317 262778 - 262827 + F 100 -16.5 -5.16151 | opp_overlap 262783 262784, overlap 262779 GCGGATGAGTGGTGT ACAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATTCCGTTTC TERM 318 262779 - 262826 + F 100 -20 -3.68064 | opp_overlap 262783 262784, overlap 262778 CGGATGAGTGGTGTA CAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTG CTTTTTATTCCGTTT TERM 319 262822 - 262783 - f 95 -12.8 -3.86346 | opp_overlap 262779 262778, overlap 262784 TGAGTGGTGTACAAA GCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGT TTTGCTTTTTATTCC TERM 320 262821 - 262784 - f 93 -16.3 -2.91593 | opp_overlap 262779 262778, overlap 262783 GAGTGGTGTACAAAG CGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCG TTTTGCTTTTTATTC dxr 262861 - 264057 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 321 264125 - 264136 + F 80 -5.8 -4.95854 | overlap 264117 ATATAGTCTGCGCCA CCTG ATCG CAGG TTTTTGGCTTTTTTC TERM 322 264162 - 264179 + F 100 -8.4 -5.28176 | TTTTCGGTCAGGTTA GCCGTG GTTTTA CACGGC TTTTTTGTGGATACA uppS 264370 - 265128 + | undecaprenyl pyrophosphate synthetase cdsA 265141 - 265998 + | phosphatidate cytidylyltransferase TERM 323 266299 - 266287 - g 74 -3.3 -4.89477 | opp_overlap 266296 CCTTCAATAACAAAA CGGTG GGC CAGCG CGCCGCAATTATTGC yaeL 266010 - 267362 + | hypothetical protein TERM 324 269057 - 269072 + G 80 -9 -4.12188 | opp_overlap 269057 269056 269069 AGTCGATGGGACAAT CTGCTG ATAC CAGCAG TTTTGCCGCTGATGA yaeT 267394 - 269808 + | outer membrane protein precursor TERM 325 270145 - 270133 - g 77 -7.7 -4.27584 | ATCTGCAATCTAAAA TGCAG CGT CTGCA ATCCATGAAAGCAGG TERM 326 270393 - 270365 - g 78 -11.8 -3.28924 | overlap 270350 270352 CACCGTTGCTTACAA CAGCAGCGATGT GAAAG ACATCACCGCTG ACGTACTGAAACAGG hlpA 269931 - 270416 + | outer membrane protein OmpH precursor TERM 327 270498 - 270473 - g 81 -13.3 -2.97245 | opp_overlap 270471, overlap 270468 GGATGCAGAATTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 270420 - 271445 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 328 271474 - 271510 + F 79 -9.4 -4.02005 | gap 1, overlap 271475 AGTTGCCATTCTTTT C-CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCGTG TTATTATTGCCTTTT TERM 329 271475 - 271508 + F 90 -13.1 -3.57992 | overlap 271474 GTTGCCATTCTTTTC CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG TGTTATTATTGCCTT fabZ 271551 - 272006 + | 3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase TERM 330 272070 - 272093 + G 72 -3.8 -4.79752 | overlap 272074 GACGGCGCTGTAATT GGCGCTAATG CCCA CATTGGTCCC TTTTGTATTGTTGGG TERM 331 272435 - 272423 - g 70 -9.1 -3.61715 | TATCCTCGCCAACAA CGCCA CGC TGGCG GGGCACGTATCAGTC lpxA 272010 - 272798 + | Acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase TERM 332 272888 - 272908 + G 71 -8.2 -3.89614 | opp_overlap 272888 272889 272902 ATTCGTGCGCTGAAA GCGCGCGT ACCCA ACGCCCGC TTTGTGGGCGTTGCG TERM 333 273344 - 273334 - g 72 -2.4 -4.84359 | opp_overlap 273339 273340, overlap 273336 GGACCCGGATAAAAA TGCG GCG CGCG ACGTGCTGGGTATCC TERM 334 273837 - 273806 - g 71 -4.4 -4.66833 | gap 1, overlap 273807 TGCGAACCGCAAAAA CTCGCC-GAAGCG CTGTTGC CGCTACTGGCGAA CGGTAAAACCAGCCA lpxB 272798 - 273946 + | Lipid-A-disaccharide synthase rnhB 273943 - 274539 + | Ribonuclease HII TERM 335 276311 - 276299 - g 100 -10.5 -4.82901 | overlap 276284 276301 GCGGCGCGAGAAAAA CGGCG AGC CGCCG CTGGATATCGCCGCC TERM 336 276540 - 276512 - g 85 -12.6 -3.50572 | gap 1, opp_overlap 276509 276507 AGGGATGGTAGATAA CTTCATCGACCGT AAGC ACGGTCG-TGAAG AACTCTCTTACCCGG dnaE 274563 - 278045 + | DNA polymerase III, alpha chain TERM 337 278211 - 278197 - g 76 -2.8 -5.00616 | overlap 278209 GCCTGCGCGAAAAAA GCGT AGAACTG ACGC GCAAAATCTTCGCCG accA 278058 - 279017 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha TERM 338 279040 - 279060 + F 100 -16.9 -5.75342 | CCTCATTTTTCCCAG GAGGCCGGA TAA TCCGGCCTC TTTTTTTTGGACGAG TERM 339 279232 - 279213 - g 100 -10 -5.0538 | gap 1 TGGGATTGCAAAAAA CACTGGCGC TCA GCGCC-GTG GCGGCAGGAATCATG TERM 340 279325 - 279310 - g 71 -10.4 -3.25015 | GCCAATGACCATCAA CGCCAG CGAT CTGGCG GCGAAAGAGAAAGCG SEN0240 279197 - 280960 + | putative secreted chitinase TERM 341 280996 - 280970 - f 90 -10.8 -4.34263 | opp_overlap 280970 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 342 280970 - 280996 + F 100 -15.2 -3.79849 | opp_overlap 280970 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 343 281179 - 281201 + G 71 -4.9 -4.66609 | gap 1, opp_overlap 281179 281183, overlap 281183 GAAGTTTATTGAACA TAAC-CCGCG CATC TGCGGCGTTA TTTTTGACTGGGATG TERM 344 281523 - 281533 + G 78 -6.8 -4.58242 | opp_overlap 281517 281519 ATCAGAAAAGCCCGC CAGG CTG CCTG TTTTATGACTTTTTT TERM 345 282757 - 282771 + G 77 -4.2 -4.84761 | overlap 282746 GTTGCCGGATCTGTA TGCGGA AGA TCCGGA TTTTTATCGCAATAT TERM 346 283042 - 283056 + G 79 -7.8 -4.49311 | opp_overlap 283041 GATTACGCAACAGAG TCGGGC CGT GCTCGA TTTTCTGCTGATGCT ldcC 281036 - 283177 + | lysine decarboxylase yaeR 283233 - 283622 + | hypothetical protein TERM 347 284857 - 284826 - g 77 -3.7 -5.04868 | gap 2, opp_overlap 284852 284854, overlap 284828 GTAAATTAAAGAAAA TCTGGCAGGAGCAGG GGAT CCCGC-CCTGGC-GA CGAGACACCACGCCG mesJ 283766 - 284977 + | cell cycle protein MesJ TERM 348 284987 - 285030 + T 81 -13.2 -2.71011 | opp_overlap 285019 285029 GCCTGATGGCGCTGC GCTTATCAGGCCTACGTATC GCAT GGAACGTAGGCCGGATAAGG TGCTTGCACCACCAT rof 285321 - 285061 - | ROF protein yaeP 285526 - 285308 - | hypothetical protein TERM 349 285344 - 285359 + g 86 -10.4 -4.18018 | CACCAGTAAGTTCGC GGCAGC ATAA GCTGCC TTTTCCCTGACCGAC TERM 350 286001 - 285988 - g 81 -8.1 -4.24342 | CGCCGTATTAAGAAA GCCTG TACT CAGGC GAGCGACGTCGCGCT yaeQ 285706 - 286251 + | hypothetical protein yaeJ 286248 - 286670 + | putative release factor SEN0249 286702 - 287403 + | copper homeostasis protein CutF precursor (lipoprotein nlpE) TERM 351 287409 - 287429 + T 100 -16.9 -3.74077 | opp_overlap 287409 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG TERM 352 287429 - 287409 - T 100 -16.9 -4.72497 | opp_overlap 287409 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG proS 289195 - 287477 - | prolyl-tRNA synthetase TERM 353 287514 - 287533 + g 71 -4.2 -4.58395 | opp_overlap 287506 287514 287530 AGATAATCAACGATA TCGCCGGT TTTA ATCAGCGA TTTTTCACCGCTACG TERM 354 288452 - 288468 + g 74 -10.8 -3.53444 | overlap 288456 AGTCATTTCCTGCGT CGCCGC TGCGC GCGGCG TTTGCGGCGCGATAG TERM 355 289243 - 289225 - R 83 -13.2 -3.13343 | AGTTGAACGATCGAA CAGGCTCA ATG TGAGCCTG ATACAAAAAAAGTGA yaeB 290013 - 289306 - | hypothetical protein TERM 356 289784 - 289752 - G 91 -9.8 -4.56775 | gap 1, overlap 289778 AGCGCGTGGCAAAAA CGCCCATTC-TGGCG TTAC CGCCAAGACGGGGCG GACGAACTGTCGGCC rcsF 290414 - 290010 - | RcsF protein TERM 357 290498 - 290475 - R 88 -14.6 -3.01125 | opp_overlap 290473, overlap 290472 290478 AGCTTGCATAAATGA CAAGACGGGC AATA GCCCGTCCTG AATAATATTACAGAT TERM 358 290495 - 290478 - R 88 -12.7 -3.64915 | opp_overlap 290473, overlap 290475 290472 TTGCATAAATGACAA GACGGGC AATA GCCCGTC CTGAATAATATTACA yaeC 291348 - 290533 - | putative lipoprotein precursor yaeE 292040 - 291387 - | putative ABC transporter permease protein TERM 359 291746 - 291736 - G 83 -8.2 -4.38154 | overlap 291708 ATACGGGCGATAAAA GGCG CGG CGCC GACGGTCAGCGGTAC abc 293064 - 292033 - | putative ABC transporter ATP-binding protein TERM 360 292354 - 292364 + g 77 -8.2 -4.13767 | CTGAATAAACTTCTG CGCC AGC GGCG TTTTAGGGTGCGAGA yaeD 293254 - 293820 + | hypothetical protein TERM 361 293978 - 293964 - f 76 -4.2 -5.0916 | opp_overlap 293964, overlap 293965 293972 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 362 294010 - 293998 - f 71 -7.7 -4.00532 | overlap 294008 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGGTG TERM 363 296126 - 296089 - f 77 -3.4 -5.14563 | opp_overlap 296091 296119, overlap 296091 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 364 296189 - 296165 - f 71 -8 -3.93061 | gap 1, opp_overlap 296165 296172, overlap 296169 296175 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 365 296743 - 296731 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 366 296795 - 296777 - f 70 -8.8 -3.35798 | overlap 296780 ACCGTGTACGTACAA GCAGTGGG AGC CCCACCAC CAAAGCATTTGCTGT TERM 367 299906 - 299881 - f 83 -13.3 -3.18264 | opp_overlap 299883, overlap 299883 TCCGCCACTTATTAA GAGCCCTGAGC ATTA GCTCAGGGCTT TTTCTTTGCATATCA TERM 368 299904 - 299883 - f 100 -15.9 -3.1552 | opp_overlap 299883, overlap 299881 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTGCATAT TERM 369 299883 - 299904 + F 100 -15.9 -5.31519 | opp_overlap 299883 299881 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTGCATAT yafB 300037 - 300840 + | hypothetical oxidoreductase TERM 370 300875 - 300892 + T 87 -11.3 -3.97043 | TTTACCCCTCTTTCA CAGCTCC TGCG GGAGCTG TTCTTATATATTCGC yafC 301775 - 300861 - | hypothetical transcriptional regulator SEN0259 301880 - 303055 + | putative drug efflux protein TERM 371 303157 - 303138 - f 77 -9.3 -4.00486 | opp_overlap 303141 CCTATAACAGAAGAA CCAGTCC GGTTGA GGACTGG TTGACGTTACAGAGG yafD 303208 - 303987 + | hypothetical protein TERM 372 303998 - 304017 + F 75 -11.4 -3.07043 | opp_overlap 303976 303965, overlap 304008 304009 AATAAAGGTGCGTCA GGTCTGCC GTGG GGCAGGCC TCTTCGGGTGCTGCC yafE 304065 - 304835 + | putative methyltransferase TERM 373 304839 - 304873 + T 84 -8.6 -4.72272 | opp_overlap 304846, overlap 304840 304841 304846 AAAGCGGTATAGCAA TTTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGGC TTTTTCGTCGGACAA TERM 374 304840 - 304872 + T 82 -12.1 -3.43042 | opp_overlap 304846, overlap 304839 304841 304846 AAGCGGTATAGCAAT TTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGG CTTTTTCGTCGGACA TERM 375 304841 - 304871 + T 81 -13.4 -2.65504 | opp_overlap 304846, overlap 304840 304839 304846 AGCGGTATAGCAATT TAAAAGGCGCCG GGGGAAG CGGCGCCTTTTG GCTTTTTCGTCGGAC TERM 376 304866 - 304846 - T 91 -11.1 -4.31085 | opp_overlap 304841 304840 304839 304846 TATAGCAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGCTTTTTCGT TERM 377 304846 - 304866 + T 95 -11.1 -4.49644 | opp_overlap 304846, overlap 304841 304840 304839 TATAGCAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGCTTTTTCGT dniR 306258 - 304891 - | membrane-bound lytic murein transglycosylase d precursor TERM 378 305468 - 305519 + g 71 -7.2 -3.9318 | gap 1, overlap 305464 305473 305494 305517 TTTAAACGAACTCGT GCCAGCGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCGTTTGC TGTTTTTGAGAATTT TERM 379 305473 - 305514 + g 70 -6.5 -4.13748 | gap 1, overlap 305464 305468 305494 ACGAACTCGTGCCAG CGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCG TTTGCTGTTTTTGAG TERM 380 305494 - 305521 + g 71 -4.2 -4.64657 | gap 1, overlap 305473 305468 305517 GCTTTCATCTGTTGT TGGCAGACG-TAC GCC GTAGCGTTTGCTG TTTTTGAGAATTTCA gloB 307085 - 306330 - | probable hydroxyacylglutathione hydrolase yafS 307120 - 307842 + | hypothetical protein rnhA 308306 - 307839 - | Ribonuclease H dnaQ 308370 - 309101 + | DNA polymerase III epsilon subunit TERM 381 309195 - 309176 - T 71 -3.4 -4.90296 | overlap 309178 AAAAGGTGAGAAAAA GCGTTGAC GGGC GACACCGC AAACCGTAATATTCG TERM 382 309360 - 309384 + T 100 -8.6 -5.94597 | opp_overlap 309360 TGAAGTAAAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTCGTCTTC TERM 383 309384 - 309360 - T 100 -8.6 -6.23209 | opp_overlap 309360 TGAAGTAAAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTCGTCTTC SEN0267 310689 - 309634 - | conserved hypothetical pathogenicity island protein TERM 384 310033 - 310022 - G 71 -4.4 -4.58395 | CGCAGGCGTGAAAAA TCTG GAGC CAGA TCGCCTAATGTCTCA SEN0270 311796 - 312317 + | conserved hypothetical pathogenicity island protein TERM 385 312925 - 312909 - f 72 -9.3 -3.56092 | overlap 312910 TCAGGACTGGTGAAA GCCGCGG TGG CAGCGGC GCAGGCCGCCGCCGC TERM 386 312942 - 312910 - f 76 -11.9 -2.73441 | overlap 312909 CAGGACTGGTGAAAG CCGCGGTGGCAGC GGCGCAG GCCGCCGCCGCAG GTATGGCGCAGGATG TERM 387 314834 - 314805 - f 78 -12.1 -3.10344 | gap 1 GGGTGACGGAACAGA CGGAC-CCCGGCGG CAG CCGCCGGGCATACG GGTATAACGCGCTGA TERM 388 315027 - 315000 - f 75 -9.9 -3.53091 | overlap 315001 ACCGTCTGCTGGAAA TCCGCCGCA GGCGGCATGA TGCGGCGGA AGGCGGAGAGCCGGA TERM 389 315013 - 315001 - f 71 -10.5 -2.71712 | overlap 315000 CCGTCTGCTGGAAAT CCGCC GCA GGCGG CATGATGCGGCGGAA TERM 390 315436 - 315424 - f 72 -4.7 -4.57569 | opp_overlap 315425 315433, overlap 315425 TGAGCTGCTGAAAAA GCGGC ACA GCCGG CAGGGGGTGACGGAT TERM 391 316736 - 316715 - g 78 -6.7 -4.61231 | gap 1, overlap 316719 GGATAGGTTCAAAAA TTAACTGGTC AAA GACCAG-TAA GCATGAAAGTCTGAA TERM 392 316733 - 316719 - g 76 -10 -3.81256 | overlap 316715 AGGTTCAAAAATTAA CTGGTC AAA GACCAG TAAGCATGAAAGTCT SEN0273 316591 - 317037 + | rhs-associated protein TERM 393 317043 - 317072 + T 100 -10.7 -5.64873 | opp_overlap 317038 317035 317043 TAAGATATAATGACA GCCGGGAAGAATT ATAT AAACCTTCCCGGC TTTTTTATTATTCAA TERM 394 317072 - 317043 - T 82 -12.9 -3.01979 | opp_overlap 317043, overlap 317038 317035 TAAGATATAATGACA GCCGGGAAGAATT ATAT AAACCTTCCCGGC TTTTTTATTATTCAA SEN0274 317360 - 317103 - | hypothetical protein TERM 395 317166 - 317153 - G 71 -8.1 -3.87815 | opp_overlap 317153 317159 GTTTAGCCTGATAAA GCTGC TCGC GCAGC TTCTGCTCCTCGTTA SEN0276 318486 - 318803 + | hypothetical pathogenicity island protein SEN0277 318800 - 319267 + | exported pathogenicity island protein SEN0278 319584 - 319862 + | conserved hypothetical pathogenicity island protein TERM 396 319895 - 319919 + F 75 -2.8 -5.21236 | gap 1 GAATAATGTGTAAAA GCCG-GAGGGG TTAT CTTTTCCCGGC TTTTTATTATCAATT TERM 397 320377 - 320391 + F 80 -10 -3.85698 | ACTGTTAAAGATGTC TACCGG GAG CCGGTA TTTCTGAAGCCACCA safA 321747 - 322256 + | lipoprotein TERM 398 322268 - 322310 + F 100 -7.9 -6.01725 | gap 1, opp_overlap 322267 322270, overlap 322270 TTAATAGTAAACAAC CATTA-GTGTATTGCGCCTT GTTT AAGGCGTAATACACATCAAG TTTTTTATTTTTCTT safB 322364 - 323077 + | salmonella atypical fimbria chaperone safC 323101 - 325611 + | salmonella atypical fimbria outer membrane usher TERM 399 325877 - 325863 - g 74 -7 -4.3129 | GAGCGATGAGCAAAA GGCGGG TAA CACGCC TACCGTATTGCTGCT safD 325633 - 326103 + | fimbrial structural subunit TERM 400 326369 - 326385 + F 78 -12.3 -2.66034 | CACTCTTTTGTGAGC GGGGCTT TAT AAGCCCC TGGTATAAGGTTTGT ybeJ 326511 - 327332 + | hypothetical protein sinR 328147 - 329094 + | LysR-family transcriptional regulator TERM 401 329169 - 329189 + F 73 -7.6 -4.11216 | gap 1, opp_overlap 329156 329152, overlap 329170 GAGGCATCGAGATAT G-CGACTGG TCAG CCAGTCGTC TTTTGACGATGCCCA TERM 402 329170 - 329187 + F 82 -11.3 -3.65542 | opp_overlap 329156 329152, overlap 329169 AGGCATCGAGATATG CGACTGG TCAG CCAGTCG TCTTTTGACGATGCC SEN0288 329214 - 329429 + | hypothetical protein SEN0289 330152 - 329433 - | possible outer membrane adhesin TERM 403 329509 - 329523 + g 76 -2.8 -5.07053 | TAAGCGGTATGTTCA TCACCA GCA TAGTGA TTTTTTGAAATGCTT TERM 404 330474 - 330451 - R 95 -11.8 -3.87815 | CCCGACCTGGATAAA GCCCGTTATC CAGG AATAACGGGC AAAAATATTTACTCA SEN0290 330890 - 330483 - | probable secreted protein TERM 405 331198 - 331171 - R 79 -9.9 -3.66999 | gap 1, opp_overlap 331175, overlap 331174 331175 AGTTACGGAGTGAAA CAATCCCGCCGC GGTGA GCGGCAGG-TTG CTTACAAGGTGAATG TERM 406 331196 - 331174 - R 74 -8.3 -3.9693 | opp_overlap 331175, overlap 331171 331175 TACGGAGTGAAACAA TCCCGCCGC GGTGA GCGGCAGGT TGCTTACAAGGTGAA TERM 407 331195 - 331175 - R 78 -11.8 -2.97676 | opp_overlap 331175, overlap 331174 331171 ACGGAGTGAAACAAT CCCGCCGC GGTGA GCGGCAGG TTGCTTACAAGGTGA TERM 408 331175 - 331195 + r 73 -9.6 -3.34344 | opp_overlap 331175 331174 331171 ACGGAGTGAAACAAT CCCGCCGC GGTGA GCGGCAGG TTGCTTACAAGGTGA yafV 331967 - 331200 - | possible hydrolase TERM 409 332056 - 332039 - R 100 -14.1 -5.08088 | AAGCGGCAAGAAAAA GCCCCGC GAAA GCGGGGC AGGAAAGACACGAGA yafH 334520 - 332076 - | possible acyl-CoA dehydrogenase TERM 410 333769 - 333749 - G 70 -8.9 -3.64822 | ATTCGCCCATGCAAA CCACGCCGG TAT CCGGAATGG CGCCTGCATCAGAAC TERM 411 334337 - 334307 - G 81 -12.6 -3.03159 | overlap 334296 GGAAGCCGCGGAACA CCGGTGCGGAAATC ATT GATTTTCGCATCGG TGTGAGGTTAAACGG ghmA 334760 - 335338 + | Phosphoheptose isomerase TERM 412 335387 - 335420 + F 72 -8.1 -3.794 | opp_overlap 335388, overlap 335388 TGGTTGCGCTCAGAA ACCCCAGTCACATAG TTAT CTATGTTCCTGGGGA TTTCCTCCCTTACCG TERM 413 335419 - 335388 - f 95 -11.6 -3.85698 | opp_overlap 335387 335388 GGTTGCGCTCAGAAA CCCCAGTCACATAG TTAT CTATGTTCCTGGGG ATTTCCTCCCTTACC TERM 414 335388 - 335419 + F 77 -11.6 -2.87319 | opp_overlap 335388, overlap 335387 GGTTGCGCTCAGAAA CCCCAGTCACATAG TTAT CTATGTTCCTGGGG ATTTCCTCCCTTACC TERM 415 336278 - 336257 - g 73 -8.7 -3.91798 | TAACGGGGAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGGCGTTATT yafJ 335551 - 336318 + | hypothetical protein yafK 337029 - 336289 - | hypothetical protein TERM 416 337028 - 337015 - G 91 -3.8 -5.46657 | opp_overlap 337002, overlap 337002 CATCGCAAGAAAAAA TGCG ATTTTA CGCA TACTGCTTGTTCCTT dinP 337279 - 338334 + | hypothetical protein DinP (DNA damage-inducible protein) TERM 417 338704 - 338729 + G 75 -3.9 -4.85599 | gap 1 CAGATCTGCATCCGG GGC-GCGGCTAT CCT ATTGGCGCAGCC TTTTTCTCGCGTGGA SEN0297 338541 - 339692 + | hypothetical protein TERM 418 340104 - 340068 - g 91 -9.5 -4.66318 | opp_overlap 340067 340068 AGCACGTTAATAAAA CCGACTCGGCA-GTGCG GGCCA CGCACCTGGCGAG-CGG GATTAGTGTGAAGGT prfH 339689 - 340303 + | putative peptide chain release factor TERM 419 340420 - 340444 + T 76 -8.5 -4.18763 | overlap 340421 ATATTCCATATTGAT AGCCCGTCC AGAAATG GGACGGGCA TTTTAGCGCTTTCTT TERM 420 340421 - 340443 + T 78 -12 -3.10173 | overlap 340420 TATTCCATATTGATA GCCCGTCC AGAAATG GGACGGGC ATTTTAGCGCTTTCT pepD 341915 - 340458 - | aminoacyl-histidine dipeptidase precursor TERM 421 341639 - 341664 + g 81 -2.5 -5.40072 | GCTGGATAGGATCTG TAGTGAAGTCG TGAA CGGTGTCGCTA TTTTTTTGCGGCACC TERM 422 341896 - 341873 - G 83 -7.6 -4.57837 | gap 1 AGATTTTGGCAAAAA TATC-CCACAA AGG TTGTGGTGATA ACTGAGACAGTTCAG TERM 423 342509 - 342527 + G 73 -10.2 -3.33003 | opp_overlap 342509, overlap 342501 ACGATTTTCGCTAAA CCGGCGGG CCG TCCGCTGG TTGATGATTATGTTA gpt 342164 - 342622 + | xanthine-guanine phosphoribosyltransferase TERM 424 342637 - 342661 + F 100 -17.1 -4.78572 | overlap 342639 ATCAGCAGCTTTTCA GAGCGCCCGGC AAT GCCGGGCGCTG TTTTATTGGTTACAA TERM 425 342639 - 342659 + F 100 -19.7 -4.00694 | overlap 342637 CAGCAGCTTTTCAGA GCGCCCGGC AAT GCCGGGCGC TGTTTTATTGGTTAC TERM 426 343229 - 343259 + G 70 -3 -4.70659 | overlap 343230 ACGTGAAATGGAATT TGCCGTTCCTGGCG GTT CGCCTGTCACCGCG TTTTTACATATGCCG yafA 342711 - 343955 + | hypothetical protein crl 344013 - 344414 + | curlin genes transcriptional activator phoE 345517 - 344465 - | outer membrane pore protein E precursor TERM 427 346052 - 346069 + G 71 -6.3 -4.35926 | CAAAGCCGCCTGATT CAACTGT GGGA GCAGTTG TTTTCAATTTACGGT proB 345800 - 346903 + | glutamate 5-kinase proA 346915 - 348162 + | gamma-glutamyl phosphate reductase SEN0307 349433 - 349125 - | IS3 transposase SEN0310 350042 - 350365 + | hypothetical protein TERM 428 350482 - 350508 + F 77 -11.2 -3.22884 | opp_overlap 350479 TCGTCAAATTAATGT CTATATATTTAT TGA ATAAATATATAG TTCATAACTTACTAC SEN0311 350707 - 351945 + | putative permease/MSF transporter TERM 429 351953 - 351963 + F 72 -3.2 -5.04325 | GTTTCTGATTATAGA CACG AAG TGTG TTTTTATACTTTCCA TERM 430 352232 - 352250 + G 82 -5.3 -5.12971 | gap 1, opp_overlap 352218 352222 AGAACGCGGCCGCAC CGT-TCGG CACA CCGACACG TTTTTATTGAATATT TERM 431 353084 - 353110 + G 70 -3.1 -4.80178 | gap 1, opp_overlap 353091 AACGGCTGGCATGTT GC-TGAAAGATA TTCG TATCTCTCACGC TTTTATTGGTTCATG SEN0312 352077 - 353498 + | 3-isopropylmalate dehydratase large subunit 2 (ec 4.2.1.33) (isopropylmalate isomerase 2) (alpha-ipm isomerase 2) (ipmi 2). 3-isopropylmalate dehydratase large subunit 2 (ec 4.2.1.33) (isopropylmalate isomerase 2) (alpha-ipm isomerase 2) (ipmi 2) SEN0313 353500 - 354126 + | 3-isopropylmalate dehydratase small subunit 2 (ec 4.2.1.33) (isopropylmalate isomerase 2) (alpha-ipm isomerase 2) (ipmi 2) TERM 432 354669 - 354656 - g 74 -2.3 -5.0133 | TACGGCTGGAAAAAA CTGGC CTTC GACAG GATCATTCGGTCCGT SEN0314 354141 - 355019 + | putative fumarylacetoacetate (faa) hydrolase SEN0315 355019 - 355933 + | putative hydrolase or acyltransferase TERM 433 356022 - 355994 - gT 100 -5.1 -5.52384 | opp_overlap 355997 355998 356009 356019, overlap 355996 355997 355998 CCTGTAGGAAAAAAA CATCGCCAGCCCC TTG AGGGCTGGCCTTC TGTTGAAGATCTTTT TERM 434 356020 - 355996 - gT 79 -7.7 -4.40552 | opp_overlap 355997 355998 356009 356019, overlap 355994 355997 355998 TGTAGGAAAAAAACA TCGCCAGCCCC TTG AGGGCTGGCCT TCTGTTGAAGATCTT TERM 435 355997 - 356019 + GT 83 -10.5 -3.67052 | opp_overlap 355996 355994 355997 355998, overlap 355998 356009 GTAGGAAAAAAACAT CGCCAGCCC CTTGA GGGCTGGCC TTCTGTTGAAGATCT TERM 436 356019 - 355997 - gT 77 -11.2 -3.23247 | opp_overlap 355997 355998 356009, overlap 355996 355994 355998 GTAGGAAAAAAACAT CGCCAGCCCC TTG AGGGCTGGCC TTCTGTTGAAGATCT TERM 437 355998 - 356018 + GT 84 -14 -2.79749 | opp_overlap 355997 355996 355994 355998, overlap 355997 356009 TAGGAAAAAAACATC GCCAGCCC CTTGA GGGCTGGC CTTCTGTTGAAGATC TERM 438 356018 - 355998 - gT 86 -14.7 -2.52863 | opp_overlap 355998 355997 356009, overlap 355997 355996 355994 TAGGAAAAAAACATC GCCAGCCCC TTG AGGGCTGGC CTTCTGTTGAAGATC TERM 439 356046 - 356067 + GT 73 -10.9 -2.71712 | overlap 356045 ATCTTTTCGTTTTTG TCACCGTTG CTCG CAACGGTGG ATTTGCCCGGGCAGC SEN0317 357149 - 356877 - | hypothetical protein SEN0316 355967 - 356932 + | putative lysR family transcriptional regulator TERM 440 357626 - 357614 - fH 71 -3.5 -4.83032 | opp_overlap 357614 AGATGAAATAGAAAA TTAAT ATT ATTAA TTAAATGAATATGAA SEN0318 357841 - 358239 + | probable secreted protein TERM 441 358251 - 358276 + T 77 -10.5 -3.38046 | overlap 358248 358252 CTGAGTCTGGCTTGC CTCAGGGATAC GATC GTATCCCTGAA TATTTCCCATCAAAA TERM 442 358252 - 358275 + T 83 -14 -2.62613 | overlap 358251 358248 TGAGTCTGGCTTGCC TCAGGGATAC GATC GTATCCCTGA ATATTTCCCATCAAA stbE 359044 - 358286 - | fimbrial chaperone protein TERM 443 358580 - 358605 + gT 83 -7.8 -4.56597 | CGCTTCCGTGGGCGC TTTTAATTCG GTCGGG CGAATTAAAA TTTTTAGCCGCAAAC TERM 444 358804 - 358786 - GT 77 -10.2 -3.38046 | opp_overlap 358796, overlap 358784 GCTGCATTTTAAATA CCGGCGGC AGC GCCACCAG CGGCGTTTTGCTATT TERM 445 358796 - 358809 + gT 70 -5.2 -4.46656 | opp_overlap 358786 358784 AAATACCGGCGGCAG CGCC ACCAGC GGCG TTTTGCTATTATCCG stbD 360335 - 359010 - | putative fimbrial protein TERM 446 359335 - 359357 + gr 85 -12.6 -3.33696 | overlap 359339 GTTAGCCCCAGGCGA CGCGCCGCCG CCA CGGCGGTGGG TTGATTAACGACAAA TERM 447 359339 - 359353 + gr 78 -12.8 -2.60244 | overlap 359335 GCCCCAGGCGACGCG CCGCCG CCA CGGCGG TGGGTTGATTAACGA stbC 362901 - 360340 - | outer membrane fimbrial usher protein TERM 448 361603 - 361627 + g 77 -11.3 -3.46602 | GCTGTAACTGAGTTC CGCGCGCCAGC CTT GCTGGCGATCG TTATGCTCTGCGCGC TERM 449 362431 - 362416 - G 87 -8.2 -4.58395 | opp_overlap 362425 GTTATGGCGTAAAAA CAGCGC CAGC GCGCCG CTATCCCACTCTGAA stbB 363646 - 362885 - | fimbrial chaperone protein TERM 450 363698 - 363673 - R 95 -13.3 -4.18018 | opp_overlap 363663, overlap 363674 CCTGGCGATTGAAAA TGGTCTGGCGT TTCA ACGCCAGACCG TAGCGACGATTATTT TERM 451 363697 - 363674 - R 100 -16.8 -3.10597 | opp_overlap 363663, overlap 363673 CTGGCGATTGAAAAT GGTCTGGCGT TTCA ACGCCAGACC GTAGCGACGATTATT stbA 364244 - 363708 - | probable fimbrial protein TERM 452 365249 - 365232 - gH 100 -6.3 -5.97575 | overlap 365236 AACCTATAAAAAAAA TCACCTC CCTA AAGGTGA GTGATGAAAACGTTA SEN0324 364877 - 365641 + | possible transmembrane regulator SEN0325 365614 - 366114 + | exported protein TERM 453 367089 - 367100 + G 100 -4.4 -5.74684 | CGTTATCGGCATACT GGTT ACAA AACC TTTTTATTTTTGTTC TERM 454 367611 - 367592 - g 72 -2.2 -4.83615 | gap 1, overlap 367572 367593 CAGGTCGCAGAAAAA CTTTCAACG CTC CGT-GAAAA AGGCGTGTTAATAGC SEN0326 366416 - 367990 + | putative rtn protein SEN0327 368090 - 368833 + | possible transmembrane regulator SEN0328 368806 - 369294 + | hypothetical protein SEN0329 369695 - 370219 + | possible outer membrane protein SEN0330 370363 - 371004 + | possible transcriptionl regulator SEN0331 371015 - 371239 + | probable secreted protein SEN0332 371297 - 371656 + | probable lipoprotein TERM 455 371727 - 371678 - T 70 -9.7 -3.10344 | opp_overlap 371667 371674 371686 TTTGCAGGCAATATA TGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGGGCGCTATTTGGGCT AACCTTGCTTTTTCT TERM 456 371686 - 371719 + T 100 -18.1 -3.61103 | opp_overlap 371678, overlap 371674 CAATATATGCCTGTT TAGCGCGCGCGCCGC ACTG GCGACGCGGGCGCTA TTTGGGCTAACCTTG SEN0333 373183 - 371726 - | putative outer membrane efflux lipoprotein TERM 457 372516 - 372480 - G 74 -11.5 -3.29511 | opp_overlap 372475 372484 TTGATTTCGGCAGAA CGCAGCGCGATCTCCGC CAT ACGCAGATCGAGCTGTG TGGCGTTGCCTGTCC SEN0334 376367 - 373200 - | putative cation efflux protein TERM 458 375076 - 375088 + g 70 -6.9 -4.13767 | ATCGCCTTCTTTGCC GCCTC TCC GGGGC TTTTGCCCTGCGAGA TERM 459 375589 - 375604 + g 71 -4.6 -4.57837 | opp_overlap 375574 CGCAGACGCGTCACC TCGCCG TCAG CGCCGA TTTTTACCACAATCT TERM 460 376295 - 376284 - G 83 -7.2 -4.59773 | CGGCAGTTTTAAAAA GGCG ATAG CGCC AGCCAGCAGCATTAA SEN0335 377590 - 376364 - | putative cation efflux pump TERM 461 376820 - 376856 + g 76 -5.2 -4.82901 | overlap 376805 376821 CTGATAAGGCAGCCC GTTATCGGTGGTTAAC CCCAT GTTGACTACCGGTGAA TTTTTGTCGGAGCGG TERM 462 376977 - 376957 - G 77 -8.2 -4.10657 | CGATAGTCGTCAAAA GCGTGGCG TTACC CGCTACGC CGCCGCTGACCAGAT TERM 463 377128 - 377144 + g 81 -6.5 -4.68593 | GCGCATTACGCGTGG CGGTGAC ATC GTCAGCG TTTTTACGTGATACG TERM 464 378306 - 378324 + G 70 -3 -4.74103 | overlap 378307 TGACCCTGTTGGTGC TGACGATC CCC GGTCGCCG TTTTTACCTTAAAGG TERM 465 378832 - 378806 - g 76 -3.4 -4.99134 | overlap 378807 378808 ACCGTAAACCAAAAA GGCGCGCTCACG CTG CGGGCGACCGCC GTCGGCGGACAGACC SEN0336 377867 - 380170 + | putative cation transport atpase (ec 3.6.1.-) SEN0337 380167 - 380631 + | putative transcriptional regulatory protein TERM 466 380890 - 380876 - g 70 -7 -4.07568 | opp_overlap 380863 CGCCGCCCTGCAAAA GGCCGG TTT CCCGCC GCGCGAGAGGTAATC SEN0338 380709 - 380903 + | putative metal-binding transport protein TERM 467 381111 - 381091 - f 78 -6.1 -4.60678 | opp_overlap 381093 381094, overlap 381094 CAAAAAGATAACAAA TAAGTAGCG CAA CGCTACCTT GTTACGTCGCTTTGA TERM 468 381108 - 381094 - f 87 -10 -4.34559 | opp_overlap 381093 381094, overlap 381091 AAAGATAACAAATAA GTAGCG CAA CGCTAC CTTGTTACGTCGCTT TERM 469 381977 - 381996 + G 75 -7.1 -4.4009 | opp_overlap 381976 381977, overlap 381979 GATTTTTTATAACAT TGCCGCC ATGCTC GGCGGTA TTTTCTACGGTACGC TERM 470 382051 - 382038 - g 86 -6.7 -5.00884 | ATTGGGCGTAAAAAA GCGAT CATG ATCGC CGCCTTTCTTGCGCT SEN0339 381195 - 382448 + | putative metabolite transport protein TERM 471 382454 - 382485 + F 82 -13 -2.80988 | gap 1, opp_overlap 382450 382452 382455, overlap 382452 382478 TCGCACGTAAACACT ACGCTCCTGGCG-CA TAC TGTCGCCGGGAGCGC TCCTTCCTCCTGTGG TERM 472 382484 - 382455 - f 87 -14.3 -2.86124 | gap 1, opp_overlap 382454 382452 382478, overlap 382450 382452 CGCACGTAAACACTA CGCTCCTGGCG-CA TAC TGTCGCCGGGAGCG CTCCTTCCTCCTGTG mod 382637 - 384595 + | type III restriction-modification system enzyme (StyLTI) modification methylase res 384602 - 387577 + | type III restriction-modification system enzyme (StyLTI) (ec 3.1.21.5) TERM 473 387627 - 387655 + F 77 -10.2 -3.40299 | opp_overlap 387617 387627 387629 ATAGACCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCCTGTGCTAA TERM 474 387655 - 387627 - f 74 -5.8 -4.60143 | opp_overlap 387627, overlap 387617 387629 ATAGACCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCCTGTGCTAA SEN0342 387854 - 387955 + | hypothetical protein SEN0343 388072 - 389475 + | probable terminal oxidase subunit I TERM 475 389657 - 389673 + G 75 -5.7 -4.59853 | overlap 389663 CGAAACCTGGCTGGT GCTGGGC GGG GCCGGGC TTTTTGGCGCGTTCC SEN0344 389472 - 390482 + | probable terminal oxidase subunit II TERM 476 390629 - 390655 + G 95 -9.5 -4.83169 | CTGATACCCCCCGGA CGCGCTTTC ATCTCTCGC GAAAGCGCG TTTTTATCGACAGAT SEN0345 390499 - 390717 + | hypothetical protein TERM 477 391480 - 391465 - g 70 -3.2 -4.74103 | gap 1, overlap 391466 391467 CCCGCAACGCAAAAA CG-CGGG CTT CCCGTCA CCGGTGAATATCAGC SEN0346 390820 - 391824 + | AraC-family transcriptional regulator TERM 478 393379 - 393355 - g 91 -7.2 -4.84359 | gap 1, opp_overlap 393355 393366 CGATCTCGATAAAAA CAACGTCAGCA CCCG TGCCG-CGTTG CTTTATCTGTTCGAC foxA 391970 - 394078 + | ferrioxamine B receptor precursor yahN 394751 - 394119 - | RhtC-like transporter TERM 479 394366 - 394349 - G 76 -2.7 -5.08824 | GCGTTACGGAAAAAA TACTGAT AAAA AACAGTA CGGTTTGCGGATTGG TERM 480 394616 - 394596 - G 100 -12.5 -4.63932 | opp_overlap 394599 CAGCCCGGAATAAAA GGCGTCTCC CGT GGCGACGCC CAGGCCGGTGATGAC TERM 481 395020 - 395037 + G 71 -8.5 -3.85698 | TGCTTGGCGCATTAG CGTTTGT CGTG ACAAACG TTTATGCCGCAGAAA TERM 482 395082 - 395065 - g 91 -3.5 -5.5943 | gap 1, overlap 395066 395067 395069 AAATCATGAAAAAAA CGGACTTT GAT AAAGTC-G CCTCCGAATACACGA yahO 394983 - 395258 + | probable secreted protein TERM 483 395278 - 395302 + T 100 -12.2 -5.1356 | gap 1, opp_overlap 395278 GTTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TTTTTATTCCTGGCA TERM 484 395302 - 395278 - T 100 -12.2 -4.91109 | gap 1, opp_overlap 395278 GTTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TTTTTATTCCTGGCA prpR 397019 - 395394 - | propionate catabolism operon regulatory protein TERM 485 395643 - 395633 - G 100 -8.2 -5.42259 | CGACGCTTAAAAAAA GCGC CAG GCGC TCCATCATATTACGC TERM 486 395955 - 395972 + g 74 -4.7 -4.7373 | GATCGGCTGGTGTCC GCCGACG CGAG TGACGGC TTTTTCCTCCAGTAC prpB 397285 - 398172 + | putative carboxyvinyl-carboxyphosphonate phosphorylmutase TERM 487 398191 - 398226 + F 74 -8.2 -3.86897 | gap 1, opp_overlap 398189 398190 398210 GTAGGCCTGATAAGG CGAAGCCGCCATCAGGC AAT GCCGGATGGCA-CTACG TTTATCCCGCCTACG TERM 488 398806 - 398785 - g 71 -10.1 -3.57792 | opp_overlap 398783 GTATTCAGCCGGAAA CCGACGATG ATTC CATCGGCGG CCATTTCCTGCATCT prpC 398295 - 399464 + | methylcitrate synthase TERM 489 400531 - 400507 - g 85 -4.2 -5.28778 | gap 1, opp_overlap 400522 400525, overlap 400521 ATTATCGATAAAAAA GGCCCGCTCAA TAAC CCG-GCGGACC GCGATCACTGTATCC prpD 399502 - 400953 + | PrpD protein prpE 400994 - 402880 + | PrpE protein TERM 490 402973 - 402955 - T 93 -13.8 -3.5936 | TGTAAAGTCGGGAAA GGGCGGCA GCG CGCCGCCC TGTAACAGAATTAAC hemB 403958 - 402984 - | delta-aminolevulinic acid dehydratase TERM 491 404502 - 404488 - g 73 -5 -4.57569 | GCACTCCTGGAAAAA GAAACT TGT AGTCTC ACAATTAGCATTGGC yaiU 404471 - 407485 + | puative autotransporter/virulence factor TERM 492 407529 - 407552 + F 100 -15.4 -3.61715 | opp_overlap 407529 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 493 407552 - 407529 - f 100 -15.4 -4.81851 | opp_overlap 407529 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 494 408181 - 408153 - g 70 -5.4 -4.40298 | gap 1 ATTGAAATGAATAAA GGCAAACTGATCA GTAT TAACC-GTTTGCC CTCCGAATATTAACA yaiV 407571 - 408194 + | hypothetical protein ampH 409369 - 408239 - | penicillin-binding protein AmpH TERM 495 409287 - 409271 - G 70 -5.1 -4.4648 | overlap 409273 ACCGCTACCATAAAA GATATGC TCG GCATAAC GATCAACGATATCAG TERM 496 409885 - 409895 + G 81 -8.2 -4.2828 | overlap 409884 ATGAAGTGCCTATCA GCGC AGC GCGC TTTTGGTCGCTGGAC sbmA 409845 - 410963 + | SbmA protein TERM 497 411960 - 411942 - g 80 -8.8 -4.13767 | TGGCCGAGGCCAAAA CGGGCAAG ACG CTTGCGCG GGAAATGTTGCCCGG yaiW 410978 - 412072 + | putative lipoprotein yaiY 412418 - 412110 - | hypothetical protein yaiZ 412686 - 412901 + | hypothetical protein TERM 498 412921 - 412890 - T 90 -10.2 -4.21908 | gap 1, overlap 412892 GATGATGAGGTAAAA GACGCCCGATAAACG TTG CGCT-ATCGGGCGTG CGGTATTACATCGTG TERM 499 412919 - 412892 - T 93 -12.8 -3.70674 | gap 1, overlap 412890 TGATGAGGTAAAAGA CGCCCGATAAACG TTG CGCT-ATCGGGCG TGCGGTATTACATCG ddlA 414021 - 412927 - | D-alanine:D-alanine ligase A TERM 500 414085 - 414073 - H 75 -6.2 -4.49311 | overlap 414062 ATTACCACGACAAAA CGCG GGTTT CGCG GGGTTCTGCCATAAT SEN0364 414099 - 414812 + | hypothetical protein TERM 501 415580 - 415590 + G 74 -4.6 -4.7078 | overlap 415581 AAGCGAACGCCTGAG CGGT AAA GCCG TTTTTGCGTCGTTAC TERM 502 415617 - 415627 + G 76 -3.2 -5.04249 | TTACCTTATCCTGCG CTGG TGA TCAG TTTGTTTTTTACCAC SEN0365 414981 - 416192 + | possible efflux pump TERM 503 416200 - 416225 + F 93 -16.3 -3.03781 | overlap 416195 GCCAATAGCGGTGCA TCGTAACGGCA CTTC TGCCGTTACGA TATGGTTTAAATTAA yaiB 416483 - 416749 + | hypothetical protein TERM 504 416803 - 416859 + F 100 -21.3 -2.82635 | TATAAAATAGCCCTG GCCGCTTCGTTTTTATTTTGCTCTG TATTAAC CAGAAGAAAATAAAAACGAAGCGGC TATGGTAATAACAGT psiF 417098 - 417418 + | phosphate starvation-inducible protein PsiF yaiC 417510 - 418622 + | adrA protein proC 419446 - 418637 - | pyrroline-5-carboxylate reductase yaiI 419586 - 420041 + | hypothetical protein aroL 420226 - 420771 + | shikimate kinase II TERM 505 420864 - 420852 - g 74 -4.7 -4.68593 | GTCACCATTGAAAAA GGCAC GCC GGGCC AGACGGTGACGTGGT yaiA 420798 - 420989 + | hypothetical protein aroM 421240 - 421917 + | AroM protein yaiE 421988 - 422272 + | hypothetical protein TERM 506 422277 - 422306 + T 81 -12.9 -2.72344 | gap 1, overlap 422278 GCTATTTGTAACGGT GA-GTCCCCTCTCC GGC GGAGAGGGGCCCTC TGGTTAGCGCTGCGC TERM 507 422278 - 422304 + T 79 -12.2 -2.90723 | overlap 422277 CTATTTGTAACGGTG AGTCCCCTCTCC GGC GGAGAGGGGCCC TCTGGTTAGCGCTGC rdgC 423221 - 422310 - | recombination associated protein RdgC TERM 508 422947 - 422959 + g 74 -7.7 -4.13767 | overlap 422949 CGTCCCTGATCGGCT TCCAG TTT CTGGA TTTTCGCCTCCAGAG TERM 509 424134 - 424156 + G 77 -4.8 -4.85782 | opp_overlap 424134 AGCGCCTGTACAAAA CGGTTCCGTC GCT GATGAAATCG TTTGTTTTTGGCGGC yajF 423347 - 424255 + | hypothetical ROK-family protein araJ 425449 - 424277 - | transmembrane efflux protein TERM 510 424489 - 424499 + g 77 -8.2 -4.07568 | overlap 424487 CGCCCAGCAGTTCGC CGCC TTT GGCG TTTTGCAGCAGCAGG TERM 511 424983 - 424973 - G 74 -2.4 -5.1356 | CGCGATCAATAAAAA GGTG TAG CGCC AGCTAAATTCCTGGC TERM 512 425170 - 425129 - G 77 -3.5 -5.0538 | gap 1, overlap 425130 425131 GCCGACGCCAAAAAA GGCGCCGTGCGGAAAGCCGG AAA CCAGTCTGCCG-ACGGCGAG CATCAGATATGACGA sbcC 428762 - 425622 - | exonuclease SbcC TERM 513 425937 - 425919 - G 71 -10.2 -3.28712 | TTCGCCGCCTGATAA CGTTCGCG TAT CGCGCACG GCGTCGGCCTGCCAG TERM 514 426854 - 426800 - G 76 -10.6 -3.75153 | opp_overlap 426838 GCGCTGGAAGGGAAA GCGTATACTGCGCCAAATCAGCCGTC AGC GACGCCTGACGCTGCGCAATCTGCGC GGTAAAGCGCGCTAC TERM 515 427768 - 427798 + g 73 -9 -3.85817 | gap 1, overlap 427792 TGTCGATGCGCGCAG GCGCGGATACGCC GGCGCA GGCG-ATACGCGC TTTGTAAGCGAGCAT TERM 516 427921 - 427937 + g 77 -4.4 -4.83615 | gap 1, opp_overlap 427917, overlap 427920 427934 GCCAGAGTCAACGCC GCG-AGC TGCG GCTGCGC TTTTTCTCGCGCCTC TERM 517 428040 - 428063 + g 84 -8.8 -4.24075 | opp_overlap 428027, overlap 428041 AAGGTGCTGCTGCTG TACCTGCTGG TCGG CCAGCAGGCG TTTCTCTTCGTCAGT sbcD 429961 - 428759 - | exonuclease SbcD TERM 518 429833 - 429817 - G 72 -3.7 -4.73388 | AACCGGTATCAAAAA TATCGCC AGC GACAATA ATGGCATCCACCTGA phoB 430176 - 430865 + | phosphate regulon transcriptional regulatory protein PhoB TERM 519 430867 - 430908 + F 100 -15.3 -3.85389 | gap 1 CGACCCGCTTTTAAT GCCTTTTCCGCCAGTAGAAC ACA GGTTT-CTGGCGGAGAAGGC TTTCCATTCTTGAGG TERM 520 430995 - 431011 + G 100 -6.5 -5.69379 | CTCTGTTGCATCCCC GCGCTTA TCC TTAGCGC TTTTTTTGGTTATCT TERM 521 431422 - 431407 - g 74 -4.6 -4.68593 | CCCAGTATTTAAAAA CGCGTG ATTT CACCCG TCCGCTTCATTTGGT phoR 430935 - 432230 + | phosphate regulon sensor protein PhoR TERM 522 432257 - 432278 + F 100 -13.1 -4.90525 | opp_overlap 432260 AAGTATAACTTTCCA TAAGCCAGC GGAT GCTGGCTTA TTTTCTTTGCAGTTA TERM 523 432275 - 432260 - f 77 -10.4 -3.31799 | opp_overlap 432257 TATAACTTTCCATAA GCCAGC GGAT GCTGGC TTATTTTCTTTGCAG TERM 524 432303 - 432319 + F 80 -9.5 -3.98747 | CAGTTAAGACGGGCT CGTTGAA ACA TTCAACG TTTGGTGATTTTTTG TERM 525 432931 - 432956 + G 74 -9.7 -3.61654 | gap 1 TCGGGCCGTTATTTG CGACGCCG-CGT ACC GCGACGGTGTCG TTTGAGGTCGGTATC brnQ 432639 - 433958 + | branched chain amino acid transport system II carrier protein TERM 526 433980 - 434002 + F 100 -16.3 -5.64304 | opp_overlap 433983 TGACATATGTGTACA CCACGGGGC TTAAC GCCCCGTGG TTTTTTATTGTGTTG TERM 527 433999 - 433983 - f 71 -10.8 -2.63301 | opp_overlap 433980 CATATGTGTACACCA CGGGGC TTAAC GCCCCG TGGTTTTTTATTGTG proY 434033 - 435403 + | proline-specific permease ProY TERM 528 435766 - 435723 - g 75 -11.6 -3.36515 | gap 1, overlap 435721 GGCGATGCGCAAACA GCGCCGCCAGCCGCAGCCG GGCGTGA CGGC-GTGGCGAGCGACGC TCAATATCGCGTTAG TERM 529 436150 - 436138 - g 76 -3.3 -5.0538 | CCGTATCTGAAAAAA CTGGG TGT CACAG CGCTATATCTGAATC TERM 530 437145 - 437122 - g 81 -12.4 -3.57462 | CAGCGTATGGCGAAA CTGCGCCAGA GCAG TCTGGCGCTG CGTCGTGGCGGATGC malZ 435565 - 437382 + | maltodextrin glucosidase TERM 531 437435 - 437418 - T 100 -12.7 -5.28176 | opp_overlap 437418 CTCACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT TERM 532 437418 - 437435 + T 100 -12.7 -4.42653 | opp_overlap 437418 CTCACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT SEN0385 438056 - 437454 - | probable peroxidase TERM 533 438173 - 438200 + r 76 -7.8 -4.36914 | TTTTGCCTATCGATC GGGTCATTATAA ATCG TAATGATGACCC TTTTATGACAGCGAA yajB 438847 - 438266 - | hypothetical protein TERM 534 439484 - 439457 - g 76 -5.4 -4.70659 | gap 1, opp_overlap 439461 439472, overlap 439458 439459 GTCTACAGTGAAAAA CCGGGCGCCGTCG CCG CGCCGAC-CGCGG GGCTGCACTTTGATG queA 438941 - 440005 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 535 440222 - 440255 + G 76 -9.6 -3.79251 | gap 1, opp_overlap 440221 ATTTGAGTTAGATAC CACC-GATGGTCGCG CGCGT CGCGGTCGTCTGGTG TTTGATCGTGGCATA tgt 440202 - 441329 + | queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase yajC 441352 - 441684 + | hypothetical protein TERM 536 441851 - 441821 - g 89 -13.4 -3.53091 | gap 1 ATCCGGCTGTTCAAA TCACTGGCGTGCG CGGCGT CGC-CGCCAGTGA GCAAACGCTGATCCA secD 441712 - 443559 + | protein-export membrane protein SecD TERM 537 444533 - 444509 - g 76 -5.6 -4.72486 | opp_overlap 444512 444513 CAGAAAGTCGAAAAA GAAGGGGCGG ATCAG CCGTCCATTC TGCCGTAAACACGTA secF 443570 - 444541 + | protein-export membrane protein SecF TERM 538 444566 - 444585 + F 100 -10 -6.02914 | TAAGTGTTATCTGAA TCCCGGTC ATAC GATCGGGA TTTTTTTTATGTACC SEN0392 444686 - 445051 + | hypothetical protein TERM 539 445477 - 445487 + G 74 -8.2 -3.9749 | overlap 445476 GTACATCTCCACATT CGCG CAG CGCG TTTGATCTTATCCAT SEN0393 445077 - 445769 + | putative deoR-family transcriptional regulator yajD 445939 - 446286 + | hypothetical protein TERM 540 446298 - 446284 - T 72 -2.8 -5.06961 | ATGAACAAAAAGAAA TAAGCA GGC TGCTGA CAAAGTTGTTGGTGC TERM 541 446469 - 446488 + T 100 -6.4 -6.20267 | ACATTGTCACTGGAA TCCCGATC GCAA GGTTGGGA TTTTTTTGTTTTTAA TERM 542 446658 - 446617 - T 76 -5.2 -4.78848 | opp_overlap 446620 GCTGGAAAGAGAAAA CCCCCGC-ACATTGTTCGGT ATTC ACCGG-CAACATTACGGGGG CTAACTTGACCCTAG TERM 543 446881 - 446902 + T 100 -10.1 -5.07107 | opp_overlap 446880 446879 CATGCGCCCGAAACG GGCCAGAAG ACGA CCTCTGGCC TTTTTTGCAGGTTTA tsx 447778 - 446915 - | nucleoside-specific channel-forming protein tsx precursor TERM 544 447831 - 447821 - R 74 -6.8 -4.21812 | opp_overlap 447821 CGGGAGTGAAAAGAA CGCA ATT TGCG TTTCTAAATATTTCG yajI 448617 - 448078 - | putative lipoprotein ybaD 448769 - 449218 + | hypothetical protein TERM 545 449431 - 449408 - g 70 -6.6 -4.07687 | opp_overlap 449414, overlap 449414 449415 ATGGCGGGCGCAAAA GCCAAAGGCG CAAC CGCCTATGTC ACGCTTGAACCCTGT TERM 546 449425 - 449414 - g 71 -7.2 -3.92659 | opp_overlap 449414, overlap 449408 449415 GGCGCAAAAGCCAAA GGCG CAAC CGCC TATGTCACGCTTGAA ribD 449222 - 450325 + | riboflavin biosynthesis protein RibD TERM 547 450838 - 450822 - g 74 -7.9 -4.17132 | overlap 450823 450831 AAAGCCGGTAATAAA GGCGCAG AAG CTGCGCT GACCGCGCTTGAAAT TERM 548 450837 - 450823 - g 72 -11.4 -3.09556 | overlap 450822 450831 AAGCCGGTAATAAAG GCGCAG AAG CTGCGC TGACCGCGCTTGAAA ribH 450414 - 450884 + | 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase beta chain) nusB 450905 - 451324 + | N utilization substance protein B TERM 549 451331 - 451373 + F 88 -5.6 -5.61277 | gap 2, opp_overlap 451340 451344, overlap 451361 AAAAAGTGATTCACA GGCCGGAAAGATAGCGGG CGATCGATA CCCGCCGTCT--CCGGCC TTTTCTTTTTTTCTG TERM 550 452325 - 452343 + G 70 -6.7 -4.18018 | opp_overlap 452336 GGATCGCCTTTGTGC GTGACGG AGAAC CTGTCAC TTTTGACTGGAAAGG thiL 451403 - 452383 + | thiamine-monophosphate kinase pgpA 452361 - 452876 + | phosphatidylglycerophosphatase A yajO 453954 - 452980 - | putative oxidoreductase TERM 551 453220 - 453241 + g 73 -5.3 -4.57569 | gap 1 TATTTGCGCATCATT TTTAT-CGCT TTC AGCGTATAAA TTTTTGCCCACGTCA TERM 552 453417 - 453438 + g 76 -5.2 -4.82901 | gap 1, opp_overlap 453421, overlap 453421 GATCCTGCATGGTGA CAA-ACGGC GCCCA GCCGTGTTG TTTTTGTAGCGCCAG dxs 455873 - 454011 - | 1-deoxyxylulose-5-phosphate synthase TERM 553 455444 - 455394 - G 71 -9.8 -3.54543 | gap 3, opp_overlap 455394 455393 455391 455441 ATTCATTGCTTCAAA CGCCATACCGGC-G-GTGA-TGGCG CCGT CGCCAATCACACAGACGGTGCGGCG ATCTTTGCCTTCTTT ispA 456796 - 455897 - | geranyltranstransferase TERM 554 456232 - 456251 + g 71 -12.1 -2.53271 | overlap 456231 456230 CGCCAAGTCTAACGG CGGCGCG AATGAG CGCGCCG GTCTTATGGCGATGA xseB 457039 - 456797 - | exodeoxyribonuclease small subunit TERM 555 457432 - 457422 - g 75 -6.8 -4.49756 | overlap 457423 CGCCAAAGATGAAAA CCAG CGT CTGG CGATTCGCGACGCGC thiI 457249 - 458697 + | thiamine biosynthesis protein ThiI phnV 459538 - 458741 - | probable membrane component of 2-aminoethylphosphonate transporter phnU 460401 - 459532 - | probable membrane component of 2-aminoethylphosphonate transporter TERM 556 460042 - 460030 - G 73 -5.5 -4.57482 | TGACCCATAAATAAA GGTGA ACG CCACC GTAATCAGGAAGGTC phnT 461513 - 460404 - | probable ATP-binding component of 2-aminoethylphosphonate transporter phnS 462463 - 461519 - | probable periplasmic binding component of 2-aminoethylphosphonate transporter TERM 557 461795 - 461815 + g 93 -12.5 -4.05446 | opp_overlap 461794 461791 AATGACATAAGGGAT GGCCAGCGC GCT GCGCTCGCC TTTGTCGTTGGCCGG phnR 463449 - 462730 - | probable regulator of 2-aminoethylphosphonate uptake and metabolism operon TERM 558 463133 - 463148 + g 75 -6 -4.65895 | opp_overlap 463131, overlap 463131 ACGGTGGTTAACACG CCGCTC AGTA GCGCGG TTTTTGGCTCCCGCC phnW 463589 - 464692 + | 2-aminoethylphosphonate:pyruvate aminotransferase phnX 464699 - 465511 + | phosphonoacetaldehyde phosphonohydrolase TERM 559 465533 - 465581 + T 88 -12.5 -3.53444 | overlap 465525 465535 465536 TGCCGGATGGCGCTG CCGCTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGGTG TTTACGCCGCCATCC TERM 560 465535 - 465579 + T 90 -13.7 -3.34517 | overlap 465533 465536 CCGGATGGCGCTGCC GCTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGG TGTTTACGCCGCCAT TERM 561 465536 - 465578 + T 100 -17.2 -2.60496 | overlap 465535 465533 CGGATGGCGCTGCCG CTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAG GTGTTTACGCCGCCA thiJ 466198 - 465608 - | 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein apbA 467072 - 466161 - | 2-dehydropantoate 2-reductase yajQ 467180 - 467689 + | hypothetical protein yajR 469100 - 467736 - | hpothetical major facilitator family transport protein TERM 562 469061 - 469084 + g 70 -5.3 -4.51097 | gap 1 TCCCTAAACCCCATG TGGCGCGCAG CTCCC CTG-GCGTCA TTTTATAATCGTTCA TERM 563 469546 - 469561 + H 74 -8.2 -3.85698 | TGATAGCAAACTTTC CGCGTG ATGG CGCGCG TTTATCAGGCAGAAG TERM 564 470119 - 470129 + G 91 -2.4 -5.88471 | AAATAATAGGCCAGA GAGC GAT GCGC TTTTTTTTAGTCGTA TERM 565 470338 - 470324 - g 73 -5.6 -4.56597 | opp_overlap 470311 GCCGCCGCGGAAAAA GGCGTC GTT GAGGCC CAATCTCTCTTGGGG TERM 566 470783 - 470768 - g 91 -7.6 -5.055 | overlap 470757 GTAACTCTGAAAAAA GAGAGA ATTT TCTCTC GCGGGATAACGGCTA SEN0419 469625 - 471136 + | hypothetical protein TERM 567 472701 - 472681 - T 100 -11.1 -5.68039 | opp_overlap 472681 AAATGGATAAAAAAA CCGCCGTTT GTG ACACGGCGG TTTTTTCAATAGCAA TERM 568 472681 - 472701 + T 100 -11.1 -5.08824 | opp_overlap 472681 AAATGGATAAAAAAA CCGCCGTTT GTG ACACGGCGG TTTTTTCAATAGCAA cyoE 473613 - 472723 - | cytochrome o ubiquinol oxidase C subunit cyoD 473954 - 473625 - | cytochrome o ubiquinol oxidase C subunit TERM 569 473738 - 473709 - G 74 -10.1 -3.62572 | opp_overlap 473735 GATCAGCACGGTAAA GATGAAGGCCG TCATGTTC CAGCCTTCATC AGATTTGGTGTTCAT cyoC 474469 - 473954 - | cytochrome o ubiquinol oxidase subunit III cyoB 476549 - 474558 - | cytochrome o ubiquinol oxidase subunit I TERM 570 474603 - 474614 + g 75 -5.8 -4.66833 | opp_overlap 474602 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGACTTCCGG TERM 571 476488 - 476447 - G 95 -14.5 -3.46081 | opp_overlap 476447, overlap 476481 TACCGAAGTAAGTAA TCGCTGCCAGTATCGCCAG TCCC CCGACGATAATTGCAGCGA TCGTTACCATGACGA cyoA 477516 - 476560 - | cytochrome o ubiquinol oxidase subunit II TERM 572 477051 - 477036 - G 95 -11.8 -4.42806 | opp_overlap 477045 TCACTTTGAAATAAA CCGGCG TGTT CGCCGG GAAGGCGATCTCGTT TERM 573 477128 - 477141 + g 70 -3.1 -4.77036 | opp_overlap 477123, overlap 477129 TCCATGGAAACCACT TCGAT GGTG ATCGG TTTTTCGTCATGCGC ampG 479444 - 477969 - | AmpG protein TERM 574 478038 - 478025 - G 71 -8.1 -3.81755 | ACCCGCCAAAGACAA TGCCG CACA CGGCA ACCGCTACCGCAGTC TERM 575 478488 - 478500 + g 74 -3.4 -4.88736 | AAAGACCGCCGCGCC CATG CTGAA CATG TTTTTATCGGTAATG TERM 576 478810 - 478795 - G 73 -6.1 -4.42806 | opp_overlap 478804 TTACGGCCAAAGAAA TCGCG TAGCGG CGCGA CGACGGCCTGTTCCA TERM 577 479456 - 479475 + r 100 -15 -4.03167 | opp_overlap 479458 ACATAGGCATCTACA GACCCGGC TTCT GCCGGGTC TTGTTGTTGCTATTA TERM 578 479473 - 479458 - R 77 -11.8 -2.92091 | opp_overlap 479456 ATAGGCATCTACAGA CCCGGC TTCT GCCGGG TCTTGTTGTTGCTAT yajG 480120 - 479488 - | putative lipoprotein TERM 579 480504 - 480524 + G 86 -7.5 -4.73613 | overlap 480499 GGTCGTGCTGGTGAG CGATCGCTT TAC AGGCGAACG TTTTCTTAATCGTCA bolA 480370 - 480687 + | BolA protein TERM 580 480743 - 480766 + F 93 -9.6 -4.59984 | opp_overlap 480748, overlap 480748 GCTACAGAATTATGT GAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGAATTTT TERM 581 480761 - 480748 - f 83 -9.5 -4.17425 | opp_overlap 480743 480748 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGA TERM 582 480748 - 480761 + F 100 -9.5 -5.23292 | opp_overlap 480748, overlap 480743 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGA tig 481034 - 482332 + | trigger factor TERM 583 482389 - 482368 - f 100 -12.3 -4.86033 | opp_overlap 482368 AAATTTGCACAAAAA CCCGTCACC TTTC AGTGACGGG TTTTTTTTTGTCACG TERM 584 482368 - 482389 + F 100 -11.6 -6.22802 | opp_overlap 482368 AAATTTGCACAAAAA CCCGTCAC CTTTCA GTGACGGG TTTTTTTTTGTCACG clpP 482580 - 483203 + | ATP-dependent clp protease proteolytic subunit clpX 483455 - 484726 + | ATP-dependent clp protease ATP-binding subunit ClpX TERM 585 484754 - 484782 + F 80 -6.7 -4.8048 | opp_overlap 484759, overlap 484759 ACAATCAGTTAGCCA AAAAAGGGGGGAT TTT ATCTCCCCTTTCG TTTTTCCTGTAAACA TERM 586 484759 - 484777 + F 91 -11 -4.3623 | opp_overlap 484759, overlap 484754 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 587 484777 - 484759 - f 100 -8.8 -5.09895 | opp_overlap 484759 484754 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 588 485081 - 485060 - g 89 -2.9 -5.67967 | overlap 485063 ACCATGATAAAAAAA TCATGCTGG TCGC CCAGAAGGA AGCATCGACGGATGA TERM 589 485364 - 485354 - g 100 -5.4 -5.80364 | overlap 485355 AGCTGAACAAAAAAA TTCC GCC GGAA GTGCTGACGTCACTC TERM 590 485858 - 485845 - g 76 -3.1 -5.10029 | gap 1, overlap 485835 485847 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTCGA TERM 591 485863 - 485847 - g 80 -9.4 -4.17355 | overlap 485835 485845 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTCGATACTG TERM 592 486907 - 486895 - g 70 -3.3 -4.72986 | GACTTTTACGAAAAA CGCGA TAT CCACG TTCACGTGCCGGAAG lon 484912 - 487266 + | Lon protease TERM 593 487299 - 487328 + F 100 -8.6 -5.72616 | gap 1, opp_overlap 487298 487299 CGCTAATAAAAACAG GGCTGGCAGG-CT ATTTC GGACTTGCCAGCC TTTTTTTGTATAGCT hupB 487475 - 487747 + | DNA-binding protein HU-beta TERM 594 487783 - 487802 + F 100 -10 -5.45652 | opp_overlap 487782 487783 GTGGCAAAGTACAAG GGCGCATC AACT GATGTGCC TTTTTTATTGGCGAT TERM 595 488406 - 488394 - g 70 -9.1 -3.70674 | overlap 488392 TGAGCAGGTAAAACA GGCGA TTT TCGCC ACTCCCGCTTTTCAG TERM 596 488937 - 488919 - g 76 -11.8 -3.07947 | overlap 488911 488910 GAACAAGGGCGAAGA TTTCGCCA CGC TGGCGAAA GAGAAATCTACCGAT TERM 597 489058 - 489043 - g 93 -4.6 -5.50723 | opp_overlap 489043, overlap 489044 GGATTAAAAGAAAAA GGCCAG ATAT CTGGCG TGATTAAGTCGTCTG TERM 598 489057 - 489044 - g 71 -8.1 -3.88807 | opp_overlap 489043, overlap 489043 GATTAAAAGAAAAAG GCCAG ATAT CTGGC GTGATTAAGTCGTCT TERM 599 489817 - 489796 - g 90 -5.1 -5.27923 | gap 1 GAAGCGCAGAAAAAA GCGATGGTGC AGG GCATCA-CGC AGAACAATGCGCAAA cypD 488038 - 489909 + | peptidyl-prolyl cis-trans isomerase D TERM 600 489957 - 489972 + F 100 -11.8 -4.39571 | opp_overlap 489957 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG TERM 601 489972 - 489957 - f 95 -11.8 -3.89346 | opp_overlap 489957 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG ybaV 490059 - 490433 + | hypothetical protein TERM 602 490469 - 490491 + F 73 -10.7 -3.00601 | overlap 490464 490471 ATTTGCCAGACTGTA GAGGTCATA CCAGT TATGACCTC TGTACTTGTCGTTTA TERM 603 490827 - 490851 + G 70 -2.7 -4.69415 | overlap 490828 GGAGCCAGAAGGGCA GGTGGTGGCCG ATG CGCTCATCACG TTTGTTTGTATTGAT ybaW 490537 - 490935 + | hypothetical protein ybaX 491736 - 491041 - | hypothetical protein ybaE 493264 - 491801 - | putative solute-binding protein TERM 604 493063 - 493051 - G 76 -3.3 -5.055 | TTAACCCGGAAAAAA CTTGC CCT GCGAG ATGCTGTTCCGCGCG TERM 605 493510 - 493520 + H 74 -5.4 -4.68545 | GCCTCATAGAAACCC GGAA CAC TTCC TTTTATCTGTTCACT cof 493602 - 494420 + | hypothetical protein TERM 606 494438 - 494456 + T 100 -10.3 -6.0458 | opp_overlap 494438 GATCTCTTCCAGCAA GCCAGAC ATTCA GTCTGGC TTTTTTTTGGTTTCT TERM 607 494456 - 494438 - T 74 -10.3 -3.14344 | opp_overlap 494438 GATCTCTTCCAGCAA GCCAGAC ATTCA GTCTGGC TTTTTTTTGGTTTCT SEN0440 495525 - 494470 - | putative lyase TERM 608 495171 - 495198 + g 86 -10.8 -4.13767 | AATGACAGTGGCCGC CGTAAAATTGAA TCTG TTCGATTTTACG TTTTGCGGTACAGGC ybaO 495638 - 496096 + | hypothetical transcriptional regulator TERM 609 496854 - 496838 - g 86 -6.5 -5.07486 | opp_overlap 496842 496847 496848, overlap 496841 TACCGGCAAGAAAAA TATGCGC GTG GCGCGTA TTGACGCGCGTTTTG TERM 610 496847 - 496864 + G 74 -6.9 -4.25283 | opp_overlap 496841 496838, overlap 496842 496848 GAAAAATATGCGCGT GGCGCGT ATTG ACGCGCG TTTTGATCCAACCAT TERM 611 497374 - 497393 + G 90 -5.7 -5.18726 | gap 1, overlap 497365 GGCGTAGCCGACTGG CGGTCGTC AGCCA GACG-CCG TTTTTGTTCTCGGAC mdlA 496137 - 497909 + | putative ABC transporter ATP-binding membrane protein TERM 612 498059 - 498074 + G 70 -9 -3.66178 | opp_overlap 498059 498057 ATTTCATTGATAACA TGGTGG CCCG CCACCA TTTACCGTTGGGCAA mdlB 497941 - 499683 + | putative ABC transporter ATP-binding membrane protein TERM 613 499718 - 499734 + F 89 -6.5 -5.30616 | overlap 499719 AAGCCTCGCCCATTA TGCACCG TCG TGGTGCG TTTTTCTTTCCCTGC glnK 499896 - 500234 + | nitrogen regulatory protein P-II TERM 614 500707 - 500719 + G 80 -5.5 -4.93898 | GAGCGTATTCGTTTT TCGGC GGT GCTGA TTTTTGTCGTGGTGT amtB 500266 - 501552 + | probable ammonium transporter TERM 615 501644 - 501632 - T 70 -10.5 -2.50113 | opp_overlap 501631 501630, overlap 501609 501631 CATCAGGCCATTAAC GCCGC ATA GCGGC ACGTTTTTTAATTGT tesB 502512 - 501652 - | acyl-CoA thioesterase II TERM 616 502131 - 502154 + g 85 -4.4 -5.27779 | overlap 502135 CTGACGGTAGTCCTT CCGGCCCGAC TGCT GTCGGCATGG TTTTTTGATGTTCAA TERM 617 502611 - 502597 - H 72 -5.7 -4.38712 | CCGATGGGTACAAAA GTCTG AATAA CAGAC CAATTCCAGGCAAAA ybaY 502727 - 503296 + | conserved hypothetical lipoprotein TERM 618 503308 - 503328 + T 100 -16.9 -3.14132 | opp_overlap 503298 503297 TTAATCCTGCGCCAA CCCTCTCCG TTA CGGAGAGGG TTAATACACCCAGCG ybaZ 503718 - 503329 - | putative methylated-DNA methyltransferase ylaB 505499 - 503949 - | hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequence TERM 619 504492 - 504517 + g 80 -8.9 -4.15044 | GGTGTCGATGATTAG CCGGGTTAGCG GCTC CGTGAGCCCGG TTTGTTCAGCCAGCG TERM 620 504553 - 504542 - G 74 -3 -4.84359 | opp_overlap 504547 CCAGCGCGATAAAAA TTTC CGGC GAAA GGAAAGTGCCGTCCG rpmE2 505724 - 505984 + | putative 50s ribosomal protein L31 (second copy) rpmJ2 505990 - 506130 + | putative 50s ribosomal protein L36 (second copy) TERM 621 506155 - 506178 + T 100 -10.3 -5.4505 | opp_overlap 506155 GGTTCAGGGAAAGCA GTGCGTACC AGGGAG GGTGCGCAC TTTTTTATTACCGGC ylaC 506656 - 506186 - | hypothetical protein maa 507325 - 506774 - | maltose O-acetyltransferase TERM 622 507270 - 507303 + g 100 -3.8 -5.95286 | overlap 507273 TCCTGGCATAAAGTT TCATCGGTCGGGCA ATACAG TGCCCCAGCGATCA TTTTTTGTTTTTCGT hha 507722 - 507504 - | haemolysin expression modulating protein ybaJ 508124 - 507750 - | hypothetical protein TERM 623 508601 - 508586 - R 100 -11.8 -5.00616 | opp_overlap 508586 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC TERM 624 508586 - 508601 + r 82 -11.8 -3.30124 | opp_overlap 508586 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC acrB 511769 - 508620 - | acriflavin resistance protein B TERM 625 509550 - 509564 + g 76 -5.6 -4.77438 | opp_overlap 509549 GTCGCTAATAGACAC GCCCAG CGC CTGAGC TTTTTCCTGGTCGAT TERM 626 511643 - 511682 + g 74 -10.8 -3.57144 | overlap 511644 TTGCGGAGATCGTCA CTGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCAA TTTGAGGATCGCGAG TERM 627 511644 - 511681 + g 83 -14.3 -2.74144 | overlap 511643 TGCGGAGATCGTCAC TGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCA ATTTGAGGATCGCGA acrA 512985 - 511792 - | acriflavin resistance protein A precursor TERM 628 512956 - 512974 + g 90 -6 -5.17744 | opp_overlap 512952 CATCAGAACGACCGC CAGAGG CGTTAAC CCTCTG TTTTTGTTCATATGT TERM 629 513717 - 513697 - g 70 -3.1 -4.8236 | overlap 513699 GATTTAAAAAAAGAA GCTCGCGCC TAC GTCACGATC CTGCTGGAGATGTAT acrR 513127 - 513780 + | potential acrAB operon repressor TERM 630 513786 - 513806 + F 72 -4.8 -4.61868 | gap 1, opp_overlap 513786 513784 513787, overlap 513786 513787 CTCCCCCTGATAATA T-TCCAGGA AAAC TCCTGGACA TTTTCTGTGTCGCTA TERM 631 514715 - 514701 - g 90 -5.6 -5.15969 | opp_overlap 514701 514702, overlap 514702 CGCTAACGGAAAAAA CGGCCC AGG AGGCCA TTTCGCCGGACGAAA TERM 632 515200 - 515183 - g 70 -5.5 -4.47183 | GATCAGCTAAATAAA CAGTTGG GTAA CCAGCTG ATGATGGCGATTAAC TERM 633 515269 - 515282 + G 74 -2.4 -5.08824 | opp_overlap 515264 AAATCTGAAAGCCAT TCTG ACGCAG CAGA TTTTTTGGGTGAACA aefA 513899 - 517261 + | integral membrane protein AefA SEN0460 518238 - 517303 - | hypothetical protein TERM 634 517419 - 517446 + g 91 -9.8 -4.57341 | overlap 517411 517442 517443 GCGCTTCGGCCTCTC GGCCTTGTGCTA ACCC TTGCTCAAGGCC TTTTTGCAGGCCCTT TERM 635 517561 - 517579 + g 71 -8 -3.8901 | opp_overlap 517560 CAGTTGACGAATTAG CGCCCCGG GTT CTGCGGCG TTTCCTGCTTTCAAC ybaM 518475 - 518308 - | hypothetical protein priC 519004 - 518489 - | primosomal replication protein N ybaN 519085 - 519462 + | putative conserved membrane protein TERM 636 519467 - 519456 - f 71 -3.6 -4.89562 | TGAAAAGCAACAAAA GCGC TGAA GCAC ACGAATCGCTGTTGC apt 519615 - 520166 + | adenine phosphoribosyltransferase TERM 637 520203 - 520227 + F 100 -16.5 -3.09671 | opp_overlap 520203 520206, overlap 520206 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 638 520227 - 520203 - f 88 -14.3 -3.0094 | opp_overlap 520203 520206, overlap 520206 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 639 520224 - 520206 - f 79 -10.2 -3.64912 | opp_overlap 520203 520206, overlap 520203 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 640 520206 - 520224 + F 93 -12.4 -3.69069 | opp_overlap 520206 520203, overlap 520203 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 641 521600 - 521573 - g 75 -11.2 -3.37016 | gap 1, opp_overlap 521575, overlap 521568 ACAAAAAAGAGTGAA CCGGCAGC-CGCA TCC CGCGCGCGGCCGG TGAATAACTCTGCGC TERM 642 521806 - 521793 - g 90 -5.2 -5.1861 | overlap 521794 TGGAGCATGAAAAAA CGCC GGAGCT GGCG GCTAAACTGGCGGCG TERM 643 522007 - 521989 - g 74 -6.7 -4.25104 | gap 1 CGGCGCGCAGCAAAA GCTG-GCG CAAG CGCTCAGC GATCTGACGGGAACG TERM 644 522124 - 522107 - g 74 -6.9 -4.24075 | opp_overlap 522104 522107 ATTTATGAAGAGAAA CTCGCGC AAGC GCGTGAG TCAATTATTGCGGAT TERM 645 522185 - 522145 - g 73 -9 -3.7941 | gap 1, opp_overlap 522148 TATTGCGGATAATAA CATTCAGACGCTGCGTCGA TTCT TCGACGCCGAG-CTGGATG AAGAGAGTATCCGCC dnaX 520280 - 522208 + | DNA polymerase III subunits gamma and tau TERM 646 522209 - 522227 + F 73 -9.6 -3.30124 | ATCCGCCCCATTTGA TCGTAAGC CTG GCTTGCGA TTGTGAACCATCAAG TERM 647 522327 - 522315 - g 79 -3.4 -5.17353 | AGATGCAGGAAAAAA TGCA GAAAA TGCA GGAAGAGATTGCGCA ybaB 522254 - 522583 + | hypothetical protein TERM 648 523003 - 522992 - g 85 -4.4 -5.24129 | overlap 522993 522995 522996 TGGCGTCAGAAAAAA TCAG CGAG CTGA TCCTCGCGACCAACC recR 522583 - 523188 + | recombination protein RecR TERM 649 523217 - 523194 - f 100 -13.8 -4.1552 | TATTTTCTGAACAAA CGGAGGCGGC ATTC GCGGCCTCCG CTTGAAATCACACCC htpG 523299 - 525173 + | heat shock protein HtpG TERM 650 525360 - 525388 + F 84 -5.2 -5.31877 | gap 1, opp_overlap 525327 525371, overlap 525361 CGAGTACTGTTTGTA GGCCGGATAAGCG CCAG CGCC-ATCCGGCA TTTTTTATAATACCT TERM 651 525361 - 525387 + F 72 -8.7 -3.78042 | gap 1, opp_overlap 525327 525371, overlap 525360 GAGTACTGTTTGTAG GCCGGATAAGCG CCAG CGCC-ATCCGGC ATTTTTTATAATACC adk 525531 - 526175 + | adenylate kinase TERM 652 526235 - 526193 - f 88 -14.3 -3.05384 | overlap 526233 TTTTCGCGTAGTGAA CCGCTTATCAGGCCTGC CATTATCCC GCAAGCCTGATAAGCGT AGCGCCATCAGGCAA TERM 653 527334 - 527289 - g 74 -2.5 -5.00616 | opp_overlap 527295 527298, overlap 527292 GCGGGCGGTAAAAAA TATGCGTACATTCCGGCGCTG AACG CGACGCCGGAACATATTGATA TGATGCTGAAACTCA hemH 526404 - 527366 + | ferrochelatase aes 528334 - 527363 - | acetyl esterase TERM 654 528389 - 528371 - H 80 -5.9 -5.07053 | opp_overlap 528370 AACCATTGTAAAAAA CGCGGCT GGAGA AGCTGCG ATCTCGTCGTCCGAT gsk 528487 - 529791 + | inosine-guanosine kinase ybaL 531516 - 529840 - | putative transport protein TERM 655 530484 - 530473 - G 77 -7.2 -4.30719 | opp_overlap 530460, overlap 530474 TCCGGCGAGAATAAA GGCG AACT CGCC GATTTGCGCCAGGCT TERM 656 530685 - 530665 - G 89 -3.1 -5.65927 | opp_overlap 530679, overlap 530668 530677 530678 GACGGAAACAAAAAA CAGGACGGC AAA GGCGTCGCG CAGCGGCAACGTATC TERM 657 530968 - 530985 + g 73 -5.5 -4.58395 | ATCGACTGCCAGCGA GGCTATG CCGA CATCGCC TTTTTCCACCATGCC TERM 658 531257 - 531201 - G 71 -10 -3.56092 | gap 1, overlap 531202 CCAGCACGGCGGAAA GCGCCATACCCAGCAGCGTCGCCACCG CTAT CTG-AGCGACAGCGCCGGGAATGGCGA TAGACTTTACCGCCA TERM 659 531256 - 531202 - G 79 -13.5 -2.73441 | gap 1, overlap 531201 CAGCACGGCGGAAAG CGCCATACCCAGCAGCGTCGCCACCG CTAT CTG-AGCGACAGCGCCGGGAATGGCG ATAGACTTTACCGCC fsr 532951 - 531731 - | fosmidomycin resistance protein TERM 660 532302 - 532312 + g 74 -6.8 -4.30448 | CGCGGCAGCGGGTTA GCGA TTA TCGC TTTTGGCTTGCCTTT TERM 661 534313 - 534331 + G 70 -6.7 -4.15565 | gap 1, overlap 534322 TTCTGGCTGCGCAGA TCGCGCGC ACCG GCGC-CGA TTTTGGCGTGATGAG TERM 662 534505 - 534495 - g 71 -8.2 -3.89956 | GTAGCACAGATGAAA CCGG ACT CCGG CGCCTATCCACAGTT ushA 533124 - 534785 + | UDP-sugar hydrolase ybaK 535381 - 534902 - | hypothetical protein TERM 663 535117 - 535133 + g 75 -5.8 -4.56597 | opp_overlap 535091 GTTGCGCCACCATCG GGTCGG CCATA TCGACC TTTTTCGCGCCCAGA TERM 664 535556 - 535577 + r 100 -7.3 -5.96894 | overlap 535557 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTATTTCAAT TERM 665 535557 - 535576 + r 87 -10.8 -4.15696 | overlap 535556 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTATTTCAA ybaP 536377 - 535583 - | hypothetical protein TERM 666 536436 - 536422 - R 95 -12.8 -4.36914 | opp_overlap 536435 GCGCGTTGGAGAAAA GGGCGC AAT GCGCCC TGACGGGACGTCAAC SEN0478 537290 - 536463 - | probable secreted protein TERM 667 537320 - 537331 + r 72 -3 -4.97159 | opp_overlap 537320 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTTATTTTT TERM 668 537331 - 537320 - R 82 -3 -5.48825 | opp_overlap 537320 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTTATTTTT TERM 669 537405 - 537440 + r 93 -9.8 -4.70879 | opp_overlap 537408 537438, overlap 537406 537407 537438 TTACTGATGGCTTAA TAATATATCAGGCAGC TGAT GCTGCCTGATATAGCG TTTTTACGCTTTCGG TERM 670 537406 - 537439 + r 79 -11.1 -3.41804 | opp_overlap 537408 537438, overlap 537405 537407 537438 TACTGATGGCTTAAT AATATATCAGGCAGC TGAT GCTGCCTGATATAGC GTTTTTACGCTTTCG TERM 671 537407 - 537438 + r 86 -14.6 -2.6436 | opp_overlap 537408, overlap 537406 537405 ACTGATGGCTTAATA ATATATCAGGCAGC TGAT GCTGCCTGATATAG CGTTTTTACGCTTTC TERM 672 537437 - 537408 - R 100 -18.1 -3.62597 | opp_overlap 537407 537406 537405 CTGATGGCTTAATAA TATATCAGGCAGC TGAT GCTGCCTGATATA GCGTTTTTACGCTTT copA 539945 - 537444 - | copper-transporting ATPase TERM 673 538767 - 538802 + g 74 -4.5 -4.7254 | opp_overlap 538754, overlap 538769 GACGCTGCCGTCCTG GACGACGGTGCCGGC ATGAAC GCTGTCGCCTTCGCC TTTTTGCTGCGGAAT TERM 674 538913 - 538945 + g 76 -3.4 -5.04987 | gap 2, overlap 538928 TAGTGAGCCGCAGCA GCAT-CC-CTGGCTGA ACG TCCGCCAGCGGGACGC TTTTTTCGCCGTCTT TERM 675 539469 - 539480 + g 83 -7.2 -4.57073 | overlap 539423 TTCAATCGCCTCTGC GCCG TAGC CGGC TTTTTCCACCGCCTG TERM 676 540095 - 540083 - g 95 -5.5 -5.40474 | ATGTGGCGAAAAAAA CCGGT TTA ACCAG CAAAGCCATTCGGTT cueR 540055 - 540471 + | copper efflux regulator ybbJ 540924 - 540472 - | hypothetical protein ybbK 541838 - 540921 - | hypothetical protein ybbL 541985 - 542662 + | putative ABC transporter ATP-binding protein ybbM 542649 - 543428 + | hypothetical protein TERM 677 543558 - 543535 - T 73 -9.5 -3.30441 | CAGTAGCGCGTACAA CTGGCGGCG GTATTT CGACGCCAG CGCATCGCCGGTGCC ybbN 544368 - 543514 - | thioredoxin-like protein ybbO 545198 - 544428 - | hypothetical oxidoreductase TERM 678 545106 - 545129 + g 70 -8.8 -3.75153 | AGGTTTGCGGCAGCC CGCCAGGATT TGAA AGCCCTGGCG TTTAAGTTCAAGCGC tesA 545967 - 545353 - | acyl-coA thioesterase I ybbA 545938 - 546624 + | hypothetical ABC transporter ATP-binding protein TERM 679 547340 - 547356 + G 70 -8.7 -3.64049 | overlap 547328 547351 547352 ATCGCTCGAACGTTC GCAGCAG TTT TTGCTGC TTTCGGCGTTATTAA TERM 680 547480 - 547456 - g 73 -5.5 -4.62069 | opp_overlap 547458, overlap 547457 547458 TGGCGATTTTAAAAA CGCTGGGCGCG GGC CGGGCCCAGTT GCGTAAACTTATTAT TERM 681 547458 - 547478 + G 81 -12.5 -3.08738 | opp_overlap 547457 547456 547458 GCGATTTTAAAAACG CTGGGCGCG GGC CGGGCCCAG TTGCGTAAACTTATT TERM 682 547478 - 547458 - g 75 -12.5 -2.61831 | opp_overlap 547458, overlap 547457 547456 GCGATTTTAAAAACG CTGGGCGCG GGC CGGGCCCAG TTGCGTAAACTTATT ybbP 546621 - 549035 + | hypothetical protein TERM 683 549052 - 549081 + F 85 -6.3 -5.14563 | opp_overlap 549052 549053, overlap 549053 549055 TCATGATGTGAATAA TTTCGCGCCGGTT TTTA AAACGGCGCGTAC TTTTTTAGTCGCACA TERM 684 549053 - 549080 + F 79 -9.8 -3.68256 | opp_overlap 549052 549053, overlap 549052 549055 CATGATGTGAATAAT TTCGCGCCGGTT TTTA AAACGGCGCGTA CTTTTTTAGTCGCAC TERM 685 549055 - 549078 + F 85 -12.4 -3.41701 | opp_overlap 549053 549052, overlap 549053 549052 TGATGTGAATAATTT CGCGCCGGTT TTTA AAACGGCGCG TACTTTTTTAGTCGC SEN0490 549221 - 550354 + | outer membrane protein TERM 686 551308 - 551290 - g 71 -7.4 -3.95535 | overlap 551288 AGAATCTGAAAAATA TCATTGCG GTA CGCAGTGA AGATGCCGATAAGCC sfbA 550611 - 551441 + | lipoprotein TERM 687 551561 - 551577 + G 81 -6.5 -4.6902 | overlap 551563 TGATGTGAGCCTGCA TATCGCC GCG GGCGAGA TTTTTGGCATTGTCG TERM 688 552448 - 552422 - g 71 -10.2 -3.29043 | gap 1, overlap 552427 AACCGCGCCGCATAA TCCAACGGCGG TGGCCG CCGCCG-TGGA GCATATCCGTCAACG TERM 689 552441 - 552427 - g 83 -12.8 -3.23274 | overlap 552422 CGCCGCATAATCCAA CGGCGG TGG CCGCCG CCGTGGAGCATATCC sfbB 551478 - 552494 + | ABC transporter ATP-binding protein TERM 690 552568 - 552587 + G 70 -3.4 -4.73912 | overlap 552572 552584 ACGGTGCTGGCGATT CTTGGCGG TCTA CCGCTCGG TTTTCTGATTTTTGT TERM 691 552584 - 552595 + G 72 -2.2 -4.83615 | overlap 552568 TTGGCGGTCTACCGC TCGG TTTT CTGA TTTTTGTCACCGATC TERM 692 552616 - 552632 + G 82 -5.1 -5.05113 | overlap 552618 GTCACCGATCGTCAT CTGTTCT GGC AGAACCG TTTTATTTATCTCGC TERM 693 552791 - 552745 - g 75 -12.1 -2.9155 | opp_overlap 552747 552749, overlap 552740 CTGGGCAATACGATA GGCCCGATTGCGGCCTCCGTC CCGCT GTCGGTGGCCGCAATCGCGTT TTATGCACGCCTGGT TERM 694 552747 - 552789 + G 100 -19.1 -4.3739 | opp_overlap 552745 552740, overlap 552749 GGGCAATACGATAGG CCCGATTGCGGCCTCCGTC CCGCT GTCGGTGGCCGCAATCGCG TTTTATGCACGCCTG TERM 695 552749 - 552787 + G 100 -20.3 -2.52946 | opp_overlap 552745 552740, overlap 552747 GCAATACGATAGGCC CGATTGCGGCCTCCGTC CCGCT GTCGGTGGCCGCAATCG CGTTTTATGCACGCC sfbC 552487 - 553146 + | ABC transporter integral membrane protein ybbB 554279 - 553185 - | hypothetical ATP-binding protein TERM 696 553224 - 553247 + g 100 -11 -5.27923 | AACCTCTTGCCATGT GCCGCGAAAA ACGA TATTCGCGGC TTTTTTCTCCAGTTG TERM 697 554243 - 554261 + g 76 -3 -5.09685 | TATCGGCAAGGAGGA GCGCGCGA TAG TCCTGTGC TTTTTGTCTGTCTTG ybbS 555275 - 554349 - | hypothetical lysR-family transcriptional regulator allA 555502 - 555984 + | ureidoglycolate hydrolase TERM 698 556009 - 556023 + F 71 -7.2 -4.12254 | opp_overlap 556009 556007 CCTTCTTGCATAAGA TGAACA TAT TGTTCA TTGTTTATGCTCATA allR 556063 - 556881 + | negative regulator of allantoin and glyoxylate utilization operons TERM 699 556887 - 556908 + F 100 -10.1 -5.16472 | overlap 556888 TGTAGCCTGAGCCGC ATCCCGCTC GCTG GAGCGGGAC TTTTTTAAAATTTTT TERM 700 556888 - 556907 + F 100 -13.6 -3.67443 | overlap 556887 GTAGCCTGAGCCGCA TCCCGCTC GCTG GAGCGGGA CTTTTTTAAAATTTT gcl 556966 - 558747 + | glyoxylate carboligase gip 558760 - 559536 + | glyoxylate-induced protein TERM 701 560120 - 560101 - g 74 -2 -5.0133 | overlap 560103 560104 CATCCTGGGAAAAAA TATCACCC TGGT GGGCGGCA ATGGGGATGGGCAAA glxR 559637 - 560515 + | 2-hydroxy-3-oxopropionate reductase TERM 702 560521 - 560546 + F 78 -11.9 -3.01712 | opp_overlap 560519 ATTGTCCTAATTATG TGTATCGCTGC GGCT GCAGCGATACC TGTTCACAAGGAACA TERM 703 561818 - 561802 - g 76 -2.9 -5.01422 | overlap 561807 TTATATAAAAAGAAA GCAACGC AAC GTATTGC TTCAGCTTAAAAATA SEN0501 560581 - 561828 + | probable metabolite transport protein allP 562065 - 563378 + | putative allantoin permease TERM 704 563560 - 563545 - g 75 -6.1 -4.58395 | TCCAGGGCGGAAAAA TCGCC GCGATT GGCGA GAACCTGGGGGAAGC TERM 705 563815 - 563830 + G 71 -6 -4.24422 | opp_overlap 563806 AATTGACCATCGACG CCGCGC AGTT GGGCGG TTTGGTTTCTTATAA TERM 706 564072 - 564060 - g 73 -9.1 -3.78329 | GGCGAGGAAGCTAAA CGCGA AGG TCGCG TAACGGCGCATGATT TERM 707 564544 - 564567 + G 70 -3 -4.8048 | opp_overlap 564547 564548, overlap 564547 CGATGTTTGGCAAAT TAATGGCGAC CAAC GCCGCCGATA TTTTTGGTCTGAAAC allB 563457 - 564818 + | putative allantoinase TERM 708 564834 - 564854 + F 100 -16.9 -3.83378 | opp_overlap 564834, overlap 564827 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 709 564854 - 564834 - f 100 -16.9 -3.05384 | opp_overlap 564834 564827 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 710 565045 - 565059 + G 83 -10 -4.08767 | ACCACCGCGTTGGCC TGCCTG GTT CAGGCA TTTTGCGGCCATCGC ybbY 564877 - 566175 + | putative permease protein glxK 566198 - 567346 + | glycerate kinase TERM 711 567377 - 567358 - T 100 -13.6 -5.71983 | TTAAGCATAAAAAAA GCCACGGT TCTC ACCGTGGC AAAATCCAACATAGC ylbA 568211 - 567426 - | hypothetical protein allC 569457 - 568222 - | allantoate amidohydrolase allD 570528 - 569479 - | ureidoglycolate dehydrogenase TERM 712 571613 - 571601 - g 70 -9.1 -3.73042 | opp_overlap 571600 571601, overlap 571599 GCGCGGATGAAAAGA GCCAG GTG CTGGC CTTTGTCTCCAAACC fdrA 570844 - 572508 + | FdrA protein ylbE 572518 - 573777 + | hypothetical protein ylbF 573789 - 574598 + | hypothetical protein arcC 574602 - 575495 + | carbamate kinase TERM 713 575497 - 575534 + T 75 -6.3 -4.46233 | gap 3, opp_overlap 575520, overlap 575498 GCATCCGTCTGTGAT C-GCGACGGGCGGCGACA GAGAA TG-CGCCGCCCA-CGCTG TTTATTTAAGCTTAC TERM 714 575498 - 575532 + T 79 -10 -3.8323 | gap 2, opp_overlap 575520, overlap 575497 CATCCGTCTGTGATC GCGACGGGCGGCGACA GAGAA TG-CGCCGCCCA-CGC TGTTTATTTAAGCTT purK 576603 - 575536 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 715 576334 - 576351 + g 72 -2 -4.96848 | CGCGGTCGCGAGTCC CAGTTT ATCGAA AAGCTG TTTTTGTGTCAGACG purE 577109 - 576600 - | phosphoribosylaminoimidazole carboxylase catalytic subunit lpxH 577949 - 577227 - | hypothetical protein TERM 716 577381 - 577394 + g 74 -4.5 -4.81249 | overlap 577369 TGACCGTGAATCAGC CACTG TACG CGGTG TTTTTCCATTTCGGC TERM 717 577912 - 577879 - G 100 -11.1 -5.03314 | gap 1, opp_overlap 577888, overlap 577881 577888 TCTACGGCTAAAAAA CGCAGAAAACCGGCGA CGA TCGCCGGTTCT-TCCG TTTGCAGATGCAAGT TERM 718 577912 - 577881 - G 83 -14.6 -2.76422 | gap 1, opp_overlap 577888, overlap 577879 577888 TACGGCTAAAAAACG CAGAA-AACCGGCGA CGA TCGCCGGTTCTTCCG TTTGCAGATGCAAGT TERM 719 577904 - 577888 - G 100 -13.7 -4.58242 | opp_overlap 577888, overlap 577879 577881 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG TERM 720 577888 - 577904 + g 93 -13.7 -3.77832 | opp_overlap 577879 577881 577888 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG ppiB 578446 - 577952 - | peptidyl-prolyl cis-trans isomerase B TERM 721 578203 - 578213 + g 73 -5.4 -4.58283 | GTGCCATTGCCAACG TACC ACG GGTA TTTTTCAGACCATTG cysS 578619 - 580004 + | cysteinyl-tRNA synthetase TERM 722 580014 - 580043 + T 100 -15.1 -6.04324 | AAGTAAGCGCTTTTA CAGGCCGCTCTAT TTGC ATAGAACGGCCTG TTTTTTATTTTTTCG SEN0519 580872 - 580048 - | putative exported outer membrane protein SEN0520 581306 - 580869 - | hypothetical protein TERM 723 580926 - 580946 + g 82 -5.3 -5.0538 | opp_overlap 580927, overlap 580928 GTCCTGATTTACCAT ATGGGCAAG GAC CTTGCCCTC TTTTTTCAAATAAGC TERM 724 580928 - 580944 + g 91 -12.3 -4.15748 | opp_overlap 580927, overlap 580926 CCTGATTTACCATAT GGGCAAG GAC CTTGCCC TCTTTTTTCAAATAA TERM 725 580961 - 580978 + g 77 -4 -5.02074 | opp_overlap 580961 CTTTTTTCAAATAAG CGCCGG TGCCTT CCTGCG TTTTTTCCAGAGTGA ybcI 581844 - 581299 - | hypothetical protein TERM 726 581931 - 581965 + r 75 -10.1 -3.48276 | gap 2, opp_overlap 581922 581920 581931 581941, overlap 581931 AAGACAGCGTAATCA G-GCCGGATA-AGACGC TTT GCGTCGCTATCCGGCAC TTGTATCAGGCCACG TERM 727 581964 - 581931 - R 78 -12.5 -2.75307 | gap 1, opp_overlap 581931 581931, overlap 581922 581920 581941 AAGACAGCGTAATCA GGCCGGATAA-GACGC TTT GCGTCGCTATCCGGCA CTTGTATCAGGCCAC TERM 728 581931 - 581964 + r 71 -10.3 -2.68823 | gap 1, opp_overlap 581931 581922 581920 581941, overlap 581931 AAGACAGCGTAATCA GGCCGGATA-AGACGC TTT GCGTCGCTATCCGGCA CTTGTATCAGGCCAC TERM 729 581953 - 581941 - R 70 -9.1 -3.30619 | opp_overlap 581931 581931, overlap 581931 581922 581920 AATCAGGCCGGATAA GACGC TTT GCGTC GCTATCCGGCACTTG ybcJ 582183 - 581971 - | hypothetical protein folD 583051 - 582185 - | FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase TERM 730 582216 - 582230 + g 70 -7.1 -4.18494 | opp_overlap 582214 582218 TCGTGATATTCAATG CACGC CTGCA GCGTG TTTTCGATAAGCGTG TERM 731 582617 - 582589 - G 74 -11.2 -3.18264 | overlap 582607 GGCCGTAGGTATCAA TATTGTAACGCT CAAGC AGCGTCACAATA CCGCGGGGCGTACAG TERM 732 583871 - 583887 + G 74 -7.9 -4.08706 | opp_overlap 583865 583866, overlap 583866 GATCCGAAAGTGGCG GCCACCG CTG CCGTGGC TTTCTCTGGTCAGGC fimA 583613 - 584155 + | type-1 fimbrial protein, a chain precursor TERM 733 584520 - 584538 + G 70 -3 -4.82901 | overlap 584522 TTTGCTGGCGTTACG CCTGCGGA AGA TCCCCATG TTTTTCTGGCCAGCG fimI 584229 - 584762 + | major pilin protein fimC 584806 - 585498 + | fimbrial chaperone protein TERM 734 585679 - 585689 + G 70 -6.8 -4.11295 | overlap 585674 585685 TCGGCGGATACCGCG TCCG TGG CGGA TTTATCTCGCTTTGA fimD 585529 - 588141 + | outer membrane usher protein FimD precursor fimH 588156 - 589163 + | FimH protein precursor fimF 589173 - 589691 + | putative fimbrial protein in fimZ 5' region fimZ 590369 - 589737 - | probable transcriptional regulator (FimXZ protein) TERM 735 589851 - 589861 + g 73 -5.4 -4.67607 | opp_overlap 589851 GTTACTCAATAAAAG TTGC TCG GCAA TTTCTTTGTTAGACA fimY 591695 - 590973 - | fimbriae Y protein SEN0532 592025 - 591714 - | hypothetical protein TERM 736 591795 - 591781 - G 71 -4.2 -4.63527 | opp_overlap 591781 GCACCAGCGTAAAAA GCAATG CTT CGTTGC TCTGATGTTTCAATG fimW 592783 - 592187 - | fimbriae w protein TERM 737 592673 - 592702 + g 88 -13.7 -3.33696 | overlap 592667 ATTATCTATCTCTTC TGGCGGCAGAAAG TCAA TTTTCTGCTGCCA TTGATTCGCCAGACG SEN0534A 593875 - 593657 - | transposase SEN0535 595914 - 594262 - | hypothetical protein yfdH 596821 - 595895 - | bactoprenol glucosyl transferase rfbI 597180 - 596818 - | bactoprenol-linked glucose translocase SEN0537A 597848 - 597603 - | putative copper-binding protein TERM 738 598092 - 598082 - R 73 -2.4 -5.10163 | AATGTCAAAATAAAA CGAG TAG CGCG CGTATCGGAGGTGAC TERM 739 598675 - 598703 + r 79 -11.7 -3.15236 | opp_overlap 598667 GCATAACGTGTGTCG CCCGCCTGCGG CGTCAAA CTGTAGGCGGG TTCAGTATACGTTTA SEN0539 599570 - 598716 - | hypothetical araC-family transcriptional regulator TERM 740 598953 - 598934 - G 70 -10 -3.35224 | gap 1, overlap 598932 ACACGTCGCGAAATA GCTGGGCGA AGC TCGCCC-GC GACATGTGTACCCGT SEN0540 599786 - 601111 + | probable pyridine nucleotide-disulfide oxidoreductase TERM 741 601127 - 601143 + F 100 -9.4 -5.83822 | opp_overlap 601124 601127 AACATAAATAATGTA GCCCTG TTAAT CAGGGC TTTTTTTTGCCTGTC TERM 742 601196 - 601171 - f 74 -3.9 -4.95155 | overlap 601173 GTCAGACCATAAAAA TACGCCAGGAC AAAT ATGCTGGCGTC TGAAAGAAAAGGCTT TERM 743 601308 - 601318 + G 81 -8.2 -4.2349 | CTTCATTATTGGCTG CGCC GCT GGCG TTTTCCGTCTCCGCC SEN0541 601268 - 601504 + | hypothetical secreted protein SEN0542 601517 - 602077 + | hypothetical protein TERM 744 602109 - 602148 + T 77 -10.9 -3.19463 | gap 2, overlap 602115 TTACCCTCTTTATGC CGCGATTCGTCGGGTGGCG CTTG CGCCATCCGAC-AAT-GTG TTGATGAATGATGGA TERM 745 602115 - 602144 + T 90 -14.3 -3.13867 | overlap 602109 TCTTTATGCCGCGAT TCGTCGGGTGGCG CTTG CGCCATCCGACAA TGTGTTGATGAATGA SEN0543 603339 - 602164 - | hypothetical protein TERM 746 603808 - 603842 + G 78 -7.1 -4.66987 | gap 1, opp_overlap 603828, overlap 603810 CGGACTGTTTCTGGG CA-TCGGCCCGGCGAT TCAA ATGGCGGGGCCGGCTG TTTTGTTGGGCTATG TERM 747 603963 - 603976 + G 75 -3.7 -4.84359 | CCTGGAAATATTGGG GGCCG TTTG CGGGC TTTTTGTCGGGCTGG pheP 603665 - 605059 + | phenylalanine-specific permease TERM 748 605065 - 605096 + T 90 -16 -2.56596 | opp_overlap 605060, overlap 605061 GGCTCATTAACTTTT TTGCCCGATCCCAT GCTC ATGCGATCGGGCAA TCCATTAATGCCGCA ybdG 606348 - 605101 - | hypothetical protein TERM 749 605485 - 605502 + g 72 -4.1 -4.78107 | gap 1, opp_overlap 605470, overlap 605470 605486 CGGCTTTAACAGTTG C-GCGGTT AAT AGCCGCTG TTTTTCATCATCATC TERM 750 605486 - 605500 + g 71 -7.8 -4.00443 | opp_overlap 605470, overlap 605470 605485 GGCTTTAACAGTTGC GCGGTT AAT AGCCGC TGTTTTTCATCATCA TERM 751 606387 - 606366 - H 71 -8 -3.85698 | opp_overlap 606383 TCTCTCCTTTATAAA CAGCAGCC TATGAT GACTGCTG AATGGCATTTATGCA TERM 752 608320 - 608298 - g 71 -10.6 -3.3071 | overlap 608299 ATACCAGTACATCAA TGCGTTTTGG CGA CCAAAACGCC CATTCGCAGGTGGGT TERM 753 608319 - 608299 - g 81 -14.1 -2.57944 | overlap 608298 TACCAGTACATCAAT GCGTTTTGG CGA CCAAAACGC CCATTCGCAGGTGGG apeE 606659 - 608629 + | outer membrane esterase TERM 754 608687 - 608699 + T 80 -6.9 -4.56607 | opp_overlap 608687 ATCGTAGGCGCAAAC CGGTG TCA CGCCG TTTTCTCCTTCATCC TERM 755 608883 - 608866 - T 100 -12.7 -5.1361 | AGAAAGGTGAAAAAA GCCGGAC GGGC GTCCGGC TTAGGCAGGGGATTA nfnB 609549 - 608896 - | oxygen-insensitive NAD(P)H nitroreductase TERM 756 609352 - 609363 + g 71 -5.8 -4.25104 | GTTGAACGTGTAGTT TCCG GCAG CGGA TTTTGCTACGCGCGC ybdF 610014 - 609646 - | hypothetical protein SEN0550 610595 - 610014 - | putative tetR-family transcriptional regulator TERM 757 610103 - 610071 - G 76 -12.1 -3.08813 | gap 1, opp_overlap 610070 610064 610087 TCCCAGCGCAATATA TTCGCCA-GCGCGA GCGGGA TCGCGCGCGGCGAA ATCCATTGTTGTTTC TERM 758 610157 - 610136 - G 72 -2.1 -4.84359 | gap 1, overlap 610137 610138 CCAGCGCCAGAAAAA GGCCGTCGCC GAA GGCG-CGGTA CTCATCCGACATAAA TERM 759 610637 - 610623 - H 80 -7.2 -4.57569 | overlap 610633 610636 TTATGTCTGGAAAAA CATGAT TGA ATCATG CCCGTTGTCGCGTCG TERM 760 610774 - 610762 - H 72 -5.5 -4.4017 | TGAAGTGGTAGAAAA GCCTA TTG CAGGC CATGCGATAAGCCAT TERM 761 610993 - 611007 + G 74 -2.7 -4.85599 | CGGGGTATTCCAAGT GGCAC CTGCA GCGCC TTTTTATGCAGTACA TERM 762 611099 - 611067 - g 86 -9.9 -4.29845 | gap 2 GAACGGAAGCTAAAA CTGG-CGGCG-CGCG ACCTG CGCGACACCGACCAG AAGGTGTATGATATT SEN0551 610884 - 611225 + | transcriptional activator RamA ybdJ 611479 - 611231 - | hypothetical protein ybdK 612664 - 611546 - | hypothetical protein entD 613380 - 612676 - | enterobactin synthetase component D fepA 615681 - 613426 - | ferrienterobactin receptor precursor TERM 763 616885 - 616864 - g 77 -8 -4.08216 | gap 1, opp_overlap 616881 TTACCCGGCTGAAAA CCG-GCGCA TTATG TGCGCGCGG ACTGCGTATCGTACT fes 615870 - 617084 + | enterochelin esterase ybdZ 617115 - 617333 + | hypothetical protein TERM 764 617964 - 617996 + G 72 -12 -2.55712 | gap 2, overlap 617963 617962 CGGCGTCAATGTCTG CCGCGC-CGTTG-CCG GGG CGGTCGGCGAGCGCGG ATATTCTACGTATGA TERM 765 618692 - 618672 - g 75 -11.1 -3.41325 | opp_overlap 618691, overlap 618670 CACACCTTAATAATA CGGCGGTAA CGA TTCCCGCCG CCACGCTTAGCGATT TERM 766 618742 - 618732 - g 74 -2.4 -5.03715 | AGCAGGCGCAAAAAA CGCC AGA GGCT TCCGCGTTGGCAGAT TERM 767 620776 - 620809 + G 78 -6.7 -4.67904 | gap 1, opp_overlap 620772, overlap 620747 620762 GGCGCAAGGGATCGC CGCC-CGGTTGTGC GCGCGCG GCGAAACCGTGGCG TTTTTGGGGTTACTG TERM 768 620878 - 620864 - g 78 -7.1 -4.57341 | AACTGGCGGGAAAAA GAGGC GAATG GCCTC AATCCGGACGTATTG entF 617330 - 621214 + | enterobactin synthetase component F TERM 769 621254 - 621280 + F 100 -14 -5.45652 | opp_overlap 621254 AATTAAATCCTGAAA CCCATAATAATT ACT AATTATTATGGG TTTTTTATTGCAACT TERM 770 621280 - 621254 - f 93 -14 -3.65084 | opp_overlap 621254 AATTAAATCCTGAAA CCCATAATAATT ACT AATTATTATGGG TTTTTTATTGCAACT TERM 771 622118 - 622104 - g 83 -7.8 -4.55128 | AGCTGGAAATCAAAA CCCGCT ATG AGCAGG AAAAGCTGGCGATGG fepE 621464 - 622600 + | ferric enterobactin transport protein TERM 772 622613 - 622632 + T 95 -12.2 -4.05389 | opp_overlap 622613 TGATTTACCCGAAAA GCCGGATA GCGA TATCCGGC TTTGTCATCTGTGTG TERM 773 622632 - 622613 - T 95 -12.2 -4.14739 | opp_overlap 622613 TGATTTACCCGAAAA GCCGGATA GCGA TATCCGGC TTTGTCATCTGTGTG fepC 623447 - 622653 - | ferric enterobactin transport ATP-binding protein FepC fepG 624433 - 623444 - | ferric enterobactin transport protein FepG TERM 774 623628 - 623579 - G 70 -9.3 -3.75024 | gap 2, opp_overlap 623580 GGCCAGTAGTAATAA TGCGCCGCACAGCGCCGACTGGG TTAATC CCCAG-CG-CGCTGTGCCGCTAA GACGGCGGGCGATGT TERM 775 624218 - 624202 - G 74 -4.3 -4.7078 | overlap 624191 624204 TCAACGACTGAAAAA TCGCGCC ACT GACGCCA AGCGCAGCGCCAATC fepD 625440 - 624433 - | ferric enterobactin transport protein FepD TERM 776 625090 - 625080 - G 74 -6.8 -4.29432 | TAAATGCCATGAAAA GCTG CTC CAGC GGCGTGGAGAAACCA ybdA 625551 - 626795 + | hypothetical membrane protein p43 fepB 627814 - 626858 - | ferrienterobactin-binding periplasmic protein precursor TERM 777 627450 - 627421 - G 77 -11.4 -3.60805 | gap 1 AGAGCTGATCGTAAA GCGCCAGC-GCGG AGTCG CCGCCGGTGGCGC TAATCAAAATGAGAT entC 628123 - 629298 + | isochorismate synthase EntC TERM 778 630518 - 630533 + G 74 -3.2 -4.87626 | opp_overlap 630511 TACACAATGCCAGCG CCTTTG ACGC CAACGG TTTTTACTGTTCCGG TERM 779 630903 - 630883 - g 76 -5.4 -4.72201 | overlap 630886 GTCGATAAAAAACAA TTACGCCA GCGGT TGGCGTCA CGTTCACCGCTCTGA entE 629308 - 630918 + | 2,3-dihydroxybenzoate-AMP ligase entB 630932 - 631789 + | isochorismatase entA 631789 - 632544 + | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase ybdB 632547 - 632960 + | hypothetical protein cstA 633142 - 635247 + | carbon starvation protein A TERM 780 635263 - 635289 + F 72 -9.4 -3.6502 | opp_overlap 635262 635264, overlap 635264 TCTTTTTACATCAAT AGCCCTCTCC AGAATAA GGAGAGGGCA TTTGAATGACAGGTG TERM 781 635264 - 635288 + F 82 -12.9 -2.78798 | opp_overlap 635262 635264, overlap 635263 CTTTTTACATCAATA GCCCTCTCC AGAATAA GGAGAGGGC ATTTGAATGACAGGT TERM 782 635288 - 635264 - f 83 -12.9 -3.19602 | opp_overlap 635264 635263, overlap 635262 CTTTTTACATCAATA GCCCTCTCC AGAATAA GGAGAGGGC ATTTGAATGACAGGT ybdD 635311 - 635508 + | hypothetical protein ybdH 636632 - 635544 - | putative oxidoreductase TERM 783 635807 - 635819 + g 70 -3.4 -4.81249 | overlap 635816 CATAAGCCACTTTCG TTCC GTGCA GGAA TTTTTCCGTTTGCGG TERM 784 637592 - 637570 - g 76 -11.9 -3.01712 | opp_overlap 637568 CGTTTTGCGTCAATA CGCCGGCGC AACTG GCGCTGGCG GATATGCTGCGCGCC ybdL 636759 - 637919 + | putative aminotransferase ybdM 638537 - 637920 - | hypothetical protein TERM 785 637981 - 637947 - GT 71 -10 -3.29144 | opp_overlap 637945 637942 637947 637951, overlap 637928 CCACGCTCTGGAGAA TCGACGGTCTGCAAAA AGC TCCTGCAGGCCGTTGA TCTGTTTCAGGCGCA TERM 786 637947 - 637981 + gT 71 -10.1 -3.24232 | opp_overlap 637928 637947, overlap 637945 637942 637951 CCACGCTCTGGAGAA TCGACGGTCTGCA AAAAGCTCC TGCAGGCCGTTGA TCTGTTTCAGGCGCA ybdN 639745 - 638510 - | hypothetical protein TERM 787 639253 - 639274 + gr 70 -2.8 -4.82901 | opp_overlap 639253 CGTCGGAACGAATAC CGACCAGC ATAGCG GCAGGACG TTTTTCTGAAAACCA TERM 788 639491 - 639480 - GR 74 -2.2 -5.10461 | GCGACCCAATAAAAA CGCT CAAT AACG TCCGCGTAGTATTCA ybdO 640813 - 639911 - | putative lysR-family transcriptional regulator TERM 789 640105 - 640080 - G 74 -2.5 -5.00616 | overlap 640087 GTTTGTGGTAAAAAA CCAATAAGCTC CGTG GAGCTGATAGA GTTGGCGATGGTCAT dsbG 641876 - 641130 - | thiol:disulfide interchange protein DsbG precursor TERM 790 641772 - 641789 + g 72 -4.1 -4.69027 | CGCCTCGAAGGATTT CAGGATA GTTA TACCCTG TTTTTCAATGGCTTT TERM 791 642143 - 642161 + H 100 -16 -5.00138 | opp_overlap 642140 TAGTTCAGGTAATGG GGCCGCCT GTC AGGCGGCC TTTTTACTTTAGATG TERM 792 642206 - 642216 + H 72 -8.2 -3.81414 | GTGTTCACAATGTCG CCCG AAA CGGG TTGTTAGTTAACGCT TERM 793 642392 - 642370 - g 95 -10.6 -4.57569 | CCAGGCGTTCAAAAA CGGTGAATTC ATT GAAGTCACCG AGAAAGATACCGAAG ahpC 642317 - 642880 + | alkyl hydroperoxide reductase c22 protein TERM 794 643017 - 643034 + F 95 -12.7 -4.05788 | AAATTGTTTCAGTCA TGGGCGC ACCC GCGCCCA TTTCATTTCAGCACC TERM 795 644413 - 644454 + G 74 -2.9 -4.8543 | gap 1, overlap 644414 GGCTGGAGTATCGTG ACCGTGTCAGCGGCGATATT CAT AGCGTCGC-GCTGGCAGGGA TTTTTGTGCAGATTG ahpF 643122 - 644687 + | alkyl hydroperoxide reductase F52A protein (subunit F) TERM 796 644827 - 644847 + F 100 -14.1 -5.63517 | opp_overlap 644827 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTATTTCAACG TERM 797 644847 - 644827 - f 93 -14.1 -3.61328 | opp_overlap 644827 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTATTTCAACG SEN0579 645020 - 645580 + | hypothetical protein TERM 798 645596 - 645607 + F 76 -4.4 -5.00884 | opp_overlap 645591 645588 TGAGACAGGACATCT GAAC AGAC GTTC TTTTTTAAAGGGGAT TERM 799 647049 - 647020 - g 73 -9.3 -3.90291 | gap 1, overlap 647030 AGTTCTTCAACGAAA CGGTGCAACACGCT GAT ATCGTGCTGC-CCG TTACCACCGCGTTTG TERM 800 647360 - 647325 - g 76 -3.2 -5.0133 | GACGGGCCGAAAAAA GCGATCCTGCCAAG TTCTGCCG CCTGGTACGACCGC AAGTTCAAAACGCCG TERM 801 647427 - 647417 - g 74 -4.6 -4.83169 | ACTGGCGGAGAAAAA CGGC CAT ACCG CGCTGCCGGAATACA SEN0580 645624 - 647852 + | molybdopterin-containing oxidoreductase catalytic subunit SEN0581 647849 - 648406 + | molybdopterin-containing oxidoreductase iron-sulfur subunit SEN0582 648406 - 649173 + | molybdopterin-containing oxidoreductase membrane anchor subunit TERM 802 649184 - 649224 + T 84 -8.2 -4.56597 | opp_overlap 649191, overlap 649185 649188 ATTAACGATGATGCA GTAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTCAG TTTTTAGCCACCAGG TERM 803 649185 - 649223 + T 82 -11.7 -3.33744 | opp_overlap 649191, overlap 649184 649188 TTAACGATGATGCAG TAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTCA GTTTTTAGCCACCAG TERM 804 649188 - 649220 + T 82 -13.4 -2.83903 | opp_overlap 649191, overlap 649185 649184 ACGATGATGCAGTAA AAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTG TCAGTTTTTAGCCAC TERM 805 649217 - 649191 - T 100 -20.2 -4.75372 | opp_overlap 649188 649185 649184 ATGATGCAGTAAAAA GCCCTGCCAGGC GTG ACCTGGCAGGGC GTGTCAGTTTTTAGC ybdQ 649669 - 649241 - | hypothetical protein TERM 806 650811 - 650826 + G 87 -8.2 -4.64334 | overlap 650789 GCGTGGTCAGCGTGC CCGGCG TGTA TGCCGG TTTTATTCACGGCTT TERM 807 650895 - 650883 - g 74 -7.7 -4.14392 | opp_overlap 650883 GGCTAACTTTTAAAA TGGGT CAA ACCCA TGTTCACGCGTGGCT ybdR 649892 - 651130 + | hypothetical zinc-dependant alcohol dehydrogenase TERM 808 651180 - 651161 - T 93 -12.2 -3.75897 | opp_overlap 651161 651163 651177 651179 AAGGGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA TERM 809 651161 - 651180 + T 79 -12.2 -2.87881 | opp_overlap 651161, overlap 651163 651177 651179 AAGGGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA rnk 651623 - 651213 - | regulator of nucleoside diphosphate kinase TERM 810 651682 - 651704 + r 86 -11.2 -3.72968 | opp_overlap 651682 GGTCCCAAAAGAAAA CCCTCACCGT CTG GCGGCGAGGG TTTAACTCTCATGAT TERM 811 651704 - 651682 - R 100 -12.7 -5.07652 | opp_overlap 651682 GGTCCCAAAAGAAAA CCCTCACCG TCTGG CGGCGAGGG TTTAACTCTCATGAT rna 652664 - 651858 - | ribonuclease I precursor TERM 812 652539 - 652528 - G 72 -3.6 -4.82901 | opp_overlap 652512 TGGCTTTGACAAAAA CCGG TTTG CCAG GAAAGCGCCAGCACA TERM 813 652717 - 652748 + r 80 -7.2 -4.63184 | opp_overlap 652720, overlap 652718 652720 CCATTTAATCATAAA AAATGCCGCTCAGG TGAA CCTGAACGGCATCA TTTTTAACCTGCGTT TERM 814 652718 - 652747 + r 77 -10.7 -3.37188 | opp_overlap 652720, overlap 652717 652720 CATTTAATCATAAAA AATGCCGCTCAGG TGAA CCTGAACGGCATC ATTTTTAACCTGCGT TERM 815 652720 - 652745 + r 83 -13.3 -3.25166 | opp_overlap 652720, overlap 652718 652717 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTGC TERM 816 652745 - 652720 - R 100 -15.5 -5.37345 | opp_overlap 652718 652717 652720 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTGC citT 654237 - 652774 - | citrate carrier TERM 817 653674 - 653663 - G 71 -7.2 -4.05208 | overlap 653664 ATCCACATCAAATAA CCGC CGAT GCGG CGTGCGGAAGGATCG citG 655171 - 654275 - | CitG protein citX 655694 - 655143 - | probable apo-citrate lyase phosphoribosyl-dephospho-coa transferase (ec 2.7.7.61) (holo-acp synthase) (holo-citrate lyase synthase) (apo-acp nucleodityltransferase) citF 657227 - 655698 - | citrate lyase alpha chain TERM 818 656342 - 656353 + g 75 -5.8 -4.66537 | opp_overlap 656332 656330 656329 AATTAGCCACAATGT TGCG GCTA CGCA TTTTGTCTTCCAGGA TERM 819 656504 - 656518 + g 72 -2.1 -4.90778 | gap 1, overlap 656503 656507 TAGTGGTCATGCGGG TC-GCG CCAG CGCCGA TTTTGTTTGCATCAC citE 658145 - 657237 - | citrate lyase beta chain citD 658438 - 658142 - | citrate lyase acyl carrier protein TERM 820 658302 - 658282 - G 73 -8.9 -3.91897 | CGTCGTAGCGAGAAA GCACCTCCA GGA TGGTGGCGC GAATGGCCTCGCCAA citC 659511 - 658435 - | [citrate (pro-3S)-lyase] ligase dpiB 659896 - 661557 + | sensor kinase DpiB dpiA 661526 - 662206 + | transcriptional regulator CriR TERM 821 662250 - 662220 - T 85 -13.9 -3.02043 | opp_overlap 662216 AAGCCTGGTTTAAGA TGCCGGGGCGATG TTTTC CCTCGCCCCGGCT TACGGTCTATCAGCC dcuC 663513 - 662260 - | C4-dicarboxylate anaerobic carrier TERM 822 662609 - 662589 - G 71 -10.5 -3.25111 | overlap 662587 TTAAAATCACTAATA CCAGCATCA GAA TAATGCTGG CGGAACCAAAAGAAG TERM 823 663175 - 663153 - G 89 -13.4 -3.59262 | CCGGAGAGGCGCAAA TAGCCGCCGC CGC GCCGCGGCTA ATGCCGACGTTGACC TERM 824 663568 - 663558 - H 91 -8.2 -4.99043 | CGCCGACAAATAAAA CGCC AGT GGCG GAATATCCCTTAATG pagP 664024 - 664596 + | antimicrobial peptide resistance and lipid A acylation protein TERM 825 664742 - 664758 + F 71 -7.3 -4.02302 | overlap 664720 GTTGTACTGGTATCC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 664781 - 664993 + | cold shock-like protein cspE TERM 826 665022 - 665038 + T 100 -10.8 -5.81032 | opp_overlap 665022 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA TERM 827 665038 - 665022 - T 90 -10.8 -4.20042 | opp_overlap 665022 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA crcB 665434 - 665051 - | hypothetical protein TERM 828 665687 - 665713 + G 76 -10 -3.86194 | overlap 665708 CTTGACCTGCCGATT CGCGCCGCGCAG CCG CTGGATGGCGCG TTTATGACGCGGCTT ybeM 665525 - 666313 + | possible hydrolase TERM 829 666401 - 666420 + F 74 -5.6 -4.72272 | gap 1, overlap 666403 TATTCTCAGGTTAAT CCGGC-GCG TTA CGCAGCCTG TTTTTAGTGAAGAAG ybeC 666442 - 666645 + | sec-independent protein translocase protein TatE TERM 830 666680 - 666694 + T 100 -9.2 -5.81412 | opp_overlap 666680 CGCAGAGTAAAAAAA CCGGCG AGT TGCCGG TTTTTTTTGCCTGAA TERM 831 666694 - 666680 - T 100 -8.5 -5.58454 | opp_overlap 666680 CGCAGAGTAAAAAAA CCGGC GAGTT GCCGG TTTTTTTTGCCTGAA lipA 667696 - 666731 - | lipoic acid synthetase ybeF 668855 - 667902 - | lysR-family transcriptional regulator lipB 669798 - 669157 - | lipoate-protein ligase B (lipoate biosynthesis protein B) ybeD 670161 - 669898 - | hypothetical protein TERM 832 670218 - 670188 - R 100 -13.5 -5.48825 | gap 1, opp_overlap 670194, overlap 670194 CATTACGTAAAAAAA TAACAACTCCCGCC ACAG GGCGGGAGTT-TTA CTGATGCATAGTATA TERM 833 670213 - 670194 - R 100 -15 -4.48073 | opp_overlap 670194, overlap 670188 GTAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA TERM 834 670194 - 670213 + r 100 -15 -4.3129 | opp_overlap 670194 670188 GTAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA dacA 671480 - 670269 - | D-alanine carboxypeptidase TERM 835 671273 - 671289 + g 71 -4.4 -4.63218 | gap 1, opp_overlap 671266, overlap 671271 TCAGACTAGCCGGGT CG-CGAC GTTC GTCGGCG TTTTGTTCCGCCAGA TERM 836 671433 - 671415 - G 74 -8 -4.03234 | overlap 671416 671426 TGCGGTTGAGATAAA CGCGGCAC AAA GCGCCGTG GTGAGCGCCATGCGC rlpA 672754 - 671621 - | rare lipoprotein A precursor mrdB 673877 - 672765 - | rod shape-determining protein RodA mrdA 675781 - 673880 - | penicillin-binding protein 2 TERM 837 674445 - 674458 + g 74 -2.3 -5.03747 | opp_overlap 674456, overlap 674456 ACCGGAATCGTATCG CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 838 675181 - 675196 + g 72 -2.5 -4.85653 | gap 1, overlap 675178 675182 CGATGTCATGGGTGG C-GGCG TAGTT CGCCAG TTTGTTTTCTCTGTC TERM 839 675208 - 675224 + g 70 -8.7 -3.63843 | overlap 675209 675214 CCAGTTTGTTTTCTC TGTCGAG ACG CTCGACG TCTTTATCATTGATT TERM 840 675405 - 675418 + g 74 -2.3 -5.00616 | opp_overlap 675399 GAAGTAAAGCGATGG GATCG GGCG CGCTC TTTTTTAAAGGCGGC TERM 841 675722 - 675710 - G 78 -6.2 -4.80396 | CAAAATACCCAAAAA GGCG ACCAG CGCC CGACGCACAAACAGT ybeA 676279 - 675812 - | hypothetical protein ybeB 676600 - 676283 - | hypothetical protein TERM 842 676533 - 676560 + g 75 -7 -4.42386 | overlap 676534 TGAACATCTAAGGCG ATGATGTCCTGA CCTT TCAGGTCATCAA TTTTGTCGATAACAA TERM 843 676534 - 676559 + g 71 -10.5 -3.2511 | overlap 676533 GAACATCTAAGGCGA TGATGTCCTGA CCTT TCAGGTCATCA ATTTTGTCGATAACA TERM 844 676693 - 676705 + r 72 -10.5 -2.8655 | TTAACGCTAACCTTC CGGCG GGA CGCCG TGTAGTATACCTGAA TERM 845 676746 - 676758 + r 79 -10.5 -3.53761 | opp_overlap 676724 TACCGGGACTTATGT CGCCG GAT CGGCG TTTAAAACCAGATTA cobC 677537 - 676929 - | alpha-ribazole-5'-phosphate phosphatase TERM 846 677593 - 677614 + H 70 -2.3 -5.00616 | CCCCTGATTGCGCAA CGTTTTTTT CACT AAAATAGCG TTTTTTGGCCGGAGG TERM 847 678117 - 678131 + G 79 -11.4 -3.61894 | opp_overlap 678105 AATCCTACCGGCCTG CTGCCG GAG CGGCAG TTATTACAGGCCATT TERM 848 678463 - 678483 + G 73 -8.9 -3.89346 | overlap 678453 GGTTACGGGAGGAGG GCGCCCGGT TTT ATCAGGCGC TTTGTCAGCTCCCCC TERM 849 678563 - 678591 + G 84 -8.7 -4.28548 | GCGAGAGGATATTGA TCTGCAGCGACGG TTG CTGACGCAGCGGA TTTTAATCCGTAGCT cobD 677634 - 678728 + | Threonine-phosphate decarboxylase nadD 679344 - 678703 - | hypothetical protein TERM 850 679046 - 679036 - G 81 -8.2 -4.30719 | opp_overlap 679039, overlap 679038 CTGGCCGATAATAAA CGCC AGC GGCG CTTCGGGCCCCTGTT holA 680377 - 679346 - | DNA polymerase III, delta subunit TERM 851 680214 - 680188 - G 73 -5.9 -4.45083 | gap 1, overlap 680189 GGCAGAGTGAGAAAA GCGATCCCCAGT CGGT ACTGG-GATCGA GAGTAAAAGCGTGGT TERM 852 680352 - 680318 - G 93 -15.8 -3.00923 | gap 1, opp_overlap 680318 680319, overlap 680311 GCCCAATAGCAGATA TGCCGCGCGCAGCCC TTCGTT GAGCTGCGCGCGG-A GTTGTTCAGGATACA TERM 853 680318 - 680353 + g 89 -13.9 -3.63515 | opp_overlap 680318 680311, overlap 680319 GCCCAATAGCAGATA TGCCGCGCGCAGCCC TTCGTT GAGCTGCGCGCGGAG TTGTTCAGGATACAA TERM 854 680319 - 680352 + g 83 -15.2 -2.77895 | opp_overlap 680318 680311, overlap 680318 CCCAATAGCAGATAT GCCGCGCGCAGCCC TTCGTT GAGCTGCGCGCGGA GTTGTTCAGGATACA rlpB 680967 - 680377 - | rare lipoprotein B precursor TERM 855 680414 - 680454 + g 76 -10.2 -3.74872 | overlap 680413 ACGCGTGCTGGCGTA GAGGCGGGCGCCGCCGTC TCATT GTCGGCGGTAGCCTCCTC TTTCGTCGCCTGAAT TERM 856 680482 - 680517 + g 74 -8.2 -3.98661 | opp_overlap 680471 AATATCCGCCGCGCG GACGCTGGTCAGCTTA CGAA TCAGCTGTTCAGCGGC TTTGTCGTACATCTC TERM 857 680736 - 680768 + g 75 -11.3 -3.3353 | overlap 680732 680740 AAATAGTCACCGTTC CAAGCCGCAGAGACG GAA CGTCTTTGCGCGTTG TGTCTTTATCAAGCA TERM 858 680740 - 680765 + g 80 -10.5 -3.80279 | gap 1, overlap 680736 680732 AGTCACCGTTCCAAG C-CGCAGAGACG GAA CGTCTTTGCGCG TTGTGTCTTTATCAA TERM 859 680909 - 680876 - G 84 -13.9 -3.05463 | ATCGTTTTCATTGAA GCCGGAACCTGCGTA GTGC TACGCAGATGCCAGC CGCATCCGGCGGTGA leuS 683564 - 680982 - | leucyl-tRNA synthetase TERM 860 682650 - 682661 + g 81 -3.6 -5.28778 | opp_overlap 682647 AGTCGCTTTAAAGCC GGTG TCGA CGCC TTTTTTCTCCATGGT TERM 861 682714 - 682754 + g 73 -5.2 -4.56597 | opp_overlap 682725, overlap 682715 682725 TTGGTGTTACGGCAT TCGTCGATGAACGCCGCC AGCTC GGCGTTGTTCGCCGCCGC TTTTTGCGCCAGCGG TERM 862 683219 - 683235 + g 76 -5.1 -4.8048 | opp_overlap 683219, overlap 683211 683209 AGTCATAGCCAAAAC CCAGC GTTTTGA GCTGG TTTTTCATGTACGCG TERM 863 683275 - 683303 + g 87 -13.8 -3.28712 | overlap 683247 683266 683268 TACGTCCACGGCGCC GGCGCGGTGTTG TTCTT CACCGCCGCGCC TTCTGCCGGCAGGCC SEN0618 683852 - 684142 + | putative hydrolase N-terminus SEN0619 684159 - 685331 + | putative hydrolase C-terminus TERM 864 685339 - 685360 + F 75 -10.1 -3.54653 | opp_overlap 685339 685340, overlap 685340 CGTTCTGATACCAAA TCGGGCAGC ACAA GCTGTCCGG TTATCTCCTGGGAAT TERM 865 685340 - 685359 + F 73 -11.4 -2.72471 | opp_overlap 685340 685339, overlap 685339 GTTCTGATACCAAAT CGGGCAGC ACAA GCTGTCCG GTTATCTCCTGGGAA TERM 866 685953 - 685974 + G 85 -4.3 -5.22039 | opp_overlap 685953 CAAGTTTCTTAAACA GGGCAGCGT GGTA ACGATTCCC TTTTTTGCCTTTGGG SEN0620 685381 - 686334 + | probable permease TERM 867 686382 - 686354 - f 84 -8.2 -4.64861 | gap 1, opp_overlap 686360, overlap 686358 TCGGCGGAAAATAAA TCACGA-CGGGCG GTCT CGCCCGTTCATAA ACCAACAGGATGGTG TERM 868 686360 - 686375 + F 79 -11.8 -3.14132 | opp_overlap 686358 686354 GAAAATAAATCACGA CGGGCG GTCT CGCCCG TTCATAAACCAACAG SEN0621 686402 - 688330 + | putative sigma-54 dependent transcriptional regulator ybeL 688423 - 688896 + | hypothetical protein TERM 869 688909 - 688932 + T 82 -13.2 -3.04263 | gap 1 TAAGGTTCATTATCG TGAGCGGACGG TTG CCGTCCGC-CA TGTTAAGCGTGCAGT ybeQ 689930 - 688935 - | hypothetical protein ybeR 690055 - 690762 + | hypothetical protein TERM 870 692131 - 692142 + G 76 -3 -5.09762 | overlap 692135 TTGGCCTCTGGCAGG TGAT TAAA ATCA TTTTATTTATTGGCG ybeS 690759 - 692192 + | hypothetical protein ybeU 692204 - 692899 + | putative conserved hypothetical protein ybeV 692896 - 694368 + | hypothetical protein TERM 871 694384 - 694398 + T 88 -12.8 -3.62275 | opp_overlap 694384 ACAGGGGTAGTGAAA GCGCCG TTA CGGCGC TTTCGGCTCGTCAAT TERM 872 694398 - 694384 - T 88 -12.8 -3.65529 | opp_overlap 694384 ACAGGGGTAGTGAAA GCGCCG TTA CGGCGC TTTCGGCTCGTCAAT hscC 696069 - 694390 - | chaperone heat shock protein TERM 873 694602 - 694634 + g 82 -11.2 -3.77196 | opp_overlap 694600, overlap 694606 CGCGGGGATAAATTT TCAGCGCCAGCAGC CGCTC GCGGCTGGCGTCGA TTTGCTGCGTCGTCA TERM 874 694606 - 694630 + g 75 -12.8 -2.68279 | opp_overlap 694600, overlap 694602 GGGATAAATTTTCAG CGCCAGCAGC CGCTC GCGGCTGGCG TCGATTTGCTGCGTC TERM 875 695136 - 695116 - G 70 -8.9 -3.69283 | opp_overlap 695116 695127 CAATTTACCGAATAA GCGCACCGC GAT GCGTTGCAC CAGCGGCATCTGTGA TERM 876 695322 - 695346 + g 77 -8.6 -4.14392 | gap 1 GATAAAGCCAGCTCA TGCG-CAGCGG GGAG CTGCTGGCGCA TTTTGCGGCTTCAAC TERM 877 696138 - 696105 - R 86 -11.9 -3.51633 | gap 1, opp_overlap 696109 696112, overlap 696096 696109 696112 AGAGAGTTTATAGAA TAAAGAACACCAC-CC TCT GGCGTGGTGATCTTTA TCAATGTCACGCCTG TERM 878 696109 - 696134 + r 74 -8.3 -3.95073 | gap 1, opp_overlap 696105 696109 696112, overlap 696112 AGTTTATAGAATAAA GAACACCAC-CC TCT GGCGTGGTGATC TTTATCAATGTCACG TERM 879 696134 - 696109 - R 81 -8.3 -4.39329 | gap 1, opp_overlap 696109 696112, overlap 696105 696112 AGTTTATAGAATAAA GAACACCAC-CC TCT GGCGTGGTGATC TTTATCAATGTCACG TERM 880 696131 - 696112 - R 79 -8.6 -4.30793 | gap 1, opp_overlap 696109 696112, overlap 696109 696105 TTATAGAATAAAGAA CACCAC-CC TCT GGCGTGGTG ATCTTTATCAATGTC ybeK 698350 - 697415 - | probable nucleoside hydrolase TERM 881 697998 - 698019 + g 71 -4.3 -4.62336 | overlap 697999 GAGACGATGGTGACC GGTTGTGCG CTCT CGCGCAGCG TTTTTGCCATCAGCT TERM 882 698458 - 698437 - R 82 -13 -2.90714 | GTAAAGCGTGAGATA GCGCGCAC TCTGAC GTGCGCGC CGGGAAGATTAGTGC gltL 699192 - 698467 - | glutamate/aspartate transport ATP-binding protein GltL gltK 699866 - 699192 - | glutamate/aspartate transport system permease protein GltK TERM 883 699267 - 699257 - G 72 -2.4 -4.92812 | TGATAACAAAATAAA CGGC GCC GGCG AACAGAATCATTTCG gltJ 700606 - 699866 - | glutamate/aspartate transport system permease protein GltJ TERM 884 700643 - 700627 - R 100 -12.3 -5.76949 | TACTCCGAAAAAAAA GGGTAGC AGC GCTACCC TCGAAGATTGTTGCC gltI 701692 - 700766 - | ABC transporter periplasmic binding protein lnt 703567 - 702029 - | apolipoprotein N-acyltransferase ybeX 704465 - 703587 - | haemolysin-related protein TERM 885 703814 - 703789 - G 71 -9.9 -3.53343 | gap 1 AAGTGGGTGCCGAAA GCGTC-ATTGAA GTC TTCAATCGACGC CAGCGCGCGAATCGT TERM 886 704405 - 704418 + g 75 -3.8 -4.946 | GCTGGCTGAGTAGCA GGGA AAAAAA TCCC TTTTTACTGTTTACT ybeY 705096 - 704623 - | hypothetical protein phoL 706178 - 705093 - | PhoH-like ATP-binding protein TERM 887 706322 - 706297 - R 83 -13.3 -3.23216 | gap 1, opp_overlap 706297 706296 706320 GGCCATGACCAGGAA GCCCGACAGGCG TAG CGCC-ATCGGGC ATTATTGCCTTTCCT TERM 888 706297 - 706322 + r 74 -11.1 -2.86619 | gap 1, opp_overlap 706297, overlap 706296 706320 GGCCATGACCAGGAA GCCCGACAGGCG TAG CGCCA-TCGGGC ATTATTGCCTTTCCT miaB 707768 - 706344 - | MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase)) TERM 889 708277 - 708244 - g 85 -12.5 -3.51365 | gap 1, overlap 708247 CTATATGGTAGAGAA CAACGTCCTGCAACAG GCG CTGTGGCAGG-CGCTG GAAGCGCACCCCGGC TERM 890 708274 - 708247 - g 80 -10.6 -3.88946 | gap 1, overlap 708244 TATGGTAGAGAACAA CGTCCTGCAACAG GCG CTGTGGCAGG-CG CTGGAAGCGCACCCC TERM 891 708528 - 708502 - g 86 -10.9 -4.14392 | gap 1, opp_overlap 708502 708501 CGTCAAGTGTGAAAA TGC-GCCAGGCG ACAG CACCTGGCAGCA GTTTACGCCAACGGG TERM 892 708542 - 708552 + G 74 -2.4 -5.04987 | CAGTTTACGCCAACG GGGC CGC GCGC TTTTTTGCCGCTGTT ubiF 707912 - 709087 + | putative monooxygenase SEN0641 709729 - 709154 - | hypothetical protein TERM 893 709537 - 709553 + g 72 -2.2 -4.91511 | ATTCCGCACTATTCT GGCG TAGCATGAC CGCC TTTTTCTGGTGCAGT TERM 894 709860 - 709833 - R 90 -13.6 -3.30597 | opp_overlap 709839, overlap 709839 ATAAACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTA AAGGTGGCTGGGGTA TERM 895 709854 - 709839 - R 100 -10.4 -5.1417 | opp_overlap 709839, overlap 709833 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAGGTGGCT TERM 896 709839 - 709854 + r 93 -10.4 -4.60041 | opp_overlap 709839 709833 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAGGTGGCT TERM 897 710778 - 710763 - R 100 -10.4 -5.60993 | opp_overlap 710763 TTTGCTATAAAAAAA GAGCCC CTAA GGGCTC TTTCGTCATCGTTAA TERM 898 710763 - 710778 + r 83 -10.4 -3.82031 | opp_overlap 710763 TTTGCTATAAAAAAA GAGCCC CTAA GGGCTC TTTCGTCATCGTTAA asnB 712459 - 710795 - | asparagine synthetase B TERM 899 711692 - 711712 + g 91 -6.8 -5.2189 | GGAGCGCTCCTGATC TTCGACGC GACGG GCGGCGAA TTTTTTGGTGATTGC TERM 900 711815 - 711830 + g 73 -5.4 -4.59773 | gap 1, overlap 711811 711814 CACGGATTCTTCCAG CGC-CTG GCG CAGCGCG TTTTTGCCGGTGACG nagD 713501 - 712749 - | NagD protein TERM 901 713001 - 712989 - G 73 -6.2 -4.52589 | opp_overlap 712993 TTTGCCGACATAAAA CGGC TTCCG GCCG GAAATTTTTTCAATG TERM 902 713376 - 713399 + g 87 -8 -4.58395 | TTGCGACGGGTAATT GGTCAGCAGC ACCA GCGGCAGACC TTTTTCCAGAATCCC nagC 714768 - 713548 - | N-acetylglucosamine repressor nagA 715927 - 714773 - | N-acetylglucosamine-6-phosphate deacetylase TERM 903 715132 - 715144 + g 70 -9.1 -3.66356 | CCAGACAAAGTTTGT CGCCT TTA AGGCG TTTGGCATTGCGAAT TERM 904 715574 - 715603 + g 73 -9.4 -3.80114 | gap 1, overlap 715576 GTGCGGATGTTTTTC CA-GGTATTCGCG CATGA CGCGAATGCCCTG TTTCATCAATTCGTC TERM 905 715576 - 715600 + g 72 -12.2 -2.68381 | overlap 715574 GCGGATGTTTTTCCA GGTATTCGCG CATGA CGCGAATGCC CTGTTTCATCAATTC TERM 906 715981 - 715949 - R 82 -7 -4.8048 | gap 1, overlap 715950 715953 CCCCGATATCAAAAA TTTACCGCCCCGC ATTGACTG GCGGGGCGG-AGA CAACATTACAGACCT TERM 907 715978 - 715953 - R 87 -14.7 -2.87672 | overlap 715949 715950 GATATCAAAAATTTA CCGCCCCGC ATTGACTG GCGGGGCGG AGACAACATTACAGA nagB 716787 - 715987 - | glucosamine-6-phosphate isomerase TERM 908 716019 - 716036 + g 74 -7.1 -4.37198 | opp_overlap 716021 TTTCTGCTTCTAATT CATTGAA ATAT TTCAATG TTTTAACTTTAAGTT TERM 909 716968 - 716988 + H 73 -7.7 -4.08394 | ACAAAAAACACCCGT TTAATTTGC GAG GCGAATTAA TTTTCCACACACTCT TERM 910 717087 - 717071 - H 100 -8.7 -5.58179 | overlap 717072 717084 CAGCACAATAAAAAA CGGCTTC AAA GAAGCCA TATCGGCGTCTCGTA TERM 911 717086 - 717072 - H 80 -10 -3.9328 | overlap 717071 717084 AGCACAATAAAAAAC GGCTTC AAA GAAGCC ATATCGGCGTCTCGT nagE 717114 - 719066 + | pts system, N-acetylglucosamine-specific IIABC component TERM 912 719153 - 719120 - f 74 -5.9 -4.5954 | opp_overlap 719125, overlap 719125 CGATATCACAGAAAA CATAAGCGGCAGAGG GGAA CCTTCGCCGCTTTTT TTTACCGCAATTAGC TERM 913 719148 - 719125 - f 87 -10.2 -4.05861 | opp_overlap 719125, overlap 719120 TCACAGAAAACATAA GCGGCAGAGG GGAA CCTTCGCCGC TTTTTTTTACCGCAA TERM 914 719125 - 719148 + F 100 -11 -5.75342 | gap 1, opp_overlap 719125 719120 TCACAGAAAACATAA GCGGCAGAGGG GAA CCTTC-GCCGC TTTTTTTTACCGCAA TERM 915 720305 - 720293 - g 93 -10.5 -4.42639 | AGATCTGAACGAAAA CGCGC CGC GCGCG ATGGCGGTAATCGAT glnS 719277 - 720944 + | glutaminyl-tRNA synthetase TERM 916 720987 - 721003 + F 100 -11.5 -5.38951 | AAAATACCTTGTCAA CGCCGCG TTT TGCGGCG TTTTTTCTCTGCATT TERM 917 721685 - 721706 + G 75 -5.7 -4.57569 | overlap 721686 GGGGTGGATCGTTGT TCCGCAGGC GCAA GCCTCCGGC TTTTTCGACGACTCC ybfM 721605 - 723011 + | putative outer membrane protein ybfN 723061 - 723393 + | putative lipoprotein TERM 918 723410 - 723436 + T 100 -13.7 -5.07107 | AACCTGCCTTGCCAC CCACGGGCGAA TGTTT TCCGCCCGTGG TTTTTTCAGGCTTTA citA 724746 - 723442 - | citrate-proton symporter TERM 919 724016 - 723988 - G 90 -5.3 -5.18371 | gap 1 GGTGATAAAATAAAA CGTTG-TGGTGG TCATCG CCACCAGCAGCG TTCCGGCCGTAATAA TERM 920 724412 - 724375 - G 89 -13.4 -3.6279 | opp_overlap 724375, overlap 724376 AAATCCTTGTAATAA CCGGCCCAACAGCACC AACGCA GGCGCTGCCAGGCCGA TCGTTTGGTAGCCGG TERM 921 724411 - 724376 - G 83 -14.7 -2.77192 | opp_overlap 724375, overlap 724375 AATCCTTGTAATAAC CGGCCCAACAGCACC AACGCA GGCGCTGCCAGGCCG ATCGTTTGGTAGCCG citB 725936 - 724797 - | citrate utilization protein B TERM 922 725182 - 725160 - G 80 -4.7 -5.0538 | overlap 725162 CGGCAGGCTAAAAAA CGGGTAGGG CGCTT CCCAACCGG CGACGTAGTGATAGC SEN0655 727326 - 725923 - | hypothetical protein TERM 923 725954 - 725967 + g 74 -9.5 -3.65991 | TGCGCCTCCTTGTGC GCCGC GCGG GCGGC TTCTATTCCCGCAAT TERM 924 726588 - 726572 - G 71 -10.1 -3.57674 | overlap 726570 ACGCGAGTACAAATA CCGCCGT CGT ACAGCGG CGCCCTGGCATCAAT TERM 925 726699 - 726689 - G 77 -8.2 -4.07687 | ACGCCCTGGTTAAAA CGCG TGC CGCG AATCAGGAAATTATC TERM 926 726726 - 726736 + g 81 -8.2 -4.36914 | opp_overlap 726713, overlap 726713 726712 TATCCGCGGGCCATT CGCC GCG GGCG TTTTCTCCCCAGGCC TERM 927 726975 - 726964 - G 90 -5.8 -5.24129 | overlap 726968 GCCGCCCATAAAAAA CGCA TTGG TGCG CGCAACGTGGAGCGC SEN0656 728350 - 727424 - | lysR-family transcriptional regulator TERM 928 727883 - 727902 + g 82 -5.6 -4.98672 | TTCTTCAAGGATCGG TCTGGCGC TCCA GCGCAGGA TTTTATCTTTTTGAA TERM 929 728429 - 728446 + r 75 -11.3 -3.03635 | opp_overlap 728429 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA TERM 930 728446 - 728429 - R 100 -11.3 -5.39721 | opp_overlap 728429 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA fur 728917 - 728465 - | ferric uptake regulation protein TERM 931 729039 - 729023 - R 75 -6.5 -4.55128 | ATGCCGAAATGAAAA CCGCAAG TCT CTCGCAG ATGTTAATAAAACTG fldA 729729 - 729199 - | flavodoxin 1 ybfE 730173 - 729880 - | hypothetical protein TERM 932 730295 - 730257 - R 80 -13.1 -2.57244 | gap 1, opp_overlap 730259 730259 730260 730262, overlap 730253 TCAGCGAGGAAGCGA CGCCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA-G TTTTTAATCAGTTAG TERM 933 730259 - 730295 + r 100 -10 -4.77157 | gap 1, opp_overlap 730257 730253, overlap 730259 730260 730262 AGCGAGGAAGCGACG C-CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGAG TTTTTAATCAGTTAG TERM 934 730259 - 730294 + r 77 -10.2 -3.45571 | opp_overlap 730257 730253, overlap 730259 730260 730262 AGCGAGGAAGCGACG CCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA GTTTTTAATCAGTTA TERM 935 730260 - 730293 + r 83 -13.7 -2.6662 | opp_overlap 730257 730253, overlap 730259 730259 730262 GCGAGGAAGCGACGC CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATG AGTTTTTAATCAGTT TERM 936 730262 - 730291 + r 72 -10.5 -2.86601 | opp_overlap 730257 730253, overlap 730260 730259 730259 GAGGAAGCGACGCCA ACGCCCGCGCGCG TAAT CGCGCACAGGCGA TGAGTTTTTAATCAG ybfF 731077 - 730307 - | putative esterase/lipase YbfF TERM 937 731517 - 731528 + G 71 -7.2 -4.03093 | opp_overlap 731517, overlap 731508 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG TERM 938 731528 - 731517 - g 100 -7.2 -5.31275 | opp_overlap 731508 731517 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG seqA 731262 - 731804 + | seqA protein TERM 939 732238 - 732228 - g 85 -2.4 -5.55769 | opp_overlap 732229, overlap 732230 GTCCATAACAAAAAA GGCG GCC CGCT GGCTGATGGTATTGT pgm 731829 - 733469 + | phosphoglucomutase TERM 940 733475 - 733463 - T 78 -6.2 -4.7078 | CGAAGTATTGAAAAA CGCC TGATG GGCG ATATGGAAGAAAAAG TERM 941 733511 - 733484 - T 77 -11.4 -3.1247 | opp_overlap 733490, overlap 733490 ATGGGCGATATGGAA GAAAAAGGAGCC TTAC GGCTCCTTTTTT GTATTAACGGCGCTG TERM 942 733505 - 733490 - T 100 -10.4 -5.12068 | opp_overlap 733490, overlap 733484 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 943 733490 - 733505 + T 100 -10.4 -5.47159 | opp_overlap 733490 733484 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 944 733526 - 733569 + T 79 -10.4 -3.50045 | gap 1, opp_overlap 733546 TGTATTAACGGCGCT GCGC-TTATCAGGCCTGTA AACCGCC TCCAGGCCGGATAAGGCGC TTGTGATATCTGACT SEN0663 734069 - 733584 - | possible 5-nitroimidazole antibiotic resistance TERM 945 734128 - 734098 - R 91 -11 -4.323 | opp_overlap 734127, overlap 734099 TTCAAAGAGTGAAAA TGCCCGGACTACCG TTA CCGCAGCCCGGGCG CGCCATCAGCCGTGT TERM 946 734127 - 734099 - R 90 -14.5 -3.18657 | overlap 734098 TCAAAGAGTGAAAAT GCCCGGACTACCG TTA CCGCAGCCCGGGC GCGCCATCAGCCGTG TERM 947 734127 - 734142 + r 70 -2.4 -4.91473 | opp_overlap 734098 TTACCGCAGCCCGGG CGCGCC ATCA GCCGTG TTTATTTTTCAATTC potE 735453 - 734134 - | putrescine-ornithine antiporter TERM 948 734291 - 734301 + g 74 -6.8 -4.25104 | opp_overlap 734291 AAGGCCACGAAGTTA GCGA CTT TCGC TTTTGATGACGGCAC speF 737648 - 735450 - | ornithine decarboxylase, inducible (ec 4.1.1.17) TERM 949 736530 - 736541 + g 84 -3 -5.29782 | GCGCGATTGCCCTTT GATA TGGC TATC TTTTTTATGGATCTG kdpE 739087 - 738410 - | KDP operon transcriptional regulatory protein kdpD 741768 - 739084 - | sensor protein KdpD TERM 950 739250 - 739218 - G 76 -10.4 -3.63068 | opp_overlap 739217, overlap 739211 739208 739219 CGATAGCATGGCAAA TCGCCAGCCCCAGC CCCAC GCCGGGGACGGCGG ACTCTTTGTTGCCGC TERM 951 739249 - 739219 - G 79 -13.9 -2.7752 | opp_overlap 739217, overlap 739211 739208 739218 GATAGCATGGCAAAT CGCCAGCCCCAGC CCCAC GCCGGGGACGGCG GACTCTTTGTTGCCG TERM 952 740733 - 740705 - G 95 -14.5 -3.53563 | opp_overlap 740706 AGACGGTCGGCGAAA GCGTCACGTCGCC ACC AGCGTCGCGACGC CGGGCGGCCCATGAC TERM 953 741050 - 741068 + g 72 -11.7 -2.82516 | TTTTCTTCGCCCGGA TGCGCGC GCCAG GCGCGCA TCTGATCGTCCACGC kdpC 742349 - 741765 - | potassium-transporting ATPase C chain kdpB 744406 - 742358 - | potassium-transporting ATPase B chain TERM 954 742950 - 742985 + g 74 -11.1 -3.30441 | gap 1, opp_overlap 742943 742942 AGAAAATCGTCCACA CCGGCT-TCGGCGGCA ATCGC TGCCGCCGTCAGGCGG TTATCGCCAGTGATC kdpA 746106 - 744427 - | potassium-transporting ATPase A chain TERM 955 746181 - 746157 - H 76 -9.3 -3.72395 | opp_overlap 746162, overlap 746162 ATAACCTAAAAGTAA GAAAACCAGCA CGA TGCCGGTTATC ACGCCTGCACTCACA TERM 956 746176 - 746162 - H 84 -7.8 -4.89562 | opp_overlap 746162, overlap 746157 CTAAAAGTAAGAAAA CCAGCA CGA TGCCGG TTATCACGCCTGCAC TERM 957 746309 - 746298 - H 73 -2.2 -5.14894 | AAAAAAGTATAAAAA TGGC AAAG ACCA TTATTTAACTAATGA TERM 958 746702 - 746729 + G 70 -3.4 -4.71426 | gap 1, overlap 746704 TAAACCGGTATGGAT GGCGCAGGCTG AAAAAGC CA-CCTGCGAC TTTTATTAATCGCGA ybfA 746532 - 746738 + | hypothetical protein TERM 959 746780 - 746759 - f 85 -7.2 -5.03715 | opp_overlap 746766 ACCAGCCTGAAAAAA CCGTCAGC CGCCAC GCTGGCGG TTTTTTTATGCGCCA TERM 960 746766 - 746780 + F 100 -11.4 -5.60993 | opp_overlap 746759 TGAAAAAACCGTCAG CCGCCA CGC TGGCGG TTTTTTTATGCGCCA TERM 961 747482 - 747470 - g 75 -6.2 -4.63218 | CCCGGTGGAAGAAAA CGCG GTCAT CGCG CAGCTACGTCAGTTT phrB 746850 - 748271 + | deoxyribodipyrimidine photolyase TERM 962 748301 - 748276 - T 74 -11.1 -2.87463 | opp_overlap 748276 748277, overlap 748264 748263 AAGGGGCGTGATACA GGCCCGGTAGC GCAA ACTACCGGGCA TTCTGCTATCAGGAT TERM 963 748276 - 748301 + T 77 -10.4 -3.4678 | opp_overlap 748264 748263 748276, overlap 748277 AAGGGGCGTGATACA GGCCCGGTAG CGCAAA CTACCGGGCA TTCTGCTATCAGGAT TERM 964 748277 - 748300 + T 83 -13.9 -2.67747 | opp_overlap 748264 748263 748276, overlap 748276 AGGGGCGTGATACAG GCCCGGTAG CGCAAA CTACCGGGC ATTCTGCTATCAGGA ybgH 749791 - 748310 - | PTR2-family transport protein ybgI 750120 - 750863 + | hypothetical protein ybgJ 750879 - 751535 + | hypothetical protein ybgK 751529 - 752461 + | hypothetical protein ybgL 752451 - 753185 + | hypothetical protein nei 753307 - 754098 + | endonuclease VIII, DNA N-glycosylase with an AP lyase activity abrB 755115 - 754153 - | hypothetical protein TERM 965 754207 - 754190 - G 89 -9.1 -4.53303 | overlap 754191 TAGGTTGATATAAAA CGGGCCA CTGC TGGCCCA GTTAACAGAATGCTG TERM 966 754206 - 754191 - G 73 -10.4 -3.315 | overlap 754190 AGGTTGATATAAAAC GGGCCA CTGC TGGCCC AGTTAACAGAATGCT TERM 967 755332 - 755295 - RH 81 -8.3 -4.55016 | opp_overlap 755299, overlap 755296 755299 AGAAAAAAGGGAAAA TGTACCGGATGGCGAGG GTTG CGTCGCCATCCGGTTGT CAATTAACGCTTCAG TERM 968 755331 - 755296 - RH 82 -11.8 -3.30569 | opp_overlap 755299, overlap 755295 755299 GAAAAAAGGGAAAAT GTACCGGATGGCGAGG GTTG CGTCGCCATCCGGTTG TCAATTAACGCTTCA TERM 969 755328 - 755299 - RH 100 -17.9 -2.79535 | opp_overlap 755299, overlap 755296 755295 AAAAGGGAAAATGTA CCGGATGGCGAGG GTTG CGTCGCCATCCGG TTGTCAATTAACGCT TERM 970 755299 - 755328 + rH 100 -17.9 -3.42056 | opp_overlap 755299 755296 755295 AAAAGGGAAAATGTA CCGGATGGCGAGG GTTG CGTCGCCATCCGG TTGTCAATTAACGCT gltA 756619 - 755336 - | citrate synthase TERM 971 756426 - 756447 + gH 77 -10.9 -3.13906 | opp_overlap 756426 756425, overlap 756424 756432 CGATGCAACAAAATG CCTTCGTCG CCGT CGATGAAGG TGATTTTAGATTCGC TERM 972 756582 - 756597 + Gg 77 -4.7 -4.85433 | AGTTCAATAGCAGTG TCACC AGTAAG GGTGA TTTTTGCCTTTGTAT SEN0681 756579 - 756965 + | hypothetical protein TERM 973 756973 - 756983 + FH 80 -5.4 -4.95758 | CCCCATAACTTTTAC GCAT TAT ATGC TTTTTCTGGTGTCGT sdhC 757374 - 757763 + | succinate dehydrogenase cytochrome b-556 subunit sdhD 757757 - 758104 + | succinate dehydrogenase hydrophobic membrane anchor protein TERM 974 758721 - 758686 - g 74 -10.4 -3.59979 | gap 1, opp_overlap 758712 GTGGTGTACTTCAAA GCCCGCG-CGACGGT GCTGGCG ACCGGCGGCGCAGGC CGTATCTACCAGTCC TERM 975 758781 - 758745 - g 71 -10.2 -3.21747 | gap 1, overlap 758757 CCAGTCCACCACCAA CGCTCACATCAACACCG GTGA CGGTGTCGGTATG-GCG CTGCGTGCCGGTGTC TERM 976 758834 - 758888 + G 81 -12.7 -3.09516 | gap 1, opp_overlap 758870 GGCAGTTCCACCCGA CCGGCATCGCCGGGGCGGGCGTGCTG GTGA CAGAAGG-CTGCCGCGGCGAAGGCGG TTACCTGCTGAACAA sdhA 758104 - 759870 + | succinate dehydrogenase flavoprotein subunit sdhB 759884 - 760603 + | succinate dehydrogenase iron-sulfur protein TERM 977 760928 - 760950 + F 74 -10.6 -3.25823 | opp_overlap 760918, overlap 760929 760931 AACAAGTGAACCCCG GCACGCATAC AGC GTATGCGTGG TTAGTATCCACGGCG TERM 978 760929 - 760949 + F 83 -14.1 -2.55351 | opp_overlap 760918, overlap 760928 760931 ACAAGTGAACCCCGG CACGCATAC AGC GTATGCGTG GTTAGTATCCACGGC TERM 979 760931 - 760947 + F 74 -10.9 -2.81547 | opp_overlap 760918, overlap 760929 760928 AAGTGAACCCCGGCA CGCATAC AGC GTATGCG TGGTTAGTATCCACG TERM 980 762573 - 762563 - g 79 -3.2 -5.1417 | CCAGAAAATCAAAAA GCAT CCG ACGC CGCGTAAAATCTACG sucA 761127 - 763928 + | 2-oxoglutarate dehydrogenase E1 component sucB 763943 - 765151 + | dihydrolipoamide succinyltransferase component (E2) TERM 981 765510 - 765486 - g 74 -4.9 -4.77157 | overlap 765498 TGAAGGTAGTAAAAA GCAAAGAAGAG ATT CGCGCCTTTGC GGAAAACTGGCTGGG TERM 982 765719 - 765698 - g 78 -5.7 -4.72846 | opp_overlap 765700, overlap 765700 GTAGAGATCGAAAAA GTCGCGGAG GAAA CCCCGCATC TGATCCATAAAGTCG TERM 983 766218 - 766203 - g 74 -7.6 -4.11484 | CCGAAGCGTTTAAAA TCATCC TCTC GGATGA CAACGTGAAAGCGGT TERM 984 766364 - 766351 - g 74 -9.5 -3.73068 | TCTGGAAGGCAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 765293 - 766459 + | succinyl-CoA synthetase beta chain sucD 766459 - 767328 + | succinyl-CoA synthetase alpha chain TERM 985 767378 - 767396 + F 100 -11.7 -5.33866 | overlap 767394 GTTTTCGACATGGTT GGCCACC TTTAC GGTGGCC TTTTTTATGGCTTTA TERM 986 767679 - 767668 - f 73 -2.2 -5.14563 | gap 1 TCCGCCATGAAAAAA GC-GC ATC GCAGC ATTACACTATGTTGA TERM 987 769182 - 769209 + G 73 -9.2 -3.77607 | gap 1, overlap 769183 769198 ACTATGTTGGGGACA TCTTCGGTGCGCC GCT GGC-CATCGAAGG TTTGATGGCCTTCTT TERM 988 769198 - 769219 + G 76 -10.9 -3.7282 | overlap 769183 769182 CTTCGGTGCGCCGCT GGCCATCGA AGGT TTGATGGCC TTCTTCCTCGAATCC cydA 768911 - 770479 + | cytochrome d ubiquinol oxidase subunit I cydB 770495 - 771634 + | cytochrome d ubiquinol oxidase subunit II ybgT 771649 - 771762 + | hypothetical protein TERM 989 771797 - 771824 + G 78 -12.1 -3.21416 | gap 1, opp_overlap 771803, overlap 771803 ACTGTATGCGGTAAT GGACAAGCGCCC GTTAA GGGCGCTT-TCC TTCGTGATGGCGATA TERM 990 771803 - 771819 + G 83 -10.8 -3.97042 | opp_overlap 771803, overlap 771797 TGCGGTAATGGACAA GCGCCC GTTAA GGGCGC TTTCCTTCGTGATGG TERM 991 771819 - 771803 - g 73 -10.8 -3.41878 | opp_overlap 771803 771797 TGCGGTAATGGACAA GCGCCC GTTAA GGGCGC TTTCCTTCGTGATGG ybgE 771795 - 772055 + | hypothetical protein TERM 992 772101 - 772076 - f 89 -9.1 -4.58685 | opp_overlap 772076 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT TERM 993 772076 - 772101 + F 93 -9.1 -4.82154 | opp_overlap 772076 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT ybgC 772284 - 772688 + | hypothetical protein tolQ 772685 - 773377 + | TolQ protein tolR 773381 - 773809 + | tolR protein TERM 994 774135 - 774122 - g 87 -8.1 -4.67556 | AGAAGAGCGTAAAAA GCTGC AACA GCAGC AAGCAGAGGAGCTGC TERM 995 774325 - 774315 - g 85 -2.4 -5.46657 | GACGCGAAGAAAAAA GCGG AGG CCGA AGCGGCGAAAGCGGC TERM 996 774595 - 774585 - g 83 -8.2 -4.45738 | GAGGCGAAGAAGAAA GCGG ATG CCGC GGCGGCGAAAGCAGC TERM 997 774655 - 774630 - g 100 -13.2 -4.45738 | overlap 774645 774646 774647 GACGCTAAGAAGAAA GCGGCTGCCG AAAAAG CGGCCGCCGC AGAAGGCGTCGACGA TERM 998 774655 - 774645 - g 87 -8.2 -4.56597 | overlap 774630 774646 774647 GCGGCTGCCGAAAAA GCGG CCG CCGC AGAAGGCGTCGACGA tolA 773874 - 775052 + | tolA protein tolB 775176 - 776468 + | tolB protein precursor pal 776503 - 777027 + | peptidoglycan-associated lipoprotein precursor TERM 999 777091 - 777107 + G 100 -15.1 -4.25104 | TTACTGGTTGGCATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCGCC TERM 1000 777363 - 777345 - g 76 -10.2 -3.63515 | GGGGAGCTTGAATAA TGGCGGCG CAG CGCAGCCA GCAGCTGGTGACCAG ybgF 777037 - 777825 + | hypothetical protein TERM 1001 777827 - 777874 + F 90 -14.3 -3.15579 | opp_overlap 777826 TTAACGCGATGTAAT GCGTACCATGCGACCAGAAAA CGCCTT TTTTCTGGTCGCGTCGTGCGA TTCCTAAGCAGTTGA TERM 1002 778119 - 778104 - f 72 -9 -3.52941 | overlap 778101 778118 AAACGTGAAGGATAA CGTTGC GTCA GCAACG GCCCGTAGGGCGAGG TERM 1003 778815 - 778783 - f 71 -9.9 -3.19463 | opp_overlap 778784 778792, overlap 778784 778792 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATATGGAA TERM 1004 778784 - 778814 + F 87 -14.9 -2.90763 | opp_overlap 778784 778783 778792, overlap 778792 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATATGGA TERM 1005 778814 - 778784 - f 80 -13.4 -2.51464 | opp_overlap 778784 778792, overlap 778783 778792 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATATGGA TERM 1006 778792 - 778806 + F 100 -8.5 -5.24989 | opp_overlap 778784 778783 778792, overlap 778784 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1007 778806 - 778792 - f 100 -9.2 -5.17576 | opp_overlap 778792 778784, overlap 778784 778783 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1008 778970 - 778938 - f 71 -9.9 -3.19463 | opp_overlap 778939 778947, overlap 778939 778947 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATATGGAA TERM 1009 778969 - 778939 - f 80 -13.4 -2.51464 | opp_overlap 778939 778947, overlap 778938 778947 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATATGGA TERM 1010 778939 - 778969 + F 87 -14.9 -2.90763 | opp_overlap 778938 778939 778947, overlap 778947 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATATGGA TERM 1011 778947 - 778961 + F 100 -8.5 -5.24989 | opp_overlap 778939 778938 778947, overlap 778939 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1012 778961 - 778947 - f 100 -9.2 -5.17576 | opp_overlap 778947 778939, overlap 778939 778938 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1013 779103 - 779117 + F 93 -9.2 -4.84527 | opp_overlap 779103 779102 779100 ACCAATGTAAAAGAG GGCGCT GGC GGCGCC TTTTTGCTATCTGCA TERM 1014 779141 - 779167 + F 73 -10.2 -3.09834 | opp_overlap 779141, overlap 779143 779149 ATCTGCAATATGGAA GATTCGAACCTG CCG CAGGTTTGGGTC TTGCCTGATGCGCTG TERM 1015 780396 - 780349 - g 70 -9.9 -3.44848 | opp_overlap 780365 780393, overlap 780347 780351 GCGGCGCATGAAATA CAGGTTGATGCGGC-GCTACGCG AGGG CGCATTACTGCCGC-TCAACCGG ATGCTGGATTTTGCG TERM 1016 780394 - 780351 - g 74 -11.1 -3.29704 | opp_overlap 780365 780393, overlap 780349 780347 GGCGCATGAAATACA GGTTGATGCGGC-GCTACGCG AGGG CGCATTACTGCCGC-TCAACC GGATGCTGGATTTTG nadA 779386 - 780429 + | quinolinate synthetase A protein TERM 1017 781164 - 781134 - g 82 -11 -3.85698 | opp_overlap 781136 781139, overlap 781136 TCGCCTGTGGATAAA CAGCGCGCGGGAGC GAG GATCGCGCGCGCTT TCCCGTTAATGGTGA TERM 1018 781162 - 781136 - g 89 -13.6 -3.51934 | opp_overlap 781136 781139, overlap 781134 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT TERM 1019 781136 - 781162 + G 89 -13.6 -3.68244 | opp_overlap 781136 781134, overlap 781139 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT pnuC 780454 - 781173 + | pnuC protein ybgR 782108 - 781170 - | probable cation transport protein TERM 1020 782196 - 782179 - R 100 -11.3 -5.54907 | opp_overlap 782178 782177 CTGACAAAATAAAAA GGAGAGC GAAA GCTCTCC CGTTATCAGACTTTT ybgS 782605 - 782219 - | hypothetical protein TERM 1021 782786 - 782800 + H 79 -2.1 -5.54894 | gap 1 TTAGATCCCATTTTT CGCTAC ATTT GT-GCG TTTTTTTCCTGAATT aroG 782925 - 783977 + | phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthetase) phenylalanine repressible TERM 1022 784052 - 784017 - T 100 -15.6 -4.57353 | opp_overlap 784021 784049, overlap 784019 GTGCAGGATAGAAAA CATATCGGTCCGGTAA CAGC CTACCGGACCGATATT GCCAATATTAATGTA TERM 1023 784050 - 784019 - T 100 -18.2 -3.89814 | opp_overlap 784021 784049, overlap 784017 GCAGGATAGAAAACA TATCGGTCCGGTAA CAGC CTACCGGACCGATA TTGCCAATATTAATG TERM 1024 784021 - 784048 + T 93 -15.7 -3.06315 | opp_overlap 784019 784017 AGGATAGAAAACATA TCGGTCCGGTA ACAGCC TACCGGACCGA TATTGCCAATATTAA SEN0706 784616 - 784071 - | putative hydro-lyase SEN0707 785476 - 784631 - | putative hydro-lyase TERM 1025 785668 - 785679 + G 74 -2.2 -4.99043 | overlap 785666 TAACTTAACCAGAGT TGCT GAGC GGCA TTTTGTTTCTCAACC SEN0708 785606 - 786496 + | LysR-family transcriptional regulator SEN0709 787480 - 786497 - | LysR-family transcriptional regulator TERM 1026 788926 - 788953 + H 72 -5.7 -4.49939 | TAGTTTGGTTTGTTT TATCGTTAGTA TGATTT TACTACCGATA TTTTATCCCTTCTAT dcoC 789021 - 789269 + | oxaloacetate decarboxylase gamma chain (ec 4.1.1.3) TERM 1027 789532 - 789508 - g 74 -7.7 -4.1196 | opp_overlap 789530 AAGCCATGCCCAAAA CCCCACTGCAG ATG CTGCTGCGCGG CCAGAACCTGCTCGG TERM 1028 790644 - 790628 - g 74 -7.2 -4.10453 | opp_overlap 790627 790629, overlap 790629 790638 CAAATTCCTCGAAAA CCGCCA CAACC CGGCGG CGTTTGAGCCACTGC SEN0712 789285 - 791054 + | oxaloacetate decarboxylase alpha chain SEN0713 791067 - 792368 + | oxaloacetate decarboxylase beta chain (ec 4.1.1.3) TERM 1029 792897 - 792916 + G 81 -12.8 -3.03124 | opp_overlap 792895, overlap 792886 CGTGCGCAGCATATC GCTGCCGG TTTA CCGGCGGC TGTTGCGGGATCAAC SEN0714 792487 - 793185 + | hypothetical protein TERM 1030 793348 - 793365 + F 100 -11.3 -5.76633 | TGTCAACAGCCTCAA GCGTGGA TGGC TCCACGC TTTTTTTGTCTATGG TERM 1031 793444 - 793386 - f 80 -12.6 -3.10597 | gap 2, opp_overlap 793389, overlap 793433 TTGTCTATGGAAAAC CCCCAGCCAGGCCCTGTGTCTTGATCAG GAGAT CTGATCAAGACACAGGGCTATGCC--GG AGGATATTTATTGGA SEN0715 793565 - 794644 + | ABC transporter permease (FecCD_family) SEN0716 794644 - 795420 + | ABC transporter ATP-binding protein TERM 1032 795440 - 795485 + T 100 -18.6 -3.29511 | gap 1, opp_overlap 795481 TATTGCCTGATGGCG CTGCGCTTATCCGGCCTAC CCATTGCTC GTAGGCCGGATAAG-GCAG TTATACCGCCATCCG TERM 1033 795531 - 795557 + T 72 -8.6 -3.74747 | TCGCTTTACCCTGAT TCGCCACGGCAG CCG CTTTCGCGGCGA TTTCGTCAGCGTTGC gpmA 796263 - 795511 - | phosphoglycerate mutase 1 TERM 1034 795892 - 795924 + g 76 -10.4 -3.62572 | ATCTTTGGTCAGTTC CGGCGGCGTCACGG CAAAA CCGCGGCGCCACTG TTTAACCTGCTCGTC galM 797527 - 796487 - | aldose 1-epimerase (mutarotase) galK 798669 - 797521 - | galactokinase galT 799718 - 798672 - | galactose-1-phosphate uridylyltransferase TERM 1035 798830 - 798849 + g 73 -5 -4.65747 | gap 1 GCGGATAAAAGTGCG CGTGCAACT GCC AGT-GCGCG TTTTCTTCACCGTTA TERM 1036 799419 - 799389 - G 70 -5.3 -4.38712 | gap 1, overlap 799390 799392 799394 799397 GTGATCGGGAGAAAA GCAGATCACGCGGC TGGT GCCGCGCGCGCT-C TGACAGCGCATCAGC TERM 1037 799412 - 799397 - G 72 -11.8 -2.76909 | overlap 799394 799392 799389 799390 GAGAAAAGCAGATCA CGCGGC TGGT GCCGCG CGCGCTCTGACAGCG TERM 1038 799611 - 799628 + g 83 -9.8 -4.09685 | AGACGGCGTTTCCTG CGCCCC CTGCCA GGGGCG TTTTGCGCGATGCGG galE 800745 - 799729 - | UDP-glucose 4-epimerase TERM 1039 800938 - 800924 - R 100 -12.8 -5.44119 | TTTATCCGAAAAAAA GGCGCG TTA CGCGCC TGGGAATGAAACGGA SEN0722 801876 - 800968 - | hypothetical protein TERM 1040 802005 - 802045 + r 73 -7.5 -4.08689 | opp_overlap 802018, overlap 802018 TCTTAATAAAAGGAG AGTGGTTCCAGAATGGCGC GCG GCGCCATTCTGATAATACA TTTAATTATTGCATC TERM 1041 802032 - 802018 - R 77 -11.4 -3.29263 | opp_overlap 802018 802005 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT TERM 1042 802018 - 802032 + r 79 -11.4 -3.44794 | opp_overlap 802018, overlap 802005 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT modF 803522 - 802047 - | putative molybdenum transport ATP-binding protein ModF (photorepair protein PhrA) TERM 1043 802974 - 803003 + g 95 -14.3 -3.61517 | CAGGGTCATACCCGC CTGGTTCAACGCC GTCA GGCGTTGCGCCAG TTGTTGACGGGCGGT TERM 1044 803395 - 803361 - G 95 -15 -3.67597 | gap 1 CTCGCCAGTTAATAA CGGCAGTTCGCCCGC CAGCGC GCGGGCGAGC-GCCG ACTTCCCGCTCCCGT modE 804378 - 803590 - | putative molybdenum transport protein ModE TERM 1045 803896 - 803912 + g 74 -7.9 -4.13767 | overlap 803884 GCTTTGCGCCGTCAG CGCGACT TTA AGCCGCG TTTTGCCGTCGGCCA TERM 1046 804427 - 804416 - g 74 -7.2 -4.18494 | overlap 804417 TATTGTGACTGAAAA GCGC GTCA GCGC AAAGCCGACCGCACA SEN0725 804405 - 804656 + | hypothetical protein TERM 1047 804667 - 804684 + F 100 -9.8 -5.1356 | opp_overlap 804667 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1048 804684 - 804667 - f 75 -9.8 -3.54424 | opp_overlap 804667 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1049 805118 - 805105 - g 85 -4.5 -5.26316 | overlap 805106 805107 GCAGCCGATAAAAAA GCGGT GGAT ACCAC GACGCGCGAAACATT modA 804823 - 805596 + | molybdate-binding periplasmic protein precursor TERM 1050 805983 - 806001 + G 95 -8 -4.89852 | opp_overlap 805967 805978, overlap 805984 GCCGCCAGAACGCTG GGCGCCGG GCG CTGGCGCG TTTTTCTGACTATCA TERM 1051 805984 - 806000 + G 77 -11.5 -3.53188 | opp_overlap 805967 805978, overlap 805983 CCGCCAGAACGCTGG GCGCCGG GCG CTGGCGC GTTTTTCTGACTATC modB 805596 - 806285 + | molybdenum transport system permease protein ModB modC 806288 - 807346 + | molybdenum transport ATP-binding protein ModC ybhA 808165 - 807347 - | hypothetical protein TERM 1052 808595 - 808609 + G 83 -6.4 -4.84918 | GACCCATATTTCTAC CGATCA TCA TGGTCG TTTTGTCTTTGTCGG TERM 1053 809289 - 809271 - g 71 -4.5 -4.65895 | opp_overlap 809282 TTGCTGACGGAAAAA GGCCG TTATGCCGT CGGCC AGGGGCCAATGTGGG ybhE 808329 - 809324 + | hypothetical protein TERM 1054 809444 - 809410 - T 95 -13.5 -4.25104 | opp_overlap 809413, overlap 809411 809413 TTGCTTGCAGTAAAA CCACGGGCCGCCACA TCTGC TGCGGCGGCCCGTTT ATAAGCCTGAACCGG TERM 1055 809443 - 809411 - T 100 -17 -3.14848 | opp_overlap 809413, overlap 809410 809413 TGCTTGCAGTAAAAC CACGGGCCGCCACA TCTGC TGCGGCGGCCCGTT TATAAGCCTGAACCG TERM 1056 809441 - 809413 - T 100 -19.6 -3.13504 | opp_overlap 809413, overlap 809411 809410 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC TERM 1057 809413 - 809441 + T 100 -17.4 -3.87815 | opp_overlap 809413 809411 809410 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC ybhC 810751 - 809468 - | possible pectinesterase precursor hutI 810989 - 812212 + | imidazolonepropionase TERM 1058 812424 - 812383 - g 74 -7.3 -4.10161 | gap 2, opp_overlap 812383 812398 GACGAGGGGGTAAAA CGCAATGCAGGGCGTCCCG GCGCGG CAGG-CGCCCCGGAT-GCG TTGCGTAAAGCGCTG TERM 1059 812733 - 812763 + G 85 -11 -4.0127 | overlap 812734 812743 GCCGTTTCGTCAACT GGCGCAGCTATGCG ACG CGCAGAGCCGCGCG TTTCATTATGCCTGT TERM 1060 812734 - 812762 + G 86 -14.5 -3.00039 | overlap 812733 812743 CCGTTTCGTCAACTG GCGCAGCTATGCG ACG CGCAGAGCCGCGC GTTTCATTATGCCTG hutG 812209 - 813150 + | formiminoglutamase TERM 1061 813840 - 813852 + G 76 -9.1 -4.06419 | CGTCGTACAACCTGG TCCGC GTC GCGGA TTGTTTCTCACGCCC hutC 813243 - 813920 + | histidine utilization repressor TERM 1062 814847 - 814816 - g 71 -10.1 -3.60098 | gap 1, opp_overlap 814822 ACCCGCGAGGGGAAA GCCGTGTCCGTCGC CCTGT GCG-CGAACGCGGC GGATATCCTGCCGGA SEN0735 814117 - 815802 + | urocanate hydratase TERM 1063 816414 - 816426 + G 75 -6.9 -4.41348 | overlap 816415 AGGCATCAACGGCCT TCGCG CTG CGCGG TTTGTTTGAGGCACA hutH 815804 - 817324 + | histidine ammonia-lyase ybhB 817885 - 817409 - | hypothetical protein bioA 819232 - 817943 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase bioB 819319 - 820359 + | biotin synthetase TERM 1064 820394 - 820424 + G 71 -11.1 -2.97747 | gap 1, opp_overlap 820372, overlap 820371 CGATGCGCTGACGGC GCGTCGG-GCGACG GATA CGTTGCGCCGCCGC TATGTGGTGTCGCAG bioF 820356 - 821513 + | 8-amino-7-oxononanoate synthase TERM 1065 821598 - 821583 - g 71 -10.4 -3.19602 | opp_overlap 821577, overlap 821581 CTCTTTACAGCAACA CAGCGC GGAT GCGCTG CTGACGCTGTTGACA TERM 1066 821965 - 821988 + G 73 -5.2 -4.56597 | opp_overlap 821970, overlap 821967 GCATGGCAGGCCGTC GATAATCGCG CTCA CGCGAATAGC TTTTTGCCGGAAGAG bioC 821497 - 822252 + | biotin synthesis protein BioC bioD 822245 - 822931 + | dethiobiotin synthetase TERM 1067 822953 - 822976 + F 71 -7.4 -3.90744 | overlap 822955 TTAAAAACCGCCTTC TTGCAGGATC AGAC GATCCTGCTG TTCTTTCGCCAGACC TERM 1068 822955 - 822974 + F 88 -12.2 -3.54488 | overlap 822953 AAAAACCGCCTTCTT GCAGGATC AGAC GATCCTGC TGTTCTTTCGCCAGA TERM 1069 823409 - 823395 - f 71 -10 -3.28712 | opp_overlap 823394 823393 CTGGTCTGGGGATAA CCAGCA CAC TGCTGG AATTTTACCCCGCGA TERM 1070 824341 - 824321 - g 70 -6.7 -4.14739 | CTATCTATCCCAAAA CGCACTACG TGA CGCCGCGCG AGCGTATTCTGCAGG TERM 1071 824434 - 824418 - g 74 -8 -3.9461 | GCTGGCGAATAATAA GCTGCT TGAAG AGCAGC GATTAAGCCAGCGCA uvrB 823582 - 825603 + | excision nuclease ABC subunit B TERM 1072 825621 - 825645 + F 87 -10.7 -4.17089 | ATGTGTCGATCGCCA GCGAGTCATCG TTA CCATGGCTCGC TTTTGAGAATTTCAG TERM 1073 825812 - 825775 - f 100 -16.6 -3.2653 | opp_overlap 825780, overlap 825780 TTAATCACAACTGAA GAAAATTAGCGTTGAG GCTGAA CCCAACGCTAATTTTC CCTCTCTCCTCGGCT TERM 1074 825780 - 825807 + F 83 -9.3 -4.26589 | gap 1, opp_overlap 825775 825780 CACAACTGAAGAAAA TTAGCGTTGAGG CTGAA CC-CAACGCTAA TTTTCCCTCTCTCCT TERM 1075 825807 - 825780 - f 100 -10.7 -4.73635 | opp_overlap 825780, overlap 825775 CACAACTGAAGAAAA TTAGCGTTGAG GCTGAA CCCAACGCTAA TTTTCCCTCTCTCCT SEN0744A 825912 - 826085 + | putative cytoplasmic protein TERM 1076 828061 - 828037 - T 74 -3.8 -5.05301 | gap 1 AAATAAGGATAAAAA TTGCTGAAAAT AGGG ATTTTCA-CAA ATGGTTTGCGCTGTG TERM 1077 828405 - 828378 - T 85 -13.6 -2.95894 | gap 1, opp_overlap 828378, overlap 828370 828404 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG TERM 1078 828378 - 828405 + T 90 -13.6 -3.40403 | gap 1, opp_overlap 828378 828370 828404 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG ybhK 829347 - 828439 - | hypothetical protein TERM 1079 829387 - 829373 - H 70 -10 -3.049 | GAAGTCAAATAAGCA GCGCTA CAG TAGCGC AAGTCGCGGGTTTTC TERM 1080 830424 - 830449 + G 95 -5.9 -5.31275 | opp_overlap 830400 GATCCACCAGCTCCG CCAGCGCAGCG ATGG CCCGGCGCAGG TTTTTTGTCATCCCG moaA 829744 - 830733 + | molybdenum cofactor biosynthesis protein A moaB 830755 - 831267 + | molybdenum cofactor biosynthesis protein B TERM 1081 831303 - 831293 - g 77 -8.2 -4.09509 | ATTAACCCATATAAA CGCC GCA GGCG AAGCGCACATGGTGG moaC 831270 - 831755 + | molybdenum cofactor biosynthesis protein C moaD 831742 - 831993 + | molybdopterin converting factor, subunit 1 moaE 831995 - 832447 + | molybdopterin converting factor, subunit 2 TERM 1082 832689 - 832702 + G 71 -8.1 -3.79864 | overlap 832687 832688 TGGCTTAATTATTGC CCAGC TTGC GCTGG TGTTTGTTCTGTCGG TERM 1083 833095 - 833067 - g 72 -2.5 -4.84529 | gap 1 GCAGAAACTGAAAAA TATCGGCGAGCA AATAGA TACCCGC-GATA GCGCTAATCTGCGTA ybhL 832495 - 833199 + | hypothetical protein TERM 1084 833219 - 833237 + F 100 -10.3 -5.42862 | opp_overlap 833219 AGCGATCTCTTAAAA TCCTGGC CTTGC GCCAGGA TTTTTTTAGGACTAT TERM 1085 833237 - 833219 - f 87 -10.3 -4.09864 | opp_overlap 833219 AGCGATCTCTTAAAA TCCTGGC CTTGC GCCAGGA TTTTTTTAGGACTAT ybhM 833344 - 834051 + | hypothetical protein TERM 1086 834148 - 834178 + G 86 -9.9 -4.2558 | opp_overlap 834147 834146 834168 834169 GTGAAGCTAAAGACG TCACTCG-CGCCATT AAA AATGGCGGCGAG-GA TTTTAATAAGAAATG TERM 1087 834301 - 834313 + G 95 -5.5 -5.3104 | TTCTTGTGGGAGGTG TGTGC AGT GCGCA TTTTGTTTTTGATAA SEN0755 834075 - 834683 + | putative inner membrane protein TERM 1088 834738 - 834722 - g 72 -2.1 -4.87626 | GGCTAACAGGAAAAA CACTGGC GGA GCTGGTG AAAAAAGGGCAGTTG TERM 1089 835167 - 835178 + G 78 -2.2 -5.252 | TTTTTCCCGCTTACA GATG AATA CGTC TTTTTTCTCAGCATA TERM 1090 835242 - 835216 - g 73 -5.9 -4.4009 | gap 1, opp_overlap 835216 TTTTACCGGATAAAA CGCGTTGT-GCT GGAA AGCGAAAACGCG TCTGCTTAAATTCAT SEN0756 834691 - 835251 + | putative inner membrane protein ybhN 836216 - 835254 - | hypothetical protein ybhO 837457 - 836216 - | putative phospholipase TERM 1091 836886 - 836900 + g 73 -5.6 -4.64676 | opp_overlap 836876 836873, overlap 836887 AACAGCGCCTGCGCT TCGCCG GGG TGGCGG TTTTCTTCGGCCTGA TERM 1092 837272 - 837286 + g 80 -9.2 -4.07568 | overlap 837275 TACTTCGGCTTTTAC GCCGCG CTG TGCGGC TTTTAGCAGAGCGGC TERM 1093 837275 - 837308 + g 75 -5.9 -4.57569 | overlap 837272 TTCGGCTTTTACGCC GCGCTGTGCGGCTTT TAGC AGAGCGGCATGGAGC TTTTTACCCACCTCA ybhP 838212 - 837454 - | hypothetical protein TERM 1094 837639 - 837667 + g 74 -7.4 -4.08216 | gap 2, overlap 837639 837658 TGAATATCTCCTCCA GCCCGGCC-G-CGT TTA ACGGCGGGCCGGCC TTTTGCCGCCAGTCA TERM 1095 838354 - 838342 - H 70 -4.8 -4.46212 | overlap 838350 TGCTTCAGGAGAAAA GCCA TGAAG TGGC AACAACGCGTTCGTG TERM 1096 838655 - 838687 + G 85 -15.5 -2.65264 | overlap 838653 ATGTCTTGCTGGCGC TGGCGGGGCTGGCTA TCC TGGCCGGGCCCGCCG TGGTCTCGCTACTGG ybhQ 838345 - 838755 + | hypothetical protein ybhR 839823 - 838717 - | putative inner membrane protein TERM 1097 839889 - 839864 - R 74 -8.3 -3.9941 | gap 1, overlap 839865 839879 839880 GGCCTGATAAGCAAA GCGCATCAGGCA TAA TGCCGGATG-GC GGCGTGAACGCCTTA ybhS 841069 - 839939 - | putative inner membrane protein TERM 1098 840191 - 840173 - G 91 -9.5 -4.63184 | opp_overlap 840179 AATCGAGGGCAAAAA GGCGGCG TTCAG CGCCACC TGCGCGGCGTTAAAC TERM 1099 840707 - 840732 + g 79 -11.1 -3.72695 | gap 1 GGTAATCACCTGAAT TGGCGCGCTGTC ACC GTC-GCGCGCCA TTTGCTGCGCGAAAT ybhF 842798 - 841062 - | hypothetical ABC transporter ATP-binding protein TERM 1100 841540 - 841528 - G 79 -3.3 -5.24531 | overlap 841529 841532 ACGCCGGAGAAAAAA CGCAG GTT CTGCT CAACCGTCAGGTTGC TERM 1101 841975 - 841985 + g 74 -2.4 -5.03314 | TGACGAATATCTGCT GCGG TCG CCTC TTTTTTCAGGATCAG TERM 1102 842456 - 842437 - G 71 -6.4 -4.23104 | opp_overlap 842437 GTAAACTCCAACAAA CGGGCAAA GGTC TTTTCCCG TATCTCGCCGGTAAC SEN0764 843786 - 842791 - | HlyD-family secretion protein TERM 1103 842907 - 842921 + g 70 -7 -4.1196 | opp_overlap 842894, overlap 842900 842916 GATCGGTACGCAGAT CCGGCG TTT CGACGG TTTTCGGCGTAAATT ybiH 844460 - 843786 - | hypothetical tetR-family transcriptional regulator TERM 1104 845986 - 845971 - g 75 -6 -4.564 | AAGGCGAAACCAAAA CCGCGC ACAG GCGAGG GGAAACCCGCGGGCG TERM 1105 846031 - 845992 - g 81 -12 -3.60805 | overlap 845993 ACAGGCGAGGGGAAA CCCGCGGGCGACAAAGCA CGTC CGCCGCGTCGCCCGCGCA GAATCACGCCTGCCC TERM 1106 846030 - 845993 - g 79 -13.3 -2.76162 | overlap 845992 CAGGCGAGGGGAAAC CCGCGGGCGACAAAGCA CGTC CGCCGCGTCGCCCGCGC AGAATCACGCCTGCC rhlE 844690 - 846051 + | putative ATP-dependent RNA helicase rhlE TERM 1107 846505 - 846491 - g 78 -2.1 -5.27779 | GGGAAGAGCAAAAAA CACTG GTGGT CAGTA CCGCTAACGTGGCGT TERM 1108 847710 - 847699 - g 85 -2.2 -5.45802 | gap 1, opp_overlap 847700 847703, overlap 847700 GGCTTAAAAGAAAAA GCCGG CGA CCG-C TTTGTGGCGCTGGAT TERM 1109 847872 - 847858 - g 79 -2.8 -5.21709 | opp_overlap 847868 847869 CTGGAGAGCAAAAAA CATCAT GGT ATGCTG GTACTGTTCGCCAGC TERM 1110 848384 - 848374 - g 70 -3.2 -4.71222 | overlap 848380 848382 ATAGTAAAACCAAAA GCAA AAC CTGC ACGCCGCCGACGGCG dinG 846259 - 848403 + | probable ATP-dependent helicase DinG TERM 1111 848386 - 848399 + F 71 -9.5 -3.24747 | opp_overlap 848382 848380 AAAGCAAAACCTGCA CGCCG CCGA CGGCG TTAATGCTGTGAGCA ybiB 848433 - 849407 + | putative glycosyltransferase TERM 1112 849434 - 849413 - T 100 -13.7 -5.8187 | overlap 849392 TAGCGAATAAAAAAA GCCCGTCCA GTGA CGGACGGGC AAATAAGGGTAACAA ybiJ 849823 - 849563 - | hypothetical protein TERM 1113 849679 - 849714 + g 73 -6 -4.41844 | gap 1, overlap 849680 TAGCTTCCAGGCCAT CCAGCGTGGTGGC-GCC ATC GGCAGACACTACGCCGA TTTTATGCAGGTTTT ybiI 850374 - 850108 - | hypothetical Zinc-finger containing protein TERM 1114 850445 - 850433 - H 80 -5.5 -5.0538 | opp_overlap 850433 850431 CGTCAGGTGAAAAAA TCGCA TCG CGCGA TCTTTTCAGACCATG TERM 1115 851257 - 851271 + G 80 -9.2 -4.1552 | GAGCTATGGTGTGAA GGCGGC GAA GTCGCC TTTATTAAAAAAATG ybiN 850579 - 851505 + | hypothetical protein ybiO 853724 - 851502 - | hypothetical protein TERM 1116 851742 - 851717 - G 95 -14.1 -3.47349 | overlap 851710 TCGTTAAACCGACAA TACCGGCGAAC GTGG GTTCGCCGATA ATCAGCCCGCGAATA TERM 1117 852764 - 852776 + g 74 -3.3 -4.86385 | GACTTAATAAATGTT GCGTA ATC TCCGC TTTGTTTTTAAAGAT TERM 1118 853579 - 853592 + g 100 -3.7 -6.09888 | overlap 853578 853577 AGTACGTCAGCCAGG GCCGC ATAG GCCGC TTTTTTTTGTTCAGG TERM 1119 853720 - 853703 - G 84 -2.7 -5.39721 | gap 1, overlap 853704 CCAGTAGACAAAAAA GGATGAAC AGG GTCCA-CC GCATGACTCCTCCAG TERM 1120 853807 - 853838 + r 79 -12.2 -2.87211 | TGGGACTATTCCATG ATGCCCTTCCTGCC GCAG GGCTGGAAGGGCGA TATCTCAGGAGACGT glnQ 854565 - 853843 - | glutamine transport ATP-binding protein GlnQ TERM 1121 853967 - 853979 + g 70 -9.1 -3.76224 | CGTGAGGCGACTTTT TCGGC AAA GCCGA TTTCGTGAGTGACAA glnP 855221 - 854562 - | glutamine transport system permease protein GlnP TERM 1122 855349 - 855309 - R 73 -9.9 -3.40597 | gap 3, overlap 855307 855310 TCCGTCACGGAAAGA GCT-GTAGGCCCGGTGAGCG TCCT CACT-ACCGGGCC-ACAAGC CAACATCAGGTCGTT glnH 856111 - 855365 - | glutamine-binding periplasmic protein precursor TERM 1123 855794 - 855814 + g 76 -3.2 -5.06451 | opp_overlap 855794 ACCGCTTTTGTAATA GCCATCGG AAAAG TCGATCGC TTTTTTACGCTCGTC TERM 1124 856451 - 856433 - R 76 -7.4 -4.19953 | opp_overlap 856433 TATTTAAGTGCAAAA CCCCTG TGCCAGG CAGGGG TATAGGGATGACTTA dps 857091 - 856588 - | DNA protection during starvation protein ybiF 858281 - 857394 - | hypothetical protein TERM 1125 857939 - 857920 - G 74 -2.8 -4.9138 | gap 1, overlap 857921 857924 ACGACCCAAATAAAA TC-TACCGG CCG CCGGGATGA AAACAGCGCGACCGC ompX 858634 - 859149 + | outer membrane protein X precursor TERM 1126 859189 - 859172 - T 91 -8.4 -5.0925 | opp_overlap 859172, overlap 859166 GGTGAAAATGAAAAA TCCGCC TTTCGG GGCGGA TTTTTTTTGCCTGAA TERM 1127 859172 - 859189 + T 100 -9.1 -5.81412 | opp_overlap 859172 859166 GGTGAAAATGAAAAA TCCGCCT TTCG GGGCGGA TTTTTTTTGCCTGAA ybiP 860792 - 859212 - | hypothetical protein TERM 1128 860278 - 860267 - G 86 -7.2 -4.74103 | TGGCGAAGCGAAAAA CCGG ATAG CCGG TATCAATAACCTTAA TERM 1129 860768 - 860724 - G 75 -6.1 -4.62783 | overlap 860725 860727 860729 CAGCGACTGTAAAAA GTAGAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAGAAG TGAATCGATAAGGGT TERM 1130 860767 - 860725 - G 70 -9.6 -3.37188 | overlap 860724 860727 860729 AGCGACTGTAAAAAG TAGAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAGAA GTGAATCGATAAGGG TERM 1131 860765 - 860727 - G 78 -12.2 -3.25166 | overlap 860725 860724 860729 CGACTGTAAAAAGTA GAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAG AAGTGAATCGATAAG TERM 1132 860763 - 860729 - G 100 -19.2 -3.18433 | overlap 860727 860725 860724 ACTGTAAAAAGTAGA GGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCC AGAAGTGAATCGATA TERM 1133 861020 - 860994 - H 100 -8 -5.77632 | overlap 860997 860998 AAAACCACAAAAAAA CAGGGGAAATGG GCG CCATTTCCGTTG AGGATGCAAAATAAA TERM 1134 861016 - 860998 - H 76 -11.8 -2.54537 | overlap 860997 860994 CCACAAAAAAACAGG GGAAATGG GCG CCATTTCC GTTGAGGATGCAAAA TERM 1135 861055 - 861036 - H 82 -7.8 -4.6951 | opp_overlap 861035 861032 861036 AGGATGCAAAATAAA GCGGCG TACCGCAC CGCCGC GTTATTTCGTGGAAG SEN0780 861371 - 861844 + | transcriptional regulator (iron dependant repressor family) TERM 1136 862460 - 862474 + G 76 -2.8 -5.06414 | overlap 862461 TGGTGTGGAGTTGCC TGGCAT TAT ATGTCG TTTTTCTTACCGCGC ybiR 861901 - 862953 + | hypothetical protein TERM 1137 862982 - 862956 - T 100 -19.6 -3.03243 | opp_overlap 862946 862942, overlap 862959 ACTGATGCCGTAAGA GAAGCCCGATAG TGT CTATCGGGCTTC GCAGGCAGAGTCTGT TERM 1138 862979 - 862959 - T 100 -15.5 -3.66288 | opp_overlap 862946 862942, overlap 862956 GATGCCGTAAGAGAA GCCCGATAG TGT CTATCGGGC TTCGCAGGCAGAGTC ybiS 863917 - 862997 - | hypothetical protein TERM 1139 863177 - 863200 + g 74 -7.4 -4.15106 | gap 1 CACCTCAATGTAACG GCTACCGTCCG GCT CGG-TGGTGGC TTTTACCGGTTCATC TERM 1140 863469 - 863479 + g 85 -4.6 -5.15969 | overlap 863466 GCCGTAGGCGTCCAG GTCG GAC CGGC TTTTTTACGTTCAAC TERM 1141 865301 - 865278 - g 74 -7.4 -4.10453 | overlap 865279 TAAATGGTCGGAAAA CGCGCGTATT GGTT ACTACGCGCA GGACCACGAATATGA ybiT 864136 - 865728 + | ABC transporter ATP-binding protein TERM 1142 865735 - 865767 + F 93 -15.7 -3.0263 | opp_overlap 865733 865729 ATCGAGTAAGTTATT GTCTGTAACCCCGAT AGC GTCGGGGTTACAGAA TGTTAACAAGATAAT SEN0784 865975 - 866871 + | hypothetical protein TERM 1143 866893 - 866876 - T 95 -12.7 -3.92075 | opp_overlap 866875 ATGCTCATTGAGAAA TCGGGGC AATT GCCCCGA CTCTCGTTAAAGTGT ybiU 869089 - 867824 - | hypothetical protein ybiV(1) 869351 - 870160 + | hypothetical protein pflF 872670 - 870238 - | putative formate acetyltransferase 3 TERM 1144 870922 - 870936 + g 80 -4.2 -5.00616 | TTGACCGATAACGCC CTGTTC GAA GACCAG TTTTTTCACGGCGGC TERM 1145 871328 - 871340 + g 76 -10.5 -3.64703 | CGATAACCCCATTTC CCGCC GAC GGCGG TTTCGATACAGCCGA pflE 873575 - 872676 - | putative pyruvate formate-lyase 3 activating enzyme TERM 1146 873809 - 873827 + r 71 -7.4 -3.98915 | opp_overlap 873809 TTATCTGTTGATACA GCACGG CCATAAA CCGTGC TTTGGTATGTTTATC moeB 874602 - 873853 - | molybdopterin biosynthesis MoeB protein TERM 1147 874308 - 874345 + g 95 -14.9 -3.64703 | gap 1 TAATGGTAATATGCG GGTTGATTCGCGCCAGCG CGT CGCGGGCG-GACTCAACC TTTGGCTGCCCGACC moeA 875843 - 874602 - | molybdopterin biosynthesis MoeA protein ybiK 876040 - 876981 + | putative L-asparaginase TERM 1148 877019 - 877054 + G 74 -10.4 -3.53012 | opp_overlap 877050 GATGAACTGGATAGC CGCGATGTTCTGTCCG TCAG TGGCCTGAATATCGCG TTTCACCACGAAGGG TERM 1149 878630 - 878642 + G 71 -4.7 -4.59773 | overlap 878629 ATTGTTGAGATGGGG CCGCG GCG CGCCG TTTTTGAAAATCCGC yliA 876992 - 878863 + | hypothetical ABC transporter ATP-binding protein TERM 1150 879127 - 879114 - g 78 -2.3 -5.17576 | CATGAAGGTAAAAAA CGTCC TGGC GGAAG GCTATACCGTTTCTG TERM 1151 880376 - 880403 + G 70 -9.1 -3.71649 | ACAGTAAAAATTTGA CCGGTTTCTGG ATTATG CCGGATACCGG TTTCAGCTTTGACGA yliB 878896 - 880434 + | putative ABC transporter periplasmic binding protein TERM 1152 880899 - 880912 + G 83 -8.1 -4.42464 | overlap 880881 880907 GTTAGGAATGACGCT TGCCG TGAC CGGCA TTTCTTTCCCGGCTT yliC 880495 - 881415 + | hypothetical ABC transporter permease protein TERM 1153 882053 - 882087 + G 80 -5.1 -4.88918 | gap 1, opp_overlap 882060 GACGATTTTGTTTAG CCATATATTGCCGGGA ACGG TCTCGTCAAT-TGTGG TTTTCTTTACGATGC yliD 881418 - 882329 + | hypothetical ABC transporter permease protein yliG 883745 - 882420 - | hypothetical protein TERM 1154 884200 - 884225 + G 70 -5.3 -4.49556 | gap 1 CGCGCTGCGCCGTGC CGAAGGCGCGCT TGC AGC-CGCCGCCG TTTGTTTAATGAGCG yliH 883976 - 884359 + | hypothetical protein TERM 1155 885264 - 885249 - g 70 -3.2 -4.81685 | AGTAATGATGAAAAA GTACTG ATTG CTGTAC GTGCAAAAATTGTAA SEN0800 885072 - 885587 + | hypothetical protein SEN0801 885610 - 886359 + | putative electron transfer flavoprotein (beta subunit) TERM 1156 886688 - 886672 - g 74 -2.1 -5.00616 | CTCTTTTGGAAAAAA CTGTGCG CCA CGCTTAG CAGCAAAACTTGATG SEN0802 886370 - 887323 + | putative electron transfer flavoprotein (alpha subunit) SEN0803 887616 - 888779 + | putative acyl-CoA dehydrogenase TERM 1157 889130 - 889142 + F 72 -4.9 -4.59212 | CCATTTCATCTGTTT TATCA CTA TGATA TTTATTTCATTGGTT SEN0804 889228 - 890913 + | putative flavoprotein SEN0805 891809 - 890919 - | LysR transcriptional regulator TERM 1158 891078 - 891101 + g 73 -6.1 -4.41047 | gap 1, opp_overlap 891078 ACGGGATGCAGCAGA GTGAGGCATT ATACC AATGCC-CAC TTTTGCTTCAACCAT TERM 1159 892067 - 892079 + r 80 -5.5 -5.00616 | GGTCATCAGGTTAAC CCGTT TAC AGCGG TTTTTTCAGCCCCGG SEN0806 892496 - 892071 - | putative inner membrane protein TERM 1160 892351 - 892340 - G 70 -3 -4.76191 | AGACAGGAAAATAAA GTTT TACA AAAC CGATCAACTTATCCA TERM 1161 893300 - 893322 + r 79 -10.6 -3.51934 | overlap 893297 893301 TTATATCAGCGACGT TTTTGTGCCG TGA CGGCACAAAC TGTTTATCGGCGCGC TERM 1162 893301 - 893321 + r 83 -14.1 -2.70946 | overlap 893300 893297 TATATCAGCGACGTT TTTGTGCCG TGA CGGCACAAA CTGTTTATCGGCGCG yliJ 894145 - 893519 - | glutathione s-transferase family protein TERM 1163 895179 - 895197 + G 77 -7.4 -4.2828 | CTGTCGTGCTGGGGG CGAAAACG GAC CGTATTCG TTTTAATGAGTCAGA dacC 894389 - 895591 + | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6 precursor) TERM 1164 895596 - 895635 + T 81 -12.8 -3.18383 | gap 1, opp_overlap 895597 895598, overlap 895597 GGTTCTCGTAAAATA AC-TCCGTTGCCGGGTGCG CGT CGCATCCGGCTACGGGCGG TTAATACATCAGAGT TERM 1165 895597 - 895634 + T 90 -16.3 -2.50816 | gap 1, opp_overlap 895597 895598, overlap 895596 GTTCTCGTAAAATAA C-TCCGTTGCCGGGTGCG CGT CGCATCCGGCTACGGGCG GTTAATACATCAGAG TERM 1166 895632 - 895597 - T 100 -15.4 -4.17048 | gap 1, opp_overlap 895596 895597, overlap 895598 GTTCTCGTAAAATAA CTCCGTTGCCGGGTGCG CGT CGCATCCGGCTACGG-G CGGTTAATACATCAG TERM 1167 895632 - 895598 - T 93 -15.6 -3.09908 | opp_overlap 895597 895596, overlap 895597 TTCTCGTAAAATAAC TCCGTTGCCGGGTGCG CGT CGCATCCGGCTACGGG CGGTTAATACATCAG deoR 896394 - 895636 - | deoxyribose operon repressor TERM 1168 896407 - 896452 + r 88 -5.5 -5.54264 | gap 1, opp_overlap 896415 896418, overlap 896415 896418 CATAGTTCCCCTGGA GAGTTAAAT-AAGCGCTCCGCA CCA TACAGAGCGCTTAATATTACTC TTTTTTTCGCTATTT TERM 1169 896443 - 896415 - R 100 -14.7 -3.70902 | opp_overlap 896407 896415 896418, overlap 896418 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1170 896415 - 896443 + r 71 -10.3 -2.62118 | opp_overlap 896415 896418, overlap 896407 896418 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1171 896440 - 896418 - R 95 -12 -3.98913 | opp_overlap 896415 896407 896418, overlap 896415 TGGAGAGTTAAATAA GCGCTCCGCA CCA TACAGAGCGC TTAATATTACTCTTT ybjG 897074 - 896466 - | putative permease protein TERM 1172 897409 - 897435 + G 74 -2.9 -4.86133 | gap 1, opp_overlap 897406 ATCGTTTACAATCAG GCGGCAGGCTGG GACG TCAGGC-GCTGC TTTTTCCTCTCTGTC TERM 1173 898057 - 898040 - g 81 -4 -5.24129 | overlap 898041 GTTGGTGATAAAAAA CCGGCG GTTCGT CGCAGG GGCGTTAGCGCTGGG mdfA 897387 - 898619 + | multidrug translocase MdfA SEN0813 899488 - 898673 - | hypothetical protein TERM 1174 899109 - 899119 + g 77 -8.2 -4.10429 | opp_overlap 899105 899108 CGATGATAATACATT GCCG CAA CGGC TTTTAACGCATCGTT TERM 1175 899144 - 899159 + g 86 -6.8 -5.00616 | ATCGTTGTACCGTTT CAGCGT GTAG GCGCTG TTTTTTCCACAGGCG SEN0814 900696 - 899485 - | hypothetical protein TERM 1176 900782 - 900801 + H 91 -8.6 -5.03314 | overlap 900781 TCATACTTCGTTGTG CAGACAGT TTTT GCTGTCTG TTTTTTCAGCGTAAG SEN0815 900864 - 901484 + | putative tetR-family transcriptional regulator SEN0816 903286 - 901601 - | hypothetical protein TERM 1177 902184 - 902172 - G 75 -4.1 -4.90778 | opp_overlap 902172 TGGATCGAAATAAAA CCAAT GCG ATCGG CGATGGTTTTTACGC TERM 1178 902344 - 902354 + g 71 -4.6 -4.57341 | overlap 902328 902327 902329 902349 CGAGGCGGCGACCGA CCGC ATT GTGG TTTTTCACCACAATT TERM 1179 902349 - 902367 + g 74 -7.5 -4.20516 | overlap 902329 902344 CGGCGACCGACCGCA TTGTGGT TTTTC ACCACAA TTTCTTCCGTCACGA TERM 1180 903699 - 903714 + G 78 -2.5 -5.18726 | TATTTTTTACGTTGC CTGGT GCGGTG GCCAG TTTTTGTTCTCACCG ybjM 903557 - 903934 + | hypothetical protein TERM 1181 903936 - 903926 - T 83 -4.6 -5.41143 | overlap 903934 903935 CACCGGCGAAAAAAA CGCC AAT AGCG CCCTCCGGTAGAGGG TERM 1182 903953 - 903935 - T 78 -12.4 -2.50411 | overlap 903926 903934 AAAAAACGCCAATAG CGCCCTCC GGT AGAGGGCG TTGCCAGAGCAATCA grxA 904229 - 903966 - | glutaredoxin 1 TERM 1183 904497 - 904536 + G 73 -10.7 -3.38604 | gap 1, opp_overlap 904520, overlap 904510 904514 GCTTAATCATTACCT TACGCT-GCCCGCGCCGT TCAAT ACGCCGCTGGCTGGCGTA TTGATGGTTTTCCTC TERM 1184 904510 - 904543 + G 84 -9 -4.26076 | gap 1, opp_overlap 904520, overlap 904497 904514 CTTACGCTGCCCGCG CCGTTCAATACGCCG CTGGC TGGCGTATTG-ATGG TTTTCCTCGGCGTCG TERM 1185 904514 - 904540 + G 76 -11.7 -3.13504 | opp_overlap 904520, overlap 904497 904510 CGCTGCCCGCGCCGT TCAATACGCCG CTGGC TGGCGTATTGA TGGTTTTCCTCGGCG ybjC 904399 - 904689 + | hypothetical protein TERM 1186 905405 - 905425 + F 73 -7.5 -4.19276 | CGCTAAAACCTGCGG GCCAGTGTA TGA TACGCGGGC TTTTCAGGGTTTTCA rimK 905453 - 906355 + | ribosomal protein S6 modification protein TERM 1187 906600 - 906614 + G 75 -5.7 -4.61482 | ATGCTAAAATCGATT TGGTG GACAA CACCA TTCTTTTTTCCGCGA ybjN 906452 - 906928 + | hypothetical protein TERM 1188 906936 - 906976 + F 88 -3.4 -5.67967 | gap 2, opp_overlap 906942 906945, overlap 906946 906947 TTCACTAATCCCTTC CGATAATCAGGCAGTCGC TGCCAGC GCGGCTG-CTGTTTA-CG TTTTTTTATGCTGCT TERM 1189 907547 - 907565 + G 83 -7.3 -4.57569 | GCCAGTTTTCTTGAG CGCCAGC TCACC GCGGGCG TTTTTCAGCCGCTGG potF 907277 - 908389 + | putrescine-binding periplasmic protein precursor potG 908477 - 909610 + | putrescine transport ATP-binding protein PotG TERM 1190 910347 - 910361 + G 74 -4.9 -4.82901 | opp_overlap 910334, overlap 910342 AAGGCGGAATCATCG CCGGC TCGAT GCTGG TTTTTATCCCGGCGG TERM 1191 910436 - 910450 + G 71 -4.2 -4.65895 | overlap 910437 ATCATGATTGGTCGC GTCCTG TGG CAGGAG TTTTTCAATAACCGC potH 909620 - 910573 + | putrescine transport system permease protein PotH TERM 1192 910863 - 910878 + G 71 -7.6 -3.96148 | TGGACGATTTCGCGG CGCAAA CGGC TTTGCG TTTATGATCACCGCG potI 910570 - 911415 + | putrescine transport system permease protein PotI TERM 1193 911445 - 911469 + F 71 -7 -4.07568 | overlap 911448 TCCACTATGGCAATG CGTTGCCGCG CGGGT CGCGGCATCA TTTTCAGGGAAGACA TERM 1194 911448 - 911466 + F 78 -11.7 -3.08032 | overlap 911445 ACTATGGCAATGCGT TGCCGCG CGGGT CGCGGCA TCATTTTCAGGGAAG ybjO 911489 - 911962 + | hypothetical protein ybjF 912005 - 913132 + | hypothetical RNA methyltransferase TERM 1195 913191 - 913237 + F 74 -10.4 -3.12892 | opp_overlap 913193 913196, overlap 913193 913196 TTATCCATAAATAAT AATAACCATGATCGATCG ATAAAAAACTC CGATCGATCGTGGTTATA TATTACCCTATTTTT TERM 1196 913193 - 913235 + F 82 -13 -3.10901 | opp_overlap 913193 913196, overlap 913191 913196 ATCCATAAATAATAA TAACCATGATCGATCG ATAAAAAACTC CGATCGATCGTGGTTA TATATTACCCTATTT TERM 1197 913235 - 913193 - f 89 -11.5 -4.16305 | opp_overlap 913193 913191 913196, overlap 913196 ATCCATAAATAATAA TAACCATGATCGATCGA TAAAAAACT CCGATCGATCGTGGTTA TATATTACCCTATTT TERM 1198 913196 - 913232 + F 83 -10.3 -3.68738 | opp_overlap 913193 913196, overlap 913193 913191 CATAAATAATAATAA CCATGATCGATCG ATAAAAAACTC CGATCGATCGTGG TTATATATTACCCTA TERM 1199 913232 - 913196 - f 79 -8.8 -4.18443 | opp_overlap 913196 913193 913191, overlap 913193 CATAAATAATAATAA CCATGATCGATCGA TAAAAAACT CCGATCGATCGTGG TTATATATTACCCTA SEN0829 913427 - 914770 + | possible transport protein SEN0830 914800 - 915120 + | putative phosphotransferase enzyme II, B component TERM 1200 915578 - 915560 - g 77 -4.4 -4.96501 | TTCCACAAAAACAAA CCGGAGGC GGC GTTTCCGG GCTATGGCGTCATGA TERM 1201 916589 - 916569 - g 75 -3.9 -4.93877 | overlap 916572 TTTGATGAAAGAAAA TGATGCTCC GGC GGAGCAGTA TCGCCGTCTGGGTCT TERM 1202 916586 - 916572 - g 70 -10 -3.34291 | overlap 916569 GATGAAAGAAAATGA TGCTCC GGC GGAGCA GTATCGCCGTCTGGG SEN0831 915130 - 916617 + | probable sulfatase TERM 1203 916680 - 916697 + T 72 -9.1 -3.58343 | opp_overlap 916669 AGTATTAGTCCGAAT CGCCTGT TGAT GCAGGCG TTTGAGACTGATGAC artJ 917567 - 916836 - | arginine-binding periplasmic protein 2 precursor TERM 1204 917711 - 917685 - R 100 -15.3 -5.68039 | opp_overlap 917683 917682 AAATGGATAAAAAAA GACGGACAAGT TAACC ACTTGTCCGTC GGGTTTATTCAATAT artM 918472 - 917804 - | arginine transport system permease protein ArtM TERM 1205 918344 - 918314 - G 74 -8.3 -3.92542 | CGTACCGGTAAACAA CGTGATATAGCCG CGCAC CAGCCACACCACG AACGGCGTTTTTAGC artQ 919188 - 918472 - | arginine transport system permease protein ArtQ artI 919926 - 919195 - | arginine-binding periplasmic protein 1 precursor artP 920672 - 919944 - | arginine transport ATP-binding protein ArtP TERM 1206 920860 - 920830 - R 71 -7.7 -3.97709 | gap 1, opp_overlap 920830 AGTAGGTAAGAAGAA TTGTC-GGCATCCC GGGC AGAATGCCAGACAA TTTACGGGGTTATGG ybjP 921417 - 920902 - | probable lipoprotein orfB 921545 - 921868 + | hypothetical protein TERM 1207 922452 - 922467 + G 73 -5.4 -4.55287 | gap 1, overlap 922446 TGGCGCCTGGCCTGA CGCC-CA GCG TGTGGCG TTTTATCTGGCTGGA ybjR 921865 - 922695 + | putative N-acetylmuramoyl-L-alanine amidase SEN0840 923705 - 922692 - | putative oxidoreductase ybjT 925234 - 923801 - | hypothetical protein TERM 1208 924321 - 924334 + g 86 -3.8 -5.40014 | TCGTAGCCCCAGTCG CTGG AGTTCA CCAG TTTTTCTTCTTCTTT TERM 1209 924436 - 924457 + g 77 -8.1 -4.15565 | gap 1 CGGCCAGCAAATCGT GCCTTAA-CC CCT GGATTAAGGC TTTTGCGGTAGTCGG ltaA 926246 - 925245 - | L-allo-threonine aldolase TERM 1210 925591 - 925601 + g 71 -8.2 -3.86202 | overlap 925590 ACCATTTTACGCCAG CGCG TCG CGCG TTTAATGTAATCGCG TERM 1211 925927 - 925982 + g 83 -12.6 -3.16039 | GGCAGCGTACCGTCC GC-GGCGGCGTCGATGG-GCTGCGGCTG AATG CTGCCG-AGCACCGCCG-CGCCGCCAGC TTCATAAAGATAATT poxB 928003 - 926285 - | pyruvate dehydrogenase TERM 1212 927399 - 927424 + g 76 -3.2 -5.09173 | overlap 927405 ATTAATGCGATATTG CTGGAGTAGC GCAGCA GTTGCGCCAG TTTTTTCAGCTCTTC TERM 1213 927834 - 927789 - G 81 -12.7 -3.14132 | opp_overlap 927808 CCCGGTCCGCATGAA CCGGCGCACACTGC-CAGCTC GCCGGT AAGCTGCGCT-TGTGCGCCGG CAGCGAAAGCGGCGA TERM 1214 928112 - 928140 + r 74 -11 -2.79312 | gap 1, opp_overlap 928100 928099 928111 928112 AAGCGAGCGGCAAAT CGCCCGGT-AGCG CTGA CGCTTACCGGGCC TATGATGGAACGTTT TERM 1215 928140 - 928112 - R 73 -11 -2.7464 | gap 1, opp_overlap 928112, overlap 928100 928099 928111 AAGCGAGCGGCAAAT CGCCCGGT-AGCG CTGA CGCTTACCGGGCC TATGATGGAACGTTT hcr 929132 - 928161 - | NADH oxidoreductase Hcr hcp 930793 - 929141 - | prismane protein homolog (hybrid-cluster protein) TERM 1216 930599 - 930587 - G 85 -6.9 -4.83615 | overlap 930588 CAGCGTGGAGAAAAA CGCGC GCG GCGCA AAGTTATCAACGTCG ybjE 931728 - 930937 - | hypothetical protein TERM 1217 931249 - 931232 - G 70 -9.1 -3.62572 | opp_overlap 931237 931242 GAGTACCAGCCGAAA CCTGACG CCAT CGCCAGG GCGGTTTTTAGCGGT TERM 1218 931676 - 931656 - G 84 -6.1 -4.99435 | CGGAATAATGAAAAA TCGCCACCA GAT TACTGGCGA GGTTATCCAAAAACG TERM 1219 932156 - 932143 - g 70 -6.7 -4.08064 | AACGCCTGGGGAAAA TCCAG CCTG CTGGA TGCGCTGACTCTGTT TERM 1220 932399 - 932423 + G 70 -5 -4.42386 | gap 1, overlap 932400 GCGAATGCGGCGCCG ATG-GCAGCGT GATG ACGCTGCGCAG TTTTCTCAATAGCGA TERM 1221 932514 - 932526 + G 80 -10.5 -3.87641 | overlap 932522 GCCAGTGCTACGTTT GCGCG ATG CGCGC TTTATGCGACGTATT TERM 1222 932817 - 932806 - g 71 -7.2 -3.93695 | CGGATGATCGACAAA CCGG GCAG CCGG TCGCATCGGGTGATC TERM 1223 933109 - 933144 + G 70 -9 -3.73224 | gap 1, opp_overlap 933117, overlap 933122 CCGGGCGGGTTAAGC GCGGAAGATGGACGGCG TAT CGCCTTTCATAT-CCGC TTTAATCGCGCGTCG TERM 1224 933122 - 933132 + G 71 -8.2 -3.85114 | opp_overlap 933117, overlap 933109 GCGCGGAAGATGGAC GGCG TAT CGCC TTTCATATCCGCTTT ybjD 932038 - 933696 + | hypothetical protein ybjX 934661 - 933693 - | putative virK protein TERM 1225 935188 - 935160 - g 76 -10.3 -3.64822 | AGCCGCTGAGTTAAA GCTGGCGCG GGTTACGCTGG CGCGCCAGC AGCAGTTAGCTAAGA ybjY 934789 - 935907 + | hypothetical protein TERM 1226 937739 - 937754 + G 86 -6.8 -5.0916 | overlap 937740 CGGTTTTTCACTGAC TGCGCT GGCG AGCGCG TTTTTATGTTCGACG ybjZ 935904 - 937850 + | conserved hypothetical ABC transporter TERM 1227 937943 - 937923 - T 100 -12.6 -5.27335 | opp_overlap 937923 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTCCTGGAT TERM 1228 937923 - 937943 + T 95 -12.6 -4.21462 | opp_overlap 937923 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTCCTGGAT cspD 938201 - 937980 - | cold shock-like protein CspD TERM 1229 938054 - 938072 + g 70 -8.8 -3.63305 | opp_overlap 938055, overlap 938055 CCTGGTGGACATCAA ACCGGACA GAC TGTCCGGC TTTAAGCGTTCTGTA TERM 1230 938055 - 938071 + g 72 -12.3 -2.77501 | opp_overlap 938055, overlap 938054 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1231 938071 - 938055 - G 86 -12.3 -3.83026 | opp_overlap 938055 938054 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1232 938637 - 938647 + G 75 -6.8 -4.45738 | opp_overlap 938637 TCAATGATGATTACA CTCC GAT GGAG TTTGTTATTGACGTG TERM 1233 938766 - 938735 - g 71 -8 -3.79043 | gap 1, overlap 938730 CACTATCAAGGCAAA GCCATCTGCGGCG TGTTCAC CGCCG-AGGTGGC GGAAACCAAAGTGGC yljA 938525 - 938845 + | hypothetical protein TERM 1234 939548 - 939537 - g 74 -7.2 -4.07568 | CCGGCGTCGGCAAAA CGGC GATT GCCG AAGGGCTGGCCTGGC TERM 1235 939816 - 939800 - g 73 -9.4 -3.7795 | GCAAATCTGATTAAA CCGCTG CTTTC CAGCGG CAAGATCCGGGTGAT clpA 938876 - 941152 + | ATP-dependent Clp protease ATP-binding subunit ClpA TERM 1236 941193 - 941176 - T 80 -9.8 -3.86346 | opp_overlap 941176 TCACTGCCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTACGCCGGC TERM 1237 941176 - 941193 + T 100 -9.8 -5.40072 | opp_overlap 941176 TCACTGCCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTACGCCGGC SEN0853B 941562 - 941365 - | hypothetical protein SEN0853A 942101 - 941724 - | probable integrase remnant TERM 1238 942259 - 942240 - R 93 -10 -4.61199 | opp_overlap 942240 942238 AGTTTAGATACAAAA GCCCGTAC TTTC GTACGAGC TCTTTCTTGAATATG TERM 1239 942419 - 942429 + r 76 -4.6 -4.96848 | AGCTCTGTTCAAAAA CGCT CCC GGCG TTTTTGTGTCGAACC TERM 1240 942517 - 942498 - R 100 -10 -4.9755 | ATATATAAGCAAAAA GCCCGTAC TTCT GTACAGGC TCTCAACTTGAATAT TERM 1241 942761 - 942738 - R 95 -13.2 -3.69364 | gap 1 ATGCAATAGACATAA TCCCCGC-CCA AAC TGGCGCGGGGA GGCAAATTAGCGCTG SEN0854 943445 - 942768 - | hypothetical protein SEN0855 944325 - 943465 - | putative pirin-related protein TERM 1242 943492 - 943518 + g 74 -7.3 -4.09455 | opp_overlap 943496 AAAACGGCCGGAGTT GAAATCGCGGA CTGCT TCTGCGATCTC TTGTTTCGTGTTCAT TERM 1243 944133 - 944160 + g 85 -7 -4.8622 | gap 1, opp_overlap 944132 944133, overlap 944132 TCACGGTCTCGAAAC CGCGGTG-TGG ATGCTCC CCAACGCCGCG TTTTTCATTACCCGG SEN0856 944434 - 945345 + | hypothetical transcriptional activator TERM 1244 945399 - 945383 - T 100 -10.1 -5.10497 | opp_overlap 945383 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC TERM 1245 945383 - 945399 + T 76 -7.9 -4.36914 | opp_overlap 945383 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC infA 945654 - 945436 - | initiation factor IF-1 TERM 1246 945999 - 945952 - R 82 -2.8 -5.46657 | gap 1, overlap 945953 CACCCCAATAAAAAA TGTGCCGAAAACATTCACTTCCG GGG CAAAAAT-AATGTCCGCGGCACC CAAAAACGGGAGGCC aat 946670 - 945966 - | leucyl/phenylalanyl-tRNA-protein transferase TERM 1247 946168 - 946157 - G 74 -2.2 -5.05782 | gap 1, opp_overlap 946158, overlap 946158 ATTCAGCGCAAAAAA CCAGC AGT GC-GG TTTTAGAGGCATTCT TERM 1248 946542 - 946524 - G 80 -8.8 -4.07568 | overlap 946525 946527 GTCGCCCGGCGAAAA CCACGGGA AAA TCCCGTGC TGGTAGGCCATTAAC TERM 1249 946541 - 946525 - G 76 -12.3 -3.04398 | overlap 946524 946527 TCGCCCGGCGAAAAC CACGGGA AAA TCCCGTG CTGGTAGGCCATTAA cydC 948436 - 946715 - | transport ATP-binding protein CydC TERM 1250 947609 - 947591 - G 86 -9.5 -4.27117 | opp_overlap 947603, overlap 947568 CGCGCAGAAGACAAA CAGCGCG ATGAG CGCGCCG GGCTGCGTATTGCCG cydD 950203 - 948437 - | transport ATP-binding protein CydD TERM 1251 948492 - 948477 - G 91 -11.8 -4.12599 | opp_overlap 948477, overlap 948467 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCGGCATAAC TERM 1252 948477 - 948492 + g 71 -11.8 -2.53263 | opp_overlap 948467 948477 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCGGCATAAC TERM 1253 949048 - 949072 + g 70 -9.9 -3.41051 | AGCTTTTACCGGAAC CGCTGCGTCCT ACC AGGACGGCGCG TTCTCCTGCCGCTAA TERM 1254 949457 - 949442 - G 73 -5.4 -4.63184 | overlap 949429 AAGCGAGGTGAAAAA TTCCAG CACG CCGGAA GATAAAAAGGCGAGG TERM 1255 949476 - 949466 - G 74 -2.4 -5.0916 | GCCGGAAGATAAAAA GGCG AGG CGCA GTACTTCCATCGTGC TERM 1256 949617 - 949593 - G 75 -5.8 -4.65078 | gap 2 AGACGGTCAAGAAAA TGGCCGCTTAGC CGG GC-AAGC-GCCA GGAAATTGCGGCGGT TERM 1257 950286 - 950270 - R 100 -12.3 -4.89063 | opp_overlap 950270 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT TERM 1258 950270 - 950286 + r 100 -12.3 -5.52347 | opp_overlap 950270 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT trxB 951285 - 950317 - | thioredoxin reductase lrp 951831 - 952325 + | leucine-responsive regulatory protein TERM 1259 952379 - 952415 + F 95 -11.6 -4.13767 | gap 1, opp_overlap 952381 952385, overlap 952382 952385 TCCTGTTAATCCATA CAG-CAACAGTGCCGGG GCAA CCCGGTGCTGTTGTCCG TTTTAGCATCGGGCG TERM 1260 952382 - 952411 + F 95 -16.5 -2.75577 | opp_overlap 952381 952385, overlap 952379 952385 TGTTAATCCATACAG CAACAGTGCCGGG GCAA CCCGGTGCTGTTG TCCGTTTTAGCATCG TERM 1261 952385 - 952408 + F 88 -12.4 -3.52113 | opp_overlap 952381 952385, overlap 952382 952379 TAATCCATACAGCAA CAGTGCCGGG GCAA CCCGGTGCTG TTGTCCGTTTTAGCA TERM 1262 953640 - 953626 - g 72 -11.4 -3.09492 | overlap 953634 953635 TGCTCAACCGCAAGA GGCGCA AAG TGCGCC GTGGCAGCAACCTGT TERM 1263 953969 - 953954 - g 77 -8.2 -4.19624 | GAGGTGGAAGAGAAA CGCGCC CGTG AGCGCG AACAACTGGCGGCAT TERM 1264 954124 - 954151 + G 90 -12.6 -3.84825 | opp_overlap 954111, overlap 954125 GAGTGGCGCCCTGGC AGCAGGCGCCGC GGCC GCTGCGCCTGCA TTTAGTCTGGCTACC TERM 1265 954125 - 954150 + G 87 -16.1 -2.90573 | opp_overlap 954111, overlap 954124 AGTGGCGCCCTGGCA GCAGGCGCCGC GGCC GCTGCGCCTGC ATTTAGTCTGGCTAC TERM 1266 954320 - 954305 - g 91 -6.8 -5.19328 | gap 1, overlap 954306 954307 ATTGCAGAAGAAAAA GC-CCGC GAG GCGGAGC GCAATCAGTACGAGA ftsK 952460 - 956581 + | cell division protein FtsK TERM 1267 956876 - 956856 - g 73 -5.3 -4.66163 | overlap 956858 ACCTTTACTCAAAAA GTCACCGAT GGC AGCGGTGCC GCGGTGCAGGAGGGA lolA 956721 - 957335 + | outer membrane lipoprotein carrier protein precursor TERM 1268 958070 - 958084 + G 74 -7 -4.25104 | overlap 958073 GACCGAGATCGCCGG CGAGCG CAG CGCGCG TTTTGATAACAAAGG ycaJ 957345 - 958688 + | hypothetical protein TERM 1269 958857 - 958873 + F 71 -9.5 -3.18582 | AAAACGTCGCTATTA CGTAAAC GCG GTTTACG TTCATCAATACAATC TERM 1270 959729 - 959740 + G 71 -7.2 -4.03167 | opp_overlap 959728 GCCGATTAAAATGAC GGCG CATA CGCC TTGTTTCCGTTCTGA TERM 1271 960101 - 960089 - g 77 -4.8 -4.8543 | CAAGTCCGACAAAAA GACC CGTCT GGTC CATACCCTGAATGGT serS 958947 - 960239 + | seryl-tRNA synthetase TERM 1272 960265 - 960278 + F 100 -9.5 -5.61596 | opp_overlap 960265 CTCCTCTTCTAAAAA GCGCC TTCG GGCGC TTTTTTTATGCCAGT TERM 1273 960278 - 960265 - f 93 -9.5 -4.56597 | opp_overlap 960265 CTCCTCTTCTAAAAA GCGCC TTCG GGCGC TTTTTTTATGCCAGT TERM 1274 961222 - 961209 - g 71 -9.5 -3.54638 | ATAACCCTGGCGAAA CCCGC ATGA GCGGG GGCGGTGTAACGTAT dmsA 960476 - 962920 + | anaerobic dimethyl sulfoxide reductase chain A precursor dmsB 962931 - 963548 + | anaerobic dimethyl sulfoxide reductase chain B TERM 1275 963816 - 963828 + G 76 -3.3 -5.0538 | opp_overlap 963813 GAGCAATGAAATTGC CAGCG GCT CGGTG TTTTTTGCGGTCGGC dmsC 963550 - 964413 + | anaerobic dimethyl sulfoxide reductase chain C TERM 1276 964468 - 964414 - f 70 -9.9 -3.07816 | opp_overlap 964422 964423 GCGGTAGCCAGCTAA CGCGTTGACGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGCCTTTAGCCG CCATCAATCTAAGGA TERM 1277 964422 - 964460 + F 100 -17.5 -3.53811 | opp_overlap 964414, overlap 964423 CAGCTAACGCGTTGA CGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGCC TTTAGCCGCCATCAA TERM 1278 964423 - 964459 + F 100 -21 -2.72144 | opp_overlap 964414, overlap 964422 AGCTAACGCGTTGAC GCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGC CTTTAGCCGCCATCA TERM 1279 965484 - 965507 + G 80 -8.8 -4.08767 | GCATCGGTTTCTGGA TGGCGGTGCT GGTG AGCGCCGGCA TTTTGGGGCAATGGC ycaD 964763 - 965911 + | probable transport protein TERM 1280 965924 - 965953 + F 100 -10.1 -4.77047 | overlap 965926 TGACTGTTCTCTGAA TTGTATGCAGGAC GTGA GTCTTGCATACTA TTTGTTTATGTTTTA TERM 1281 965926 - 965951 + F 95 -12.7 -3.95749 | overlap 965924 ACTGTTCTCTGAATT GTATGCAGGAC GTGA GTCTTGCATAC TATTTGTTTATGTTT TERM 1282 966176 - 966150 - g 70 -3 -4.73388 | gap 1, opp_overlap 966164 966167, overlap 966167 AATGTGCAGGAAAAA CAGTTGCGATG GTACAA CATCGCC-CTG ATGTCGTTTATTACC TERM 1283 966610 - 966630 + G 72 -4 -4.71223 | overlap 966601 GGTCTGTGGCCGGGA TTGCCATG TTTAT CATGTCAA TTTTATATGTTGTGA TERM 1284 967040 - 967052 + G 70 -3.3 -4.70583 | TACTCTGGGGCAAAT CGCCG CGC TGGTG TTTTCTATTGATGCG ycaM 966129 - 967550 + | probable transport protein TERM 1285 967567 - 967589 + T 73 -7.7 -4.19238 | gap 1 GACGCTCTTTTCCAC GGCGCTC-CT GTCA GGCGAGCGCC TTTTAAGGTTACAGG TERM 1286 967815 - 967794 - T 100 -11.6 -4.39568 | opp_overlap 967794 ATCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGGTAA TERM 1287 967794 - 967815 + T 86 -11.6 -3.53444 | opp_overlap 967794 ATCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGGTAA pflA 968667 - 967843 - | pyruvate formate-lyase 1 activating enzyme SEN0875 969085 - 968759 - | putative conserved hypothetical protein SEN0876 969216 - 970175 + | putative sopD2 type III secretion system effector protein TERM 1288 970219 - 970179 - T 74 -3.4 -4.9725 | gap 1, opp_overlap 970190 970217, overlap 970190 ATGCTTATATAAAAA GTCATTAAAAAGGCCCCAC TGAT ATGGAGCCTTTTTTGT-AC GCTTTTTATGGCGTA TERM 1289 970209 - 970190 - T 84 -7.8 -4.79667 | opp_overlap 970190, overlap 970179 AAAAGTCATTAAAAA GGCCCCAC TGAT ATGGAGCC TTTTTTGTACGCTTT TERM 1290 970190 - 970209 + T 84 -4.9 -5.28826 | opp_overlap 970179 970190 AAAAGTCATTAAAAA GGCCCCA CTGATA TGGAGCC TTTTTTGTACGCTTT pflB 972533 - 970251 - | formate acetyltransferase 1 TERM 1291 970670 - 970684 + g 71 -4.2 -4.65916 | CAGCGCGACGACCAT CCGG GGTGTTA CCGG TTTTCTTACCATACA focA 973450 - 972593 - | probable formate transporter (formate channel) TERM 1292 973803 - 973783 - R 100 -10.4 -5.26247 | gap 1, opp_overlap 973783 CGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC TERM 1293 973783 - 973803 + r 71 -10.4 -2.62184 | gap 1, opp_overlap 973783 CGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC ycaO 975615 - 973855 - | hypothetical protein TERM 1294 974001 - 973970 - G 83 -5.7 -4.85599 | gap 1 GGTAGTCCATAAAAA GCCG-CTTCACCGC TAAGC GCGGCGCTGGCGGC CTCTACAGCCTCTGC TERM 1295 975404 - 975417 + g 81 -3.7 -5.14563 | overlap 975397 975411 TATTCGCCCAGCGCC GAGGC CAGC GCCGC TTTTTTGGTCGCGCC TERM 1296 976126 - 976147 + G 78 -2.3 -5.25803 | GGAAAAACTGCAGCG CTCGAAC ATGACGGA GTTTGAG TTTTTTATGGAGCTT ycaP 975752 - 976444 + | hypothetical protein serC 976630 - 977718 + | phosphoserine aminotransferase TERM 1297 977736 - 977756 + F 100 -10.4 -5.48623 | CGTTTCTTTTTTCAT CCCCACGG CCAGT CTGTGGGG TTTTTATTTCTGTTT TERM 1298 978236 - 978255 + G 74 -7 -4.36914 | opp_overlap 978232 CAGGAAAATTATCCG CCCCTGCG TCTG CGCGGCGG TTTTATCGGCGGCGA aroA 977789 - 979072 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1299 979167 - 979182 + F 81 -3.3 -5.33785 | opp_overlap 979167 TTGTTGATGATTTAA CACAT TGATTT ATGTG TTTTTTATAATAGTT ycaL 979215 - 979976 + | putative lipoprotein cmk 980149 - 980832 + | cytidylate kinase TERM 1300 981120 - 981110 - g 87 -8.2 -4.63527 | overlap 981112 TGAGCAGTTCAAAAA CGCC CAG GGCG AACTGGAAATCCAGG rpsA 980946 - 982619 + | 30S ribosomal protein S1 TERM 1301 982728 - 982698 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 982705, overlap 982701 982705 TCGGCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATCTCACGGCTGCA TERM 1302 982726 - 982701 - f 93 -15.5 -2.84098 | opp_overlap 982705, overlap 982698 982705 GCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATCTCACGGCTG TERM 1303 982705 - 982722 + F 86 -14.1 -3.20382 | opp_overlap 982705 982701 982698 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG TERM 1304 982722 - 982705 - f 90 -14.1 -3.30554 | opp_overlap 982705, overlap 982701 982698 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG himD 982775 - 983059 + | integration host factor beta-subunit (IHF-beta) TERM 1305 983082 - 983112 + F 87 -11.3 -3.86897 | opp_overlap 983090, overlap 983083 983090 CGCAAAACTTGAACC CGAAAAAAGCACC GTCAG GGTGCTTTTTTCA TTTATACGCCGTCAG TERM 1306 983083 - 983111 + F 87 -14.8 -2.91924 | opp_overlap 983090, overlap 983082 983090 GCAAAACTTGAACCC GAAAAAAGCACC GTCAG GGTGCTTTTTTC ATTTATACGCCGTCA TERM 1307 983104 - 983090 - f 87 -7.1 -5.09426 | opp_overlap 983083 983082 983090 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAC TERM 1308 983090 - 983104 + F 90 -7.1 -5.42514 | opp_overlap 983090, overlap 983083 983082 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAC TERM 1309 984575 - 984593 + G 71 -5.9 -4.28656 | overlap 984577 ATGGTACCTGACCGA TCGCGCG TTAGC CGCGCTA TTTTACCTGTTGAAT TERM 1310 984931 - 984948 + G 74 -7.7 -4.21194 | opp_overlap 984930, overlap 984934 TGCGCTGGCATAATC TGACGCC GGAG GGCGTTA TTTTGAGTCATGAGC TERM 1311 984934 - 984945 + G 77 -7.2 -4.22883 | opp_overlap 984930, overlap 984931 GCTGGCATAATCTGA CGCC GGAG GGCG TTATTTTGAGTCATG ycaI 983289 - 985553 + | putative competence-related protein msbA 985590 - 987338 + | probable transport ATP-binding protein MsbA TERM 1312 987557 - 987547 - g 70 -6.8 -4.07568 | TTGGCTGGTGGAAAA GCTG CAA CAGC GTGGCGTGCGCGTGG TERM 1313 987937 - 987900 - g 95 -12.7 -4.08216 | gap 1, opp_overlap 987902 CCAGTCGCCTGAAAA CCGTG-GACGCCGCTATC GTC AATGGCGGCGTCGCCCGG GCAGGCGAAATACCC lpxK 987335 - 988312 + | tetraacyldisaccharide 4'-kinase TERM 1314 989201 - 989189 - g 70 -9.1 -3.62775 | overlap 989178 ACCAGCGCTGAATAA CGCCT TAA AGGCG ACCCATAGCGCAGTG TERM 1315 989211 - 989265 + G 81 -12.8 -3.12936 | overlap 989209 AAGGCGACCCATAGC GCAGTGCTGTCGCCTTTCGATCCTGT GGT ATGGGATCGCAAGCGGGCAGCGCAGC TCTTCGGATTTAACT ycaQ 988356 - 989588 + | hypothetical protein ycaR 989640 - 989822 + | hypothetical protein TERM 1316 990179 - 990163 - g 74 -7.9 -4.08216 | overlap 990164 CCAGGTCGCGGAAAA TCTGGCG CAG CGCCAGG TTGGCATGGCGACGT TERM 1317 990178 - 990164 - g 72 -11.4 -3.04715 | overlap 990163 CAGGTCGCGGAAAAT CTGGCG CAG CGCCAG GTTGGCATGGCGACG kdsB 989819 - 990565 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1318 990607 - 990571 - f 73 -10.9 -2.74371 | opp_overlap 990568, overlap 990568 990605 AATGCGTTAACATGA TCCTGTTCATGATCGTC TTA GACGGTCATGAACAGCG CGGTATGATAGCGCA TERM 1319 990662 - 990675 + F 70 -5.3 -4.45077 | CTAGTGGCAGCTTTC TCGTA CCGT TACGA TTTTCCTCATTTTTC TERM 1320 990861 - 990851 - g 74 -8.2 -4.05446 | opp_overlap 990851 990850 990858 TGCGTGAATGAGAAA GCGG ATT CCGC ATTGTGGTCATTATA SEN0893 990776 - 991669 + | hypothetical protein ycbC 992425 - 991649 - | hypothetical protein TERM 1321 991984 - 991962 - G 70 -9.8 -3.40611 | overlap 991960 TCCAGCGTAATAATA TCGCTACGCG GTA CGCCCAGCGA CTGCGCCACCCGCGC TERM 1322 992087 - 992053 - G 71 -4.9 -4.56597 | gap 1 TGCCGCCGGTAAAAA TCAGCC-TGGCTCCCG GATT CGCGCGCCACAGCCGA ATGCCTTCCGCCAGC smtA 992561 - 993364 + | SmtA protein TERM 1323 994235 - 994206 - g 73 -8.7 -3.87815 | CGTCACGTGCATAAA TTTATCCGTACCG CGAT CGATATGGATAAA AACCGTGTCTTCGCC TERM 1324 994525 - 994552 + G 77 -11.3 -3.49568 | gap 1, opp_overlap 994523, overlap 994495 994523 ATCTGGCGCAATACC CGCGCGCGCGTC ATTTC GACGTG-GCGCG TATTGTTATCGATCA mukF 993357 - 994679 + | killing factor KicB mukE 994660 - 995364 + | KicA protein TERM 1325 996009 - 996019 + G 70 -6.8 -4.20367 | AGCGCCATTACCCGA TCGC TAC GCGA TTATTTATTGCCGGA TERM 1326 996780 - 996757 - g 93 -4.4 -5.4505 | overlap 996760 CGTTGGAACAAAAAA TGAGCGTGGC GCAA ACCGCGCACA GCCAGTTTGAGCAGG TERM 1327 998230 - 998209 - g 70 -8.7 -3.72893 | gap 1, opp_overlap 998208, overlap 998213 CATGGTCGCAGCAAA TGC-AGCGCG ACG CGCGCCAGCA GGCTTTTGCTCTGGC TERM 1328 998349 - 998327 - g 79 -7.6 -4.42238 | overlap 998328 CGATCTCAACGAAAA GCTGCGCCAG CGG CTGGAGCAGG CGGAAGCCGAGCGTA TERM 1329 998348 - 998328 - g 74 -11.1 -3.2486 | overlap 998327 GATCTCAACGAAAAG CTGCGCCAG CGG CTGGAGCAG GCGGAAGCCGAGCGT TERM 1330 998382 - 998402 + G 81 -12.5 -3.07816 | CGCGCCCGCGAAGCG CTGCGCAGC CAT GCCGCGCAG TTAAGTCAGTACAGC mukB 995364 - 999830 + | cell division protein TERM 1331 999942 - 999957 + F 100 -11.8 -5.42975 | TTATCATTAGCCTGG GGCGGC GAAA GCCGCC TTTTTCTTTATCTGA ycbB 1000175 - 1002025 + | hypothetical protein ycbK 1002285 - 1002833 + | hypothetical protein ycbL 1002861 - 1003508 + | hypothetical protein TERM 1332 1003545 - 1003515 - T 93 -14.2 -3.50853 | opp_overlap 1003522, overlap 1003522 GTCTGGTAAGCAGAA TGAAAAAGCCTGCA ATG TGCAGGCTTTTTTA TCGGTCACGCCAGTC TERM 1333 1003538 - 1003522 - T 100 -12.3 -4.95876 | opp_overlap 1003522, overlap 1003515 AAGCAGAATGAAAAA GCCTGCA ATG TGCAGGC TTTTTTATCGGTCAC TERM 1334 1003522 - 1003538 + T 100 -12.3 -5.28176 | opp_overlap 1003522 1003515 AAGCAGAATGAAAAA GCCTGCA ATG TGCAGGC TTTTTTATCGGTCAC aspC 1004760 - 1003570 - | aspartate aminotransferase TERM 1335 1004277 - 1004238 - G 70 -9.2 -3.66556 | gap 1, opp_overlap 1004245 AACCGTGGAACAGAA CCACATCGCCGGCCTGTGC TTC GCTCAGGCTGGCT-TGTAG CGCTTCAAAATCCAG TERM 1336 1004245 - 1004271 + g 100 -15.8 -3.33261 | opp_overlap 1004238 GAACAGAACCACATC GCCGGCCTGTGC TTC GCTCAGGCTGGC TTGTAGCGCTTCAAA TERM 1337 1004345 - 1004357 + g 71 -4.8 -4.5442 | ACTTCCAGGCCGGCA GCGT TAAAC ACGC TTTTGTGGTTCGGCC TERM 1338 1004445 - 1004462 + g 71 -9.8 -3.55761 | overlap 1004446 1004448 1004454 CGGCAATGCGTAACG CGCCGG TACCGC CCGGCG TTTGCGCCGTGCGTG TERM 1339 1004897 - 1004912 + r 89 -9 -4.58395 | opp_overlap 1004897 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA TERM 1340 1004912 - 1004897 - R 100 -9 -5.77988 | opp_overlap 1004897 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA ompF 1006036 - 1004945 - | outer membrane protein F precursor TERM 1341 1006468 - 1006478 + r 72 -2.6 -5.04597 | opp_overlap 1006453 1006452 1006468, overlap 1006453 TAATCCGCAATAAAA TTAA GGA TTAA TTTTTATGTGTAAAT TERM 1342 1006595 - 1006611 + r 86 -13.7 -3.12999 | opp_overlap 1006595 TCAGGCGAAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGACGTAA TERM 1343 1006611 - 1006595 - R 100 -13.7 -5.78622 | opp_overlap 1006595 TCAGGCGAAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGACGTAA asnS 1008030 - 1006630 - | asparaginyl-tRNA synthetase TERM 1344 1007140 - 1007126 - G 78 -7.1 -4.60797 | TCGGTAGAGACAAAA CGCTC CAGAC GAGCG ATAGCGTCTTTATCT TERM 1345 1007625 - 1007581 - G 70 -9.3 -3.67597 | CTGCTCATCGAAGAA GCGAT-GCAGCGCCTGCGCCA GAGTA TGGCGAACGCGC-GCTACCGC GCCAATCAGGTTGGT TERM 1346 1008191 - 1008172 - R 74 -5.7 -4.6526 | AGAAACCTGTAAAAA GTTCGCA CCTGCT CGCGAAC CATTGAGAATTTAGG SEN0905 1008692 - 1008231 - | putative transcriptional regulator TERM 1347 1008333 - 1008320 - G 79 -3.1 -5.13722 | CTGAGGAAAAGAAAA GCTCA CGGG TAAGC GCTTCATATTCCGCC TERM 1348 1009945 - 1009956 + G 77 -4.4 -4.88918 | GCCTATTATTCGGGA CAAC ACCA GTTG TTTTATTTCCGCTGA SEN0906 1009010 - 1010224 + | diaminopropionate ammonia-lyase (ec 4.3.1.15) (diaminopropionatase) (alpha,beta-diaminopropionate ammonia-lyase) TERM 1349 1010286 - 1010270 - f 75 -2.9 -5.1101 | overlap 1010258 1010271 GCAGCATGTAAAAAA CGCGTTT TTT ATACGCA TAATAAACCTAATGC TERM 1350 1010506 - 1010517 + G 75 -5.8 -4.62708 | CTCTTTGAATTTCTA TGGG GTGG CCCA TTATTTTTGTGTGTT SEN0907 1010470 - 1011906 + | putative ion:amino acid symporter TERM 1351 1011972 - 1011946 - T 85 -12.3 -3.41745 | overlap 1011950 TGGTCAGAAGAGTAA CAAAGCGCCCA CTTTC CGGGCGCTTCG CACAGGCATGGTTAA TERM 1352 1011968 - 1011950 - T 87 -9.5 -4.34759 | overlap 1011946 CAGAAGAGTAACAAA GCGCCCA CTTTC CGGGCGC TTCGCACAGGCATGG pncB 1013186 - 1011984 - | nicotinate phosphoribosyltransferase (ec 2.4.2.11) (naprtase) TERM 1353 1014237 - 1014253 + H 75 -2.9 -5.1356 | overlap 1014239 TGAACCAATAAACAT TTTCCTG ATT CGGGATA TTTTTCTTAATCAGG TERM 1354 1014912 - 1014926 + H 100 -7.1 -6.02914 | TTGATATTAGTGTAA TGCCC GATAA GGGCA TTTTTTTTGTCTCCA SEN0912A 1015048 - 1016757 + | Chimeric prophage tail protein (the product of a deletion event) TERM 1355 1017144 - 1017111 - g 77 -8.3 -4.08064 | gap 2, overlap 1017118 1017129 AAGGTCTGGGTAAAA GACGAAGC-G-GCTG AAAAAG CAGCGCAGCTTCGTC AGGCGGAAGAAACCA SEN0913 1016757 - 1017338 + | phage tail fibre assembly protein sseI 1017816 - 1018784 + | putative type III secreted protein TERM 1356 1018942 - 1018922 - T 84 -7.5 -4.82128 | overlap 1018923 TCAGGAAAGAGAAAA GCCAGTCGC TGT ACGACTGGA TACAGGCGCAGTTGA TERM 1357 1018941 - 1018923 - T 82 -11 -3.48193 | overlap 1018922 CAGGAAAGAGAAAAG CCAGTCGC TGT ACGACTGG ATACAGGCGCAGTTG SEN0917 1020058 - 1019432 - | hypothetical protein TERM 1358 1020313 - 1020298 - R 100 -6.8 -5.96219 | opp_overlap 1020297 1020298 GAGCCATAAAAAAAA CAGCCC TGAC AGGCTG GTTTTTAAGGGGAAT SEN0920 1021104 - 1020418 - | prophage encoded virulence factor SEN0921 1021566 - 1021375 - | prophage encoded virulence protein TERM 1359 1023516 - 1023496 - g 73 -5.3 -4.56775 | ATTCCGTTGCAAAAA GGCGGTCAC CCG GTCAACGCC GTGCTGAACGTCACG pepN 1021993 - 1024605 + | aminopeptidase N TERM 1360 1024633 - 1024661 + F 100 -13.2 -5.40072 | gap 1, opp_overlap 1024633 1024631 1024629 1024624 TAAAGAGGTAAGACA TGCCCGGTAAGCG TTAG CGCT-GCCGGGCA TTTTTTTGCCGGACG TERM 1361 1024661 - 1024633 - f 77 -11 -3.14671 | gap 1, opp_overlap 1024633, overlap 1024631 1024629 1024624 TAAAGAGGTAAGACA TGCCCGGTAAGCG TTAG CGCTG-CCGGGCA TTTTTTTGCCGGACG pyrD 1024813 - 1025823 + | dihydroorotate dehydrogenase TERM 1362 1025842 - 1025871 + F 78 -5.7 -4.84918 | opp_overlap 1025842 TTAGCCTTTATCAGA CAACCAGGGCT TTATTTCC GGCGCTGGTTG TTTTATATTTCTCCA TERM 1363 1026109 - 1026131 + G 86 -6.8 -4.99035 | CGTAAAATGCTTACG CCGGACGCGT TTT GCCCGACCGG TTTTTGTGTGGATGA ycbW 1025989 - 1026531 + | hypothetical protein SEN0925 1027637 - 1026528 - | hypothetical protein TERM 1364 1029109 - 1029098 - g 83 -7.2 -4.59773 | opp_overlap 1029097 1029098 1029101 GTGGATGCGCAAAAA GCGC GGCA GCGC CTGTTCGATATTATT ycbY 1027736 - 1029844 + | hypothetical protein TERM 1365 1030966 - 1030946 - g 74 -9.7 -3.6608 | overlap 1030932 ACCACGCTACTGAAA CTGATGCTG GGA CAGCTTCAG GCTGACAGCGGGCGC TERM 1366 1031168 - 1031153 - g 81 -11.8 -3.59979 | opp_overlap 1031163 1031164 CTGTTTCACCCCAAA CGGGCG ATGA CGCCCG TCCGCGCGCTTTCCG TERM 1367 1031626 - 1031641 + G 80 -4.6 -5.00616 | overlap 1031614 AGCGCTACAGGCGCA GGTTGC GGAT GCGGCC TTTTTTAGCCAACCC uup 1029857 - 1031764 + | ABC transporter ATP-binding protein pqiA 1031779 - 1033032 + | putative inner membrane protein TERM 1368 1033884 - 1033863 - g 79 -3 -5.19212 | ACGACGATCAAAAAA GTATTCAG GATTCG CTGTATAC CGATCATATCGATTA TERM 1369 1034175 - 1034157 - g 80 -8.8 -4.07568 | GCGCTTCGCTTAAAA CCGGTAAC CTG GTGACCGG GGCGCTGTATGTCGA TERM 1370 1034384 - 1034362 - g 71 -10.6 -3.25169 | opp_overlap 1034364, overlap 1034354 1034376 1034377 TGAACAAGCGACCAA TACGCTGTCT GAA AGCCAGCGTA CTATGCGTCGGCTGC pqiB 1033037 - 1034677 + | putative secreted protein TERM 1371 1034755 - 1034744 - g 72 -2.2 -4.84311 | GCGGAGAGAATAAAA GCTA TTAT CAGC TCCCGATAGCGCAAA ymbA 1034674 - 1035237 + | putative lipoprotein TERM 1372 1035286 - 1035260 - f 70 -9.4 -3.30781 | opp_overlap 1035260 GTAATGTAAATTTAA CCGCTTCAGG TCGTGCG CCTGAGGCGG TTTTTTTATTTTTGA TERM 1373 1035260 - 1035286 + F 100 -12.3 -6.20267 | opp_overlap 1035260 GTAATGTAAATTTAA CCGCTTCAGGT CGTGC GCCTGAGGCGG TTTTTTTATTTTTGA TERM 1374 1035428 - 1035450 + F 71 -7.1 -4.16397 | overlap 1035421 1035427 AGGTATTCGTGTAGT GTGATTGCA CATTT TGTAATCAC TGTTTTCTTTTCCAC rmf 1035493 - 1035660 + | ribosome modulation factor (protein E) TERM 1375 1035677 - 1035707 + T 74 -8.2 -3.95219 | opp_overlap 1035680 1035684, overlap 1035684 1035705 TCTGTCTCTTTAGAA AAAGAAACCTCCGC AGT GCGGAGGTTTCGCC TTTATGGGCTTTGCA TERM 1376 1035704 - 1035680 - T 100 -18.7 -4.82901 | opp_overlap 1035677 1035684, overlap 1035684 GTCTCTTTAGAAAAA GAAACCTCCGC AGT GCGGAGGTTTC GCCTTTATGGGCTTT TERM 1377 1035700 - 1035684 - T 100 -13.7 -4.96501 | opp_overlap 1035677 1035684, overlap 1035680 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATGGG TERM 1378 1035684 - 1035700 + T 100 -13.7 -3.74347 | opp_overlap 1035684 1035680, overlap 1035677 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATGGG fabA 1036278 - 1035760 - | D-3-hydroxydecanoyl-(acyl carrier-protein) lonH 1037933 - 1036347 - | hypothetical protein TERM 1379 1038268 - 1038251 - H 72 -2.7 -5.04385 | overlap 1038266 CAGATGGCTAAAAAA CTGATAT TCTG ATAACAG TTACACGGTAACGTT ycbG 1038293 - 1038745 + | hypothetical protein TERM 1380 1038806 - 1038773 - T 83 -14.1 -2.64616 | gap 1, opp_overlap 1038783, overlap 1038775 1038783 TTGTCACCCAGACCA GAGCAAAAAACCCCGC GAC GCGGGGTTTTTTA-TC AGACGGAAACTTAAG TERM 1381 1038805 - 1038775 - T 82 -13.4 -2.8655 | opp_overlap 1038783, overlap 1038773 1038783 GTCACCCAGACCAGA GCAAAAAACCCCGC GAC GCGGGGTTTTTTAT CAGACGGAAACTTAA TERM 1382 1038797 - 1038783 - T 100 -12.8 -5.23316 | opp_overlap 1038783, overlap 1038775 1038773 GACCAGAGCAAAAAA CCCCGC GAC GCGGGG TTTTTTATCAGACGG TERM 1383 1038783 - 1038797 + T 100 -12.8 -5.24129 | opp_overlap 1038783 1038775 1038773 GACCAGAGCAAAAAA CCCCGC GAC GCGGGG TTTTTTATCAGACGG ompA 1039869 - 1038817 - | outer membrane protein A TERM 1384 1040157 - 1040124 - R 78 -5.4 -4.80882 | gap 1, opp_overlap 1040126 1040134, overlap 1040126 1040134 ATCGTACAGCAAAAA TTGCGGAAACCGCTT CTGAC AAGCGTTCT-CGCAA AAAAAACGTTAGCAC sulA 1040735 - 1040226 - | cell division inhibitor TERM 1385 1041529 - 1041492 - g 71 -10.6 -3.25823 | gap 2, overlap 1041493 GTCGGCGTACATGAA GCGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCGA CTGGGCTCATTCGCT TERM 1386 1041528 - 1041493 - g 81 -14.1 -2.55351 | gap 2, overlap 1041492 TCGGCGTACATGAAG CGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCG ACTGGGCTCATTCGC yccR 1040952 - 1041557 + | hypothetical protein yccS 1043697 - 1041544 - | hypothetical protein TERM 1387 1042125 - 1042114 - G 73 -5.8 -4.41348 | GTCCGGCCAAATAAA GCTG ACCG CAGC CCAGGCGATAGCGCA TERM 1388 1042370 - 1042335 - G 87 -8.3 -4.67256 | GAACAAACCATAAAA TCGGCAGGCCGATAG CAACGC CTACCAACGTGCCGA TAATCCTGAGCGCAA TERM 1389 1042742 - 1042730 - G 83 -10.5 -3.9281 | AGCAGCTCTAAAGAA GCGCC GCT GGCGC GCATACGTTCAAGCG TERM 1390 1042793 - 1042779 - G 70 -10 -3.35522 | overlap 1042777 1042790 CAATGTGGGTAAAGA CGCGTT CAA AACGCG GATCATGCTGGTACG TERM 1391 1043757 - 1043726 - R 72 -6.5 -4.21194 | gap 1, opp_overlap 1043727 1043742, overlap 1043727 CCCGATCATTCAAAA CGGCGGCGCGCG TTAGCTTCT CGCGCGGCGC-G AGCGGTTTCTACAGA yccF 1044162 - 1043716 - | hypothetical protein TERM 1392 1043742 - 1043762 + g 73 -8.9 -3.85698 | opp_overlap 1043726 1043727 GGCGGCGCGCGTTAG CTTCTCGCG CGG CGCGAGCGG TTTCTACAGAGACGA TERM 1393 1045263 - 1045243 - g 78 -2.3 -5.28176 | overlap 1045244 TGTAGCGAGAAAAAA GCGCAGGCC AAA GGCTGGCGT CAGTGGCTGGAAGAG TERM 1394 1046178 - 1046192 + G 77 -8.6 -4.08216 | GGAAAGTGCGCTTCT TCCTCA GGT TGAGGA TTTTCCGGACGCTGA TERM 1395 1046227 - 1046263 + G 76 -5 -4.72986 | gap 1, overlap 1046230 CGGCGTTTGTTATAT GTGGCGTTGACGCGCGC GCGT GCGCGGGTCTG-GCTGC TTTTTAATAAAGATA helD 1044286 - 1046340 + | helicase IV (75 kD helicase) TERM 1396 1046370 - 1046342 - T 88 -12.3 -3.61764 | opp_overlap 1046338 1046365, overlap 1046334 1046343 CGAGGAAGCCCTAAA GCGCGGGCGGTAC AGC ATCCCGCCCGCGT AGCGGTTATTTCAGG TERM 1397 1046369 - 1046343 - T 93 -15.8 -2.76737 | opp_overlap 1046338 1046365, overlap 1046334 1046342 GAGGAAGCCCTAAAG CGCGGGCGGTAC AGC ATCCCGCCCGCG TAGCGGTTATTTCAG TERM 1398 1046365 - 1046375 + T 74 -8.2 -3.9122 | opp_overlap 1046343 1046342, overlap 1046338 GGTACAGCATCCCGC CCGC GTA GCGG TTATTTCAGGCGCTC mgsA 1046834 - 1046376 - | methylglyoxal synthase yccT 1047591 - 1046929 - | putative secreted protein TERM 1399 1047255 - 1047240 - G 77 -8.2 -4.07568 | opp_overlap 1047246 CGTCGCCGTCCAAAA GCGCCA GACG CGGCGC CGCGTTAAAATGCGA TERM 1400 1047495 - 1047467 - G 70 -6.6 -4.15044 | overlap 1047469 GCGCCGCGTAATAAA GAGCTGGACACC TTTTT GCCGTCCAGCAC CAGCAGATCAACCTC SEN0943 1047762 - 1048178 + | hypothetical protein TERM 1401 1048218 - 1048181 - T 73 -4.1 -4.86731 | opp_overlap 1048189, overlap 1048182 1048188 1048189 GCTGGCGAAATAAAA GTTTAAATGGCCGGATA TCGC TCTCCGGCCTTTTACAT ACAATCAGTTACGTA TERM 1402 1048189 - 1048210 + T 83 -10.1 -4.1899 | opp_overlap 1048188 1048182 1048181 1048189 AATAAAAGTTTAAAT GGCCGGATA TCGC TCTCCGGCC TTTTACATACAATCA yccV 1048540 - 1048223 - | hypothetical protein yccW 1049809 - 1048598 - | hypothetical protein SEN0946 1050024 - 1050572 + | hypothetical protein SEN0947 1050598 - 1051377 + | putative transcriptional regulator yccX 1051426 - 1051707 + | putative acylphosphatase yccK 1052033 - 1051704 - | hypothetical protein in helD-serT intergenic region TERM 1403 1051768 - 1051799 + g 84 -5.8 -5.06414 | TTTGCCGGGCCTTTC GGGAACAGACGATA CAGA TAGCGGCTGTTGCC TTTTTCTTCGCCGAA TERM 1404 1052104 - 1052079 - R 91 -7.5 -5.15634 | overlap 1052083 CAGTGTAGCAAAAAA TAAAGCCCTGC ATAA GCAGGGCTGGA AGAGGGGAATGTCGA TERM 1405 1052100 - 1052083 - R 100 -12.7 -5.0917 | overlap 1052079 GTAGCAAAAAATAAA GCCCTGC ATAA GCAGGGC TGGAAGAGGGGAATG yccA 1052698 - 1052120 - | hypothetical protein TERM 1406 1052976 - 1052954 - R 79 -7.6 -4.4009 | overlap 1052957 CGCTACGCCATAAAA CAGGCGGCTG CGC CAGCCACGCG TTACCGATAAAAAAT TERM 1407 1053269 - 1053297 + r 100 -12.6 -5.12617 | gap 1, opp_overlap 1053272, overlap 1053272 TTCCGCCAGATTAAA C-AAGGGGTTACC GAAA GGTAACCCCTTTG TTTTTTGGGTGCTTA TERM 1408 1053293 - 1053272 - R 100 -14.5 -4.04806 | opp_overlap 1053269 1053272 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAACCCC TTTGTTTTTTGGGTG TERM 1409 1053272 - 1053293 + r 100 -14.5 -5.0666 | opp_overlap 1053272, overlap 1053269 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAACCCC TTTGTTTTTTGGGTG pipA 1054078 - 1053398 - | pathogenicity island protein pipB 1055173 - 1054298 - | pathogenicity island protein TERM 1410 1055564 - 1055552 - R 72 -4.8 -4.59109 | TAGATGGCGTAAAAA CCTG ATGAG CAGG AATACTTACACACTA pipC 1056062 - 1055721 - | cell invasion protein TERM 1411 1055843 - 1055871 + g 72 -11.7 -2.71731 | opp_overlap 1055820, overlap 1055845 AAGCAGTATTGTCTG CGTCAGCGCCG ATAGTGA CGGCGCTGGTG TAGTTCAGACGTAAA sopB 1057764 - 1056079 - | cell invasion protein TERM 1412 1058130 - 1058142 + G 74 -3.4 -4.88228 | CAAGTAAGACCGTGA CGAA GAATA TTCG TTTTTCCTATTCCAT orfX 1058096 - 1058266 + | hypothetical protein SEN0957 1058377 - 1058267 - | hypothetical protein pipD 1059955 - 1058486 - | putative secreted peptidase TERM 1413 1059533 - 1059570 + g 75 -3.6 -4.85599 | gap 1 CGATTGCGCCACTGG CAGG-ATCACGGA CTCAATGGCGTCT TCCGTGATTCCTG TTTTTGTCACGTAAG copS 1061492 - 1060128 - | histidine kinase copR 1062231 - 1061485 - | response regulator TERM 1414 1062428 - 1062418 - g 71 -8.2 -3.82208 | overlap 1062410 CAGCAAACAGGCAAA CCGG CGC CCGG CGTGGAGGTGGTACT SEN0961 1062301 - 1062711 + | hypothetical protein TERM 1415 1062969 - 1062937 - T 76 -12 -2.50443 | overlap 1062936 TTAGATTGTATTAAT CGCCGCGATTTATG GCGAG CAAACATCGCGGCG GGAATAAAAATCTTC hpaC 1063556 - 1063044 - | 4-hydroxyphenylacetate 3-monooxygenase coupling protein hpaB 1065136 - 1063574 - | 4-hydroxyphenylacetate 3-monooxygenase TERM 1416 1064855 - 1064871 + g 91 -12.3 -4.07568 | AGCATCACGCTGTTG GCGCAGA TCG TCTGCGC TTTTCGCAACGCGGA TERM 1417 1065058 - 1065072 + g 70 -3.4 -4.70266 | AAATATAAATTTCCC GCCCGT CCT GCAGGC TTTTTAAATACTCTT hpaR 1065794 - 1065354 - | homoprotocatechuate degradative operon repressor TERM 1418 1065411 - 1065430 + g 76 -2.9 -5.02074 | gap 1, overlap 1065414 AATAAGATCGTCCAG CAGCAGCA TCAAT TGCTG-TG TTTTTTCGGGCGTGA TERM 1419 1066394 - 1066370 - g 72 -11.5 -3.06696 | overlap 1066393 GCCTGCCGGAAGAGA GCTTTTATCGC CCG GCGATTAAAGC GAAATGTCGCGATGG TERM 1420 1067055 - 1067045 - g 87 -8.2 -4.56775 | opp_overlap 1067049 1067052 ATCTGCGGGTAAAAA GCCG CGA CGGC CTGACGCCGATAGGC hpaG 1066069 - 1067358 + | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase TERM 1421 1067664 - 1067648 - g 72 -3.5 -4.82667 | opp_overlap 1067661 TCACCAGACTAAAAA CGTGCTG ATC CCGCGCG CCTCGCATAACTTCG hpaE 1067355 - 1068821 + | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (ec 1.2.1.-) (chms dehydrogenase) hpaD 1068823 - 1069674 + | 3,4-dihydroxyphenylacetate 2,3-dioxygenase hpaF 1069684 - 1070064 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 1422 1070285 - 1070264 - g 71 -4.3 -4.60889 | overlap 1070251 1070266 AATCAGGCTGAAAAA CAGCGTGAA CAAA TTCGCGCAG TGTCGCTGGATTATC hpaH 1070207 - 1071010 + | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 1423 1071053 - 1071029 - g 72 -2.1 -4.85267 | overlap 1071022 1071030 1071041 1071051 AGAAACGATGAAAAA TGCTTTCAAAG ACG CGTTAAAAGCG GGGCGCCCGCAAATC TERM 1424 1071063 - 1071051 - g 86 -10.5 -4.11773 | overlap 1071030 1071029 1071041 AAAGACGCGTTAAAA GCGGG GCG CCCGC AAATCGGTTTGTGGC hpaI 1071021 - 1071812 + | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 1425 1072479 - 1072500 + G 73 -5.1 -4.65747 | overlap 1072477 TGGCAGTGGTTATTC CTGTTGGAA GGAT TTCCGTCAG TTTTGTTAGGCATTA hpaX 1071885 - 1073261 + | putative 4-hydroxyphenylacetate permease TERM 1426 1073377 - 1073411 + G 86 -6.5 -5.0538 | gap 1, overlap 1073378 GTATGGCGGATTTCT TTGGTCGTGAT-ATGC AGGC GCATCGCCACGACCAG TTTTTTCAAATGCAC hpaA 1073271 - 1074167 + | 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein TERM 1427 1074741 - 1074761 + G 71 -6.2 -4.25104 | gap 1 TTCCCCTTTCCCGGA CGGTGAAGC GTTT GCTT-ACCG TTTTGATACCCAGGG TERM 1428 1074930 - 1074917 - g 72 -3.8 -4.74103 | TTGGCAACGGAAAAA CGCT GGCTGA AGCG ATTGCGTCGCATCAC SEN0973 1074202 - 1075119 + | hypothetical protein TERM 1429 1075169 - 1075139 - T 84 -10.4 -3.94409 | opp_overlap 1075138 1075143 1075158, overlap 1075140 1075143 CAGAGCAGGGATAAA CCCACGGGCTGACA TGA TGTCAGCCCGTTAT GCTTTTGGCGATCAG TERM 1430 1075168 - 1075140 - T 85 -13.9 -2.96164 | opp_overlap 1075138 1075143 1075158, overlap 1075139 1075143 AGAGCAGGGATAAAC CCACGGGCTGACA TGA TGTCAGCCCGTTA TGCTTTTGGCGATCA TERM 1431 1075165 - 1075143 - T 100 -17.8 -2.71325 | opp_overlap 1075143 1075138 1075158, overlap 1075140 1075139 GCAGGGATAAACCCA CGGGCTGACA TGA TGTCAGCCCG TTATGCTTTTGGCGA TERM 1432 1075143 - 1075165 + T 100 -17.8 -3.68359 | opp_overlap 1075140 1075139 1075143, overlap 1075138 1075158 GCAGGGATAAACCCA CGGGCTGACA TGA TGTCAGCCCG TTATGCTTTTGGCGA SEN0974 1075889 - 1075527 - | hypothetical protein TERM 1433 1076523 - 1076494 - R 82 -11.4 -3.64703 | gap 1, opp_overlap 1076495, overlap 1076495 CCGGGTGCATGTAAA TCCG-GGGTGGGC AGAAA GCCCACCCTCGGT TTATTGCCTTTATCG TERM 1434 1076495 - 1076522 + r 100 -14.9 -4.30933 | gap 1, opp_overlap 1076494 1076495 CGGGTGCATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC TERM 1435 1076522 - 1076495 - R 87 -14.9 -2.78679 | gap 1, opp_overlap 1076495, overlap 1076494 CGGGTGCATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC yccD 1076848 - 1076543 - | hypothetical protein TERM 1436 1076706 - 1076675 - G 72 -11.5 -3.05596 | opp_overlap 1076675 CAGCTCCTCACGTAA GCGTAGCGCGCGT TGTACC ACGCTCGCTGCGC GATCGTCGAATTGCC cbpA 1077768 - 1076848 - | curved DNA-binding protein TERM 1437 1077359 - 1077377 + g 74 -7.4 -4.1552 | overlap 1077356 GAATAGCTAATCGTA CGCTGG TGCTCTT CCAGCG TTTCTTCCAGGAATA scsA 1078004 - 1078366 + | membrane protein, suppressor for copper-sensitivity A TERM 1438 1079541 - 1079552 + G 72 -3.6 -4.74103 | TGTTGTTTAGCGCCA GCCT GTTC GGGC TTTTTGAGTTCAGGC TERM 1439 1079700 - 1079737 + G 95 -14.1 -3.35813 | overlap 1079695 1079702 GCACGGCGGTCGCGG TGGCGCTCACGGCGTCG TTGC CGACGCTGTGGGGGCTG TTCCTTGCGCTAGGC TERM 1440 1079702 - 1079735 + G 100 -16.7 -3.24825 | overlap 1079695 1079700 ACGGCGGTCGCGGTG GCGCTCACGGCGTCG TTGC CGACGCTGTGGGGGC TGTTCCTTGCGCTAG scsB 1078415 - 1080301 + | membrane protein, suppressor for copper-sensitivity B precursor scsC 1080298 - 1080921 + | secreted protein, suppressor for copper-sensitivity C precursor TERM 1441 1080911 - 1080898 - f 83 -4.5 -5.27335 | overlap 1080899 GTGGTGAAAGAAAAA CTGGC GGCT GCCAA TGGCGGCTAAACTGC TERM 1442 1080923 - 1080950 + G 77 -4.8 -4.84359 | gap 1, overlap 1080914 1080913 CCAATGGCGGCTAAA CTGCGGCGTTGGC TGC GTGAA-GCCGCGG TTTTTCTGGCGCTCC TERM 1443 1081214 - 1081180 - g 86 -10.6 -4.19238 | GGCTGAAGGGGAAAA CGTCATGACCGTTGCG CTC CGCTCCGGCGATGACG CTGAGGTTGCCCGCT scsD 1080911 - 1081417 + | secreted protein, suppressor for copper-sensitivity D TERM 1444 1081442 - 1081421 - T 82 -12.9 -3.03903 | opp_overlap 1081416 1081415 AAAACGTTCTGAATA TGCGCCGGG GTTT CCCGGCGCT AACGCGTTTACTGTA TERM 1445 1082827 - 1082789 - T 76 -8.1 -4.09511 | gap 1, opp_overlap 1082785 1082793 1082797 1082798, overlap 1082792 AACACTGCTGCAAAA TAGC-CATATGCCCCCGC GCAG GCGGGGGCGTTTGTGTTA TACGTTTTTACGTTC TERM 1446 1082793 - 1082822 + T 100 -15.7 -3.34591 | opp_overlap 1082792 1082789, overlap 1082785 1082797 1082798 CTGCTGCAAAATAGC CATATGCCCCCGC GCAG GCGGGGGCGTTTG TGTTATACGTTTTTA TERM 1447 1082797 - 1082818 + T 100 -15.1 -4.28791 | opp_overlap 1082792 1082789, overlap 1082793 1082785 1082798 TGCAAAATAGCCATA TGCCCCCGC GCAG GCGGGGGCG TTTGTGTTATACGTT TERM 1448 1082798 - 1082817 + T 100 -16.4 -3.1619 | opp_overlap 1082792 1082789, overlap 1082797 1082793 1082785 GCAAAATAGCCATAT GCCCCCGC GCAG GCGGGGGC GTTTGTGTTATACGT yccJ 1083052 - 1082825 - | hypothetical protein wraB 1083669 - 1083073 - | trp repressor binding protein ymdF 1084054 - 1084221 + | hypothetical protein TERM 1449 1084281 - 1084298 + F 100 -14.1 -6.02919 | CGTCATGCGCCACCG CCGCCGG ATTT CCGGCGG TTTTTTTGTTTATAA TERM 1450 1084436 - 1084415 - g 77 -8.1 -4.08767 | gap 1 GCCACCGGTGCAAAA CGGCAGCTTA TCT TAA-CTGCCG CGCTTGCTGTTTTTT TERM 1451 1084798 - 1084781 - g 74 -3.4 -4.84527 | gap 1 TTGATAGATGAAAAA TCCGCGC TGATT GC-CGGA TGGGTGCACAGCGGG ycdC 1084358 - 1084996 + | putative transcriptional regulator SEN0986 1085388 - 1084993 - | putative secreted protein TERM 1452 1085430 - 1085413 - R 93 -9.1 -4.7373 | opp_overlap 1085413 TGACGCGAGTAAAAA GGCTCCA TTGA CGGAGCC TTAATTAACCACAGT TERM 1453 1085470 - 1085492 + r 75 -9.8 -3.59979 | TTGTCATCAGGCTGG CATTACCGCC AGC GGCGGCAGTG TTTACGCTCAGCGAA SEN0986A 1089427 - 1085447 - | proline dehydrogenase (proline oxidase) TERM 1454 1089278 - 1089290 + g 74 -7.7 -4.1585 | overlap 1089275 CGCAGGTAGCTCCGG TAGCG TAT CGCTA TTTTCCAGCTTGTCC TERM 1455 1089962 - 1089980 + G 70 -6.6 -4.19371 | overlap 1089977 TGACTATATTCTTGG CGGTCGCA GCC TGGGGCCG TTTGTTACGGCTTTA putP 1089849 - 1091357 + | sodium/proline symporter (proline permease) TERM 1456 1091362 - 1091393 + F 71 -7.3 -4.07568 | opp_overlap 1091359 1091358 1091362, overlap 1091364 AGGCGGAATAACCGA CATGTCCGATAGC ATTATC GCCATCGGACATA TTTTACCAGGCGGCG TERM 1457 1091393 - 1091362 - f 78 -12.4 -2.65808 | opp_overlap 1091362 1091364, overlap 1091359 1091358 AGGCGGAATAACCGA CATGTCCGATAGCA TTAT CGCCATCGGACATA TTTTACCAGGCGGCG TERM 1458 1091364 - 1091391 + F 75 -9.9 -3.63744 | opp_overlap 1091362 1091359 1091358, overlap 1091362 GCGGAATAACCGACA TGTCCGATAGC ATTATC GCCATCGGACA TATTTTACCAGGCGG TERM 1459 1091399 - 1091424 + F 90 -15.5 -2.66964 | gap 1, opp_overlap 1091394, overlap 1091396 ATCGGACATATTTTA CCAGGC-GGCGT TAT ACGCCTGCCTGG TCCTCTGATAAGTCC TERM 1460 1092163 - 1092148 - f 74 -5.4 -4.56597 | overlap 1092157 GCGTCGTTTCAAAAA GCAAGC TAAG GCTTAC AAGGAAGCCAACCCT TERM 1461 1092996 - 1093006 + G 71 -8.2 -3.85698 | CAAAGACGACTGCGT GCGC TCG GCGC TTTGTCAGCGAACGC phoH 1092184 - 1093038 + | PhoH protein (phosphate starvation-inducible protein PsiH) TERM 1462 1093054 - 1093077 + T 95 -14.6 -3.58905 | opp_overlap 1093046, overlap 1093058 TATAGCATTGACTTT CAGAGCCCGG GAGA CCGGGCTTTG TTGTCTATAAAGCGT TERM 1463 1093058 - 1093073 + T 100 -11.8 -4.42974 | opp_overlap 1093046, overlap 1093054 GCATTGACTTTCAGA GCCCGG GAGA CCGGGC TTTGTTGTCTATAAA SEN0988 1094025 - 1093144 - | putative transcriptional regulator SEN0989 1095807 - 1094311 - | putative sodium/glucose cotransporter TERM 1464 1094546 - 1094532 - G 74 -2.8 -4.86731 | CTCGTTTAAAGAAAA TGCCCA GCA TGAACA GACCGGTCATTGGCC TERM 1465 1095970 - 1095949 - R 79 -8.7 -4.24948 | TCATGAGATGTAAAA GGCAGAGCA TTTA TGCTCCACC AATGGTGATGCCCAG SEN0990 1096824 - 1096144 - | hypothetical protein TERM 1466 1096362 - 1096325 - G 77 -11.3 -3.58343 | opp_overlap 1096323 GTCACCATTGCCAAA TCTGGCTCAACCGGC GTGATGGG GCCGGTATAGCCAGA CAGTGTTGTACCAAT TERM 1467 1096756 - 1096783 + g 71 -6.3 -4.35518 | gap 1 AGGGCTGCCTGGTAC CGGTTGGCATGA GACAA TCA-GCCCACCG TTTTCGTGTACACTT TERM 1468 1097665 - 1097653 - g 100 -5.5 -5.81412 | CGTAGGGAAAAAAAA CAGTG AAT CACCG TTGCAGGTTTATAGC TERM 1469 1098450 - 1098468 + G 71 -6.1 -4.25056 | CGTCTGTAACCTCCT TTACCAT GCGTG ATGGTAA TTTATTAATAAAATA SEN0991 1097330 - 1098484 + | exported protein SEN0992 1098530 - 1099222 + | putative secreted protein SEN0993 1099505 - 1100785 + | putative transporter TERM 1470 1101611 - 1101598 - g 81 -2.4 -5.41746 | overlap 1101602 AAGCGGGCAAAAAAA CACA CTTTCT TGTG CATGAAAGCCAGGCG SEN0994 1100796 - 1101902 + | putative oxidoreductase SEN0995 1102362 - 1102069 - | hypothetical protein SEN0996 1103210 - 1102512 - | hypothetical protein TERM 1471 1102923 - 1102933 + g 77 -4.6 -4.96848 | AGCTCTGTTCAAAAA CGCT CCC GGCG TTTTTGTGTCGAACC TERM 1472 1103019 - 1103000 - G 100 -10 -4.9755 | opp_overlap 1102998 1103000 ATATATAAGCAAAAA GCCCGTAC TTCT GTACGAGC TCTTTCTTGAATATG SEN0998 1103671 - 1103213 - | hypothetical protein SEN0999 1104166 - 1103795 - | hypothetical protein SEN1000 1104615 - 1104175 - | hypothetical protein SEN1001 1105525 - 1104635 - | putative DNA-binding protein TERM 1473 1104951 - 1104963 + g 74 -2 -5.02287 | GTATCTTCATTTTCA TTGT CATAA ACAA TTTTATCTTTTTCTG SEN1002 1106019 - 1105540 - | hypothetical protein SEN1003 1107398 - 1106007 - | hypothetical protein TERM 1474 1106330 - 1106353 + g 71 -8 -3.91434 | opp_overlap 1106320 1106316, overlap 1106331 1106344 1106346 AGTCACGCAGATTCT GGCGCGCCTG CTGC CAGCCGCGCA TTTGTGGGCTGCTTT TERM 1475 1106331 - 1106352 + g 71 -11.5 -2.94137 | opp_overlap 1106320 1106316, overlap 1106330 1106344 1106346 GTCACGCAGATTCTG GCGCGCCTG CTGC CAGCCGCGC ATTTGTGGGCTGCTT TERM 1476 1107256 - 1107245 - G 75 -5.8 -4.57073 | CATGGGCTTTAAAAA TGGC CAGC GCCA GCGATTCCACCAGTT TERM 1477 1108741 - 1108755 + H 82 -11.4 -3.54543 | CGCCGTCAGTTCGAT CAGCGC GTC GCGCTG TTTGACAAAATAACT TERM 1478 1110458 - 1110448 - g 75 -6.8 -4.41348 | CTGTCCGCAAAGAAA TGGG AAT CCCA CCAAGGATGAAATAC SEN1005 1109967 - 1110476 + | hypothetical protein SEN1006 1110476 - 1110946 + | hypothetical protein SEN1007 1111055 - 1111567 + | hypothetical protein SEN1008 1111635 - 1112087 + | hypothetical protein SEN1009 1112150 - 1112599 + | hypothetical protein SEN1010 1112784 - 1113092 + | putative transposase TERM 1479 1114029 - 1114012 - T 82 -6.9 -4.77986 | opp_overlap 1114012, overlap 1114014 CCAAAGACTTAAAAA GCGGAGC GACA GCTCCTC TGGATTTATGTCAGC SEN1013 1114860 - 1114081 - | putative lipoprotein TERM 1480 1114293 - 1114336 + g 100 -9 -5.31275 | gap 1, opp_overlap 1114283 1114293 GATAACGCAACGATA CGCTGTC-GGTCAGTTTTTCA TTT TTAAAATCTGACCAGACGGTG TTTTTTGTCATGGCG TERM 1481 1114625 - 1114641 + g 83 -10.9 -3.92522 | opp_overlap 1114614 1114625 AGAATGACGGCAGAA TTCAGCG GTA CGCTGAA TTTCTCACCTTCCAG TERM 1482 1114641 - 1114625 - G 73 -10.9 -3.35283 | opp_overlap 1114625, overlap 1114614 AGAATGACGGCAGAA TTCAGCG GTA CGCTGAA TTTCTCACCTTCCAG TERM 1483 1115343 - 1115331 - g 91 -3.5 -5.4588 | TAAAACCAGAAAAAA TAAAA TAT TTTTA ATGAAGGGAAAGGAT SEN1013A 1115014 - 1115406 + | hypothetical protein TERM 1484 1115733 - 1115720 - g 70 -5.3 -4.38927 | GTTCGACAGAACAAA GAAAG ATTA CTTTC CTGTCTATCATTTTC SEN1013B 1115403 - 1115780 + | hypothetical protein cspB 1116320 - 1116532 + | cold shock protein TERM 1485 1116618 - 1116593 - T 71 -9.9 -3.21924 | gap 1, opp_overlap 1116598, overlap 1116598 CCATGGTTCACAATA CAG-AACATCGA CAT TCGATGTTACTG AGCAAAACCCGTTTG TERM 1486 1116612 - 1116598 - T 72 -8.6 -3.72788 | opp_overlap 1116598, overlap 1116593 GTTCACAATACAGAA CATCGA CAT TCGATG TTACTGAGCAAAACC TERM 1487 1116741 - 1116755 + T 87 -7.1 -5.24129 | opp_overlap 1116741 AAATAATTCATATTA GCTCC GTACA GGAGC TTTTTTATGCCCGGA TERM 1488 1116973 - 1116949 - T 100 -17.9 -3.78934 | opp_overlap 1116952, overlap 1116952 CTTGCCCTATAATAA CAAGCCCGCGC TAA GCACGGGCTTG AATAACATAAAGCGT TERM 1489 1116970 - 1116952 - T 100 -13.8 -4.02817 | opp_overlap 1116952, overlap 1116949 GCCCTATAATAACAA GCCCGCGC TAA GCACGGGC TTGAATAACATAAAG TERM 1490 1116952 - 1116970 + T 78 -11.6 -3.06796 | opp_overlap 1116949 1116952 GCCCTATAATAACAA GCCCGCGC TAA GCACGGGC TTGAATAACATAAAG ompS 1118186 - 1116990 - | outer membrane protein S1 TERM 1491 1118509 - 1118494 - H 100 -10.4 -6.04378 | opp_overlap 1118494 AAAGCATAAAAAAAA CCGGCA TAAA TGCCGG TAATGTGGGTAATGA TERM 1492 1118494 - 1118509 + H 71 -10.4 -2.65264 | opp_overlap 1118494 AAAGCATAAAAAAAA CCGGCA TAAA TGCCGG TAATGTGGGTAATGA TERM 1493 1119109 - 1119093 - g 75 -5.7 -4.56597 | CCGGCCTCGCAAAAA CAGGGGG TAT CCCGCCG ACACTCAGCCAGAAA SEN1016 1118836 - 1119147 + | hypothetical protein yedJ 1119227 - 1119922 + | hypothetical protein TERM 1494 1120596 - 1120574 - g 76 -3.2 -5.06414 | opp_overlap 1120575, overlap 1120575 1120576 CGTTTCCAAGAAAAA TGCGCTGGGC CGC GCCCACGGCT TTGCCTGCGAGACTC TERM 1495 1121031 - 1121021 - g 71 -4.6 -4.62069 | overlap 1121024 TCGCTACGCGAAAAA GCAC CAG GCGC GGGGAAACGGTTTTG dcm 1119996 - 1121426 + | DNA-cytosine methyltransferase TERM 1496 1121850 - 1121814 - g 76 -12.4 -3.02144 | gap 2, opp_overlap 1121803 1121802 GGAGCGCCTGGAAGA GTGGATCTGCG-GC-GGC GGC GCCAGCGCGCAGATCGAC ACCCAGGGGATTCAT vsr 1121407 - 1121877 + | patch repair protein yedA 1122786 - 1121866 - | hypothetical protein TERM 1497 1122893 - 1122878 - H 72 -3.2 -5.06414 | opp_overlap 1122886 1122886 CTTTTGGAATAAAAA GGCG TTGACCCG CGCC GCCGGTTTCGGCATT yedI 1122962 - 1123873 + | hypothetical protein SEN1022 1123917 - 1124135 + | hypothetical protein TERM 1498 1124141 - 1124160 + F 95 -12.8 -4.34402 | opp_overlap 1124141 AGCCCGATGACAAAA CGCCCGGT TAAT GCCGGGCG TTTTGCTGTGGAGAA TERM 1499 1124160 - 1124141 - f 100 -12.1 -4.4648 | opp_overlap 1124141 AGCCCGATGACAAAA CGCCCGG TTAATG CCGGGCG TTTTGCTGTGGAGAA TERM 1500 1124948 - 1124968 + G 70 -8.9 -3.64703 | opp_overlap 1124939 1124951, overlap 1124951 1124956 AGCCAACGGCGTAAC CCACAGCGC GGC GTGCGGTGG TTTACCTCCGCACAG SEN1023 1124300 - 1126012 + | hypothetical protein yedP 1126806 - 1125991 - | hypothetical protein TERM 1501 1127079 - 1127099 + r 100 -12.5 -5.41746 | overlap 1127091 1127092 CATAAGCAAGTTTGA TCCCGACCC GTA GGGCCGGGA TTTTTTTCGGCCATT yodD 1127343 - 1127116 - | hypothetical protein TERM 1502 1127525 - 1127503 - g 100 -16.2 -4.14392 | GGGTAACCGTTAAAA CGGACGGCGG TCC CCGCCGACCG GGCGTGGTACTGGCA SEN1026 1127472 - 1127666 + | DsrB protein rcsA 1128328 - 1127705 - | colanic acid capsullar biosynthesis activation protein A fliR 1129404 - 1128610 - | flagellar biosynthetic protein FliR fliQ 1129682 - 1129413 - | flagellar biosynthetic protein FliQ fliP 1130429 - 1129692 - | flagellar biosynthetic protein flip precursor TERM 1503 1130023 - 1130041 + g 71 -11 -2.91772 | opp_overlap 1130022 1130023, overlap 1130022 1130010 TGGCGCAACATGAAC GCGCGTAA CGG TTGCGCGC CTTTATCCAGCGCTT TERM 1504 1130304 - 1130294 - G 74 -6.8 -4.26903 | opp_overlap 1130301 GCGAGGTGATGAAAA CCAG CGT CTGG ACGGATAATGACCAG fliO 1130806 - 1130429 - | flagellar protein FliO TERM 1505 1130758 - 1130732 - G 70 -9.5 -3.38727 | gap 1, overlap 1130713 1130733 AATAATGCCAATTAA TGCGCCGCTCAC CTGC ATGAGCGGCG-A TCCGGCTGGCGCGGT fliN 1131219 - 1130806 - | flagellar motor switch protein FliN TERM 1506 1131086 - 1131122 + g 77 -7.2 -4.32034 | gap 1, opp_overlap 1131108, overlap 1131087 GCACCGCTGACATCG CCGCCGCC-AAGCTGTT GGAA AACCGCGTCGGCGGCGC TTTTAGTGGTGGTCG TERM 1507 1131087 - 1131121 + g 71 -10.7 -3.18738 | gap 1, opp_overlap 1131108, overlap 1131086 CACCGCTGACATCGC CGCCGCC-AAGCTGTT GGAA AACCGCGTCGGCGGCG CTTTTAGTGGTGGTC TERM 1508 1131119 - 1131108 - G 74 -7.2 -4.08692 | opp_overlap 1131087 1131086 CAAGCTGTTGGAAAA CCGC GTCG GCGG CGCTTTTAGTGGTGG fliM 1132220 - 1131216 - | flagellar motor switch protein FliM fliL 1132692 - 1132225 - | FliL protein TERM 1509 1132550 - 1132525 - G 80 -4.5 -5.05782 | opp_overlap 1132539, overlap 1132527 ATCCAGCGCAAAAAA TACCGGCGCGG GCGG CGGAGCCGGTT CCGCTTTAGCGTTCG TERM 1510 1132548 - 1132527 - G 70 -7.1 -4.15748 | opp_overlap 1132539, overlap 1132525 CCAGCGCAAAAAATA CCGGCGCGG GCGG CGGAGCCGG TTCCGCTTTAGCGTT TERM 1511 1132655 - 1132666 + g 84 -5.8 -5.1356 | opp_overlap 1132654 AAAGGTATCCAAATC GAGC GTTT GCTC TTTTTGTTAATCGCG fliK 1134014 - 1132797 - | flagellar hook-length control protein TERM 1512 1133384 - 1133425 + g 70 -5 -4.49644 | gap 2, overlap 1133392 GCGTCAGTGATGGCC CCGTGGCG-CGATCGT-CGC TGGC GCGCGCAAGCGACGCCTCGG TTTTCCCTTTTTCAT fliJ 1134454 - 1134011 - | flagellar FliJ protein fliI 1135846 - 1134476 - | flagellum-specific ATP synthase fliH 1136553 - 1135846 - | flagellar assembly protein FliH fliG 1137541 - 1136546 - | flagellar motor switch protein FliG fliF 1139216 - 1137534 - | flagellar basal-body M-ring protein TERM 1513 1137970 - 1137955 - G 72 -2.5 -4.91109 | CGTTTATCAGAAAAA CCCAT CGCTTC ACGGG TTAAATCCTCGATCT TERM 1514 1138156 - 1138186 + g 76 -9 -3.93004 | TGCGTATTGCGCGGG CCAGCACTGTTACT GTT GGTACTGGTGCTGG TTTGTGGCGTATTCT fliE 1139433 - 1139747 + | flagellar hook-basal body complex protein FliE SEN1041A 1140253 - 1139867 - | hypothetical protein TERM 1515 1140263 - 1140250 - G 73 -5.3 -4.55295 | overlap 1140251 CTGTGCATAAATAAA TCATC ACCT GATGA TGTCAGTGAGTAAAA TERM 1516 1140512 - 1140484 - R 70 -9.5 -3.05597 | opp_overlap 1140483, overlap 1140483 GTTATGCCGTAAAAG GTCTCCCGCCGTA ACG TACAGCGGGAGTA TGCGCTTATTTTTGA yedF 1140751 - 1140518 - | hypothetical protein yedE 1142013 - 1140748 - | hypothetical protein TERM 1517 1141570 - 1141546 - G 77 -4.1 -5.0133 | GATCCCGGTAAAAAA GGCGGCCAGGT TAC ACCCCATCGCC AGACGCGCGCCGAAG TERM 1518 1141821 - 1141800 - G 80 -8.7 -4.20883 | opp_overlap 1141804 CAAAAAGCTGCAAAA TTTGCCCGC CCCA GCGGGTAAA TTCGCCCGTCACGGC TERM 1519 1142235 - 1142221 - g 70 -7 -4.08945 | ATGATGTGGTGAAAA CGCCCG CGC CGGCCG GTCTGGAAGGGTACT yedD 1142139 - 1142552 + | putative lipoprotein TERM 1520 1142540 - 1142527 - T 82 -5.9 -5.24129 | opp_overlap 1142494, overlap 1142528 1142529 CCGCGTTAGAAAAAA CGCCG CTGC CGACG CCGCTGCCGTAATTT amyA 1144076 - 1142592 - | cytoplasmic alpha-amylase TERM 1521 1143725 - 1143740 + g 74 -4.7 -4.8048 | CCTGATTCACGCGCT GAACG CGAATA CGTTC TTTTTCGTCTGCGCC TERM 1522 1144075 - 1144124 + g 100 -16.6 -4.25104 | opp_overlap 1144093, overlap 1144076 AACGTGGGGTTTTTC ATCTTCCGTGCTCCAGAAGTCG TTTAGC CGACCTCTGGAGTATGGAAGAA TTTTCATACGAGACG TERM 1523 1144076 - 1144123 + g 100 -20.1 -3.14848 | opp_overlap 1144093, overlap 1144075 ACGTGGGGTTTTTCA TCTTCCGTGCTCCAGAAGTCG TTTAGC CGACCTCTGGAGTATGGAAGA ATTTTCATACGAGAC fliT 1144516 - 1144148 - | flagellar protein FliT fliS 1144923 - 1144516 - | flagellar protein FliS fliD 1146344 - 1144938 - | flagellar hook associated protein (FliD) TERM 1524 1145260 - 1145272 + g 76 -2.7 -5.0925 | AGCGCTTTTTTAAGC TTGGT ATC ATCAA TTTTTAGTTTTCCGG TERM 1525 1147022 - 1147008 - g 71 -10 -3.55622 | TTTAACGGTGTTAAA GTCCTG TCT CAGGAC AACCAGATGAAAATC fljB 1146600 - 1148117 + | flagellin TERM 1526 1148171 - 1148156 - f 79 -10.4 -3.49618 | opp_overlap 1148156 GTGGTACACAATCAA GGCAGC GAAA GCTGCC TTTTTTAATTCCGGA TERM 1527 1148156 - 1148171 + F 100 -10.4 -5.26875 | opp_overlap 1148156 GTGGTACACAATCAA GGCAGC GAAA GCTGCC TTTTTTAATTCCGGA TERM 1528 1149157 - 1149136 - g 73 -5.9 -4.386 | overlap 1149137 TAATTCTCTATAAAA TTTGGGAAA ATAA TTTCCCCAA CCAGCCGAATGTCGA fliB 1148196 - 1149401 + | lysine-N-methylase (ec 2.1.1.-) (lysine N-methyltransferase) TERM 1529 1149409 - 1149432 + F 87 -10.2 -4.04318 | TGACATAGTTTTGTT CGGGGTGGGC TTTT GCGCATCCCG TTTATCCTATCTGGC fliA 1149598 - 1150317 + | RNA polymerase sigma transcription factor for flagellar operon fliZ 1150376 - 1150927 + | regulatory protein (FliZ) fliY 1151074 - 1151874 + | cystine-binding periplasmic protein (FliY) TERM 1530 1151944 - 1151961 + F 89 -5.5 -5.67283 | gap 1, opp_overlap 1151944 ATGTCAGCAAACGGA GGCGCGTG AAT CG-GCGCC TTTTTTATTTCCGTT yedO 1152028 - 1153014 + | D-cysteine desulfhydrase yecS 1153035 - 1153703 + | putative ABC transporter membrane protein yecC 1153700 - 1154452 + | putative ABC-transport ATP-binding protein sdiA 1154685 - 1155407 + | cell-division regulatory protein TERM 1531 1155466 - 1155440 - T 88 -12.2 -3.63805 | opp_overlap 1155440 1155455 ACGCCAGACGCGAAA CCGGCTGAAAGC GAT GCTAACAGCCGG TTTTTTACTACTGGC TERM 1532 1155440 - 1155466 + T 100 -12.2 -5.1861 | opp_overlap 1155440, overlap 1155455 ACGCCAGACGCGAAA CCGGCTGAAAGC GAT GCTAACAGCCGG TTTTTTACTACTGGC yecF 1155698 - 1155474 - | hypothetical protein uvrY 1156162 - 1156818 + | invasion response-regulator TERM 1533 1157683 - 1157670 - g 70 -6.7 -4.09864 | AGCTATTTTCCAAAA GTACC TGGC GGTAC GGAACTGGGCGAAGT TERM 1534 1157863 - 1157853 - g 71 -4.6 -4.53303 | opp_overlap 1157856, overlap 1157854 1157855 CATGTCCAGACAAAA CCGC GCG GCGA TCGCGCCCGTTATCT TERM 1535 1158234 - 1158222 - g 70 -6.9 -4.09864 | ATCGACGGCGGAAAA GGGCA GCT CGCCC AGGCGAAAGCCGTTT uvrC 1156815 - 1158647 + | excinuclease ABC subunit C TERM 1536 1158804 - 1158815 + G 71 -4.4 -4.67943 | overlap 1158792 1158790 CCTGGGCGCCGATGG TCAG CGCG CTGA TTTTCTGTATTGCCG pgsA 1158704 - 1159252 + | phosphotidylglycerophosphate synthetase TERM 1537 1159446 - 1159430 - f 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 1538 1159533 - 1159519 - f 76 -8.6 -4.07885 | GATGCTGGCTGAAAA GCCAAA AAA TTTGGC GCGTTAACAAAGCGG TERM 1539 1159661 - 1159641 - f 72 -10.5 -2.89742 | overlap 1159644 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCGTTCGCGCTGTGC TERM 1540 1159747 - 1159760 + F 100 -8.1 -5.66684 | opp_overlap 1159747 AGCAGTGTCGTGAAA CCACC TACG GGTGG TTTTTTTGTGCCTTC TERM 1541 1159843 - 1159830 - f 73 -2.3 -5.25893 | ATACACAGTAAAAAA CACCG GTAG CGGCA TTTCTGCCAGTACAA TERM 1542 1160784 - 1160794 + G 76 -3.2 -5.0916 | AGTGAAGCGCACTCG CCGT GGA ATGG TTTTTATATTACCGC TERM 1543 1161666 - 1161653 - g 72 -2.3 -4.87665 | opp_overlap 1161653 TCTTAGTCATAAAAA TCCCC AAAT GCGGA TCGATTATCTCACCA SEN1065 1160496 - 1161935 + | hypothetical protein SEN1066 1162148 - 1162474 + | hypothetical protein TERM 1544 1162495 - 1162514 + F 75 -6.4 -4.52589 | opp_overlap 1162495 1162493 1162491 CATGAGTATAATATA GCGAGAAA CCCA TCTCTCGC TTTTGTGTGGGGCGA yecA 1162713 - 1163378 + | hypothetical protein TERM 1545 1163405 - 1163441 + T 100 -20.3 -3.66874 | CGGCCATAGCGTGAC GATTATCGAGCCTGGAC GGC GTCCAGGCCCGGTAATC TTTGCCTGGCATTAA tyrP 1164664 - 1163453 - | tyrosine-specific transport protein TERM 1546 1163544 - 1163525 - G 85 -11.4 -4.03978 | AATGCCGCAGATAAA CACCAGCG CCAG CGCTGGCG TGCCGCCTGCCACAC TERM 1547 1163703 - 1163693 - G 71 -8.2 -3.786 | overlap 1163694 GTAGAAAAGTGCAAA CGCC AGC GGCG GCAGAAAGGTAATCA TERM 1548 1164996 - 1164981 - g 75 -6 -4.63932 | GAGGCGGCAATAAAA GCGCGC TTTG GCGAGC GGGCACGATTTCACA yecH 1164891 - 1165130 + | hypothetical protein ftn 1165673 - 1165176 - | ferritin TERM 1549 1165855 - 1165836 - R 100 -10 -5.3167 | TAAAAATAAAGAAAA GCCAGCAC CTTC ATGCTGGC AATAGCGACCCTGCA TERM 1550 1165928 - 1165907 - R 73 -10.9 -2.52464 | opp_overlap 1165889 1165906 1165905 1165904 GTCGGCGTTAAGCCA GCCGCCTTA ATAA TAAAGCGGC ATGATTTGCGGGACG SEN1071 1166248 - 1165913 - | putative lipoprotein TERM 1551 1166394 - 1166418 + H 93 -11.7 -3.76607 | opp_overlap 1166399, overlap 1166388 GTGAGCGTCTTTTCA TTTAATGAAAC TTC GTTTCATTAAA TTTGAATGTGTGTTC SEN1072 1166504 - 1167142 + | Putative sugar phosphate isomerase ftnB 1167824 - 1167321 - | ferritin-like protein TERM 1552 1168547 - 1168560 + G 72 -3.7 -4.7373 | opp_overlap 1168548, overlap 1168548 CAGCACGCTGAGTGA ACGCC AGCA GGCGC TTTTTGATGCGGTAG araH 1168374 - 1168931 + | hypothetical protein TERM 1553 1169437 - 1169471 + F 100 -14.4 -3.91897 | gap 1, overlap 1169438 1169439 ACAGTATAGCTTCAC G-TCATCGCCAGCCG CTACCC CGGCTGGCGATGGTC TTTCTAAATGGCGAG TERM 1554 1169438 - 1169469 + F 100 -18.1 -3.5511 | overlap 1169437 1169439 CAGTATAGCTTCACG TCATCGCCAGCCG CTACCC CGGCTGGCGATGG TCTTTCTAAATGGCG TERM 1555 1169439 - 1169468 + F 100 -19.4 -2.72745 | overlap 1169438 1169437 AGTATAGCTTCACGT CATCGCCAGCCG CTACCC CGGCTGGCGATG GTCTTTCTAAATGGC TERM 1556 1170130 - 1170144 + GF 82 -7.1 -4.82901 | AGGAGGCGCCCTTTG CGGGA CGGAT TCCCG TTTTTGTGGGCGACG otsB 1169565 - 1170368 + | trehalose phosphatase TERM 1557 1170414 - 1170394 - g 81 -8.1 -4.30719 | opp_overlap 1170399 1170401 1170401, overlap 1170396 CCCCCGGATAATAAA GGCGGCGCC GGC GGCCTCGCC GTTGGCGTGCTTGGC TERM 1558 1170399 - 1170421 + G 83 -14.8 -2.71364 | opp_overlap 1170394 1170396, overlap 1170401 1170401 GGATAATAAAGGCGG CGCCGGCGGC CTC GCCGTTGGCG TGCTTGGCGCGCTAA TERM 1559 1171663 - 1171676 + G 72 -3.8 -4.71828 | opp_overlap 1171663 AAAAATGACATTAAC CGCT GGCAGG AGCG TTTTATTCATGACCT otsA 1170343 - 1171764 + | trehalose-6-phosphate synthase yecG 1172210 - 1171782 - | hypothetical protein TERM 1560 1172713 - 1172732 + H 79 -8 -4.4009 | opp_overlap 1172715 AGTATTCCGGTAGAT TATGTGAT CTAC ATCACATA TTTTCTAAAATCGCC flhD 1172997 - 1173347 + | flagellar transcriptional activator FlhD flhC 1173350 - 1173928 + | flagellar transcriptional activator TERM 1561 1173955 - 1173978 + F 100 -15.4 -5.86332 | opp_overlap 1173951 1173950 TGGACAAACACTCCA GCAGCGGTAA GTCA TTACCGCTGC TTTTTTTTGCCTTGC motA 1174110 - 1174940 + | motility protein A TERM 1562 1175000 - 1174973 - g 70 -6.9 -4.07687 | gap 1, overlap 1174988 1174989 ATTGTCGTCGTAAAA CGCCGCAG-GCA CAAAC CGCACGGCGGCG GGGCGCACGGTTCCT TERM 1563 1174998 - 1174988 - g 71 -8.2 -3.91897 | overlap 1174973 1174989 CGCCGCAGGCACAAA CCGC ACG GCGG CGGGGCGCACGGTTC TERM 1564 1175439 - 1175427 - g 70 -6.9 -4.11216 | overlap 1175428 GCCCGATGTTTAAAA CCGGC AGC GCCGA AGTTGAGCCGTATAT motB 1174937 - 1175866 + | motility protein B TERM 1565 1176612 - 1176598 - g 70 -3.4 -4.6821 | opp_overlap 1176607, overlap 1176602 AAGCGCAAGAGAAAA CCGAGG TAG CGCCGG TAGCGCCTCCGGCAG TERM 1566 1177106 - 1177095 - g 83 -7.2 -4.60924 | GAAATGCCGGAAAAA CGCC TTGA GGCG GGGAAAAATGTTGTC cheA 1175871 - 1177886 + | chemotaxis protein CheA TERM 1567 1178364 - 1178354 - g 70 -3.2 -4.74706 | GTGAATATCGAAAAA CTGC TTA ACAG CGAAGAGATGGCGCT cheW 1177907 - 1178410 + | purine binding chemotaxis protein TERM 1568 1178446 - 1178414 - f 100 -18.5 -3.61715 | opp_overlap 1178406 1178416, overlap 1178415 CACGTCGCGTAATAA CGTTGCCGGATGGCG TCG CGCCATCCGGCAATA TTCACCGTTATGCTT TERM 1569 1178445 - 1178415 - f 100 -19.8 -2.76815 | opp_overlap 1178406 1178416, overlap 1178414 ACGTCGCGTAATAAC GTTGCCGGATGGCG TCG CGCCATCCGGCAAT ATTCACCGTTATGCT TERM 1570 1178416 - 1178444 + F 100 -23.3 -3.07233 | opp_overlap 1178415 1178414, overlap 1178406 CGTCGCGTAATAACG TTGCCGGATGGCG TCG CGCCATCCGGCAA TATTCACCGTTATGC TERM 1571 1179740 - 1179722 - g 95 -5.2 -5.42862 | opp_overlap 1179723, overlap 1179723 ACAGTTCGAAAAAAA TCGCTGAC ATT ATCAGCGT TATCGACGGTATTGC TERM 1572 1179739 - 1179723 - g 73 -8.7 -3.84633 | opp_overlap 1179723, overlap 1179722 CAGTTCGAAAAAAAT CGCTGAC ATT ATCAGCG TTATCGACGGTATTG cheM 1178647 - 1180308 + | methyl-accepting chemotaxis protein II TERM 1573 1180527 - 1180513 - g 71 -11.4 -2.88999 | opp_overlap 1180514 1180515, overlap 1180515 TTGTTACAGATGACA CAGCGC CTC GCGCTG TCCGACGCGCATTTT TERM 1574 1181009 - 1180985 - g 74 -7.1 -4.28774 | opp_overlap 1180985 TCAGCGAACTGAAAA CGTTATCGCCG CAG CAGCTACAACG TTACTTCATGCGCGG cheR 1180462 - 1181328 + | chemotaxis protein methyltransferase cheB 1181325 - 1182374 + | Chemotaxis response regulator protein-glutamate methylesterase cheY 1182392 - 1182781 + | chemotaxis protein CheY cheZ 1182792 - 1183436 + | chemotaxis protein CheZ TERM 1575 1183489 - 1183520 + F 82 -13.1 -3.10493 | overlap 1183471 1183469 GAATCCGTCAACCCG GCCGGATACGAGA CTTTCT TATCGTATCCGGC TATCTCTATTAACGC TERM 1576 1184027 - 1184016 - g 71 -7.2 -4.06055 | ATTTTCTAAATTAAA CCCG CTGC CGGG AATTAAGCGCATGTT TERM 1577 1184730 - 1184750 + G 74 -6.8 -4.36914 | opp_overlap 1184728 ACAACCTGAGAACCT TCCGGTGC CAGAA GCGCTGGA TTTTATGAACGAGAA flhB 1183630 - 1184781 + | flagellar biosynthetic protein FlhB TERM 1578 1185785 - 1185773 - g 80 -4.7 -5.06414 | overlap 1185775 GGGCGCGAAGAAAAA GCGCC GGA GGAGC CGCAGCCGGTAAAAA flhA 1184774 - 1186852 + | flagellar biosynthesis protein FlhA flhE 1186852 - 1187244 + | flagellar protein FlhE precursor SEN1092 1187481 - 1188620 + | hypothetical protein SEN1093 1190545 - 1188674 - | penicillin-binding protein TERM 1579 1188751 - 1188776 + g 86 -10.3 -4.09685 | TTCGCATGATGGGCG CGGCGGTAACG CCGT CGCTTCCGCCG TTTTCCAGAATCAAG TERM 1580 1189231 - 1189213 - G 71 -7.5 -4.04206 | opp_overlap 1189212 1189221 1189222 CGATGCCGACAGAAA TGGTATC GCCCT GATACCA GGCTTTTTTATGGAC TERM 1581 1189221 - 1189234 + g 78 -2.3 -5.24129 | opp_overlap 1189213, overlap 1189212 1189222 ACAGAAATGGTATCG CCCTG ATAC CAGGC TTTTTTATGGACCCG TERM 1582 1189403 - 1189388 - G 74 -3.2 -4.9792 | GACCTGATAGAAAAA GGTATC CGCA GATTCC TCAATCGCTTTAGTG TERM 1583 1190710 - 1190682 - R 100 -14.6 -5.06414 | opp_overlap 1190679 1190676 CTGTGGCAATAAAAA GGCCTGAGTCCG TTATC CGGAGTCAGGCC TGATGATGTTAACGA argS 1192467 - 1190734 - | Arginyl-tRNA synthetase yecM 1192704 - 1193273 + | hypothetical protein TERM 1584 1193469 - 1193483 + G 86 -7.8 -4.7373 | ACATCCGATTATTCG TCCTCG CGG CGGGGA TTTTTACTACACTGA TERM 1585 1193756 - 1193746 - g 90 -8.2 -4.83169 | ACTTCCGGACAAAAA GCCG ATG CGGC GCAAGGTTTATCAAT cutC 1193293 - 1194039 + | putative copper homeostasis protein TERM 1586 1194087 - 1194111 + T 100 -10 -5.71983 | TGCTTGCTCGTACCA GGCCCCTG CCAATTCAA CAGGGGCC TTTTTTTCTCCTTCA TERM 1587 1194162 - 1194195 + T 86 -10.9 -3.794 | overlap 1194163 TTGGCCGCCTCGCGC ACCCCGGTCACGTAG CTAC CTACGTTCCCGGGGA TTTGCTGCGTTGCCG TERM 1588 1194163 - 1194194 + T 87 -14.4 -2.87319 | overlap 1194162 TGGCCGCCTCGCGCA CCCCGGTCACGTAG CTAC CTACGTTCCCGGGG ATTTGCTGCGTTGCC yecP 1195246 - 1194275 - | hypothetical protein yecO 1195986 - 1195243 - | hypothetical protein TERM 1589 1196028 - 1196012 - R 71 -3.6 -4.85782 | overlap 1196013 TCCGGGAAAAATAAA GGCGCA TATTG TGCGCT AATACAGGGAGAAAA yecN 1196422 - 1196027 - | hypothetical protein TERM 1590 1196339 - 1196316 - G 88 -11 -4.11484 | gap 1, opp_overlap 1196313 TGTAATTCGCTAAAA CCGCCGTCGCC ATA GGCGACA-CGG TACTGCATTCGCAAG yecE 1197293 - 1196475 - | hypothetical protein TERM 1591 1196631 - 1196608 - G 74 -2.2 -4.98672 | opp_overlap 1196619, overlap 1196609 TGTAAAAACAGAAAA GGCGTGGTGG TCTG CCGCCACTGC GGGAGTTTCTGCAAC TERM 1592 1197130 - 1197118 - G 80 -4.8 -5.01042 | opp_overlap 1197118 AATTTAAAGCAAAAA CGGA AATCG TCCG TAGTTTGCGCATACC yecD 1197856 - 1197290 - | putative hydrolase aspS 1198181 - 1199953 + | Aspartyl-tRNA synthetase ntpA 1200056 - 1200508 + | DATP pyrophosphohydrolase TERM 1593 1200498 - 1200518 + F 79 -3.2 -5.40474 | gap 1, opp_overlap 1200499, overlap 1200499 AAGAGTTTGTCATTA ACGTCGCCT GAAA AGGCG-CGC TTTTTTTGAGGAAAT yebC 1200538 - 1201278 + | hypothetical protein ruvC 1201315 - 1201836 + | crossover junction endodeoxyribonuclease yebB 1202437 - 1201838 - | hypothetical protein SEN1107 1202646 - 1203338 + | hypothetical protein TERM 1594 1203629 - 1203644 + F 79 -7.6 -4.47611 | ATACGTGTTTTTCAT CTGGAT AAAC ATCCAG TCTTTTTTTATGATA TERM 1595 1204283 - 1204303 + G 88 -13.9 -3.32844 | opp_overlap 1204277 1204275 AGTGAAACACTGATT CGCGACGCG TTA CGCGCCGCG TTATGAGGTAAAGGA ruvA 1203698 - 1204309 + | Holliday junction DNA helicase ruvB 1204399 - 1205328 + | Holliday junction DNA helicase zunB 1206192 - 1205407 - | high-affinity zinc uptake system membrane protein TERM 1596 1205926 - 1205914 - G 80 -10.5 -3.82202 | CAGTCCTAAAGATAA GGCGC TGT GCGCC ATAATGCCCAGTAAG znuC 1206944 - 1206189 - | high-affinity zinc uptake system ATP-binding protein TERM 1597 1207440 - 1207425 - g 76 -5.4 -4.77036 | GCCGATGAGGAAAAA GGTGAC GTAC ATCACC ATCACGGCGAATATA znuA 1206966 - 1207967 + | high-affinity zinc uptake system periplasmic binding protein yebA 1207983 - 1209302 + | hypothetical protein TERM 1598 1209319 - 1209341 + F 100 -13.4 -5.8901 | opp_overlap 1209308 1209319 AAATGCGCTGACAGA GCCGGTACGC GAT GTGTGCCGGC TTTTTTGTTTTGTGT TERM 1599 1209766 - 1209750 - g 86 -3.7 -5.40072 | overlap 1209751 GCGGTCCGAAAAAAA TTCAACA GCG TGTTGAC TGGGAAGGTCTGGAA msbB 1209419 - 1210390 + | lipid A acyltransferase TERM 1600 1210417 - 1210392 - T 100 -14.9 -4.49958 | opp_overlap 1210396, overlap 1210396 ATCCCATCAAATAAA TAAAGCCTCTC GTAA GAGAGGCTTTA TGCTGACAAACCCTG TERM 1601 1210396 - 1210413 + T 87 -11.3 -3.96148 | opp_overlap 1210396 1210392 CATCAAATAAATAAA GCCTCTC GTAA GAGAGGC TTTATGCTGACAAAC TERM 1602 1210413 - 1210396 - T 100 -11.3 -4.80736 | opp_overlap 1210396, overlap 1210392 CATCAAATAAATAAA GCCTCTC GTAA GAGAGGC TTTATGCTGACAAAC pykA 1211905 - 1210463 - | pyruvate kinase A TERM 1603 1211815 - 1211849 + g 71 -12.2 -2.52543 | opp_overlap 1211827, overlap 1211807 1211824 1211827 GTACTACGTTTGCGC CCGCGGCGATAACCTT CTC AAGGTTGTTATCGCGG TCAGTTGCCGGGCCT yebK 1212898 - 1212029 - | putative hex-regulon repressor zwf 1213240 - 1214715 + | glucose 6-phosphate dehydrogenase TERM 1604 1214795 - 1214820 + F 89 -5.4 -5.80364 | gap 1 TTTTTGCACTTTTAA GCCTCGTGTGG ATTCA CC-TGCGAGGC TTTTTTTATTACACT edd 1214950 - 1216761 + | 6-phosphogluconate dehydratase eda 1216799 - 1217440 + | KHG/KDPG aldolase TERM 1605 1217546 - 1217509 - T 80 -6.4 -4.83615 | gap 2, opp_overlap 1217511 1217512, overlap 1217510 1217511 CAGGTCTGATAAAAA TGCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-CT TTTACCGTCACGCGG TERM 1606 1217545 - 1217510 - T 75 -9.9 -3.49687 | gap 2, opp_overlap 1217511 1217512, overlap 1217509 1217511 AGGTCTGATAAAAAT GCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-C TTTTACCGTCACGCG TERM 1607 1217511 - 1217545 + T 73 -7.9 -4.13767 | gap 1, opp_overlap 1217510 1217509 1217511, overlap 1217512 GGTCTGATAAAAATG CGCTAACGTCGCCATC AGGC GATGGCG-CATTAGCC TTTTACCGTCACGCG TERM 1608 1217512 - 1217544 + T 75 -11.4 -3.08046 | gap 1, opp_overlap 1217510 1217511 1217509, overlap 1217511 GTCTGATAAAAATGC GCTAACGTCGCCATC AGGC GATGGCG-CATTAGC CTTTTACCGTCACGC TERM 1609 1217560 - 1217570 + T 73 -4.6 -4.76312 | overlap 1217551 CTTTTACCGTCACGC GGCT GGC GGCC TTTTTCGCTCTTATC purT 1218718 - 1217540 - | phosphoribosylglycinamide formyltransferase 2 TERM 1610 1217645 - 1217631 - G 74 -11.4 -3.20345 | overlap 1217629 AACGCTACACCAAGA CGACGG CTG CCGTCG ATCTCAGGCTTACCA yebG 1218849 - 1219139 + | hypothetical protein TERM 1611 1219414 - 1219398 - g 91 -3.6 -5.55664 | CGACGACCAAAAAAA GGTCGG GCAGG CTGACC CGGTCGCGTGGGTTA yebF 1219207 - 1219560 + | hypothetical protein yebE 1219654 - 1220313 + | hypothetical protein ptrB 1220526 - 1222577 + | oligopeptidase TERM 1612 1222587 - 1222613 + T 74 -8.7 -3.89291 | gap 1, opp_overlap 1222579, overlap 1222588 GCATAGACGCGCGCG CCCGCAACGGCT TGTG AGC-GTCGCGGG TTATTGTGGTGTTCC exoX 1223312 - 1222614 - | exodeoxyribonuclease X SEN1126 1223992 - 1223336 - | hypothetical protein holE 1224330 - 1224100 - | DNA polymerase III, theta subunit yobA 1224462 - 1224842 + | putative cation resistance protein SEN1129 1224843 - 1225718 + | putative cation transporter SEN1130 1225735 - 1226088 + | hypothetical protein TERM 1613 1226134 - 1226107 - T 100 -11.4 -5.45652 | opp_overlap 1226107 ATTTTTAATAAAAAA CCGTAAACCTTC ACGA AAAGGCTTACGG TTTTTTTATCTCTGA TERM 1614 1226107 - 1226134 + T 100 -8.5 -5.76633 | opp_overlap 1226107 ATTTTTAATAAAAAA CCGTAAACCTT CACGAA AAGGCTTACGG TTTTTTTATCTCTGA TERM 1615 1226297 - 1226326 + T 93 -7.3 -5.74684 | gap 1, overlap 1226298 AAGAGCCATTTCCCT G-GACCGAATAC AGGAATC GTATTCGGTCTC TTTTTATTTTTCTTA TERM 1616 1226298 - 1226324 + T 95 -11 -4.45545 | overlap 1226297 AGAGCCATTTCCCTG GACCGAATAC AGGAATC GTATTCGGTC TCTTTTTATTTTTCT SEN1131 1227550 - 1226471 - | putative integrase TERM 1617 1226557 - 1226576 + gT 72 -3.5 -4.82901 | CCAGGAGTTTTTGGG CGAACAC CTCGCC GTGCTCG TTTTTGTACAGCCGC TERM 1618 1227044 - 1227062 + gT 71 -4.4 -4.61231 | overlap 1227037 1227036 CTTAATCTCTGGTAT CCGGGTTG CTT CCACCGGG TTTTTCACAATATGC SEN1132 1227803 - 1227525 - | putative excisionase TERM 1619 1229772 - 1229796 + G 75 -12.1 -2.90723 | GTAACTTCTACCTGA CCGGTGCGCAG GAG CTGCGTAACGG TGTGGTTAAAGGTCC SEN1133 1228217 - 1230196 + | putative phage encoded hydrolase TERM 1620 1230201 - 1230230 + F 77 -10.7 -3.34192 | opp_overlap 1230198 1230202, overlap 1230202 TTACACCATAAATAG ATTCCCTGCGGCG TCAA TGCTGCAGGGAAG TTACTTCAGACAATT TERM 1621 1230229 - 1230202 - f 79 -11.3 -3.37299 | opp_overlap 1230201 1230202, overlap 1230198 TACACCATAAATAGA TTCCCTGCGGC GTCAAT GCTGCAGGGAA GTTACTTCAGACAAT TERM 1622 1230202 - 1230229 + F 83 -14.2 -2.60194 | opp_overlap 1230202 1230198, overlap 1230201 TACACCATAAATAGA TTCCCTGCGGCG TCAA TGCTGCAGGGAA GTTACTTCAGACAAT SEN1134 1230217 - 1230453 + | putative phage membrane protein TERM 1623 1230442 - 1230485 + F 75 -11.2 -3.08508 | gap 1, overlap 1230444 ATGCTTTTCGATGCC GGTTGGCCATGATGCCAGT ATGGTTA ACTGGCATCATGG-CAGCA TAATTTTGCCGGATA SEN1135 1230491 - 1230613 + | phage encoded Hok-like membrane protein TERM 1624 1230704 - 1230715 + F 85 -3.6 -5.58454 | ACCCGCACTTAATAC CTGC GCCG GCGG TTTTTTTAATGTCCG SEN1136 1230831 - 1231133 + | hypothetical protein TERM 1625 1231178 - 1231204 + F 72 -9.4 -3.58343 | opp_overlap 1231177 GAACTCCCAATCTAC TGCGCCAACG GAGAGAA CGATGGCGCA TTTACAACTGGTCAA TERM 1626 1231309 - 1231288 - g 74 -4.3 -4.72272 | opp_overlap 1231288 TGCGCTCAGTAAAAA TCGGTGAGT GGAT ACACGCCGA TTTTAAACGTGTCCG TERM 1627 1231288 - 1231309 + G 70 -6.5 -4.13014 | opp_overlap 1231288 TGCGCTCAGTAAAAA TCGGTGAGT GGAT ACACGCCGA TTTTAAACGTGTCCG SEN1137 1231197 - 1231796 + | hypothetical protein TERM 1628 1232419 - 1232429 + G 83 -8.2 -4.42386 | CTCCACTTCCTCATG GCGC CGT GCGC TTTTGTCACTCGAAG SEN1139 1232150 - 1232839 + | phage antitermination protein Q SEN1140 1232930 - 1233460 + | hypothetical protein TERM 1629 1233564 - 1233578 + T 89 -4.9 -5.7946 | CTTATTTACATCTTC CTGGC TTTTC GCCGG TTTTTTTATTCAGCC SEN1142 1234283 - 1233834 - | putative phage lipoprotein TERM 1630 1234419 - 1234451 + r 100 -22.3 -3.94634 | opp_overlap 1234419 1234423, overlap 1234423 TGTGTTCTTTATGAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTATTTCCCCTCATA TERM 1631 1234451 - 1234419 - R 100 -22.3 -3.14132 | opp_overlap 1234419 1234423, overlap 1234423 TGTGTTCTTTATGAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTATTTCCCCTCATA TERM 1632 1234447 - 1234423 - R 100 -18.7 -4.24342 | opp_overlap 1234419 1234423, overlap 1234419 TTCTTTATGAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCCCT TERM 1633 1234423 - 1234447 + r 100 -18.7 -4.57581 | opp_overlap 1234423 1234419, overlap 1234419 TTCTTTATGAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCCCT SEN1143 1235330 - 1234644 - | putative bacteriophage encoded virulence protein SEN1144 1235591 - 1235935 + | putative bacteriophage holin SEN1145 1235919 - 1236371 + | putative phage lysozyme SEN1146 1236389 - 1236868 + | putative phage lysozyme TERM 1634 1237699 - 1237716 + T 100 -8.4 -5.28176 | opp_overlap 1237698 CGATACAGATTTAAT GCCCTC CAGTGA GAGGGC TTTTTTATGGGTAAA sodC 1238296 - 1237763 - | phage encoded superoxide dismutase [cu-zn] 1 precursor (ec 1.15.1.1) (sodCI) TERM 1635 1238441 - 1238428 - g 71 -8.1 -3.82218 | opp_overlap 1238420 1238437 AGCGAGACCACCAAA GCGGA GCAG TCCGC GAAGGTGGATTTGTG TERM 1636 1239010 - 1238998 - g 77 -7.7 -4.2687 | CCGAAAAAGGATAAA TGCAG CCA CTGCA TGAAAGGCTGTGAAA TERM 1637 1239036 - 1239051 + G 70 -3.2 -4.75174 | overlap 1239027 TGAAATGCGTAACAA TCTGGT GAAT GCCGGA TTTTTCGCTTCCATC SEN1150 1238386 - 1239081 + | phage minor tail protein TERM 1638 1241021 - 1241009 - T 71 -7.7 -3.90048 | CGTTCCGGAAAAAGA GTCCA TCG TGGAC AACGGGGCGCACTTT TERM 1639 1242328 - 1242314 - T 79 -8.6 -4.26589 | ATCAGATAGGGAAAA CCATCA CGG TGATGG CTAACTGTGAGCGTA TERM 1640 1242776 - 1242765 - T 74 -5.8 -4.67942 | CGGAAGAAACCAAAA GCAG GCTC CTGC AAATGGCATCTGAAA TERM 1641 1242954 - 1242998 + T 100 -13.9 -4.35742 | opp_overlap 1242963 AAAAATATAGCTATG TAGTAGAGATTGCTGCTATAT GTT ATATAGCAGCAATGGCTATTA TTTTGATGGTTGAGT TERM 1642 1242989 - 1242963 - T 93 -15.4 -2.95298 | opp_overlap 1242954 GCTATGTAGTAGAGA TTGCTGCTATAT GTT ATATAGCAGCAA TGGCTATTATTTTGA SEN1155 1243858 - 1243136 - | type III secretion system, secreted effector protein (SopE) SEN1157 1245138 - 1244338 - | hypothetical protein TERM 1643 1244757 - 1244781 + g 70 -3 -4.68384 | gap 1, opp_overlap 1244762, overlap 1244763 CTAAAATTAGCGACA TATCAGCACAG TTCC CTGTGTT-ATA TTTTATTGAATCAAT TERM 1644 1244763 - 1244776 + g 70 -6.7 -4.0865 | opp_overlap 1244762, overlap 1244757 TTAGCGACATATCAG CACAG TTCC CTGTG TTATATTTTATTGAA TERM 1645 1245370 - 1245346 - H 87 -10.7 -4.15565 | GTTAGGATGTGAAAA CACAGGGACAG TTA CTGTCACTGCG AAGGCAGCAATAAGG TERM 1646 1246293 - 1246326 + H 76 -5.1 -4.81083 | overlap 1246295 TACAAATTTCTTTGT CAGCCCATCCGGG TGAATATT CCCGGTCGGGCTA TTTTTCCTGATTCCG TERM 1647 1246295 - 1246324 + H 73 -7.7 -4.02049 | overlap 1246293 CAAATTTCTTTGTCA GCCCATCCGGG TGAATATT CCCGGTCGGGC TATTTTTCCTGATTC TERM 1648 1246589 - 1246575 - H 70 -10 -3.07629 | opp_overlap 1246587 AGAGGAAACCACACA GGCAGA TAT TCTGCC GCCGTCCGCGTGGCG TERM 1649 1247184 - 1247208 + H 73 -4.1 -4.77036 | overlap 1247191 CCGCGTTTCTGGTGA CAGCCTCCGGC TCT GCTGCTGGTTG TTTTTCCTCCTGCAC TERM 1650 1247810 - 1247836 + H 71 -3.6 -4.87665 | opp_overlap 1247791, overlap 1247825 AGCTTGAGCTAGAAC GTCATGCCGC CCGATCC GCAGCGTGGC TTTTTGTGACTAAAG SEN1162 1247964 - 1248497 + | exported phage protein TERM 1651 1248511 - 1248482 - T 71 -7.9 -3.99985 | opp_overlap 1248482 GAGAGAGTCAAATAA TTACAGGAGGCAT TGAA ACTCCCCCTGTAA TATTGCTGTAAAAAA SEN1163 1248921 - 1248754 - | putative phage membrane protein SEN1164 1249229 - 1249720 + | putative phage terminase; small subunit TERM 1652 1251172 - 1251157 - T 74 -8.2 -3.89938 | opp_overlap 1251156, overlap 1251151 ACAATCAAAGGTAAA CCCGCC AGTG GGCGAG CTGTACTTTCTCAGG TERM 1653 1252117 - 1252101 - T 86 -13.7 -3.29096 | TGGATGAATGATGAA GCTGCGG AGG CCGCAGC CAGACTTCGTGAAGC TERM 1654 1252341 - 1252375 + T 75 -10.9 -2.95476 | overlap 1252343 TTTGTCAGGAAAGCT CAGGCCTTATTTATA GCAAA TATGAAGAAGGCCTG TCTGTCATAACTGAT pagK 1252622 - 1252422 - | phage encoded pagK (phoPQ-activated protein) TERM 1655 1253782 - 1253816 + r 93 -11.7 -3.67976 | gap 1, opp_overlap 1253786 TTAAACTATCGTAAT GGAACAAAGAGTTACT TTAA AG-AGCTCTTTGTTCC TTTAACCTTGATGAA TERM 1656 1254476 - 1254486 + r 71 -6.8 -4.07568 | opp_overlap 1254466, overlap 1254468 GAGAACTGCCCTCGT CAGG AGG CCTG TTTTCAGAAAGGCAA SEN1172 1255072 - 1254452 - | hypothetical protein TERM 1657 1254907 - 1254896 - G 86 -3.6 -5.28942 | GAGGTTAAATAAAAA GCCA AAAC CGGC GATGATGAGGCCAGC SEN1173 1255234 - 1255076 - | putative inner membrane protein pagO 1256281 - 1255367 - | inner membrane protein (PagO) TERM 1658 1257021 - 1257078 + r 73 -11.5 -2.59051 | gap 1, opp_overlap 1256992, overlap 1257021 TATGCAAGAACGGGC TGCGGCAAGCTGGCGATCGTTCGATAGT GCG AGTATTGAATGGTTGCCAG-TTGCGGCG GATTTTACTTGTTCA SEN1174A 1257943 - 1257584 - | hypothetical protein TERM 1659 1258240 - 1258222 - g 74 -3 -4.91109 | CGGGTATGAGAAAAA TGCGCCCA AAA CAGGCTCA AACACCCGCAATGGC TERM 1660 1258535 - 1258525 - g 81 -8.2 -4.24204 | CACTGAGAGGCAAAA CCGG CAA CCGG ATGCGCTGTACCCCA SEN1176 1258067 - 1259227 + | transposase TERM 1661 1259248 - 1259269 + T 79 -10.1 -3.76224 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATAACTGGGCA SEN1177 1259560 - 1259420 - | hypothetical protein SEN1178 1259995 - 1259726 - | hypothetical protein SEN1179 1260368 - 1260787 + | putative acetyltransferase SEN1180 1261636 - 1261160 - | hypothetical protein TERM 1662 1261638 - 1261649 + r 79 -4.4 -5.15969 | TCATCCTTGCTCATA CATC TCCA GATG TTTTTTCGATTACGC TERM 1663 1261795 - 1261811 + r 74 -10.9 -2.80074 | opp_overlap 1261793, overlap 1261791 GCTTTGAATATCATT TCTCCTG CAC CAGGAGA TGCTGTTGTCGAGAA SEN1181 1262361 - 1261966 - | hypothetical protein TERM 1664 1262012 - 1262030 + g 86 -3.8 -5.41359 | opp_overlap 1262003, overlap 1262003 1262002 1262013 AATAATTGGTTGTCT TTCGACCA GTA TTGTCGAG TTTTTTGGTTTAATT TERM 1665 1262521 - 1262531 + H 76 -2.4 -5.41143 | TGTTACTGATTATTT CTCG TAG CGCG TTTTTTTGACCACTA TERM 1666 1263536 - 1263521 - g 84 -3.2 -5.36441 | TGGGGAGATAAAAAA TGGCGT ATTT ACTCCA GGTGGGGCAGGGGCG sopE2 1263045 - 1263767 + | invasion-associated secreted effector protein (sopE2) TERM 1667 1263840 - 1263871 + F 80 -6.6 -4.75288 | overlap 1263842 CTATATATTCGTTTT TATGGCGACGCTTT TAAC AAAACGTCGTCATC TTTATTTTAATATAA TERM 1668 1263842 - 1263869 + F 77 -9.2 -3.98052 | overlap 1263840 ATATATTCGTTTTTA TGGCGACGCTTT TAAC AAAACGTCGTCA TCTTTATTTTAATAT SEN1183 1264052 - 1264216 + | hypothetical protein TERM 1669 1264252 - 1264301 + F 100 -19.4 -4.66318 | opp_overlap 1264242, overlap 1264254 1264257 GAACAGGCGATAGTG AGTAGCTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAGTTATA TTTTATTGCGATGAT TERM 1670 1264254 - 1264299 + F 100 -24.2 -3.94438 | opp_overlap 1264242, overlap 1264252 1264257 ACAGGCGATAGTGAG TAGCTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAGTTA TATTTTATTGCGATG TERM 1671 1264257 - 1264296 + F 100 -23.7 -4.0865 | opp_overlap 1264242, overlap 1264254 1264252 GGCGATAGTGAGTAG CTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAG TTATATTTTATTGCG TERM 1672 1264776 - 1264791 + G 76 -3.2 -5.06735 | overlap 1264772 ACCGCTGAACACGCT GCGC AAGCTGAA GCGC TTTTTATCCTTTGTC TERM 1673 1264990 - 1265017 + G 70 -6.9 -4.08767 | overlap 1264991 ATCATTTTTGGTTTG GCCATACGCCG TTGCGC CGGCGCATGGA TTTTGCCAACGTACA prpA 1264440 - 1265090 + | serine/threonine protein phosphatase 1 yebW 1265300 - 1265109 - | putative secreted protein TERM 1674 1265402 - 1265381 - R 78 -6.5 -4.55759 | opp_overlap 1265381 1265384, overlap 1265384 AAAAGGAAGAATAAA TAACCCGCC TGGC GACGGGTTC TTTTTGAGTCAGGCA TERM 1675 1265384 - 1265399 + r 72 -6 -4.44608 | opp_overlap 1265381 1265384, overlap 1265381 AGGAAGAATAAATAA CCCGCC TGGC GACGGG TTCTTTTTGAGTCAG TERM 1676 1265399 - 1265384 - R 79 -8.2 -4.34486 | opp_overlap 1265384 1265381, overlap 1265381 AGGAAGAATAAATAA CCCGCC TGGC GACGGG TTCTTTTTGAGTCAG SEN1186 1265650 - 1265411 - | hypothetical protein TERM 1677 1265551 - 1265541 - G 70 -6.8 -4.128 | opp_overlap 1265541, overlap 1265537 AGTTGCATACATAAA TCCG GAT CGGA TTTACAGGGGATTGT TERM 1678 1265633 - 1265622 - G 74 -7.2 -4.13767 | opp_overlap 1265625 TCGTCGATTTCAAAA GCGC CAAT GCGC ACACTGGTTTTCATC yebU 1267204 - 1265765 - | hypothetical protein TERM 1679 1266080 - 1266069 - G 75 -5.8 -4.58395 | CCGAGCCGGGAAAAA CGGA CTTT TCCG ATCAGTGATTCAATT TERM 1680 1266559 - 1266569 + g 86 -6.8 -5.02074 | TATCCAGATTGCTTT CTGG CGA CCAG TTTTTTAGCGCATCA TERM 1681 1267275 - 1267250 - R 100 -12.5 -4.46926 | opp_overlap 1267249 1267248 1267266, overlap 1267231 1267251 CAGTGTAGCATAAAA CGCTCCGGCGC GAGT ACGCCGGAGCC GGGTGTTTAACGTGG TERM 1682 1267274 - 1267251 - R 100 -16 -3.27674 | opp_overlap 1267249 1267248 1267266, overlap 1267231 1267250 AGTGTAGCATAAAAC GCTCCGGCGC GAGT ACGCCGGAGC CGGGTGTTTAACGTG SEN1188 1269921 - 1267282 - | hypothetical protein TERM 1683 1268455 - 1268425 - GR 74 -11.1 -2.79796 | overlap 1268427 TTCCAGGTTAGCATA GAGCGGGTAGGTG GATTT CATCTTCCCGCTC GTACCGGGTAAAATA TERM 1684 1269599 - 1269541 - GR 71 -9.5 -3.14211 | opp_overlap 1269541 1269545, overlap 1269558 1269595 1269596 ATTCCCGCCGACCAA CGC-ATCCAGGCCGGAAACGCCCGCCAGC GAG GCTTT-GGGCGTCACCAGCCAGAATTGCG TCTCTTCGCGCAACG yebS 1271167 - 1269884 - | hypothetical protein TERM 1685 1270232 - 1270219 - GH 75 -3.7 -4.83615 | opp_overlap 1270222, overlap 1270222 TACTGGCGATAAAAA CGACG GCGG CGACG GCGATATTGCTGCTG yebR 1271209 - 1271793 + | hypothetical protein TERM 1686 1271821 - 1271840 + F 81 -12.2 -3.15996 | overlap 1271819 GTAGCAATTACTGAT GGCGTCAT TATA ATGACGCC TGTTCATGCCTGCTG TERM 1687 1272268 - 1272254 - g 85 -4.9 -5.17576 | CAGCAAGCGAAAAAA CGCGA AGCTG CCGCG GCGGCTGGCGAAAAA TERM 1688 1272329 - 1272287 - g 85 -9 -4.40561 | overlap 1272284 GCTGGCGAAAAAGAA GACGCGCCGCGACGCGAG CGTAAAC CTCGCCCGGTAGCGCGTC GTAAAGAAGGCGCTG TERM 1689 1272383 - 1272416 + G 74 -7.3 -4.1043 | gap 1, opp_overlap 1272372 1272369 1272381 1272380, overlap 1272383 CCGACGACGAAAGCG CCG-CGTGCGCCTCGC GAA GAGAAGCACACGCCGG TTTCTGATATTTCAG proQ 1271891 - 1272577 + | Activator of ProP TERM 1690 1272628 - 1272653 + G 83 -14.8 -2.72344 | GGCTTACCGCGTTAG CTGGCCTGCT TGCATT AGCAGGCCAG TCCTTCGCCGTGGAA TERM 1691 1272948 - 1272965 + G 74 -10.5 -3.60792 | opp_overlap 1272947 1272948 TACGATCTTTATAAC CTGGCGC AAAA GCGCCGG TTTGAACGTTACCAG TERM 1692 1274466 - 1274454 - g 73 -9.1 -3.91564 | opp_overlap 1274461 GAGAACAATGAAGAA GACGC TCT GCGTC TGGCGCGTATTAACG TERM 1693 1274628 - 1274616 - g 93 -4.7 -5.61881 | CTTGAAAAAGAAAAA CCAGC GGA GCAGG CGGCAGCCAATAAGT prc 1272597 - 1274645 + | tail-specific protease precursor TERM 1694 1274674 - 1274653 - f 95 -13.1 -3.69836 | opp_overlap 1274653, overlap 1274667 ATAAGTAACGCTAAA CAGGCACAA AAAA TTGTGCCTG TTTTTTTTTAACAAG TERM 1695 1274653 - 1274674 + F 100 -13.1 -6.06723 | opp_overlap 1274653 1274667 ATAAGTAACGCTAAA CAGGCACAA AAAA TTGTGCCTG TTTTTTTTTAACAAG TERM 1696 1275289 - 1275260 - g 70 -8.7 -3.73224 | gap 1, opp_overlap 1275269 TCATTGCGCATGAAA TCAGCCATATTGCC AAT GGCGATATGG-TGA CGATGACGTTGATTC SEN1193 1274839 - 1275720 + | possible heat shock protease TERM 1697 1275762 - 1275745 - T 95 -12.7 -4.3534 | opp_overlap 1275745 TGGCAAGTATGAAAA GCGCGTC GAAT GACGCGC TTTTTTTACGCCTGA TERM 1698 1275745 - 1275762 + T 100 -12.7 -5.42259 | opp_overlap 1275745 TGGCAAGTATGAAAA GCGCGTC GAAT GACGCGC TTTTTTTACGCCTGA SEN1194 1277141 - 1275768 - | putative membrane transport protein TERM 1699 1276666 - 1276655 - G 73 -5.8 -4.45485 | overlap 1276656 ATGAGATGGACAAAA TCGC TGCG GCGA TCGTCGGACCCGCGG TERM 1700 1277113 - 1277131 + g 74 -2.2 -5.09895 | overlap 1277112 1277115 TATCTCTGCGGGAGG GGCAGGCC ATC GGCCCGTG TTTTTTCCATAAGTA TERM 1701 1277115 - 1277129 + g 70 -7 -4.17608 | overlap 1277112 1277113 TCTCTGCGGGAGGGG CAGGCC ATC GGCCCG TGTTTTTTCCATAAG kdgR 1277317 - 1278108 + | transcriptional regulator KdgR TERM 1702 1278139 - 1278161 + T 100 -9.9 -5.626 | opp_overlap 1278139 TGACGTTAAAAAAAA GCAGCTACG AAAAA TGTAGCTGC TTTTTTTATAACATC TERM 1703 1278161 - 1278139 - T 100 -9.2 -5.78622 | opp_overlap 1278139 TGACGTTAAAAAAAA GCAGCTAC GAAAAAT GTAGCTGC TTTTTTTATAACATC SEN1196 1278559 - 1278320 - | hypothetical protein yobG 1278717 - 1278860 + | hypothetical protein TERM 1704 1279160 - 1279144 - g 77 -3.5 -5.00765 | overlap 1279147 AACGAACCAGAAAAA GAAGCGG AAC CCGCAAC AGCGGCAAGCGAACC TERM 1705 1279157 - 1279147 - g 87 -8.2 -4.58563 | overlap 1279144 GAACCAGAAAAAGAA GCGG AAC CCGC AACAGCGGCAAGCGA SEN1198 1278931 - 1279218 + | hypothetical protein TERM 1706 1279497 - 1279513 + F 75 -2.9 -5.26907 | overlap 1279505 AGAACATCACAAAAA GCGGTGT CGA AAATCGC TTTTCTTTTCTATTA TERM 1707 1279505 - 1279518 + F 71 -3.9 -4.88288 | overlap 1279497 ACAAAAAGCGGTGTC GAAAA TCGC TTTTC TTTTCTATTATTTTG yobF 1279867 - 1280010 + | hypothetical protein TERM 1708 1280168 - 1280150 - g 70 -6.7 -4.09739 | overlap 1280151 GCAATGGTTTCAAAA CTCTGGC TGAAG GCCAGAA CGTTGAGTTCGAAAT cspC 1280023 - 1280232 + | cold shock-like protein CspC TERM 1709 1280209 - 1280225 + F 70 -9.5 -2.94099 | overlap 1280189 CAGAAAGGTCCGGCT GCTGTTA ACG TAACAGC TATCTGATCGACACC TERM 1710 1280281 - 1280299 + F 100 -12.4 -4.89009 | opp_overlap 1280281 AGCCTCAGATATAAA GCCTCGCT AAA AGCGGGGC TTTTTAATTCAATAT TERM 1711 1280299 - 1280281 - f 87 -10.2 -4.128 | opp_overlap 1280281 AGCCTCAGATATAAA GCCTCGCT AAA AGCGGGGC TTTTTAATTCAATAT TERM 1712 1280366 - 1280382 + F 85 -3.7 -5.47914 | TTTGTTGCAAAGGCG CGATGTT ATT AGCATTG TTTTTTCTGGTTTTT TERM 1713 1280517 - 1280538 + G 71 -7.3 -3.9461 | TGCACTACTTTGCAC TGCCATTCT GCTC AGTATGGCA TTGTTGTTAGGGCGG TERM 1714 1280780 - 1280751 - g 71 -10.7 -3.28712 | gap 1, opp_overlap 1280759, overlap 1280752 1280754 CGGCGTTGGCTACAA TGAGCGCTGG-CAG GCG CTGGCCAGCGCCCT GCATCTGTCGCTCAG TERM 1715 1280779 - 1280752 - g 81 -14.2 -2.57132 | gap 1, opp_overlap 1280759, overlap 1280751 1280754 GGCGTTGGCTACAAT GAGCGCTGG-CAG GCG CTGGCCAGCGCCC TGCATCTGTCGCTCA TERM 1716 1280777 - 1280754 - g 79 -13.2 -2.82623 | gap 1, opp_overlap 1280759, overlap 1280752 1280751 CGTTGGCTACAATGA GCGCTGG-CAG GCG CTGGCCAGCGC CCTGCATCTGTCGCT SEN1201 1280452 - 1282197 + | penicillin-binding protein rrmA 1282263 - 1283072 + | rRNA guanine-N1-methyltransferase TERM 1717 1283104 - 1283082 - T 95 -12 -4.14392 | opp_overlap 1283082 1283081, overlap 1283083 CGTTAACCGTGAAAA TGCGTCCAGA GGA TCTGGACGCC AATTCCTATCAGTAC TERM 1718 1283082 - 1283105 + T 70 -10.4 -2.5655 | gap 1, opp_overlap 1283082 1283083, overlap 1283081 CGTTAACCGTGAAAA T-GCGTCCAGA GGA TCTGGACGCCA ATTCCTATCAGTACG TERM 1719 1283103 - 1283083 - T 93 -15.5 -3.08314 | opp_overlap 1283082 1283081, overlap 1283082 GTTAACCGTGAAAAT GCGTCCAGA GGA TCTGGACGC CAATTCCTATCAGTA yebN 1283689 - 1283069 - | hypothetical protein TERM 1720 1283902 - 1283928 + r 79 -8.2 -4.258 | AAATATTATTTGCCT TCTAATTGAAAA CGA TTTTCATTTAGA TTTATTCATCAATAA TERM 1721 1283994 - 1283979 - R 78 -6.2 -4.66537 | opp_overlap 1283979 TTGGTCAATAGAAAA TATAGC CTTA GCTATA TTATGATTCGAAATA SEN1204 1284503 - 1284045 - | hypothetical protein TERM 1722 1284527 - 1284546 + r 71 -10.6 -2.62184 | opp_overlap 1284528 CAGAGAAATAAAAAA ACGGGGCC GTTT GGCCCCGG TAGTGTACAACAGCC TERM 1723 1284545 - 1284528 - R 100 -14.1 -6.04953 | opp_overlap 1284527 AGAGAAATAAAAAAA CGGGGCC GTTT GGCCCCG GTAGTGTACAACAGC manZ 1285422 - 1284562 - | phosphotransferase enzyme II, D component TERM 1724 1284991 - 1284967 - G 72 -4.1 -4.81734 | opp_overlap 1284969, overlap 1284981 AAACAGGATGAAAAA CAGCAGCGGAC CAA GCAGGCTGCCG CTCATTGCAATACCT TERM 1725 1285367 - 1285377 + g 79 -3.2 -5.28778 | overlap 1285364 ACGCCGCGAATATCG CTCG GAG TGAG TTTTTTCTCGGTGGT manY 1286226 - 1285426 - | phosphotransferase enzyme II, C component manX 1287247 - 1286279 - | PTS system, mannose-specific IIAB component TERM 1726 1286362 - 1286372 + g 78 -6.8 -4.59853 | overlap 1286350 1286371 CAAGCTCGATGCCGC GCTC GTT GAGC TTTTTAAAGGCTTCG TERM 1727 1286811 - 1286839 + g 100 -9.4 -4.86033 | overlap 1286813 GGCGTGGCCGCTTTT GGCGCGGCGGCG ACTGG CGCTGGCGCGGC TTTTTCTACCGGTTT yoaE 1287720 - 1289279 + | hypothetical protein SEN1210 1290902 - 1289301 - | hypothetical protein TERM 1728 1289329 - 1289381 + g 81 -12.5 -3.09635 | opp_overlap 1289308 1289328, overlap 1289318 ATCGCGGACATAATC TGTCCGTTATGCCGGGCGGGCGGCG GCG CGCTGCCCGCCAGCCACTGTGGAAA TTCGCTAATGGGCAT TERM 1729 1290244 - 1290269 + g 89 -2.7 -5.63103 | gap 1 AAAGGGAAATGTCGC GATGAA-AGC TGGTAAC GCTCTTCATC TTTTTTTAATTCCGG TERM 1730 1291023 - 1290995 - R 100 -13.9 -5.10968 | overlap 1290996 AGGAAGAGATAAAAA TTTCGCCCATCCG TAG CAGATGGGCGAAG GGAGGGGAAACGGCG TERM 1731 1291022 - 1290996 - R 100 -17.4 -3.64954 | overlap 1290995 GGAAGAGATAAAAAT TTCGCCCATCCG TAG CAGATGGGCGAA GGGAGGGGAAACGGC sdaA 1292404 - 1291040 - | L-serine deaminase 1 TERM 1732 1292175 - 1292151 - G 89 -9.3 -4.63486 | overlap 1292170 ACGTCGCGAATAAAA CCGGGGATACT ATC AATATCCACGG TAGCGGGTTCATTAC yeaB 1293246 - 1292668 - | hypothetical protein TERM 1733 1293048 - 1293073 + g 70 -9.7 -3.35046 | gap 1, overlap 1293046 TACTGTCCACGGCCC CGCCGGGAAAGG CGA CCTGT-CCGGCG TGTTTGCGCAAATGA pabB 1294614 - 1293250 - | para-aminobenzoate synthase component I TERM 1734 1294818 - 1294852 + G 74 -7.2 -4.11216 | gap 2 GTGGCGGGCGAACTT CGCGCCAACCATACCG GCGAA CGG-ATAGT-GGCGCG TTTTGAGGATGAAGA yoaH 1294695 - 1294874 + | hypothetical protein yoaB 1295224 - 1294880 - | hypothetical protein TERM 1735 1295930 - 1295952 + G 80 -4.8 -5.07486 | overlap 1295931 GGCGATGGACGCGGA TGTGGTGATT GTA AACCACCACC TTTTTCTTGCGGATA yoaA 1295355 - 1297265 + | putative ATP-dependent helicase TERM 1736 1297463 - 1297502 + G 89 -13.6 -3.53811 | gap 1 GCAGGAGATTCTGGC CGCCAGCGGCGTCTCGCTC AAT GAGATAGATGC-GCTGGCG TTTGGGCGCGGTCCG yeaZ 1297323 - 1298018 + | hypothetical protein slp 1298090 - 1298671 + | putative lipoprotein TERM 1737 1298693 - 1298717 + F 86 -14.4 -2.56596 | opp_overlap 1298693 1298697, overlap 1298697 GTTTTATCAATAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCATAGAGAC TERM 1738 1298717 - 1298693 - f 100 -14.4 -4.71426 | opp_overlap 1298693 1298697, overlap 1298697 GTTTTATCAATAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCATAGAGAC TERM 1739 1298697 - 1298713 + F 77 -9.4 -3.98826 | opp_overlap 1298693 1298697, overlap 1298693 TATCAATAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCATAG TERM 1740 1298713 - 1298697 - f 93 -9.4 -4.90302 | opp_overlap 1298697 1298693, overlap 1298693 TATCAATAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCATAG fadD 1298876 - 1300561 + | long-chain-fatty-acid--CoA ligase TERM 1741 1300585 - 1300601 + F 100 -11.5 -5.75342 | opp_overlap 1300585 TCAGCTAACGAGAGA CGCCGGT TAA GCCGGCG TTTTTTTTGGCGCGA TERM 1742 1300601 - 1300585 - f 73 -10.8 -3.0127 | opp_overlap 1300585 TCAGCTAACGAGAGA CGCCGG TTAAG CCGGCG TTTTTTTTGGCGCGA TERM 1743 1300702 - 1300656 - g 83 -12.4 -3.74626 | gap 2, opp_overlap 1300655 1300654 1300652 ACCAAATGATTGAAA CGGACGATGCGCTGGCGAGCCT GTGTG AGGCTGTCC-GCGCAT-GTCCG GCTATTGCTTTAGAT rnd 1300634 - 1301761 + | ribonuclease D TERM 1744 1301856 - 1301827 - T 100 -15.3 -5.57054 | opp_overlap 1301834, overlap 1301834 AATAATGTAAAAAAA TAAAAAAGGCAGA TTCT TCTGCCTTTTTTA ATCCAGGAATTTTCC TERM 1745 1301849 - 1301834 - T 100 -9 -6.12458 | opp_overlap 1301834, overlap 1301827 TAAAAAAATAAAAAA GGCAGA TTCT TCTGCC TTTTTTAATCCAGGA TERM 1746 1301834 - 1301849 + T 100 -9 -5.14563 | opp_overlap 1301834 1301827 TAAAAAAATAAAAAA GGCAGA TTCT TCTGCC TTTTTTAATCCAGGA minE 1302149 - 1301883 - | cell division topological specificity factor TERM 1747 1301928 - 1301945 + g 76 -5.5 -4.72986 | opp_overlap 1301930 TACGTTAAGTTCAAG GATGGAG ATAT CACCATC TTTTTGCTCAAGCTG minD 1302965 - 1302153 - | septum site determining protein TERM 1748 1302634 - 1302614 - G 74 -10.5 -3.57144 | opp_overlap 1302614 1302613 CCGGCGAGTCGCAAA CGATGAACT CAA AGTCCATCG CTTTCAGTGAGTCCA TERM 1749 1302668 - 1302681 + g 71 -9.5 -3.5241 | overlap 1302669 CCTTAGCGACGCCTT CGCGC GTTA GCGCG TCTTTATCCCGGGTC minC 1303696 - 1302989 - | septum site-determining protein TERM 1750 1303587 - 1303574 - G 87 -8.1 -4.56597 | opp_overlap 1303573 1303571 1303574 GGCGTGTTTTAAAAA CGCAG GAGC CTGCG CTATTTTGTCTTCTA ycgL 1303783 - 1304115 + | hypothetical protein TERM 1751 1304514 - 1304503 - g 77 -3.6 -5.10154 | AGGGAAAATGAAAAA GGCC GGAC AGCC CTGGGAAAAAGCCAA ycgM 1304165 - 1304824 + | putative hydrolase ycgN 1304902 - 1305363 + | hypothetical protein SEN1227 1305715 - 1305852 + | hypothetical protein TERM 1752 1305885 - 1305901 + F 100 -10.1 -5.17054 | opp_overlap 1305873 CAACCGCCTGATGCA CCGTCTG TGC CAGGCGG TTTTTTACATCTTCT SEN1228 1306044 - 1306217 + | hypothetical protein SEN1229 1306630 - 1306289 - | hypothetical protein TERM 1753 1306717 - 1306732 + r 73 -10.4 -2.98823 | opp_overlap 1306717 TTCGGGCAAAAAAAA CGCTCC CGAA GGAGCG TGTGTATCAACGACC TERM 1754 1306732 - 1306717 - R 100 -10.4 -5.75342 | opp_overlap 1306717 TTCGGGCAAAAAAAA CGCTCC CGAA GGAGCG TGTGTATCAACGACC dsbB 1307269 - 1306739 - | disulfide bond formation protein B nhaB 1308955 - 1307411 - | regulator of intracellular pH; Na+/H+ antiporter TERM 1755 1308625 - 1308614 - G 72 -2.2 -4.86385 | overlap 1308616 ACGGGTAAAAATAAA CAGC AATA ACTG CTTCATAAAGTAGAT TERM 1756 1308939 - 1308920 - G 89 -9.2 -4.57569 | CGACTGGCCTAAAAA GTTGCGCC ACAT GGCGCGAC CCCATGAGATCTCCA fadR 1309175 - 1309894 + | fatty acid metabolism regulator protein ycgB 1311467 - 1309941 - | hypothetical protein TERM 1757 1310706 - 1310724 + g 75 -3.7 -4.87665 | AATTTCGCGCTGCCA CGGCTCG AGCAA CGGGGCG TTTTTCTCCATAAAA TERM 1758 1311559 - 1311549 - H 72 -3.2 -5.06451 | CACCATGTTAAAAAA CGAC TTG ATCG TGAAAACTTTTCTTT TERM 1759 1312004 - 1311994 - g 70 -5.4 -4.42788 | CTGAAGGCGATAAAA TGGA TGT TCCA GCGCCATGCGCCGCT TERM 1760 1312126 - 1312111 - g 76 -5.4 -4.70515 | gap 1, overlap 1312112 1312113 TATATGGAAAATAAA GGCCGCA TGG TGCG-CC TGGCGGAATATAGTC dadA 1311796 - 1313094 + | D-amino acid dehydrogenase small subunit dadX 1313108 - 1314178 + | Alanine racemase ycgO 1315974 - 1314241 - | Cell volume regulation protein A TERM 1761 1315306 - 1315275 - G 74 -2.2 -4.98531 | gap 1, overlap 1315281 1315283 TCGTCAAAGCAAAAA TCAGAATACCGCCGC TGA GCGCCAGCAT-CGGA TACAAGCCGCTGGGC TERM 1762 1315492 - 1315479 - G 75 -3.7 -4.8543 | opp_overlap 1315479 1315485 TAATGGTCAGAAAAA CGGCC ATCG GGTCG TTACTTCCCGATTCG ycgQ 1316985 - 1316071 - | hypothetical protein TERM 1763 1316862 - 1316852 - G 70 -6.8 -4.11216 | overlap 1316860 TCCGTACCGGCAAAA CGCT GAA AGCG GCGACGAATCACCTC TERM 1764 1316920 - 1316934 + g 75 -12.8 -2.55896 | opp_overlap 1316874, overlap 1316919 1316917 AGTCAGGCGCTGAAC GCCGCG TAA CGCGGC CTGTTGGTTAATACA TERM 1765 1317301 - 1317291 - g 90 -8.2 -4.68593 | CCCATCAGTGAAAAA GCCG GGG CGGC ATGGGGGGTTGATCC emtA 1317156 - 1317767 + | membrane-bound lytic murein transglycosylase E ycgR 1318515 - 1317781 - | hypothetical protein ymgE 1318684 - 1318938 + | hypothetical protein TERM 1766 1318958 - 1318985 + T 76 -12 -2.62184 | opp_overlap 1318951 TGCAGAACGTGTAAG CGTTGACCCGGT CAGC GCCGGGTCAACC TACTATAAACACGCG TERM 1767 1319010 - 1319023 + T 78 -5.9 -4.8543 | CACGCGTTACTGCGT CGCTG CAGA CGGCG TTTTTGTCGGCGTTG treA 1320713 - 1319001 - | Periplasmic trehalase TERM 1768 1319620 - 1319653 + g 75 -6.5 -4.3898 | overlap 1319622 TGCGAGGCTTTGGCC CGATCGCCCGCCGCA GCGC TGGCGCGGGCGAGGG TTTTCTCCAGCTGAT TERM 1769 1320886 - 1320903 + r 71 -7 -4.08767 | opp_overlap 1320886 GATACAGACAAAAAA TCCACG CCGGGA CGTGGA TTTTAGCGCAATAAC TERM 1770 1320903 - 1320886 - R 95 -7.7 -5.4492 | opp_overlap 1320886 GATACAGACAAAAAA TCCACGC CGGG ACGTGGA TTTTAGCGCAATAAC SEN1242 1322252 - 1320927 - | glutamate dehydrogenase TERM 1771 1321615 - 1321601 - G 70 -2.7 -4.82901 | opp_overlap 1321601 1321602 GCCCGCTGACAAAAA CGCCG CGCCC CGTCG CTTTTTCACGGCCCA TERM 1772 1322589 - 1322558 - R 85 -6.5 -5.24799 | opp_overlap 1322561, overlap 1322561 GTATAAAGATAAAAA TAACCGGAGTCAG ACGGCG CTGGCCCCGGTTT ACCTCTTTATTGTTG TERM 1773 1322586 - 1322561 - R 84 -8.2 -4.67478 | opp_overlap 1322561, overlap 1322558 TAAAGATAAAAATAA CCGGAGTCAG ACGGCG CTGGCCCCGG TTTACCTCTTTATTG TERM 1774 1322561 - 1322586 + r 74 -8.2 -3.84931 | opp_overlap 1322561 1322558 TAAAGATAAAAATAA CCGGAGTCAG ACGGCG CTGGCCCCGG TTTACCTCTTTATTG SEN1244 1323834 - 1322698 - | probable cytochrome oxidase subunit II SEN1245 1325390 - 1323846 - | cytochrome bd-II oxidase subunit I TERM 1775 1324758 - 1324734 - G 100 -14.3 -3.83998 | TGAGCCGATAGCAAA CGAGCGCAAGG CCA CCTCACGCTCG CGGCCACGTAGCAGA hyaF 1326313 - 1325465 - | hydrogenase-1 operon protein HyaF hyaE 1326714 - 1326310 - | hydrogenase-1 operon protein HyaE TERM 1776 1326455 - 1326426 - G 71 -4.3 -4.56597 | gap 1, opp_overlap 1326433, overlap 1326427 1326430 1326431 CGCCGTCTGTAAAAA CCAACGT-CGCCGG AAA CCGACGTACATTAA AGCGATCGCCGATAG hyaD 1327300 - 1326704 - | hydrogenase-1 operon protein HyaD SEN1249 1328028 - 1327297 - | probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit SEN1250 1329840 - 1328047 - | hydrogenase-1 large chain (nifE hydrogenase) TERM 1777 1328388 - 1328404 + g 83 -7.9 -4.67904 | ATTTCTCGGTATTGG CGGTGGC CAG GTCGCCG TTTTTCAGGTTGGTC SEN1251 1330955 - 1329837 - | hydrogenase-1 small subunit TERM 1778 1330503 - 1330517 + g 74 -7 -4.35017 | opp_overlap 1330499, overlap 1330505 GGCGATAATAGCGCT GGCGCC CGC GGCGGC TTTCTTCAGTTTTTC SEN1253 1332322 - 1331870 - | hypothetical protein TERM 1779 1332309 - 1332282 - G 95 -2.7 -5.85244 | overlap 1332286 AAGGAAAATAAAAAA CAACCGAAGTA CATAAT CACTTCGCCTG AATTCTGAAACATTT SEN1254 1333047 - 1332361 - | hypothetical protein TERM 1780 1333660 - 1333677 + r 95 -11.3 -4.46581 | opp_overlap 1333660 TTATGAAATGAAAAA TCCACGC CATT GCGTGGA TTTTATAGAGTTTTA TERM 1781 1333677 - 1333660 - R 100 -11.3 -5.01811 | opp_overlap 1333660 TTATGAAATGAAAAA TCCACGC CATT GCGTGGA TTTTATAGAGTTTTA ychF 1334831 - 1333740 - | putative ATP/GTP-binding protein TERM 1782 1334943 - 1334916 - R 70 -9.8 -2.94099 | opp_overlap 1334915 1334914 TTCGCCTATTATACA CGGCGTGCGGCA AAAA TGCCGCACATCA CTGGTTATTGCGCCT pth 1335532 - 1334948 - | Peptidyl-tRNA hydrolase TERM 1783 1335675 - 1335703 + H 77 -9.1 -3.96148 | GTTCAGAGTGTTATT TGTAAAGTTTTGT TAA ATGAAACTTTACA TTTGTGATCGCACCC ychH 1335808 - 1336086 + | hypothetical protein ychM 1337792 - 1336131 - | putative sulphate transporter TERM 1784 1337909 - 1337922 + r 75 -9.5 -3.60475 | opp_overlap 1337909 TTACAGACAAAAAAA CCCGC CGCA GCGGG TTTCAGATCCGGGTT TERM 1785 1337922 - 1337909 - R 100 -9.5 -5.76633 | opp_overlap 1337909 TTACAGACAAAAAAA CCCGC CGCA GCGGG TTTCAGATCCGGGTT prsA 1338888 - 1337941 - | Ribose-phosphate pyrophosphokinase TERM 1786 1339019 - 1339005 - R 75 -10 -3.62522 | CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAGCTCAGCTTGCC ipk 1340005 - 1339154 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 1787 1339617 - 1339574 - G 71 -6.1 -4.24342 | gap 3, opp_overlap 1339576, overlap 1339576 GTGGCCACGAACAAA GACCGG-GACG-TCGGCGCCGA GCG TCAG-GCCGAGCGTCGCCAGTT CATCAATGGAAAGCC TERM 1788 1339615 - 1339576 - G 70 -8.7 -3.72374 | gap 3, opp_overlap 1339576, overlap 1339574 GGCCACGAACAAAGA CCGG-GACG-TCGGCGCCGA GCG TCAG-GCCGAGCGTCGCCAG TTCATCAATGGAAAG TERM 1789 1339817 - 1339854 + g 77 -11.5 -3.57144 | gap 1, overlap 1339828 GACGATCAGGTTGTC TTCATTT-TCAACGCCGG TTA CCGGCGTTAATAAATGGA TTTCGCCATCGCGAC TERM 1790 1339828 - 1339842 + g 83 -12.8 -3.19656 | overlap 1339817 TGTCTTCATTTTCAA CGCCGG TTA CCGGCG TTAATAAATGGATTT lolB 1340625 - 1340002 - | outer membrane lipoprotein LolB precursor hemA 1340939 - 1342195 + | Glutamyl-tRNA reductase TERM 1791 1343072 - 1343037 - g 82 -5.2 -4.98911 | overlap 1343043 CAGCATAAAAACAAA GCGAAAGCGCTCTCGG TGCT CGGGGCGCGCATTCAC GCCGCCGAAACGGCA TERM 1792 1343133 - 1343091 - g 93 -12 -4.24002 | gap 1, opp_overlap 1343099, overlap 1343043 1343084 1343083 1343092 GCCGAAACGGCAAAA CGCCA-GCAGGCCGAGGCG TCAACG CGCCGCAACCTGCTTGGCA GCGGCGATCGCAGCG TERM 1793 1343132 - 1343092 - g 84 -13.3 -3.13919 | gap 1, opp_overlap 1343099, overlap 1343043 1343084 1343083 1343091 CCGAAACGGCAAAAC GCCA-GCAGGCCGAGGCG TCAACG CGCCGCAACCTGCTTGGC AGCGGCGATCGCAGC prfA 1342236 - 1343318 + | Peptide chain release factor 1 hemK 1343318 - 1344151 + | HemK protein, putative protoporphyrinogen oxidase TERM 1794 1344439 - 1344455 + G 73 -5.8 -4.51196 | gap 1 GATTATCGTCAGGCG CGCAGCC AGCA GGC-GCG TTTTATCGCTTTCCC sirC 1344148 - 1344537 + | putative regulator TERM 1795 1344832 - 1344820 - g 82 -5.5 -5.03747 | opp_overlap 1344828 AAAGTCCTGAAAAAA CGCCA GGG TAGCG CGGTATCGTTGGGCG ychA 1344541 - 1345350 + | putative regulator TERM 1796 1345519 - 1345535 + G 73 -10.9 -3.406 | GCACTACGTAACCGT TACCCAG AAG CTGGGTA TTCCTTACGTGTTCA TERM 1797 1345956 - 1345976 + G 77 -8.2 -4.14392 | opp_overlap 1345955 1345956, overlap 1345959 GCGTGATGAAAAAGG TCTCCGGC AACTC GCCGGTGA TTTTCGACGTTACCC kdsA 1345388 - 1346242 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1798 1346265 - 1346286 + T 100 -10.2 -5.36441 | TTTTAGCTTGTGTAG GCCGGATA AGATAC TATCCGGC TTTTTTATATCAGGC chaA 1347396 - 1346296 - | putative calcium/proton antiporter TERM 1799 1346865 - 1346845 - G 81 -3.9 -5.1963 | overlap 1346847 TTGAATCAACAAAAA TACGCCG TACATCG CGGCGGA AATTAACGCGACCAA TERM 1800 1346863 - 1346847 - G 70 -6.5 -4.21997 | overlap 1346845 GAATCAACAAAAATA CGCCG TACATCG CGGCG GAAATTAACGCGACC TERM 1801 1347191 - 1347174 - G 74 -6.9 -4.22535 | overlap 1347163 ACAAGCTTAAAATAA GCGATCC ATAG GGTTCGC CGAGTCGGTGCGCTA chaB 1347663 - 1347893 + | cation transport regulator ChaB ychN 1348326 - 1347973 - | hypothetical protein ychP 1348503 - 1349927 + | putative invasin narL 1350578 - 1349928 - | nitrate/nitrite response regulator protein NarL narX 1352367 - 1350571 - | nitrate/nitrite sensor protein NarX TERM 1802 1351775 - 1351730 - G 70 -9.7 -3.33492 | TTATTGAGCGCAGAA CCCAACGCGGCCATCTCATTG CGTC CACTGATATTGGCACGTTGGG TAAAGTCGCGCTGAC TERM 1803 1353209 - 1353193 - g 72 -2.1 -4.86731 | overlap 1353171 1353194 CTTTCCTAAACAAAA GCAGGGC GGC GCGCTGG GTCTGAACGGTGGTC TERM 1804 1353564 - 1353589 + G 70 -3.3 -4.69027 | gap 1, overlap 1353570 CTAAAACACAATTCC CGGATG-TGCAG ATC CTGCATTATGCG TTTTTCGGTCCGTTT TERM 1805 1353947 - 1353961 + G 89 -2.7 -5.4505 | overlap 1353939 TTTATTTCCGCGATT GGCGC GATTG GCGGC TTTTTTATTCCGAAA narK 1352708 - 1354105 + | nitrite extrusion protein (nitrite facilitator) TERM 1806 1354122 - 1354140 + F 100 -8.8 -5.83822 | TTTTGATTATCCTTT GCGCGG CGTTAGA CCGCGC TTTTTTTTACCTGTA TERM 1807 1354347 - 1354330 - f 76 -4.1 -5.07523 | opp_overlap 1354332, overlap 1354331 1354332 TATATATAAATAAAA CTCCTCC TCCA AAAGGAG TATGCAGGAGGTTTG TERM 1808 1354512 - 1354543 + G 74 -10.3 -3.57144 | gap 1, opp_overlap 1354535 GTAAATTCCTGGACC GGTTTCGCTACTTC AAGCA GAAG-GGCGAAACC TTTGCCGATGGGCAC TERM 1809 1354779 - 1354760 - g 73 -10.6 -3.33037 | overlap 1354753 ATGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG CGCAAGCTACTCCTG TERM 1810 1355637 - 1355616 - g 84 -8.7 -4.27584 | ACCCGGAATGGAAAA CCGTCGCTA TCAA CAGCAACGG TGAAATGGTGGCGCC TERM 1811 1356253 - 1356242 - g 78 -5.8 -4.72272 | opp_overlap 1356249, overlap 1356244 GTCGGCCAGGAAAAA CTGC GTCC GCAG ACCGGCTGGCAGCCG TERM 1812 1356894 - 1356907 + G 74 -6.7 -4.25056 | opp_overlap 1356885 ACGATATGAATACCT CGGAT ATGC ATCCG TTTATTCATCCGCTG narG 1354493 - 1358236 + | respiratory nitrate reductase 1 alpha chain TERM 1813 1358330 - 1358316 - g 73 -5.6 -4.60041 | AGTCACCTGTAAAAA CGTCTG GAC CAGTCG CGAAGGTATGGAATA TERM 1814 1358620 - 1358592 - g 71 -9.6 -3.48105 | gap 1, opp_overlap 1358596, overlap 1358590 GGAAGGCAGCAAACA TCAGCCGATCGCG CGTC CGCGCTCG-CTGA TTACCGGCCAGCGGA narH 1358233 - 1359771 + | respiratory nitrate reductase 1 beta chain TERM 1815 1359884 - 1359900 + G 86 -10.1 -4.25848 | opp_overlap 1359884 1359879, overlap 1359885 CCTGGAGAAAGAGGA TGCCCAG ACT CTGGGCG TTTTCCTGCGCGATT TERM 1816 1359885 - 1359899 + G 72 -11.4 -3.15027 | opp_overlap 1359884 1359879, overlap 1359884 CTGGAGAAAGAGGAT GCCCAG ACT CTGGGC GTTTTCCTGCGCGAT narJ 1359768 - 1360478 + | respiratory nitrate reductase 1 delta chain narI 1360478 - 1361155 + | respiratory nitrate reductase 1 gamma chain TERM 1817 1361191 - 1361176 - f 79 -10.4 -3.55444 | opp_overlap 1361176 TCTCGATGCCCTAAA CTCCGC TTCG GCGGAG TTTTTTTATGGCTGT TERM 1818 1361176 - 1361191 + F 100 -10.4 -5.65177 | opp_overlap 1361176 TCTCGATGCCCTAAA CTCCGC TTCG GCGGAG TTTTTTTATGGCTGT TERM 1819 1361565 - 1361551 - g 71 -8.5 -3.90574 | AACAAGGAGATGAAA GCGCG CAGTT CGCGC TTGGAAGCTGGTATG TERM 1820 1361631 - 1361613 - g 71 -7.4 -3.96892 | overlap 1361616 AAGCCTGATTATAAA CTAGCCAT AAA ATGGCTGG AGAAAGCGGGTAAAC SEN1279 1361451 - 1362926 + | putative secreted protein TERM 1821 1363077 - 1363095 + T 79 -8.8 -4.02534 | overlap 1363066 1363078 GTTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTTTCGCT TERM 1822 1363078 - 1363094 + T 80 -12.3 -3.00797 | overlap 1363066 1363077 TTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTTTCGC TERM 1823 1363252 - 1363270 + T 77 -8.8 -3.92373 | overlap 1363241 1363253 GCTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGCGCTC TERM 1824 1363253 - 1363269 + T 80 -12.3 -2.95102 | overlap 1363241 1363252 CTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGCGCT TERM 1825 1363426 - 1363444 + T 77 -8.8 -3.92075 | overlap 1363415 1363427 GCTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGACGCT TERM 1826 1363427 - 1363443 + T 80 -12.3 -2.94924 | overlap 1363415 1363426 CTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGACGC TERM 1827 1363721 - 1363737 + T 88 -12.3 -3.57797 | CCTCACCCTACGGGC CGTTGCC GTT GGCAACG TTCTCTCGCTTTCGC TERM 1828 1364011 - 1364027 + T 88 -12.3 -3.5518 | CCTCACCCTTCGGGC CGTTGCC TGC GGCAACG TTCTCTCACTATTGC TERM 1829 1364162 - 1364133 - T 70 -10 -3.06261 | gap 1, opp_overlap 1364134 GGGTAATGCTTAATA CTGGCCCGCTTCC TTTTG GGAAGCGGGGC-G CATCATATCAAATGA purU 1365115 - 1364273 - | formyltetrahydrofolate deformylase TERM 1830 1364337 - 1364306 - G 73 -5.8 -4.41616 | gap 1, overlap 1364308 ATTGCCGTAAACAAA GACTCGCTGTGCCAG AAC CTGATACAGCGCG-C GGCTTAATACGTTTT TERM 1831 1364336 - 1364308 - G 76 -9.5 -3.81557 | overlap 1364306 TGCCGTAAACAAAGA CTCGCTGTGCCAG AAC CTGATACAGCGCG CGGCTTAATACGTTT ychJ 1365624 - 1365166 - | hypothetical protein TERM 1832 1365663 - 1365649 - H 100 -7.8 -5.47159 | opp_overlap 1365659 1365660, overlap 1365650 CCTGAATATAAAAAA CGGCGT TGA ACGCCA GGGTGGCATTATGTT TERM 1833 1365662 - 1365650 - H 77 -9.1 -3.87211 | opp_overlap 1365659 1365660, overlap 1365649 CTGAATATAAAAAAC GGCGT TGA ACGCC AGGGTGGCATTATGT ychK 1365735 - 1366640 + | hypothetical protein TERM 1834 1367018 - 1367000 - g 71 -4.5 -4.66537 | overlap 1367002 TTCCGCAACAGAAAA TATGGCG GATAT CGCCAAA GCGTTACGCCTTGGG hnr 1366731 - 1367744 + | putative regulatory protein galU 1367947 - 1368855 + | glucose-1-phosphate uridylyltransferase TERM 1835 1368883 - 1368901 + T 100 -9.5 -5.64274 | opp_overlap 1368883 AATTTTTTAACAGAA GCGCTGG TAAAT CCGGCGC TTTTTTTATGCCTGG TERM 1836 1368948 - 1368964 + T 100 -13.7 -4.11216 | opp_overlap 1368948 CTCAGGCAAAAAAAA TCCCGCC AGC GGCGGGA TTTTAAGCATCCAGG TERM 1837 1368964 - 1368948 - T 100 -13.7 -5.81412 | opp_overlap 1368948 CTCAGGCAAAAAAAA TCCCGCC AGC GGCGGGA TTTTAAGCATCCAGG hns 1369400 - 1368987 - | H-ns protein (histone-like protein Hlp-II) TERM 1838 1369064 - 1369078 + g 78 -7.1 -4.55128 | opp_overlap 1369051 CAGCCGGTGTACGAC CCTGG CCAGT CCAGG TTTTAGTTTCACCGT tdk 1370063 - 1370680 + | Thymidine kinase TERM 1839 1370848 - 1370831 - T 100 -12.7 -6.09196 | opp_overlap 1370831 GGTAAAACAAAAAAA CGGCCTC AATT GAGGCCG TTATTGTCATGCTAA TERM 1840 1370831 - 1370848 + T 95 -12.7 -3.85864 | opp_overlap 1370831 GGTAAAACAAAAAAA CGGCCTC AATT GAGGCCG TTATTGTCATGCTAA TERM 1841 1370881 - 1370894 + T 83 -4.5 -5.43487 | opp_overlap 1370881 CAGATAACGAATTAA GCGGA TTTT TTCGC TTTTTTCTCTGCTTT adhE 1373555 - 1370877 - | alcohol dehydrogenase TERM 1842 1372673 - 1372689 + g 71 -4.3 -4.59773 | overlap 1372674 GCTGACCGACGATAG CGGCGTT CAG AGCGCCA TTTTTCAGGATAACG TERM 1843 1373256 - 1373240 - G 74 -8 -3.95378 | CGATACCGCAAATAA TGCCGA TAGGT TCGGCA ATGGTGATGGTCCCG TERM 1844 1374105 - 1374119 + G 77 -7.8 -4.26076 | overlap 1374099 1374106 CGCTGGTTAACCCGG TGGGGA TTA TCCCCG TTTTCATCAGCATGA ychE 1374032 - 1374679 + | hypothetical protein TERM 1845 1374701 - 1374722 + F 90 -13.7 -3.36492 | gap 1 ACCTGCTGATTTACA GGCGGCGCCC TAA GGG-GCCGCC TTGTGACATTCCCAC TERM 1846 1375926 - 1375908 - g 74 -2.4 -5.00884 | gap 1, overlap 1375909 ATCGCCGGTAAAAAA CCCGCCA CCGATC TGG-GGG TAAAAGCGCTTGATG oppA 1375443 - 1377074 + | periplasmic oligopeptide-binding protein precursor (OppA) TERM 1847 1377078 - 1377113 + F 82 -5.4 -5.14965 | opp_overlap 1377083 1377085, overlap 1377080 1377082 1377083 1377085 ATCAAACATTAATGG CAAGACATGGGACAAC TGCG GTTGTCCCATGGTGTC TTTTTTCATCGCACT TERM 1848 1377080 - 1377111 + F 76 -8 -4.20707 | opp_overlap 1377083 1377085, overlap 1377078 1377082 1377083 1377085 CAAACATTAATGGCA AGACATGGGACAAC TGCG GTTGTCCCATGGTG TCTTTTTTCATCGCA TERM 1849 1377082 - 1377109 + F 93 -12.8 -3.69447 | opp_overlap 1377083 1377085, overlap 1377080 1377078 1377083 1377085 AACATTAATGGCAAG ACATGGGACAAC TGCG GTTGTCCCATGG TGTCTTTTTTCATCG TERM 1850 1377108 - 1377083 - f 93 -16.3 -3.10732 | opp_overlap 1377083 1377082 1377080 1377078 1377085, overlap 1377085 ACATTAATGGCAAGA CATGGGACAAC TGCG GTTGTCCCATG GTGTCTTTTTTCATC TERM 1851 1377083 - 1377108 + F 93 -16.3 -2.80583 | opp_overlap 1377083 1377085, overlap 1377082 1377080 1377078 1377085 ACATTAATGGCAAGA CATGGGACAAC TGCG GTTGTCCCATG GTGTCTTTTTTCATC TERM 1852 1377085 - 1377106 + F 82 -13.1 -2.92912 | opp_overlap 1377085 1377083, overlap 1377083 1377082 1377080 1377078 ATTAATGGCAAGACA TGGGACAAC TGCG GTTGTCCCA TGGTGTCTTTTTTCA TERM 1853 1377106 - 1377085 - f 82 -13.1 -3.10879 | opp_overlap 1377083 1377082 1377080 1377078 1377085, overlap 1377083 ATTAATGGCAAGACA TGGGACAAC TGCG GTTGTCCCA TGGTGTCTTTTTTCA oppB 1377196 - 1378116 + | oligopeptide transport system permease protein (OppB) TERM 1854 1378163 - 1378151 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA oppC 1378131 - 1379039 + | oligopeptide transport system permease protein (OppC) oppD 1379051 - 1380058 + | oligopeptide transport ATP-binding protein (OppD) oppF 1380055 - 1381059 + | oligopeptide transport ATP-binding protein (OppF) TERM 1855 1381066 - 1381086 + F 100 -15.5 -4.21812 | opp_overlap 1381061 1381060 CCGTTATAATCGCAA GGGCTGACA ATT TGTCAGCCC TTCTTTTAGGTGAGG SEN1294 1381161 - 1381943 + | possible ion transport protein cls 1383814 - 1382354 - | Cardiolipin synthetase TERM 1856 1384158 - 1384139 - R 100 -15 -3.91897 | opp_overlap 1384128 1384125 1384152 TGTGTGAGCCAGAAA GGGCACCG TATG CGGTGCCC AACAGGCCATCCTTT yciI 1384470 - 1384174 - | hypothetical protein tonB 1384694 - 1385422 + | TonB protein yciA 1385882 - 1385481 - | putative acyl-coA hydrolase TERM 1857 1385553 - 1385541 - G 70 -3.3 -4.68511 | GGCAACATAAATAAA CAGCG CCT CGGTG GCCTTGTAGCGCTGT yciB 1386582 - 1386043 - | probable intracellular septation protein TERM 1858 1386221 - 1386208 - G 85 -2.3 -5.4833 | GCACGCAATAAAAAA CAGCG CCCA CGCCA GGTTCAGCTTTGACC TERM 1859 1386504 - 1386471 - G 85 -11.1 -3.92869 | gap 1, opp_overlap 1386495, overlap 1386474 1386495 1386498 GCACCCAGCTATAAA TCAGCAC-GATTGCCG TCG CGACAATCAGTGCGGA GGTCGCCGCATAGAT TERM 1860 1386501 - 1386474 - G 72 -11.4 -3.02745 | gap 1, opp_overlap 1386495, overlap 1386471 1386495 1386498 CCCAGCTATAAATCA GCAC-GATTGCCG TCG CGACAATCAGTGC GGAGGTCGCCGCATA TERM 1861 1386608 - 1386637 + r 72 -10.8 -2.77344 | gap 1, opp_overlap 1386605, overlap 1386607 CATCATCAACGAGCG TCG-AATGCGCCG CGTAA CGGCGCATTGCGG ATTATTGGCGAATCA yciC 1387382 - 1386639 - | hypothetical protein SEN1301 1387812 - 1387408 - | hypothetical protein TERM 1862 1387640 - 1387650 + g 74 -3.2 -4.90266 | opp_overlap 1387632 CCAATTAGCGCTTTA CAGT GCG GCTG TTTTTGGTTGGTACC TERM 1863 1388072 - 1388090 + H 74 -8.2 -3.86634 | opp_overlap 1388067 1388071 1388072 ATTATAAGAACAAAT GTGATCTG TGT TAGATCAC TTATTACTTCATTGT ompW 1388150 - 1388788 + | putative outer membrane protein TERM 1864 1388831 - 1388813 - T 100 -16 -5.14563 | GTTGTGACGAAAAAA GACCCCGC CAG GCGGGGTC AAAAAAGGACATGAC SEN1303 1389748 - 1388870 - | hypothetical protein yciE 1390274 - 1389768 - | hypothetical protein yciF 1390851 - 1390348 - | hypothetical protein TERM 1865 1390424 - 1390436 + g 70 -5.5 -4.42464 | overlap 1390425 AAATCAGTTTGTTTT TCCTC GTC GAGGG TTTCTTTGAGCAGTT TERM 1866 1390899 - 1390875 - R 71 -7.2 -4.07568 | gap 1, opp_overlap 1390876 1390877, overlap 1390877 TTCTCCTGGGCAAAA TACTGCGAGCC AGAA GACTCGCAG-A TTGCTTGATAAAAGC TERM 1867 1390898 - 1390877 - R 88 -12.3 -3.63744 | opp_overlap 1390877 1390876, overlap 1390875 CTCCTGGGCAAAATA CTGCGAGCC AGAA GACTCGCAG ATTGCTTGATAAAAG yciG 1391123 - 1390941 - | hypothetical protein TERM 1868 1391171 - 1391158 - R 70 -2.3 -5.00616 | overlap 1391159 TGCTTGCTGAAAAAA TCGGT TTTA ACCGT GTCGACACCCTATTA TERM 1869 1391276 - 1391286 + r 72 -2.6 -5.09259 | opp_overlap 1391276, overlap 1391271 ATGGTTTAGAGATAA TATA TTC TATA TTTTCTTTTAGAATA TERM 1870 1391567 - 1391599 + r 74 -11.3 -2.82742 | opp_overlap 1391572, overlap 1391564 1391572 CGGCGCCAGCCACTC ATTAAGCCGCCAGCG TTA TGCTGACGGCTTAAC TCGTTATGCGCGGCT TERM 1871 1391594 - 1391572 - R 81 -12.7 -3.18912 | opp_overlap 1391572 1391567 1391564 CCAGCCACTCATTAA GCCGCCAGC GTTAT GCTGACGGC TTAACTCGTTATGCG TERM 1872 1391572 - 1391594 + r 77 -11.2 -3.14963 | opp_overlap 1391572, overlap 1391567 1391564 CCAGCCACTCATTAA GCCGCCAGCG TTA TGCTGACGGC TTAACTCGTTATGCG trpA 1392409 - 1391603 - | tryptophan synthase alpha chain trpB 1393602 - 1392409 - | tryptophan synthase beta chain trpC 1394970 - 1393612 - | Indole-3-glycerol phosphate synthase TERM 1873 1393672 - 1393650 - G 70 -9.8 -3.34236 | opp_overlap 1393671, overlap 1393652 AAACCGAGGCCAGAA GACGAGCATC TTT GATGCCCGGC TGTGACTCCACACCT TERM 1874 1393670 - 1393652 - G 74 -11 -3.23572 | overlap 1393650 ACCGAGGCCAGAAGA CGAGCATC TTT GATGCCCG GCTGTGACTCCACAC TERM 1875 1394583 - 1394570 - G 71 -8.1 -3.81287 | GAGAGCATCAGTAAA CAGGC ATCG GCCTG ATAGTAACGGGCAAG trpD 1396569 - 1394974 - | Anthranilate phosphoribosyltransferase TERM 1876 1395148 - 1395166 + g 71 -4.4 -4.63932 | opp_overlap 1395148 TTTACCTTGTAATAA CCGCGTCA GAA TGTCACGG TTTTCTTCCGGCGTG TERM 1877 1395447 - 1395464 + g 70 -2.7 -4.74706 | gap 1, overlap 1395435 1395450 TCAGCGGGCCGAGTA CGTTGAAC AGG GTTC-GCG TTTTTAACTGTTGGC trpE 1398131 - 1396569 - | anthranilate synthase component I TERM 1878 1397342 - 1397325 - G 70 -6.9 -4.1899 | GCAGGGCAGTGAAAA GCGGCGC GACG GCACCAC CTGAAATATCTCCCC TERM 1879 1398180 - 1398162 - H 100 -10.2 -5.75342 | TTTGTTCAAAAAAAA GCCCGCTT AAC AGGCGGGC CGGGTATCGTTTGGC TERM 1880 1398675 - 1398696 + G 74 -6.6 -4.36914 | overlap 1398677 GTCTGAATATTGATA TTGCGCAT CCGGCA ATGCGCGA TTTTCTGGCGCAGCA TERM 1881 1398799 - 1398841 + G 74 -8.3 -3.9712 | gap 1, overlap 1398800 GGAAGGGGCATTGAG ACTGGCCAA-TGGCGGCGCG GTGA CGCGCGGCCACTTCGCCCGC TTTCTGGTGGAGTGC TERM 1882 1398800 - 1398840 + G 75 -11.8 -2.97951 | gap 1, overlap 1398799 GAAGGGGCATTGAGA CTGGCCAA-TGGCGGCGCG GTGA CGCGCGGCCACTTCGCCCG CTTTCTGGTGGAGTG trpH 1398392 - 1399273 + | hypothetical protein TERM 1883 1399495 - 1399535 + G 71 -8.4 -3.86202 | gap 1 TGATGTGCCGCGATT TGTCCGAGTTGTCGACCTA CTCC TACGTCGACAACGTGG-CA TTTCGTCTGATGAAA yciO 1399281 - 1399901 + | hypothetical protein TERM 1884 1399952 - 1399935 - f 76 -8.3 -4.07885 | opp_overlap 1399931 1399935 1399936, overlap 1399922 1399936 TACGCGGCCTTAAAA TGGCGCG GCAA CGCGCCG TTCATTCTCCTGTTC TERM 1885 1399935 - 1399952 + F 79 -10.5 -3.49851 | opp_overlap 1399922 1399935 1399936, overlap 1399931 1399936 TACGCGGCCTTAAAA TGGCGCG GCAA CGCGCCG TTCATTCTCCTGTTC TERM 1886 1399936 - 1399951 + F 76 -11.8 -2.69188 | opp_overlap 1399922 1399936 1399935, overlap 1399935 1399931 ACGCGGCCTTAAAAT GGCGCG GCAA CGCGCC GTTCATTCTCCTGTT TERM 1887 1399951 - 1399936 - f 78 -11.8 -3.04517 | opp_overlap 1399935 1399931 1399936, overlap 1399922 1399935 ACGCGGCCTTAAAAT GGCGCG GCAA CGCGCC GTTCATTCTCCTGTT TERM 1888 1400120 - 1400105 - g 80 -9 -4.13767 | opp_overlap 1400102 1400105 GCGTTGACGGTAAAA TCGCCA CGCT TGGCGA TCGTGTTGAAGTCAC TERM 1889 1400690 - 1400668 - g 74 -10.4 -3.53091 | ATCCCGCTGCCGAAA GGCCTGCCGC GCG GCGGCTGGAC TGAGCTCGACCTCGC yciL 1400002 - 1400877 + | putative pseudouridine synthase TERM 1890 1400918 - 1400947 + T 74 -10.8 -3.14931 | gap 1, opp_overlap 1400916 1400918, overlap 1400921 AATCATCAGACAAGA GG-GTTTGTGCCG GATGG CGGCGCAAACGCC TTAATCCGGCCTACG TERM 1891 1400946 - 1400918 - T 70 -8.8 -3.36018 | opp_overlap 1400918 1400921, overlap 1400916 AATCATCAGACAAGA GGGTTTGTGCCG GATGG CGGCGCAAACGC CTTAATCCGGCCTAC btuR 1401554 - 1400964 - | COB(I) alamin adenosyltransferase TERM 1892 1401105 - 1401121 + g 73 -10.8 -3.3676 | CGTCTGGTGACCAGG GCGCGC GTTTA GCGCGC TTATGACCTCTTCCA yciK 1402312 - 1401551 - | hypothetical oxidoreductase TERM 1893 1402151 - 1402168 + g 77 -7.7 -4.2772 | gap 1 CTCGTCAGCAATGTG CTGCG-CG ACC CGACGCAG TTTCTCTTCGTTGCG sohB 1402550 - 1403596 + | putative protease TERM 1894 1403605 - 1403633 + T 90 -16.1 -2.56596 | opp_overlap 1403599 1403598, overlap 1403600 GATGTAAACCGCTAT TGCCGGATGGC ATTCAGC GCCATCCGGCA TGGATTAATCAACCA yciN 1403889 - 1403638 - | hypothetical protein TERM 1895 1403673 - 1403708 + g 74 -7.7 -4.11692 | gap 1, opp_overlap 1403672, overlap 1403668 TCTCAGACAGCACAT GCGCC-AGGTGTTTAA ACATG TTAAACACCGCGGTGC TTTTAGGGGTCGGTA TERM 1896 1405213 - 1405202 - g 71 -4.4 -4.63218 | opp_overlap 1405212 TTGGCGTGAAGAAAA CCAT GATG ATGG CGCAGCGTCTGTATG TERM 1897 1405874 - 1405856 - g 76 -3.1 -5.03314 | overlap 1405858 TCTATGCGGAAAAAA TGGGTGA AATCG TCACCGA TCGGCTGGAAGAAAA topA 1404292 - 1406889 + | DNA topoisomerase I, omega protein I TERM 1898 1406918 - 1406935 + F 100 -14.1 -5.37043 | opp_overlap 1406916 CCACTGTAGTCAAGC GGGCCGC GTAA GCGGCCC TTTTTTATATCCCCT cysB 1407300 - 1408274 + | cys regulon transcriptional activator TERM 1899 1409104 - 1409079 - f 72 -9.1 -3.55622 | opp_overlap 1409079 TCTAATCTCGTCAAA GCCCGATAA TGCGTTAT TTATCGGGC TTTTTCATCTTCGTT TERM 1900 1409079 - 1409104 + F 93 -9.1 -4.90136 | opp_overlap 1409079 TCTAATCTCGTCAAA GCCCGATAA TGCGTTAT TTATCGGGC TTTTTCATCTTCGTT TERM 1901 1409506 - 1409520 + G 71 -10 -3.54543 | TGGCGGCCCGCCCGT GTCCTG ATG CAGGAC TTTACCGGCGTGCCT TERM 1902 1411545 - 1411535 - g 100 -8.2 -5.19212 | opp_overlap 1411534 ACCAGCAGGAAAAAA CGCC GCT GGCG GTAATTGCCGGGAAA acnA 1409251 - 1411926 + | aconitate hydratase 1 (citrate hydro-lyase 1) ribA 1412572 - 1411982 - | GTP cyclohydrolase II pgpB 1412768 - 1413532 + | phosphatidylglycerophosphatase B yciS 1413682 - 1413990 + | hypothetical protein TERM 1903 1414137 - 1414081 - g 76 -3.2 -5.09762 | gap 2 GCGCAACAAACAAAA CAGGATGAAGCTAACCGCCTGTCG CGCGATTATGT CG-CAGG-GGTTAACTTCCTGCTG AGTAACCAACAAGAT yciM 1414051 - 1415166 + | hypothetical protein TERM 1904 1415704 - 1415676 - g 83 -14.5 -2.82623 | opp_overlap 1415676, overlap 1415673 GTGGGGCGAGAATGA TGGCCGCAGCGCG CGA CGCGCTGGCGCCA TTCGGTAAAGATGCG TERM 1905 1415676 - 1415704 + G 91 -14.5 -3.06183 | opp_overlap 1415673 1415676 GTGGGGCGAGAATGA TGGCCGCAGCGCG CGA CGCGCTGGCGCCA TTCGGTAAAGATGCG pyrF 1415357 - 1416094 + | Orotidine 5'-phosphate decarboxylase yciH 1416094 - 1416420 + | putative translation initiaiton factor TERM 1906 1416452 - 1416427 - T 100 -11.9 -4.4078 | GGCGGCTAATGAAAA CGCCACGGT TGTAAATT ACCGTGGCG TAAAAGTCAACTTTG yciT 1417769 - 1417017 - | putative regulatory protein TERM 1907 1417539 - 1417550 + g 74 -7.2 -4.18058 | CGAGGCGGCGAACTC CGCC AGTC GGCG TTTTAGCGTGTAGTT yciR 1420139 - 1418157 - | hypothetical protein TERM 1908 1418984 - 1418969 - G 77 -3.9 -5.00616 | TTTCCGGCGAAAAAA CGCAG AACTGA CCGCG GCCGCCTTCTTTGGC TERM 1909 1419674 - 1419625 - G 100 -10.2 -5.42259 | opp_overlap 1419625 1419628, overlap 1419636 CCATTGCGAAAAAAA TTCTCAATGTAGT-GCCGGGAGGC AACC GCCTCCCGGCGACT-CATAAATAA TTTAAAGACGCTTTG TERM 1910 1419664 - 1419636 - G 89 -16.8 -2.54655 | gap 1, opp_overlap 1419628 1419625, overlap 1419625 AAAATTCTCAATGTA GT-GCCGGGAGGC AACC GCCTCCCGGCGAC TCATAAATAATTTAA TERM 1911 1420005 - 1420021 + g 90 -4.4 -5.4251 | gap 1 ACGCCCGGCTTGCTC CGG-CGA TAGC TCGACCG TTTTTTCTGTATCCG TERM 1912 1420381 - 1420355 - R 100 -14.5 -4.96427 | GAAGAAGAAAAGAAA CGGCCTTTGCC TTCTC AGCAAAGGCCG TTGAGCGAGCTAAGC rnb 1422335 - 1420401 - | Exoribonuclease II TERM 1913 1421453 - 1421439 - G 80 -4.2 -5.00616 | overlap 1421441 GGTGGCCGCAAAAAA GGCGAT ATC ATCGTC AATGGTGCCGTCCGC TERM 1914 1422434 - 1422446 + r 72 -4.8 -4.60924 | ATGAGTTAATAGGTT TCGC CCAAC GCGA TTTTTAAACGATTTA yciW 1423557 - 1422424 - | hypothetical protein TERM 1915 1422552 - 1422542 - G 74 -2.4 -5.03715 | AGTAGCGGGAAAAAA TGCG CGG CGCT AAAGCGATCGGGCGC fabI 1424545 - 1423757 - | enoyl-[acyl-carrier-protein] reductase (NADH) SEN1335 1425150 - 1426523 + | hypothetical protein TERM 1916 1426901 - 1426924 + F 73 -2.4 -5.20534 | ATATATTGTTTTTTT CGATCATTTT TTAT ATATTGATCG TTTTTATTGATTGAT SEN1336 1426990 - 1427697 + | hypothetical protein sapF 1428519 - 1427713 - | peptide transport system ATP-binding protein SapF TERM 1917 1428052 - 1428024 - G 80 -8.7 -4.09685 | opp_overlap 1428025, overlap 1428006 1428025 1428027 CTTTAGGGCGTAAAA TCAGCGCGCGGGC CAG GCCCAGACGCTGT TTCTGCCCCGGCGCC TERM 1918 1428051 - 1428025 - G 76 -12.2 -3.05597 | opp_overlap 1428025, overlap 1428006 1428024 1428027 TTTAGGGCGTAAAAT CAGCGCGCGGGC CAG GCCCAGACGCTG TTTCTGCCCCGGCGC sapD 1429513 - 1428521 - | peptide transport system ATP-binding protein SapD sapC 1430403 - 1429513 - | peptide transport system permease protein SapC TERM 1919 1430122 - 1430098 - G 85 -11.3 -3.96624 | CAGCGTTACGATAAA CGCGCCGCCGA CCG TGGGCGCCGCG CCGCTTAACAGGCGG sapB 1431184 - 1430390 - | peptide transport system permease protein SapB TERM 1920 1430883 - 1430893 + g 71 -8.2 -3.78329 | opp_overlap 1430883 TCAATGATGGCGAAA CCGG TAA CCGG TTTAACTTCATAAAG sapA 1433001 - 1431352 - | peptide transport periplasmic protein SapA precursor pspF 1434093 - 1433113 - | psp operon transcriptional activator PspF TERM 1921 1433198 - 1433226 + g 72 -2.5 -4.87626 | gap 1, opp_overlap 1433213, overlap 1433213 TTCTGGTTAAATTTC GC-CTGTTGTAA GCTACG TTGCAGCAGCGC TTTTTCCTGTTGCAG TERM 1922 1434339 - 1434327 - g 89 -9.1 -4.56597 | GCGTTGTTGGAAAAA GCGGA AGA TCCGC AGAAGCTGGTGCGCC pspA 1434264 - 1434926 + | phage shock protein A pspB 1434986 - 1435210 + | phage shock protein B pspC 1435210 - 1435569 + | phage shock protein C pspD 1435592 - 1435810 + | phage shock protein D pspE 1435886 - 1436200 + | phage shock protein E precursor TERM 1923 1436208 - 1436198 - f 89 -4 -5.72207 | opp_overlap 1436198 CCGAAAGTAAAAAAA TAGA TAA TCTA TTGCTCAATACTCAT TERM 1924 1436232 - 1436248 + F 83 -10.8 -3.80018 | opp_overlap 1436229 TACTCATACTAACCG CGGCGC TTAAT GCGCCG TTGTTGATCTCTCCG TERM 1925 1436297 - 1436312 + F 71 -3.3 -4.84921 | TTTTGCACATATCTA TAACG CAGGCT CGTTA TTATTTTTTCTTCTC TERM 1926 1436935 - 1436909 - g 77 -7.2 -4.25283 | gap 1, opp_overlap 1436908 1436909 ACCCGCCGATGAAAA CCGGCTGGCGG AGATTG CCGCC-GCCTG GACGGATTATTTGCA ycjX 1436343 - 1437746 + | putative ATP-binding protein ycjF 1437743 - 1438804 + | hypothetical protein tyrR 1438952 - 1440493 + | transcriptional regulatory protein TERM 1927 1440524 - 1440501 - T 100 -13.2 -5.70829 | opp_overlap 1440501 1440504 AAGAGTAGAAAAAAA GAAGGCCTCC GGAT AGAGGCCTTC TTGTGACAAAAGAGC TERM 1928 1440501 - 1440524 + T 81 -12.5 -3.28712 | opp_overlap 1440501, overlap 1440504 AAGAGTAGAAAAAAA GAAGGCCTC CGGATA GAGGCCTTC TTGTGACAAAAGAGC TERM 1929 1440504 - 1440521 + T 72 -8.4 -3.78934 | opp_overlap 1440501, overlap 1440501 AGTAGAAAAAAAGAA GGCCTC CGGATA GAGGCC TTCTTGTGACAAAAG TERM 1930 1440567 - 1440582 + T 77 -10.4 -3.41878 | opp_overlap 1440565 1440561 1440562, overlap 1440565 ACTGACAAACGTAGC GCCAGC AGGC GCTGGC TTATGCCTTCAGGAC tpx 1441089 - 1440583 - | thiol peroxidase ycjG 1441205 - 1442170 + | putative mandelate racemase / muconate lactonizing enzyme family protein ycjI 1442873 - 1442145 - | hypothetical protein mppA 1443063 - 1444676 + | periplasmic murein peptide-binding protein MppA SEN1355 1445702 - 1444773 - | putative oxidoreductase TERM 1931 1446413 - 1446432 + G 76 -2.7 -5.03314 | opp_overlap 1446384 1446382 ACCTGAACCACCGCA CCGGGCG TACCAC CGACTGG TTTTTTACGCGTGAG SEN1356 1445821 - 1446726 + | putative transcriptional regulator SEN1357 1447002 - 1447871 + | putative oxidoreductase TERM 1932 1447911 - 1447947 + T 80 -12.4 -3.05963 | opp_overlap 1447906 1447916, overlap 1447914 CGCATGAACAGCTTC TAACACGGTTGCCG GAGCGTAGA CGGCAACCGTGTGA TATTCGCCTGGCCGT TERM 1933 1447914 - 1447944 + T 83 -14.1 -2.75074 | opp_overlap 1447906 1447916, overlap 1447911 ATGAACAGCTTCTAA CACGGTTGCCG GAGCGTAGA CGGCAACCGTG TGATATTCGCCTGGC TERM 1934 1447942 - 1447916 - T 75 -10.9 -3.04248 | opp_overlap 1447914 1447911, overlap 1447906 GAACAGCTTCTAACA CGGTTGCCG GAGCGTAGA CGGCAACCG TGTGATATTCGCCTG SEN1358 1448675 - 1447962 - | putative oxidoreductase TERM 1935 1448207 - 1448225 + g 70 -8.8 -3.72893 | opp_overlap 1448189 1448188, overlap 1448208 1448210 GGGCCAGGCCGCGCG CCAGCCCT TGC AGGGCTGA TTTACTGGCGGCGTA TERM 1936 1448208 - 1448224 + g 72 -12.3 -2.83522 | opp_overlap 1448189 1448188, overlap 1448207 1448210 GGCCAGGCCGCGCGC CAGCCCT TGC AGGGCTG ATTTACTGGCGGCGT SEN1359 1448753 - 1449343 + | putative transcriptional regulator TERM 1937 1449375 - 1449361 - f 73 -2.1 -5.15634 | overlap 1449362 CAGCGCATCAAAAAA CCTGA GCCAG TCAGA TACGGACAAACAGGG SEN1360 1449472 - 1449708 + | putative lipoprotein SEN1360A 1451034 - 1449922 - | hypothetical protein TERM 1938 1450225 - 1450251 + g 73 -5.3 -4.63107 | gap 1, overlap 1450223 GTTTCGCGAAAAGGT GTTAAGC-ACTG CCTT CAGTCGTTTAAC TTTTGCTTCTTTACT TERM 1939 1450612 - 1450600 - G 84 -6.3 -5.02074 | opp_overlap 1450599 1450600 TGAGCGGGTAAAAAA GAGAT TGA ATCTC ACTTTGTTCTGCAAT TERM 1940 1450954 - 1450934 - G 75 -3.9 -4.84527 | opp_overlap 1450936, overlap 1450936 GCGATATACGAAAAA CACGCTACC ATT GCTAGCGTT GTGTTTCTGATGGTT SEN1361 1452280 - 1451423 - | putative transcriptional regulator SEN1362 1452574 - 1453419 + | putative lipoprotein TERM 1941 1453474 - 1453454 - f 73 -11.1 -2.64322 | overlap 1453453 1453451 ATCTTATTTAAATAC TCCCTCTGC CAG GCAGGGGGA TATAGCAGGAGACAA TERM 1942 1455145 - 1455177 + G 71 -4.2 -4.57073 | gap 1, overlap 1455148 1455161 AAGCGCAGCCAGACA GCAT-TGCGCAGAAG GTCA CTTCTGTGGAGGTGC TTTTTACGCCGGGTA SEN1363 1453494 - 1455476 + | invasin-like protein SEN1364 1455503 - 1456327 + | hypothetical protein SEN1365 1456426 - 1456983 + | putative thiol peroxidase SEN1365A 1457455 - 1457090 - | hypothetical protein SEN1366 1458142 - 1457456 - | hypothetical protein TERM 1943 1458002 - 1458014 + g 70 -9.1 -3.64488 | opp_overlap 1458001, overlap 1458000 TTGGCCGTTAATTAC GGCCT GAC AGGCC TCTTTTAGCGCGATT TERM 1944 1458211 - 1458198 - g 79 -3.1 -5.2189 | overlap 1458187 CCAATGACCAAAAAA GTCAA CTTA TCGAC CACGACGGGCGCCGA TERM 1945 1458411 - 1458421 + G 75 -6.8 -4.38712 | overlap 1458392 GCGGCAATGGGAGTG TCCG TGG CGGA TTTTGTCAACGTCGC SEN1367 1458186 - 1458788 + | conserved hypothetical DNA-binding protein TERM 1946 1458826 - 1458867 + T 100 -13.1 -5.18371 | gap 1, opp_overlap 1458829, overlap 1458831 1458832 CGTCATCCGGACAGG GAAGCCTCGGTGCCCGATAA GCG TTATCGGGCACCG-GCTATC TTTTATTTTGTCGCA TERM 1947 1458863 - 1458829 - T 90 -14.5 -3.12668 | gap 2, opp_overlap 1458826 1458831 1458832 CATCCGGACAGGGAA GCCTCGGTGCCCGATAA GCG TTATCGGGCACC--GGC TATCTTTTATTTTGT TERM 1948 1458831 - 1458863 + T 100 -17.1 -3.67607 | opp_overlap 1458829, overlap 1458826 1458832 TCCGGACAGGGAAGC CTCGGTGCCCGATAA GCG TTATCGGGCACCGGC TATCTTTTATTTTGT TERM 1949 1458832 - 1458862 + T 100 -20.6 -2.78124 | opp_overlap 1458829, overlap 1458831 1458826 CCGGACAGGGAAGCC TCGGTGCCCGATAA GCG TTATCGGGCACCGG CTATCTTTTATTTTG ynaI 1459901 - 1458870 - | hypothetical protein ynaJ 1460140 - 1460394 + | hypothetical protein ydaA 1461396 - 1460449 - | hypothetical protein fnr 1462299 - 1461547 - | fumarate and nitrate reduction regulatory protein TERM 1950 1461583 - 1461595 + g 80 -9.1 -4.21908 | overlap 1461572 1461593 ACCGGCGAGGGCCGC CAGCG CAT CGCTG TTTTCAATAGTAATA TERM 1951 1462134 - 1462150 + g 78 -6.5 -4.62783 | CTTTAAACAGAGTTT GCCCTTT CTG AATGGGC TTTTTGCGCTCGATG ogt 1463009 - 1462494 - | O6-methylguanine-DNA-alkyltransferase ydaL 1463267 - 1463830 + | hypothetical protein SEN1374 1464241 - 1465395 + | putative chemo-receptor protein TERM 1952 1465413 - 1465431 + F 88 -7.4 -5.03145 | overlap 1465377 ATACATGTTTGGTAA GCGCCT GTTGCTA AGGCGC TTTTTTCGCACGTTC SEN1375 1465541 - 1466524 + | putative membrane transport protein TERM 1953 1466714 - 1466733 + F 100 -7.1 -5.83822 | ATTGATTCGTACGAC GCCGGCT TAGATT AGTCGGC TTTTTTTTGCCTGTA TERM 1954 1467047 - 1467076 + G 91 -15.1 -3.08813 | AATGTTTTGCCCGCC GCCCAGCTCAATA ACCT TACTGAGCTGGGC TATCTTGAGATGACG TERM 1955 1467110 - 1467132 + G 75 -12.8 -2.65815 | GTTCAGGCCGCAGCA TTACCCGTCA TTC TGGCGGGTAA TGATGTGCGTGTGCA TERM 1956 1467821 - 1467810 - g 71 -7.2 -3.96327 | overlap 1467811 ATGCGGTAGGACAAA GCGC GTTG GCGC TCCACGGCGATCTGG TERM 1957 1468287 - 1468263 - g 83 -10.1 -4.13014 | opp_overlap 1468267, overlap 1468267 CGGATATTGGCAAAA TTAACGTGCAT CCA ATGCACGTTTA CGTCGCCGTACGTCA TERM 1958 1468267 - 1468283 + G 76 -10.9 -3.65351 | opp_overlap 1468267 1468263 TATTGGCAAAATTAA CGTGCAT CCA ATGCACG TTTACGTCGCCGTAC TERM 1959 1468283 - 1468267 - g 76 -10.9 -3.67622 | opp_overlap 1468267, overlap 1468263 TATTGGCAAAATTAA CGTGCAT CCA ATGCACG TTTACGTCGCCGTAC dbpA 1467011 - 1468384 + | ATP-independent RNA helicase (DbpA) TERM 1960 1468388 - 1468427 + T 80 -10 -4.01381 | gap 1, opp_overlap 1468385 1468394, overlap 1468389 CTATTAAAATGATCG ATAGCATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAGA TTATTTCACTTCGAT TERM 1961 1468389 - 1468426 + T 82 -13.5 -3.00106 | gap 1, opp_overlap 1468385 1468394, overlap 1468388 TATTAAAATGATCGA TAGCATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAG ATTATTTCACTTCGA TERM 1962 1468422 - 1468394 - T 86 -14.6 -2.66008 | opp_overlap 1468389 1468388, overlap 1468385 AAATGATCGATAGCA TGGCGTCTCAGC GGAGT GCTGAGACGCCT GCAGATTATTTCACT ydaO 1469363 - 1468428 - | hypothetical protein SEN1379 1470303 - 1469680 - | putative phage encoded exodeoxyribonuclease TERM 1963 1469949 - 1469963 + g 79 -2.7 -5.1861 | overlap 1469942 1469941 CGGTGCCAGCGTCGT CGGCG CATTC CTCCG TTTTTTCGTCGTGGG TERM 1964 1470179 - 1470194 + g 83 -10.4 -3.92659 | overlap 1470169 1470164 1470174 GCAAGGCGTGCTGTG GCAGCG GCTT CGCTGC TTTCAGTTTTCCACC SEN1380 1470642 - 1470325 - | predicted phage protein SEN1381 1470948 - 1470727 - | putative phage encoded cell division inhibitor protein SEN1382 1471371 - 1471907 + | putative phage membrane protein TERM 1965 1471962 - 1471987 + T 72 -6.1 -4.24963 | overlap 1471952 CTTCTCCTTCGTCAA GGCTTTCAAAG TATT CTTCGTAAGCC TTTTCCATGATTGTG TERM 1966 1472536 - 1472521 - T 91 -7.5 -5.10933 | opp_overlap 1472521 TTAGCCAAAAGAAAA CCGCC GGGAGA GGCGG TTTGATGTGGTTGGT TERM 1967 1472521 - 1472536 + T 71 -7.5 -3.89302 | opp_overlap 1472521 TTAGCCAAAAGAAAA CCGCC GGGAGA GGCGG TTTGATGTGGTTGGT SEN1383 1473022 - 1472555 - | predicted phage protein TERM 1968 1472983 - 1473000 + g 71 -6.3 -4.25615 | overlap 1472992 CGCGTAAGCGCTGGG TAGCTTC TGGT GGAGCTA TTTCTTCACGTTTTT SEN1384 1473295 - 1473624 + | putative phage encoded DNA-binding protein TERM 1969 1473773 - 1473758 - T 77 -11.8 -2.87146 | opp_overlap 1473753 1473752, overlap 1473750 CAGAACACCAGGAGA CCGCCC GAAA GGGCGG TAGCTCCATTGCTTA SEN1385 1474340 - 1473786 - | putative phage membrane protein SEN1386 1475269 - 1474337 - | predicted phage protein TERM 1970 1474532 - 1474516 - G 84 -8.7 -4.33151 | TATCATAATTGAAAA CGACAGT CCG ACTGCCG AGCTGTAAGCTTACT TERM 1971 1474949 - 1474927 - G 70 -5.6 -4.41353 | opp_overlap 1474932, overlap 1474929 GTAGATATATTAAAA TATAACGCTC TTT GAGTGTTACA TCATAAGCAGTTGTT TERM 1972 1475029 - 1475046 + g 100 -2.1 -6.12328 | overlap 1475030 CATATTTTCCAACTT TTATATA ACCA TATATGA TTTTTTTTGTGTTAT TERM 1973 1475366 - 1475335 - H 84 -8.6 -4.62475 | opp_overlap 1475335 ATGCATAAAGGAAAA GCTACCGCAGGGCG AATT CACCCACCGATAGC TCTTAAATGATTGTT TERM 1974 1475631 - 1475581 - H 100 -12.1 -4.64844 | gap 1, opp_overlap 1475627 GGCAGATAGAGAAAA GCCCCAG-TTAACATTACGCGTCC GGCA AGACGCTTAACATTAATCTGAGGC CAATTTCATGCTTTG TERM 1975 1475725 - 1475710 - g 84 -9 -4.36411 | TATGAAGCAGCAAAA GGCGAT GTTA ATCGCC CTGATCGTCATCTGT SEN1387 1475639 - 1475851 + | regulator of hokC TERM 1976 1475885 - 1475852 - f 71 -9.5 -3.22223 | overlap 1475854 GAACCTGAGGAGTAA GAGACCTGGCGGGGA GAAA TCCCCGCCACCTCTG ACGTGTCAGGCATCC TERM 1977 1475883 - 1475854 - f 79 -12.1 -3.17229 | overlap 1475852 ACCTGAGGAGTAAGA GACCTGGCGGGGA GAAA TCCCCGCCACCTC TGACGTGTCAGGCAT TERM 1978 1475933 - 1475920 - f 71 -9.5 -3.1355 | opp_overlap 1475920 CGCACCCACACTTAA CCCGC TTCG GCGGG TTTTTTGTTACCCGT TERM 1979 1475920 - 1475933 + F 100 -9.5 -5.45652 | opp_overlap 1475920 CGCACCCACACTTAA CCCGC TTCG GCGGG TTTTTTGTTACCCGT SEN1388 1476127 - 1476312 + | predicted phage protein TERM 1980 1476466 - 1476487 + G 70 -6.5 -4.08767 | opp_overlap 1476466 TGCGCTCAGTAAAAA TCGGTGCGT GGAT ACACGCCGA TTTTAAGCGAGTACG TERM 1981 1476487 - 1476466 - g 81 -6.5 -4.72272 | opp_overlap 1476466 TGCGCTCAGTAAAAA TCGGTGCGT GGAT ACACGCCGA TTTTAAGCGAGTACG TERM 1982 1476511 - 1476523 + G 76 -3.4 -5.03715 | GAGTACGTAACTACG CGTT CCACA AACG TTTTTTCAAGCTCCT SEN1389 1476375 - 1476974 + | hypothetical protein SEN1390 1476974 - 1477264 + | putative bacteriophage protein SEN1391 1477141 - 1477797 + | hypothetical protein TERM 1983 1477816 - 1477802 - f 80 -5.8 -5.03715 | ATTATGCTTAAAAAA TCATTT GCA AAATGA GCCACAAACTGCTTC TERM 1984 1477896 - 1477911 + F 82 -7.5 -4.64846 | opp_overlap 1477896, overlap 1477891 GAACGCATTTTGAAA CCCGC CATCGT GCGGG TTTTGTCGTTTCTGC TERM 1985 1478491 - 1478477 - f 72 -8.6 -3.68619 | CTGAATGCAGTGAAA TCTGCT CTG AGCAGA GCTAAACAGCATTGT TERM 1986 1478733 - 1478754 + F 93 -7.3 -5.7946 | TCCATGTTATGATTA CCACCTC TCTCTCAT GAGGTGG TTTTTTTATTCCCGC SEN1392 1479296 - 1479544 + | predicted phage protein TERM 1987 1479548 - 1479565 + F 100 -12.7 -6.09888 | TTCAGATATTGAGCA CCGCCTC CCGT GAGGCGG TTTTTTTTATTCCGG SEN1393 1479968 - 1480363 + | putative bacteriophage protein TERM 1988 1480495 - 1480523 + G 80 -5.2 -4.96848 | gap 1, opp_overlap 1480475 CGGCACACTGAATGC GGGCCTGTGCCTG GTGA CAG-TGCTGGCCC TTTTTCTCTACCGCC SEN1394 1480457 - 1480744 + | putative prophage membrane protein SEN1395 1480741 - 1481286 + | conserved phage protein TERM 1989 1481333 - 1481356 + G 100 -9.6 -5.1861 | AATGGCGGCGAAATG GGCACTGGTA GCGA TACTGGTGCC TTTTTTACTGGTGGG TERM 1990 1481483 - 1481457 - g 100 -15.3 -4.19735 | opp_overlap 1481457 GGCCTGAAAAGTAAA TCCCCAGTTGT TGCTG ACAACTGGGGA TTTTTATAACAGCAT TERM 1991 1481457 - 1481483 + G 100 -16 -4.83169 | opp_overlap 1481457 GGCCTGAAAAGTAAA TCCCCAGTTGTT GCT GACAACTGGGGA TTTTTATAACAGCAT SEN1396 1481283 - 1481492 + | putative phage encoded exported protein SEN1399 1482132 - 1482470 + | Putative multi-drug transporter ynaF 1482954 - 1482520 - | hypothetical protein TERM 1992 1483400 - 1483381 - R 93 -13.6 -3.50047 | opp_overlap 1483381, overlap 1483374 CGTATAAATTGACAA GCCCGAAC GGAT GTTCGGGC TTTTTTTGTTTCCAG TERM 1993 1483381 - 1483400 + r 100 -13.6 -5.95539 | opp_overlap 1483381 1483374 CGTATAAATTGACAA GCCCGAAC GGAT GTTCGGGC TTTTTTTGTTTCCAG nifJ 1486960 - 1483436 - | probable pyruvate-flavodoxin oxidoreductase TERM 1994 1485963 - 1485977 + g 75 -11.4 -3.4582 | opp_overlap 1485956, overlap 1485962 AGATAAAGCGGCTCG GCCTGG GCG CCAGGC TCTTTGGTGCGATCC SEN1402 1487320 - 1487021 - | hypothetical protein SEN1403 1487347 - 1487502 + | hypothetical protein hslJ 1487956 - 1487546 - | heat shock protein (hslJ) TERM 1995 1488060 - 1488037 - R 95 -12.4 -4.13767 | overlap 1488038 GGGGTTATCCGAAAA TGCTCCCCTG AGCG CAGGGGAGCG ACAGGATTAGAACAG TERM 1996 1488059 - 1488038 - R 93 -15.9 -3.08046 | overlap 1488037 GGGTTATCCGAAAAT GCTCCCCTG AGCG CAGGGGAGC GACAGGATTAGAACA ldhA 1489056 - 1488067 - | D-lactate dehydrogenase TERM 1997 1488833 - 1488858 + g 74 -2.4 -5.09173 | opp_overlap 1488837, overlap 1488830 TTAAATCCGGCGCAA CGCAGCGCGA TGTATT TCACGCCGTG TTTTTTCAGCTCTTC TERM 1998 1488930 - 1488944 + g 70 -5.6 -4.4715 | overlap 1488931 CTGCTTCACATCCAT TGGCGG TTT TCGCCG TTTTCTCGGTTAGCA TERM 1999 1491164 - 1491153 - g 74 -7.2 -4.07885 | overlap 1491154 CACGGCGTGTTAAAA GGCG GCAG CGCC TGGATGCCGGATAAC TERM 2000 1491196 - 1491184 - g 72 -4.1 -4.77165 | overlap 1491179 TGCCGGATAACAAAA TCAAC GGC GTCGA TTTCATTCTGCCATT TERM 2001 1491831 - 1491841 + G 70 -6.8 -4.0896 | overlap 1491821 1491825 GTGTTTACGCTGTGG CGCA GTT TGCG TTTTGGCGACAATTT ydbH 1489296 - 1491932 + | hypothetical protein ynbE 1491932 - 1492123 + | putative lipoprotein ydbL 1492131 - 1492454 + | putative secreted protein SEN1409 1492597 - 1493046 + | hypothetical protein SEN1410 1493648 - 1493043 - | acyl carrier protein phosphodiesterase TERM 2002 1493595 - 1493578 - G 75 -6.3 -4.63932 | overlap 1493580 CATTGTTCAATAAAA TAGTCAG TCAA CTGACCA GACTGAGAGTACCCT hrpA 1493849 - 1497751 + | ATP-dependent helicase HrpA ydcF 1497815 - 1498615 + | hypothetical protein TERM 2003 1498646 - 1498619 - f 78 -6.2 -4.62069 | overlap 1498621 GCGTTACGCTAAAAA TCGCCCGTTTGC GAGG GTGAACGGGCAA GTGCGACCACCATCT cybB 1498732 - 1499262 + | cytochrome b561 (cytochrome b-561) TERM 2004 1499387 - 1499354 - T 78 -6.7 -4.61199 | ATTCCATACAGAAAA CGCCTGCGTCT AACCAGGACCCG TGACGCAGGCG AAGGAGGACGGGTCT SEN1414 1500195 - 1499533 - | hypothetical protein TERM 2005 1499578 - 1499563 - G 70 -6.8 -4.09243 | opp_overlap 1499563 1499561, overlap 1499565 CATAGTGGCGGAAAA TAGCGC AACG GCGCCA TGTTGCTCCAAAGTC TERM 2006 1500894 - 1500922 + r 72 -10.3 -2.87211 | overlap 1500884 CCATAGGCATTCGGT CTGCCTGATGTTC CAT GAGCGTTAGGCGG TGTATAAAGAAACGT SEN1417 1503025 - 1502345 - | putative amino acid ABC transporter SEN1418 1503753 - 1503022 - | ABC transporter ATP-binding subunit SEN1419 1504425 - 1503778 - | putative ABC amino acid transporter permease SEN1420 1505193 - 1504432 - | putative periplasmic amino acid-binding protein TERM 2007 1504635 - 1504614 - G 86 -7.3 -4.72188 | TGAAGGTAAAATAAA CCGGCTCTT CTAT AAAAGCCAG ATCAAGATTGCCATT SEN1421 1506101 - 1506445 + | hypothetical protein sseJ 1507792 - 1506566 - | salmonella translocated effector protein (SseJ) TERM 2008 1507093 - 1507073 - G 77 -3.9 -5.06816 | overlap 1507075 AGCCCCCAATAAAAA TATCGCCAG GTC CTGGTGAGA AGGGGTGTAAGATGC TERM 2009 1507091 - 1507075 - G 70 -6.5 -4.16307 | overlap 1507073 CCCCCAATAAAAATA TCGCCAG GTC CTGGTGA GAAGGGGTGTAAGAT TERM 2010 1507367 - 1507355 - G 84 -6.3 -5.00616 | GCTGTCGCCAAAAAA TACCA GTC TGGTA ATATCACCCAAAGAA TERM 2011 1507708 - 1507723 + g 70 -5.4 -4.42788 | ATAAACTTAATTCCG GAAGGC GTGC GCTTTC TTTTATCGCATTAAA TERM 2012 1508062 - 1508052 - H 75 -3.2 -5.18561 | CAAAGATCTAAAAAA GAAG CCA CTCC TGATTTTAGTGTGCT SEN1423 1508218 - 1508934 + | hypothetical protein SEN1423A 1509464 - 1509063 - | hypothetical protein TERM 2013 1509531 - 1509549 + H 75 -3.2 -5.25803 | GGTATTAAAAATCTT TCAAATAA CGC TCATTTGA TTTTTTGTCCACATT SEN1424 1509987 - 1510262 + | hypothetical protein TERM 2014 1510851 - 1510867 + G 80 -4.3 -4.98531 | opp_overlap 1510835, overlap 1510852 CGCTAAAGTGAAAGC GGGCGAC ACC GTTGCCG TTTTTGGTTTAGGCG SEN1425 1510294 - 1511412 + | alcohol dehydrogenase class III (ec 1.1.1.1) (glutathione-dependent formaldehyde dehydrogenase) (ec 1.2.1.1) (fdh) (faldh) TERM 2015 1511418 - 1511442 + F 100 -15.7 -4.5538 | opp_overlap 1511413, overlap 1511417 1511419 CGATAACTGATTCAT CCGCCAGCGGA TTT TCCGCTGGCGC TTTTCTGAATTTTCT TERM 2016 1511419 - 1511441 + F 100 -19.2 -3.31601 | opp_overlap 1511413, overlap 1511417 1511418 GATAACTGATTCATC CGCCAGCGGA TTT TCCGCTGGCG CTTTTCTGAATTTTC trg 1511581 - 1513206 + | methyl-accepting chemotaxis protein III (mcp-iii) (ribose and galactose chemoreceptor protein) TERM 2017 1513214 - 1513245 + T 100 -16.6 -4.30719 | gap 1, opp_overlap 1513210, overlap 1513210 TCCTTTAGTAAGCGT CGCGCCAGCGGGCTA TTT TAGCC-GCGGGCGCG TTTATTCTCCGACAG ydcI 1514190 - 1513267 - | putative LysR-family transcriptional regulatory protein TERM 2018 1513554 - 1513569 + g 77 -8.2 -4.07568 | GGGCTTCCGCATTCT GGCGCG GTAC CGTGCC TTTTGGCGAGACGAC TERM 2019 1513787 - 1513806 + g 75 -3.5 -4.89233 | overlap 1513788 GTATTGTTCATGGTC GCGACCT GTAACG AGGTCGA TTTTTGCTGTTGATG SEN1428 1514483 - 1515826 + | hypothetical protein TERM 2020 1516593 - 1516583 - g 81 -2.4 -5.40072 | opp_overlap 1516586 GTGGCGCTAAAAAAA GGCG TTG CGCT GGCGGAACATCTTGG TERM 2021 1516868 - 1516851 - g 78 -2.5 -5.22039 | opp_overlap 1516853 1516861, overlap 1516852 1516853 GTCAAATTCAAAAAA TGCGCCG TGAG CGGCGTG TTGGCCTGGGGTTAA SEN1429 1515875 - 1517383 + | putative esterase TERM 2022 1517715 - 1517733 + G 72 -3.8 -4.70319 | CGGAATCCGATATTG CGGATGGT AAA ATTGTCCG TTTTGATTTTGCTGG TERM 2023 1517804 - 1517782 - g 78 -6.8 -4.65895 | GGCGTTAGCGAAAAA GCCCTGGGGC GGC GCGCCGGGAC CCTTGCCGGATACGC opgD 1517603 - 1519258 + | glucans biosynthesis protein D precursor SEN1431 1519454 - 1520029 + | hypothetical protein TERM 2024 1520197 - 1520209 + T 75 -6.3 -4.44245 | TACTACTTGAGCTTG TAACC AAC GGTTA TTTTGTCCCTGATGT SEN1432 1520926 - 1520207 - | putative GntR-family regulatory protein TERM 2025 1520992 - 1521007 + r 95 -11.8 -4.15106 | opp_overlap 1520992 TCTTTTAAGAACAAA GCGCCC GGCC GGGCGC TTTTCACCGTTAATC TERM 2026 1521007 - 1520992 - R 100 -11.8 -4.44667 | opp_overlap 1520992 TCTTTTAAGAACAAA GCGCCC GGCC GGGCGC TTTTCACCGTTAATC SEN1433 1522060 - 1521017 - | putative hexonate dehydrogenase TERM 2027 1521697 - 1521681 - G 74 -3 -4.88067 | gap 1 ACGTATTCAGAAAAA CCGCCAT TCAC AT-GCGG ATTGAACTGCGCGCT TERM 2028 1521779 - 1521813 + g 76 -12.8 -2.76492 | overlap 1521778 CTCGCACTGATTGCA TGGGCTGGACGGGTTC ACC GCAACCGTCTGGCCCA CTTTCAGGTCGCTGC SEN1434 1523486 - 1522077 - | putative hexonate sugar transport protein SEN1435 1524289 - 1523522 - | putative hexonate dehydrogenase TERM 2029 1525423 - 1525411 - g 74 -7.7 -4.08767 | opp_overlap 1525413 TCGACTGGCTGAAAA TGCTG CGC CAGCA GTCTTCCACTCCGAT SEN1436 1524621 - 1525880 + | putative dehydratase TERM 2030 1525889 - 1525912 + T 72 -8.8 -3.62046 | opp_overlap 1525889 ACCGTAAGCAATGAA GGCCCGGC TTGCATCT GCCGGGTC TTATTCCCGACGTCC SEN1437 1526458 - 1526021 - | aminoglycoside 6'-N-acetyltransferase SEN1438 1527249 - 1526458 - | putative regulatory protein TERM 2031 1526872 - 1526886 + g 83 -7.2 -4.55798 | ATTAGCGATTTTGAT GTCATT GCA AATGAC TTTTACTTTGGCGTC SEN1439 1527897 - 1527265 - | putative ribulose-5-phosphate 3-epimerase SEN1440 1528346 - 1527909 - | putative phosphotransferase enzyme TERM 2032 1528449 - 1528475 + r 100 -11.6 -4.78237 | overlap 1528450 GTTATCGCTCTCTGC AGGGGATAAGCG TTT TGCTTATCCCCA TTTTATTGTCGGATA TERM 2033 1528450 - 1528474 + r 100 -15.1 -3.46219 | overlap 1528449 TTATCGCTCTCTGCA GGGGATAAGCG TTT TGCTTATCCCC ATTTTATTGTCGGAT SEN1441 1529284 - 1528478 - | hypothetical protein TERM 2034 1528538 - 1528555 + g 80 -4.7 -5.03715 | opp_overlap 1528538, overlap 1528540 1528541 CGCCTGGTCGACAAA GTTGGCG AAGA CGCCGTC TTTTTTAAACGTGGT SEN1442 1530611 - 1529298 - | putative phosphotransferase enzyme TERM 2035 1529617 - 1529607 - G 90 -4.6 -5.38047 | CATGCAGATAAAAAA CGGC GCA ACCG GTAAATCAGCCAGCG SEN1443 1530903 - 1530622 - | putative phosphotransferase enzyme TERM 2036 1530819 - 1530837 + g 74 -3 -4.86001 | overlap 1530821 CCGCAATGCCTTGCT CCGCAAGA AAG TCCTGCAG TTTTTGTGCAATCAT SEN1444 1532018 - 1530900 - | hypothetical protein rimL 1532235 - 1532774 + | ribosomal-protein-serine acetyltransferase ydcK 1533751 - 1532771 - | putative transferase TERM 2037 1533620 - 1533634 + g 79 -11.4 -3.63895 | opp_overlap 1533613 GGCATCAACCCAGCC GCCGGA GGT TCCGGC TTTAACATCGTTAAA TERM 2038 1533870 - 1533859 - g 74 -2.2 -5.06223 | overlap 1533869 ATAAATTAAACAAAA TGCG TAAT CACA AGCAGAGCGATCGCG TERM 2039 1534634 - 1534645 + G 72 -2.2 -4.86621 | ACAACCGTTTAATGC TTCC TTCT GGAG TTTTTCGTTCGGCGT tehA 1533858 - 1534871 + | tellurite resistance protein TehA tehB 1534858 - 1535454 + | tellurite resistance protein TehB TERM 2040 1535660 - 1535699 + G 87 -13.6 -3.30629 | overlap 1535657 1535661 TACTGGCTTGCTGGC GTTATCCGGCTGTGCGTC TAAA GTCACACAGCCGGATAAG TATTCTGGATTCTTA TERM 2041 1535661 - 1535698 + G 90 -17.1 -2.57654 | overlap 1535660 1535657 ACTGGCTTGCTGGCG TTATCCGGCTGTGCGTC TAAA GTCACACAGCCGGATAA GTATTCTGGATTCTT SEN1449 1535610 - 1536278 + | putative lipoprotein SEN1450 1537510 - 1536332 - | putative benzoate membrane transport protein TERM 2042 1536635 - 1536625 - G 100 -8.2 -5.72053 | opp_overlap 1536626, overlap 1536626 CAAGTAAATAAAAAA CGCC TGC GGCG GCGGCCGCTAACCAG TERM 2043 1536738 - 1536727 - G 79 -7.2 -4.42974 | overlap 1536734 TGCAGATAGAATAAA CGCC AAAT GGCG AAAGCAGCAGCGCCA TERM 2044 1536820 - 1536830 + g 77 -8.2 -4.14243 | CCTTCATTGTGGCGA CGCC GGG GGCG TTTTGCGATGCCATC ydcN 1537603 - 1538139 + | putative DNA-binding protein TERM 2045 1538277 - 1538287 + G 70 -6.8 -4.18018 | TGACGCCGCAATTGC TCGC GAA GCGA TTTTGCATGGCGCAG ydcP 1538218 - 1540182 + | putative peptidase yncJ 1540413 - 1540183 - | hypothetical protein sifB 1541637 - 1540687 - | putative virulence effector protein TERM 2046 1541727 - 1541742 + H 76 -4 -5.05505 | gap 1, overlap 1541729 CCATCGGTTTGCCTA TC-GGTG AAA CACCTGA TTTTTGCTTTGTCCT ugtL 1542174 - 1542572 + | hypothetical protein TERM 2047 1543468 - 1543456 - g 77 -4.1 -5.05577 | AAACCAAATGAAAAA CGAAT TTT ATCCG CAGGTAGAGAAAAAT pdgL 1543094 - 1543864 + | D-alanyl-D-alanine dipeptidase ydcR 1544000 - 1545424 + | putative regulatory protein ydcW 1545539 - 1546984 + | putative aldehyde dehydrogenase TERM 2048 1547067 - 1547019 - f 100 -8.8 -5.08011 | gap 1, overlap 1547021 1547022 AAAATCGTGAAAAAA TA-GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCAGCA AGTACTCAAAGGTTG TERM 2049 1547064 - 1547021 - f 100 -15.2 -4.15235 | overlap 1547019 1547022 AATCGTGAAAAAATA GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCA GCAAGTACTCAAAGG TERM 2050 1547063 - 1547022 - f 100 -18.7 -3.08056 | overlap 1547021 1547019 ATCGTGAAAAAATAG GCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGC AGCAAGTACTCAAAG TERM 2051 1547348 - 1547336 - g 79 -3.3 -5.27335 | TGCGTCAAATAAAAA GAGCA TAT TGCGC GCGTTTTTTCCTCTG ydcX 1547293 - 1547556 + | hypothetical protein TERM 2052 1547559 - 1547587 + T 72 -5.2 -4.57073 | overlap 1547560 1547563 TTCGCTTTTCTGACC TCAAGCCCGATA CAGGT TACCGGGCATGG TTTTTCCGCCAGGTC srfC 1549745 - 1547601 - | putative virulence effector protein TERM 2053 1548875 - 1548851 - G 73 -9.2 -3.82098 | opp_overlap 1548851 GAGAATCAAGCGAAA GGCTGACCGC ATTGA GCAGTCGGCC TTCCTTAACCGGATG TERM 2054 1549003 - 1549015 + g 86 -10.5 -4.16284 | GGCGCCGCCAGTTCC CCGGC ATG GCCGG TTTGTTGCAACATAT srfB 1552723 - 1549742 - | putative virulence effector protein TERM 2055 1549941 - 1549956 + g 70 -6.8 -4.11484 | CGCACATTCAGTACG CCGTCG CCAG CGATGG TTTTCGCCAGTTCGG TERM 2056 1552184 - 1552166 - G 74 -6.6 -4.23213 | GGCATACTGAAGAAA CGACTCGC GCA GCCAGCCG TCAATCCATGTCTGG srfA 1554053 - 1552728 - | putative virulence effector protein TERM 2057 1553312 - 1553302 - G 78 -2.4 -5.252 | overlap 1553304 GATGGCCAGAAAAAA GGCG TGG CGAC GGCGGCGATAACCAC TERM 2058 1553506 - 1553520 + g 73 -5.6 -4.64676 | opp_overlap 1553503 1553502 GCCTGACTAAATGCC GCCTCT ACC AGCGGC TTTTCTTCGGGCTCC ydcY 1554277 - 1554510 + | hypothetical protein TERM 2059 1554549 - 1554521 - T 72 -6.6 -4.30978 | overlap 1554522 TGTAACCCATTAAAA CTGGCGCTTCGC AATCA GCCATGCGCCAA TGACCAGCAACAGCG ydcZ 1554964 - 1554515 - | hypothetical protein TERM 2060 1554744 - 1554722 - G 100 -6.3 -5.56264 | gap 1, overlap 1554725 GGCAAATACAAAAAA TGA-CCCCAG CAGA CCGGGGATCA ATGTCCACCAGCGAA yncA 1555479 - 1554964 - | putative acetyltransferase yncB 1555658 - 1556728 + | putative NADP-dependent oxidoreductase TERM 2061 1556755 - 1556737 - f 100 -8.8 -5.63517 | TGCGTAAAGAAAAAA TGGCGGCA TTA TGTCGCCA TAAAAATGTGCAAAT TERM 2062 1557695 - 1557679 - g 71 -9.5 -3.48924 | CCACTGCCTACAGAA CGTTTTG CAA CAAAACG TAGCGACGATTAAAA yncC 1557062 - 1557727 + | putative regulatory protein TERM 2063 1557775 - 1557749 - T 100 -15.2 -3.26473 | opp_overlap 1557745 1557742 1557755, overlap 1557750 1557753 TGAAACTATGACTAA TCAATAGCGGGG ATG CCCCGCTATTGC CGGATATTTATTCAA TERM 2064 1557774 - 1557750 - T 100 -18.7 -2.55402 | opp_overlap 1557745 1557742 1557755, overlap 1557749 1557753 GAAACTATGACTAAT CAATAGCGGGG ATG CCCCGCTATTG CCGGATATTTATTCA TERM 2065 1557771 - 1557753 - T 93 -14.6 -3.41961 | opp_overlap 1557745 1557742 1557755, overlap 1557750 1557749 ACTATGACTAATCAA TAGCGGGG ATG CCCCGCTA TTGCCGGATATTTAT TERM 2066 1557755 - 1557769 + T 80 -12.8 -3.04515 | opp_overlap 1557753 1557750 1557749, overlap 1557745 1557742 TATGACTAATCAATA GCGGGG ATG CCCCGC TATTGCCGGATATTT yncD 1559888 - 1557783 - | probable TonB-dependent receptor YncD precursor TERM 2067 1558236 - 1558252 + g 74 -7.2 -4.10855 | overlap 1558237 1558245 1558249 GTCCAACGCGAGCTC TGCGCC CTGGC GGCGCG TTTTGCCCGCGTTTT TERM 2068 1558249 - 1558263 + g 77 -4.2 -4.88736 | overlap 1558237 1558236 1558245 TCTGCGCCCTGGCGG CGCG TTTTGCC CGCG TTTTTGTAGGTAGTG TERM 2069 1558915 - 1558928 + g 81 -8.1 -4.2349 | AGTGTAATTACGCCG CCAGC CTGG GCTGG TTTTAGCTGTGCCAC TERM 2070 1559214 - 1559229 + g 82 -5.4 -5.00616 | overlap 1559216 AAGGCGCACGCCCAG TTTGGC ATTA GCCAGA TTTTTTCGCGCGCCG TERM 2071 1560176 - 1560189 + G 71 -5.9 -4.33582 | overlap 1560174 CGTCATCTTTTTTCG CCGCG CCTG CGTGG TTCTTTATTGTTAGG SEN1469 1560152 - 1561213 + | possible ATP-binding protein SEN1470 1561358 - 1561579 + | putative lipoprotein TERM 2072 1561644 - 1561621 - T 100 -14.6 -3.74747 | gap 1 GCAACGCGCATTAAA CCCGGCAGGCC TGG GGC-TGCCGGG GAAGGGGAATGTTAT ansP 1563149 - 1561656 - | L-asparagine permease SEN1472 1563662 - 1564294 + | hypothetical protein TERM 2073 1564389 - 1564355 - f 82 -7.8 -4.56775 | opp_overlap 1564343 1564341, overlap 1564363 AGCCGGCGTTAAAAA TTTTAACACGCCGCTA TTT TGGCGGCGTGTCGCAA AGAGATTCTCAGAAC TERM 2074 1564381 - 1564363 - f 74 -10.2 -3.17553 | opp_overlap 1564343 1564341, overlap 1564355 TTAAAAATTTTAACA CGCCGCTA TTT TGGCGGCG TGTCGCAAAGAGATT TERM 2075 1564448 - 1564462 + F 74 -5.7 -4.61482 | overlap 1564440 1564443 ACGTACCTCCGGCGC GACAG CCGGC CTGTC TTATTTTTTCAAAAG nhoA 1564577 - 1565422 + | N-hydroxyarylamine O-acetyltransferase yddE 1566351 - 1565458 - | hypothetical protein TERM 2076 1565777 - 1565767 - G 90 -4.6 -5.37593 | opp_overlap 1565776 CTGGAAAGGAAAAAA GCCG TTA CAGC CAATTTGCTGGCTGA TERM 2077 1566383 - 1566416 + r 79 -2.9 -5.27335 | opp_overlap 1566384, overlap 1566384 CTGAAGAATCATCAT AGCCTGTGCGTTGCC GAAT GACGACGCCCAGACG TTTTTCTTTGCCCGG narV 1567137 - 1566457 - | respiratory nitrate reductase 2 gamma chain narW 1567829 - 1567134 - | respiratory nitrate reductase 2 delta chain narY 1569373 - 1567829 - | respiratory nitrate reductase 2 beta chain TERM 2078 1568407 - 1568417 + g 70 -6.8 -4.09685 | GCGACCGTTGGGCAG CGTC GAT GACG TTTTGCGGGATGCCC TERM 2079 1569197 - 1569209 + g 71 -4.8 -4.62069 | GCCTTGCCACTCCTG CTGG TCTTC CCAG TTTTTGGGATAGCCG TERM 2080 1569276 - 1569290 + g 73 -5.6 -4.59773 | TATTCCATCCCTTCA CGTCCG GTC CAGACG TTTTTACAGGTGACG narZ 1573110 - 1569370 - | respiratory nitrate reductase 2 alpha chain TERM 2081 1570062 - 1570091 + g 84 -13.7 -3.08776 | gap 1, overlap 1570058 AAGAGACATGCTCGC TTTCCAGCCCTGAC CAG GTC-GGGCTGGAGA TAATTTTGCGCGGTT TERM 2082 1572604 - 1572618 + g 74 -10 -3.66178 | opp_overlap 1572606 GTTAGCAGCGGCAAT GAGCTG ATT CAGCTC TTTCCAGTTCGAACG TERM 2083 1572824 - 1572843 + g 100 -16.4 -3.2827 | CATGAGTAGCTGGCG CCGCGCGG GCAG CCGCGCGG TTCATGGTTCGGTAA narU 1574590 - 1573202 - | nitrite extrusion protein TERM 2084 1573410 - 1573377 - G 73 -5.1 -4.54449 | gap 1, overlap 1573378 ATAGCGGAGATAAAA CCGAGCGCGGCGGCGG TAT CCGTCACCGCT-TCGC GCTGCGCCTGCTCAT TERM 2085 1574642 - 1574656 + r 73 -7.8 -4.12599 | opp_overlap 1574638 1574640 1574642 CACAAAAAAGAGACA GAGCGT CAC GCGCTC TTTTGAGAACTTATT SEN1480 1575383 - 1574805 - | putative regulatory protein TERM 2086 1576669 - 1576653 - g 93 -9.3 -4.82901 | GCGCCGGCAGAAAAA GCGGCGG CGG CCGGCGC GATAGAAACGATGGC smvA 1575501 - 1576988 + | methyl viologen resistance protein SmvA SEN1482 1577453 - 1577013 - | hypothetical protein TERM 2087 1577493 - 1577513 + r 91 -11.1 -4.19624 | opp_overlap 1577493 ACATCAAGAGAAAAA GCCAGCCCT GAA AGGACTGGC TTTGTATTCAGACTA TERM 2088 1577513 - 1577493 - R 100 -13.3 -5.13344 | opp_overlap 1577493 ACATCAAGAGAAAAA GCCAGCCCT GAA AGGACTGGC TTTGTATTCAGACTA nmpC 1578625 - 1577537 - | outer membrane porin protein (ompD) TERM 2089 1578082 - 1578095 + g 71 -4.5 -4.63527 | gap 1, overlap 1578076 1578072 CGTTAGACTCGTACG CG-CCG TCA CGGTCG TTTTTGCCCTGGTAC yddG 1579972 - 1579148 - | putative integral membrane protein fdnG 1580307 - 1583354 + | formate dehydrogenase, nitrate-inducible, major subunit (ec 1.2.1.2) (formate dehydrogenase-n alpha subunit) (fdh-n alpha subunit) (anaerobic formate dehydrogenase major subunit) TERM 2090 1583446 - 1583412 - g 74 -7.9 -4.15222 | gap 1, opp_overlap 1583420, overlap 1583413 ACGGTCCGCAACAAA CGCCATCACGCCGCCT CCGC AGGCG-CGTGATTACA AAGCCGAAGTCGCGA TERM 2091 1584170 - 1584130 - g 77 -11.2 -3.55801 | gap 1, opp_overlap 1584121 1584130 1584147, overlap 1584142 ATCAATCTGTGGAAA GGGGCGCTAAAA-CCGCTG GCCG CAGCGGGCTTTATCGCCAC TTTCGCCGGTCTGAT TERM 2092 1584157 - 1584142 - g 86 -10.4 -4.0896 | opp_overlap 1584130 1584121 1584147, overlap 1584130 AAAGGGGCGCTAAAA CCGCTG GCCG CAGCGG GCTTTATCGCCACTT fdnH 1583368 - 1584252 + | formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (formate dehydrogenase-n beta subunit) (fdh-n beta subunit) (anaerobic formate dehydrogenase iron-sulfur subunit) fdnI 1584245 - 1584901 + | formate dehydrogenase, nitrate-inducible, cytochrome b556(fdn) subunit (formate dehydrogenase-n gamma subunit) (fdh-n gamma subunit) (anaerobic formate dehydrogenase cytochrome b556 subunit) TERM 2093 1584915 - 1584953 + T 87 -14.9 -2.91511 | gap 1, opp_overlap 1584922 1584925, overlap 1584922 AATTCTTTCGCAATC TGATAAACAAGGCGCTAT CCTG GTAGCGCCTTGTTT-TCA TCTGCTGTCTGTATA TERM 2094 1584947 - 1584922 - T 95 -13.4 -3.92522 | opp_overlap 1584915 1584922, overlap 1584925 TCGCAATCTGATAAA CAAGGCGCTA TCCTGG TAGCGCCTTG TTTTCATCTGCTGTC TERM 2095 1584922 - 1584947 + T 100 -14.1 -4.38171 | opp_overlap 1584922 1584925, overlap 1584915 TCGCAATCTGATAAA CAAGGCGCTAT CCTG GTAGCGCCTTG TTTTCATCTGCTGTC TERM 2096 1584944 - 1584925 - T 79 -9.3 -4.08948 | opp_overlap 1584922 1584915, overlap 1584922 CAATCTGATAAACAA GGCGCTA TCCTGG TAGCGCC TTGTTTTCATCTGCT adhP 1585921 - 1584992 - | alcohol dehydrogenase TERM 2097 1585306 - 1585326 + g 79 -3.2 -5.14563 | gap 1, opp_overlap 1585306 CGACCGCGGTAACCA CCGCT-GCG TGCG CGCCACCGG TTTTTTCCTGCACAA TERM 2098 1585769 - 1585751 - G 85 -8.8 -4.37886 | opp_overlap 1585761 1585761, overlap 1585752 GCATCCTTCATAAAA CCACGCGA CAC TCGCGCGA TCGCCGGGTTTCAGC TERM 2099 1585843 - 1585868 + g 75 -6.1 -4.64766 | CGTGTCCCAGAATGA CGCCGGTTTTG TCAC CGAAATCGCCG TTTTTCACGTGTAGA TERM 2100 1586039 - 1586065 + r 73 -9.6 -3.41936 | opp_overlap 1586039 1586044 1586049, overlap 1586037 GTGAACTGCATAGCA GGTAATAGCA GGTAAGG TGCTATTACC TCTTTAGGATTAATA TERM 2101 1586281 - 1586251 - R 74 -3.9 -5.03961 | gap 1, opp_overlap 1586251, overlap 1586252 1586254 AACTAAAGAAGAAAA TGATATCCGGCGGC ATTC ACCGCCGGGTA-CG TATTAAATGGAAGTC TERM 2102 1586279 - 1586254 - R 79 -11.1 -3.35275 | opp_overlap 1586251, overlap 1586252 1586251 TAAAGAAGAAAATGA TATCCGGCGGC ATTC ACCGCCGGGTA CGTATTAAATGGAAG sfcA 1587981 - 1586284 - | NAD-linked malic enzyme; malate oxidoreductase TERM 2103 1587001 - 1586988 - G 72 -2.3 -4.9218 | opp_overlap 1586993 GATCGACCATAAAAA CGTTC TGTC GAGCG GCATCTTCGCTTAAA TERM 2104 1588131 - 1588110 - R 100 -13.1 -5.38054 | opp_overlap 1588110 1588127 TCCTATAAACAAAAA CACCATTGC AGAT GCAATGGTG TTTAACGTCATTTCA TERM 2105 1588110 - 1588131 + r 90 -13.1 -3.65353 | opp_overlap 1588110, overlap 1588127 TCCTATAAACAAAAA CACCATTGC AGAT GCAATGGTG TTTAACGTCATTTCA rpsV 1588301 - 1588158 - | 30S ribosomal protein S22 yddX 1588611 - 1588396 - | hypothetical protein osmC 1589124 - 1589555 + | osmotically inducible protein C TERM 2106 1589669 - 1589689 + F 83 -13.3 -3.27951 | overlap 1589667 1589672 CTATCACCTCAACGC GCCGTAGAC CAC GTCTGCGGC TATTGTCGTGGCCTA SEN1493 1589905 - 1590234 + | putative secreted protein TERM 2107 1590254 - 1590271 + F 75 -6.2 -4.53036 | opp_overlap 1590246 1590254, overlap 1590249 AAACTGATATCAAAA CCCGGC CTGTGT GTCGGG TTTTACTATTTGTGA TERM 2108 1590763 - 1590746 - g 95 -6.3 -5.31275 | gap 1, overlap 1590748 CCCGAGGAGAAAAAA CT-GTGGC ACA GCCACCAG TACGAGGTGAAATCC SEN1494 1590377 - 1591162 + | exported protein TERM 2109 1592439 - 1592420 - g 71 -4.3 -4.56597 | gap 1, opp_overlap 1592420 1592426, overlap 1592421 1592423 CTCGCGGCGTAAAAA GTACCGGA CAACC TCCGGT-C GCCTTTGTGGATTTT TERM 2110 1592587 - 1592614 + G 100 -7 -5.77853 | CTGCTTTTTATGGGC GAAGAGTATGGC GAAA GCCGTCCTTTTC TTTTTTTTACCGATT SEN1495 1591291 - 1593075 + | putative hydrolase TERM 2111 1593376 - 1593365 - g 74 -7.2 -4.07885 | opp_overlap 1593374 CAGCTCGCTGGAAAA CGCC TGGT GGCG CGACGTGCTTGAATA TERM 2112 1593433 - 1593454 + G 77 -3.5 -5.00616 | overlap 1593437 ATTTCGATATTGACT GGTCGCGCC GACT GACGCTGCC TTTTTTAGGCGACAC TERM 2113 1593763 - 1593751 - g 73 -5.5 -4.66537 | opp_overlap 1593759, overlap 1593752 GGGTGGAAGATAAAA CCGTC TTC GACGA TACACATCGGCTGAT TERM 2114 1593931 - 1593913 - g 80 -4.5 -5.02074 | opp_overlap 1593913, overlap 1593915 TCACCGTGGAAAAAA TTCTCGC TAAAG GCGAGCA ACTTCCTGATGACTG SEN1496 1593072 - 1595600 + | putative hydrolase SEN1497 1595657 - 1597732 + | putative glycogen debranching protein TERM 2115 1597758 - 1597774 + T 100 -10.8 -5.14965 | opp_overlap 1597758 GCGCTCCGGACCCAA CCGGCC TTGAT GGCCGG TTTTTTACTGGCGCT TERM 2116 1597774 - 1597758 - T 73 -10.8 -3.05384 | opp_overlap 1597758 GCGCTCCGGACCCAA CCGGCC TTGAT GGCCGG TTTTTTACTGGCGCT SEN1498 1599047 - 1597845 - | putative aminotransferase TERM 2117 1598921 - 1598898 - G 76 -11.8 -3.05596 | gap 1 GATTCGCTGATGCAA TG-CCGCCTGA ACC TCAGGCGGGCA GGCAAAATCGAAATC SEN1499 1600511 - 1599060 - | putative Na+/H+ antiporter SEN1500 1601662 - 1600655 - | putative LacI-family transcriptional regulator TERM 2118 1601636 - 1601648 + g 77 -7.7 -4.31433 | TGATACACCGGCCAT GGATG CAA CATCC TTTATTGTCGCCATG TERM 2119 1602206 - 1602222 + r 100 -10.1 -5.64274 | opp_overlap 1602206 AACCTGCGCGACGAA CCGGTCA CAG TGGCCGG TTTTTTTATGCCTGC TERM 2120 1602326 - 1602340 + r 72 -2.8 -5.0538 | opp_overlap 1602326 AGGGAAGGGATCAAA CTTATG GGC CAGAAG TTTTTTGACATACAC SEN1501 1602795 - 1602463 - | hypothetical protein TERM 2121 1602702 - 1602714 + g 72 -4.1 -4.81306 | overlap 1602703 CTGAATCCAAATCTG TTGAC GGT GTCAG TTCTTTTTTCTTAAA TERM 2122 1603303 - 1603334 + r 93 -10.4 -4.72497 | gap 1, opp_overlap 1603308, overlap 1603308 GATGCTTATTCTCGG TAAAACCGGTAGCAT TAT GTG-TACCGGTTTTA TTTTATTCATCCCTA TERM 2123 1603308 - 1603329 + r 85 -5.9 -5.28831 | gap 1, opp_overlap 1603308, overlap 1603303 TTATTCTCGGTAAAA CCGGTAGCAT TAT GTG-TACCGG TTTTATTTTATTCAT SEN1504 1604420 - 1603347 - | putative isomerase TERM 2124 1604263 - 1604233 - G 74 -7.8 -4.08216 | opp_overlap 1604233, overlap 1604221 GTACTGTCGTTAAAA CAGATTACATCA CCTTCTT TGATATAATCTG TTAATTTACTAAAGT TERM 2125 1604580 - 1604601 + r 73 -2.1 -5.19998 | TACCGATATTAGCCT GGACGATCG GATT TGACCGCCC TTTTCTTTTGCTTAT SEN1505 1605101 - 1604613 - | putative regulatory protein TERM 2126 1605070 - 1605084 + g 100 -5 -5.54907 | opp_overlap 1605070 ATTTGCTCGGAAATA TGTGTA TCT TGCACA TTTTTATTTTCTGAC SEN1506 1605146 - 1606654 + | putative monooxygenase TERM 2127 1606754 - 1606774 + G 72 -2.5 -4.96848 | overlap 1606740 CGCCGCCAGTACAGC GGCTGTA ATGTCGG TACTGCC TTTTTATATCCGCGA SEN1507 1606644 - 1607885 + | putative multidrug efflux protein TERM 2128 1608522 - 1608510 - g 84 -3.3 -5.32882 | CAGGATGATAAAAAA CCACT GAA AGAGG ACGAGAGCGTTTCCC pqaA 1607955 - 1609511 + | conserved hypothetical protein, phoPQ-regulated TERM 2129 1609571 - 1609542 - f 95 -13.1 -3.9392 | opp_overlap 1609541 TCTGAGTTTAAATAA TTTTATCCATCAC GCTT GCGATGGATAAAA ATCCTCTGCGATAAA TERM 2130 1609675 - 1609647 - f 87 -9.8 -4.26634 | gap 1 AAAATAACCTTAAAA TATTGTGGTC-AG GCCG CTAGACCACAATA AGAGGATTAATCATG SEN1509 1609688 - 1610974 + | membrane transport protein TERM 2131 1611764 - 1611751 - gT 77 -8.1 -4.07678 | overlap 1611744 GGCCAAAACAGGAAA CGTCG CTGC CGACG AACCTGATCACCTAT SEN1510 1610949 - 1611974 + | putative alcohol dehydrogenase TERM 2132 1611989 - 1612016 + T 95 -13.5 -3.90744 | overlap 1611991 ATTTACGGCGAGTTC TACCGCATGGC ATATCC GCCATGCGGTG TTATTTACCGACAAA TERM 2133 1611991 - 1612014 + T 93 -13.9 -3.54488 | overlap 1611989 TTACGGCGAGTTCTA CCGCATGGC ATATCC GCCATGCGG TGTTATTTACCGACA SEN1511 1612824 - 1612033 - | putative regulatory protein TERM 2134 1612365 - 1612384 + g 70 -5 -4.38712 | overlap 1612363 1612366 TCGCCTCTATTTGGT TGATGACG TCAA CGTTATCG TTTTGTGCGGCTAAG SEN1512 1613961 - 1612870 - | putative secreted hydrolase TERM 2135 1613128 - 1613158 + g 75 -11.8 -2.98719 | TGCAAGCGTATTCAT TGCGTCGTGGGCGG ATG TCGCTTGCGGCGCA TATGTGGTGTAATAA TERM 2136 1613467 - 1613449 - G 76 -8.9 -3.922 | AAACGCGTAATGAAA TGGCGAT TTCAG ATCGCCA AACCGATGCAGTTCC TERM 2137 1613553 - 1613540 - G 71 -5.9 -4.33274 | opp_overlap 1613540 1613541, overlap 1613541 CCGACAGTAGCAAAA CGGGC CAGC GCCCA TTCTCCCAACGAGGT TERM 2138 1613754 - 1613765 + g 91 -3.6 -5.61596 | overlap 1613752 AGCTTATCCCCTGGC TGCC ATCC GGCG TTTTTTTATCAAACT TERM 2139 1614615 - 1614629 + G 73 -5.7 -4.45517 | GCTCTGCGCACCCGT TGGCA AAAGA TGCCA TTTTGTCGCTCATTT TERM 2140 1614835 - 1614824 - g 77 -7.2 -4.3208 | opp_overlap 1614824, overlap 1614825 CTGGAGAAGTTAAAA CGCG TCAG CGCG GATGCTAAAGCGATT hyaA 1614389 - 1615492 + | uptake hydrogenase small subunit TERM 2141 1616311 - 1616293 - gf 72 -3.8 -4.68593 | opp_overlap 1616298 TCCATCATCCAAAAA GCTCGC CAGTTCT GCGAAC AGGTTTATCTTCCGG TERM 2142 1616298 - 1616314 + GF 70 -6.5 -4.1891 | opp_overlap 1616293 CATCCAAAAAGCTCG CCAGTTC TGC GAACAGG TTTATCTTCCGGACG hyaB 1615495 - 1617297 + | uptake hydrogenase-1 large subunit TERM 2143 1617631 - 1617651 + GF 100 -7.6 -5.14563 | CTGGCGCAAAGGCGT TATCAGCG AAATC CGCTGGTA TTTTTTCCTCGAAAA hyaC 1617248 - 1617991 + | Ni/Fe-hydrogenase 1 b-type cytochrome subunit hyaD 1617997 - 1618605 + | hydrogenase 1 maturation protease SEN1517 1618605 - 1618904 + | hydrogenase isoenzymes formation protein hyaE 1618901 - 1619311 + | hydrogenase-1 operon protein hyaF 1619329 - 1620390 + | hydrogenase-1 operon protein SEN1520 1620378 - 1621265 + | putative ATP/GTP-binding protein SEN1521 1621278 - 1621619 + | hydrogenase nickel incorporation protein (HypA) TERM 2144 1621658 - 1621642 - T 100 -10.1 -5.49234 | ATAGGCAATAAAAAA GGACGCC AGA AGCGTCC TGAAATAATAAAAGA SEN1522 1622878 - 1621760 - | outer membrane protein TERM 2145 1621812 - 1621825 + g 70 -6.7 -4.11751 | TCTGTATTAGGATTC GATGG GTTG CCATC TTTTAGCAGATTGAT SEN1523 1623595 - 1624137 + | hypothetical protein TERM 2146 1624157 - 1624179 + T 73 -10.6 -3.01924 | TGCTCTTCAGGTTAT GGCGCAGA TGAACAT TCTGCGCC TGTTAAGACAAACTC SEN1524 1625140 - 1624193 - | hypothetical protein yneG 1625721 - 1625362 - | hypothetical protein TERM 2147 1625687 - 1625666 - G 86 -10.1 -4.3467 | overlap 1625677 ATCCCGAGACGAAAA CGCGAACGA AATG TCGATCGCG CCAGGCGGGCAAAGA yneH 1626647 - 1625721 - | probable glutaminase yneI 1628108 - 1626720 - | putative oxidoreductase yneJ 1628211 - 1629083 + | putative regulatory protein TERM 2148 1629695 - 1629705 + G 74 -2.4 -5.0538 | GTCAGTATTTTGGCT GGCG CAC CACC TTTTTTGCCATCGGC ydeA 1629199 - 1630389 + | putative membrane transport protein TERM 2149 1630431 - 1630390 - T 77 -10.9 -3.20367 | opp_overlap 1630390 1630402, overlap 1630392 1630394 GAACAACCGCATTAA GACATTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAAAATG CGCCTTAGTGGTACG TERM 2150 1630429 - 1630392 - T 83 -13.5 -3.15841 | opp_overlap 1630390 1630402, overlap 1630390 1630394 ACAACCGCATTAAGA CATTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAAAA TGCGCCTTAGTGGTA TERM 2151 1630427 - 1630394 - T 100 -18.3 -3.13639 | opp_overlap 1630390 1630402, overlap 1630392 1630390 AACCGCATTAAGACA TTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAA AATGCGCCTTAGTGG marC 1631101 - 1630436 - | hypothetical protein marR 1631360 - 1631794 + | multiple antibiotic resistance protein MarR marA 1631808 - 1632197 + | multiple antibiotic resistance protein MarA marB 1632226 - 1632441 + | multiple antibiotic resistance protein MarB TERM 2152 1632448 - 1632466 + T 100 -12.4 -5.52986 | CACCTTTAACCTCTT TGCCCCGT TTT GCGGGGCA TTTTTTTAGTACCGT ydeD 1633462 - 1632560 - | hypothetical protein TERM 2153 1634523 - 1634535 + G 79 -3.3 -5.24129 | TCGACCAATGATGAC GACCG GCA CCGTC TTTTTTATCGCCGGG ydeE 1633690 - 1634877 + | hypothetical protein TERM 2154 1635246 - 1635280 + T 100 -16.5 -4.55287 | gap 1, opp_overlap 1635235 1635234, overlap 1635247 TAATCCCTCGCAGAG CCGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCGC TTTTGTCTGGATGGC TERM 2155 1635247 - 1635279 + T 100 -20 -3.3269 | gap 1, opp_overlap 1635235 1635234, overlap 1635246 AATCCCTCGCAGAGC CGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCG CTTTTGTCTGGATGG TERM 2156 1635326 - 1635309 - T 100 -10.5 -6.11644 | opp_overlap 1635316 GCAGGCAAAAAAAAA CCGCCGG TTCA CCAGCGG TAAATGCTTGCATGG ydeI 1635960 - 1635568 - | putative periplasmic protein TERM 2157 1635858 - 1635879 + g 85 -2.1 -5.52384 | opp_overlap 1635842, overlap 1635864 CATCCTCAATAGCAT GAGGCGGCG GCGG TGCCACGTC TTTTTTTAATCCCCC ydeJ 1636388 - 1636915 + | hypothetical protein TERM 2158 1636983 - 1637001 + T 71 -10.2 -2.69977 | opp_overlap 1636983, overlap 1636980 GTCAGAATAAAAAAA TGCGAGCC TAT GGCCCGCA TCGTATGTGCAATAT TERM 2159 1637001 - 1636983 - T 100 -12.4 -5.88565 | opp_overlap 1636980 1636983 GTCAGAATAAAAAAA TGCGAGCC TAT GGCCCGCA TCGTATGTGCAATAT SEN1538 1637233 - 1637051 - | hypothetical protein dcp 1639619 - 1637577 - | dipeptidyl carboxypeptidase II ydfG 1639758 - 1640504 + | putative oxidoreductase ydfH 1640634 - 1641320 + | putative regulatory protein ydfZ 1641502 - 1641705 + | hypothetical protein TERM 2160 1641736 - 1641762 + T 73 -10.8 -3.10901 | overlap 1641734 1641738 GGAACCGTTCCGGCC TTCCCGGTAGCA TAA TGCTACCGGGTC TCTGTTACGCTATTT TERM 2161 1641738 - 1641760 + T 100 -17.8 -3.10513 | overlap 1641736 1641734 AACCGTTCCGGCCTT CCCGGTAGCA TAA TGCTACCGGG TCTCTGTTACGCTAT ydfI 1643238 - 1641772 - | putative D-mannonate oxidoreductase TERM 2162 1643378 - 1643324 - R 88 -8 -4.99947 | gap 3, overlap 1643328 GCTAATTAAACAAAA GTGACCGGGCAGCATGGCCGAAACCGC ATTA GCG-TTCCGGCCATACCGTC-GA-CAC GATTTAACTCGTCTG SEN1543A 1644761 - 1643382 - | putative membrane transport protein TERM 2163 1644581 - 1644540 - G 72 -2.1 -4.91852 | opp_overlap 1644543, overlap 1644566 1644576 TTTACCAAAAACAAA GGCGCCGATAATTCTGGCT ATAT AACCTGCACCATAGGTGCC CATTGCCAGAATAAG rspB 1645834 - 1644815 - | starvation sensing protein RspB rspA 1647059 - 1645845 - | starvation sensing protein RspA TERM 2164 1646527 - 1646537 + g 81 -8.2 -4.3739 | overlap 1646525 CACAATTGTTCTTCC GGCC ACT GGCC TTTTGTCGCGGGCTC TERM 2165 1647173 - 1647141 - R 84 -8.3 -4.67755 | ATATTGATGTAAAAA GCGCTGCCAGATCAC AAA ATGTTCTGGTCGCGC GGCAATGTTACGTAC ynfA 1647507 - 1647181 - | hypothetical protein ynfB 1647659 - 1648000 + | putative secreted protein TERM 2166 1648228 - 1648186 - g 76 -9.4 -3.96624 | overlap 1648207 GATCTCTACGACAAA CACATCC-ACGACCAAAGCG AACGG CGCTTTG-TCGTCGAATGCG ACGGTGAAAACGCCG TERM 2167 1648347 - 1648327 - g 77 -8.1 -4.21908 | GAGTACCAGGGAAAA GGCCTGGCG TCA CGCGCGGCC AAACTGGCGATGGAT speG 1648036 - 1648596 + | spermidine N1-acetyltransferase TERM 2168 1648610 - 1648583 - T 71 -10.5 -2.72144 | opp_overlap 1648598 1648598, overlap 1648582 1648598 CTACGCTCCTGAAAC CCACCGCGCAG TAAACG CGGCGCGGTAG TCACGGAGAGTCGCA ynfC 1649356 - 1648637 - | exported protein ynfD 1649451 - 1649759 + | hypothetical protein TERM 2169 1650380 - 1650362 - g 73 -5.3 -4.59773 | gap 1, opp_overlap 1650377, overlap 1650364 CGCCAGCCTGAAAAA GACCGTAG AGAC CTACGG-C AATGAAGCCGTTTAT TERM 2170 1650379 - 1650364 - g 73 -9 -3.91506 | opp_overlap 1650377, overlap 1650362 CCAGCCTGAAAAAGA CCGTAG AGAC CTACGG CAATGAAGCCGTTTA dmsA1 1649913 - 1652354 + | putative dimethyl sulphoxide reductase subunit A TERM 2171 1654317 - 1654304 - g 93 -4.5 -5.45652 | overlap 1654284 ATTTTCAAGAAAAAA TGCCC GGAG GAGCA CTACGTCGCTTTCCG TERM 2172 1654734 - 1654706 - g 74 -7.3 -4.08767 | CTCATTCTGGCAAAA GTCACGCCGCGCA TAT TGCCTGGCGTCAC CGCTATCGGCCAGGG dmsA3 1652453 - 1654888 + | putative dimethyl sulphoxide reductase subunit dmsB1 1654899 - 1655516 + | putative anaerobic dimethyl sulfoxide reductase TERM 2173 1655649 - 1655661 + G 95 -5.5 -5.38047 | CGCCCGTCAGCGCAT CGTGC GTA GCATG TTTTTTCTGTGGCTG dmsC1 1655518 - 1656375 + | putative dimethyl sulphoxide reductase subunit TERM 2174 1656382 - 1656401 + F 72 -9.2 -3.6512 | opp_overlap 1656380, overlap 1656383 1656393 1656394 GCAGGTTAATTTATG CGTGCGGG GCGA CCCGCACC TTTCGGGATTGTTTG TERM 2175 1656383 - 1656400 + F 79 -12.7 -2.78349 | opp_overlap 1656380, overlap 1656382 1656393 1656394 CAGGTTAATTTATGC GTGCGGG GCGA CCCGCAC CTTTCGGGATTGTTT TERM 2176 1656455 - 1656477 + G 72 -2.6 -4.89477 | overlap 1656458 ATGATTTTTCAGTAA CGGCGCGT GTTCTTG GCGCGTTG TTTTATTATTCGCCG TERM 2177 1656807 - 1656783 - g 70 -2.8 -4.75309 | opp_overlap 1656783 1656803, overlap 1656778 1656774 TGAAATGCAACAAAA CGAGCCAGAA GATCA TTTTGGGTCG CTGTTGCTGCTGGCG ynfI 1656418 - 1657032 + | hypothetical protein TERM 2178 1657044 - 1657061 + F 81 -8.4 -4.42788 | opp_overlap 1657044 TTAATCCCCACAAAA GGCAGG ATTTTA CCTGCC TTTTCTCCCATTGCG TERM 2179 1657061 - 1657044 - f 81 -8.4 -4.4017 | opp_overlap 1657044 TTAATCCCCACAAAA GGCAGG ATTTTA CCTGCC TTTTCTCCCATTGCG TERM 2180 1657110 - 1657098 - f 84 -7.7 -4.87665 | TTTTATCTACAAAAA GTGAC AAC GTCAC ACTACATTTCTGTTT TERM 2181 1657521 - 1657532 + G 71 -5.8 -4.25104 | overlap 1657510 CTTTACTGGTCGGTA TCCC GAGC GGGA TTTTACTCAGCCGAC SEN1556 1657337 - 1658047 + | putative ABC transporter membrane protein TERM 2182 1658517 - 1658491 - g 70 -8.8 -3.65542 | overlap 1658489 1658494 CCGAGTCGGAAAATA TCACCACCATCT CGC AAATGGTGGCAA AAATCGAACAGGTCC SEN1557 1658076 - 1658978 + | putative ABC transporter periplasmic binding protein TERM 2183 1659247 - 1659261 + G 76 -3.4 -5.03405 | overlap 1659249 GTATTGGCGTTCTGC CCGCTG TGA CGGCCG TTTTTCTCTACTCTT SEN1558 1658988 - 1659635 + | putative ABC transporter membrane protein TERM 2184 1659990 - 1659971 - g 82 -11.4 -3.85698 | TTGGGTTGGGACAAA GCGCGCTG TAAG CAACGCGC CGAAGAGTTGATGGA SEN1559 1659635 - 1660783 + | putative ABC transporter ATP/GTP-binding protein TERM 2185 1660781 - 1660825 + F 73 -10 -3.31248 | opp_overlap 1660776 1660784, overlap 1660784 1660789 1660824 ATTCACGAAAGCAGC TAACGTTGCCGCCGGATGGC CTCTC GCTATCCGGCAGTATCATTA TTGTACGCAATATTA TERM 2186 1660789 - 1660817 + F 80 -12.4 -3.04443 | opp_overlap 1660776 1660784, overlap 1660784 1660781 AAGCAGCTAACGTTG CCGCCGGATGGC CTCTC GCTATCCGGCAG TATCATTATTGTACG TERM 2187 1660845 - 1660855 + F 74 -6.8 -4.2349 | ACGCAATATTATATC GCAC ATA GTGC TTTTGCGTCTGACGC TERM 2188 1661891 - 1661871 - g 70 -6.8 -4.07568 | TTTTTGCGTGCAAAA TCCTGGCG GTGCT CGCCAGCA GCGGGTCTGGCGCGC TERM 2189 1662123 - 1662093 - g 71 -9.7 -3.56092 | opp_overlap 1662096, overlap 1662094 1662096 TGATGATTTGTGAAA TGACCGGCGAGTA TCAGT TACTCCCCGGTCT GCTGATTGCCTGTGT TERM 2190 1662122 - 1662094 - g 79 -13.2 -2.73441 | opp_overlap 1662096, overlap 1662093 1662096 GATGATTTGTGAAAT GACCGGCGAGTA TCAGT TACTCCCCGGTC TGCTGATTGCCTGTG SEN1560 1660919 - 1662208 + | putative voltage gated chloride channel protein ynfK 1662859 - 1662164 - | Dethiobiotin synthetase mlc 1664205 - 1662985 - | putative regulatory protein TERM 2191 1663981 - 1664005 + g 79 -11.3 -3.62756 | overlap 1663979 CACCATCAGCCCTAC GGCGGGACGTC CGC GACTGCCCGCC TCTTTAATTTCAAGT ynfL 1665232 - 1664333 - | putative regulatory protein TERM 2192 1664666 - 1664648 - G 83 -7.4 -4.66163 | opp_overlap 1664664 ATGCGGATCGAAAAA GACGAAAG GTT CTTCCGCC AGTTCTGTCAGACTG TERM 2193 1664909 - 1664897 - G 71 -6.3 -4.28254 | GCGGAACAGCGAAAA GGTAT GCG ATACC GCCCGAATAAAAGGC TERM 2194 1664967 - 1664999 + g 81 -11.9 -3.54424 | opp_overlap 1664975, overlap 1664968 TCACCCGCTTCGCCC TGATGCAACCGCTCG GCG CGAGCGGCGGCGTCG TTTACCAGACTCAGG TERM 2195 1664968 - 1664998 + g 79 -13.2 -2.72511 | opp_overlap 1664975, overlap 1664967 CACCCGCTTCGCCCT GATGCAACCGCTCG GCG CGAGCGGCGGCGTC GTTTACCAGACTCAG TERM 2196 1664991 - 1664975 - G 84 -13.7 -3.05384 | opp_overlap 1664968 1664967 TTCGCCCTGATGCAA CCGCTCG GCG CGAGCGG CGGCGTCGTTTACCA TERM 2197 1666072 - 1666091 + G 85 -4.3 -5.1861 | gap 1, overlap 1666065 1666063 1666062 1666072 CGCGATCGGGGGTTA CC-TCTGC TGTTT GCAGAAGG TTTTTTACTGATGGG ynfM 1665352 - 1666605 + | putative membrane transport protein TERM 2198 1666649 - 1666613 - f 80 -7.2 -4.65263 | opp_overlap 1666612 1666615, overlap 1666615 1666616 ATGCCTGAAAAGAAA TATTCCGGCGATAGCA ACGTG CGCTATCGCCGGGCTG GTTTCACGCCACGAC TERM 2199 1666647 - 1666615 - f 80 -9.8 -3.93868 | opp_overlap 1666615 1666612, overlap 1666613 1666616 GCCTGAAAAGAAATA TTCCGGCGATAGCA ACGTG CGCTATCGCCGGGC TGGTTTCACGCCACG TERM 2200 1666615 - 1666647 + F 74 -11.3 -2.90496 | opp_overlap 1666613 1666615 1666616, overlap 1666612 GCCTGAAAAGAAATA TTCCGGCGATAGC AACGTGC GCTATCGCCGGGC TGGTTTCACGCCACG TERM 2201 1666646 - 1666616 - f 82 -13.3 -2.95598 | opp_overlap 1666615 1666612, overlap 1666615 1666613 CCTGAAAAGAAATAT TCCGGCGATAGCA ACGTG CGCTATCGCCGGG CTGGTTTCACGCCAC SEN1564A 1667000 - 1667248 + | Acid shock protein TERM 2202 1667263 - 1667281 + F 84 -8.1 -4.57569 | gap 1, opp_overlap 1667258, overlap 1667263 1667264 1667275 AGTCGTAACATGCTG C-GGCGCG CCCC CGCGCCCG TTTTTACGGCGCTAA TERM 2203 1667264 - 1667279 + F 76 -11.8 -2.60211 | opp_overlap 1667258, overlap 1667263 1667263 1667275 GTCGTAACATGCTGC GGCGCG CCCC CGCGCC CGTTTTTACGGCGCT SEN1565 1667517 - 1668338 + | putative exported protease TERM 2204 1668347 - 1668372 + T 86 -14.8 -2.62263 | opp_overlap 1668339 GGATTAATGCGGGAA TCGCTGCCTG AACCGA CAGGCAGCGA TCGTCTCAGGCAAAT mdtI 1668707 - 1668378 - | putative drug resistance protein mdtJ 1669056 - 1668694 - | putative drug resistance protein TERM 2205 1670108 - 1670075 - g 71 -4.5 -4.56775 | gap 1, overlap 1670077 ATCTGGTGCTAAAAA CA-GCGATCAGTATCG TGA CGGGACTGGTCGCATG GGGAATGCTGGCCGC SEN1568 1669474 - 1670508 + | hypothetical protein TERM 2206 1670666 - 1670649 - T 100 -12.7 -4.87786 | TGAAGTGTATAAAAA CGGCCTC CGAA GAGGCCG CCGCACGTTTAAAAG pntB 1672071 - 1670683 - | pyridine nucleotide transhydrogenase subunit-beta TERM 2207 1671062 - 1671075 + g 72 -3.7 -4.72386 | opp_overlap 1671050 AAACGCACATTGATA CCGCG CGCA CGCAG TTTTTCGGTGATTTC pntA 1673611 - 1672082 - | pyridine nucleotide transhydrogenase subunit-alpha TERM 2208 1674338 - 1674324 - g 71 -7.8 -4.03234 | opp_overlap 1674324 CGCCGCGCAGATAAA GAAGGC GCA GCCTCC TTCTATGTTGTCGAC TERM 2209 1674680 - 1674663 - g 70 -7 -4.09117 | opp_overlap 1674679, overlap 1674676 1674679 TTTATCTATAAACAA GATGCG AAAAAA CGCATC GTCCAGAGCCCGGAC ydgH 1674138 - 1675082 + | hypothetical protein TERM 2210 1675133 - 1675080 - f 71 -7.5 -3.87815 | gap 2, opp_overlap 1675085 1675119, overlap 1675083 GCCGACCTCTATAAA TAAGGC--GCGCGCCGCCATCAGGC TTTCTC GCCGGATGACGGCATACCTGCCTTA TCAGGCCTACACGAT TERM 2211 1676077 - 1676062 - g 75 -3.9 -4.89063 | opp_overlap 1676075 1676076 CGAGCGAAAAATAAA CGCGA TGTAGG CCGCG CCACGCTACTGGCGG TERM 2212 1676291 - 1676304 + G 71 -8.1 -3.85698 | GCTGGACTATCATGG CGGCA GAGG TGCCG TTTCTGGCGGCAGCC ydgI 1675381 - 1676763 + | putative amino acid permease TERM 2213 1676806 - 1676767 - T 81 -12.4 -3.28712 | overlap 1676768 CTGGTGGGTTGACAA CCTCCCCATCGTAATA TCCGTCTG TATTACGATGGGGAAA CCACGGTCTTTGCCA TERM 2214 1676805 - 1676768 - T 83 -13.7 -2.57132 | overlap 1676767 TGGTGGGTTGACAAC CTCCCCATCGTAATA TCCGTCTG TATTACGATGGGGAA ACCACGGTCTTTGCC ydgC 1677160 - 1676825 - | hypothetical protein rstA 1677287 - 1678018 + | putative two-component response regulator ompN 1678498 - 1679649 + | outer membrane protein TERM 2215 1679671 - 1679689 + F 100 -17.4 -5.61277 | ATTAATTCTTCTCAA GCCCGCCG TTT CGGCGGGC TTTTCTTTTTTTATC SEN1576 1679802 - 1681508 + | hypothetical protein TERM 2216 1681562 - 1681542 - f 77 -11.1 -3.28791 | opp_overlap 1681543, overlap 1681546 AGCCTGCTTTTATAA CCCACCAGC GGC GCTGACGGG AAATCTTTTTCGTCA TERM 2217 1681882 - 1681916 + G 73 -10.6 -3.33261 | opp_overlap 1681876, overlap 1681884 1681885 TCACTATAAGCTTGA TGCCGCCACCACGCAG CGA CTGCGTGAAGGCGATA TTGTCGCGCTTGACG TERM 2218 1681884 - 1681914 + G 74 -11 -3.23447 | opp_overlap 1681876, overlap 1681882 1681885 ACTATAAGCTTGATG CCGCCACCACGCAG CGA CTGCGTGAAGGCGA TATTGTCGCGCTTGA TERM 2219 1681885 - 1681913 + G 81 -14.5 -2.53747 | opp_overlap 1681876, overlap 1681884 1681882 CTATAAGCTTGATGC CGCCACCACGCAG CGA CTGCGTGAAGGCG ATATTGTCGCGCTTG rstB 1681619 - 1682920 + | two component sensor kinase TERM 2220 1683201 - 1683222 + G 71 -4.4 -4.67607 | opp_overlap 1683191 AAGAGGCCGAAACGC TGGCGCTA CGTCAC TATCGCCA TTTGTTTATTCAACA TERM 2221 1683272 - 1683284 + G 73 -6.2 -4.50976 | AGTAAAGCCGCCGTC CGCC TGCCT GGCG TTTTATGCTATCAAG TERM 2222 1683592 - 1683573 - g 100 -7 -5.44119 | overlap 1683574 1683575 GCCAGTTGAAAAAAA GCCTCGCG TCGC CGCGCAGC GTCCCGCCGTGGACG TERM 2223 1683759 - 1683743 - g 74 -4.3 -4.75404 | overlap 1683745 AAAGGCCAGCAAAAA CAGGTGC AAC ACGCCTG CCCCACGCCGATTAT TERM 2224 1683889 - 1683869 - g 71 -11.1 -2.90813 | opp_overlap 1683869 1683868 1683871, overlap 1683866 1683871 CACCGTTTTAAACCA CAGGCGCAG CCG CTGCGACTG ATTATTCCGCGACTG tus 1682996 - 1683925 + | DNA replication terminus site-binding protein fumC 1685325 - 1683922 - | Fumarate hydratase class II TERM 2225 1684008 - 1684032 + g 77 -8.5 -4.07535 | overlap 1684004 1684009 GGTATCCTAATGCCA CGGCTGAGGCT TTG AGCGTCAGCCC TTCTTTATGCGCCTT TERM 2226 1684009 - 1684031 + g 76 -12 -3.03798 | overlap 1684004 1684008 GTATCCTAATGCCAC GGCTGAGGCT TTG AGCGTCAGCC CTTCTTTATGCGCCT TERM 2227 1685467 - 1685492 + r 79 -11.1 -3.33696 | opp_overlap 1685467 1685464 1685459 CAAAATAGCGAATCA TGTTACCGCCC CGCA GGGCGGCGACA TTACTTAACGCAGCG TERM 2228 1685492 - 1685467 - R 74 -11.1 -2.81509 | opp_overlap 1685467, overlap 1685464 1685459 CAAAATAGCGAATCA TGTTACCGCCC CGCA GGGCGGCGACA TTACTTAACGCAGCG fumA 1687139 - 1685493 - | Fumarate hydratase class I, aerobic TERM 2229 1686881 - 1686894 + g 70 -6.7 -4.1899 | GCAGGAATTGCAGCG CGACA TATT TGTCG TTTTCACTGGCCTGC TERM 2230 1687558 - 1687538 - g 80 -4.5 -5.093 | opp_overlap 1687556, overlap 1687539 TCGAAAAGAATAAAA CCGCCATGC TGG GCGAAGCGG TAGCCAACCGTTTCG TERM 2231 1687572 - 1687584 + G 74 -6.9 -4.33928 | GGTAGCCAACCGTTT CGGCG AAC TGCCG TTTCTGTTTAAAGTA manA 1687339 - 1688514 + | mannose-6-phosphate isomerase TERM 2232 1688572 - 1688593 + F 100 -13 -4.38116 | overlap 1688569 AGACGTAAAACTCCT CCAGGCGG TTTAAT CCGCCTGG TTTCATTTTTATGGA ydgA 1688617 - 1690125 + | hypothetical protein TERM 2233 1691344 - 1691316 - g 74 -9.7 -3.64198 | gap 1 GGCGCACAGAGAGAA CATCACCGCGCT GGATTT AGC-CGGTGATG AGCTGGGCTTTCCCG TERM 2234 1691812 - 1691800 - g 71 -4.7 -4.60041 | overlap 1691802 AGCGATGGCGAAAAA CGTGC GCT GCGCG AAAAAGTGGCCGCGG add 1690831 - 1691832 + | adenosine deaminase ydgJ 1692947 - 1691907 - | putative oxidoreductase TERM 2235 1692064 - 1692045 - G 87 -13.6 -3.21593 | opp_overlap 1692033 1692035 1692035, overlap 1692043 GATGGCGGCATAATA TGCCGGGT AGTT ACCCGGCA ACGTAAGCCAGTTCT TERM 2236 1692576 - 1692562 - G 82 -5.6 -5.03314 | opp_overlap 1692563, overlap 1692563 TTCAGCGTCAAAAAA TCGCTG TCC CAGCGT CGGTTGTGGAAGACG TERM 2237 1693434 - 1693455 + H 73 -11.5 -2.61695 | overlap 1693433 1693431 CGTTAACCTTTCGCC CCAGGCGCC ATGT GGCGCCTGA CTCTTTACCGGTAAG TERM 2238 1693487 - 1693514 + H 89 -6.2 -5.3472 | ATATTCCCTTTTTAC CTGCACCCCTGA CCTC TCACTGGTGCGG TTTTGTTTATTTTTT ydgT 1693563 - 1693793 + | hypothetical protein ydgK 1693882 - 1694322 + | hypothetical protein TERM 2239 1694814 - 1694826 + G 77 -4.7 -4.90869 | overlap 1694796 CGCTGTACGGATTTT CCGCC GCC GTCGG TTTTTCATTAGTGAT TERM 2240 1694876 - 1694895 + G 71 -6.3 -4.30576 | overlap 1694878 CGCGAACGCCTTGCC GTGGCGG ATGTGC CCGCCCC TTTTCGTGGTAACGC rnfA 1694399 - 1694980 + | Electron transport complex protein rnfB 1694980 - 1695558 + | Electron transport complex protein TERM 2241 1695710 - 1695695 - g 70 -6.8 -4.08767 | GTTATCCCCTTAAAA CAGCAC ATTG GCGCTG AGGGCGAGTTGTGCG TERM 2242 1696926 - 1696904 - g 76 -3.2 -5.06816 | AGGCTTGAAGAAAAA CGCGCCGCCG AAG CCAAAGCGCG TTTTGAGGCTCGTCA TERM 2243 1697645 - 1697633 - g 93 -4.7 -5.47218 | GTTCAGGCAAAAAAA GCAGC ACA GCAGC AGGTTGTTAACGAGG rnfC 1695551 - 1697665 + | Electron transport complex protein TERM 2244 1697763 - 1697776 + G 90 -5.9 -5.26875 | overlap 1697746 CTCTGCCGGGGATTG CCGCG CAGA CGTGG TTTTTTGGTTGGGGA TERM 2245 1698412 - 1698441 + G 73 -10.7 -3.41587 | gap 1, overlap 1698417 CCCGGTCAGTTTTCT GCTGACGCTGGCGC TAT GCGCC-GCGTTAGG TTGGCTTTTCTCGCC TERM 2246 1698417 - 1698436 + G 74 -11.4 -3.2352 | gap 1, overlap 1698412 TCAGTTTTCTGCTGA CGCTGGCGC TAT GCGCC-GCG TTAGGTTGGCTTTTC rnfD 1697666 - 1698724 + | Electron transport complex protein rnfG 1698728 - 1699348 + | Electron transport complex protein TERM 2247 1700026 - 1699987 - g 87 -8.5 -4.54301 | gap 1, overlap 1699989 GAAAAAATGAAGAAA CGCCGCGCCGAAACCGCG CCTTC CGCTGTTCCGGCA-GGTG AAACAGGGAAAGTCT rnfE 1699351 - 1700043 + | putative electron transport complex protein rnfE nth 1700043 - 1700678 + | endonuclease III TERM 2248 1701320 - 1701300 - g 91 -4 -5.64421 | opp_overlap 1701304 1701310, overlap 1701304 1701305 1701311 ACTGCAAACAAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTCAAACAA TERM 2249 1701331 - 1701304 - g 77 -8.6 -4.07772 | gap 1, opp_overlap 1701304 1701310 1701320 1701323, overlap 1701300 1701305 1701311 CAAACAAAAAACCAA CTGAAAGCG-TCA GTT TGAACGCTTTCAA ACAACCGAAGGCGTT ydgR 1701279 - 1702784 + | putative proton/oligopeptide symporter TERM 2250 1702772 - 1702761 - f 74 -5.8 -4.59109 | GATACCGCTGAAAAA GGCT CTAA AGCC GCTACAGTTTAATTT TERM 2251 1702807 - 1702829 + F 100 -13.5 -6.17184 | opp_overlap 1702803 GGAAACAACATTCAG GCCGCTAAC TGTGC GTTAGCGGC TTTTTTTTTGCTCGT gst 1702889 - 1703494 + | glutathione S-transferase pdxY 1704413 - 1703553 - | pyridoxamine kinase (ec 2.7.1.35) (pm kinase) TERM 2252 1704461 - 1704436 - R 80 -6.1 -4.87626 | opp_overlap 1704437 1704439, overlap 1704439 CCTGAACATCAAAAA TAAGGGAGTGA TTTC TCACTCCCTGT TACTTAATGCCTTAT TERM 2253 1704437 - 1704460 + r 73 -9.6 -3.41581 | opp_overlap 1704436 1704439, overlap 1704439 CTGAACATCAAAAAT AAGGGAGTGA TTTC TCACTCCCTG TTACTTAATGCCTTA TERM 2254 1704458 - 1704439 - R 100 -12.2 -4.53398 | opp_overlap 1704439 1704437, overlap 1704436 GAACATCAAAAATAA GGGAGTGA TTTC TCACTCCC TGTTACTTAATGCCT TERM 2255 1704439 - 1704458 + r 81 -12.2 -3.27297 | opp_overlap 1704436 1704439, overlap 1704437 GAACATCAAAAATAA GGGAGTGA TTTC TCACTCCC TGTTACTTAATGCCT tyrS 1705747 - 1704473 - | tyrosyl-tRNA synthetase TERM 2256 1704650 - 1704682 + g 72 -4 -4.81249 | overlap 1704661 CGACGGCTGGAGTTC GGCGTCTACCAG CGCCTGCAT CAGGTCGGCGCC TTTTTCCATTTCAAC TERM 2257 1704857 - 1704872 + g 81 -3.9 -5.21506 | overlap 1704852 1704856 TACATACTGCGCGCG CGGCG CTTTAC CGCTG TTTTTATCTTCTTCT TERM 2258 1705163 - 1705183 + g 74 -7.5 -4.15044 | GTCAGAACCGCCAAT CTGTAAGGC AAC GCCGTGCAG TTTATTCAGACAAGC pdxH 1706530 - 1705874 - | pyridoxamine 5'-phosphate oxidase ydhA 1706918 - 1706589 - | lipoprotein ydhH 1708127 - 1707006 - | hypothetical protein TERM 2259 1707944 - 1707914 - G 75 -6.1 -4.56597 | gap 1, overlap 1707899 1707915 1707916 CCGCCTGTGCAAAAA GCCGGCCTAACTGG GTAT CCAGCT-GGCCGAG TTGCGAGAGCGTAAG TERM 2260 1707943 - 1707915 - G 70 -9.6 -3.33744 | gap 1, overlap 1707899 1707914 1707916 CGCCTGTGCAAAAAG CCGGCCTAACTGG GTAT CCAGCT-GGCCGA GTTGCGAGAGCGTAA slyB 1708399 - 1708866 + | outer membrane lipoprotein SlyB precursor slyA 1709354 - 1708914 - | transcriptional regulator ydhI 1709549 - 1709785 + | hypothetical protein TERM 2261 1710267 - 1710255 - gf 70 -10.5 -2.54881 | opp_overlap 1710265, overlap 1710254 1710253 GACGGAAGTAAAAGC GCCGG TAT CCGGC TGGGTGACCAACCTT TERM 2262 1710550 - 1710526 - gf 83 -10.7 -3.83026 | GTGCCCGATATTAAA CCCAACGTACC GTG GGTACGTCTGG CGCAACGCGTACCGG ydhJ 1709752 - 1710648 + | putative HlyD-family protein TERM 2263 1711964 - 1711974 + G 76 -5.4 -4.77757 | AATCACCGATCTGTG GCAA TTC TTGC TTTTCCTTTTTCCGC SEN1606 1710648 - 1712687 + | hypothetical protein sodC 1713184 - 1712663 - | copper-zinc superoxide dismutase ydhF 1714160 - 1713264 - | putative oxidoreductase TERM 2264 1713704 - 1713692 - G 80 -9.1 -4.208 | opp_overlap 1713690 1713692 1713702 GCGTAAAATTAGAAA CGCCA AAA TGGCG CACTTTGCCGCTTTG TERM 2265 1713802 - 1713813 + g 85 -4.4 -5.17353 | opp_overlap 1713802 AACATATCCAGATAA TCTG TCGC CAGA TTTTTTAATGACTGT ydhL 1714450 - 1714211 - | hypothetical protein TERM 2266 1714588 - 1714610 + G 71 -7.6 -4.03234 | opp_overlap 1714588, overlap 1714589 TGATACCCGCGAACA TCTGCTGGCC ACC GGCGAGCAGC TTTGTATGCAACGGG TERM 2267 1714589 - 1714609 + G 72 -11.1 -3.01726 | opp_overlap 1714588, overlap 1714588 GATACCCGCGAACAT CTGCTGGCC ACC GGCGAGCAG CTTTGTATGCAACGG ydhM 1714553 - 1715152 + | putative TetR-family transcriptional regulator TERM 2268 1715139 - 1715158 + F 89 -6.4 -5.41941 | AGACCATCATTGCAA CGCCTG AGCAGTAA CAGGCG TTTTTATTTCCTTTA nemA 1715211 - 1716308 + | N-ethylmaleimide reductase gloA 1716377 - 1716784 + | lactoylglutathione lyase TERM 2269 1716790 - 1716817 + F 100 -14.8 -4.2828 | opp_overlap 1716785, overlap 1716793 GGGTAACTGATCCCC CGCCGGGCGCAG GTCA CTGCGCCCGTTG TTTTACTGCATCCCG TERM 2270 1716793 - 1716814 + F 100 -17.3 -4.26327 | opp_overlap 1716785, overlap 1716790 TAACTGATCCCCCGC CGGGCGCAG GTCA CTGCGCCCG TTGTTTTACTGCATC TERM 2271 1716908 - 1716922 + G 75 -7.1 -4.45077 | TAACGCTCAACTTTC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA TERM 2272 1717226 - 1717213 - g 70 -5.2 -4.5123 | AAGGTATCAAAGAAA GCGG TTGTAG CCGC GCCATTATGGTCGCG TERM 2273 1717453 - 1717463 + G 75 -6.8 -4.40804 | overlap 1717423 ATGATACCGAGCGGA CAGC GGT GCTG TTTTGTGAAATCGTC rnt 1716885 - 1717532 + | Ribonuclease T TERM 2274 1717593 - 1717576 - T 100 -11.3 -5.0133 | opp_overlap 1717576 GATGGCGGTAAAAAA GCGACCT TTAC AGGTCGC TTTCCCCTTTCACAG TERM 2275 1717576 - 1717593 + T 86 -11.3 -3.71649 | opp_overlap 1717576 GATGGCGGTAAAAAA GCGACCT TTAC AGGTCGC TTTCCCCTTTCACAG ydhD 1717957 - 1717610 - | hypothetical protein TERM 2276 1717916 - 1717935 + g 91 -7.9 -5.1101 | CAGGAGAATCGGGTT TTCAGCG ATCTGG CGCTGAA TTTTTTCGATAGTGG TERM 2277 1718139 - 1718153 + H 100 -4.3 -5.83822 | TAACGCGTTCGTGTT TAGCA TTAAT TGCTA TTTTTTTTACATCTG TERM 2278 1718729 - 1718716 - g 74 -2.3 -5.09245 | GCAAAAGTACAAAAA GCGAC GAAA ACCGC GATGTCCAAACTCAT ydhO 1718260 - 1719114 + | putative secreted protein TERM 2279 1719147 - 1719117 - f 70 -9.8 -3.05066 | opp_overlap 1719118 1719119 AACAATTCGCTAATA TTTTATCCTGTCGT TTA ACGACAGGATAACT TCTTCTTTTGCGCCA TERM 2280 1719118 - 1719146 + F 95 -13.3 -4.20868 | opp_overlap 1719117, overlap 1719119 ACAATTCGCTAATAT TTTATCCTGTCGT TTA ACGACAGGATAAC TTCTTCTTTTGCGCC TERM 2281 1719119 - 1719145 + F 100 -16.8 -3.11798 | opp_overlap 1719117, overlap 1719118 CAATTCGCTAATATT TTATCCTGTCGT TTA ACGACAGGATAA CTTCTTCTTTTGCGC sodB 1719241 - 1719822 + | superoxide dismutase TERM 2282 1719832 - 1719853 + F 100 -14.5 -4.07885 | opp_overlap 1719824 1719823 GCATAAGTCTGAGTA CGCAGAAGG TACG CCTTCTGCG TTTTAGAGAGGGATA TERM 2283 1720387 - 1720363 - g 81 -7.1 -4.79174 | overlap 1720358 1720384 ACGTAATCAACAAAA CGCGTTTTGTC GCT GAAGAAACGCG TAACGCGGTCTGGGC TERM 2284 1720394 - 1720384 - g 77 -8.2 -4.15044 | overlap 1720363 TTGTCGCTGAAGAAA CGCG TAA CGCG GTCTGGGCGGCAATT purR 1720290 - 1721315 + | purine nucleotide synthesis repressor ydhB 1722244 - 1721312 - | putative transcriptional regulator TERM 2285 1722074 - 1722053 - G 75 -5.7 -4.56597 | opp_overlap 1722058, overlap 1722054 1722056 CCCTTCTTTTAAAAA CCAGACGCC AGCA GGCGTCAGT TCAACATCACGGTGA TERM 2286 1722071 - 1722056 - G 71 -10.4 -3.23708 | opp_overlap 1722058, overlap 1722054 1722053 TTCTTTTAAAAACCA GACGCC AGCA GGCGTC AGTTCAACATCACGG TERM 2287 1722491 - 1722503 + G 70 -3.3 -4.69027 | opp_overlap 1722470, overlap 1722499 CGCCGCGGTCAGCGC CAGCC TAA GCCTG TTTTTAGCTGGCTTT TERM 2288 1722657 - 1722634 - g 73 -8.8 -3.85698 | gap 1, opp_overlap 1722634 1722646 1722647 TGCTGTGGGTAGAAA GC-GCGGCAGC ACT GCTGACGCTGC GCTTCGTGCAGGCCG TERM 2289 1723162 - 1723149 - g 70 -3.1 -4.82901 | GCGGCGCTACAAAAA TGGCA GGGC TACCA ATTGCTTCCGTGGCT ydhC 1722357 - 1723562 + | putative integral membrane transport protein cfa 1723852 - 1725000 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2290 1724998 - 1725034 + T 74 -6.8 -4.27316 | gap 2, opp_overlap 1725004, overlap 1725002 1725005 1725006 CTGCGCGTTCCTCGC TAATCATCTCCCCCGCAT TTC ATGCGGGGGA-ATC-TTA TTTTCCGTTAGCCAA TERM 2291 1725002 - 1725031 + T 87 -10.1 -4.25859 | gap 1, opp_overlap 1725004, overlap 1724998 1725005 1725006 GCGTTCCTCGCTAAT CATCTCCCCCGCAT TTC ATGCGGGGGA-ATC TTATTTTCCGTTAGC TERM 2292 1725030 - 1725004 - T 81 -13 -2.70932 | opp_overlap 1725002 1724998 1725005 1725006 GTTCCTCGCTAATCA TCTCCCCCGCAT TTC ATGCGGGGGAAT CTTATTTTCCGTTAG TERM 2293 1725005 - 1725029 + T 100 -14.3 -3.72228 | opp_overlap 1725004, overlap 1725002 1724998 1725006 TTCCTCGCTAATCAT CTCCCCCGCAT TTC ATGCGGGGGAA TCTTATTTTCCGTTA TERM 2294 1725006 - 1725028 + T 100 -17.8 -2.82253 | opp_overlap 1725004, overlap 1725005 1725002 1724998 TCCTCGCTAATCATC TCCCCCGCAT TTC ATGCGGGGGA ATCTTATTTTCCGTT ribE 1725683 - 1725042 - | riboflavin synthase alpha chain TERM 2295 1725724 - 1725710 - H 79 -4.2 -5.18866 | CTGAAATAAATAAAA GCAGAA CTG TTCAGC ACAATAGCAGGTGGA TERM 2296 1725842 - 1725858 + H 85 -7.2 -4.946 | overlap 1725856 CTGCTATTTCTTTTG GCTGCC ACTAC GGCGGC TTTTTAGTCTTTCAT TERM 2297 1726059 - 1726071 + G 77 -4.8 -4.93877 | ATCGGCACCTCTATC TGGC TTCCC GCCA TTTTGTTTGGTCACG TERM 2298 1726285 - 1726323 + G 100 -10.2 -4.88918 | overlap 1726287 CCGATAAAGCCGTGG GTTATCTTCGCGCGCTGC TGT GGGGCGCGCCAGGATACC TTTTCTTTCAGGTAG TERM 2299 1726588 - 1726575 - g 74 -3.1 -4.86621 | ATTCGTAATGAAAAA GGCTT TGGC AAACC TGATAGCATCGTCAT ydhE 1725900 - 1727273 + | multidrug-efflux transporter TERM 2300 1727282 - 1727301 + T 90 -10 -4.39828 | opp_overlap 1727276 1727274 1727284 GCGATAATACGACGA TAGCCGTC GCAT GGCGGCTA TTTTCTCGACATGTT ssaU 1728804 - 1727746 - | putative type III secretion protein TERM 2301 1727878 - 1727863 - G 71 -4.7 -4.63089 | CACTTCAAAAAATAA TGAGC GGGCCA GCTCA ACATTTTCAACAACG ssaT 1729580 - 1728801 - | putative type III secretion protein ssaS 1729847 - 1729581 - | putative type III secretion protein ssaR 1730491 - 1729844 - | putative type III secretion protein ssaQ 1731527 - 1730559 - | putative type III secretion protein ssaP 1731882 - 1731508 - | putative type III secretion protein ssaO 1732240 - 1731863 - | putative type III secretion protein TERM 2302 1732084 - 1732062 - G 79 -7.8 -4.46854 | TTATCCAACAATAAA TGACAAGATA ACG TACCTTGCCA GCCCATTAATTCTTT ssaN 1733544 - 1732243 - | putative type III secretion ATP synthase ssaV 1735579 - 1733534 - | putative type III secretion protein TERM 2303 1734465 - 1734455 - G 90 -5.4 -5.27938 | ATCCTCAAATAAAAA CCAT CTC ATGG CGTCAATATCACGAA TERM 2304 1734749 - 1734763 + g 82 -11.4 -3.85698 | overlap 1734744 AGAACTCAACTCTGT CGCCAG GTT CTGGCG TTTCTCACCCGGGAC ssaM 1735932 - 1735564 - | putative pathogenicity island protein ssaL 1737006 - 1735990 - | putative secretion system protein TERM 2305 1736576 - 1736592 + gr 100 -7.3 -6.04324 | overlap 1736577 GTAAGCGTATCCAGT TGCGATT GCA AATCGCG TTTTTTCTTTTTTGA TERM 2306 1736577 - 1736591 + gr 77 -8.6 -4.18934 | overlap 1736576 TAAGCGTATCCAGTT GCGATT GCA AATCGC GTTTTTTCTTTTTTG ssaK 1737646 - 1736972 - | putative pathogenicity island protein SEN1635 1738191 - 1737643 - | putative pathogenicity island protein TERM 2307 1737784 - 1737794 + g 70 -6.8 -4.21631 | overlap 1737790 AATGGCGGTACCGAT CTGC AAT GCAG TTTGTTGCATCACTT ssaJ 1738958 - 1738209 - | putative pathogenicity island lipoprotein ssaI 1739203 - 1738955 - | putative pathogenicity island protein ssaH 1739442 - 1739215 - | putative pathogenicity island protein ssaG 1739698 - 1739483 - | putative pathogenicity island protein sseG 1740481 - 1739792 - | putative pathogenicity island effector protein TERM 2308 1740095 - 1740085 - G 85 -2.4 -5.49569 | TAGCAATATAAAAAA CGGC ATT GCCT ATACTGTCGTGAGCC sseF 1741260 - 1740478 - | putative pathogenicity island effector protein TERM 2309 1741243 - 1741266 + g 73 -9 -3.90464 | opp_overlap 1741248, overlap 1741239 1741248 ATTACTTGCCGCTGA CGGAATATGA ATTT TCATATTTCG TTCTGTTATTTAAGC sscB 1741710 - 1741276 - | putative pathogenicity island protein sseE 1742178 - 1741762 - | putative pathogenicity island effector protein sseD 1742768 - 1742181 - | putative pathogenicity island effector protein TERM 2310 1742595 - 1742616 + g 91 -9.5 -4.57569 | gap 1, overlap 1742615 TTTTTCTACGTTATA GCTGCGC-AT GAT ATCGCGCAGC TTTTTGGCAAGCTCC sseC 1744238 - 1742784 - | putative pathogenicity island effector protein TERM 2311 1744225 - 1744237 + g 74 -4.9 -4.69664 | CTGTCGCTATTACTG TGAAT TCG ATTCA TTTTTAGCTCCTGTC sscA 1744714 - 1744241 - | putative Type III secretion system chaperone protein TERM 2312 1744558 - 1744546 - G 74 -4.7 -4.8143 | TCAACAATTGAAAAA GTCGC GCT GCGCC GGCGAACTCTTTTAC sseB 1745301 - 1744711 - | putative pathogenicity island effector effector protein TERM 2313 1744964 - 1744940 - G 81 -12.3 -3.524 | TATTTAGCCATATAA TCATCAATGGT CAT ACCATCGATGA GAATACCATTATCAC TERM 2314 1745213 - 1745248 + g 73 -5.4 -4.57073 | gap 1, overlap 1745215 TGGGATAAGTCATCC TGGCTCCCGGTATCAGC GTT GCTGACGCC-GAAGCTA TTTTTAAACACAATA sseA 1745634 - 1745308 - | putative pathogenicity island protein ssaE 1746079 - 1745837 - | putative secretion system protein ssaD 1747298 - 1746087 - | putative pathogenicity island protein TERM 2315 1746264 - 1746252 - G 73 -9.1 -3.86897 | overlap 1746232 GCGACTCTGTACAAA GCCAG CCA CTGGC GCAGGCAGATACTTG ssaC 1748772 - 1747279 - | putative outer membrane secretory protein ssaB 1749175 - 1748774 - | putative pathogenicity island 2 secreted effector protein TERM 2316 1749965 - 1749979 + G 77 -4.2 -4.92757 | opp_overlap 1749965 TATCGATGAAAATAG CTTTCG TCG CGATAG TTTTATTCTTAATCA TERM 2317 1750749 - 1750737 - g 93 -4.7 -5.66868 | AATGAAGCAAAAAAA CGCGC TGA GCGAG CTAACAAACGTAAAA ssrA 1749576 - 1752338 + | putative two-component sensor kinase ssrB 1752369 - 1753007 + | putative two-component response regulator orf242 1753186 - 1753914 + | putative transcriptional regulator orf319 1754086 - 1755045 + | putative pathogenicity island protein orf70 1755379 - 1755167 - | pathogenicity island protein TERM 2318 1755456 - 1755441 - R 78 -4.8 -4.99947 | CTCAATTAAACAAAA TTTGAT AAAA ATCAAA GAAATAACGCGGTTT ttrR 1756115 - 1755477 - | putative two-component response regulator TERM 2319 1755503 - 1755520 + gr 91 -7.7 -5.00616 | ACGTTGTTCGTATTC TGGTCTC TGGC GAGGCCA TTTTTTCGAAACGCC TERM 2320 1755767 - 1755791 + gr 87 -8.5 -4.57073 | overlap 1755754 1755764 CACGCTCCAGCGCCG CCTGTAGCGGT TTT ACCGATACCGG TTTTTGCAGAAAATC ttrS 1757850 - 1756072 - | putative histidine kinase, two component regulatory protein TERM 2321 1758248 - 1758237 - g 74 -7.2 -4.21922 | opp_overlap 1758236 1758237 CTATTGAAAACCAAA CGCC GCAG GGCG CGTTTCGTACGACGG TERM 2322 1758437 - 1758422 - g 71 -6 -4.30719 | opp_overlap 1758426 1758429 1758436 GTGGTGGATAACAAA CGCTGC GTCG GCTGCG CCTATTGTGTCCAGG ttrB 1758014 - 1758766 + | tetrathionate reductase subunit B TERM 2323 1759282 - 1759294 + G 70 -9.1 -3.63991 | GGCGATGTTCCTTAG CGCCT TAC AGGCG TTCTTCGCGCTGATG ttrC 1758767 - 1759789 + | tetrathionate reductase subunit C (membrane protein) TERM 2324 1761542 - 1761529 - g 75 -6.7 -4.39828 | overlap 1761518 AATACCGCGACAAAA TTGCC GGCG GGCAA TCCCCTTATCCAGCC TERM 2325 1761886 - 1761858 - g 70 -8.7 -3.76224 | opp_overlap 1761865 1761878 GGCGTAGCCAGTAAA GCCACTACCGCCC GCT GGCCGGTTGTCGC CCCCGCCACTCGCCG ttrA 1759782 - 1762844 + | tetrathionate reductase subunit A orf408 1763167 - 1764393 + | putative ribokinase/regulatory protein TERM 2326 1765095 - 1765119 + G 80 -9.4 -4.08216 | opp_overlap 1765097 TTTCTGCAATGGGAA CATTACGCCA CCTTC TGGTGTAATG TTTTACACACAATAA orf245 1764405 - 1765142 + | Orf 245 protein orf32 1765201 - 1766094 + | putative hydrolase orf48 1766116 - 1767459 + | putative amino acid permease TERM 2327 1767490 - 1767465 - f 71 -10.5 -2.64616 | overlap 1767477 1767478 GCTCGATTGACATTA TGCGCAACAAC ACCC ACTGTTGCGCA ACGCCGCCCCTGTTC TERM 2328 1767492 - 1767513 + F 90 -14.4 -3.28712 | opp_overlap 1767478 1767477 CCCACTGTTGCGCAA CGCCGCCC CTGTTC GGGCGGCG TTATCGCCAGCGACA TERM 2329 1768747 - 1768721 - g 72 -3.6 -4.77036 | overlap 1768723 1768746 TTCTATGATCAAAAA CCCGCGTCCG ACCCGCG CAGAAGCAGG CGACGTAGCGAACGC pykF 1767915 - 1769273 + | pyruvate kinase TERM 2330 1769298 - 1769328 + F 86 -11.3 -3.76224 | opp_overlap 1769306, overlap 1769306 TGTGAATTAATTTGT TTAAAAAAGCGCC CTTCC GGCGCTTTTTTTA TTTAATCGATAGCCA TERM 2331 1769320 - 1769306 - f 91 -8.5 -5.01732 | opp_overlap 1769306 1769298 AATTTGTTTAAAAAA GCGCC CTTCC GGCGC TTTTTTTATTTAATC TERM 2332 1769306 - 1769320 + F 100 -8.5 -5.99154 | opp_overlap 1769306, overlap 1769298 AATTTGTTTAAAAAA GCGCC CTTCC GGCGC TTTTTTTATTTAATC TERM 2333 1769404 - 1769431 + F 72 -2.6 -5.03747 | TTATCTAAGAAGAAT CCGATGGAAGCC CCCT GTTTTCTTTCGG TTTTTTAGGGACTTT lpp 1769584 - 1769820 + | major outer membrane lipoprotein TERM 2334 1769876 - 1769824 - f 100 -17.3 -2.54574 | opp_overlap 1769841, overlap 1769812 1769826 1769841 TACCGTAAGTAATAG TACCTGCGTAATAAAAATGGCGCAC ATC GTGCGCCATTTTTTTTACCCATATA ACCACGCAAAGTATA TERM 2335 1769874 - 1769826 - f 93 -15.5 -2.80699 | opp_overlap 1769841, overlap 1769812 1769824 1769841 CCGTAAGTAATAGTA CCTGCGTAATAAAAATGGCGCAC ATC GTGCGCCATTTTTTTTACCCATA TAACCACGCAAAGTA TERM 2336 1769841 - 1769859 + F 100 -14.6 -5.76949 | opp_overlap 1769826 1769824 1769841 CCTGCGTAATAAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTTACCCATA TERM 2337 1769859 - 1769841 - f 100 -14.6 -5.06414 | opp_overlap 1769841, overlap 1769826 1769824 CCTGCGTAATAAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTTACCCATA lppB 1769903 - 1770145 + | major outer membrane lipoprotein TERM 2338 1770188 - 1770160 - T 87 -14.7 -2.80935 | opp_overlap 1770165, overlap 1770165 ATTTGACGCACGATA TAAAATGGCGCAC ATC GTGCGCCATTTTT TTGTCCGTCGTTTGC TERM 2339 1770183 - 1770165 - T 100 -14.6 -4.57755 | opp_overlap 1770165, overlap 1770160 ACGCACGATATAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTGTCCGTCG TERM 2340 1770165 - 1770183 + T 100 -14.6 -5.64274 | opp_overlap 1770160 1770165 ACGCACGATATAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTGTCCGTCG ynhG 1771212 - 1770211 - | hypothetical protein TERM 2341 1771313 - 1771289 - R 72 -9.3 -3.60952 | overlap 1771287 1771311 1771312 GAACAACAAAATATA CGCTCTGTCCA CTC TGGATAAAGCG ACGTCGCCGTCCGAC ynhA 1771783 - 1771367 - | hypothetical protein TERM 2342 1771440 - 1771458 + g 74 -2.3 -5.0133 | overlap 1771441 GAACGAGAAGGTGTG AGGTGCT GCGCA AGCGCCA TTTTTTCGAACCATG sufS 1773016 - 1771796 - | putative amintransferase TERM 2343 1772223 - 1772199 - G 74 -7.8 -4.07568 | gap 1, opp_overlap 1772199 GTTCCCGCCTCAAAA CGCCA-GGGCG CTTT CGCCCATGTCG TTCCCTGCGTCAGGC TERM 2344 1772388 - 1772364 - G 77 -4.9 -4.89729 | overlap 1772366 GAGAAAACGTAAAAA TCGCAGTCCAG CGC CTGGACGTCAA CAGCATGGTGCATCA TERM 2345 1772974 - 1772995 + g 72 -3.7 -4.82901 | TAACTTCACGCTGCA GTATGGG AAAATCCG CCCGTAC TTTTTCTACAGGAAA TERM 2346 1773030 - 1773061 + r 77 -10.8 -3.34715 | gap 1, opp_overlap 1773021, overlap 1773028 ATACCAGGCCTCCGG GCAGTCGCTGGC-CG ATT CGCGCCAGCACCTGC TGTTTAAGGGCGCTA sufD 1774284 - 1773013 - | hypothetical protein TERM 2347 1773390 - 1773408 + gr 75 -6.6 -4.46073 | TGGTCTTGTGCGACT GGCGGCTG TTA CAGTAGCC TTTGTTATGTTCCAG sufC 1775005 - 1774259 - | putative ABC transport ATP-binding subunit TERM 2348 1774854 - 1774884 + g 70 -6.9 -4.07687 | gap 2, overlap 1774855 1774857 GTGACCTCATAATCT TCACG-TC-CCGCCA GGG TGGCGGAGAGCGTGC TTTTCCCGGAACCGT sufB 1776509 - 1775022 - | hypothetical protein TERM 2349 1776091 - 1776077 - G 74 -2.8 -4.89009 | AGACCGAATCAAAAA TCGC ATCGACG GCGA CCTCTTTCCCTTCGC sufA 1776886 - 1776518 - | hypothetical protein TERM 2350 1777685 - 1777707 + G 75 -6.9 -4.38712 | overlap 1777695 TTACTGACCGCTCAT GTGCTGGGG CTTGA CGCCAGCGC TTTTGTGCACATGCC SEN1677 1777313 - 1778659 + | putative transporter TERM 2351 1778716 - 1778686 - T 100 -12.7 -5.45802 | CCCGGAAAAGAAAAA CCCTTAAGTCTGT TCAAT ACAGGCTTAAGGG TTCCGGCCCCATCCG ydiH 1779174 - 1778947 - | hypothetical protein SEN1679 1779644 - 1779234 - | hypothetical protein ydiJ 1782697 - 1779641 - | conserved hypothetical FAD-binding protein TERM 2352 1780451 - 1780462 + g 76 -3 -5.01732 | CAGAGGTAAATCCAC CATA CCGA TATG TTTTTTCGCCAGATT TERM 2353 1781107 - 1781122 + g 80 -4.6 -5.07652 | GGTTAAGTCGATTAT GCGGAT CAAA AGCCGC TTTTATTTTGCGCAG TERM 2354 1782292 - 1782279 - G 81 -2.3 -5.40072 | TCCGGCGCAAAAAAA TAGCC ATAC GGCTT TAACGCTTGATTAAG ydiK 1782962 - 1784080 + | lipoprotein TERM 2355 1784083 - 1784109 + F 100 -15.8 -3.56862 | opp_overlap 1784082 1784081, overlap 1784073 1784084 1784086 CAAGCAGTCATAATC CCGTCGGGCGGC ATC GCCGCCCGATGC TTTAGCGACGTTTAT TERM 2356 1784084 - 1784108 + F 100 -19.3 -2.73635 | opp_overlap 1784082 1784081, overlap 1784083 1784073 1784086 AAGCAGTCATAATCC CGTCGGGCGGC ATC GCCGCCCGATG CTTTAGCGACGTTTA TERM 2357 1784086 - 1784106 + F 100 -18.3 -2.90992 | opp_overlap 1784082 1784081, overlap 1784084 1784083 1784073 GCAGTCATAATCCCG TCGGGCGGC ATC GCCGCCCGA TGCTTTAGCGACGTT TERM 2358 1784341 - 1784360 + F 100 -7.1 -6.17292 | CTGTGTGTAGTCTTT GCCCGTC TCCTAC GATGGGC TTTTTTTTTAACTTT TERM 2359 1784492 - 1784513 + F 100 -9.5 -5.21709 | GTCGAAACGGTGTCG GTGGTGCTA TTTA TAGCATCAC TTTTTTCATATAAAA ydiL 1784538 - 1784897 + | hypothetical protein TERM 2360 1785055 - 1785070 + G 76 -9 -4.02762 | overlap 1785050 GAAAAATCGTTATTT CCCTAC CGCT GTAGGG TTGTATTTTAATTAC ydiM 1785038 - 1786249 + | putative MFS-family transport protein TERM 2361 1786497 - 1786477 - f 72 -6.1 -4.26351 | opp_overlap 1786477 1786479 TATCAATGCAATAAA CCTGGCATT TTA AACGCCATG TTATGTACATATAAC TERM 2362 1787250 - 1787267 + G 74 -3.4 -4.88918 | overlap 1787251 CTCCCCTCGTCTGGC TGGAAG GCGTAG CTTCCG TTTTATTTGGCGTCG ydiN 1786613 - 1787848 + | Putative MFS-family transport protein ydiB 1787915 - 1788781 + | Shikimate 5-dehydrogenase aroD 1788826 - 1789584 + | 3-dehydroquinate dehydratase TERM 2363 1791075 - 1791064 - g 80 -4.4 -5.00616 | overlap 1791066 GGTCGCGTGAAAAAA TTCG TCAG CGAA CTGCCGGAAATTACG ydiF 1789738 - 1791333 + | putative acetyl CoA transferase ydiO 1791347 - 1792498 + | Putative acyl-CoA dehydrogenase ydiP 1793464 - 1792574 - | putative HTH-type transcriptional regulator TERM 2364 1793187 - 1793171 - G 76 -2.9 -5.08255 | ACCTGGAAAACAAAA CCCATAC AGC GCACAGG TATAGGTGGTAGCCG TERM 2365 1793448 - 1793428 - G 83 -7.5 -4.56597 | overlap 1793430 TGTCCTGTTCAAAAA TCGTCTCCG CGG CGGAGTCAA AACAGCGCTGATACA TERM 2366 1793792 - 1793803 + H 79 -4.4 -5.24531 | overlap 1793780 GGTTGCTAACGATTC TCTG TTCG CAGA TTTTTTGTGCAAGAT TERM 2367 1794528 - 1794518 - g 74 -2.4 -5.00616 | GGCGCCGGGAAAAAA GCCG TTA CGTC GTGGCTGGCGAGCGA ydiQ 1793927 - 1794691 + | putative electron transfer flavoprotein subunit ydiR 1794713 - 1795648 + | putative electron transfer flavoprotein subunit TERM 2368 1796779 - 1796766 - g 70 -3.1 -4.82901 | gap 1, overlap 1796767 1796768 CGCGCTGGAGAAAAA CGGCGT GTT ACGC-G ATATGCGGCATTTCC ydiS 1795705 - 1796991 + | putative electron transfer flavoprotein-quinone oxidoreductase ydiT 1796988 - 1797281 + | ferredoxin-like protein ydiD 1797519 - 1799159 + | putative ligase/synthetase TERM 2369 1799154 - 1799204 + T 72 -8.3 -3.73068 | gap 1, opp_overlap 1799161 1799162, overlap 1799164 CAGGAGCACACTGCG GTA-TAAATTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTATTACACTAC TTCTTCAGTTCCGCC TERM 2370 1799196 - 1799161 - T 100 -15.4 -3.86524 | opp_overlap 1799154 1799164, overlap 1799162 ACACTGCGGTATAAA TTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTAT TACACTACTTCTTCA TERM 2371 1799195 - 1799162 - T 100 -18.9 -2.91593 | opp_overlap 1799154 1799164, overlap 1799161 CACTGCGGTATAAAT TGCCGGATGGCGACG TTAA CGCCGCCATCCGGTA TTACACTACTTCTTC TERM 2372 1799164 - 1799193 + T 100 -19.3 -3.08283 | opp_overlap 1799162 1799161, overlap 1799154 CTGCGGTATAAATTG CCGGATGGCGACG TTAA CGCCGCCATCCGG TATTACACTACTTCT pps 1801579 - 1799201 - | phosphoenolpyruvate synthase TERM 2373 1799739 - 1799721 - G 74 -7.4 -4.19746 | TCCAGCGCAAAACAA TCGCGGAA ACT TTCTGCGA CGTAACGGCCCGCGC TERM 2374 1800136 - 1800162 + g 83 -7.2 -4.62336 | TGACCTTCAGCGGTA GCTCTGGCATGG TAT CTACGCTGGAGC TTTTTACGCTGAAAT ydiA 1801916 - 1802749 + | hypothetical protein TERM 2375 1803731 - 1803721 - g 71 -4.6 -4.62471 | opp_overlap 1803729 GGCAACTGTCAAAAA CAGC ATC GCCG CCAGCTGGAGGTATG aroH 1802905 - 1803951 + | 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase TERM 2376 1803957 - 1803979 + F 100 -15.6 -4.21631 | opp_overlap 1803954 CCGCTTTTAATAGCT CGCCCATCCT GCC GGGATGGGCG TTTCTTCGATGCGTT ydiE 1804108 - 1804299 + | hypothetical protein ydiU 1805776 - 1804334 - | hypothetical protein TERM 2377 1804871 - 1804885 + g 70 -10 -3.41878 | overlap 1804868 AATAAAAGGGGTTAA CGTCTG CGC CAGACG TTGTAAATTCCACAG TERM 2378 1805081 - 1805047 - G 84 -12.8 -3.35996 | opp_overlap 1805042 1805049, overlap 1805061 TATCCGTATTCATAA CGCCGTGCGAAAAACC GAC GGTTTGCCACTCGGCG ATGAGTCTTCCGGTA ydiV 1806551 - 1805838 - | hypothetical protein TERM 2379 1806656 - 1806667 + r 71 -7.2 -4.04789 | CATTTTTCTTGTTTA CCGG TGAA CCGG TTCCTTTTTTTAACT TERM 2380 1806724 - 1806741 + r 80 -6.9 -4.72986 | overlap 1806725 TGTTGTACTTTTCAC AGGGCGT GAAC ACGCCCG TTTTTAATAAAAGTA TERM 2381 1806725 - 1806740 + r 77 -10.4 -3.4331 | overlap 1806724 GTTGTACTTTTCACA GGGCGT GAAC ACGCCC GTTTTTAATAAAAGT nlpC 1807329 - 1806865 - | putative lipoprotein btuD 1808155 - 1807406 - | vitamin B12 ABC transport ATP-binding protein btuE 1808706 - 1808155 - | putative glutathione peroxidase/vitamin B12 transport periplasmic protein BtuE btuC 1809778 - 1808798 - | vitamin B12 transport system permease TERM 2382 1809840 - 1809866 + r 83 -13.8 -2.58861 | opp_overlap 1809846, overlap 1809846 TCCTTTACTTGAAAG AAAAAAGGCCGC AAT GCGGCCTTTTTA GTTATACGGGTCATC TERM 2383 1809846 - 1809860 + r 100 -12.8 -4.93365 | opp_overlap 1809846, overlap 1809840 ACTTGAAAGAAAAAA GGCCGC AAT GCGGCC TTTTTAGTTATACGG TERM 2384 1809860 - 1809846 - R 100 -12.8 -5.64421 | opp_overlap 1809840 1809846 ACTTGAAAGAAAAAA GGCCGC AAT GCGGCC TTTTTAGTTATACGG TERM 2385 1809938 - 1809897 - R 77 -11.7 -2.88544 | opp_overlap 1809884 1809899, overlap 1809899 TTTCAGGCTGACAGA TACGCTGTCATCCCG CTGATCTACTTT CGGGATGGCAGCGTA TCTGCCGCAATACAC TERM 2386 1809936 - 1809899 - R 70 -9.9 -2.99471 | opp_overlap 1809884 1809899, overlap 1809897 TCAGGCTGACAGATA CGCTGTCATCCCG CTGATCTACTTT CGGGATGGCAGCG TATCTGCCGCAATAC TERM 2387 1809899 - 1809936 + r 77 -12.1 -2.87564 | opp_overlap 1809897 1809899, overlap 1809884 TCAGGCTGACAGATA CGCTGTCATCCCG CTGATCTACTTT CGGGATGGCAGCG TATCTGCCGCAATAC himA 1810280 - 1809981 - | Integration host factor alpha-subunit pheT 1812672 - 1810285 - | Phenylalanyl-tRNA synthetase beta chain pheS 1813671 - 1812688 - | Phenylalanyl-tRNA synthetase alpha chain TERM 2388 1813765 - 1813735 - R 77 -12.1 -2.89564 | gap 1, opp_overlap 1813743, overlap 1813743 TCTCGATTTCAGATA CAAAAAAAGCCTCC ATCA GGAGGC-TTTTTTG CGCTGTTTTTCGTTT TERM 2389 1813758 - 1813743 - R 100 -10.4 -5.76633 | opp_overlap 1813743, overlap 1813735 TCAGATACAAAAAAA GCCTCC ATCA GGAGGC TTTTTTGCGCTGTTT TERM 2390 1813743 - 1813758 + r 100 -10.4 -5.10077 | opp_overlap 1813743 1813735 TCAGATACAAAAAAA GCCTCC ATCA GGAGGC TTTTTTGCGCTGTTT TERM 2391 1813963 - 1813941 - R 100 -12 -4.99568 | opp_overlap 1813943, overlap 1813943 GAACAGTAAATAAAA GAGAGGGAGC CAG GCTCCCTCTT TTCACTGGCTTATGC TERM 2392 1813961 - 1813943 - R 100 -14.6 -4.09862 | opp_overlap 1813943, overlap 1813941 ACAGTAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT TERM 2393 1813943 - 1813961 + r 100 -14.6 -4.21676 | opp_overlap 1813941 1813943 ACAGTAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT rplT 1814329 - 1813973 - | 50S ribosomal subunit protein L20 rpmI 1814577 - 1814380 - | 50S ribosomal subunit protein L35 TERM 2394 1814629 - 1814656 + r 72 -8.4 -3.81146 | opp_overlap 1814630 1814631, overlap 1814630 ACATAGGCGAACAAA ACCTGTGAAGCC CGAA GGCTTCACAGAA TTGTTACTTGAAGGC TERM 2395 1814655 - 1814630 - R 100 -14.1 -4.66987 | opp_overlap 1814629 1814630, overlap 1814631 CATAGGCGAACAAAA CCTGTGAAGCC CGAA GGCTTCACAGA ATTGTTACTTGAAGG TERM 2396 1814630 - 1814655 + r 77 -11.9 -2.88366 | opp_overlap 1814630 1814631, overlap 1814629 CATAGGCGAACAAAA CCTGTGAAGCC CGAA GGCTTCACAGA ATTGTTACTTGAAGG TERM 2397 1814654 - 1814631 - R 100 -15.4 -3.39469 | opp_overlap 1814630 1814629, overlap 1814630 ATAGGCGAACAAAAC CTGTGAAGCC CGAA GGCTTCACAG AATTGTTACTTGAAG infC 1815107 - 1814673 - | translation initiation factor IF-3 thrS 1817147 - 1815219 - | Threonyl-tRNA synthetase TERM 2398 1816218 - 1816228 + g 74 -2.4 -5.00616 | ATCTTTATAGTTGTC CCAG TGC CCGG TTTTTTCCCACAGCA TERM 2399 1816861 - 1816846 - G 70 -3.2 -4.80882 | overlap 1816848 ACGTCATAGTAAAAA CCGTTG TCGA CAACCG GGCCGATCGCCATTT TERM 2400 1817297 - 1817276 - H 72 -10.3 -2.88758 | overlap 1817266 1817278 ACAACCTTCGACACA GACGAAAAT CGCT ATTTTCGTC CGGCATGACGATGGT rfc 1818045 - 1819268 + | O-antigen polymerase TERM 2401 1819300 - 1819266 - T 83 -10 -4.02253 | opp_overlap 1819275, overlap 1819269 1819270 1819273 CTAAGAAGCGATAAA TAATTTATACGGCGGC AAT GCCGCCGTTTTATTTA GTTTTGGAGCGTAAA TERM 2402 1819297 - 1819269 - T 71 -7.3 -4.11906 | opp_overlap 1819275, overlap 1819266 1819270 1819273 AGAAGCGATAAATAA TTTATACGGCGGC AAT GCCGCCGTTTTAT TTAGTTTTGGAGCGT TERM 2403 1819296 - 1819270 - T 73 -10.8 -3.06059 | opp_overlap 1819275, overlap 1819269 1819266 1819273 GAAGCGATAAATAAT TTATACGGCGGC AAT GCCGCCGTTTTA TTTAGTTTTGGAGCG TERM 2404 1819293 - 1819273 - T 78 -12.5 -2.73799 | opp_overlap 1819275, overlap 1819270 1819269 1819266 GCGATAAATAATTTA TACGGCGGC AAT GCCGCCGTT TTATTTAGTTTTGGA TERM 2405 1819275 - 1819291 + T 100 -15.1 -5.08483 | opp_overlap 1819273 1819270 1819269 1819266 GATAAATAATTTATA CGGCGGC AAT GCCGCCG TTTTATTTAGTTTTG TERM 2406 1819843 - 1819822 - T 72 -10.3 -2.88758 | overlap 1819812 1819824 ACAACCTTCGACACA GACGAAAAT CGCT ATTTTCGTC CGGCATGACGATGGT SEN1713 1820807 - 1819953 - | Putative DNA/RNA non-specific endonuclease TERM 2407 1821182 - 1821211 + H 75 -10.1 -3.60798 | gap 1, opp_overlap 1821182 1821185, overlap 1821185 TATTTAAAGATTCAA TAAGCACTG-CGCA TCA TGCGGCTGTGCTTA TTACTTTGTAAAAAT TERM 2408 1821211 - 1821182 - H 71 -10.1 -3.24735 | gap 1, opp_overlap 1821182 1821185, overlap 1821185 TATTTAAAGATTCAA TAAGCACTG-CGCA TCA TGCGGCTGTGCTTA TTACTTTGTAAAAAT TERM 2409 1821185 - 1821208 + H 71 -7.4 -3.93401 | gap 1, opp_overlap 1821182 1821185, overlap 1821182 TTAAAGATTCAATAA GCACTG-CGCA TCA TGCGGCTGTGC TTATTACTTTGTAAA TERM 2410 1821734 - 1821716 - g 80 -5.2 -4.84761 | overlap 1821718 1821719 ATAGGCGCAGAAAAA TACCCTGC CTG GCAGGATC AAATTGAAAACCGTT TERM 2411 1821732 - 1821718 - g 71 -7.8 -4.04397 | overlap 1821716 1821719 AGGCGCAGAAAAATA CCCTGC CTG GCAGGA TCAAATTGAAAACCG SEN1715 1821260 - 1822219 + | putative outer membrane protein TERM 2412 1822260 - 1822238 - T 100 -17.8 -3.69395 | opp_overlap 1822228 1822234 1822232 GTCACCACGGAATAA CCGGGTTACG TAA CGTAACCCGG TACAATATTACATCT ydiY 1823026 - 1822268 - | putative outer membrane protein TERM 2413 1822893 - 1822903 + g 82 -5.4 -5.03314 | opp_overlap 1822873 1822893 CCCGCATTCAGATTA CCTT CAA AAGG TTTTTTCGCGGTGGA TERM 2414 1823070 - 1823054 - H 89 -6.5 -5.32944 | CGTACAACTAAAAAA GAGACCA CGA CGGTCCC GGAAACTTTCATAGG TERM 2415 1823605 - 1823573 - g 71 -10 -3.60098 | overlap 1823576 ACCGTCGATGCGAAA GAC-TGGACGCGTCAG AAC CTG-CACGTCCACGTC GAGTCCAGCGGCGAA pfkB 1823315 - 1824247 + | 6-phosphofructokinase isozyme TERM 2416 1824276 - 1824248 - f 86 -11.7 -3.61398 | overlap 1824249 CTTTCCGCGCAATAA TCGTATCCCCCTC GGC GAGGGGGATACCG GAAAATCGGTAACGG TERM 2417 1824275 - 1824249 - f 93 -15.2 -2.76696 | overlap 1824248 TTTCCGCGCAATAAT CGTATCCCCCTC GGC GAGGGGGATACC GGAAAATCGGTAACG TERM 2418 1824292 - 1824307 + F 78 -11.8 -3.01791 | GAAAATCGGTAACGG GCGGCG CATC CGCCGC TGTTAAAAACACAGT TERM 2419 1824433 - 1824443 + G 78 -2.4 -5.16237 | CTCAATAATCATCTG ACGC GCA GCGG TTTTTTGCTGACATT TERM 2420 1824569 - 1824541 - g 86 -10.3 -4.10552 | opp_overlap 1824500 1824499 1824540 GCTGATGAAATCAAA GCGCTTGTCGC CGGACTT GCGAAAAGCGC ATTAGATAAGGATGT ydiZ 1824343 - 1824633 + | hypothetical protein TERM 2421 1824916 - 1824891 - g 77 -8.3 -4.08144 | gap 1, opp_overlap 1824884 1824898, overlap 1824884 1824892 GCGATGAACGAGAAA TGCTTC-GCGGT TTT ACCGCTGAAGCC GATCAGCTGGAGCTG TERM 2422 1824915 - 1824892 - g 76 -11.8 -3.04404 | gap 1, opp_overlap 1824884 1824898, overlap 1824884 1824891 CGATGAACGAGAAAT GCTTC-GCGGT TTT ACCGCTGAAGC CGATCAGCTGGAGCT SEN1719 1824740 - 1825600 + | hypothetical protein TERM 2423 1825611 - 1825633 + T 100 -12.1 -4.81851 | TATAGGTACAGCCCA TGCCGGATA CGGGC TATCCGGCA TTTTTCAGTTTACAT yniB 1826179 - 1825643 - | hypothetical protein TERM 2424 1826876 - 1826891 + G 72 -11.8 -2.64099 | opp_overlap 1826873 1826874, overlap 1826875 AATCGCGGCAAAGGC GGCGCG AATG CGCGCC ATTGTGGTGCCAGCA yniC 1826328 - 1826996 + | putative hydrolase TERM 2425 1827155 - 1827167 + G 86 -4.1 -5.36441 | TTTATCATGACGGCG GAAGG ACA TCTTC TTTTTTCTATAGCCA TERM 2426 1827354 - 1827335 - g 70 -9.2 -3.66095 | opp_overlap 1827348 AAATGGGTATCGAAA CCGATCGC CCGC GCGTTCGG TCACCGGGGGTTTAC ydjM 1827134 - 1827733 + | hypothetical protein TERM 2427 1828402 - 1828391 - g 75 -5.8 -4.65895 | TTTTGTACCGAAAAA TCCG TTTG CGGA TCTGACTGGCGCAAA ydjN 1827870 - 1829261 + | putative sodium:dicarboxylate symporter TERM 2428 1829325 - 1829355 + T 100 -9.8 -5.84381 | opp_overlap 1829330 AAAATGTCTGTCACT AAAAACGCCGGT CTCCAGT ACCGGCGTTTTG TTTTTTTCTTAGTCA TERM 2429 1829350 - 1829330 - T 93 -9.7 -4.72272 | opp_overlap 1829325 GTCTGTCACTAAAAA CGCCGGT CTCCAGT ACCGGCG TTTTGTTTTTTTCTT cedA 1829606 - 1829364 - | cell division activator CedA TERM 2430 1830142 - 1830110 - g 70 -9.8 -3.33696 | gap 1 CGGGCGCGCAACCAA CGGCCCCCGGCAGCT TAAA AGC-GCCCGAGACCG CGAATGATAAGCTCA TERM 2431 1830906 - 1830889 - g 74 -3.3 -4.88736 | opp_overlap 1830893, overlap 1830891 1830893 GATGAGTCACAAAAA CTGACCG GTCG CGATCCG GATTTTCACCGCCGG TERM 2432 1831387 - 1831365 - g 77 -11.2 -3.54029 | overlap 1831379 1831380 CTCCATTAATGACAA CTGGCCGCGC GAA ACGCCGCCAG CGCCAAAACGCGGCG katE 1829971 - 1832223 + | catalase HPII TERM 2433 1832254 - 1832225 - T 74 -8.7 -3.86346 | gap 1, overlap 1832235 CGATTCCTGCATAAA CGGCA-AAAAATGC GGC GCATTCTTGCGCCG CAAACTCAGGAGCTA TERM 2434 1832256 - 1832235 - T 100 -15.9 -5.1361 | overlap 1832225 ATAAACGGCAAAAAA TGCGGCGCA TTCT TGCGCCGCA AACTCAGGAGCTAAA SEN1726 1833025 - 1832267 - | hypothetical protein celF 1834393 - 1833038 - | phospho-beta-glucosidase B TERM 2435 1834405 - 1834421 + r 70 -9.5 -3.10513 | TCATAATATCTCCCT TCAGTGT ATG ACACTGA TATGTATTACGCTAT celD 1835282 - 1834518 - | putative cel operon repressor celC 1835718 - 1835371 - | phosphoenolpyruvate dependent phosphotransferase enzyme III-cellobiose TERM 2436 1835733 - 1835767 + r 95 -12.9 -3.72363 | gap 1, overlap 1835734 TAGTCTTTCCTCTGA TTCAGC-CCGGCATGG CATC CCATGCCGGCGCGGAG TTTAGAATTTCAGTG TERM 2437 1835734 - 1835766 + r 84 -14.2 -2.82936 | gap 1, overlap 1835733 AGTCTTTCCTCTGAT TCAGC-CCGGCATGG CATC CCATGCCGGCGCGGA GTTTAGAATTTCAGT celB 1837127 - 1835769 - | PTS system, cellobiose-specific IIC component TERM 2438 1836847 - 1836831 - G 85 -4.3 -5.252 | CATGCCGATAAAAAA TGGCGCC ATG AGCGACA TAATGCCCAATGTGC TERM 2439 1837167 - 1837145 - R 72 -9.2 -3.64192 | opp_overlap 1837147, overlap 1837147 AAAAATACCCTTAAA TACCGCAATA AAA TATTGCGGTT AGTGTATGAAATAAC TERM 2440 1837147 - 1837165 + r 82 -11.8 -3.32498 | opp_overlap 1837145 1837147 AAATACCCTTAAATA CCGCAATA AAA TATTGCGG TTAGTGTATGAAATA TERM 2441 1837165 - 1837147 - R 82 -11.8 -3.38603 | opp_overlap 1837147, overlap 1837145 AAATACCCTTAAATA CCGCAATA AAA TATTGCGG TTAGTGTATGAAATA celA 1837530 - 1837210 - | PTS system, cellobiose-specific IIB component TERM 2442 1837784 - 1837799 + r 74 -8.2 -3.95817 | opp_overlap 1837784 GCAGGCACAAAAAAA CCGGCT CGCA GGCCGG TTTCCTTGAATGTTC TERM 2443 1837799 - 1837784 - R 100 -7.5 -5.64274 | opp_overlap 1837784 GCAGGCACAAAAAAA CCGGC TCGCAG GCCGG TTTCCTTGAATGTTC osmE 1838172 - 1837831 - | osmotically inducible lipoprotein E precursor nadE 1838391 - 1839218 + | glutamine-hydrolysing NAD+ synthase SEN1734 1839312 - 1840220 + | hypothetical protein TERM 2444 1840275 - 1840227 - T 100 -11.7 -5.0065 | opp_overlap 1840227 1840267 CAGTCATAAAGAAAA CCGCCGATCCTGTCCACCTCA ACGATTG TGTTGTCGACAAGACCGGCGG TCTTAAATTATGCGG spy 1840780 - 1840295 - | hypothetical protein astE 1842084 - 1841116 - | succinylglutamate desuccinylase astB 1843420 - 1842077 - | succinylarginine dihydrolase TERM 2445 1843233 - 1843218 - G 75 -6 -4.64334 | overlap 1843219 AACGCCGGAATAAAA GGCCGC TCAT GCGGCG GGATCACCGCCTGGA TERM 2446 1843232 - 1843219 - G 70 -9.5 -3.37877 | overlap 1843218 ACGCCGGAATAAAAG GCCGC TCAT GCGGC GGGATCACCGCCTGG astD 1844895 - 1843417 - | succinylglutamic semialdehyde dehydrogenase TERM 2447 1844165 - 1844145 - G 70 -9 -3.64487 | opp_overlap 1844145 CCACATCCTCAATAA TGAGCGGA TTGTT TCCGCCCA TTTCAAGGGCCAGTA astA 1845926 - 1844892 - | arginine N-succinyltransferase TERM 2448 1845364 - 1845352 - G 79 -3.3 -5.26316 | GTACCGCATAAAAAA TCCGC CCG GCTGA AATCCATAGAAAAAA astC 1847143 - 1845917 - | succinylornithine transaminase TERM 2449 1847102 - 1847079 - G 74 -4.4 -4.75472 | CGTACAGGAATAAAA GGCGCGGGAA CATA TACCGGCACC ATCCATTCATCAAAG xthA 1847589 - 1848395 + | exodeoxyribonuclease III SEN1742 1848468 - 1848884 + | putative MutT-family protein SEN1743 1849119 - 1848844 - | hypothetical protein TERM 2450 1849433 - 1849405 - g 73 -6 -4.44915 | gap 1 CAACCATGTACAAAA GCGCG-ACCCG CATCAAAC CGAGTTCGCGC AAGCCGTCCGTGAAG TERM 2451 1849597 - 1849573 - g 77 -4.9 -4.91109 | overlap 1849588 1849589 GCTGGACGACAAAAA CCAGGTGCA GGTAAAT CGCGCCTGG CGCGTGCAGTTCAAC TERM 2452 1850485 - 1850468 - g 71 -9.8 -3.53012 | TTTGCGCCGGGTAAA GCCGCC AACGCG GGCGGC GTGGCGACATCAGGG TERM 2453 1850671 - 1850696 + G 70 -8.9 -3.75169 | opp_overlap 1850666, overlap 1850672 1850674 TTTCGTGAAAGTCGC CGACGCCATGC TGGC GCAGGGCGTCA TTTAATCCCGTCGTC TERM 2454 1850672 - 1850695 + G 72 -12.4 -2.8478 | opp_overlap 1850666, overlap 1850671 1850674 TTCGTGAAAGTCGCC GACGCCATGC TGGC GCAGGGCGTC ATTTAATCCCGTCGT gdhA 1849358 - 1850701 + | NADP-specific glutamate dehydrogenase TERM 2455 1850746 - 1850768 + T 95 -7.6 -5.41143 | overlap 1850705 1850744 1850763 TTATTCGGTCTGACG GCCTGTCTCC TCA GCAGGCGGGC TTTTTTTGCCCGCTC topB 1852680 - 1850731 - | DNA topoisomerase III TERM 2456 1850776 - 1850798 + g 75 -6.9 -4.39746 | gap 1, overlap 1850763 AGGCGGGCTTTTTTT GCCCGCTCGC TTAC GCG-GCGCGC TCTTTTTCTTTTCTC TERM 2457 1851292 - 1851304 + g 74 -6.9 -4.30576 | opp_overlap 1851286 GGCGACAACCGGCAG CGGCG TAC CGTCG TTTTCCTCGTCGCGC TERM 2458 1851535 - 1851549 + g 84 -2.8 -5.31275 | opp_overlap 1851513, overlap 1851509 CGTCGGGATAATCGC GTGG TGCGCAT CCAC TTTTTTGTCATCCCA selD 1853728 - 1852685 - | selenophosphate synthase TERM 2459 1853792 - 1853830 + r 70 -5.3 -4.42386 | gap 1, opp_overlap 1853789 ATGTGGTAAGTATCA CTGTCTGAATTACCGCGC CTTT GCTCAG-AATCCAGACAG TTTTATCCCTCAGCG ydjA 1854397 - 1853846 - | putative nitroreductase TERM 2460 1854083 - 1854101 + g 70 -3 -4.6971 | overlap 1854079 1854078 AGACATCTCCTGTTC CCACACGG GAA CCTTATGG TTTTCTTCGCATTTC TERM 2461 1854141 - 1854163 + g 74 -4.8 -4.69027 | opp_overlap 1854133 GTAATGATCAGCGGC GCGCGAAA CGGCGAA TTACGCGC TTTTTCGATCGCTTT sppA 1854571 - 1856427 + | protease IV TERM 2462 1857242 - 1857228 - g 70 -7 -4.09685 | opp_overlap 1857226 1857228 CGTCAGCCGGTAAAA GCGCTG ATT CTGCGC TCTTATGGCGTAGGC ansA 1856523 - 1857539 + | L-Asparaginase I pncA 1857566 - 1858222 + | pyrazinamidase/nicotinamidase SEN1751 1859683 - 1858325 - | Putative metabolite transport protein SEN1752 1860643 - 1859819 - | Putative DEOR-type transcriptional regulator SEN1753 1861690 - 1860707 - | putative oxidoreductase TERM 2463 1861275 - 1861265 - G 80 -4.6 -5.01732 | opp_overlap 1861273, overlap 1861266 AATCGGCGTAAAAAA CGGC GGT ACCG ACTGCCAGTGGGTCA TERM 2464 1861458 - 1861468 + g 77 -4 -5.0133 | overlap 1861454 TCCACCACCATCTCG TTAC GCG GTAA TTTTTTCAGCGCCTG SEN1754 1862647 - 1861700 - | putative sugar kinase SEN1755 1863488 - 1862652 - | putative aldolase SEN1756 1864553 - 1863510 - | putative oxidoreductase TERM 2465 1864270 - 1864257 - G 70 -9.5 -3.31726 | overlap 1864255 TCCTTCCAGACAATA GCGGC AGTG GCCGC ACGGCACGCCCGGCT TERM 2466 1864542 - 1864552 + g 81 -4 -5.25906 | TTTTAGTATCGCTTT TGAA TTT TTCA TTTTTATTCCTTTAT SEN1757 1865943 - 1864564 - | Putative membrane transport protein TERM 2467 1865196 - 1865210 + g 70 -9.2 -3.69216 | opp_overlap 1865195, overlap 1865197 1865200 1865202 AATACGGTACGGAAC GCGGCG GCT TGCCGC TGTTTTCAATAACAA TERM 2468 1865197 - 1865212 + g 77 -8.2 -4.18018 | opp_overlap 1865195, overlap 1865196 1865200 1865202 ATACGGTACGGAACG CGGCGG CTTG CCGCTG TTTTCAATAACAACC TERM 2469 1865915 - 1865925 + g 95 -8.2 -4.90002 | overlap 1865912 CGATCCAGCCGGGCG CCGC AGT GCGG TTTTGTTATCTGTTC SEN1758 1867046 - 1865970 - | putative oxidoreductase TERM 2470 1867290 - 1867308 + r 70 -5.2 -4.46775 | overlap 1867287 CGGTTATTTTTTCGC CACTCCAT TCT GTGGCGTG TTTCTGTTTTAGATG TERM 2471 1867751 - 1867734 - R 76 -4.8 -4.82667 | gap 1 GGACCAGATTAAAAA GCG-CGG ACTGG CCGGCGC AATGTTCTGGGAATA TERM 2472 1867918 - 1867905 - R 80 -9.5 -3.91084 | opp_overlap 1867901 1867900 1867915 GCATTGGCAATGAAA CCGCC GGAT GGCGG CTACCTCTTATCCGG yeaC 1868218 - 1867940 - | hypothetical protein yeaA 1868703 - 1868260 - | hypothetical protein TERM 2473 1868311 - 1868299 - G 71 -6.2 -4.36914 | opp_overlap 1868310, overlap 1868301 TTTCTCGTCAGAAAA GGCC AGCGA GGCC GAGTTAACGCAATAG TERM 2474 1868440 - 1868426 - G 72 -2.1 -4.91511 | ATGCCATGAGAAAAA TCGTC TATGT AACGA ATCGCCTCTTCGCTG TERM 2475 1868943 - 1868959 + H 72 -2.9 -5.09245 | ATTGACACGATTCCG CTTGACG CTG CGTAAGG TTTTTGTAATTTTAC gapA 1869015 - 1870010 + | glyceraldehyde 3-phosphate dehydrogenase A TERM 2476 1870036 - 1870053 + F 100 -11.3 -5.95166 | opp_overlap 1870038 CACAGTCATTGGTAA GAGCGAC TCAG GTCGCTC TTTTTTTTGCTTAAA yeaD 1870339 - 1871223 + | hypothetical protein SEN1764 1872170 - 1871322 - | putative oxidoreductase SEN1765 1873472 - 1872276 - | putative regulatory protein TERM 2477 1872892 - 1872871 - G 74 -8 -3.97689 | gap 1, overlap 1872861 GATAACGTCAAAGAA CGCT-GCGC TTTTT GCGCGAGCG GCTCAACAATGGGAA TERM 2478 1873278 - 1873265 - G 74 -3.1 -4.85782 | gap 1 TTTGGTAAAAAGAAA GACCGC ATA GCG-TC GGCTCTCCCCCCTGC TERM 2479 1873703 - 1873739 + r 78 -6.6 -4.57341 | opp_overlap 1873713, overlap 1873707 1873713 ATGTTCGCGTTTCAG TTAGCACAAAGCCTGC ATAAC GCAGGCTTTGTCATGG TTTTTCCGGCAAATT TERM 2480 1873707 - 1873735 + r 76 -11.8 -2.53903 | opp_overlap 1873713, overlap 1873703 1873713 TCGCGTTTCAGTTAG CACAAAGCCTGC ATAAC GCAGGCTTTGTC ATGGTTTTTCCGGCA TERM 2481 1873713 - 1873729 + r 79 -9.4 -4.06719 | opp_overlap 1873713, overlap 1873707 1873703 TTCAGTTAGCACAAA GCCTGC ATAAC GCAGGC TTTGTCATGGTTTTT TERM 2482 1873729 - 1873713 - R 80 -10.1 -3.97947 | opp_overlap 1873713 1873707 1873703 TTCAGTTAGCACAAA GCCTGCA TAA CGCAGGC TTTGTCATGGTTTTT mipA 1874508 - 1873762 - | putative outer membrane protein TERM 2483 1875898 - 1875885 - g 74 -4.5 -4.72127 | opp_overlap 1875890, overlap 1875890 TAACAATAAAAATAA CGAAG CGTT CCTCG ACCGTGTCTATATCG yeaG 1874935 - 1876869 + | putative serine kinase TERM 2484 1877426 - 1877414 - g 76 -3.3 -5.10208 | TAATCTGAAGAAAAA CCAGC ATC GCCAG CTTAACGAGTATAAA TERM 2485 1877742 - 1877718 - g 77 -4.2 -4.88129 | gap 1, opp_overlap 1877718 1877721, overlap 1877720 AAAAATTATGAAAAA CGGCCTGAGCC CTCC AGC-CAGGCGG TGATGTTCTGTCTGA TERM 2486 1877901 - 1877912 + G 71 -4.4 -4.63218 | GCGAAGGAAGTGGAC GAAC ATGA GTTC TTTTATTCGCAAGAG yeaH 1876992 - 1878278 + | hypothetical protein TERM 2487 1878284 - 1878308 + F 87 -10 -4.26076 | opp_overlap 1878284 AAGCGTATAAATAAA TCCGCCCG TTCATATGT CGGGCGGA TTTTAATAAACCTGG TERM 2488 1878308 - 1878284 - f 93 -10 -4.56969 | opp_overlap 1878284 AAGCGTATAAATAAA TCCGCCCG TTCATATGT CGGGCGGA TTTTAATAAACCTGG TERM 2489 1879173 - 1879155 - g 80 -5.2 -4.85599 | opp_overlap 1879161 GTCACTGCAGAAAAA CGCCGC GCGTTTT GCGACG CCTTTGAGGCTATTA yeaJ 1878918 - 1880411 + | membrane protein yeaK 1880461 - 1880979 + | hypothetical protein TERM 2490 1881644 - 1881612 - g 81 -12 -3.60296 | gap 1, opp_overlap 1881619 TACGCTGATGGGAAA CCAACC-GCAGCTCG TCGC CGGGCTGCTGGTCGG TACGGTACTTGGCGT yeaL 1881289 - 1881735 + | hypothetical protein yeaM 1882509 - 1881715 - | putative transcriptional regulator TERM 2491 1881753 - 1881774 + g 100 -11.5 -5.03715 | opp_overlap 1881751 CGCCCGTCAGATACT GGCCTGGCG TCTG CCCCAGGCC TTTTTTAAACATGGT yeaN 1882610 - 1883794 + | hypothetical protein yeaO 1883913 - 1884260 + | putative bacteriophage protein SEN1775 1884557 - 1884246 - | hypothetical protein TERM 2492 1884383 - 1884395 + g 80 -10.5 -3.91716 | opp_overlap 1884377 CCGTAACCAGCCACA GCGCC CGA GGCGC TTCTTTCGGCAGTAA yaoF 1884877 - 1884626 - | hypothetical protein TERM 2493 1885261 - 1885291 + r 87 -14.3 -2.90219 | opp_overlap 1885264 1885268, overlap 1885264 1885268 TAAATTCATTTTGAA TAATAAAGGCTAC CTGTC GTAGCCTTTATTA TCTCTGAAAGTTCTG TERM 2494 1885288 - 1885264 - R 86 -11.6 -3.63694 | opp_overlap 1885261 1885264 1885268, overlap 1885268 ATTCATTTTGAATAA TAAAGGCTAC CTGTC GTAGCCTTTA TTATCTCTGAAAGTT TERM 2495 1885264 - 1885288 + r 86 -11.6 -3.5947 | opp_overlap 1885264 1885268, overlap 1885261 1885268 ATTCATTTTGAATAA TAAAGGCTAC CTGTC GTAGCCTTTA TTATCTCTGAAAGTT TERM 2496 1885268 - 1885284 + r 79 -8 -4.42974 | opp_overlap 1885264 1885268, overlap 1885264 1885261 ATTTTGAATAATAAA GGCTAC CTGTC GTAGCC TTTATTATCTCTGAA TERM 2497 1885284 - 1885268 - R 79 -8 -4.45068 | opp_overlap 1885268 1885264 1885261, overlap 1885264 ATTTTGAATAATAAA GGCTAC CTGTC GTAGCC TTTATTATCTCTGAA yeaQ 1885558 - 1885310 - | hypothetical protein SEN1778 1885751 - 1885566 - | hypothetical protein TERM 2498 1885794 - 1885815 + r 100 -12.3 -5.52384 | gap 1 CTTCCAGTATTATTT GCCCGC-CTC ACC GAGTGCGGGC TTTTTTTGCTAACCG SEN1779 1886513 - 1885872 - | hypothetical protein TERM 2499 1886694 - 1886666 - R 100 -13.9 -4.74706 | opp_overlap 1886665 1886666 TTCAATACGCAAAAA CCGCATCACGC TGGCGAC GCGCGATGCGG CTTCTGATTTAAAAA TERM 2500 1886666 - 1886694 + r 76 -11.7 -2.75769 | opp_overlap 1886666, overlap 1886665 TTCAATACGCAAAAA CCGCATCACGC TGGCGAC GCGCGATGCGG CTTCTGATTTAAAAA yoaG 1886925 - 1886743 - | hypothetical protein yeaR 1887290 - 1886928 - | hypothetical protein TERM 2501 1887456 - 1887433 - R 77 -10.2 -3.35344 | overlap 1887434 1887436 CCGAAAGGAGAGCAA TGACCCGCCG TTGA CGACGGGTCC GGGAGGGTTAAGACT TERM 2502 1887455 - 1887434 - R 83 -13.7 -2.60725 | overlap 1887433 1887436 CGAAAGGAGAGCAAT GACCCGCCG TTGA CGACGGGTC CGGGAGGGTTAAGAC TERM 2503 1887453 - 1887436 - R 72 -10.5 -2.83634 | overlap 1887434 1887433 AAAGGAGAGCAATGA CCCGCCG TTGA CGACGGG TCCGGGAGGGTTAAG yeaS 1888102 - 1887464 - | putative membrane transport protein SEN1783 1888844 - 1888299 - | putative chorismate mutase TERM 2504 1888419 - 1888377 - G 100 -17 -3.72695 | overlap 1888399 1888414 ATTCGGCGCATTAAA CTGCGCTCTCAGCCACACCA TAT CGTCGTGGCTGAAAGCGCCG ACCATCAAGCGCTGG TERM 2505 1889035 - 1889022 - H 70 -5.3 -4.5002 | opp_overlap 1889022 1889032, overlap 1889032 AAAATATACAACAAA TCACA CAAA TGTGA TGCATATCACGTTTT TERM 2506 1889022 - 1889055 + H 86 -4.7 -5.4756 | opp_overlap 1889022 1889032, overlap 1889032 AAAATATACAACAAA TCACACAAATGTGAT GCAT ATCACGTTTTTATGA TTTTTTATTACAGTT SEN1785 1889160 - 1889408 + | hypothetical protein TERM 2507 1889519 - 1889497 - T 73 -11.4 -2.71144 | opp_overlap 1889494 1889501, overlap 1889501 GACTGGGGTGAACGA CAAATCTGCC GGG AGCAGATTTG AACGTCGCTTGCGAC TERM 2508 1889616 - 1889640 + T 82 -12.1 -3.41693 | opp_overlap 1889616 1889619, overlap 1889619 TATGAAGGGTATAAA CAAGGGAGGGG TTA CTCCTCCCCTG TTCGTTAATAATGCA TERM 2509 1889640 - 1889616 - T 95 -12.1 -3.93236 | opp_overlap 1889616 1889619, overlap 1889619 TATGAAGGGTATAAA CAAGGGAGGGG TTA CTCCTCCCCTG TTCGTTAATAATGCA TERM 2510 1889619 - 1889637 + T 78 -12.4 -2.56164 | opp_overlap 1889616 1889619, overlap 1889616 GAAGGGTATAAACAA GGGAGGGG TTA CTCCTCCC CTGTTCGTTAATAAT TERM 2511 1889637 - 1889619 - T 87 -10.2 -4.08948 | opp_overlap 1889619 1889616, overlap 1889616 GAAGGGTATAAACAA GGGAGGGG TTA CTCCTCCC CTGTTCGTTAATAAT SEN1786 1890510 - 1889662 - | putative transcriptional regulator TERM 2512 1890436 - 1890395 - G 80 -4.3 -5.10461 | overlap 1890398 TCTATGCAATAAAAA CGATTGCCAGCTTCATCTT TGGT AGGTTGAAGCAGGCCATAG CGTTCCCAGGACCTG SEN1787 1891172 - 1890579 - | putative regulatory protein TERM 2513 1890872 - 1890855 - G 77 -4.1 -5.02074 | TGACCTGGGAAAAAA TTGACCA GCAG CGGCCAA AATTAGTAATTCGCG aadA 1892105 - 1891317 - | aminoglycoside-resistance protein TERM 2514 1892174 - 1892193 + r 73 -7.8 -4.19506 | opp_overlap 1892174 AACGGCAGAAAAAAA GCCCGCTA TTCA TAGCGAGC TTTTAACATTGCAAT TERM 2515 1892193 - 1892174 - R 100 -10 -5.63504 | opp_overlap 1892174 AACGGCAGAAAAAAA GCCCGCTA TTCA TAGCGAGC TTTTAACATTGCAAT SEN1789 1892861 - 1892214 - | hypothetical protein TERM 2516 1892875 - 1892895 + r 87 -11.3 -4.00486 | opp_overlap 1892869 ACCAAAACGTTACCC TCATCTTTC TTA GAAAGATGA TTGTTATATTATAAC TERM 2517 1892939 - 1892957 + r 100 -11.7 -5.21709 | opp_overlap 1892937 1892933 CAACAGAAACTCAGC GGCCACC GCGCA GGTGGCC TTTTTTGATATCAAC SEN1790 1893384 - 1893058 - | hypothetical protein TERM 2518 1893437 - 1893458 + H 83 -10.1 -4.02953 | opp_overlap 1893434, overlap 1893435 CTGCACAGAAACGCC GGGATAGCC AAAC GGCTACCCC TCTTTTTCATACTTT SEN1791 1893578 - 1894711 + | hypothetical protein TERM 2519 1894752 - 1894727 - T 83 -13.3 -3.29043 | opp_overlap 1894729, overlap 1894714 1894729 AATCTCTGCCGACAA TACCGGGAACC CATG GGTTCCCGGTG CGTTAACGGCGACAC TERM 2520 1894729 - 1894750 + T 90 -15.9 -2.52464 | opp_overlap 1894727 1894714 1894729 TCTCTGCCGACAATA CCGGGAACC CATG GGTTCCCGG TGCGTTAACGGCGAC TERM 2521 1894750 - 1894729 - T 100 -15.9 -3.21276 | opp_overlap 1894729, overlap 1894727 1894714 TCTCTGCCGACAATA CCGGGAACC CATG GGTTCCCGG TGCGTTAACGGCGAC SEN1792 1895383 - 1894793 - | putative ABC transport ATP-binding subunit TERM 2522 1894982 - 1894962 - G 71 -4.6 -4.5442 | TCGGCAATCAGAAAA CGCGTTCG TGGGT CAAGCGCG CGCAGTATCGCAATA SEN1793 1896174 - 1895377 - | putative ABC transport ATP-binding protein SEN1794 1896980 - 1896168 - | putative inner membrane transport protein TERM 2523 1896750 - 1896731 - G 75 -11.4 -3.31792 | gap 1, opp_overlap 1896720 1896746 TCACTAGCGCGATAA CGCCGCTGC ACA GC-GCGGCG CCAACGCCAATTTGT SEN1795 1897944 - 1896970 - | putative inner membrane transport protein TERM 2524 1897904 - 1897875 - G 73 -6.3 -4.48175 | overlap 1897879 AAAAGCTAAGCAAAA TGAAGGTGCCGGC AGCC ACCAGCACCAACA GAATAATCAGCCGCA TERM 2525 1897900 - 1897879 - G 74 -10.1 -3.75718 | overlap 1897875 GCTAAGCAAAATGAA GGTGCCGGC AGCC ACCAGCACC AACAGAATAATCAGC SEN1796 1899578 - 1897944 - | putative substrate-binding transport protein TERM 2526 1899007 - 1899022 + g 79 -3.2 -5.1861 | overlap 1899008 GGACCGGCGCCTATC GGTTCG CGGG CGAACG TTTTTTCATCATAAC TERM 2527 1900200 - 1900229 + H 71 -3.5 -4.76274 | opp_overlap 1900204, overlap 1900201 1900204 TACACCACTTTTTTA ATGACTGTCCGGA CATT TTCGGACGGTAAG TTTTCTATTAATTTA SEN1797 1900260 - 1900574 + | putative lipoprotein TERM 2528 1900607 - 1900578 - f 76 -8.5 -4.05607 | opp_overlap 1900584, overlap 1900580 1900584 AGAGGACAATAACAA CAGTAAGCCGGCG ATGC CGCCGGCTTTTTA TCCCATTTTACGTGC TERM 2529 1900605 - 1900580 - f 72 -8.9 -3.60967 | opp_overlap 1900584, overlap 1900578 1900584 AGGACAATAACAACA GTAAGCCGGCG ATGC CGCCGGCTTTT TATCCCATTTTACGT TERM 2530 1900601 - 1900584 - f 93 -14.1 -3.50302 | opp_overlap 1900584, overlap 1900580 1900578 CAATAACAACAGTAA GCCGGCG ATGC CGCCGGC TTTTTATCCCATTTT TERM 2531 1900584 - 1900601 + F 100 -14.1 -4.90296 | opp_overlap 1900584 1900580 1900578 CAATAACAACAGTAA GCCGGCG ATGC CGCCGGC TTTTTATCCCATTTT SEN1798 1900723 - 1901253 + | putative cytochrome TERM 2532 1901261 - 1901297 + T 80 -10.1 -3.9461 | gap 1, opp_overlap 1901281, overlap 1901262 AATCATGACTATTTC GGCCAT-CCCGGCGTG AGAGAG CACGCCGGGCAAGGCA TTATTATTCCAGCGC TERM 2533 1901262 - 1901296 + T 85 -13.6 -2.96444 | gap 1, opp_overlap 1901281, overlap 1901261 ATCATGACTATTTCG GCCAT-CCCGGCGTG AGAGAG CACGCCGGGCAAGGC ATTATTATTCCAGCG SEN1799 1902379 - 1901336 - | hypothetical protein TERM 2534 1902154 - 1902140 - G 74 -7.8 -4.18506 | CGACGGGTAAAATAA CACCGG ATT CCAGTG CGCTTCCCCCTCGCG TERM 2535 1902708 - 1902683 - R 100 -17.7 -3.12351 | opp_overlap 1902674 1902687, overlap 1902687 TTTCGCTACAGGCAA TGAAGGCCCGT CTAA ACGGGCCTTCA TTAACGCGATTATGA TERM 2536 1902704 - 1902687 - R 85 -12.7 -3.39142 | opp_overlap 1902674 1902687, overlap 1902683 GCTACAGGCAATGAA GGCCCGT CTAA ACGGGCC TTCATTAACGCGATT TERM 2537 1902687 - 1902704 + r 85 -12.7 -3.34192 | opp_overlap 1902687 1902683, overlap 1902674 GCTACAGGCAATGAA GGCCCGT CTAA ACGGGCC TTCATTAACGCGATT SEN1800 1903185 - 1902718 - | putative heat shock protein SEN1801 1903610 - 1903338 - | hypothetical protein TERM 2538 1903473 - 1903490 + g 77 -8.3 -4.07885 | opp_overlap 1903469 1903472, overlap 1903474 CATTATCAAACCCAG CGCCGCC TTCG GGCGGCC TTTTGGGAGGAAATA TERM 2539 1903474 - 1903489 + g 76 -11.8 -3.04517 | opp_overlap 1903469 1903472, overlap 1903473 ATTATCAAACCCAGC GCCGCC TTCG GGCGGC CTTTTGGGAGGAAAT TERM 2540 1903770 - 1903744 - H 70 -9.3 -3.41125 | overlap 1903745 TTTATACACCTACAA TTTGCGCCCGG CGGCT CCGGGCGCCAT ACCTAAAGATATGAC TERM 2541 1903769 - 1903745 - H 78 -12.8 -2.64354 | overlap 1903744 TTATACACCTACAAT TTGCGCCCGG CGGCT CCGGGCGCCA TACCTAAAGATATGA SEN1802 1904313 - 1904657 + | putative secreted protein TERM 2542 1904668 - 1904688 + T 79 -9.7 -3.66356 | opp_overlap 1904668 ACTAACCTTAAGAAA TGCCTGAAG ACT CATCAGGCA TTTCCACTTCAACCT TERM 2543 1904688 - 1904668 - T 87 -9.7 -4.21319 | opp_overlap 1904668 ACTAACCTTAAGAAA TGCCTGAAG ACT CATCAGGCA TTTCCACTTCAACCT TERM 2544 1904927 - 1904959 + T 82 -13.4 -3.05384 | opp_overlap 1904874 1904927 ACGATCACCAGCCAA CCGCGCCAGGGTCT TGCAT ACGCTCTGGCGCGG TTAAATCCCCAGGCC TERM 2545 1904959 - 1904927 - T 70 -9.8 -3.10894 | gap 1, opp_overlap 1904927, overlap 1904874 ACGATCACCAGCCAA CCGCGCCAGGGTCTT GCAT ACG-CTCTGGCGCGG TTAAATCCCCAGGCC TERM 2546 1905840 - 1905869 + T 100 -14.3 -3.68359 | overlap 1905844 1905863 CCTGTTTTGTGACTG GCGGTGCGGAAGG CGAA CCTTCCGCATAGC TTATGCTTTTCAGAA TERM 2547 1905844 - 1905865 + T 86 -14.5 -2.65876 | overlap 1905840 1905863 TTTTGTGACTGGCGG TGCGGAAGG CGAA CCTTCCGCA TAGCTTATGCTTTTC pagC 1906436 - 1905879 - | outer membrane invasion protein (PagC) TERM 2548 1906014 - 1906027 + g 73 -5.3 -4.63218 | CCAGGCAAATCCCGT TTTCC TTGA GGAAA TTTTGTTAGAAAAAG TERM 2549 1906130 - 1906120 - G 75 -4 -4.93365 | GCGTATAACGAAAAA TTGT CAG ACAA TCGATAGGCTGGCCC pagD 1907248 - 1907511 + | putative outer membrane virulence protein (PagD) SEN1805 1907643 - 1907855 + | cold shock protein (CspH) envE 1908271 - 1908792 + | putative lipoprotein TERM 2550 1908816 - 1908851 + F 73 -10.5 -2.94329 | opp_overlap 1908814, overlap 1908815 CGCTGTGAAGAGAGT GCCGCTAACCTCTTG ACACGA CAACAGGTTAGCGAC CTTTACTTCCACGTG msgA 1908983 - 1909222 + | putative virulence protein (MsgA) TERM 2551 1909277 - 1909260 - T 95 -12.7 -4.18197 | opp_overlap 1909260 1909262 ATGTCCGATCGAAAA CAGCGCC CTGA GGCGCTG TCTGTGACGATATAA TERM 2552 1909260 - 1909277 + T 79 -12.7 -2.89191 | opp_overlap 1909260, overlap 1909262 ATGTCCGATCGAAAA CAGCGCC CTGA GGCGCTG TCTGTGACGATATAA TERM 2553 1909262 - 1909275 + T 70 -9.5 -2.99649 | opp_overlap 1909260, overlap 1909260 GTCCGATCGAAAACA GCGCC CTGA GGCGC TGTCTGTGACGATAT TERM 2554 1909654 - 1909683 + T 75 -6.5 -4.52589 | opp_overlap 1909658 1909660, overlap 1909656 TATTACTATGTTTCC AAGATAGTCTCGA CCAG TCAAGACTATCTA TTTTATATAAAAAAG TERM 2555 1909656 - 1909681 + T 77 -9.1 -3.87627 | opp_overlap 1909658 1909660, overlap 1909654 TTACTATGTTTCCAA GATAGTCTCGA CCAG TCAAGACTATC TATTTTATATAAAAA TERM 2556 1909736 - 1909722 - T 71 -3.6 -4.75472 | opp_overlap 1909711 TTCACATGAATAAAA TACATG TTA CATATA AAAATCTCTTACTTC SEN1810 1912607 - 1911483 - | putative bacteriophage protein TERM 2557 1913019 - 1913047 + r 82 -11.8 -3.37402 | opp_overlap 1913024, overlap 1913024 TCGAATACTAATAAT AAAAACGGGGAC GTTAA GTCCCCGTTTTA GTTTTTAACAATTAT TERM 2558 1913042 - 1913024 - R 100 -11.7 -5.31855 | opp_overlap 1913024 1913019 TACTAATAATAAAAA CGGGGAC GTTAA GTCCCCG TTTTAGTTTTTAACA TERM 2559 1913024 - 1913042 + r 100 -11.7 -4.77757 | opp_overlap 1913024, overlap 1913019 TACTAATAATAAAAA CGGGGAC GTTAA GTCCCCG TTTTAGTTTTTAACA icdA 1914318 - 1913068 - | isocitrate dehydrogenase TERM 2560 1913504 - 1913515 + g 71 -7.2 -3.965 | ACCACGATCTCTTTA CCCG TGTT CGGG TTCTTAATTTTCAGC TERM 2561 1914542 - 1914530 - g 76 -2.7 -5.11613 | overlap 1914531 ACACCATGCAAAAAA CTTCT TTT AGAAA TCACTACGTTAAGCG TERM 2562 1914784 - 1914759 - g 72 -11.2 -3.14132 | gap 1 TTTGGTGCTGACTAA TGACGGCGCGC TGCAG GCGCGCC-TCA CGCAACCGGGCAAAC ymfC 1914490 - 1915155 + | putative ribosomal large subunit pseudouridine synthase B SEN1813 1915152 - 1915481 + | putative secreted protein TERM 2563 1915709 - 1915735 + G 76 -2.9 -5.12068 | gap 1 ATGCATCAGTGGATT GCGCCGGATAAG ACCC CGT-TCCTGCGC TTTTTATTCGCTATC ymfB 1915493 - 1915954 + | putative mutT family protein trmU 1916008 - 1917114 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2564 1917123 - 1917172 + F 72 -2.8 -4.93877 | opp_overlap 1917123 1917130 GGTCTGATTATTCAA TACACAACACCATTCAAGTCGC CTCAAA GCGGCTTAAAAGATGAAGTGTA TTTTATTTGATACAA ycfC 1917195 - 1917842 + | hypothetical protein TERM 2565 1917903 - 1917921 + G 71 -4.4 -4.58395 | opp_overlap 1917903 1917904 1917907, overlap 1917904 CGCTACGGCGATAAA GTCAGCGC GCT GCGCGGAA TTTTTAGCGAATACG TERM 2566 1918173 - 1918155 - g 81 -3.8 -5.27335 | gap 1, overlap 1918156 1918157 TTTCTGAAAGAAAAA GTCGCCG CGATCC CGGCG-C TACATGACGTTTCCG purB 1917846 - 1919216 + | adenylosuccinate lyase TERM 2567 1919224 - 1919254 + F 76 -9.1 -3.67724 | overlap 1919221 1919225 TTAAATAATGCCTGC CTCACCCTCTTTT CTTCA GAAAGAGGGTGAC TATTTGTCTGGTTTA TERM 2568 1919225 - 1919253 + F 79 -12.6 -2.7955 | overlap 1919224 1919221 TAAATAATGCCTGCC TCACCCTCTTTT CTTCA GAAAGAGGGTGA CTATTTGTCTGGTTT phoP 1919340 - 1920014 + | transcriptional regulatory protein PhoP, regulator of virulence determinants TERM 2569 1921157 - 1921147 - g 74 -6.8 -4.25104 | TGTCGGCGAGCAAAA CGAC TTT GTCG AAGTAATGGGCAACG phoQ 1920014 - 1921477 + | sensor protein PhoQ, regulator of virulence determinants ycfD 1921558 - 1922679 + | hypothetical protein SEN1821 1924053 - 1922719 - | hypothetical protein TERM 2570 1923009 - 1923024 + g 90 -10.4 -4.34263 | opp_overlap 1923003 ACAACACCATGGATA CGTCGG ACTG CCGACG TTTATATTCTTCCAG TERM 2571 1923366 - 1923353 - G 76 -3.1 -5.00616 | gap 1 TTCTGCTGCAAAAAA GAGGCG ACG CGC-TC ACGATTATCCCAGGT TERM 2572 1923709 - 1923682 - G 70 -3.3 -4.79451 | overlap 1923705 ACTGTAAACATAAAA GGCCGCCAGGT GTTCAA ACATATCGGCC CGATCGCCCGGATAA TERM 2573 1924022 - 1923995 - G 100 -9.2 -4.87665 | overlap 1923999 CTCCAGGCAGAAAAA TTGATGGCGGAA AATA TCCCGCCATAAA TAATAAAACGCTTCA pepT 1925286 - 1924057 - | aminotripeptidase TERM 2574 1925099 - 1925121 + g 72 -4.1 -4.76892 | gap 1 CCCTCAACATTGGCC GGGAGCGTCG CCAT CAACG-TCCC TTTTTCACTTAATGT TERM 2575 1925918 - 1925892 - g 90 -5.7 -5.17576 | opp_overlap 1925910, overlap 1925909 TACGAATGCAAAAAA CGCCAGCCGCC GAGAT AGCGCCTCGCG TGACCGATGCGCTGC potA 1925537 - 1926673 + | spermidine/putrescine transport ATP-binding protein PotA (ABC superfamily) TERM 2576 1927472 - 1927484 + G 76 -10.5 -3.67597 | GCTATTGATTTACTG GCGGG CTT CCCGC TTATTGAATAAGAAG potB 1926657 - 1927520 + | spermidine/putrescine transport system permease protein PotB TERM 2577 1928464 - 1928454 - g 70 -3.2 -4.6971 | GAAAGCGCAAGAAAA GGCA ACC TACC TGGCAGCGAAAATTC TERM 2578 1928649 - 1928630 - g 74 -2.2 -5.09895 | overlap 1928632 TACCTATTGAAAAAA TGGTAAAA GAGG TTTTACTA GCGGATAAGACGTTT TERM 2579 1928827 - 1928849 + G 78 -2.1 -5.26316 | gap 1 CACGTTCGCTCAGAA CAACA-AAGC GGCT GTTTATGTTG TTTTTTATAAAATCA sifA 1927849 - 1928859 + | putative virulence determinant TERM 2580 1929418 - 1929441 + G 81 -11.7 -3.53012 | ATTGGCTCGTTAACC GCGGTGGCG CTTTAT CGCTACCGC TTTCGCGGGAAGCCA potC 1929175 - 1929954 + | spermidine/putrescine transport system permease protein PotC TERM 2581 1929959 - 1929945 - f 72 -8.5 -3.75115 | opp_overlap 1929944, overlap 1929941 TCGTGATAAAACCAA GGGCC GATAA GGCCC GTAATTCAGGGGACG potD 1929979 - 1931025 + | spermidine/putrescine-binding periplasmic protein precursor SEN1828 1931928 - 1931107 - | putative regulatory protein TERM 2582 1931980 - 1931969 - R 73 -2.2 -5.1615 | gap 1, overlap 1931972 GTAAGATGTAAAAAA GCAGC ACC GC-GC ATCCCACCTGCATCC ycfX 1932858 - 1931947 - | putative ROK-family protein ycfW 1934131 - 1932887 - | ABC transporter integral membrane subunit ycfV 1934832 - 1934131 - | ABC transporter ATP-binding subunit ycfU 1936024 - 1934825 - | ABC transporter integral membrane subunit TERM 2583 1936388 - 1936374 - g 75 -6.4 -4.58395 | GTTATGCCTGAAAAA CAACGT TAC ACGCTG CCGACAAAAGCGGGC TERM 2584 1936772 - 1936758 - g 90 -5.6 -5.14563 | opp_overlap 1936760, overlap 1936759 1936760 CTGGTGATGAAAAAA GGCCAG CGG CTGTCC CGCGACGCTCTGCGC TERM 2585 1937503 - 1937517 + G 90 -4.2 -5.36441 | overlap 1937477 AGTTCCTCGAATCTT TCAGCG GCC CGGTGA TTTTTTCTGTGGAAA TERM 2586 1938023 - 1937994 - g 82 -11.4 -3.85698 | gap 1, overlap 1937977 1937978 GCGCCGCTGCATAAA CTGGGCG-GCGAC GCCTG GTCGCGCGCCCGG CAGAAAGCGGCGGAA TERM 2587 1938466 - 1938445 - g 70 -6.5 -4.16904 | gap 1, overlap 1938446 AAGAGCAGACACAAA TCCT-GGCGG AAG CCGCCGAGGG TAAGATCGATATTCT TERM 2588 1938846 - 1938834 - g 83 -10.5 -4.01564 | overlap 1938824 GAAAATATTCAGAAA GCCGC AGA GCGGC TGGCGGAACTGGTAC mfd 1936362 - 1939808 + | transcription-repair coupling factor (TrcF) TERM 2589 1939815 - 1939843 + F 72 -10.3 -2.85069 | gap 1, overlap 1939812 1939811 ATTGCATAAGCGTCA GGCCGGGCGTCA TTACTC TG-CGTCCGGCC TAATCTTTACAAATT TERM 2590 1940170 - 1940142 - g 76 -3.2 -5.03314 | gap 1, opp_overlap 1940150, overlap 1940144 GCGATCGCCAAAAAA TATAACGTGGGCT TTTT AGCCCT-GTTACA GGCCAACCCCGGCAT ycfS 1939956 - 1940921 + | hypothetical protein TERM 2591 1940943 - 1940972 + T 100 -15.1 -5.88565 | opp_overlap 1940947, overlap 1940947 ATAGCTGACCGACAA AAAAGCCTCGCGA TGCA TCGCGAGGCTTTC TTTTTTTATTGTGGC TERM 2592 1940968 - 1940947 - T 100 -15.9 -5.28176 | opp_overlap 1940943 1940947 CTGACCGACAAAAAA GCCTCGCGA TGCA TCGCGAGGC TTTCTTTTTTTATTG TERM 2593 1940947 - 1940968 + T 100 -15.9 -5.33131 | opp_overlap 1940947, overlap 1940943 CTGACCGACAAAAAA GCCTCGCGA TGCA TCGCGAGGC TTTCTTTTTTTATTG ycfR 1941275 - 1941018 - | putative secreted protein ycfQ 1941517 - 1942152 + | putative TetR-family regulatory protein TERM 2594 1942203 - 1942177 - T 100 -10.1 -5.60993 | opp_overlap 1942177 CTTCGGATAAAAAAA GCCCCTCAGCC TGAGC GAATGAGGGGC TAACTTGCAGAGTAC ycfJ 1942765 - 1942226 - | putative secreted protein TERM 2595 1942936 - 1942905 - R 90 -13.8 -3.42583 | gap 1 GCAAGAGATGGAGAA GCG-CTCACCGGC GCGAGCA GCCGGTGAGGCGC AGAGAAATTAATGCA ndh 1944248 - 1942944 - | NADH dehydrogenase TERM 2596 1944139 - 1944149 + g 89 -3.2 -5.4505 | TTTCTGTCTACCAGC GTGA TTT TCGC TTTTTTCTTGCGCCC TERM 2597 1944315 - 1944276 - R 77 -10.4 -3.41982 | opp_overlap 1944272, overlap 1944264 AAATTTATTAACCAA TTGTTAATTAAAAGTTAT TAGT ATAGCCTTTAATTAACAA CAAGTTACGTTAATG TERM 2598 1944449 - 1944464 + r 77 -10.4 -3.33492 | opp_overlap 1944449 TTGAGCATAAAAAAA CCAGCC GCAA GGCTGG TTATCCGGTCACTGA TERM 2599 1944464 - 1944449 - R 100 -10.4 -5.67063 | opp_overlap 1944449 TTGAGCATAAAAAAA CCAGCC GCAA GGCTGG TTATCCGGTCACTGA ycfP 1945045 - 1944503 - | hypothetical protein SEN1840 1946095 - 1945070 - | putative glycosyl hydrolase TERM 2600 1945201 - 1945191 - G 70 -6.8 -4.08706 | opp_overlap 1945186 1945191 CCTTTATGATACAAA CGTG TAA CACG TTCTGCTTTGATCGG ycfN 1946930 - 1946106 - | hypothetical protein TERM 2601 1946518 - 1946502 - G 75 -6.5 -4.4078 | CCGCCGCAACCAAAA CGGCG TACGCCT CGCCG GATCGCAACACGACC TERM 2602 1946705 - 1946693 - G 90 -6.2 -5.24129 | CCGGCGTATAAAAAA GCGC TCGCG GCGC AAGACTGGCCGGCAA TERM 2603 1946901 - 1946880 - G 76 -10.9 -3.64984 | gap 1, overlap 1946878 ATACTGGGGAAAATA GCGCGAC-AG GAT CTCGTCGCGC GTTAAGGGATTATTG ycfM 1947549 - 1946911 - | putative lipoprotein ycfL 1947937 - 1947563 - | putative lipoprotein ycfF 1948299 - 1947940 - | putative protein kinase C inhibitor fhuE 1948641 - 1950815 + | outer-membrane receptor for Fe(iii)-coprogen, fe(iii)-ferrioxamine b and fe(iii)-rhodotrulic acid TERM 2604 1950873 - 1950856 - T 100 -12.7 -5.14965 | opp_overlap 1950856, overlap 1950842 AGCGCCATTAAAAAA GGCAGCC GAAT GGCTGCC TTTTTTCTCCCCAAC TERM 2605 1950856 - 1950873 + T 100 -12.7 -5.24129 | opp_overlap 1950842 1950856 AGCGCCATTAAAAAA GGCAGCC GAAT GGCTGCC TTTTTTCTCCCCAAC ptsG 1952333 - 1950900 - | PTS system, glucose-specific IIBC component TERM 2606 1951489 - 1951506 + g 74 -6.9 -4.24002 | opp_overlap 1951489 GCGGAAATCATGATA CCGCCCA CTTT TGCGCGG TTTTCCGGTTTAGCA TERM 2607 1952556 - 1952583 + r 100 -15.6 -3.59627 | opp_overlap 1952553 1952552, overlap 1952575 TGTTTCCACAAGCTC GTTCACCGCCCC TTTT GTGGCGGTGAAC TTTACGCGCTTTGCT ycfH 1953425 - 1952628 - | hypothetical protein TERM 2608 1953104 - 1953093 - G 71 -7.2 -3.98016 | opp_overlap 1953092 1953093 ATGATGAATAAAAGA CGCC TGCT GGCG GATTTTGGTCTCAGG holB 1954440 - 1953436 - | DNA polymerase III, delta' subunit TERM 2609 1954384 - 1954401 + g 76 -5.6 -4.72272 | GTGCCCACGTCCCGC CTGGTA ACTTTC TACCAG TTTTTCATAGGCGGG tmk 1955078 - 1954437 - | thymidylate kinase TERM 2610 1954621 - 1954634 + g 83 -9.5 -4.08692 | opp_overlap 1954615 1954616 CGATCCAAATCGCCG CGCGC TCTG GCGCG TTTTAGCCCGACTTC yceG 1956024 - 1955068 - | putative secreted protein TERM 2611 1955424 - 1955435 + g 75 -3.6 -4.89063 | overlap 1955422 1955421 CCTGATCGCGTTCGC TGGC GACA GCCG TTTCTTTTTCAATAA TERM 2612 1955941 - 1955922 - G 80 -10 -3.96148 | gap 1 TTTTTTCATCATAAA GCTGGTCGC CAA GCG-CCAGC CGCCCCGTTCCCGCC TERM 2613 1955998 - 1956015 + g 77 -11.3 -3.57144 | AATAAGTAACGTGCT GTTCGCC AGAT GGCGAAC TTTCCACATCCCCAC pabC 1956902 - 1956093 - | 4-amino-4-deoxychorismate lyase TERM 2614 1956996 - 1956980 - R 87 -7.2 -5.24531 | opp_overlap 1956974 1956980 ATGCCTGATAAAAAA GGCCCG ACAAG CGGACC TTTTTATTAATGTCT TERM 2615 1956980 - 1956996 + r 81 -5 -5.17744 | opp_overlap 1956980, overlap 1956974 ATGCCTGATAAAAAA GGCCCG ACAAG CGGACC TTTTTATTAATGTCT fabF 1958231 - 1957026 - | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 2616 1957598 - 1957623 + g 85 -12.5 -3.51329 | CATCGCGTTCTTTAT CCCACGGACGG CTCG CCGCCTGTGGG TTATCGTTGCGGGTC TERM 2617 1958317 - 1958345 + r 71 -9.6 -3.15056 | gap 1, opp_overlap 1958318 1958320, overlap 1958315 GGACAAAAAGATAAA ACT-CAGGCGGTC GAAC GACCGCCTGGAGA TGTTCACTTACGCCT TERM 2618 1958344 - 1958318 - R 100 -13.1 -5.02287 | gap 1, opp_overlap 1958317 1958315, overlap 1958320 GACAAAAAGATAAAA CT-CAGGCGGTC GAAC GACCGCCTGGAG ATGTTCACTTACGCC TERM 2619 1958341 - 1958320 - R 90 -15.9 -2.72919 | opp_overlap 1958317 1958315, overlap 1958318 CAAAAAGATAAAACT CAGGCGGTC GAAC GACCGCCTG GAGATGTTCACTTAC acpP 1958589 - 1958353 - | Acyl carrier protein fabG 1959479 - 1958745 - | 3-oxoacyl-[acyl-carrier protein] reductase fabD 1960421 - 1959492 - | malonyl CoA-acyl carrier protein transacylase TERM 2620 1960209 - 1960196 - G 71 -9.5 -3.53012 | opp_overlap 1960185 CCTGCTGCTGCCAAA CGCGC CAAA GCGCG ACGGAAGCGGTTAAT TERM 2621 1960229 - 1960246 + g 70 -3.3 -4.74539 | gap 1, overlap 1960229 AAGCGGTTAATAGCG CC-GGCTG CGT CTGCCAGG TTTTATTCAGTTCTT fabH 1961390 - 1960437 - | 3-oxoacyl-[acyl-carrier-protein] synthase III plsX 1962519 - 1961470 - | fatty acid/phospholipid synthesis protein TERM 2622 1961712 - 1961723 + g 90 -5.8 -5.24129 | TGAGGTGACTGAATC GCCT CGTC AGGC TTTTTTGTAACCAAC rpmF 1962856 - 1962683 - | 50S ribosomal protein L32 yceD 1963429 - 1962908 - | hypothetical protein TERM 2623 1963497 - 1963469 - H 83 -10.3 -3.74077 | opp_overlap 1963475, overlap 1963475 CGTCATATAGTCAAA GAAAAAGGCAGCC TGC GGTTGCCTTTTGC CAATAATTCGCACAC TERM 2624 1963491 - 1963475 - H 95 -7.9 -5.31519 | opp_overlap 1963475, overlap 1963469 ATAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC TERM 2625 1963475 - 1963491 + H 83 -10.1 -4.12902 | opp_overlap 1963469 1963475 ATAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC TERM 2626 1964123 - 1964155 + G 71 -8.3 -3.80018 | TTGAGCGCCTGGAGG GCCGCGATCCGAACA CGC TGATCGGCTTGCCGC TTATTGCTCTGTGCC yceF 1963627 - 1964211 + | hypothetical protein TERM 2627 1964433 - 1964451 + T 72 -5.9 -4.4009 | AAAGCATTGGTATTA CGAACCG ATGTA CGGTGCG TTTTATCCCATAGGG SEN1861 1965452 - 1964709 - | putative inner membrane lipoprotein rluC 1966567 - 1965608 - | ribosomal large subunit pseudouridine synthase C TERM 2628 1968947 - 1968935 - g 76 -3.3 -5.11112 | AAAGCGGAAGAAAAA GCGGA GCG TCAGC AGGATCGTCGCAAGC rne 1967141 - 1970347 + | ribonuclease E TERM 2629 1970366 - 1970383 + T 100 -12.7 -5.25803 | opp_overlap 1970366 AAATGCTGATACAAA GCCGACC GCCA GGTCGGC TTTTTTATGCCCCTT TERM 2630 1970383 - 1970366 - T 95 -12.7 -4.05322 | opp_overlap 1970366 AAATGCTGATACAAA GCCGACC GCCA GGTCGGC TTTTTTATGCCCCTT TERM 2631 1970550 - 1970522 - T 100 -14.6 -5.55664 | TGACGACTAAAAAAA TGCCCGCGCC GGGGTGGAT GGCGCGGGCA GACAAAACATATCCA flgL 1971547 - 1970594 - | flagellar hook-associated protein 3 TERM 2632 1970865 - 1970875 + g 87 -2.4 -5.61881 | TTGGTTTTATCAATG GCGG CAG CGGC TTTTTCTTTTTCCAC flgK 1973223 - 1971562 - | flagellar hook-associated protein 1 flgJ 1974238 - 1973288 - | flagellar protein FlgJ TERM 2633 1973719 - 1973730 + g 74 -7.2 -4.20516 | opp_overlap 1973718 CCAGAATCAGATGAT GCGG CACC CCGC TTTGTTCGCTGGCCA TERM 2634 1973788 - 1973820 + g 100 -21.3 -4.24606 | opp_overlap 1973765 GAAAGTCTTTACTGT CGCCGGAGAGCGGCG CAT CGCTGCTGTCCGGCG TTTTCGGTATGGCTT flgI 1975335 - 1974238 - | flagellar P-ring protein precursor flgH 1976045 - 1975347 - | flagellar L-ring protein precursor TERM 2635 1976020 - 1976036 + g 70 -2.9 -4.75776 | overlap 1976023 1976024 AGGGCCATAACTGGG TAAGCGT GAA GCGCGTA TTTTTGCATTACCTT TERM 2636 1976097 - 1976066 - R 75 -11.4 -3.09004 | overlap 1976063 TCATCTTCAAAATCA GGGAGCCGGTGGCG TATC CCCCACCGGCGGCC CCTTAGAGTTGCGTC flgG 1976882 - 1976100 - | flagellar basal-body rod protein FlgG (distal rod protein) flgF 1977651 - 1976896 - | putative flagellar basal-body rod protein FlgF (proximal rod protein) TERM 2637 1977557 - 1977516 - G 74 -11.5 -3.18507 | gap 1 AAGAGAGGCCATCAA CGGGCAC-CGCGCGTAGC GCGTTAA GCTGCGCGCGAAAGCCCG GCGTTGAGGCATTAG flgE 1978883 - 1977672 - | flagellar hook protein FlgE TERM 2638 1978026 - 1978038 + g 85 -9.1 -4.45544 | overlap 1978016 GCTCACCAGGTCGCC CGGCT TAT AGCCG TTTTGATTGGTGGCG flgD 1979608 - 1978910 - | flagellar hook formation protein FlgD flgC 1980024 - 1979620 - | putative flagellar basal-body rod protein FlgC (proximal rod protein) flgB 1980444 - 1980028 - | putative flagellar basal-body rod protein FlgB (proximal rod protein) TERM 2639 1980527 - 1980517 - H 71 -6.8 -4.1552 | TATCGCCGGAATAAA CGCA AAA TGCG TCGCTATTTATTGCG TERM 2640 1980625 - 1980635 + G 74 -8.2 -3.92324 | overlap 1980623 TTAAAACGAGGATTC GCCG TGG CGGC TTTGCTGTTCAGCCC TERM 2641 1981195 - 1981182 - g 77 -8.1 -4.07568 | overlap 1981164 CGCCGTCGCGCAAAA TGCGC GCGT GCGCA TGACATCGGGTCAAA flgA 1980601 - 1981260 + | flagellar basal body P-ring protein FlgA precursor TERM 2642 1981459 - 1981434 - g 78 -2.5 -5.24129 | gap 1, overlap 1981449 CGCCGGTACAAAAAA CGCGTCAGGA AAAAACG TCC-GCCGCG ACGAGCGCCAGCGTA TERM 2643 1981462 - 1981449 - g 81 -3.8 -5.14563 | overlap 1981434 CGCGTCAGGAAAAAA CGTC CGCCGC GACG AGCGCCAGCGTAACG flgM 1981352 - 1981645 + | negative regulator of flagellin synthesis (anti-sigma factor) TERM 2644 1981915 - 1981903 - g 76 -3.3 -5.1101 | CGATTACCGAAAAAA CGCAG CAT CTTCG CGACCTCAACCAGCA flgN 1981650 - 1982072 + | flagella synthesis protein FlgN TERM 2645 1982121 - 1982148 + T 71 -10.7 -2.64472 | gap 1, opp_overlap 1982133, overlap 1982117 CCTGAATGCCTTGTA G-GCCTGATAGC ACAGC GCTATCAGGCAC TGAATTTACGCCGTC mviN 1983728 - 1982154 - | virulence factor MviN TERM 2646 1983582 - 1983570 - G 90 -6.2 -5.28826 | overlap 1983558 AAACGCCACAAAAAA GGCG TCGGT CGCC ATCCCTGCGCCAAAA mviM 1984916 - 1983993 - | putative virulence factor MviM yceH 1985565 - 1984918 - | hypothetical protein TERM 2647 1985203 - 1985228 + g 81 -11.8 -3.53012 | opp_overlap 1985192 1985218 TTCATGCATCCGCGA CGCCCGGCTA CGCAAC TCGCCGGGCG TTTGCGCGCCGCGCA rimJ 1986185 - 1985601 - | ribosomal-protein-alanine acetyltransferase yceL 1986422 - 1987630 + | putative membrane transporter TERM 2648 1987843 - 1987831 - g 74 -7.7 -4.10161 | GATGATTGGTCAAAA GATGG TGC CCATC CTGCAAAAAGATGAT grxB 1987694 - 1988341 + | glutaredoxin 2 TERM 2649 1988351 - 1988373 + F 100 -10.6 -4.7657 | opp_overlap 1988342 ATCTAACTCCCGCCA GGCGGCAA CCCTTTC TTGCCGCC TTTTTCAGCTTTTTC TERM 2650 1988394 - 1988422 + F 76 -8.2 -4.0492 | gap 1 CAGCTTTTTCTAGTG GCACCATGTCCGC TGGC GCG-ACATGCTGC TTTGTGTCAAGATTA yceB 1988466 - 1989026 + | hypothetical protein TERM 2651 1989035 - 1989048 + F 100 -9.5 -5.81412 | CAATTGATTTCGGAG GGCGC GCTC GCGCC TTTTTTTTACGTGCA TERM 2652 1989586 - 1989596 + G 81 -8.2 -4.37092 | overlap 1989585 GTTGATATCTTCGAT CGCG AAG CGCG TTTTATCGACACCGT pyrC 1989130 - 1990176 + | Dihydroorotase dinI 1990250 - 1990495 + | damage-inducible protein TERM 2653 1990522 - 1990537 + F 100 -11.8 -5.63517 | CAGTGATGTATGTTT GCCGGG TCGC CCCGGC TTTTTTATTTGCGCA yceP 1990782 - 1991039 + | hypothetical protein TERM 2654 1991063 - 1991078 + F 71 -10.4 -2.73799 | overlap 1991060 1991059 GCTCCCCCTCTCTCA GGCACC GTAA GGTGCC TCACTTATTTCTGGC TERM 2655 1991541 - 1991560 + G 80 -12.2 -3.36694 | overlap 1991538 GCCGGAAATTCGCGT GCCCGATA ATTA TATCGGGC TGTTTGAAGCTGACT TERM 2656 1992034 - 1992050 + G 71 -7.9 -3.96216 | opp_overlap 1992034 TTCCTGCGTAACGTA CTGCCGG GTA TCGGCGG TTGTTTACATGGGGC solA 1991152 - 1992270 + | N-methyl-L-tryptophan oxidase TERM 2657 1992276 - 1992294 + F 83 -9.5 -4.1822 | TAGCCAATAATTTGT CGGCCCC GTAAA GGGGCTG TTTATTAAGGTAACC yceO 1992311 - 1992424 + | hypothetical protein SEN1890 1992687 - 1993259 + | cytochrome b561 homolog 2 TERM 2658 1993461 - 1993450 - g 85 -2.2 -5.52384 | overlap 1993452 TTTTGACGAAAAAAA TCCG TCGG CAGA CAAAGTGAACGTGAC yceI 1993256 - 1993831 + | hypothetical protein TERM 2659 1993877 - 1993844 - T 100 -16.8 -3.53761 | opp_overlap 1993838 1993841 1993839 1993844 TAACGCCTGGCGAAA TGCCGGATAGCGGC CTTTAC GCTGCTATCCGGCA AAATATTACTCAGCC yceA 1994935 - 1993883 - | hypothetical protein htrB 1995155 - 1996075 + | lipid A biosynthesis lauroyl acyltransferase (heat shock protein) TERM 2660 1996100 - 1996081 - f 78 -12.2 -2.64616 | opp_overlap 1996081 GCGCTATTGACAGGA TTGCAGCC GTCA GGCTGCAA TTTTTCCCCTCTTTT TERM 2661 1996081 - 1996100 + F 100 -12.2 -4.69464 | opp_overlap 1996081 GCGCTATTGACAGGA TTGCAGCC GTCA GGCTGCAA TTTTTCCCCTCTTTT yceE 1996230 - 1997444 + | putative membrane transport protein msyB 1997526 - 1997900 + | acidic protein MsyB; multicopy suppressor of SecY yceK 1998128 - 1997901 - | putative lipoprotein TERM 2662 1998154 - 1998172 + r 93 -10.3 -4.62783 | opp_overlap 1998154 ATTTCACTATAAAAA TACCGGC ATCAC GCCGGTA TTTTTCACCTCACTC TERM 2663 1998172 - 1998154 - R 100 -11 -4.91511 | opp_overlap 1998154 ATTTCACTATAAAAA TACCGGCA TCA CGCCGGTA TTTTTCACCTCACTC mdoH 2000745 - 1998202 - | Glucans biosynthesis glucosyltransferase H TERM 2664 1999747 - 1999772 + g 73 -6.1 -4.37711 | opp_overlap 1999758 CTGATTGCCCCAGCG GCGGCAAAAAT CGTC AATATTGCCGC TTTTGCGTTTCATAC TERM 2665 2000333 - 2000358 + g 72 -3.9 -4.7497 | opp_overlap 2000333, overlap 2000334 ATTAACAAAATATAG CGGCGTATAGT GCCG ACGGTACGCCA TTTTTGCTCGCTCGC TERM 2666 2000638 - 2000675 + g 77 -8.6 -4.09685 | gap 3, opp_overlap 2000630, overlap 2000643 CGAGTAAGTCCGATG CTCGGCATCCAGCGCC-TG ATG CACGGCGC-GGATGTC-AG TTTTCGGCAATGCCG mdoG 2002273 - 2000738 - | periplasmic glucans biosynthesis protein MdoG precursor mdoC 2002545 - 2003699 + | Glucans biosynthesis protein C ymdC 2005203 - 2003716 - | hypothetical protein TERM 2667 2003760 - 2003790 + gT 83 -8.2 -4.42464 | opp_overlap 2003777 CCGCCAACCGTACCA GAACTCGCTGCCAG AAA CGCGTAGCGGGTTC TTTCTTTAACACCTT TERM 2668 2003912 - 2003897 - GT 74 -7.6 -4.07568 | opp_overlap 2003889 TGGCTCTGCGTAAAA CGCTTA TGAA TAAGCG TCGCCAGCGTTTCAC TERM 2669 2004451 - 2004463 + gT 70 -9.1 -3.31144 | opp_overlap 2004448 2004449, overlap 2004440 2004438 ATCCGCCATAAACTG GCTGG TTT CCAGC TTATGCAGATAACGG TERM 2670 2005119 - 2005133 + gT 77 -7.8 -4.36914 | ATAGCGGTTCAACGG CACGCT CCA GGCGTG TTTTATCAGGCAGGG SEN1901 2005678 - 2005139 - | hypothetical protein ymdA 2006085 - 2005765 - | hypothetical protein csgC 2006542 - 2006216 - | curli prooduction protein TERM 2671 2006578 - 2006563 - R 100 -10.4 -5.75342 | opp_overlap 2006563 CCTCCCGAAAAAAAA CAGGGC TTAT GCCCTG TTTTTTTATTAGCGC TERM 2672 2006563 - 2006578 + r 100 -10.4 -5.7946 | opp_overlap 2006563 CCTCCCGAAAAAAAA CAGGGC TTAT GCCCTG TTTTTTTATTAGCGC csgA 2007059 - 2006604 - | major curlin subunit precursor csgB 2007556 - 2007101 - | nucleation component of curlin monomers TERM 2673 2007986 - 2007974 - H 72 -4.9 -4.60317 | ACACAATAATTAAAA TGATT AAA AATCA ATGAATTATTATAAT TERM 2674 2008172 - 2008185 + H 73 -2.5 -5.24799 | opp_overlap 2008172 GAAAACAGTTAAAAG TATTT TCGT AAATA TTTTTCTCTTTCTGG TERM 2675 2008568 - 2008547 - g 73 -5.3 -4.62471 | opp_overlap 2008547 TTTAAGCCGCAAAAA CAATAATAT AAAA ACATTATTG TTAAATACCCCTGAC csgD 2008311 - 2008961 + | csg operon transcriptional regulator protein csgE 2008966 - 2009361 + | assembly/transport component in curli production csgF 2009388 - 2009804 + | assembly/transport component in curli production csgG 2009918 - 2010664 + | assembly/transport component in curli production TERM 2676 2010678 - 2010698 + T 100 -14 -5.86976 | opp_overlap 2010678 GATGAATACGACAAA GCGTGGGG AAGAA CCCCACGC TTTTTTATTTTGTGA TERM 2677 2010698 - 2010678 - T 100 -14 -4.07455 | opp_overlap 2010678 GATGAATACGACAAA GCGTGGGG AAGAA CCCCACGC TTTTTTATTTTGTGA ycdZ 2011233 - 2010703 - | hypothetical protein TERM 2678 2010895 - 2010885 - G 74 -3.2 -4.87892 | CCGGAACAAAAGAAA GCAA TAG CTGC TTTGCCTGGATACAC ycdY 2011840 - 2011286 - | hypothetical protein ycdX 2012601 - 2011864 - | putative hydrolase TERM 2679 2011998 - 2011964 - G 80 -8.7 -4.08216 | gap 1, opp_overlap 2011954 CGATCTTCCGGAAAA TTCACCGCAT-CCAGA ATTT TCCGGCATTCGGTGAA ATCGCCAAGCGTAAA TERM 2680 2012679 - 2012664 - R 86 -11.8 -3.64703 | opp_overlap 2012664, overlap 2012638 CGTTTTTTAGCGAAA CCCGGC CCGC GCCGGG TTGATGTCAATATCC TERM 2681 2012664 - 2012679 + r 79 -11.8 -3.28912 | opp_overlap 2012638 2012664 CGTTTTTTAGCGAAA CCCGGC CCGC GCCGGG TTGATGTCAATATCC ycdW 2013624 - 2012686 - | putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region TERM 2682 2013962 - 2013981 + r 100 -10 -4.9755 | ATATCTAAGTTGAGA GCCTGTAC AGAA GTACGGGC TTTTTGCTTATATGT TERM 2683 2014146 - 2014165 + r 100 -10 -5.01845 | ATATTTAAGTTGAGA GCCTGTAC AGAA GTACGGGC TTTTTGCTTATTATG SEN1914 2014715 - 2014413 - | hypothetical protein TERM 2684 2015082 - 2015072 - R 72 -3.2 -4.91511 | AGGCCAGTATAAAAA TCAG GTT CCGA TTGTGCAGGTGCAAC SEN1915 2016224 - 2015142 - | hypothetical protein TERM 2685 2015213 - 2015227 + g 95 -11.4 -4.67982 | TCGCGTTTTTGTTAG CGACCG CCA CGGTCG TTTTATTAAATCCGC TERM 2686 2015483 - 2015494 + g 74 -7.2 -4.08216 | opp_overlap 2015483 2015484 CAATAGCAGCAACAA CGGC CGTG GCCG TTTTAGGACCAATGC SEN1916 2017474 - 2016626 - | hypothetical protein TERM 2687 2017136 - 2017110 - G 91 -11.6 -4.25283 | overlap 2017111 AGTTCTGTATCAAAA CCATCACTTCCC ATT GGGTAGTGATGA AACACATACTGCGTA TERM 2688 2017135 - 2017111 - G 81 -12.9 -3.14848 | overlap 2017110 GTTCTGTATCAAAAC CATCACTTCCC ATT GGGTAGTGATG AAACACATACTGCGT SEN1917 2017848 - 2017471 - | hypothetical protein SEN1918 2018048 - 2017923 - | hypothetical protein SEN1919 2018423 - 2018241 - | hypothetical protein SEN1919A 2019008 - 2018787 - | phage encoded DNA-binding protein TERM 2689 2019091 - 2019076 - H 74 -3.3 -4.93547 | CTAACCAAGTAAAAA CTATC GTTTCA GATAG CTATGGCACGAAAAT TERM 2690 2019791 - 2019806 + G 91 -2.6 -5.7946 | GGACATGTACGGTTT GATTTT TACA GAAATC TTTTTTTATTAAAAG SEN1920 2019221 - 2020228 + | phage protein TERM 2691 2020505 - 2020487 - T 100 -11.7 -5.32396 | opp_overlap 2020484 2020483 ACAGGAAAAAGAAAA GGCGGGT AATAA ACCCGCC TGAATATTTAGCGTG SEN1921 2021082 - 2020513 - | putative phage tail protein SEN1922 2022644 - 2021082 - | putative phage tail fibre protein TERM 2692 2021355 - 2021393 + g 71 -12.4 -2.53263 | opp_overlap 2021357 2021359, overlap 2021359 2021362 2021363 GCCGTTATTCTGATA GATAGCCCCGCTTGCACG AAG CGTGTTAGCGGTGATATC TCCATTGACCGTAAA TERM 2693 2021362 - 2021386 + g 72 -12.1 -2.71322 | opp_overlap 2021359 2021357, overlap 2021359 2021355 2021363 TTCTGATAGATAGCC CCGCTTGCACG AAG CGTGTTAGCGG TGATATCTCCATTGA TERM 2694 2021516 - 2021552 + g 100 -5.1 -5.53288 | ATAAATTAAACGTGG CTGTCATTGTCGAATTA TTA TTGCTCGTCAGTGACAG TTTTTTTGCGTTGCC TERM 2695 2022368 - 2022390 + g 90 -4.8 -5.40072 | GAAACAGCGGCTTAT TCGGGATGTC CGC GCCATTCTGA TTTTTTTCAAGACGG SEN1923 2023218 - 2022631 - | putative phage tail protein SEN1924 2024300 - 2023221 - | phage protein TERM 2696 2023545 - 2023509 - G 72 -3.6 -4.68908 | overlap 2023511 2023512 GGCAGCGAAAACAAA GAGTCCGCCGCCAGCA ACAGG TGCCAGCGGCAAAATA TGGTCACGTACAGCC SEN1925 2024706 - 2024293 - | phage protein TERM 2697 2024567 - 2024591 + g 72 -12.2 -2.66435 | gap 1, opp_overlap 2024555 GCAGGCCAGGTGTCC CCCCACCAGCC GTAT GGCTG-TGGGG TCCTGTCATCCCGCT SEN1926 2025244 - 2024711 - | putative phage baseplate protein SEN1927 2026302 - 2025244 - | phage tail protein SEN1928 2027639 - 2026299 - | hypothetical protein TERM 2698 2026943 - 2026964 + g 75 -5.7 -4.63184 | ATGTACTGCCTCTGA GCCTGTCAC CTGA GCGCCAGGC TTTTTGCAGTGCGTT TERM 2699 2027658 - 2027671 + r 74 -8.1 -4.00782 | opp_overlap 2027658 TACCCCATAAGAAAA CCTGC CGGA GCAGG TTTATCGTGATGTAC TERM 2700 2027671 - 2027658 - R 88 -8.1 -4.78237 | opp_overlap 2027658 TACCCCATAAGAAAA CCTGC CGGA GCAGG TTTATCGTGATGTAC SEN1929 2029601 - 2027673 - | phage tape-measure protein TERM 2701 2028138 - 2028113 - G 76 -10.3 -3.64599 | overlap 2028106 CCAGCAGACCGGAAA GCCGTCCGGCC AGCA GGACGGACTGC TGCAGGGCACCAATG TERM 2702 2028575 - 2028591 + g 74 -4.3 -4.73682 | overlap 2028567 2028576 CATTGACGCTGTTTT TCAGCAG AAC CAGCTGG TTTTCTGTTGTGGAC SEN1930 2030012 - 2029686 - | phage protein TERM 2703 2029769 - 2029759 - G 86 -4 -5.41143 | GACCGGGTAAAAAAA TTGA GGA TCAA CATACAGGCTTTGAA SEN1931 2030365 - 2030009 - | phage tail tube protein SEN1932 2031861 - 2030365 - | phage tail sheath protein TERM 2704 2030944 - 2030934 - G 77 -4.6 -4.87665 | overlap 2030936 CGTTACGGATAAAAA CCGC AGC ACGG GCAGTACGGCTTGCA TERM 2705 2031528 - 2031560 + g 76 -11.9 -3.14344 | opp_overlap 2031554 TCACCGTTCCGGTTT CCGTCGCTTCGCCAG TTA CCGTCAAAGCGACGG TTGCTGCCGCGCCTG TERM 2706 2031826 - 2031816 - G 71 -8.2 -3.79419 | opp_overlap 2031815, overlap 2031814 TCTCGGCATAAAACA GCGG AAC CCGC GTATCTGACGGGATG SEN1932A 2032015 - 2031851 - | hypothetical protein TERM 2707 2031971 - 2031994 + g 74 -7.4 -4.17089 | gap 1 TAAAAGGTCGCCACG GGCCGGATCGG GAA CCGAT-CGCCC TTTTGCGGGTTTCAC SEN1933 2032579 - 2032019 - | phage protein SEN1934 2033088 - 2032576 - | phage protein SEN1935 2033464 - 2033060 - | phage protein TERM 2708 2033292 - 2033305 + gr 82 -5.2 -5.00616 | opp_overlap 2033287 CCCTGATAAGCTGCC GCGC CGGGTT GCGC TTTTTTGGCCCACGC SEN1935A 2033784 - 2033461 - | phage protein TERM 2709 2033826 - 2033786 - R 77 -11.2 -3.25317 | gap 1, overlap 2033784 2033782 2033778 2033787 2033789 2033825 GGAGAAAGCAACATA GGATCCTCCTGCGCCCGCC GGGT GGCGGGCACAAAAAAA-CC GCTTAACGCGGCATG TERM 2710 2033826 - 2033787 - R 83 -13.6 -2.54467 | overlap 2033786 2033784 2033782 2033778 2033789 2033825 GAGAAAGCAACATAG GATCCTCCTGCGCCCGCC GGGT GGCGGGCACAAAAAAACC GCTTAACGCGGCATG TERM 2711 2033824 - 2033789 - R 79 -12.6 -2.79677 | overlap 2033786 2033787 2033784 2033782 2033778 GAAAGCAACATAGGA TCCTCCTGCGCCCGCC GGGT GGCGGGCACAAAAAAA CCGCTTAACGCGGCA TERM 2712 2033837 - 2033825 - R 91 -6.2 -5.60993 | overlap 2033786 2033787 2033784 2033782 2033778 GCGGGCACAAAAAAA CCGC TTAAC GCGG CATGGTTTGTTCAGA SEN1936 2035093 - 2033864 - | phage major capsid protein SEN1937 2035705 - 2035103 - | phage pro-head protease SEN1938 2036948 - 2035698 - | phage portal protein SEN1939 2038794 - 2037064 - | phage terminase (large subunit) TERM 2713 2038557 - 2038598 + g 91 -11 -4.36914 | gap 2, overlap 2038557 2038558 AGGGTTCAAATTCTA T-CCGCA-ACTTCCGGCGAG CCCA CTCTCCGGAGGTGTGCGGCA TTTTCTGGGAAAAGC TERM 2714 2038557 - 2038597 + g 83 -12.6 -3.21934 | gap 1, overlap 2038557 2038558 AGGGTTCAAATTCTA TCCGCA-ACTTCCGGCGAG CCCA CTCTCCGGAGGTGTGCGGC ATTTTCTGGGAAAAG TERM 2715 2038558 - 2038596 + g 85 -16.1 -2.52946 | gap 1, overlap 2038557 2038557 GGGTTCAAATTCTAT CCGCA-ACTTCCGGCGAG CCCA CTCTCCGGAGGTGTGCGG CATTTTCTGGGAAAA SEN1940 2039234 - 2038794 - | putative phage terminase (small subunit) SEN1941 2039728 - 2039378 - | phage protein TERM 2716 2039763 - 2039746 - R 84 -8.3 -4.58685 | AAACTCCGGTAAAAA GCACCGC TAGT GCGGGGC TATGGGATTGTTGGT SEN1942 2040291 - 2039752 - | putative exported phage protein SEN1943 2040905 - 2040288 - | putative phage encoded lysozyme TERM 2717 2040447 - 2040423 - G 75 -5.7 -4.67234 | opp_overlap 2040423 2040424 2040426, overlap 2040424 ACGTAATGTGAAAAA CCATGCAGC AGAACGG GCTGCATGC TTCTCCTGTGCCAGC TERM 2718 2040683 - 2040699 + g 83 -7.3 -4.57569 | ACTGATACGGCGTCA GGCGTTT ACC AAACGTC TTTTTCAGCGCCTCC SEN1944 2041562 - 2041173 - | putative prophage membrane protein TERM 2719 2041235 - 2041219 - G 70 -9.5 -3.39058 | overlap 2041217 ATACGAGAGAGAATA CTGAACA GGG TGTTCAG ATCCTGACTGTTGAG TERM 2720 2041632 - 2041615 - R 100 -10.5 -5.64421 | AGGGGAAATAAAAAA GGCCGCC CGAA GGCAGCC TAAAAGTATTTAGAT SEN1945 2042223 - 2041651 - | phage membrane protein TERM 2721 2041869 - 2041858 - G 73 -5.8 -4.45253 | GCAAAATAACATAAA GCTC ACAA GAGC TAGATAACCAAAAAG TERM 2722 2042024 - 2042007 - G 84 -9.1 -4.2928 | overlap 2042008 TAGAAAAAGTAGAAA CCGCAGC CAGT GCTGCGA TATAAAAACCAATCA TERM 2723 2042230 - 2042217 - G 82 -5.3 -5.02074 | TCAGCGGTGAAAAAA GTTTC ATAT GAAAC TCCCGTTAGAGCAAC SEN1946 2043327 - 2042236 - | exported phage protein TERM 2724 2043250 - 2043235 - G 91 -3.9 -5.73978 | opp_overlap 2043239 ATCACAAATAAAAAA CCCAC TCGGAG GCGGG TTCTTGAGACTTATC SEN1947 2044111 - 2043359 - | putative prophage antitermination protein SEN1948 2045114 - 2044125 - | phage protein TERM 2725 2045041 - 2045020 - G 70 -10.1 -3.32946 | opp_overlap 2045020, overlap 2045018 2045021 GGTTCAAGCAGAACA CGCCCCTGC ATAA ACAGGGGCA TCAGTTCCGATCCCG SEN1949 2045982 - 2045122 - | phage protein SEN1949A 2046388 - 2045999 - | crossover junction endodeoxyribonuclease rusa (ec 3.1.22.-) (holliday junction nuclease rusa) (holliday juction resolvase) SEN1950 2047278 - 2046397 - | putative DNA methylase TERM 2726 2046895 - 2046876 - G 79 -7.8 -4.46615 | GACGATTAAGGAAAA GGAAAGCG GCGG CGCGTTCC GGAGCGTCCATCACC SEN1951 2047748 - 2047275 - | phage protein SEN1952 2048719 - 2047745 - | phage protein TERM 2727 2048284 - 2048328 + g 83 -12.2 -3.62591 | gap 1, opp_overlap 2048315, overlap 2048275 2048270 2048316 TCTTGTTTGCGGCAT CACCGCAATCTGGTTTGCGGG GTTG CAC-CAATCCAGATTGCGGGG TTTCCACATTCTGGA TERM 2728 2048359 - 2048315 - G 93 -15.8 -3.14132 | opp_overlap 2048284 2048316 GCGGGGTTGCACCAA TCCAGATTGCGGGGTTTCCA CATTC TGGAAGTCCCGCAATCTGGT TTTCTCCTGAGCGCC TERM 2729 2048316 - 2048358 + g 100 -23.7 -4.46212 | opp_overlap 2048315, overlap 2048284 CGGGGTTGCACCAAT CCAGATTGCGGGGTTTCCA CATTC TGGAAGTCCCGCAATCTGG TTTTCTCCTGAGCGC TERM 2730 2048717 - 2048743 + g 87 -8 -4.56597 | opp_overlap 2048715 2048719 TTGAATAAGGGAACT CATGCAGCACCT CCG AGATGCTTCATG TTTTTGCCGGAACGA SEN1953 2050094 - 2048937 - | phage immunity protein TERM 2731 2049035 - 2049047 + g 89 -9.1 -4.58395 | overlap 2049046 GCAGGCTTACAGCCA GCGGA GAT TCCGC TTTTTCCAGCATGGG TERM 2732 2049684 - 2049671 - G 100 -5.9 -5.58179 | opp_overlap 2049671 2049677 CATGACAAGAAAAAA CCGCA TGAG CGCGG TTGTGCTCTATATTG SEN1954 2050645 - 2050091 - | putative phage-encoded DNA-binding protein TERM 2733 2050590 - 2050613 + g 71 -6 -4.24404 | gap 1, overlap 2050598 ATCGTCTTTTTAATC GCAGCCACC AGCCAGC GG-GGCTGC TTTTCAACTTTCCAT TERM 2734 2051037 - 2051023 - g 71 -10 -3.48772 | AACCGTGTCAGACAA CTTCGC CGC GCGAAG AACATGAAAATTGCT SEN1955 2050996 - 2051691 + | phage encoded transcriptional regulator TERM 2735 2051709 - 2051725 + T 100 -6.5 -6.11644 | opp_overlap 2051709 2051708 GAAAGCGTCGACAAG GCCACCA TTA TAGTGGC TTTTTTTTTGACTCA TERM 2736 2052123 - 2052104 - T 88 -7.8 -4.94058 | opp_overlap 2052104 TTAATGCAAAGAAAA GCGCCATC ACCC AACGGCGC TTTAAGGGAAATGAA SEN1957 2052409 - 2052158 - | phage protein SEN1957A 2052880 - 2052419 - | phage protein TERM 2737 2053632 - 2053617 - g 75 -6.1 -4.56775 | AGGCCGGTTTAAAAA GCAGG ATCTTG CCTGC GATGAAATTCTTACC SEN1959 2052979 - 2053896 + | phage encoded recombination associated protein SEN1960 2053991 - 2054530 + | phage protein TERM 2738 2055127 - 2055113 - g 82 -5 -5.06103 | ACAACCCTGAAAAAA CTCATC ACC AATGAG ATTCCAATCATCTTG SEN1961 2054828 - 2055343 + | phage protein SEN1962 2055340 - 2055699 + | phage protein SEN1963 2055971 - 2056264 + | phage protein SEN1964 2056261 - 2057124 + | phage protein SEN1965 2057121 - 2057690 + | phage protein SEN1965A 2057715 - 2057957 + | phage protein TERM 2739 2058289 - 2058273 - g 73 -5.8 -4.40298 | opp_overlap 2058273 AGCTAAAGCAATAAA GCCAGA ACATA TCCGGC GTTATATGGATGCCC TERM 2740 2058345 - 2058317 - g 91 -7.4 -5.00616 | opp_overlap 2058317 CCCGTGGGCAAAAAA GCCGTGTCCAGG CGAAT CATGAACACAGC TCTATGTCGCGCGTA SEN1966 2057959 - 2058948 + | phage integrase TERM 2741 2058962 - 2058981 + F 91 -6.4 -5.60993 | GAGCTTTTCGATGTG CGCCAG TTAAAATT CTGGCG TTTTTTTCTCACCGA yeeI 2059240 - 2060037 + | hypothetical protein TERM 2742 2060221 - 2060250 + F 83 -13.7 -2.73529 | opp_overlap 2060225, overlap 2060217 2060225 AGGAGCCAAATTTAG GGAAGCAGACGTT CAGT GACGTCTGCTTTC TGCATTTATATCAAC TERM 2743 2060246 - 2060225 - f 73 -10.2 -3.11732 | opp_overlap 2060221 2060217 2060225 GCCAAATTTAGGGAA GCAGACGT TCAGTG ACGTCTGC TTTCTGCATTTATAT TERM 2744 2060225 - 2060246 + F 89 -10.9 -4.04922 | opp_overlap 2060225, overlap 2060221 2060217 GCCAAATTTAGGGAA GCAGACGTT CAGT GACGTCTGC TTTCTGCATTTATAT TERM 2745 2061009 - 2061021 + F 73 -4.1 -4.82901 | ATTAGATCAAAACTT CAACG CTT TGTTG TTTTTGTCAGCAAAC TERM 2746 2061187 - 2061224 + F 76 -8.5 -4.053 | opp_overlap 2061190 2061191 2061195, overlap 2061191 2061195 TCAGAGGAGCCAAAT TAAGGAAAGCAGACGTT CACT GACGTCTGCTTTCTGCA TTTATATCAACTGGT TERM 2747 2061221 - 2061190 - f 86 -11.7 -3.55122 | opp_overlap 2061187 2061191 2061195, overlap 2061191 2061195 GAGGAGCCAAATTAA GGAAAGCAGACGT TCACTG ACGTCTGCTTTCT GCATTTATATCAACT TERM 2748 2061191 - 2061220 + F 90 -15.9 -2.73529 | opp_overlap 2061190 2061191 2061195, overlap 2061187 2061195 AGGAGCCAAATTAAG GAAAGCAGACGTT CACT GACGTCTGCTTTC TGCATTTATATCAAC TERM 2749 2061220 - 2061191 - f 90 -15.2 -2.72591 | opp_overlap 2061191 2061187 2061195, overlap 2061190 2061195 AGGAGCCAAATTAAG GAAAGCAGACGT TCACTG ACGTCTGCTTTC TGCATTTATATCAAC TERM 2750 2061195 - 2061216 + F 89 -10.9 -4.04922 | opp_overlap 2061191 2061190 2061195, overlap 2061191 2061187 GCCAAATTAAGGAAA GCAGACGTT CACT GACGTCTGC TTTCTGCATTTATAT TERM 2751 2061216 - 2061195 - f 87 -10.2 -4.04394 | opp_overlap 2061195 2061191 2061187, overlap 2061191 2061190 GCCAAATTAAGGAAA GCAGACGT TCACTG ACGTCTGC TTTCTGCATTTATAT SEN1970 2061363 - 2062637 + | phage integrase TERM 2752 2062703 - 2062678 - T 90 -6.9 -5.40004 | gap 1, opp_overlap 2062680, overlap 2062680 CATTAAATCAAAAAA TACAGGGAG-GT TTT ACTCTCCCTGTT ACTTATCACTTACGC TERM 2753 2062680 - 2062701 + T 73 -9.5 -3.47403 | gap 1, opp_overlap 2062678 2062680 TTAAATCAAAAAATA CAGGGAG-GT TTT ACTCTCCCTG TTACTTATCACTTAC TERM 2754 2062701 - 2062680 - T 87 -9.5 -4.31698 | gap 1, opp_overlap 2062680, overlap 2062678 TTAAATCAAAAAATA CAGGGAG-GT TTT ACTCTCCCTG TTACTTATCACTTAC SEN1971 2062960 - 2062709 - | hypothetical protein TERM 2755 2062742 - 2062761 + g 80 -12.2 -3.37344 | opp_overlap 2062741 2062746, overlap 2062746 TGATTGTGCCAATAC CGAAGCAG CAAG CTGCTTCG TTAATTCGCTAGAGC TERM 2756 2063484 - 2063494 + r 83 -4 -5.27938 | overlap 2063488 ATTTTCCAGTTCATC CATT GAA AATG TTTTTCTTTCGGAGT SEN1974 2064906 - 2064298 - | hypothetical protein TERM 2757 2065530 - 2065519 - g 72 -2.2 -4.96435 | TTAATAAAAAAATAA CAGC AAAA ACTG GAGACTTACACCGTT SEN1975 2065272 - 2066153 + | hypothetical protein TERM 2758 2066192 - 2066178 - T 73 -10 -3.30781 | TTAAGCGAAAGGGAA CTCTCC ATT GGAGAG AATACATATCACTTG TERM 2759 2068575 - 2068559 - T 89 -9.4 -4.70266 | opp_overlap 2068559 AATATGATCCAAAAA GGGGCA TAAAG TGCCCC TTTAATTAAATAGAC TERM 2760 2068559 - 2068575 + T 80 -10.1 -3.93288 | opp_overlap 2068559 AATATGATCCAAAAA GGGGCAT AAA GTGCCCC TTTAATTAAATAGAC SEN1978 2069138 - 2068581 - | putative type IV pilin TERM 2761 2069060 - 2069041 - G 80 -5 -4.87592 | gap 1 GGATACACAATAAAA GCCGCTACT ACT AAT-GCGGC AATAATCCCCAGAAC TERM 2762 2069255 - 2069274 + r 87 -10.8 -4.12942 | opp_overlap 2069255 GGATGAATTGAAAAA GGCAAAGA TCGC TCTTTGCC TTTTGGGAGATTTAA TERM 2763 2069274 - 2069255 - R 100 -10.8 -4.7629 | opp_overlap 2069255 GGATGAATTGAAAAA GGCAAAGA TCGC TCTTTGCC TTTTGGGAGATTTAA SEN1979 2069851 - 2069546 - | hypothetical protein TERM 2764 2071579 - 2071552 - g 70 -7 -4.19817 | CCCATCTATTCAAAA CACCAGAGCG AAGAACCG CGCTCCGATG AGGAGTAGGAAACAG SEN1980 2070488 - 2072008 + | possible Conjugal transfer protein SEN1981 2072946 - 2072032 - | hypothetical protein SEN1981A 2073371 - 2073108 - | membrane protein SEN1982 2073924 - 2073382 - | lipoprotein TERM 2765 2074127 - 2074073 - H 71 -6.9 -4.10657 | opp_overlap 2074065 2074082, overlap 2074083 2074086 2074087 2074088 2074116 2074121 TCATATCGTTTAAAA CGATCAAA-AACAATCTTATGATAGTT TTT AACTATCATAA-ATAGATATTCGATCG ATAATAACAATTAAT TERM 2766 2074116 - 2074083 - H 80 -6.3 -4.86773 | gap 1, opp_overlap 2074065 2074082, overlap 2074073 2074086 2074087 2074088 TAAAACGATCAAAAA CAATCTTATGATAGTT TTT AACTATCATAA-ATAG ATATTCGATCGATAA TERM 2767 2074114 - 2074086 - H 77 -6.9 -4.50218 | opp_overlap 2074065 2074082, overlap 2074083 2074073 2074087 2074088 AACGATCAAAAACAA TCTTATGATAGTT TTT AACTATCATAAAT AGATATTCGATCGAT TERM 2768 2074113 - 2074087 - H 74 -10.4 -3.28504 | opp_overlap 2074065 2074082, overlap 2074086 2074083 2074073 2074088 ACGATCAAAAACAAT CTTATGATAGTT TTT AACTATCATAAA TAGATATTCGATCGA TERM 2769 2074112 - 2074088 - H 76 -11.7 -2.56018 | opp_overlap 2074065 2074082, overlap 2074087 2074086 2074083 2074073 CGATCAAAAACAATC TTATGATAGTT TTT AACTATCATAA ATAGATATTCGATCG TERM 2770 2074305 - 2074295 - H 71 -6.8 -4.08579 | ATAAAACGAAGCAAA GCTC TGT GAGC GGGTTCAGTCTCTTT SEN1984 2074852 - 2075229 + | exported protein TERM 2771 2075310 - 2075255 - T 79 -8.6 -4.26076 | gap 1, opp_overlap 2075254 2075265 2075267 2075271 2075302, overlap 2075271 TTATTTTTATGAAAA CTAACTTCAT-GAGTAAGATCATTTCC CAA GGAAGTGATCTTACTCTATATGATTAG ATTATATTCTTTCTA TERM 2772 2075265 - 2075299 + T 100 -19.6 -3.01984 | opp_overlap 2075255 2075271, overlap 2075254 2075267 2075271 GAAAACTAACTTCAT GAGTAAGATCATTTCC CAA GGAAGTGATCTTACTC TATATGATTAGATTA TERM 2773 2075267 - 2075297 + T 100 -16.4 -3.05914 | opp_overlap 2075255 2075271, overlap 2075265 2075254 2075271 AAACTAACTTCATGA GTAAGATCATTTCC CAA GGAAGTGATCTTAC TCTATATGATTAGAT TERM 2774 2075271 - 2075293 + T 79 -11.4 -3.36313 | opp_overlap 2075271 2075255, overlap 2075267 2075265 2075254 TAACTTCATGAGTAA GATCATTTCC CAA GGAAGTGATC TTACTCTATATGATT SEN1985 2076917 - 2075307 - | hypothetical protein SEN1986 2077931 - 2076969 - | hypothetical protein SEN1987 2078409 - 2077987 - | hypothetical protein SEN1988 2078727 - 2078458 - | hypothetical protein TERM 2775 2079063 - 2079083 + G 79 -11.3 -3.72576 | TAGTAGCAGCACTTC GTGATTGTT GCC AACAATCAC TTTGCTGGACAGGGC SEN1989 2079026 - 2079325 + | hypothetical protein TERM 2776 2079565 - 2079585 + F 86 -11.3 -3.72576 | TGGTAGCAGCACTTC GTGATTGTT GGC AACAATCAC TTTGCTGGACAGGGC TERM 2777 2079704 - 2079724 + F 75 -11.3 -3.09635 | opp_overlap 2079695 TAAAAGCAGCGGTTC GTGATTGTT CGA AACAATCAC TTCGCTGATAGCAGT TERM 2778 2079943 - 2079899 - f 87 -11 -3.93262 | opp_overlap 2079898 2079915 2079925, overlap 2079900 2079913 TTCGAACATAGCAAA CTCCTATGTTCAAACATAGA TCCGT CCTATGTTCGAACATAGCAA GATCTATGTTCGAAC TERM 2779 2079942 - 2079900 - f 80 -12.3 -2.95475 | opp_overlap 2079898 2079915 2079925, overlap 2079899 2079913 TCGAACATAGCAAAC TCCTATGTTCAAACATAGA TCCGT CCTATGTTCGAACATAGCA AGATCTATGTTCGAA TERM 2780 2079925 - 2079962 + F 100 -18.8 -5.45726 | opp_overlap 2079900 2079899 2079913 2079946 2079947, overlap 2079898 2079915 AAACATAGATCCGTC CTATGTTCGAACATAG CAAGAT CTATGTTCGAACATAG TTTTTTTAACATATA SEN1990 2080087 - 2080821 + | putative DNA-binding protein TERM 2781 2081207 - 2081193 - g 72 -3.6 -4.74013 | CCGAAACATACAAAA CAATAA TCC TTATCG TGGGTGGTCTGAAGG SEN1991 2080852 - 2081643 + | hypothetical protein SEN1992 2081729 - 2082208 + | hypothetical protein SEN1993 2082369 - 2082773 + | putative DNA-binding protein (histone-like protein hlp-II) TERM 2782 2082780 - 2082809 + T 73 -10.2 -2.96366 | opp_overlap 2082780 2082785, overlap 2082779 2082785 GCACTCTGATCACAA TAAAACCGTCAA TCTAAT TTGGCGGTTTTA CTTTCGTTCGCTGTA TERM 2783 2082804 - 2082785 - T 71 -3.5 -4.81212 | opp_overlap 2082785 2082780 2082779, overlap 2082780 CTGATCACAATAAAA CCGTCAA TCTAAT TTGGCGG TTTTACTTTCGTTCG TERM 2784 2082785 - 2082804 + T 74 -5.7 -4.62054 | opp_overlap 2082780 2082785, overlap 2082780 2082779 CTGATCACAATAAAA CCGTCAA TCTAAT TTGGCGG TTTTACTTTCGTTCG TERM 2785 2083142 - 2083104 - T 77 -9 -3.86372 | opp_overlap 2083099 2083104, overlap 2083128 TTAAGCTAAATAGAA TCTGACAGATATCTGT ATAAATA ACTGATAACTGTCAGA TCTGATTTGAGCCAA SEN1994 2083755 - 2083189 - | hypothetical protein TERM 2786 2083791 - 2083757 - R 100 -16.8 -2.83715 | CTCACCATTATCATA TGTTAGGTTAATGTTA GTT TAACACTAACCTAACA TAAAGTGGGACTAAT SEN1995 2085073 - 2083802 - | hypothetical protein TERM 2787 2085171 - 2085160 - R 75 -3 -5.14563 | TTTTCTATTAAAAAA TGAT CTCA ATCA AATTTATAGTTATAA SEN1996 2085615 - 2085319 - | hypothetical protein SEN1997 2085962 - 2085660 - | hypothetical protein SEN1998 2086250 - 2086032 - | putative phage regulatory protein TERM 2788 2086380 - 2086422 + r 89 -4.2 -5.73978 | ATGTTTATATAATAT GAATACAGGGGAAGTTCA GGGTTAG TGGATGTCCCTTGTTTTC TTTTTTGTTTCTGGT SEN1999 2087276 - 2086401 - | hypothetical protein TERM 2789 2087565 - 2087549 - H 70 -9.5 -3.06162 | overlap 2087551 GACTTTATGGTAATA CAGCATT AAA AATGCTG GTAAATATGATGGTA TERM 2790 2087719 - 2087746 + H 83 -6.2 -5.05782 | AAGAAATTATCTTTA CCCGGTTGATCT GATA AGGTTTGCCGGG TTTTTTGACATCCAT TERM 2791 2087990 - 2087979 - g 83 -7.2 -4.58585 | overlap 2087980 CACCGAAAGAAGAAA CGCC GCCC GGCG CGCCGGAGAAATACG SEN2001 2087819 - 2088343 + | hypothetical protein TERM 2792 2088530 - 2088485 - f 78 -12 -3.05384 | gap 1, opp_overlap 2088471, overlap 2088511 GCGCCCGGCACTCAA CCGGTGCGTCACTTTCGTCGC GCAAA GCGAC-AAAGTGACGCACAAC CACTACACCGCGCCA SEN2003 2088818 - 2089516 + | Putative DNA-binding protein TERM 2793 2090611 - 2090598 - g 74 -2.3 -5.00027 | ATGAAAAAGACAAAA TAGCG GAAA CGCTG ACGTTTAAAGATGGT TERM 2794 2091304 - 2091286 - g 74 -2.3 -5.00846 | TAAAGACGATAAAAA GCAGGGA GCCGA TCGCCGC TGGAGCGAACGTACC SEN2004 2089859 - 2092027 + | hypothetical protein SEN2005 2092084 - 2093814 + | hypothetical protein TERM 2795 2093870 - 2093819 - T 80 -13.1 -2.52896 | gap 2 CCACGCCTTAATCGA TTTACCCGCCCGGCCACCTTTCTCA CATG CGGG-AAGGCGGC-GGGCGGGAAAA ATCAATCGCGGAAGT TERM 2796 2094646 - 2094603 - T 100 -16.8 -3.29043 | opp_overlap 2094597 2094607, overlap 2094606 2094607 AAGCTCGCGGCACAA TAAGGCCTTAGCGGGATGCA GAAT CGCCTCCCGCTAAGGCTTCA TTCAGCCGCTTTCCA TERM 2797 2094643 - 2094606 - T 100 -16.3 -3.78934 | opp_overlap 2094597 2094607, overlap 2094603 2094607 CTCGCGGCACAATAA GGCCTTAGCGGGATGCA GAAT CGCCTCCCGCTAAGGCT TCATTCAGCCGCTTT TERM 2798 2094642 - 2094607 - T 100 -19.8 -2.87146 | opp_overlap 2094597 2094607, overlap 2094606 2094603 TCGCGGCACAATAAG GCCTTAGCGGGATGCA GAAT CGCCTCCCGCTAAGGC TTCATTCAGCCGCTT TERM 2799 2094607 - 2094642 + T 100 -19.1 -3.34192 | opp_overlap 2094607 2094606 2094603, overlap 2094597 TCGCGGCACAATAAG GCCTTAGCGGGATGC AGAATC GCCTCCCGCTAAGGC TTCATTCAGCCGCTT amn 2096173 - 2094719 - | AMP nucleosidase TERM 2800 2094927 - 2094904 - G 83 -8 -4.40003 | overlap 2094905 2094907 TGTCAGAAACACAAA GCAGCGTGCC GTAA GGCACGCGGA AGCGATAGCCCTGGG TERM 2801 2094926 - 2094905 - G 74 -11.5 -3.23279 | overlap 2094904 2094907 GTCAGAAACACAAAG CAGCGTGCC GTAA GGCACGCGG AAGCGATAGCCCTGG TERM 2802 2094924 - 2094907 - G 83 -12.7 -3.16835 | overlap 2094905 2094904 CAGAAACACAAAGCA GCGTGCC GTAA GGCACGC GGAAGCGATAGCCCT SEN2008 2096695 - 2096369 - | hypothetical protein SEN2008A 2097075 - 2096689 - | hypothetical protein TERM 2803 2097508 - 2097481 - R 100 -9.8 -5.05782 | ATGGATGTCAAAAAA CCCGGCAAACCT TCTC AGGTCAACCGGG TAAAGATAATTTATT yeeO 2099245 - 2097788 - | putative membrane transport protein TERM 2804 2097867 - 2097851 - G 71 -5.7 -4.27617 | overlap 2097853 2097854 CAGACGCCAGTAAAA CAGCGCG CCG CGCACGG CCCAGTCAAGAAACA TERM 2805 2099544 - 2099571 + r 100 -9.8 -5.00884 | AAGAACTTATCTTTA CCCGGTTGACCT GATA AGGTTTGCCGGG TTTTTTGACGCCCAT erfK 2100635 - 2099706 - | hypothetical protein cobT 2101783 - 2100713 - | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2102553 - 2101810 - | cobalamin (5'-phosphate) synthase TERM 2806 2102135 - 2102094 - G 100 -10.7 -4.75472 | gap 1 GGTACATCAATAAAA CGGCGCTG-CCGCGTCCGGC CGC ACAGGCCGCCGCCAACGCCG CCAACATTGGCGTTC TERM 2807 2102296 - 2102283 - G 74 -2.4 -5.00616 | GGCGCGCGGAAAAAA TACC ATCGCA GGTA TCGGCCAACCCATCC cobU 2103095 - 2102550 - | cobinamide kinase and guanylyltransferase cbiP 2104612 - 2103092 - | putative cobyric acid synthase TERM 2808 2104128 - 2104090 - G 76 -9.7 -3.86346 | gap 2, overlap 2104092 CCAGCGTGCCATAAA TAGCGGCGAATA-CG-CCG CCT CGGTCGATATCCGCCACCA GAATAACCGGACACT TERM 2809 2104107 - 2104092 - G 81 -11.8 -3.52113 | overlap 2104090 AGCGTGCCATAAATA GCGGCG AATA CGCCGC CTCGGTCGATATCCG TERM 2810 2104556 - 2104537 - G 79 -2.7 -5.252 | overlap 2104538 2104548 2104549 CATCCTGATAAAAAA TGCGGCA TAAACC CGCCGCC AGCACACTTTTGCCG cbiO 2105424 - 2104609 - | putative cobalt transport ATP-binding protein cboQ 2106110 - 2105433 - | putative cobalt transport protein TERM 2811 2105587 - 2105575 - G 71 -4.8 -4.56133 | overlap 2105570 CTGCAATAACCAAAA CGCA GCGTT TGCG AGCGACGAATTGCCG TERM 2812 2106065 - 2106048 - G 76 -5.5 -4.81551 | opp_overlap 2106051 2106051, overlap 2106049 CAGCCACAGCAAAAA CTTGCGC TGCG GCGCAAC GTGTGCCCAGCGGCT cbiN 2106378 - 2106097 - | putative cobalt transport protein CbiN cbiM 2107117 - 2106380 - | cobalamin biosynthesis protein TERM 2813 2106620 - 2106607 - G 75 -3.7 -4.96848 | overlap 2106609 TCGCGCACAGAAAAA CGGCG ACAT CGCGG CGCAGTCCGGCACGG TERM 2814 2106893 - 2106878 - G 74 -2.4 -4.98911 | overlap 2106879 CAGGACAAAAATAAA CGCGCC GCAC AGCGCC AGCAGTACCTTCTGA cbiL 2107827 - 2107114 - | precorrin-2 C20-methyltransferase TERM 2815 2107391 - 2107412 + g 77 -8 -4.07568 | opp_overlap 2107380 ATAACCGCCAGCGAT TGCCGTTC TATGGC GAGCGGCA TTTTCGCGCGGGCGG TERM 2816 2107515 - 2107503 - G 91 -4.1 -5.52384 | TCTGGAGTAAAAAAA TCCAG GTA CTGAA TAGCATCGCATCGCC TERM 2817 2107769 - 2107755 - G 79 -11.4 -3.68569 | opp_overlap 2107753 CCAGCGAGCCAAGAA TCCGCG CTG CGCGGA CGGTTATCAGGTCGG cbiK 2108618 - 2107824 - | sirohydrochlorin cobaltochelatase (ec 4.99.1.3) TERM 2818 2107883 - 2107896 + g 86 -9.5 -4.36914 | opp_overlap 2107868 2107881 GCGCGACAAACATCG CCCGG ATAG CCGGG TTTTCTCCCAGCCCG cbiJ 2109412 - 2108621 - | cobalt-precorrin-6a reductase (ec 1.3.1.-) cbiH 2110134 - 2109409 - | precorrin-3 C17-methyltransferase TERM 2819 2109640 - 2109655 + g 78 -11.8 -3.28924 | opp_overlap 2109616 CAGATGCCCTTCGCG CCCGCG GCTG CGCGGG TTGTAAAAACAGATA cbiG 2111189 - 2110134 - | cobalamin biosynthesis protein TERM 2820 2110341 - 2110367 + g 76 -2.9 -5.03314 | CACGCGGCAGCAGGA GGCGAGCTG AATAAGCCC CGGCTCCCC TTTTTTGAGCGTGAC cbiF 2111943 - 2111170 - | precorrin-4 C11-methyltransferase cbiT 2112505 - 2111927 - | precorrin-8W decarboxylase cbiE 2113100 - 2112495 - | decarboxylating precorrin-6Y C5,15-methyltransferase TERM 2821 2112882 - 2112870 - G 75 -6.9 -4.40358 | ACCGATGCCATAAAA CAGCG GAT CGCCG GAGGCCAGCACCACG cbiD 2114233 - 2113094 - | deacetylating cobalt-precorrin-6A synthase TERM 2822 2113174 - 2113191 + g 71 -6.2 -4.25104 | opp_overlap 2113185 AAGAAAACAGGATGG CGTCGC AGACAG GCGGCG TTTTGGTAAAACGCA cbiC 2114865 - 2114233 - | precorrin-8X methylmutase cibB 2115835 - 2114876 - | Cobalamin biosynthesis protein cbiA 2117211 - 2115832 - | cobyrinic acid A,C-diamide synthase TERM 2823 2116103 - 2116121 + g 77 -7.4 -4.34402 | opp_overlap 2116103 2116102, overlap 2116104 TCACAGTAGCCAAAG CGGGTAAG TCG CTTACCCA TTTTGCTGTGACCGG TERM 2824 2116104 - 2116120 + g 71 -10.9 -3.2032 | opp_overlap 2116103 2116102, overlap 2116103 CACAGTAGCCAAAGC GGGTAAG TCG CTTACCC ATTTTGCTGTGACCG TERM 2825 2117103 - 2117115 + g 95 -10.5 -4.56775 | opp_overlap 2117095 CTTTAAACGGCTGTA CGCGC AGC GCGCG TTTTTGCAGCAGCCT pocR 2118720 - 2117809 - | pdu/cob regulatory protein PocR TERM 2826 2118111 - 2118132 + g 89 -2.9 -5.48054 | opp_overlap 2118111 2118122 GATCGTCGGACAAAT GCGCATC AATATAGC GAAGCGC TTTTTTCATTTTACT TERM 2827 2118857 - 2118822 - R 100 -16.4 -3.59456 | opp_overlap 2118824 2118830, overlap 2118824 2118830 AAAGTACAATGACAA TATCAAAAGTCTCCCA TTGC TGGGAGACTTTTGATC AGTTCGTGAAAGCAG TERM 2828 2118824 - 2118855 + r 100 -19 -2.56596 | opp_overlap 2118824 2118822 2118830, overlap 2118830 AGTACAATGACAATA TCAAAAGTCTCCCA TTGC TGGGAGACTTTTGA TCAGTTCGTGAAAGC TERM 2829 2118855 - 2118824 - R 100 -19 -3.36046 | opp_overlap 2118824 2118830, overlap 2118822 2118830 AGTACAATGACAATA TCAAAAGTCTCCCA TTGC TGGGAGACTTTTGA TCAGTTCGTGAAAGC TERM 2830 2118830 - 2118849 + r 95 -12.2 -4.31379 | opp_overlap 2118830 2118824 2118822, overlap 2118824 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC TTTTGATCAGTTCGT TERM 2831 2118849 - 2118830 - R 100 -12.2 -4.47259 | opp_overlap 2118824 2118830, overlap 2118824 2118822 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC TTTTGATCAGTTCGT pduF 2119730 - 2118936 - | propanediol diffusion facilitator pduA 2120255 - 2120539 + | putative propanediol utilization protein pudB 2120647 - 2121348 + | putative propanediol utilization protein PduB TERM 2832 2121515 - 2121494 - g 72 -2.3 -4.84017 | gap 1, overlap 2121496 AACCGTCGATAAAAA TCG-TTAACG GCG CGGTAACCGA GCTGGACGGAAAACC pduC 2121367 - 2123031 + | glycerol dehydratase large subunit TERM 2833 2123705 - 2123689 - g 83 -7.9 -4.59773 | opp_overlap 2123701, overlap 2123691 2123700 CGTGACGGGCAAAAA CCCGCAG GAA CTGCGCG TGGCGCTTTGATAAA pduD 2123042 - 2123716 + | diol dehydratase medium subunit TERM 2834 2123701 - 2123711 + F 72 -8.2 -3.73224 | opp_overlap 2123691 2123689 2123700 AAACCCGCAGGAACT GCGC GTG GCGC TTTGATAAAGGATAA TERM 2835 2123843 - 2123786 - g 72 -11.2 -3.14051 | gap 3, overlap 2123784 TGAGCCGCATGAACA GC-CTGCAGGGCGATGC-GCCAGCAGCGG CTC CTGCGGCAGGCGGCA-CGTCCCGCAGCGC AAAGGTCAGCGACTA TERM 2836 2123889 - 2123875 - g 70 -7.1 -4.15044 | CCGCTGGCGAACAAA CACCC GGAAT GGGTG AAAACCGCCACCAAT pduE 2123731 - 2124252 + | diol dehydratase small subunit TERM 2837 2124963 - 2124951 - g 86 -7.7 -4.82667 | CGATGAGACGAAAAA CATCG TCC CGATG GCGCGCGCGCTGATT TERM 2838 2125018 - 2125007 - g 74 -7.2 -4.07568 | CCGTGGTGGTTAAAA CGCC ATCC GGCG ACGTCAAAGCGCGCG TERM 2839 2125594 - 2125550 - g 83 -12.3 -3.71917 | gap 1, opp_overlap 2125550, overlap 2125543 ACCCTAAAGGCGAAA TCATCGCCACTCACCTCGCC GGTGCA GGCGACATG-GTGACGATGA TTATTGCCCGCGAGC pduG 2124262 - 2126094 + | propanediol utilization protein pduH 2126084 - 2126434 + | Propanediol utilization protein pduJ 2126453 - 2126728 + | propanediol utilization protein TERM 2840 2126937 - 2126892 - g 90 -10.4 -4.26076 | gap 1, overlap 2126893 2126895 GGATGGTGATTAAAA TTACCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGGTGC GCAATTTGCCGAACA TERM 2841 2126936 - 2126893 - g 84 -13.9 -3.15324 | gap 1, overlap 2126892 2126895 GATGGTGATTAAAAT TACCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGGTG CGCAATTTGCCGAAC TERM 2842 2126934 - 2126895 - g 100 -16.5 -3.13504 | gap 1, overlap 2126893 2126892 TGGTGATTAAAATTA CCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGG TGCGCAATTTGCCGA pduK 2126732 - 2127214 + | propanediol utilization protein pduL 2127214 - 2127846 + | propanediol utilization protein pduM 2127843 - 2128334 + | propanediol utilization protein pduN 2128338 - 2128613 + | propanediol utilization protein pduO 2128623 - 2129633 + | propanediol utilization protein pduP 2129630 - 2131024 + | putative CoA-dependent proprionaldehyde dehydrogenase TERM 2843 2131888 - 2131907 + G 71 -4.8 -4.56597 | overlap 2131886 2131890 GCCAAACGCTACGCG CGGCTGGC CAAA GCCTGCGG TTTTTGCCCGGCAGA pduQ 2131036 - 2132148 + | putative propanol dehydrogenase TERM 2844 2132204 - 2132220 + G 74 -11.5 -3.28712 | overlap 2132207 2132207 TGAAATTCGTGAGCG CGTCCGC GCA GCGGGCG TTGTCGGCGCAGGCG pduS 2132145 - 2133500 + | propanediol utilization ferredoxin TERM 2845 2133613 - 2133625 + G 70 -3.3 -4.78107 | GGTCAGCAAGACCAT CTGCC CGG GGAAG TTTTTACTGATGCTG pduT 2133503 - 2134057 + | putative propanediol utilization protein pduU 2134057 - 2134407 + | putative propanediol utilization protein PduU TERM 2846 2134479 - 2134455 - g 73 -5.5 -4.58395 | opp_overlap 2134474 2134476 GCCAGTGCGGAAAAA CCTCGCTGACC CAA AGCCTGCGCGG CGAAGCGCTCCATTA pduV 2134412 - 2134864 + | putative propanediol utilization protein PduV TERM 2847 2135123 - 2135136 + G 74 -2.3 -5.02074 | overlap 2135112 2135113 TGGGCCATCGTGTGG CGCAC GGCG GTGAG TTTTTTAAAGACTCG TERM 2848 2135445 - 2135427 - g 70 -6.6 -4.07568 | CGTTCTGGCGGAAAA GCTGGGCG TAC CACTCAGC GCATTACGGGTGATT pduW 2134849 - 2136063 + | acetokinase pduX 2136121 - 2137023 + | putative propanediol utilization protein TERM 2849 2137049 - 2137015 - T 79 -10.7 -3.53563 | ACAGGCGGGGTCAAA CTGCAGTGAGAGCCT GATAT ACGCTCCCACTGCCG TAGCGCATTATTCGG yeeX 2137392 - 2137057 - | hypothetical protein yeeA 2138695 - 2137637 - | hypothetical protein TERM 2850 2138325 - 2138347 + g 76 -2.8 -5.08824 | gap 1, opp_overlap 2138312, overlap 2138325 ACGGCAAGCGTTATG CC-TATCAG TAGCGC CTGATACGG TTTTTTCCCTAAGGC TERM 2851 2138762 - 2138790 + r 76 -8.2 -4.07568 | gap 1, overlap 2138763 CAAAAATAGCGCACT G-GCGGACGGA ACACATTA TCCGTCCGCTC TTTTCAGCCAGGAAA TERM 2852 2138763 - 2138788 + r 86 -11.9 -3.63744 | overlap 2138762 AAAAATAGCGCACTG GCGGACGGA ACACATTA TCCGTCCGC TCTTTTCAGCCAGGA sbmC 2139281 - 2138814 - | putative DNA gyrase inhibitory protein TERM 2853 2138957 - 2138946 - G 90 -5.8 -5.23316 | CAGGACATCAAAAAA CCGT TCCC ACGG CTTCGCAAAGTCACG dacD 2140604 - 2139432 - | penicillin-binding protein TERM 2854 2140541 - 2140522 - G 86 -10 -4.25104 | GGTTGGGGAGCAAAA CTTACGGC ATCG GCCGCAAG CGCAGGAGAAAGGTG TERM 2855 2140707 - 2140670 - R 74 -8.5 -4.0056 | opp_overlap 2140676 2140681, overlap 2140671 2140681 ACAAACATGGATAAA TTGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCTG ACATTATTTTATGGA TERM 2856 2140706 - 2140671 - R 78 -12 -2.99251 | opp_overlap 2140676 2140681, overlap 2140670 2140681 CAAACATGGATAAAT TGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCT GACATTATTTTATGG phsC 2141492 - 2140728 - | thiosulfate reductase cytochrome b subunit phsB 2142067 - 2141489 - | thiosulfate reductase electron transport protein PhsB phsA 2144358 - 2142082 - | thiosulfate reductase precursor TERM 2857 2144301 - 2144291 - G 77 -8.2 -4.07568 | GCCCCGGGCGGAAAA GCGC CCA GCGC GCAGGCAGAGCAGCC TERM 2858 2145189 - 2145174 - g 81 -2.6 -5.31275 | overlap 2145182 CGTTACCACAAAAAA TAAAAG ACTT CTTTCA GCCGAAAGATAAAAA TERM 2859 2145311 - 2145297 - g 83 -7.2 -4.59511 | AAGATGTCTCAAAAA TGAATG CAG CATTCA TGCGTAAGCATATTG sopA 2144978 - 2147326 + | secreted protein SopA TERM 2860 2147372 - 2147353 - f 88 -12.2 -3.56704 | opp_overlap 2147353, overlap 2147349 CCCGCATGAAATTAA GGGACACA GCGT TGTGTCCC TCTGTACATAGACCC TERM 2861 2147353 - 2147372 + F 79 -12.2 -2.91264 | opp_overlap 2147349 2147353 CCCGCATGAAATTAA GGGACACA GCGT TGTGTCCC TCTGTACATAGACCC TERM 2862 2148983 - 2149009 + G 87 -8.6 -4.57837 | opp_overlap 2148985, overlap 2148985 CAGCGCTGGCTAGAG CATCGCCGTCAG GTG CTGACGCCGGAG TTTTTACAACAATAT sbcB 2147693 - 2149123 + | exodeoxyribonuclease I TERM 2863 2149231 - 2149213 - T 100 -16 -5.73978 | opp_overlap 2149213 ATGACAAACAAAAAA CCGGAGGC ACT GCCTCCGG TTTTACTATTGCCGA TERM 2864 2149213 - 2149231 + T 100 -16 -4.4261 | opp_overlap 2149213 ATGACAAACAAAAAA CCGGAGGC ACT GCCTCCGG TTTTACTATTGCCGA yeeF 2150623 - 2149259 - | putative amino acid transporter protein TERM 2865 2150801 - 2150774 - R 100 -9.2 -5.63103 | opp_overlap 2150777 TTTGAAGCAAAAAAA TAACCGACGCGT ATTA AAACGTCGGTTA GTGTCATTTTTTGCA yeeY 2151817 - 2150903 - | putative transcriptional regulator TERM 2866 2151758 - 2151769 + g 77 -4.4 -4.83615 | overlap 2151753 TGCCGACGCCGCCGC GAAG CTGC CTTC TTTTTCTAACGCATC yeeZ 2152687 - 2151863 - | hypothetical protein TERM 2867 2152576 - 2152593 + g 81 -8.4 -4.26076 | TCATACGGGCCGCTT CCACCC CGTCAA GGGTGG TTTTGCTGCCGGTAA TERM 2868 2152991 - 2152965 - H 100 -22.4 -3.99405 | opp_overlap 2152965 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTGGCGCGC TERM 2869 2152965 - 2152991 + H 100 -22.4 -5.75342 | opp_overlap 2152965 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTGGCGCGC TERM 2870 2153902 - 2153892 - g 71 -8.2 -3.89617 | opp_overlap 2153894 ATGGAGAAACTGAAA GCGC TTG GCGC CAGCTCGATTCTGGT hisG 2153046 - 2153945 + | ATP phosphoribosyltransferase TERM 2871 2154258 - 2154229 - g 93 -11.5 -4.44974 | gap 1 CTAAATTTGATAAAA CAGAAGTGACAGCG CTA CGC-GTCACCCCTG AAGAGATCGCCGCCG hisD 2154048 - 2155352 + | histidinol dehydrogenase hisC 2155349 - 2156428 + | histidinol-phosphate aminotransferase (imidazole) TERM 2872 2157217 - 2157241 + G 76 -10.7 -3.62096 | opp_overlap 2157217, overlap 2157219 CTACCGATGGATGAA TGTCTGGCGCG CTG CGCGCTGGATA TTTCCGGTCGTCCGC TERM 2873 2157219 - 2157239 + G 75 -11.1 -3.39018 | opp_overlap 2157217, overlap 2157217 ACCGATGGATGAATG TCTGGCGCG CTG CGCGCTGGA TATTTCCGGTCGTCC TERM 2874 2157403 - 2157387 - g 70 -3 -4.82855 | gap 1 GACTAAAGGTAAAAA CGATCAC CACC GTG-TCG AAAGTTTGTTTAAAG hisB 2156425 - 2157492 + | bifunctional histidine biosynthesis protein (imidazoleglycerol-phosphate dehydratase; histidinol phosphatase) hisH 2157489 - 2158082 + | Imidazole glycerol phosphate synthase subunit hisH TERM 2875 2158543 - 2158525 - g 84 -8.8 -4.25104 | CGGCTGGCAGGAAAA TTCCGGCG TCT CGCTGGAA CAACTGGTGGAGACC hisA 2158082 - 2158819 + | 5-phosphoribosyl-5-[5-phosphoribosylaminomethyl ideneamino] imidazole-4-carboxamide isomerase hisF 2158801 - 2159577 + | Imidazole glycerol phosphate synthase subunit hisF TERM 2876 2159638 - 2159614 - g 84 -6.3 -5.03314 | overlap 2159615 TGGACTGGGAAAAAA CCGATGGCCTG ATG CCAGCCATCGT GCAACATGCGGTATC TERM 2877 2159637 - 2159615 - g 71 -9.8 -3.61506 | overlap 2159614 GGACTGGGAAAAAAC CGATGGCCTG ATG CCAGCCATCG TGCAACATGCGGTAT hisI 2159571 - 2160182 + | bifunctional histidine biosynthesis bifunctional protein (phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase) TERM 2878 2160217 - 2160183 - T 100 -18.8 -3.72592 | opp_overlap 2160193, overlap 2160184 2160186 2160193 AAGCGTCATCAATAA GCATAAAAAACCGGGC AAC GCCCGGTTTTTTATGA GAAATTTTACCTTTC TERM 2879 2160216 - 2160184 - T 100 -22.3 -2.83073 | opp_overlap 2160193, overlap 2160183 2160186 2160193 AGCGTCATCAATAAG CATAAAAAACCGGGC AAC GCCCGGTTTTTTATG AGAAATTTTACCTTT TERM 2880 2160214 - 2160186 - T 100 -19.1 -2.96249 | opp_overlap 2160193, overlap 2160184 2160183 2160193 CGTCATCAATAAGCA TAAAAAACCGGGC AAC GCCCGGTTTTTTA TGAGAAATTTTACCT TERM 2881 2160207 - 2160193 - T 100 -12.8 -5.4111 | opp_overlap 2160193, overlap 2160186 2160184 2160183 AATAAGCATAAAAAA CCGGGC AAC GCCCGG TTTTTTATGAGAAAT TERM 2882 2160193 - 2160207 + T 100 -12.8 -5.24531 | opp_overlap 2160186 2160184 2160183 2160193 AATAAGCATAAAAAA CCGGGC AAC GCCCGG TTTTTTATGAGAAAT wzzB 2161244 - 2160261 - | polysaccharide chain length regulator TERM 2883 2160645 - 2160665 + g 74 -4.7 -4.77036 | GCGCAACGCTTCTTC GATTTGCTT AAT ACGCAGATC TTTTTGCTCCTGCGC TERM 2884 2161378 - 2161359 - R 70 -10 -3.10244 | opp_overlap 2161359, overlap 2161356 TTGGTCAATAAATCA TCGGGACT CATC AGCCCCGA TTGCCTTATTAATCA udg 2162553 - 2161387 - | UDP-glucose 6-dehydrogenase TERM 2885 2162770 - 2162752 - R 100 -11.7 -6.06529 | opp_overlap 2162747 TAGAGATAAAAAAAA GCCCGGT ATTAA ACCGGGC TTAAACATTTTTGCA gnd 2164196 - 2162790 - | 6-phosphogluconate dehydrogenase, decarboxylating rfbP 2165790 - 2164360 - | undecaprenyl-phosphate galactosephosphotransferase TERM 2886 2164642 - 2164632 - G 76 -5.4 -4.82667 | TTAGTACATTAAAAA GTTG TGG CAAC TCATCAAGGCTAGTT rfbK 2167294 - 2165861 - | phosphomannomutase rfbM 2168720 - 2167281 - | mannose-1-phosphate guanylyltransferase rfbN 2169665 - 2168721 - | putative rhamnosyltransferase rfbU 2170727 - 2169666 - | putative glycosyltransferase TERM 2887 2170431 - 2170451 + g 85 -2.5 -5.4505 | overlap 2170432 CAGTAAGGGGATAGT GTGATGTGT AGT ACACACCAA TTTTTTATTACCAAA TERM 2888 2170970 - 2170959 - R 76 -2.2 -5.28826 | AAATGCCACAAAAAA TAGC ATCT GCCA TAATATACTCACTCT TERM 2889 2171045 - 2171030 - R 73 -4 -4.78981 | AGTAAGCAAAAGAAA GAAAAC TAGG GTTTCC GACAATCTCTAATTG rfbV 2172303 - 2171302 - | O-chain glycosyltransferase rfbX 2173603 - 2172305 - | O-antigen transporter TERM 2890 2172907 - 2172895 - G 81 -4.1 -5.22794 | ATAAGGACGAAAAAA TCAGA AAC CCTGA TGAACGTGATAGTAA TERM 2891 2173667 - 2173650 - R 78 -12.7 -2.71731 | opp_overlap 2173644 TTCATTCTTTAATTA TGCCCGC TTTC GCGGGCA GAAACATCATATAGA rfbE 2174690 - 2173674 - | CDP-tyvelose-2-epimerase rfbS 2175526 - 2174687 - | paratose synthase rfbH 2176874 - 2175561 - | putative dehydratase RfbH TERM 2892 2176381 - 2176394 + g 78 -6.7 -4.62475 | TTACCGAGTGTATGA GCGAT CATT ATCGC TTTTGATTTCTCAGT rfbG 2177980 - 2176901 - | CDP-glucose 4,6-dehydratase rfbF 2178758 - 2177985 - | glucose-1-phosphate cytidylyltransferase rfbI 2179748 - 2178774 - | putative reductase RfbI TERM 2893 2178934 - 2178910 - G 78 -6.5 -4.53034 | overlap 2178913 TCTAGAGAATCAAAA TCATCCATCAC AGC ATGATGGACAA ATCCCTTTCTTCCCC TERM 2894 2179252 - 2179241 - G 71 -4.4 -4.59853 | GTAACTCCCCAAAAA TGAG AGAG CTCA TCTGACCATTGGGAA rfbC 2180305 - 2179754 - | dTDP-4-dehydrorhamnose 3,5-epimerase rfbA 2181184 - 2180306 - | TDP-glucose pyrophosphorylase TERM 2895 2181208 - 2181221 + r 74 -8.1 -3.89215 | opp_overlap 2181208 CTCATTCATAGAAAA TGCCC TGAT GGGCA TTTAAATTTATCAGA TERM 2896 2181221 - 2181208 - R 81 -8.1 -4.55287 | opp_overlap 2181208 CTCATTCATAGAAAA TGCCC TGAT GGGCA TTTAAATTTATCAGA rfbD 2182131 - 2181232 - | dTDP-4-dehydrorhamnose reductase rfbB 2183216 - 2182131 - | dTDP-glucose 4,6-dehydratase TERM 2897 2182536 - 2182560 + g 71 -8.6 -3.91911 | overlap 2182537 ATCGCGAATCTGATC CCCTTTGCCA TAAAT TGGCAAAGGC TTTCCTTCCAGTGCG TERM 2898 2182537 - 2182559 + g 75 -12.1 -2.94825 | overlap 2182536 TCGCGAATCTGATCC CCTTTGCCA TAAAT TGGCAAAGG CTTTCCTTCCAGTGC TERM 2899 2182761 - 2182773 + g 80 -9.1 -4.20696 | opp_overlap 2182759 TTCAGTAAATAACGG CAGCG TAA CGCTG TTTTCAACTTCATCA TERM 2900 2183371 - 2183352 - R 71 -7.8 -3.86897 | TCGACTTGTTACAAA CCTCGCCC AGCA GGGCAAAG CTCACTAAAACTTAA TERM 2901 2183550 - 2183499 - R 100 -10.1 -4.75518 | opp_overlap 2183499 TATACAAAACTAAAA CGGCAGTCAACACTCGCTTCAGC CAACTT GCCGCTTCGAATGTTCACTGCCG TTATTATGTTTATCA galF 2184486 - 2183593 - | UTP-glucose-1-phosphate uridylyltransferase wcaM 2186067 - 2184664 - | putative colanic acid biosynthesis protein wcaL 2187298 - 2186078 - | putative glycosyltransferase (colanic acid gene cluster) wcaK 2188575 - 2187295 - | colanic acid biosynthesis protein wzxC 2190075 - 2188597 - | putative transmembrane transport protein (colanic acid gene cluster) wcaJ 2191571 - 2190177 - | putative extracellular polysaccharide biosynthesis protein TERM 2902 2190237 - 2190224 - G 72 -2.4 -4.86033 | overlap 2190212 AAATCGTCAGAAAAA CGAT TTTGAT ATCG AACCAAATACTCCAT cpsG 2192995 - 2191625 - | phosphomannomutase manC 2194542 - 2193106 - | mannose-1-phosphate guanylyltransferase TERM 2903 2194302 - 2194330 + g 76 -11.7 -3.01924 | opp_overlap 2194300 GCTCAAGAATAATGT TCTCCGTCAGCTT ATT GAGCTGGCGGAGC TGTTCGGCAACGATA TERM 2904 2194376 - 2194349 - G 73 -5.5 -4.5442 | opp_overlap 2194335 TCGGCAACGATAAAA CGGTGCTGTTC GTTACA GATCACCACCG GGCTTTCGCACTCCA wcaI 2195768 - 2194545 - | putative glycosyltransferase wcaH 2196238 - 2195765 - | putative O-antigen biosynthesis protein wcaG 2197206 - 2196241 - | GDP-fucose synthetase TERM 2905 2196662 - 2196647 - G 72 -11.8 -2.83403 | overlap 2196646 GCGGCCTCATGAAAG CGGCGC AGCA GCGCCG GGATCACATGTGAAT TERM 2906 2196905 - 2196938 + g 74 -11.1 -3.24235 | overlap 2196903 CCGAGAAACAGCAGT TTGTTCACGTTGTGC AGGT GCGCGGCGTGAATAA TGTTGCTCTCTATCA gmd 2198330 - 2197209 - | GDP-mannose 4,6-dehydratase TERM 2907 2197289 - 2197321 + g 70 -9.1 -3.71649 | overlap 2197290 2197292 2197298 CCTCCAGATCGTTCG CCACCATCTCGGAGA CCA TCTCCGACAGGGTGA TTTCCGGTTTCCAGC TERM 2908 2197290 - 2197320 + g 76 -12.6 -2.82668 | overlap 2197289 2197292 2197298 CTCCAGATCGTTCGC CACCATCTCGGAGA CCA TCTCCGACAGGGTG ATTTCCGGTTTCCAG wcaF 2198908 - 2198354 - | acetyltransferase wcaE 2199670 - 2198924 - | glycosyltransferase wcaD 2200897 - 2199683 - | colanic acid polymerase TERM 2909 2199780 - 2199770 - GR 76 -3.2 -5.055 | TGAACCGGTAAAAAA CAGT GAC ACCG GCGTAAAAAGATAGA TERM 2910 2200394 - 2200381 - GR 71 -4.5 -4.64861 | CCGGTTCAAAATAAA GCGCA GTGG TACGC TTACCGCCAAATTTT wcaC 2202089 - 2200872 - | glycosyltransferase TERM 2911 2200967 - 2200950 - GR 71 -7.7 -3.84825 | gap 1 GCTACGCATACGAAA GGCGTCCA GCG TGG-CGCC AAATACCGCCTGAGC TERM 2912 2201522 - 2201511 - GR 73 -5.8 -4.41348 | overlap 2201513 GCTCGGCGAAATAAA CTGG CAGC CCAG CCGCAGCATGTCCCG wcaB 2202574 - 2202086 - | putative acetyltransferase TERM 2913 2202324 - 2202309 - G 80 -9 -4.19238 | opp_overlap 2202283 2202311 TGGCGAATGGTAAAA TCGTCG CCGG CGACGA CATGTTTGTTAATCA wcaA 2203419 - 2202577 - | colanic acid biosynthesis glycosyl transferase TERM 2914 2203479 - 2203498 + r 76 -4.8 -4.88687 | overlap 2203481 GGCCTACAGTCACAG GCCGCGCC ATCC GGCACGCC TTATTTTTTATTTGG wzc 2205665 - 2203506 - | tyrosine-protein kinase wzb 2206111 - 2205662 - | putative protein-tyrosine phosphatase wza 2207172 - 2206117 - | putative polysaccharide export protein TERM 2915 2206375 - 2206365 - G 74 -2.4 -4.99861 | GACGAATCACAAAAA TGCC GCT GGCG TTGGAGGTGGTCAGA TERM 2916 2208128 - 2208153 + G 78 -6.9 -4.62069 | gap 1 GCTGGCGTCAATCTC GTGGC-TGGTCA CCT TGACTAAGCCGC TTTTTAGCGTACAGG yegH 2207931 - 2209511 + | hypothetical protein TERM 2917 2209543 - 2209583 + T 76 -11.9 -2.71791 | gap 2, overlap 2209542 CCGGCCTGCTTACCA GGCAG-GCCGGA-GGCGCG TTAGC CTTGCCATCCGGCTCTGCC CTTTGGCCAAAAACT asmA 2211453 - 2209597 - | putative outer membrane assembly protein TERM 2918 2210083 - 2210100 + g 73 -5.5 -4.55128 | TTCGAGGCGCGTATT GCTCATG TCAA CATGCGC TTTTCCTTTCCAGCT TERM 2919 2211007 - 2210982 - G 80 -8.9 -4.09685 | TTTCATGCTGGAAAA CCAGCACGCTG TCGG CAACGCGCAGG CTACGAATATCAAAC dcd 2212073 - 2211492 - | deoxycytidine triphosphate deaminase udk 2212805 - 2212164 - | uridine kinase TERM 2920 2213820 - 2213840 + G 95 -5.4 -5.31158 | gap 1 ATGTGGAGTGCGGTG CGCCTGCCG CGAA TGG-AGGCG TTTTTAATTTTTTTA yegE 2213136 - 2216126 + | hypothetical protein alkA 2216963 - 2216094 - | DNA-3-methyladenine glycosidase II TERM 2921 2217947 - 2217925 - g 74 -4.7 -4.81249 | GGCGAAACCGAAAAA GGCATCGCC CTACC GGTGCTGCC GTGGTGGAACGCCGT yegD 2217097 - 2218449 + | hypothetical protein TERM 2922 2218626 - 2218645 + F 86 -11.4 -3.71649 | overlap 2218636 CCTTTCCTTATTTTG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG SEN2122 2218890 - 2220131 + | putative efflux system protein TERM 2923 2221243 - 2221291 + G 72 -2.2 -4.92239 | overlap 2221245 2221246 2221248 2221258 CGCCACAATTATTCC CGGCGTCGCCGTACCGCTGTCG CTTAT CGGCACCTTTGCGGTGATGGTG TTTTTGGATTTTTCC TERM 2924 2221427 - 2221415 - g 84 -6.2 -5.1286 | opp_overlap 2221415 GAAAAAGGAGAAAAA CCGC TGGCG GCGG CGCTCAAAGGCGCGG TERM 2925 2222668 - 2222652 - g 80 -4.3 -5.1287 | overlap 2222653 TCGATACGGAAAAAA CGCTCGC CCT GCCAGCA GATATTACAACGCAG TERM 2926 2222706 - 2222735 + G 76 -9.9 -3.78934 | overlap 2222707 GTAGTACGCTCGCCT TCCAGGCGGCGCT AGGC AGCACCGTCTGGC TTATTGTCGCCGCCG TERM 2927 2222707 - 2222734 + G 81 -13.4 -2.87146 | overlap 2222706 TAGTACGCTCGCCTT CCAGGCGGCGCT AGGC AGCACCGTCTGG CTTATTGTCGCCGCC yegN 2220131 - 2223253 + | putative RND-family transporter protein TERM 2928 2226029 - 2226013 - g 76 -3 -5.07486 | gap 1, opp_overlap 2226013 2226015, overlap 2225995 2226015 CATTGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG yegO 2223254 - 2226334 + | putative RND-family transporter protein TERM 2929 2227155 - 2227173 + G 86 -12.4 -3.86015 | overlap 2227145 TTTTGCCGGGCGTAT CGGCAGCG GTA TGCTGCCG TTTATGACGCCGGTC TERM 2930 2227655 - 2227675 + G 73 -5.5 -4.57569 | TATGTATGGCGGTTA TTATCGC GCTACCG GCGATAA TTTTTGCCCGCGTGC yegB 2226331 - 2227743 + | putative transporter protein TERM 2931 2228266 - 2228288 + G 95 -9.8 -4.7254 | opp_overlap 2228266, overlap 2228257 TCGTGGCGTTATCAA CGTTGCTGGC CGC GCTGGCGACG TTTTTGCTGGCGCGT baeS 2227743 - 2229146 + | putative two-component system sensor kinase baeR 2229143 - 2229865 + | putative two-component system response regulator TERM 2932 2230251 - 2230264 + G 82 -5.3 -4.98857 | GAAAATATCCAGCGC TGGTT AAGC AACCA TTTTTATCGTTGGAT TERM 2933 2230567 - 2230555 - g 79 -3.3 -5.1861 | overlap 2230556 CGGAGCATCAAAAAA TGCAG CGC CTGCG TGAACAAGGTTGGTA SEN2128 2230134 - 2231336 + | hypothetical protein TERM 2934 2231418 - 2231398 - g 100 -4.6 -6.02345 | overlap 2231402 CAACTACAAAAAAAA CAAACCGC TGATT GCGGCCCG TATCGCCGAGGAGAA TERM 2935 2231414 - 2231402 - g 95 -6.2 -5.39407 | overlap 2231398 TACAAAAAAAACAAA CCGC TGATT GCGG CCCGTATCGCCGAGG TERM 2936 2231657 - 2231623 - g 77 -8.4 -4.18018 | opp_overlap 2231622 GGGCTTGAGCGAAAA CCTCGACGGCGCGGCG TTA CGCCACAAGGTTGAGG ATATCTTACGCCGCT SEN2129 2231336 - 2232052 + | hypothetical protein TERM 2937 2232135 - 2232119 - g 72 -2.1 -4.98255 | overlap 2232120 GTGCAACCACAAAAA TCCCCTC AAT GACGGGC AACGAGAGTGGCATA TERM 2938 2232364 - 2232350 - g 70 -3.4 -4.7254 | overlap 2232351 2232352 AGCGCTGATCAAAAA CTGGCA GCG CGCCCG CCCCCGCTCCACTCA SEN2130 2232063 - 2234174 + | hypothetical protein TERM 2939 2234931 - 2234914 - g 71 -6.3 -4.34008 | overlap 2234930 CAGGAAGGAAAAGAA GACGTTG TCGG CAACATC GTGCATAAGCACGAA yegQ 2234290 - 2235651 + | putative protease TERM 2940 2235785 - 2235816 + T 100 -9.5 -5.13473 | overlap 2235788 CCAGGAACCACCTCC TTGGCCTGCGTAA TCTCCC TTACGCAGGCTTA TTTTTTGCGTATAAT TERM 2941 2235788 - 2235813 + T 100 -13.4 -4.65666 | overlap 2235785 GGAACCACCTCCTTG GCCTGCGTAA TCTCCC TTACGCAGGC TTATTTTTTGCGTAT SEN2133 2236706 - 2236290 - | hypothetical protein SEN2134 2237163 - 2236828 - | hypothetical protein SEN2135 2237641 - 2237525 - | hypothetical protein TERM 2942 2238207 - 2238193 - R 74 -8.5 -3.99805 | opp_overlap 2238192 CCGGAAAAACTTAAA GCCGC GTTGG GCGGC GTCTCCTATCTTATT TERM 2943 2238641 - 2238662 + r 100 -11.6 -4.78572 | TAACACCAGTCGCTG GCCGGATG CGCTCA CATCCGGC TTTTCTTCGTTGAAC fbaB 2239730 - 2238678 - | fructose-bisphosphate aldolase class I TERM 2944 2240090 - 2240078 - g 83 -6.2 -4.87803 | TATGGCTAAATAAAA GCGG GTTTT CCGC CGGTGAAATAGGCTG TERM 2945 2240150 - 2240171 + G 90 -5.1 -5.24129 | overlap 2240142 2240151 TCCTGTCGCCGATTC TGGTCGG CTCCGTTA CCGACCG TTTTTTCTCAGCGCA TERM 2946 2240604 - 2240620 + G 77 -3.7 -4.99312 | GCTGGTTCTGCTGCG CGATAAA AAC TTTCTCG TTTTCTTCTTCTGTT TERM 2947 2240730 - 2240712 - g 77 -4.5 -4.86621 | opp_overlap 2240721 AGTGGGAATGAAAAA CGCCACC GGCTG GATGACG CTCGGCCAGTTCTCT TERM 2948 2240834 - 2240844 + G 81 -2.4 -5.4251 | overlap 2240825 TTATTACCGCCGCGA TCCG CTA CGGC TTTTTTGTCTATGGC yegT 2239984 - 2241255 + | putative nucleoside permease yegU 2241252 - 2242256 + | putative hydrolase yegV 2242358 - 2243218 + | putative sugar kinase yegW 2243938 - 2243192 - | putative gntR-family transcriptional regulator thiD 2244774 - 2243974 - | phosphomethylpyrimidine kinase TERM 2949 2244429 - 2244440 + g 74 -7.2 -4.08216 | opp_overlap 2244429, overlap 2244427 CAGAGGGCGAGAGCA GCGG ATCG CCGC TTTTCGCCAGCATCA thiM 2245558 - 2244761 - | Hydroxyethylthiazole kinase SEN2144 2245968 - 2246282 + | hypothetical protein TERM 2950 2246320 - 2246283 - T 77 -10.7 -3.37796 | opp_overlap 2246283 2246280 2246279, overlap 2246288 2246290 2246309 TTTTATCATCGATAA TGATATACGCACTCTTT CTAT AAAGAGTGCGTACCGCA TAAATTTAATTATAA TERM 2951 2246315 - 2246288 - T 93 -15.8 -2.97245 | opp_overlap 2246283 2246280 2246279, overlap 2246283 2246290 2246309 TCATCGATAATGATA TACGCACTCTTT CTAT AAAGAGTGCGTA CCGCATAAATTTAAT TERM 2952 2246313 - 2246290 - T 85 -14 -3.03741 | opp_overlap 2246283 2246280 2246279, overlap 2246288 2246283 2246309 ATCGATAATGATATA CGCACTCTTT CTAT AAAGAGTGCG TACCGCATAAATTTA pegD 2247348 - 2246326 - | hypothetical protein pegC 2249757 - 2247364 - | putative outer membrane usher protein pegB 2250610 - 2249879 - | putative fimbrial chaperone protein TERM 2953 2250527 - 2250502 - G 74 -7.5 -4.18367 | TACCATATATATAAA TGCCGCTCCAC GCAG GCATAGCGGCA CAAGCCAGGCATAAT TERM 2954 2250607 - 2250588 - G 86 -12.2 -3.77193 | ATAAAAGAGATACAA GCGGCTAA AAGC TTAGCCGC CAAAAAACGATTGTT TERM 2955 2250627 - 2250615 - R 72 -2.7 -5.02074 | overlap 2250616 TTAGCCGCCAAAAAA CGATT GTT AATCA GTTAATACCGTCATC pegA 2251154 - 2250621 - | putative fimbrial subunit protein TERM 2956 2251414 - 2251385 - R 100 -18.1 -5.82036 | ACAACAAATAAAAAA GCCCATATCATTG ATAT CAATGATATGGGC CTGCGGAATTAATAA yehE 2251714 - 2251433 - | hypothetical protein TERM 2957 2251921 - 2251966 + r 83 -10.7 -3.82946 | opp_overlap 2251924 2251926 2251960, overlap 2251924 2251926 2251928 GGGCTATTATTTTAT TAATACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCATA TTCTCTTTGGAATAC TERM 2958 2251963 - 2251924 - R 90 -14.6 -3.17212 | opp_overlap 2251924 2251921 2251926 2251928, overlap 2251926 2251960 CTATTATTTTATTAA TACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTC ATATTCTCTTTGGAA TERM 2959 2251924 - 2251964 + r 79 -10.8 -3.49634 | gap 1, opp_overlap 2251924 2251926 2251960, overlap 2251921 2251926 2251928 CTATTATTTTATTAA T-ACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCA TATTCTCTTTGGAAT TERM 2960 2251926 - 2251961 + r 93 -15 -2.88134 | opp_overlap 2251924 2251926 2251960, overlap 2251924 2251921 2251928 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 2961 2251961 - 2251926 - R 100 -17.2 -3.1478 | opp_overlap 2251926 2251924 2251921 2251928, overlap 2251924 2251960 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 2962 2251928 - 2251959 + r 78 -11.8 -2.97857 | opp_overlap 2251926 2251924, overlap 2251926 2251924 2251921 TATTTTATTAATACA TTCACTGCATCAAT ATAT ATTAATGCAGTGAA TGTCATATTCTCTTT mrp 2253101 - 2251992 - | hypothetical protein TERM 2963 2253797 - 2253835 + G 81 -2.2 -5.35815 | opp_overlap 2253780 GAGCCGAAATCCGTG GTGTCCGGCGCGACGC CGGTAAT GCGTGACTCCGAGCAC TTTTTCTTTGATCTG TERM 2964 2255182 - 2255194 + G 70 -9.1 -3.63627 | CGCCAACCTCGCGCC GCGCA AAA TGCGC TTTGGCGTCTCCGAG metG 2253266 - 2255299 + | Methionyl-tRNA synthetase TERM 2965 2255307 - 2255324 + F 100 -12.7 -5.03145 | opp_overlap 2255300 2255307 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA TERM 2966 2255324 - 2255307 - f 95 -12.7 -3.93237 | opp_overlap 2255307, overlap 2255300 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA yehR 2255540 - 2255998 + | putative lipoprotein TERM 2967 2256042 - 2256061 + F 100 -11.4 -5.01553 | overlap 2256036 GGTAAAGTCGCTCAG GGCGCTGC TTCG GCAGCGTC TTTTCTTTATGAATT TERM 2968 2256100 - 2256086 - f 76 -4.2 -5.055 | overlap 2256088 TGAATTCCGAAAAAA GACAGC CTC GCTGTA AGTCCCCTCGCCAAA TERM 2969 2256098 - 2256088 - f 71 -6.8 -4.15235 | overlap 2256086 AATTCCGAAAAAAGA CAGC CTC GCTG TAAGTCCCCTCGCCA SEN2150 2256170 - 2256700 + | putative lipoprotein yehS 2257224 - 2256757 - | hypothetical protein yehT 2257990 - 2257271 - | putative two-component system response regulator yehU 2259672 - 2257987 - | putative two-component system sensor kinase TERM 2970 2259839 - 2259824 - H 79 -3.2 -5.31456 | TTAATGCATAAAAAA CAGGCA AAAC TTCCTG GTTCGTAAAAGAGCG TERM 2971 2260495 - 2260512 + G 71 -9.9 -3.53012 | GCGCATTCGCTTAGC CAGTTCC GCCC GGAACTG TTTGACGGCAAGACG TERM 2972 2260561 - 2260551 - g 74 -6.8 -4.37092 | overlap 2260552 2260554 2260556 ATGGTGCGGAGAAAA CCAG ACG CTGG CGCAGCAGCAGCAAC yehV 2259895 - 2260626 + | putative transcriptional regulator SEN2155 2260686 - 2260793 + | hypothetical protein yehW 2261505 - 2260774 - | putative permease transmembrane component yehX 2262436 - 2261489 - | ABC transporter ATP-binding protein TERM 2973 2261829 - 2261853 + g 95 -17.9 -2.80816 | opp_overlap 2261803 2261826 ATCAGCACCAGATGG TCGGCGAGGCG TAG CGCCTCGTCGA TGTCGTGCGTCACCA yehY 2263598 - 2262429 - | putative permease transmembrane component TERM 2974 2263375 - 2263346 - G 81 -3.6 -5.22006 | gap 2 GCATGACAATAAAAA GCGT-CTG-CGCCA TCAT CAGCGTCAGTACGC TACCGCGTTTACCGG yehZ 2264519 - 2263602 - | putative periplasmic protein TERM 2975 2263869 - 2263891 + g 83 -9.9 -4.15044 | gap 1 GTCGGTGCCATACGC CATCGCGGCG TTAA CGCCG-GATG TTTGTTGCGCGGCGG TERM 2976 2264279 - 2264256 - G 76 -3 -5.03314 | opp_overlap 2264261 2264262, overlap 2264261 TTCATCTTTAAAAAA GAACGCCCCG TTAC CGGTGTATTC CGGATAGATATCCAG bglX 2266997 - 2264700 - | periplasmic beta-glucosidase precursor TERM 2977 2267386 - 2267408 + G 88 -11.2 -4.18164 | CAAGGGTTTCCGTTC CGGTCAGGGC GAC GCGCTGGCCG TTGTTTTCCCGGGTT TERM 2978 2268030 - 2268047 + G 71 -4.7 -4.66833 | overlap 2268031 TTGAATCTTCCGGCT GCGCCGG AAAA CTGGCGG TTTTTGCCGTTCGCC TERM 2979 2268504 - 2268516 + G 70 -6.9 -4.19678 | opp_overlap 2268503 2268504 ATGAATTTTTTAAAT CCGCT GAG GGCGG TTTCTTCACCTGTAC TERM 2980 2268567 - 2268587 + G 70 -9.7 -3.44146 | CCTTCCTGCACCGCT TCGCCGC TGCTGGC GCGGCGA TTCGTTATCAGGCCG dld 2267264 - 2268994 + | D-lactate dehydrogenase pbpG 2270000 - 2269053 - | penicillin-binding protein TERM 2981 2269096 - 2269112 + g 91 -6.5 -5.2197 | overlap 2269080 2269091 GCGCTGGCGCTGGCT GCCGC CATTTGC GCGGC TTTTTGCTTTTTATA TERM 2982 2270119 - 2270142 + r 71 -6.8 -4.07687 | gap 1, overlap 2270136 2270137 CGCTACAGAAGAATC GTCAGCAAATG CTG CAT-TGCTGGC TTTTGCGCCAGCCCT yohC 2270753 - 2270166 - | hypothetical protein TERM 2983 2270676 - 2270688 + g 73 -6.3 -4.44277 | GTGCGTATAGTGATG CGAAA CGG TTTCG TTTTCGCTTTTGATC TERM 2984 2270864 - 2270849 - H 71 -6.8 -4.07885 | gap 1, opp_overlap 2270840 TAGTCTCCGGCAAAA CGTCGGC TTT GCCG-CG CACGCCTCTTGCCAG yohD 2270885 - 2271481 + | hypothetical protein TERM 2985 2271485 - 2271528 + T 72 -5.8 -4.46233 | opp_overlap 2271483 2271484 2271507 2271508, overlap 2271516 GAGGCCCGTTAAACC CGATGGTATCCGGATGGC ATAACGCC GCCATCCGGCACCCGGCG TTTATTTGGCGTTGA yohF 2272291 - 2271530 - | putative oxidoreductase yohG 2273793 - 2272357 - | putative lipoprotein TERM 2986 2272843 - 2272831 - G 73 -6.2 -4.39426 | GATATCGGGATAAAA CGCG GCCTT CGCG GCGTCAATGCTGCTC TERM 2987 2273296 - 2273317 + g 87 -8.6 -4.58395 | overlap 2273286 TTTGACCGCCCCGAT CCGCGCGG TAACTT CAGCGCGG TTTTTCCCCCATAAA TERM 2988 2274197 - 2274233 + r 77 -10.8 -3.30771 | overlap 2274196 GATGATTTTCTGATT CCTGCGCCGGGCAG CGATAGTAT CTGCCCGGCACACG TTCTGGACGCTGTAG yohI 2275190 - 2274252 - | hypothetical protein TERM 2989 2274936 - 2274951 + g 77 -8.2 -4.07568 | ATACGATCCCAACGC CGTCGC CCGC GCGGCG TTTTCCGCCAGCCAC TERM 2990 2275233 - 2275213 - R 100 -11.9 -5.58454 | opp_overlap 2275215 TCCACAGCAAAAAAA GAGGCGCTA TCA TAACGCCTC TCTGCGATGAGCAAA SEN2168 2276492 - 2275299 - | putative n-hydroxybenzoate hydroxylase SEN2169 2277151 - 2276507 - | glutathione-S-transferase-family protein SEN2170 2277861 - 2277160 - | FAA-hydrolase-family protein SEN2171 2278914 - 2277877 - | putative gentisate 1,2-dioxygenase SEN2172 2280284 - 2278926 - | putative n-hydroxybenzoate transporter SEN2173 2280410 - 2281318 + | putative transcriptional regulator TERM 2991 2281506 - 2281525 + G 84 -5.7 -5.10461 | TTTTGTATTGATTTA TGCCTGT TTGTAC GCAGGCA TTTTTCTTGCATCAC yohJ 2281450 - 2281848 + | hypothetical protein TERM 2992 2281870 - 2281889 + G 75 -6.4 -4.56597 | ATATCTGGTGGTCGT TACCGCTG ACGC TGGCGGTA TTTTTCGCCGCCCGC TERM 2993 2281893 - 2281918 + G 86 -10.3 -4.14511 | ACGCTGGCGGTATTT TTCGCCGCCCG CCGA CTGGCGGCGCA TTTTAAAATGCCGTT yohK 2281845 - 2282540 + | puatative membrane protein cdd 2282694 - 2283578 + | cytidine deaminase TERM 2994 2284346 - 2284356 + G 95 -8.2 -5.00884 | opp_overlap 2284346 CTCTATATTTTTAAA CGCG AAC CGCG TTTTTTAGGCCCGCT sanA 2283755 - 2284474 + | vancomycin resistance protein b2145 2284471 - 2284716 + | hypothetical protein TERM 2995 2285402 - 2285386 - g 76 -5 -4.75372 | overlap 2285388 ACCATTTACGAAAAA CAGCCG CAGCC CGGCGG ATGGCTGCGTCACGG TERM 2996 2285413 - 2285388 - g 71 -7.5 -3.99327 | overlap 2285386 CATTTACGAAAAACA GCCGCAGCC CGGCGGAT GGCTGCGTC ACGGCATCCCGGCAT SEN2179 2284921 - 2286162 + | putative oxidoreductase TERM 2997 2286644 - 2286630 - g 71 -4.2 -4.57073 | opp_overlap 2286635 GAGCTGGTTGAAAAA TACTGC CGC GCCGTA AAACGCGGTTCATCT yeiA 2286156 - 2287391 + | putative oxidoreductase TERM 2998 2287433 - 2287405 - T 74 -10.2 -3.16683 | gap 1, opp_overlap 2287406 AGCTCACGGTATGAA GCCCGGCGC-GCA GTTT CGCTGCGCCGGGT TATCTGATAAGCAAA TERM 2999 2287406 - 2287432 + T 90 -13 -3.54475 | gap 1, opp_overlap 2287405 GCTCACGGTATGAAG CCCGGCGC-GC AGTTTC GCTGCGCCGGG TTATCTGATAAGCAA mglC 2288476 - 2287466 - | galactoside transport system permease protein MglC TERM 3000 2288514 - 2288532 + r 79 -8.2 -4.25052 | opp_overlap 2288508 2288514 2288512, overlap 2288508 2288509 TGCAAAGAAGCAAGA CGCAAAAT TTC GTTTTGCG TTGTTGTTTTAGTAT mglA 2290012 - 2288492 - | galactoside transport atp-binding protein mgla mglB 2291144 - 2290146 - | D-galactose-binding periplasmic protein precursor TERM 3001 2290247 - 2290263 + g 91 -10.1 -4.57569 | TGCCGTCAGCCGCGC CCTTGCC TTC GGCGAGG TTTTTCGCCAGATCG TERM 3002 2291614 - 2291597 - R 72 -6.3 -4.21989 | overlap 2291587 CACAATGTTAATAAA CTGTGAA TTTA CTCACAG ATTGAAAACGGTTAC galS 2292665 - 2291643 - | mgl repressor and galactose ultrainduction factor yeiB 2293957 - 2292815 - | hypothetical protein TERM 3003 2293187 - 2293169 - G 100 -12.4 -5.06414 | CGCCTGCAATAAAAA GGCGCACC AGC GGTACGCC CAGTCCAGCCGCCAT folE 2294640 - 2293972 - | GTP cyclohydrolase I yeiG 2294970 - 2295827 + | putative esterase SEN2188 2296205 - 2295816 - | putative DNA-binding protein SEN2189 2297577 - 2296210 - | putative L-serine dehydratase SEN2190 2297794 - 2298681 + | putative hydrolase SEN2191 2298714 - 2300036 + | putative regulatory protein TERM 3004 2300077 - 2300037 - T 77 -10.3 -3.30124 | opp_overlap 2300041, overlap 2300039 2300040 CTGCATCGGTTATAA CATTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTCTC TGTCAGAAACGGTAA TERM 3005 2300075 - 2300039 - T 83 -12.9 -3.21924 | opp_overlap 2300041, overlap 2300037 2300040 GCATCGGTTATAACA TTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTC TCTGTCAGAAACGGT TERM 3006 2300074 - 2300040 - T 95 -16.4 -2.5294 | opp_overlap 2300041, overlap 2300039 2300037 CATCGGTTATAACAT TCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGT CTCTGTCAGAAACGG TERM 3007 2300041 - 2300073 + T 100 -19.2 -2.98823 | opp_overlap 2300040 2300039 2300037 ATCGGTTATAACATT CTGGCGACAGCGGC AAAAC GCGGCTGTCGCCAG TCTCTGTCAGAAACG cirA 2302071 - 2300080 - | colicin I receptor precursor TERM 3008 2301250 - 2301262 + g 76 -5.5 -4.82901 | CAACGCATAGTTTTG CCGTT CCA GACGG TTTTTATCCAGCGAG TERM 3009 2302339 - 2302322 - R 100 -11.3 -6.07374 | AGAAAAAACAAAAAA CCCTCTC GAAT GAGAGGG TTAGAAGAGTCAGAT lysP 2303886 - 2302417 - | lysine-specific permease TERM 3010 2302852 - 2302842 - G 71 -8.2 -3.85698 | overlap 2302843 CGGTGGTGGCATAAA GCGC ATT GCGC GGTACGCCGCCGCGG TERM 3011 2303744 - 2303731 - G 74 -3.1 -4.92791 | gap 1, overlap 2303733 CAGAATATAAGAAAA CA-GCG CGC CGCCTG GCCCCGCCTGAGAAA TERM 3012 2304054 - 2304041 - R 71 -3.7 -4.80882 | opp_overlap 2304043, overlap 2304042 2304043 AGCGGATACTAAAAA TGGCG ATGC CGCCC GGGCAGCCCTCCTCT yeiE 2304939 - 2304076 - | putative transcriptional regulator TERM 3013 2306026 - 2306011 - g 76 -3.2 -5.09225 | AGCGCATTGAAAAAA GCGG GGGCGAAA CCGC TGCTGATGGCGCTGG yeiH 2305060 - 2306109 + | hypothetical protein TERM 3014 2306261 - 2306278 + G 70 -7 -4.07568 | overlap 2306260 GCGCGGCTGAAATTG GCGCAA CGGCCT TTGCGC TTTTCACAAAAAACC TERM 3015 2306483 - 2306446 - g 83 -7.8 -4.58283 | gap 1, overlap 2306472 GAAGCGCTGGAAAAA TCAC-GCGATGCCTTTC TCGAT GAAATGCAGCGCTGTGA ACAACTCGGCTTAAC nfo 2306188 - 2307045 + | endonuclease IV TERM 3016 2307064 - 2307101 + T 95 -12.9 -3.73486 | opp_overlap 2307074, overlap 2307074 TCAATGTTCTTCAGG CAATAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTAGCG TGTTTCTCTTATGCC TERM 3017 2307074 - 2307091 + T 100 -11.3 -5.10077 | opp_overlap 2307074, overlap 2307064 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT TERM 3018 2307091 - 2307074 - T 100 -11.3 -5.4833 | opp_overlap 2307064 2307074 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT fruA 2308798 - 2307110 - | PTS system, fructose-specific IIBC component fruK 2309672 - 2308815 - | 1-phosphofructokinase fruF 2310883 - 2309753 - | pts system, fructose-specific IIA/FPR component TERM 3019 2310784 - 2310810 + g 71 -10.1 -3.55563 | gap 1, opp_overlap 2310770, overlap 2310804 2310806 AGCCGCCCGCCACAT TCCCCGCCTGCG CTAA CGC-GGCGGCGA TTTGCCGAATGGCCT TERM 3020 2310970 - 2310935 - H 86 -2.7 -5.67967 | gap 2 ACTATGAGAAAAAAA GCGCCAATCTGAGTTAT CAAA AAAAC-CAGATC-GCGC TGAAACGTTTCAAGA TERM 3021 2311083 - 2311105 + H 93 -6.2 -5.64421 | opp_overlap 2311083 AACAGACCCTCAATA GCTGACGCAT AAA AGGCTTCAGC TTTTTTCTTTCAGCT TERM 3022 2312147 - 2312172 + G 87 -13.3 -3.18681 | overlap 2312148 GCTTTTATGCGGGGA TGTTGCTGGCG CACG CGCCGGCAACG TTACTCGGCTTGCAG TERM 3023 2312148 - 2312171 + G 81 -14.6 -2.50994 | overlap 2312147 CTTTTATGCGGGGAT GTTGCTGGCG CACG CGCCGGCAAC GTTACTCGGCTTGCA setB 2311252 - 2312433 + | sugar efflux transporter SEN2201 2313162 - 2312497 - | hypothetical protein TERM 3024 2312705 - 2312725 + g 72 -2.6 -4.83615 | AAGGATAGCTTTGCA TATGTTTC CGTTT GTAACATA TTTTTATGCACGCTA SEN2202 2313286 - 2313164 - | hypothetical protein TERM 3025 2314004 - 2313986 - g 85 -4.6 -5.27335 | overlap 2313967 TTGTCCAAAGAAAAA TCCAGATT TAA AATGTGGA CGTCATCATGATCAG SEN2203 2313714 - 2314118 + | hypothetical protein TERM 3026 2314450 - 2314424 - g 89 -13.8 -3.59247 | overlap 2314415 GAAGAACGTTTCAAA GGCGACGATATC GTT GATACCGTCACC CTGAGCCGTCGCGGC SEN2204 2314253 - 2314825 + | elongation factor P-like protein TERM 3027 2314853 - 2314867 + F 82 -5.6 -5.10665 | overlap 2314837 2314852 TCGGCTGCGCCCCAG GGCGCA GTC TGCCCC TTTTATTTATTGACT yeiR 2315038 - 2316024 + | hypothetical protein yeiU 2316054 - 2316773 + | hypothetical protein TERM 3028 2316789 - 2316824 + F 73 -7.8 -4.01853 | gap 1, opp_overlap 2316787 2316789 CCCATGTAATTAACA TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGATAA TTTATGATGATATTC TERM 3029 2317735 - 2317721 - g 82 -5.6 -5.0538 | CCGTACTGGAAAAAA CGCTAC AAT GAAGCG CGTCGAGTTCTGAGC spr 2317187 - 2317759 + | putative lipoprotein TERM 3030 2317806 - 2317833 + F 74 -11.4 -2.90804 | opp_overlap 2317811, overlap 2317811 CTGATGAGACGACAT AAAAAGCACTGC TTCG GCAGTGCTTTTG CTTATTATCCCTTCT TERM 3031 2317811 - 2317828 + F 95 -11.3 -4.59414 | opp_overlap 2317811, overlap 2317806 GAGACGACATAAAAA GCACTGC TTCG GCAGTGC TTTTGCTTATTATCC TERM 3032 2317828 - 2317811 - f 100 -11.3 -5.02502 | opp_overlap 2317811 2317806 GAGACGACATAAAAA GCACTGC TTCG GCAGTGC TTTTGCTTATTATCC TERM 3033 2318000 - 2317974 - f 74 -10.2 -3.22653 | overlap 2317972 2317975 ACTACTGCGACAATA CGCTTTCCTGCG CAT CACAGAAAAGCA TGACTATCCGGGGTA TERM 3034 2317999 - 2317975 - f 73 -11.5 -2.53271 | overlap 2317974 2317972 CTACTGCGACAATAC GCTTTCCTGCG CAT CACAGAAAAGC ATGACTATCCGGGGT rtn 2318085 - 2319641 + | rtn protein TERM 3035 2319831 - 2319817 - g 77 -8.6 -4.10552 | GCCCAGGAAATCAAA GAAAGC TAC GCTTTC GCCGTACTCGGCGAA yejA 2319748 - 2321553 + | putative transport system periplasmic binding protein TERM 3036 2322250 - 2322278 + G 86 -10.9 -4.08767 | opp_overlap 2322248 TTGTGGCATATTACG CTGCCGGTGTTGG CGA CCGTCATCGGCGG TTTTGCCGCCCTGAC yejB 2321563 - 2322657 + | putative binding-protein-dependent transporter TERM 3037 2323638 - 2323658 + G 71 -8.1 -3.80573 | CTGCTGATTTTTATC GGCGAAGCG GTA CGCGACGCC TTTGATCCTGCTAAG yejE 2322657 - 2323682 + | putative binding-protein-dependent transporter TERM 3038 2324040 - 2324023 - g 73 -5.5 -4.59109 | opp_overlap 2324013 CATACGCTGGAAAAA CAGCTCT ATGA AGTGCTG TCGCTCCATCGGGGA TERM 3039 2324677 - 2324660 - g 71 -4.8 -4.60487 | opp_overlap 2324660 2324676 CAGGATCGGGAAAAA GCACCA CCGGTC TGGCGC TGTTACGGCTTATCC yejF 2323684 - 2325273 + | putative ABC-transporter ATP-binding protein yejG 2325621 - 2325277 - | hypothetical protein bcr 2327202 - 2326012 - | bicyclomycin resistance protein TERM 3040 2326620 - 2326642 + g 75 -11.2 -3.44848 | opp_overlap 2326617 2326618, overlap 2326618 GAATATGAAAAGGCT GACGCCGCTC AAC GGGCAGCGTC TCTTTAATCAGAGCA rsuA 2327925 - 2327230 - | ribosomal small subunit pseudouridine synthase TERM 3041 2327973 - 2327957 - H 72 -8.7 -3.81258 | GTAATAATACGGAAA TCGGGCA TTC TACCCGA AAAAAGGGAATTGCT yejH 2328077 - 2329837 + | putative helicase rplY 2329962 - 2330246 + | 50s ribosomal protein L25 TERM 3042 2330284 - 2330269 - T 100 -11.8 -5.10208 | opp_overlap 2330269 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTATGCGTTTA TERM 3043 2330269 - 2330284 + T 100 -11.8 -5.33866 | opp_overlap 2330269 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTATGCGTTTA SEN2218 2330974 - 2330354 - | hypothetical protein TERM 3044 2330912 - 2330897 - G 72 -4 -4.8083 | gap 1 CAACATCATCAAAAA TGCG-AC AAT GTGCGCA TACAAAACCTGCCGA TERM 3045 2331021 - 2331054 + r 73 -10.9 -2.68775 | overlap 2331018 2331018 TTCTCGCCCGACGTG CGTCGCTGCAACTGC TCGC GCAGATTCGGCGGCG TCCCTTTGATAGTCA yejK 2332009 - 2331002 - | nucleoid-asociated protein yejL 2332189 - 2332416 + | hypothetical protein TERM 3046 2332951 - 2332972 + G 70 -5.1 -4.50988 | overlap 2332953 2332956 2332960 CACGCGCCGTCGCCA TTTCGCAAG GCCG CTTGCGGCA TTCTTTTTCGTCTCC TERM 3047 2332956 - 2332975 + G 72 -2 -4.85177 | overlap 2332953 2332951 2332960 GCCGTCGCCATTTCG CAAGGCCG CTTG CGGCATTC TTTTTCGTCTCCTTT yejM 2332448 - 2334208 + | putative sulphatase TERM 3048 2334375 - 2334392 + T 100 -9.1 -5.76633 | opp_overlap 2334374 2334375 AATTCCCCTTAAAAG CCAGCCT GCCA GGGCTGG TTTTTTTATATATCC sspH2 2337345 - 2334979 - | secreted effector protein TERM 3049 2336925 - 2336959 + g 71 -10.6 -3.28866 | overlap 2336924 2336922 2336926 CCGCGTGTCCTGTGC CCTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCGA TGTGTTTCACTGTAC TERM 3050 2336926 - 2336958 + g 81 -14.1 -2.56838 | overlap 2336925 2336924 2336922 CGCGTGTCCTGTGCC CTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCG ATGTGTTTCACTGTA TERM 3051 2337883 - 2337871 - H 73 -10.5 -3.10344 | opp_overlap 2337869 CTCTGATTTAAGATA CGCCG CAT CGGCG AATAATGTGTCATCT TERM 3052 2338571 - 2338587 + H 72 -5.8 -4.38927 | opp_overlap 2338568, overlap 2338572 2338577 GCGCGGCAATCAGTT TGCGGA CAAAC TCCGCG TTTGTTGTCTGAAGC TERM 3053 2338947 - 2338959 + H 71 -10.5 -2.64354 | overlap 2338949 2338957 CGATGCTGATGACGA GGCGG CTG CCGCC GTTCTGGCTGTGTCA TERM 3054 2338981 - 2339006 + H 72 -5.9 -4.4648 | GCTGTGTCAGCCGAC GCCGCGCTGGC TGAT GCCTCCCCGGC TTTTGTGGTCGCCGT TERM 3055 2339100 - 2339083 - H 76 -8.4 -4.08064 | opp_overlap 2339083 AATTCCCCTTGAAAA CCAGCC TGTCAG GGCTGG TTTTTTTTATGCCTA TERM 3056 2339083 - 2339100 + H 100 -9.1 -5.96219 | opp_overlap 2339083 AATTCCCCTTGAAAA CCAGCCT GTCA GGGCTGG TTTTTTTTATGCCTA SEN2227 2339109 - 2339312 + | hypothetical protein SEN2228 2340067 - 2339504 - | exported protein TERM 3057 2340667 - 2340677 + H 74 -6.8 -4.3534 | TCAGCTAATTACTCG CCTG TCA CAGG TTTTACTACTTACCC narP 2340797 - 2341444 + | nitrate/nitrite response regulator protein NarP TERM 3058 2341481 - 2341448 - T 86 -10.9 -3.82205 | gap 1, opp_overlap 2341445 2341444 2341452, overlap 2341452 GGAATACAGTAACAA GCCAGGCCCGATGGCG CCA CGTCACCGGGCC-GTC AGGGTCTTATTTCTC TERM 3059 2341478 - 2341452 - T 90 -15.8 -2.68142 | opp_overlap 2341445 2341444 2341452, overlap 2341448 TACAGTAACAAGCCA GGCCCGATGGCG CCA CGTCACCGGGCC GTCAGGGTCTTATTT ccmH 2342531 - 2341488 - | cytochrome c-type biogenesis protein H1 TERM 3060 2341740 - 2341755 + g 75 -6.1 -4.56597 | CGCCTCCGCGTAGCC CAGCG CCGCAT CGCTG TTTTTCGGGGCCAGA TERM 3061 2342148 - 2342102 - G 100 -15.6 -3.53012 | opp_overlap 2342121, overlap 2342076 CGCGCGCGCCGCAAA CCGGGGTGTCCGCCGGCAGCGG CTC CCGGCGCAGGCGCACCCGCCGG CGCGTGCGGGCAACG ccmG 2343085 - 2342528 - | thiol:disulfide interchange protein (cytochrome c biogenesis protein ccmg) SEN2232 2345013 - 2343082 - | cytochrome c-type biogenesis protein F1 ccmE 2345489 - 2345010 - | cytochrome C-type biogenesis protein TERM 3062 2345106 - 2345139 + g 71 -10.3 -3.30124 | gap 1 GTTCTCGTCATGCTT GGCCAG-CACCTCCTG CGC CAGGACGTGGCTGCCC TTCTCCAGGGTGCCC SEN2234 2345698 - 2345486 - | heme exporter protein D2 TERM 3063 2345656 - 2345645 - G 100 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TACC CGCC CATGGCGAAAAAATC TERM 3064 2345680 - 2345670 - G 76 -3.2 -5.03314 | CCCATGGCGAAAAAA TCGC TCC ACGA TGAAAATGCCGGACT SEN2235 2346432 - 2345695 - | heme exporter protein C2 TERM 3065 2345848 - 2345809 - G 83 -12.8 -3.25304 | gap 1, opp_overlap 2345816, overlap 2345799 2345810 AAAGAGCAGCAGGAA GCCGGCGATG-GCCCAGCG CAG CGGCGAGCGCATCGCCGGG TCGATACTCTGCTGC TERM 3066 2345847 - 2345810 - G 89 -16.3 -2.54459 | gap 1, opp_overlap 2345816, overlap 2345809 2345799 AAGAGCAGCAGGAAG CCGGCGATG-GCCCAGCG CAG CGGCGAGCGCATCGCCGG GTCGATACTCTGCTG SEN2236 2347140 - 2346484 - | heme exporter protein B (cytochrome C-type biogenesis protein) SEN2237 2347757 - 2347140 - | cytochrome C biogenesis ATP-binding export protein (ec 3.6.3.41) (heme exporter protein A) TERM 3067 2347487 - 2347470 - G 71 -4.7 -4.56597 | opp_overlap 2347480, overlap 2347472 GCCGGGGTGGAAAAA GTGCAGG TTCT CCCGCGC CGTCAGGCGGGATTT TERM 3068 2347594 - 2347636 + g 75 -6 -4.56775 | opp_overlap 2347586 CAGTACACCTCCCCG CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT napC 2348380 - 2347778 - | cytochrome c-type protein NapC napB 2348839 - 2348390 - | cytochrome c-type protein NapB precursor TERM 3069 2348495 - 2348481 - G 70 -7 -4.09117 | TGCAGGCAGAAATAA CGACGC GGC GCGACG TTGCCCGACACTTTA napH 2349824 - 2348955 - | ferredoxin-type protein NapH TERM 3070 2349700 - 2349687 - G 73 -5.9 -4.43272 | ATGCAAAACCCAAAA GCCCA GCCA CGGGC CGCTGAGAAACATCC TERM 3071 2349755 - 2349776 + g 86 -6.5 -5.00616 | gap 1, opp_overlap 2349729 2349749 2349752, overlap 2349756 GGCGTAACACCAGCC AGC-GGTGGC TAC GCCACCAGCC TTTTTTCGCCCGCGC TERM 3072 2349756 - 2349775 + g 71 -10 -3.60048 | gap 1, opp_overlap 2349749 2349752, overlap 2349755 GCGTAACACCAGCCA GC-GGTGGC TAC GCCACCAGC CTTTTTTCGCCCGCG napG 2350506 - 2349811 - | ferredoxin-type protein NapG TERM 3073 2350372 - 2350394 + g 83 -10.4 -3.92324 | GCCAGGCGGACGCAG CCGCACGCCC GAT GCGCGCGCGG TTTGCTGTTGCAAGC napA 2352999 - 2350513 - | probable nitrate reductase TERM 3074 2351379 - 2351403 + g 71 -7.2 -4.06419 | gap 2, overlap 2351377 GCCAGAACTGCGTGC GGCG-TT-CGGC GTT GCCGTAAGCGCC TTCTTTCTCAACCCA napD 2353259 - 2352996 - | putative napAB assembly protein napF 2353740 - 2353249 - | ferredoxin-type protein NapF eco 2354154 - 2354648 + | ecotin precursor yojI 2356474 - 2354831 - | putative ABC transporter ATP-binding protein TERM 3075 2355097 - 2355107 + g 100 -8.2 -5.49809 | opp_overlap 2355069 CCAGCGCCAGCAGCA GCGC AAT GCGC TTTTTTTGCCCTTTC TERM 3076 2355431 - 2355419 - G 74 -3.3 -4.8622 | overlap 2355421 GCCGCCAATTAAAAA CAGCA GTT CGCCG CGGTGAATCGTCAGG alkB 2357198 - 2356548 - | AlkB protein TERM 3077 2356712 - 2356695 - G 72 -11.3 -3.14931 | GCCATGCTCCAGTAA GATCCGC TGGA GCGGATC GCTGCGACGCAGGCC ada 2358262 - 2357201 - | ADA regulatory protein TERM 3078 2357944 - 2357906 - G 74 -10.3 -3.59979 | GGTGCTCACTTTAAA CAGACGGTGCAGATGAA ACGGG CTCATCGCCACCGCCTG CGCCAGAGACGCCAG TERM 3079 2358128 - 2358104 - G 74 -2.1 -5.00616 | overlap 2358122 CGCGTTGGCAAAAAA GCGAACATT TTTACGT AACGCCCGC TTCGAGCGACAAGAA apbE 2359395 - 2358343 - | thiamine biosynthesis protein TERM 3080 2358928 - 2358912 - G 71 -10.9 -3.28924 | opp_overlap 2358911 2358910 CAGCCCTGTCGATAA CCTGCAA ATG TTGCAGG CCTGTTTTCGCTTTT TERM 3081 2359475 - 2359488 + r 75 -9.5 -3.55815 | opp_overlap 2359475 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT TERM 3082 2359488 - 2359475 - R 100 -9.5 -5.18357 | opp_overlap 2359475 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT ompC 2360646 - 2359510 - | outer membrane protein C TERM 3083 2361046 - 2361064 + H 100 -11 -5.63857 | TTACCCCTATTTCAA CCGGATGC TTC GCATTCGG TTTTTTTACGTTTTT TERM 3084 2361419 - 2361434 + G 71 -4.6 -4.58786 | GATTCTCCCTTCTAC CGGGAA GCAT TACCCG TTTCTTCTTATTGCT TERM 3085 2363070 - 2363089 + G 81 -8.6 -4.35461 | gap 1, opp_overlap 2363059, overlap 2363073 TGAACGCTGGGGCGA TCGCGACGC CCT GCGTCG-GA TTTTGCTGCTGTTGA yojN 2361373 - 2364042 + | putative two-component system sensor kinase TERM 3086 2364518 - 2364480 - g 77 -7.5 -4.36914 | gap 1, overlap 2364483 GTCTGCTGGAGAAAA TCAGCG-CAGGCGGTTAC GGCG ATAAGCGCCTGTCGCCAA AAGAGAGCGAAGTAT rcsB 2364059 - 2364709 + | regulator of capsule synthesis B component TERM 3087 2364779 - 2364807 + T 85 -6.6 -5.24129 | gap 1, overlap 2364780 GACTCATCTTTTGCA GGCCGGACAGGCG ACGC CGCCA-TCCGGCA TTTTTTATGCCCGCG TERM 3088 2364780 - 2364806 + T 79 -10.1 -3.73995 | gap 1, overlap 2364779 ACTCATCTTTTGCAG GCCGGACAGGCG ACGC CGCCA-TCCGGC ATTTTTTATGCCCGC rcsC 2367658 - 2364812 - | sensor protein RcsC TERM 3089 2367759 - 2367742 - R 100 -14.1 -5.29846 | AACGGCAAAGAAAAA GGGCCGG ATAT CCGGCCC TCGCACAGCAATAAC gyrA 2370412 - 2367776 - | DNA gyrase subunit A SEN2255 2372024 - 2370822 - | putative MR-MLE-family protein SEN2256 2373364 - 2372039 - | putative transmembrane transpot protein TERM 3090 2374035 - 2374050 + G 72 -2.6 -4.8667 | TACCTCAAACTGGAT CATGAT TTTC ATTATG TTTTTGTGAAATATG TERM 3091 2374215 - 2374205 - g 76 -3.2 -5.07567 | opp_overlap 2374208 2374211, overlap 2374211 GGATATGTTAAAAAA CAAC AAC GTCG AGGGCGTCTGTAATT TERM 3092 2374288 - 2374266 - g 74 -10.6 -3.48395 | overlap 2374267 2374278 2374279 AGCGGTTTTACAGAA CGCGCAAGAA AAC TTCTTGCGCT GAAAGCGTAATAAAG TERM 3093 2374287 - 2374267 - g 81 -14.1 -2.68823 | overlap 2374266 2374278 2374279 GCGGTTTTACAGAAC GCGCAAGAA AAC TTCTTGCGC TGAAAGCGTAATAAA SEN2257 2373603 - 2374298 + | putative transcriptional regulator ubiG 2374381 - 2375109 + | 3-demethylubiquinone-9 3-methyltransferase TERM 3094 2375132 - 2375158 + F 83 -9.4 -4.21607 | opp_overlap 2375132, overlap 2375123 GAATTTTCCTATAAG GGTTGCGTTAGA TCA TCGGGCGCAACC TTTCTCTTCGATGAA TERM 3095 2375189 - 2375199 + F 100 -4 -6.24157 | GAAATCAGCATTCGA TCAA ATT TTGA TTTTTTTTTATGAAT TERM 3096 2377200 - 2377190 - g 70 -6.8 -4.20084 | ACCACCTATGCAAAA GGCA TTT TGCC GATCGACACCTACAA nrdA 2375465 - 2377750 + | ribonucleoside-diphosphate reductase 1 alpha chain nrdB 2377863 - 2378993 + | ribonucleoside-diphosphate reductase 1 beta chain TERM 3097 2379223 - 2379198 - g 93 -16.3 -2.95298 | TCCAGCCAGGAGAGA TTTTGCCCTGC TGCT GCAGGGCAAAA GGCGATATCGAAATC yfaE 2378993 - 2379247 + | putative ferredoxin SEN2262 2380439 - 2379249 - | putative transmembrane transport protein SEN2263 2380601 - 2381479 + | putative transcriptional regulator TERM 3098 2381580 - 2381528 - T 72 -9 -3.54543 | opp_overlap 2381536 ACTTACGCTGGCAAA CGTTGCGCCAGGCCGGATGAGG CGTTTATGC CCTCATCCGGCGCGTCACTTCG ACTATGGCAAACCTT glpQ 2382665 - 2381595 - | glycerophosphoryl diester phosphodiesterase periplasmic precursor TERM 3099 2382446 - 2382465 + g 100 -13.6 -3.97947 | opp_overlap 2382435 GGTAGTGGTCATGGA GGACGACC AGAT GGTCGTCC TTTGTCATCACTAAA glpT 2384028 - 2382670 - | glycerol-3-phosphate transporter TERM 3100 2382875 - 2382891 + g 77 -3.5 -5.00616 | opp_overlap 2382861 2382871, overlap 2382877 AGACCGGTAAAGCCC GCCGCCG TAC CCGCCGC TTTTTTCGGCGCCAG TERM 3101 2383764 - 2383749 - G 78 -6 -4.82901 | opp_overlap 2383762 CTGCCGGCAGAAAAA CGCGCG GATT CGAGCG ATCGGACACCGAACC TERM 3102 2384322 - 2384308 - g 86 -7.8 -4.70739 | overlap 2384299 GAAAAACAATGAAAA CTCGCG ACT CGCAAG CAAGTGACGTGATTA TERM 3103 2384378 - 2384392 + G 70 -9.2 -3.7456 | opp_overlap 2384356 AGGGATCGCCCGCGA CTGCGC GCT GCGCGG TTTACGTGTCATTCT TERM 3104 2384740 - 2384727 - g 77 -8.1 -4.07687 | ATCGGTGCGGTAAAA GTGCC GGAT GGCAC CGTGGACCCTTTCCG glpA 2384301 - 2385929 + | anaerobic glycerol-3-phosphate dehydrogenase subunit A TERM 3105 2386558 - 2386519 - g 78 -2.1 -5.2204 | gap 1, overlap 2386521 GATAACGAAGAAAAA TGGCCGCTGCTGTACGAC GCGCT GTCGC-CAATAGCGACAA ACTGCGACATGATCA glpB 2385919 - 2387178 + | Anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 2387175 - 2388365 + | anaerobic glycerol-3-phosphate dehydrogenase subunit C TERM 3106 2388373 - 2388393 + F 100 -18.3 -3.07043 | opp_overlap 2388373 TCGGCTAAGTAAAAA GCGCCGGAG CCC CTCCGGCGC TATTACCCTACTCAC TERM 3107 2388393 - 2388373 - f 100 -18.3 -4.8622 | opp_overlap 2388373 TCGGCTAAGTAAAAA GCGCCGGAG CCC CTCCGGCGC TATTACCCTACTCAC TERM 3108 2388698 - 2388683 - f 78 -4.7 -5.00467 | opp_overlap 2388678 2388683, overlap 2388678 TGAATAATAATAAAA TCAGG TCTATG CCTGA TTTAATATATCTCCC SEN2269 2388860 - 2389813 + | hypothetical protein TERM 3109 2389890 - 2389870 - T 93 -15.5 -2.9248 | overlap 2389867 ATAAGTATATAAGGA TGGGAAGGC CAG GCCTTCCCA CTAAAAGTTCTATGC SEN2270 2390076 - 2389900 - | hypothetical protein TERM 3110 2390063 - 2390045 - G 70 -6.7 -4.10657 | CGATAGGCGCTAAAA CGCATGC GTAAG GCATACG TGCCATCCGGCATTT TERM 3111 2390064 - 2390075 + g 83 -5.8 -4.88067 | TGCGTAAGGCATACG TGCC ATCC GGCA TTTTTCTCAATAACT SEN2271 2390885 - 2390082 - | putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 3112 2390267 - 2390245 - G 77 -4 -5.03314 | overlap 2390246 2390247 TCGACCGCCAAAAAA CCCGCCGC TTTTCCG GCAGCGCG AATACGATAAATACA yfaW 2393473 - 2392256 - | putative MR-MLE-family protein yfaX 2394257 - 2393475 - | putative transcriptional regulator SEN2275 2395703 - 2394507 - | hypothetical protein TERM 3113 2394911 - 2394942 + g 74 -7.2 -4.21275 | gap 1, opp_overlap 2394903, overlap 2394936 GACTCAACTGCCTTT CCTGCAGGCGGCGGG CTA TTTGC-GCCGGCAGG TTTTCCGTACCTTCA TERM 3114 2395810 - 2395791 - R 78 -12.8 -2.54344 | overlap 2395790 2395788 GAAAAGGAGGAATAT GGCGCGAC GATT GCCGCGCC GTTAGCATCAAAAGC TERM 3115 2395841 - 2395824 - R 83 -9.1 -4.30576 | opp_overlap 2395810 CCGTTAGCATCAAAA GCTGGCG TTTA CGCCAAC ATAAGGGCCGTCAGC yfaZ 2396465 - 2395818 - | hypothetical protein TERM 3116 2396559 - 2396549 - H 91 -6.8 -5.52023 | opp_overlap 2396549 AGGATTAACAAAAAA CGCA GTC TGCG TTATCGCTTCCATTT yfaO 2396639 - 2397064 + | hypothetical protein TERM 3117 2397069 - 2397088 + T 76 -9.3 -3.76413 | opp_overlap 2397068 2397065 GGTTATTATAATGAC GACAGCC GCTTCA GGCTGTC TTTACGCTTTTAACA ais 2397714 - 2397109 - | Ais protein TERM 3118 2397784 - 2397772 - H 76 -7.7 -4.27965 | overlap 2397767 ACAATTAAAATGAAA TTCCG CGA CGGAA GACCAGGCCAGAAAC TERM 3119 2398523 - 2398505 - g 83 -10.2 -3.95153 | opp_overlap 2398515 2398521, overlap 2398497 GGAACCAGCTACAAA GGTCGCCA CAT TGGCGCCC GGGGCACCGCGATTT yfbE 2397995 - 2399152 + | putative lipopolysaccharide biosynthesis protein pmrF 2399155 - 2400138 + | putative lipopolysaccharide modification protein yfbG 2400135 - 2402117 + | putative lipopolysaccharide modification protein TERM 3120 2402384 - 2402368 - g 76 -2.9 -5.00616 | overlap 2402370 2402371 CTGGCCGGGAAAAAA TATCGGC AAC GCCAATG CCGGGATTATTCGTG SEN2282 2402114 - 2403013 + | hypothetical protein TERM 3121 2403206 - 2403196 - g 71 -4.6 -4.59773 | CGTTATTTTGAAAAA CCGA TAG CCGG TTACTGGATAAACAG pqaB 2403010 - 2404656 + | melittin resistance protein PqaB SEN2284 2404653 - 2404988 + | hypothetical protein SEN2285 2404988 - 2405365 + | hypothetical protein pmrD 2405617 - 2405360 - | polymyxin B resistance protein menE 2407082 - 2405715 - | O-succinylbenzoic acid-CoA ligase menC 2408041 - 2407079 - | O-succinylbenzoate synthase TERM 3122 2407460 - 2407439 - G 77 -11.5 -3.57144 | opp_overlap 2407431 2407441 GGTTTCACGGGCAAA GGCGCGGGA ATCA TCCCGCGTC TTACACGGTTCTTCG TERM 3123 2407441 - 2407458 + g 81 -12.7 -3.05066 | opp_overlap 2407439, overlap 2407431 TTTCACGGGCAAAGG CGCGGGA ATCA TCCCGCG TCTTACACGGTTCTT menB 2408898 - 2408041 - | naphthoate synthase yfbB 2409671 - 2408913 - | hypothetical protein TERM 3124 2409353 - 2409371 + g 76 -11.7 -3.08679 | opp_overlap 2409353 GACCGCCTTCAACCA CCAGGCC GCACA GGCCTGG TATTCCCTGGCAGGC TERM 3125 2409371 - 2409353 - G 72 -11.7 -2.71144 | opp_overlap 2409353 GACCGCCTTCAACCA CCAGGCC GCACA GGCCTGG TATTCCCTGGCAGGC menD 2411338 - 2409668 - | menaquinone biosynthesis protein TERM 3126 2410658 - 2410678 + g 90 -8.1 -4.82901 | overlap 2410660 TTCCGCGCTCATACG CCCGGCGAC AAC GACGCCGCG TTTTTGTCGCCAGAA menF 2412719 - 2411424 - | isochorismate synthase TERM 3127 2411688 - 2411662 - G 71 -5.8 -4.30995 | gap 1 TGTTCTATAAAACAA CGCGCGGGTTC ACGAGG GATCCCG-GCG ACCGCTGCGGTAGGC TERM 3128 2411861 - 2411880 + g 74 -2.1 -5.00846 | opp_overlap 2411861 AGATGTCTTCGACAA CCAGC ATATTTTCTC GCTGG TTTTTATCGTCTTTC TERM 3129 2412757 - 2412741 - R 78 -6.5 -4.56597 | opp_overlap 2412753 2412754 2412756, overlap 2412742 2412753 CCTCCCTGTTAAAAA CCCCACA TTA TACGGGG TACTGCCCTAAAAAA elaB 2413131 - 2412820 - | hypothetical protein TERM 3130 2412878 - 2412888 + g 81 -6.8 -4.72986 | opp_overlap 2412878 GCGCCTACGCCAATA CCCT GCC AGGG TTTTTCATGAACGTA elaA 2413641 - 2413180 - | hypothetical protein elaC 2413702 - 2414619 + | Ribonuclease Z SEN2296 2414685 - 2415686 + | putative receptor/regulator protein TERM 3131 2415688 - 2415726 + T 77 -11 -3.14132 | opp_overlap 2415692 2415694 GCAAAAGCGCCTGAC GTAACAGGGGATGCCT ACAGTAC AGGCATCCCCTGACGC TTAGTGAGACAAGCC TERM 3132 2415722 - 2415692 - T 100 -18.4 -3.05715 | opp_overlap 2415688, overlap 2415694 AAGCGCCTGACGTAA CAGGGGATGCCTAC AGT ACAGGCATCCCCTG ACGCTTAGTGAGACA TERM 3133 2415720 - 2415694 - T 93 -15.2 -3.08679 | opp_overlap 2415688, overlap 2415692 GCGCCTGACGTAACA GGGGATGCCTAC AGT ACAGGCATCCCC TGACGCTTAGTGAGA yfbK 2417517 - 2415727 - | lipoprotein TERM 3134 2416408 - 2416440 + g 86 -3.6 -5.40072 | overlap 2416410 GTCATCGCCGACGCC CAGCGT-AGATAAGGT AAT ACCTT-TCTCACGCTC TTTTTTTACCAGCGC TERM 3135 2416410 - 2416438 + g 71 -6.2 -4.34482 | overlap 2416408 CATCGCCGACGCCCA GCGT-AGATAAGGT AAT ACCTT-TCTCACGC TCTTTTTTTACCAGC TERM 3136 2418330 - 2418314 - R 73 -9.5 -3.29829 | opp_overlap 2418313 2418314, overlap 2418325 CACAGGTTTTCATAA GTTGGAT GCA ATCCAAC ATTTAGAGGCTCAGG TERM 3137 2418365 - 2418382 + r 93 -12.7 -3.66018 | GCTCATCAGCCTCAA CCGCCGA TAAA TCGGCGG TTATTGACATCATCA nuoN 2419863 - 2418406 - | NADH dehydrogenase I chain N TERM 3138 2419627 - 2419597 - G 95 -15.4 -3.65351 | CCACGGGTAGGCAAA GGTGCAGGTGGCGA GGC TCGCCAGCAGCACC AGCCCGGTGTAGAGC nuoM 2421399 - 2419870 - | NADH dehydrogenase I chain M TERM 3139 2421191 - 2421179 - G 70 -6.9 -4.18802 | ATAGAGATGCCAAAA CGCGG GAT CCACG GCAGAACAAATTCAG nuoL 2423554 - 2421713 - | NADH dehydrogenase I chain L TERM 3140 2422832 - 2422802 - G 76 -11.7 -3.14132 | CGCGGCGTGGATCAA CGCGGAGACCGGC GTCGG GCCGGCCATCGCG TCGGCAAGCCAGGTC nuoK 2423853 - 2423551 - | NADH dehydrogenase I chain k nuoJ 2424404 - 2423850 - | NADH dehydrogenase I chain J nuoI 2424957 - 2424415 - | NADH dehydrogenase I chain I nuoH 2425949 - 2424972 - | NADH dehydrogenase I chain H TERM 3141 2425801 - 2425762 - G 76 -12.8 -2.79679 | gap 1, opp_overlap 2425763 AACATCTTGATCATA TCCGCGACCAGCTGGAGCG AGC CGCCCCAGCCAA-CGCGGT TTGGTCCATAACGGT nuoG 2428672 - 2425946 - | NADH dehydrogenase I chain G TERM 3142 2427171 - 2427187 + g 74 -2.1 -5.00616 | CTACCGGCGTTAGTG CCGGAGA TAA TCAGCGG TTTTTTCGCGCCGGC TERM 3143 2428494 - 2428508 + g 70 -5.6 -4.46404 | ATCACCAGGCGACCA CGCGTA TCT TCCGCG TTTTGGTATTGCTTC nuoF 2430040 - 2428703 - | NADH dehydrogenase I chain F nuoE 2430537 - 2430037 - | NADH dehydrogenase I chain E nuoC 2432342 - 2430540 - | NADH dehydrogenase I chain C; chain D TERM 3144 2432062 - 2432051 - G 73 -5.8 -4.37886 | overlap 2432059 2432060 TCAGGTGGTAGAAAA CGGA AAAA TCCG CGGCGGGTAACCCGT TERM 3145 2432083 - 2432059 - G 100 -9.1 -4.89729 | overlap 2432051 2432060 TAGAAAACGGAAAAA TCCGCGGCGGG TAA CCCGTCACGGT GCGTACGCAGGCGTT TERM 3146 2432082 - 2432060 - G 85 -12.6 -3.5221 | overlap 2432051 2432059 AGAAAACGGAAAAAT CCGCGGCGGG TAA CCCGTCACGG TGCGTACGCAGGCGT nuoB 2433091 - 2432429 - | NADH dehydrogenase I chain B TERM 3147 2433005 - 2433028 + g 95 -11 -4.57073 | overlap 2432995 GTTAACTTCCTGCTC CAGGGGGTCG GTTA CGATCTCCTG TTTTTGCAGGGGGTA nuoA 2433550 - 2433107 - | NADH dehydrogenase I chain A TERM 3148 2433252 - 2433238 - G 89 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCAACCCAGCCGC TERM 3149 2433655 - 2433637 - R 95 -2.4 -6.13503 | overlap 2433638 2433639 GAGGAATAAAAAAAA CCCTACAA TTA CTGTAGAA AATGATAAAAACAGC SEN2311 2434097 - 2433945 - | hypothetical protein TERM 3150 2434138 - 2434105 - R 100 -9.6 -5.61596 | gap 1, opp_overlap 2434105 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG TERM 3151 2434105 - 2434138 + r 91 -7.4 -5.22039 | gap 1, opp_overlap 2434105 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG lrhA 2435115 - 2434177 - | NADH dehydrogenase operon transcriptional regulator TERM 3152 2435036 - 2435013 - G 71 -11.6 -2.96395 | opp_overlap 2435013 ACTGAGTACGACATA CCGCCGCCGC CGCC GCGGCGAAGG TGTTCAGATCGGCAA yfbQ 2436047 - 2437261 + | putative aminotransferase TERM 3153 2437292 - 2437269 - f 100 -14 -3.72453 | opp_overlap 2437269, overlap 2437262 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCAC TERM 3154 2437269 - 2437292 + F 86 -14 -3.20348 | opp_overlap 2437262 2437269 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCAC TERM 3155 2437671 - 2437650 - g 80 -4.3 -5.10497 | opp_overlap 2437654, overlap 2437637 AAGCGATCGAAAAAA TCGCCCAGC AAAA GCTGGTTGA TATGGCGCCGGATGA SEN2314 2437355 - 2437954 + | putative oxetanocin A biosynthetic enzyme TERM 3156 2438017 - 2438044 + T 93 -10.6 -4.39166 | gap 1 AGCGTGATATCCGTA GGCCTGATAAGCG TAG CGCC-ATCAGGCC TTTTCCTGTCTGGGG yfbS 2439886 - 2438060 - | putative sodium/sulphate transporter TERM 3157 2438225 - 2438210 - G 86 -11.8 -3.86194 | overlap 2438197 AACCGGCGTCATAAA GGCGGC GGAT GCCGCC ATCGCCACCGCCATC TERM 3158 2438801 - 2438815 + g 77 -11.4 -3.53091 | CAGCGACCCTTCCAG CGCGAC GCC GTCGCG TTTCAGGCCGACCAT TERM 3159 2439273 - 2439283 + g 77 -8.2 -4.13767 | CCGGCCTGTTGTCCG GGCG CAT CGCC TTTTAGCATGAAGCG TERM 3160 2439956 - 2439932 - R 84 -10.8 -3.86346 | gap 1, opp_overlap 2439933, overlap 2439935 CGATTCTGCCATAAA TAT-GCCCCGC CAAA GCGGGGCGATA TCATGATCACGTCTT TERM 3161 2439952 - 2439935 - R 83 -14.1 -2.70946 | opp_overlap 2439933, overlap 2439932 TTCTGCCATAAATAT GCCCCGC CAAA GCGGGGC GATATCATGATCACG yfbT 2440640 - 2439963 - | putative phosphatase yfbU 2441127 - 2440633 - | hypothetical protein TERM 3162 2441184 - 2441165 - R 100 -10.8 -5.52384 | opp_overlap 2441165 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT TERM 3163 2441165 - 2441184 + r 93 -10.8 -4.55689 | opp_overlap 2441165 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT SEN2318 2441665 - 2441210 - | hypothetical protein TERM 3164 2441531 - 2441552 + g 80 -8.7 -4.07568 | opp_overlap 2441519 2441545, overlap 2441532 AAATCGTATGGCATA GCGCGTCAT ACGA ATGACGCGG TTTTCGACGAAAACG TERM 3165 2441532 - 2441551 + g 76 -12.2 -3.04398 | opp_overlap 2441519 2441545, overlap 2441531 AATCGTATGGCATAG CGCGTCAT ACGA ATGACGCG GTTTTCGACGAAAAC TERM 3166 2442834 - 2442810 - g 70 -2.7 -4.76075 | overlap 2442801 2442811 ATCAGATCAACAAAA TGCTGACCAAA GAG TCCGGTCTGCT GGGTCTGACTGAAGT ackA 2442005 - 2443207 + | Acetate kinase TERM 3167 2443211 - 2443238 + F 100 -16.4 -4.37886 | gap 1, overlap 2443213 CTGACTGCCTGATTT CA-CACCGCCAGC CTC GCTGGCGGTGCTG TTTTGTAACCCGTCC TERM 3168 2443213 - 2443235 + F 100 -19.2 -2.8733 | overlap 2443211 GACTGCCTGATTTCA CACCGCCAGC CTC GCTGGCGGTG CTGTTTTGTAACCCG pta 2443284 - 2445428 + | phosphate acetyltransferase TERM 3169 2446208 - 2446175 - g 79 -13.3 -2.70932 | gap 1, overlap 2446180 TCGCCTTTGCAATTA TCATAGCCCCGC-TGA TGG TCAGGCTGGGCTATGA CAGCATTACCACCGT TERM 3170 2446711 - 2446727 + G 77 -7.2 -4.25283 | AGGATGATGATCGCG CCCGCC TTGCT GGTGGG TTTTGCTAAAGGCAT yfcC 2445646 - 2447166 + | hypothetical protein TERM 3171 2447202 - 2447174 - T 95 -11.8 -4.30416 | gap 1, opp_overlap 2447173 ATCATTAATCCAAAA TGCCGGATGAGCA TCAG CGC-CATCCGGCA ATATCTCCATGATTA SEN2322 2448168 - 2447215 - | putative transketolase C-terminal section TERM 3172 2447407 - 2447423 + g 84 -5.7 -5.03715 | overlap 2447420 GCTGTGGTTTTCACA CGTGACG ATA CGCCGCG TTTTTTCCGCGTAGT TERM 3173 2447899 - 2447888 - G 71 -5.8 -4.28018 | overlap 2447877 AAGAGCTGATCAAAA CAGC GACG GCTG GCAAAAGCGGTAAAG SEN2323 2448991 - 2448161 - | putative transketolase N-terminal section TERM 3174 2448353 - 2448367 + g 71 -10 -3.57144 | opp_overlap 2448340, overlap 2448340 CACCGCCAGTAGTCC GGCGAT ATC ATCGCC TTTGACGGTGACGAC TERM 3175 2448646 - 2448672 + g 73 -5.1 -4.58395 | overlap 2448647 2448653 TGCCCTGTCCCAGTG AGC-CGGTCGTGG CGT CCACG-CCGCGCG TTTTTAGCCGATCCG SEN2324 2450379 - 2448988 - | hypothetical protein SEN2325 2450672 - 2450400 - | putative sugar phosphotransferase component II B TERM 3176 2450554 - 2450528 - G 72 -2.3 -4.91109 | gap 2, overlap 2450530 TGGCCATTACAAAAA GATCGG-CA-GCC CCG GGCGTGGCCGATG AAAGATCGGAGTGTT SEN2326 2451196 - 2450753 - | putative sugar phosphotransferase component II A TERM 3177 2452443 - 2452414 - g 74 -10.1 -3.74224 | gap 1, opp_overlap 2452414 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCCATCGCCTCCAG TTTATGTATGCGGGA TERM 3178 2452414 - 2452443 + G 83 -10.1 -4.12532 | gap 1, opp_overlap 2452414 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCCATCGCCTCCAG TTTATGTATGCGGGA SEN2327 2451449 - 2452468 + | putative transcriptional regulator SEN2328 2453028 - 2452474 - | hypothetical protein TERM 3179 2452499 - 2452513 + g 71 -4.2 -4.66833 | overlap 2452500 TCTTCCGGTTTCTCC TGGAGC GCG GCTTCG TTTTTGGCGTTGCGG yfcE 2453636 - 2453085 - | hypothetical protein yfcF 2454336 - 2453692 - | putative glutathione-S transferase TERM 3180 2454029 - 2454042 + g 100 -9.5 -4.88736 | CACGCCTGAATCTGT CGCGC GCGG GCGCG TTTTTGTAAATCGTG TERM 3181 2454311 - 2454298 - G 74 -2.3 -4.99035 | GTAGGGAGAGAAAAA GTTCG CATC CGACC ACAGCACAATAACAG yfcG 2454479 - 2455126 + | putative glutathione-S transferase TERM 3182 2455186 - 2455176 - f 73 -2.4 -5.14477 | TATACACGGAAAAAA CCTG CGT CCGG CACCCTTATTCGTAT TERM 3183 2455957 - 2455987 + G 83 -12.4 -3.68222 | overlap 2455958 GAGCAGTTTGCTCAT GCGCTGGGTCGCGC GCT GCGCCGCCCGGCGA TTATTCGCATTCCGG TERM 3184 2455958 - 2455986 + G 86 -15.9 -2.80612 | overlap 2455957 AGCAGTTTGCTCATG CGCTGGGTCGCGC GCT GCGCCGCCCGGCG ATTATTCGCATTCCG TERM 3185 2456086 - 2456074 - g 80 -9.1 -4.07568 | CGGGCGCTGCCAAAA CGGCT TGA AGCCG CCGGATTCGCATTTC yfcH 2455252 - 2456145 + | hypothetical protein TERM 3186 2456166 - 2456191 + T 86 -8.9 -4.54026 | gap 1 AAAGCGCCGTATCCT GCCCGGT-ACGC AAT GCGCCGCCGGGC TTCTTTTATTTCAGC hisP 2456973 - 2456197 - | histidine transport ATP-binding protein hisM 2457691 - 2456984 - | histidine transport system permease hisQ 2458374 - 2457688 - | histidine transport system permease protein hisJ 2459339 - 2458557 - | histidine-binding periplasmic protein TERM 3187 2459446 - 2459407 - R 71 -10 -3.14564 | opp_overlap 2459408 2459410, overlap 2459410 2459419 CTATCGTGCCATTAA TCAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGGT TTATTTTGCATAAAA TERM 3188 2459408 - 2459445 + r 80 -6.9 -4.68908 | opp_overlap 2459407 2459410 2459419, overlap 2459410 TATCGTGCCATTAAT CAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGG TTTATTTTGCATAAA TERM 3189 2459443 - 2459410 - R 87 -14.7 -2.77899 | opp_overlap 2459408 2459410, overlap 2459407 2459419 TCGTGCCATTAATCA GGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCC GGTTTATTTTGCATA TERM 3190 2459539 - 2459516 - R 100 -10.4 -4.7497 | opp_overlap 2459501 2459535 CTTATGCACCAAAAA GGTGCAAAAC ATCT ATTTTGCACC GTGATAGTTCCCCAG argT 2460359 - 2459577 - | lysine-arginine-ornithine-binding periplasmic protein precursor TERM 3191 2460252 - 2460219 - G 81 -8.1 -4.29929 | opp_overlap 2460221 ATCAAAGCCAATAAA CTCGCCTTTGGCATC TTTT GATGAGAAAGGCGCG TAGGTGGTATCTGTT TERM 3192 2460615 - 2460597 - R 95 -13.2 -4.37092 | ATCGCGGTTACAAAA TTGCCCTG AAA CAGGGCAA CAGGGACAATAATGC ubiX 2461217 - 2460648 - | putative decarboxylase TERM 3193 2460777 - 2460766 - G 91 -7.2 -4.98436 | GGAAGATGATAAAAA GCCG GAAC CGGC GGCATAATCACCGCG SEN2339 2462650 - 2461244 - | putative amino acid permease TERM 3194 2461923 - 2461897 - G 77 -3.7 -5.07652 | opp_overlap 2461909, overlap 2461892 GGCCGTAAAACAAAA TGATTCTGAGA CCGAT CCCCAGGATCA CTTTCGGTAAAATAA TERM 3195 2462708 - 2462682 - R 79 -11.4 -3.38046 | opp_overlap 2462684, overlap 2462680 2462683 2462697 TCGTGAGGTCAAAGA TGCCGCCGCGAC ATA GCCGCGGCGGTT ATGCGTTAACGCGTA TERM 3196 2462707 - 2462683 - R 86 -14.9 -2.62613 | opp_overlap 2462684, overlap 2462682 2462680 2462697 CGTGAGGTCAAAGAT GCCGCCGCGAC ATA GCCGCGGCGGT TATGCGTTAACGCGT TERM 3197 2462684 - 2462706 + r 100 -16.2 -3.41878 | opp_overlap 2462683 2462682 2462680 2462697 GTGAGGTCAAAGATG CCGCCGCGAC ATA GCCGCGGCGG TTATGCGTTAACGCG SEN2340 2463817 - 2462714 - | hypothetical protein TERM 3198 2462836 - 2462853 + g 74 -8.4 -3.9712 | AATCCTCAATATCCA CCAGCG TATGAT CGCTGG TTTGTCCTAAGATAG TERM 3199 2463000 - 2463016 + g 71 -7.9 -3.94853 | overlap 2463005 2463010 TCGACGCCCAGCTCC CCGACCG GGA CGGTAGG TTTACTGTTCAGTTC TERM 3200 2463274 - 2463232 - G 80 -10.5 -3.85817 | gap 1, overlap 2463250 AGTTTCCCGCAGAAA GCCGCCGGACAGGAATACCG CTGT CAGC-TTCCAGCCGGGCGGC CAGCGCCAGAAAATC SEN2341 2465240 - 2463819 - | putative amino acid transporter SEN2342 2466728 - 2465331 - | putative amino acid decarboxylase TERM 3201 2467853 - 2467842 - g 71 -7.2 -3.99494 | opp_overlap 2467841, overlap 2467836 TTAATTCAACAAGAA CGCC TGCG GGCG GATCTTTTTTATCGG SEN2343 2466939 - 2468366 + | putative transcriptional regulator purF 2469919 - 2468402 - | amidophosphoribosyltransferase cvpA 2470445 - 2469957 - | colicin V production protein (DedE protein) TERM 3202 2470573 - 2470548 - R 100 -9.8 -5.27938 | ACGCGTAAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCACACTTTTTATCT dedD 2471430 - 2470756 - | DedD protein folC 2472688 - 2471420 - | folylpolyglutamate synthase TERM 3203 2472664 - 2472640 - G 70 -5.5 -4.38927 | TTTCCAGATAAGAAA GCCACGAGGCC AGG GGCGACGCAGC TTGAGGTATAGATTT TERM 3204 2472750 - 2472718 - R 100 -17.1 -3.06515 | opp_overlap 2472723, overlap 2472723 CTTTACGGTGAAAAG CAAAAGGGCAGAGCC TGC GGCCCTGCCCTTTTC AGTTATCAGGCCTCA TERM 3205 2472745 - 2472723 - R 100 -17 -4.67038 | opp_overlap 2472723, overlap 2472718 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG TERM 3206 2472723 - 2472745 + r 100 -14.8 -4.3208 | opp_overlap 2472723 2472718 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG accD 2473670 - 2472756 - | acetyl-CoA carboxylase beta subunit TERM 3207 2473808 - 2473796 - R 77 -3.3 -5.24531 | opp_overlap 2473796 ACTTTGGATAAAAAA GTGGT CGA ACCGC TGAGTTACTTTCTAT dedA 2474479 - 2473820 - | DedA protein (dsg-1 protein) truA 2475340 - 2474528 - | tRNA pseudouridine synthase A usg 2476353 - 2475340 - | putative semialdehyde dehydrogenase TERM 3208 2476408 - 2476379 - R 86 -11.5 -3.80279 | gap 1, opp_overlap 2476379, overlap 2476372 TCCAGAAATACATAA GCGTCCCTGTCGCA TTA TTCGACAGGGA-GC ATTAAGAAGACATTA pdxB 2477557 - 2476421 - | Erythronate-4-phosphate dehydrogenase TERM 3209 2477878 - 2477855 - g 90 -5.9 -5.24129 | overlap 2477859 TCTGGGGATAAAAAA TGACGCGCC GCTACT GTCGCGCCA CTTCCCCGCCGCTGA TERM 3210 2478621 - 2478642 + G 70 -5.1 -4.45517 | GGCCTGTTGTTTATC GCGCTAATA ATTG TACTGGCGC TTTTCTGGCTGGTTT flk 2477661 - 2478662 + | Div protein SEN2354 2479834 - 2478659 - | putative transmembrane transporter TERM 3211 2478829 - 2478850 + g 95 -14.5 -3.54424 | CGCCGAGCGCCGTAC CGCGTACCT GTGC AGGTACGCG TTTCACAACCTCCAC TERM 3212 2479367 - 2479331 - G 71 -10.7 -3.22298 | GCTATGGATCAGCAA GCCCAACGGCGCACCGG CCG CCAGCGCGCCGTAAATC GCCATCCCGTTCCAC SEN2355 2480388 - 2480014 - | putative bacteriophage protein TERM 3213 2480412 - 2480427 + H 70 -4.8 -4.40561 | overlap 2480409 TTCCTTTCCCCTGAT GAAATA AAAA TATTTC TTCTTTTTCGCGAAA TERM 3214 2480493 - 2480481 - H 78 -6.3 -4.70659 | opp_overlap 2480481 2480470 TCTCAGAGTGAAAAA GAAAG TAA CTTTC TTTTTCTCGCGCTAA TERM 3215 2480481 - 2480493 + H 80 -6.3 -4.84359 | opp_overlap 2480481, overlap 2480470 TCTCAGAGTGAAAAA GAAAG TAA CTTTC TTTTTCTCGCGCTAA TERM 3216 2480537 - 2480524 - H 72 -5.3 -4.62069 | TTTTTACCTTAAAAA TATCG GTGC CGATA ACACATCTTCTTAGG TERM 3217 2480585 - 2480574 - g 83 -5.8 -4.90013 | GAATGGAACCAAAAA GCCA AGAC TGGC ATCGTGCAGATATTA SEN2356 2480561 - 2480809 + | putative DNA-binding protein SEN2357 2480978 - 2481346 + | hypothetical protein TERM 3218 2481708 - 2481670 - g 76 -5.3 -4.82901 | gap 1, opp_overlap 2481702, overlap 2481646 CTCGGCGGAGAAAAA GTGGATGTTCTGTTGGCT ACAG AGTCAAC-GCCCATCCAC CTGGAAGTTTATACC SEN2358 2481346 - 2481864 + | putative lipoprotein SEN2359 2482587 - 2481931 - | hypothetical protein TERM 3219 2482650 - 2482631 - R 100 -13.6 -5.26875 | opp_overlap 2482631 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTATTGATAC TERM 3220 2482631 - 2482650 + r 100 -13.6 -4.09805 | opp_overlap 2482631 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTATTGATAC fabB 2483899 - 2482685 - | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 3221 2484163 - 2484179 + G 74 -2.1 -5.06414 | TAATGACAATGGACT CGAAGAG ACA CGCTACG TTTTTCTTGGCGGCA TERM 3222 2485867 - 2485851 - g 72 -3.5 -4.78237 | opp_overlap 2485858 TAGCCGATAACAAAA CGTCGGC GGC GCCTGCG CCTGTGTATCCGGGT SEN2361 2483999 - 2486059 + | hypothetical protein TERM 3223 2486101 - 2486074 - T 75 -11.2 -3.08798 | opp_overlap 2486067 2486100 ATGGGTCAGTCAATA GCGGAAGGCGGC AAGC GTCGCCTTCCGG CCCACGGCGTTATTG yfcL 2486386 - 2486111 - | hypothetical protein yfcM 2486967 - 2486419 - | hypothetical protein yfcA 2487776 - 2486967 - | hypothetical protein TERM 3224 2487291 - 2487267 - G 80 -9.9 -3.94381 | overlap 2487282 2487283 2487285 ACATAAGGTGACAAA CGCCAGAGCGT AAA ACGACCCGGCG GCAGGCCCGAAAAAG mepA 2488600 - 2487776 - | penicillin-insensitive murein endopeptidase precursor TERM 3225 2488577 - 2488590 + g 100 -3.7 -5.77856 | GACAAACCATGCCAG CAGCG CAAT CGCGG TTTTTTTCATTTCTT aroC 2489689 - 2488604 - | Chorismate synthase yfcB 2490657 - 2489725 - | hypothetical protein TERM 3226 2490850 - 2490836 - g 95 -5.6 -5.34655 | overlap 2490838 GAATGAAAAAGAAAA CATCGC TCA GCGAGG AGGACCAGGCGCTGT TERM 3227 2490848 - 2490838 - g 74 -6.8 -4.26857 | overlap 2490836 ATGAAAAAGAAAACA TCGC TCA GCGA GGAGGACCAGGCGCT yfcN 2490823 - 2491374 + | hypothetical protein sixA 2491959 - 2491474 - | phosphohistidine phosphatase yfcX 2494315 - 2492168 - | putative fatty acid oxidation complex alpha subunit TERM 3228 2492518 - 2492530 + g 93 -4.8 -5.46698 | opp_overlap 2492518 TAAGCTTATAAATAG CAGG GTCAA CCTG TTTTTTGCTTTTACG TERM 3229 2492864 - 2492878 + g 91 -7.8 -5.01732 | ATCACTGACGACTAT CGGGGT TTT ACCCTG TTTTTTCGCCAGCTT TERM 3230 2493396 - 2493424 + g 80 -4.3 -5.05782 | overlap 2493399 CCCACGCTGTTCAGC GGGCCGGGCGGCG CAT CGCTACCGGGATC TTTTTTCACCTCGGT TERM 3231 2493469 - 2493454 - G 80 -5.4 -4.87803 | gap 1, overlap 2493456 TACTGGCAAAGAAAA CAG-CGC GCA GCGCCTG CGATTGAGGCGTCAT TERM 3232 2493466 - 2493456 - G 74 -8.2 -4.05678 | overlap 2493454 CTGGCAAAGAAAACA GCGC GCA GCGC CTGCGATTGAGGCGT TERM 3233 2493578 - 2493597 + g 76 -3.4 -5.08169 | overlap 2493573 2493595 AATGATCCGCTCCGT CGCCGGAT AATT ACCCTGCG TTTTTTGCGCTGTCT yfcY 2495625 - 2494315 - | putative 3-ketoacyl-CoA thiolase TERM 3234 2494795 - 2494782 - G 76 -9.5 -3.84406 | opp_overlap 2494791 CGGTCATCATAATAA CGGCG GCAG CGCCG TCGGTCAGCGGTGTA TERM 3235 2495792 - 2495756 - R 100 -9.4 -5.75599 | overlap 2495761 GAAACGACAAAAAAA GAAAACGCCTCCGCCA GATGA TGACGGAGGCGTCGTG AATGAACGGATTAAC TERM 3236 2495787 - 2495761 - R 100 -15.9 -5.61277 | overlap 2495756 GACAAAAAAAGAAAA CGCCTCCGCCA GATGA TGACGGAGGCG TCGTGAATGAACGGA yfcZ 2496087 - 2495803 - | hypothetical protein TERM 3237 2496986 - 2497002 + G 70 -6.5 -4.0896 | GATGCGGTATACGCG CGTGCGA AAA TCGAACG TTTTGCGGGCGATTT TERM 3238 2497058 - 2497043 - g 72 -11.8 -2.68823 | overlap 2497042 GTCGCGGCACAGAAT CCGGCG CTGG CGCCGG TCGCGGGTCAGATTC fadL 2496452 - 2497765 + | long-chain fatty acid transport protein precursor TERM 3239 2497784 - 2497814 + T 86 -11.3 -3.78351 | opp_overlap 2497790, overlap 2497790 CTTTCTGAAACGGAT CAAAAAGGTGAGC ATTGC GCTCACCTTTTTA TTTACTGCCGTTTAT TERM 3240 2497790 - 2497808 + T 100 -10.3 -5.33405 | opp_overlap 2497790, overlap 2497784 GAAACGGATCAAAAA GGTGAGC ATTGC GCTCACC TTTTTATTTACTGCC TERM 3241 2497808 - 2497790 - T 100 -11 -4.78764 | opp_overlap 2497790 2497784 GAAACGGATCAAAAA GGTGAGCA TTG CGCTCACC TTTTTATTTACTGCC vacJ 2498581 - 2497826 - | VacJ lipoprotein precursor TERM 3242 2497855 - 2497877 + g 71 -6.3 -4.2679 | gap 1 TCTCTTTGAGTTCGT CCTGAATCGC CTGC GCG-TTCGGG TTTTCCTGCGGCTTG yfdC 2498870 - 2499811 + | hypothetical protein TERM 3243 2499879 - 2499867 - f 81 -3.3 -5.4505 | CCGGCGAATAAAAAA CGCTA TAC TGGCG CCGCGTTGTCCCCTT TERM 3244 2500723 - 2500742 + F 95 -2.8 -5.8901 | TTGTCGAAATCGAAG GGATGGGA CATG TGCCATTC TTTTTTATTTTATGT TERM 3245 2500872 - 2500839 - f 89 -5.4 -5.75342 | CTCCCTGAAAAAAAA TGCAAAGCCTTGTA AGACGA TGCAAAGCTTTACA TGTCCCGTTTTTATT TERM 3246 2500917 - 2500937 + F 75 -11.3 -3.07895 | opp_overlap 2500917 AATCAGCAATACCAA TTGATCGAT AAC ATCGATCAA TATATTAAAACTCAA TERM 3247 2500937 - 2500917 - f 79 -11.3 -3.40565 | opp_overlap 2500917 AATCAGCAATACCAA TTGATCGAT AAC ATCGATCAA TATATTAAAACTCAA TERM 3248 2500970 - 2500948 - f 70 -5 -4.43815 | overlap 2500940 2500942 2500949 2500964 ATCAATATATTAAAA CTCAATAGTT TAA AACTATTAAA AATACAATTATTGAT gtrA 2501054 - 2501443 + | bactoprenol-linked glucose transferase TERM 3249 2503266 - 2503256 - g 71 -4.6 -4.61284 | opp_overlap 2503264 ATAAAAAAAATTAAA GAGG CAT CCCC TGACTCAAGGATTAT gtrC 2501684 - 2503606 + | putative lipopolysaccharide modification acyltransferase TERM 3250 2503703 - 2503680 - T 81 -12.4 -3.29471 | CTGCCACTATATTAA CGGTGATCGC TCAG GCGGTCACCG AACTCGATAATAAAG TERM 3251 2505097 - 2505066 - T 84 -8.7 -4.72986 | overlap 2505068 TACGTTCAGCAAAAA GTCGTCATCGGCC GGTTAT GACCGATGACATC CTGATGTGGTCTAGA pgtE 2506046 - 2505108 - | outer membrane protease E pgtA 2507561 - 2506314 - | phosphoglycerate transport system transcriptional regulatory protein PgtA TERM 3252 2507230 - 2507243 + g 73 -5.2 -4.57073 | AATATCAACAGCTTG CCCG GATCGA CGGG TTTTTGCAGAAAATC pgtB 2509557 - 2507551 - | phosphoglycerate transport system sensor protein PgtB TERM 3253 2508644 - 2508675 + g 78 -6.5 -4.56597 | gap 1, opp_overlap 2508631 AAGCGCCCTAGCGTA GCCTCTCTGG-CGC GGCTG GCGTCCAGTAAGGC TTTTTGCGCCGCAAC pgtC 2510747 - 2509554 - | phosphoglycerate transport regulatory protein PgtC precursor TERM 3254 2511687 - 2511709 + G 74 -7.6 -4.1964 | overlap 2511678 GTTGGCGGCGGGATC GTCGCGCCTA TCG TCGGTGCGGC TTTTGCGATATTGGG pgtP 2511183 - 2512574 + | phosphoglycerate transporter protein TERM 3255 2512619 - 2512601 - T 100 -16 -3.65812 | opp_overlap 2512601 TCCCGGGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCGCTGAC TERM 3256 2512601 - 2512619 + T 93 -16 -3.11072 | opp_overlap 2512601 TCCCGGGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCGCTGAC SEN2386 2513091 - 2512849 - | hypothetical protein ddg 2513613 - 2514533 + | putative acyltransferase TERM 3257 2514533 - 2514554 + T 74 -7.3 -4.24002 | opp_overlap 2514538, overlap 2514538 GTCACTCTACATCTG AAAAAGGCC GCAA GGCCTTTTA TTTTGGCATTTCGCA TERM 3258 2514549 - 2514538 - T 80 -7.2 -4.64766 | opp_overlap 2514538 2514533 TCTACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGGCATT TERM 3259 2514538 - 2514549 + T 87 -7.2 -5.10163 | opp_overlap 2514538, overlap 2514533 TCTACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGGCATT TERM 3260 2514621 - 2514638 + T 82 -5.5 -5.24989 | opp_overlap 2514621 GCTTTTAGCGATAAA TCTCCTG TTTA CAGGCGA TTTTTTACTGTGTCG TERM 3261 2515023 - 2515052 + T 86 -9.3 -4.4767 | opp_overlap 2515028, overlap 2515028 AAGTACAATGCAAAG AAAAACAGGAGCC ATGG GGCTCCTGTTTGC TTTTCTACTCCGTGC TERM 3262 2515047 - 2515028 - T 100 -13.6 -5.33026 | opp_overlap 2515028 2515023 CAATGCAAAGAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC TERM 3263 2515028 - 2515047 + T 100 -13.6 -4.28487 | opp_overlap 2515028, overlap 2515023 CAATGCAAAGAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC yfdZ 2516295 - 2515057 - | putative aminotransferase TERM 3264 2516076 - 2516063 - G 71 -9.5 -3.53091 | overlap 2516049 ATCGCGCGGCGTAAA CGCGG TATG CCGCG GGACGTGGAATAACC TERM 3265 2516893 - 2516909 + r 93 -13.7 -3.57144 | opp_overlap 2516893 AGGCAATGAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3266 2516909 - 2516893 - R 100 -13.7 -5.64006 | opp_overlap 2516893 AGGCAATGAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3267 2516951 - 2516998 + r 82 -12.9 -2.91593 | gap 1, opp_overlap 2516937 2516996, overlap 2516952 TTGCCTGATGACGCT GCGCTTATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAG-GC GTTTATGCCGCCATC TERM 3268 2516952 - 2516999 + r 95 -12.9 -3.86524 | gap 1, opp_overlap 2516937 2516996, overlap 2516951 TGCCTGATGACGCTG CG-CTTATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAGGCG TTTATGCCGCCATCT glk 2517983 - 2517018 - | Glucokinase TERM 3269 2517938 - 2517888 - G 76 -11.8 -3.03243 | opp_overlap 2517873, overlap 2517878 2517937 ATCCAGGCCGGAATA CGTTTTGGCCTGCGAGATTTCTCC ACT GGCGATATCACACAGGGCAAGACG CGCATTCGTGCCGCC TERM 3270 2519139 - 2519111 - g 71 -9.6 -3.53444 | gap 1, opp_overlap 2519119 TTAGCCGTCGTCAAA CTCGCCG-CGC TGGTCATC GCGGCGGCGAG CGGCTTTCGCGGCGG SEN2390 2518187 - 2519422 + | hypothetical protein SEN2391 2521094 - 2519442 - | putative decarboxylase TERM 3271 2519932 - 2519900 - G 88 -13.4 -3.40403 | overlap 2519918 2519922 GCGGCTGTACCACAA CTTCCGCGCCGTCA GGAAG CGACAGCGCGGCAG CGCCAAAGGCGGCGG TERM 3272 2520738 - 2520721 - G 74 -3.4 -4.85599 | opp_overlap 2520733, overlap 2520722 CTCATGCGATAAAAA TGACGA AAATCG CCGTCA CCGAGGGTATGGTGC TERM 3273 2521222 - 2521210 - H 70 -4.7 -4.49756 | CGGCAAACAGTAAAA GCCGG ATA CCGCC TGGCGAGTGTAACCG SEN2392 2521274 - 2522272 + | putative ion-channel protein ypeC 2522386 - 2522712 + | hypothetical protein TERM 3274 2522758 - 2522729 - T 72 -9.4 -3.61398 | opp_overlap 2522726 2522724 2522729 2522730, overlap 2522731 CCTCCTGCTGAATAA CA-GCCCGATGACG CCCA CG-CATCGGGCCTG CTATCTTTCTGTCTT TERM 3275 2522755 - 2522731 - T 85 -12.2 -3.38812 | gap 1, opp_overlap 2522730 2522729 2522726 2522724, overlap 2522729 TCCTGCTGAATAACA GCCCGATGACG CCCA CG-CATCGGGC CTGCTATCTTTCTGT mntH 2524014 - 2522773 - | manganese transport protein MntH TERM 3276 2523247 - 2523235 - G 86 -10.5 -4.19735 | GCCGCTAAAATGAAA CGCCG CCG CGGCG GTCGCCATCATTGCC TERM 3277 2523542 - 2523531 - G 75 -3.6 -4.83615 | CAGCGGCGACAAAAA GCAG TAAA CCGC CGATGACTTTTTCAA TERM 3278 2524045 - 2524030 - H 82 -7.6 -4.56597 | opp_overlap 2524030 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGTTT TERM 3279 2524030 - 2524045 + H 71 -7.6 -3.85082 | opp_overlap 2524030 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGTTT TERM 3280 2524950 - 2524971 + G 74 -7.3 -4.12397 | TGTGGTCGCAGCGCT GGTTCTGAA CATG TTCAGCACC TTTATCGTTCTGTCG nupC 2524357 - 2525559 + | nucleoside permease NupC TERM 3281 2525597 - 2525580 - T 95 -12.7 -3.97368 | opp_overlap 2525580 CGTTTAATGTAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCACT TERM 3282 2525580 - 2525597 + T 100 -12.7 -5.61596 | opp_overlap 2525580 CGTTTAATGTAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCACT yfeA 2527801 - 2525612 - | hypothetical protein TERM 3283 2525831 - 2525842 + g 74 -7.2 -4.15106 | GATTTTAATGATGTC CGCC TTGA GGCG TTTTAGCCGTTCATA TERM 3284 2526314 - 2526289 - G 70 -5.4 -4.52589 | gap 1, overlap 2526290 2526292 GTTGCGCATACAAAA CCAGCGCGCCG CGCTC CAGCGC-CTGA CGGATTTTCTGCAAC TERM 3285 2527963 - 2527982 + H 76 -9.2 -3.77831 | opp_overlap 2527963 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAATGTTGGTGG TERM 3286 2527982 - 2527963 - H 100 -11.4 -5.2197 | opp_overlap 2527963 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAATGTTGGTGG yfeC 2528407 - 2528769 + | hypothetical protein yfeD 2528771 - 2529163 + | hypothetical protein TERM 3287 2529166 - 2529204 + T 95 -14.8 -3.53761 | opp_overlap 2529168 2529175, overlap 2529168 2529171 2529175 TGAGGCGGACTAACA AAGAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTCTG TTTCAGCGGGCGTTA TERM 3288 2529202 - 2529168 - T 100 -17.4 -4.2461 | opp_overlap 2529168 2529166 2529171 2529175, overlap 2529175 AGGCGGACTAACAAA GAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTC TGTTTCAGCGGGCGT TERM 3289 2529168 - 2529202 + T 100 -17.4 -3.34517 | opp_overlap 2529168 2529175, overlap 2529166 2529171 2529175 AGGCGGACTAACAAA GAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTC TGTTTCAGCGGGCGT TERM 3290 2529171 - 2529199 + T 95 -13.3 -3.81488 | opp_overlap 2529168 2529175, overlap 2529168 2529166 2529175 CGGACTAACAAAGAA TAAACGGCAGG CGTCTGC CCTGCCGTTTA TTCTGTTTCAGCGGG TERM 3291 2529175 - 2529195 + T 90 -9.7 -4.52143 | opp_overlap 2529168 2529175, overlap 2529171 2529168 2529166 CTAACAAAGAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTGTTTCAG TERM 3292 2529195 - 2529175 - T 93 -9.7 -4.67968 | opp_overlap 2529175 2529171 2529168 2529166, overlap 2529168 CTAACAAAGAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTGTTTCAG gltX 2530632 - 2529217 - | Glutamyl-tRNA synthetase TERM 3293 2531318 - 2531286 - R 71 -9.9 -3.19463 | opp_overlap 2531287 2531295, overlap 2531287 2531295 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATATGGAA TERM 3294 2531287 - 2531317 + r 87 -14.9 -2.90763 | opp_overlap 2531287 2531286 2531295, overlap 2531295 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATATGGA TERM 3295 2531317 - 2531287 - R 80 -13.4 -2.51464 | opp_overlap 2531287 2531295, overlap 2531286 2531295 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATATGGA TERM 3296 2531295 - 2531309 + r 100 -8.5 -5.24989 | opp_overlap 2531295 2531287 2531286, overlap 2531287 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3297 2531309 - 2531295 - R 100 -9.2 -5.17576 | opp_overlap 2531287 2531295, overlap 2531287 2531286 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3298 2531334 - 2531360 + r 85 -13.8 -3.09834 | opp_overlap 2531334, overlap 2531336 2531344 ATCTGCGATATGGAA GATTCGAACCTG CAG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 3299 2531336 - 2531358 + r 73 -10.6 -3.10796 | opp_overlap 2531334, overlap 2531334 2531344 CTGCGATATGGAAGA TTCGAACCTG CAG CAGGTTCGGG TCTTGCCTGATGCGC xapR 2532332 - 2531448 - | xanthosine operon transcriptional regulator TERM 3300 2532263 - 2532238 - G 75 -11.9 -2.87564 | opp_overlap 2532231, overlap 2532243 GGAGGTTGTGACATA TTTAACCGGGC AGCA GCCCGGCCAAA ATGCAATTCTTCTGC TERM 3301 2532258 - 2532243 - G 76 -11.8 -3.15999 | opp_overlap 2532231, overlap 2532238 TTGTGACATATTTAA CCGGGC AGCA GCCCGG CCAAAATGCAATTCT TERM 3302 2532594 - 2532565 - R 88 -8.6 -4.82901 | overlap 2532567 CCTTGTTCATAAAAA TGGACTGGCGAA CATCCT CTCGCCAGTCAA ATAAAATTAATGTGC TERM 3303 2532592 - 2532567 - R 73 -11.2 -2.6933 | overlap 2532565 TTGTTCATAAAAATG GACTGGCGAA CATCCT CTCGCCAGTC AAATAAAATTAATGT xapB 2533857 - 2532601 - | xanthosine permease TERM 3304 2533897 - 2533883 - R 79 -9.2 -4.03234 | TTGCCGTGAGATAAA GCCCCA ATA CGGGGC CGTAGTCATTGTGTT xapA 2534835 - 2533912 - | xanthosine phosphorylase TERM 3305 2534669 - 2534659 - G 87 -8.2 -4.67048 | GGAGCCTAAAATAAA CGCG ACT CGCG GGGTAAATGCCGGTT yfeN 2535001 - 2535762 + | hypothetical protein TERM 3306 2535792 - 2535767 - T 70 -9.7 -3.06815 | ACCTGTTTTAACACA CTGCCCTGTCA AAAA TGGCAGGGCAA GACCGCACCTCACAC yfeR 2536750 - 2535824 - | putative transcriptional regulator TERM 3307 2536955 - 2536974 + G 79 -2.8 -5.28176 | overlap 2536957 TTGAAGGCATTACGA CAGCGG CCATCGCT CTGCTG TTTTTTATGCATGGC TERM 3308 2537174 - 2537190 + G 71 -7.3 -3.93288 | TTTTGCCCGCCACCG TGCAGTC GGC GATTGCA TTTACTTCACTCGCG TERM 3309 2537230 - 2537260 + G 81 -8.3 -4.34402 | gap 1 GTCGCGGCCGCGGTG TGCTCAGC-GTCTG CGTC CAGTCTGCTGGGCA TTTTCCTGTCGCCGC TERM 3310 2537683 - 2537654 - g 86 -4.1 -5.40072 | opp_overlap 2537656 2537657, overlap 2537655 2537656 GCGGTTCGAAAAAAA GCCTGGCCAACGG GATC CCGATGGCCAATA TTCTGTTTCCGACGT TERM 3311 2537681 - 2537656 - g 71 -11.1 -2.89655 | opp_overlap 2537656 2537657, overlap 2537655 2537654 GGTTCGAAAAAAAGC CTGGCCAACGG GATC CCGATGGCCAA TATTCTGTTTCCGAC TERM 3312 2537657 - 2537680 + G 72 -12.4 -2.69057 | opp_overlap 2537656 2537655 2537654, overlap 2537656 GTTCGAAAAAAAGCC TGGCCAACGG GATC CCGATGGCCA ATATTCTGTTTCCGA yfeH 2536840 - 2537838 + | hypothetical protein SEN2407 2538062 - 2537835 - | hypothetical protein lig 2540070 - 2538055 - | DNA ligase TERM 3313 2539158 - 2539135 - G 71 -8.1 -3.87551 | gap 1, opp_overlap 2539156 AGCAGGAAATTTAAA CGC-CACCGC CCAGC GCGGCGCGCG GGCCACAAAGCCCAG TERM 3314 2540110 - 2540094 - R 100 -10.8 -5.38249 | opp_overlap 2540094 2540107 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT TERM 3315 2540094 - 2540110 + r 74 -10.8 -3.17901 | opp_overlap 2540094, overlap 2540107 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT zipA 2541128 - 2540142 - | cell division protein TERM 3316 2541848 - 2541872 + G 80 -4.9 -5.06414 | opp_overlap 2541854 TATTCCTGGCATTGG CCAAACCATCG CGC CGGTGCTGTGG TTTTTGTTCAGCGCC cysZ 2541360 - 2542121 + | putative sulfate transport protein CysZ cysK 2542285 - 2543256 + | cysteine synthase A TERM 3317 2543300 - 2543285 - f 83 -6.1 -5.08011 | opp_overlap 2543285, overlap 2543276 AAAACGCGTAAAAAA GCACC TTTTTG GGTGC TTTTTTGTGGCCTGC TERM 3318 2543285 - 2543300 + F 87 -6.8 -5.26316 | opp_overlap 2543276 2543285 AAAACGCGTAAAAAA GCACCT TTTT GGGTGC TTTTTTGTGGCCTGC ptsH 2543640 - 2543897 + | phosphocarrier protein HPr ptsI 2543946 - 2545673 + | phosphoenolpyruvate-protein phosphotransferase (ec 2.7.3.9) (phosphotransferase system, enzyme i) TERM 3319 2546123 - 2546107 - g 74 -2.2 -5.06414 | opp_overlap 2546118 TTGCTGGAAGAAAAA GCCAAG TCTAC CCTGAC TCCGGTTGTTATCTC crr 2545714 - 2546223 + | pts system, glucose-specific IIA component TERM 3320 2546260 - 2546243 - T 93 -12.7 -3.67597 | opp_overlap 2546243 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTTGCCTGTA TERM 3321 2546243 - 2546260 + T 100 -12.7 -5.83822 | opp_overlap 2546243 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTTGCCTGTA SEN2415 2546626 - 2546387 - | hypothetical protein pdxK 2547489 - 2546623 - | pyridoxine kinase TERM 3322 2548048 - 2548092 + G 74 -2 -5.02476 | gap 1, overlap 2548051 TGAAAGACTGCTTTG CGCGCATCTGCTGCCG-GGCG ACAG CGTCGCGGTGGAAGATCCCTG TTTTTTAAGCAGTAT ptsJ 2547572 - 2548864 + | putative transcriptional regulator yfeJ 2548879 - 2549598 + | putative amidotransferase yfeK 2549657 - 2550040 + | hypothetical protein TERM 3323 2550117 - 2550097 - T 78 -11.9 -3.06183 | opp_overlap 2550097, overlap 2550099 2550101 GTTATTCTCATGCAA CAGACCTGC CAG GCAGATCTG TTGCTTAAAAAGTAG TERM 3324 2550097 - 2550117 + T 73 -9.7 -3.34344 | opp_overlap 2550097 2550099 2550101 GTTATTCTCATGCAA CAGACCTGC CAG GCAGATCTG TTGCTTAAAAAGTAG SEN2420 2550748 - 2550140 - | hypothetical protein cysM 2551911 - 2551000 - | cysteine synthase B TERM 3325 2551872 - 2551892 + g 85 -8.9 -4.38273 | GACGTTGTAATTTGA CCAGCGGCG TAT TGCCGATGG TTTGTTCTAATGTAT TERM 3326 2551956 - 2551931 - R 100 -13.3 -5.02074 | gap 1 TCAGCTCGTAAAAAA GCCCGGTATGCG TAG CGC-CACCGGGC GATAACTATACAAAT cysA 2553076 - 2551979 - | sulphate transport ATP-binding protein CysA TERM 3327 2552636 - 2552650 + g 81 -7.1 -4.82901 | GGCAAGCGCGCGCGC CAGCG CCACA CGCTG TTTTTGTCCGCCGGA TERM 3328 2552876 - 2552847 - G 70 -3.4 -4.78848 | TGCTGAAACACAAAA CCGACTTTACGC TCACGC GCGTGCAGGCGG CTAACGTCCGTACCG cysW 2553941 - 2553066 - | sulphate transport system permease protein CysW cysU 2554774 - 2553941 - | sulphate transport system permease protein CysT cysP 2555790 - 2554774 - | thiosulphate-binding protein precursor TERM 3329 2555937 - 2555910 - R 95 -12.8 -3.84992 | gap 1, overlap 2555897 2555911 AAGGGAATAAGAGAA TC-CCTCCCCACG CGG CGTGAGGAGGAGA CCGGCATCAATCAGA TERM 3330 2555935 - 2555911 - R 87 -14.3 -2.8991 | overlap 2555897 2555910 AGGGAATAAGAGAAT CCCTCCCCACG CGG CGTGAGGAGGA GACCGGCATCAATCA ucpA 2556739 - 2555948 - | putative oxidoreductase TERM 3331 2556874 - 2556857 - R 100 -12.7 -5.48825 | opp_overlap 2556853 TATTAGGTAAAAAAA TCCCCGC GGAG GCGGGGA TGGGCATTTTTATGC SEN2427 2557876 - 2556977 - | hypothetical protein TERM 3332 2557790 - 2557804 + g 74 -7 -4.29845 | GCTGGCCGCGCGCAG GGCGTC CAG GTCGCC TTTTACATTGGCTTC TERM 3333 2557898 - 2557915 + r 77 -11.3 -3.15427 | opp_overlap 2557898 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGCTATT TERM 3334 2557915 - 2557898 - R 86 -11.3 -3.68359 | opp_overlap 2557898 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGCTATT SEN2428 2558546 - 2557971 - | putative lipoprotein TERM 3335 2558386 - 2558414 + g 87 -13.8 -3.19389 | GCCGGCTCTTCCAGC GGCGTGGCGGCG GTCAG CGCTCCCACGCC TTGCTCAGTGACTTC yfeZ 2559057 - 2558608 - | hypothetical protein SEN2430 2559469 - 2559044 - | putative acetyltransferase TERM 3336 2559856 - 2559839 - g 91 -2.5 -5.79588 | CCAAAACCAAAAAAA CCGGCAG TAAA CGGCTGG TGATGCTCGACCCCG TERM 3337 2560109 - 2560120 + G 72 -3.6 -4.70879 | opp_overlap 2560098 2560105, overlap 2560105 CTAACCCGAAAGCAG CGGG CGCT TCCG TTTTTGCGCTTTCCA TERM 3338 2560483 - 2560472 - g 71 -5.8 -4.36914 | CGTTTCGCCAGAAAA TCGC TACG GCGA TCGCCAACGGCATCA amiA 2559682 - 2560551 + | probable N-acetylmuramoyl-L-alanine amidase TERM 3339 2560912 - 2560902 - g 71 -4.6 -4.58395 | opp_overlap 2560902 TTTATTGCCGAAAAA CCGG GCG CCGA TCCGGTATGGTGGTT hemF 2560554 - 2561453 + | Coproporphyrinogen III oxidase, aerobic SEN2433 2561474 - 2561803 + | hypothetical protein TERM 3340 2562118 - 2562131 + T 73 -9.5 -3.30124 | opp_overlap 2562098 2562097 CGCTTCCCCGGAGGC GGCGC TGGC GCGCC TTGTCCGGGCTACCA eutR 2563304 - 2562252 - | ethanolamine operon transcriptional regulator eutK 2563846 - 2563352 - | ethanolamine utilization protein EutK eutL 2564518 - 2563859 - | ethanolamine utilization protein EutL eutC 2565424 - 2564528 - | Ethanolamine ammonia-lyase light chain TERM 3341 2564834 - 2564816 - G 73 -8.8 -3.91144 | opp_overlap 2564820, overlap 2564819 2564820 GCCATAGCGCACAAA GAACGGCG TGC CGACGTTC AGCCCGGCCTGCTTC TERM 3342 2564980 - 2565023 + g 72 -2.2 -4.88736 | gap 1, opp_overlap 2564994 GCGCGTCAATGGCTT CCGGGCTCAGACGACGCCC CATATCC GGGCG-CGTCAGGTACAGG TTTTTGTCGCTGATC eutB 2566804 - 2565443 - | ethanolamine ammonia-lyase heavy chain eutA 2568219 - 2566816 - | putative ethanolamine utilization protein EutA TERM 3343 2567172 - 2567140 - G 75 -12.8 -2.55351 | gap 1, overlap 2567139 2567148 2567149 CGGGTCGAGATCAAG CTGGAGAAGCGCCTG CCGC CAGGCG-TTCACCAG ATCGGCGTCATCCTG TERM 3344 2567884 - 2567872 - G 76 -9.1 -3.96148 | GCTGGCGACCACAAA GTCGC CCA GCGAC TGCGAGAGCGTCATG eutH 2569442 - 2568216 - | hypothetical protein TERM 3345 2569241 - 2569208 - G 71 -8.1 -3.80174 | gap 1, overlap 2569222 ATACCGGGATAATAA CCGGCCCCAGTACATG CGC CA-GCACCGGCGCCAG CGCGGTCATACCGAC TERM 3346 2569425 - 2569407 - G 74 -7.5 -4.12857 | opp_overlap 2569406 2569407 2569409 AATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC eutG 2570749 - 2569562 - | putative alchohol dehydrogenase TERM 3347 2570653 - 2570682 + g 70 -7.1 -4.11484 | gap 1 CGAGCGCCCCAAGTC CGCACAGCGTGACC GGC GGT-ACGCTGAACG TTTTCACCCGTTGCA eutJ 2571578 - 2570739 - | putative ethanolamine utilization protein EutJ TERM 3348 2571474 - 2571513 + g 76 -12.9 -2.70932 | opp_overlap 2571473 2571472 2571476, overlap 2571476 2571502 GCAGGTGCCCAAATC GACGCCCAGCC-ACAGCGG CGCG TCGCTGGCGGC-GGGCGTC TGGTTACACAGGGCC TERM 3349 2571502 - 2571533 + g 91 -10 -4.66953 | opp_overlap 2571476 2571473 2571472, overlap 2571476 2571474 AGCGGCGCGTCGCTG GCGGCGGGCGTCTG GTTA CACAGGGCCGCCGC TTTTTGCAGTCTTGG eutE 2572992 - 2571589 - | putative aldehyde dehydrogenase TERM 3350 2572270 - 2572302 + g 71 -6.1 -4.33803 | CTCATCCACCACCAC CGGGGGATTGCCGGC ACC GGCGGCAATCAGGCG TTTATTAGTATGTTT TERM 3351 2572690 - 2572711 + g 83 -7.9 -4.60924 | opp_overlap 2572676 2572678 ACACTCGACGCCCGG CGTGCCGCG CGCC TGCGCCACG TTTTTGGCAAATTTA eutN 2573303 - 2573004 - | ethanolamine utilization protein TERM 3352 2573376 - 2573388 + r 70 -9.1 -3.30124 | overlap 2573355 TTCATGCCGGATGGC GACGC TGC GCGTC TTATCCGGCCTACCA eutM 2573694 - 2573404 - | ethanolamine utilization protein eutD 2574751 - 2573735 - | putative phosphate acyltransferase TERM 3353 2573969 - 2573995 + g 73 -5.1 -4.56597 | gap 1, overlap 2573972 AATCATCACGTTGGC GCGGCCTTGCAG CGGG CTGTCAGGC-GC TTTTTGCGCGGCGAC eutT 2575551 - 2574748 - | putative cobalamin adenosyltransferase TERM 3354 2575229 - 2575247 + g 75 -6.6 -4.37886 | overlap 2575203 2575230 CGAAAGCCGAGGCGC GGGTCGCT TTT GGCGACCA TTTTGTCCGCCGTCA eutQ 2576237 - 2575548 - | putative ethanolamine utilization protein EutQ TERM 3355 2576032 - 2576049 + g 73 -5.5 -4.57569 | GCGATGATGGCTTCC CGAATGC GCTG GCTTTCG TTTTTACACGCCTGC eutP 2576694 - 2576215 - | putative ethanolamine utilization protein EutP eutS 2577042 - 2576707 - | putative ethanolamine utilization protein EutS TERM 3356 2577436 - 2577419 - R 100 -12.7 -5.60993 | overlap 2577430 CGGCGCATAAAAAAA GCGCAGG AGAA CCTGCGC CAGAAGAGAGAGTAA maeB 2579738 - 2577459 - | NADP-dependent malate dehydrogenase (decarboxylating) TERM 3357 2577893 - 2577873 - G 83 -10.4 -3.92324 | CGGCTCAATACCAAA GCGGCGAA CGGTT TCCGCCGC CATTACGGCGATCTC TERM 3358 2579082 - 2579100 + g 74 -7.4 -4.18018 | AACGCCCTTAGAGTC GCACACCA CGA TGTTGTGC TTTTGCATCCCCAAC talA 2580010 - 2580960 + | Transaldolase TERM 3359 2582961 - 2582951 - g 72 -2.4 -4.87273 | AATATTGTAGAAAAA GCCC GCC GGGT GCTGAACATCAAAGG tktB 2580980 - 2582980 + | transketolase 2 TERM 3360 2583002 - 2583042 + T 90 -14.2 -3.40371 | opp_overlap 2582996 2583000 2582998 2583002, overlap 2583003 CGTTAGCAACACAGA CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3361 2583042 - 2583002 - T 79 -12 -3.12449 | opp_overlap 2583002 2583003, overlap 2582996 2583000 2582998 CGTTAGCAACACAGA CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3362 2583003 - 2583041 + T 100 -17.7 -2.63901 | opp_overlap 2582996 2583002 2583000 2582998, overlap 2583002 GTTAGCAACACAGAC TTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAA ATTACTTCGTAGACT SEN2454 2583273 - 2583043 - | hypothetical protein ypfG 2584444 - 2583401 - | hypothetical protein TERM 3363 2583652 - 2583666 + g 100 -7 -5.47218 | opp_overlap 2583632 GCCGCAAACGTACGG CGCGCG AGA CGAGCG TTTTTTTGCGTGAAA TERM 3364 2584550 - 2584561 + r 95 -3 -5.81412 | opp_overlap 2584550 TCTTTTTTGTGTAAA GAAA TATA TTTC TTTTTTTTCAGTCCA yffH 2585144 - 2584569 - | hypothetical protein TERM 3365 2585523 - 2585499 - g 88 -11.5 -4.21922 | opp_overlap 2585497 2585499 GGATTCAAAATCAAA TTGATGCCGGA TAT CCCAGCATCAA TCTTCTGGTGATAAA SEN2457 2585348 - 2586646 + | hypothetical protein TERM 3366 2586955 - 2586943 - T 72 -9.1 -3.5393 | ATCAGGCCTGTTAAA CGTCG ACC CGACG GGAAAATGTTTATCG aegA 2589056 - 2587095 - | putative oxidoreductase TERM 3367 2587435 - 2587425 - G 71 -4.6 -4.65895 | overlap 2587433 CCGCGTACGCAAAAA GCGA ATA CCGC TGGCGCGCCCGTGCG TERM 3368 2587494 - 2587512 + g 74 -4.5 -4.69464 | GTTAAATTCAAAGTT CGCGC CCTCTTCCC GCGCG TTTTTCACCTCTTTT TERM 3369 2589260 - 2589282 + G 100 -8.4 -5.48787 | ACGGTTAAACGCCCG GTCTCAGCCA GTC TGGCTAAGGC TTTTTTCTATATTGT TERM 3370 2590324 - 2590295 - g 75 -5.7 -4.60889 | overlap 2590297 AATCAGGCGCAAAAA CACTTCCAGCAAC TTTT GTTAATGGAAGAG CGCGCGACGATTGCC TERM 3371 2590743 - 2590710 - g 76 -10.9 -3.66874 | opp_overlap 2590701 CCAACGCGAGCGAAA TCGCCGTGAGCTGCG TCAC CGCGCCTGACGGCGA TCATACCGTTTATAT narQ 2589242 - 2590942 + | nitrate/nitrite sensor protein NarQ TERM 3372 2590994 - 2590947 - f 71 -7.7 -4.01381 | opp_overlap 2590964, overlap 2590954 2590955 AGTTAACGTAAAGAA CG-GCAAATCGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCG-TTGGCACA AAAAGTATGCTGTAA TERM 3373 2590987 - 2590954 - f 93 -12.3 -3.74238 | opp_overlap 2590964, overlap 2590947 2590955 GTAAAGAACGGCAAA TCGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCGT TGGCACAAAAAGTAT TERM 3374 2590986 - 2590955 - f 93 -15.8 -2.8382 | opp_overlap 2590964, overlap 2590954 2590947 TAAAGAACGGCAAAT CGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCG TTGGCACAAAAAGTA TERM 3375 2592947 - 2592935 - g 75 -4.1 -4.9218 | CACCCATGAGAAAAA CAACA TTA TGTCG GTCTTCTCGACGGTC TERM 3376 2593340 - 2593326 - g 70 -5.6 -4.45945 | ATTGACCAACGAAAA GCGCAG GCG CTGGGC GTATCGATTGACGAT acrD 2591127 - 2594240 + | putative efflux pump TERM 3377 2594276 - 2594306 + F 70 -9.1 -3.34962 | opp_overlap 2594281, overlap 2594281 GAGGTGTCGGGCACA AAAAAGGCGACTT TCGTT GAGTCGCCTTTTC TTATCCCCTATGGGA TERM 3378 2594301 - 2594281 - f 100 -8.3 -5.24129 | opp_overlap 2594281 2594276 GTCGGGCACAAAAAA GGCGACT TTCGTTG AGTCGCC TTTTCTTATCCCCTA TERM 3379 2594281 - 2594301 + F 93 -9 -4.78237 | opp_overlap 2594281, overlap 2594276 GTCGGGCACAAAAAA GGCGACTT TCGTT GAGTCGCC TTTTCTTATCCCCTA TERM 3380 2594328 - 2594340 + F 79 -7.7 -4.41348 | CCTATGGGAGCGCGG TGCCT TCC AGGCA TTTATTTACGAAGCA yffB 2594814 - 2595170 + | hypothetical protein TERM 3381 2595306 - 2595322 + G 73 -5.1 -4.59773 | ATTGAGCATATGGAT TTTGGCG ACA CGCAAAA TTTTTGGGCATGGCG TERM 3382 2596144 - 2596156 + G 85 -9.1 -4.38154 | overlap 2596130 TGACGACGGGCGGTA CGTCC GAC GGACG TTTTATCGCCCGTAT dapE 2595174 - 2596301 + | succinyl-diaminopimelate desuccinylase SEN2463 2596329 - 2596529 + | hypothetical protein TERM 3383 2596565 - 2596540 - T 82 -11.2 -3.52459 | overlap 2596530 AGTAACCGGATATAA TGCCGGACAG GTATCG CTATCCGGCA TGCTCCCCACCGCCG ypfI 2598574 - 2596556 - | hypothetical protein TERM 3384 2597078 - 2597051 - G 71 -7.7 -3.99324 | overlap 2597070 2597071 CCGTACCAGTACAAA GCCGCAGCGTT GCCAGA AACGCCACAGC TCCGGCGTATAGCCG SEN2465 2599453 - 2598590 - | hypothetical protein TERM 3385 2599571 - 2599550 - R 74 -11.5 -2.90054 | overlap 2599545 GAGGAAAGGATGATA CCGGAGAGC GGTT GCCCCCCGG TCAGAAGCGGAATTA purC 2600297 - 2599584 - | Phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3386 2600464 - 2600445 - R 100 -11.4 -5.31275 | opp_overlap 2600445 2600443 TCTTATCAGAAAAAA GGGCCGGA TTAC TCCAGCCC TGTTAAATTACTTGT nlpB 2601506 - 2600472 - | putative lipoprotein dapA 2602401 - 2601523 - | Dihydrodipicolinate synthase gcvR 2602547 - 2603119 + | glycine cleavage system transcriptional repressor bcp 2603119 - 2603589 + | hypothetical protein SEN2471 2604775 - 2603636 - | probable glycerate kinase SEN2472 2606070 - 2604781 - | putative permease TERM 3387 2604931 - 2604919 - G 71 -4.7 -4.56597 | overlap 2604920 CGTCGCGTGGAAAAA GCTGC CGT GCGGC AGATGGTCCAGCACC TERM 3388 2605094 - 2605074 - G 75 -12.5 -2.64616 | TCGCCATTGACATCA TGGCGCCAG ACA CGGGCGCCA GCAGCCAGGATGGCA TERM 3389 2605382 - 2605356 - G 93 -11.6 -4.40993 | overlap 2605358 GAGAAAGCAGGAAAA TAGCGACCAGCG GCG CGCTAATCGCCA CCAGAAAACCGGGTC TERM 3390 2605380 - 2605358 - G 86 -12 -3.79533 | overlap 2605356 GAAAGCAGGAAAATA GCGACCAGCG GCG CGCTAATCGC CACCAGAAAACCGGG SEN2473 2607304 - 2606117 - | conserved regulatory protein TERM 3391 2607472 - 2607453 - R 100 -9.3 -5.18726 | TTCCGACAATAAAAA TGCCGCA ACACGG TGCGGCA TTAAAAAAAAGAGCG perM 2608647 - 2607580 - | hypothetical protein TERM 3392 2609197 - 2609212 + G 71 -4.6 -4.65895 | TTTGGCGGCAATGTG GTGCTG CACT CGGCGC TTTTTCGCTACGCGG TERM 3393 2609326 - 2609316 - g 83 -8.2 -4.43681 | opp_overlap 2609317, overlap 2609317 GATGGAAGATCAAAA GCGC AGC GCGC CGCTTACCTGGGTGG SEN2475 2608855 - 2610318 + | hypothetical protein yfgD 2610358 - 2610717 + | putative arsenate reductase (arsenical pump modifier) TERM 3394 2610726 - 2610741 + T 79 -11.8 -3.12668 | overlap 2610718 CGGTTAACCGTTGAA CGCCGC CGTC GCGGCG TATTACAGTTTCAGA yfgE 2611469 - 2610744 - | hypothetical protein TERM 3395 2611532 - 2611512 - R 100 -18.3 -3.58726 | opp_overlap 2611529 TCCCGTGAGATAGAA CCGGGCAGC ATC GCTGCCCGG CAACCCGTTACTGAT TERM 3396 2611544 - 2611564 + r 100 -14.1 -3.65902 | CCGGCAACCCGTTAC TGATGCGGA GGC TCCGCATCA TTTGCCTCCAGTACC uraA 2612829 - 2611540 - | uracil permease (uracil transporter) TERM 3397 2612489 - 2612499 + g 74 -2.4 -5.03314 | ATCACATCCAGCCAG CCGG TGC CCGC TTTTTTAACGATGAA TERM 3398 2612562 - 2612552 - G 72 -2.4 -4.84311 | CCGCACATAATAAAA CCGC CCA GCGC CACTTCATAACCCAG TERM 3399 2612875 - 2612903 + r 74 -10.4 -3.13412 | opp_overlap 2612880, overlap 2612880 GTGGTTTTATTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTTA ATTATTTATTCACTT TERM 3400 2612898 - 2612880 - R 100 -11 -5.81412 | opp_overlap 2612875 2612880 TTTATTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTTAATTATTTATT TERM 3401 2612880 - 2612898 + r 93 -10.3 -4.65969 | opp_overlap 2612880, overlap 2612875 TTTATTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTTAATTATTTATT upp 2613543 - 2612917 - | Uracil phosphoribosyltransferase TERM 3402 2613869 - 2613849 - H 100 -6.7 -5.82316 | overlap 2613850 2613864 ACCATGCAAAAAAAA TCGCCCGGA TAA TCAGGGCGC AGACCACGCTCGCAA TERM 3403 2613868 - 2613850 - H 87 -10.2 -4.07763 | overlap 2613849 2613864 CCATGCAAAAAAAAT CGCCCGGA TAA TCAGGGCG CAGACCACGCTCGCA TERM 3404 2613953 - 2613940 - H 83 -2.3 -5.78622 | TTACCGCAAAAAAAA CGTGG GGAA CCAGG CAGTGACCGATAAGA purM 2613941 - 2614993 + | Phosphoribosylformylglycinamidine cyclo-ligase TERM 3405 2615119 - 2615103 - g 70 -9.4 -3.73914 | overlap 2615104 AGTATTCAGCAATAA GGCCGA CGCGT TCGGCC TTGAACGCGCCAGAG TERM 3406 2615150 - 2615137 - g 71 -9.5 -3.494 | opp_overlap 2615138 GAACGCGCCAGAGAA GCCGG CATT CCGGC GCAAGCGCTGACTGC purN 2614993 - 2615631 + | phosphoribosylglycinamidine myltransferase TERM 3407 2617220 - 2617210 - g 91 -6.8 -5.27477 | ACTTCAACGAAAAAA CAGC GCG GCTG TATACCGATTATTCG ppk 2615820 - 2617886 + | Polyphosphate kinase TERM 3408 2618043 - 2618017 - g 83 -10.1 -4.07687 | ATCGGGCGTTTAAAA CAGCGCGTCCA TCTGG CGGACGGGCTG GGCGCAGATAATAAA TERM 3409 2618387 - 2618418 + G 81 -12.4 -3.53343 | gap 1, overlap 2618391 2618393 TGGTTGAAAGCCGTC GTATGGGCTGCGTGA GCT TCGCGCAGCTC-TAC TTTCCCGGCGGCGTT TERM 3410 2618391 - 2618415 + G 86 -14.3 -2.90496 | overlap 2618387 2618393 TGAAAGCCGTCGTAT GGGCTGCGTGA GCT TCGCGCAGCTC TACTTTCCCGGCGGC TERM 3411 2618393 - 2618413 + G 81 -13.3 -3.00525 | overlap 2618391 2618387 AAAGCCGTCGTATGG GCTGCGTGA GCT TCGCGCAGC TCTACTTTCCCGGCG ppx 2617891 - 2619432 + | exopolyphosphatase TERM 3412 2619440 - 2619466 + T 100 -18 -3.78022 | opp_overlap 2619435 2619434 CCGCGTAAATTGTGA GCCAGACGCCGC GCC GCGGCGTCTGCC TTTACTGAATCTCAG SEN2484 2621681 - 2619468 - | hypothetical protein TERM 3413 2621831 - 2621804 - R 70 -2.1 -4.96388 | opp_overlap 2621799, overlap 2621799 AATTATTAAACAAAA GTAACATTTGA TTTAAG TCAATTATTAC CTTTCTCCTGCAGCC SEN2485 2622246 - 2621986 - | hypothetical protein TERM 3414 2623034 - 2623016 - g 71 -4.6 -4.58085 | overlap 2623019 ATATTGAGAAAGAAA TTATCGAT TTT ATCGATCA GGAATATAACACTAA SEN2488 2622979 - 2623308 + | hypothetical protein SEN2489 2623669 - 2623328 - | putative transposase TERM 3415 2623789 - 2623770 - R 100 -10 -5.42975 | opp_overlap 2623770 GCACATAAATAAAAA CCCTCTGC AAAA ACAGAGGG TTAAATTCACTTTTA guaA 2625415 - 2623838 - | glutamine-hydrolyzing GMP synthase TERM 3416 2625478 - 2625455 - R 100 -13.9 -4.56113 | AACAGATTAAATAAA TCGCCCGAC GCGAAG GTCGGGCGA AGAAAATCAGGAGCC guaB 2626951 - 2625485 - | inosine-5'-monophosphate dehydrogenase TERM 3417 2625951 - 2625927 - G 71 -8.5 -3.85817 | opp_overlap 2625949, overlap 2625949 ATGTCGCCGGAGAAA CGGATACCGCC GTC AGCGATAACCG GAATCCCGGTGCCTT TERM 3418 2628303 - 2628333 + G 81 -11.9 -3.53012 | gap 1 CTGGAAGCGGTCAGC CCGT-TAGCCACGC TGGC GCGCGGCTATACGG TTTCGACGACAACGG xseA 2627112 - 2628461 + | exonuclease VII large subunit TERM 3419 2628611 - 2628589 - T 100 -14.1 -4.08216 | opp_overlap 2628589 TCATTCGCCTCAAAA CCGGGCAGG GAACA CCCGCCCGG TTTTGTCTAACTTAC TERM 3420 2628589 - 2628611 + T 100 -12.7 -4.57474 | gap 1, opp_overlap 2628589 TCATTCGCCTCAAAA CCGGGCAGGG AACA CCC-GCCCGG TTTTGTCTAACTTAC shdA 2634688 - 2628623 - | host colonisation factor (ShdA) TERM 3421 2632666 - 2632680 + g 76 -10 -3.90318 | GCGTGCCCTGGCTCA GCGCAA GCG TTGCGC TTTCTGCAATCGTCA TERM 3422 2632714 - 2632745 + g 78 -13.8 -2.67244 | gap 1, overlap 2632696 2632694 2632712 2632725 CGCCAGTGCCGAGCG CGGCGGCGTCTTTGG CGG CCAGA-ATGCCGCCG TCAATTTCAGTATCG TERM 3423 2633195 - 2633222 + g 70 -6.9 -4.08939 | GGCTTTGATAATTGG CGCGCTGTTGG CGGTAT CCAGCGTCGCG TTTATCTGGCTGTTA TERM 3424 2634546 - 2634565 + g 80 -4.2 -5.05116 | gap 1, opp_overlap 2634550, overlap 2634548 2634549 2634550 GCAGCCACGGCGCAA GCCA-GCGC CGC GCGCGTTGC TTTTATTATTTGTCC TERM 3425 2634618 - 2634631 + g 71 -8.1 -3.8822 | GAATGGATTTCACTC GCGCA TACT TGCGC TTTAACTTTGCTGTG TERM 3426 2636474 - 2636488 + r 71 -3.4 -4.74706 | opp_overlap 2636453 2636474 GTATTCCGCATCACA GCCGGT TGC GCCAGC TTTTTCAGTGTTCGC TERM 3427 2638336 - 2638386 + r 86 -11.7 -3.56643 | opp_overlap 2638334 2638335 GCGTAGCGCTAAACT CGCTGGCCAGCAGCGGACGCCTG TACGC CACGCCGCTGCTGTCGGTCAGCG TTTCCGCCATATGGC TERM 3428 2638493 - 2638506 + r 83 -9.5 -4.07568 | overlap 2638491 2638501 GTTGTGCTCTATTGC CGCCG TCAG CGGCG TTTTAAAGCCCGCGC TERM 3429 2639460 - 2639475 + r 77 -10.4 -3.33798 | overlap 2639458 GCCGAGACGATGCCG TCGCCG CTAC CGGCGA TATGTTTCTCCCCCT TERM 3430 2639558 - 2639525 - R 70 -9.4 -3.36273 | opp_overlap 2639526, overlap 2639526 GCGGCTTAACACGAA CGGCGCCTGCGGCA GCGGAT TGCCGCTGGCGTCT TTTACCGTCACTTTA TERM 3431 2639557 - 2639526 - R 81 -12.9 -2.6155 | opp_overlap 2639526, overlap 2639525 CGGCTTAACACGAAC GGCGCCTGCGGCA GCGGAT TGCCGCTGGCGTC TTTTACCGTCACTTT TERM 3432 2639526 - 2639557 + r 100 -15.8 -4.15854 | opp_overlap 2639525 2639526 CGGCTTAACACGAAC GGCGCCTGCGGCAG CGGA TTGCCGCTGGCGTC TTTTACCGTCACTTT TERM 3433 2639579 - 2639591 + r 72 -4.7 -4.66833 | CGTCACTTTAAGCTG GAGCG TAT CGCCC TTTTTCACCTTCACC TERM 3434 2639975 - 2640005 + r 72 -8.8 -3.55563 | overlap 2639976 2639993 ATCCTGCTCCTGGGT ACGGGTGGCGGCAG TCG CTTCCGCCGCCAGC TTTGGCCGCTGGAAT TERM 3435 2639976 - 2640004 + r 78 -12.3 -2.73124 | overlap 2639975 2639993 TCCTGCTCCTGGGTA CGGGTGGCGGCAG TCG CTTCCGCCGCCAG CTTTGGCCGCTGGAA TERM 3436 2640277 - 2640267 - R 72 -8.2 -3.66803 | TGGGAAGAGCCGAAA GGCG TTC CGCC CATCACCAGCGTTCC TERM 3437 2640316 - 2640332 + r 78 -6.5 -4.62069 | AGTCGGTAAAGCCCG TCGTGGC GTT GTCGCGA TTTTTGCCGTGCGCC TERM 3438 2640802 - 2640820 + r 80 -9.5 -3.9777 | TATCCTGCGCGGCTT CGTCCGC CAGCA GCGGGCG TTTGTAGATATTGCC TERM 3439 2641651 - 2641671 + r 100 -16.9 -2.90763 | opp_overlap 2641638 AGGTGTAGCTTGCGC CGTCCACCG TGG CGGTGGACG TCTCTGCCATATGAC ratA 2648452 - 2642855 - | putative exported protein (RatA) TERM 3440 2644493 - 2644511 + g 71 -4.5 -4.66833 | overlap 2644495 GGTAGTGGTGATGAG TAGCGGG ATCGA CTCGCTG TTTTTCGCCTTCACC TERM 3441 2644621 - 2644637 + g 71 -5.8 -4.36914 | TTTGATACTGCCAGG CAGTGC TGGTC GCGCTG TTTTCTGACCGACGC TERM 3442 2646737 - 2646765 + g 77 -11 -3.56378 | gap 1, overlap 2646718 2646735 2646728 GTCCGGCATCACGAT GCGG-ATGGGCGT TTCG ACGCCCAGGCCGC TGTTATGTTTTAACG TERM 3443 2648527 - 2648493 - R 100 -15.9 -3.17075 | TCTGTCGTAATTCAA CCCACTTTGCTTAGC GCGCG GCTAAGCAAAGTGCG CGGAAAATACCACTC TERM 3444 2648558 - 2648535 - R 100 -15.4 -4.0896 | opp_overlap 2648535 2648537 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3445 2648535 - 2648558 + r 93 -15.4 -3.02043 | opp_overlap 2648535, overlap 2648537 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3446 2648537 - 2648556 + r 85 -13.6 -3.06696 | opp_overlap 2648535, overlap 2648535 AGTGCGCGGAAAATA CCACTCCC CGCG GGGAGTGG TATGTTGAGGACAAC sinI 2649531 - 2648572 - | hypothetical protein TERM 3447 2650097 - 2650131 + r 81 -3.4 -5.38249 | overlap 2650101 ATAAACACGCAGGGG GTTTCCGTGGTGCAGG GCG TCTGGGCCAGGGTGAC TTTTTTATCATTGCT TERM 3448 2651629 - 2651615 - R 72 -8.6 -3.71148 | ATAGCAAAACCAGAA TGCGAA TCC TTCGCA CCATATGATATCCCT TERM 3449 2651949 - 2651976 + r 72 -4.8 -4.71426 | gap 1, opp_overlap 2651936, overlap 2651952 AAGACGTCGGCGCCT CTGCTCTGCGGCG CAA CGTCG-ACAGCGG TTTTATTGATCGGAA yfgJ 2652200 - 2651979 - | hypothetical protein TERM 3450 2652267 - 2652240 - R 79 -10.6 -3.60296 | gap 1, opp_overlap 2652235 CACTTTTACTTGAAA GGCCTGA-TAGCG CAG CGCTTGTCAGGCC TGGAATATTACTGAA engA 2653761 - 2652289 - | putative GTP-binding protein TERM 3451 2653858 - 2653828 - R 74 -11.2 -2.93708 | opp_overlap 2653833, overlap 2653833 CGTTGTTAAAAACAG GAAAACGGCCCCTA CAC CAGGAGCCGTTTTT TAAAACACACAACCG TERM 3452 2653833 - 2653853 + r 91 -8.2 -5.00616 | opp_overlap 2653833 2653828 TTAAAAACAGGAAAA CGGCCCCT ACACC AGGAGCCG TTTTTTAAAACACAC TERM 3453 2653853 - 2653833 - R 95 -11.1 -4.60746 | opp_overlap 2653833, overlap 2653828 TTAAAAACAGGAAAA CGGCCCCTA CAC CAGGAGCCG TTTTTTAAAACACAC yfgL 2655058 - 2653880 - | putative lipoprotein yfgM 2655689 - 2655069 - | hypothetical protein TERM 3454 2655150 - 2655164 + g 79 -2.7 -5.25803 | overlap 2655150 2655151 GACGCCCGCTTCCCA TGCGC TGCGC GCGCC TTTTTTATCACCCTT TERM 3455 2655428 - 2655438 + g 91 -6.8 -5.18726 | opp_overlap 2655400 CCATAGACGCCAGCG CACC ATA GGTG TTTTTATTCTCAGCC TERM 3456 2655764 - 2655716 - R 76 -8.1 -4.1822 | gap 1, opp_overlap 2655745 2655756 CCTTAGCCCAATAAA GTGCGCAAATGCGCGGCGACGC TGTCCT GCGCCACTGC-CGTTTGCTCAC CGGAGCGCAAATCCT hisS 2656977 - 2655703 - | Histidyl-tRNA synthetase TERM 3457 2656869 - 2656885 + g 70 -3 -4.71061 | gap 1 GGATTTCACTGTAAC CGTAGCT GCCG AGC-ACG TTTTTGAGTGTGCCT TERM 3458 2656941 - 2656966 + g 84 -6.1 -5.03747 | opp_overlap 2656941 CGCCAGGCAGATAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3459 2657050 - 2657004 - R 80 -5.8 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAGCGCTTCCCCG AACGAA CCGGG-AGCCATGCGGGTTCA ATCATACACGGGAAG TERM 3460 2657079 - 2657059 - R 82 -13.3 -3.00298 | opp_overlap 2657053 GGGTTCAATCATACA CGGGAAGCG CGC CGCTTCCCA TCACGTTCTTATTTT gcpE 2658206 - 2657088 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase yfgA 2659237 - 2658233 - | putative DNA-binding protein TERM 3461 2658626 - 2658648 + g 70 -9 -3.64703 | overlap 2658627 2658638 2658639 TACCGTATTTTGCGT TGCCGCCGCC GTT GGCGCTGGCG TTTGCGTCGCCGCCG TERM 3462 2658638 - 2658696 + g 95 -14.5 -3.60627 | gap 2, opp_overlap 2658673, overlap 2658627 2658626 2658639 2658683 2658686 CGTTGCCGCCGCCGT TGGCGCTGGCGTTTGCGTCGCCGCCGTCG AAT CAAC--CGGCGTCGCAGGCGCCGGAGCCG TTTGCGCTGGCGTCG TERM 3463 2658639 - 2658695 + g 86 -15.8 -2.76162 | gap 2, opp_overlap 2658673, overlap 2658627 2658626 2658638 2658683 2658686 GTTGCCGCCGCCGTT GGCGCTGGCGTTTGCGTCGCCGCCGTCG AAT CAAC--CGGCGTCGCAGGCGCCGGAGCC GTTTGCGCTGGCGTC TERM 3464 2658691 - 2658673 - G 75 -11.6 -3.33696 | opp_overlap 2658639 2658638 2658683 2658686 CCGCCGTCGAATCAA CCGGCGTC GCA GGCGCCGG AGCCGTTTGCGCTGG TERM 3465 2659141 - 2659129 - G 70 -9.1 -3.66095 | AAACCTTCAGGCAAA GTCGC TCA GCGAC AGCCTGCTGGCTGAG yfgB 2660695 - 2659529 - | hypothetical protein TERM 3466 2660785 - 2660753 - R 85 -7 -5.04249 | gap 2, opp_overlap 2660752 2660749, overlap 2660755 GGTTGAAAAAAGAAA CGCC-CCGG-TAAGCA TAC TGCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2661333 - 2660902 - | Nucleoside diphosphate kinase SEN2507 2662317 - 2661454 - | putative polyferredoxin TERM 3467 2662237 - 2662207 - G 100 -13.3 -4.18018 | overlap 2662227 CTGCGCCAGCGAAAA CGCCTGCGCCG GACAAACAT CGGCGCAAGCG CGGCAGGAAGAAAAA TERM 3468 2662293 - 2662258 - G 85 -9.1 -4.43037 | gap 2 GGAAGAAAAACGAAA GCGAC-GACG-GACGCA AGCC TGCGTCACGTCTACCGC CGGATCGATCGTCAG SEN2508 2663126 - 2662317 - | putative anaerobic reductase component TERM 3469 2663008 - 2662986 - G 76 -9.1 -3.9712 | gap 1 GCAGGCCAGTACAAA CGCC-CCCGC CATC GCGGGAAGCG CGCCGCGTGCAGGCA SEN2509 2663748 - 2663119 - | putative anaerobic reductase component SEN2510 2666150 - 2663745 - | dimethyl sulfoxide reductase TERM 3470 2665634 - 2665611 - G 80 -9.4 -4.08767 | overlap 2665625 TTTATCGCCGGAAAA GGTGCCGCCG GAAA CGGCGGTGCC AACATGAACATAGCG TERM 3471 2666094 - 2666107 + g 86 -3.8 -5.36364 | overlap 2666075 AATAGCGGGCTGTTC GCCA TTTCCC TGGC TTTTTATATTTTTCA pbpC 2668594 - 2666279 - | penicillin-binding protein 1C TERM 3472 2666389 - 2666374 - G 78 -6.1 -4.70887 | TGAGTAATAAAGAAA GGCGA TTATTT TCGCC ATTAACAGGTTCGCC TERM 3473 2666442 - 2666414 - G 71 -4.5 -4.65895 | TTCGCCATTTAAAAA CCACCAGCGAC GCCCTTT ACCGCCGGTAG TCGAGACGGGCAGCG TERM 3474 2667851 - 2667823 - G 73 -5.1 -4.57569 | TCATTCGGGCAAAAA GCGGCGCCAGTTG CGG CATTTGACGCGGC GCCAGCCAGACCGGC TERM 3475 2668552 - 2668540 - G 100 -6.2 -5.50723 | opp_overlap 2668544, overlap 2668541 2668542 CCAGGAAAATAAAAA GCGG CGCGC CCGC CAGCCACAGCCAGCG SEN2512 2673529 - 2668595 - | putative lipoprotein TERM 3476 2668870 - 2668880 + g 70 -6.8 -4.11216 | overlap 2668850 2668849 TGGCGCTGCTGTCAG CCAG ATT CTGG TTTTCCAGCTCCAGC TERM 3477 2669577 - 2669590 + g 80 -9.5 -3.96148 | CAGATTTCGCGCAGC GCGCC GAGC GGCGC TTTCTGCTGACGCGC TERM 3478 2669887 - 2669899 + g 74 -4.7 -4.76041 | AGATGCCGATATCCA CCGCG GCG CGCCG TTTTTCATCGCTATC TERM 3479 2671563 - 2671573 + g 78 -2.4 -5.252 | opp_overlap 2671563 AGCCGCACCTGTAAA CCGG ACA CCGC TTTTTTCTCGCCCTG TERM 3480 2672057 - 2672067 + g 95 -8.2 -5.02074 | overlap 2672050 2672049 CACCTCATCCGCAGG CGCC AGC GGCG TTTTTTGCGCCGTCA TERM 3481 2673373 - 2673383 + g 75 -6.8 -4.45083 | overlap 2673365 CTTTGCCCTGGCTTT GCTG CGC CAGC TTTTGTAGCTGTGCC TERM 3482 2673861 - 2673890 + G 100 -8.5 -5.27779 | opp_overlap 2673843 2673863, overlap 2673850 2673863 2673864 GATATGGCGGGCGAA TATCGCGCCGG ACATATTC CCGGCGCGCTG TTTTTTGATATTGAA TERM 3483 2673863 - 2673888 + G 84 -8.9 -4.26398 | opp_overlap 2673843 2673863, overlap 2673850 2673861 2673864 TATGGCGGGCGAATA TCGCGCCGG ACATATTC CCGGCGCGC TGTTTTTTGATATTG TERM 3484 2673864 - 2673887 + G 76 -12.4 -3.14212 | opp_overlap 2673843 2673863, overlap 2673850 2673863 2673861 ATGGCGGGCGAATAT CGCGCCGG ACATATTC CCGGCGCG CTGTTTTTTGATATT TERM 3485 2674258 - 2674273 + G 77 -8.2 -4.11216 | opp_overlap 2674241 2674250 CGCAAATCGTTGACG CGCGTC CGGC GGCGCG TTTTAACGCTCAGGC sseA 2673738 - 2674580 + | putative thiosulfate sulfurtransferase SEN2514 2674826 - 2675494 + | hypothetical protein TERM 3486 2675622 - 2675582 - T 90 -15 -2.71263 | gap 1, opp_overlap 2675595, overlap 2675595 AATTCGGTTTAAGCA GGTCACAAAAAAACCGCTC AATT GAGCGGTTTTTTTGTG-CT GGTCCGGTTCGCGGC TERM 3487 2675610 - 2675595 - T 100 -10.4 -5.626 | opp_overlap 2675595, overlap 2675582 CAGGTCACAAAAAAA CCGCTC AATT GAGCGG TTTTTTTGTGCTGGT TERM 3488 2675595 - 2675610 + T 100 -10.4 -5.67967 | opp_overlap 2675595 2675582 CAGGTCACAAAAAAA CCGCTC AATT GAGCGG TTTTTTTGTGCTGGT TERM 3489 2675821 - 2675860 + T 76 -12.1 -2.57211 | opp_overlap 2675819 2675816, overlap 2675820 2675848 AGAGGATAACCCATG GCCGTAAGCGCAGGCAC ACCGTA GTGCCTGCTATCACGGC ATTATCGCCAGCGGT TERM 3490 2675848 - 2675890 + T 78 -12.1 -3.01712 | gap 1, opp_overlap 2675819 2675816, overlap 2675821 2675820 2675869 2675873 GGCACACCGTAGTGC CTGCTATCACGGCATTATCG CCAG CGGTGCTGCCGTGAT-GCGG TCTTCGCAAGGACCG TERM 3491 2676056 - 2676031 - T 70 -10.3 -2.55722 | opp_overlap 2676031 2676035 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3492 2676031 - 2676056 + T 100 -14.7 -4.66318 | opp_overlap 2676031, overlap 2676035 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3493 2676035 - 2676052 + T 100 -14.1 -4.87892 | opp_overlap 2676031, overlap 2676031 CAGGTAAGCCAGGAG GCCGCCC TGTT GGGCGGC TTTCTTTTCTTCAGA sseB 2676848 - 2676063 - | SseB protein TERM 3494 2676641 - 2676662 + g 75 -5.9 -4.60487 | gap 1, opp_overlap 2676644, overlap 2676640 2676645 GAGAAGTAAAGAAGG GAATGACGGT CGT GCCGTC-TTC TTTTTCCCAGTGCTG TERM 3495 2676645 - 2676659 + g 79 -7.8 -4.41633 | opp_overlap 2676644, overlap 2676640 2676641 AGTAAAGAAGGGAAT GACGGT CGT GCCGTC TTCTTTTTCCCAGTG TERM 3496 2676892 - 2676880 - R 70 -9.1 -3.30124 | opp_overlap 2676891 TTGTAGGCCTGATAA GACGC ACG GCGTC GCCATCAGGCAAAAT TERM 3497 2676891 - 2676919 + r 77 -10.9 -3.17075 | opp_overlap 2676880 2676907 2676908 ATAAGACGCACGGCG TCGCCATCAGGCA AAA TGCCGGGTGGCGC TTCGCTTACCCGGCC TERM 3498 2676934 - 2676907 - R 76 -7.6 -4.21194 | gap 1, opp_overlap 2676891, overlap 2676908 CGCCATCAGGCAAAA TGCCGGGT-GGCG CTT CGCTTACCCGGCC TACAAAAACACCGCT TERM 3499 2676933 - 2676908 - R 77 -11.1 -3.12395 | gap 1, opp_overlap 2676891, overlap 2676907 GCCATCAGGCAAAAT GCCGGGT-GGCG CTT CGCTTACCCGGC CTACAAAAACACCGC TERM 3500 2676958 - 2676943 - R 73 -4.6 -4.82901 | overlap 2676945 CCCGGCCTACAAAAA CACCGC TCAG GCGGTC AGCAAATTCGCGATG TERM 3501 2676956 - 2676945 - R 71 -7.2 -4.03995 | overlap 2676943 CGGCCTACAAAAACA CCGC TCAG GCGG TCAGCAAATTCGCGA pepB 2678232 - 2676949 - | Peptidase B TERM 3502 2677122 - 2677097 - G 83 -7.4 -4.53705 | opp_overlap 2677097 2677095, overlap 2677099 AAGTGCGACAGAAAA CCCGCGGCGG TGCTTG CCCCAGCGGG ATACGCCGCGCTGCC TERM 3503 2678248 - 2678283 + r 76 -7.4 -4.29396 | opp_overlap 2678255, overlap 2678250 2678251 2678255 TGTTATTTTCCTTAT TAGCAAACGGGCCGCC GTAG GGCAGCCCGTTAGATC TTTTGCTAAATGATT TERM 3504 2678250 - 2678281 + r 79 -10 -3.745 | opp_overlap 2678255, overlap 2678248 2678251 2678255 TTATTTTCCTTATTA GCAAACGGGCCGCC GTAG GGCAGCCCGTTAGA TCTTTTGCTAAATGA TERM 3505 2678251 - 2678280 + r 82 -13.5 -2.84218 | opp_overlap 2678255, overlap 2678250 2678248 2678255 TATTTTCCTTATTAG CAAACGGGCCGCC GTAG GGCAGCCCGTTAG ATCTTTTGCTAAATG TERM 3506 2678255 - 2678276 + r 86 -12.9 -3.29856 | opp_overlap 2678255, overlap 2678251 2678250 2678248 TTCCTTATTAGCAAA CGGGCCGCC GTAG GGCAGCCCG TTAGATCTTTTGCTA TERM 3507 2678276 - 2678255 - R 100 -15.1 -3.78775 | opp_overlap 2678255 2678251 2678250 2678248 TTCCTTATTAGCAAA CGGGCCGCC GTAG GGCAGCCCG TTAGATCTTTTGCTA yfhJ 2678610 - 2678410 - | hypothetical protein fdx 2678957 - 2678622 - | ferredoxin hscA 2680809 - 2678959 - | Chaperone protein hscA hscB 2681337 - 2680822 - | Co-chaperone protein hscB TERM 3508 2680906 - 2680924 + g 100 -16 -3.33315 | GCGCACCGTATCCGC CGCCGCGT CCC ACGCGGCG TTGTCCAACTGTTCC TERM 3509 2681079 - 2681068 - G 71 -7.2 -3.96148 | opp_overlap 2681070 TTGTTCCATCAGAAA CGCG GTGT CGCG TACCGTATGTTGCTC TERM 3510 2681395 - 2681369 - R 79 -8.7 -4.30719 | gap 1, opp_overlap 2681369 GCCTGTCAGAACAAA CCCCACACGCAG GCGA CCACG-GTGGGG TTATACCTTCTTACT yfhF 2681856 - 2681533 - | hypothetical protein nifU 2682271 - 2681885 - | NifU-like protein nifS 2683513 - 2682299 - | Cysteine desulfurase yfhP 2684188 - 2683694 - | hypothetical protein TERM 3511 2684211 - 2684223 + r 91 -6.2 -5.55769 | TTAACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA SEN2525 2685079 - 2684348 - | putative RNA methyltransferase TERM 3512 2684758 - 2684746 - G 70 -3.3 -4.77036 | overlap 2684747 2684749 GCTCACGACCAAAAA CCAGC GCA ACCGG CGTATTTGCCGCTTC TERM 3513 2685216 - 2685244 + G 72 -12.3 -2.69964 | overlap 2685211 CATCCGATGCTGACC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATGTAATTGCCAA suhB 2685198 - 2686001 + | extragenic suppressor protein SuhB TERM 3514 2686009 - 2686034 + F 95 -16.9 -2.74784 | overlap 2686006 2686005 AGCGCTAAGTCTCTT CGGCGGATGGG GCCA CTCATCCGCCG TGCCTTTTCAGGCGT TERM 3515 2686385 - 2686373 - g 70 -6.9 -4.09685 | opp_overlap 2686372 2686373 2686375 CGGCAGGCCGGAAAA CGCCG TCG CGACG GTGATTCATGTCCAT SEN2527 2686146 - 2687024 + | hypothetical protein TERM 3516 2687282 - 2687306 + G 95 -11.3 -4.57569 | GGCGCGTGTTTGCCC CGTCCGCAGAG TTT CGCGGCGGACG TTTTTCCGACACTGA TERM 3517 2688088 - 2688064 - g 71 -4.2 -4.56597 | gap 1, overlap 2688066 GGTTTTCGCGAAAAA CCCGGCGAGCG TCTG CGCT-ACCGCG CCCTGCATAAGGTCA asrA 2687206 - 2688249 + | anaerobic sulfite reductase subunit A TERM 3518 2688304 - 2688280 - g 74 -8.6 -3.96148 | gap 1 TCCTGTCATGATAAA CCGCAGCACAG TTTG CTGC-CTGCGG CGTACCGCATCCTCA asrB 2688253 - 2689071 + | anaerobic sulfite reductase subunit B TERM 3519 2689831 - 2689819 - g 93 -9.1 -4.77438 | overlap 2689821 2689822 ACGCACCAGTAAAAA GACGC CGC GCGTC GGCAAGCTCTTCCTC asrC 2689082 - 2690095 + | anaerobic sulfite reductase subunit C SEN2531 2691082 - 2690096 - | putative inner membrane protein SEN2532 2691711 - 2691073 - | hypothetical protein TERM 3520 2692188 - 2692172 - g 100 -10.1 -5.00616 | opp_overlap 2692181, overlap 2692181 2692184 CCCGGCCTTAAAAAA CGCGCTA AAG CAGCGCG GTATCGCGCGTCCGC TERM 3521 2692551 - 2692568 + G 74 -10.5 -3.53012 | CTGCGACTGGAGGTG GCGCGGC TGGT GCTGCGC TTTCGAGAAAAAGGG TERM 3522 2692986 - 2692974 - g 71 -4.7 -4.62783 | opp_overlap 2692985 CAGGCATTTCAAAAA GAGGG ATG CCCGC GCGGCGTAGCGCTGA csiE 2691837 - 2693114 + | stationary phase inducible protein CsiE hcaT 2694248 - 2693109 - | putative 3-phenylpropionate permease TERM 3523 2694379 - 2694341 - R 93 -12.5 -3.69621 | gap 1, opp_overlap 2694342 2694343, overlap 2694342 AGGGAGAAGTTCAAA CGGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCA-CG TTATGGCGCATAAGT TERM 3524 2694379 - 2694342 - R 79 -12.7 -2.81291 | opp_overlap 2694342 2694343, overlap 2694341 GGGAGAAGTTCAAAC GGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCACG TTATGGCGCATAAGT TERM 3525 2694343 - 2694378 + r 76 -11.8 -2.57931 | opp_overlap 2694341 2694342, overlap 2694342 GGAGAAGTTCAAACG GCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCAC GTTATGGCGCATAAG glyA 2695697 - 2694444 - | Serine hydroxymethyltransferase hmpA 2696022 - 2697212 + | flavohemoprotein (haemoglobin-like protein) TERM 3526 2697262 - 2697237 - f 83 -4.6 -5.40474 | opp_overlap 2697237, overlap 2697224 ATCCTCTGAAAAAAA GGGCGTTATC GTTAAG GCGAACGCCC GTTTTCCTCCCCGTT TERM 3527 2697875 - 2697861 - g 81 -7 -4.7657 | opp_overlap 2697861, overlap 2697854 TAAAAAGGCGAAAAA GCCGCG TAT CGCCGC TTTCTGGACGTGGGT TERM 3528 2698404 - 2698415 + G 72 -3.6 -4.82901 | opp_overlap 2698391, overlap 2698407 AACGCCGCAAAATAC CGCG CTGA TGCG TTTTTATGAGGCGCG cadC 2697394 - 2698938 + | transcriptional activator cadC TERM 3529 2698995 - 2698962 - f 73 -7.8 -4.02022 | gap 1, opp_overlap 2698962 2698967, overlap 2698967 CTGAACCATGACAAA TAAAAGCGAAAAGAT ATTAA AT-TTTTCGCTTTTA TTTTGTGAAGAACAT TERM 3530 2698962 - 2698995 + F 83 -9.1 -4.37092 | opp_overlap 2698962 2698967, overlap 2698967 CTGAACCATGACAAA TAAAAGCGAAAAGAT ATTA AATTTTTCGCTTTTA TTTTGTGAAGAACAT TERM 3531 2698967 - 2698990 + F 79 -4.6 -5.18371 | opp_overlap 2698967 2698962, overlap 2698962 CCATGACAAATAAAA GCGAAAAGAT ATTA AATTTTTCGC TTTTATTTTGTGAAG TERM 3532 2698990 - 2698967 - f 74 -3.3 -5.02323 | gap 1, opp_overlap 2698962 2698967, overlap 2698962 CCATGACAAATAAAA GCGAAAAGAT ATTAA AT-TTTTCGC TTTTATTTTGTGAAG TERM 3533 2699008 - 2699047 + F 100 -16 -3.14132 | opp_overlap 2699008 TTATTTTGTGAAGAA CATGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACATG TTCATCGCAAAGAAA TERM 3534 2699047 - 2699008 - f 93 -13.8 -3.62046 | opp_overlap 2699008 TTATTTTGTGAAGAA CATGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACATG TTCATCGCAAAGAAA TERM 3535 2699501 - 2699490 - g 83 -5.8 -4.8622 | opp_overlap 2699494 2699497 GCTGGCAACCAAAAA CCCT CAAC AGGG TGGCCCTATCGCTTA cadB 2699299 - 2700630 + | probable cadaverine/lysine antiporter cadA 2700713 - 2702857 + | lysine decarboxylase TERM 3536 2702896 - 2702858 - f 76 -8.3 -4.14543 | gap 1, opp_overlap 2702866, overlap 2702855 2702866 GAAAATACGAAATAA GT-ACCAAAGGGAAGTGG CTTG CCACTTCCCTTTTTTCAC GCAGCAAGGAGACTT TERM 3537 2702866 - 2702887 + F 100 -14.5 -5.00616 | opp_overlap 2702858 2702855 2702866 GAAATAAGTACCAAA GGGAAGTGG CTTG CCACTTCCC TTTTTTCACGCAGCA TERM 3538 2702887 - 2702866 - f 100 -14.5 -3.90738 | opp_overlap 2702866, overlap 2702858 2702855 GAAATAAGTACCAAA GGGAAGTGG CTTG CCACTTCCC TTTTTTCACGCAGCA yjdL 2702913 - 2704373 + | putative transmembrane transport protein glnB 2704760 - 2704422 - | nitrogen regulatory protein p-II yfhA 2706174 - 2704837 - | putative transcriptional regulator yfhG 2706935 - 2706171 - | hypothetical protein TERM 3539 2706533 - 2706556 + g 73 -5.2 -4.65895 | gap 1, overlap 2706536 2706538 CCAGACGGGTCACTA TGGCG-CGCCG CTC CGGCGGCGTAA TTTTTGCATCCGCCA TERM 3540 2706538 - 2706553 + g 78 -11.8 -3.26405 | overlap 2706536 2706533 CGGGTCACTATGGCG CGCCGC TCCG GCGGCG TAATTTTTGCATCCG yfhK 2708379 - 2706937 - | putative sensor kinase protein TERM 3541 2708326 - 2708314 - G 76 -5.5 -4.78107 | CAGGATCAGCAAAAA GGCCA GCA TGACC AATTGTCGTAAAGAA TERM 3542 2708456 - 2708426 - R 100 -17 -2.89742 | opp_overlap 2708429 2708433, overlap 2708429 2708433 GGGAAGCGCCAGATA CAACAAAGCCGGGC TAA ACCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3543 2708453 - 2708429 - R 100 -16.5 -3.5947 | opp_overlap 2708429 2708433, overlap 2708426 2708433 AAGCGCCAGATACAA CAAAGCCGGGC TAA ACCCGGCTTTG TTATGGAATAAGGCG TERM 3544 2708429 - 2708453 + r 100 -15.8 -3.32844 | opp_overlap 2708429 2708426 2708433, overlap 2708433 AAGCGCCAGATACAA CAAAGCCGGG CTAAA CCCGGCTTTG TTATGGAATAAGGCG TERM 3545 2708449 - 2708433 - R 95 -11.5 -4.42974 | opp_overlap 2708433 2708429, overlap 2708429 2708426 GCCAGATACAACAAA GCCGGGC TAA ACCCGGC TTTGTTATGGAATAA TERM 3546 2708433 - 2708449 + r 90 -10.8 -4.32177 | opp_overlap 2708429 2708426 2708433, overlap 2708429 GCCAGATACAACAAA GCCGGG CTAAA CCCGGC TTTGTTATGGAATAA TERM 3547 2708823 - 2708842 + r 71 -7.8 -3.92324 | overlap 2708815 2708824 ACCTATCCCCCACTC ATGTCGGG ATTT CCCGACAC TTTAATCTTGCGGCA TERM 3548 2708824 - 2708841 + r 75 -11.3 -2.95073 | overlap 2708815 2708823 CCTATCCCCCACTCA TGTCGGG ATTT CCCGACA CTTTAATCTTGCGGC purG 2712904 - 2709017 - | Phosphoribosylformylglycinamidine synthase TERM 3549 2713179 - 2713169 - g 78 -2.6 -5.1848 | opp_overlap 2713169 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG TERM 3550 2714433 - 2714423 - g 70 -3.2 -4.7629 | CTATTAAGCCAAAAA CCGT ATT ACAG TAAGTTAACCTACGG yfhD 2713160 - 2714704 + | hypothetical protein TERM 3551 2714762 - 2714790 + T 79 -9.4 -4.17132 | GCATTGCGCTATACT GCCGGCCCCGCG CCTTC CGCACGGTCGGC TTTCTTCAGGGCTTT yfhC 2715306 - 2714755 - | hypothetical protein TERM 3552 2714930 - 2714942 + g 95 -10.5 -4.65895 | opp_overlap 2714925 ACATCAATTAGCGAT CCGGC CGC GCCGG TTTTTGCATCGCGCG yfhB 2715966 - 2715331 - | hypothetical protein TERM 3553 2715950 - 2715940 - G 81 -2.4 -5.38497 | overlap 2715942 2715943 2715945 ATCCAAATCAAAAAA GACG ACA CGAC GCTCGTGGCTGACCA SEN2550 2717331 - 2715970 - | putative PTS system IIBC component TERM 3554 2716229 - 2716215 - G 71 -4.2 -4.62069 | GCGTGACGCCAAAAA TCAGCG GCT CGCCAA TCCCCAGCAGTCCGA SEN2551 2718235 - 2717342 - | putative phophosugar binding protein yfhH 2718351 - 2719199 + | putative transcriptional regulator TERM 3555 2719231 - 2719203 - T 100 -15.4 -4.0896 | opp_overlap 2719199 2719223 AAACTGGTTTGAAAA TGGCTCTTCCGC CTCAT GCAGAAGAGCCA TCAAGTTTATTGCGC SEN2553 2720104 - 2719238 - | putative oxidoreductase SEN2554 2721373 - 2720177 - | putative transmembrane transport protein TERM 3556 2721708 - 2721666 - g 75 -3.7 -4.85545 | opp_overlap 2721667 2721670, overlap 2721667 2721670 ATTAAATTAACAAAA GCAGGCATTATTTTG-CAACG ACA CGCTAACAAAATAATG-CTGG ATTTAAAAAATGCCG SEN2555 2721489 - 2722415 + | putative transcriptional regulator yfhL 2722453 - 2722713 + | putative ferredoxin acpS 2723205 - 2722825 - | Holo-[acyl-carrier-protein] synthase TERM 3557 2723081 - 2723063 - G 74 -6.6 -4.36914 | CGCTTGGCGAGAAAA CGCACCGG CTG CTGATGCG TCTCCCAGATAGCCC pdxJ 2723936 - 2723205 - | Pyridoxal phosphate biosynthetic protein pdxJ TERM 3558 2723404 - 2723426 + g 90 -10.5 -4.28254 | overlap 2723406 GCCGCCAGGGTCGCG GCGCTGGCG ATACG CGCCAGCTC TTTTGCCTGTTCCGC TERM 3559 2723406 - 2723424 + g 83 -11.7 -3.741 | overlap 2723404 CGCCAGGGTCGCGGC GCTGGCG ATACG CGCCAGC TCTTTTGCCTGTTCC recO 2724676 - 2723948 - | DNA repair protein recO TERM 3560 2723989 - 2724006 + g 78 -6.9 -4.66264 | opp_overlap 2723988 2723987 GTTTGGGCATAAATT GCCGGAA CAGC TCCCGGC TTTTTAACGGTTTTC SEN2560 2725593 - 2724688 - | GTP-binding protein rnc 2726270 - 2725590 - | Ribonuclease III TERM 3561 2725947 - 2725963 + g 75 -3.5 -4.8622 | opp_overlap 2725941, overlap 2725948 CGCCAGAATGGACTC TCGACGG AAT CCGCCGC TTTTTAATTCGCCCG TERM 3562 2726491 - 2726529 + r 75 -11.1 -2.96873 | gap 1, opp_overlap 2726494, overlap 2726488 AATTTATCCAGGAAA TAATTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAACGA TCATTTCATCACAGT TERM 3563 2726526 - 2726494 - R 100 -17.2 -4.015 | gap 1, opp_overlap 2726491 2726488 TTATCCAGGAAATAA TTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAA CGATCATTTCATCAC lepB 2727518 - 2726544 - | signal peptidase I lepA 2729334 - 2727535 - | GTP-binding protein LepA TERM 3564 2727631 - 2727645 + g 85 -2.1 -5.45652 | TTTCTTACCTTCTTT CTGTT TCTGC AGCAG TTTTTTCTTACGACT rseC 2730064 - 2729585 - | sigma-E factor regulatory protein RseC TERM 3565 2729808 - 2729798 - G 73 -5.4 -4.55295 | overlap 2729800 CGCCGCACAAAGAAA TAGC CCC GCTA AAGGCGACATATAGA rseB 2731017 - 2730061 - | sigma-E factor regulatory protein RseB precursor TERM 3566 2730931 - 2730958 + g 74 -9.7 -3.72576 | opp_overlap 2730931 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTGCTGAGAAGAAC TERM 3567 2730958 - 2730931 - G 83 -11.9 -3.61715 | opp_overlap 2730931 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTGCTGAGAAGAAC rseA 2731667 - 2731017 - | sigma-E factor negative regulatory protein TERM 3568 2731368 - 2731388 + g 76 -3.2 -5.00616 | gap 1, overlap 2731369 GCCCATTTGGGTAAG CTGCG-CCG CCCA CGGACGCAC TTTTTTCCAGAACGG rpoE 2732274 - 2731699 - | RNA polymerase sigma-E factor (sigma-24) TERM 3569 2732372 - 2732392 + H 73 -2.5 -5.1502 | overlap 2732374 TTGGAGTGTCTATGT TTCGTAAAG TTC CGTTACGCA TTTGTTTTTGTTTGT TERM 3570 2732847 - 2732867 + G 70 -8.9 -3.72576 | overlap 2732844 2732850 TCCACGTTTTATGCG CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACCGAC TERM 3571 2734217 - 2734248 + G 72 -12.4 -2.59431 | gap 1, opp_overlap 2734226, overlap 2734213 GCGTTGCGCGATGAT GCGTAAAGAG-AGCC GGG GGCTGCACTTTACGC TGGATTATCCGCAAC nadB 2732700 - 2734322 + | L-aspartate oxidase yfiC 2735044 - 2734307 - | hypothetical protein TERM 3572 2734418 - 2734400 - G 75 -11.7 -2.90496 | overlap 2734397 TCTGTCGCTAAAGCA CTCCCCG GCTTG CGGGGAG AATGCGAGCAAAACC TERM 3573 2735080 - 2735067 - H 100 -9.5 -5.03145 | CAACCTTGCAAAAAA CGGCG ACAG CGCCG AGTGAAAACAATACC TERM 3574 2735356 - 2735337 - g 80 -9.2 -4.11692 | CAGGCACCGGTAAAA CGGCGGCA TATC TGCTGCCG GCGTTGCAGCACCTG srmB 2735174 - 2736508 + | ATP-dependent RNA helicase SrmB TERM 3575 2736515 - 2736536 + T 100 -14.5 -5.80817 | opp_overlap 2736515 GAAGAGTGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTTATCTTCCA TERM 3576 2736536 - 2736515 - T 93 -14.5 -3.44206 | opp_overlap 2736515 GAAGAGTGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTTATCTTCCA yfiE 2737425 - 2736526 - | LysR-family transcriptional regulator yfiK 2737528 - 2738115 + | hypothetical protein TERM 3577 2738092 - 2738104 + T 77 -3.3 -5.14563 | overlap 2738091 TTACTGCTGGTGTAC TGCGC GGT GCGGA TTTTTTACTGACCCA TERM 3578 2738132 - 2738156 + T 100 -14.3 -3.94877 | opp_overlap 2738132 CCAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT TERM 3579 2738156 - 2738132 - T 100 -16.5 -5.34857 | opp_overlap 2738132 CCAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT yfiD 2738560 - 2738177 - | hypothetical protein TERM 3580 2739452 - 2739466 + G 91 -7.8 -5.1287 | CATCCCTCGCCACTC TCTGCG CAC CGCGGA TTTTTTGGCTGTAAC ung 2738879 - 2739568 + | Uracil-DNA glycosylase TERM 3581 2739572 - 2739584 + T 74 -6.9 -4.37092 | overlap 2739573 GAGAGTGAATAACGT TGGCG GCT CGCCG TTTTATCGCCCGGAT TERM 3582 2739678 - 2739647 - T 75 -10 -3.61404 | gap 1, opp_overlap 2739651, overlap 2739648 GTAGGAAGTACATAA TCGGCCCGGCG-CGC GTT GCGTCACCGGGCTGC AGCCCTTACGCTTTA TERM 3583 2739677 - 2739648 - T 82 -13.5 -2.76361 | gap 1, opp_overlap 2739651, overlap 2739647 TAGGAAGTACATAAT CGGCCCGGCG-CGC GTT GCGTCACCGGGCTG CAGCCCTTACGCTTT yfiF 2740721 - 2739684 - | putative RNA methyltransferase TERM 3584 2740160 - 2740182 + g 100 -10.6 -4.72272 | CCTGCTTTACCCATT GCTTAACGGT CGT ACCGTTACGC TTTTTAATCAGGAAA TERM 3585 2740368 - 2740380 + g 80 -9.1 -4.11216 | opp_overlap 2740367 ACGGCTCTGGAATAG CGCCT GGC AGGCG TTTTCACCGTAGACG TERM 3586 2740487 - 2740525 + g 93 -13.1 -4.00934 | gap 1 CTTTCTCAGGCGTTT CATCGCC-TGGCGCGCGG GACA CGGTGCGCCACGGCGAAG TTTCATGTTTACGGT TERM 3587 2740898 - 2740878 - H 87 -10.4 -4.13591 | opp_overlap 2740878 2740897 GTAACATTATAGAAA CATCCCGC GCGTA GCGGGACG TCTTCCGACGTATTC trxC 2740925 - 2741344 + | thioredoxin 2 TERM 3588 2741351 - 2741371 + F 100 -14.7 -4.16943 | opp_overlap 2741346 2741347, overlap 2741345 GCGCTGTAAACGCCA CGGGGCGCA TCT TGTGCCCCG TTTTCACCTCTGCCA TERM 3589 2741556 - 2741577 + G 76 -2.9 -5.01497 | overlap 2741563 2741568 TGTGTGATACGTTAA CGCCTTCTC AGGC GAAAAGCCG TTTTTGTCTGGTCAT yfiP 2741417 - 2742097 + | hypothetical protein TERM 3590 2742872 - 2742854 - g 81 -8 -4.25104 | TTCTGGTGATTAAAA GCGGCCGA AGC CCGGCAGC CCAGCGTTTACTTAA yfiQ 2742151 - 2744811 + | putative acyl-CoA synthetase TERM 3591 2745067 - 2745056 - g 71 -5.8 -4.3739 | opp_overlap 2745057, overlap 2745043 2745057 CACTGCTGGAGAAAA TCGC CAGC GCGA CGCAGCGTATTTGTA pssA 2744926 - 2746281 + | CDP-diacylglycerol-serine O-phosphatidyltransferase TERM 3592 2746288 - 2746304 + F 89 -9.4 -4.66938 | opp_overlap 2746287 ATCCTGTAATCGAAG CCCCGT CCTGT ACGGGG TTTTCTCTTAGGAGT yfiM 2746326 - 2746649 + | hypothetical protein kgtP 2747947 - 2746646 - | alpha-ketoglutarate permease TERM 3593 2747748 - 2747730 - G 90 -5.8 -5.14563 | opp_overlap 2747731, overlap 2747731 2747732 GGCCGCATTAAAAAA CCGGCGGC AAA GACGCCTG CCGTTTGCAAAAGCT TERM 3594 2747967 - 2747979 + r 72 -2.6 -5.08255 | overlap 2747956 TTCTCCTTGTTGCCA GGCT TAATC GGCC TTTTATTTTGGAGAT SEN2582 2748506 - 2748051 - | hypothetical protein TERM 3595 2748667 - 2748708 + r 95 -13.1 -3.76224 | opp_overlap 2748672 2748677, overlap 2748672 2748677 CCGGCAGAAACAGAC AAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA TTTGATGCCTGGCAG TERM 3596 2748672 - 2748703 + r 100 -13 -4.9448 | opp_overlap 2748672 2748677, overlap 2748667 2748677 AGAAACAGACAAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 3597 2748703 - 2748672 - R 100 -17.4 -5.1634 | opp_overlap 2748672 2748667 2748677, overlap 2748677 AGAAACAGACAAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 3598 2748677 - 2748698 + r 93 -15.9 -2.91914 | opp_overlap 2748677 2748672, overlap 2748672 2748667 CAGACAAAAACAAAA GGCCCTGTC TTCC GACAGGGCC CTTCGTTTTATTTGA TERM 3599 2748698 - 2748677 - R 100 -15.9 -5.38839 | opp_overlap 2748672 2748667 2748677, overlap 2748672 CAGACAAAAACAAAA GGCCCTGTC TTCC GACAGGGCC CTTCGTTTTATTTGA TERM 3600 2751439 - 2751451 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3601 2752092 - 2752057 - R 77 -9.2 -4.00532 | opp_overlap 2752059 2752068 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA TTAAGGCAGGTGACT TERM 3602 2754005 - 2754030 + r 72 -4.7 -4.65895 | gap 1, overlap 2753999 2754011 ACAGCTCACCGTCGC GAGGTG-GCGTA TAT TACGCTTTCCTC TTTTTGAGTCAAGCC TERM 3603 2754011 - 2754023 + r 73 -7.7 -4.13748 | overlap 2753999 2754005 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTTTGAG TERM 3604 2754067 - 2754083 + r 71 -8 -3.85698 | TTCGCTTTCCTCACA GGCTTC TTAAC GAAGCC TTTCTGACCCGGCGG TERM 3605 2754249 - 2754266 + r 84 -8.3 -4.6971 | opp_overlap 2754249 GTTTTTAAACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG TERM 3606 2754266 - 2754249 - R 100 -10.5 -5.27335 | opp_overlap 2754249 GTTTTTAAACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG clpB 2756859 - 2754286 - | ClpB protein (heat shock protein f84.1) TERM 3607 2755314 - 2755326 + g 73 -5.5 -4.59773 | overlap 2755313 CTTCCGACTGGGTCG CGGCT TCC AGCTG TTTTTCCAGCTCCGG TERM 3608 2756055 - 2756035 - G 74 -7.5 -4.1552 | opp_overlap 2756035 CAGCTCGTCAATAAA CAGGATGAC GTT GCCTTCCTG TTTCGCCAGATCGTT yfiH 2757720 - 2756989 - | hypothetical protein TERM 3609 2757193 - 2757175 - G 71 -4.5 -4.56597 | opp_overlap 2757175 CCCGTGCGGCAAAAA TGCGCTA TCGGC TTGCGCA TCTTTTGCTAAAAAT TERM 3610 2757218 - 2757208 - G 78 -6.8 -4.56775 | ATCTTTTGCTAAAAA TGCG TCA CGCA CTTCCGGCCCCACTT rluD 2758697 - 2757717 - | ftsH suppressor protein SfhB TERM 3611 2757772 - 2757754 - G 70 -6.6 -4.12188 | opp_overlap 2757771 TTATGATCTTCAAAA TCGGCGCG CAT CGCATCGA TAAGGTCCACCATAT TERM 3612 2758729 - 2758739 + H 74 -8.2 -3.8766 | TAACGTTGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC yfiO 2758829 - 2759566 + | putative lipoprotein TERM 3613 2759611 - 2759582 - f 93 -15.1 -2.8917 | opp_overlap 2759587, overlap 2759587 AGCAATACCAACAAG CAAAACGGCAGCC TTCC GGCTGCCGTTTTT TTATTCGATATCTGA TERM 3614 2759587 - 2759606 + F 100 -15 -5.8187 | opp_overlap 2759587 2759582 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3615 2759606 - 2759587 - f 100 -15 -4.5774 | opp_overlap 2759587, overlap 2759582 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3616 2759774 - 2759759 - f 72 -6.2 -4.35693 | opp_overlap 2759758 AAAGTGACAAAATAA TGTGAT TTAC ATCACA CATTTTGACATTAAG yfiA 2759838 - 2760176 + | putative sigma(54) modulation protein TERM 3617 2760202 - 2760217 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGG TERM 3618 2760396 - 2760376 - f 100 -14 -4.03167 | opp_overlap 2760376 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3619 2760376 - 2760396 + F 100 -14 -5.5112 | opp_overlap 2760376 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3620 2761173 - 2761147 - g 71 -4.3 -4.67353 | overlap 2761149 2761161 2761162 GCAGCGATGGAAAAA GTCGCGCAG GCAAACTCT CCGCGCGTC GCGGCGCTCGGCAGC pheA 2760427 - 2761587 + | chorismate mutase-P/prephenate dehydratase SEN2589 2762456 - 2761548 - | hypothetical protein TERM 3621 2761757 - 2761773 + g 76 -12.3 -3.0497 | opp_overlap 2761757 2761756 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3622 2761773 - 2761757 - G 72 -12.3 -2.57564 | opp_overlap 2761757, overlap 2761756 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3623 2762282 - 2762259 - G 77 -7.4 -4.31433 | overlap 2762261 CATGGCCACAATAAA TCCGCCCTGC TCAC GCAAGGCAAA ACAGCCCACCTCTTC TERM 3624 2762493 - 2762479 - R 100 -11.4 -5.37593 | opp_overlap 2762479 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT TERM 3625 2762479 - 2762493 + r 91 -11.4 -4.36262 | opp_overlap 2762479 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT tyrA 2763581 - 2762514 - | chorismate mutase/prephenate dehydrogenase aroF 2764715 - 2763645 - | phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive TERM 3626 2764569 - 2764551 - G 71 -10.2 -3.24925 | ACCGCATACCACCAA CAGACGCG GAT CGCGCCCG GCAATAATGTCAGAA TERM 3627 2764925 - 2764939 + H 83 -4.2 -5.43514 | opp_overlap 2764925 2764924 2764927, overlap 2764924 2764927 GAAAAACGGTAAAAT GAGCGA TGC TCGCTA TTTTTTGATTATTTT TERM 3628 2764927 - 2764937 + H 74 -6.8 -4.30543 | opp_overlap 2764925 2764924 2764927, overlap 2764924 2764925 AAAACGGTAAAATGA GCGA TGC TCGC TATTTTTTGATTATT yfiR 2765155 - 2765673 + | hypothetical protein yfiN 2765666 - 2766886 + | hypothetical protein TERM 3629 2766977 - 2767005 + T 70 -5.1 -4.39002 | opp_overlap 2766968 2766980, overlap 2766980 GAGCAACCCCATAAA AAAGGGGCCAGCG TAA TGCCAGCCCCTTC TTTTCTACAAGCTTT TERM 3630 2766980 - 2767002 + T 74 -6.8 -4.30995 | opp_overlap 2766968 2766980, overlap 2766977 CAACCCCATAAAAAA GGGGCCAGCG TAA TGCCAGCCCC TTCTTTTCTACAAGC TERM 3631 2767002 - 2766980 - T 100 -10.5 -5.27923 | opp_overlap 2766977 2766980, overlap 2766968 CAACCCCATAAAAAA GGGGCCAGC GTAAT GCCAGCCCC TTCTTTTCTACAAGC rplS 2767390 - 2767043 - | 50S ribosomal subunit protein L19 trmD 2768198 - 2767431 - | tRNA(guanine-N1)methyltransferase rimM 2768791 - 2768243 - | 16S rRNA processing protein rpsP 2769058 - 2768810 - | 30S ribosomal subunit protein S16 TERM 3632 2769114 - 2769082 - R 84 -8.4 -4.63218 | gap 1, overlap 2769085 CTTGTGTGAATAAAA CAACCGGGCCCCATC GAGG AACGGAGCCCGGC-G TCATATTAAAAGCCC TERM 3633 2769112 - 2769085 - R 100 -13.4 -4.43307 | overlap 2769082 GTGTGAATAAAACAA CCGGGCCCCATC GAGG AACGGAGCCCGG CGTCATATTAAAAGC ffh 2770672 - 2769311 - | signal recognition particle protein corE 2770838 - 2771629 + | hypothetical protein TERM 3634 2771821 - 2771811 - g 75 -4 -4.86033 | AAACGGGTAGAAAAA TTAC TGC GTAA ACCCGACCGACTGAT TERM 3635 2772714 - 2772683 - g 74 -7.2 -4.09685 | overlap 2772684 2772686 GGTCACGCCGCAAAA CGACGGTTCGGTCA TTAT TGACGGTACCGCCA ACGTCCGGGAAATCA yfjD 2771736 - 2772935 + | hypothetical protein TERM 3636 2772942 - 2772959 + F 100 -11.3 -5.252 | opp_overlap 2772942 2772941 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC TERM 3637 2772959 - 2772942 - f 74 -11.3 -2.82449 | opp_overlap 2772942, overlap 2772941 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC SEN2601 2773056 - 2773661 + | hypothetical protein TERM 3638 2773687 - 2773667 - T 100 -9 -5.53288 | TTTAAGCTAAAAAAA TGGCCGAC TTTAC ATCGGCCA TCAGACTTTTACTTC grpE 2774286 - 2773696 - | heat shock protein GrpE (heat shock protein b25.3) (hsp24) TERM 3639 2774114 - 2774156 + g 79 -2.7 -5.14563 | gap 1, overlap 2774116 AACACGGTGTCGCGT TCGCGAGTCTGG-GCTTCTG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG TERM 3640 2774252 - 2774264 + g 72 -2.6 -4.84673 | overlap 2774241 ATTTCTTCCGGGGCT TGCC CCTCA GGCG TTTTCTGTTCTTTAC TERM 3641 2774577 - 2774562 - g 80 -4.6 -5.13473 | overlap 2774563 ATTACAGCTAAAAAA TGTGCC AACC GGCACG CTGGCGGAAATTGGT yfjB 2774410 - 2775288 + | hypothetical protein TERM 3642 2775932 - 2775920 - g 71 -10.5 -3.27617 | CAACAAAGCCAGGAA CGCGC CGC GCGCG CAGAACTGCTGCAAT TERM 3643 2776314 - 2776299 - g 79 -7.6 -4.42806 | GCATCGCTAAACAAA TTTCGC TGGC GCGAAA ACATCACGTCAGCCC recN 2775374 - 2777035 + | DNA repair protein smpA 2777184 - 2777522 + | small protein A yfjF 2777978 - 2777688 - | hypothetical protein TERM 3644 2777811 - 2777822 + g 77 -4.4 -4.85782 | TTTTACCGGACGACT GTAG ATAC CTAC TTTATTTTTCGCCAG yfjG 2778444 - 2777968 - | hypothetical protein smpB 2778594 - 2779076 + | SsrA (tmRNA)-binding protein TERM 3645 2779089 - 2779119 + F 71 -9.8 -3.23492 | overlap 2779087 2779090 TAATAGACATTTTTT GTGACCAGCTTC TCAGTAT GAAGCTGGTCAA TGTTCATATCTCATG TERM 3646 2779090 - 2779118 + F 80 -13.3 -2.53613 | overlap 2779089 2779087 AATAGACATTTTTTG TGACCAGCTTC TCAGTAT GAAGCTGGTCA ATGTTCATATCTCAT TERM 3647 2779277 - 2779299 + F 74 -3.5 -5.0916 | opp_overlap 2779282, overlap 2779280 AAATTTAATATTGCT GAATACCTT CACAA AAGGTATTG TTTTTATGTTAAAAA TERM 3648 2779280 - 2779296 + F 72 -5.2 -4.63863 | opp_overlap 2779282, overlap 2779277 TTTAATATTGCTGAA TACCTT CACAA AAGGTA TTGTTTTTATGTTAA TERM 3649 2780068 - 2780101 + G 72 -11 -3.01712 | overlap 2780080 GTGGGTACTGGCTGG CGCGGTGGCGGC TGGCGGCATT GCCGCTATCGCG TCTTCCGGCGGCGGC TERM 3650 2781467 - 2781457 - g 78 -6.8 -4.56597 | CGGGCTGCTGAAAAA TGGC GAT GCCA CAGATGATAACCGCC TERM 3651 2781973 - 2781957 - g 71 -5.7 -4.37092 | overlap 2781959 ACGCGCCGGATAAAA CTGCGCC TGC GGCACCG GACGGTCTTACCGTG TERM 3652 2782199 - 2782174 - g 71 -4.7 -4.57569 | gap 1, opp_overlap 2782180, overlap 2782132 2782179 2782180 2782181 CGATGTCGCGAAAAA CGA-AAGCGCCG CCG CGACGGTTATCG CGCCGGACAGTACCG TERM 3653 2782920 - 2782882 - g 74 -11 -3.27774 | opp_overlap 2782889, overlap 2782912 CACGCCAACGATTAA TGGTACAGGTGAACCGGG TTC CACAGTACACCTGTATCA GAATGGCGCCCGGAT TERM 3654 2783654 - 2783629 - g 74 -10.5 -3.61268 | gap 1, overlap 2783632 GAGCGAAGGGTTAAA CATCC-TGACGG CCA CCGCCACGGATG CCGCAGGCAATAGTA TERM 3655 2785799 - 2785785 - g 76 -12.8 -2.73875 | overlap 2785782 CGGCGGGCAATACCA GCGCGG TCT CCGCGC CGTGGACGATCGTGG TERM 3656 2789090 - 2789062 - g 87 -13.2 -3.21416 | gap 1 CACCGCCATCACCAA CGCCAA-CGGCGT CAGT ACGCCGGTCGGCG CGGGCGGCGTGGATA TERM 3657 2789936 - 2789923 - g 74 -9.5 -3.64487 | CTACACGCTGAAGAA CGGCG TCGG CGCCG ACAGCATTAAAACGC TERM 3658 2790839 - 2790826 - g 75 -6.7 -4.46615 | CAGTACCAACCAAAA CGATG TTCT CATCG GCTCCGCCTATGGCG SEN2609 2779691 - 2791165 + | large repetitive protein TERM 3659 2791198 - 2791173 - f 100 -16.9 -5.24129 | GCGGTTGATAAAAAA GCCCCGAACGC CACG ACGTTCGGGGC AACAAGCGGTGATAT SEN2610 2791230 - 2792639 + | putative type I secretion protein TERM 3660 2793637 - 2793617 - g 100 -7.5 -5.78622 | GCACTGCAAAAAAAA CTGGCTGTC CTC GCCAACCAG GCCGCCCACGAAGCG TERM 3661 2793716 - 2793727 + G 74 -7.2 -4.16016 | opp_overlap 2793707 2793724 ATTAAACTGATGCAG GCGG AGAA CCGC TTTCTTCAGCAGTGG SEN2611 2792636 - 2794816 + | putative type I secretion protein, ATP-binding protein SEN2612 2794824 - 2795987 + | putative type I secretion protein TERM 3662 2796159 - 2796144 - f 79 -3.2 -5.4477 | overlap 2796146 AAAGCCGCAAAAAAA TAGTCG CAAA CGACGA AACCTACGCTTTAGC TERM 3663 2796461 - 2796426 - f 82 -12 -3.45324 | opp_overlap 2796432, overlap 2796432 CAGCTCCACCAAATA TAACAAGGGGTTACGT GAAA ACGTAGCCCCTTTTTA ATGTCCAGTGTCCAC TERM 3664 2796455 - 2796432 - f 89 -11 -4.05193 | opp_overlap 2796432, overlap 2796426 CACCAAATATAACAA GGGGTTACGT GAAA ACGTAGCCCC TTTTTAATGTCCAGT TERM 3665 2796432 - 2796455 + F 100 -13.2 -4.80882 | opp_overlap 2796426 2796432 CACCAAATATAACAA GGGGTTACGT GAAA ACGTAGCCCC TTTTTAATGTCCAGT SEN2613 2796519 - 2797112 + | membrane protein TERM 3666 2797148 - 2797104 - f 81 -12.5 -3.25073 | overlap 2797085 2797083 2797102 GCCGCAACAGCAACA GACTC-CTAGCTTTGCATAGC TGCCC GCTATGCAAA-CTAGTGAGCC AAATAAATTTAGACT TERM 3667 2797348 - 2797371 + F 71 -7.4 -3.91897 | opp_overlap 2797354, overlap 2797349 CTCCACGGGAGCTCA TGCAAACCCG TGCG CGGATTTGCG TTTCTGGCTAGCCAA SEN2614 2797511 - 2798314 + | hypothetical protein TERM 3668 2798862 - 2798833 - T 100 -10.7 -4.93877 | opp_overlap 2798836, overlap 2798836 CGCCAGCAAATAAAA CAAGGGGCAACGT GAAA ACGTAGCCCCTTT TTGTTGTCTATGGAA TERM 3669 2798859 - 2798836 - T 100 -12.4 -4.56436 | opp_overlap 2798836, overlap 2798833 CAGCAAATAAAACAA GGGGCAACGT GAAA ACGTAGCCCC TTTTTGTTGTCTATG TERM 3670 2798836 - 2798859 + T 100 -12.4 -5.27206 | opp_overlap 2798833 2798836 CAGCAAATAAAACAA GGGGCAACGT GAAA ACGTAGCCCC TTTTTGTTGTCTATG TERM 3671 2798898 - 2798880 - T 100 -16 -4.18018 | opp_overlap 2798870 GTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC SEN2616 2800221 - 2799110 - | putative transposase TERM 3672 2800759 - 2800783 + H 90 -9.9 -4.4458 | opp_overlap 2800762, overlap 2800761 2800762 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGTCTATGTC TERM 3673 2800761 - 2800781 + H 93 -12.5 -3.8147 | opp_overlap 2800762, overlap 2800759 2800762 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGTCTATG TERM 3674 2800762 - 2800780 + H 93 -16 -2.87798 | opp_overlap 2800762, overlap 2800761 2800759 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTCTAT TERM 3675 2800780 - 2800762 - H 100 -16 -4.91109 | opp_overlap 2800762 2800761 2800759 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTCTAT TERM 3676 2801201 - 2801191 - H 86 -4 -5.52384 | opp_overlap 2801200 TTTTTATGAAAAAAA TCAT CAC ATGA TCAAGGGTCGTATTT iroB 2801306 - 2802421 + | putative glycosyltransferase iroC 2802502 - 2806158 + | putative ABC transporter protein TERM 3677 2806197 - 2806219 + F 95 -13.5 -3.77831 | opp_overlap 2806189 2806191 2806190 AAAGAAAGCCCGCAA GCGGCTGTT CCTGT AACAGCCGC TTTAGCTATTAGTAC iroD 2806268 - 2807512 + | ferric enterochelin esterase TERM 3678 2807574 - 2807588 + G 74 -4.2 -4.79667 | overlap 2807570 2807584 TACCACAACAAGTGC TATCGC ATG GCGCTA TTTTTAGTGAGTTTT TERM 3679 2808380 - 2808398 + G 74 -10.2 -3.58731 | overlap 2808382 GCAGCATTACCCGGG CCTGGGCC ACG GGCCCATG TTTAACGCCTCTTTT TERM 3680 2808382 - 2808396 + G 75 -11.4 -3.36341 | overlap 2808380 AGCATTACCCGGGCC TGGGCC ACG GGCCCA TGTTTAACGCCTCTT iroE 2807544 - 2808473 + | hypothetical protein TERM 3681 2808509 - 2808487 - T 86 -14.2 -3.29043 | overlap 2808474 AACCCGCCGCCAGAA TATGCCCGCC AGC GACGGGCATA ATCCATCAAAACGAG iroN 2810695 - 2808515 - | TonB-dependent outer membrane siderophore receptor protein TERM 3682 2808733 - 2808748 + g 74 -3.2 -4.87291 | overlap 2808726 CTTCACTACGCGACT CCGC ATGTGTTC GCGG TTTTTGCTTGCCGTA TERM 3683 2811208 - 2811172 - R 100 -17.5 -4.07687 | opp_overlap 2811178, overlap 2811174 2811178 ATGTTGGCGCCAAAA TACAAAGCGCCTGGTAA TAT TTATCAGGCGCTTTGCA GACAGAAAACCATCA TERM 3684 2811206 - 2811174 - R 100 -17.9 -3.63744 | opp_overlap 2811178, overlap 2811172 2811178 GTTGGCGCCAAAATA CAAAGCGCCTGGTAA TAT TTATCAGGCGCTTTG CAGACAGAAAACCAT TERM 3685 2811202 - 2811178 - R 100 -12.9 -4.45168 | opp_overlap 2811178, overlap 2811174 2811172 GCGCCAAAATACAAA GCGCCTGGTAA TAT TTATCAGGCGC TTTGCAGACAGAAAA TERM 3686 2811178 - 2811202 + r 100 -15.1 -3.53012 | opp_overlap 2811174 2811172 2811178 GCGCCAAAATACAAA GCGCCTGGTAA TAT TTATCAGGCGC TTTGCAGACAGAAAA TERM 3687 2811660 - 2811681 + r 71 -7.3 -4.10566 | opp_overlap 2811657, overlap 2811675 GTAAATAATTTACTC TCAGCTACT ATTC AGTAGCAGA TTGTTATTCTTACAT SEN2624 2812780 - 2811728 - | exported protein TERM 3688 2812528 - 2812544 + g 71 -5.9 -4.36914 | overlap 2812530 CACGACACCCATCCA TATCATC CAG GATGATG TTTTCTGGCAACGGA TERM 3689 2813656 - 2813637 - g 77 -3.5 -5.13016 | overlap 2813639 AAGTAAAATTAAAAA GATCCTC CTGTCC GAGGAAC AAATCTTGCTCGCTC virK 2813299 - 2814228 + | virulence protein TERM 3690 2815257 - 2815241 - g 72 -2.3 -4.8622 | TGGTGCAATTAAAAA TGAGT TCAGACC ACTCA GTCCCGGCAGCATAC mig-14 2814522 - 2815418 + | putative transcriptional regulator TERM 3691 2815458 - 2815426 - T 88 -8.5 -4.85782 | opp_overlap 2815427 2815428, overlap 2815427 2815428 TTTGCTAAAAAGAAA GCCTGGACGTAAATA TGT TTTTTACGTCCAGAT TTTTCATAAGTCCTG TERM 3692 2815457 - 2815427 - T 86 -12 -3.50746 | opp_overlap 2815427 2815428, overlap 2815426 2815428 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGTCCAGA TTTTTCATAAGTCCT TERM 3693 2815427 - 2815457 + T 100 -9.8 -4.75372 | opp_overlap 2815427 2815426 2815428, overlap 2815428 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGTCCAGA TTTTTCATAAGTCCT TERM 3694 2815428 - 2815456 + T 86 -13.3 -3.445 | opp_overlap 2815428 2815427 2815426, overlap 2815427 TGCTAAAAAGAAAGC CTGGACGTAAATA TGT TTTTTACGTCCAG ATTTTTCATAAGTCC TERM 3695 2815456 - 2815428 - T 81 -13.3 -2.69725 | opp_overlap 2815427 2815428, overlap 2815427 2815426 TGCTAAAAAGAAAGC CTGGACGTAAATA TGT TTTTTACGTCCAG ATTTTTCATAAGTCC nxiA 2817153 - 2816140 - | putative cation transporter TERM 3696 2816793 - 2816783 - G 87 -2.4 -5.67063 | GCCAGCAGAAAAAAA GCGG AAA CAGC CGTACCAATCAACGA TERM 3697 2816933 - 2816914 - G 93 -4.2 -5.64006 | opp_overlap 2816922 ACCCAATGAAAAAAA CGCCCCCA CGCC TAAAGGCG TTTTACCCTGCTGCA TERM 3698 2816922 - 2816933 + g 74 -7.2 -4.15565 | opp_overlap 2816914 AAAAAAACGCCCCCA CGCC TAAA GGCG TTTTACCCTGCTGCA tctE 2818701 - 2817286 - | putative two-component system sensor kinase TERM 3699 2817913 - 2817923 + g 90 -8.2 -4.68593 | opp_overlap 2817912, overlap 2817891 2817893 CTGCGTTTTTAACAC CGCC AGC GGCG TTTTTAACTGGTGAG tctD 2819362 - 2818688 - | transcriptional regulator TERM 3700 2818755 - 2818765 + g 76 -3.2 -5.02074 | GTAATTCGTACATCG CTTC CCT GGAG TTTTTTACGCAGTCG TERM 3701 2819284 - 2819294 + g 77 -8.2 -4.07687 | CAAATACGCAGTCCA CGGC AAA GCCG TTTTGCACCAGCGCT TERM 3702 2820392 - 2820374 - g 83 -7.3 -4.63527 | opp_overlap 2820374 2820373 CGACGAGTTTAAAAA GCAGCGC GATCT GCGCGGC CTGTTTGAGTTCGAC SEN2630 2819517 - 2820494 + | hypothetical protein SEN2631 2820506 - 2820940 + | hypothetical protein SEN2632 2820951 - 2822465 + | hypothetical protein SEN2633 2822760 - 2823746 + | hypothetical protein TERM 3703 2823963 - 2823909 - g 71 -10.7 -3.30771 | opp_overlap 2823909 2823911, overlap 2823911 CCAGACCGGGCATAA CAGCGGCGTGAGCCATGCCGGG-GTGT ACT ACACGCCCGGCA-GCCTCAAAGCGCGG TTTTGTCTGGCGGGC TERM 3704 2823909 - 2823963 + G 83 -8.5 -4.52589 | opp_overlap 2823909 2823911, overlap 2823911 CCAGACCGGGCATAA CAGCGGCGTGAGCCATGCCGGG-GTGT ACT ACACGCCCGGCA-GCCTCAAAGCGCGG TTTTGTCTGGCGGGC TERM 3705 2823961 - 2823911 - g 78 -11.9 -3.22102 | opp_overlap 2823909 2823911, overlap 2823909 AGACCGGGCATAACA GCGGCGTGAGCCATGCCGGG-GTGT ACT ACACGCCCGGCA-GCCTCAAAGCGC GGTTTTGTCTGGCGG TERM 3706 2824402 - 2824418 + G 91 -7.2 -4.84311 | CGGCTGGTCAAAATG CTGGGC GTGGA GCCCGG TTTTATTATCTGCCC TERM 3707 2824511 - 2824521 + G 71 -8.2 -3.87994 | ACCCGATCCCCGATC CGGC AAT GCCG TTTCTCGGCGTCCAT ygaF 2823772 - 2825040 + | putative GAB DTP gene cluster repressor TERM 3708 2825259 - 2825226 - g 71 -10.9 -3.16564 | gap 1 GCGCGACGCCATCAA CGC-CGCCAATCGCGC CCT GCCCGCCTGGCGCGCG CTCACCGCCAAAGAG gabD 2825062 - 2826510 + | succinate-semialdehyde dehydrogenase gabT 2826525 - 2827808 + | 4-aminobutyrate aminotransferase TERM 3709 2827892 - 2827841 - f 85 -14 -3.05384 | opp_overlap 2827834 CGGGTGGCGACGTAA CTGTCTTATCCGGCCTACAA AAACCGTTTCGA TTGTAGGCCGAATAAGCCAG GCGCCATCCGGTAAA TERM 3710 2828154 - 2828164 + G 83 -8.2 -4.41633 | overlap 2828151 ATGGCCGTCGCCACA CCGG ATA CCGG TTCTTTTTCCACCTA TERM 3711 2828439 - 2828464 + G 74 -3.1 -4.89852 | overlap 2828440 2828462 ATTCTGGCGTTTATC GCGCTGGGCGC GACA GCGATTAGCGG TTTTTATCCGTATGC gabP 2827938 - 2829338 + | GabA permease (4-amino butyrate transport carrier) TERM 3712 2829863 - 2829877 + G 71 -4.2 -4.57304 | CGCTTATTTGACCTG GCGG CCCGCTA CCGC TTTATTTGGTTACGT TERM 3713 2830017 - 2829996 - g 70 -10.1 -3.37344 | overlap 2829997 GCGCCAGCGAATTAA TGCGTCAGC ATTT GCTGACGCC GATTCCCATTATTCG TERM 3714 2830016 - 2829997 - g 78 -13.6 -2.62192 | overlap 2829996 CGCCAGCGAATTAAT GCGTCAGC ATTT GCTGACGC CGATTCCCATTATTC ygaE 2829380 - 2830057 + | putative transcriptional regulator ygaU 2830528 - 2830079 - | hypothetical protein TERM 3715 2830248 - 2830238 - G 70 -5.4 -4.4009 | overlap 2830240 TTTTACGGTATAAAA CTGA CTT TCAG CCGCTGGCGTCGTGG TERM 3716 2830405 - 2830416 + g 91 -7.2 -4.93288 | TCACTTTGTCAGCGT CGGG TATT CCCG TTTTATTTAAATGTT TERM 3717 2830614 - 2830597 - R 90 -14.1 -3.31263 | AGGTTATCCTGATAA GCGGCGC TTAT GCGCCGC CGGTGGCCGGTAATT yqaE 2830786 - 2830628 - | hypothetical protein TERM 3718 2830838 - 2830826 - H 78 -6.3 -4.58395 | GTCATTGTTTAAAAA GAGAT TTT ATCTC TAAGCATAGTCAGTT TERM 3719 2830872 - 2830882 + H 76 -8.2 -4.18094 | overlap 2830871 CTGAGCCTGCCAGTC GCGC GCC GCGC TTTTACCCTCCTTTA TERM 3720 2830913 - 2830925 + H 78 -6.3 -4.68655 | CGCTTTTTACGCTGG CATCA GGT TGATG TTTATTTTAGAATTA SEN2641 2830969 - 2831268 + | putative ArsR-family regulatory protein ygaP 2831278 - 2831805 + | hypothetical protein stpA 2832554 - 2832153 - | DNA-binding protein StpA TERM 3721 2833031 - 2833012 - H 93 -9.4 -4.86033 | opp_overlap 2833012 2833011 AAATCGCCAGAAAAA CAATGCAT TATA ATGCATTG ATTTAAAAGTAATTA SEN2644 2833252 - 2833701 + | hypothetical protein TERM 3722 2833709 - 2833733 + T 100 -15.7 -4.35675 | opp_overlap 2833706, overlap 2833710 AGGCGTAAGTTAGCG TCGCGACTGGC ATT GCCAGTCGCGC TTTTAGTCGGTTTTT TERM 3723 2833710 - 2833732 + T 100 -19.2 -3.19778 | opp_overlap 2833706, overlap 2833709 GGCGTAAGTTAGCGT CGCGACTGGC ATT GCCAGTCGCG CTTTTAGTCGGTTTT ygaC 2834086 - 2833736 - | hypothetical protein ygaM 2834236 - 2834574 + | hypothetical protein SEN2647 2835992 - 2834658 - | putative transcriptional regulator SEN2648 2836081 - 2836512 + | hypothetical protein SEN2649 2836509 - 2836685 + | hypothetical protein TERM 3724 2836735 - 2836754 + F 78 -6.3 -4.67635 | opp_overlap 2836725 2836734 CAACACACGACAATC CGACGCG TTTCAT CGCGCCG TTTTCTCATTTTAAA nrdH 2836784 - 2837029 + | putative glutaredoxin TERM 3725 2837180 - 2837217 + GF 70 -3.4 -4.68593 | overlap 2837183 CGTCATACGGCGGCG GCGGGATGGCCGGT-GCG GTGC CGCGACAGGTGATCC-GC TTTTTAAATGATGAA nrdI 2837026 - 2837436 + | hypothetical protein TERM 3726 2838015 - 2838032 + GF 100 -10.5 -4.80882 | opp_overlap 2838015 CTGCAACTCTCCAAA CGCGGCG GCGG CGTCGCG TTTTTACTCTCCAAT TERM 3727 2838156 - 2838177 + GF 73 -7.9 -4.0641 | gap 1, overlap 2838157 GCCAACCAGCTTGGC GCGCGCCAGG GGG CC-GGCGCGG TTTATCTCCATGCGC TERM 3728 2838157 - 2838176 + GF 75 -11.4 -3.03525 | gap 1, overlap 2838156 CCAACCAGCTTGGCG CGCGCCAGG GGG CC-GGCGCG GTTTATCTCCATGCG TERM 3729 2838289 - 2838250 - gf 79 -2.9 -5.14965 | gap 1 ATGCCGACGAAAAAA TCC-GGATCAAAACGC TCTCTCTCG GCGTGGTGATCCCGGA TATCACCTTCCGGCT TERM 3730 2838331 - 2838317 - gf 74 -2.7 -4.86731 | opp_overlap 2838318, overlap 2838318 2838326 GCTGGCGAAAGAAAA CGCGC AAATG GCGCT CTTTTCGCCCTATGA nrdE 2837409 - 2839553 + | ribonucleoside-diphosphate reductase 2 alpha chain TERM 3731 2840201 - 2840234 + G 84 -8.9 -4.2461 | opp_overlap 2840205 AAAAACTATCGGCAA TCGAGCGTGAAGAGT TAAA GCTTTTCGCGCTGGA TTTGTTGATGGAACT nrdF 2839564 - 2840523 + | ribonucleoside-diphosphate reductase 2 beta chain TERM 3732 2840531 - 2840562 + F 90 -9.6 -4.41616 | ATTTTTAACCTTGCG GGCATGGGAAAT AACGTTAC ATTTTCCATGCC TTTATTTCAAGCAAT TERM 3733 2840636 - 2840664 + F 93 -9 -4.83593 | opp_overlap 2840627 2840636, overlap 2840638 ATACGAGTGACATTA TTCACCTGGATT CCTCC AATTCAGGTGGA TTTTTGCTGGTTGTT TERM 3734 2841320 - 2841310 - g 71 -4.6 -4.57073 | overlap 2841311 GAGCGTCGCGAAAAA GCGC TGG ACGC CTTGCGTCAGGTGGG proV 2840878 - 2842080 + | glycine betaine/l-proline transport ATP-binding protein proW 2842073 - 2843137 + | glycine betaine/L-proline transport system permease protein P TERM 3735 2843584 - 2843574 - g 93 -4.6 -5.64274 | TGATCGATAAAAAAA CCGC CGA GCAG TACAACATCACCAAT proX 2843207 - 2844202 + | glycine betaine-binding periplasmic protein precursor TERM 3736 2845127 - 2845148 + G 71 -10.1 -3.53444 | gap 1, overlap 2845126 TGATTGGCCTGTTTG GC-CTGGCGG GGG CCGCCGGCGC TTTAGGCGCGCGTCC TERM 3737 2845452 - 2845468 + G 85 -11.5 -4.0371 | opp_overlap 2845452, overlap 2845453 CTCCGCCTGGCAACA TGCCGGC TGG GCCGGCG TTTGTCTGGCGGGTG TERM 3738 2845453 - 2845467 + G 81 -12.8 -3.01905 | opp_overlap 2845452, overlap 2845452 TCCGCCTGGCAACAT GCCGGC TGG GCCGGC GTTTGTCTGGCGGGT SEN2657 2844367 - 2845551 + | putative transmembrane transport protein TERM 3739 2846108 - 2846129 + G 71 -5.9 -4.24326 | opp_overlap 2846108, overlap 2846100 2846111 GCCAGCCGTCACGAA GACTTTCCT TATC AGGAAATTC TTTTGACTCGTCTTT TERM 3740 2846111 - 2846126 + G 71 -6.2 -4.22883 | opp_overlap 2846108, overlap 2846108 2846100 AGCCGTCACGAAGAC TTTCCT TATC AGGAAA TTCTTTTGACTCGTC emrR 2846048 - 2846578 + | putative transcriptional regulator TERM 3741 2846626 - 2846649 + F 71 -7.4 -3.85817 | opp_overlap 2846620 ACAGGAAAGCGGACA GGCCGGCA CGCATTAC TGCTGGCC TTTCTGACAACAGGT TERM 3742 2847042 - 2847021 - g 74 -6.5 -4.323 | gap 1, opp_overlap 2847034, overlap 2847014 2847012 2847022 2847023 TTGAAAGAGCCAAAA CG-GCGCTGG CCT CCAGCGTGCG CCAAACGCACCAGTT TERM 3743 2847129 - 2847105 - g 84 -6.4 -5.03314 | gap 1, overlap 2847106 TCGACGTGCAAAAAA CCGCCCTGGCG CAAG CGC-AGAGCGA CCTTAACCGTCGTGT emrA 2846705 - 2847877 + | multidrug resistance protein A TERM 3744 2848652 - 2848677 + G 83 -7.6 -4.56791 | opp_overlap 2848654, overlap 2848645 2848655 GATCGTCTGGGAACT GACCGACGAT CACCCT ATCGTCGATC TTTCTCTTTTTAAAT emrB 2847894 - 2849432 + | multidrug resistance protein B TERM 3745 2849446 - 2849461 + T 100 -9 -5.14563 | opp_overlap 2849446 AACTATCTGATAAAA GGGATC TGCG GATCCC TTTTTTAGTAAACCA TERM 3746 2849461 - 2849446 - T 86 -9 -4.41206 | opp_overlap 2849446 AACTATCTGATAAAA GGGATC TGCG GATCCC TTTTTTAGTAAACCA SEN2661 2850851 - 2849481 - | putative glycoporin TERM 3747 2849713 - 2849725 + g 70 -2.7 -4.77567 | TCGATATTGGTAGCA TTGAA GGC TTCGA TTTTGTTATGCGCAT TERM 3748 2850009 - 2849992 - G 75 -6.2 -4.56775 | ATCGCCGTTGAAAAA CGCCCG TTTTGC CAGGCG ATAACCGGACGGACG TERM 3749 2851144 - 2851162 + r 86 -11.7 -3.55122 | opp_overlap 2851144, overlap 2851140 TTAAGCAATAAAAAA CCCCGGT CATAA ACCGGGG TTAATTTAAATACTG TERM 3750 2851162 - 2851144 - R 100 -12.4 -5.5604 | opp_overlap 2851144 2851140 TTAAGCAATAAAAAA CCCCGGTC ATA AACCGGGG TTAATTTAAATACTG luxS 2851712 - 2851197 - | autoinducer-2 production protein LuxS TERM 3751 2851610 - 2851642 + g 71 -4.7 -4.56597 | opp_overlap 2851608 AACGCAGATCAAACA CGGTGATTGCGTCGC CAT GCGGGGTGTTCATCG TTTTTGCAACCCGGA TERM 3752 2851830 - 2851848 + r 100 -14.6 -5.48213 | opp_overlap 2851827 CAGCGATGAAATTTT GGCCACTC CGT GAGTGGCC TTTTTCTTTTGGGTC gshA 2853418 - 2851862 - | Glutamate--cysteine ligase TERM 3753 2852726 - 2852757 + g 74 -2.2 -5.0133 | gap 1, opp_overlap 2852715, overlap 2852729 2852748 2852755 CAAACGCAGCGACGT CGCA-TACGGCAGGT AGT ACATGCCGCAGTCCG TTTTTTCAAACGGTA yqaA 2853920 - 2853495 - | hypothetical protein yqaB 2854483 - 2853917 - | hypothetical protein TERM 3754 2854423 - 2854396 - G 74 -7.6 -4.09243 | gap 1, opp_overlap 2854397, overlap 2854397 CATAGCGCCCCAAAA CCTCACGCCACGC TTT GCGATGCGTG-GG TTCGGTATCCAGGAG TERM 3755 2854632 - 2854647 + r 72 -9 -3.54743 | overlap 2854638 ATTCGCCTTATGGGC CGTTGC TGAC GCAACG TTATCCTTCCTGGTG TERM 3756 2854885 - 2854903 + r 71 -9.5 -3.14211 | overlap 2854902 GGATTACTCGCCTTA CGGCTCG CCCTT CGGGCCG TTGCTAACGCAACGT TERM 3757 2854902 - 2854917 + r 72 -9 -3.54743 | overlap 2854885 2854908 GCTCGCCCTTCGGGC CGTTGC TAAC GCAACG TTATCCTTCCTGGTG csrA 2855789 - 2855604 - | carbon storage regulator TERM 3758 2855972 - 2856017 + r 72 -9 -3.61089 | gap 2, opp_overlap 2855985 TTATCGTTGTCGATA GCGTTGACGTAAACGCCGCAGC ACGA GCTGCGGCGCCAACG--AACGC TTATAATTATTGCAA TERM 3759 2856006 - 2855985 - R 100 -17.3 -3.6502 | opp_overlap 2855972 TAGCGTTGACGTAAA CGCCGCAGC ACGA GCTGCGGCG CCAACGAACGCTTAT alaS 2858654 - 2856024 - | Alanyl-tRNA synthetase SEN2669 2859390 - 2858890 - | putative regulatory protein TERM 3760 2859440 - 2859421 - R 91 -11.4 -4.26189 | opp_overlap 2859421 2859412 GGAGAAATGCCAAAA GGGCCGCA TAAA TGCAGCCC TTGATGGTAATTTAA recA 2860568 - 2859507 - | recombinase A ygaD 2861150 - 2860653 - | hypothetical protein TERM 3761 2861620 - 2861595 - R 80 -9.8 -3.89505 | gap 1, overlap 2861585 AAAAAGCCATAATAA TAGCGGAGGGG GTGCT CCCCTCC-CTA AGCGTAAATTAGCGC mltB 2862708 - 2861629 - | membrane-bound lytic transglycosylase B precursor TERM 3762 2863176 - 2863189 + G 79 -3.1 -5.1471 | GCTACCTGCTTTTAC CGTTT ATCG GAACG TTTGTTTTTTGTAAT srlA 2862962 - 2863525 + | PTS system, glucitol/sorbitol-specific IIBC component TERM 3763 2863700 - 2863690 - g 71 -8.2 -3.9122 | overlap 2863691 GACGGCTTTAAAGAA GGCG AAC CGCC GGAAGCGGAGATCGG srlE 2863522 - 2864493 + | PTS system, glucitol/sorbitol-specific IIBC component slrB 2864505 - 2864867 + | PTS system, glucitol/sorbitol-specific IIA component srlD 2864879 - 2865658 + | sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase) gutM 2865735 - 2866094 + | glucitol operon activator protein TERM 3764 2866539 - 2866526 - g 84 -3.1 -5.30686 | gap 1, overlap 2866528 AACACCCACAAAAAA GC-GCT GAT AGCCGC AGCCGCTGTGAAATA srlR 2866292 - 2867065 + | glucitol operon repressor gutQ 2867058 - 2868023 + | putative phosphosugar binding protein ygaA 2869540 - 2868020 - | putative sigma-54-dependent transriptional regulator TERM 3765 2869825 - 2869811 - g 86 -7.8 -4.68724 | overlap 2869812 GCACTGAATACAAAA CGCTGC GCG GCAGCA GCTATAACAGCTATC TERM 3766 2870116 - 2870102 - g 70 -7 -4.09739 | TTAAGGTGGTGAAAA CCGGCG ATA CGCTGG ATATCGGCAACGGCA SEN2681 2869726 - 2871165 + | putative flavoprotein TERM 3767 2871587 - 2871573 - g 77 -11.4 -3.58726 | opp_overlap 2871582 2871584 2871585 GCCTGTGAGACACAA CTGCGC GAC GCGCAG CGAGTGCTGATTGTC ygbD 2871162 - 2872295 + | putative rubredoxin reductase hypF 2874632 - 2872392 - | hydrogenase maturation protein TERM 3768 2872653 - 2872633 - G 71 -6 -4.30844 | overlap 2872635 AGCGCATCATGAAAA GCCCAGGC GCGTT GCGCGGGC GTGGCCTGCCAGTTC TERM 3769 2872979 - 2872965 - G 82 -11.4 -3.86346 | CCAGTCCGGCACAAA GCGCAG GCA CTGCGC CAACAGATTACGCCA TERM 3770 2874135 - 2874115 - G 74 -6.8 -4.25104 | opp_overlap 2874115 2874113 GGCTGGGCATGAAAA CGGCGATC GTACG GATCGCGG TATTCGCTGTCGCAT hydN 2875323 - 2874778 - | electron transport protein TERM 3771 2874808 - 2874822 + g 87 -8.5 -4.58395 | opp_overlap 2874789 2874807, overlap 2874809 TGCCGTTGAATCCAG CGCCG CGCGA CGGCG TTTTTCCGCGCTCAG TERM 3772 2875430 - 2875459 + r 90 -15.1 -2.62616 | opp_overlap 2875446, overlap 2875418 TTTCGTGAGCATTTA CGTGTCATCGTCA CAAG TGTCGATGACACG TAATGTCGCCAGTGG hycI 2876831 - 2876361 - | hydrogenase 3 maturation protease hycH 2877234 - 2876824 - | formate hydrogenlyase maturation protein TERM 3773 2876879 - 2876907 + g 70 -8.9 -3.75024 | opp_overlap 2876888, overlap 2876888 TCCTGATGAATGTCA TGCAGCATACTGA GCA TCAGTTTGCTCCA TTCTTGCTGCTGCGG TERM 3774 2876927 - 2876963 + g 71 -10.1 -3.59315 | gap 1, overlap 2876930 TGCTGCTGCGGGGTC TGCGCGGCGCGCGCCT CATCAA ACGCGCGCGCCA-GCA TTTGCACATGGTTGA TERM 3775 2876930 - 2876962 + g 76 -12.7 -2.75268 | gap 1, overlap 2876927 TGCTGCGGGGTCTGC GC-GGCGCGCGCCT CATCAA ACGCGCGCGCCAGC ATTTGCACATGGTTG hycG 2877998 - 2877231 - | formate hydrogenlyase subunit 7 hycF 2878540 - 2877998 - | formate hydrogenlyase subunit 6 hycE 2880259 - 2878550 - | formate hydrogenlyase subunit 5 hycD 2881200 - 2880277 - | formate hydrogenlyase subunit 4 hycC 2883029 - 2881203 - | formate hydrogenlyase subunit 3 TERM 3776 2881275 - 2881287 + g 71 -10.5 -3.28712 | opp_overlap 2881271 2881269 ACGACGGAACAGCAC CGCGG CCG CCGCG TTCTGCCAGCCCGGC TERM 3777 2882622 - 2882604 - G 76 -12.4 -3.14211 | opp_overlap 2882603 2882604 2882606 ACCGCCGGTGAGGAA CACGGCGC AGA GCGCCATG ATTTCCGCCATCACC TERM 3778 2882979 - 2882967 - G 75 -6.9 -4.52214 | overlap 2882975 AAACGAAAACAGAAA CGCCA GAA CGGCG GCGGCGGCAAACCAC TERM 3779 2883003 - 2882975 - G 73 -10.2 -3.41528 | gap 1, overlap 2882967 ACAGAAACGCCAGAA CGGCGGCG-GCGG CAAA CCACGCGACGCCG CTAGTAATCAGTGAA hycB 2883637 - 2883029 - | formate hydrogenlyase subunit 2 TERM 3780 2883761 - 2883727 - R 83 -10 -4.11216 | overlap 2883729 CGCCCATCCCCAAAA CATTCATGACGTGGCG CAA CGCCACATCGCGAATC AAAGCGGGCAACACC TERM 3781 2883759 - 2883729 - R 88 -12.6 -3.65542 | overlap 2883727 CCCATCCCCAAAACA TTCATGACGTGGCG CAA CGCCACATCGCGAA TCAAAGCGGGCAACA hycA 2884244 - 2883783 - | formate hydrogenlyase regulatory protein hypA 2884454 - 2884810 + | putative hydrogenase nickel incorporation protein HypA TERM 3782 2884842 - 2884811 - f 70 -8.8 -3.40601 | gap 1 GAAACTGAAGATTAA TGCCGGATAGACG CTCGCGT CGCC-ATCCGGCA GAAAGCCTGTAACAA hypB 2884879 - 2885751 + | hydrogenase isoenzymes formation protein HypB hypC 2885742 - 2886014 + | hydrogenase isoenzymes formation protein HypC TERM 3783 2886133 - 2886155 + G 86 -7.6 -4.82855 | opp_overlap 2886131, overlap 2886134 GCGCATTATGGAAGT CTGCGGGGGT CAT ACCCACGCAA TTTTTAAATTTGGTC TERM 3784 2886134 - 2886154 + G 77 -11.1 -3.48629 | opp_overlap 2886131, overlap 2886133 CGCATTATGGAAGTC TGCGGGGGT CAT ACCCACGCA ATTTTTAAATTTGGT TERM 3785 2886909 - 2886881 - g 72 -11 -3.05384 | opp_overlap 2886872 CTGGGCGTGATTGAA TCCTCCGGCGTC CACCT GACGCCAGAGTA TCAGCGCTTTGACGC hypD 2886014 - 2887135 + | hydrogenase isoenzymes formation protein HypD TERM 3786 2887271 - 2887293 + G 70 -5.4 -4.38712 | opp_overlap 2887271 AGCTGGCGCAACTGA CGGCGGAGGG CGA CCGTCTGGCG TTTTCTACCGATAGC hypE 2887132 - 2888142 + | hydrogenase isoenzymes formation protein HypE fhlA 2888361 - 2890439 + | transcriptional activator of the formate hydrogenlyase system ygbA 2890845 - 2890501 - | hypothetical protein TERM 3787 2890643 - 2890683 + g 95 -9.6 -4.72272 | opp_overlap 2890657, overlap 2890644 ATCTCCTCGCGTTTA GCCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGGG TTTTTCCTCGCCAAA TERM 3788 2890644 - 2890682 + g 84 -13.1 -3.43042 | opp_overlap 2890657, overlap 2890643 TCTCCTCGCGTTTAG CCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGG GTTTTTCCTCGCCAA TERM 3789 2891611 - 2891577 - g 74 -2.1 -5.09426 | gap 1 CCGAACTGGAAAAAA TTC-CCGCCGATCAGC GCTG GCTGGTCACCAGTGAA GGCGCGTTCTCTTAC sitA 2891027 - 2891944 + | Iron transport protein, periplasmic-binding protein sitB 2891941 - 2892762 + | Iron transport protein, ATP-binding component sitC 2892759 - 2893619 + | Iron transport protein, inner membrane component sitD 2893610 - 2894458 + | Iron transport protein, inner membrane component avrA 2895465 - 2894557 - | pathogenicity island membrane protein sprB 2896381 - 2895626 - | possible AraC-family transcriptional regulator TERM 3790 2895801 - 2895817 + g 77 -3.7 -5.03145 | TAAATACTGACGGTT TTTGTTC CCA GACCAAA TTTTTTCGCCAGTTC hilC 2897653 - 2896766 - | possible AraC-family transcriptional regulator SEN2710 2898450 - 2897998 - | hypothetical protein found within S. typhi pathogenicity island 1 TERM 3791 2898062 - 2898039 - G 71 -6 -4.36914 | opp_overlap 2898039 2898042, overlap 2898043 CCCCGCCCGATAAAA TAATCTCCTG CATC CAGGAGGTCA TTTGTGACTGTGCGT orgA 2899127 - 2898447 - | cell invasion protein SEN2712 2899683 - 2899084 - | cell invasion protein TERM 3792 2899447 - 2899477 + gr 100 -16.3 -4.1899 | gap 1, opp_overlap 2899427, overlap 2899447 2899450 CTGCGGCAGTCGGCG C-CACTGACGCAGC CACA GCTGCGTCAGTGAG TTTTGAATACACTCC TERM 3793 2899447 - 2899476 + gr 100 -16.5 -3.11073 | opp_overlap 2899427, overlap 2899447 2899450 CTGCGGCAGTCGGCG CCACTGACGCAGC CACA GCTGCGTCAGTGA GTTTTGAATACACTC TERM 3794 2899450 - 2899473 + gr 100 -16.8 -2.76404 | opp_overlap 2899427, overlap 2899447 2899447 CGGCAGTCGGCGCCA CTGACGCAGC CACA GCTGCGTCAG TGAGTTTTGAATACA prgK 2900413 - 2899655 - | pathogenicity 1 island effector protein TERM 3795 2899687 - 2899718 + gr 77 -4.5 -4.91109 | opp_overlap 2899716 TCGCCTTATCATCAG CCGTTATGCCT TTCTTATTGC GGGCATAATGG TTTTTGTAATACCAG prgJ 2900715 - 2900410 - | pathogenicity 1 island effector protein prgI 2900976 - 2900734 - | pathogenicity 1 island effector protein prgH 2902179 - 2901001 - | pathogenicity 1 island effector protein hilD 2902495 - 2903424 + | AraC-family transcriptional regulator TERM 3796 2903695 - 2903727 + F 100 -11.3 -4.81163 | overlap 2903697 GATGACACTATCTCC TTCCGGCTTTAACCC TGT GGATTAAGGCCGGCA TTTTATTCATATTTA TERM 3797 2903697 - 2903725 + F 83 -13.9 -2.66616 | overlap 2903695 TGACACTATCTCCTT CCGGCTTTAACCC TGT GGATTAAGGCCGG CATTTTATTCATATT hilA 2904516 - 2906177 + | invasion protein regulator iagB 2906195 - 2906677 + | cell invasion protein TERM 3798 2906733 - 2906678 - T 74 -7.2 -4.32678 | opp_overlap 2906687 2906689, overlap 2906689 GCGTCAAACAAATAA TTATACAGAAATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATGTTTTTATCA GCGTGCCGTCGTCAT TERM 3799 2906687 - 2906724 + T 100 -10.1 -4.84359 | opp_overlap 2906678 2906689, overlap 2906689 AAATAATTATACAGA AATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATG TTTTTATCAGCGTGC TERM 3800 2906722 - 2906689 - T 100 -14.9 -4.18019 | opp_overlap 2906689 2906687, overlap 2906678 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCGT TERM 3801 2906689 - 2906722 + T 95 -12.7 -4.04397 | opp_overlap 2906678 2906689, overlap 2906687 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCGT sptP 2908362 - 2906731 - | tyrosine phosphatase (associated with virulence) sicP 2908741 - 2908349 - | chaperone (associated with virulence) iacP 2909320 - 2909072 - | probable acyl carrier protein sipA 2911396 - 2909339 - | pathogenicity island 1 effector protein (function unknown) TERM 3802 2910531 - 2910541 + g 76 -3.2 -5.0133 | TTGATATTAATACCC GTAG GTT CTGC TTTTTTCCCACCATC sipD 2912446 - 2911415 - | pathogenicity island 1 effector protein sipC 2913746 - 2912517 - | pathogenicity island 1 effector protein TERM 3803 2913501 - 2913521 + g 70 -6.9 -4.07687 | CAAATCCTGATTCAT GTCGGTATT TTG AATACTGGC TTTTAAAAAGGACGT sipB 2915555 - 2913774 - | pathogenicity island 1 effector protein TERM 3804 2913816 - 2913802 - G 74 -4.2 -4.77165 | opp_overlap 2913803, overlap 2913803 TGGCGCAGAATAAAA CGCGAA GCA TCCGCA TTTTGCTGTACCGCA TERM 3805 2913964 - 2913946 - G 70 -5.2 -4.46212 | opp_overlap 2913948 2913949, overlap 2913947 2913949 2913954 CGGGCGAGCATAAAA TCAGCAAG CGC CTCGCTGG CATTTTTAATAAATA TERM 3806 2913948 - 2913966 + g 74 -4.4 -4.7497 | opp_overlap 2913947 2913946 2913949 2913954, overlap 2913949 GGCGAGCATAAAATC AGCAAGCG CCT CGCTGGCA TTTTTAATAAATACG TERM 3807 2914337 - 2914351 + g 74 -4.2 -4.77165 | CACCAACAATGCTGC CGGC CATCTCT GCCG TTTTCTTATCGACGC TERM 3808 2914572 - 2914556 - G 73 -5.1 -4.59773 | overlap 2914568 CCCCACCGGTAAAAA CAGCG GCCACAA CGCTG ACAATGGTTAGCAGC TERM 3809 2915097 - 2915109 + g 81 -6.9 -4.77438 | GTCATAAACACTCTT GGCGG TAT CCGTC TTTTTGATACTGGCT TERM 3810 2915505 - 2915488 - G 74 -7.7 -4.09739 | gap 1, opp_overlap 2915494, overlap 2915477 2915489 CGAACGCCTTCAAAA GCCGCCTC AGC GAGGCG-C GGATTTTGGGTATAT sicA 2916055 - 2915558 - | unknown function spaS 2917263 - 2916193 - | secretory protein (associated with virulence) spaR 2918041 - 2917250 - | secretory protein (associated with virulence) TERM 3811 2917860 - 2917850 - G 72 -2.4 -4.87665 | CGCCACCGATAAAAA CGGC GGC GCCT CGTTCAATGCATGCG TERM 3812 2917979 - 2917966 - G 95 -3.1 -5.84381 | gap 1 GCAGGAAGAAAAAAA TCGGCG CTA CGC-GA GCAAACCCTAGTGCC spaQ 2918305 - 2918045 - | secretory protein (associated with virulence) TERM 3813 2918256 - 2918204 - G 79 -11.4 -3.61715 | gap 1, overlap 2918205 TACCGTCTGGAATAA CCCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGGA TCAAAACAAGATAGA TERM 3814 2918255 - 2918205 - G 76 -12.7 -2.76815 | gap 1, overlap 2918204 ACCGTCTGGAATAAC CCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGG ATCAAAACAAGATAG spaP 2919005 - 2918331 - | secretory protein (associated with virulence) spaO 2919906 - 2918995 - | surface presentation of antigens protein (associated with type III secretion and virulence) TERM 3815 2919371 - 2919357 - G 71 -5.7 -4.24342 | TCGCGTAGCAATAAA CTTCC GCACG GGAAG TACGAATCAGGAGTA invJ 2920916 - 2919906 - | surface presentation of antigens protein (associated with type III secretion and virulence) TERM 3816 2920383 - 2920400 + g 74 -6.9 -4.30719 | opp_overlap 2920382 GCCCTCTTTACGAAC GCCTTCG CCCG CGATGGC TTTATTATCCCCAGG TERM 3817 2920734 - 2920744 + g 71 -4.6 -4.59089 | TGCCGCCAGTAATAC CGGT AAA GCCG TTTCTTTATGCATTA invI 2921359 - 2920916 - | secretory protein (associated with virulence) invC 2922632 - 2921337 - | secretory apparatus ATP synthase (associated with virulence) TERM 3818 2921922 - 2921897 - G 72 -2.4 -4.91712 | overlap 2921898 TGGAATCGATAAAAA GCACGACCCG TTTTCC CTGGTCGCGA AAATATTCCGCTACG TERM 3819 2922563 - 2922583 + g 86 -7.5 -4.73105 | CCACATCGCGCAATT CCGCCTCAA TAA TTGGGCCGG TTATTTTTTGTGGGT invB 2923036 - 2922629 - | secretory protein (associated with virulence) TERM 3820 2922789 - 2922773 - G 78 -12.3 -3.21099 | CTCCCCCAGTAGTAA TTGCCCG CCG CGGGCAA AATGGCATCCTTCCA invA 2925117 - 2923060 - | possible secretory protein (associated with virulence) TERM 3821 2924716 - 2924692 - G 73 -5.5 -4.55689 | opp_overlap 2924693, overlap 2924693 ACCATCCAGAGAAAA TCGGGCCGCGA CTT CCGCGACGCGT TCTGAACCTTTGGTA invE 2926260 - 2925142 - | cell invasion protein invG 2927945 - 2926257 - | secretory protein (associated with virulence) invF 2928592 - 2927942 - | possible AraC-family regulatory protein TERM 3822 2928502 - 2928490 - G 73 -5.5 -4.59853 | overlap 2928491 TTAACGGTCGAAAAA CCAGG TCT CCTGA TACTGGTGCGACAAC TERM 3823 2928641 - 2928653 + H 76 -9.1 -3.66438 | overlap 2928633 CCATGCTTCCGGGCT GCGGA TTT TCCGC TTCTCTCCTTCTTTA TERM 3824 2929335 - 2929324 - g 71 -5.8 -4.29621 | TATAAACAAACCAAA GAGC AGGC GCTC ACCTTCTTCCAGGAA TERM 3825 2929423 - 2929411 - g 79 -3.4 -5.16572 | opp_overlap 2929399 ACCGAATTTAAAAAA GTTC TTCTT GAAC CCGGAAGTAAGAATT invH 2929048 - 2929491 + | cell adherance/invasion protein TERM 3826 2929643 - 2929661 + F 87 -10.3 -4.19311 | opp_overlap 2929630 2929645, overlap 2929645 ATCTGCTTTTTGATA CAGCAGC ACCTC GCTGCTG CTTTTTTTATTTGTG TERM 3827 2929645 - 2929662 + F 100 -7 -6.02919 | opp_overlap 2929630 2929645, overlap 2929643 CTGCTTTTTGATACA GCAGCA CCTCGC TGCTGC TTTTTTTATTTGTGA TERM 3828 2930290 - 2930314 + F 71 -10.1 -3.17274 | opp_overlap 2930284, overlap 2930288 2930286 2930309 ACTATATCAGCCTCA TATGTACGCCT TGA AAGCGTACATA TATGTATTATAATTG SEN2743 2930354 - 2930644 + | pathogenicity island protein TERM 3829 2930709 - 2930681 - g 90 -10.4 -4.2349 | CCGCGATAGGGAAAA CCCACAATCGAA TGAAT TTTGATTGTGGG GATGCCGATCTGAAC SEN2744 2930641 - 2931168 + | pathogenicity island protein TERM 3830 2932432 - 2932442 + G 89 -3.2 -5.44119 | overlap 2932430 GGTTCTTTCTGTTCA GGCA ATC TGTC TTTTTTTAAAATAAA pphB 2931805 - 2932461 + | possible serine/threonine protein phosphatase SEN2746 2933200 - 2932706 - | membrane protein SEN2746A 2933895 - 2933227 - | membrane protein TERM 3831 2934054 - 2934034 - R 74 -10.5 -3.25823 | GCTCCCGGAGATTAA TGAGAGACA TCC TGCCTCTCA CCGAAGACCAACCAC SEN2747 2934879 - 2934469 - | hypothetical protein TERM 3832 2936248 - 2936233 - g 90 -4.6 -5.40072 | overlap 2936235 CGTTGCGTAAAAAAA TGGGCG ATTT CGCCGA GCTGCGCGACCTCCT mutS 2935080 - 2937605 + | DNA mismatch repair protein TERM 3833 2937646 - 2937607 - T 100 -17.2 -3.5394 | gap 1, opp_overlap 2937598 2937612 2937645 AAAGTCTGGTGTAAA CGTGTCGGGCCCGATAGCG CCG CGTTATCGGGCCC-ACGCG CCGGCACAGGCTTTT SEN2749 2938041 - 2937661 - | conserved hypotheticalprotein TERM 3834 2937891 - 2937881 - G 95 -8.2 -5.00616 | TGCGCCTGGAAAAAA GCGC CCA GCGC CGGATAATCCAGACA SEN2750 2939246 - 2938038 - | possible membrane transport protein TERM 3835 2939174 - 2939164 - G 74 -6.8 -4.27617 | GACATCGCAGGAAAA GCCA CGC TGGC AATAAACAGATTAAT TERM 3836 2939342 - 2939318 - H 82 -13.1 -2.90075 | overlap 2939320 CGCGCTTCAACGATA TACTGTCAAAA TAA TTTTGACAGTA AAGGAGCTCGCCATG TERM 3837 2939340 - 2939320 - H 75 -11.3 -3.00298 | overlap 2939318 CGCTTCAACGATATA CTGTCAAAA TAA TTTTGACAG TAAAGGAGCTCGCCA SEN2751 2939334 - 2940266 + | possible LysR-family transcriptional regulator SEN2752 2941804 - 2940308 - | possible permease TERM 3838 2941715 - 2941681 - G 81 -12.9 -3.02144 | gap 1, overlap 2941683 CCATTCCCCCCAACA GACCGGCGATGCAGGC CGCC GCCAGCATCGC-GATC AGCGCATGAACACGG SEN2753 2942751 - 2941801 - | hypothetical protein ygbM 2943567 - 2942791 - | putative hydroxypyruvate isomerase ygbL 2944210 - 2943572 - | possible sugar aldolase TERM 3839 2943749 - 2943734 - G 78 -6 -4.75372 | ATTAGCCAGTAAAAA GGCCTG ATGC CGGGCC GCCAGCGCAGCCAAA ygbK 2945469 - 2944207 - | hypothetical protein TERM 3840 2944821 - 2944805 - G 75 -11.5 -3.32963 | ATTGCCAGCCCAGAA CCGCCGG TCA CCAGCGG AGCATCACGCAAAAC ygbJ 2946386 - 2945463 - | hypothetical protein TERM 3841 2946493 - 2946479 - H 75 -2.9 -5.24129 | opp_overlap 2946479, overlap 2946482 TTGTTTCACAAAAAA TAACA AAATA TGTTA TTTTTTGTGAAGGCA TERM 3842 2946479 - 2946493 + H 75 -2.9 -5.24129 | opp_overlap 2946479 2946482 TTGTTTCACAAAAAA TAACA AAATA TGTTA TTTTTTGTGAAGGCA ygbI 2946583 - 2947347 + | DeoR-family trancriptional regulator TERM 3843 2947364 - 2947353 - T 77 -7.2 -4.52347 | overlap 2947354 CAAACAATAGCAAAA CGGC GCAA GCCG CTTACGTCATCATCT SEN2759 2947770 - 2947366 - | putative regulatory protein SEN2760 2947941 - 2948534 + | possible decarboxylase SEN2761 2948534 - 2949961 + | hypothetical protein SEN2762 2950011 - 2950208 + | hypothetical protein TERM 3844 2950246 - 2950203 - T 100 -14.8 -4.27117 | opp_overlap 2950215, overlap 2950215 CTGGCAGAAGACAAA CGGTAAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTGACAA GGGTACTTACTCGCG TERM 3845 2950215 - 2950234 + T 100 -13.6 -5.40072 | opp_overlap 2950203 2950215 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG TERM 3846 2950234 - 2950215 - T 100 -13.6 -5.82388 | opp_overlap 2950215, overlap 2950203 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG rpoS 2951245 - 2950253 - | RNA polymerase sigma subunit RpoS (sigma-38) nlpD 2952441 - 2951308 - | lipoprotein NlpD precursor TERM 3847 2951772 - 2951786 + g 73 -5 -4.6635 | overlap 2951763 CCGTCCCAGCAGGCT TGTTGT TTG GCAACA TTTTGTTAGCACTTT pcm 2953243 - 2952617 - | L-isoaspartyl protein carboxyl methyltransferase type II TERM 3848 2952696 - 2952680 - G 77 -7.9 -4.33417 | overlap 2952681 GGTATCGATAATAAA TTCGCCG CCC CGGCGAC GCACGCGTTTCAAAA TERM 3849 2952695 - 2952681 - G 74 -11.4 -3.19568 | overlap 2952680 GTATCGATAATAAAT TCGCCG CCC CGGCGA CGCACGCGTTTCAAA surE 2953998 - 2953237 - | Acid phosphatase surE truD 2955028 - 2953979 - | tRNA pseudouridine synthase D TERM 3850 2954059 - 2954046 - G 77 -8.1 -4.07687 | ACGCTGGTGGCAAAA CTGCC TGCG GGCAG CCAGAAACGTAACTC TERM 3851 2954436 - 2954426 - G 74 -8.2 -4.01158 | overlap 2954427 AATTTGATTAAACAA CGCG CTA CGCG CCGCCGACAACCAAA TERM 3852 2954470 - 2954483 + g 71 -9.5 -3.51232 | overlap 2954467 TGCGTTTATTGCGAT CGCGC ACCG GCGCG TTACTTTGCGCCCAG ispF 2955504 - 2955025 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2956214 - 2955504 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3853 2955823 - 2955837 + g 70 -7 -4.21908 | opp_overlap 2955823, overlap 2955806 2955825 GGACTGGCGAGGATA CCGCCG ACC CGGCTG TTTTCGCTGATGGTC ygbQ 2956544 - 2956233 - | putative cell division protein FtsB TERM 3854 2956623 - 2956652 + r 81 -12.3 -3.12351 | gap 1, opp_overlap 2956623 2956624, overlap 2956624 GGATTGCCGCGACAA CG-CCGGCAAATGT ACC ACATTTGCCGGATG TTACGTATACCCGAG TERM 3855 2956651 - 2956623 - R 74 -10.3 -3.29144 | opp_overlap 2956623 2956624, overlap 2956624 GGATTGCCGCGACAA CGCCGGCAAATGT ACC ACATTTGCCGGAT GTTACGTATACCCGA TERM 3856 2956650 - 2956624 - R 83 -13.8 -2.57344 | opp_overlap 2956624 2956623, overlap 2956623 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 3857 2956624 - 2956650 + r 86 -13.8 -3.12327 | opp_overlap 2956623 2956624, overlap 2956623 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 3858 2956774 - 2956759 - R 76 -8.2 -4.15698 | TAGCCATATAAATAA CGCGCC GAAC AGCGCG CCTACGGCCAGTAGA ygbE 2957091 - 2956735 - | hypothetical protein cysC 2957714 - 2957109 - | Adenylylsulfate kinase TERM 3859 2957651 - 2957622 - G 79 -12.9 -2.90813 | gap 1, opp_overlap 2957624, overlap 2957619 2957624 GAGTCCGGTAAACCA CAGCACCAC-GCCA CGG TGGCCGTGGAGCTG TTCACGGGCGGCGAC cysN 2959140 - 2957701 - | Sulfate adenylyltransferase subunit 1 TERM 3860 2957938 - 2957886 - G 70 -2.8 -4.82901 | gap 2, opp_overlap 2957894, overlap 2957889 2957890 GTCGGTCGATAAAAA TCAGCCCGCCCGTCACCGGATTTT GCTGATA AATATCCAGCG-CGAGC-GGCTCA TCGAATGTCATCTCC TERM 3861 2958276 - 2958260 - G 71 -5.8 -4.26076 | overlap 2958269 TTATCGCCATCAAAA GTGACG ATACG CGCCAC GCTGGATTCCACGCC cysD 2960058 - 2959150 - | Sulfate adenylyltransferase subunit 2 iap 2960309 - 2961355 + | alkaline phosphatase isozyme conversion protein ygbF 2962279 - 2961983 - | hypothetical protein SEN2777 2963196 - 2962276 - | hypothetical protein TERM 3862 2962571 - 2962560 - G 91 -7.2 -5.00611 | CATAAACAAAAGAAA GCGG CTTA CCGC TATGGATAAAACCGA TERM 3863 2963061 - 2963084 + g 79 -7.4 -4.42386 | opp_overlap 2963061 AAGCGACCGAACCGA CGGGAATATG CGTA CGGATTCCCG TTTTATCGATCAGCA ygcH 2963843 - 2963193 - | hypothetical protein SEN2779 2964571 - 2963825 - | hypothetical protein TERM 3864 2964363 - 2964345 - G 74 -11.6 -3.29511 | overlap 2964346 TGCACCGTGTGATAA TCCCGCGC CCA GCGCGGGT TGCCGCTGGCGCACA TERM 3865 2964362 - 2964346 - G 83 -15.1 -2.57564 | overlap 2964345 GCACCGTGTGATAAT CCCGCGC CCA GCGCGGG TTGCCGCTGGCGCAC yghJ 2965640 - 2964582 - | hypothetical protein SEN2781 2966208 - 2965654 - | hypothetical protein SEN2782 2967761 - 2966205 - | hypothetical protein ygcB 2970436 - 2967773 - | hypothetical protein TERM 3866 2969727 - 2969748 + g 80 -4.3 -5.02074 | opp_overlap 2969743 TTAGCGAGAGCTTGC TGCCAGTAG GTAT CAACAGGCA TTTTTTCCGCAGTAC sopD 2970880 - 2971833 + | possible secreted protein TERM 3867 2971863 - 2971879 + T 89 -9.4 -4.72272 | opp_overlap 2971863 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAACAGCA TERM 3868 2971879 - 2971863 - T 83 -9.4 -4.32804 | opp_overlap 2971863 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAACAGCA cysH 2972655 - 2971921 - | Phosphoadenosine phosphosulfate reductase cysI 2974469 - 2972757 - | sulfite reductase (NADPH) hemoprotein alpha subunit cysJ 2976088 - 2974469 - | sulfite reductase (NADPH) flavoprotein beta subunit ptpS 2976692 - 2977054 + | putative 6-pyruvoyl tetrahydrobiopterin synthase SEN2789 2977939 - 2977142 - | hypothetical protein TERM 3869 2978797 - 2978807 + r 89 -4 -5.67283 | opp_overlap 2978797 TTGATGCAAAAAAGT TCAT AGA ATGA TTTTTTCTTTAAATT ygcF 2979645 - 2978974 - | hypothetical protein TERM 3870 2979048 - 2979060 + g 80 -9.1 -4.09519 | opp_overlap 2979048 ACGTTTCAATACACA GACGC GTC GCGTC TTCTTTCTGGCTAAT TERM 3871 2979592 - 2979576 - G 78 -2.2 -5.24551 | GTAAACGAATAAAAA TAGCGG GGACG CCGGTA AAATAACCCTCGCCT TERM 3872 2979740 - 2979753 + r 100 -9.5 -4.74103 | opp_overlap 2979740 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTTTACATTAAGAG TERM 3873 2979753 - 2979740 - R 100 -9.5 -5.77988 | opp_overlap 2979740 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTTTACATTAAGAG eno 2981079 - 2979781 - | Enolase TERM 3874 2981147 - 2981124 - R 100 -13.9 -4.08164 | opp_overlap 2981122 2981121 AAAACTTCAGACAAA CGGTGCACC GCTGAG GGTGCACCG CCGTTCTAACTTTTT pyrG 2982799 - 2981162 - | CTP synthase mazG 2983827 - 2983027 - | hypothetical protein TERM 3875 2983425 - 2983440 + g 87 -8.2 -4.57073 | overlap 2983428 2983434 GCGGAATATCGTCCA GCGCGG AATG CTGCGC TTTTTGCGCGCGCTC TERM 3876 2984184 - 2984203 + H 91 -8 -5.24531 | CGCCAGTTTAATATT CAAAAAAG ACCG CTTTTTTG TTTTTTCTGGAACAT SEN2794 2984435 - 2985022 + | major fimbrial subunit TERM 3877 2985038 - 2985083 + F 74 -5.4 -4.63932 | opp_overlap 2985049, overlap 2985049 TTCAGTTAACAGAGT CACGACGATAATACCCTGCC GCTTTA GGTAGGGTATTCCTGTTGAG TTTTATTGCGGAATA TERM 3878 2985049 - 2985072 + F 70 -8.9 -3.41203 | opp_overlap 2985049, overlap 2985038 GAGTCACGACGATAA TACCCTGCC GCTTTA GGTAGGGTA TTCCTGTTGAGTTTT SEN2795 2985102 - 2987801 + | outer membrane usher protein TERM 3879 2987973 - 2987963 - g 71 -4.6 -4.59773 | overlap 2987964 CGTCACGCTGAAAAA CGGC AAC GCCA CTCTGCCCTACCTCG SEN2796 2987814 - 2988587 + | periplasmic fimbrial chaperone SEN2797 2988607 - 2989113 + | fimbrial subunit SEN2798 2989110 - 2989598 + | fimbrial subunit SEN2799 2989595 - 2990131 + | fimbrial subunit SEN2800 2990186 - 2991217 + | hypothetical protein relA 2993801 - 2991567 - | GTP pyrophosphokinase TERM 3880 2992707 - 2992724 + g 77 -8.3 -4.1523 | overlap 2992705 ATGACCGGAGCGCAC GCCGCCG GACG CGGCGCC TTCTTTATACTTCCA TERM 3881 2993846 - 2993820 - R 73 -10.9 -2.52464 | gap 1, opp_overlap 2993817 CCTCTCCTTAAGGGA CCAGGCCTACCG AAGT CGGTAAGCC-GG TAATCATTACATGCG ygcA 2995148 - 2993853 - | putative RNA methyltransferase TERM 3882 2995747 - 2995758 + G 85 -2.2 -5.47159 | AGATTTTTATCTCCA GCGT GATG ATGC TTTTTTGTATTGGCA TERM 3883 2996078 - 2996057 - g 71 -4.3 -4.57569 | opp_overlap 2996058, overlap 2996058 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAGTCGGAGTTC barA 2995206 - 2997962 + | sensor protein SEN2804 2999148 - 2998006 - | Glycerate kinase 2 TERM 3884 2999221 - 2999196 - R 100 -17.7 -3.54436 | opp_overlap 2999196 2999199, overlap 2999199 CATACACCCAGAGAA GAACCGGTTCC TTAC GGAACCGGTTC TGACTTAACGCACCA TERM 3885 2999196 - 2999221 + r 100 -17.7 -2.52464 | opp_overlap 2999196 2999199, overlap 2999199 CATACACCCAGAGAA GAACCGGTTCC TTAC GGAACCGGTTC TGACTTAACGCACCA TERM 3886 2999199 - 2999218 + r 90 -13.6 -3.41878 | opp_overlap 2999196 2999199, overlap 2999196 ACACCCAGAGAAGAA CCGGTTCC TTAC GGAACCGG TTCTGACTTAACGCA TERM 3887 2999218 - 2999199 - R 100 -13.6 -3.90092 | opp_overlap 2999199 2999196, overlap 2999196 ACACCCAGAGAAGAA CCGGTTCC TTAC GGAACCGG TTCTGACTTAACGCA gudD 3000566 - 2999226 - | glucarate dehydratase protein ygcY 3001927 - 3000587 - | glucarate dehydratase-related protein TERM 3888 3000671 - 3000683 + g 77 -4.7 -4.84359 | TGCATCATTACGCGC GCCGC CTG GCAGC TTTTTATACGCGTCA TERM 3889 3000757 - 3000770 + g 95 -8.1 -4.98531 | CTGGCGCATCCGGAA CGGCA ATTT TGCCG TTTTTAATTTCCAGC TERM 3890 3001047 - 3001081 + g 83 -15 -2.62184 | overlap 3001043 TGCCCCATTTCGCGC CAGTTGGTGGCGATCA TAT TGGTCGCCACCGGCAG TCCTGTCGCGCGGCG TERM 3891 3001241 - 3001255 + g 95 -5.6 -5.40072 | ATCCACGGTAATACG CGCGTC CGG GAAGCG TTTTTTTAGCGCGCG gudP 3003282 - 3001924 - | glucarate transporter TERM 3892 3002987 - 3002975 - G 85 -9.1 -4.46757 | AAGATATCGACAAAA CCCTG CAA CAGGG TGAAGACTGACCAAA TERM 3893 3003448 - 3003436 - R 74 -3.3 -5.01535 | GGAGAAGTATAAAAA GCGCG CCA CACAC ACTCACCGTGCAACA TERM 3894 3003564 - 3003549 - R 72 -10.4 -2.78901 | overlap 3003548 AAATGAAATCAGAAG GCGTCG GCGT CGACGC AGGAGGAATAAAAAG TERM 3895 3003755 - 3003736 - R 72 -10.7 -2.82666 | opp_overlap 3003735 3003736, overlap 3003733 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA TERM 3896 3003736 - 3003755 + r 72 -10.7 -2.78679 | opp_overlap 3003736 3003733, overlap 3003735 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA SEN2808 3004212 - 3003763 - | hypothetical protein yqcB 3005013 - 3004231 - | putative RNA pseudouridylate synthase yqcC 3005342 - 3005013 - | hypothetical protein TERM 3897 3005267 - 3005244 - G 89 -13.2 -3.53012 | gap 1 TTGGGTGCTGGTAAA CAGG-TGCGCC TGC GGCGCATCCTG CCGCCAGTGGCGATG TERM 3898 3005390 - 3005419 + r 79 -10.7 -3.51411 | opp_overlap 3005392, overlap 3005386 3005391 AAGAATAACAAAAAA AAGGGAGCACTGT ATAA ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 3899 3005391 - 3005418 + r 83 -14.2 -2.70525 | opp_overlap 3005392, overlap 3005390 3005386 AGAATAACAAAAAAA AGGGAGCACTGT ATAA ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 3900 3005417 - 3005392 - R 100 -17.7 -6.22691 | opp_overlap 3005391 3005390 3005386 GAATAACAAAAAAAA GGGAGCACTGT ATAA ACAGTGCTCCC GGTTCGTTTCGCAGC syd 3006499 - 3005954 - | syd protein yqcD 3006568 - 3007416 + | hypothetical protein TERM 3901 3008260 - 3008249 - g 72 -3.6 -4.70659 | CCGGATATCGAAAAA CGCC TGGA AGCG TTCGTCCGTATCGCA ygdH 3007529 - 3008893 + | hypothetical protein TERM 3902 3008899 - 3008927 + F 77 -10.2 -3.3858 | overlap 3008900 3008922 CTGCGCTTAACGCTT ATGCCCGGTTGC CGCCA GCAGCCGGGCGC TTCTCCCATTCCTTT TERM 3903 3008900 - 3008926 + F 83 -13.7 -2.62425 | overlap 3008899 3008922 TGCGCTTAACGCTTA TGCCCGGTTGC CGCCA GCAGCCGGGCG CTTCTCCCATTCCTT sdaC 3009458 - 3010747 + | putative serine transporter TERM 3904 3010756 - 3010774 + F 90 -13.1 -3.61902 | CAGCTAAGTCCTTTA GCGCCGC TTACC GCGGCGC TTCTCTATGATACAA TERM 3905 3010913 - 3010878 - g 83 -10.4 -3.95584 | GTCGGACCAATGAAA GCAGGCAAGCAGTTCA CGGA CGATCTGATTGCCCGC CATATCCTTACAGAT TERM 3906 3011432 - 3011412 - g 86 -11.9 -3.83026 | overlap 3011415 GCTCTGCACAGTAAA GAAGCGCTG GAG CAGCACTTC GCCAGGGTCTGGGAG TERM 3907 3011429 - 3011415 - g 71 -7.8 -4.04806 | overlap 3011412 CTGCACAGTAAAGAA GCGCTG GAG CAGCAC TTCGCCAGGGTCTGG TERM 3908 3011585 - 3011561 - g 95 -14.3 -3.4252 | GGTCAGTCAGGATAA GACCACCACCG ATC CGATGGCGGTC GTCGACTGGATCAAT TERM 3909 3011654 - 3011672 + G 75 -11.7 -2.94726 | opp_overlap 3011631 3011666, overlap 3011650 3011647 3011671 CGGACGAGTAGTCAC TGCGCCG ACTAA CGGCGCA TGTGGTATTGTGCCG sdaB 3010806 - 3012173 + | L-serine dehydratase 2 (L-serine deaminase 2) TERM 3910 3012200 - 3012228 + F 76 -7.5 -4.22375 | gap 2, opp_overlap 3012209, overlap 3012217 3012221 TTTTAGGATCTGTAG GCCGGATAAGGCG CTCGC CGCC--ATCCGGC TTTGTTGCCTGATGT exo 3012283 - 3013098 + | 5'-3' exonuclease TERM 3911 3013081 - 3013098 + T 74 -5.5 -4.63932 | opp_overlap 3013075 GGAAACTTACAGCAG CTACGGC TGGC GCGGTAG TTTTGTTGCCGGATG fucO 3014338 - 3013190 - | 1,2-propanediol oxidoreductase (lactaldehyde reductase) TERM 3912 3013485 - 3013473 - G 77 -7.7 -4.2558 | GACCCGGCATTAAAA CGCAT CAC ATGCG GAAGCAAAATAGCAT fucA 3015002 - 3014355 - | fuculose-1-phosphate aldolase TERM 3913 3014538 - 3014558 + g 76 -9.7 -3.8046 | overlap 3014545 3014546 ACAAGCGATAAGCCC GTGATGCTG TAA CAGCGTCGC TTTACGATTTTTAAG TERM 3914 3015794 - 3015804 + G 74 -6.8 -4.25104 | overlap 3015799 TTTCGTCATTCCAAT TCCC GCT GGGA TTTTGATGAAAAAGC SEN2819A 3015558 - 3016874 + | L-fucose permease TERM 3915 3016927 - 3016916 - g 85 -2.2 -5.52384 | overlap 3016917 3016919 CTGTCATGAAAAAAA TCAG CTTA CCGA AAATCGGTATCCGCC TERM 3916 3017058 - 3017039 - g 79 -7.8 -4.43844 | opp_overlap 3017039 TCATCACCGAGAAAA TGCGCCAC GCCT GTGGGGCA CAAGTGGAGTGCGTC TERM 3917 3017401 - 3017380 - g 74 -2.2 -5.07486 | gap 1 GACGTCGAAGAAAAA CTG-CTGCG TTTTG CGCGGGCAG GGTTAGCGGTAGCCA TERM 3918 3017632 - 3017616 - g 70 -3 -4.82901 | gap 1, overlap 3017618 GTGGGCGGATAAAAA CTTCCGC TACG GCG-AAG ATCAGAACGCCTCGC TERM 3919 3018061 - 3018022 - g 70 -10.1 -3.33261 | gap 3, opp_overlap 3018023 3018060, overlap 3018060 CCGGAAGCCGTAGAA CGCGTCACCGGCCAGG-CGC TCA GCGGCCTGGC-GG-AACACG GCATTATTCACCTGA fucI 3016906 - 3018681 + | L-fuculose isomerase fucK 3018782 - 3020200 + | L-fuculose kinase TERM 3920 3020500 - 3020528 + G 71 -5.9 -4.36914 | TAGAAGCGCCGTGCC CGGATATCGTTCG TAT CGACCGTTATGCG TTTTATGAGCGGGCG fucU 3020202 - 3020624 + | fuscose operon fucU protein TERM 3921 3020620 - 3020610 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CGCC GTAATCTCTTGCCGG TERM 3922 3020638 - 3020656 + F 83 -13.1 -3.17212 | AATCTCTTGCCGGTG CGCCCGC ATGAC GCGGGCG TTCATCGAATGATGG TERM 3923 3021279 - 3021289 + G 75 -6.8 -4.51994 | overlap 3021266 ATCCTGCTCAGGCGT GCCT CGC AGGC TTTATTATTGATTGA fucR 3020682 - 3021392 + | l-fucose operon activator TERM 3924 3021401 - 3021447 + T 100 -15.3 -4.88736 | gap 2, opp_overlap 3021402, overlap 3021402 GTCATAGGCCGGATA AGCG-TGC-GTCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGCG TTTTTATCGCTCGTC TERM 3925 3021446 - 3021402 - T 100 -18.8 -3.30771 | gap 2, opp_overlap 3021401 3021402 TCATAGGCCGGATAA GCG-TGC-GTCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT TERM 3926 3021402 - 3021446 + T 100 -18.8 -3.52519 | gap 2, opp_overlap 3021402, overlap 3021401 TCATAGGCCGGATAA GCG-TGC-GTCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT ygdE 3022551 - 3021451 - | hypothetical protein ygdD 3022939 - 3022544 - | hypothetical protein TERM 3927 3022911 - 3022899 - G 100 -9.1 -4.94058 | overlap 3022901 GCAACGTAAATAAAA CCGCT GAT AGCGG CGACAATCAGCATAA gcvA 3023875 - 3022958 - | regulatory protein for glycine cleavage pathway TERM 3928 3023315 - 3023331 + g 83 -7.9 -4.67168 | overlap 3023330 CAATAACGTGTGTTT CGCCAGA TCT TCCGGCG TTTTTAACGGTTTTT TERM 3929 3023849 - 3023839 - G 74 -4.6 -4.77036 | opp_overlap 3023839 CGGCAGCATCAAAAA CGCG TAA CGCA TTTAAAGGAGGTAAT TERM 3930 3023907 - 3023935 + r 100 -7.5 -5.58454 | opp_overlap 3023907 3023911 GTCGAATGAATTTAA CAAATAGGTAACA ATA TGTAACCTATTAG TTTTTTTAATCTGAG TERM 3931 3023931 - 3023911 - R 74 -6.9 -4.26953 | opp_overlap 3023907, overlap 3023907 AATGAATTTAACAAA TAGGTAACA ATA TGTAACCTA TTAGTTTTTTTAATC TERM 3932 3024181 - 3024200 + r 100 -10.7 -6.02914 | opp_overlap 3024181 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC TERM 3933 3024200 - 3024181 - R 70 -10.7 -2.57423 | opp_overlap 3024181 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC ygdI 3024449 - 3024222 - | possible lipoprotein TERM 3934 3024903 - 3024889 - g 78 -2.1 -5.14563 | CGCCCGATGAAAAAA GTATC GTCTG GACAC GCGGCACCACCGAAG csdA 3024642 - 3025847 + | possible aminotransferase ygdK 3025847 - 3026290 + | hypothetical protein TERM 3935 3026805 - 3026825 + G 76 -3.3 -4.99645 | GATCGCCGGACTTTT GATGATTGT ATC ATGGTCATC TTTTATTTATGCGCT SEN2830 3026563 - 3027477 + | hypothetical protein ygdL 3028335 - 3027529 - | hypothetical protein TERM 3936 3028032 - 3028045 + g 71 -9.5 -3.51708 | overlap 3028029 CATCGATAACCGTTA CCCGG CACT CCGGG TTAATTTGCCGAATC TERM 3937 3028242 - 3028266 + g 78 -7 -4.59773 | opp_overlap 3028241 CCACGACGCAGATAT GCGCCTCAGC AAACC GCTGCAGCGC TTTTTCACCGTACAG TERM 3938 3028374 - 3028356 - R 100 -10.3 -5.88565 | CTCAGAATAAAAAAA GGTGAGG TTATT CCTCACC CCTGCTCACTATTTT TERM 3939 3028467 - 3028479 + r 78 -6.2 -4.56597 | opp_overlap 3028448, overlap 3028467 3028466 CTAAACACGTTACCG GCGC CCGGC GCGC TTTTTAACACCCAGA mltA 3029542 - 3028445 - | membrane-bound lytic murein transglycosylase A precursor TERM 3940 3029083 - 3029104 + g 77 -8 -4.08945 | gap 1 CTGCGTAGATCTGAG CGCGGGACG GTAAG CGTCC-GCG TTTTGGCGGCATACT TERM 3941 3029453 - 3029470 + g 84 -9.1 -4.25104 | CCCGTCCTTATATTG CTGACCG CGAT CGGTCGG TTTTGATGAACAGGC TERM 3942 3029943 - 3029956 + r 100 -8.1 -5.77988 | opp_overlap 3029943 AACCAACTTAATGAA CACCC TTAC GGGTG TTTTTTTGTATCTGT amiC 3031295 - 3030042 - | N-acetylmuramoyl-L-alanine amidase TERM 3943 3031445 - 3031433 - H 78 -5.5 -4.73613 | GCATTACTAAGAAAA GCGAT CGG ACCGC ATAAAATTTACGCTT argA 3031528 - 3032859 + | N-acetylglutamate synthase TERM 3944 3032940 - 3032928 - T 70 -9.1 -3.30124 | TTGGAGGCCGGATAA GACGC TAC GCGTC GCCATCCGGCGAGAA recD 3034797 - 3032962 - | exonuclease V alpha-subunit TERM 3945 3033941 - 3033921 - G 76 -3.2 -5.07486 | gap 1, overlap 3033924 3033925 GATCGCCAAGAAAAA TGAC-CCGC CCGT GCGGCGGCA GAGCGTCAATCAAAC recB 3038339 - 3034794 - | exonuclease V subunit TERM 3946 3035039 - 3035022 - G 72 -11.3 -3.01497 | overlap 3035017 GTACTGCAAATCATA GCGATGC GCCT GCATCGC CGTAGCCATCGCCGC TERM 3947 3037298 - 3037310 + g 100 -10.5 -4.72272 | opp_overlap 3037290, overlap 3037292 CGTCAAACCCCAGCT CGCCG CGC CGGCG TTTTTCCTGAGCCAC TERM 3948 3037421 - 3037442 + g 83 -12.3 -3.74693 | gap 1 CGACAAACAATGGGT GCTGG-GGCG TCA CGCCGCCAGC TTTGGTGCGCTCAGC TERM 3949 3037486 - 3037465 - G 82 -5.1 -5.08824 | opp_overlap 3037480, overlap 3037477 CGCTCAGCTAAAAAA CGCTGTGAA AATT TTCCCAACG CCTCGGGTAATTGAT TERM 3950 3037819 - 3037791 - G 70 -8.8 -3.63627 | gap 1 CTTCCACACGTCAAA CACCACCTGCGCG ATGT CGCGC-GGCAGCG GATAGCAATGACGCC TERM 3951 3038306 - 3038284 - G 71 -8.4 -3.90588 | GATGCTTCAATCAAA CGCTCGCC TGTAAGG GGCAAGCG CAGAGGATCAAGAGT ptr 3041220 - 3038332 - | protease III precursor (pitrilysin) TERM 3952 3039038 - 3039054 + g 71 -4.3 -4.62302 | opp_overlap 3039031 3039028, overlap 3039040 CGACACCACGCCGAT CCGTTCG CCG CGAGCTG TTTTTGGACATCTTG TERM 3953 3039879 - 3039889 + g 81 -6.8 -4.72272 | TCTGCGGCGTCATCA TCGC CAG GCGA TTTTTGATAGCGGCA TERM 3954 3040905 - 3040920 + g 100 -7.6 -5.40474 | overlap 3040896 GGTATTCGGCAAGGC TATCCG CCTG CGGATA TTTTTTTGACCCCAT TERM 3955 3041305 - 3041321 + r 88 -3.7 -5.64274 | AACGGGATATTATTG TGCTG AACCAGG CAGCA TTTTTTTATCAGTAA recC 3044769 - 3041398 - | exonuclease V subunit TERM 3956 3041790 - 3041778 - G 73 -9.1 -3.90048 | overlap 3041776 CTTTGCGCAAAAACA GGCGA CTT TCGCC ACTCCCGCCGCTGGC TERM 3957 3042658 - 3042669 + g 72 -3.6 -4.68593 | overlap 3042625 GCGACGGCTACGATC CCCG CGCA TGGG TTTTTGGCTCATCAG TERM 3958 3043491 - 3043467 - G 72 -12.1 -2.60823 | overlap 3043463 3043471 AAATGGCATAAGGCA GATAGCGCTCC GTT GGCGCGCTACC AAACACCGCCTGGAT TERM 3959 3043797 - 3043813 + g 70 -6.5 -4.19506 | opp_overlap 3043797 3043796 3043799, overlap 3043800 TAATATCAACAAACG CATCCAG CTC CTGGCTG TTTTCCAGTTCAGAT TERM 3960 3044598 - 3044588 - G 74 -6.8 -4.27316 | GCCGGTAACGGAAAA GCGA TAT TCGC CGCAATACCAAACTT ppdC 3045105 - 3044785 - | prepilin peptidase dependent protein C precursor ygdB 3045497 - 3045090 - | hypothetical protein ppdB 3046057 - 3045494 - | prepilin peptidase dependent protein B precursor ppdA 3046518 - 3046048 - | prepilin peptidase dependent protein A precursor TERM 3961 3046224 - 3046192 - G 83 -14.9 -2.77569 | overlap 3046184 3046183 3046217 AAAGAAGGCTAACGA CGGCGTGATATCGGC AAG GACGACATCACGCCA GTCGGGCGTAAACAC TERM 3962 3046681 - 3046662 - R 93 -7.1 -5.81032 | opp_overlap 3046662 GAAGGGTAAAAAAAA CCGACGC GCAATG ACGTCGG TTATGGCAGGATCGT thyA 3047497 - 3046703 - | thymidylate synthetase TERM 3963 3047075 - 3047054 - G 76 -5.1 -4.75063 | gap 1, opp_overlap 3047063 3047064 ATAAAACTGGAAAAA GGCG-TGACA CGG CGCCAGCGCC ATCTTATCCAGCTCG lgt 3048379 - 3047504 - | prolipoprotein diacylglyceryl transferase TERM 3964 3048005 - 3047994 - G 71 -4.4 -4.64334 | AACGGCGCAATAAAA TCAG ACAC CTGA AAGAACGAGCGCTTC TERM 3965 3048453 - 3048429 - R 70 -9.2 -3.37354 | overlap 3048418 GATAGCGATTGATAA GCGCGCCTGC GCGTT GCAGACGCTC CAAAGGTGCGAATAA ptsP 3050841 - 3048595 - | phosphoenolpyruvate-protein phosphotransferase TERM 3966 3050153 - 3050121 - G 83 -6.1 -4.85129 | opp_overlap 3050148 3050150, overlap 3050123 AGTACAGATCAAAAA TGGCCGCCGTCTC TTTTTGC GCGCCGGCGGCAA AGCGTTTGCTGTATC ygdP 3051384 - 3050854 - | hypothetical protein mutH 3052067 - 3052762 + | DNA mismatch repair protein mutH TERM 3967 3053304 - 3053292 - g 71 -7.7 -3.97139 | opp_overlap 3053291 GAAGGCGAAGAAGAA GGGTT AAA AACCC GGGTTTCTTCTTTCC ygdQ 3052944 - 3053657 + | hypothetical protein ygdR 3053827 - 3054045 + | possible lipoprotein TERM 3968 3054326 - 3054316 - g 71 -4.6 -4.63486 | overlap 3054318 ATTTGGTGAACAAAA CAGC GAA GCCG ACGCTCACGCACAGC tas 3054236 - 3055276 + | possible oxidoreductase ygeD 3056565 - 3055363 - | hypothetical protein TERM 3969 3055876 - 3055859 - G 79 -7.7 -4.49311 | gap 1, overlap 3055863 AGCACCAGCAGAAAA CGCA-GCG TCA CGCCTGCG CCCCAGAATAGCCCG aas 3058717 - 3056558 - | 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase TERM 3970 3056959 - 3056969 + g 77 -8.2 -4.07568 | ACCCGCGCTCGGTTT CGCC TCT GGCG TTTTCCGCCGACGGC TERM 3971 3057690 - 3057706 + g 77 -7.9 -4.28254 | ATCCACAGCTTGTCG GCGGGTG TGA CGTCCGC TTTTAAATCTTCCAG TERM 3972 3058833 - 3058816 - H 100 -12.7 -5.75945 | opp_overlap 3058816 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3973 3058816 - 3058833 + H 81 -12.7 -3.14132 | opp_overlap 3058816 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3974 3059037 - 3059018 - H 100 -10 -6.4753 | opp_overlap 3059018 CGAAACAAAAAAAAA CCTGCGCA TCTC TACGCAGG TTGGTGTAATTCGTG TERM 3975 3059413 - 3059391 - g 74 -7.6 -4.10429 | overlap 3059378 AACGATTCGCCAAAA GCCAGCGAAG CGT CCCGGCTGGC GGTGACCAGCGCAAT galR 3059310 - 3060338 + | galactose operon repressor TERM 3976 3060472 - 3060443 - g 74 -4.3 -4.68908 | gap 1 GGCAGGTAAAAGAAA GCACGCGCCAGAAA GTG TTTACGGCG-ATGC AGGCTCTGGGCTATC TERM 3977 3060583 - 3060609 + G 74 -10 -3.72576 | overlap 3060584 TATTTCGGCAGTTTG TTGCGCCGGGCG TCG CGCCAGGCGGAG TTTCATAACAAGCAG TERM 3978 3061329 - 3061350 + G 84 -5.7 -5.03314 | CACGCTGATTCTGCG CGAGTCCGT CGCC GCGGGCCCG TTTTTTCAACGTCCG SEN2855 3060349 - 3061371 + | possible regulatory protein lysA 3062643 - 3061381 - | diaminopimelate decarboxylase lysR 3062761 - 3063696 + | transcriptional activator protein LysR ygeA 3064375 - 3063668 - | hypothetical protein araE 3065906 - 3064488 - | arabinose-proton symporter TERM 3979 3065067 - 3065057 - G 78 -6.8 -4.62069 | overlap 3065040 CGGCCATTTTAAAAA TGCG CGG CGCA TAGTACATAATGATG TERM 3980 3066198 - 3066181 - R 93 -7 -5.69473 | opp_overlap 3066180 3066181 GAGATCATAAAAAAA CCCTGT ACGAGG ACAGGG CTTTATCAGTTTTTT kduD 3067021 - 3066260 - | 2-keto-3-deoxygluconate oxidoreductase TERM 3981 3066871 - 3066849 - G 76 -2.7 -5.03314 | overlap 3066852 GTCAGGCTTAAAAAA CGACGTC-CCA GAG CGGTGACG-CG CGCAATAGTTTCCGT kduI 3067914 - 3067078 - | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase TERM 3982 3067955 - 3067971 + r 81 -8.1 -4.41616 | opp_overlap 3067954 3067955 GCAATGGCATAAAAT TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 3983 3068090 - 3068128 + r 81 -13.2 -2.70275 | opp_overlap 3068091 3068095, overlap 3068087 ACGAACGGCGCTAAA ACTTACGCACATGTCTGA TTT TCAGACATGTGCGCCAGA TGCTGTATGCGGTTA TERM 3984 3068127 - 3068091 - R 100 -18.9 -4.09739 | opp_overlap 3068090 3068087, overlap 3068095 CGAACGGCGCTAAAA CTTACGCACATGTCTGA TTT TCAGACATGTGCGCCAG ATGCTGTATGCGGTT TERM 3985 3068123 - 3068095 - R 100 -20.5 -2.74605 | opp_overlap 3068090 3068087, overlap 3068091 CGGCGCTAAAACTTA CGCACATGTCTGA TTT TCAGACATGTGCG CCAGATGCTGTATGC TERM 3986 3068280 - 3068297 + r 84 -8.4 -4.56775 | TCTGTCACTGGCTTT GCCCTC GTGATA GAGGGC TTTTTACAACGGAAT yqeF 3069523 - 3068345 - | probable acetyl-CoA acetyltransferase TERM 3987 3068706 - 3068693 - G 71 -9.5 -3.54424 | overlap 3068694 GCCGACGCTGGCAAA CGCGC GGAT GCGCG CCAGCACCGGCAGCC TERM 3988 3068858 - 3068822 - G 71 -8.6 -3.89412 | gap 1, opp_overlap 3068851 ACCTAAACTATCAAA CGCCGGATGCAGCAGGG CTAA CCCCTCCGCA-CTGGCG TCGGCCCGCGGTTGT TERM 3989 3069611 - 3069598 - R 76 -2.4 -5.41143 | GATTGTTTAAAAAAA GTGA GTTTTA TCAC AAAGGAAATGACGCT SEN2863 3070509 - 3069646 - | possible regulatory protein TERM 3990 3069754 - 3069768 + g 73 -5.6 -4.56597 | overlap 3069756 CCAGCCAGGAACTTC CAGCTG GGC CAGCGG TTTTTCCGCCGCAAA SEN2864 3070586 - 3071068 + | hypothetical protein SEN2865 3071210 - 3072439 + | probable amino acid transport protein TERM 3991 3072474 - 3072447 - T 90 -9.9 -4.54727 | opp_overlap 3072449, overlap 3072449 TCGGCTAAAGTAAAA GATAGCCGGGA TATAAC TCCCGGCTATT TTATATAAGAATCCA TERM 3992 3072472 - 3072449 - T 95 -12.5 -3.88396 | opp_overlap 3072449, overlap 3072447 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC TERM 3993 3072449 - 3072472 + T 100 -12.5 -4.53303 | opp_overlap 3072449 3072447 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC yohL 3072742 - 3072470 - | hypothetical protein rcnA 3072864 - 3073712 + | putative High affinity Nickel transport protein SEN2868 3074662 - 3073922 - | hypothetical protein TERM 3994 3074420 - 3074408 - G 71 -4.8 -4.56597 | CCGGTCGCTGAAAAA CAGC TCATC GCTG ATAATCATAACCGGG SEN2869 3075179 - 3074667 - | hypothetical protein SEN2870 3076399 - 3075323 - | hypothetical protein TERM 3995 3075383 - 3075396 + g 74 -9.5 -3.73088 | TGTCTTTACACTTCC CCCCG GGGT CGGGG TTATTACTGCAGTAT stdC 3077139 - 3076396 - | probable fimbrial chaperone protein stdB 3079663 - 3077180 - | probable outer membrane fimbrial usher protein TERM 3996 3079753 - 3079728 - R 72 -4.7 -4.61868 | opp_overlap 3079728 CAGTCAGATATAAAA GCCGTCC GATCCCCTCCGT GGACGGC TTCTCCCTGTCGTTA stdA 3080490 - 3079783 - | probable fimbrial protein TERM 3997 3080592 - 3080576 - R 86 -5.1 -5.4593 | opp_overlap 3080580 3080584 3080590, overlap 3080578 3080580 TTAAAACAATAAAAA TAGATCG ATA CGATCGA TGATTATGATCGTAA TERM 3998 3080590 - 3080578 - R 76 -7.7 -4.32946 | opp_overlap 3080580 3080584, overlap 3080576 3080580 AAAACAATAAAAATA GATCG ATA CGATC GATGATTATGATCGT SEN2874 3081715 - 3081083 - | hypothetical protein TERM 3999 3081298 - 3081313 + g 90 -4.6 -5.42131 | CGCCTGCTAGTTTCA GGGCCT CTAT AGTCCC TTTTTTATCTCCTTC SEN2875 3082298 - 3081762 - | outer membrane protein (associated with virulence) SEN2876 3082845 - 3082480 - | hypothetical protein TERM 4000 3082896 - 3082876 - R 100 -11.9 -5.99154 | opp_overlap 3082879 CAGGAAACAAAAAAA GAAGGGAGC GGT ACTCCCTTC GTAAACATGTCAGAA SEN2877 3083504 - 3083106 - | hypothetical protein (associated with virulence) TERM 4001 3083401 - 3083375 - G 83 -12.4 -3.62096 | TTTCAGCACCGTAAA TCAGCTCCATTA AGG TGATGGAGCTGA TACACATTCGGGATG SEN2878 3083731 - 3083504 - | hypothetical protein (assiciated with virulence) TERM 4002 3083746 - 3083768 + H 70 -9.3 -3.35679 | TAACTGCCTCCTTTC TGGATATAC AACGC GTATATCCA TTATGAGTAGAGGCG SEN2879 3083940 - 3084191 + | endonuclease TERM 4003 3085112 - 3085085 - g 77 -4.1 -5.12617 | GAACCACCTAAAAAA CGGGGATTATA TCGGTG TCTACTCCCCG CTTGACGGGCTGGAC SEN2880 3084471 - 3085277 + | hypothetical protein SEN2881 3086320 - 3085562 - | possible lipoprotein TERM 4004 3086002 - 3086019 + g 72 -4.1 -4.76123 | opp_overlap 3085988, overlap 3085986 3086001 ATGACGGTCTGACCG CAGCAGT TTTT GTTGCTG TTTTATTGCTGGTTT TERM 4005 3086540 - 3086563 + H 84 -8.1 -4.67038 | opp_overlap 3086540 GATCGTCTGAGTATA TGGCCTGGC CATGCT GCCGGGTCA TTTTAATTTTCAGGA TERM 4006 3086764 - 3086753 - g 71 -5.8 -4.24342 | TCGCTGAGCAAGAAA GCCT GGCC AGGC GTGTGGACGAATTCG idi 3086585 - 3087130 + | Isopentenyl-diphosphate delta-isomerase TERM 4007 3087159 - 3087205 + T 74 -8.2 -3.90744 | gap 3, opp_overlap 3087162 3087164 3087166, overlap 3087165 3087166 GCGCTACGTCTGAAC GAAG-AGA-TGCCGGATGGCGGC TAAT GCC-CCATCCGGCAATTTACATC TTATTTCACCGGACG TERM 4008 3087198 - 3087164 - T 74 -10.7 -3.24032 | gap 1, opp_overlap 3087159 3087165 3087166, overlap 3087162 3087166 ACGTCTGAACGAAGA GATGCCGGATGGCGGC TAAT GCC-CCATCCGGCAAT TTACATCTTATTTCA TERM 4009 3087165 - 3087197 + T 100 -14.2 -3.82865 | gap 1, opp_overlap 3087164 3087162 3087166, overlap 3087159 3087166 CGTCTGAACGAAGAG ATGCCGGATGGCGGC TAAT GCC-CCATCCGGCAA TTTACATCTTATTTC TERM 4010 3087196 - 3087166 - T 100 -17.7 -3.18366 | gap 1, opp_overlap 3087166 3087165 3087159, overlap 3087164 3087162 GTCTGAACGAAGAGA TGCCGGATGGCGGC TAAT GCC-CCATCCGGCA ATTTACATCTTATTT TERM 4011 3087166 - 3087196 + T 100 -17.7 -2.88634 | gap 1, opp_overlap 3087164 3087162 3087166, overlap 3087165 3087159 GTCTGAACGAAGAGA TGCCGGATGGCGGC TAAT GCC-CCATCCGGCA ATTTACATCTTATTT lysS 3088723 - 3087206 - | Lysyl-tRNA synthetase prfB 3089614 - 3088733 - | peptide chain release factor 2 (RF-2) TERM 4012 3088792 - 3088826 + g 80 -12.3 -3.44848 | gap 1, overlap 3088789 3088791 TACCGTCCAGTACCG CCTGTGTATTGCGGGT TTCC ACCC-CAGTACGCAGG TCTTTAATGCGGGAA TERM 4013 3089642 - 3089656 + r 71 -7.1 -4.07885 | overlap 3089623 ATCGACGATCGCTTC GAGCG ATGAA CGCTC TTTTCCCAGCGCCTG TERM 4014 3089824 - 3089838 + r 72 -2.8 -4.96996 | TTCACCGGGTTAATT TCAAAC ATG GTCTGA TTTCTTTTATTTGAC TERM 4015 3089899 - 3089874 - R 70 -9.1 -3.30903 | opp_overlap 3089874 3089873 AAAATGCGGTTATAA GGGCGAAAT ATTAGCGG ATTTCGCCC CTTAATTACAGCGAA recJ 3091669 - 3089936 - | single-stranded DNA-specific exonuclease TERM 4016 3091036 - 3091008 - G 71 -9.6 -3.5393 | gap 1 AGCAGCTCCGCCAAA TTCGGCG-GCGCA ATGT TGCGCTCGTCGAA CCATCCTTTGTCGCG dsbC 3092337 - 3091675 - | thiol:disulfide interchange protein TERM 4017 3091871 - 3091884 + g 77 -3.8 -5.0707 | overlap 3091878 CCCTTACCTGCCATG GCGT CATCAA ACGC TTTGTTTTTGTCTTT TERM 4018 3091878 - 3091888 + g 81 -4 -5.19879 | overlap 3091871 CTGCCATGGCGTCAT CAAA CGC TTTG TTTTTGTCTTTGGCG xerD 3093308 - 3092412 - | site-specific integrase/recombinase TERM 4019 3093079 - 3093066 - G 75 -5.9 -4.59109 | CAGATGCTGGAAAAA GCGCC GCAT AGCGC TTAACAGGCGTGCGG fldB 3093421 - 3093942 + | flavodoxin II TERM 4020 3093971 - 3093994 + T 85 -12.4 -3.37245 | opp_overlap 3093976 GTACTTCCCTCTCGA CGGAACCGCG TTTA CGCCGTTCCG TTAGTGTTGGCCTGA ygfX 3094408 - 3093995 - | hypothetical protein ygfY 3094655 - 3094389 - | hypothetical protein ygfZ 3094905 - 3095885 + | hypothetical protein TERM 4021 3095941 - 3095899 - T 83 -9.9 -4.16279 | gap 2, opp_overlap 3095897 3095899 3095901 GATATCACGTTAAAA GC-CG-GATAGCCTGATAGCG CAA CGCCATCAGGCTCGCACGTGC TGTTCTCGTAGGCCG yqfA 3096660 - 3096001 - | hypothetical protein TERM 4022 3096488 - 3096471 - G 80 -4.8 -5.10461 | TTGAGGCAAGAAAAA GCAGGA TCATGC TCCCGC CATATAAACTGTAGC yqfB 3097135 - 3096824 - | hypothetical protein bglA 3097293 - 3098726 + | 6-phospho-beta-glucosidase TERM 4023 3098734 - 3098761 + T 75 -9.8 -3.55548 | overlap 3098735 3098752 AGCTTTAACTCCTGC ACGTTACCCGCC AGTC GGCGGGTAACAC TTTGAACGAGTCTTA TERM 4024 3098735 - 3098760 + T 81 -13.3 -2.73007 | overlap 3098734 3098752 GCTTTAACTCCTGCA CGTTACCCGCC AGTC GGCGGGTAACA CTTTGAACGAGTCTT SEN2895 3099667 - 3098774 - | hypothetical protein TERM 4025 3098955 - 3098968 + g 78 -2.3 -5.26875 | TGGTTATTAATTACG CTGCC ATTA GACAG TTTTTTCGTTCCAGA TERM 4026 3099345 - 3099361 + g 70 -5.1 -4.5032 | overlap 3099346 CCCTCTATGTGCTCA GGAGACA GAT TGTCTCG TTTGTTATTGATATA TERM 4027 3099904 - 3099888 - R 71 -3.7 -4.76892 | overlap 3099892 ACAGCAAGGTAAAAA TGATGCA CAA TGAATCA TTAGGCTCTAAAAAA TERM 4028 3100097 - 3100084 - R 87 -9.5 -4.24123 | opp_overlap 3100084 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAAACAGTCG TERM 4029 3100084 - 3100097 + r 75 -9.5 -3.53444 | opp_overlap 3100084 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAAACAGTCG gcvP 3102996 - 3100123 - | glycine dehydrogenase (decarboxylating) gcvH 3103548 - 3103159 - | glycine cleavage system H protein gcvT 3104668 - 3103574 - | glycine cleavage system T protein TERM 4030 3104635 - 3104610 - G 71 -6.1 -4.28548 | gap 1, opp_overlap 3104611 3104623, overlap 3104611 3104614 ATCCAGCCATGAAAA TCGACCATGCGG GCG CCGCATAG-CGT GTGTTGTTCGTACAA visC 3106325 - 3105123 - | possible monooxygenase TERM 4031 3105851 - 3105875 + g 77 -8.6 -4.13767 | gap 1, opp_overlap 3105853, overlap 3105869 CCGCGGCAATCACCA GAC-GCGCGGT TAAC ATCGCGCCGTC TTTTAAAGTCAGGAA ubiH 3107629 - 3106451 - | 2-octaprenyl-6-methoxyphenol hydroxylase pepP 3108768 - 3107626 - | proline aminopeptidase II TERM 4032 3108892 - 3108870 - R 70 -9 -3.34398 | opp_overlap 3108870 3108870 3108873, overlap 3108868 3108871 3108873 CCGGCGCGGCAAAGA TCAGCGCGGC GCT GCCGGGCTGC ATTTGCGCCAGTAAT TERM 4033 3108891 - 3108871 - R 78 -12.5 -2.60496 | opp_overlap 3108870 3108870 3108873, overlap 3108870 3108868 3108873 CGGCGCGGCAAAGAT CAGCGCGGC GCT GCCGGGCTG CATTTGCGCCAGTAA TERM 4034 3108942 - 3108960 + r 85 -3.8 -5.5353 | overlap 3108943 ATTCCTGCTGAGTCA TGACATGG CCT CCATTTCG TTTTTTCTTAGTGTA ygfB 3109546 - 3108968 - | hypothetical protein TERM 4035 3109226 - 3109214 - G 77 -4.8 -4.87291 | GAGGCCAAGCAAAAA GTGG TTAAC CCAC CCGGCTAAGGCATCT TERM 4036 3109310 - 3109294 - G 70 -2.9 -4.72486 | opp_overlap 3109298, overlap 3109298 3109300 GATAAAGCTGAAAAA GAAAGCC GTC GTCTTCC AGCGCGTCGCTGGTC TERM 4037 3109334 - 3109298 - G 80 -5 -4.88293 | opp_overlap 3109298 3109313, overlap 3109294 3109300 AAGCTGAAAAAGAAA GC-CGTCGTCTTCCAGCG CGT CGCTGGTCGCCG-CGTGC ATTTTGCGCAGCGCC TERM 4038 3109931 - 3109920 - g 72 -3.6 -4.77157 | overlap 3109927 3109928 TTAACTCAGGAAAAA GCGA AGAC CCGC GATTACGCGGCGAGC ygfE 3109713 - 3110042 + | hypothetical protein ygfA 3110408 - 3110884 + | hypothetical protein TERM 4039 3111055 - 3111074 + T 83 -10.7 -3.71649 | overlap 3111070 CCTTTCCTTTTTAGA GCCCCTG CTTCGC CAGGGGC TTTCCCGTTTCAGCG TERM 4040 3111232 - 3111253 + T 86 -11.6 -3.54459 | opp_overlap 3111230 3111229 3111232 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG TERM 4041 3111253 - 3111232 - T 78 -11.6 -3.0955 | opp_overlap 3111232, overlap 3111230 3111229 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG serA 3112497 - 3111265 - | D-3-phosphoglycerate dehydrogenase rpiA 3113423 - 3112764 - | Ribose-5-phosphate isomerase A TERM 4042 3113988 - 3113962 - g 80 -9.5 -3.92592 | gap 2 AGGTGGAAGATGAAA CGCGCACGCAAGA ACG TCT-GCG-GCGCG GCGAGGTGGTGGGCG iciA 3113577 - 3114470 + | Chromosome initiation inhibitor TERM 4043 3114730 - 3114705 - T 75 -6.7 -4.39828 | overlap 3114706 3114707 AACACCGGGAGAAAA TGCGGCCTGGA AGCG CCCAGGCCGGG CGAGATTACTGCGTG TERM 4044 3114729 - 3114706 - T 74 -10.2 -3.23174 | overlap 3114705 3114707 ACACCGGGAGAAAAT GCGGCCTGGA AGCG CCCAGGCCGG GCGAGATTACTGCGT TERM 4045 3114728 - 3114707 - T 83 -13.7 -2.53422 | overlap 3114706 3114705 CACCGGGAGAAAATG CGGCCTGGA AGCG CCCAGGCCG GGCGAGATTACTGCG yggE 3115482 - 3114736 - | hypothetical protein TERM 4046 3115303 - 3115327 + g 83 -12.8 -3.19371 | overlap 3115300 GGCCTGCTTCTTCGC CGTCGCCGCG TCCTT CGCCGCGACG TTCACTTCAATCGCT yggA 3116211 - 3115576 - | possible membrane transport protein yggB 3117272 - 3116412 - | hypothetical protein TERM 4047 3116534 - 3116545 + g 71 -5.8 -4.25104 | CCCAGTAGACATTTT GCAG GTCG CTGC TTTTACTCCAGACAC TERM 4048 3117485 - 3117466 - R 100 -12.2 -5.73339 | opp_overlap 3117466 ATAACGATAAAAAAA TGGCTTCC CAAG GGAAGCCA TTTCAATCAGCAGAC TERM 4049 3117466 - 3117485 + r 88 -12.2 -3.64703 | opp_overlap 3117466 ATAACGATAAAAAAA TGGCTTCC CAAG GGAAGCCA TTTCAATCAGCAGAC fba 3118584 - 3117505 - | fructose 1,6-bisphosphate aldolase TERM 4050 3118635 - 3118622 - R 72 -3.1 -5.00616 | gap 1, overlap 3118625 GGCTTTGGGAAAAAA CACGGG CCG CCC-TG AATGTCAGATCGGCG TERM 4051 3118682 - 3118656 - R 80 -9.5 -3.87373 | gap 1, opp_overlap 3118656 3118679, overlap 3118660 CAGATCGGCGATAAA TCAACGGGCAGG AATC CCTGCCCGT-AA CGATTACTTCTTAGC TERM 4052 3118679 - 3118660 - R 100 -15 -3.6053 | opp_overlap 3118656, overlap 3118656 TCGGCGATAAATCAA CGGGCAGG AATC CCTGCCCG TAACGATTACTTCTT pgk 3119849 - 3118686 - | Phosphoglycerate kinase TERM 4053 3119445 - 3119465 + g 76 -3.2 -5.00616 | opp_overlap 3119445 GGCGTCCATCACGAA TACGTCAC ACAGG GCGGCGTA TTTTTTAGACAGCGC TERM 4054 3119473 - 3119489 + g 74 -4.3 -4.69559 | GCGGCGTATTTTTTA GACAGCG CTT CGTCGTC TTTCTTTTCGCCTTT TERM 4055 3119814 - 3119804 - G 72 -2.4 -4.87665 | opp_overlap 3119812 CCGCACGGATAAAAA CGCG TTT CCCG GCCAGATCCAGATCG epd 3120917 - 3119871 - | D-erythrose 4-phosphate dehydrogenase TERM 4056 3120528 - 3120515 - G 71 -4.5 -4.62069 | overlap 3120516 GGTTCACGCCAAAAA CGACG GTGG CGTCA AGATCGTTGCTGCCC SEN2914 3121291 - 3121716 + | hypothetical protein TERM 4057 3121953 - 3121985 + G 80 -12 -3.40299 | GGCTGCTTACCGACC CTATCGCTGCCGCG TTTGC CCCGGTAGCGATGG TTATCGGTCTGGTCG SEN2915 3121742 - 3122320 + | hypothetical protein SEN2916 3122321 - 3123028 + | hypothetical protein TERM 4058 3123059 - 3123074 + G 71 -4.6 -4.55798 | TTCCGTCCGATGCGA CACGCC CGCC GGCATG TTTTGATTTCCACTA SEN2917 3123016 - 3123693 + | possible ABC-transport protein, ATP-binding component TERM 4059 3124236 - 3124287 + G 83 -15.4 -2.53903 | gap 3, opp_overlap 3124249, overlap 3124246 3124246 3124249 3124268 CTGGCGACATGCCGG GCACGGG-GAAC-CAGCGTCGTGGC GATTA GCCATGACGCTGCGTTTACCCG-GC GTCATTTTTCACGGG TERM 4060 3124246 - 3124277 + G 85 -13.1 -3.5393 | gap 1, opp_overlap 3124249, overlap 3124236 3124246 3124249 3124268 GCCGGGCACGGGGAA C-CAGCGTCGTGGC GATTA GCCATGACGCTGCG TTTACCCGGCGTCAT TERM 4061 3124246 - 3124276 + G 79 -13.3 -2.72144 | opp_overlap 3124249, overlap 3124246 3124236 3124249 3124268 GCCGGGCACGGGGAA CCAGCGTCGTGGC GATTA GCCATGACGCTGC GTTTACCCGGCGTCA TERM 4062 3124249 - 3124273 + G 78 -13.6 -2.64155 | opp_overlap 3124249, overlap 3124246 3124246 3124236 3124268 GGGCACGGGGAACCA GCGTCGTGGC GATTA GCCATGACGC TGCGTTTACCCGGCG TERM 4063 3124268 - 3124291 + G 89 -8.8 -4.58663 | opp_overlap 3124249, overlap 3124249 3124246 3124246 3124236 CGTGGCGATTAGCCA TGACGCTGCG TTTA CCCGGCGTCA TTTTTCACGGGTGGT SEN2918 3123687 - 3124343 + | possible ABC-transport protein, ATP-binding component TERM 4064 3124367 - 3124348 - T 100 -15 -5.56673 | opp_overlap 3124348 AGGGAGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA TERM 4065 3124348 - 3124367 + T 100 -15 -4.42619 | opp_overlap 3124348 AGGGAGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA tktA 3126378 - 3124387 - | transketolase TERM 4066 3125558 - 3125616 + g 83 -9.5 -4.15044 | gap 2, overlap 3125555 3125559 CAGCCCAACTGTTCG C-GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCCTG TTTGTTCGGCGAACC TERM 4067 3125559 - 3125614 + g 89 -13.2 -3.6761 | gap 1, overlap 3125555 3125558 AGCCCAACTGTTCGC GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCC TGTTTGTTCGGCGAA TERM 4068 3126849 - 3126838 - g 73 -5.8 -4.38313 | overlap 3126831 3126839 ACAGCAAAGCGAAAA TCGC GCCG GCGA GCAGCGAATACGCTA TERM 4069 3127211 - 3127188 - g 71 -4.6 -4.57073 | gap 1, overlap 3127190 GATCTTGGCGAAAAA CT-GGTGAACT CGC AGTTCTCCCAG CGTCAGGAGTCCGAA yggG 3126654 - 3127412 + | hypothetical protein speB 3128433 - 3127513 - | Agmatinase TERM 4070 3128088 - 3128100 + g 71 -4.8 -4.59773 | AGAGCATACGCTTGC CTGC AGACA GCAG TTTTTCAGCGTGCGC TERM 4071 3128467 - 3128499 + r 84 -10.5 -3.96542 | opp_overlap 3128467, overlap 3128461 GTCAATATAAAAAAA CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG TTTGAATTTGTTTAC TERM 4072 3128499 - 3128467 - R 100 -12.7 -5.80817 | opp_overlap 3128461 3128467 GTCAATATAAAAAAA CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG TTTGAATTTGTTTAC TERM 4073 3129514 - 3129501 - R 73 -2.5 -5.20333 | TATTGATAATAAAAA TAAAT GCTA ATTTA AAAATATGATTCATA TERM 4074 3129529 - 3129519 - R 73 -4 -4.74504 | ATGCTAATTTAAAAA TATG ATT CATA ACACCTCGCCAATCA TERM 4075 3129696 - 3129664 - R 100 -11.3 -4.79756 | opp_overlap 3129643 TACAGAACGTAAAAA GCCTTTCCGCGATTA GCC TCAACGCGAAAAGGC TCTGAAGTCAGAAAA SEN2923 3130281 - 3129787 - | hypothetical protein SEN2924 3131327 - 3130320 - | putative oxidoreductase TERM 4076 3130873 - 3130863 - G 71 -8.2 -3.86897 | overlap 3130864 GTTAGTCCCCAGAAA GCGC TCC GCGC CGCCATACGGCGCAA SEN2925 3132357 - 3131341 - | zinc binding dehydrogenase SEN2926 3133832 - 3132360 - | putative oxidoreductase TERM 4077 3133220 - 3133240 + g 74 -6.7 -4.26903 | opp_overlap 3133219 GCGGATCGAGATTAT CGGCAAACG TAA CGATCGCCG TTTTGGTCAAATGAC TERM 4078 3133913 - 3133888 - R 70 -4.7 -4.38774 | overlap 3133889 AACAGCATACCAAAA TCCGTGAATAT GATC ACACTCACGGC ACCGGGTTCTTCACC TERM 4079 3134114 - 3134102 - R 76 -4.9 -4.81734 | AAACACCATGAAAAA CAATA CCT TATTG AATAGCACGCCCGCT TERM 4080 3134405 - 3134395 - R 72 -5.4 -4.42806 | GCACGTTGAAACAAA GCTT TCA AAGC CCCTCTGGCCAAGGT SEN2928 3135855 - 3135055 - | putative GntR-family regulatory protein TERM 4081 3135083 - 3135110 + g 71 -4.2 -4.58663 | gap 1, opp_overlap 3135077 3135083 AAAAAATCATCAAAA TCTTCCAGC-GAA TCA TCCTGTTGGAAGA TTTTTACCAGCTCAT SEN2929 3136740 - 3136009 - | putative outer membrane lipoprotein TERM 4082 3136865 - 3136838 - R 100 -15.8 -4.94487 | TTATAAAATATAAAA GGGTCGATTTAA ATAA TTAAATCGACCC ACAAGCGGAATACTC speA 3138798 - 3136885 - | Biosynthetic arginine decarboxylase TERM 4083 3138002 - 3137987 - G 77 -8.2 -4.21142 | overlap 3137988 AGCTCAACATAGAAA CGCGCG GACT CGCGCA CGCCGGTCGCGATAT yqgB 3139001 - 3138870 - | hypothetical protein TERM 4084 3139077 - 3139060 - R 75 -6.3 -4.52703 | opp_overlap 3139072, overlap 3139050 GAAACCACGAGAAAA CTCTTGC GTTA ACAAGAG CGCCCTTGTTCAGTC TERM 4085 3139314 - 3139338 + r 70 -5 -4.52589 | gap 1, overlap 3139318 ACCCGGCTGGAAGTG GCGACACGAAG AAAA CGTCGTGT-GC TTTTGTATGAGCCGC yqgD 3139595 - 3139296 - | putative inner membrane protein TERM 4086 3139351 - 3139361 + g 81 -8.2 -4.36914 | TGCTTTTGTATGAGC CGCG CGT CGCG TTTTATACCCAGAAC TERM 4087 3140127 - 3140115 - g 83 -7.7 -4.59853 | opp_overlap 3140115, overlap 3140117 TGAAGTGCGTAAAAA TGGCA CCC TGCCA TGGTTGCGTCCGGAT TERM 4088 3140784 - 3140770 - g 74 -7.8 -4.11869 | GAAAAAACCGACAAA GCGCAA CTG CTGCGC GATGCTGCCGGTCTG metK 3139651 - 3140805 + | S-adenosylmethionine synthetase TERM 4089 3140860 - 3140878 + F 95 -12.4 -4.08546 | opp_overlap 3140860 TACCGTACTTATCAA GGCCAGCG CCC TGCTGGCC TTTATCATTGCTGAT TERM 4090 3140878 - 3140860 - f 79 -11.7 -3.18582 | opp_overlap 3140860 TACCGTACTTATCAA GGCCAGC GCCCT GCTGGCC TTTATCATTGCTGAT TERM 4091 3141561 - 3141548 - g 84 -3.1 -5.40072 | gap 1 TGGGTCGTAAAAAAA GCCTGA TGA TC-GGC GCTATCCTGTTCGTC galP 3141298 - 3142692 + | galactose-proton symport (galactose transporter) TERM 4092 3142701 - 3142727 + F 100 -21 -5.08601 | CGACTAATCCCTCCA CGCTTCCTCCTG CCA CAGGAGGAAGCG TTTTTCTTGCAGTCC SEN2935 3142771 - 3143268 + | hypothetical protein TERM 4093 3143387 - 3143408 + G 80 -8.7 -4.07568 | TAATTTTTCTTTTGC CGCTGCG TTGCTGGC CGCAGCG TTTTCAGGCCAGGCC endA 3143364 - 3144071 + | endonuclease I TERM 4094 3144564 - 3144528 - g 77 -3.6 -5.06816 | gap 1, overlap 3144529 3144530 ACGTCTGAACAAAAA GC-GCCAGCAGTGGCAA AAGA TCGCCATCGCCGCCTGC GAACAATGCGGGCGT yggJ 3144100 - 3144879 + | hypothetical protein TERM 4095 3145392 - 3145406 + G 74 -7.8 -4.14392 | AACCGCTGGACGGTA TGGGCG GCG CGTCCA TTTTCCGCGTTAAGG gshB 3144899 - 3145846 + | Glutathione synthetase yqgE 3146062 - 3146625 + | hypothetical protein TERM 4096 3146677 - 3146665 - g 70 -3.3 -4.83169 | ACTTCGGCACAAAAA GCATC GGC GTTGC AATAGGACAACGCAT TERM 4097 3146813 - 3146775 - g 71 -9.5 -3.53761 | GAACGTTTGCTGAAA GAGTGGCAGCCGGACGA AATTA TTGTCGGGCTACCGCTC AATATGGATGGCACT yqgF 3146625 - 3147041 + | hypothetical protein SEN2941 3147774 - 3147088 - | probable global regulatory protein yggR 3148886 - 3147906 - | Type II secretion, ATP-binding, protein TERM 4098 3148338 - 3148320 - G 72 -11.6 -3.06183 | GGGATCTTCACGTAA CGCCGCGC GCA GCCCGGCG GCAAAAGTGGCGCAA TERM 4099 3148669 - 3148645 - G 78 -13.5 -2.52896 | overlap 3148604 TGATGTGTGAACGCA CTGGCGCGCAG GCG CCGCGTGCCAG ACAGCGAGACGGCGA TERM 4100 3148961 - 3148947 - g 70 -5.6 -4.38154 | opp_overlap 3148949, overlap 3148949 ACATCCGGGACAAAA TCTCCG CCG CGGCGA CGCGTTGCGGCCGCT TERM 4101 3149037 - 3149018 - g 71 -5.7 -4.23781 | overlap 3149019 GTGAGTAAAACCAAA CCTGCGA GCGACA TCGCAGA AGCCATTGCCGCCGG TERM 4102 3149130 - 3149100 - g 74 -2.5 -5.00884 | opp_overlap 3149087, overlap 3149087 3149101 AGGGGGTGGAAAAAA TCCGCCACTTTCA GGAAG CGAAAGTGGAAGG CCTGCACTGGCACTT yggS 3148904 - 3149608 + | hypothetical protein yggT 3149627 - 3150193 + | hypothetical protein yggU 3150190 - 3150480 + | hypothetical protein TERM 4103 3150542 - 3150555 + G 70 -6.7 -4.21098 | opp_overlap 3150527, overlap 3150527 GTGCGCGAGCTCGCG TCGCT GTTA AGCGA TTTTGGGCTTGATGT TERM 4104 3151048 - 3151020 - g 91 -3.7 -5.4505 | opp_overlap 3151047, overlap 3151022 3151044 CCCGTGAAGAAAAAA GCGCGATTTCCCA CCG TGGACAAGCGCTC AAGCTGCTGCTGGAT yggV 3150488 - 3151081 + | hypothetical protein TERM 4105 3152148 - 3152171 + G 73 -5.3 -4.6644 | opp_overlap 3152133 3152155 TGCGAGCAATACTGG CAGATTACC CGGCAC GGTAAACTG TTTTTAAACTCTCTT yggW 3151074 - 3152210 + | possible oxygen-independent coproporphyrinogen III oxidase TERM 4106 3152265 - 3152214 - T 95 -12.5 -3.9461 | gap 3, opp_overlap 3152264, overlap 3152215 3152217 CTCGCGGAATAACAA GGATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA-CC GACCTGTGGCGGTTA TERM 4107 3152265 - 3152215 - T 88 -14.9 -2.96444 | gap 2, opp_overlap 3152264, overlap 3152214 3152217 TCGCGGAATAACAAG GATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTACC GACCTGTGGCGGTTA TERM 4108 3152263 - 3152217 - T 85 -13.9 -3.03309 | gap 2, overlap 3152214 3152215 GCGGAATAACAAGGA TAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA CCGACCTGTGGCGGT yggM 3153308 - 3152301 - | hypothetical protein TERM 4109 3152759 - 3152770 + g 74 -4.4 -4.77165 | CGTCCGCTTCTTTTT TAGC TACC GCTA TTTTCTTATCCAGGG TERM 4110 3153174 - 3153209 + g 70 -7 -4.2142 | gap 1, opp_overlap 3153176 TAAGGTAATGGAATC CAGTTTAAGTATGCCGT GGT ACTGCTTAC-TAAACTG TTCTTTTAAGATGTT TERM 4111 3153434 - 3153410 - R 93 -10 -4.57073 | gap 1, opp_overlap 3153411 3153412, overlap 3153412 GAGGTCTTCCAAAAA TAGCCCCGGCC TTCC GACCGGGGC-A TTATCATTAATACTG TERM 4112 3153411 - 3153434 + r 72 -9.4 -3.54743 | opp_overlap 3153410 3153412, overlap 3153412 AGGTCTTCCAAAAAT AGCCCCGGCC TTCC GACCGGGGCA TTATCATTAATACTG TERM 4113 3153412 - 3153433 + r 81 -12.9 -2.72364 | opp_overlap 3153412 3153410, overlap 3153411 GGTCTTCCAAAAATA GCCCCGGCC TTCC GACCGGGGC ATTATCATTAATACT TERM 4114 3153433 - 3153412 - R 100 -15.1 -3.90048 | opp_overlap 3153411 3153412, overlap 3153410 GGTCTTCCAAAAATA GCCCCGGCC TTCC GACCGGGGC ATTATCATTAATACT ansB 3154487 - 3153441 - | L-asparaginase TERM 4115 3153793 - 3153773 - G 71 -7.5 -3.95073 | TCGCATAGTTATAAA CGATACCGA CTT TCGGCAACG CGGTCAGCTTCGACA TERM 4116 3154635 - 3154657 + r 95 -12 -3.90744 | opp_overlap 3154636, overlap 3154636 AAAAACAGAATAAAA AGGCGCAGAT ACG ATCTGCGCCA TTGTTTAAAAAGGAA TERM 4117 3154656 - 3154636 - R 100 -15.5 -5.35365 | opp_overlap 3154636 3154635 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTGCGCC ATTGTTTAAAAAGGA TERM 4118 3154636 - 3154656 + r 93 -15.5 -2.94232 | opp_overlap 3154636, overlap 3154635 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTGCGCC ATTGTTTAAAAAGGA yggN 3155395 - 3154676 - | hypothetical protein TERM 4119 3155417 - 3155436 + r 73 -10.6 -3.03203 | opp_overlap 3155416 3155415 CCCTCAAGACAAAGC GGGCCGGC ATTT GCCGACCC TGTACTTATTAGTCC yggL 3155771 - 3155445 - | hypothetical protein TERM 4120 3155593 - 3155609 + g 70 -6.5 -4.18488 | CAGGCCAGGTAGCCG CTGCCGT CAA ACGCCAG TTTATTAGGCTCAAT yggH 3156490 - 3155771 - | hypothetical protein TERM 4121 3156121 - 3156149 + g 74 -7.3 -4.08394 | TTTTATGCAACACTT CTACCGCGTCGTG GCA CATGACGCGCAGG TTTTCAACGCCCTCT TERM 4122 3157159 - 3157180 + G 74 -6.5 -4.25283 | gap 1, opp_overlap 3157159 TGAGCGAGCAAGTGA CGCCCGCACG CGG CGTG-GAGCG TTTTAATCAGGCGAT mutY 3156645 - 3157697 + | A/G-specific adenine glycosylase TERM 4123 3157908 - 3157886 - g 77 -4.1 -4.99861 | GATTAACGAGAAAAA GCTCAACAT GATGA ACGCCGAGC ACCGTAAGCTGCTGG yggX 3157725 - 3158000 + | hypothetical protein TERM 4124 3158617 - 3158600 - g 80 -9.1 -4.08945 | opp_overlap 3158614, overlap 3158601 3158612 ATTACTTGCTGAAAA CGCGGCT CAAA AGCCGCA GTAACGGCCTGCGTA mltC 3158113 - 3159198 + | membrane-bound lytic murein transglycosylase C TERM 4125 3160680 - 3160731 + T 95 -14.7 -3.51708 | gap 2, overlap 3160681 CATTAATCCTTGCCC TGTT-TC-GCAGGCCGGATAAGGTG TAAA TGCCTTATCCGGCCTGCAGGCAACG TTACTTTAAAACATA TERM 4126 3160681 - 3160730 + T 90 -16 -2.70704 | gap 2, overlap 3160680 ATTAATCCTTGCCCT GTT-TC-GCAGGCCGGATAAGGTG TAAA TGCCTTATCCGGCCTGCAGGCAAC GTTACTTTAAAACAT speC 3162867 - 3160732 - | ornithine decarboxylase, constitutive (ec 4.1.1.17) TERM 4127 3161772 - 3161759 - G 73 -5.2 -4.56597 | TTGTGCGGGCAAAAA CGCG CCTGGC CGCG AATATGGTTATCTTT TERM 4128 3162974 - 3163004 + H 73 -9.9 -3.41602 | opp_overlap 3162973 3162976 3162983 CCGACCGCCAGACAT CAGTAAAAACAGA CTGTT TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 4129 3162995 - 3162983 - H 71 -3.4 -4.79826 | opp_overlap 3162974, overlap 3162976 3162973 AGACATCAGTAAAAA CAGA CTGTT TCTG ATTTTACTGTTGTCC TERM 4130 3163489 - 3163504 + G 72 -2.4 -4.93877 | overlap 3163475 3163491 GGCGACGCTGGTCGG CGCGCT TATC GGCGAG TTTTGTTTGCTGGAA TERM 4131 3163755 - 3163769 + G 77 -11.4 -3.53563 | overlap 3163750 3163761 3163763 CCTGTTCGCTTGGCA TCGCCG TTT CGGCGA TTTGCGCGCCGATGT TERM 4132 3163972 - 3163987 + G 74 -2.4 -5.12617 | overlap 3163972 3163971 3163981 GGCGATGCCGATCTC CGCCGC ATGG GCGATG TTTTTTGCCTGATTC yqgA 3163292 - 3163999 + | hypothetical protein TERM 4133 3164147 - 3164131 - T 73 -10.9 -2.62616 | opp_overlap 3164130 3164129 3164126 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA SEN2960 3164773 - 3164339 - | hypothetical protein SEN2961 3166109 - 3164784 - | putative hydrolase SEN2962 3166661 - 3166134 - | hypothetical protein TERM 4134 3166598 - 3166568 - G 78 -6.8 -4.60487 | overlap 3166570 GACGATGTTCAAAAA CATCACCGGGATGA AAA TCCTCCCAGTAAAG ACCCGAAATTTCTCG TERM 4135 3166596 - 3166570 - G 71 -8 -3.91506 | overlap 3166568 CGATGTTCAAAAACA TCACCGGGATGA AAA TCCTCCCAGTAA AGACCCGAAATTTCT SEN2963 3167527 - 3166685 - | possible citrate lyase TERM 4136 3168180 - 3168191 + G 100 -4.4 -5.94597 | ATTGCACTCTCGATT CTCA AAGA TGAG TTTTTTTTACTCTTC SEN2964 3167619 - 3168497 + | putative LysR-family transcriptional regulator SEN2965 3170284 - 3168545 - | arylsulfatase TERM 4137 3169122 - 3169134 + g 70 -5.5 -4.46212 | overlap 3169123 GTATTAATTCCCCCC TGACC GCT GGTCG TTTTGTGATAGCGAC TERM 4138 3169261 - 3169251 - G 73 -5.4 -4.57341 | opp_overlap 3169251 AATTGCTTCCAAAAA TCTG GTT CAGA TTCATAGTGAAAGCC SEN2966 3171537 - 3170353 - | arylsulfatase regulator TERM 4139 3171290 - 3171279 - G 74 -7.2 -4.08216 | CGATTCCGGCTAAAA GCGG TTCA CCGC CTTGCCAGACAAAAT TERM 4140 3171630 - 3171654 + H 70 -5 -4.42386 | gap 1, opp_overlap 3171621 3171632, overlap 3171632 GCAGAATGCCGAGAG CAGGCTGTATC TATT GATAC-GCCGG TTTTCTGCATAGCGC TERM 4141 3171793 - 3171778 - H 76 -9 -3.68435 | overlap 3171776 CGTCTCAAAAGAATA TCGTCC TGAA GGACGA GAACTCACGGCATTT TERM 4142 3171849 - 3171861 + H 74 -3.5 -5.0538 | opp_overlap 3171849 AAAAAATTATATTAA TAATT TTA AATTA TTTTTTAGAATAACC TERM 4143 3172127 - 3172139 + G 84 -3.3 -5.36965 | GCGCAACTCATTCCT CTGTC GTC GGCGG TTTTTTATCGTGTTA SEN2967 3172049 - 3172732 + | LysR-family transcriptional regulator SEN2968 3173393 - 3172836 - | hypothetical protein SEN2969 3174870 - 3173371 - | possible amino acid transport protein SEN2970 3175453 - 3175079 - | hypothetical protein SEN2971 3176769 - 3175468 - | putative oxidoreductase TERM 4144 3176867 - 3176833 - H 70 -5.1 -4.386 | opp_overlap 3176833, overlap 3176851 TAACGTTTTACAAAA TATCGTCCGGAAGAA TGACG TTCTTTGGAACGATA TTCAGTTCCAGGCAA TERM 4145 3176942 - 3176965 + G 74 -2.4 -5.00616 | overlap 3176944 TCTGATGAGCGACGT GACATTACTT GCCG AAGTAACGAC TTTTTTACGCCAACG SEN2972 3176931 - 3178415 + | possible aldehyde dehydrogenase SEN2973 3178931 - 3178551 - | hypothetical protein SEN2974 3179416 - 3178931 - | hypothetical protein TERM 4146 3179968 - 3179957 - R 82 -3 -5.46698 | GTGAAAACTAAAAAA TGAT TTAA ATCA AAAAACAAACTATTC SEN2975 3181065 - 3180142 - | hypothetical protein SEN2976 3181982 - 3181104 - | possible hydrolase TERM 4147 3181545 - 3181564 + g 73 -6.4 -4.43189 | opp_overlap 3181545 ACCCACCTTTGCAAA TGGCAGTT GAAA AACAGCCA TTTTATCGCCTTCCT TERM 4148 3182237 - 3182215 - R 74 -10.8 -3.27653 | overlap 3182213 ACCCTTACCACAATA TTATTTTCAG CAT CTGAAAATAA TCAGGCAAACTAAAT TERM 4149 3182256 - 3182282 + r 78 -6.5 -4.59773 | opp_overlap 3182258, overlap 3182258 GGCAAACTAAATGAT AACGCGCTGGT ATAAA ACCAACGCGTA TTTTTACCGATAAGG TERM 4150 3182258 - 3182280 + r 77 -9.1 -3.91506 | opp_overlap 3182258, overlap 3182256 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4151 3182280 - 3182258 - R 86 -11.3 -3.66643 | opp_overlap 3182258 3182256 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4152 3182329 - 3182306 - R 85 -12.4 -3.38326 | overlap 3182308 GATAAGGGTAATGAA GACGGCCACC CGAA GGTGGCCGTT AGAACCCGGTAGCGC TERM 4153 3182327 - 3182308 - R 100 -15 -3.25539 | overlap 3182306 TAAGGGTAATGAAGA CGGCCACC CGAA GGTGGCCG TTAGAACCCGGTAGC SEN2977 3183682 - 3182378 - | hexuronate transporter TERM 4154 3183765 - 3183754 - H 76 -4.4 -5.04325 | opp_overlap 3183758 CTGAAATCACAAAAA TTGG TTGA CCAA TCAATATTTTCTCAT SEN2978 3184087 - 3185271 + | D-mannonate hydrolase TERM 4155 3185279 - 3185303 + F 100 -16.5 -3.62275 | GCAAATAACCTTCTT TCGCATGGCGC GAC GCGTCATGCGA TTTCCCCTACTCAAT TERM 4156 3185820 - 3185775 - g 87 -8.3 -4.66163 | gap 1, opp_overlap 3185789 3185790 ACCGTGACCGAAAAA GGCTACTG-CACCGACCCCGCC AGC GGCGAGCTTGATGTCAATAACC CGCTGATCCAAAACG SEN2979 3185382 - 3186854 + | D-mannonate oxidoreductase TERM 4157 3187810 - 3187822 + G 76 -10.5 -3.68619 | GTTCCGCCTGCTGGG GCCGG ATA CCGGC TTTGACTCCATTGGC SEN2980 3186866 - 3188278 + | uronate isomerase (glucuronate isomerase) TERM 4158 3188460 - 3188403 - T 76 -8.8 -3.7798 | gap 2, opp_overlap 3188426, overlap 3188416 GATAAAAAGCAAAGA TGTCGCTGATTAATCCCGAATCACTTAC TAAG GTAAGTGATTCGGG-TGAACAAAC-ACA GCCATCTTCTGCGTC TERM 4159 3188449 - 3188416 - T 100 -16.9 -3.14344 | opp_overlap 3188426, overlap 3188403 GATGTCGCTGATTAA TCCCGAATCACTTAC TAAG GTAAGTGATTCGGGT GAACAAACACAGCCA SEN2981 3189633 - 3188578 - | hypothetical protein TERM 4160 3190290 - 3190254 - R 100 -13.8 -3.81488 | gap 1, overlap 3190256 CGCTGGTAAACACAA CAGGCGGGATATCGGCA CCCA CGCCGATATCCCGAC-G AGAATGACCCCGTTA TERM 4161 3190289 - 3190256 - R 100 -17.5 -3.49232 | overlap 3190254 CTGGTAAACACAACA GGCGGGATATCGGCA CCCA CGCCGATATCCCGAC GAGAATGACCCCGTT gsp 3192159 - 3190303 - | glutathionylspermidine synthetase/amidase TERM 4162 3191444 - 3191457 + g 77 -4.5 -4.83615 | ATAACGTGTCCGTTC GCCTG TACA TAGGC TTTTTGTAACGGATC TERM 4163 3191833 - 3191815 - G 74 -11.6 -3.24747 | TTGCCAGATGAGCAA CGCCCCGG CCT CCGGCGCG CGCGGCGAACCGTTC yghU 3192386 - 3193252 + | possible transferase SEN2984 3194030 - 3193320 - | hypothetical protein TERM 4164 3193875 - 3193825 - G 88 -11.2 -4.07568 | gap 3, overlap 3193810 CGGTTCGTCGTAAAA GGCGCGACCCGCA-GCGCCCGCCCG CTTT CCAGCA-GCGCCTGCGGAT-GCGCC AGGTTCGCCGAAGCA SEN2985 3195082 - 3194030 - | possible ABC-transport protein, periplasmic-binding component TERM 4165 3194756 - 3194776 + g 78 -6.7 -4.59773 | opp_overlap 3194753 3194755 CGTGACAAACACCAC CTGCGGGCG CAG CGCCACCAG TTTTTCAGGATCAAC TERM 4166 3195067 - 3195047 - G 80 -9.7 -3.96447 | CCAGCAAAAAAGCAA CGCCAGC AGAGAGA GCTGGCG CAAAAATTTATTCAT hybG 3195406 - 3195158 - | hydrogenase-2 component protein hybF 3195775 - 3195434 - | hydrogenase-2 component protein hybE 3196256 - 3195768 - | hydrogenase-2 component protein hybD 3196743 - 3196249 - | hydrogenase-2 component protein TERM 4167 3196329 - 3196308 - G 71 -10.2 -3.16564 | opp_overlap 3196311, overlap 3196311 CTCGCAGCGCAGCAA GAACCTGC TCAAGC GCAGGTTC AATCATCGCCTCGAC hybC 3198446 - 3196743 - | hydrogenase-2 large subunit TERM 4168 3197417 - 3197429 + g 74 -10.5 -3.50335 | TAGTGCCTTCCCACG GCGCC TGC GGCGC TTCATCTTTGTACCA TERM 4169 3197972 - 3197988 + g 70 -9.5 -3.40382 | opp_overlap 3197975, overlap 3197975 GCTGACCGCTGGCGA CAAGATC CTT GATCTTG TTCTGAACTTTCGTG TERM 4170 3198465 - 3198476 + r 76 -4.4 -5.07652 | overlap 3198454 3198459 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3199621 - 3198443 - | probable hydrogenase-2 cytochrome b subunit TERM 4171 3198589 - 3198569 - G 74 -8.3 -3.95911 | AATAGAAATCAACAA TTCTTCCCA AGT TGGGAAGTA GTGGTAGCCGCCACC TERM 4172 3199593 - 3199603 + g 77 -8.2 -4.21462 | TTACTGATGATTTTT CCGC CCA GCGG TTTTGGATCATGACT hybA 3200597 - 3199611 - | hydrogenase-2 small subunit TERM 4173 3200187 - 3200204 + g 76 -2.7 -5.00616 | gap 1, overlap 3200191 TTTGTCATAGTGGAC GATGCCGG TTT TCGG-ATC TTTTTTCAGCGCCGA TERM 4174 3200254 - 3200267 + g 74 -6.7 -4.29106 | opp_overlap 3200253 CAGTTAGGATCAACG CAGTG CATA CACTG TTTCTTGATGTAGGC hypO 3201718 - 3200600 - | hydrogenase-2 small chain protein yghW 3202195 - 3201908 - | hypothetical protein TERM 4175 3202205 - 3202238 + r 88 -14.9 -3.05384 | ATTCATCTGACCTCC TTAGTCGCTATATAA TAAA TTATATAGCGACTGA TTAAATGAAGGCCAG TERM 4176 3202253 - 3202265 + r 89 -6.2 -5.27477 | ATTAAATGAAGGCCA GCGC ATTAC GCGC TTTTTTGCTTCACAT SEN2995 3203923 - 3202280 - | methyl-accepting chemotaxis protein TERM 4177 3202436 - 3202387 - G 76 -10.7 -3.62096 | gap 1, opp_overlap 3202366 GCTCACTAGCGGAAA GCCGGAACTGCTGTACGGAGCGTT GCA AATCCTCCGT-CTGCCGTTCCAGC GCCGCCGCCGCCGCG TERM 4178 3203993 - 3204017 + r 79 -2.1 -5.48303 | overlap 3203994 GTTATCGGCAAGGCG CGGAGAATATA TAA TGCATTCTCCA TTTTTTTACAGTTAT yqhA 3204724 - 3204230 - | hypothetical protein TERM 4179 3204605 - 3204592 - G 78 -6.7 -4.62069 | CCGCCAGGGCAAAAA CGTTC GGCA GAACG TGTAGAATTTCCTGG TERM 4180 3204654 - 3204626 - G 71 -4.6 -4.57341 | overlap 3204627 AATTTCCTGGAAAAA TTTTAGCGCTAA AGCGA TCAGCGCCAAAG AGAGGCCAAAATACA SEN2997 3205519 - 3205004 - | exported protein TERM 4181 3205702 - 3205688 - g 76 -2.8 -4.99972 | AGAAAACAGTAAAAA TTTGCC TCA GGGAAA GACAAAACTCAGCGA SEN2998 3205611 - 3206021 + | hypothetical protein SEN2999 3206008 - 3206412 + | hypothetical protein TERM 4182 3206424 - 3206410 - f 70 -2.1 -5.08601 | GCACGGCAAGAAAAA TAACC TTCAT GGCTA GTTAACTCTGTTGTG TERM 4183 3206611 - 3206596 - g 85 -6.8 -4.87291 | gap 1, overlap 3206598 TATCCTAAGCAAAAA CAGCCGG CGC CCGGC-G TCCAGGCGAAAATGA TERM 4184 3206610 - 3206598 - g 83 -10.5 -4.05402 | overlap 3206596 TCCTAAGCAAAAACA GCCGG CGC CCGGC GTCCAGGCGAAAATG yghA 3206536 - 3207420 + | possible oxidoreductase TERM 4185 3207512 - 3207485 - T 100 -9.9 -5.4833 | gap 2 TTAGGCAATAAAAAA GCCGGGT--GGCG ACTT CGCCTTACCCGGC CTACAGCGTCAGCAG exbD 3207958 - 3207533 - | biopolymer transport ExbD protein exbB 3208699 - 3207965 - | biopolymer transport ExbB protein SEN3003 3208841 - 3208692 - | hypothetical protein TERM 4186 3209785 - 3209768 - g 74 -7.7 -4.13304 | gap 1 AAAGCAGCCTCAAAA TCGCC-GC ATG GCTGGCGA ACCATCCTCAGGTCG metC 3208951 - 3210138 + | beta-cystathionase yghB 3210278 - 3210937 + | DedA-family integral membrane protein yqhC 3211918 - 3211001 - | probable AraC-family trancriptional regulatory protein yqhD 3212093 - 3213256 + | probable alcohol dehydrogenase yqhE 3213362 - 3214189 + | 2,5-diketo-D-gluconic acid reductase A TERM 4187 3214211 - 3214230 + F 100 -15 -5.15969 | TTTATCGCACGCCAT GCCCGACG ATGT CGTCGGGC TTTTTTGCATTCCGA SEN3009 3214539 - 3215840 + | possible membrane transport protein TERM 4188 3216324 - 3216305 - g 100 -15 -4.77036 | opp_overlap 3216303 GCTGATGATGAAAAA CTGGCCGC GCTG GCGGCCAG AATTCGTGAGGCATA SEN3010 3215885 - 3216340 + | hypothetical protein ygiR 3219066 - 3216895 - | hypothetical protein TERM 4189 3217918 - 3217895 - G 74 -8 -3.97947 | overlap 3217897 GTGATCGAGCAGAAA GAGCAGCCGC CAAA GCAGCCGCGC ATGATATTGATCGAA TERM 4190 3219991 - 3220005 + G 78 -7 -4.63527 | overlap 3219993 CTTAACCTGGTACGA CGGCGG CGC CCGCAG TTTTTACGCTGGTAA TERM 4191 3220128 - 3220100 - g 71 -10.1 -3.57263 | overlap 3220074 ATCGCGATGGTGAAA GCGCTCGGCGGCG TGC CGACGCCGATGGC GCAAGGCGAACTCTA SEN3012 3219554 - 3220537 + | putative membrane transport protein (periplasmic component) TERM 4192 3220545 - 3220563 + F 88 -12.4 -3.56821 | opp_overlap 3220540 3220539, overlap 3220539 3220556 ATATGTAAATCTGCC GGGCAGGG TTC TCCTGCCC TTTACAGGATGTAAT SEN3013 3220579 - 3221061 + | possible membrane transport protein TERM 4193 3221247 - 3221235 - g 76 -3.3 -5.02074 | opp_overlap 3221237 3221238, overlap 3221236 3221238 TTATTTCGCAAAAAA TGACC GTC GGTCT CGATGGCTTTACGCT TERM 4194 3221492 - 3221480 - g 70 -3.3 -4.82667 | CCATTACAGGAAAAA GAGGG CTA CTCTC CGGCGTTCTCTACGG TERM 4195 3221581 - 3221608 + G 71 -4.9 -4.57569 | overlap 3221581 3221582 TGTCTATTCGCTGGC TAGCGGCGGC-AC CTCT GTCGCCGCC-CTG TTTTTGGCGGGCTAC ygiK 3221072 - 3222379 + | decarboxylate transporter sufI 3223836 - 3222424 - | SufI protein plsC 3224647 - 3223910 - | 1-acyl-glycerol-3-phosphate acyltransferase TERM 4196 3224849 - 3224806 - R 90 -13.3 -3.61103 | opp_overlap 3224823 3224832, overlap 3224823 TAATCCGATCTGAAA CCGTAGGCCGGATAA-GACGC TACT GCGTCGTCATCCGGCA-ACGG CAGAGCGCCGGATGG TERM 4197 3224832 - 3224868 + r 75 -10.9 -3.10905 | opp_overlap 3224806 3224823, overlap 3224823 ATAAGACGCTACTGC GTCGTCATCCGGC AACGGCAGAGC GCCGGATGGCGGC TTAGATGCCTTGTCC parC 3227162 - 3224904 - | topoisomerase IV subunit A TERM 4198 3227263 - 3227222 - R 75 -9.6 -3.48593 | gap 1, overlap 3227224 3227225 3227250 TATTGCCGCAGATAA TACCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAG-GTG GCGAGGAAGTTAACG TERM 4199 3227262 - 3227224 - R 93 -14.7 -3.31726 | overlap 3227222 3227225 3227250 TTGCCGCAGATAATA CCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGGT GGCGAGGAAGTTAAC TERM 4200 3227261 - 3227225 - R 100 -18.2 -2.58822 | overlap 3227224 3227222 3227250 TGCCGCAGATAATAC CCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGG TGGCGAGGAAGTTAA SEN3018 3228139 - 3227273 - | possible AraC-family transcriptional regulator ygiW 3228603 - 3228211 - | possible exported protein ygiX 3228755 - 3229414 + | probable two-component system response regulator TERM 4201 3229436 - 3229456 + G 71 -6.1 -4.37527 | opp_overlap 3229426, overlap 3229439 CGCAACGTCTCAGCC TGCGCGTCA GGC TGACGCTTA TTTTCCTGATTCTGG TERM 4202 3229439 - 3229453 + G 86 -10 -4.29049 | opp_overlap 3229426, overlap 3229436 AACGTCTCAGCCTGC GCGTCA GGC TGACGC TTATTTTCCTGATTC TERM 4203 3229788 - 3229799 + G 81 -2.2 -5.37345 | gap 1, opp_overlap 3229788 TCTGAAGGATGACAA CGACC TCT GG-CG TTTTTTGTGGTTGAA ygiY 3229411 - 3230760 + | probable two-component system sensor histidine kinase mdaB 3230867 - 3231448 + | putative oxidoreductase ygiN 3231480 - 3231794 + | hypothetical protein parE 3233811 - 3231919 - | topoisomerase IV subunit B yqiA 3234420 - 3233839 - | hypothetical protein TERM 4204 3234303 - 3234274 - G 71 -10.8 -3.18239 | gap 1, opp_overlap 3234276 GAGAGATTCCAGCAA CT-CCGCCGCATC GGCAG GATACGGCGGTAG TTGAGGGACGATCAT icc 3235247 - 3234420 - | hypothetical protein yqiB 3235694 - 3235272 - | hypothetical protein TERM 4205 3235361 - 3235371 + g 95 -5.4 -5.30616 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTTGGATAA yqiE 3236323 - 3235691 - | hypothetical protein TERM 4206 3235718 - 3235770 + g 74 -7.7 -4.20712 | opp_overlap 3235735, overlap 3235726 CTCGTTTTTTAACTC TTGATGATGCAACTGAAGCCATTGC AAA GCGATGACTGCGGCTGCGTTGTCGA TTTTCCCCTCTTCTA TERM 4207 3236257 - 3236244 - G 100 -3.7 -5.95166 | opp_overlap 3236245 3236250, overlap 3236245 TCCAATGAAAAAAAA CCGCG ATAG CGCGT TTCCCGTGCAATAAT TERM 4208 3236256 - 3236245 - G 74 -7.2 -4.15473 | opp_overlap 3236245 3236250, overlap 3236244 CCAATGAAAAAAAAC CGCG ATAG CGCG TTTCCCGTGCAATAA TERM 4209 3236452 - 3236476 + H 72 -5.7 -4.42235 | opp_overlap 3236436, overlap 3236454 GCCAACTTTTTGCAG TGGCGGATTCT GCT AGAATCAGCAA TTATTTTTACAAATT tolC 3236524 - 3237999 + | outer membrane protein TolC precursor TERM 4210 3238010 - 3238067 + F 100 -22.9 -2.78384 | overlap 3238009 ATTGATAAGTTATTC GCTGGCGCTGCGCTTATCAGACCTGTG CCCT TGTAGGTCTGGTAAGCGCGGCGCTACC TGTCATAAAGCCGCG TERM 4211 3238347 - 3238330 - g 80 -4.9 -5.00616 | gap 1, opp_overlap 3238330, overlap 3238332 CTGGCTGTGAAAAAA GCGATGAC ACC GT-ATCGC TGTATCAAAACGCTG TERM 4212 3238376 - 3238358 - g 71 -6 -4.25283 | ATCGCTGTATCAAAA CGCTGA TGACTGT TCAGCG GCGAATCCGGGCAAA TERM 4213 3238738 - 3238712 - g 71 -4.2 -4.65895 | overlap 3238713 3238715 TGCGGCAGGTAAAAA CTACGGCGCGGC GCA ACCGGGCCGGAC AATGACCGTACCGAA TERM 4214 3238735 - 3238715 - g 71 -10.3 -3.26405 | overlap 3238713 3238712 GGCAGGTAAAAACTA CGGCGCGGC GCA ACCGGGCCG GACAATGACCGTACC TERM 4215 3238858 - 3238831 - g 71 -10.6 -3.24232 | gap 1, opp_overlap 3238835, overlap 3238829 3238827 CCGTCGCCAAACAGA GCACCATGCAGCG TAG CGCTGC-CGGTAC TTCAACACGTTCGAT ygiB 3238212 - 3238883 + | possible lipoprotein TERM 4216 3239256 - 3239272 + G 77 -3.6 -5.10497 | overlap 3239255 CCGACACGCCAACAT CGCTGT ATGAA GCGGCG TTTTTTCAGTGGATT ygiC 3238889 - 3240052 + | hypothetical protein ygiD 3240944 - 3240114 - | hypothetical protein ygiE 3241043 - 3241816 + | hypothetical protein TERM 4217 3242813 - 3242803 - g 80 -4.6 -5.11389 | overlap 3242810 AGAATATAAAGAAAA CGGC AAA GCCA TGAAGGATGACTATG SEN3034 3242459 - 3244255 + | probable arylsulfate sulfotransferase TERM 4218 3244651 - 3244641 - g 91 -6.8 -5.1925 | opp_overlap 3244640 TCACAATTCAAAAAA GCGA AGT TCGC CTGGTATGCGGCTTA SEN3035 3244275 - 3244946 + | disulfide isomerase SEN3036 3244961 - 3245638 + | disulfide isomerase TERM 4219 3245688 - 3245653 - T 83 -9 -4.21142 | opp_overlap 3245658, overlap 3245658 ACCTGAATAGATAAA CCAAAGCAGAGGTCTG CATT CAGGCCTCTGCTTTTC TCACAATAATTTTAC TERM 4220 3245658 - 3245683 + T 100 -15.5 -4.3898 | opp_overlap 3245653 3245658 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4221 3245683 - 3245658 - T 95 -13.3 -4.20552 | opp_overlap 3245658, overlap 3245653 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4222 3245765 - 3245784 + T 100 -12.2 -5.02074 | opp_overlap 3245765 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGA TERM 4223 3245784 - 3245765 - T 100 -12.2 -5.50925 | opp_overlap 3245765 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGA ribB 3246462 - 3245809 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4224 3246177 - 3246205 + g 77 -8.1 -4.10429 | opp_overlap 3246182, overlap 3246180 3246182 3246198 CTTCAATGGTCACGG TAAAACCGGTGCC GTA GGCGCTGGTGTTG TTTTCCACCATCATT TERM 4225 3246180 - 3246202 + g 74 -7.6 -4.17762 | opp_overlap 3246182, overlap 3246177 3246182 3246198 CAATGGTCACGGTAA AACCGGTGCC GTA GGCGCTGGTG TTGTTTTCCACCATC TERM 4226 3246182 - 3246200 + g 76 -10.2 -3.68435 | opp_overlap 3246182, overlap 3246180 3246177 3246198 ATGGTCACGGTAAAA CCGGTGCC GTA GGCGCTGG TGTTGTTTTCCACCA TERM 4227 3247117 - 3247094 - g 71 -4.4 -4.58395 | overlap 3247095 3247096 CGCACCCGGGAAAAA CTGGCGCTGC TGGA GCAACGCCTC AGCGAACTGGAAGCT yqiC 3246899 - 3247195 + | hypothetical protein TERM 4228 3247226 - 3247199 - T 100 -9.8 -4.90906 | opp_overlap 3247204, overlap 3247200 3247201 CCACAAGAGTAAAAA CGTGAACGGGCC TGAC GGCCCGCTCATA TAAGATCTGAATAAT TERM 4229 3247225 - 3247200 - T 82 -11.1 -3.53459 | opp_overlap 3247204, overlap 3247199 3247201 CACAAGAGTAAAAAC GTGAACGGGCC TGAC GGCCCGCTCAT ATAAGATCTGAATAA TERM 4230 3247224 - 3247201 - T 86 -14.6 -2.70991 | opp_overlap 3247204, overlap 3247200 3247199 ACAAGAGTAAAAACG TGAACGGGCC TGAC GGCCCGCTCA TATAAGATCTGAATA glgS 3247473 - 3247270 - | glycogen synthesis protein GlgS TERM 4231 3248191 - 3248155 - g 75 -13 -2.60512 | gap 1, overlap 3248152 GGGAAGAGGAATTTA TCGGCGGCATGGC-GAT TATT ACCGGCCACGCCGCCGT CGCCGGTACACCTTG SEN3040 3247737 - 3248357 + | hypothetical protein yqiK 3248376 - 3250055 + | hypothetical protein TERM 4232 3250075 - 3250096 + T 100 -13.7 -5.9667 | CCGCTATATCTCCTG TCCCTGGCC ATAA GGCCGGGGA TTTTTTTATCTTTTT TERM 4233 3250276 - 3250257 - T 86 -11.4 -3.71649 | opp_overlap 3250257, overlap 3250240 3250250 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC TGTAATAAGGAAAGG TERM 4234 3250368 - 3250390 + T 77 -9.1 -3.94051 | opp_overlap 3250367 3250365 3250362 AACAGCCAATCAGAG GGGGGAGAG ATCCC CTCTCACCC TTATTCCTTTACTTT TERM 4235 3250433 - 3250420 - T 83 -2.3 -5.76949 | TAGGTCGAAAAAAAA GCAGC GTCA ACCGC GAGATACGCGTCGAA rfaE 3251947 - 3250514 - | ADP-heptose synthase TERM 4236 3251748 - 3251727 - G 72 -11.5 -3.13403 | opp_overlap 3251725, overlap 3251725 3251745 GCGGCGTCATCAATA CCCGTCAGG CCGA CCAGACGGG CGTTCGCTCCCAGAG glnE 3254838 - 3251995 - | adenyl-transferase TERM 4237 3254422 - 3254374 - G 70 -9.4 -3.67622 | overlap 3254370 3254376 CATGCCTAAAATCAA CAGCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGCGG CAACAGGCGGCATAC TERM 4238 3254420 - 3254376 - G 73 -10.6 -3.41359 | overlap 3254370 3254374 TGCCTAAAATCAACA GCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGC GGCAACAGGCGGCAT ygiF 3256257 - 3254956 - | hypothetical protein ygiM 3256499 - 3257113 + | hypothetical protein TERM 4239 3257584 - 3257594 + G 77 -8.2 -4.08692 | overlap 3257583 3257585 CCCTTGCGCGTATTG CGCG TGG CGCG TTTTGCCGCCCGTTA TERM 4240 3258003 - 3257970 - g 73 -5.1 -4.62471 | gap 1, overlap 3257971 3257972 CTTAACGCCGAAAAA CCTCTGGCCGC-GCCA TCA TGGCCACGGCCCGGCG GGCGTGAAACTGGTC cca 3257176 - 3258417 + | tRNA nucleotidyltransferase TERM 4241 3258503 - 3258490 - T 73 -9.5 -3.30243 | AGTTAGGCCGGACAA GGCGG TACG CCGCC ATCCGGCAGGTCAAT bacA 3259345 - 3258521 - | bacitracin resistance protein (putative undecaprenol kinase) folB 3259802 - 3259440 - | dihydroneopterin aldolase ygiH 3259906 - 3260517 + | hypothetical protein TERM 4242 3260733 - 3260755 + T 87 -11.2 -3.97406 | overlap 3260734 TTGCTGTAAACCCGT TGGGGCGGCA TGA TGTCGCCCCC TTTCTCCGCTTTTAC TERM 4243 3260734 - 3260754 + T 88 -14.7 -2.97721 | overlap 3260733 TGCTGTAAACCCGTT GGGGCGGCA TGA TGTCGCCCC CTTTCTCCGCTTTTA gcp 3261780 - 3260767 - | possible glycoprotease TERM 4244 3261975 - 3261958 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3262008 - 3262223 + | 30S ribosomal subunit protein S21 TERM 4245 3262270 - 3262302 + F 80 -7 -4.62475 | gap 1, overlap 3262273 TCGAGTTGTAGTTGT AAGGCCGTGC-TTCC GAAA GGAATGCGCGGCTTG TTTTCGTTTATGCAT TERM 4246 3262273 - 3262299 + F 95 -10.9 -4.40882 | gap 1, overlap 3262270 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTGTTTTCGTTTATG TERM 4247 3262600 - 3262628 + G 70 -5.4 -4.45517 | gap 1, opp_overlap 3262599 3262598 3262616 3262626, overlap 3262616 3262618 ATAATGAGAAAACCC CT-TCTTTCACCG TAAA CGGTGAAAAACAG TTTTATCACTGCTTT TERM 4248 3262904 - 3262921 + G 71 -9.9 -3.61536 | opp_overlap 3262892 AAAGCGCGGTCTGAG CGCTGAA ATTA TTCAGCG TTTCGCCATTGGCTT TERM 4249 3263783 - 3263757 - g 86 -10.8 -4.11216 | CGTTTAGTGCCAAAA CAGGCGGAAAGC GGC GTTTCCCGCCCG GCTCCGCAGCTAAAA dnaG 3262458 - 3264203 + | DNA primase TERM 4250 3264320 - 3264298 - f 79 -10.6 -3.53012 | TGCCCTCGCTTTAAA TGTCGACAGC TAT ACCGTCGACA CCAATCAAACGAATA TERM 4251 3264976 - 3264956 - g 80 -10.3 -3.83155 | overlap 3264958 GACGAAGATGAAGAA GACGGCGAC GAT GACGCCGCC GATGACGACAACAGC TERM 4252 3264977 - 3264958 - g 85 -12.8 -3.49169 | overlap 3264956 CGAAGATGAAGAAGA CGGCGACG ATGA CGCCGCCG ATGACGACAACAGCA rpoD 3264353 - 3266200 + | RNA polymerase sigma-70 factor TERM 4253 3266220 - 3266237 + T 100 -14.1 -5.60993 | opp_overlap 3266220 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAGGCC TERM 4254 3266237 - 3266220 - T 100 -14.1 -3.95073 | opp_overlap 3266220 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAGGCC TERM 4255 3266308 - 3266293 - T 72 -10.4 -2.90219 | opp_overlap 3266291 CAGAATTTCTACACA GCGCGA GTAT TCGCGC CCTCATTCCCCATTG mug 3266830 - 3266324 - | G/U mismatch-specific DNA glycosylase TERM 4256 3267077 - 3267060 - R 82 -11.3 -3.5275 | opp_overlap 3267060, overlap 3267056 AAATCATATAATTAA GCCACTC TAAA GAGTGGC TTTTTTGTTTCTGAC TERM 4257 3267060 - 3267077 + r 100 -11.3 -5.72622 | opp_overlap 3267060 3267056 AAATCATATAATTAA GCCACTC TAAA GAGTGGC TTTTTTGTTTCTGAC yqjH 3267878 - 3267111 - | hypothetical protein TERM 4258 3268521 - 3268507 - g 100 -7.8 -5.40072 | GCGGGCGGAAAAAAA TCGCGA TTA CCGCGA ACGGCGCGCAATGGC TERM 4259 3268668 - 3268616 - g 71 -4.9 -4.67353 | GGAGTTACGTAAAAA TCCGCAGATGAAGC-GGGCGCTGGA TAACT TCAAG-GCCGTGCTGGATCTGCGGA TAAACCACAGCGATA yqjI 3268110 - 3268757 + | hypothetical protein SEN3058 3270322 - 3268754 - | methyl-accepting chemotaxis protein II TERM 4260 3270683 - 3270643 - R 79 -12.7 -2.78384 | gap 2, opp_overlap 3270639 3270646 3270648 CCGCCTTCTATCAGA GCGCATCCGCCCGGTAAGC TTATT GCT-ACCGGGCGGATGT-C ATTACCGTTGCTACC TERM 4261 3270646 - 3270681 + r 100 -19.9 -2.75957 | gap 1, opp_overlap 3270643, overlap 3270639 3270648 CCTTCTATCAGAGCG CATCCGCCCGGTAAGC TTATT GCT-ACCGGGCGGATG TCATTACCGTTGCTA TERM 4262 3270648 - 3270679 + r 100 -16.7 -2.92246 | gap 1, opp_overlap 3270643, overlap 3270646 3270639 TTCTATCAGAGCGCA TCCGCCCGGTAAGC TTATT GCT-ACCGGGCGGA TGTCATTACCGTTGC aer 3272230 - 3270710 - | aerotaxis receptor protein TERM 4263 3273501 - 3273483 - g 70 -6.6 -4.08144 | TGGATGAAGTACAAA CCGGCATG GGG CGTACCGG CAAGATGTTTGCCTG TERM 4264 3273756 - 3273746 - g 74 -2.4 -5.07486 | CAGGCGGAACAAAAA GGCG ATA CGCT CCTGGATGGTTTTCG oat 3272750 - 3274039 + | probable aminotransferase TERM 4265 3275360 - 3275334 - g 70 -2.9 -4.70659 | gap 1, opp_overlap 3275318 3275353 3275357, overlap 3275337 3275338 GGCCATACGCAAAAA GAATCTG-GCCG TTGT CGGCGCAGGCCC GGCGGGGCTGGCTTT fadH 3274210 - 3276228 + | 2,4-dienoyl-CoA reductase [NADPH] (ec 1.3.1.34) (2,4-dienoyl coenzyme A reductase) TERM 4266 3276258 - 3276307 + T 83 -13.7 -2.58249 | gap 1, overlap 3276258 GGCGCTGCGCTTATC GGGCTTACGCCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGC CTTATCGACGGTGTC TERM 4267 3276258 - 3276308 + T 86 -13.5 -3.30771 | overlap 3276258 GGCGCTGCGCTTATC GG-GCTTACGCCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGCC TTATCGACGGTGTCC ygjO 3277445 - 3276309 - | hypothetical protein ygjP 3277531 - 3278028 + | hypothetical protein TERM 4268 3278530 - 3278546 + G 90 -4.4 -5.39755 | gap 1, overlap 3278533 GCTGATAGCGAAAGG TGTGCCG GAAG CGGC-CA TTTTTTGTGATTATG ygjQ 3278180 - 3278872 + | hypothetical protein TERM 4269 3278902 - 3278875 - f 74 -6.9 -4.25104 | TTCTCGCCAGTAAAA TGCCAGAGTGC GTCGCA GCGCACTGGCA AGGGCGGAAAGGCGT ygjR 3278961 - 3279959 + | possible oxidoreductase TERM 4270 3280101 - 3280128 + F 93 -12.2 -3.8211 | opp_overlap 3280105, overlap 3280105 GTCACCGGGCAGCCA TAAAGGAATGCG TCAG CGTATTCCTTTA TTGTTGTAAGTGAGA TERM 4271 3280105 - 3280124 + F 81 -8.6 -4.52415 | opp_overlap 3280105, overlap 3280101 CCGGGCAGCCATAAA GGAATGCG TCAG CGTATTCC TTTATTGTTGTAAGT TERM 4272 3280163 - 3280142 - f 86 -14.5 -2.52676 | opp_overlap 3280144 TATTGTTGTAAGTGA GACCTTGCC GAAT GGCAAGGTC TATGCATAAAAGCAA TERM 4273 3280144 - 3280161 + F 74 -11.3 -2.91264 | opp_overlap 3280142 TTGTTGTAAGTGAGA CCTTGCC GAAT GGCAAGG TCTATGCATAAAAGC TERM 4274 3280208 - 3280175 - f 81 -8.1 -4.42386 | opp_overlap 3280179, overlap 3280179 GGTCTATGCATAAAA GCAACGGCTAATGCC ATTC GGCGTTAGCCGTTTT TTTTTTGCATAGGGA TERM 4275 3280179 - 3280204 + F 100 -15.5 -6.38039 | opp_overlap 3280179 3280175 TATGCATAAAAGCAA CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTTTGCATA TERM 4276 3280204 - 3280179 - f 95 -13.3 -3.76186 | opp_overlap 3280179, overlap 3280175 TATGCATAAAAGCAA CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTTTGCATA ygjT 3280230 - 3281198 + | possible drug efflux protein TERM 4277 3281258 - 3281232 - f 100 -16.6 -4.72272 | opp_overlap 3281232 CTGCCCCATCAAAAA CGCCCGGCAG CGCACAC CTGCCGGGCG TTTTTGTTTAACATG TERM 4278 3281232 - 3281258 + F 100 -16.6 -5.28942 | opp_overlap 3281232 CTGCCCCATCAAAAA CGCCCGGCAG CGCACAC CTGCCGGGCG TTTTTGTTTAACATG ygjU 3281453 - 3282697 + | probable membrane transport protein TERM 4279 3283268 - 3283284 + G 73 -5 -4.65895 | TGTTTCTGGAAAATG GGCTGC TCCCT GCCGCC TTTTTGCCTGGCGAC TERM 4280 3283509 - 3283535 + G 85 -8.7 -4.45577 | opp_overlap 3283507 3283509 CCTTTTCCATAAACA CGGCCTGTCGG CATTA TTGATAGGCCG TTTTATCGCGTTTGT yqjA 3283147 - 3283809 + | hypothetical protein TERM 4281 3284165 - 3284147 - g 76 -8.8 -4.0251 | ACGATGACAACGAAA CGGTACAG TGG CTGTCCCG CTTACGGGAAAGCTC yqjB 3283813 - 3284196 + | hypothetical protein TERM 4282 3284282 - 3284264 - f 76 -7.4 -4.27441 | opp_overlap 3284264 3284263 3284260 ACTATGATTAATAAA GCGGTG TTTAACC CACCGC GTTATTATCGGGATC yqjC 3284341 - 3284709 + | hypothetical protein yqjE 3285059 - 3285457 + | hypothetical protein TERM 4283 3285543 - 3285487 - g 71 -7.2 -3.99805 | opp_overlap 3285506, overlap 3285482 3285517 CGCGAAAAACGTAAA GCG-CTGCTTCTCAGTCAGATCCAGCAG CAA CGGCTGGATCTGTCCGCC-AGCCGTCGC GACTGGCTGGAGACC yqjK 3285454 - 3285753 + | hypothetical protein TERM 4284 3285770 - 3285817 + F 100 -13.7 -4.45485 | gap 2, opp_overlap 3285773, overlap 3285773 ATCTTTTCTTTTATA GCATCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGATAC TTTTATGCATATAGT TERM 4285 3285773 - 3285814 + F 86 -14 -3.1919 | gap 2, opp_overlap 3285773, overlap 3285770 TTTTCTTTTATAGCA TCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGA TACTTTTATGCATAT TERM 4286 3285814 - 3285773 - f 76 -11.8 -2.62184 | gap 2, opp_overlap 3285773 3285770 TTTTCTTTTATAGCA TCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGA TACTTTTATGCATAT TERM 4287 3285953 - 3285928 - g 88 -13.4 -3.35679 | opp_overlap 3285931, overlap 3285931 TCTCTCCAGCGATAA CAATGACGCG CCAAAC CGCGTCATTG CTCATGAAAATAGCA TERM 4288 3285950 - 3285931 - g 73 -9.3 -3.8211 | opp_overlap 3285931, overlap 3285928 CTCCAGCGATAACAA TGACGCG CCAAAC CGCGTCA TTGCTCATGAAAATA yqjF 3285908 - 3286393 + | hypothetical protein TERM 4289 3286436 - 3286417 - f 89 -6.4 -5.28481 | opp_overlap 3286412 3286417, overlap 3286426 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTCATCTGAAG TERM 4290 3286417 - 3286436 + F 75 -6.4 -4.50976 | opp_overlap 3286417 3286426, overlap 3286412 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTCATCTGAAG yqjG 3286461 - 3287447 + | hypothetical protein TERM 4291 3287453 - 3287470 + F 93 -12.7 -3.73647 | CTTTGGCTAATTTCA GGCGTCC TCCG GGACGCC TTATTAATAAATACC TERM 4292 3287904 - 3287926 + G 74 -4.8 -4.77036 | opp_overlap 3287903 3287904 ACGCCGGGCGACAAC CGCTTCGG CCCCGAT CCGAAACG TTTTTCCTGATGGCG yhaH 3287571 - 3287936 + | hypothetical protein TERM 4293 3287937 - 3287973 + T 95 -10.9 -4.64861 | gap 1, opp_overlap 3287961, overlap 3287939 3287942 AAACGTTTTTCCTGA TGGCGGCGCGGCGC CGCTTTTAAA GCGCCGCGC-GCTA TTTATTTTCCGGCGA TERM 4294 3287939 - 3287953 + T 95 -12.8 -4.07568 | overlap 3287937 3287942 ACGTTTTTCCTGATG GCGGCG CGG CGCCGC TTTTAAAGCGCCGCG TERM 4295 3287942 - 3287971 + T 100 -14.3 -3.93868 | gap 1, opp_overlap 3287961, overlap 3287939 3287937 TTTTTCCTGATGGCG GCGCGGCGCCGCTT TTA AAGCGCCGC-GCGC TATTTATTTTCCGGC yhaJ 3288871 - 3287975 - | possible LysR-family transcriptional regulator TERM 4296 3289119 - 3289131 + G 76 -10.5 -3.65542 | opp_overlap 3289107, overlap 3289117 GAACCAGGAAGTGCT GGCGC CGG GCGCC TCTTTTCAGCCTCGA yhaK 3288976 - 3289677 + | hypothetical protein yhaL 3289701 - 3289865 + | putative conserved hypothetical protein TERM 4297 3289905 - 3289868 - T 82 -11.4 -3.57144 | gap 2 GGCCGCAGCCTGAAA TCATGCCGGATGGCGGCG CAAG CGCC-CGATCCGGC-TGA TAACGGGTAGACCCG TERM 4298 3289949 - 3289971 + T 77 -9 -3.99374 | overlap 3289950 3289967 CATCGGGCAACACGC TGCCCCGACG TCA TGCCGGGGCG TTATTATTAATGCGC TERM 4299 3289950 - 3289970 + T 73 -10.3 -2.99142 | overlap 3289949 3289967 ATCGGGCAACACGCT GCCCCGACG TCA TGCCGGGGC GTTATTATTAATGCG yhaN 3291288 - 3289978 - | hypothetical protein TERM 4300 3290751 - 3290764 + g 100 -3.1 -5.95946 | gap 1, opp_overlap 3290746 3290751 AGGTATGAGACAGCA CTC-CC AGT GGCGAG TTTTTTTCTTCTTCC yhaO 3292645 - 3291314 - | putative membrane transport protein TERM 4301 3291656 - 3291643 - G 70 -5.2 -4.46233 | overlap 3291654 GGAATCCTAAATAAA CGCC AAAGAA GGCG GTCATGACGGCAAAG TERM 4302 3292211 - 3292178 - G 73 -5.9 -4.52047 | overlap 3292170 CACCAGACCATAAAA CGGACTATCGGAAAG TAAT CCTTCCGTTACGCCG AAAGTATGCAGATAA TERM 4303 3292455 - 3292445 - G 74 -3.2 -4.88711 | overlap 3292454 AGAAGAGAGTAAAAA GACC CAA AGTC CCATCAGGCCAACCT TERM 4304 3292503 - 3292486 - G 79 -2.7 -5.16841 | GGACAGGAAGAAAAA CGATC CCTGCGCC GATCG CCATCCCGATACTCA TERM 4305 3292880 - 3292899 + r 100 -15 -4.43859 | opp_overlap 3292880 TATCACAACAAAAAA GGGCGCAC GTTG GTGCGCCC TTTTCTCAGCTTCTG TERM 4306 3292899 - 3292880 - R 100 -15 -5.58179 | opp_overlap 3292880 TATCACAACAAAAAA GGGCGCAC GTTG GTGCGCCC TTTTCTCAGCTTCTG tdcG 3294324 - 3292960 - | L-serine dehydratase TERM 4307 3294358 - 3294393 + r 78 -11.9 -3.06915 | gap 1, opp_overlap 3294356 CGTTCAGTGAAGATC CGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACG TTACATCGCCTGAGT tdcE 3296688 - 3294394 - | formate acetyltransferase TERM 4308 3295011 - 3295021 + g 74 -6.8 -4.2558 | CAATAGCAAAGTCGA TGGC AAG GCCA TTTTCGTCGCGAATC TERM 4309 3296216 - 3296184 - G 91 -14.1 -3.05294 | opp_overlap 3296174, overlap 3296174 3296165 GCAAACCGGTTAATA CGCCGGATTTACGGC AGC GCAGCATATCCGGCG AGTAAACATCGAATA TERM 4310 3296284 - 3296315 + g 74 -6.6 -4.35461 | gap 1 ATATTCAAAATCGGC GTCCATTTCGCGGCC ATA GGC-GTGGAATGAAC TTTTGATCATGTTAA tdcD 3297930 - 3296722 - | propionate kinase tdcC 3299328 - 3297997 - | threonine/serine transporter TERM 4311 3299230 - 3299215 - G 74 -4.6 -4.70659 | GCGGATAGGGAAAAA CAGCAC CCCG GCGCCG ATGGCGGTACCAAAT tdcB 3300338 - 3299349 - | catabolic threonine dehydratase TERM 4312 3299989 - 3299999 + g 74 -6.8 -4.35524 | opp_overlap 3299983, overlap 3299983 GCCGAATAATCACAG GTGG CCG CCAC TTTTGACTTTGGCGC tdcA 3301374 - 3300436 - | TDC operon transcriptional activator TERM 4313 3302082 - 3302056 - R 71 -10.3 -2.6914 | gap 1, opp_overlap 3302062, overlap 3302062 CACCGGCCAGATAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAGATGAAACTGA TERM 4314 3302062 - 3302075 + r 87 -9.5 -4.3739 | opp_overlap 3302062 3302056 CCAGATAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGATG TERM 4315 3302075 - 3302062 - R 100 -9.5 -4.96646 | opp_overlap 3302062, overlap 3302056 CCAGATAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGATG TERM 4316 3302190 - 3302164 - R 73 -10.3 -3.04398 | gap 1, opp_overlap 3302170, overlap 3302170 GCCGCCCTGTAAAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAGGTGAAACTGA TERM 4317 3302183 - 3302170 - R 100 -9.5 -5.0925 | opp_overlap 3302170, overlap 3302164 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGGTG TERM 4318 3302170 - 3302183 + r 87 -9.5 -4.3739 | opp_overlap 3302170 3302164 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGGTG garK 3303746 - 3302601 - | glycerate kinase (ec 2.7.1.31) TERM 4319 3302997 - 3303021 + g 70 -9.1 -3.65827 | overlap 3302998 CGCCCCCATACCGCC TGCCGCGCCTG CGC CGGGCGCCGCC TTTACGTCGACATTC TERM 4320 3302998 - 3303020 + g 76 -12.6 -2.79175 | overlap 3302997 GCCCCCATACCGCCT GCCGCGCCTG CGC CGGGCGCCGC CTTTACGTCGACATT TERM 4321 3303397 - 3303359 - G 84 -12.5 -3.33261 | CGCCAATGCCGATAA TGATATTGCTTGCGCCG CTTTC CAGCGCCTGCAATATCA GCTCCCCCGTTCCCC TERM 4322 3303835 - 3303807 - R 71 -10.2 -2.64803 | overlap 3303804 3303803 CCAGCCTGAAATTCA GGCCCGGATCGC TACAC GCCATCCGGGCA CAACGTCGTTAGCGA garR 3304734 - 3303844 - | tartronate semialdehyde reductase (tsar) TERM 4323 3304207 - 3304218 + g 73 -5.8 -4.42788 | CAACGCCACGATCAC CTGG TTAG CCAG TTTTGTGACGTTGCC TERM 4324 3304404 - 3304418 + g 71 -10 -3.57561 | CAACGCCCTTCGCCT TCAGCG CAT CGCTGA TTTCACGGCTTGCCA garL 3305530 - 3304760 - | 5-keto-4-deoxy-D-glucarate aldolase TERM 4325 3304891 - 3304908 + g 76 -12.7 -2.71712 | opp_overlap 3304889 3304888, overlap 3304876 3304890 CCGGCGCCAGAATGC CGCACGG TTTA CCGTGCG CTTTAGCGCGGGCGA TERM 4326 3305045 - 3305014 - G 90 -8 -4.82901 | TTGGGCCGACAAAAA TGCCATCAACGC CTTCCGTT GCGGCGATGGCA TCAACATTGTCGACA TERM 4327 3306088 - 3306098 + G 87 -8.2 -4.53303 | opp_overlap 3306087 AAATTCGCCAGGAAT CGCC ATC GGCG TTTTATATAAAAGTA TERM 4328 3306731 - 3306711 - g 100 -12.5 -4.56597 | overlap 3306713 CTCGGTTGCGAAAAA CTGCAGCCG GAA CGGCTGCTG GAAGGCACCGAGGAT TERM 4329 3306729 - 3306713 - g 78 -13.7 -2.60032 | overlap 3306711 CGGTTGCGAAAAACT GCAGCCG GAA CGGCTGC TGGAAGGCACCGAGG TERM 4330 3306906 - 3306886 - g 74 -10.3 -3.57263 | AGCGCCAGCGCGAAA CCTGCCCGG CCT CCGAGCTGG TCGTCGGGATGCAGT garD 3306060 - 3307631 + | D-galactarate dehydratase TERM 4331 3307679 - 3307707 + F 100 -9.6 -5.055 | gap 1, overlap 3307681 ACCGCATAATCTGTA GACCGGGTAAGCG CCAG CGCT-ACCCGGTA TTTTTTCGCCCTTAG TERM 4332 3307681 - 3307705 + F 95 -12.2 -4.15235 | gap 1, overlap 3307679 CGCATAATCTGTAGA CCGGGTAAGCG CCAG CGCT-ACCCGG TATTTTTTCGCCCTT TERM 4333 3307736 - 3307754 + F 86 -5.3 -5.55664 | opp_overlap 3307739 AGTCTGTAGCCTGAA GTATGTC TGCCC GACATGC TTTTTTTACTCCTGA TERM 4334 3307880 - 3307869 - f 76 -4.4 -4.96996 | TTCAAAGAAAACAAA CGAA AGAT TTCG GAGGAAGGATGTTTA TERM 4335 3308401 - 3308388 - g 78 -2.3 -5.25803 | opp_overlap 3308389, overlap 3308389 AATTTGTAGAAAAAA CGGGT ATCG ACTCG TTAGCCATTGCTATC SEN3091 3307889 - 3308743 + | tagatose-bisphosphate aldolase TERM 4336 3309319 - 3309292 - g 71 -9.8 -3.53091 | gap 1, overlap 3309293 ATGGTTGTCGCTAAA CGCGCCGCCTTGC TTT GCCAGGCAGCG-G AAACGACGGCGACCG SEN3092 3308863 - 3310134 + | putative sugar kinase SEN3093 3310149 - 3310613 + | PTS system, galactitol-specific IIA component SEN3094 3310644 - 3310928 + | PTS system, galactitol-specific IIB component SEN3095 3310932 - 3312305 + | PTS system, galactitol-specific IIC component SEN3096 3312349 - 3313392 + | galactitol-1-phosphate dehydrogenase SEN3097 3313503 - 3314276 + | galactitol utilization operon repressor yraL 3315297 - 3314434 - | hypothetical protein TERM 4337 3315356 - 3315345 - H 79 -3 -5.41143 | overlap 3315348 CATTGCGTAAAAAAA TATC ACTG GATA CAGTATGGTACCCTC TERM 4338 3315766 - 3315739 - gH 78 -6.4 -4.61873 | gap 1, opp_overlap 3315765, overlap 3315760 CTGGATAAACTAAAA CCTGCCGACTTTG CGC CAAA-TCAGCAAG CGCGTTACTGGCAGG TERM 4339 3316826 - 3316804 - gH 80 -6.2 -4.8048 | overlap 3316805 GTGTTACAGCAAAAA TTCGGCTCCG TAG CCGAGCTGAA AATGGGCGTGAACGG TERM 4340 3316820 - 3316805 - gH 72 -9 -3.47806 | overlap 3316804 TGTTACAGCAAAAAT TCGGCT CCGT AGCCGA GCTGAAAATGGGCGT yraM 3315361 - 3317403 + | possible exported protein TERM 4341 3317453 - 3317412 - gf 72 -9.3 -3.61268 | gap 1, overlap 3317404 3317415 CAGCTAACGCGTAAA CAGGCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC-TG GAAAGCAAAGGACTG TERM 4342 3317451 - 3317415 - gf 76 -12.1 -2.62667 | overlap 3317404 3317412 CTAACGCGTAAACAG GCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC TGGAAAGCAAAGGAC yraN 3317361 - 3317756 + | hypothetical protein yraO 3317778 - 3318368 + | probable phosphoheptose isomerase yraP 3318378 - 3318953 + | possible lipoprotein yraR 3319688 - 3319020 - | hypothetical protein TERM 4343 3319944 - 3319927 - g 89 -3.3 -5.72207 | GTGAAAGGAAAAAAA GGCGAGG CCAG CGTCACC ATTGATAAGGCTATT yhbO 3319786 - 3320304 + | hypothetical protein yhbP 3320727 - 3320284 - | hypothetical protein yhbQ 3320765 - 3321082 + | hypothetical protein yhbS 3321572 - 3321069 - | putative acetyltransferase yhbT 3322090 - 3321566 - | hypothetical protein TERM 4344 3322363 - 3322376 + G 80 -9.5 -4.06491 | opp_overlap 3322363 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4345 3322376 - 3322363 - g 83 -9.5 -4.18018 | opp_overlap 3322363 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4346 3322485 - 3322445 - g 95 -3.4 -5.81412 | gap 2 TTTACCGAAAAAAAA TTGCAG-GAAGC-GGTGA GTTTTGT TCACCAGCATCGCCGCAA ATTACACATCGCCAT yhbU 3322307 - 3323302 + | putative protease TERM 4347 3324117 - 3324105 - g 75 -6.9 -4.4078 | overlap 3324106 3324107 TCGCGCTAACGAAAA CGGCG GCG CGCCA TTAGCGCTTGCCGCG yhbV 3323311 - 3324189 + | hypothetical protein TERM 4348 3325271 - 3325237 - g 71 -8.4 -3.89215 | overlap 3325231 GGTGATAAAGCGAAA GTCCGCCACGGGCTGG AAT CCATCCTGCGGGAGAC CCAGGCGGATGAAAT yhbW 3324367 - 3325374 + | possible monooxygenase SEN3112 3326071 - 3325352 - | hypothetical protein TERM 4349 3325382 - 3325418 + g 100 -7.3 -5.42259 | opp_overlap 3325383, overlap 3325383 TGGGCTGATTTTATA ACGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCGA TTTTTTTCGAAGTAA TERM 4350 3325383 - 3325417 + g 80 -10.8 -3.84633 | opp_overlap 3325383, overlap 3325382 GGGCTGATTTTATAA CGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCG ATTTTTTTCGAAGTA TERM 4351 3325482 - 3325494 + g 73 -9.1 -3.77927 | overlap 3325481 TATTCCGGCCATGCT TGCGC CTG GCGCA TATTTTCGTCATTCA TERM 4352 3325728 - 3325741 + g 74 -6.7 -4.25056 | TGATAGCGGCTGTTT GGGTT AAGC AACCC TTTGTTGGTGGCATA TERM 4353 3326021 - 3326009 - G 75 -3.5 -4.88067 | AGTGAGCCAGAAAAA TTTTA AAA TAAAA GCGATAAACAGGCTC SEN3113 3326230 - 3326760 + | putative conserved hypothetical protein mtr 3327981 - 3326821 - | probable amino acid permease TERM 4354 3328147 - 3328181 + r 82 -7.8 -4.55798 | opp_overlap 3328153, overlap 3328149 3328151 3328153 AGTACAAAAGAAATA AAAAAAGCCCCGATTG TGA CGATCGGGGCTGTATA TTTTACTTTACGCTG TERM 4355 3328149 - 3328179 + r 84 -10.4 -3.88396 | opp_overlap 3328153, overlap 3328147 3328151 3328153 TACAAAAGAAATAAA AAAAGCCCCGATTG TGA CGATCGGGGCTGTA TATTTTACTTTACGC TERM 4356 3328151 - 3328177 + r 90 -13 -3.51998 | opp_overlap 3328153, overlap 3328149 3328147 3328153 CAAAAGAAATAAAAA AAGCCCCGATTG TGA CGATCGGGGCTG TATATTTTACTTTAC TERM 4357 3328175 - 3328153 - R 100 -13.4 -6.11392 | opp_overlap 3328151 3328149 3328147 3328153 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT TERM 4358 3328153 - 3328175 + r 100 -15.6 -3.31476 | opp_overlap 3328153, overlap 3328151 3328149 3328147 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT deaD 3330108 - 3328219 - | ATP-dependent RNA helicase (dead-box protein) TERM 4359 3328940 - 3328950 + g 73 -5.4 -4.56597 | AGTTGCTGTTGAACT TTCG CGG CGAA TTTTTCCAGACGGCG TERM 4360 3330253 - 3330228 - R 73 -7.5 -4.04023 | overlap 3330229 ATTAACGAACAACAA CGCCCTCACCC GCGA AGGTGATGGCA ATCAAAAAGATTACG nlpI 3331171 - 3330287 - | hypothetical protein TERM 4361 3331242 - 3331276 + r 76 -12 -2.56715 | opp_overlap 3331249, overlap 3331237 AAGGCGTCCAGCCAG GTCTAAAGCCCTCCGC ACT GCGGAGGGCAAAAGGC TACCTTACTCGGCCT TERM 4362 3331269 - 3331249 - R 100 -18.3 -3.57792 | opp_overlap 3331242 3331237 CCAGCCAGGTCTAAA GCCCTCCGC ACT GCGGAGGGC AAAAGGCTACCTTAC pnp 3333416 - 3331281 - | polynucleotide phosphorylase TERM 4363 3333635 - 3333619 - R 100 -10.8 -5.00884 | opp_overlap 3333618 3333616 3333619 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC TERM 4364 3333619 - 3333635 + r 71 -10.8 -2.71422 | opp_overlap 3333619, overlap 3333618 3333616 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC rpsO 3333927 - 3333658 - | 30S ribosomal subunit protein S15 TERM 4365 3333762 - 3333783 + g 84 -2.9 -5.34555 | opp_overlap 3333755 3333764, overlap 3333764 3333765 AAACCATACGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTATGCTCTGC truB 3335022 - 3334078 - | tRNA pseudouridine 55 synthase (psi55 synthase) (p35 protein) TERM 4366 3334879 - 3334911 + g 75 -12.6 -2.6176 | overlap 3334878 GCCGGTCGCCAGCGG GTCCAGCGCGCCGG TATGC CCGGCGCGGTTGGC ATTGTAGATGCGCTT rbfA 3335423 - 3335022 - | ribosome-binding factor A (P15B protein) TERM 4367 3335453 - 3335467 + r 88 -8.5 -4.86939 | opp_overlap 3335453 AATAAAGACAAAAAA GGGGC CATAA GCCCC TTTTTAAATTTCTTG TERM 4368 3335467 - 3335453 - R 100 -9.2 -5.61913 | opp_overlap 3335453 AATAAAGACAAAAAA GGGGCC ATA AGCCCC TTTTTAAATTTCTTG infB 3338322 - 3335644 - | protein chain initiation factor 2 TERM 4369 3337510 - 3337521 + g 84 -5.8 -5.00616 | ATCGGCTTTGGATTC GGCA TGTT TGCC TTTTTTCGCCGGACG TERM 4370 3338173 - 3338163 - G 74 -8.2 -3.96624 | opp_overlap 3338146 TATCGGGACCAGAAA CCGC TTC GCGG TTCAGGTGCGCCAGT nusA 3339849 - 3338347 - | L factor TERM 4371 3339255 - 3339267 + g 71 -10.5 -3.31144 | opp_overlap 3339250 GGGTGACGAACAGCT GCGCG CCA CGCGC TTCTGGACGTACAGC TERM 4372 3339790 - 3339801 + g 75 -3.6 -4.8622 | TTCAAAAATTTTTTC GCGT GGCA GCGC TTTTTCGTTGGAGAC yhbC 3340299 - 3339877 - | hypothetical protein TERM 4373 3340366 - 3340354 - H 93 -6.9 -5.80248 | opp_overlap 3340353 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4374 3340395 - 3340410 + H 72 -10.4 -2.79878 | opp_overlap 3340395, overlap 3340394 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA TERM 4375 3340410 - 3340395 - H 100 -10.4 -5.60689 | opp_overlap 3340395 3340394 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA argG 3340957 - 3342300 + | argininosuccinate synthetase TERM 4376 3342322 - 3342337 + F 100 -11.8 -5.4505 | opp_overlap 3342322 GTCGTTGATGCAACA GGCCGC GAAA GCGGCC TTTTTTATTGCCAGC TERM 4377 3342337 - 3342322 - f 78 -11.8 -3.08679 | opp_overlap 3342322 GTCGTTGATGCAACA GGCCGC GAAA GCGGCC TTTTTTATTGCCAGC TERM 4378 3342627 - 3342612 - g 72 -2.5 -4.95896 | overlap 3342623 AGAAATTCAGAAAAA TCACC AACATA GGCGA GTATTCTCCACTGCT SEN3125 3342458 - 3343417 + | hypothetical protein TERM 4379 3343495 - 3343462 - T 70 -9.7 -3.06696 | opp_overlap 3343471, overlap 3343471 TCCGTTTTCAACAGA CGAAAAAAAGACGCT TTTC AGCGTCTTTTTCCTG GAATATTGGTACCGA TERM 4380 3343471 - 3343486 + T 93 -9 -4.74132 | opp_overlap 3343462 3343471 AACAGACGAAAAAAA GACGCT TTTC AGCGTC TTTTTCCTGGAATAT TERM 4381 3343486 - 3343471 - T 100 -9 -5.62219 | opp_overlap 3343471, overlap 3343462 AACAGACGAAAAAAA GACGCT TTTC AGCGTC TTTTTCCTGGAATAT secG 3343934 - 3343602 - | protein-export membrane protein TERM 4382 3344122 - 3344137 + r 100 -11.8 -4.77157 | TTTTGCGGGCCGTAA GGCGGC AACC GCCGCC TTTTTAGTCACTTAA mrsA 3345494 - 3344157 - | PGM/PMM-family protein folP 3346335 - 3345487 - | dihydropteroate synthase TERM 4383 3346381 - 3346400 + r 79 -10.6 -3.6502 | opp_overlap 3346381 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA TERM 4384 3346400 - 3346381 - R 100 -12.8 -5.86609 | opp_overlap 3346381 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA hflB 3348374 - 3346440 - | cell division protein TERM 4385 3347472 - 3347440 - G 91 -11.9 -4.11394 | opp_overlap 3347431 3347462 ACCTGACGGTCAAAA CGACCTGGACGCAGC AGC GCCGGGTCCAGAACG TCCGGACGGTTGGTT ftsJ 3349104 - 3348478 - | cell division protein TERM 4386 3349006 - 3349018 + g 77 -4.7 -4.84761 | opp_overlap 3348997 3349000, overlap 3349000 TTTAAACCAGGCACG GGAGC GTA GCCCC TTTTTCTGCGCCTGT TERM 4387 3349272 - 3349255 - g 90 -4.9 -5.34309 | gap 1 AGTACTAAACAAAAA CAGCACCT AAA AGGT-CTG GCACATCCGCTCAAG yhbY 3349231 - 3349524 + | hypothetical protein TERM 4388 3349610 - 3349637 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3349617, overlap 3349617 CACGCTCTCTCCGTT GATAAAAGGCCGC TAT GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4389 3349631 - 3349617 - T 95 -12.8 -4.36914 | opp_overlap 3349610 3349617 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA TERM 4390 3349617 - 3349631 + T 100 -12.8 -5.13137 | opp_overlap 3349617, overlap 3349610 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA greA 3350156 - 3349680 - | transcription elongation factor TERM 4391 3349718 - 3349729 + g 77 -7.2 -4.25104 | CTTCGTATTCCACAT CGCC GCCA GGCG TTTTGATCACCACGA TERM 4392 3350286 - 3350259 - H 70 -4.8 -4.46828 | AGAAGCAAAAAAACA CCAACCCGGG CGCGCAGT CCCAGGTCAG CTACAATTTCCTCTT TERM 4393 3350875 - 3350845 - g 71 -7.4 -3.97947 | GCCAGCCACGATAAA GCGCCAGGCTGGCC GTG GAACGACCTGACGC AGTGTTTCAGCGCGC dacB 3350404 - 3351837 + | Penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) TERM 4394 3351901 - 3351920 + T 85 -12.8 -3.41587 | opp_overlap 3351901 3351902, overlap 3351896 ACGAACATAATAAAA TGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC TERM 4395 3351920 - 3351901 - T 100 -10.6 -4.91285 | opp_overlap 3351901 3351896, overlap 3351902 ACGAACATAATAAAA TGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC TERM 4396 3351919 - 3351902 - T 93 -14.1 -3.53144 | opp_overlap 3351901 3351896, overlap 3351901 CGAACATAATAAAAT GGGCCGC AAAT GCGGCCC GTTGGCTTTTGTAGG yhbZ 3353140 - 3351968 - | probable GTP-binding protein TERM 4397 3352318 - 3352334 + g 71 -7.9 -3.94933 | opp_overlap 3352307, overlap 3352315 3352320 ACCAGCGCGGTTTAG CCGCCAG ATC CTGGCTG TATTTTTCCAGTTCG SEN3135 3354166 - 3353156 - | hypothetical protein TERM 4398 3353932 - 3353945 + g 75 -3.7 -4.91852 | opp_overlap 3353913 3353932 GCTTACGAAAAATAC GCAGC GGCG GCAGC TTTCTTTTTACTGCC TERM 4399 3354202 - 3354222 + r 100 -14 -3.794 | opp_overlap 3354202 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG TERM 4400 3354222 - 3354202 - R 100 -14 -4.75174 | opp_overlap 3354202 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG rpmA 3354508 - 3354251 - | 50S ribosomal subunit protein L27 rplU 3354839 - 3354528 - | 50S ribosomal subunit protein L21 TERM 4401 3356003 - 3355979 - g 76 -9.3 -3.95051 | opp_overlap 3355985, overlap 3355971 GAAGAAGCCGACAAA GCGATATCCGC GTT GCAGATATTGC CGGATACCCCATGGC ispB 3355097 - 3356068 + | octaprenyl-diphosphate synthase nlp 3356300 - 3356587 + | Ner-like regulatory protein TERM 4402 3356629 - 3356600 - T 83 -10 -4.08692 | opp_overlap 3356603, overlap 3356603 TAAGCGCCTGTAAAA TACCCCCCGCAA TCGCGT TCGCGGGGGTTA TTCAGCGTACAGAAG TERM 4403 3356603 - 3356626 + T 75 -9.6 -3.63515 | gap 1, opp_overlap 3356600 3356603 GCGCCTGTAAAATAC CCCCCGC-AAT CGC GTTCGCGGGGG TTATTCAGCGTACAG TERM 4404 3356626 - 3356603 - T 77 -11.7 -2.78032 | opp_overlap 3356603, overlap 3356600 GCGCCTGTAAAATAC CCCCCGCAA TCGCGT TCGCGGGGG TTATTCAGCGTACAG murA 3357905 - 3356646 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase yrbA 3358252 - 3357959 - | hypothetical protein TERM 4405 3358377 - 3358395 + r 71 -10.3 -2.62192 | opp_overlap 3358343, overlap 3358376 3358372 TCATGCGAAGTGTAG GCCGGAT AAACC ATCCGGC ATTCATTACATACGG yrbB 3358697 - 3358401 - | possible anti-sigma factor antagonist TERM 4406 3358481 - 3358497 + g 74 -2.1 -5.12617 | opp_overlap 3358457, overlap 3358482 TAACGCCAGACAGCG ACACGGC ATT GCCCTGC TTTTTTGCCTGGTTC yrbC 3359332 - 3358697 - | possible exported protein yrbD 3359902 - 3359351 - | possible exported protein yrbE 3360689 - 3359907 - | hypothetical protein TERM 4407 3359993 - 3359954 - G 70 -10 -3.3164 | gap 1, opp_overlap 3359966 AATCCAGCCCCAGAA CGGCCAACGATGCGTGAAC CAC GGT-ACGCGTCGTTGCCCG GCTAATCCCGGCAGA TERM 4408 3360561 - 3360548 - G 74 -8.1 -4.0162 | opp_overlap 3360552, overlap 3360533 CGCCCACATTATAAA GCTGG CGCA CCAGC AGCGGCGCATGTTTG yrbF 3361509 - 3360697 - | possible ABC-transport protein, ATP-binding component TERM 4409 3362223 - 3362246 + G 73 -8.8 -3.8211 | gap 1, opp_overlap 3362191 CTGGCGGAGCTGCCG CGCGAAGGCGG GCT CC-CCGTCGCG TTCTTATGGCTGGGC TERM 4410 3362462 - 3362424 - g 74 -7.4 -4.07568 | opp_overlap 3362423 3362422, overlap 3362432 GCCGGCGTGCGAAAA GGCGAAAATGATATTGCC GTT GGTAATCTCATTGGCGCC AATATTTTTAATCTC yrbG 3361764 - 3362699 + | hypothetical protein yrbH 3362713 - 3363699 + | hypothetical protein TERM 4411 3364047 - 3364025 - g 74 -9.8 -3.66844 | opp_overlap 3364030 GGGACAGTCGAATAA GCTGATCGCC TTT AGCGATCTGC TGGAAAAACTGGTCA yrbI 3363720 - 3364286 + | hypothetical protein yrbK 3364283 - 3364858 + | possible exported protein TERM 4412 3365262 - 3365248 - gf 73 -5.7 -4.37886 | TTACCGGCGACAAAA TCACC TACCT GGTGA AAGAGCAGAAAATGC TERM 4413 3365363 - 3365349 - gf 76 -3.4 -5.05037 | overlap 3365350 CAAGACAAAAACAAA GGCCAG ACT CCGGCG CAAAAGAAGAGTAAC yhbN 3364827 - 3365381 + | hypothetical protein yhbG 3365388 - 3366113 + | probable ABC transport protein, ATP-binding component TERM 4414 3367165 - 3367155 - g 74 -3.2 -4.84017 | overlap 3367143 3367164 AATGGCTGATAAAAA GCCT TGA AAGC CGCAACGACACGCTG TERM 4415 3367198 - 3367164 - g 76 -10.7 -3.61889 | gap 1, overlap 3367155 3367176 TAAAAAGCCTTGAAA GCCGCAAC-GACACGC TGCT GCGCGTCAGTCGCTGC ATCGTCGAGCAACAG rpoN 3366161 - 3367594 + | RNA polymerase sigma-54 factor (sigma-N) yhbH 3367617 - 3367904 + | probable sigma(54) modulation protein TERM 4416 3367932 - 3367958 + F 95 -13 -3.92522 | overlap 3367927 3367933 TTAGCCAGTGCAGGA CGGCCTGTTGTG TGA CACAACGGGCCA TTTGTACAGTTAGCG TERM 4417 3367933 - 3367957 + F 100 -16.5 -2.95192 | overlap 3367927 3367932 TAGCCAGTGCAGGAC GGCCTGTTGTG TGA CACAACGGGCC ATTTGTACAGTTAGC ptsN 3368022 - 3368513 + | nitrogen regulatory IIA protein yhbJ 3368559 - 3369413 + | hypothetical protein TERM 4418 3369464 - 3369445 - g 70 -9.2 -3.75105 | overlap 3369438 TGAAGTCACCAATAA GCTGGGCA TGCA TGCCCGGC CTGCCATGAAGCTTT ptsO 3369410 - 3369682 + | phosphocarrier protein (nitrogen related hpr) yrbL 3369932 - 3370564 + | hypothetical protein mtgA 3371367 - 3370639 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4419 3371286 - 3371249 - G 87 -8.3 -4.58663 | overlap 3371272 ATCACCGCCGAAAAA GGCACCGGAACCACGCT AAAC AGCGCAATGCCGCCGCC CCAAAAGACGGCGAG TERM 4420 3371344 - 3371358 + g 73 -9.2 -3.84246 | opp_overlap 3371339 GCGCAAAAACGTTAA CGGCGC GAT GCGTCG TTTGCTCATTCCGCC yhbL 3372017 - 3371364 - | hypothetical protein TERM 4421 3372224 - 3372246 + r 100 -7.6 -5.77853 | overlap 3372225 3372227 TGGCGCAGTATTCGC GCACCCCGGT CAA ACCGGGGTCA TTTTTTTTCCGCGTT TERM 4422 3372225 - 3372245 + r 89 -11.1 -4.05085 | overlap 3372224 3372227 GGCGCAGTATTCGCG CACCCCGGT CAA ACCGGGGTC ATTTTTTTTCCGCGT TERM 4423 3372227 - 3372243 + r 93 -13.7 -3.60685 | overlap 3372225 3372224 CGCAGTATTCGCGCA CCCCGGT CAA ACCGGGG TCATTTTTTTTCCGC arcB 3374580 - 3372244 - | aerobic respiration control sensor protein TERM 4424 3373387 - 3373377 - G 70 -5.4 -4.44974 | TCAAATTCCATAAAA TCTG GCG CAGA CGCGTTCCGTCGGTA yhcC 3375603 - 3374674 - | hypothetical protein TERM 4425 3377451 - 3377439 - g 80 -10.5 -3.86822 | GAAGTGGTCGAGAAA GGCCG CGT CGGCC CAGGCGAGCTGATGG TERM 4426 3378598 - 3378582 - g 74 -10.8 -3.55622 | CTGAATCTCTCCAAA CGCGCC TGGCT GGCGCG CAAACCCATTAGCCC TERM 4427 3379083 - 3379069 - g 71 -11.4 -2.90573 | overlap 3379068 TGATTCAGATTAAAG TCGCGC AGG GCGCGA AACCGGGCGAAGGCG TERM 4428 3379910 - 3379889 - g 83 -10.1 -4.21812 | CTGCACCGAAAATAA CCCGCCGTT TGAT AACGGCGTG CTGAATGCGCAACTG gltB 3376275 - 3380735 + | glutamate synthase [NADPH] large chain precursor TERM 4429 3381232 - 3381199 - g 84 -13.1 -3.36175 | gap 1, overlap 3381186 AACGGGTAGCGATAA TCGGCGCAGGTCCGGC AGG GCTGG-CGTGCGCCGA CGTGCTGACCCGCAA gltD 3380745 - 3382163 + | glutamate synthase (NADPH) small chain TERM 4430 3382170 - 3382210 + F 73 -11 -2.52519 | gap 1, overlap 3382169 3382167 GAAGTATAACCCTTC CGGCTCCCC-GCTTACTGC CTTG GCTGATGGCTGGGGAGCCG ATATTCCTCTCCTCA TERM 4431 3382598 - 3382614 + G 83 -7.9 -4.56597 | opp_overlap 3382600, overlap 3382600 TCGGTAGATTTAAGT CAGCGCT ATA AGCGCGG TTTTTCCACCAGAAA TERM 4432 3382706 - 3382671 - g 100 -17.2 -3.06696 | gap 1, opp_overlap 3382677, overlap 3382677 TTTGTTTTCAACACA TTG-AAATTCCGCAGAC ACT GTCTGCGGAATTTTCAA ATCTCATACCGCTCG TERM 4433 3382677 - 3382699 + G 100 -16.4 -4.17657 | opp_overlap 3382671 3382677 TTCAACACATTGAAA TTCCGCAGAC ACT GTCTGCGGAA TTTTCAAATCTCATA TERM 4434 3382699 - 3382677 - g 100 -16.4 -3.76775 | opp_overlap 3382677, overlap 3382671 TTCAACACATTGAAA TTCCGCAGAC ACT GTCTGCGGAA TTTTCAAATCTCATA yhcG 3382370 - 3383473 + | hypothetical protein TERM 4435 3384270 - 3384280 + G 91 -6.8 -5.14563 | AGCGCCGTACTGATT GCGA TGG TCGC TTTTTTCCTCGGCAA SEN3166 3383589 - 3384842 + | cytosine permease SEN3167 3384829 - 3386109 + | cytosine deaminase yhcH 3386658 - 3386191 - | hypothetical protein TERM 4436 3386548 - 3386559 + g 71 -7.2 -3.96327 | opp_overlap 3386546 GCCCTGCAATTCATA GCGC CCCG GCGC TTTCTCCTGCGGCCT nanK 3387530 - 3386655 - | possible kinase nanE 3388216 - 3387527 - | putative N-acetylmannosamine-6-phosphate 2-epimerase 2 (ec 5.1.3.9) (mannac-6-p epimerase 2) TERM 4437 3388259 - 3388233 - R 77 -9.4 -3.86346 | overlap 3388235 CTACTCCCTTACAAA TATTGCCCGGTT GAA AACCGGGCAAGC GGATTAACTTTTCGT TERM 4438 3388257 - 3388235 - R 100 -16.4 -3.52113 | overlap 3388233 ACTCCCTTACAAATA TTGCCCGGTT GAA AACCGGGCAA GCGGATTAACTTTTC nanT 3389753 - 3388263 - | putative sialic acid transporter TERM 4439 3388500 - 3388527 + g 70 -9.7 -3.35679 | CGCTCCCAGGATCGG CGCCAGCGCGC CGCCGA GCGCGCCGACG TTATAAGTAAAGCCC TERM 4440 3388930 - 3388904 - G 71 -11.6 -2.92386 | overlap 3388901 3388899 GGAAAGCAAACAGTA CCACCAGCATCA GCA TGACGCCAGTGG GCCAGCGTTTACCGC nanA 3390762 - 3389869 - | N-acetylneuraminate lyase TERM 4441 3390889 - 3390904 + r 79 -3.2 -5.32608 | overlap 3390883 AACCGGGATCGGAGG TGCGAT CGCT ACCGCA TTTTTTGACTTTTTT yhcK 3391688 - 3390897 - | putative GntR-family transcriptional regulator TERM 4442 3391771 - 3391796 + r 76 -7.5 -4.25256 | opp_overlap 3391775, overlap 3391775 GCGAGGAGGCCAAAC AAAACAGGCCC TTCA GGGCCTGTTGA TTATTTTACTACGCG TERM 4443 3391792 - 3391775 - R 100 -12.7 -4.88918 | opp_overlap 3391775 3391771 GGAGGCCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA TERM 4444 3391775 - 3391792 + r 93 -12.7 -3.70405 | opp_overlap 3391775, overlap 3391771 GGAGGCCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA sspB 3392297 - 3391797 - | stringent starvation protein B sspA 3392941 - 3392303 - | stringent starvation protein A SEN3176 3393956 - 3393204 - | hypothetical protein TERM 4445 3394117 - 3394104 - R 100 -9.5 -5.64274 | opp_overlap 3394104 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG TERM 4446 3394104 - 3394117 + r 100 -9.5 -5.08824 | opp_overlap 3394104 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG rpsI 3394548 - 3394156 - | 30S ribosomal subunit protein S9 rplM 3394992 - 3394564 - | 50S ribosomal subunit protein L13 yhcM 3396418 - 3395294 - | putative ATP/GTP-binding protein TERM 4447 3396204 - 3396230 + g 81 -6.6 -4.68994 | CACATATACAGCCCG CGAACCGG TATTTGCGCGT CCGGTTCG TTTTTGCCTAATAAT yhcB 3396605 - 3397009 + | hypothetical protein TERM 4448 3397034 - 3397052 + F 79 -11.7 -3.13082 | opp_overlap 3397032, overlap 3397032 3397030 GTTAAGAAATTTATC GGGCGCA TCGCT TGCGCCC TCTCTCTATCTTTCC TERM 4449 3398390 - 3398364 - g 77 -3.5 -5.02476 | opp_overlap 3398365, overlap 3398365 3398367 ATAGCGTCGAAAAAA GCAGTCCTGCC GCGCA GGCCGGTTTGC AAAAAGATGATGTTA TERM 4450 3398410 - 3398396 - g 83 -7.2 -4.56597 | GCCGGTTTGCAAAAA GATGAT GTT ATCATC GGCGTTAACCGCGAT degQ 3397166 - 3398533 + | serine protease degS 3398626 - 3399696 + | serine protease TERM 4451 3399721 - 3399699 - T 100 -12 -4.4078 | opp_overlap 3399683 3399702 GGCGTCGAACTAAAA CGACGCGG CTTTTGC CCGCGTCG TTCGACGACTAGTCA SEN3183 3400461 - 3399730 - | hypothetical protein TERM 4452 3399912 - 3399929 + g 70 -7 -4.07568 | GTTGCGCCTGTTGAC GCGCAT ACTGCG ATGCGC TTTTCCAGGCAACCA TERM 4453 3400446 - 3400470 + g 74 -11.4 -3.20991 | overlap 3400442 CTGTGTCCTCATTTT GCGGGAGCAG AATCA CTGCTCCCGA TTAGATTGGATTACA SEN3184 3401782 - 3400481 - | oxaloacetate decarboxylase beta chain SEN3185 3403567 - 3401795 - | oxaloacetate decarboxylase alpha chain TERM 4454 3402208 - 3402224 + g 74 -7.2 -4.10453 | opp_overlap 3402206 3402207, overlap 3402196 3402206 GTACCGGCTCAAACG CCGCCG GGTTG TGGCGG TTTTCGAGGAATTTG SEN3186 3403825 - 3403583 - | oxaloacetate decarboxylase gamma chain (ec 4.1.1.3) SEN3187 3404599 - 3403982 - | tartrate dehydratase SEN3188 3405498 - 3404599 - | tartrate dehydratase SEN3189 3406799 - 3405531 - | possible membrane transport protein TERM 4455 3406256 - 3406267 + g 78 -5.8 -4.74706 | TGCCGCAGATGAGCA TCGG GAGA CCGA TTTTTGCGTATTCAA SEN3190 3407675 - 3407010 - | LysR-family transcriptional regulator SEN3191 3408291 - 3407662 - | possible GntR-family transcriptional regulator TERM 4456 3408192 - 3408210 + g 75 -5.9 -4.66537 | CCGCAATACTTTCCT GCGCGAG TTCTT CTCCCGC TTTTATATTGCCGGA TERM 4457 3408394 - 3408375 - R 95 -12.8 -3.98913 | overlap 3408387 TTTACAGTCAAAGAA GCCGGAGC AAAA GCCCCGGC ATCGGGCAGGAACAG mdh 3409349 - 3408411 - | malate dehydrogenase TERM 4458 3408579 - 3408565 - G 70 -5.6 -4.38927 | GGCTGAGAGAAGAAA CGGGCA TAC TGACCG TCGCCTTCCACATAG TERM 4459 3408917 - 3408927 + g 75 -4 -4.95155 | opp_overlap 3408901 CCAGCGTGGTAACGC CAAA CAG TTTG TTTTTGTCGTATACG argR 3409764 - 3410234 + | arginine repressor TERM 4460 3410239 - 3410269 + F 80 -6 -4.95155 | overlap 3410240 3410241 AAGAGCTTTAGTCCC ACTTCCTCCGTCGT CGT ACGGCGGAGGCACC TTTTTGTCCTCTCCC TERM 4461 3410240 - 3410268 + F 75 -9.5 -3.5637 | overlap 3410239 3410241 AGAGCTTTAGTCCCA CTTCCTCCGTCGT CGT ACGGCGGAGGCAC CTTTTTGTCCTCTCC TERM 4462 3410241 - 3410267 + F 81 -13 -2.73099 | overlap 3410240 3410239 GAGCTTTAGTCCCAC TTCCTCCGTCGT CGT ACGGCGGAGGCA CCTTTTTGTCCTCTC TERM 4463 3410473 - 3410463 - f 79 -2.6 -5.27923 | opp_overlap 3410463, overlap 3410468 TAACGTTATAAAAAA TAAA ATT TTTA ATGTCTTTAAAAAGC TERM 4464 3410486 - 3410468 - f 85 -3.3 -5.49579 | opp_overlap 3410463, overlap 3410463 TTATAAAAAATAAAA TTTTTAA TGTCT TTAAAAA GCAGAAACAATTAGC yhcN 3410599 - 3410862 + | hypothetical protein SEN3195 3410966 - 3411232 + | hypothetical protein TERM 4465 3411259 - 3411277 + T 100 -13.1 -5.47914 | CTAACCCGACGACTT GCCCCCG CCTGT CGGGGGC TTTTTTATGCTTTTT yhcO 3411564 - 3411292 - | hypothetical protein TERM 4466 3411508 - 3411521 + g 74 -6.7 -4.3623 | opp_overlap 3411520 CGTCTGCGTAAACTC GCGAT AAAA ATCGC TTTGGTTTTTAATAT TERM 4467 3411584 - 3411597 + r 72 -6.7 -4.30576 | overlap 3411582 AGCCACCATCCCCGA CAGAC AATT GTCTG TTTTACTACTAAGCA TERM 4468 3411654 - 3411671 + r 74 -3.3 -5.03994 | AAACGCTTTTAGCCC CGGAGCA CTCT TGCGCTG TTTTTGTATCTCAAA TERM 4469 3411725 - 3411707 - R 100 -8.1 -5.65177 | opp_overlap 3411707 ATAGTCATAAAAAAA CCGACGC TTTTG GCATCGG TTCTTGTGGGTTAGC yhcP 3413703 - 3411736 - | hypothetical protein yhcQ 3414641 - 3413709 - | possible exported protein TERM 4470 3414288 - 3414329 + g 72 -3.5 -4.72272 | gap 1, overlap 3414289 3414316 CTCTTCCCGGGACAT CGCCTGTACGCCGAGGCG ATTACGG CGAC-CGGCTTCCTGGCG TTTTTCCTGCGCCAG TERM 4471 3414529 - 3414517 - G 86 -10.5 -4.08394 | ACATCGGCGCTAAAA CGCGC GTC GCGCG TCCAGGGAGATTCGG yhcR 3414852 - 3414649 - | hypothetical protein yhcS 3415034 - 3415963 + | probable LysR-family transcriptional regulator TERM 4472 3416028 - 3416085 + T 70 -9.3 -3.32844 | gap 3, opp_overlap 3416067, overlap 3416029 GCTGACATTTCCTGA TGGCGCTGCGCTTATCAGGCCTG-GGCG GCACA CACCACAGGCCTGATAAG-GCGG-GCAG TTATGCGGTGCCGCC TERM 4473 3416029 - 3416084 + T 71 -10.6 -2.59564 | gap 3, opp_overlap 3416067, overlap 3416028 CTGACATTTCCTGAT GGCGCTGCGCTTATCAGGCCTG-GGCG GCACA CACCACAGGCCTGATAAG-GCGG-GCA GTTATGCGGTGCCGC tldD 3417531 - 3416086 - | TldD protein TERM 4474 3416910 - 3416943 + g 70 -8.7 -3.69332 | gap 1, opp_overlap 3416911, overlap 3416911 AATACTCATAACCAA AGCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGCG TTTACCGTCTTCTTC TERM 4475 3416911 - 3416942 + g 72 -12.2 -2.80876 | gap 1, opp_overlap 3416911, overlap 3416910 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4476 3416942 - 3416911 - G 90 -12.2 -4.0127 | gap 1, opp_overlap 3416911 3416910 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4477 3417187 - 3417203 + g 74 -4.4 -4.75776 | gap 1 GTAGAGCGGCTGATG CGCTACG GCGG CG-AGCG TTTTTACCTTGCCTT yhdP 3421389 - 3417676 - | possible exported protein cafA 3423056 - 3421587 - | ribonuclease G TERM 4478 3421799 - 3421810 + g 75 -5.8 -4.62069 | opp_overlap 3421797 3421799 TGATCTCATAACAGA CGGT TTCC ACCG TTTTTACCGTCCCGC TERM 4479 3422413 - 3422392 - G 71 -10.1 -3.55444 | TGCGCATCGGCGAAA TCGCGCAGC ACGC GCTGCGCCA GCGCCAGTTCGCCAT TERM 4480 3422441 - 3422454 + g 71 -4.5 -4.62783 | CATACATCTGGTAGC GCGTT TGCG GACGC TTTTTGCGCTCCATG yhdE 3423639 - 3423046 - | hypothetical protein mreD 3424139 - 3423648 - | rod shape-determining protein mreC 3425191 - 3424139 - | rod shape-determining protein TERM 4481 3424868 - 3424897 + g 71 -7.7 -3.96148 | overlap 3424876 ACGCAGCGGCGACCC CAGCAGCTCGCGC AACC GCGCGTTCTCCTG TTTGTACTGCCCCAG TERM 4482 3424876 - 3424889 + g 71 -9.5 -3.59024 | overlap 3424868 GCGACCCCAGCAGCT CGCGC AACC GCGCG TTCTCCTGTTTGTAC TERM 4483 3424916 - 3424928 + g 80 -4.8 -5.03715 | overlap 3424926 GTACTGCCCCAGCAT CAGC AGGTC GCTG TTTTTTAGCAGTAAT mreB 3426299 - 3425256 - | rod shape-determining protein yhdA 3428547 - 3426607 - | putative lipoprotein TERM 4484 3426773 - 3426750 - G 74 -10.2 -3.53012 | CGCCCGTCGCGTAAA CCTGCGTAGG CGTA CCCGCGCAGG CCTCTACCAGACTTT TERM 4485 3426792 - 3426802 + g 74 -6.8 -4.29845 | CTACCAGACTTTGAA CCAG AAG CTGG TTTTCCGTTCGCTTC TERM 4486 3429121 - 3429133 + G 70 -6.9 -4.08945 | overlap 3429122 3429128 GTAACGCCATGATCA TCGGC ACC GCCGG TTTTACCGCCATGCT yhdH 3428751 - 3429725 + | possible oxidoreductase TERM 4487 3429877 - 3429887 + G 87 -2.4 -5.60993 | GAAGCCGATGTGACT GCGG AAT CGGC TTTTTTTATGCAGCG TERM 4488 3430139 - 3430129 - g 71 -8.2 -3.85698 | overlap 3430130 TTTGGCCTTGATAAA GCCG ACC CGGC GGCCAATGCCGGAAG SEN3211 3429838 - 3430842 + | hypothetical protein SEN3212 3430843 - 3431442 + | hypothetical protein accB 3431835 - 3432305 + | biotin carboxyl carrier protein TERM 4489 3432671 - 3432634 - g 74 -10.6 -3.53811 | gap 1 TTTATCGGCCCGAAA GCGGACACCAT-CCGCC TGATG GGCGATAAAGTGTCCGC GATTACCGCGATGAA TERM 4490 3432727 - 3432691 - g 85 -4.4 -5.14965 | overlap 3432692 ACCGCGATGAAAAAA GCGGGC-GTGCCGACCGT ACC AGGATCTG-ACGGCCCGC TGGGCGACGATATGA TERM 4491 3432816 - 3432793 - g 73 -9.4 -3.78775 | opp_overlap 3432813 3432814 CCGGTGATCATCAAA GCGTCCGGCG GCGG CGGCGGCCGC GGTATGCGCGTGGTT accC 3432316 - 3433665 + | biotin carboxylase TERM 4492 3433701 - 3433685 - f 87 -10.8 -4.19506 | opp_overlap 3433685 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG TERM 4493 3433685 - 3433701 + F 100 -10.8 -5.72622 | opp_overlap 3433685 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG yhdT 3433774 - 3434016 + | hypothetical protein TERM 4494 3434085 - 3434097 + G 76 -3.3 -5.0133 | overlap 3434079 ACGCTATGCGCAAGC GTACC GCC GGCAC TTTTTTAAACGAATA TERM 4495 3434829 - 3434849 + G 73 -6.1 -4.4261 | ACCGGGGCATTATTA TCGGTACGA TTG TCGTGGCGA TTTTAATGTTCGGGA panF 3434006 - 3435457 + | sodium/pantothenate symporter (pantothenate permease) TERM 4496 3435531 - 3435561 + G 77 -11.2 -3.57144 | opp_overlap 3435541, overlap 3435536 AGAGCTGAGTGATGC GCTGATGGAAGCGG GCG CCGTTTCCATTACC TTTCAGGATACGCAC TERM 4497 3435536 - 3435556 + G 78 -11.9 -3.28001 | opp_overlap 3435541, overlap 3435531 TGAGTGATGCGCTGA TGGAAGCGG GCG CCGTTTCCA TTACCTTTCAGGATA prmA 3435469 - 3436350 + | ribosomal protein L11 methyltransferase TERM 4498 3436360 - 3436379 + F 91 -11.4 -4.36914 | AAATAATTCTTGTCA GCGTGGTC GCCC GGCCACGC TTTTCTCCACACAAC TERM 4499 3436654 - 3436641 - f 84 -8.1 -4.70583 | TTCATGAACACAAAA GCGCA TCTG TGCGC CCCCTTCCGACTGGC TERM 4500 3436696 - 3436682 - f 80 -5.6 -4.91712 | GGCAATGGAGAAAAA TCACGC GCA GCGGGA AGTGATCTTGTCCTG TERM 4501 3436774 - 3436761 - f 86 -4.5 -5.626 | opp_overlap 3436737 3436761, overlap 3436748 TAGCTTATAAAAAAA GCAGA TTAT TCCGC TTATCTTGTTTCTGG TERM 4502 3436976 - 3436962 - f 76 -4.2 -5.00884 | overlap 3436963 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG TERM 4503 3437881 - 3437856 - g 70 -9.8 -3.34894 | gap 1, overlap 3437854 AATCGCGCGTAAACA CGT-CTCCTGG TATCT CCAGGAGCACG CTCCAGACGACCAGT yhdG 3437011 - 3437976 + | hypothetical protein fis 3438002 - 3438298 + | Fis DNA-binding protein TERM 4504 3438328 - 3438353 + F 100 -8.2 -5.252 | opp_overlap 3438328 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATC TERM 4505 3438353 - 3438328 - f 74 -6 -4.56597 | opp_overlap 3438328 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATC TERM 4506 3438552 - 3438562 + G 75 -6.8 -4.40358 | ATGGTGGAGTCCTGG GACG AAG CGTC TTTTCTGGCCTGGCT yhdJ 3438384 - 3439268 + | putative adenine-specific DNA-modification methylase yhdU 3439351 - 3439515 + | hypothetical protein TERM 4507 3441112 - 3441145 + G 84 -12.5 -3.43492 | GGCGTACTGAATCCT GACCAGTTTTTACCG CTGG CGGAAAAAACGGGTC TTATCGTCACTATCG SEN3222 3439666 - 3441765 + | hypothetical protein envR 3442430 - 3441768 - | TetR-family transcriptional regulator TERM 4508 3443090 - 3443080 - g 73 -5.4 -4.64861 | CGTGCTTAAAAGAAA CTTC ACC GAAG GTAGCGATGTAGAGG acrE 3442844 - 3444001 + | acriflavine resistance protein E (protein envc) TERM 4509 3444952 - 3444982 + G 70 -6.8 -4.1021 | overlap 3444942 3444955 AAACTGGCGGAGCTG CAGCCTTTCTTCCC CCA GGGAATGAAGGTGG TTTATCCTTATGACA acrF 3444013 - 3447126 + | acriflavin resistance protein F TERM 4510 3447154 - 3447139 - f 74 -10.4 -3.25918 | opp_overlap 3447139, overlap 3447137 3447135 TAACCGGTAAACAGA GGCGTC TTCG GACGCC TTTTTAAACGGTACG TERM 4511 3447139 - 3447154 + F 93 -10.4 -4.58395 | opp_overlap 3447139 3447137 3447135 TAACCGGTAAACAGA GGCGTC TTCG GACGCC TTTTTAAACGGTACG yhdV 3447364 - 3447585 + | possible lipoprotein TERM 4512 3447616 - 3447590 - f 80 -12.2 -3.05769 | opp_overlap 3447595, overlap 3447583 TTTCTAAATGATACA TGCAGGCGCGGC AAT GCCGCGCTTTCA GTAATAATATAAAGG TERM 4513 3447595 - 3447611 + F 100 -15.1 -3.6959 | opp_overlap 3447590 3447583 AAATGATACATGCAG GCGCGGC AAT GCCGCGC TTTCAGTAATAATAT TERM 4514 3447943 - 3447929 - f 71 -3.5 -4.88405 | AACTGGCAAATAAAA TAGCC TAATG GGCCA GATTTTTAGTCCTCA TERM 4515 3448190 - 3448156 - f 70 -10.1 -3.10967 | gap 1, opp_overlap 3448156 3448163, overlap 3448163 CATAGAGAGATAAAT GCAAAAAGGCCCAGTC TTTC GATTGGGCC-CTTTGC TTTATTTGATGTCTG TERM 4516 3448156 - 3448190 + F 90 -10.1 -4.55209 | gap 1, opp_overlap 3448156 3448163, overlap 3448163 CATAGAGAGATAAAT GCAAAAAGGCCCAGTC TTTC GATTGGGCCC-TTTGC TTTATTTGATGTCTG TERM 4517 3448184 - 3448163 - f 100 -10.1 -4.85433 | opp_overlap 3448156 3448163, overlap 3448156 AGATAAATGCAAAAA GGCCCAGTC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4518 3448163 - 3448184 + F 81 -12.3 -3.15242 | opp_overlap 3448163 3448156, overlap 3448156 AGATAAATGCAAAAA GGCCCAGTC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4519 3448266 - 3448280 + F 71 -7.8 -3.99324 | opp_overlap 3448266 TGCGCAACGTTCAAA TCCGCT CCC GGCGGA TTTGTCCTCCTCAGG TERM 4520 3448366 - 3448317 - f 100 -23.3 -4.09117 | opp_overlap 3448321 3448326 3448331, overlap 3448326 3448331 CTCACCGACAAACAA CAGATAAAACAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGTTTTATTTG ATGTCTGGCAGTTCC TERM 4521 3448321 - 3448362 + F 100 -20.5 -3.88498 | opp_overlap 3448317 3448326 3448331, overlap 3448326 3448331 CCGACAAACAACAGA TAAAACAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGTTTTA TTTGATGTCTGGCAG TERM 4522 3448357 - 3448326 - f 100 -18.2 -4.74989 | opp_overlap 3448321 3448326 3448331, overlap 3448317 3448331 AAACAACAGATAAAA CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG TTTTATTTGATGTCT TERM 4523 3448326 - 3448357 + F 100 -16 -4.98061 | opp_overlap 3448326 3448317 3448331, overlap 3448321 3448331 AAACAACAGATAAAA CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG TTTTATTTGATGTCT TERM 4524 3448331 - 3448352 + F 100 -10.1 -5.34857 | opp_overlap 3448331 3448326 3448317, overlap 3448326 3448321 ACAGATAAAACAAAA GGCCCAGTC TTTC GACTGAGCC TTTTGTTTTATTTGA TERM 4525 3448352 - 3448331 - f 100 -12.3 -5.24647 | opp_overlap 3448326 3448321 3448331, overlap 3448326 3448317 ACAGATAAAACAAAA GGCCCAGTC TTTC GACTGAGCC TTTTGTTTTATTTGA TERM 4526 3451234 - 3451246 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4527 3451788 - 3451812 + F 71 -8 -3.93061 | gap 1, opp_overlap 3451786 3451794, overlap 3451790 3451791 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4528 3451887 - 3451852 - f 77 -9.2 -4.00532 | opp_overlap 3451863 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA CTGATGGCAACGCCT TERM 4529 3452014 - 3452027 + F 85 -6.7 -5.1166 | ACTGAAGTCTCAATC GCAAG ACGC CTTGC TTTTTACTTTTCATC TERM 4530 3453804 - 3453816 + F 71 -7.7 -4.00532 | overlap 3453785 CACCGTTGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4531 3453836 - 3453850 + F 76 -4.2 -5.0916 | opp_overlap 3453836, overlap 3453825 3453837 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTCTCTTCAACC yrdA 3454098 - 3454652 + | putative transferase yrdB 3454885 - 3454628 - | hypothetical protein aroE 3455700 - 3454882 - | shikimate dehydrogenase yrdC 3456277 - 3455705 - | hypothetical protein yrdD 3456824 - 3456282 - | hypothetical protein TERM 4532 3456332 - 3456346 + g 76 -3.4 -5.10933 | opp_overlap 3456327, overlap 3456333 TGGCGCAAAAGCGCT TCACGC CCT GCGCGG TTTTCTTTTCGATGA TERM 4533 3456763 - 3456789 + g 71 -4.2 -4.56597 | overlap 3456766 3456778 GAGCGAATTACCAGT TCGGCCCCGCAC TGC GGGCAGGGCTCA TTTTTACGCACCGAA smg 3457324 - 3456851 - | hypothetical protein smf 3458420 - 3457296 - | hypothetical protein def 3458552 - 3459061 + | polypeptide deformylase TERM 4534 3459123 - 3459145 + G 95 -14.9 -3.23452 | overlap 3459118 GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTAACTTCTGGACAT TERM 4535 3459308 - 3459298 - g 74 -6.8 -4.25104 | opp_overlap 3459298 3459301, overlap 3459299 TCGTCCTCAGGAAAA CCAG CAA CTGG TTGCTGACTTACATG fmt 3459077 - 3460024 + | methionyl-tRNA formyltransferase TERM 4536 3460041 - 3460059 + F 100 -10.2 -5.54907 | opp_overlap 3460042, overlap 3460042 GGTCACGTCTTTATA AGCCCGGT GTT ACCGGGCA TTTTTATTTTATACA TERM 4537 3460058 - 3460042 - f 86 -13.7 -3.29511 | opp_overlap 3460041 3460042 GTCACGTCTTTATAA GCCCGGT GTT ACCGGGC ATTTTTATTTTATAC TERM 4538 3460042 - 3460058 + F 100 -13.7 -3.91317 | opp_overlap 3460042, overlap 3460041 GTCACGTCTTTATAA GCCCGGT GTT ACCGGGC ATTTTTATTTTATAC TERM 4539 3460776 - 3460793 + G 80 -5.5 -4.88736 | CTGTCCAGGATGCCT CTGCGCA GGGA TGTGCGG TTTTTCTCGCTCCTC sun 3460076 - 3461365 + | sun protein TERM 4540 3462609 - 3462596 - g 72 -2.3 -4.9448 | overlap 3462597 ATTGACGAAATAAAA CTGCC GCCA GGCAC CATTATTGGCGCGGT trkA 3461387 - 3462763 + | potassium transport protein TERM 4541 3462770 - 3462788 + TF 100 -11.7 -4.90917 | opp_overlap 3462769 TTCCTCTAATTTAAG GGGCGCT CATTC AGCGCCC TTTTTAATTCCCTTT TERM 4542 3463257 - 3463223 - gT 74 -2.1 -5.09426 | gap 1, opp_overlap 3463229 3463234 3463247, overlap 3463229 3463231 CTCAACCGTAAAAAA GCAGAAGA-GCCGGCA GCTC CGCCAGCGCCTTCTAA AGAGGAAGTGCTATT SEN3239 3463523 - 3463254 - | hypothetical protein mscL 3462905 - 3463318 + | large-conductance mechanosensitive channel TERM 4543 3463374 - 3463322 - GT 93 -13.6 -3.61894 | opp_overlap 3463323, overlap 3463325 3463328 AACCGTTCTTAATAA GCAGAAGGCCAGTGGTAAAAAAGT TACTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG TERM 4544 3463323 - 3463374 + gT 73 -10.3 -3.09933 | gap 1, opp_overlap 3463322 3463325 3463328 ACCGTTCTTAATAAG CAG-AAGGCCAGTGGTAAAAAAGT TACTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG TERM 4545 3463371 - 3463325 - GT 100 -19.7 -2.93073 | opp_overlap 3463323, overlap 3463322 3463328 CGTTCTTAATAAGCA GAAGGCCAGTGGTAAAAAAGT TACTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCTCGATTA TERM 4546 3463368 - 3463328 - GT 100 -17.8 -3.61089 | opp_overlap 3463323, overlap 3463325 3463322 TCTTAATAAGCAGAA GGCCAGTGGTAAAAAAGT TACTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCTCGA zntR 3464006 - 3463581 - | putative Zn(II)-responsive regulator yhdN 3464385 - 3464017 - | hypothetical protein TERM 4547 3464449 - 3464482 + r 79 -11.9 -3.16921 | opp_overlap 3464451 3464459, overlap 3464459 TGGGGTTCAGGAGGA TATAAAAAAACCCGC CGAA GCGGGTTTTTTTACG TTACTACAGATTACT TERM 4548 3464480 - 3464451 - R 100 -16.7 -2.82516 | opp_overlap 3464449 3464459, overlap 3464459 GGGTTCAGGAGGATA TAAAAAAACCCGC CGAA GCGGGTTTTTTTA CGTTACTACAGATTA TERM 4549 3464459 - 3464472 + r 100 -9.5 -5.54192 | opp_overlap 3464451 3464459, overlap 3464449 GAGGATATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT TERM 4550 3464472 - 3464459 - R 100 -9.5 -5.74122 | opp_overlap 3464459 3464449, overlap 3464451 GAGGATATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT rplQ 3464876 - 3464493 - | 50S ribosomal subunit protein L17 rpoA 3465906 - 3464917 - | DNA-directed RNA polymerase alpha chain TERM 4551 3465000 - 3465012 + g 76 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC GGTAA GAGA TTTTTTACCCAGGTT TERM 4552 3465947 - 3465929 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3466552 - 3465932 - | 30S ribosomal subunit protein S4 TERM 4553 3466042 - 3466052 + g 70 -6.8 -4.12188 | overlap 3466039 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4554 3466579 - 3466597 + r 76 -4.4 -5.00616 | opp_overlap 3466579 3466583 AACTAACCTGGAAAA CGAAGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3466918 - 3466586 - | 30S ribosomal subunit protein S11 rpsM 3467348 - 3466992 - | 30S ribosomal subunit protein S13 TERM 4555 3467173 - 3467191 + g 85 -8.8 -4.44667 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTTCTTCAGACA TERM 4556 3467465 - 3467436 - R 100 -12.3 -4.6645 | gap 1 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 3467611 - 3467495 - | 50S ribosomal subunit protein L36 secY 3468974 - 3467643 - | preprotein translocase subunit TERM 4557 3468541 - 3468510 - G 80 -10.2 -3.81755 | overlap 3468516 AGCGGTGAAATAGAA TGCAAAGCCTGG ATTCATCA CCAGGCCCTGCA TACCAGGCATATTCG rplO 3469416 - 3468982 - | 50S ribosomal subunit protein L15 TERM 4558 3469362 - 3469375 + g 73 -5.2 -4.59853 | opp_overlap 3469355, overlap 3469355 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3469599 - 3469420 - | 50S ribosomal subunit protein L30 rpsE 3470106 - 3469603 - | 30S ribosomal subunit protein S5 rplR 3470474 - 3470121 - | 50S ribosomal subunit protein L18 rplF 3471017 - 3470484 - | 50S ribosomal subunit protein L6 rpsH 3471422 - 3471030 - | 30S ribosomal subunit protein S8 rpsN 3471746 - 3471456 - | 30S ribosomal subunit protein S14 rplE 3472315 - 3471776 - | 50S ribosomal subunit protein L5 TERM 4559 3472153 - 3472171 + g 71 -6 -4.30987 | TTGCTGTCAGGTCTG CTGCTG CGTTATC CAGCAG TTTCTTGTCAGCGAT rplX 3472644 - 3472330 - | 50S ribosomal subunit protein L24 rplN 3473026 - 3472655 - | 50S ribosomal subunit protein L14 TERM 4560 3473098 - 3473086 - R 81 -3.3 -5.40474 | AGGTCGTTAAAAAAA CCCCA TAT CGAGG GCGCGGCATTATAAC TERM 4561 3473142 - 3473167 + r 77 -10.5 -3.34895 | opp_overlap 3473142, overlap 3473146 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4562 3473167 - 3473142 - R 100 -12.7 -5.252 | opp_overlap 3473142 3473146 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4563 3473146 - 3473163 + r 74 -6.9 -4.3255 | opp_overlap 3473142, overlap 3473142 GGTAGAAAAAATAAA CGGCCCA TCGC TGAGCCG TTTATTCGTTGAGAA rpsQ 3473444 - 3473190 - | 30S ribosomal subunit protein S17 rpmC 3473635 - 3473444 - | 50S ribosomal subunit protein L29 rplP 3474045 - 3473635 - | 50S ribosomal subunit protein L16 rpsC 3474759 - 3474058 - | 30S ribosomal subunit protein S3 TERM 4564 3474087 - 3474102 + g 70 -3.2 -4.70626 | overlap 3474088 3474099 TACGCTGCTGCTTTT TCGGTT GAGC AGCCGG TTTTTCCGGTTGTTC rplV 3475109 - 3474777 - | 50s ribosomal protein l22 rpsS 3475402 - 3475124 - | 30S ribosomal subunit protein S19 rplB 3476240 - 3475419 - | 50S ribosomal subunit protein L2 TERM 4565 3476276 - 3476296 + r 75 -9.7 -3.57462 | opp_overlap 3476279, overlap 3476279 CTCAGCGCCACCGAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3476560 - 3476258 - | 50S ribosomal subunit protein L23 rplD 3477162 - 3476557 - | 50S ribosomal subunit protein L4 TERM 4566 3477130 - 3477142 + g 73 -10.5 -3.42663 | opp_overlap 3477125, overlap 3477129 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3477802 - 3477173 - | 50S ribosomal subunit protein L3 TERM 4567 3477764 - 3477778 + g 82 -5.6 -5.02074 | opp_overlap 3477745 3477763, overlap 3477766 ATCTTCAGTGAAGAT GCGGGT CAT ACCCAC TTTTTTACCGACTAA rpsJ 3478146 - 3477835 - | 30S ribosomal subunit protein S10 TERM 4568 3478599 - 3478618 + G 70 -9.2 -3.72588 | TATACGACGCGCGTA CCGGTCTG CTGC CTGACCGG TTTACCTGTCCATTA hopD 3478526 - 3478993 + | Type III leader peptidase bfr 3479466 - 3478990 - | bacterioferritin TERM 4569 3479540 - 3479530 - R 89 -5.4 -5.78622 | GGATGTCAAAAAAAA GAGT GTG ACTC AGGCGATCTCTTTAA bfd 3479733 - 3479539 - | bacterioferritin-associated ferredoxin TERM 4570 3479873 - 3479888 + r 79 -11.8 -3.14878 | opp_overlap 3479873, overlap 3479871 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC TERM 4571 3479888 - 3479873 - R 100 -11.8 -5.11063 | opp_overlap 3479871 3479873 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC SEN3273 3481102 - 3479918 - | elongation factor Tu TERM 4572 3481147 - 3481122 - R 82 -13.3 -2.78935 | opp_overlap 3481120 ATATTCCTTACTATA GCGCTCTCCCC TTCA GGAGAGAGCAC GGGATTTTGGTTTTT fusA 3483288 - 3481174 - | elongation factor G TERM 4573 3483359 - 3483336 - R 83 -8.9 -4.21275 | gap 1 TTAAGTTATCCAAAA CGGGCGACTT ACCTG AAG-CGCCCG CCTGGTGACTATGAC rpsG 3483855 - 3483385 - | 30S ribosomal subunit protein S7 rpsL 3484325 - 3483951 - | 30S ribosomal subunit protein S12 TERM 4574 3484395 - 3484373 - R 93 -10.6 -4.7268 | AAACACGTAATAAAA CGCCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG yheL 3484738 - 3484451 - | hypothetical protein yheM 3485102 - 3484746 - | hypothetical protein TERM 4575 3484931 - 3484946 + g 75 -4 -4.84359 | gap 1 CAATATAGTCACGCG CCAGCAC AGC GT-CTGG TTTTTGTCCCGGTAA TERM 4576 3485022 - 3484992 - G 100 -9.8 -5.24129 | gap 1, opp_overlap 3484993 GTCGCTGATAAAAAA GACGCCCAGCGCT TCCGTT AGCGCT-GACGTC GCCAGCAGCGCATCC yheN 3485488 - 3485102 - | hypothetical protein yheO 3486210 - 3485488 - | hypothetical protein TERM 4577 3486005 - 3486036 + g 70 -6.7 -4.21194 | gap 1 ATTTTACGGCCCGTA TGTTC-GCCATTGG CAATA CGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4578 3486235 - 3486222 - R 78 -6.7 -4.59226 | opp_overlap 3486232 3486233 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTATGTTT TERM 4579 3486475 - 3486454 - R 100 -13 -5.7946 | opp_overlap 3486451 GCCTGAATAAAAAAA CCGCCGCT ATTACA AGCGGCGG CTCTCAGTTTTTATT fkpA 3487304 - 3486486 - | FKBP-type peptidyl-prolyl isomerase TERM 4580 3486612 - 3486622 + g 77 -8.2 -4.13767 | GTTCGCCGGGATACC CGGG ACG CCCG TTTTACCGTAGGCCA slyX 3487524 - 3487742 + | hypothetical protein TERM 4581 3487769 - 3487755 - T 100 -8.5 -5.90981 | opp_overlap 3487755 TGAGACGAAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4582 3487755 - 3487769 + T 100 -8.5 -5.60993 | opp_overlap 3487755 TGAGACGAAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4583 3487853 - 3487884 + T 79 -10.8 -3.54424 | opp_overlap 3487852 GCAAGCTTGAAAATT CCCCGGGAGCATAG ATAA CTATGTGACCGGGG TTTGAAAGCGTAGCC slyD 3488521 - 3487931 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4584 3488495 - 3488506 + g 73 -5.8 -4.39989 | overlap 3488479 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT yheV 3488816 - 3488616 - | hypothetical protein kefB 3490631 - 3488826 - | glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter) TERM 4585 3489414 - 3489403 - G 77 -7.2 -4.2717 | ATCACCTGACCAAAA CGGC CAAA GCCG ACGACAATTACCTGG yheR 3491182 - 3490631 - | putative oxidoreductase TERM 4586 3492975 - 3492959 - g 80 -5.1 -4.91109 | overlap 3492960 GGTTCACGACAAAAA GGTCGAA CCG TTCGACG GAGACCTGGAAGATT yheS 3491448 - 3493355 + | probable ABC transporter ATP-binding protein TERM 4587 3493742 - 3493762 + T 78 -6.1 -4.72007 | overlap 3493745 CTGCGTTATGTGATT TAGCGGCAA AGG TTGCCGTGA TTTATTTTCGTCAGC TERM 4588 3493745 - 3493759 + T 71 -10 -3.27205 | overlap 3493742 CGTTATGTGATTTAG CGGCAA AGG TTGCCG TGATTTATTTTCGTC SEN3288 3494052 - 3493741 - | hypothetical protein TERM 4589 3493898 - 3493909 + g 83 -5.8 -4.95896 | AACAAGTAAATGCCG CCAG CTTG CTGG TTTTTCTCGCTTTCT yheT 3494250 - 3495317 + | hypothetical protein yheU 3495314 - 3495532 + | hypothetical protein prkB 3495583 - 3496452 + | phosphoribulokinase yhfA 3496952 - 3496548 - | hypothetical protein TERM 4590 3497025 - 3497008 - H 73 -4.1 -4.84311 | GCGCATACAACAAAA GTCGC AATGGAAG GCGAC CTGGGTCATGCTGAA crp 3497260 - 3497892 + | cyclic AMP receptor protein,catabolite gene activator TERM 4591 3497904 - 3497925 + F 95 -8 -5.30616 | opp_overlap 3497904, overlap 3497896 TTAATTCCGTCAGAA TGGCGCGT TTTATC ATGCGCCA TTTTTGTTTGCATCG TERM 4592 3498620 - 3498632 + G 70 -6.9 -4.07687 | ATAATGATTACAAGC GCCTG TTA CGGGC TTTTCAGGAAGCGAT TERM 4593 3498729 - 3498787 + G 88 -11.6 -4.12254 | opp_overlap 3498729 3498752, overlap 3498730 3498770 CAGCCATGCGGAAGA GGTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGACA TTCTTTATCATCGTC TERM 4594 3498730 - 3498786 + G 91 -15.1 -3.0663 | opp_overlap 3498729 3498752, overlap 3498729 3498770 AGCCATGCGGAAGAG GTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGAC ATTCTTTATCATCGT TERM 4595 3498861 - 3498829 - g 78 -7 -4.65895 | overlap 3498831 TTCTCCATGGAAAAA CAGATTGGCGCTCT GGAGA AAATCGCCAATCAG CATCCTGAAAATCCG TERM 4596 3498859 - 3498831 - g 74 -8.2 -3.94812 | overlap 3498829 CTCCATGGAAAAACA GATTGGCGCTCT GGAGA AAATCGCCAATC AGCATCCTGAAAATC TERM 4597 3499043 - 3499024 - g 71 -11.4 -2.90615 | overlap 3499021 3499038 ATGTCTCTTAAATCA CCGGCGCT ACGC AACGCCGG ACGCATCAGCGTGAT yhfK 3497941 - 3500028 + | hypothetical protein TERM 4598 3500074 - 3500024 - T 74 -3.8 -4.9792 | overlap 3500025 3500029 TACGGGATACAAAAA GTTAAGACCGACTGCCGGATGCGC TAC GCTTATCCGGCAATCTGCCATCAG GCAACCACCTTCCCT TERM 4599 3500069 - 3500029 - T 88 -12.5 -3.50684 | overlap 3500025 3500024 GATACAAAAAGTTAA GACCGACTGCCGGATGCGC TAC GCTTATCCGGCAATCTGCC ATCAGGCAACCACCT argD 3501288 - 3500071 - | acetylornithine aminotransferase pabA 3501937 - 3501374 - | para-aminobenzoate synthase, glutamine amidotransferase component II TERM 4600 3501702 - 3501675 - G 72 -12 -2.73243 | overlap 3501674 ACCGACGCGCCAAAG GCCTGCGCCATC GCCT GATGACCCAGGC AAACGCCCAGCATCG TERM 4601 3501750 - 3501735 - G 71 -10.4 -3.29263 | overlap 3501723 ATACGTCCGGCATAA TGGCGG ATGA CCGCCA GTGAAATGCCAGCGT fic 3502571 - 3501969 - | cell filamentation protein Fic TERM 4602 3502436 - 3502456 + g 73 -8.9 -3.8377 | GCCCCAGTTCAATCG TGGCGGCGC GGA GCGCGGTCA TTTCGTATGCCGCTT yhfG 3502728 - 3502561 - | hypothetical protein TERM 4603 3502826 - 3502806 - R 100 -15.4 -4.46155 | opp_overlap 3502814 GAGACAGGGAGAAAA CGCGGGCG GCTCG CGCCCGCG CAGGCATGTTTTATG ppiA 3503409 - 3502837 - | peptidyl-prolyl cis-trans isomerase TERM 4604 3503390 - 3503376 - G 77 -7.8 -4.33907 | opp_overlap 3503389 CAGAAAGAGCGAAAA CAGCTG CGA CAGCCG CCAGAGTCGATTTGA yhfC 3503686 - 3504867 + | hypothetical protein TERM 4605 3504874 - 3504903 + F 82 -13.5 -2.8805 | opp_overlap 3504872 3504871 ACGCATTGATAATCC TTGCCGGATGGCG ACAT CGCCCTCCGGCAC TCTATCCCCCCTCCT TERM 4606 3506440 - 3506426 - g 74 -10 -3.74693 | TTCGATGTGACTAAA GGCGAT CTG ATCGCC GCTATCAATAAAGGC TERM 4607 3506503 - 3506492 - g 74 -7.2 -4.08919 | overlap 3506487 AAAGCGGAAACCAAA GCCG GAAC CGGC TGCGGCGGCTGCATC nirB 3505130 - 3507673 + | nitrite reductase large subunit nirD 3507670 - 3507996 + | nitrite reductase (NAD(P)H) small subunit TERM 4608 3508004 - 3508024 + F 100 -12.5 -5.72118 | overlap 3508005 GCGGTTAATTATTTT TGGGAGGCG CAA CGCCTCCCC TTTTTTGTATTTTTT TERM 4609 3508005 - 3508023 + F 100 -16 -3.9778 | overlap 3508004 CGGTTAATTATTTTT GGGAGGCG CAA CGCCTCCC CTTTTTTGTATTTTT TERM 4610 3508132 - 3508099 - f 72 -8.1 -3.794 | overlap 3508100 CGGCAACTGAGCAAA TCCCCAGGAACATAG TTCA CTATGTGACTGGGGT GAGCGAGGGCAGCCA TERM 4611 3508131 - 3508100 - f 77 -11.6 -2.87319 | overlap 3508099 GGCAACTGAGCAAAT CCCCAGGAACATAG TTCA CTATGTGACTGGGG TGAGCGAGGGCAGCC nirC 3508192 - 3509001 + | putative nitrite transporter cysG 3509013 - 3510386 + | siroheme synthase TERM 4612 3510423 - 3510387 - f 71 -9.6 -3.27298 | opp_overlap 3510397, overlap 3510388 3510393 TTCTCTAATTATTAA TTAAAATAACGCCCTG AATAA CAGGGCTTTATTTTAC AACTACTCGTAATCT TERM 4613 3510422 - 3510388 - f 80 -13.1 -2.56164 | opp_overlap 3510397, overlap 3510387 3510393 TCTCTAATTATTAAT TAAAATAACGCCCTG AATAA CAGGGCTTTATTTTA CAACTACTCGTAATC TERM 4614 3510417 - 3510393 - f 81 -8.6 -4.47217 | opp_overlap 3510397, overlap 3510388 3510387 AATTATTAATTAAAA TAACGCCCTG AATAA CAGGGCTTTA TTTTACAACTACTCG TERM 4615 3510397 - 3510413 + F 89 -9.4 -4.65933 | opp_overlap 3510393 3510388 3510387 ATTAATTAAAATAAC GCCCTG AATAA CAGGGC TTTATTTTACAACTA bigA 3510715 - 3516495 + | putative surface-exposed virulence protein BigA TERM 4616 3516524 - 3516545 + F 84 -8.7 -4.69664 | opp_overlap 3516524 TATAACACTAATAAA GGCCGCTTA TTAT TAATCGGCC TTTTTAAATCATATC TERM 4617 3516545 - 3516524 - f 79 -8.7 -4.34759 | opp_overlap 3516524 TATAACACTAATAAA GGCCGCTTA TTAT TAATCGGCC TTTTTAAATCATATC yhfL 3516688 - 3516858 + | hypothetical protein TERM 4618 3516901 - 3516887 - T 100 -11.4 -5.76633 | opp_overlap 3516887 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT TERM 4619 3516887 - 3516901 + T 100 -11.4 -5.42862 | opp_overlap 3516887 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT trpS 3518007 - 3517003 - | tryptophanyl-tRNA synthetase gph 3518758 - 3518000 - | phosphoglycolate phosphatase rpe 3519428 - 3518751 - | ribulose-phosphate 3-epimerase TERM 4620 3519433 - 3519445 + r 75 -6.3 -4.43307 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTCTTGCAGG dam 3520282 - 3519446 - | DNA adenine methylase TERM 4621 3519808 - 3519820 + g 74 -3.3 -4.83615 | opp_overlap 3519806 3519809, overlap 3519809 ACTCACAGTAAAAGA ACGCA TTC TGCGC TTTTTCTGCAAAGTG TERM 4622 3519819 - 3519809 - G 74 -6.8 -4.29302 | opp_overlap 3519809 3519808, overlap 3519806 CTCACAGTAAAAGAA CGCA TTC TGCG CTTTTTCTGCAAAGT TERM 4623 3520166 - 3520145 - G 83 -7.3 -4.60073 | overlap 3520146 3520160 GATATAACGAGAAAA GTCGGTGTT AAGA AACACCGAT CCGGCACCCACAAAA TERM 4624 3520165 - 3520146 - G 73 -10.8 -3.34959 | overlap 3520145 3520160 ATATAACGAGAAAAG TCGGTGTT AAGA AACACCGA TCCGGCACCCACAAA damX 3521740 - 3520463 - | DamX protein TERM 4625 3520924 - 3520954 + g 71 -6.1 -4.25681 | gap 1 CCGGTTTCTTCGGTT CCGCAG-TCGTGGT TTTC GCCGTGGTCTGCGG TTTCTTAGGTTCAAT TERM 4626 3521463 - 3521479 + g 74 -2.2 -5.09426 | gap 1, overlap 3521465 3521466 ATGTATTGACGAGAG GCTGGCT TATG GGCC-GC TTTTTTACGCTTACG aroB 3522926 - 3521838 - | 3-dehydroquinate synthase TERM 4627 3522872 - 3522850 - G 85 -12.8 -3.53712 | overlap 3522846 3522868 AGCGGCAAGAATGAA GCTGGTTCGT TAA ACAAACCAGC CGCGATGGTGATCGG aroK 3523504 - 3522983 - | shikimate kinase I hofQ 3525207 - 3523969 - | type II secretion system protein TERM 4628 3524135 - 3524121 - GR 74 -2 -5.00616 | opp_overlap 3524134, overlap 3524123 TTTTTCGCGAAAAAA TACCGC CCA GCGCCA GCGTCTCGCCGCTTT yrfA 3525523 - 3525122 - | hypothetical protein yrfB 3525986 - 3525513 - | hypothetical protein yrfC 3526509 - 3525970 - | hypothetical protein TERM 4629 3526409 - 3526383 - G 76 -2.8 -5.00616 | opp_overlap 3526387, overlap 3526387 CCTCCTGCCAAAAAA CCAACCGGGCGA TCG TCGCGAGGCTTG CTATCAGCAGCAGGG yrfD 3527288 - 3526509 - | hypothetical protein TERM 4630 3526595 - 3526551 - G 70 -9.4 -3.66654 | gap 2, overlap 3526555 CAGCGCAATCGCAAA GCGATAACCGTCCGGCGGAACC GGC GGTT--GGCGGACGGTTACGGC GCGCCAGGGGTCGAA TERM 4631 3526826 - 3526791 - G 71 -10.5 -3.21194 | gap 1, overlap 3526792 TATAAACGGCAGCAA GC-GCTGTAACGCGCA GGCAT CGGGCGTTACAGCAGC GATGCGCACATTGAG TERM 4632 3528798 - 3528770 - g 70 -9.5 -3.32159 | TCAGAGTAAATTTAA CCGCGCGACGCAA GCT TTGCGTCAGGTGG GGTCGAACATCAAAC TERM 4633 3529424 - 3529403 - g 83 -10.1 -4.07568 | GCTGGTCGCGCAAAA CGGCACGCA GGAG TACGCGCCG CATGTGATCAATACG TERM 4634 3529438 - 3529448 + G 74 -8.2 -4.05446 | opp_overlap 3529436 3529438 CGCATGTGATCAATA CGCC GCT GGCG TTTCTGATTAAAAGC mrcA 3527385 - 3529961 + | penicillin-binding protein 1A TERM 4635 3529963 - 3529990 + T 86 -11.4 -3.81755 | opp_overlap 3529970, overlap 3529970 ACGAACTGTTCTGAT CAAAAAAGGCGC TCCG GCGCCTTTTTTA TTGTGTTTAGCGGAT TERM 4636 3529970 - 3529983 + T 100 -9.5 -5.66338 | opp_overlap 3529970, overlap 3529963 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT TERM 4637 3529983 - 3529970 - T 100 -9.5 -5.14563 | opp_overlap 3529970 3529963 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT yrfE 3530620 - 3530057 - | putative NUDIX hydrolase TERM 4638 3530676 - 3530693 + H 90 -9.9 -4.54343 | opp_overlap 3530665 CATACCGCACGGTTT CGGCAAT GCGA ATTGCCG TTTATTTACATTTAT TERM 4639 3531597 - 3531615 + G 72 -2.4 -4.85599 | overlap 3531598 TTGTTATTCTTTTTC TGTCTG ATAACGC CAGACG TTTTTGTACCGTGGA yrfF 3530943 - 3533075 + | hypothetical protein TERM 4640 3533396 - 3533416 + G 77 -8.1 -4.07885 | TTTGCGCCATGACGA CGGCGCAAG GGC CGCGCGCCG TTTTGCGCGACGATA yrfG 3533140 - 3533808 + | putative hydrolase TERM 4641 3533845 - 3533830 - g 77 -4.6 -4.93877 | overlap 3533832 CGCCATGAAAGAAAA GTCCTC CGTT GAGGTC AGACTGGATAAATGG TERM 4642 3533905 - 3533886 - g 74 -7 -4.36914 | CGCGTTTTTATAAAA CCCGCGCG CTGG CCCGCGAG ATGATTGAAGGCGGT TERM 4643 3534126 - 3534111 - g 85 -4.6 -5.16472 | overlap 3534113 AAAAACGCGAAAAAA TGGCGC AGGC GCGCAA GCTTAACGCCCTGAC yrfH 3533819 - 3534220 + | heat shock protein yrfI 3534239 - 3535123 + | heat shock protein TERM 4644 3535160 - 3535205 + T 72 -10.6 -2.91593 | gap 1, opp_overlap 3535203, overlap 3535159 3535204 CATTGCCTGATGGCG GCGCTTATCTGGCCTACAG CATCCCGCT CCGTAGGCCGGATAAG-GC ATTTATGCCGCCATC yhgE 3536941 - 3535232 - | hypothetical protein TERM 4645 3537168 - 3537156 - H 71 -3.3 -4.77165 | TTTTCCACAACAAAA GTAGG TTT CCTGC CATAATAACCGCCGC TERM 4646 3538395 - 3538428 + G 74 -9.5 -3.71649 | gap 1, overlap 3538425 ACGAAGGTTATCTTC CTGACGGCGG-ACGCC TTC GGCGTGTTGCCGCCGG TTTCCCGTTTAACCG TERM 4647 3538858 - 3538845 - g 72 -3.8 -4.74801 | overlap 3538847 3538849 CAATGGCAGGAAAAA GCCA CCGCGC TGGC GAAACTGTTCATTGA pckA 3537321 - 3538940 + | phosphoenolpyruvate carboxykinase TERM 4648 3538980 - 3538948 - T 76 -11.9 -2.54276 | opp_overlap 3538948, overlap 3538947 3538945 AGCTGTAAGGAACAG GCCGGATGGCGGCTT TGA ACGGCGTCATCCGGC GTTGAGAAGAAAGGG TERM 4649 3538989 - 3539014 + T 90 -13.4 -3.4799 | opp_overlap 3538989 3538993, overlap 3538981 3538993 ATCCGGCGTTGAGAA GAAAGGGAGG GTAATA CCTCCCTTTC TTATGCCTCTTTTGT TERM 4650 3539014 - 3538989 - T 83 -13.4 -3.28791 | opp_overlap 3538989 3538981 3538993, overlap 3538993 ATCCGGCGTTGAGAA GAAAGGGAGG GTAATA CCTCCCTTTC TTATGCCTCTTTTGT TERM 4651 3538993 - 3539010 + T 79 -8.4 -4.35091 | opp_overlap 3538993 3538989, overlap 3538989 3538981 GGCGTTGAGAAGAAA GGGAGG GTAATA CCTCCC TTTCTTATGCCTCTT TERM 4652 3539010 - 3538993 - T 79 -8.4 -4.30719 | opp_overlap 3538989 3538981 3538993, overlap 3538989 GGCGTTGAGAAGAAA GGGAGG GTAATA CCTCCC TTTCTTATGCCTCTT envZ 3540250 - 3539015 - | two-component sensor kinase EnvZ ompR 3541083 - 3540364 - | two-component response regulator OmpR TERM 4653 3541491 - 3541467 - g 90 -5.7 -5.22006 | gap 1 TCAGTATAATAAAAA GCGCCTG-CG TGAGAT CGACAGACGC GTCAGATATCTGACC greB 3541309 - 3541782 + | transcription elongation factor GreB TERM 4654 3543456 - 3543437 - g 77 -8.6 -4.10161 | gap 1 CATGATGGCGCAAAA CATCGTCGC CTG GCG-CGATG AGAACGGTCAGTTCC TERM 4655 3543775 - 3543753 - g 78 -6.8 -4.62904 | opp_overlap 3543753 3543752 3543756, overlap 3543754 AAAGAGCTGGAAAAA CCGGGCCGCG ACC CGCGTCCTGA ATTTAAAACCGCGCA TERM 4656 3544092 - 3544052 - g 84 -13.8 -3.13403 | overlap 3544063 GCGTCTGGACGAACA GCCCGGCGAAACCGCCGC TCGCC GCGGCGGCGGCGCCGATC GCGCTCAGGGCAACC TERM 4657 3544084 - 3544063 - g 89 -13.7 -3.54307 | gap 1, overlap 3544052 AACAGCCCGGCGAAA CCGCCGCTCG CCG CG-GCGGCGG CGCCGATCGCGCTCA yhgF 3541884 - 3544211 + | putative transcription accessory protein TERM 4658 3544221 - 3544254 + F 95 -13.1 -4.14739 | opp_overlap 3544222, overlap 3544222 CGCTAATCGGGTAAT ACGCAGGCCGGGTTA CTTC TTATCCGGCCTGCGA TTTTGCAATACGTCC TERM 4659 3544222 - 3544253 + F 100 -16.6 -3.08522 | opp_overlap 3544222, overlap 3544221 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4660 3544253 - 3544222 - f 88 -14.4 -3.04322 | opp_overlap 3544221 3544222 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4661 3544459 - 3544442 - f 73 -4.2 -4.7908 | AAAAAGACAAATAAA TGTTGA GCCATA TCAACA TCGGCGCAAATTATC feoA 3544648 - 3544875 + | putative ferrous iron transport protein TERM 4662 3544917 - 3544903 - g 89 -2.8 -5.56112 | opp_overlap 3544903 ATAAAAATGAAAAAA TTAACC ATT GGTTTA ATTGGTAATCCTAAT TERM 4663 3545741 - 3545752 + G 100 -5.8 -5.84381 | TCCTGAACCGCTTCC TCGG CTTA CCGA TTTTTTTGTTCGTGA feoB 3544894 - 3547212 + | ferrous iron transport protein B yhgG 3547225 - 3547461 + | hypothetical protein TERM 4664 3547467 - 3547498 + F 72 -10.2 -2.924 | gap 1, overlap 3547466 CTTGCGTTAGCCTTC GCCGGGTAGCGACGT AAC GCGTC-TTATCCGGC CTTTATCCCGCGTTA TERM 4665 3547516 - 3547545 + F 100 -15.1 -4.21462 | gap 1 TTATCCCGCGTTATG TTGCCCGGTACGCG TCA CGC-TGCCGGGCAA TTTTGCGTCATGCCT TERM 4666 3548124 - 3548154 + G 71 -8.2 -3.8647 | TGAATTTGCCGACCC GGTGATGGCGCGTA AGC TATACGCCACCGCC TTTCCTCTGGTCGAT SEN3334 3547696 - 3548622 + | hypothetical protein bioH 3549428 - 3548658 - | putative biotin biosynthesis protein TERM 4667 3548918 - 3548941 + g 75 -6 -4.62069 | gap 1 GCACCTCTACATCCG GCATAG-GCTG CGC CAGCACTACGC TTTTTAAGGTGCGGG TERM 4668 3549651 - 3549637 - g 71 -4.9 -4.56597 | opp_overlap 3549638, overlap 3549638 CGCTGCCTGCAAAAA CCGCC GCCCT GGCAG CGTCTGGTGAGCGTC yhgH 3549466 - 3550149 + | putative competence protein yhgI 3550208 - 3550783 + | hypothetical protein TERM 4669 3550801 - 3550829 + F 72 -8.8 -3.48276 | gap 1, overlap 3550802 3550827 TTTTCCCCGCATCCA TGCCCGAT-GGCG CTTG CGCCTGTCGGGCC TTGTCTGCCCCACCG TERM 4670 3550802 - 3550828 + F 78 -12.3 -2.68823 | gap 1, overlap 3550801 3550827 TTTCCCCGCATCCAT GCCCGAT-GGCG CTTG CGCCTGTCGGGC CTTGTCTGCCCCACC gntT 3551208 - 3552476 + | high-affinity gluconate transporter TERM 4671 3552565 - 3552598 + T 100 -16.9 -3.9461 | opp_overlap 3552569 3552573, overlap 3552566 3552569 3552573 CTACGTGCTCTCACC ATAATAAAGCCGGGG AAAT CCCCGGCTTTATTAC TTCTTCTTCGCGGCC TERM 4672 3552566 - 3552597 + T 100 -20.4 -2.96444 | opp_overlap 3552569 3552573, overlap 3552565 3552569 3552573 TACGTGCTCTCACCA TAATAAAGCCGGGG AAAT CCCCGGCTTTATTA CTTCTTCTTCGCGGC TERM 4673 3552594 - 3552569 - T 100 -17.7 -3.40403 | opp_overlap 3552566 3552565 3552569 3552573, overlap 3552573 GTGCTCTCACCATAA TAAAGCCGGGG AAAT CCCCGGCTTTA TTACTTCTTCTTCGC TERM 4674 3552569 - 3552594 + T 100 -17.7 -3.62255 | opp_overlap 3552569 3552573, overlap 3552566 3552565 3552573 GTGCTCTCACCATAA TAAAGCCGGGG AAAT CCCCGGCTTTA TTACTTCTTCTTCGC TERM 4675 3552573 - 3552590 + T 100 -14.1 -4.4078 | opp_overlap 3552573 3552569, overlap 3552569 3552566 3552565 TCTCACCATAATAAA GCCGGGG AAAT CCCCGGC TTTATTACTTCTTCT TERM 4676 3552590 - 3552573 - T 100 -14.1 -4.35483 | opp_overlap 3552569 3552566 3552565 3552573, overlap 3552569 TCTCACCATAATAAA GCCGGGG AAAT CCCCGGC TTTATTACTTCTTCT malQ 3554673 - 3552595 - | 4-alpha-glucanotransferase TERM 4677 3552683 - 3552706 + g 83 -5.9 -4.93296 | overlap 3552684 AACATCTGCTCCAGC GTGGCGGTG AGCTTC CGCCGCCAG TTTTTATACTGATCG TERM 4678 3554144 - 3554112 - G 73 -9.1 -3.86015 | overlap 3554140 3554141 GATTCGCCGGATAAA GCGCGTGGATCGG GTTCAGG CCGATAAACGCGC CGCCGCGTGTCGCCA TERM 4679 3554355 - 3554388 + g 76 -3 -5.00884 | opp_overlap 3554375, overlap 3554356 3554357 3554360 TCAACGTCAGGGTGT GGTAGCCCTCCGGC AATGTA GCCGGAAGGTTAAG TTTTTTACCGCCCGT TERM 4680 3554360 - 3554383 + g 71 -9.5 -3.52177 | opp_overlap 3554375, overlap 3554357 3554356 3554355 GTCAGGGTGTGGTAG CCCTCCGGC AATGTA GCCGGAAGG TTAAGTTTTTTACCG TERM 4681 3554473 - 3554483 + g 81 -2.4 -5.40072 | ACCGCGCCCCTCTAC CGGC AAC GCCA TTTTTTTACCCGCGG malP 3557076 - 3554683 - | maltodextrin phosphorylase TERM 4682 3555865 - 3555888 + g 70 -6.6 -4.11692 | ATTGGCCATGCGTAC CTGACGGTCG TGCA CCACCGCCAG TTTTGCCCATACCTG TERM 4683 3556261 - 3556275 + g 76 -2.8 -5.00884 | GCACTGGAAGTATTG CTGC ATCAGGC GCAG TTTTTTGCCCGCCGT TERM 4684 3558088 - 3558098 + G 74 -2.4 -5.06816 | ATCCGGTGATTCACG ACGC GAT GCGC TTTTTCTTACGGCAT TERM 4685 3558461 - 3558475 + G 85 -4.2 -5.26875 | ACTGGATAACGTGGA TGTCAG CAC CCGACA TTTTTTACTTAAAAG TERM 4686 3559917 - 3559904 - g 71 -4.5 -4.56775 | gap 1, opp_overlap 3559904 ATCCGGGCGGAAAAA CGACGC CCA GCG-CG TATTGCTTGATGCCT malT 3557670 - 3560375 + | MalT regulatory protein SEN3342 3560738 - 3560463 - | hypothetical protein SEN3343 3561001 - 3560741 - | conserved hypothetical protein (homologue of DnaJ: DNA damage inducible protein) rtcA 3562129 - 3561110 - | rna 3'-terminal phosphate cyclase (ec 6.5.1.4) (rna-3'-phosphate cyclase) (rna cyclase) TERM 4687 3561381 - 3561405 + g 86 -13 -3.68351 | overlap 3561364 TTTACGCCGAACGCG GCGAACAGTT CGGTC AACTGTTCGC TTTGGATCATCAGCA TERM 4688 3561851 - 3561803 - G 71 -11 -2.91873 | gap 2, overlap 3561800 3561805 ACCATCGGCAAACCA CAGCGCGGGCAGGACGGTTTGCAG CAC CAGCATACAA-C-TGCCCGCGCTG CCAATCGCGAAACGG rtcB 3563350 - 3562133 - | hypothetical protein TERM 4689 3562567 - 3562589 + g 80 -9 -4.21194 | overlap 3562568 TCGATTTTTCCACGC AGCGCTGGAG CGC CGCCAGCGCG TTTTCCATCATCGCC TERM 4690 3562568 - 3562588 + g 81 -12.5 -3.12395 | overlap 3562567 CGATTTTTCCACGCA GCGCTGGAG CGC CGCCAGCGC GTTTTCCATCATCGC TERM 4691 3563250 - 3563237 - G 75 -5.9 -4.65263 | opp_overlap 3563235 3563237 ATGTTTGAAAATAAA CGGCA TTTT CGCCG TATTAATCAGTTGCT SEN3346 3565248 - 3563695 - | hypothetical protein TERM 4692 3563866 - 3563884 + g 74 -4.5 -4.75174 | gap 1, opp_overlap 3563862 ATCGATACACACCAG GCGC-GCC TGCG GGTTGCGC TTTTTCAGTTCGATC TERM 4693 3564031 - 3564055 + g 70 -7 -4.1585 | CGCGGAGCAGTTGGT GCTGCCGCCG CCAAC CGCCGCCAGC TTTTGCGCGTTGTGC TERM 4694 3564625 - 3564641 + g 77 -3.5 -5.01732 | opp_overlap 3564625 ATTGCCTTCACGAAA CGCCAGC AGC GCGCGCG TTTTTTCCGGCAGTT TERM 4695 3565392 - 3565376 - H 89 -6.5 -5.28942 | CAGGTGAAAGAAAAA TGCCTGC ACG GCAGCCA TTAAAAAGCGATAAA rtcR 3565438 - 3567021 + | transcriptional regulatory protein glpR 3567776 - 3567018 - | glycerol-3-phosphate regulon repressor TERM 4696 3567530 - 3567542 + g 100 -9.1 -5.16151 | GGGCCGCGACTTTGC GAGCG ATG CGCTC TTTTTCTTCCGTTTG TERM 4697 3567865 - 3567844 - R 74 -5.9 -4.56597 | gap 1 CCCGGCCTGGAAAAA TATCTCGACC ACA GGCCG-GATA CGCCTCACGTTCGTT glpG 3568700 - 3567870 - | hypothetical protein glpE 3569102 - 3568776 - | hypothetical protein TERM 4698 3568993 - 3568983 - G 71 -8.2 -3.76952 | GTTAGTCAAGTGAAA CGCC TGC GGCG CATGACCCATGGCAT TERM 4699 3569251 - 3569266 + H 82 -7.6 -4.70879 | GTTTCTTTGCTATCA TGTTCG ATAA CGAACA TTTTTGAACTTTAAC TERM 4700 3570338 - 3570326 - g 74 -6.9 -4.3129 | opp_overlap 3570325 3570326 3570324, overlap 3570328 TATTCATGATGAAAA CGGCA AAG CGCCG CTGCTTTCCGTGTTT glpD 3569301 - 3570809 + | aerobic glycerol-3-phosphate dehydrogenase TERM 4701 3570819 - 3570836 + T 95 -12.7 -4.08767 | opp_overlap 3570815 3570817 3570816 TCGTAATAAAATCCG GGGCGGT TTAT ACCGCCC TTTTCGCCACATACC SEN3352 3571401 - 3570856 - | hypothetical protein SEN3353 3572964 - 3571411 - | hypothetical protein TERM 4702 3573012 - 3573043 + r 93 -7.2 -5.63517 | opp_overlap 3573011 AAACATTCACGATAG CGGCAGACAGAAGT TGAA AGTTCCGGCTGCCG TTTTTTATTTACAGG SEN3354 3574174 - 3573065 - | putative glycerol dehydrogenase TERM 4703 3573703 - 3573686 - G 77 -4.1 -4.98531 | gap 1, overlap 3573687 3573688 CCCGGAAACCAAAAA GCGTACCG GCG CGGCA-GC AATAATACTGCTGTC SEN3354A 3574512 - 3575846 + | putative MFS-family membrane transport protein TERM 4704 3576048 - 3576066 + G 81 -13.2 -2.87344 | opp_overlap 3576034 GCGGCGGGCGCGCGG TCCGTCAC CAT GTGACGGA TATCTGCGACGGCTG SEN3355 3575843 - 3577558 + | putative dehydratase TERM 4705 3577564 - 3577585 + F 79 -9.3 -4.11692 | opp_overlap 3577559, overlap 3577566 GCTTAAATAATATCC CTGGCGGGC TACG GCTCGCCTG TTTTAAGGATCAATA TERM 4706 3577566 - 3577583 + F 79 -10.5 -3.65542 | opp_overlap 3577559, overlap 3577564 TTAAATAATATCCCT GGCGGGC TACG GCTCGCC TGTTTTAAGGATCAA SEN3356 3577602 - 3578507 + | putative dihydrodipicolinate synthetase TERM 4707 3578513 - 3578542 + T 100 -8.6 -5.27335 | gap 1, opp_overlap 3578520, overlap 3578520 GGGACTTTAAGCTAT GACGAAAGCGGGC TTCTT GCCCGCTGT-GTC TTTTTATTTCAGCAC TERM 4708 3578536 - 3578520 - T 83 -10.8 -3.80461 | opp_overlap 3578513 3578520 TAAGCTATGACGAAA GCGGGC TTCTT GCCCGC TGTGTCTTTTTATTT TERM 4709 3578520 - 3578536 + T 77 -10.8 -3.40971 | opp_overlap 3578520, overlap 3578513 TAAGCTATGACGAAA GCGGGC TTCTT GCCCGC TGTGTCTTTTTATTT SEN3357 3579306 - 3578551 - | putative IclR-family transcriptional regulator TERM 4710 3578990 - 3578973 - G 77 -7.7 -4.27117 | gap 1, opp_overlap 3578982 CTTTCAGAAGATAAA TGG-GGGC ATC GCCCTCCA GAACGCCAAGATGGC TERM 4711 3579114 - 3579126 + g 70 -2.7 -4.7373 | ACAGGCGTAGCCCCA GATAA TAC TTGTC TTTTTCCTGGCGTAA TERM 4712 3579448 - 3579465 + r 90 -14.1 -3.31322 | opp_overlap 3579448 TACCACGATAAAAAA CGGGGCC GTTT GGCCCCG TTCTCAAGCGTTAAA TERM 4713 3579465 - 3579448 - R 100 -14.1 -5.32882 | opp_overlap 3579448 TACCACGATAAAAAA CGGGGCC GTTT GGCCCCG TTCTCAAGCGTTAAA glgP 3581931 - 3579484 - | glycogen phosphorylase TERM 4714 3580522 - 3580534 + g 71 -10.5 -3.18681 | opp_overlap 3580492 CGCCAGCCAGCGGCG CGGCG TAA CGCCG TTAGTGACGTTACAA TERM 4715 3581057 - 3581030 - G 100 -15.6 -3.33492 | overlap 3581031 3581033 TTATGCAGTTGATAA TGACGGTGCAGG ATAT CCTGCACCGTCG CCGAGACCAGAAAAT TERM 4716 3581056 - 3581031 - G 100 -19.1 -2.59881 | overlap 3581030 3581033 TATGCAGTTGATAAT GACGGTGCAGG ATAT CCTGCACCGTC GCCGAGACCAGAAAA TERM 4717 3581054 - 3581033 - G 86 -15.9 -2.83822 | overlap 3581031 3581030 TGCAGTTGATAATGA CGGTGCAGG ATAT CCTGCACCG TCGCCGAGACCAGAA TERM 4718 3581090 - 3581072 - G 79 -7.4 -4.50976 | GCCGAGACCAGAAAA TACTCCTG GCG CAGGCGTA GCTCTCGTCCGGAAT glgA 3583384 - 3581951 - | glycogen synthase TERM 4719 3582092 - 3582072 - G 72 -4 -4.75289 | gap 2, overlap 3582073 3582075 3582076 GACCACAACACAAAA GC-ACGC-CG AAT CGCGCGTAGC AACGACCAGGCATTA glgC 3584679 - 3583384 - | glucose-1-phosphate adenyltransferase glgX 3586670 - 3584694 - | glycogen operon protein TERM 4720 3586491 - 3586471 - G 70 -8.9 -3.64103 | overlap 3586472 TAGCCATAGCGCAAA CCTGGCCTG GCG CCGGCCAGA TAACCATGCCAGACA TERM 4721 3586527 - 3586495 - G 71 -10 -3.48276 | overlap 3586498 3586507 GCGCCGGCCAGATAA CCATGCCAG-ACATCG CCG CGACGTCCTGGCA-GG TCATAGCGACGCTCA TERM 4722 3586525 - 3586498 - G 71 -11.4 -2.88822 | gap 1, overlap 3586495 3586507 CCGGCCAGATAACCA TGCCAG-ACATCG CCG CGACGTCCTGGCA GGTCATAGCGACGCT TERM 4723 3586577 - 3586562 - G 74 -3.2 -4.8622 | overlap 3586563 CTCGGGAATCAAAAA CGCACA GCTC TACGCG CTCCGCATGGGCGGA TERM 4724 3586612 - 3586598 - G 74 -10 -3.6422 | overlap 3586596 CATGGGCGGAAAAGA GCGTGA AAT TCACGC CATGACCGTCATACG glgB 3588853 - 3586667 - | 1,4-alpha-glucan branching enzyme TERM 4725 3589102 - 3589087 - R 91 -6.1 -5.48825 | opp_overlap 3589086 TATTACGCAAAAAAA GGGTG ACGATG CACCC CTGGTTTAACACAAA TERM 4726 3589135 - 3589148 + r 73 -9.5 -3.30124 | TCCCCGCCGGATGGC GGCGC TGAC GCGCC TTATCCGGCCTACAG asd 3590306 - 3589200 - | aspartate-semialdehyde dehydrogenase TERM 4727 3590665 - 3590640 - R 93 -6.2 -5.80364 | gap 2 ACCTCAATAAAAAAA CCGGGT-A-GCG ATTA CGCCTTACCCGG CTTACGGTATCGATA gntU 3592070 - 3590730 - | low-affinity gluconate transporter TERM 4728 3591621 - 3591603 - G 95 -8 -5.10461 | overlap 3591604 CCCAGGCAACAAAAA CGCCGCGG CTG CCGCCACG CCCGCAAACAGCGGA TERM 4729 3592011 - 3591978 - G 95 -15.3 -3.24188 | opp_overlap 3591987 TGAGACGACCATTAA CGCGACGAAGGCGTG CATA CGCGCCTTCATCACG AGAAACAGCAGCAGT gntK 3592600 - 3592067 - | putative gluconokinase gntR 3593734 - 3592739 - | gluconate utilization operon repressor TERM 4730 3593226 - 3593193 - G 75 -12.5 -2.64422 | gap 1, opp_overlap 3593199, overlap 3593183 AGATAGGCGATATGA CGATGACCACGCGCGA TAA TCGCG-GCGGTCATCT GACGGGCGGCCTCGA yhhW 3594800 - 3594105 - | hypothetical protein yhhX 3595961 - 3594924 - | putative oxidoreductase TERM 4731 3596238 - 3596223 - H 100 -10.4 -6.17292 | AAACCCAAAAAAAAA GCCAGC AAAA GCTGGC CAAAATAATACTGGA yhhY 3596429 - 3596917 + | putative acetyltransferase TERM 4732 3597935 - 3597922 - g 87 -2.4 -5.60993 | TCTCGCACAAAAAAA TGAC ATACCG GTCA TCATCAATCCAGCGC SEN3370 3597182 - 3598396 + | putative kinase/trancriptional regulatory protein TERM 4733 3598727 - 3598715 - g 81 -4.1 -5.2853 | CAGCTAAAAATAAAA CCAAA CGC TCTGG AGTCCATTAAAGAGT SEN3371 3598412 - 3599173 + | hypothetical protein TERM 4734 3599205 - 3599178 - f 100 -5.6 -5.86976 | opp_overlap 3599182 3599199, overlap 3599181 3599182 CCAGAAAATAAAAAA CAATGGAGTAAC GAAA GTTACTCCTTTT ATAAAATATAAGGAT TERM 4735 3599202 - 3599181 - f 85 -7.3 -4.94109 | opp_overlap 3599182 3599199, overlap 3599178 3599182 GAAAATAAAAAACAA TGGAGTAAC GAAA GTTACTCCT TTTATAAAATATAAG TERM 4736 3599182 - 3599201 + F 93 -10.8 -4.41548 | opp_overlap 3599181 3599178 3599182, overlap 3599199 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA TERM 4737 3599201 - 3599182 - f 79 -10.8 -3.52805 | opp_overlap 3599182 3599199, overlap 3599181 3599178 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA SEN3372 3599227 - 3600198 + | hypothetical protein SEN3373 3600195 - 3601229 + | puative phophotriesterase TERM 4738 3601262 - 3601238 - T 86 -12.1 -3.62591 | overlap 3601240 GGCATAATCTGCAAA TAGCCCGGTGT CTG ACACCGGGCCT GGAATTAAAAATCAG TERM 4739 3601260 - 3601240 - T 100 -16.9 -3.39028 | overlap 3601238 CATAATCTGCAAATA GCCCGGTGT CTG ACACCGGGC CTGGAATTAAAAATC ggt 3603016 - 3601274 - | gamma-glutamyltranspeptidase precursor TERM 4740 3601862 - 3601879 + g 71 -4.7 -4.55287 | overlap 3601864 CTGGTTGCTTTCATA CGGGGCG AGCT TGCCCGG TTTTATCTGGCTGGA yhhA 3603142 - 3603558 + | hypothetical protein ugpQ 3604311 - 3603571 - | glycerophosphoryl diester phosphodiesterase TERM 4741 3603667 - 3603620 - G 71 -11.5 -2.87564 | gap 3, opp_overlap 3603628, overlap 3603623 3603627 CGATCGGTGCAGATA CAATCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGAC-TG-ATTG ACGGTATACACCAGA TERM 4742 3603662 - 3603627 - G 72 -11.8 -2.64877 | gap 1, opp_overlap 3603628, overlap 3603623 3603620 TGCAGATACAATCCA CGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGACT GATTGACGGTATACA TERM 4743 3603932 - 3603879 - G 70 -5.2 -4.39696 | gap 3, opp_overlap 3603909 3603919, overlap 3603882 TCTCAAAGGAAGAAA GCAGCGGCGGCGTCATCCCGGCCCACA GTT CGCGGGC-GGC-CGACGCCAC-GACGC GTCCTGTTAGCCTTC ugpC 3605378 - 3604308 - | sn-Glycerol-3-phosphate transport ATP-binding protein ugpE 3606225 - 3605380 - | sn-Glycerol-3-phosphate transport system permease protein TERM 4744 3605684 - 3605668 - G 91 -10.1 -4.57073 | overlap 3605652 GATGTCGCGGAAAAA GCGCATC GGC GACGCGC CGTCAATACGGGCCG ugpA 3607109 - 3606222 - | glycerol-3-phosphate transport system permease protein TERM 4745 3607188 - 3607152 - R 81 -13.1 -2.71011 | opp_overlap 3607142 3607177 3607177 ATGGCGGTGCAAGCA CCTTATCCGGCCTACAA ACG CTGTAGGCCTGATAAGC GCAGCGCCATCAGGC ugpB 3608530 - 3607214 - | glycerol-3-phosphate-binding periplasmic protein TERM 4746 3607423 - 3607433 + g 72 -2.4 -4.93296 | overlap 3607422 GGCGAGTGGCGATAT CCGC ACC GGGG TTTTTATCGTAATAA TERM 4747 3607486 - 3607500 + g 85 -4.9 -5.16237 | overlap 3607487 AGGCGGCGGTGGTAA TCGGC AGGTA GCCGG TTTTTTGATGCCATT TERM 4748 3608559 - 3608572 + r 72 -5.2 -4.66537 | opp_overlap 3608569, overlap 3608558 TTTTGTGCCGGGATG CGCG ATATCA CGCG TTTTATGTTCGCGGG TERM 4749 3608645 - 3608619 - R 70 -2.4 -5.04175 | overlap 3608622 CGAATGACAGAAAAA TAACTTTTTTAT TAC AAAAAAAAGATA GTAAGGCGACAGAGA SEN3381 3609157 - 3608789 - | death on curing protein yhhV 3609381 - 3609154 - | prevent host death protein TERM 4750 3609442 - 3609429 - R 100 -8.1 -5.65177 | opp_overlap 3609429, overlap 3609382 3609381 ACACGTACAAAAAAA GAGCC ATCA GGCTC TTTTGAAAAATTTTA TERM 4751 3609429 - 3609442 + r 76 -8.1 -4.14013 | opp_overlap 3609382 3609381 3609429 ACACGTACAAAAAAA GAGCC ATCA GGCTC TTTTGAAAAATTTTA livF 3610219 - 3609506 - | high-affinity branched-chain amino acid transport ATP-binding protein livG 3610988 - 3610221 - | high-affinity branched-chain amino acid transport ATP-binding protein livM 3612262 - 3610985 - | high-affinity branched-chain amino acid transport system permease protein livH 3613185 - 3612259 - | high-affinity branched-chain amino acid transport system permease protein TERM 4752 3613223 - 3613203 - R 75 -9.6 -3.55622 | overlap 3613204 GGTAACCTTTTTAAA CCCGCCCG GCGTG CGGGCGGT GGGATAACTTATCTT TERM 4753 3613222 - 3613204 - R 81 -13.1 -2.73159 | overlap 3613203 GTAACCTTTTTAAAC CCGCCCG GCGTG CGGGCGG TGGGATAACTTATCT livK 3614354 - 3613245 - | leucine-specific binding protein TERM 4754 3613793 - 3613776 - G 79 -2.7 -5.2112 | opp_overlap 3613784, overlap 3613784 AATACCATCAAAAAA GACAATA TTGG CATTGCC CTGCTTCAGGCCATC yhhK 3614775 - 3615158 + | hypothetical protein TERM 4755 3615191 - 3615165 - g 89 -8.7 -4.66535 | gap 1 AAGCGCTAAAAGAAA GCCGGAT-GGCG CTGA CGCTTATCCGGC CTACATGCCGGGAGA SEN3389 3615136 - 3615270 + | hypothetical protein TERM 4756 3615274 - 3615305 + T 73 -10.8 -3.06796 | opp_overlap 3615273 3615274 GGCAAGTTATGAAAT CCCCGGGAGCTTAC ATAA GTAAGTGACCGGGG TTGAATAACGTAGCC livJ 3616451 - 3615354 - | leu/ile/val/thr-binding protein TERM 4757 3615942 - 3615977 + g 71 -6 -4.3208 | opp_overlap 3615962 3615963 CAGCCCTTCGCCGTA CTGCTGCTTATCGTGG ATAA TCGCGATGCGCTGCGG TTTTACCTTCTCCAG TERM 4758 3616074 - 3616096 + g 70 -9.8 -3.41051 | GCCGCGTGCGGTCAG CTCCGGCG CGGTCGC CGCCGGGG TTATCATCAGGATGC TERM 4759 3616757 - 3616736 - R 100 -10.9 -5.49579 | opp_overlap 3616736 CTACAAAAAACAAAA CCCCCGAAT TCAC ATTCGAGGG TTCATTGGCAATTCG TERM 4760 3616783 - 3616803 + r 76 -5.3 -4.74801 | opp_overlap 3616782, overlap 3616772 ATTCGCGAAGATTAC GCTTCGATC GCA GCGCGAAGC TTTTTCATGGCGTTC rpoH 3617633 - 3616779 - | RNA polymerase sigma-32 factor TERM 4761 3617826 - 3617862 + r 93 -14.5 -3.30903 | opp_overlap 3617819 3617803 3617822 AGAGACAACAGGGAC TCTTTCCCTGCGAACGG AAG CCCATTGCAGGGAAAGA TTATACCACGATTTT ftsX 3618934 - 3617879 - | cell division protein ftsE 3619595 - 3618927 - | cell division ATP-binding protein FtsE TERM 4762 3619140 - 3619166 + g 89 -13.6 -3.65046 | overlap 3619143 CGCTGGCTTATTGAC CACCGCGCGGGC GAT GCCCACGCGCTG TTGTTCGCCTCCGGA TERM 4763 3619143 - 3619163 + g 78 -13.9 -2.64045 | overlap 3619140 TGGCTTATTGACCAC CGCGCGGGC GAT GCCCACGCG CTGTTGTTCGCCTCC ftsY 3621073 - 3619598 - | cell division protein TERM 4764 3619652 - 3619632 - G 73 -5.3 -4.63486 | overlap 3619633 3619647 AGTGCCTCAATAAAA TCGTCCGCC TTA AACGGACGC AAATCCTCGATACGT TERM 4765 3620028 - 3620002 - G 75 -6.4 -4.61231 | opp_overlap 3620005, overlap 3620003 3620005 GGATAGCGTCAAAAA TCACCGAGGCGG AGT CCGCGCCGGTAT GCTGGGCGATAACCG TERM 4766 3620027 - 3620003 - G 70 -9.9 -3.36256 | opp_overlap 3620005, overlap 3620002 3620005 GATAGCGTCAAAAAT CACCGAGGCGG AGT CCGCGCCGGTA TGCTGGGCGATAACC TERM 4767 3620025 - 3620005 - G 71 -10.3 -3.24422 | opp_overlap 3620005, overlap 3620003 3620002 TAGCGTCAAAAATCA CCGAGGCGG AGT CCGCGCCGG TATGCTGGGCGATAA yhhF 3621199 - 3621795 + | hypothetical protein yhhL 3621782 - 3622054 + | hypothetical protein yhhM 3622447 - 3622076 - | hypothetical protein TERM 4768 3622341 - 3622357 + g 78 -6.5 -4.58283 | overlap 3622354 TTTTGCTGTAACGGC GCCGC CTCATTA GCGGC TTTTTCCCGCCGTTG TERM 4769 3622659 - 3622673 + G 73 -5.6 -4.57569 | overlap 3622650 3622655 CCTATCGCGGGCCAG CCTGGC AAC GCTGGG TTTTTAAGCCCGTCA yhhN 3622589 - 3623215 + | hypothetical protein TERM 4770 3623230 - 3623249 + F 80 -12.2 -2.95223 | opp_overlap 3623222 3623223, overlap 3623244 AATAATAGCGCTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTCCGGTTA TERM 4771 3623252 - 3623293 + F 75 -9.5 -3.48593 | opp_overlap 3623222 3623223, overlap 3623244 3623253 GTCGACTCCAGAGTG TATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGACG TTATGTCGACCCCTG TERM 4772 3623253 - 3623292 + F 71 -10.8 -2.68942 | opp_overlap 3623222 3623223, overlap 3623244 3623252 TCGACTCCAGAGTGT ATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGAC GTTATGTCGACCCCT TERM 4773 3623749 - 3623760 + G 71 -7.2 -3.96327 | opp_overlap 3623742 TTTAACCACCCGTTC GGCC AACT GGCC TTTATCGTCACCACT TERM 4774 3623902 - 3623920 + G 78 -11.8 -3.17051 | overlap 3623900 GGCGCGACGGCGGAG GCAGCAAT GGT ATTGCTGC TGTTCCTCATCGGCG TERM 4775 3624185 - 3624149 - g 95 -15.3 -3.73224 | opp_overlap 3624150 CCAGCTTTGATGAAA GCGCGCT-CACCGGCGA GTCTA TC-CCGGTGGAGCGCGC AACGGGCGACAAAGT zntA 3623296 - 3625494 + | heavy metal-transporting ATPase TERM 4776 3625505 - 3625527 + F 93 -14.8 -3.30007 | overlap 3625503 3625518 3625520 3625521 ACTAATCTTCTCCCG CCCGGCGGCG TCG TGTCGCCGGG TTATCCCGCGGTATT TERM 4777 3625952 - 3625921 - g 77 -3.6 -5.05782 | gap 1, overlap 3625922 ACGCATGTTAAAAAA TCAGCGCGATCCCGC CTC GCTGGA-CGCCATGA ACACGCTGTTAACCA TERM 4778 3626400 - 3626382 - g 70 -8.8 -3.70902 | opp_overlap 3626385, overlap 3626383 3626385 TGGCGCACATTCAAA CGATCGCC GAC GGCGATCT TACCCATGAGATAGA TERM 4779 3626399 - 3626383 - g 72 -12.3 -2.82327 | opp_overlap 3626385, overlap 3626382 3626385 GGCGCACATTCAAAC GATCGCC GAC GGCGATC TTACCCATGAGATAG tcp 3625694 - 3627337 + | methyl-accepting chemotaxis citrate transducer yhhP 3627606 - 3627361 - | hypothetical protein yhhQ 3627776 - 3628441 + | hypothetical protein TERM 4780 3628614 - 3628592 - g 87 -8.3 -4.6391 | AACAACGATACAAAA GCGTCGGCA GAAAG CGCCGCCGC AGAAAGCCAGGCCTC SEN3403 3628514 - 3629071 + | putative lipoprotein TERM 4781 3629089 - 3629116 + T 100 -14.1 -5.40072 | TTTACGACGATGATG CGGCCTCCGGC AGTGCA GACGGAGGCCG TTTTTTTAAGCGCCA yhhS 3630292 - 3629075 - | hypothetical protein TERM 4782 3629796 - 3629779 - G 71 -10.5 -3.18945 | overlap 3629777 CCCAGGCATAACACA GCACGCC CAGC GGCGCGC CCATCGCCATTGCGC TERM 4783 3630005 - 3629955 - G 71 -6.1 -4.2704 | gap 2, overlap 3629959 CCCAGTAGCAACAAA CTGATCATCGGCCAGGCGCTGGCGA TAT CCGCCAGCAGGTAGCCGA-G-TCCG CTTAAAAAACAGCCG TERM 4784 3631201 - 3631224 + G 72 -3.8 -4.77438 | TTTAACGGTTTTTAC GAGTGCGT ACTGGTCG GCGCGCTC TTTTTGCTGGTCCAT yhhT 3630424 - 3631473 + | hypothetical protein acpT 3631525 - 3632103 + | hypothetical protein nikR 3632195 - 3632596 + | nickel responsive regulator yhhJ 3633809 - 3632685 - | putative ABC-2 type superfamily transport protein yhiH 3636550 - 3633809 - | hypothetical ABC transporter ATP-binding protein TERM 4785 3635654 - 3635641 - G 70 -3.1 -4.7629 | gap 1 CGAGGAAGCCAAAAA TCTCGC CGC GCG-GA ATGCGGAAATTAACA TERM 4786 3636467 - 3636477 + g 81 -6.8 -4.68994 | CAGCGTGATATTGTT CAGC GCG GCTG TTTTTCCGTAATGCT yhiI 3637614 - 3636547 - | putative HlyD family secretion protein TERM 4787 3636618 - 3636629 + g 74 -7.2 -4.1964 | opp_overlap 3636607 GAACCCAGGCCATTC CCGG CAAA CCGG TTTTGACATATTCCA TERM 4788 3636710 - 3636725 + g 70 -6.8 -4.11394 | overlap 3636711 AGCTTCAGTCGTTCA TCGTGG GTTT CCACGG TTTTGGGCGTGAACT TERM 4789 3637259 - 3637271 + g 70 -9.1 -3.71645 | TGTTTGACGACCGAC TGCGC GGC GCGCA TTTCACTCTGGCGTT yhiN 3639116 - 3637920 - | hypothetical protein TERM 4790 3638409 - 3638399 - G 77 -8.2 -4.17089 | TGGAAATCTGTAAAA CGGC GGG GCCG GACAGCCCACGATGG TERM 4791 3638826 - 3638816 - G 86 -6.8 -5.07053 | opp_overlap 3638816 3638815 AATCATCGCAAAAAA GCTG TCC CAGC GTTTTCTCATACCAG TERM 4792 3639366 - 3639386 + H 76 -4 -4.95167 | gap 1 TACATTTGTTTGCTG GCCTGG-AT TTAC ATACCGGGC TTTTATTATTGCTTG TERM 4793 3639966 - 3639947 - g 74 -4.2 -4.68655 | overlap 3639943 GAACGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT pitA 3639470 - 3640843 + | putative low-affinity inorganic phosphate transporter TERM 4794 3640974 - 3640953 - T 86 -11.5 -3.68988 | opp_overlap 3640953 GCTTATCTAACACAA GCGGGTCAG GAAA CTGGCCCGC TTTTTTCATTCAGTG TERM 4795 3640953 - 3640974 + T 100 -13.7 -5.28481 | opp_overlap 3640953 GCTTATCTAACACAA GCGGGTCAG GAAA CTGGCCCGC TTTTTTCATTCAGTG uspB 3641319 - 3640984 - | universal stress protein B uspA 3641707 - 3642141 + | universal stress protein A TERM 4796 3642254 - 3642237 - f 74 -8.3 -3.99374 | opp_overlap 3642237 GGTTATCAACAACAA CGCCCGC TTCT GTGGGCG TTTTGTTTATCCCCC TERM 4797 3642237 - 3642254 + F 100 -10.5 -4.99043 | opp_overlap 3642237 GGTTATCAACAACAA CGCCCGC TTCT GTGGGCG TTTTGTTTATCCCCC TERM 4798 3642559 - 3642582 + G 77 -4.4 -4.8622 | overlap 3642561 CGATTTGGCTATTAC GGCGTCCAGG GCAT CCTGGCGGTC TTTTTCGTTAAACAA TERM 4799 3642729 - 3642709 - g 76 -10.3 -3.76224 | opp_overlap 3642709 3642708 CTGTTAGGGACTAAA CGCACCCTG GTC CTGGGCGCG ATTGTGCTGGCGATT yhiP 3642466 - 3643938 + | putative PTR2 family transport protein yhiQ 3644788 - 3644030 - | hypothetical protein TERM 4800 3644761 - 3644744 - G 74 -9.8 -3.7319 | opp_overlap 3644743 3644742 AGCCAGAACAGATAA GGCGCC GTCTGT GGCGCC CGTTTCATCCATTAA prlC 3646837 - 3644795 - | oligopeptidase A TERM 4801 3645890 - 3645904 + g 71 -4.2 -4.59773 | overlap 3645892 TTTGGCGAAGGCGCG CAGCTG GGC CAGCTC TTTTTCCCCCTGCGG TERM 4802 3647013 - 3646982 - R 73 -10.3 -3.01712 | gap 1, opp_overlap 3647007 GCCGCCCCTTTAACA TCATCCCGGCTTAC GTTTT ATAAGCCGGG-TGA CAACGTCAGCGCGTT SEN3418 3648290 - 3647019 - | putative phosphatase TERM 4803 3647150 - 3647174 + g 71 -11.4 -2.98823 | opp_overlap 3647139, overlap 3647167 TTAACGCCTGACACT GCGCTGACGA CAGGT TCGGCAGCGC TGTCTGTAGCAGAAC TERM 4804 3648174 - 3648162 - G 70 -9.1 -3.76492 | opp_overlap 3648162 3648162, overlap 3648163 CTCAAGGTCATTAAA GGCGA CGC TCGCC GAGTCGGGCGTCACG TERM 4805 3648936 - 3648900 - g 75 -5.7 -4.59773 | overlap 3648906 GCGGAGTTTCAAAAA GACAACCGCGCCCGCGT GGA ACGCGCTGACGGCTATC AGCAACTGAAAGCCA TERM 4806 3649033 - 3649012 - g 95 -10.9 -4.58773 | overlap 3649006 CTTATGAAATGAAAA CCGACTACC AGGC GGTAGTCAG CGGCATCAGCGAGGG yhiR 3648501 - 3649343 + | hypothetical protein TERM 4807 3650168 - 3650158 - g 80 -4.6 -5.00884 | overlap 3650160 AGCGGTGGTAAAAAA CGCC GAC GGCA GTCTGACTCTGGAAC gor 3649448 - 3650800 + | glutathione reductase TERM 4808 3650838 - 3650803 - T 82 -13.3 -3.03441 | opp_overlap 3650798 GACCATGCGTTAATA TCTTGTGCGCCCATC TTCAAG GGTGGGCGCACAAGC CTGCATGATTAATAC SEN3421 3651890 - 3650847 - | L-asparginase TERM 4809 3651872 - 3651889 + g 70 -2.8 -4.75472 | opp_overlap 3651861 GCAACACGGTGGCCA TGAAAA CTCTGA TTTTCA TTTTCTTCCTCTGAA SEN3422 3653268 - 3651949 - | anaerobic C4 dicarboxylate membrane transport protein TERM 4810 3652134 - 3652123 - G 71 -7.2 -3.94772 | overlap 3652121 CGGAATAAAGAAATA GCCG TTAA CGGC AGGCCAGGAGCCGAT SEN3423 3654167 - 3653322 - | putative carbohydrate kinase TERM 4811 3653406 - 3653416 + g 78 -6.8 -4.56969 | overlap 3653404 3653405 GCCCTGCCGCATGGC GCGT AGC ACGC TTTCTTTATCGGGTT SEN3424 3655208 - 3654231 - | putative phosphosugar-binding protein TERM 4812 3655350 - 3655326 - R 100 -11.5 -6.02546 | GGAAACCAAAAAAAA TCGGGATCC GCGATCT GGATCCCGA TTCAGCCTGCTCTTC TERM 4813 3655387 - 3655400 + r 72 -6.7 -4.36914 | opp_overlap 3655387 GTAATGCTGACATCA TACGG TAAA CCGTA TTTTATCGCCGACAA SEN3425 3656103 - 3655384 - | gntR family regulatory protein TERM 4814 3655435 - 3655446 + g 71 -5.8 -4.33819 | opp_overlap 3655420 3655435 3655431 CTGTTGCGAAACGCA GGAG AGTT CTCC TTTGTTATCAATCAT TERM 4815 3656048 - 3656078 + g 84 -9 -4.35518 | overlap 3656045 3656034 GCCTCTTTTAAGGCG GCTTCAAGCTGCTT ATA AAGCGGTTTGGCGC TTTTACTGTCGGGTT treF 3656429 - 3658078 + | cytoplasmic trehalase TERM 4816 3658111 - 3658132 + T 88 -5.9 -5.60689 | opp_overlap 3658111 GAATCGCATCATAAA TGGCTGA CTGAATTT TCAGCCA TTTTTTATTGTCTGC SEN3427 3659680 - 3658091 - | hypothetical protein TERM 4817 3659718 - 3659696 - H 84 -8.4 -4.57073 | opp_overlap 3659699 3659709, overlap 3659699 TATCTTCCCTAAAAA GACGATCCCG CGA CGAGATCTTC GTTTTCTTTTAATTA TERM 4818 3659709 - 3659719 + H 75 -3.2 -5.19998 | opp_overlap 3659699 3659696, overlap 3659699 AAGACGATCCCGCGA CGAG ATC TTCG TTTTCTTTTAATTAT TERM 4819 3660226 - 3660253 + G 100 -12.1 -5.38249 | overlap 3660206 GCGAAACGCTTATTG CGCTGATGTTC AGCATC GGACATCAGCG TTTTTTATCATTAAT SEN3428 3659961 - 3660317 + | phage-like lysozyme yhjB 3660925 - 3660323 - | hypothetical luxR-family transcriptional regulator TERM 4820 3660781 - 3660795 + g 71 -4.2 -4.64992 | overlap 3660781 3660780 TATCCAGCATGACCA GCGC ATCCGGC GCGC TTTCTATTTTTTGCC yhjC 3661556 - 3662455 + | hypothetical lysR-family transcriptional regulator yhjD 3662528 - 3663556 + | hypothetical protein TERM 4821 3664275 - 3664301 + G 74 -10 -3.64822 | GACGATAGGTATTTT CGCGCCGCTGCT GCT GGCGCTGGCGCG TTTCGGTCAGGGACT yhjE 3663907 - 3665229 + | hypothetical metabolite transport protein TERM 4822 3665232 - 3665260 + T 74 -11 -2.80464 | gap 1, opp_overlap 3665232, overlap 3665231 3665256 TCAGGCGTTGTAATA G-GGCGCCGGATG GCGT CATCCGGCGCGAC GTTTCACGTTACTGC TERM 4823 3665259 - 3665232 - T 75 -11.2 -3.02144 | opp_overlap 3665232 3665231 3665256 TCAGGCGTTGTAATA GGGCGCCGGATG GCGT CATCCGGCGCGA CGTTTCACGTTACTG yhjG 3667329 - 3665269 - | hypothetical protein TERM 4824 3665400 - 3665431 + g 95 -10.1 -4.70659 | gap 1, opp_overlap 3665403 CCGCGCCGCGCGCAA TCAGCGGGCCGGGC TTGAC GCCC-GCCTGCGGA TTTTTAAATGTCCCA yhjH 3668206 - 3667439 - | hypothetical protein TERM 4825 3668507 - 3668489 - g 73 -8.8 -3.86822 | opp_overlap 3668491 3668495, overlap 3668490 GAACTGTCGCAGAAA GGCGCTGA TGT TCAGCGCG GCTTCGGCGGCGACA TERM 4826 3668506 - 3668490 - g 75 -12.3 -2.91772 | opp_overlap 3668491 3668495, overlap 3668489 AACTGTCGCAGAAAG GCGCTGA TGT TCAGCGC GGCTTCGGCGGCGAC kdgK 3668435 - 3669364 + | 2-dehydro-3-deoxygluconokinase TERM 4827 3669388 - 3669417 + T 74 -10.7 -3.25823 | gap 1, overlap 3669403 CTCTTGCCCGGTGGC GCTG-CGCTTACCG GGC CGGCAGGCGGCAGC TTACTGTGCCGCCGG yhjJ 3670905 - 3669418 - | putative zinc-protease precursor TERM 4828 3670960 - 3670940 - R 78 -5.3 -5.06414 | TCCTGGTAATAAAAA GACAGCCCC GGC AGGGATGCC TGAATATGACGTAAA TERM 4829 3671112 - 3671083 - R 75 -10 -3.59315 | overlap 3671085 TCAATTATGCGCAAA CACCCGCAGTCC TGGAAG GGACTACGGGCA TAAGTGGCGAGATTA TERM 4830 3671110 - 3671085 - R 85 -12.6 -3.37259 | overlap 3671083 AATTATGCGCAAACA CCCGCAGTCC TGGAAG GGACTACGGG CATAAGTGGCGAGAT dctA 3672411 - 3671125 - | C4-dicarboxylate transport protein TERM 4831 3672547 - 3672564 + r 79 -2.6 -5.28315 | overlap 3672546 3672549 AAAAAGTTTGAGCTG GCTCGC ACAAGC GCGACC TTTTTTAACTTTTGT yhjK 3674488 - 3672569 - | hypothetical protein TERM 4832 3673838 - 3673860 + g 86 -12 -3.79519 | opp_overlap 3673837 3673838 GGGCAGCTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 4833 3673860 - 3673838 - G 72 -12 -2.73124 | opp_overlap 3673838, overlap 3673837 GGGCAGCTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 4834 3674549 - 3674509 - R 76 -2 -5.28983 | gap 1, overlap 3674515 3674518 TGCAAAAGACAAAAA CAAACACCATGACAACGGC CGCA ACCATTGCCATC-TGTTTA ATTGTTAACGAGCGG bcsC 3678180 - 3674749 - | Cellulose biosynthesis protein subunit C TERM 4835 3676365 - 3676349 - G 71 -10.8 -3.30338 | opp_overlap 3676348 3676349 AGAACGGCGTCATAA GCGGCG CGGGC CGCCGC ATTATCGCCACGCTG TERM 4836 3677218 - 3677238 + g 78 -6.8 -4.59773 | gap 1 ATCGCGGCTGCTGCT GTGC-GGCG CCAT CGCCAGCGC TTTTTCAAACTGCGC TERM 4837 3677561 - 3677607 + g 77 -8.1 -4.07568 | gap 2 TTTATCTGCTGGTAC CAGATGGCGGAGGCCGCGCTGCG TCC CGTA-C-TGGATTTCGCCATCTG TTTTAGCACCGCAAA bcsZ 3679382 - 3678273 - | endoglucanase TERM 4838 3678534 - 3678546 + g 81 -6.9 -4.81083 | opp_overlap 3678523 GACATCCACTTTCTC CGGTG GAA CGCCG TTTTTCATCGTTAAC TERM 4839 3678865 - 3678877 + g 80 -9.1 -4.09685 | CGCCAGCTATTCGCC TCGGC AAA GCCGA TTTTGCCAGGTAGCA bcsB 3681686 - 3679386 - | cellulose biosynthesis protein subunit B bcsA 3684321 - 3681697 - | cellulose biosynthesis protein catalytic subunit TERM 4840 3683047 - 3683036 - G 75 -5.8 -4.65933 | opp_overlap 3683035 GATCCGCAAAAGAAA GTGG CGTC CCAC ATATCGTTACCGTCC TERM 4841 3683168 - 3683150 - G 77 -7.4 -4.30719 | TCCGGGGAGAAGAAA TGATGCGG CGT CTGCATCA TCGCCAGCTGTTTTT TERM 4842 3684241 - 3684229 - G 74 -10.5 -3.53224 | GAGCGCTGCGCTAAA CGGCG ACG CGCCG TGGCGGCGGTAACCC yhjQ 3685070 - 3684318 - | hypothetical protein yhjR 3685274 - 3685071 - | hypothetical protein TERM 4843 3685806 - 3685789 - g 72 -2.6 -4.87665 | CCGGATTCAGAAAAA GGGCTA TACTCT TTGCCC CACGATTTGCTTTGT TERM 4844 3686106 - 3686095 - g 91 -7.2 -4.8622 | overlap 3686096 3686097 TGGTGTAACGAAAAA GGCG TCAG CGCC CGACAGCAGTTATTG TERM 4845 3686787 - 3686805 + G 76 -3.1 -5.01535 | gap 1, opp_overlap 3686765, overlap 3686781 TATTATGACCATCGG CGGCAACC GTCT GGT-GCTG TTTTTATCATTCTGC bcsE 3685519 - 3687090 + | protease bcsF 3687087 - 3687278 + | hypothetical protein TERM 4846 3687649 - 3687662 + G 87 -2.3 -5.61596 | overlap 3687650 CGCCATCTTCGTACT GCTGG TTGC CTGGC TTTTTTTATCACAGT TERM 4847 3688340 - 3688291 - g 88 -11.3 -4.10007 | opp_overlap 3688291 3688335, overlap 3688292 AGAAGTTCGCGAAAA CGGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCCC TGCTGTCATTCGACG TERM 4848 3688339 - 3688292 - g 91 -14.8 -3.05522 | opp_overlap 3688291 3688335, overlap 3688291 GAAGTTCGCGAAAAC GGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCC CTGCTGTCATTCGAC TERM 4849 3688516 - 3688494 - g 81 -8.5 -4.25104 | gap 1, opp_overlap 3688479, overlap 3688509 CCGGCGTCAGCAAAA CG-GCGGATT ATAA AATCCGCGCG CAGAAACTGTTCGAT bcsG 3687275 - 3688954 + | putative endoglucanase TERM 4850 3688995 - 3688956 - f 100 -18.6 -3.73775 | opp_overlap 3688964 3688981, overlap 3688964 CTTACCCGCAGTAAA CCGAAAAAGGCCGCAAGG TTTC CCCTGCGGCCTGGTTCGG GCGCATGTTGCCATT TERM 4851 3688964 - 3688987 + F 83 -13.8 -2.71144 | opp_overlap 3688956 3688964, overlap 3688981 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG TERM 4852 3688987 - 3688964 - f 100 -16 -4.82855 | opp_overlap 3688964 3688981, overlap 3688956 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG TERM 4853 3689208 - 3689250 + F 80 -6.9 -4.60797 | gap 1, opp_overlap 3689207 TTGGGTTCAAGTTAG CCCCCGTCAGGTTGCCAAGT TTAT ACCAGTCAACGTG-CGGGGG TTTTCTCTATCCAGC TERM 4854 3689733 - 3689767 + F 95 -13 -4.07568 | opp_overlap 3689721 3689726 GCACTATAGCCTGGT TATAGGCAGCATTCTT TAT GAGAGAGCTGCCTATA TTTTGGGCAGGGGGC yhjV 3689786 - 3691084 + | putative amino acid permease dppF 3692198 - 3691185 - | dipeptide transport ATP-binding protein DppF dppD 3693178 - 3692195 - | dipeptide transport ATP-binding protein DppD dppC 3694091 - 3693189 - | dipeptide transport system permease protein DppC TERM 4855 3693609 - 3693585 - G 71 -8.5 -3.87815 | CGGCAGCGCCACAAA CGTCAACGCCA GCG CAGCGTTGCCG ATGGAGGGGCCGAAG dppB 3695120 - 3694101 - | dipeptide transport system permease protein DppB TERM 4856 3695258 - 3695270 + r 80 -6.9 -4.56133 | GCCTACACAACACCG GGGCG CAG CGCTC TTTTAATTATTCGAC dppA 3696833 - 3695277 - | periplasmic dipeptide transport protein precursor TERM 4857 3696030 - 3696042 + g 90 -6.3 -5.23765 | overlap 3696023 CAGACCGGCCTGCTC CATCA GGT TGATG TTTTTATCTTCTTTC TERM 4858 3696492 - 3696504 + g 74 -3.3 -4.84359 | AGACACTTTATGGTA CGGGT TCT GCTCG TTTTTCTGCCGGTCA TERM 4859 3696656 - 3696679 + g 84 -8.8 -4.27316 | opp_overlap 3696653 3696655 ACTTCTCAGCAAGAC CCGGGATCAC TTCC GTGGTGCCGG TTTTGAATTCAACCA TERM 4860 3697425 - 3697405 - R 95 -12.6 -4.00411 | CAAAATTGTAAATAA GTAGGCCG TCGTG CGGCCTAC CGCGATCACAAAAAC SEN3455 3698765 - 3697440 - | putative xanthine permease TERM 4861 3698068 - 3698057 - G 83 -5.8 -4.84527 | CGGAGAGATCAAAAA TCGG CCAG CCGA ACGGCAAAAGCTGTG TERM 4862 3698819 - 3698794 - R 100 -11.1 -5.69023 | opp_overlap 3698793 3698792 3698795, overlap 3698797 AAAACATCAAAAAAA TAACCGCCAGC GCGG GCTGGCGGTCT GCATTATTTCAACCA TERM 4863 3698795 - 3698818 + r 78 -12.4 -2.71101 | opp_overlap 3698794 3698797, overlap 3698793 3698792 AAACATCAAAAAAAT AACCGCCAGC GCGG GCTGGCGGTC TGCATTATTTCAACC TERM 4864 3698816 - 3698797 - R 100 -15 -4.86226 | opp_overlap 3698795 3698793 3698792, overlap 3698794 ACATCAAAAAAATAA CCGCCAGC GCGG GCTGGCGG TCTGCATTATTTCAA SEN3456 3699947 - 3698823 - | hypothetical protein TERM 4865 3699822 - 3699835 + g 71 -9.5 -3.53012 | opp_overlap 3699822 3699821 GTCCACCAGGTAAAC CCGCC CTTC GGCGG TTTGCGGCGCAAAAA TERM 4866 3700417 - 3700406 - g 75 -5.8 -4.56775 | opp_overlap 3700406 3700405 ATGGCGCTGGAAAAA CAGC ATGC GCTG ATTCTGGTGCCGCCG TERM 4867 3700863 - 3700875 + G 86 -10.5 -4.07568 | ACACCTTTGCCAGCG GCGCG GTA CGCGC TTTTCAGGAACAAGA TERM 4868 3700928 - 3700911 - g 70 -6.9 -4.19678 | opp_overlap 3700912, overlap 3700912 CCATACCTGAACAAA TGCGGGT GGTC ACCCGCT ATGATGGTATCCGCG SEN3457 3700097 - 3701104 + | putative lacI-family transcriptional regulator TERM 4869 3701130 - 3701145 + T 72 -9 -3.55368 | CTTGCCACTGCGGGC CGTTGC TGAC GCAACG TTCTCTCGCTTCGCT TERM 4870 3701221 - 3701239 + T 79 -8.8 -4.03204 | opp_overlap 3701222, overlap 3701222 TCAGATACAAAAAAA ACCTGCTC GCT GAGCAGGG TTTCTGAATTTGGTC TERM 4871 3701222 - 3701238 + T 80 -12.3 -3.01199 | opp_overlap 3701222, overlap 3701221 CAGATACAAAAAAAA CCTGCTC GCT GAGCAGG GTTTCTGAATTTGGT TERM 4872 3701238 - 3701222 - T 100 -12.3 -6.06529 | opp_overlap 3701222 3701221 CAGATACAAAAAAAA CCTGCTC GCT GAGCAGG GTTTCTGAATTTGGT TERM 4873 3701282 - 3701300 + T 74 -10.2 -3.14211 | overlap 3701299 TGACTCGCCACTGCG TGGCTCGC CCT GCGGGCCG TTGCTGACGCAACGT TERM 4874 3701299 - 3701314 + T 72 -9 -3.55368 | overlap 3701282 GCTCGCCCTGCGGGC CGTTGC TGAC GCAACG TTCTCTCGCTTCGCT TERM 4875 3701408 - 3701390 - T 100 -14.6 -5.76633 | opp_overlap 3701390 TCAGATACAAAAAAA CCCTGCTC ATT GAGCAGGG TTTCTGAATTTGGTC TERM 4876 3701390 - 3701408 + T 100 -14.6 -4.03204 | opp_overlap 3701390 TCAGATACAAAAAAA CCCTGCTC ATT GAGCAGGG TTTCTGAATTTGGTC yhjW 3703277 - 3701586 - | hypothetical protein TERM 4877 3703487 - 3703470 - R 100 -12.7 -4.49644 | opp_overlap 3703481 ACTAAAAATGGAAAA GGGCCAG CGAA CTGGCCC TCAGTGATTATTCGT lpfE 3704022 - 3703495 - | fimbrial protein (LpfE) lpfD 3705107 - 3704028 - | fimbrial protein (LpfD) lpfC 3707653 - 3705125 - | outer membrane usher protein (LpfC) TERM 4878 3707687 - 3707672 - R 79 -9 -4.12599 | opp_overlap 3707671 AATAATCCTTTAAAA CGCGTT AGTT AACGCG CTGTGTCAACATGTC lpfB 3708374 - 3707676 - | fimbrial chaperone protein (LpfB) TERM 4879 3707795 - 3707809 + g 80 -4.2 -5.1287 | overlap 3707797 TCAATGAGCCTTTTG CCGGAA CCA TTCCCG TTTTTTCAATATCAC TERM 4880 3707983 - 3708003 + g 86 -7.5 -4.74103 | AGTTTTAAGCGGGTA CGTACGGCG ATC TGCAGTACG TTTTTAGCTTCCGCG TERM 4881 3708428 - 3708406 - R 100 -13.5 -5.00616 | opp_overlap 3708400 3708406 CTCCGCTGGAAAAAA TGGCAACGG GATTT CCGTTGCCA TTATGATTGTCTGTA TERM 4882 3708406 - 3708428 + r 93 -14.2 -3.60094 | opp_overlap 3708406, overlap 3708400 CTCCGCTGGAAAAAA TGGCAACGGG ATT TCCGTTGCCA TTATGATTGTCTGTA lpfA 3708995 - 3708459 - | long polar fimbria protein A (LpfA) TERM 4883 3708492 - 3708518 + g 87 -8 -4.63932 | overlap 3708488 3708494 GAAGTCCACTTCTGC GTTACCGTAACC AGT GGTTACAGTATC TTTTGTTGCAACGTA TERM 4884 3708494 - 3708516 + g 76 -9.2 -3.93367 | overlap 3708488 3708492 AGTCCACTTCTGCGT TACCGTAACC AGT GGTTACAGTA TCTTTTGTTGCAACG TERM 4885 3709320 - 3709302 - R 100 -5.9 -6.23545 | overlap 3709304 GCTAAATAAAAAAAA GGGCACC AAATG GGTGCGC TGTACGCCTGGTGTT yhjY 3710205 - 3709501 - | putative lipoprotein TERM 4886 3710163 - 3710140 - G 100 -8 -5.28176 | overlap 3710143 3710154 3710155 GGTATTGATAAAAAA CGAGCAGGCC ATAA GGCCCGCCAG ACAACACAACGTCCG TERM 4887 3710160 - 3710143 - G 73 -10.5 -3.45403 | overlap 3710140 3710154 3710155 ATTGATAAAAAACGA GCAGGCC ATAA GGCCCGC CAGACAACACAACGT TERM 4888 3710684 - 3710702 + G 78 -6.6 -4.59027 | opp_overlap 3710685, overlap 3710685 TTGCGATGGAGCAAA ACGGCGAG TCT TTCGCCGA TTTTGTCTGGTCATT TERM 4889 3710685 - 3710701 + G 70 -10.1 -3.34332 | opp_overlap 3710685, overlap 3710684 TGCGATGGAGCAAAA CGGCGAG TCT TTCGCCG ATTTTGTCTGGTCAT TERM 4890 3710701 - 3710685 - g 84 -9.4 -4.2828 | opp_overlap 3710685 3710684 TGCGATGGAGCAAAA CGGCGA GTCTT TCGCCG ATTTTGTCTGGTCAT tag 3710362 - 3710943 + | 3-methyladenine DNA glycosylase I, constitutive yiaC 3710921 - 3711361 + | putative acetyltransferase bisC 3713663 - 3711330 - | biotin sulfoxide reductase yiaD 3713849 - 3714478 + | putative outer membrane protein TERM 4891 3714653 - 3714675 + F 77 -6.9 -4.54727 | TAATAAGCCTGTTCC GGTTGGCGC ATGCC GCGCTTACC TTTTGATTTACGGAG TERM 4892 3714906 - 3714887 - g 82 -5.6 -5.00616 | gap 1, overlap 3714888 CGCTGCTGGAAAAAA TGCCG-GCG CTA CGCGCGGCG TCAACCATCTCGGTG yiaE 3714697 - 3715671 + | putative 2-hydroxyacid dehydrogenase yiaF 3716431 - 3715721 - | lipoprotein TERM 4893 3715943 - 3715915 - G 70 -9.6 -3.34517 | gap 1, opp_overlap 3715920, overlap 3715913 ACTGCTGCGTAAAGA TCTGC-GCCGCCG GGAT CAGCGGCTGCAAA GCATCTGCCGGCACG TERM 4894 3716645 - 3716623 - H 79 -4.1 -5.252 | gap 1 CACTGCGATAAAAAA CGC-GGCAAG AAAG CTTTCCAGCG GGGGATGTAATATTT yiaG 3716870 - 3717160 + | putative HTH-type transcriptional regulator TERM 4895 3717154 - 3717170 + F 70 -5.1 -4.45168 | opp_overlap 3717153 AAGTAAGCAATTGAT GGAGTAA TTT TTACCCC TTTCTGTTTTAACGG TERM 4896 3717183 - 3717201 + F 87 -10.3 -4.07687 | CCCTTTCTGTTTTAA CGGTCCT GCGCA AGGACCG TTTTCCCCGCCCGAT cspA 3717448 - 3717660 + | cold shock protein TERM 4897 3717685 - 3717704 + F 100 -11.4 -6.09888 | GCTCAGAATTTTGAA TCCCTGCC TGAT GGCGGGGA TTTTTTTTATTCCAA SEN3473 3717834 - 3718373 + | hypothetical protein TERM 4898 3718406 - 3718378 - T 100 -8.9 -5.06451 | opp_overlap 3718380, overlap 3718379 CATTACGTTAAAAAA TGCCCGATAAC ATAATGG GTTATCGGGCC TATAAAACGCCAACA TERM 4899 3718405 - 3718379 - T 88 -12.4 -3.63148 | opp_overlap 3718380, overlap 3718378 ATTACGTTAAAAAAT GCCCGATAAC ATAATGG GTTATCGGGC CTATAAAACGCCAAC TERM 4900 3718536 - 3718558 + T 93 -7 -5.72622 | opp_overlap 3718536 GAGGCATCAGCGAAA GAGTCCATTT AAT ACATGGGCTC TTTTTTGTTTCTGGC SEN3474 3719229 - 3718744 - | putative acetyltransferase SEN3475 3719504 - 3719217 - | hypothetical protein SEN3476 3720149 - 3719682 - | putative acetyltransferase SEN3476A 3720512 - 3720321 - | transposase TERM 4901 3721064 - 3721091 + r 77 -7.1 -4.46112 | opp_overlap 3721053 3721070, overlap 3721070 ACTATTTATGTTATA AAAAAACCTGC CCGAGA GCAGGTTTTTG TTTATTTAACTGAAC TERM 4902 3721070 - 3721085 + r 91 -6.1 -5.5454 | opp_overlap 3721070, overlap 3721064 TATGTTATAAAAAAA CCTGC CCGAGA GCAGG TTTTTGTTTATTTAA TERM 4903 3721085 - 3721070 - R 91 -6.8 -5.626 | opp_overlap 3721070 3721064 TATGTTATAAAAAAA CCTGCC CGAG AGCAGG TTTTTGTTTATTTAA glyS 3723178 - 3721109 - | glycine-tRNA synthetase, beta subunit TERM 4904 3722619 - 3722609 - G 71 -8.2 -3.91897 | CGGCTCACCCATAAA GCGG TGG CCGC GAATGACGCGGTCAG glyQ 3724099 - 3723188 - | glycine-tRNA synthetase, alpha subunit TERM 4905 3723365 - 3723415 + g 74 -4.5 -4.78107 | gap 1, overlap 3723394 3723397 TTTCAGAATACGCTC GTAGGCCGGCAGCGGCAGCGGGTT TTCC AGCGC-CAGCAGCTGCTGGGCTTC TTTTTCATACTGCTC TERM 4906 3723394 - 3723412 + g 75 -6.7 -4.49314 | gap 1, overlap 3723365 3723397 GCAGCGGGTTTTCCA GCGCCAGC AGCT GCTGG-GC TTCTTTTTCATACTG TERM 4907 3723713 - 3723731 + g 77 -8 -4.16251 | TTCCCAGCCGAGTCC CCAGGCGC CCA GCGTCGGG TTTTCCCAGTTATCT TERM 4908 3724286 - 3724262 - R 82 -7.1 -4.7889 | AGAAAGATGTAAAAA CTGCCCATCTG CAT CAAAAGAGCAG ACAAAACTCTCTTTA SEN3479 3724540 - 3724238 - | putative lipoprotein TERM 4909 3724913 - 3724929 + G 80 -4.4 -5.1287 | gap 1, overlap 3724911 TTTTTTGGCGAGCGC TG-CGCG CAAC CGCGGCA TTTTTTACGTATCGC yiaH 3724706 - 3725701 + | hypothetical protein TERM 4910 3725726 - 3725709 - T 75 -9.9 -3.61609 | opp_overlap 3725709, overlap 3725703 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA TERM 4911 3725709 - 3725726 + T 71 -9.9 -3.22774 | opp_overlap 3725709 3725703 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA yiaB 3726077 - 3725724 - | hypothetical protein TERM 4912 3726219 - 3726244 + r 86 -13.4 -3.45054 | opp_overlap 3726219 AATATTTACGGGAAA TGCCTTTCGG CCAAAA CCGAAAGGCA TTCTGACTTATGACA TERM 4913 3726244 - 3726219 - R 93 -14.1 -3.61922 | opp_overlap 3726219 AATATTTACGGGAAA TGCCTTTCGGC CAAA ACCGAAAGGCA TTCTGACTTATGACA xylB 3727706 - 3726252 - | xylulose kinase TERM 4914 3726926 - 3726912 - G 82 -11.4 -3.91897 | CGGTTTACTCAGAAA GCCGTC GCT GACGGC AAAATAGACGCCCGA xylA 3729128 - 3727806 - | D-xylose isomerase xylR 3729491 - 3730669 + | xylose operon regulatory protein bax 3731554 - 3730730 - | putative exported amidase TERM 4915 3732102 - 3732117 + G 73 -6.1 -4.42806 | AACCCTGCGAAGGCG CGCCA CCGCAA TGGCG TTTGTTTAAAGATGG malS 3731870 - 3733897 + | alpha-amylase TERM 4916 3734261 - 3734249 - g 80 -10.5 -3.91858 | opp_overlap 3734253 CAGATATGGTAGAAA GCGGC AAA GCCGC TGATGCGCTTTGTAA avtA 3734071 - 3735321 + | valine--pyruvate aminotransferase ysaA 3735831 - 3735358 - | putative electron-transport protein yiaJ 3736748 - 3735948 - | putative transcriptional regulator yiaK 3736978 - 3737976 + | putative carboxylic acid dehydrogenase yiaL 3737988 - 3738452 + | hypothetical protein TERM 4917 3738597 - 3738609 + G 70 -9.1 -3.67052 | CTCCGGATATCCGGG GGCTG GAG CAGCC TTGTCTTGAACATCT TERM 4918 3738629 - 3738646 + G 70 -9.1 -3.62597 | opp_overlap 3738622 CTTGAACATCTTCAC CCGCTCG GCGA CGAGTGG TTATTGCGCCATACA TERM 4919 3738709 - 3738729 + G 86 -9.7 -4.2803 | AATGGAAACCATGCG CCGCCGT AGCGAAA ACGGCGG TTTTGGATTAGCGTC SEN3492 3738476 - 3739408 + | hypothetical protein yiaM 3739547 - 3740020 + | hypothetical protein yiaN 3740023 - 3741300 + | hypothetical protein yiaO 3741312 - 3742298 + | putative periplasmic protein TERM 4920 3742748 - 3742796 + G 91 -17 -2.71144 | opp_overlap 3742761, overlap 3742761 GAATGAGCCGCAGCG CTACGCGCAGATAGGCA-GCGTCA TGA TGACGCATGACTATCTGCGC-TGG TGCTTAACCGGCGTG TERM 4921 3743277 - 3743312 + G 90 -5.3 -5.28826 | gap 1, opp_overlap 3743274 3743273 3743276 3743298, overlap 3743279 GACGAGATCAACCAG GCGGTCGCCAGCCTGC CGAAA GCCGG-TAGCGACCTC TTTTTTCTGCCGTTT TERM 4922 3743279 - 3743310 + G 74 -6.5 -4.26475 | gap 1, opp_overlap 3743274 3743273 3743276 3743298, overlap 3743277 CGAGATCAACCAGGC GGTCGCCAGCCTGC CGAAA GCCGG-TAGCGACC TCTTTTTTCTGCCGT lyxK 3742302 - 3743798 + | putative L-xylulose kinase sgbH 3743795 - 3744457 + | putative hexulose-6-phosphate synthase sgbU 3744450 - 3745310 + | putative sugar-phosphate isomerase sgbE 3745304 - 3745999 + | putative sugar isomerase SEN3500 3746975 - 3746160 - | putative transcriptional regulator TERM 4923 3746567 - 3746592 + g 71 -6 -4.33105 | opp_overlap 3746568, overlap 3746568 3746570 TCAGCAGCACGATGA ACTCCAGCGC CGGGCT GCGCTGGTGC TTTTCCTGCTCGTTC TERM 4924 3746636 - 3746624 - G 75 -6.2 -4.60924 | overlap 3746625 TAAACTGGCGAAAAA GCGC AATCA GCGC CTGCGGATCGGCAAC TERM 4925 3747940 - 3747926 - g 70 -3.4 -4.8083 | GAAGAGTACGAAAAA CGCGGC CAG ACCTCG TACTGGCATACCTAC SEN3501 3747239 - 3749194 + | hypothetical protein aldB 3750850 - 3749312 - | aldehyde dehydrogenase B SEN3503 3751019 - 3751900 + | putative sugar kinase TERM 4926 3752121 - 3752101 - T 89 -4.7 -5.69262 | opp_overlap 3752106, overlap 3752105 3752106 CCAGAAAAATAAAAA GCAACGCAA TAA TTGTATTGC TTCATTTGTTATTTA selB 3753998 - 3752148 - | selenocysteine-specific elongation factor TERM 4927 3752351 - 3752372 + g 74 -7.3 -4.13945 | CGAAAGCGACAATCC GATCGTTAC GATA GTACCGATC TTTTACGATCGCGGT selA 3755386 - 3753995 - | L-seryl-tRNA(Ser) selenium transferase yibF 3756093 - 3755485 - | putative glutathione transferase TERM 4928 3756307 - 3756292 - H 86 -4 -5.50723 | GCACCAAAATAAAAA TGTGAA ATAT CTCACA TAAAATGGTCTTTTA mtlA 3756569 - 3758485 + | mannitol-specific enzyme II of phosphotransferase system TERM 4929 3759089 - 3759071 - g 74 -7.4 -4.07885 | overlap 3759073 CATCGCCTGTGAAAA CATGGTGC GCG GCACCACA CAGCTGAAAGGCCAC TERM 4930 3759087 - 3759073 - g 74 -10 -3.63744 | overlap 3759071 TCGCCTGTGAAAACA TGGTGC GCG GCACCA CACAGCTGAAAGGCC TERM 4931 3759773 - 3759762 - g 86 -7.2 -4.68593 | overlap 3759763 CTGATTACCGAAAAA GGCC CGCA GGCC GCGCTGGCGCAAATT mtlD 3758706 - 3759854 + | mannitol-1-phosphate dehydrogenase TERM 4932 3759887 - 3759862 - g 75 -11.1 -3.41053 | overlap 3759855 CCAAATGACGCAGAA TCCGGCGCAGG TTAG CCTGCGCCCAA ATAACAGATTGTCAG mtlR 3759851 - 3760441 + | mannitol operon repressor (mannitol repressor protein) SEN3510 3760660 - 3760451 - | hypothetical protein yibL 3760951 - 3761313 + | hypothetical protein TERM 4933 3762044 - 3762025 - g 76 -3.4 -4.99056 | opp_overlap 3762035, overlap 3762035 CAACACAACCAAAAA GGTCACCG AAGT CGTTGGCC GCGTTGAACGCAAAC TERM 4934 3762289 - 3762260 - g 81 -3.5 -5.14563 | gap 1, overlap 3762261 TGGGGTACGAAAAAA CCTTCCGAGGCAAA AGA TCTGCCTCGCT-GG AAACAACTCCTGCTC TERM 4935 3762384 - 3762374 - g 83 -8.2 -4.43012 | ACGCTAACATTAAAA GGCG TAT CGCC CAATAATCTTAAGTA SEN3512 3761801 - 3762484 + | putative lipoprotein SEN3513 3762528 - 3766913 + | hypothetical protein TERM 4936 3766963 - 3766941 - f 100 -16.4 -3.83205 | opp_overlap 3766941 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT TERM 4937 3766941 - 3766963 + F 100 -16.4 -4.30448 | opp_overlap 3766941 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT TERM 4938 3767730 - 3767703 - g 74 -10.6 -3.59979 | opp_overlap 3767729 GTGCCTGATTGTAAA CACCGCGCCA GTCGCCTT TGGCGCGATG GGGATCCCGATTCTG lldP 3767212 - 3768867 + | L-lactate permease lldR 3768864 - 3769640 + | putative L-lactate dehydrogenase operon regulator lldD 3769637 - 3770827 + | putative L-lactate dehydrogenase yibK 3770893 - 3771366 + | putative RNA-methyltransferase SEN3518 3772438 - 3771434 - | putative lacI family transcriptional regulator regulator TERM 4939 3771915 - 3771928 + g 72 -3.8 -4.72272 | AAAAGATACTCCCCC GTCG CCTGCC CGAC TTTTTCATGGGAAAA SEN3519 3772756 - 3773952 + | putative racemase TERM 4940 3773960 - 3773978 + F 79 -11.7 -3.1352 | overlap 3773956 GCCCTTAACCCGACT GGCGGGA ATCCG TCCCGCC TCTCTTACCTTACAG TERM 4941 3774058 - 3774043 - g 71 -4.6 -4.57503 | overlap 3774044 GAACACAATAATAAA GCGCAC AAAA GTGCGT CATACCATTCTTATA SEN3520 3774026 - 3775336 + | probable glucarate transporter TERM 4942 3775363 - 3775396 + T 100 -8.3 -5.32944 | gap 2 GCGAATTCTTCGCTC CGCTGTTCCG--GGA TTGCAC TCCATCGGAACAGCG TTTTTTAGTTGTACC cysE 3776240 - 3775419 - | serine acetyltransferase TERM 4943 3776294 - 3776265 - R 90 -10.1 -4.39426 | gap 1, opp_overlap 3776265, overlap 3776268 CAGACGGGCAGAAAA CGA-CCAACCCG TTCTGTG CGGGTTGGGTCG TTTATGCAAACAGTT TERM 4944 3776265 - 3776294 + r 84 -10.8 -3.86194 | gap 1, opp_overlap 3776265 3776268 CAGACGGGCAGAAAA CGA-CCAACCCGT TCTGT GCGGGTTGGGTCG TTTATGCAAACAGTT TERM 4945 3776290 - 3776268 - R 74 -10.6 -3.17598 | opp_overlap 3776265, overlap 3776265 ACGGGCAGAAAACGA CCAACCCG TTCTGTG CGGGTTGG GTCGTTTATGCAAAC gpsA 3777337 - 3776318 - | glycerol-3-phosphate dehydrogenase TERM 4946 3776629 - 3776604 - G 71 -9.7 -3.56821 | gap 1, overlap 3776621 ACCAGATCGCCTAAA CCCGCCATCCCC ATA AAGG-TGGCGGG ATCGGCACCAAGCGC TERM 4947 3777335 - 3777351 + g 76 -10.9 -3.69283 | overlap 3777346 CGCATTACTTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3777804 - 3777337 - | protein-export protein SecB grxC 3778099 - 3777848 - | glutaredoxin 3 yibN 3778617 - 3778186 - | putative secreted protein TERM 4948 3778357 - 3778371 + g 83 -10 -4.08485 | GTGCTTTTCCAGTTC GCCAAC ATT GTTGGC TTTGATTTCGCTCGG TERM 4949 3779383 - 3779410 + G 71 -11.2 -2.95476 | gap 1, opp_overlap 3779371 3779381 3779382 3779400, overlap 3779400 ATTCGAAGACAAATT CGCCGCGCTGGGC AAA GGCC-GCGTGGCG TCTATCGTCGGTCGT pmgI 3778865 - 3780409 + | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TERM 4950 3780491 - 3780517 + G 100 -14.5 -3.81022 | overlap 3780512 GTCAGGCCTTTGTTC TACGCCAGCGT ACTTA GCGCTGGCGTA TTGTTGTGCGCCTTT TERM 4951 3781617 - 3781640 + G 73 -5.9 -4.43877 | opp_overlap 3781595 CCCTTGTGGGCAGTA GCGGCGGTC AGGGCA GACCTTCGC TTTATTTCGAAATTC yibP 3780419 - 3781702 + | hypothetical protein TERM 4952 3781838 - 3781828 - g 74 -6.8 -4.2349 | overlap 3781831 CCCGCACACGGAAAA CCAG GTT CTGG CGCTGCCGCCAAACA TERM 4953 3782534 - 3782522 - g 76 -3.3 -5.09426 | TGCAAGCCGAAAAAA CCGCT GCA ACCGG TCTACGCTACGCGCT yigQ 3781706 - 3782668 + | hypothetical protein yibD 3783689 - 3782655 - | putative glycosyltransferase TERM 4954 3783434 - 3783420 - G 71 -7.8 -3.92075 | opp_overlap 3783421 ATCTGCATCGACAAA GGCGAC ATA ATCGCC GGTCGCTGCTTGCAG TERM 4955 3783927 - 3783907 - R 100 -9 -5.4505 | opp_overlap 3783907 TTCCCTAACAAAAAA GGTTGGCG AATGA CACCAACC TTTTACGATGAAACG TERM 4956 3783907 - 3783927 + r 71 -6.8 -4.13767 | opp_overlap 3783907 TTCCCTAACAAAAAA GGTTGGCG AATGA CACCAACC TTTTACGATGAAACG TERM 4957 3783980 - 3783941 - R 76 -8.8 -3.78775 | gap 1, opp_overlap 3783941 3783950 3783952, overlap 3783942 3783950 3783952 CCTTTTACGATGAAA CGTATATCAGACCCGATAA ATA TCATCGGGTCTC-TATACA TATTAATCCCAGCTC TERM 4958 3783972 - 3783950 - R 78 -12.8 -2.68799 | opp_overlap 3783941 3783950 378395