TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.541353 %AT, 4212642 nt, 31137 terms. Intergenic: 0.606047 %AT, H2T: 580501 nt, 5398 terms; T2T: 191934 nt, 4699 terms; H2H: 237888 nt, 3535 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|157959830|ref|NC_009901.1| Shewanella pealeana ATCC 700345, complete genome (length 5174581) Spea_0001 223 - 1608 + | chromosomal replication initiation protein Spea_0002 1628 - 2728 + | DNA polymerase III, beta subunit Spea_0003 2849 - 3931 + | DNA replication and repair protein RecF TERM 1 4676 - 4662 - g 70 -5 -4.43208 | ACACCGGTAAACAAA GAAGTA TTC CACTTC TGTCAAGAGCGTGAA Spea_0004 3924 - 6365 + | DNA gyrase, B subunit TERM 2 6403 - 6421 + F 100 -11 -6.09888 | opp_overlap 6403 AATAATTGAGTAAAA TCGGTGCT ATA GGCACCGA TTTTTTTTGTTAACA TERM 3 6421 - 6403 - f 90 -10.3 -4.32651 | opp_overlap 6403 AATAATTGAGTAAAA TCGGTGC TATAG GCACCGA TTTTTTTTGTTAACA TERM 4 7480 - 7500 + G 75 -6.1 -4.42851 | opp_overlap 7481, overlap 7481 7486 GAAACCTTTGAGCAA ATGCATCAG AAG CTGGTGCAG TTTTAGCTTTATTCA Spea_0005 6442 - 7506 + | metal dependent phosphohydrolase TERM 5 7481 - 7499 + T 73 -9.6 -3.24626 | opp_overlap 7481, overlap 7480 7486 AAACCTTTGAGCAAA TGCATCAG AAG CTGGTGCA GTTTTAGCTTTATTC TERM 6 7562 - 7532 - T 83 -12.1 -3.16421 | gap 1, opp_overlap 7533 7540, overlap 7540 CTAATAACTACTCAA TAAAAAAACGCGCC AAAT GGCGCGTTTTTT-A TGATTCATCGATTCA TERM 7 7533 - 7562 + T 91 -13.7 -2.8007 | opp_overlap 7532 7540, overlap 7540 TAATAACTACTCAAT AAAAAAACGCGCC AAAT GGCGCGTTTTTTA TGATTCATCGATTCA TERM 8 7555 - 7540 - T 100 -11.8 -5.8187 | opp_overlap 7533 7540, overlap 7532 TACTCAATAAAAAAA CGCGCC AAAT GGCGCG TTTTTTATGATTCAT TERM 9 7540 - 7555 + T 100 -11.8 -5.38249 | opp_overlap 7540 7532, overlap 7533 TACTCAATAAAAAAA CGCGCC AAAT GGCGCG TTTTTTATGATTCAT Spea_0006 9651 - 7582 - | glycyl-tRNA synthetase subunit beta Spea_0007 10526 - 9663 - | glycyl-tRNA synthetase subunit alpha TERM 10 9815 - 9848 + g 76 -11.9 -2.74784 | overlap 9808 9811 TAAATGCATGAGAGG CTTTCATTACTTGCT CATA AGCAGGTAGTGGAAG TGGCTTTTCAAGCGT Spea_0008 10686 - 11246 + | DNA-3-methyladenine glycosylase I Spea_0009 11930 - 11265 - | hypothetical protein TERM 11 12024 - 12045 + r 82 -8.7 -4.208 | opp_overlap 12024, overlap 12017 TTTGTTCATAAAAAA GGATGTTCC ACGT GGAACACCC TTTGTAGTTTTACAC TERM 12 12045 - 12024 - R 100 -10.9 -5.24129 | opp_overlap 12024 12017 TTTGTTCATAAAAAA GGATGTTCC ACGT GGAACACCC TTTGTAGTTTTACAC Spea_0010 15360 - 12160 - | amidohydrolase TERM 13 13397 - 13422 + g 78 -6.1 -4.65895 | opp_overlap 13397 13396, overlap 13402 TTGCCACCAACAAAG GCAATTGTTCC ACGT GGAACATCTGC TTTTTGAGTGAAACC TERM 14 13490 - 13510 + g 77 -11.3 -3.20723 | GCGTCTTCAGCCTGT TGTTGATAC TGG GTATCAACA TTCACTTGATAAAGC Spea_0011 16142 - 15705 - | hypothetical protein Spea_0012 16422 - 16177 - | SirA family protein TERM 15 16515 - 16566 + r 89 -11.8 -3.67112 | overlap 16516 ATTTGTGAGCTTGGG TCATTTGGTTATTTGCAGTGTTCC ACGT GGAACACTGCAAATGAATAGACGG TTATTCGGCTGTGAT TERM 16 16516 - 16565 + r 90 -13.1 -2.79785 | overlap 16515 TTTGTGAGCTTGGGT CATTTGGTTATTTGCAGTGTTCC ACGT GGAACACTGCAAATGAATAGACG GTTATTCGGCTGTGA Spea_0013 17037 - 16567 - | ybaK/ebsC protein TERM 17 16778 - 16794 + g 79 -4.3 -5.22039 | overlap 16770 CGCTGTACTTCCATG GCTTCGG CCA TCGCAGC TTTTTTGGCTTTGGC Spea_0014 17557 - 17096 - | GCN5-related N-acetyltransferase TERM 18 17683 - 17706 + r 100 -13.2 -5.27923 | opp_overlap 17685 TGACGGTTTTTACTA GACCAGTAGC TTCT GCTGCTGGTC TTTTTTATGCACTTG Spea_0015 18432 - 17680 - | integrase catalytic region TERM 19 17789 - 17778 - G 72 -3 -4.9792 | CATTGTATATAAAAA TTGA CTCC TCAA CGAGTTGCTTTAACT TERM 20 18176 - 18163 - G 72 -6.7 -4.28111 | opp_overlap 18162 TATATCACTAACAAA CACCT CTTC AGGTG CTGTTGGCACTAACT Spea_0016 18914 - 18516 - | transposase TERM 21 18949 - 18921 - R 86 -9.8 -3.97947 | gap 1, opp_overlap 18929 TGTAGTCATTATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACACTGAACACA TERM 22 18970 - 18985 + r 80 -10.4 -3.72756 | opp_overlap 18970 ACTGAACACAAAAAA GCCAGC TTGC GCTGGC TTCTATCTATTATTA TERM 23 18985 - 18970 - R 100 -10.4 -5.48063 | opp_overlap 18970 ACTGAACACAAAAAA GCCAGC TTGC GCTGGC TTCTATCTATTATTA Spea_0017 20172 - 19009 - | 3-ketoacyl-CoA thiolase TERM 24 19393 - 19407 + g 73 -4.2 -4.88228 | opp_overlap 19386 GGCACGAATAGGCAG GCCTAA CGC TTTGGC TTTTTCCTCTTCCAT Spea_0018 22344 - 20191 - | multifunctional fatty acid oxidation complex subunit alpha Spea_0019 22709 - 24031 + | proline dipeptidase TERM 25 24123 - 24098 - g 87 -11.3 -3.8969 | opp_overlap 24098 TTATTGATAGAAGAA GAGATAAAGCA TAGT CGCTTTATCTC TTTTCTATTCCACTG TERM 26 24098 - 24123 + G 93 -10.6 -4.67608 | opp_overlap 24098 TTATTGATAGAAGAA GAGATAAAGC ATAGTC GCTTTATCTC TTTTCTATTCCACTG Spea_0020 24050 - 24664 + | hypothetical protein Spea_0021 24810 - 26267 + | TrkH family potassium uptake protein TERM 27 26291 - 26315 + F 80 -10.1 -3.70109 | overlap 26292 26295 26311 AAAAATACTGACATG GTAACGCTAAC TCA GTTAGCGTTAA TTATTAGCTAGTATA TERM 28 26292 - 26314 + F 91 -13.6 -2.81584 | overlap 26291 26295 26311 AAAATACTGACATGG TAACGCTAAC TCA GTTAGCGTTA ATTATTAGCTAGTAT TERM 29 26295 - 26311 + F 82 -10.9 -3.54902 | overlap 26292 26291 ATACTGACATGGTAA CGCTAAC TCA GTTAGCG TTAATTATTAGCTAG Spea_0022 26409 - 26936 + | protoporphyrinogen oxidase TERM 30 26950 - 26995 + F 75 -10 -3.20322 | gap 1, opp_overlap 26957 26964, overlap 26957 26964 GATCTGACTTTAAAC CCTA-AAACAAAAAAGCCTGC TCGAT GCAGGCTTTTTTGTATCTAGA TGTCTTGTCCTGAAA TERM 31 26987 - 26957 - f 100 -17.1 -4.24002 | opp_overlap 26950 26957 26964, overlap 26964 CTTTAAACCCTAAAA CAAAAAAGCCTGC TCGAT GCAGGCTTTTTTG TATCTAGATGTCTTG TERM 32 26957 - 26987 + F 100 -17.1 -2.95068 | opp_overlap 26957 26964, overlap 26950 26964 CTTTAAACCCTAAAA CAAAAAAGCCTGC TCGAT GCAGGCTTTTTTG TATCTAGATGTCTTG TERM 33 26980 - 26964 - f 100 -9.4 -5.79595 | opp_overlap 26957 26950 26964, overlap 26957 CCCTAAAACAAAAAA GCCTGC TCGAT GCAGGC TTTTTTGTATCTAGA TERM 34 26964 - 26980 + F 100 -9.4 -5.4251 | opp_overlap 26964 26957, overlap 26957 26950 CCCTAAAACAAAAAA GCCTGC TCGAT GCAGGC TTTTTTGTATCTAGA TERM 35 27002 - 27030 + F 86 -9.8 -3.97947 | gap 1, opp_overlap 27011 GTATCTAGATGTCTT GTCCTGAAATGTG TTTA CACATTT-AGGAC TTTATAATGACTACA Spea_0023 27037 - 27435 + | transposase TERM 36 27775 - 27788 + G 72 -6.7 -4.28111 | opp_overlap 27774 AGTTAGTGCCAACAG CACCT GAAG AGGTG TTTGTTAGTGATATA TERM 37 28162 - 28173 + G 72 -3 -4.9792 | AGTTAAAGCAACTCG TTGA GGAG TCAA TTTTTATATACAATG TERM 38 28268 - 28245 - g 100 -13.2 -5.27923 | opp_overlap 28247 CAAGTGCATAAAAAA GACCAGCAGC AGAA GCTACTGGTC TAGTAAAAACCGTCA Spea_0024 27519 - 28271 + | integrase catalytic region Spea_0025 28639 - 28334 - | ArsR family transcriptional regulator Spea_0026 28851 - 29390 + | protoporphyrinogen oxidase TERM 39 29399 - 29433 + T 80 -10.1 -3.63305 | opp_overlap 29400 29401 29408, overlap 29401 29408 TAAATAAGCACACCA ATCAAAAAAGCCGCA ATTAA TGCGGCTTTTTTGTG TTTGAAGCTTGTCTA TERM 40 29432 - 29400 - T 95 -13.6 -3.35778 | opp_overlap 29399 29401 29408, overlap 29401 29408 AAATAAGCACACCAA TCAAAAAAGCCGCA ATTAA TGCGGCTTTTTTGT GTTTGAAGCTTGTCT TERM 41 29401 - 29431 + T 100 -17.1 -3.39028 | opp_overlap 29400 29401 29408, overlap 29399 29408 AATAAGCACACCAAT CAAAAAAGCCGCA ATTAA TGCGGCTTTTTTG TGTTTGAAGCTTGTC TERM 42 29431 - 29401 - T 100 -17.1 -2.60382 | opp_overlap 29401 29399 29408, overlap 29400 29408 AATAAGCACACCAAT CAAAAAAGCCGCA ATTAA TGCGGCTTTTTTG TGTTTGAAGCTTGTC TERM 43 29408 - 29424 + T 100 -9.4 -5.56264 | opp_overlap 29401 29400 29408, overlap 29401 29399 ACACCAATCAAAAAA GCCGCA ATTAA TGCGGC TTTTTTGTGTTTGAA TERM 44 29424 - 29408 - T 100 -9.4 -5.31059 | opp_overlap 29408 29401 29399, overlap 29401 29400 ACACCAATCAAAAAA GCCGCA ATTAA TGCGGC TTTTTTGTGTTTGAA Spea_0027 30888 - 29446 - | TrkH family potassium uptake protein TERM 45 30750 - 30733 - G 70 -4.8 -4.55287 | overlap 30734 30735 TTGATGCATACAAAA GCTGGC TGCGCT ACCAGC AGCCAAGGAGGAGAT Spea_0028 32319 - 30910 - | potassium transporter peripheral membrane component TERM 46 31951 - 31939 - G 70 -4.7 -4.48713 | opp_overlap 31940 31941 31947, overlap 31940 31941 CTCATCAATAATAAA GCCGC CTC GCGGG CGATTGTCTGCATTT Spea_0029 33607 - 32327 - | sun protein Spea_0030 34579 - 33614 - | methionyl-tRNA formyltransferase Spea_0031 35183 - 34584 - | peptide deformylase Spea_0032 35245 - 36333 + | peptidoglycan-binding LysM TERM 47 36358 - 36386 + F 100 -11.8 -4.82901 | overlap 36359 AGTTATAGTTTTTCT TTCGATGCCATC TTGAT GATGGCATCGAC TTTTTATAAGGACAA TERM 48 36359 - 36385 + F 100 -15.3 -3.49419 | overlap 36358 GTTATAGTTTTTCTT TCGATGCCATC TTGAT GATGGCATCGA CTTTTTATAAGGACA Spea_0033 36489 - 37508 + | DNA protecting protein DprA Spea_0034 37511 - 37984 + | hypothetical protein TERM 49 38022 - 38007 - T 93 -10.4 -4.90302 | opp_overlap 38007 CATGAATAAAAGAAA GGAGGC CTAA GCCTCC TTTTTTGTGTCCGGA TERM 50 38007 - 38022 + T 100 -10.4 -5.36441 | opp_overlap 38007 CATGAATAAAAGAAA GGAGGC CTAA GCCTCC TTTTTTGTGTCCGGA Spea_0035 39811 - 38252 - | collagenase Spea_0036 40012 - 40575 + | DNA topoisomerase type IA Zn finger domain-containing protein Spea_0037 40662 - 41225 + | SUA5/yciO/yrdC domain-containing protein Spea_0038 41250 - 42164 + | coproporphyrinogen III oxidase Spea_0039 42653 - 42219 - | globin Spea_0040 42821 - 43636 + | shikimate 5-dehydrogenase Spea_0041 43660 - 43938 + | hypothetical protein Spea_0042 44525 - 43968 - | carbonic anhydrase TERM 51 45034 - 45017 - R 73 -8.5 -3.6215 | overlap 45032 TTAAGTTATTCGAAA TTGTCTC TCAC GAGACAA TCAAAAATTGACTTA TERM 52 47516 - 47504 - R 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 53 48314 - 48298 - R 86 -9.4 -4.08546 | overlap 48311 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 54 48820 - 48809 - R 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 55 50240 - 50193 - R 100 -17.2 -3.56568 | opp_overlap 50206, overlap 50184 50195 50206 TAATTATTCTCGAAA GAGAAGCGAAAAAGCCCGTTGC TAAC GCAACGGGCTTTTTCGTTTTTG TCTGGGCTCATTATT TERM 56 50238 - 50195 - R 100 -19.8 -3.35775 | opp_overlap 50206, overlap 50184 50193 50206 ATTATTCTCGAAAGA GAAGCGAAAAAGCCCGTTGC TAAC GCAACGGGCTTTTTCGTTTT TGTCTGGGCTCATTA TERM 57 50227 - 50206 - R 100 -15.9 -4.8066 | opp_overlap 50206, overlap 50195 50193 AAGAGAAGCGAAAAA GCCCGTTGC TAAC GCAACGGGC TTTTTCGTTTTTGTC TERM 58 50206 - 50227 + r 100 -15.9 -5.2197 | opp_overlap 50206 50195 50193 AAGAGAAGCGAAAAA GCCCGTTGC TAAC GCAACGGGC TTTTTCGTTTTTGTC TERM 59 53870 - 53858 - R 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 60 54668 - 54652 - R 86 -9.4 -4.08546 | overlap 54665 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 61 55174 - 55163 - R 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 62 56580 - 56535 - R 100 -14.3 -3.55444 | gap 1, opp_overlap 56546, overlap 56539 56546 TTTCCAGGCGCCAAA TAAACGATAAA-TCCCCAGCAC TTT GTGTTGGGGATTTTTTCGTTTA ACCGCTTTTGAAATA TERM 63 56576 - 56539 - R 91 -10.7 -4.42062 | gap 1, opp_overlap 56546, overlap 56535 56546 CAGGCGCCAAATAAA CGATAAA-TCCCCAGCAC TTT GTGTTGGGGATTTTTTCG TTTAACCGCTTTTGA TERM 64 56546 - 56568 + r 100 -14.2 -5.37593 | opp_overlap 56539 56535 56546 CAAATAAACGATAAA TCCCCAGCAC TTT GTGTTGGGGA TTTTTTCGTTTAACC TERM 65 56568 - 56546 - R 95 -12 -4.23391 | opp_overlap 56546, overlap 56539 56535 CAAATAAACGATAAA TCCCCAGCAC TTT GTGTTGGGGA TTTTTTCGTTTAACC TERM 66 57020 - 57033 + r 71 -5.3 -4.64144 | GGGATATTGGGCTCG CTTCT GGTT AGAAG TTTTTGAAGATTCTT TERM 67 57125 - 57108 - R 70 -8.5 -3.28924 | opp_overlap 57093 TAGCCTTCTCTACAA CCTATAC GTTC GTATAGG TCATGGAGAAAGTGA Spea_0043 59639 - 57162 - | hypothetical protein TERM 68 59289 - 59310 + g 79 -11.7 -3.21465 | overlap 59287 AAGGTCATATTCATC GTTTGCCAA TTGT TTGGCAAAC TCTTCAATTTCAATT TERM 69 59617 - 59607 - G 79 -4 -5.24531 | ATCGTTGACAAAAAA TTGA TGT TCAA GACGCAAATCTAATG Spea_0044 59967 - 59713 - | hypothetical protein Spea_0045 61265 - 59964 - | hypothetical protein TERM 70 60171 - 60190 + g 76 -2 -5.27477 | opp_overlap 60128, overlap 60172 60175 TCCTCCAAGTGCTCC ATCTTGCC AATA GGCATGAC TTTTTTGATTAGGGT Spea_0046 61701 - 62882 + | polysaccharide biosynthesis protein CapD Spea_0047 62895 - 64055 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 71 65209 - 65184 - g 72 -2.7 -5.04325 | gap 1, opp_overlap 65184 TTGAAATGATAAAAA CACTTTCATTTG AAC CAAGT-AAAGTG TTCTTCGATATCAAC Spea_0048 64064 - 65242 + | UDP-N-acetylglucosamine 2-epimerase Spea_0049 65250 - 66323 + | N-acylneuraminate-9-phosphate synthase Spea_0050 66316 - 66960 + | sialic acid biosynthesis protein NeuD Spea_0051 66980 - 68035 + | nucleotidyl transferase TERM 72 68099 - 68050 - g 74 -3.6 -4.92756 | gap 1, opp_overlap 68051 68059, overlap 68088 ATGATTAAAAATAAA CGAGTGTTAGCTCTTATTCCCGC AAGAG GTGGAAGTAAGAGGTTAC-CTCG AAAAAATATATTACC TERM 73 68688 - 68661 - g 91 -7.2 -5.45813 | gap 1, opp_overlap 68661 CATGAAAAAAGAAAA GTCAGTTGATATC GAT GATAT-AACCGAC TTTAAATTTGCAGAG Spea_0052 68035 - 68727 + | acylneuraminate cytidylyltransferase TERM 74 68743 - 68761 + T 72 -9.6 -2.94144 | opp_overlap 68743, overlap 68740 CTTTTTTAAATTAAA CCAGACTA TAT TGGTCTGG TGATTTAAGTGCCAC TERM 75 68761 - 68743 - T 73 -7.4 -4.05788 | opp_overlap 68743 68740 CTTTTTTAAATTAAA CCAGACTA TAT TGGTCTGG TGATTTAAGTGCCAC Spea_0053 69063 - 68776 - | hypothetical protein Spea_0054 69545 - 69114 - | hypothetical protein TERM 76 69336 - 69356 + g 72 -4.7 -4.56597 | overlap 69337 69338 69340 CAGCCCTATATCTTT TATATTGGC AAT GCCAATAAG TTTTTCGAACCAGCG Spea_0055 70540 - 69530 - | OmpA/MotB domain-containing protein TERM 77 70435 - 70425 - G 87 -6.8 -5.2112 | overlap 70414 AACACCATGAAAAAA GCCA TCA TGGC CAAGGTGAAATCGGC Spea_0056 71397 - 70540 - | MotA/TolQ/ExbB proton channel Spea_0057 72134 - 71412 - | flagellar biosynthesis sigma factor Spea_0058 72601 - 72146 - | flagellar basal body-associated protein FliL Spea_0059 73788 - 72616 - | flagellar hook-length control protein Spea_0060 74104 - 73781 - | hypothetical protein Spea_0061 74453 - 74073 - | flagellar protein FliS Spea_0062 75885 - 74467 - | flagellar hook-associated 2 domain-containing protein TERM 78 76159 - 76172 + r 86 -9.5 -4.09243 | opp_overlap 76159 AAACGGCAAAAAAAA GGGCC GTGA GGCCC TTTTAAAAAAGTGTG TERM 79 76172 - 76159 - R 100 -9.5 -5.82388 | opp_overlap 76159 AAACGGCAAAAAAAA GGGCC GTGA GGCCC TTTTAAAAAAGTGTG Spea_0063 77020 - 76202 - | flagellin domain-containing protein Spea_0064 78350 - 77319 - | hypothetical protein TERM 80 77473 - 77491 + g 88 -3.8 -5.69793 | overlap 77475 TTTTTAAGGCTTAAT TGCTGCAG CTG TTGCAGAA TTTTTTGTTTACTGT TERM 81 78317 - 78287 - G 71 -9.7 -3.25823 | gap 1 GTTGCTGCATACCAA CAGCTGGCGCAACC GTTG GGCTGCGCT-GCTG AACATTAAGCGTGTC Spea_0065 79286 - 78369 - | flagellar hook-associated protein 3 Spea_0066 80670 - 79297 - | flagellar hook-associated protein FlgK TERM 82 79874 - 79862 - G 72 -9.1 -3.56821 | opp_overlap 79861 79862 AGCAGAGCGCCTAAA CTGCC ACC GGCAG ATTCATCTAGCGGAA Spea_0067 81143 - 80721 - | peptidoglycan hydrolase Spea_0068 82273 - 81143 - | flagellar basal body P-ring protein Spea_0069 82985 - 82311 - | flagellar basal body L-ring protein TERM 83 82639 - 82654 + g 72 -10.4 -2.86259 | overlap 82636 82634 CTACCTAAGTTGGCT TCGCCG CTAC CGGCGA TACTGTTGTTACCTG TERM 84 82823 - 82841 + g 82 -11 -3.59979 | opp_overlap 82818 TGAGCATAAACCCAG GGCGGTAG ACG CTACCGTC TTTGGCGTCAGGCAA TERM 85 83041 - 83026 - R 90 -10.4 -4.32201 | opp_overlap 83026 83022 TGAACCAAGGGAAAA GCGCTG ATTA CAGCGC TTGATTTAGGAACTT TERM 86 83026 - 83041 + r 79 -10.4 -3.51976 | opp_overlap 83026, overlap 83022 TGAACCAAGGGAAAA GCGCTG ATTA CAGCGC TTGATTTAGGAACTT Spea_0070 83818 - 83033 - | flagellar basal-body rod protein FlgG Spea_0071 84568 - 83843 - | flagellar basal-body rod protein FlgF Spea_0072 85795 - 84587 - | flagellar hook protein FlgE TERM 87 85396 - 85409 + g 75 -6.7 -4.47551 | TTTGCACCTGTAGGT CGGTA ACAT TACCG TTTTGTAGGTTGCCT Spea_0073 86478 - 85819 - | flagellar hook capping protein Spea_0074 86897 - 86478 - | flagellar basal-body rod protein FlgC Spea_0075 87256 - 86906 - | flagellar basal body rod protein FlgB Spea_0076 87320 - 88084 + | SAF domain-containing protein TERM 88 88393 - 88413 + G 71 -10.5 -2.66326 | overlap 88390 TAAGGTTGCGCAGAT CCGTCAATC ACT GATTGATGG TAGCTTTGAGATTGA Spea_0077 88187 - 88471 + | hypothetical protein Spea_0078 88464 - 88922 + | hypothetical protein Spea_0079 89351 - 88938 - | hypothetical protein Spea_0080 90703 - 89366 - | FliI/YscN family ATPase TERM 89 90232 - 90211 - G 80 -7.1 -4.62471 | CTGAACCGGCAAAAA GGCCTAGGC GCTG GCCACGGCC GATAGGGAGTAGGGC TERM 90 90506 - 90538 + g 73 -7.8 -4.06419 | opp_overlap 90515 TAAGCATAGGGTGTC TTTGTAGAAGCCAA CGACT TCGGCTTCTACCAA TTGTTTATCACGACA Spea_0081 91436 - 90681 - | flagellar assembly protein H Spea_0082 92449 - 91436 - | flagellar motor switch protein G Spea_0083 94210 - 92510 - | flagellar MS-ring protein Spea_0084 94624 - 94286 - | flagellar hook-basal body complex subunit FliE Spea_0085 95962 - 94655 - | sigma-54 dependent trancsriptional regulator Spea_0086 96860 - 95949 - | OmpA/MotB domain-containing protein TERM 91 97204 - 97188 - H 71 -3.8 -4.88405 | AAGGTTGAAATAAAA TTTAAG TTTTT CTTAAA ATTGCCGCTTTATAG Spea_0087 97405 - 98286 + | hypothetical protein Spea_0088 98279 - 98635 + | flagellar motor switch protein FliN Spea_0089 98638 - 99366 + | flagellar biosynthesis protein FliP Spea_0090 99553 - 99822 + | flagellar biosynthetic protein FliQ TERM 92 100069 - 100051 - g 74 -11 -2.77523 | opp_overlap 100051, overlap 100048 100046 CTCGCATTAACATTA TCGGCGCT GAT AGCACCGA TGTTACCACCATTAC Spea_0091 99901 - 100680 + | flagellar biosynthetic protein FliR Spea_0092 100677 - 101807 + | flagellar biosynthetic protein FlhB Spea_0093 101823 - 103904 + | flagellar biosynthesis protein FlhA TERM 93 103940 - 103923 - T 93 -9.9 -4.84527 | opp_overlap 103923 GCCACATACGAAAAA GGGATAG CTCG CTATCCC TTTTTTATTGCTCGT TERM 94 103923 - 103940 + T 100 -9.9 -5.52023 | opp_overlap 103923 GCCACATACGAAAAA GGGATAG CTCG CTATCCC TTTTTTATTGCTCGT Spea_0094 104937 - 103963 - | alpha/beta hydrolase fold TERM 95 105147 - 105129 - R 72 -9.6 -3.02984 | opp_overlap 105129 105131, overlap 105100 105128 105131 TTAAAAGCGATAAAC CACGAAGC GCC ACTTCGTG TCCTCTGTGGTCCAT TERM 96 105205 - 105234 + r 100 -16.7 -4.04318 | opp_overlap 105210 TGAGTACGTCGTTAA GTGAATGGCATTA CGGC TAATGCCATTCAC TTTATCCTGTATGAG TERM 97 105229 - 105210 - R 73 -9.4 -3.17194 | opp_overlap 105205 ACGTCGTTAAGTGAA TGGCATTA CGGC TAATGCCA TTCACTTTATCCTGT Spea_0095 107065 - 105266 - | hypothetical protein TERM 98 106714 - 106730 + g 71 -10.1 -3.19003 | overlap 106729 CGTTTTGCAGTTGGT CGCGCAG TAT CTGTGCG TTGATAGCGTCTTCT TERM 99 107358 - 107390 + r 72 -10 -2.74589 | gap 1, opp_overlap 107368, overlap 107368 ATTATATTTATCAGG CACAAAAAAACCGGC TAAG GCCGG-TTTTTTGAG GTTCTAATTGTACTT TERM 100 107368 - 107381 + r 93 -9.5 -5.11033 | opp_overlap 107368, overlap 107358 TCAGGCACAAAAAAA CCGGC TAAG GCCGG TTTTTTGAGGTTCTA TERM 101 107381 - 107368 - R 100 -9.5 -5.64274 | opp_overlap 107358 107368 TCAGGCACAAAAAAA CCGGC TAAG GCCGG TTTTTTGAGGTTCTA Spea_0096 108756 - 107416 - | coproporphyrinogen III oxidase Spea_0097 109511 - 109044 - | hypothetical protein TERM 102 109587 - 109564 - R 93 -9.7 -4.88736 | opp_overlap 109562 GATTATGGATAAAAA TATGGCATC AATAAA GATGCCATA AGGTTTACACATAAG Spea_0098 110141 - 109605 - | hypothetical protein TERM 103 109658 - 109689 + g 72 -5.2 -4.63527 | CAGACTCGAACTTAT CAAATAAGTCGTCA TCAC TAACGGCTTTTTTG TTTTTCGGCTCATCG Spea_0099 110863 - 110195 - | hypothetical protein TERM 104 110704 - 110719 + g 73 -4 -4.77036 | GGGCTTTTTGTTTGT TATTGG CAAG CCGATA TTTTTGCTGCTCAGC TERM 105 110920 - 110940 + r 95 -15.5 -2.90763 | opp_overlap 110920 TGAGAAATAAAAAAA GGCGACAGA TAA TCTGTCGCC TCTATAAAGTGTCAA TERM 106 110940 - 110920 - R 100 -15.5 -6.02919 | opp_overlap 110920 TGAGAAATAAAAAAA GGCGACAGA TAA TCTGTCGCC TCTATAAAGTGTCAA TERM 107 111256 - 111274 + r 86 -9 -4.44797 | overlap 111233 111273 CAGCTTCCTATGCTA TGTTTGTA TCC TACAAACA TTTTCCTATTGGTAG TERM 108 111620 - 111636 + r 84 -12.3 -3.0814 | opp_overlap 111620 GGATGATATAAAAAA GGACGGT GAA ACCGTCC TCTTAAGATCTAGCT TERM 109 111636 - 111620 - R 100 -12.3 -5.39721 | opp_overlap 111620 GGATGATATAAAAAA GGACGGT GAA ACCGTCC TCTTAAGATCTAGCT Spea_0100 112277 - 111657 - | cytochrome c class I TERM 110 112632 - 112596 - g 72 -9 -3.54424 | gap 1 GTCGAGTGCTTTAAA TTTACTGACT-GAGCAA AAAA TTGCTCGAACCAGTAAA ACGCCTGGGCGTACG Spea_0101 112447 - 113124 + | GTPase EngB TERM 111 113166 - 113184 + T 100 -8.1 -5.9663 | opp_overlap 113166 CAGATAGCTAAATGA CGCTCCT ATTAA AGGGGCG TTTTTTTTGGTCTTT TERM 112 113255 - 113236 - T 100 -7.8 -6.13 | ACAGGCAAAAAAAAA CCGACGGC ATAA ACCATCGG CATAAATTAGCTCTT TERM 113 113429 - 113403 - T 100 -16 -5.58454 | TTCAGACGAAAAAAA GCCCCAGCAAAT TAG ATTTGCTGAGGC GCCATAATTTGGCCA TERM 114 113759 - 113784 + T 81 -11.9 -2.52795 | opp_overlap 113754 AAATATTGAAGGGTA TGACTGGCGAA ATGC TCCGCCAGTCA TGACTTAAGCGGATT Spea_0102 116555 - 113799 - | DNA polymerase I Spea_0103 116943 - 117596 + | isoprenoid biosynthesis protein with amidotransferase-like domain TERM 115 117622 - 117650 + T 77 -10.2 -3.39327 | opp_overlap 117622 117623, overlap 117623 TTAAAGAGTCTATAA GCGTTCGCCCGC TGTTT GCGGGCTAACGA TTGTGGGTCTAGCAA TERM 116 117650 - 117622 - T 77 -10.2 -3.38218 | opp_overlap 117622 117623, overlap 117623 TTAAAGAGTCTATAA GCGTTCGCCCGC TGTTT GCGGGCTAACGA TTGTGGGTCTAGCAA TERM 117 117623 - 117649 + T 91 -13.7 -2.63382 | opp_overlap 117622 117623, overlap 117622 TAAAGAGTCTATAAG CGTTCGCCCGC TGTTT GCGGGCTAACG ATTGTGGGTCTAGCA TERM 118 117649 - 117623 - T 91 -13.7 -2.62449 | opp_overlap 117623 117622, overlap 117622 TAAAGAGTCTATAAG CGTTCGCCCGC TGTTT GCGGGCTAACG ATTGTGGGTCTAGCA Spea_0104 118556 - 117717 - | rhomboid family protein Spea_0105 118885 - 118577 - | rhodanese domain-containing protein TERM 119 118957 - 118922 - R 89 -9.3 -4.76963 | gap 1, opp_overlap 118922 TTAGAGAAGACAAAA GCGACTGTAATAGTCT CAAGC AGA-TATTACAGTCAC TTGTTCGGAGAATAA Spea_0106 120018 - 118993 - | L-threonine 3-dehydrogenase TERM 120 120063 - 120094 + r 89 -10.2 -4.21922 | opp_overlap 120070, overlap 120070 CTTGCTGAATGTCAT TCAAAAAGGGCTAC ATAC GTAGCCCCTATTGA TTTGATTTTAGCTGA TERM 121 120070 - 120087 + r 79 -11.3 -2.62701 | opp_overlap 120070, overlap 120063 AATGTCATTCAAAAA GGGCTAC ATAC GTAGCCC CTATTGATTTGATTT TERM 122 120087 - 120070 - R 95 -11.3 -4.67011 | opp_overlap 120070 120063 AATGTCATTCAAAAA GGGCTAC ATAC GTAGCCC CTATTGATTTGATTT Spea_0107 121298 - 120102 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 123 121252 - 121266 + g 70 -5 -4.51743 | CCTTCGGCTTTAACG TCGACA AGC TGTTGA TTTATTTGGTCGTAG TERM 124 121365 - 121376 + r 89 -5.8 -5.42259 | AACCCTAATTGCCGC GGCT CTAC AGCC TTTTTTTAAGACTAA Spea_0108 122191 - 121550 - | TetR family transcriptional regulator Spea_0109 122368 - 123633 + | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 125 123643 - 123685 + T 90 -11.5 -3.95584 | opp_overlap 123655, overlap 123644 123655 CGTTAGTGTGGTGAT ATCAGCAAAAAAGGTCAGC TTTGC GCTGACCTTTTTTATTGAA TTTGATTGCTAACAC TERM 126 123644 - 123684 + T 100 -15 -2.97029 | opp_overlap 123655, overlap 123643 123655 GTTAGTGTGGTGATA TCAGCAAAAAAGGTCAGC TTTGC GCTGACCTTTTTTATTGA ATTTGATTGCTAACA TERM 127 123655 - 123673 + T 100 -10.3 -5.52096 | opp_overlap 123655, overlap 123644 123643 GATATCAGCAAAAAA GGTCAGC TTTGC GCTGACC TTTTTTATTGAATTT TERM 128 123673 - 123655 - T 100 -10.3 -5.20216 | opp_overlap 123655 123644 123643 GATATCAGCAAAAAA GGTCAGC TTTGC GCTGACC TTTTTTATTGAATTT Spea_0110 124431 - 123700 - | 3-deoxy-D-manno-octulosonic-acid kinase TERM 129 124403 - 124415 + g 100 -9.1 -5.47399 | opp_overlap 124401, overlap 124389 TGGCAATAAGCGATA CTGCC TTT GGCAG TTTTTTTAAACTTCA Spea_0111 124517 - 125596 + | glycosyl transferase family protein TERM 130 126661 - 126675 + G 73 -10 -3.32769 | opp_overlap 126652, overlap 126654 TAGAAACGGCTTTGG CGCAGT GTG ACTGCG TTAATGGTTTGGAGC Spea_0112 125661 - 126743 + | hypothetical protein TERM 131 126935 - 126920 - g 76 -4 -5.00616 | TGTTTTGCCAAAAAA GATCGA GATT TCAATC GATTCTGGAACTTGG Spea_0113 126743 - 127828 + | glycosyl transferase group 1 TERM 132 128692 - 128676 - g 77 -10.9 -3.281 | opp_overlap 128675, overlap 128674 128691 TGTTAATGTAGAACA GCTCGAT GAA ATCGAGC CTGCATTAAAGGAGG Spea_0114 127858 - 128913 + | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Spea_0115 129997 - 128921 - | glycosyl transferase group 1 TERM 133 130892 - 130861 - g 76 -2.4 -5.33405 | gap 1 GCCAGCAAAGAAAAA GTTGA-GCTTAGC GATGAAA GCTAAGCGTGAAC TGGAGCGTATTTTTA Spea_0116 130187 - 130930 + | glycosyl transferase family protein Spea_0117 131013 - 131174 + | hypothetical protein Spea_0118 131327 - 132550 + | sodium/glutamate symporter TERM 134 132591 - 132574 - f 100 -12.7 -5.05782 | opp_overlap 132574 ATCTATTTCAAAAAA GGCACGC ATTA GCGTGCC TTTTTTATTGGACTA TERM 135 132574 - 132591 + F 100 -12.7 -5.46657 | opp_overlap 132574 ATCTATTTCAAAAAA GGCACGC ATTA GCGTGCC TTTTTTATTGGACTA Spea_0119 132694 - 132978 + | hypothetical protein Spea_0120 132978 - 133850 + | hypothetical protein Spea_0121 133841 - 134626 + | hypothetical protein Spea_0122 134632 - 135111 + | ECF subfamily RNA polymerase sigma-24 factor Spea_0123 135114 - 135884 + | hypothetical protein Spea_0124 136391 - 135909 - | hypothetical protein Spea_0125 136765 - 138279 + | catalase TERM 136 138331 - 138352 + F 71 -7.3 -3.89822 | CGGCGTTAACAGTTC CCGAGTCAG TCTC TTGATTCGG TTTCTCGAGTAAGTC TERM 137 138656 - 138643 - g 72 -8.1 -3.77489 | opp_overlap 138642 138640 AAGTTAACAGCCAAA CCGCA CAAA TGCGG CTATTGGTCGACTAT TERM 138 138801 - 138813 + G 72 -5.5 -4.41494 | opp_overlap 138801 TACAATGGCCAAGCA CAGGC TGC GTCTG TTTTACTTGAGCATG Spea_0126 138483 - 139061 + | ankyrin TERM 139 139078 - 139103 + T 100 -13.4 -4.18044 | opp_overlap 139078 139082, overlap 139082 TTTGCTTTTAAACAA CAAACGCAGC CCAAGA GCTGCGTTTG TTTACTTGTTTGTCA TERM 140 139103 - 139078 - T 100 -14.1 -3.90744 | opp_overlap 139078 139082, overlap 139082 TTTGCTTTTAAACAA CAAACGCAGCC CAAG AGCTGCGTTTG TTTACTTGTTTGTCA TERM 141 139082 - 139099 + T 87 -8.4 -4.63748 | opp_overlap 139078 139082, overlap 139078 CTTTTAAACAACAAA CGCAGC CCAAGA GCTGCG TTTGTTTACTTGTTT TERM 142 139099 - 139082 - T 88 -9.1 -4.56978 | opp_overlap 139082 139078, overlap 139078 CTTTTAAACAACAAA CGCAGCC CAAG AGCTGCG TTTGTTTACTTGTTT Spea_0127 139932 - 139162 - | molybdopterin biosynthesis protein MoeB Spea_0128 141211 - 139967 - | molybdenum cofactor synthesis domain-containing protein TERM 143 141297 - 141307 + H 79 -6.8 -4.57341 | GTAGATGGCTATGAT CTGC GCG GCAG TTTTTAAACAGAGTT TERM 144 141999 - 141983 - g 79 -8 -4.386 | CAATCGTCGATAAAA TTCGCC TAGTG GGCGAA GATGGCAAGGCGCTG Spea_0129 141562 - 142089 + | ferroxidase TERM 145 142112 - 142128 + T 100 -12.3 -5.28176 | opp_overlap 142112 GATTGAAGTAAAAAA GAGCAGC TTA GCTGCTC TTTTTTATGGCTACA TERM 146 142128 - 142112 - T 100 -12.3 -5.28481 | opp_overlap 142112 GATTGAAGTAAAAAA GAGCAGC TTA GCTGCTC TTTTTTATGGCTACA Spea_0130 145392 - 142174 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 147 145661 - 145641 - R 91 -9.7 -4.62051 | opp_overlap 145641 AAATAGGATATAAAA CAGCCGC ATAGGCA GCGGCTG TTGATTCCGATCTTA TERM 148 145641 - 145661 + r 75 -9.7 -3.37499 | opp_overlap 145641 AAATAGGATATAAAA CAGCCGC ATAGGCA GCGGCTG TTGATTCCGATCTTA Spea_0131 146316 - 145678 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 149 148936 - 148948 + G 71 -7.7 -4.0031 | TGATGTGAAGACTGA CAGCA ATA TGCTG TTGTTTGATACCGAT Spea_0132 146933 - 149083 + | oligopeptidase B Spea_0133 149083 - 149442 + | excinuclease ABC subunit C TERM 150 149503 - 149467 - T 76 -10.9 -2.73364 | opp_overlap 149464 149471 GTGTTAGGTTAAGTA TTGATGGCGTAACCACT TAC AGAGGTTACGCCATGTA CTGACTTGAGTTAAC TERM 151 149471 - 149499 + T 100 -16.1 -2.83112 | opp_overlap 149467, overlap 149464 TAGGTTAAGTATTGA TGGCGTAACCACT TAC AGAGGTTACGCCA TGTACTGACTTGAGT Spea_0134 150183 - 149524 - | signal peptidase I TERM 152 149708 - 149696 - G 72 -9.1 -3.56273 | CCCATCACCATATAA TGCCC TTC GGGCA CAATTACCGTTTCGA Spea_0135 151352 - 150597 - | putative lipoprotein TERM 153 151381 - 151403 + H 79 -4.8 -5.17353 | overlap 151382 TTTATTATTCTGATT GGCAGCATTT ACA AGCTGCTGTC TTTTTTAATACCTAT TERM 154 151929 - 151915 - g 72 -6.4 -4.24204 | CAGGCAGATTTAAAA GCAGAC TTT ATCTGC AGCGATATCTATAGC TERM 155 152057 - 152067 + G 80 -6.8 -4.57353 | overlap 152054 CGAGTAAGCTGGTGG CTGG TGG CCAG TTTTATATGGTGGAG Spea_0136 151630 - 152433 + | methyltransferase type 12 TERM 156 152438 - 152459 + T 86 -10.1 -4.06904 | opp_overlap 152436 152440, overlap 152440 AGAAAGCCTAAAAGG AACAGCGCC AATT GGCGCTGTG TTTATGATTGAGTCG TERM 157 152457 - 152440 - T 90 -12.7 -3.70039 | opp_overlap 152438 152440, overlap 152436 AAAGCCTAAAAGGAA CAGCGCC AATT GGCGCTG TGTTTATGATTGAGT TERM 158 152440 - 152457 + T 90 -12.7 -3.62572 | opp_overlap 152440 152436, overlap 152438 AAAGCCTAAAAGGAA CAGCGCC AATT GGCGCTG TGTTTATGATTGAGT Spea_0137 154326 - 152488 - | peptidase M14 carboxypeptidase A TERM 159 152759 - 152717 - G 70 -2.1 -5.02476 | gap 1, overlap 152705 152703 152701 152718 152719 ATAGGGTTGAAAAAA CCCCATTGGAACAGCGAATC GGGT GATT-GCGGTTCCAATAACA ATATGGCCAAGTCAC TERM 160 154164 - 154178 + g 70 -10 -3.05384 | CATCAGGAGCTTGGA GTAGCG ATT CGCTAC TTCCCTGCCACGGGA Spea_0138 154720 - 154511 - | XRE family transcriptional regulator Spea_0139 155139 - 154717 - | hypothetical protein TERM 161 154861 - 154851 - G 71 -6.8 -4.0257 | TGGAAAAACTAATAA TGGC GAC GCCA ACAGACAAAGCAAGA TERM 162 155382 - 155364 - R 100 -10.3 -5.28176 | opp_overlap 155364 TTTATTCATAAAAAA TCCCAGC ATATA GCTGGGA TTTTAATTGGGCCAC TERM 163 155364 - 155382 + r 90 -10.3 -4.4078 | opp_overlap 155364 TTTATTCATAAAAAA TCCCAGC ATATA GCTGGGA TTTTAATTGGGCCAC Spea_0140 156981 - 155440 - | phosphoenolpyruvate carboxykinase TERM 164 157168 - 157184 + r 73 -7.9 -3.84284 | opp_overlap 157169, overlap 157169 TTTAATCATAAAAAA AGCGCTC AAA GAGCGCC TTTAATCGGTTTTGC TERM 165 157183 - 157169 - R 100 -11.4 -5.71983 | opp_overlap 157169 157168 TTAATCATAAAAAAA GCGCTC AAA GAGCGC CTTTAATCGGTTTTG TERM 166 157169 - 157183 + r 80 -11.4 -2.89848 | opp_overlap 157169, overlap 157168 TTAATCATAAAAAAA GCGCTC AAA GAGCGC CTTTAATCGGTTTTG Spea_0141 158100 - 157228 - | Hsp33-like chaperonin Spea_0142 158515 - 158117 - | RNA-binding S4 domain-containing protein Spea_0143 158789 - 159706 + | general secretion pathway protein C Spea_0144 159791 - 161923 + | general secretion pathway protein D TERM 167 162019 - 162040 + G 76 -8.7 -4.1196 | opp_overlap 162019 162024 TTTTTCATTCGAATA GCAAAGAGC GTTT GCCCTTTGC TTTTGCCCATAGATT TERM 168 162040 - 162019 - g 75 -10.9 -3.05844 | opp_overlap 162019, overlap 162024 TTTTTCATTCGAATA GCAAAGAGC GTTT GCCCTTTGC TTTTGCCCATAGATT TERM 169 162712 - 162728 + G 71 -9.5 -3.14132 | opp_overlap 162705, overlap 162697 TGACCGAAGCGGTTC GTCATCA ATT TGATGAC TTAATCCGCAGACCA Spea_0145 161916 - 163487 + | general secretory pathway protein E TERM 170 164251 - 164237 - g 72 -5 -4.65895 | overlap 164249 CGTTTCACCTAAAAA TCGCAT GAA ATACGA CAGCATGTTGCTGCG Spea_0146 163491 - 164714 + | general secretion pathway protein F Spea_0147 164778 - 165212 + | general secretion pathway protein G TERM 171 165248 - 165277 + GF 74 -6.3 -4.35682 | opp_overlap 165238 165248, overlap 165245 ACTTAGCACGCCAAA CGGGCTTCACCTT AATG GAGGTGTTGCTCG TTGTTTTGCTTATGG TERM 172 165360 - 165345 - gf 74 -3.9 -4.93877 | opp_overlap 165359, overlap 165355 165359 GGCGAGTAAAGAAAA GGCGC TAGAAC GCACC GCGCAGCAGTTCATG Spea_0148 165175 - 165807 + | general secretion pathway protein H Spea_0149 165804 - 166181 + | general secretion pathway protein I Spea_0150 166162 - 166887 + | general secretion pathway protein J TERM 173 167665 - 167691 + G 74 -10.4 -3.16564 | opp_overlap 167665 167663, overlap 167673 ATGGATATGACAAGA TTGATGAGTTTT GGG AAAATTCATCAA TTGCTAGCCTCGCGA Spea_0151 166887 - 167867 + | general secretion pathway protein K TERM 174 168141 - 168129 - g 72 -4.7 -4.57755 | overlap 168131 AGCTACCAGAGAAAA GCCAG CGG CAGGC CGTTAAGGCTTTACC Spea_0152 167912 - 169105 + | general secretion pathway protein L Spea_0153 169107 - 169583 + | general secretion pathway M protein Spea_0154 169593 - 170351 + | type II secretion system protein N TERM 175 170376 - 170392 + T 100 -6.5 -5.95286 | opp_overlap 170376 TTTGGATACTTTAAA GGCGC CTAAACA GCGCC TTTTTTGTTTTTGAT Spea_0155 171110 - 170442 - | HAD family hydrolase TERM 176 171356 - 171378 + G 82 -7.7 -4.67982 | gap 1 CGCTGTCATGGTTGT GC-CGGTGCT CAAT GGCACCGAGC TTTTATTGGGTAGAG Spea_0156 171198 - 171752 + | ADP-ribose diphosphatase NudE Spea_0157 171797 - 172606 + | 3'(2'),5'-bisphosphate nucleotidase Spea_0158 172599 - 173060 + | GCN5-related N-acetyltransferase TERM 177 173215 - 173225 + G 72 -8.2 -3.77491 | overlap 173214 CCTCTTTGTTAATCT GGCC GCA GGCC TATTTATTCTGCCTT TERM 178 174739 - 174705 - g 95 -12.3 -4.11304 | gap 1, overlap 174706 TGAAGTTAGAAATAA CCCCATTAGCT-GCCG GTAA CAGCGAGCTAATGGGA TGGGCTTAGAGCAAA TERM 179 174738 - 174706 - g 85 -13.6 -3.06059 | gap 1, overlap 174705 GAAGTTAGAAATAAC CCCATTAGCT-GCCG GTAA CAGCGAGCTAATGGG ATGGGCTTAGAGCAA Spea_0159 173066 - 174748 + | major facilitator transporter Spea_0160 175860 - 174763 - | tRNA 2-selenouridine synthase Spea_0161 176900 - 175860 - | selenide, water dikinase TERM 180 177074 - 177058 - R 100 -9.4 -5.93809 | opp_overlap 177058 CGTTGAGAAAAAAAA GCCGCT GTAAT AGCGGC TTCTTCACTTTTAAA TERM 181 177058 - 177074 + r 84 -10.1 -3.81879 | opp_overlap 177058 CGTTGAGAAAAAAAA GCCGCTG TAA TAGCGGC TTCTTCACTTTTAAA Spea_0162 178227 - 177091 - | stearoyl-CoA 9-desaturase TERM 182 177203 - 177216 + g 74 -3.8 -5.0133 | AGCTGTTTACGTTTG GCCT CAATTA AGGC TTTTTTAGCAGCGTA TERM 183 177516 - 177486 - G 77 -10.6 -3.34517 | opp_overlap 177488, overlap 177484 AGTCGTTCTCAAAGA TATGGTGATAGTTA TGG TAACCCTCACCATA GGTTAACAGTGCGAT TERM 184 178302 - 178316 + G 78 -5.8 -4.88067 | TGTTAAAAAGCGGTA TTATTC AAG GAATAA TTTTTGTAAGTAGGT TERM 185 178708 - 178725 + G 82 -7 -4.88405 | opp_overlap 178683 TTTTAGAGGTGCAGT TGCTCG TGAAAT CGAGCA TTTTATTTCAGAATT Spea_0163 178274 - 178951 + | DNA-binding transcriptional repressor FabR TERM 186 178964 - 178983 + T 89 -9.3 -4.73388 | opp_overlap 178964 TAACTGAAACAAAAA CGGCATC CATAAA GATGCCG TTTTTAATGAGACTT TERM 187 178983 - 178964 - T 100 -10 -5.33026 | opp_overlap 178964 TAACTGAAACAAAAA CGGCATCC ATAA AGATGCCG TTTTTAATGAGACTT Spea_0164 180114 - 179017 - | tRNA (uracil-5-)-methyltransferase TERM 188 180941 - 180954 + G 76 -4.5 -4.98255 | gap 1 TTCAGGAGTTGCAAT CG-CCC AGA GGGTCG TTTTTCTGCTTAACG Spea_0165 180312 - 181118 + | glutamate racemase Spea_0166 181587 - 181132 - | RNP-1 like RNA-binding protein TERM 189 183967 - 184000 + H 73 -7 -4.15854 | TCCACTCTGACCCAC CAAAATCTTTATTT TCTCCT AAAGAAAGATTTTG TTTTAACGTAAATTT TERM 190 184191 - 184159 - H 79 -10.8 -3.12142 | opp_overlap 184160, overlap 184157 184155 184166 TGCACAGGTAAGAGA TGCCAAAGATAAAT GCAGA ATTTATCTTTGGCT TTTTTAAGCCCGCTC TERM 191 184160 - 184190 + H 100 -14.3 -5.00884 | opp_overlap 184159 184157 184155 184166 GCACAGGTAAGAGAT GCCAAAGATAAAT GCAGA ATTTATCTTTGGC TTTTTTAAGCCCGCT TERM 192 184965 - 184953 - H 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 193 185763 - 185747 - H 86 -9.4 -4.08546 | overlap 185760 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 194 186269 - 186258 - H 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 195 187723 - 187694 - H 74 -6.5 -4.44608 | GCGACTTAAAAAGAA TTTAGCATAATGC ATAA GCAATTTGCTAAA GGAGCGGTAGTTCAG TERM 196 187808 - 187843 + H 100 -15.6 -3.33897 | opp_overlap 187808 187815, overlap 187815 CTCCGCCAACATAAA GATGAAAGCCTCTGCA GCAA TGCAGAGGCTTTTTTC GTTTTGTAATATTTA TERM 197 187843 - 187808 - H 100 -13.4 -4.1891 | opp_overlap 187808 187815, overlap 187815 CTCCGCCAACATAAA GATGAAAGCCTCTGCA GCAA TGCAGAGGCTTTTTTC GTTTTGTAATATTTA TERM 198 187815 - 187836 + H 100 -14.5 -5.50313 | opp_overlap 187808 187815, overlap 187808 AACATAAAGATGAAA GCCTCTGCA GCAA TGCAGAGGC TTTTTTCGTTTTGTA TERM 199 187836 - 187815 - H 100 -14.5 -4.07089 | opp_overlap 187815 187808, overlap 187808 AACATAAAGATGAAA GCCTCTGCA GCAA TGCAGAGGC TTTTTTCGTTTTGTA TERM 200 187995 - 187952 - H 90 -11.3 -3.92869 | opp_overlap 187963, overlap 187963 GTACTCACCCACAAA CATTACGA-TAAGCCCTGCTA GCAA TAGCAGGGCTTTTTCGTA-TG TATCTTTCAGAGCAA TERM 201 187984 - 187963 - H 100 -14.5 -3.48378 | opp_overlap 187963, overlap 187952 CAAACATTACGATAA GCCCTGCTA GCAA TAGCAGGGC TTTTTCGTATGTATC TERM 202 187963 - 187984 + H 100 -14.5 -4.86133 | opp_overlap 187963 187952 CAAACATTACGATAA GCCCTGCTA GCAA TAGCAGGGC TTTTTCGTATGTATC TERM 203 188164 - 188185 + H 100 -14.5 -4.72272 | opp_overlap 188164 CCAGCATTACGATAA GCCCTGCTA GCAA TAGCAGGGC TTTTTCGTGCCAGCA TERM 204 188185 - 188164 - H 100 -14.5 -3.45023 | opp_overlap 188164 CCAGCATTACGATAA GCCCTGCTA GCAA TAGCAGGGC TTTTTCGTGCCAGCA TERM 205 188372 - 188382 + H 75 -5.4 -4.70659 | GAACCGCTTGTTTAG GCTA CAA TAGC TTTTTACCTGTCAAC TERM 206 188632 - 188648 + G 71 -9.5 -3.19449 | opp_overlap 188623 188618 188632 ACGAAAGGTATTGAA GTTTCAG AAT CTGAAAC TTACTACGATCTTTC TERM 207 188648 - 188632 - g 71 -9.5 -3.11999 | opp_overlap 188632, overlap 188623 188618 ACGAAAGGTATTGAA GTTTCAG AAT CTGAAAC TTACTACGATCTTTC TERM 208 189289 - 189279 - g 72 -5.4 -4.37502 | AGCAGTACACGAAAA CCAA GCC TTGG TACTAATTAACAAAT Spea_0167 188407 - 189432 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 209 190342 - 190356 + G 74 -5.7 -4.64676 | TGTGCTAGAGACGGC CTCTG GAAAA CAGAG TTTTATTGGCGGTGA Spea_0168 189434 - 190396 + | biotin--protein ligase TERM 210 190453 - 190443 - T 71 -6.8 -4.08767 | opp_overlap 190443 TCTATTTTCTCAAAA GGAC TTG GTCC ATCATATGGTCAGGT TERM 211 190443 - 190470 + T 82 -7.8 -4.58395 | gap 1, opp_overlap 190443 TCTATTTTCTCAAAA GGACTTGGTCCAT CAT ATGG-TCAGGTCC TTTTTGCAGAATAAG Spea_0169 191379 - 190429 - | pantothenate kinase TERM 212 191676 - 191689 + H 79 -6.7 -4.52589 | CCCGAGTTCGACTCT TGGTG CCGG CACCA TTTTCTCTGGAGGGG TERM 213 191924 - 191941 + H 95 -11.3 -5.12707 | opp_overlap 191924 CTTAATCAGTAGAAA GCACTCG GTCT CGAGTGC TTTTTTCCCGTTTAA TERM 214 191941 - 191924 - H 90 -11.3 -4.02022 | opp_overlap 191924 CTTAATCAGTAGAAA GCACTCG GTCT CGAGTGC TTTTTTCCCGTTTAA TERM 215 192011 - 192034 + H 85 -5.4 -5.24989 | gap 1, opp_overlap 192011, overlap 192013 TATCTTACTAACCGA TTCGATGACAT TTT ATG-CATCGGA TTTTTTGCTATATGC Spea_0170 192087 - 193271 + | elongation factor Tu TERM 216 193297 - 193326 + F 100 -12.3 -5.16151 | opp_overlap 193304, overlap 193304 GTCTTAACTCGATAC TGAAAAAGGCAGC TTAG GCTGCCTTTTTTG TTTTTATTGCATTTA TERM 217 193304 - 193319 + F 100 -10.4 -6.01725 | opp_overlap 193304, overlap 193297 CTCGATACTGAAAAA GGCAGC TTAG GCTGCC TTTTTTGTTTTTATT TERM 218 193319 - 193304 - f 93 -10.4 -4.70659 | opp_overlap 193304 193297 CTCGATACTGAAAAA GGCAGC TTAG GCTGCC TTTTTTGTTTTTATT Spea_0171 193561 - 193932 + | preprotein translocase subunit SecE Spea_0172 193942 - 194493 + | NusG antitermination factor TERM 219 194520 - 194554 + F 82 -8 -4.57073 | opp_overlap 194522, overlap 194522 GCAAATTTTATTTGA AATGGGTGTGAATT TATATAT AATTCGCACCCATA TTTTTCGGGGAGCTG TERM 220 194552 - 194522 - f 72 -8.4 -3.61371 | opp_overlap 194522 194520 AAATTTTATTTGAAA TGGGTGTGAATT TATATAT AATTCGCACCCA TATTTTTCGGGGAGC TERM 221 194522 - 194552 + F 86 -10.6 -3.90048 | opp_overlap 194522, overlap 194520 AAATTTTATTTGAAA TGGGTGTGAATT TATATAT AATTCGCACCCA TATTTTTCGGGGAGC Spea_0173 194619 - 195047 + | 50S ribosomal protein L11 Spea_0174 195052 - 195753 + | ribosomal protein L1 Spea_0175 196021 - 196518 + | 50S ribosomal protein L10 Spea_0176 196575 - 196940 + | ribosomal protein L7/L12 TERM 222 196957 - 196937 - f 75 -9.9 -3.3382 | overlap 196941 TGCAGTAGAGATCAA GTAAGTTAT ACT ATAACTTAC AACCTCCCGAGTAAT TERM 223 196979 - 196960 - f 74 -9.2 -3.45768 | TACTATAACTTACAA CCTCCCGA GTAA TCGGGTGG AGGCTGGCGGTTTTT TERM 224 196981 - 197006 + F 100 -13.3 -5.08169 | GAGTAATCGGGTGGA GGCTGGCGGTT TTTT AACCGTCGGCC TTTTTTGCGCTGTAT Spea_0177 197180 - 201211 + | DNA-directed RNA polymerase, beta subunit TERM 225 201240 - 201268 + F 89 -11.8 -3.71527 | gap 1, opp_overlap 201240, overlap 201242 CTCTATTTGGCAAAA TC-GGTGCTCTGC ATAT GCGGAGCACCTGA TTTAACTCCTTCAGG TERM 226 201268 - 201240 - f 86 -9.6 -4.09685 | gap 1, opp_overlap 201240 201242 CTCTATTTGGCAAAA TC-GGTGCTCTGC ATAT GCGGAGCACCTGA TTTAACTCCTTCAGG TERM 227 201242 - 201265 + F 100 -14.6 -2.9583 | opp_overlap 201240, overlap 201240 CTATTTGGCAAAATC GGTGCTCTGC ATAT GCGGAGCACC TGATTTAACTCCTTC TERM 228 202036 - 202067 + G 72 -6.6 -4.29738 | gap 1, opp_overlap 202035, overlap 202036 GTTCTGCCACCAGAT C-TACGCCCTCTAGT TCC ACTAGATGGCGGACG TTTTGCTACCTCTGA TERM 229 203010 - 202990 - g 74 -10.5 -3.20011 | opp_overlap 202990 202997, overlap 202988 202986 GAAAAAGTGAAGACA CGTCGTATC GTT GATACAACG GTTGGTCGTGCATTG Spea_0178 201292 - 205506 + | DNA-directed RNA polymerase subunit beta' TERM 230 205530 - 205562 + F 90 -12.9 -2.8085 | opp_overlap 205539, overlap 205539 GAAAAGTAAATAGAT TGTAAAAAAGGCGCT TTA AGCGCCTTTTTTTTA CTTTAAATCGGTTAA TERM 231 205553 - 205539 - f 95 -11.4 -5.08169 | opp_overlap 205530 205539 ATAGATTGTAAAAAA GGCGCT TTA AGCGCC TTTTTTTTACTTTAA TERM 232 205539 - 205553 + F 100 -11.4 -6.02546 | opp_overlap 205539, overlap 205530 ATAGATTGTAAAAAA GGCGCT TTA AGCGCC TTTTTTTTACTTTAA Spea_0179 205696 - 206070 + | 30S ribosomal protein S12 Spea_0180 206151 - 206621 + | 30S ribosomal protein S7 TERM 233 206628 - 206649 + F 93 -13 -3.41234 | CGCTGGTAATATCTT GGCGTGGG CTTTGT CCCACGCC TTACTTGCATTGCTA Spea_0181 206697 - 208793 + | elongation factor G TERM 234 208831 - 208851 + F 95 -11.9 -4.36914 | ATACTTAATTGCTAT TGCTCGGTT GTA AGCCGAGCA TTTTCTGAAAAGAAA Spea_0182 208877 - 210061 + | elongation factor Tu TERM 235 210087 - 210116 + F 95 -14.5 -3.05384 | opp_overlap 210094, overlap 210094 GTCTTAACTCGATAC TGAAAAAGGCAGC ATAG GCTGCCTTTTTTA TTGCCTGAAGAAAAG TERM 236 210109 - 210094 - f 93 -10.4 -4.70659 | opp_overlap 210087 210094 CTCGATACTGAAAAA GGCAGC ATAG GCTGCC TTTTTTATTGCCTGA TERM 237 210094 - 210109 + F 100 -10.4 -5.4833 | opp_overlap 210094, overlap 210087 CTCGATACTGAAAAA GGCAGC ATAG GCTGCC TTTTTTATTGCCTGA Spea_0183 210423 - 210734 + | ribosomal protein S10 TERM 238 210832 - 210792 - g 74 -11.4 -2.90615 | gap 2, overlap 210789 ATCGGTCGTAAAGTA GGTA-TGACTCGC-ATCTTC AAT GAAGATGGCGCGTCAGTACC TGTAACAGTAATTGA Spea_0184 210762 - 211400 + | 50S ribosomal protein L3 Spea_0185 211418 - 212023 + | 50S ribosomal protein L4 Spea_0186 212020 - 212322 + | ribosomal protein L25/L23 Spea_0187 212340 - 213167 + | 50S ribosomal protein L2 Spea_0188 213179 - 213457 + | 30S ribosomal protein S19 Spea_0189 213473 - 213805 + | 50S ribosomal protein L22 Spea_0190 213815 - 214504 + | 30S ribosomal protein S3 Spea_0191 214516 - 214926 + | 50S ribosomal protein L16 Spea_0192 214926 - 215117 + | 50S ribosomal protein L29 TERM 239 215317 - 215337 + G 72 -10.5 -2.91452 | opp_overlap 215325 CGAATGCCGTCCGCT GTCTAAGAC TAA GTCTTGGAC TCTGGTTGAAGTAGT Spea_0193 215117 - 215365 + | ribosomal protein S17 TERM 240 215388 - 215408 + F 100 -8.9 -5.65496 | opp_overlap 215388 AGGTATTTAAGCAAA CGGCTCCTA AAG TTGGGGCCG TTTTTATTTTTAGTA Spea_0194 215545 - 215913 + | 50S ribosomal protein L14 TERM 241 216088 - 216065 - g 72 -5.2 -4.55446 | overlap 216071 CAAGAAACACCAAAA GCCAAACCCA CAAT TGGGCGTAGC TGGCGGTATTGTTGA Spea_0195 215925 - 216239 + | 50S ribosomal protein L24 Spea_0196 216253 - 216792 + | 50S ribosomal protein L5 TERM 242 216851 - 216839 - g 70 -4.7 -4.42238 | overlap 216824 GCACGTGAAGCAAAA CGTGC ACA GCTCG TAGCTAAGTTCGCTG Spea_0197 216803 - 217108 + | 30S ribosomal protein S14 TERM 243 217244 - 217233 - g 78 -5.8 -4.74103 | CTGCTAAGCTAAAAA TCGC TATC GCGA AAATGCTTAAAGAAG Spea_0198 217133 - 217525 + | 30S ribosomal protein S8 Spea_0199 217536 - 218066 + | 50S ribosomal protein L6 Spea_0200 218078 - 218428 + | 50S ribosomal protein L18 Spea_0201 218442 - 218948 + | 30S ribosomal protein S5 Spea_0202 219027 - 219140 + | ribosomal protein L30 Spea_0203 219142 - 219576 + | 50S ribosomal protein L15 TERM 244 220881 - 220929 + G 72 -8.9 -3.49653 | opp_overlap 220894 220898, overlap 220898 CTGTAATGAAGAAAG CTAACTTGGTAAACAAAGCGAAC TTA GATCGCTTTGGTCGCTAAGCTAG TTATCTCGGAGTGAT TERM 245 220916 - 220894 - g 79 -10.6 -3.5774 | opp_overlap 220881 220898, overlap 220898 AGCTAACTTGGTAAA CAAAGCGAAC TTA GATCGCTTTG GTCGCTAAGCTAGTT TERM 246 220912 - 220898 - g 72 -5.6 -4.42464 | opp_overlap 220898 220881, overlap 220894 AACTTGGTAAACAAA GCGAAC TTA GATCGC TTTGGTCGCTAAGCT Spea_0204 219584 - 220924 + | preprotein translocase subunit SecY TERM 247 221064 - 221098 + F 73 -7.1 -4.02571 | opp_overlap 221068, overlap 221066 221067 GCGTCAAGGCTAAAC AAAATTGACCAGCCC AGTCC GGGCTGGTCAAAATA TTATTTGCTAAATTG TERM 248 221066 - 221096 + F 77 -9.7 -3.59653 | opp_overlap 221068, overlap 221064 221067 GTCAAGGCTAAACAA AATTGACCAGCCC AGTCC GGGCTGGTCAAAA TATTATTTGCTAAAT TERM 249 221067 - 221095 + F 90 -13.2 -2.75069 | opp_overlap 221068, overlap 221066 221064 TCAAGGCTAAACAAA ATTGACCAGCCC AGTCC GGGCTGGTCAAA ATATTATTTGCTAAA TERM 250 221094 - 221068 - f 100 -17.4 -4.90525 | opp_overlap 221067 221066 221064 CAAGGCTAAACAAAA TTGACCAGCCCA GTC CGGGCTGGTCAA AATATTATTTGCTAA Spea_0206 221174 - 221530 + | 30S ribosomal protein S13 Spea_0207 221545 - 221937 + | 30S ribosomal protein S11 TERM 251 221926 - 221944 + F 72 -4.4 -4.7373 | opp_overlap 221926 CGTCCTCCTAAGAAA CGTCGCGT TTA ACTCGTCG TTTTTAATAGGATAG Spea_0208 221973 - 222593 + | 30S ribosomal protein S4 TERM 252 223584 - 223574 - g 71 -6.8 -4.07885 | opp_overlap 223573 223574 223562 223561 TATGCGTCTGGAAAA CTGG CCT CCAG CTAGTTTAGCAGACG Spea_0209 222618 - 223607 + | DNA-directed RNA polymerase subunit alpha Spea_0210 223647 - 224039 + | 50S ribosomal protein L17 TERM 253 224078 - 224059 - T 100 -13.6 -4.42386 | opp_overlap 224059 GTCTTAGTTATAAAA GGCCGAAC ATTA GTTCGGCC TTTTTTATGTCCGAA TERM 254 224059 - 224078 + T 100 -13.6 -5.36441 | opp_overlap 224059 GTCTTAGTTATAAAA GGCCGAAC ATTA GTTCGGCC TTTTTTATGTCCGAA TERM 255 225031 - 225015 - T 93 -5.8 -5.61596 | opp_overlap 225015 ATGGGCATAAAAAAA GCCTCC GTTAA GAAGGC TTTTTAGATGAGAGC Spea_0211 225544 - 225056 - | cytochrome c-type biogenesis protein CcmE Spea_0212 225741 - 225544 - | Heme exporter protein D (CcmD) Spea_0213 226487 - 225741 - | heme exporter protein CcmC Spea_0214 227175 - 226489 - | heme exporter protein CcmB Spea_0215 227835 - 227185 - | cytochrome c biogenesis protein CcmA Spea_0216 228156 - 228449 + | cytochrome c class I TERM 256 228486 - 228471 - T 82 -6 -4.84527 | opp_overlap 228472, overlap 228472 GCTAGACATCAAAAA GCCGGC CTAA GCCGGT TTTTTTGTGTCTAGA TERM 257 228472 - 228485 + T 100 -9.5 -5.76633 | opp_overlap 228471 228472 CTAGACATCAAAAAG CCGGC CTAA GCCGG TTTTTTTGTGTCTAG TERM 258 228485 - 228472 - T 77 -9.5 -3.49993 | opp_overlap 228472, overlap 228471 CTAGACATCAAAAAG CCGGC CTAA GCCGG TTTTTTTGTGTCTAG TERM 259 229218 - 229189 - T 79 -10.9 -3.15013 | opp_overlap 229197, overlap 229187 229197 AGTCGAGAATAGACA TAAAAAAACCGAC TATC GCCGGTTTTTTCA GTAGTTAAGTCTTAT TERM 260 229210 - 229197 - T 100 -5.9 -5.77988 | opp_overlap 229197, overlap 229189 229187 ATAGACATAAAAAAA CCGAC TATC GCCGG TTTTTTCAGTAGTTA TERM 261 229197 - 229210 + T 74 -3.7 -5.12617 | opp_overlap 229197 229189 229187 ATAGACATAAAAAAA CCGAC TATC GCCGG TTTTTTCAGTAGTTA Spea_0217 230483 - 229230 - | TPR repeat-containing protein TERM 262 230526 - 230514 - H 79 -6.9 -4.57569 | TTAGTTTGCGAAAAA GCGGC TTC ACCGC TGAACTAGGGATAAG Spea_0218 230915 - 232894 + | cytochrome c-type biogenesis protein CcmF TERM 263 233011 - 233050 + G 83 -10 -4.08767 | opp_overlap 233020 233025, overlap 233012 CAACAACTCGATTCA GCTCTAGAAGGAAAGCCG ATCC CGGCTTTCCAGTTAGAGG TTTTAGAAAAGTCAG TERM 264 233012 - 233049 + G 82 -13.5 -3.05046 | opp_overlap 233020 233025, overlap 233011 AACAACTCGATTCAG CTCTAGAAGGAAAGCCG ATCC CGGCTTTCCAGTTAGAG GTTTTAGAAAAGTCA TERM 265 233041 - 233020 - g 93 -14.5 -3.31461 | opp_overlap 233012 233011, overlap 233025 GATTCAGCTCTAGAA GGAAAGCCG ATCC CGGCTTTCC AGTTAGAGGTTTTAG TERM 266 233078 - 233061 - g 72 -5.5 -4.38154 | AGAGGTTTTAGAAAA GTCAGGG GAAA CCGTGAC TAATGAAACGCTAAA Spea_0219 232912 - 233466 + | periplasmic protein thiol--disulphide oxidoreductase DsbE Spea_0220 233478 - 233945 + | cytochrome C biogenesis protein Spea_0221 233942 - 234538 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 267 234588 - 234560 - T 90 -13.3 -2.78216 | opp_overlap 234567, overlap 234567 TAGTGTTATTAATGA TAAAAAAGGGGCT TTT AGCCCCTTTTTTG CACGTATCGTTTGAT TERM 268 234581 - 234567 - T 100 -11.4 -5.38249 | opp_overlap 234567, overlap 234560 ATTAATGATAAAAAA GGGGCT TTT AGCCCC TTTTTTGCACGTATC TERM 269 234567 - 234581 + T 95 -11.4 -5.04385 | opp_overlap 234567 234560 ATTAATGATAAAAAA GGGGCT TTT AGCCCC TTTTTTGCACGTATC TERM 270 237597 - 237585 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 271 238395 - 238379 - T 86 -9.4 -4.08546 | overlap 238392 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 272 238901 - 238890 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 273 240287 - 240309 + T 100 -14.2 -5.37593 | opp_overlap 240287 AAGAGAAGCGATAAA TCCCCAGCAC TAT GTGTTGGGGA TTTTTTCGTTTAACG TERM 274 240309 - 240287 - T 91 -12 -4.0174 | opp_overlap 240287 AAGAGAAGCGATAAA TCCCCAGCAC TAT GTGTTGGGGA TTTTTTCGTTTAACG Spea_0222 241726 - 240710 - | transposase IS116/IS110/IS902 family protein TERM 275 241628 - 241612 - G 75 -2.9 -5.1356 | TTTGAGCAAGAAAAA GCACTAA CTC TTTGCGC TTAATTATCTTCTTT TERM 276 241978 - 241999 + H 100 -15.9 -5.56112 | opp_overlap 241978 AAGAGAAGCGATAAA GCCCGTTGC TAAC GCAACGGGC TTTTTTCGTTTTTGT TERM 277 241999 - 241978 - H 100 -15.9 -4.0174 | opp_overlap 241978 AAGAGAAGCGATAAA GCCCGTTGC TAAC GCAACGGGC TTTTTTCGTTTTTGT TERM 278 242244 - 242298 + H 84 -12.4 -3.05997 | opp_overlap 242243 TGACATTTTCAACAT TCCCCACATCCATGTGGGTCA-ACGC GGAGA GCTTGTGACCTACA-GGATGTAGGGA TGTCATTTATGCAGA TERM 279 242416 - 242436 + H 100 -14.7 -5.1287 | opp_overlap 242392 242390 242416 AAGAGATTCGAGAAA GCCCGCGAC AAT GTTGCGGGC TTTTTTACGTCTGGG TERM 280 242436 - 242416 - H 93 -12.5 -3.9226 | opp_overlap 242416, overlap 242392 242390 AAGAGATTCGAGAAA GCCCGCGAC AAT GTTGCGGGC TTTTTTACGTCTGGG TERM 281 246010 - 245998 - H 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 282 246808 - 246792 - H 86 -9.4 -4.08546 | overlap 246805 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 283 247314 - 247303 - H 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 284 248999 - 248978 - H 100 -15.9 -4.0174 | opp_overlap 248978 AAGAGAAGCGATAAA GCCCGTTGC TAAT GCAACGGGC TTTTTTCGTATATGC TERM 285 248978 - 248999 + H 100 -15.9 -5.24989 | opp_overlap 248978 AAGAGAAGCGATAAA GCCCGTTGC TAAT GCAACGGGC TTTTTTCGTATATGC Spea_0223 249650 - 250924 + | competence/damage-inducible protein CinA TERM 286 250931 - 250974 + T 93 -14.2 -2.71268 | opp_overlap 250942, overlap 250942 CAAAAATAATGCATT TAGAATAAAAAGGCAGTATC AAGT GATACTGCCTTTTTGGTTTA TGATGTCTAATCCGC TERM 287 250942 - 250963 + T 100 -13.1 -5.05505 | opp_overlap 250942, overlap 250931 CATTTAGAATAAAAA GGCAGTATC AAGT GATACTGCC TTTTTGGTTTATGAT TERM 288 250963 - 250942 - T 100 -13.1 -5.20333 | opp_overlap 250942 250931 CATTTAGAATAAAAA GGCAGTATC AAGT GATACTGCC TTTTTGGTTTATGAT Spea_0224 251543 - 251001 - | hypothetical protein TERM 289 251526 - 251511 - G 77 -10.4 -3.46509 | opp_overlap 251510 251509 251511 251524 TGTCAATAACAGCAA GGCGCT AGTA AGCGCC ACTTTTAGTAGCTTC TERM 290 251511 - 251526 + g 70 -10.4 -2.50381 | opp_overlap 251511, overlap 251510 251509 251524 TGTCAATAACAGCAA GGCGCT AGTA AGCGCC ACTTTTAGTAGCTTC Spea_0225 254179 - 251543 - | phosphoenolpyruvate carboxylase TERM 291 252061 - 252076 + g 73 -7.5 -4.07687 | GAAGGCTCTCAATGC CGCCG TCGACT CGGCG TTTTGCCGGGCGACT TERM 292 252090 - 252103 + g 72 -6.7 -4.28548 | CGTTTTGCCGGGCGA CTACC TAGT GGTAG TTTTCCTAGCTCAAT Spea_0226 255498 - 254347 - | acetylornithine deacetylase TERM 293 255268 - 255217 - G 75 -2.8 -5.10461 | gap 1, opp_overlap 255232, overlap 255247 TTCAGTTAACAAAAA TGGG-TCTTGGCTCCAGCGTCCTTC ATC GAAGGGCACTGTATCCGTGTGCCCA GCCAATAGTAAGCCT Spea_0227 255774 - 256763 + | N-acetyl-gamma-glutamyl-phosphate reductase Spea_0228 256782 - 257585 + | acetylglutamate kinase Spea_0229 257598 - 258503 + | ornithine carbamoyltransferase TERM 294 258549 - 258522 - f 70 -5.6 -4.40561 | overlap 258523 258525 258529 CTTTTTGAAAAATAA CTATCAATCTGC ATTG GCAGATCGACAT AAAAAACAGTTAGTA TERM 295 258548 - 258523 - f 70 -9.1 -3.23855 | overlap 258522 258525 258529 TTTTTGAAAAATAAC TATCAATCTGC ATTG GCAGATCGACA TAAAAAACAGTTAGT TERM 296 258546 - 258525 - f 73 -9.5 -3.17725 | overlap 258523 258522 258529 TTTGAAAAATAACTA TCAATCTGC ATTG GCAGATCGA CATAAAAAACAGTTA Spea_0230 258575 - 259813 + | argininosuccinate synthase Spea_0231 259924 - 261294 + | argininosuccinate lyase TERM 297 261321 - 261346 + T 100 -15.5 -5.42164 | opp_overlap 261321 GTAGGTGTAAAAAAA CGCGGTCATTC TGTT GAGTGACCGCG TTTTTATTATTTCTG TERM 298 261346 - 261321 - T 100 -13.3 -5.42259 | opp_overlap 261321 GTAGGTGTAAAAAAA CGCGGTCATTC TGTT GAGTGACCGCG TTTTTATTATTTCTG Spea_0232 263947 - 261398 - | 1A family penicillin-binding protein TERM 299 261580 - 261592 + g 70 -9.1 -3.46602 | CGATACCTTCTGGTG GTGCC ATT GGCAC TTCTGGTGTACCCGC TERM 300 263508 - 263521 + g 72 -5.3 -4.57516 | TGCTCGATATGGATC GAGAT AAAG ATCTC TTTTACTTTGCGTAT Spea_0233 264383 - 265462 + | type IV pilus assembly protein PilM Spea_0234 265450 - 266031 + | fimbrial assembly family protein Spea_0235 266028 - 266648 + | pilus assembly protein PilO Spea_0236 266645 - 267163 + | pilus assembly protein PilP TERM 301 267461 - 267451 - g 72 -5.4 -4.4891 | TTCAGCATTAGAAAA GCAA ACT TTGC CGATTAAAACCGTTG Spea_0237 267170 - 269236 + | type IV pilus secretin PilQ TERM 302 269251 - 269277 + F 100 -16.7 -2.71693 | opp_overlap 269255, overlap 269255 AATTATTTAGGCCCC CAAAGCCAGCG AAATC CGCTGGCTTTG TCAGTTTAGTTGATA TERM 303 269255 - 269273 + F 91 -11.7 -4.03806 | opp_overlap 269255, overlap 269251 ATTTAGGCCCCCAAA GCCAGCG AAATC CGCTGGC TTTGTCAGTTTAGTT TERM 304 269273 - 269255 - f 90 -12.4 -3.54543 | opp_overlap 269255 269251 ATTTAGGCCCCCAAA GCCAGCGA AAT CCGCTGGC TTTGTCAGTTTAGTT Spea_0238 269451 - 269966 + | shikimate kinase I TERM 305 270077 - 270032 - g 73 -9.9 -3.32294 | gap 1, opp_overlap 270044 270046 TGAAATTGGCCAGAA TTTGTTTAGTAG-TAGCGAGCC ATT GGCTCGCTATCTTCAAAATAAA AACATACTAATCGTC TERM 306 270044 - 270064 + G 93 -15.5 -3.04144 | opp_overlap 270032, overlap 270046 GAATTTGTTTAGTAG TAGCGAGCC ATT GGCTCGCTA TCTTCAAAATAAAAA TERM 307 270046 - 270062 + G 85 -13.7 -3.07895 | opp_overlap 270032, overlap 270044 ATTTGTTTAGTAGTA GCGAGCC ATT GGCTCGC TATCTTCAAAATAAA Spea_0239 269970 - 271049 + | 3-dehydroquinate synthase Spea_0240 271213 - 272694 + | sporulation domain-containing protein Spea_0241 272749 - 273588 + | DNA adenine methylase Spea_0242 273822 - 273637 - | hypothetical protein Spea_0243 274172 - 273831 - | hypothetical protein Spea_0244 274371 - 275045 + | ribulose-phosphate 3-epimerase Spea_0245 275049 - 275747 + | phosphoglycolate phosphatase Spea_0246 275753 - 276763 + | tryptophanyl-tRNA synthetase TERM 308 276784 - 276802 + T 100 -14.6 -5.5074 | opp_overlap 276784 TGCGAGTTAATGAAA GCCAGCGA TAT TCGCTGGC TTTTTTGTTGGGTTA TERM 309 276802 - 276784 - T 100 -14.6 -3.93288 | opp_overlap 276784 TGCGAGTTAATGAAA GCCAGCGA TAT TCGCTGGC TTTTTTGTTGGGTTA Spea_0247 277699 - 276830 - | LysR family transcriptional regulator Spea_0248 277842 - 278726 + | hypothetical protein TERM 310 278704 - 278726 + T 77 -6.3 -4.50627 | opp_overlap 278704 TAAGACCAAAAAAAA TCATCGAGC AAAAG GCTGGATGA TTTCTTTAATCGCTG TERM 311 278726 - 278704 - T 100 -6.3 -5.94597 | opp_overlap 278704 TAAGACCAAAAAAAA TCATCGAGC AAAAG GCTGGATGA TTTCTTTAATCGCTG Spea_0249 279333 - 278764 - | transport-associated Spea_0250 279923 - 279330 - | phosphoheptose isomerase Spea_0251 280335 - 279997 - | hypothetical protein Spea_0252 282323 - 280449 - | LppC family lipoprotein Spea_0253 282426 - 283268 + | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 312 283728 - 283716 - T 70 -7.7 -3.7732 | GGCCTAGATGAATAA CTGTC CAC GACAG GACCCGGCTTATCGG TERM 313 283791 - 283770 - T 100 -10.1 -5.33848 | opp_overlap 283770 ATTACAAGTAAAAAA CCGCATCTC GCAA GGGATGCGG TTTTTGCTTTCTGCT TERM 314 283770 - 283791 + T 100 -12.3 -5.05505 | opp_overlap 283770 ATTACAAGTAAAAAA CCGCATCTC GCAA GGGATGCGG TTTTTGCTTTCTGCT TERM 315 283860 - 283881 + T 91 -6.5 -5.42514 | opp_overlap 283860 283859 CTATTCAAACAGAAG CCACATCTC GAAA GAGGTGCGG TTTTTTGCTTTCTGG TERM 316 283965 - 283942 - T 89 -9.6 -4.2123 | opp_overlap 283943, overlap 283943 CACCTATTTAAGAAA GCCCTCAACA GAAA TGTTGAGGGT TTTTTGTTATCTGTT TERM 317 283964 - 283943 - T 91 -13.1 -3.12256 | opp_overlap 283943, overlap 283942 ACCTATTTAAGAAAG CCCTCAACA GAAA TGTTGAGGG TTTTTTGTTATCTGT TERM 318 283943 - 283964 + T 100 -13.1 -5.62045 | opp_overlap 283943 283942 ACCTATTTAAGAAAG CCCTCAACA GAAA TGTTGAGGG TTTTTTGTTATCTGT Spea_0254 285322 - 284069 - | hypothetical protein TERM 319 285214 - 285226 + g 71 -6.9 -4.10657 | GCTGAGCCTCGAGTT GCTCG ATA CGGGC TTTTAACGCCTCTAG Spea_0255 286578 - 285322 - | glycine betaine/L-proline ABC transporter, ATPase subunit Spea_0256 287470 - 286571 - | binding-protein-dependent transport systems inner membrane component Spea_0257 288559 - 287555 - | substrate-binding region of ABC-type glycine betaine transport system TERM 320 288959 - 288997 + r 91 -10.6 -4.60487 | gap 1, opp_overlap 288944 288966, overlap 288966 CTTTTATATTGAACA TATAAAAGCCCGCTTAT CGAAAA ATAAGCGGGCTTT-ATG TTTTTAACCATCATC TERM 321 288966 - 288991 + r 100 -13.4 -4.55887 | opp_overlap 288966, overlap 288959 ATTGAACATATAAAA GCCCGCTTAT CGAAAA ATAAGCGGGC TTTATGTTTTTAACC TERM 322 288991 - 288966 - R 100 -14.1 -4.68545 | opp_overlap 288966 288959 ATTGAACATATAAAA GCCCGCTTATC GAAA AATAAGCGGGC TTTATGTTTTTAACC Spea_0258 290049 - 289108 - | LysR family transcriptional regulator Spea_0259 290648 - 291535 + | hypothetical protein Spea_0260 291532 - 292218 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 323 294157 - 294119 - g 76 -4.5 -4.9218 | TATTTATGACAAAAA GCTGACCTACAGTAAGT TGCCG ACTTTCCTTTGGCCAGC TACAAATGAAGCGGG Spea_0261 292227 - 294368 + | aldehyde ferredoxin oxidoreductase Spea_0262 294373 - 294726 + | hypothetical protein TERM 324 294736 - 294768 + F 85 -9.2 -4.21607 | overlap 294738 GACTAAAACAATATC TAGTATGGCCAAGC GTTAG GCTTGGTCATGCTC TTTATATTGGCTGGC TERM 325 294738 - 294766 + F 89 -11.8 -3.70511 | overlap 294736 CTAAAACAATATCTA GTATGGCCAAGC GTTAG GCTTGGTCATGC TCTTTATATTGGCTG Spea_0263 295190 - 295933 + | hypothetical protein TERM 326 296000 - 295975 - T 100 -15.5 -4.8143 | opp_overlap 295975 CTAATAACTCAAAAA GCCCGCCTATC GAAA GATAAGCGGGC TTAATTAGGTGGTCC TERM 327 295975 - 296000 + T 93 -13.3 -3.38316 | opp_overlap 295975 CTAATAACTCAAAAA GCCCGCCTATC GAAA GATAAGCGGGC TTAATTAGGTGGTCC Spea_0264 297299 - 296091 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Spea_0265 297718 - 299088 + | diguanylate cyclase Spea_0266 300001 - 299132 - | LysR family transcriptional regulator Spea_0267 300361 - 300918 + | glutathione-dependent formaldehyde-activating enzyme TERM 328 300986 - 300975 - f 83 -7.2 -4.7629 | opp_overlap 300975 CCAGTAATGCAAAAA GCGC TTCG GCGC TTTTTTTACATCTAT TERM 329 300975 - 300986 + F 93 -7.2 -5.51402 | opp_overlap 300975 CCAGTAATGCAAAAA GCGC TTCG GCGC TTTTTTTACATCTAT Spea_0268 301314 - 301580 + | hypothetical protein TERM 330 301624 - 301603 - f 93 -13.1 -3.36096 | opp_overlap 301600 301598, overlap 301598 ACTATAGAAAGTGAA GCTAAGCAG TACA CTGCTTAGC AACTACTTTAAGACA TERM 331 301770 - 301786 + F 77 -10.9 -2.85197 | overlap 301769 301772 TCTTTCCATACCCAC TACGGTG ACG CACCGTA ATTTAAAGTTTATTA Spea_0269 301818 - 302948 + | S-(hydroxymethyl)glutathione dehydrogenase TERM 332 302964 - 302989 + F 100 -12.7 -4.59853 | opp_overlap 302964 302967 302970 CATCATTGTCTAAAA TAACAAGCGCT CTCT GGCGCTTGTTA TTTTTAAAGGCTTAA TERM 333 302989 - 302964 - f 91 -12 -4.10161 | opp_overlap 302964, overlap 302967 302970 CATCATTGTCTAAAA TAACAAGCGC TCTCTG GCGCTTGTTA TTTTTAAAGGCTTAA TERM 334 302986 - 302967 - f 85 -9.3 -4.17762 | opp_overlap 302964, overlap 302964 302970 CATTGTCTAAAATAA CAAGCGC TCTCTG GCGCTTG TTATTTTTAAAGGCT Spea_0270 303077 - 303916 + | S-formylglutathione hydrolase TERM 335 303979 - 303962 - f 74 -9.1 -3.4678 | opp_overlap 303962 ATTCCGACACGAGAA GCTGCCC ACCA AGGCAGC TTTTTTTATTGCTAA TERM 336 303962 - 303979 + F 100 -8.4 -5.84381 | opp_overlap 303962 ATTCCGACACGAGAA GCTGCC CACCAA GGCAGC TTTTTTTATTGCTAA Spea_0271 304145 - 304471 + | small multidrug resistance protein TERM 337 304495 - 304529 + T 100 -17.3 -4.91873 | opp_overlap 304500, overlap 304500 TAATGAATCAAAAAT AAAAAGCCCGCAAGC TTAGC GCTTGCGGGCTTTTA TTTTTGATTCATCTA TERM 338 304500 - 304524 + T 100 -17.2 -5.34655 | opp_overlap 304500, overlap 304495 AATCAAAAATAAAAA GCCCGCAAGC TTAGC GCTTGCGGGC TTTTATTTTTGATTC TERM 339 304524 - 304500 - T 100 -17.2 -5.67529 | opp_overlap 304500 304495 AATCAAAAATAAAAA GCCCGCAAGC TTAGC GCTTGCGGGC TTTTATTTTTGATTC Spea_0272 305261 - 304614 - | hypothetical protein TERM 340 305361 - 305337 - R 72 -8.5 -3.55604 | overlap 305335 CTAGCTAATGAAATA GCCAGTGAGCT GGA AGCCCACAAGC ATTACGCCGGCGCTC Spea_0273 306017 - 305322 - | hypothetical protein Spea_0274 306620 - 306153 - | hypothetical protein TERM 341 306276 - 306310 + g 70 -9.3 -3.46482 | overlap 306273 TACAGGTATATCTGA CGGTGTATGGCCATG ATTGG CATGGTCATGTTCCG TTAATTGATTAGGTT TERM 342 306569 - 306548 - G 74 -3.7 -5.04597 | opp_overlap 306549, overlap 306549 ACTGACACACAAAAA GCATTAGCA TGAT TGCCAATGT TGATTTTGAATGTTG TERM 343 307100 - 307125 + G 79 -8.3 -4.34345 | gap 1, opp_overlap 307100, overlap 307101 307123 GGCTTATTGGTAACA TCCACTCTCGGC AAG GTCGAG-GTGGG TTTTGATACTGTCTC TERM 344 307101 - 307124 + G 71 -9.6 -3.19884 | gap 1, opp_overlap 307100, overlap 307100 307123 GCTTATTGGTAACAT CCACTCTCGGC AAG GTCGAG-GTGG GTTTTGATACTGTCT Spea_0275 306836 - 307255 + | hypothetical protein TERM 345 307325 - 307344 + T 91 -6.4 -5.42131 | opp_overlap 307325 TCGGCCAGCATTTAA GCCTCTCA TTTA TTAGAGGC TTTTTTATATAGTTC Spea_0276 309118 - 307433 - | hypothetical protein TERM 346 307662 - 307642 - G 72 -5.3 -4.61231 | overlap 307644 CCACATCGGTAAAAA TTGCCCAGC CGA GCTCGGCTA ACTGATACAGATTGA TERM 347 309245 - 309228 - R 90 -9.1 -5.08601 | opp_overlap 309228 TTAGCCTAATAAAAA GAGCGCC TATA AGCGCTC TTTTTCGGTATTGAT TERM 348 309228 - 309245 + r 88 -8.4 -4.75308 | opp_overlap 309228 TTAGCCTAATAAAAA GAGCGC CTATAA GCGCTC TTTTTCGGTATTGAT Spea_0277 310493 - 309273 - | hypothetical protein Spea_0278 310696 - 311106 + | hypothetical protein TERM 349 311199 - 311213 + F 81 -5.7 -5.14563 | opp_overlap 311199 GCTATACTAAAAAAA GCATC AAATC GATGC TTTTTTAGTCACACC TERM 350 311213 - 311199 - f 95 -6.4 -5.58454 | opp_overlap 311199 GCTATACTAAAAAAA GCATCA AAT CGATGC TTTTTTAGTCACACC TERM 351 311232 - 311244 + F 72 -9.1 -3.41051 | TTTAGTCACACCTTG CAGGC GGA GCCTG TTATACTCCGCGTCC TERM 352 312324 - 312310 - g 79 -9.2 -4.13767 | opp_overlap 312308 312310 TGCGCTATTTCAAAA GCACGC CGA GCGCGC TATTTGGGTTAATCC TERM 353 313637 - 313627 - g 87 -6.8 -5.10461 | overlap 313628 TCCACCTAAGAAAAA TGCC TGG GGCA CCACGCCTAAGCATC Spea_0279 311327 - 313660 + | hypothetical protein TERM 354 313797 - 313832 + F 79 -4.8 -5.15634 | opp_overlap 313797 AATAAACTAAAATGA GGGAATATCTTATACT GATT GGTATTAAGTATTCCC TTTTTTAATGGGCTC TERM 355 314184 - 314157 - g 100 -9.1 -5.1925 | opp_overlap 314157 TGATAACGTAAAAAA CCAAGCCGCCG AGAAAA CAGCAGCCTGG TTTGATTAGTAGGTT Spea_0280 313840 - 314193 + | hypothetical protein Spea_0281 315161 - 314232 - | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TERM 356 315119 - 315101 - G 71 -3.8 -4.84262 | overlap 315105 TAATAATTAATAAAA CACACCAA TAT TTGGGATG TAGCATTGCTAGTGA Spea_0282 315351 - 315935 + | hypothetical protein TERM 357 316023 - 316072 + T 71 -7.1 -3.82811 | gap 1, opp_overlap 316034, overlap 316028 GACTTATCTTCTCTC GCAGTGACGAAGTCACGTCTTCGT AGG GCGAAGCCC-GACCTCGTCTTTGC TTTAACTCTTTGCTT Spea_0283 316676 - 316110 - | hypothetical protein TERM 358 316780 - 316803 + r 83 -9.6 -3.85704 | opp_overlap 316785, overlap 316785 ATACTAAAGGCAAGG TAAAAGCGCC AATA GGCGCTTTTC TTTGATGGTTAATCA TERM 359 316798 - 316785 - R 89 -9.5 -4.30448 | opp_overlap 316780 316785 AAAGGCAAGGTAAAA GCGCC AATA GGCGC TTTTCTTTGATGGTT TERM 360 316785 - 316798 + r 93 -9.5 -4.96388 | opp_overlap 316785, overlap 316780 AAAGGCAAGGTAAAA GCGCC AATA GGCGC TTTTCTTTGATGGTT Spea_0284 318895 - 316835 - | peptidase S9 prolyl oligopeptidase TERM 361 318865 - 318842 - G 73 -7.4 -4.09685 | gap 1, opp_overlap 318864 CGCCATGGCGGAAAA GCTGCTGC-CT ATC AGCGCGGCAGC GAGCAGAGAAAGCTT Spea_0285 319958 - 319053 - | hypothetical protein Spea_0286 322765 - 320108 - | histidine kinase Spea_0287 322868 - 323368 + | hypothetical protein TERM 362 324376 - 324395 + G 74 -3.6 -4.91977 | gap 1, overlap 324380 AGTGCAGATGTAGAC CTGATGACT CTA AG-CGTCAG TTTTGTCTTTTAATG Spea_0288 323371 - 324408 + | hypothetical protein Spea_0289 324408 - 324668 + | hypothetical protein Spea_0290 325642 - 324686 - | hypothetical protein Spea_0291 327178 - 325724 - | hypothetical protein TERM 363 326464 - 326488 + g 72 -4.9 -4.66609 | overlap 326464 326461 TTGCACGTTCTAACT GCCAGCTATCT TGT AGCTGGCTGAC TTTTTCGGTGAACTG TERM 364 326464 - 326484 + g 77 -11.9 -2.85361 | overlap 326461 326464 TTGCACGTTCTAACT GCCAGCTAT CTT GTAGCTGGC TGACTTTTTCGGTGA TERM 365 327147 - 327137 - G 73 -4 -4.85782 | CGCGCTAAAAAGAAA TAAC CAA GTTA GACAATACCTAAGCA Spea_0292 327524 - 327198 - | hypothetical protein Spea_0293 328862 - 327573 - | hypothetical protein Spea_0294 330052 - 329048 - | hypothetical protein Spea_0295 331430 - 330042 - | hypothetical protein TERM 366 330447 - 330436 - G 70 -2.2 -4.99043 | GCGTCATAAACAAAA TAGG GTTC CCCA GAAACAACATGTTCA Spea_0296 332847 - 331453 - | hypothetical protein Spea_0297 334183 - 332858 - | hypothetical protein Spea_0298 336026 - 334170 - | cellulose synthase (UDP-forming) Spea_0299 336519 - 336076 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Spea_0300 337725 - 336532 - | nucleotidyl transferase TERM 367 336577 - 336604 + g 74 -5.6 -4.68593 | TGTTGCTGGAGTACT CAGTGCTAAATA AATA TCTTCAGCACTG TTTTTAGCTAATAGG Spea_0301 338071 - 337739 - | anti-sigma-factor antagonist Spea_0302 339288 - 338086 - | response regulator receiver modulated serine phosphatase TERM 368 339526 - 339501 - R 82 -10.7 -3.49653 | opp_overlap 339501, overlap 339507 AGCAGTGCTATATAA CTATAAGATTT AGCT AAATCTTATAG TTTTTCGAGTTTGAT TERM 369 339501 - 339526 + r 93 -10.7 -4.71482 | opp_overlap 339501 339507 AGCAGTGCTATATAA CTATAAGATTT AGCT AAATCTTATAG TTTTTCGAGTTTGAT Spea_0303 339913 - 339521 - | hypothetical protein Spea_0304 340442 - 343084 + | TonB-dependent receptor TERM 370 343869 - 343848 - g 82 -11.7 -3.36054 | opp_overlap 343846, overlap 343846 343837 TAAACGGACACAACA TGCTGTTTG TTAT CAAACAGCA AATCTATGCCGATAC Spea_0305 343190 - 345226 + | diguanylate phosphodiesterase TERM 371 345998 - 346016 + G 82 -7.5 -4.63542 | overlap 345993 TACGGTGCAGGTCTA TCTCAAG ACTAC CTTGAGA TTTTTGCAGCTTATG Spea_0306 345407 - 346249 + | hypothetical protein TERM 372 346309 - 346340 + F 93 -7.3 -5.47159 | opp_overlap 346309 GTATTGGTTAGCAAA GGCGAACTCCTGA CTTGCA TTGGGACTTCGCC TTTTTATTTATTAAG Spea_0307 346417 - 346680 + | hypothetical protein TERM 373 346957 - 346971 + G 71 -10 -3.29649 | ACAGGTCTACAGCGG CCACCA GTT TGGTGG TTACTCTCCTCAACT Spea_0308 346748 - 348199 + | hypothetical protein Spea_0309 348231 - 348527 + | hypothetical protein Spea_0310 348616 - 349644 + | serine/threonine protein kinase Spea_0311 349770 - 350381 + | DSBA oxidoreductase TERM 374 350390 - 350428 + F 100 -17.1 -3.91911 | gap 1, opp_overlap 350401, overlap 350401 AAAGTAATTTGCAGC TGCATAAAAAA-GGAGCC TAAT GGCTCCTTTTTTTATGCA TTTGATTGCCATAGA TERM 375 350401 - 350416 + F 100 -10.4 -5.68039 | opp_overlap 350401, overlap 350390 CAGCTGCATAAAAAA GGAGCC TAAT GGCTCC TTTTTTTATGCATTT TERM 376 350416 - 350401 - f 100 -10.4 -5.252 | opp_overlap 350401 350390 CAGCTGCATAAAAAA GGAGCC TAAT GGCTCC TTTTTTTATGCATTT TERM 377 350559 - 350545 - f 71 -5 -4.61916 | ACAAAAAACAAATAA CAACAA AGG TTGTCG GGAGGGTCTTATGAG TERM 378 350724 - 350703 - g 100 -10.9 -5.07486 | opp_overlap 350701 350703, overlap 350678 TACTGCCAAGAAAAA GCCTGCCTA AAAT TAAGCAGGC TATTTTAGAGCTCAA Spea_0312 350570 - 350782 + | hypothetical protein Spea_0313 350999 - 350796 - | hypothetical protein Spea_0314 351180 - 352661 + | Na+/H+ antiporter NhaC TERM 379 352674 - 352731 + T 85 -6.6 -5.06414 | gap 3, opp_overlap 352683 352687, overlap 352681 352683 352687 TAAGAAGTGAGTTAC TGCATA--GC-ATAAAGCCGCCAACTAAC TCA GGTAGTTGGCGGCTTTATTGTTTTAAGCG TTTTTCTTACAAGCG TERM 380 352681 - 352722 + T 100 -18.3 -4.20883 | gap 1, opp_overlap 352683 352687, overlap 352674 352683 352687 TGAGTTACTGCATAG C-ATAAAGCCGCCAACTAAC TCA GGTAGTTGGCGGCTTTATTG TTTTAAGCGTTTTTC TERM 381 352683 - 352719 + T 100 -21.1 -4.2018 | opp_overlap 352683 352687, overlap 352681 352674 352687 AGTTACTGCATAGCA TAAAGCCGCCAACTAAC TCA GGTAGTTGGCGGCTTTA TTGTTTTAAGCGTTT TERM 382 352719 - 352683 - T 100 -21.1 -2.63715 | opp_overlap 352683 352681 352674 352687, overlap 352687 AGTTACTGCATAGCA TAAAGCCGCCAACTAAC TCA GGTAGTTGGCGGCTTTA TTGTTTTAAGCGTTT TERM 383 352687 - 352715 + T 100 -17.5 -4.67697 | opp_overlap 352683 352687, overlap 352683 352681 352674 ACTGCATAGCATAAA GCCGCCAACTAAC TCA GGTAGTTGGCGGC TTTATTGTTTTAAGC TERM 384 352715 - 352687 - T 100 -17.5 -4.01888 | opp_overlap 352687 352683 352681 352674, overlap 352683 ACTGCATAGCATAAA GCCGCCAACTAAC TCA GGTAGTTGGCGGC TTTATTGTTTTAAGC TERM 385 352763 - 352744 - T 70 -8.6 -3.28712 | gap 1 GCGTTTTTCTTACAA GCGGC-TCT TTT AGAGGCCGC AGCGCTTAGAAACGG Spea_0315 353389 - 352769 - | hypothetical protein TERM 386 353591 - 353609 + H 70 -8.2 -3.75024 | AATAAGTCGAACAGG CTTGTCAT CTA ATGGCAAG TTATTCGTCGTCGAG TERM 387 354402 - 354383 - g 84 -5 -5.31456 | gap 1 CGAAGTGATAAAAAA TGCCAGCCA CAG TGGC-AGCA GTAAAGGCATTATGG Spea_0316 353631 - 354974 + | phospholipase TERM 388 355275 - 355291 + G 100 -10.9 -5.72622 | TTACTTCTATTTTGA CAGCACT ATT AGTGCTG TTTTTTATTTCTCCG TERM 389 355461 - 355473 + G 74 -5.5 -4.66953 | overlap 355462 ATCAACCTTTAGTTG TCGAC TCC GTCGG TTTTTCAGGTCTTCC Spea_0317 355250 - 356146 + | hypothetical protein Spea_0318 356147 - 357073 + | alpha/beta hydrolase fold Spea_0319 357070 - 358371 + | hypothetical protein Spea_0320 358368 - 359618 + | hypothetical protein TERM 390 359669 - 359640 - T 83 -12.3 -2.81768 | opp_overlap 359641 359647, overlap 359647 GCATAGCAGTGAAAG CTAAAAAGGGCTC ATTT GAGCCCTTTTTAT TTAACGAATAAGCTT TERM 391 359641 - 359668 + T 100 -15.8 -3.55563 | opp_overlap 359640 359647, overlap 359647 CATAGCAGTGAAAGC TAAAAAGGGCTC ATTT GAGCCCTTTTTA TTTAACGAATAAGCT TERM 392 359662 - 359647 - T 93 -10.4 -4.81851 | opp_overlap 359641 359647, overlap 359640 AGTGAAAGCTAAAAA GGGCTC ATTT GAGCCC TTTTTATTTAACGAA TERM 393 359647 - 359662 + T 100 -10.4 -5.27335 | opp_overlap 359647 359640, overlap 359641 AGTGAAAGCTAAAAA GGGCTC ATTT GAGCCC TTTTTATTTAACGAA Spea_0321 360426 - 359683 - | cupin 2 domain-containing protein Spea_0322 361692 - 360604 - | hypothetical protein Spea_0323 363105 - 361966 - | hypothetical protein Spea_0324 363521 - 363153 - | tetraheme cytochrome c, putative Spea_0325 365044 - 363521 - | flavocytochrome c TERM 394 365166 - 365139 - H 84 -10 -3.91897 | opp_overlap 365139 TTTTTCAGTGACAAA TTTATTCGTGAG TCAG CTCTCGAATAAA TTTTTTCTTAAAAAA TERM 395 365139 - 365166 + H 100 -10 -5.4505 | opp_overlap 365139 TTTTTCAGTGACAAA TTTATTCGTGAG TCAG CTCTCGAATAAA TTTTTTCTTAAAAAA Spea_0326 365389 - 366180 + | TetR family transcriptional regulator TERM 396 366223 - 366205 - f 90 -7.4 -5.19879 | TTTTAAATATAAAAA GCCCTTAT TTA ATGAGGGC TGGCATCGTCATTCT TERM 397 366652 - 366628 - g 73 -4.1 -4.87665 | opp_overlap 366634, overlap 366629 CCGTATCGATAAAAA TGCCGAGCGCT TAA ATCGCTCTGCT GACATTTTGTGTATT Spea_0327 366353 - 367444 + | branched-chain amino acid aminotransferase TERM 398 367475 - 367490 + T 91 -8.2 -5.24129 | opp_overlap 367465 367475 CCAAACCCTGCAGAA GGCTCC TTAT GGGGCC TTTTTTATGGGGGGC TERM 399 367499 - 367523 + T 71 -6.3 -4.13945 | TGGGGCCTTTTTTAT GGGGGGCTCTT TTT AAGCGCCACTC TTTTACAGTGCAGCT Spea_0328 367940 - 367542 - | hypothetical protein TERM 400 368220 - 368177 - R 79 -9 -3.79668 | opp_overlap 368174 ATTTAATTGACGAAA GCTGGAACTGAATAGGGA GTTTGGCT TACCTATTCAGCTGCAGC TCGGGTTTTACTGAT Spea_0329 369178 - 368228 - | phospholipid/glycerol acyltransferase Spea_0330 370091 - 369186 - | phospholipid/glycerol acyltransferase TERM 401 370066 - 370053 - G 73 -2.3 -5.25799 | AAAATAACAGAAAAA GGCGA AACT TCCCC TAATGCGTGACACTA TERM 402 370294 - 370257 - R 100 -14.3 -3.46509 | gap 1, overlap 370251 GCTGAATAATACTAA CTGCGCCAAGCCCCAGCA TAT TGCTAGGGCTTAG-ACAG AGTGAAATGGTTAAT Spea_0331 371834 - 370305 - | EAL domain-containing protein Spea_0332 373667 - 372147 - | Mg chelatase, subunit ChlI TERM 403 374120 - 374093 - H 72 -8.4 -3.53012 | overlap 374097 TCCTGCCCCGCGAAA GCTACGCCGACA TCCC TGTCGGCATCAC GCAATTTGTTCCAAC TERM 404 374116 - 374097 - H 72 -10 -2.64155 | overlap 374093 GCCCCGCGAAAGCTA CGCCGACA TCCC TGTCGGCA TCACGCAATTTGTTC Spea_0333 374320 - 376035 + | KAP P-loop domain-containing protein TERM 405 376162 - 376152 - T 70 -8.2 -3.76224 | GTTTCAGGGATGAAA CCGC AGA GCGG CTAGGGATGGCGTAA TERM 406 376814 - 376839 + T 79 -10.5 -3.51232 | opp_overlap 376834 ATGAAGCCAAAGGTT CGCATGCTTTA GATT TAAAGCCTGCG TTAGTTTCACGCAAA Spea_0334 378122 - 376866 - | histidine kinase TERM 407 378075 - 378052 - GT 93 -11.8 -3.7795 | gap 1, overlap 378042 GCAAAGGTCATCAAA CCG-AAGCTCC AAC GGAGCTTGCGG TAGATGCTCGGGAAC Spea_0335 378762 - 378094 - | two component transcriptional regulator Spea_0336 378856 - 380070 + | hypothetical protein TERM 408 380101 - 380132 + F 86 -11 -3.86346 | opp_overlap 380107, overlap 380107 TCGAACTGATTGATT CTAGAATGCCTTTC TCAC GAAAGGCATTTTTG TTTCTGAACGGCTGA TERM 409 380126 - 380107 - f 80 -10.8 -3.33492 | opp_overlap 380101 380107 TGATTGATTCTAGAA TGCCTTTC TCAC GAAAGGCA TTTTTGTTTCTGAAC TERM 410 380107 - 380126 + F 100 -10.8 -5.38054 | opp_overlap 380107, overlap 380101 TGATTGATTCTAGAA TGCCTTTC TCAC GAAAGGCA TTTTTGTTTCTGAAC TERM 411 380798 - 380811 + G 73 -4.5 -4.78237 | gap 1, overlap 380791 TGAGAACTCGCTTGT GGCAGC GCA GC-GCC TTTTGTTATGGCATC Spea_0337 380368 - 381921 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 412 381937 - 381971 + T 77 -10.2 -3.33744 | opp_overlap 381937 381943, overlap 381943 TGGGATTAGTTTAAA TAGAAAGGGTCTAG CCGAGTA CTAGGCCCTTTTTA GTTTTTGGGGAAACA TERM 413 381943 - 381965 + T 89 -7 -5.18355 | opp_overlap 381937 381943, overlap 381937 TAGTTTAAATAGAAA GGGTCTAG CCGAGTA CTAGGCCC TTTTTAGTTTTTGGG TERM 414 381965 - 381943 - T 70 -5.5 -4.33928 | opp_overlap 381943 381937, overlap 381937 TAGTTTAAATAGAAA GGGTCTAGC CGAGT ACTAGGCCC TTTTTAGTTTTTGGG TERM 415 382066 - 382032 - T 93 -13.1 -3.39068 | opp_overlap 382037, overlap 382037 CTATTGTAAGAAAAT GAAAAGGTGTTTAGC GATTG GCTAAACACCTTTTT TATTGCAGTGGGGGA TERM 416 382061 - 382037 - T 100 -13 -4.78029 | opp_overlap 382037, overlap 382032 GTAAGAAAATGAAAA GGTGTTTAGC GATTG GCTAAACACC TTTTTTATTGCAGTG TERM 417 382037 - 382061 + T 100 -13 -5.46657 | opp_overlap 382037 382032 GTAAGAAAATGAAAA GGTGTTTAGC GATTG GCTAAACACC TTTTTTATTGCAGTG Spea_0338 383764 - 382112 - | phenylalanine/histidine ammonia-lyase Spea_0339 384142 - 383792 - | cytochrome c Spea_0340 385644 - 384142 - | flavocytochrome c Spea_0341 385905 - 386753 + | LysR family transcriptional regulator TERM 418 387779 - 387795 + G 75 -6.5 -4.41047 | overlap 387780 CTGCAGCGTGATGTA GCGGTCA ACA TGACCGA TTTTAATTGCGCAAT TERM 419 387780 - 387794 + G 71 -10 -3.24146 | overlap 387779 TGCAGCGTGATGTAG CGGTCA ACA TGACCG ATTTTAATTGCGCAA Spea_0342 387020 - 388027 + | LysR family transcriptional regulator TERM 420 388116 - 388058 - T 95 -15 -2.71937 | gap 1, opp_overlap 388063 388065, overlap 388063 388065 AAAGATAAGAATGGA CCACAGAGGACACGAAGAAAAGCAA TCCCGAGCTT TTTCTCTTCTTCGTGTCCTCTGT-G TAGCAAACGGAGTGA TERM 421 388063 - 388112 + T 83 -12.4 -2.87132 | opp_overlap 388058 388063 388065, overlap 388065 TAAGAATGGACCACA GAGGACACGAAGAAAAGCAA TCCCGAGCTT TTTCTCTTCTTCGTGTCCTC TGTGTAGCAAACGGA TERM 422 388112 - 388063 - T 95 -14.6 -2.84619 | opp_overlap 388063 388065, overlap 388058 388065 TAAGAATGGACCACA GAGGACACGAAGAAAAGCAA TCCCGAGCTT TTTCTCTTCTTCGTGTCCTC TGTGTAGCAAACGGA TERM 423 388110 - 388065 - T 81 -11.4 -2.96538 | opp_overlap 388063 388065, overlap 388063 388058 AGAATGGACCACAGA GGACACGAAGAAAAGCAA TCCCGAGCTT TTTCTCTTCTTCGTGTCC TCTGTGTAGCAAACG Spea_0343 389097 - 388225 - | DNA-binding transcriptional regulator IlvY Spea_0344 389278 - 390759 + | ketol-acid reductoisomerase TERM 424 391210 - 391187 - f 100 -16 -4.66953 | opp_overlap 391187 TTAAGATTGCAAAAA CCCCCGCTCC GAAA GGAACGGGGG TTTTTTCGTATAAGG TERM 425 391187 - 391210 + F 100 -13.8 -5.21709 | opp_overlap 391187 TTAAGATTGCAAAAA CCCCCGCTCC GAAA GGAACGGGGG TTTTTTCGTATAAGG Spea_0345 391294 - 393003 + | acetolactate synthase 2 catalytic subunit TERM 426 393135 - 393147 + G 76 -9.1 -3.75738 | CCAGAAGTGTTAGAG CGCGT GCT ACGCG TTGTTCGTCATCGTG TERM 427 393231 - 393208 - g 75 -9.6 -3.49169 | overlap 393206 TCAATAGCAATAACA GCACTAGCAT CGAC ATGCTGGTGC ACAGCGAGCGTGAAA Spea_0346 393081 - 393347 + | amino acid-binding ACT domain-containing protein Spea_0347 393352 - 394281 + | branched-chain amino acid aminotransferase Spea_0348 394506 - 396353 + | dihydroxy-acid dehydratase Spea_0349 396382 - 397932 + | threonine dehydratase TERM 428 397963 - 397987 + F 100 -8.5 -5.71712 | TAGTCGTTTAAAGTG GGCAGCAGAGA TTT TCGATGCTGCC TTTTTTTATCTGCGA Spea_0350 398269 - 399405 + | Serine--pyruvate transaminase TERM 429 399466 - 399495 + T 100 -20.9 -4.08216 | opp_overlap 399466 399470, overlap 399470 AGTCGGATTAATAAA CAAAGACCCCAGC TTAA GCTGGGGTCTTTG TTTTAAAAGCGATAA TERM 430 399495 - 399466 - T 100 -20.9 -4.2461 | opp_overlap 399466 399470, overlap 399470 AGTCGGATTAATAAA CAAAGACCCCAGC TTAA GCTGGGGTCTTTG TTTTAAAAGCGATAA TERM 431 399470 - 399491 + T 100 -15.9 -4.64861 | opp_overlap 399466 399470, overlap 399466 GGATTAATAAACAAA GACCCCAGC TTAA GCTGGGGTC TTTGTTTTAAAAGCG TERM 432 399491 - 399470 - T 100 -15.9 -4.70887 | opp_overlap 399470 399466, overlap 399466 GGATTAATAAACAAA GACCCCAGC TTAA GCTGGGGTC TTTGTTTTAAAAGCG Spea_0351 401622 - 399637 - | TonB-dependent copper receptor TERM 433 400686 - 400717 + g 88 -12.4 -3.61764 | gap 1, opp_overlap 400678 CCCAAAGGTGGCCGC CTTGGGTGCC-ACGT CTA ACGTTGGTACCCGAG TTTACGCCTTGGTCG TERM 434 401784 - 401768 - R 100 -12.3 -5.64274 | opp_overlap 401768 TTACGTATAAAAAAA GGGCGAT AAA ATCGCCC TTCTTAACAGTGAGT TERM 435 401768 - 401784 + r 90 -12.3 -3.63694 | opp_overlap 401768 TTACGTATAAAAAAA GGGCGAT AAA ATCGCCC TTCTTAACAGTGAGT Spea_0352 403190 - 401814 - | sodium:neurotransmitter symporter TERM 436 403044 - 403064 + g 73 -10.3 -3.05384 | opp_overlap 403042 AACAAGCAAGAATGC GCCGCCGCC GTG GGTGGCCGC TTGAGTGGGGAAGCC TERM 437 403574 - 403551 - R 71 -6 -4.27584 | opp_overlap 403551 403550 403553 ACTGCTAATTCAAAA GAGCACTCAT TTAA AGGAGTACTC GTTTAAAGGGGTCCT Spea_0353 404107 - 403619 - | AsnC family transcriptional regulator Spea_0354 404966 - 404214 - | phosphoesterase PA-phosphatase related Spea_0355 405421 - 406278 + | hypothetical protein TERM 438 406310 - 406329 + T 79 -3.6 -5.48825 | opp_overlap 406310 CAAAAAACAAAAAAA GAGCAT GGTTTATG ATGCTC TTTTTTTGGCTACTA TERM 439 406329 - 406310 - T 100 -3.6 -6.28401 | opp_overlap 406310 CAAAAAACAAAAAAA GAGCAT GGTTTATG ATGCTC TTTTTTTGGCTACTA Spea_0356 406608 - 406354 - | hypothetical protein TERM 440 406742 - 406760 + r 86 -10.3 -4.11275 | opp_overlap 406742 TTGGGTAATAAAAAA GCCTGCT ATTGC AGCAGGC TTTGGTTTAGGTTGT TERM 441 406760 - 406742 - R 100 -11 -5.4505 | opp_overlap 406742 TTGGGTAATAAAAAA GCCTGCTA TTG CAGCAGGC TTTGGTTTAGGTTGT Spea_0357 409892 - 406800 - | acriflavin resistance protein Spea_0358 411026 - 409908 - | RND family efflux transporter MFP subunit TERM 442 410927 - 410938 + g 76 -4.4 -5.01811 | CAGGCATATTGGCAA TTGC ATCG GCAA TTTTTCCTTTAATAA Spea_0359 411653 - 411042 - | TetR family transcriptional regulator TERM 443 411458 - 411477 + g 73 -7.9 -4.03586 | AGAGTACGTCTTTTC TGAGCTC TAAGAT GAGCTCA TTCTTATCTTTGAAA TERM 444 411652 - 411635 - G 85 -7.1 -4.93316 | opp_overlap 411635 TAATAATATCAAAAA TGAATGA ACGT TCATTCA TTAGTTTAATGTCAG Spea_0360 411859 - 413874 + | ATP-dependent DNA helicase Rep TERM 445 413891 - 413923 + T 89 -5.5 -5.4433 | opp_overlap 413891, overlap 413893 GCTTGTTTCTTAAAG CTGGGTATTGGCTTA AAT TAGGCACATACCCTG TTTTTGTTTGTCTCT TERM 446 413893 - 413921 + T 76 -6.7 -4.33302 | opp_overlap 413891, overlap 413891 TTGTTTCTTAAAGCT GGGTATTGGCTTA AAT TAGGCACATACCC TGTTTTTGTTTGTCT Spea_0361 416529 - 413908 - | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 447 416150 - 416168 + g 87 -10.4 -4.08767 | opp_overlap 416152 416154 TAGGTTTCATCATCA CAGATCAA TGT TTGATCTG TTTTGAGCACGTAGC TERM 448 416679 - 416661 - R 71 -6.8 -3.98009 | AGAAAACCGTACAAA TTACTCAA TTC TTGAGCAA ACGAGCGGGAAATGG TERM 449 417245 - 417224 - R 100 -14.5 -5.252 | opp_overlap 417224 CATTTTTACAAAAAA GCCTCTCGA GAAA TCGAGAGGC TTTTTTGTTTTTTAA TERM 450 417224 - 417245 + r 100 -14.5 -6.04324 | opp_overlap 417224 CATTTTTACAAAAAA GCCTCTCGA GAAA TCGAGAGGC TTTTTTGTTTTTTAA TERM 451 417473 - 417487 + r 95 -11.4 -4.78326 | opp_overlap 417473 CCTAAAAATAAAAAA GGCCTC TGA GAGGCC TTTGTTTGTTTCAGC TERM 452 417487 - 417473 - R 100 -11.4 -5.93252 | opp_overlap 417473 CCTAAAAATAAAAAA GGCCTC TGA GAGGCC TTTGTTTGTTTCAGC Spea_0362 419450 - 417531 - | diguanylate cyclase/phosphodiesterase Spea_0363 420165 - 419458 - | hypothetical protein Spea_0364 420789 - 420184 - | OmpA/MotB domain-containing protein Spea_0365 422213 - 420786 - | TolC family type I secretion outer membrane protein Spea_0366 423630 - 422248 - | HlyD family type I secretion membrane fusion protein Spea_0367 425804 - 423627 - | ABC transporter related TERM 453 424610 - 424630 + g 71 -3.9 -4.80853 | GCACCACAAACGTCG CCACATTGG TCA CTGACGTGG TTATTTTTTTGCACT TERM 454 425853 - 425884 + r 83 -12.5 -2.87259 | opp_overlap 425857, overlap 425850 425855 425858 TTATTTAGTATCGAT CATAGTGACCTGT TTTGCC ACAGGTCATTATG TAGTCTCTTTTAGTT TERM 455 425858 - 425879 + r 72 -8.8 -3.60782 | opp_overlap 425857, overlap 425855 425853 425850 TAGTATCGATCATAG TGACCTGT TTTGCC ACAGGTCA TTATGTAGTCTCTTT Spea_0368 442232 - 425898 - | cadherin TERM 456 429796 - 429775 - G 72 -8.7 -3.76767 | opp_overlap 429778, overlap 429773 429778 TTAACAAGAGAAACA GAACCACCG AGAG CAGTGGTCC CTTCAAAACTTATGC TERM 457 442427 - 442391 - R 73 -6.8 -4.15788 | gap 1, opp_overlap 442396 442400, overlap 442396 442400 AAGGGGGGGAATAAA TATGACAAAGACCACTA GATA TAGTGGCCTTTGTT-TA AGTACTTACTAATTA TERM 458 442396 - 442423 + r 88 -11.4 -3.72241 | opp_overlap 442391 442396 442400, overlap 442400 GGGGAATAAATATGA CAAAGACCACTA GATA TAGTGGCCTTTG TTTAAGTACTTACTA TERM 459 442423 - 442396 - R 93 -13.6 -2.94561 | opp_overlap 442396 442400, overlap 442391 442400 GGGGAATAAATATGA CAAAGACCACTA GATA TAGTGGCCTTTG TTTAAGTACTTACTA TERM 460 442419 - 442400 - R 79 -8.6 -4.12941 | opp_overlap 442396 442400, overlap 442396 442391 AATAAATATGACAAA GACCACTA GATA TAGTGGCC TTTGTTTAAGTACTT TERM 461 442400 - 442419 + r 74 -6.4 -4.47786 | opp_overlap 442400 442396 442391, overlap 442396 AATAAATATGACAAA GACCACTA GATA TAGTGGCC TTTGTTTAAGTACTT Spea_0369 448674 - 442471 - | putative outer membrane adhesin like proteiin TERM 462 448571 - 448600 + g 70 -4.9 -4.53398 | overlap 448569 TGTTTTAAGGTGTCA CCAAGGCGAAGTT TTAC ATCATCTCCTTGG TTGTTTTTGGTATTG TERM 463 448932 - 448914 - R 100 -5.9 -5.95539 | CGCTAAATAAAAAAA GGCCGCC AAAAA GACGACC TTTAGTTTAAAAAAG Spea_0370 450125 - 448956 - | HemY domain-containing protein TERM 464 449851 - 449879 + g 70 -2.4 -5.02476 | overlap 449855 TCCGCTAACGCTAGT GCGCCAAGAAGG GTGTG TTTTCTTGCTGC TTTTTTGCGCCATCT TERM 465 450086 - 450070 - G 84 -8 -4.77165 | CTGCCCACAAGAAAA GGACTG ATGCA CAGTCC TAATAAGATAATGAC Spea_0371 451318 - 450125 - | protein of unknown function DUF513 hemX TERM 466 450369 - 450353 - G 82 -10.9 -3.54653 | opp_overlap 450364, overlap 450358 ATCTTGACGATACAA TGCAAGC TGG GCTTGCA GCAGTTTATTGCGAG Spea_0372 452111 - 451380 - | uroporphyrinogen III synthase HEM4 TERM 467 452069 - 452104 + g 72 -5.5 -4.45151 | opp_overlap 452073, overlap 452028 TCAACGCCTCTTTCA TC-AACTGATTGCGCCC TTCA GGGCGCG-TCAGTAAGA TTTTCATTGAGTGTT Spea_0373 453050 - 452118 - | porphobilinogen deaminase TERM 468 454515 - 454527 + G 73 -7.7 -4.08767 | overlap 454499 CGGCTCAACTCGCTC TGGAG TCG CTCCA TTTTAGAGCCGTACC Spea_0374 453249 - 455672 + | adenylate cyclase TERM 469 455745 - 455715 - T 79 -9.1 -3.86015 | gap 1 GATGGTTTGCATAAA GCT-GAATGAGGAG TTAC CTCCCCATCCTAGC GGCAGCATAAGATTA Spea_0375 456087 - 455758 - | frataxin family protein Spea_0376 456462 - 456662 + | hypothetical protein Spea_0377 456668 - 457912 + | diaminopimelate decarboxylase TERM 470 457922 - 457959 + F 72 -3.3 -5.04385 | gap 1, opp_overlap 457923 457925 457929, overlap 457923 457926 CCGTAAACTAGAATA ATACTAAGCCGCGGACGC AAG GCGTGCGCGGCAGA-TAC TTTTTTAAGGATGTC TERM 471 457955 - 457925 - f 72 -8.3 -3.54602 | gap 2, opp_overlap 457923 457922 457926, overlap 457923 457929 TAAACTAGAATAATA CTAAGCCGCGGACGC AAG GCGTGCGCGGC--AG ATACTTTTTTAAGGA TERM 472 457926 - 457956 + F 80 -11 -3.38056 | opp_overlap 457925 457923 457929, overlap 457923 457922 AAACTAGAATAATAC TAAGCCGCGGACGC AAG GCGTGCGCGGCAGA TACTTTTTTAAGGAT TERM 473 457953 - 457929 - f 100 -17.1 -3.48696 | opp_overlap 457926 457923 457922, overlap 457925 457923 CTAGAATAATACTAA GCCGCGGACGC AAG GCGTGCGCGGC AGATACTTTTTTAAG TERM 474 458040 - 458050 + G 80 -5.4 -4.9725 | TCGTCGATGGGGTGA CACA GAA TGTG TTTTTCTCTCCCGAT Spea_0378 457970 - 458806 + | diaminopimelate epimerase Spea_0379 458803 - 459435 + | hypothetical protein Spea_0380 459448 - 460362 + | tyrosine recombinase XerC Spea_0381 460359 - 461075 + | HAD family hydrolase Spea_0382 461183 - 461647 + | Egg lysin (Sperm-lysin) TERM 475 461671 - 461654 - T 88 -11.3 -3.75105 | opp_overlap 461654 GCAATTTAGTAACAA GGCTCAC CTCG GTGAGCC TTTCTGTTCTAGCTG TERM 476 461654 - 461671 + T 93 -11.3 -4.28188 | opp_overlap 461654 GCAATTTAGTAACAA GGCTCAC CTCG GTGAGCC TTTCTGTTCTAGCTG Spea_0383 462428 - 461706 - | hypothetical protein Spea_0384 462769 - 463182 + | hypothetical protein TERM 477 463498 - 463510 + G 84 -7.7 -4.81249 | opp_overlap 463497 463489, overlap 463504 GTACAACTGCAACAC CCTTC ACT GAAGG TTTTTCAGTTTAGAC TERM 478 463561 - 463531 - g 80 -9.6 -3.88946 | CAGTTTAGACAACAA GCGCTCGATGGTGC GGC GCACACCCAAGCGC TAACTCCTGGTTATG TERM 479 463899 - 463881 - g 83 -10.2 -3.794 | GGCTAAGCGAGCAAA GGCTGGCG TGA CGCCAGAC GCCGAAGTTAAGCGC Spea_0385 463306 - 464730 + | outer membrane efflux protein Spea_0386 464727 - 465953 + | hypothetical protein Spea_0387 465965 - 469120 + | CzcA family heavy metal efflux protein TERM 480 469200 - 469173 - T 93 -12.8 -3.89055 | opp_overlap 469178, overlap 469178 ACATAGTTGGATAAA CAAAAGCCCTGC ATTT GCAGGGCTTTTT CTATTTTATAAAAGC TERM 481 469178 - 469195 + T 100 -12.7 -5.32599 | opp_overlap 469173 469178 GTTGGATAAACAAAA GCCCTGC ATTT GCAGGGC TTTTTCTATTTTATA TERM 482 469195 - 469178 - T 100 -12.7 -4.99043 | opp_overlap 469178, overlap 469173 GTTGGATAAACAAAA GCCCTGC ATTT GCAGGGC TTTTTCTATTTTATA Spea_0388 470804 - 469272 - | leucyl aminopeptidase TERM 483 471163 - 471128 - R 100 -20 -3.07466 | opp_overlap 471133, overlap 471133 AGGGTACATATAAAG CAAAACGGGCTTTCCA TTGC TGGAAAGCCCGTTTTA ATACAACACGTTAAG TERM 484 471133 - 471158 + r 100 -17.7 -4.25104 | opp_overlap 471128 471133 ACATATAAAGCAAAA CGGGCTTTCCA TTGC TGGAAAGCCCG TTTTAATACAACACG TERM 485 471158 - 471133 - R 100 -17.7 -4.66057 | opp_overlap 471133, overlap 471128 ACATATAAAGCAAAA CGGGCTTTCCA TTGC TGGAAAGCCCG TTTTAATACAACACG Spea_0389 471493 - 471188 - | Fis family transcriptional regulator Spea_0390 472479 - 471511 - | nifR3 family TIM-barrel protein TERM 486 472591 - 472633 + r 73 -8.3 -3.72141 | opp_overlap 472596, overlap 472593 472596 472601 TGACTTTTGCCTAGC GAGAAGTCAGTCGCGGCGC GGAAA GCGCCGCGGGTTACTGCTA TTTGCGTATACCTGT TERM 487 472593 - 472631 + r 80 -10.9 -3.4404 | opp_overlap 472596, overlap 472591 472596 472601 ACTTTTGCCTAGCGA GAAGTCAGTCGCGGCGC GGAAA GCGCCGCGGGTTACTGC TATTTGCGTATACCT TERM 488 472596 - 472628 + r 80 -11.2 -2.86838 | opp_overlap 472596, overlap 472593 472591 472601 TTTGCCTAGCGAGAA GTCAGTCGCGGCGC GGAAA GCGCCGCGGGTTAC TGCTATTTGCGTATA TERM 489 472628 - 472596 - R 72 -9 -3.35679 | opp_overlap 472596 472593 472591 472601 TTTGCCTAGCGAGAA GTCAGTCGCGGCGC GGAAA GCGCCGCGGGTTAC TGCTATTTGCGTATA TERM 490 472601 - 472623 + r 93 -14.1 -2.5789 | opp_overlap 472596, overlap 472596 472593 472591 CTAGCGAGAAGTCAG TCGCGGCGC GGAAA GCGCCGCGG GTTACTGCTATTTGC Spea_0391 473512 - 472631 - | ribosomal protein L11 methyltransferase TERM 491 472843 - 472858 + g 70 -9 -3.36273 | opp_overlap 472839 472837 CGACTAGAATATCTG CCAGCA GATC TGCTGG TTGATCTTCAGGAAG TERM 492 474254 - 474266 + G 75 -2.6 -5.14163 | overlap 474245 TTGGCAGTTGGTCAC CGGC TTCGT GCTG TTTTTCTTAGTGCCT Spea_0392 473880 - 474584 + | fumarate reductase cytochrome b-556 subunit TERM 493 474791 - 474815 + G 88 -14.3 -3.07431 | AGTGGTTGGTTGGAT CTGAGCCAGAG TAT CTCTGGCGCAG TATTGGCAATATTTT Spea_0393 474746 - 475420 + | fumarate reductase respiratory complex transmembrane subunit TERM 494 476723 - 476756 + G 71 -3.9 -4.82901 | overlap 476725 TCGCTGAGACAGTAG TTGGCGGTATGATTA TCGG TAAGTATGTCGCCGA TTTTTGTGAACAAAA Spea_0394 475477 - 477477 + | fumarate reductase flavoprotein subunit Spea_0395 477474 - 478217 + | fumarate reductase iron-sulfur subunit TERM 495 478253 - 478269 + F 100 -9.4 -5.28176 | opp_overlap 478251 478253 GTGACGATTTAAAGA GCCTGC ATTGC GCAGGC TTTTTTGTGGGTGAC TERM 496 478269 - 478253 - f 77 -10.1 -3.42395 | opp_overlap 478253, overlap 478251 GTGACGATTTAAAGA GCCTGCA TTG CGCAGGC TTTTTTGTGGGTGAC Spea_0396 478350 - 479264 + | LysR family transcriptional regulator TERM 497 479308 - 479279 - T 91 -13.1 -3.04022 | opp_overlap 479287, overlap 479287 ATCAAATAGCAGACA CAAAAAAACCGCA CGAG TGCGGTTTTTTTA TCAATGACGCCTAAG TERM 498 479287 - 479300 + T 100 -8.1 -5.64274 | opp_overlap 479287 479279 GCAGACACAAAAAAA CCGCA CGAG TGCGG TTTTTTTATCAATGA TERM 499 479300 - 479287 - T 100 -8.1 -5.76633 | opp_overlap 479287, overlap 479279 GCAGACACAAAAAAA CCGCA CGAG TGCGG TTTTTTTATCAATGA Spea_0397 480589 - 479324 - | transcription termination factor Rho Spea_0398 481153 - 480827 - | thioredoxin Spea_0399 481557 - 482867 + | ATP-dependent RNA helicase RhlB TERM 500 483138 - 483114 - g 72 -9.3 -3.61715 | opp_overlap 483106 483118 TATTTCTGCTAATAA TGTAGCTGTGA TTG CCACGGCTACA TTGAGAAATATTTCT TERM 501 483748 - 483730 - g 75 -3 -5.19879 | opp_overlap 483735, overlap 483732 CTTGAAATAGAAAAA CTTCACCT TTC AGGTGGCG CATTACGTGAAGGGG Spea_0400 482881 - 483792 + | Ppx/GppA phosphatase TERM 502 484683 - 484638 - g 76 -9.1 -3.70007 | opp_overlap 484666 ATGAGTCAAAAGGAA TTGTGAGAGAAACGACAACTG GTGC CAATGGTAGCTTCTCTCTCAA AGGGCTACCAATTGG Spea_0401 484439 - 487420 + | TonB-dependent receptor TERM 503 487435 - 487475 + F 72 -10 -2.51872 | gap 1, opp_overlap 487448 487449, overlap 487449 ATTTATAAGTTAGTC GCAAATACAAAAAGGCCGC AAAT GCGGCTTTTTT-TATTTTC ATGTCTTGTCCTGAA TERM 504 487463 - 487448 - f 87 -6 -5.19879 | opp_overlap 487435 487449, overlap 487449 TCGCAAATACAAAAA GGCCGC AAAT GCGGCT TTTTTTATTTTCATG TERM 505 487449 - 487462 + F 100 -9.5 -6.11229 | opp_overlap 487448 487449, overlap 487435 CGCAAATACAAAAAG GCCGC AAAT GCGGC TTTTTTTATTTTCAT TERM 506 487462 - 487449 - f 79 -9.5 -3.70843 | opp_overlap 487449 487435, overlap 487448 CGCAAATACAAAAAG GCCGC AAAT GCGGC TTTTTTTATTTTCAT TERM 507 487483 - 487511 + F 86 -9.8 -3.97947 | gap 1, opp_overlap 487492 TTATTTTCATGTCTT GTCCTGAAATGTG TTTA CACATTT-AGGAC TTTATAATGACTACA Spea_0402 487518 - 487916 + | transposase TERM 508 488256 - 488269 + G 72 -6.7 -4.28111 | opp_overlap 488255 AGTTAGTGCCAACAG CACCT GAAG AGGTG TTTGTTAGTGATATA TERM 509 488643 - 488654 + G 72 -3 -4.9792 | AGTTAAAGCAACTCG TTGA GGAG TCAA TTTTTATATACAATG TERM 510 488749 - 488726 - g 100 -13.2 -5.27923 | opp_overlap 488728 CAAGTGCATAAAAAA GACCAGCAGC AGAA GCTACTGGTC TAGTAAAAACCGTCA Spea_0403 488000 - 488752 + | integrase catalytic region TERM 511 488896 - 488906 + F 70 -3.2 -4.90266 | TTTAGACACCTTTTA TGCG TAT TGCA TTTTTAGTTAATAAA TERM 512 490006 - 490028 + G 76 -4.1 -4.93296 | opp_overlap 490006 GATATGGGACCAAAT GGTGGTTGG GCATA TCAAGCACC TTTTTCTAATACTGA TERM 513 491602 - 491621 + G 71 -10.8 -2.65766 | CGTAACTGGGCGGGT TCATCAGG AACA CCTGATGA TCGTGTAAGCTTTAG Spea_0404 489235 - 491925 + | TonB-dependent receptor TERM 514 491958 - 491984 + T 100 -12.4 -4.96848 | opp_overlap 491963, overlap 491963 TTAGTTGACCTACGA AAAAAGGCACTC AAT GAGTGCCTTTTC TTTTTATATGACAGC TERM 515 491979 - 491963 - T 100 -12.3 -5.1675 | opp_overlap 491958 491963 TGACCTACGAAAAAA GGCACTC AAT GAGTGCC TTTTCTTTTTATATG TERM 516 491963 - 491979 + T 100 -12.3 -5.38839 | opp_overlap 491963, overlap 491958 TGACCTACGAAAAAA GGCACTC AAT GAGTGCC TTTTCTTTTTATATG Spea_0405 492536 - 492003 - | hypothetical protein TERM 517 496091 - 496079 - R 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 518 496889 - 496873 - R 86 -9.4 -4.08546 | overlap 496886 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 519 497395 - 497384 - R 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 520 498760 - 498794 + r 95 -15.2 -2.80589 | opp_overlap 498768, overlap 498768 CAGGCGCTAAATTAA GTAGAGAAGCCACCTT GTT AAGGTGGCTTTTTTGC GTTTGGAGCTTTTTA TERM 521 498786 - 498768 - R 95 -13.2 -3.63078 | opp_overlap 498760 498768 AAATTAAGTAGAGAA GCCACCTT GTT AAGGTGGC TTTTTTGCGTTTGGA TERM 522 498768 - 498786 + r 100 -13.2 -5.22039 | opp_overlap 498768, overlap 498760 AAATTAAGTAGAGAA GCCACCTT GTT AAGGTGGC TTTTTTGCGTTTGGA TERM 523 498886 - 498869 - R 72 -9.9 -3.07816 | GGCTCATCCACTTAA GTAGGCA TAAA TGCCTAC TCCCGACGTCATCCC TERM 524 499050 - 499071 + r 100 -15.9 -5.56112 | opp_overlap 499050 AAGAGAAGCGATAAA GCCCGTTGC TAAC GCAACGGGC TTTTTTCGTTTTTGT TERM 525 499071 - 499050 - R 100 -15.9 -4.0174 | opp_overlap 499050 AAGAGAAGCGATAAA GCCCGTTGC TAAC GCAACGGGC TTTTTTCGTTTTTGT Spea_0406 500534 - 499518 - | transposase IS116/IS110/IS902 family protein TERM 526 500436 - 500420 - G 75 -2.9 -5.1356 | TTTGAGCAAGAAAAA GCACTAA CTC TTTGCGC TTAATTATCTTCTTT TERM 527 500930 - 500913 - R 95 -11.3 -4.85129 | opp_overlap 500899 ACTATAGAGCAAAAA GAGCCAC TTTT GTGGCTC ATAGATGTTTGTAGG Spea_0407 501343 - 500954 - | mutator MutT protein Spea_0408 501579 - 501340 - | hypothetical protein Spea_0409 502373 - 501639 - | hypothetical protein Spea_0410 502987 - 502382 - | dephospho-CoA kinase Spea_0411 503918 - 503007 - | prepilin peptidase TERM 528 503601 - 503619 + g 70 -8.8 -3.36803 | opp_overlap 503601, overlap 503618 GCCTCTTAGCATCAA CCAGCCAA GCA TTGGCAGG TTATGAATAGCCTTG TERM 529 503852 - 503835 - G 74 -5.5 -4.60487 | CACCACGTTTAAAAA GCTACCG ATAA CAGCAGC AAACACAAAGCTTAA TERM 530 503893 - 503879 - G 71 -3.5 -4.87786 | TTAACGCGATAAAAA GCCAA GGATT CTGGC TAAAAACAGAAATTA TERM 531 503990 - 503965 - R 75 -9.9 -3.31501 | gap 1, overlap 503955 503966 ATTAACCGCCTACAA CTTTACCCATCT GGA AGATGGGT-AAG TACATGGCGACAATT TERM 532 503990 - 503966 - R 72 -10.1 -2.58579 | overlap 503965 503955 TTAACCGCCTACAAC TTTACCCATCT GGA AGATGGGTAAG TACATGGCGACAATT Spea_0412 505219 - 503951 - | type II secretion system protein TERM 533 504685 - 504697 + g 72 -2.7 -5.04597 | TCTTAATTTTCGACT TTAGA GCT TCTGA TTTTTCTCTATAGGT TERM 534 505139 - 505166 + g 82 -5.6 -5.17786 | TCGATTGGTGCCTTT CCACTCGAAGGT GAGG ACTTTTGATTGG TTTTTCGTTTTCTTG Spea_0413 506972 - 505266 - | type IV-A pilus assembly ATPase PilB TERM 535 506878 - 506851 - G 78 -12 -2.96695 | opp_overlap 506851, overlap 506848 506858 TCCTTTACTAAAGTA GCCACAAGCCCC TGAC GGAGCTTGCGAC TTTTAGACACGGCTT Spea_0414 507453 - 507007 - | methylation site containing protein TERM 536 507249 - 507272 + g 70 -2.4 -5.00616 | overlap 507251 TTTCATCACAACCGA TACCAGTTTG AATA CAAGTTGGGA TTTTTTGGGCGAAGG TERM 537 507993 - 508015 + r 85 -4.2 -5.55664 | opp_overlap 507993 CTGTGCTGTAAATAT TGACACTT ATTGTTG AGGTGTCA TTTTTTTGGTGGTGA TERM 538 508101 - 508081 - R 100 -11.9 -5.86061 | opp_overlap 508081 TGTCAGCAAAAAAAA GGCTAAGCA TTT CGCTTAGCC TTTCTTGTTTTAGCC TERM 539 508081 - 508101 + r 95 -11.2 -4.67697 | opp_overlap 508081 TGTCAGCAAAAAAAA GGCTAAGC ATTTC GCTTAGCC TTTCTTGTTTTAGCC Spea_0415 509095 - 508211 - | nicotinate-nucleotide pyrophosphorylase Spea_0416 509338 - 509880 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 540 510386 - 510397 + G 72 -5.8 -4.37544 | ATTATCGCTATTACG GTGC GATT GCAC TTTATCTTATTATCC TERM 541 510515 - 510540 + G 78 -6.3 -4.62054 | gap 1 ATAACCTACTATTCG TACTTGA-TTGG ATC CCAAGTCGAGTA TTTTCATTTGGTTAC Spea_0417 509947 - 510795 + | regulatory protein AmpE TERM 542 510872 - 510906 + F 100 -12.2 -4.82863 | opp_overlap 510872 TGATTAGACCAAAAA CCGTACGGAACATTCA CAA TGAATGCATCGTACGG TTTCTTTTATCATTA TERM 543 510906 - 510872 - f 100 -12.2 -4.82667 | opp_overlap 510872 TGATTAGACCAAAAA CCGTACGGAACATTCA CAA TGAATGCATCGTACGG TTTCTTTTATCATTA Spea_0418 511158 - 511910 + | transcriptional regulator PdhR Spea_0419 512019 - 514679 + | pyruvate dehydrogenase subunit E1 Spea_0420 514693 - 516555 + | dihydrolipoamide acetyltransferase TERM 544 516585 - 516561 - f 100 -17.3 -4.55697 | opp_overlap 516561, overlap 516578 AGTGCTATAAACAAA TAGGCTGCTTG ATT CAAGCAGCCTA TTTTCTAGGTCGCTT TERM 545 516561 - 516585 + F 100 -17.3 -4.43501 | opp_overlap 516561 516578 AGTGCTATAAACAAA TAGGCTGCTTG ATT CAAGCAGCCTA TTTTCTAGGTCGCTT Spea_0421 516799 - 518226 + | dihydrolipoamide dehydrogenase TERM 546 518234 - 518223 - f 78 -3 -5.38549 | opp_overlap 518223 518228, overlap 518228 GGCAAAGAAGAAAAA GTAA GCAT TTAC TAATGTTTTAAAAGA TERM 547 518242 - 518273 + F 78 -11 -2.95298 | opp_overlap 518248 518250, overlap 518250 GCATTTACTAATGTT TTAAAAGAGCGCTC ATTT GAGCGCTTTTTTTA TATCTAATAACTCAG TERM 548 518267 - 518248 - f 75 -7.8 -4.11751 | opp_overlap 518242 518250, overlap 518250 ACTAATGTTTTAAAA GAGCGCTC ATTT GAGCGCTT TTTTTATATCTAATA TERM 549 518265 - 518250 - f 80 -10.4 -3.6543 | opp_overlap 518242 518250, overlap 518248 TAATGTTTTAAAAGA GCGCTC ATTT GAGCGC TTTTTTTATATCTAA TERM 550 518250 - 518265 + F 100 -10.4 -5.76633 | opp_overlap 518250 518248, overlap 518242 TAATGTTTTAAAAGA GCGCTC ATTT GAGCGC TTTTTTTATATCTAA TERM 551 519274 - 519262 - g 79 -4.1 -5.18643 | CGAATTAAAACAAAA GTCCA ACA TAGAC TACACCTATGACATT TERM 552 520619 - 520644 + G 80 -6.9 -4.65895 | overlap 520620 520640 ATGAACAATGAAGTT TGGTCTGAGAA GCCA TTCTCATACCG TTTTTACGTCGAGAA TERM 553 520640 - 520694 + G 78 -6.7 -4.66057 | gap 1, overlap 520620 520619 GAGAAGCCATTCTCA TACCGTTTTTACGTCGAGAAGTATTG GTGG CAG-ACTTCTTGGTTTAAAGGCGGTA TTTTGCTTTGTCTAT Spea_0422 518372 - 522850 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 554 525026 - 525016 - g 78 -5.4 -4.8622 | opp_overlap 525024 GTGTGGAATCAAAAA GACA ATG TGTC ACTCGATGACTTAAT Spea_0423 522943 - 525159 + | patatin TERM 555 525243 - 525216 - T 80 -11.4 -2.81187 | opp_overlap 525221, overlap 525221 AAAGAGCCGATTAGA CAAAAGCCCATC GATT GATGGGCTTTTT GCTTTTATGGTCGTA TERM 556 525221 - 525238 + T 95 -11.3 -5.1417 | opp_overlap 525216 525221 GCCGATTAGACAAAA GCCCATC GATT GATGGGC TTTTTGCTTTTATGG TERM 557 525238 - 525221 - T 93 -11.3 -4.57353 | opp_overlap 525221, overlap 525216 GCCGATTAGACAAAA GCCCATC GATT GATGGGC TTTTTGCTTTTATGG Spea_0424 525916 - 525248 - | 2-deoxyglucose-6-phosphatase Spea_0425 526341 - 528938 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 558 528988 - 529008 + T 100 -15.5 -5.20534 | opp_overlap 528988 TTGGAGCATTAAAAA GGCCAGCTA AAT TAGCTGGCC TTTTTGTTAATTCAT TERM 559 529008 - 528988 - T 100 -15.5 -4.77036 | opp_overlap 528988 TTGGAGCATTAAAAA GGCCAGCTA AAT TAGCTGGCC TTTTTGTTAATTCAT TERM 560 529086 - 529101 + T 71 -7.6 -3.91541 | opp_overlap 529082 529086 CTAGAACCTAAGCTA GAAGCA TGCT TGCTTC TTGTTACTTTCCTCG Spea_0426 529602 - 529135 - | anti-RNA polymerase sigma 70 factor TERM 561 529777 - 529748 - H 100 -16.5 -5.18371 | opp_overlap 529742 529741, overlap 529749 TGCTATAAAATAAAA TGCCCAGCGATAG AAAG CTATCGCTGGGCG AGTAAAGTTTGTAGC TERM 562 529776 - 529749 - H 100 -20 -3.69938 | opp_overlap 529742 529741, overlap 529748 GCTATAAAATAAAAT GCCCAGCGATAG AAAG CTATCGCTGGGC GAGTAAAGTTTGTAG Spea_0427 530134 - 531198 + | uroporphyrinogen decarboxylase TERM 563 531245 - 531270 + F 84 -10.5 -3.95071 | opp_overlap 531245 531248 531249, overlap 531249 ATCGATTGGTATAAA TAAGGGCTCAG TTTA CTGGGCCTTTA TTGTTTCCGCCTTTA TERM 564 531249 - 531266 + F 88 -9.1 -4.56978 | opp_overlap 531249 531248 531245, overlap 531245 ATTGGTATAAATAAG GGCTCAG TTTA CTGGGCC TTTATTGTTTCCGCC TERM 565 532347 - 532329 - g 74 -3.8 -4.99035 | CCACTCAGATAAAAA TTGAAGCT GGA AGCGCCAA GCCTGGATTAGTTTT Spea_0428 531806 - 534379 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 566 535019 - 535033 + G 71 -7.8 -3.88583 | opp_overlap 535018 535012 TGAGTAATGACAATG TCGCGG TAA CCGTGA TTTGTCCCGACTTTG Spea_0429 534487 - 535290 + | short chain dehydrogenase Spea_0430 535541 - 535323 - | hypothetical protein TERM 567 535778 - 535795 + r 70 -8.4 -3.37881 | opp_overlap 535778 GGTGAATACAAAAAA GCCCTG AGTTAA CAGGGC TTAAATTTGTATTGG TERM 568 535795 - 535778 - R 95 -8.4 -5.47159 | opp_overlap 535778 GGTGAATACAAAAAA GCCCTG AGTTAA CAGGGC TTAAATTTGTATTGG TERM 569 536049 - 536032 - R 95 -8.4 -5.36441 | opp_overlap 536032 CGCTGACATAAAAAA GCCCTG AATTAA CAGGGC TTTTAAGCTAGAACT TERM 570 536032 - 536049 + r 82 -8.4 -4.13945 | opp_overlap 536032 CGCTGACATAAAAAA GCCCTG AATTAA CAGGGC TTTTAAGCTAGAACT Spea_0431 537473 - 536172 - | phosphoribosylamine--glycine ligase TERM 571 536754 - 536784 + g 79 -10.5 -3.56092 | gap 1, opp_overlap 536747 536752 536753 536750 TTGAGTAACAACAGG CGCTGGCGAGTATG CGCC CATGC-CGCCAGTG TTTGGACCATGATCG TERM 572 537520 - 537552 + r 80 -7.8 -4.44046 | gap 1, opp_overlap 537520 CTATCTCTGCATCAA GCATGCTC-ACGTAT TGGC ATACGTTGCGCGTGC TTTCTTTGACCTAGA Spea_0432 539240 - 537651 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 573 539473 - 539492 + H 75 -7.9 -4.04149 | CAGAATAACTCTTGA CCTTGGA TACAAC TCCAAGG TTTATACTCTCGTTA Spea_0433 539597 - 540118 + | zinc-responsive transcriptional regulator TERM 574 540890 - 540880 - g 85 -6.8 -5.02074 | CGAGTCTTCAAAAAA CAGC CAT GCTG ATGCTGAAGCTGAAA Spea_0434 540140 - 541525 + | permease TERM 575 541577 - 541560 - f 88 -11.3 -3.75153 | opp_overlap 541560 GTTTGGTAAGGTAAA GGCACTC ATTG GAGTGCC TTTTTGTTTTTAGGG TERM 576 541560 - 541577 + F 100 -11.3 -5.61881 | opp_overlap 541560 GTTTGGTAAGGTAAA GGCACTC ATTG GAGTGCC TTTTTGTTTTTAGGG TERM 577 541833 - 541845 + G 74 -3.3 -4.95155 | TAGTGGTGATGATAT CTCGG TGA CAGAG TTTTTCTGGTATGGC Spea_0435 541687 - 542343 + | DSBA oxidoreductase Spea_0436 542356 - 542751 + | putative thiol-disulphide oxidoreductase DCC TERM 578 542788 - 542776 - f 70 -3.4 -4.85599 | GCTATCTCATAAAAA GCTT TGCTT AAGC CTCTCCTCTTAATCG TERM 579 542952 - 542983 + F 71 -5.2 -4.59773 | gap 1, opp_overlap 542952 542954 542960 TTTATCGATAAATCA GAGCTAAAT-TGCAG TAA CGGCAAATTCAGCTC TTTTTAGGCGTAAAA TERM 580 543209 - 543219 + F 89 -5.4 -5.49569 | overlap 543203 ACTTGTTGCTTGTGA GACA TAA TGTC TTTTTTGTGTTGGTC TERM 581 543800 - 543788 - g 72 -4.8 -4.67904 | opp_overlap 543788 CAGCAACGGTAAAAA CGCT GAAAA AGCG ATTTTCCACATTGAA TERM 582 544038 - 544025 - g 82 -3.1 -5.47218 | overlap 544027 CTTCATTGAAAAAAA TAGTG ATGG CACCA CAGTAAACCGTTGGT Spea_0437 543585 - 544166 + | molybdopterin oxidoreductase Fe4S4 region Spea_0438 544215 - 546605 + | formate dehydrogenase, alpha subunit TERM 583 547396 - 547414 + G 82 -13.2 -2.87344 | overlap 547397 TGCTGCAGGTATCAT CGCAACAG TTG CTGTTGCG TGTCTACACCGCATC Spea_0439 546608 - 547510 + | formate dehydrogenase, beta subunit Spea_0440 547516 - 548160 + | formate dehydrogenase, gamma subunit Spea_0441 548163 - 549134 + | formate dehydrogenase accessory protein FdhE TERM 584 549207 - 549186 - f 85 -11.6 -3.43151 | opp_overlap 549186 CTAATTAGTAAGCAA GAGCCGCA TCTCGG TGCGGCTC TTTTATTAACCCAAA TERM 585 549186 - 549207 + F 100 -12.3 -4.63218 | opp_overlap 549186 CTAATTAGTAAGCAA GAGCCGCAT CTCG GTGCGGCTC TTTTATTAACCCAAA TERM 586 549666 - 549654 - g 83 -10.5 -3.75332 | ATGGGCCAAGGTAAA CGCGG TCA CCGCG ATAGCGCAATCTCTG Spea_0442 549258 - 550748 + | selenocysteine synthase Spea_0443 550745 - 552652 + | selenocysteine-specific translation elongation factor TERM 587 553681 - 553707 + G 76 -8.2 -4.15788 | TACAAAAAGCGGCCA TTGCAAATATTA GTA TTATATTTGCAA TTTCTTCAGCAACTT Spea_0444 553011 - 553874 + | formate dehydrogenase family accessory protein FdhD TERM 588 553969 - 553992 + G 70 -5.2 -4.39828 | AATTCTGGTCGCCTT TTGCTGCCGT GATA GCGGCGGGAA TTTTGTCGACCTATT TERM 589 555065 - 555077 + G 78 -4.8 -5.00616 | TGTGCTGATCTTAAT GTGG GAGCA CCAC TTTTTTAAAAAGCAG Spea_0445 553920 - 555191 + | putative inner membrane protein TERM 590 555236 - 555258 + F 82 -8.4 -4.25104 | overlap 555238 TCATTTGTTTTATAT TTGGCTCAAG CCA CTTGAGCCTG TTTTGCTGAGGAGCA TERM 591 555238 - 555256 + F 95 -13.2 -3.73042 | overlap 555236 ATTTGTTTTATATTT GGCTCAAG CCA CTTGAGCC TGTTTTGCTGAGGAG Spea_0446 555278 - 555514 + | hypothetical protein TERM 592 555851 - 555835 - T 100 -12.3 -5.49234 | opp_overlap 555835 ACAGGTAATAAAAAA GGCACTC GAT GAGTGCC TTTCTTTTATGCTTT TERM 593 555835 - 555851 + T 100 -12.3 -4.84219 | opp_overlap 555835 ACAGGTAATAAAAAA GGCACTC GAT GAGTGCC TTTCTTTTATGCTTT Spea_0447 556635 - 555907 - | hypothetical protein TERM 594 556721 - 556737 + r 71 -3.7 -5.0065 | opp_overlap 556720 556721, overlap 556722 AGGCCTTTAAAAATG CTAATCG CAG CGATTAA TTTTGTTTATAGCTG Spea_0448 557707 - 556787 - | LysR family transcriptional regulator Spea_0449 557869 - 558234 + | hypothetical protein TERM 595 558720 - 558701 - g 71 -7.8 -3.93262 | opp_overlap 558713 TTTAATAAATGCAAA GCGGCG CTTATTGT CGCCGC GGCTTTCGGTCTAGC TERM 596 558855 - 558865 + G 74 -8.2 -3.85165 | ATACTCTTGAAGAGG GCGC AGT GCGC TTTGAGTTTGAAGTG Spea_0450 558677 - 560740 + | hypothetical protein TERM 597 560791 - 560809 + F 100 -10.3 -5.5943 | CCCACTACTTTTTTG GGGCTCT TTTAT AGAGCCC TTTTTTTAATGGTTT Spea_0451 561005 - 561463 + | GCN5-related N-acetyltransferase TERM 598 561509 - 561494 - T 90 -10.4 -4.45168 | opp_overlap 561494 GGTTGAAAATATAAA GCGCAC CTAA GTGCGC TTTTTTAATGTGTTT TERM 599 561494 - 561509 + T 100 -10.4 -5.28755 | opp_overlap 561494 GGTTGAAAATATAAA GCGCAC CTAA GTGCGC TTTTTTAATGTGTTT Spea_0452 561794 - 561549 - | hypothetical protein TERM 600 561603 - 561613 + g 78 -5.4 -4.79352 | ACCGTTTCTACTGAT CACT GCA AGTG TTTTATTCTGCATAA Spea_0453 561972 - 562856 + | radical SAM domain-containing protein Spea_0454 563810 - 562872 - | LysR family transcriptional regulator Spea_0455 564739 - 563807 - | LysR family transcriptional regulator Spea_0456 566078 - 565038 - | OmpA domain-containing protein TERM 601 565196 - 565208 + g 72 -4.8 -4.63184 | CTAAGTAGGCTTCTA CGTG CTGTA CACG TTTTTCAGATAGCTT TERM 602 566312 - 566275 - R 74 -5 -4.73613 | overlap 566279 GGATGATGAATAAAA TGAATACTTAGCGG ATATAGGGCA CCGCTAAGTATCGA TCAGGTTAGTGCTCT TERM 603 566308 - 566279 - R 73 -8 -3.83868 | overlap 566275 GATGAATAAAATGAA TACTTAGCGG ATATAGGGCA CCGCTAAGTA TCGATCAGGTTAGTG Spea_0457 567154 - 566318 - | MscS mechanosensitive ion channel Spea_0458 567367 - 567825 + | hypothetical protein TERM 604 567844 - 567870 + T 100 -16 -2.85407 | opp_overlap 567844 567850, overlap 567850 AGATTTAATAAAACT TAAAAAGGGCGC TTA GCGCCCTTTTTG CTTCTTGATGCTATG TERM 605 567870 - 567844 - T 91 -13.8 -2.64104 | opp_overlap 567844 567850, overlap 567850 AGATTTAATAAAACT TAAAAAGGGCGC TTA GCGCCCTTTTTG CTTCTTGATGCTATG TERM 606 567864 - 567850 - T 100 -12.8 -4.91084 | opp_overlap 567844 567850, overlap 567844 AATAAAACTTAAAAA GGGCGC TTA GCGCCC TTTTTGCTTCTTGAT TERM 607 567850 - 567864 + T 100 -12.8 -5.00339 | opp_overlap 567850 567844, overlap 567844 AATAAAACTTAAAAA GGGCGC TTA GCGCCC TTTTTGCTTCTTGAT Spea_0459 568111 - 567896 - | hypothetical protein Spea_0460 568608 - 569366 + | uridine phosphorylase TERM 608 569414 - 569400 - T 100 -11.4 -5.7946 | opp_overlap 569400 TGTTCAATAAAAAAA GGCGCT ATA AGCGCC TTTTTCATTGGAATC TERM 609 569400 - 569414 + T 95 -11.4 -4.87291 | opp_overlap 569400 TGTTCAATAAAAAAA GGCGCT ATA AGCGCC TTTTTCATTGGAATC Spea_0461 570192 - 569440 - | hypothetical protein TERM 610 570033 - 570056 + g 82 -7.4 -4.62441 | CATATTTCCAATCAC CAGCGGTTTC AAAG GTAACTGCTG TTTGTTTATCTGAAG Spea_0462 570582 - 571061 + | hypothetical protein Spea_0463 571090 - 572019 + | band 7 protein Spea_0464 572019 - 572957 + | band 7 protein TERM 611 572987 - 573013 + F 100 -12.4 -5.28942 | opp_overlap 572983 572974 AACCTAAAATATCTA TGCTAGATCCTA TAC TGGGGTCTAGCA TTTTTATTTCAGGTA Spea_0465 573068 - 573481 + | NUDIX hydrolase Spea_0466 575906 - 573816 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Spea_0467 576330 - 576683 + | endoribonuclease L-PSP TERM 612 576747 - 576710 - f 70 -9.9 -2.52519 | opp_overlap 576710 576715, overlap 576703 576709 576707 TCAGTATATGAAGAG TTCAATCGCCGAAGTGA CTCC TCGCTTCGGCGATTCCA TTTCTTAACGATTTC TERM 613 576710 - 576747 + F 95 -12.1 -4.19371 | opp_overlap 576703 576710 576709 576707, overlap 576715 TCAGTATATGAAGAG TTCAATCGCCGAAGTGA CTCC TCGCTTCGGCGATTCCA TTTCTTAACGATTTC TERM 614 576715 - 576742 + F 100 -16.4 -3.37761 | opp_overlap 576710 576709 576707, overlap 576710 ATATGAAGAGTTCAA TCGCCGAAGTGA CTCC TCGCTTCGGCGA TTCCATTTCTTAACG Spea_0468 576841 - 579006 + | DNA-dependent helicase II TERM 615 579021 - 579046 + F 95 -12 -4.56597 | opp_overlap 579024 ATCGTGATGGTTGAA TAAGGCTGAG CTTAGA CTCAGCCTTA TTTTTAGCCGAAAAA TERM 616 579043 - 579024 - f 80 -10 -3.62597 | opp_overlap 579021 GTGATGGTTGAATAA GGCTGAGC TTAG ACTCAGCC TTATTTTTAGCCGAA TERM 617 579819 - 579833 + G 70 -4.9 -4.48713 | GGTCTATTCCAGCTT GCGGC ACTGA GCTGC TTTATTATTGCTGGC Spea_0469 579168 - 580034 + | 4-hydroxybenzoate octaprenyltransferase TERM 618 580080 - 580061 - f 91 -10.7 -4.58395 | opp_overlap 580061 CTTAGCCCTTAAAAA GCGCCTC TAGCAT GAGGCGC TTTTTTTATGCTTAA TERM 619 580061 - 580080 + F 100 -10.7 -5.71983 | opp_overlap 580061 CTTAGCCCTTAAAAA GCGCCTC TAGCAT GAGGCGC TTTTTTTATGCTTAA Spea_0470 580298 - 580828 + | hypothetical protein Spea_0471 581914 - 580895 - | putative esterase TERM 620 581309 - 581295 - G 73 -4.2 -4.7373 | TCATGCCACCAAAAA GATGGG CTG CCTATC AGGTAATTAGTAAAC Spea_0472 582132 - 583238 + | hypothetical protein TERM 621 583279 - 583241 - T 100 -14.6 -3.38564 | opp_overlap 583247, overlap 583251 TAAAGCCAGTTAGAA GGTGTAGTAAGCAGAGCC CTT GGCTCTGCTTACTTCTTC TTAAAAGCGGACGCT TERM 622 583247 - 583273 + T 100 -19.6 -3.9461 | opp_overlap 583241 583251 CAGTTAGAAGGTGTA GTAAGCAGAGCC CTT GGCTCTGCTTAC TTCTTCTTAAAAGCG TERM 623 583269 - 583251 - T 100 -14.6 -3.17219 | opp_overlap 583247, overlap 583241 TAGAAGGTGTAGTAA GCAGAGCC CTT GGCTCTGC TTACTTCTTCTTAAA Spea_0473 583892 - 583314 - | hypothetical protein Spea_0474 584259 - 584044 - | hypothetical protein Spea_0475 584666 - 586195 + | Na+/H+ antiporter NhaC TERM 624 586261 - 586235 - T 100 -11.6 -5.86332 | overlap 586252 586256 GTAAGGCAAAAAAAA GCCTTGTCGGCT AGG AATCGACAAGGC ACTTGGCGTAGCTAT TERM 625 586436 - 586382 - T 70 -8.6 -3.36131 | overlap 586389 586396 AAAATCATTTCAGAA CCTAGAACCTAGAACCTAGAACCTAG AAC CTAGAACCTAGAACCTAGAACCTAGG CTTAACGCTTCGCGA TERM 626 586436 - 586396 - T 72 -8.3 -3.45321 | overlap 586389 586382 ACCTAGAACCTAGAA CCTAGAACCTAGAACCTAG AAC CTAGAACCTAGAACCTAGG CTTAACGCTTCGCGA Spea_0476 587025 - 586492 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 627 586749 - 586759 + g 71 -6.8 -4.10566 | TAGAGATAGGCACTA CGAC CAA GTCG TTATTCTTGTTAACT Spea_0477 587515 - 587069 - | cytochrome C biogenesis protein Spea_0478 589494 - 587512 - | cytochrome c-type biogenesis protein CcmF TERM 628 588443 - 588423 - G 74 -10.5 -3.17051 | overlap 588421 588424 588441 CGGCCACGATTAAGA CGATGTTGC CGA GCAACATCA CGCTATCTCGTGAGA TERM 629 588442 - 588424 - G 76 -11.8 -2.50016 | overlap 588423 588421 588441 GGCCACGATTAAGAC GATGTTGC CGA GCAACATC ACGCTATCTCGTGAG TERM 630 588722 - 588708 - G 72 -8.6 -3.8211 | GCTGACTCAGAACAA CGCTAT GTA ATAGCG CGGTTGCCACAAGCC TERM 631 589117 - 589105 - G 79 -9.1 -4.05446 | GCCTGCAATCACAAA CGCCA GTA TGGCG ATCATGCGGCCGATA Spea_0479 590051 - 592087 + | cytochrome c, putative Spea_0480 592148 - 592576 + | rhodanese domain-containing protein TERM 632 592572 - 592585 + F 71 -3.9 -4.94811 | opp_overlap 592572 GAGTAACAGAAAAGC CATAA CGGA TTATG TTTATTTATTTTTAG Spea_0481 592614 - 593417 + | peptidylprolyl isomerase FKBP-type Spea_0482 593449 - 594186 + | hypothetical protein TERM 633 594251 - 594231 - f 75 -2.5 -5.25976 | overlap 594232 594245 AATTAAAAAAATAAA GTGTCGGTT TTA AACCGATAA TCGGAGGATGCTGTG Spea_0483 594264 - 594971 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 634 595155 - 595112 - g 85 -6.2 -5.24129 | gap 1, opp_overlap 595116 595134, overlap 595116 CGTTTCTACAAAAAA CAAACTGAAAACACC-CCTTT CTT AAAGGCGGCGTCTTTAGTTTC TTTAGTGACGATTGC TERM 635 595151 - 595116 - g 87 -7 -5.13354 | gap 1, opp_overlap 595116 595134, overlap 595112 TCTACAAAAAACAAA CTGAAAACACC-CCTTT CTT AAAGGCGGCGTCTTTAG TTTCTTTAGTGACGA TERM 636 595116 - 595151 + G 70 -4.8 -4.49556 | gap 1, opp_overlap 595116 595112, overlap 595134 TCTACAAAAAACAAA CTGAAAACACC-CCTTT CTT AAAGGCGGCGTCTTTAG TTTCTTTAGTGACGA Spea_0484 594974 - 595921 + | polysulphide reductase NrfD TERM 637 595931 - 595971 + F 75 -9.9 -3.27994 | gap 1, overlap 595934 ATCTAGTGAGGTTTT TTG-CAGTAGCGCTAACG CCCCTA CGTTAGCTCTACTGTCGA TTAATCTGACGTTAA TERM 638 595934 - 595967 + F 91 -14 -2.58714 | overlap 595931 TAGTGAGGTTTTTTG CAGTAGCGCTAACG CCCCTA CGTTAGCTCTACTG TCGATTAATCTGACG TERM 639 596242 - 596197 - f 75 -10.4 -3.16742 | overlap 596181 GCTAACTGTGAGTAA GCTAGCCCTTCGAATGTCGT CCCTGC AAGGCCGTCGAAGGGCTAGC CTGAAAGCAAGATGG Spea_0485 596272 - 596760 + | NosL family protein Spea_0486 596830 - 598170 + | periplasmic copper-binding Spea_0487 598170 - 599147 + | ABC transporter related TERM 640 599775 - 599797 + G 85 -12.2 -3.41051 | GTCAGACTTCGCTTT TGTTAATCAG TTC CTGATTAACA TTCTCATCGCCATGA Spea_0488 599149 - 599994 + | copper ABC transporter, permease protein TERM 641 600089 - 600108 + F 93 -11.4 -4.18197 | overlap 600090 AACACTGACGATGAT TGGCCGCT CAAT AGCGGCCG TTTTGAGTCGAAAAT TERM 642 600090 - 600107 + F 85 -12.7 -3.10597 | overlap 600089 ACACTGACGATGATT GGCCGCT CAAT AGCGGCC GTTTTGAGTCGAAAA Spea_0489 600202 - 601485 + | transcriptional regulator, CadC TERM 643 601550 - 601564 + T 72 -10 -2.71712 | overlap 601549 TAACGATTAGCATCA TGGGAC TGC GTCCCA CTTTGGAAGCCCACG TERM 644 601573 - 601590 + T 93 -9.1 -5.252 | CGTCCCACTTTGGAA GCCCACG GTTA TGTGGGC TTTTTTGTGCCCGTA TERM 645 601691 - 601677 - T 77 -8.6 -3.93742 | opp_overlap 601676 TTCAGAGAAAGACAA TCAAGC TGC GCTTGA CCTTTAAGTTAGACT TERM 646 601907 - 601880 - T 72 -8.4 -3.53012 | overlap 601884 TCCTGCCCCGCGAAA GCTACGCCCACA TCCA TGTGGGCATCAC GACTATTTCTTCAAC TERM 647 601903 - 601884 - T 72 -10 -2.64155 | overlap 601880 GCCCCGCGAAAGCTA CGCCCACA TCCA TGTGGGCA TCACGACTATTTCTT Spea_0490 603084 - 602626 - | hypothetical protein TERM 648 602898 - 602911 + g 76 -2.3 -5.4477 | opp_overlap 602898 CAAGTGTATGACTAA GCCCT TTAT AGGCC TTTTTTTCACCATTT Spea_0491 603382 - 603137 - | hypothetical protein Spea_0492 603830 - 604135 + | hypothetical protein Spea_0493 604921 - 604262 - | lysine exporter protein LysE/YggA Spea_0494 605426 - 605563 + | hypothetical protein Spea_0495 605743 - 605913 + | hypothetical protein TERM 649 606204 - 606231 + F 82 -10.6 -3.53012 | opp_overlap 606201, overlap 606208 ATTGGAATCAATCGC GTGATGCCGACA GGGA TGTCGGCATAGC TTTCGCGGGGCAGGA TERM 650 606208 - 606227 + F 81 -12.2 -2.64155 | opp_overlap 606201, overlap 606204 GAATCAATCGCGTGA TGCCGACA GGGA TGTCGGCA TAGCTTTCGCGGGGC TERM 651 606861 - 606885 + G 76 -8.8 -3.68244 | opp_overlap 606863 AAGCGAGCTGGCTAA TATCAATCTA ACAGA TAGATTGATA TTTAAAGTTGGTCAT Spea_0496 606457 - 607014 + | hypothetical protein TERM 652 607103 - 607089 - f 73 -10 -2.91144 | opp_overlap 607089, overlap 607086 TTAGCTCTTAAAGTA TCAGCC GTA GGCTGA TTTATTGTAGGAAAG TERM 653 607089 - 607103 + F 89 -10 -4.30719 | opp_overlap 607089 607086 TTAGCTCTTAAAGTA TCAGCC GTA GGCTGA TTTATTGTAGGAAAG Spea_0497 607120 - 608490 + | FNIP TERM 654 608590 - 608617 + F 72 -8.4 -3.55622 | opp_overlap 608585, overlap 608594 ATAAACCAGAGTCAG GTGATGCCGACA TGGA TGTCGGCGTAGC TTTCGCGGGGTTGGC TERM 655 608594 - 608613 + F 72 -10 -2.64274 | opp_overlap 608585, overlap 608590 ACCAGAGTCAGGTGA TGCCGACA TGGA TGTCGGCG TAGCTTTCGCGGGGT TERM 656 608710 - 608724 + F 70 -8.6 -3.33696 | overlap 608700 608699 CCTCATGACGCTTTA TCAAGC GTC GCTTGA TTGCTTAAAACAAAG TERM 657 611313 - 611301 - g 70 -4.8 -4.37658 | AAGCTCGGTAGAAAA TGCC TATGT GGCA AGCCAGATCCAAAGT Spea_0498 608893 - 611712 + | hypothetical protein TERM 658 613124 - 613114 - g 80 -6.8 -4.56775 | ATCGGTGTTGAAAAA GCCA CTA TGGC ACTAAACCTAATGCC Spea_0499 612325 - 613329 + | hypothetical protein TERM 659 613360 - 613387 + F 87 -4.8 -5.5112 | gap 1 TATTATCACCCTCAA TCCCCCGCAGG CTCACCA CCA-CGGGGGA TTTTTTATTGGTAAA TERM 660 613785 - 613801 + F 73 -9.5 -3.2661 | opp_overlap 613784 613783 613794, overlap 613777 613791 TATGAATCATTAATC TTGGAGT AAC ACTCCAA TTGAATGTTATTTAC Spea_0500 614099 - 614428 + | ferredoxin Spea_0501 614605 - 615147 + | RNA polymerase sigma factor SigZ TERM 661 615487 - 615466 - g 79 -8.1 -4.2528 | gap 1, overlap 615484 CCTGAAGTTAATAAA TCTG-CTTGC CGT GCAAGACAGA GAGCCTGGGTGTATC Spea_0502 615214 - 615927 + | glutathione S-transferase domain-containing protein TERM 662 615984 - 615954 - f 100 -14.8 -3.36175 | opp_overlap 615955, overlap 615955 AAGAAAGGCTGAGAA GGCTATGGGACCAA AAT TTGGCCCCATAGCT TGGGTATTGACGCTG TERM 663 615983 - 615955 - f 100 -18.3 -2.60982 | opp_overlap 615955, overlap 615954 AGAAAGGCTGAGAAG GCTATGGGACCAA AAT TTGGCCCCATAGC TTGGGTATTGACGCT TERM 664 615955 - 615983 + F 100 -16.1 -3.18728 | opp_overlap 615954 615955 AGAAAGGCTGAGAAG GCTATGGGACCAA AAT TTGGCCCCATAGC TTGGGTATTGACGCT TERM 665 616485 - 616502 + F 72 -3.3 -5.04265 | overlap 616486 TCTAATGGATTTTTA ACTGTGC TGTA GCGCAGG TTTTTACTGTTTTTT Spea_0503 616645 - 618675 + | cytochrome c, putative TERM 666 618730 - 618690 - f 100 -22.7 -3.17194 | AGCCGCCTAACTTAA TCGCCTCGGCCGCCATTGC AGT GCAATGACTGCCGAGGCAA TAGAGAGAAAAATGA Spea_0504 618715 - 619173 + | rhodanese domain-containing protein Spea_0505 619233 - 620018 + | peptidylprolyl isomerase FKBP-type Spea_0506 620104 - 620817 + | TPR repeat-containing protein Spea_0507 620880 - 621590 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Spea_0508 621593 - 622540 + | polysulphide reductase NrfD TERM 667 622528 - 622561 + F 70 -8.9 -3.25169 | opp_overlap 622528 622527 ATATGCAGGCCAAAT CTTTGCTATCTAGCC CTGA GGCAAGTTAGTAAAG TTGGTGAGTTGTTCG Spea_0509 622713 - 623201 + | NosL family protein TERM 668 624334 - 624355 + G 73 -9.5 -3.35813 | opp_overlap 624329 624328 624339, overlap 624339 AGTCATCAAGGCCGA GGTAACCAC TGGA GTGGTTATC TTGGTTGGGATCACA Spea_0510 623257 - 624576 + | periplasmic copper-binding Spea_0511 624672 - 625580 + | ABC transporter related TERM 669 625741 - 625760 + G 73 -10.8 -3.00498 | overlap 625755 625756 625757 CTCGCCATCCCCGAG CTCGACAT CTTG ATGTCGAG TCTGTCTACAGTCTC Spea_0512 625582 - 626406 + | ABC-2 type transporter Spea_0513 626672 - 627955 + | transcriptional regulator, CadC TERM 670 628149 - 628176 + F 90 -9.2 -4.91084 | gap 1, opp_overlap 628153 AGCCCGCCCTCGCAG CGAAGCGCCCTAG GAT CTAGGTC-CTTCG TTTTTGCCTTTTCTT TERM 671 628367 - 628321 - f 73 -9.6 -3.10796 | opp_overlap 628321 628318 628316 CTGCACCATGCAATA TCGAAACGTTTCGATTACTCTC GTC AAATCTTATCGAAACGTTTCGA TCGTTGTTTTACGGC Spea_0514 628444 - 628863 + | D-ribose pyranase TERM 672 630192 - 630178 - g 72 -2.8 -5.00616 | opp_overlap 630180, overlap 630180 GTTGGCGCGAAAAAA GAGATC TAC GATCTT ATCAATCGATTCAAA Spea_0515 628882 - 630387 + | D-ribose transporter ATP binding protein Spea_0516 630384 - 631358 + | ribose ABC transporter permease protein Spea_0517 631445 - 632344 + | D-ribose transporter subunit RbsB Spea_0518 632466 - 633389 + | ribokinase TERM 673 633434 - 633398 - f 79 -11.1 -3.22884 | opp_overlap 633386 633396 633399, overlap 633399 GCAGTAACTTATCAA GTGACTCTTTTTTTGAA GCT TTCAAATAAAGAGTCAT CAATTAAATCGGCAT TERM 674 633399 - 633433 + F 95 -14.6 -2.54896 | opp_overlap 633398 633399, overlap 633386 633396 CAGTAACTTATCAAG TGACTCTTTTTTTGAA GCT TTCAAATAAAGAGTCA TCAATTAAATCGGCA TERM 675 633433 - 633399 - f 95 -14.6 -2.53409 | opp_overlap 633386 633399 633396, overlap 633398 CAGTAACTTATCAAG TGACTCTTTTTTTGAA GCT TTCAAATAAAGAGTCA TCAATTAAATCGGCA Spea_0519 633517 - 634521 + | LacI family transcription regulator TERM 676 634575 - 634538 - T 79 -3.5 -5.45652 | gap 1, opp_overlap 634562 AGGGCGAATAAAAAA GGCGAATGAATCAGCT TGGTAAT AG-TGAGCCACTCGCC TTTAATAACTGATTT TERM 677 634584 - 634600 + T 73 -8.1 -3.85817 | opp_overlap 634584 ACTCGCCTTTAATAA CTGATTT ATA AAATCAG TTTATACAGAAAGCT Spea_0520 635325 - 634615 - | FMN reductase Spea_0521 636916 - 635435 - | UbiD family decarboxylase Spea_0522 637137 - 637706 + | hypothetical protein Spea_0523 637794 - 638384 + | hypothetical protein Spea_0524 638981 - 638457 - | GCN5-related N-acetyltransferase Spea_0525 639576 - 639013 - | redoxin domain-containing protein TERM 678 640562 - 640536 - g 74 -7.3 -4.36914 | opp_overlap 640536 TGTGTCGGTAGAAAA CCTTGTCGAAC TGCCT GTTCATCAAGG TTTAGTATTCGCGTC Spea_0526 640018 - 641220 + | aromatic amino acid transporter TERM 679 641480 - 641501 + F 100 -14.5 -4.86133 | opp_overlap 641480 CACATTCAAGATGAA GGGCTACTC GAAA GAGTAGCCC TTTTTCGTATCTGTA TERM 680 641501 - 641480 - f 100 -14.5 -3.38786 | opp_overlap 641480 CACATTCAAGATGAA GGGCTACTC GAAA GAGTAGCCC TTTTTCGTATCTGTA TERM 681 641585 - 641604 + F 100 -13.6 -4.84527 | opp_overlap 641585 GCCACATTTAGAAAA GCCCGCTA TTTA TAGCGGGC TTTTTGCTATCTGCG TERM 682 641604 - 641585 - f 100 -13.6 -4.45083 | opp_overlap 641585 GCCACATTTAGAAAA GCCCGCTA TTTA TAGCGGGC TTTTTGCTATCTGCG TERM 683 641722 - 641699 - f 76 -11 -2.65815 | opp_overlap 641699 641701 GCCACATTCAGATGA GGCCCTAGCA GAAA TGCTAGGGGC TTTTTCGTATCTGTA TERM 684 641699 - 641722 + F 93 -11 -4.86133 | opp_overlap 641699, overlap 641701 GCCACATTCAGATGA GGCCCTAGCA GAAA TGCTAGGGGC TTTTTCGTATCTGTA TERM 685 641701 - 641720 + F 81 -12.2 -2.69273 | opp_overlap 641699, overlap 641699 CACATTCAGATGAGG CCCTAGCA GAAA TGCTAGGG GCTTTTTCGTATCTG TERM 686 641816 - 641849 + F 93 -12.5 -3.79849 | opp_overlap 641816 CCACATTTAGAGAAA GGGCTTCCACTCT GGTAATAG AGAGCGGAAGCCC TTCTTCGTATGGTTA TERM 687 641849 - 641816 - f 100 -14.7 -4.07868 | opp_overlap 641816 CCACATTTAGAGAAA GGGCTTCCACTCT GGTAATAG AGAGCGGAAGCCC TTCTTCGTATGGTTA TERM 688 641946 - 641969 + F 100 -16.8 -4.86133 | opp_overlap 641946 CACATTCAAGATGAA GCCCCTAGCA GAAA TGCTAGGGGC TTTTTCGTATCTGTA TERM 689 641969 - 641946 - f 100 -16.8 -3.38786 | opp_overlap 641946 CACATTCAAGATGAA GCCCCTAGCA GAAA TGCTAGGGGC TTTTTCGTATCTGTA TERM 690 642061 - 642094 + F 93 -12.5 -3.79849 | opp_overlap 642061 GCCCATTTAGAGAAA GGGCTTCCACTCT GGTAATAG AGAGCGGAAGCCC TTCTTCGTATGGTTA TERM 691 642094 - 642061 - f 100 -14.7 -4.0641 | opp_overlap 642061 GCCCATTTAGAGAAA GGGCTTCCACTCT GGTAATAG AGAGCGGAAGCCC TTCTTCGTATGGTTA TERM 692 642189 - 642211 + F 90 -9.9 -4.39166 | gap 1, opp_overlap 642189, overlap 642189 GCCATATTCAGATGA GG-CCCAGCA GAAA TGCTGGGGCC TTTTCGTATCTACGA TERM 693 642189 - 642210 + F 75 -10.1 -3.23018 | opp_overlap 642189, overlap 642189 GCCATATTCAGATGA GGCCCAGCA GAAA TGCTGGGGC CTTTTCGTATCTACG TERM 694 642210 - 642189 - f 72 -10.1 -2.65815 | opp_overlap 642189 642189 GCCATATTCAGATGA GGCCCAGCA GAAA TGCTGGGGC CTTTTCGTATCTACG TERM 695 642338 - 642305 - f 83 -8.9 -3.98661 | opp_overlap 642305, overlap 642327 CACATTTAGGAGAAA GGGCTTCCAGTCT GGTAATAA AGAGCGGAAGCCC TTCTTCGTATGGTTA TERM 696 642549 - 642562 + F 70 -3.1 -4.83615 | gap 1, overlap 642548 642546 TTTTAGTAAGAACGG CTC-GC TGC GCTGAG TTTTTGTGCAAACTC TERM 697 642735 - 642770 + F 100 -15.6 -3.08813 | opp_overlap 642742, overlap 642742 CCCTCCGCCACATTT AGAGAAAGGGCTTCCA GTAA TGGAAGCCCTTTTTCG TATGTTCAAATAAAA TERM 698 642742 - 642763 + F 100 -14.5 -4.87807 | opp_overlap 642742, overlap 642735 CCACATTTAGAGAAA GGGCTTCCA GTAA TGGAAGCCC TTTTTCGTATGTTCA TERM 699 642763 - 642742 - f 100 -14.5 -4.07868 | opp_overlap 642742 642735 CCACATTTAGAGAAA GGGCTTCCA GTAA TGGAAGCCC TTTTTCGTATGTTCA TERM 700 642890 - 642877 - f 71 -6.7 -4.11304 | opp_overlap 642877 642876 642883 GCAATTTATAAAGAA GAACC CTAG GGTTC CTGTTTGCTTGAGTT TERM 701 642945 - 642966 + F 95 -11.5 -4.86133 | opp_overlap 642944 CCATATTCAGATGAG GCCCCAGCA GAAA TGCAGGGGC TTTTTCGTATCTGTA Spea_0527 643519 - 644862 + | glutamate dehydrogenase TERM 702 644879 - 644904 + F 75 -10.5 -3.24146 | opp_overlap 644885, overlap 644885 ATAGATAGTGTGTTT TTAAAAGGGCC TTAT GGCCCTTTTTA CTTTTGATTCAAACA TERM 703 644898 - 644885 - f 86 -9.5 -4.07687 | opp_overlap 644879 644885 AGTGTGTTTTTAAAA GGGCC TTAT GGCCC TTTTTACTTTTGATT TERM 704 644885 - 644898 + F 93 -9.5 -5.13016 | opp_overlap 644885, overlap 644879 AGTGTGTTTTTAAAA GGGCC TTAT GGCCC TTTTTACTTTTGATT TERM 705 645744 - 645727 - f 73 -8.5 -3.6215 | overlap 645742 TTAAGTTATTCGAAA TTGTCTC TCAC GAGACAA TCAAAAATTGACTTA TERM 706 647543 - 647576 + F 73 -7 -4.15854 | TCCACTCTGACCCAC CAAAATCTTTATTT TCTCCT AAAGAAAGATTTTG TTTTAACGTAAATTT TERM 707 647767 - 647735 - f 79 -10.8 -3.12142 | opp_overlap 647736, overlap 647733 647731 647742 TGCACAGGTAAGAGA TGCCAAAGATAAAT GCAGA ATTTATCTTTGGCT TTTTTAAGCCCGCTC TERM 708 647736 - 647766 + F 100 -14.3 -5.00884 | opp_overlap 647735 647733 647731 647742 GCACAGGTAAGAGAT GCCAAAGATAAAT GCAGA ATTTATCTTTGGC TTTTTTAAGCCCGCT TERM 709 648506 - 648494 - f 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 710 649304 - 649288 - f 86 -9.4 -4.08546 | overlap 649301 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 711 649810 - 649799 - f 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 712 651216 - 651258 + F 100 -19.5 -3.48276 | gap 1, opp_overlap 651216 651226, overlap 651219 651226 TTTCCAGGCGCCAAA TAACG-AGAAAGCCCGTTGC TAAA GCAACGGGCTTTTTTCGTTA TTGTCTGGAAAGGGG TERM 713 651258 - 651216 - f 100 -17.3 -3.55444 | gap 1, opp_overlap 651216 651219 651226, overlap 651226 TTTCCAGGCGCCAAA TAACG-AGAAAGCCCGTTGC TAAA GCAACGGGCTTTTTTCGTTA TTGTCTGGAAAGGGG TERM 714 651219 - 651255 + F 100 -16.8 -3.88232 | gap 1, opp_overlap 651216 651226, overlap 651216 651226 CCAGGCGCCAAATAA CG-AGAAAGCCCGTTGC TAAA GCAACGGGCTTTTTTCG TTATTGTCTGGAAAG TERM 715 651226 - 651247 + F 100 -15.9 -5.39221 | opp_overlap 651226 651216, overlap 651219 651216 CCAAATAACGAGAAA GCCCGTTGC TAAA GCAACGGGC TTTTTTCGTTATTGT TERM 716 651247 - 651226 - f 100 -15.9 -4.17537 | opp_overlap 651219 651216 651226, overlap 651216 CCAAATAACGAGAAA GCCCGTTGC TAAA GCAACGGGC TTTTTTCGTTATTGT TERM 717 651478 - 651441 - f 100 -17.1 -3.81755 | opp_overlap 651442 651449, overlap 651442 651449 ATTCTCGAAAGAGAA GCGATAAAGCCCGTTGC TAAT GCAACGGGCTTTTTCGT ATATGTGTCCCGTCC TERM 718 651477 - 651442 - f 100 -20.6 -2.88571 | opp_overlap 651442 651449, overlap 651441 651449 TTCTCGAAAGAGAAG CGATAAAGCCCGTTGC TAAT GCAACGGGCTTTTTCG TATATGTGTCCCGTC TERM 719 651442 - 651477 + F 100 -20.6 -3.05498 | opp_overlap 651442 651441 651449, overlap 651449 TTCTCGAAAGAGAAG CGATAAAGCCCGTTGC TAAT GCAACGGGCTTTTTCG TATATGTGTCCCGTC TERM 720 651470 - 651449 - f 100 -15.9 -4.0174 | opp_overlap 651442 651449, overlap 651442 651441 AAGAGAAGCGATAAA GCCCGTTGC TAAT GCAACGGGC TTTTTCGTATATGTG TERM 721 651449 - 651470 + F 100 -15.9 -4.86133 | opp_overlap 651449 651442 651441, overlap 651442 AAGAGAAGCGATAAA GCCCGTTGC TAAT GCAACGGGC TTTTTCGTATATGTG TERM 722 651839 - 651884 + F 87 -8.6 -4.53303 | opp_overlap 651839 AAATATATAATTAAA GGGTTACCGATATCT-AATACT GGGC AGTATTCAGACA-CGGTAGCCC TTTTCTGTACAAGTA TERM 723 651884 - 651839 - f 79 -8.6 -4.08872 | opp_overlap 651839 AAATATATAATTAAA GGGTTACCGATATCT-AATACT GGGC AGTATTCAGACA-CGGTAGCCC TTTTCTGTACAAGTA TERM 724 652425 - 652461 + G 76 -5.1 -4.84017 | overlap 652426 CAGTCTTCTGGAGCC ATTGTTGTCGGTTGCAA AGT TAGCAACAGACACCAAC TTTTTATCGGCAGTT Spea_0528 651937 - 653757 + | hypothetical protein TERM 725 653803 - 653769 - T 95 -13.8 -3.66784 | opp_overlap 653772, overlap 653772 GTAGTTTTAATACAA TAACCGAGTGAGAC TTAGTTT ATCTCACTCGGTTA TGAACACCTTTATAG TERM 726 653800 - 653772 - T 86 -11.1 -3.9644 | opp_overlap 653772, overlap 653769 GTTTTAATACAATAA CCGAGTGAGAC TTAGTTT ATCTCACTCGG TTATGAACACCTTTA TERM 727 653772 - 653800 + T 77 -10.4 -3.30635 | opp_overlap 653769 653772 GTTTTAATACAATAA CCGAGTGAGA CTTAGTTTA TCTCACTCGG TTATGAACACCTTTA Spea_0529 655044 - 653848 - | putative plasmid transfer protein TERM 728 654533 - 654502 - G 81 -12.4 -3.18264 | gap 1 GGTTTCAGCGATTAA CACTCCCATCGTCAG TGC CTG-CGATGTGAGTG AGCCATTCTCAATGA Spea_0530 655536 - 656162 + | hypothetical protein Spea_0531 656550 - 656197 - | hypothetical protein Spea_0532 657342 - 656680 - | short-chain dehydrogenase/reductase SDR Spea_0533 657849 - 657397 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein Spea_0534 658310 - 657864 - | 3-dehydroquinate dehydratase, type II Spea_0535 658905 - 658483 - | hypothetical protein Spea_0536 659098 - 659469 + | hypothetical protein Spea_0537 659541 - 659717 + | hypothetical protein Spea_0538 659872 - 660309 + | hypothetical protein TERM 729 660845 - 660833 - g 76 -9.1 -3.82083 | opp_overlap 660844, overlap 660806 TTAGCAGAAGTCAAA GCGCA AGC TGCGC GTCGTCAGCAGGCAT Spea_0539 660602 - 661948 + | outer membrane efflux family protein, putative Spea_0540 661959 - 663338 + | RND family efflux transporter MFP subunit Spea_0541 663351 - 666575 + | CzcA family heavy metal efflux protein TERM 730 666581 - 666614 + T 100 -16.1 -2.83343 | CCGTAAGTAATGCTT GTTTGCCTGTGGCTC ACTT GAGCTGCAGGCAGAC TGTAGTAATAGCTAT TERM 731 666844 - 666865 + T 93 -10.1 -4.71382 | overlap 666845 CTAGCTTATTTAGTA CGCGGAGCA GGAG TGCTCCGCA TTTTTCCATCATTCT TERM 732 666845 - 666864 + T 95 -13.6 -3.41745 | overlap 666844 TAGCTTATTTAGTAC GCGGAGCA GGAG TGCTCCGC ATTTTTCCATCATTC Spea_0542 667179 - 666874 - | hypothetical protein TERM 733 667259 - 667239 - H 70 -9.1 -3.09933 | opp_overlap 667242, overlap 667243 TGTTAACTGACGCAA TAAACAGTC AAA GACTGCTTA GATAGAGCGACTAGC TERM 734 667255 - 667243 - H 77 -7.7 -4.21631 | opp_overlap 667242, overlap 667239 AACTGACGCAATAAA CAGTC AAA GACTG CTTAGATAGAGCGAC TERM 735 668315 - 668297 - g 100 -5.2 -5.93252 | overlap 668309 668310 CCTAAAAAGAAAAAA GCCAAGGT TAA ACCTGAGC AGTGCTCGCGAATGA Spea_0543 667460 - 668344 + | penicillin-insensitive murein endopeptidase TERM 736 668363 - 668346 - T 70 -5.5 -4.46112 | opp_overlap 668358 668361, overlap 668358 TTGCAGCCAAATAAA GGCCCGT AAAA ACAAGCC GCCAACAGTGACTCT TERM 737 668358 - 668389 + T 83 -12.4 -2.9162 | gap 1, opp_overlap 668346 668358, overlap 668361 AAAGGCCCGTAAAAA CAAGCCGCC-AACAG TGA CTCTTCGGCGGCTTG TGATTTCAACACTTG TERM 738 668389 - 668358 - T 100 -12.4 -4.58685 | gap 1, opp_overlap 668358 668361, overlap 668346 AAAGGCCCGTAAAAA CAAGCCGCC-AACAG TGA CTCTTCGGCGGCTTG TGATTTCAACACTTG TERM 739 668361 - 668386 + T 72 -8.3 -3.60151 | gap 1, opp_overlap 668346 668358, overlap 668358 GGCCCGTAAAAACAA GCCGCC-AACAG TGA CTCTTCGGCGGC TTGTGATTTCAACAC Spea_0544 670744 - 668459 - | aminotransferase class V TERM 740 670995 - 670982 - R 100 -5.9 -6.10295 | opp_overlap 670982 TTAACATAAAAAAAA CGCCC ATCT AGGCG CTTTTTAGAAGAAGG Spea_0545 671570 - 671034 - | hypothetical protein TERM 741 671284 - 671265 - G 78 -5 -5.06451 | CATTATGGCAAAAAA CTGTTGAA CATT TGCAACAG TAGGCTGTTTCCAGT Spea_0546 672139 - 671678 - | hypothetical protein Spea_0547 672400 - 673461 + | hypothetical protein Spea_0548 673614 - 674207 + | ATP-dependent protease La TERM 742 674340 - 674379 + F 71 -6.5 -4.29396 | gap 1, opp_overlap 674341, overlap 674341 CAGCTAGATATAGAA TGGCCT-GATTTGAGAGC CTCCT GCTCTAGAGTCGAGGCCG TTTTGATAACTAGTT TERM 743 674430 - 674446 + F 73 -2.3 -5.1861 | overlap 674431 CAGATGGCAGATTGT TTATTGA TAG TCGATAG TTTTTTGATAGTAGA TERM 744 674793 - 674779 - g 84 -5 -5.27335 | opp_overlap 674788 674792, overlap 674792 CCTTTCAAAGAAAAA TGCTTG TTG CAAACA GACGAGTTTCTGTTG Spea_0549 674518 - 675456 + | pseudouridine synthase Spea_0550 677605 - 675719 - | hypothetical protein Spea_0551 677716 - 678639 + | dTDP-4-dehydrorhamnose reductase Spea_0552 678668 - 679990 + | histidine kinase Spea_0553 679983 - 680522 + | two component Fis family transcriptional regulator TERM 745 680620 - 680657 + T 77 -10.8 -2.88544 | gap 1, opp_overlap 680631, overlap 680622 680631 CTGTGGCTTAGCGAT GACCACAATACTTAGGG GGGTG CCCAAA-TATTGTGGTC TATATAACGCTAAAG Spea_0554 681853 - 680705 - | sulphate transporter TERM 746 682086 - 682063 - R 85 -8.9 -4.29981 | opp_overlap 682063 GAAACATAGTGAAAA GCCCAGAGT GGTTAA ACTCTAGGC TTTTTTATCTATATG TERM 747 682063 - 682086 + r 93 -6.7 -5.4492 | opp_overlap 682063 GAAACATAGTGAAAA GCCCAGAGT GGTTAA ACTCTAGGC TTTTTTATCTATATG Spea_0555 682851 - 682132 - | short-chain dehydrogenase/reductase SDR Spea_0556 682998 - 683912 + | LysR family transcriptional regulator TERM 748 685273 - 685303 + G 74 -8.2 -3.87075 | opp_overlap 685272 685271, overlap 685274 TTGGTGATGACAATG CGGTAGGAGGCGTG CTG CAAACCTCCTACCA TTTCTAACCAGTGCT TERM 749 685274 - 685302 + G 77 -11.7 -2.91924 | opp_overlap 685272 685271, overlap 685273 TGGTGATGACAATGC GGTAGGAGGCGTG CTG CAAACCTCCTACC ATTTCTAACCAGTGC Spea_0557 684117 - 685310 + | putative plasmid transfer protein Spea_0558 686048 - 685317 - | hypothetical protein TERM 750 685372 - 685403 + g 89 -11 -4.03234 | opp_overlap 685378 685379, overlap 685379 AGAGCGCTACAACCA CATAAAGCCAGAGT TAAC ACTCTGGTTTTTTG TTTGTCTACACGGCC TERM 751 685379 - 685396 + g 100 -9.9 -5.76237 | opp_overlap 685378 685379, overlap 685372 TACAACCACATAAAG CCAGAGT TAAC ACTCTGG TTTTTTGTTTGTCTA TERM 752 685396 - 685379 - G 70 -9.9 -3.08671 | opp_overlap 685379 685372, overlap 685378 TACAACCACATAAAG CCAGAGT TAAC ACTCTGG TTTTTTGTTTGTCTA TERM 753 686210 - 686180 - R 100 -21.4 -4.67234 | opp_overlap 686187 ATTCAAGGCCAAAAA CAGATAAGGACTGC TAA GCAGTCCTTATCTG AAGATCACGTTTGTC TERM 754 686187 - 686203 + r 90 -12.3 -3.49475 | opp_overlap 686180 GCCAAAAACAGATAA GGACTGC TAA GCAGTCC TTATCTGAAGATCAC Spea_0559 686555 - 686241 - | transcriptional repressor protein MetJ Spea_0560 686767 - 687927 + | O-succinylhomoserine (thiol)-lyase Spea_0561 687943 - 690336 + | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 755 690349 - 690385 + F 85 -12.6 -3.16387 | gap 1, opp_overlap 690359, overlap 690359 TAATTTTCACGTTAA TCAATAGAAA-GGGCTC ATTT GAGCCCTTTTTTATTGA CTTGTTTATTATGAT TERM 756 690359 - 690374 + F 100 -10.4 -5.5074 | opp_overlap 690359, overlap 690349 GTTAATCAATAGAAA GGGCTC ATTT GAGCCC TTTTTTATTGACTTG TERM 757 690374 - 690359 - f 89 -10.4 -4.2772 | opp_overlap 690359 690349 GTTAATCAATAGAAA GGGCTC ATTT GAGCCC TTTTTTATTGACTTG TERM 758 691084 - 691057 - g 72 -5.7 -4.44355 | gap 2 TAATCTTAAAAAGAA GATAGACGCTGGT GCCA ACC-GCG-CTATC ACTCAGTTTTTCTTC Spea_0562 690542 - 691432 + | 5,10-methylenetetrahydrofolate reductase TERM 759 691462 - 691486 + F 100 -13.7 -5.45802 | opp_overlap 691454 691467 TAAGTGATTTATTGA GCCAATAACCT CGT AGGTTGTTGGC TTTTTGTTTTAGAGA TERM 760 691945 - 691961 + G 75 -2.9 -5.1963 | overlap 691946 CTAGAGTGTCGAGCA CTCGCCT ATG AGGTGAA TTTTTCTTAGTTAGG Spea_0563 691591 - 691971 + | hypothetical protein Spea_0564 692027 - 692311 + | hypothetical protein TERM 761 692402 - 692417 + G 85 -6.8 -4.93454 | CGCGTTCTCAATCTT CCGAGT TTAA GCTCGG TTTTATCTTTGTTTC TERM 762 692773 - 692783 + G 71 -6.8 -4.13014 | CGACTGAATGCATTC CAGC TTA GCTG TTTTGCGACTCTGGC Spea_0565 692368 - 693345 + | hypothetical protein TERM 763 693374 - 693391 + T 93 -8.4 -5.30686 | opp_overlap 693374, overlap 693389 AGCTTGAAACAAGAA GCCACC TTTAAT GGTGGC TTTTTTATGCCTCTT TERM 764 693391 - 693374 - T 79 -8.4 -4.08958 | opp_overlap 693374 693389 AGCTTGAAACAAGAA GCCACC TTTAAT GGTGGC TTTTTTATGCCTCTT TERM 765 693796 - 693827 + T 90 -13.2 -2.56271 | opp_overlap 693797 693804, overlap 693804 TCTTTATCACAGACA ATAAAAAAGGAGCC GATT GGCTCCTTTTTTAG ATCTTATCATGAAAC TERM 766 693826 - 693797 - T 100 -16.7 -3.61902 | opp_overlap 693796 693804, overlap 693804 CTTTATCACAGACAA TAAAAAAGGAGCC GATT GGCTCCTTTTTTA GATCTTATCATGAAA TERM 767 693804 - 693819 + T 93 -10.4 -5.17054 | opp_overlap 693797 693804, overlap 693796 ACAGACAATAAAAAA GGAGCC GATT GGCTCC TTTTTTAGATCTTAT TERM 768 693819 - 693804 - T 100 -10.4 -5.62045 | opp_overlap 693804 693796, overlap 693797 ACAGACAATAAAAAA GGAGCC GATT GGCTCC TTTTTTAGATCTTAT Spea_0566 695735 - 693864 - | DEAD/DEAH box helicase domain-containing protein TERM 769 694412 - 694445 + g 80 -6.8 -4.68506 | opp_overlap 694387, overlap 694414 GGCTATCGCGTTGAC GTTCGTTCATTGTA TGTAGT TGCAATGGACGATC TTTTTGCACTTGCTT TERM 770 694414 - 694443 + g 71 -8 -3.94933 | opp_overlap 694387, overlap 694412 CTATCGCGTTGACGT TCGTTCATTGTA TGTAGT TGCAATGGACGA TCTTTTTGCACTTGC Spea_0567 696921 - 695953 - | peptidase M28 TERM 771 696974 - 697001 + r 71 -4.2 -4.92777 | overlap 696972 696976 GTCTTGTATAGAGGT TAGTCGCTAG CTATCTGA TTAGCGACTG TTTTTCATTGATGTT Spea_0568 697319 - 696984 - | hypothetical protein TERM 772 697106 - 697091 - G 77 -10.4 -3.34983 | overlap 697089 GTAAGCGAGAGAACA GCCGCT TCTT AGCGGC AACCTTAATCAGAGA TERM 773 697266 - 697291 + g 76 -11.9 -2.71011 | opp_overlap 697269 CACGGCAATAAGCAA CAAGCCTAGTG TCAT CACTAGGCTAG TGCTTAAGAAAAGGT TERM 774 697288 - 697269 - G 95 -12.2 -3.89957 | opp_overlap 697266 GGCAATAAGCAACAA GCCTAGTG TCAT CACTAGGC TAGTGCTTAAGAAAA Spea_0569 700180 - 697337 - | excinuclease ABC, A subunit TERM 775 698118 - 698142 + g 78 -5.7 -4.77165 | TCTATATCGACCACT TTGTCGCAATG ATC CATGCCGACAA TTTTCTTGTAAGGAG TERM 776 698749 - 698731 - G 71 -7.5 -3.95073 | CGGCAGAGCGAGAAA GGCTTAA GTAAT TTAAGCC AACGTTAACGAGGAA TERM 777 700018 - 700030 + g 72 -9.1 -3.51329 | opp_overlap 700016 700014 AGGCCGACAATGACT CGACG TAG CGTCG TTGTCCTTCAGCGTA TERM 778 700640 - 700655 + G 72 -9 -3.56562 | GCAAGCGGTTCTGCA GATCCC TATG GGGATC TTATCTGATAAGTTT Spea_0570 700446 - 701813 + | major facilitator transporter Spea_0571 701847 - 702515 + | single-strand binding protein TERM 779 702571 - 702593 + T 100 -11.3 -5.42131 | opp_overlap 702571 GACGGTTTTTATTAA GCCAGTTGG AACTC CCGACTGGC TTTTTTATGTACTTC TERM 780 702593 - 702571 - T 73 -9.8 -3.14344 | opp_overlap 702571 GACGGTTTTTATTAA GCCAGTTGGA ACT CCCGACTGGC TTTTTTATGTACTTC Spea_0572 703295 - 702567 - | integrase catalytic region TERM 781 703412 - 703445 + r 80 -2.4 -5.64274 | overlap 703413 ACTTTATGGTGCCTT TTACTTTGGCGAAC CAGAGC GTTCGGCTAAGTAC TTTTTTTCTAAATCG Spea_0573 703795 - 703412 - | transposase TERM 782 703877 - 703848 - R 100 -12.3 -4.16301 | opp_overlap 703854 703875, overlap 703854 GACATTACATATAAA GAAAAAGCTCCCT GTTC AGGGAGCTTTTTT TTGCCAAAAATTTAA TERM 783 703871 - 703854 - R 100 -11.3 -5.4433 | opp_overlap 703854, overlap 703848 ACATATAAAGAAAAA GCTCCCT GTTC AGGGAGC TTTTTTTTGCCAAAA TERM 784 703854 - 703871 + r 100 -11.3 -5.75342 | opp_overlap 703854 703848 ACATATAAAGAAAAA GCTCCCT GTTC AGGGAGC TTTTTTTTGCCAAAA Spea_0574 704645 - 703914 - | putative cation efflux protein TERM 785 703948 - 703959 + g 73 -4.4 -4.88405 | overlap 703937 TTGTCGAGGATAGCC TGGT ATTC ACCA TTTTGTTTGAGGCTT Spea_0575 705180 - 705593 + | hypothetical protein TERM 786 705605 - 705634 + T 100 -14.5 -3.50447 | opp_overlap 705609 705612, overlap 705609 TTAATCAATAAGAGT TAAATAACAGCGC CTAG GCGCTGTTATTTG TTCTATACCAATTGG TERM 787 705630 - 705609 - T 100 -13.1 -3.81258 | opp_overlap 705605 705609, overlap 705612 TCAATAAGAGTTAAA TAACAGCGC CTAG GCGCTGTTA TTTGTTCTATACCAA TERM 788 705609 - 705630 + T 100 -13.1 -4.38927 | opp_overlap 705609 705612, overlap 705605 TCAATAAGAGTTAAA TAACAGCGC CTAG GCGCTGTTA TTTGTTCTATACCAA TERM 789 705627 - 705612 - T 86 -10.4 -4.01703 | opp_overlap 705609 705605, overlap 705609 ATAAGAGTTAAATAA CAGCGC CTAG GCGCTG TTATTTGTTCTATAC Spea_0576 706683 - 705652 - | aldose 1-epimerase Spea_0577 707874 - 706720 - | galactokinase TERM 790 708183 - 708154 - R 81 -12.2 -2.63301 | opp_overlap 708152, overlap 708143 CACAGCTTGATACCA GCTCCAATACCC GATATA GGGCACTGGAGC AGTAGTTTGCGGTTA Spea_0578 709617 - 708196 - | SSS family solute/sodium (Na+) symporter TERM 791 709767 - 709783 + r 100 -9.4 -5.4492 | opp_overlap 709765 AGGGCGTTAACTATT GCAGGC CTCTA GCCTGC TTTTTTATATCTGTG Spea_0579 709905 - 709762 - | beta-galactosidase TERM 792 709952 - 709968 + r 100 -9.4 -5.4492 | opp_overlap 709950 AGGGCGTTAACTATT GCAGGC CTCTA GCCTGC TTTTTTATATCTGTG Spea_0580 713180 - 709947 - | glycoside hydrolase family protein TERM 793 710389 - 710407 + g 76 -4.5 -4.99638 | opp_overlap 710391, overlap 710391 ATCGGCAGGGCATAC CAGGCAA CAGGA TTGCCGG TTTTTCTATCGGTAT TERM 794 711782 - 711804 + g 83 -14.2 -2.71364 | overlap 711784 GTTCGACTCGCGCTT GATGGGCTGG CAA CCAGCTCATC TCATTACCAAGCTGG TERM 795 711784 - 711802 + g 74 -11 -2.90194 | overlap 711782 TCGACTCGCGCTTGA TGGGCTGG CAA CCAGCTCA TCTCATTACCAAGCT Spea_0581 714136 - 713207 - | WD40 domain-containing protein TERM 796 714070 - 714047 - G 100 -13.9 -3.89212 | GATCCAGATATCAAA CCCAGCAGC CTGAAT GCTGCTGGG AATAAAAAGTAGGCT Spea_0582 715863 - 714205 - | sodium/hydrogen exchanger TERM 797 716040 - 716003 - R 100 -18.7 -3.93583 | opp_overlap 716003 716001 716008, overlap 716008 CAAGCTAGGGATAAA GAAAAGCCCAGCTTATC TGTT GATAAGCTGGGCTTTTA GAAGGGCGTGTTACA TERM 798 716008 - 716035 + r 100 -18.6 -4.07885 | opp_overlap 716003 716008, overlap 716003 716001 TAGGGATAAAGAAAA GCCCAGCTTATC TGTT GATAAGCTGGGC TTTTAGAAGGGCGTG TERM 799 716035 - 716008 - R 100 -18.6 -5.0065 | opp_overlap 716003 716001 716008, overlap 716003 TAGGGATAAAGAAAA GCCCAGCTTATC TGTT GATAAGCTGGGC TTTTAGAAGGGCGTG Spea_0583 717933 - 716101 - | thiol:disulfide interchange protein precursor TERM 800 717016 - 717033 + g 72 -6.3 -4.21194 | overlap 717017 TGAATTCATCTTTTC TTGCCAT TTAG ATGGCAG TTTTAGATCGTACAG TERM 801 717815 - 717799 - G 76 -8 -4.22041 | overlap 717787 AAAGTCGAACACAAA TGCCTG ATCGA CAGGCA TAAGCTCAGGCTCGC Spea_0584 718253 - 717930 - | CutA1 divalent ion tolerance protein Spea_0585 718573 - 719160 + | FxsA cytoplasmic membrane protein Spea_0586 720986 - 719157 - | serine/threonine protein kinase Spea_0587 721203 - 721544 + | hypothetical protein Spea_0588 721765 - 722424 + | thiopurine S-methyltransferase TERM 802 722663 - 722632 - T 78 -11 -2.92668 | opp_overlap 722633 722640, overlap 722640 CATCATTTAACCAGA TCAAAAAAGCGACC CTGA GGTCGCTTTTTTAT GGCTTTAAATCGTTA TERM 803 722633 - 722662 + T 83 -12.3 -2.67016 | opp_overlap 722632 722640, overlap 722640 ATCATTTAACCAGAT CAAAAAAGCGACC CTGA GGTCGCTTTTTTA TGGCTTTAAATCGTT TERM 804 722640 - 722655 + T 100 -10.4 -5.33866 | opp_overlap 722632 722640, overlap 722633 AACCAGATCAAAAAA GCGACC CTGA GGTCGC TTTTTTATGGCTTTA TERM 805 722655 - 722640 - T 100 -10.4 -5.2422 | opp_overlap 722640 722633, overlap 722632 AACCAGATCAAAAAA GCGACC CTGA GGTCGC TTTTTTATGGCTTTA Spea_0589 723733 - 722699 - | porin TERM 806 723978 - 724003 + r 71 -6.4 -4.21676 | opp_overlap 723977 723980 ATGACGATTTAAATG TATCTATAAA GAGGTG TTTATAGATA TTTTCACTGAATTCT TERM 807 724396 - 724367 - R 85 -9.3 -4.14004 | opp_overlap 724374, overlap 724369 724370 724374 TAATAGAAGCAGAAA TAGCAAAGGCAGC TAAA GCTGCCTTTGAGA ATTGACTCTTGTCCT TERM 808 724394 - 724369 - R 89 -11.9 -3.64959 | opp_overlap 724374, overlap 724367 724370 724374 ATAGAAGCAGAAATA GCAAAGGCAGC TAAA GCTGCCTTTGA GAATTGACTCTTGTC TERM 809 724393 - 724370 - R 95 -15.4 -2.77891 | opp_overlap 724374, overlap 724369 724367 724374 TAGAAGCAGAAATAG CAAAGGCAGC TAAA GCTGCCTTTG AGAATTGACTCTTGT TERM 810 724374 - 724389 + r 79 -10.4 -3.61268 | opp_overlap 724370 724369 724367 724374 AGCAGAAATAGCAAA GGCAGC TAAA GCTGCC TTTGAGAATTGACTC TERM 811 724389 - 724374 - R 86 -10.4 -4.05181 | opp_overlap 724374, overlap 724370 724369 724367 AGCAGAAATAGCAAA GGCAGC TAAA GCTGCC TTTGAGAATTGACTC Spea_0590 725533 - 724469 - | porin TERM 812 725547 - 725559 + H 82 -7.7 -4.5442 | ATTTTCATCTTCCTG TAGCG AAT CGCTA TTTTATAGTTGCAGG Spea_0591 725925 - 726725 + | UBA/THIF-type NAD/FAD binding protein TERM 813 726816 - 726832 + F 100 -9.4 -5.43414 | opp_overlap 726814 726812 726810 726816 CACACAAAATAGAGA GGCGCT AATTC AGCGCC TTTTTTGTGTCTAGT TERM 814 726832 - 726816 - f 77 -10.1 -3.32432 | opp_overlap 726816, overlap 726814 726812 726810 CACACAAAATAGAGA GGCGCTA ATT CAGCGCC TTTTTTGTGTCTAGT Spea_0592 726936 - 727553 + | hypothetical protein TERM 815 727627 - 727609 - T 100 -7.3 -5.60993 | opp_overlap 727610, overlap 727610 GTTTGGACAAAAAAA TGGGGGC TAATT GCCCCCT GCATTAGAAAGAACA TERM 816 727610 - 727626 + T 76 -10.8 -2.52464 | opp_overlap 727610 727609 TTTGGACAAAAAAAT GGGGGC TAATT GCCCCC TGCATTAGAAAGAAC TERM 817 727626 - 727610 - T 86 -10.8 -3.95873 | opp_overlap 727610, overlap 727609 TTTGGACAAAAAAAT GGGGGC TAATT GCCCCC TGCATTAGAAAGAAC Spea_0593 727784 - 727650 - | hypothetical protein TERM 818 728142 - 728158 + H 77 -9.5 -3.53444 | opp_overlap 728140 728154 GAATTGGTAGACACG TCGGATT CAA AATCCGA TTTCGAAAGAAGTGA TERM 819 728215 - 728230 + H 95 -6.1 -5.64274 | opp_overlap 728215 TTATCAACAAAGCAA CCTGC CATCGA GCAGG TTTTTTTATGCCTGA TERM 820 729461 - 729449 - g 76 -4.8 -4.79667 | opp_overlap 729449 AAAACGCATTAAAAA GGCA CCGAT TGCC TATAGTCAGTTTTTG Spea_0594 728937 - 730808 + | peptidase S9 prolyl oligopeptidase TERM 821 730873 - 730856 - T 93 -9.9 -4.84527 | opp_overlap 730856 TCTAGACAGTAAAAA GGGCATT AATT AATGCCC TTTTTTATTGCCGTA TERM 822 730856 - 730873 + T 100 -9.9 -5.46657 | opp_overlap 730856 TCTAGACAGTAAAAA GGGCATT AATT AATGCCC TTTTTTATTGCCGTA Spea_0595 732023 - 730899 - | peptidase M50 TERM 823 731569 - 731553 - G 78 -6.5 -4.5852 | GAACTGAAATGAAAA CAGCCAA GAG TAGGCTG CGACACTGGCTCCTG Spea_0596 733801 - 732137 - | hypothetical protein TERM 824 734281 - 734248 - R 85 -12.6 -3.10071 | opp_overlap 734248 734247 AAAGGGGAGGTAAGA GCTCTAAGGCATGA GCCATG TCATGCCTCAAAGC ATATTTTGCTGGGAC Spea_0597 735345 - 734320 - | rRNA (guanine-N(2)-)-methyltransferase TERM 825 734859 - 734871 + g 71 -7.7 -3.85165 | TATCAAGTTGGTAGC GACTG AGC CAGTC TTTGAGTTTCAACTC TERM 826 735539 - 735515 - R 100 -4.9 -5.72622 | opp_overlap 735521, overlap 735521 CTCATAAACAAAAAA CTATAACCACG AAG CGCGGTTTTTG TTAGCTACACCGAGA TERM 827 735521 - 735533 + r 76 -4.7 -5.10461 | opp_overlap 735515 735521 AACAAAAAACTATAA CCACG AAG CGCGG TTTTTGTTAGCTACA Spea_0598 736949 - 735612 - | alkaline phosphatase TERM 828 735937 - 735965 + g 93 -16.1 -3.11732 | opp_overlap 735941, overlap 735915 735930 735941 TCGTCTATGGCGATA GCAAGTTCTGCGA TAC TCGCAGGGCTTGC TTGAATACCTTTAAG TERM 829 735941 - 735961 + g 73 -9.7 -3.38088 | opp_overlap 735941, overlap 735937 735930 CTATGGCGATAGCAA GTTCTGCGA TAC TCGCAGGGC TTGCTTGAATACCTT TERM 830 736328 - 736308 - G 73 -11.1 -2.60813 | opp_overlap 736307, overlap 736307 736305 CACCTCGGCAAATAG GCCCAAGGC CTT GCCTTGGGT TAAACTATCGAGTTG TERM 831 736520 - 736507 - G 74 -3.7 -5.02074 | opp_overlap 736506 TTATGCGCTAAAAAA GCCGC TGGG GTGGC ATGATTAACTTGAGC TERM 832 736830 - 736842 + g 78 -6.3 -4.56775 | CATACCATCACCGAT CATGA TAA TCATG TTTTTAGGACGCGAT TERM 833 736924 - 736910 - G 87 -11.4 -3.9644 | opp_overlap 736912 GTGGTAACACAACAA GGGCAC TAA GTGCCC AAGTGCATGTTTTTC Spea_0599 737917 - 736964 - | glutathione synthetase TERM 834 737976 - 737959 - R 73 -8.3 -3.6217 | opp_overlap 737959 737960, overlap 737957 737960 TTTCAACGATAAATA TGGGGGC ATAA GCCCCCG TTTTCTAGCGTGCTA TERM 835 737959 - 737976 + r 90 -10.5 -4.40804 | opp_overlap 737959 737957 737960, overlap 737960 TTTCAACGATAAATA TGGGGGC ATAA GCCCCCG TTTTCTAGCGTGCTA TERM 836 737975 - 737960 - R 81 -11.8 -2.7682 | opp_overlap 737959 737960, overlap 737959 737957 TTCAACGATAAATAT GGGGGC ATAA GCCCCC GTTTTCTAGCGTGCT TERM 837 737960 - 737975 + r 83 -11.8 -3.24 | opp_overlap 737960 737959 737957, overlap 737959 TTCAACGATAAATAT GGGGGC ATAA GCCCCC GTTTTCTAGCGTGCT Spea_0600 738765 - 738034 - | hypothetical protein Spea_0601 739231 - 739983 + | deoxyribonuclease I TERM 838 740033 - 740059 + T 75 -9.5 -3.27525 | gap 1, overlap 740028 740034 TTAGTTTGGCTTTAG T-TTGCTGCCGC ATTT GCGGCAGCGATA TTGCGTTTCACCGCG TERM 839 740034 - 740057 + T 100 -14.6 -3.20349 | overlap 740033 740028 TAGTTTGGCTTTAGT TTGCTGCCGC ATTT GCGGCAGCGA TATTGCGTTTCACCG Spea_0602 740584 - 740018 - | protein of unknown function DUF335 SprT Spea_0603 742022 - 740862 - | hypothetical protein Spea_0604 743424 - 742513 - | LysR family transcriptional regulator TERM 840 744337 - 744352 + G 71 -7.6 -3.88787 | ATACCTCAGGCTGCA TCGATG GCAT CATCGA TTTCTCGCCATCTGA Spea_0605 743547 - 748100 + | carbamoyl-phosphate synthase L chain ATP-binding TERM 841 748170 - 748152 - T 83 -8.9 -4.09739 | opp_overlap 748152 TTAACCGGCTTAAAA TACCCAC CTCGT GTGGGTA TTTTTTTGTCTGGAA TERM 842 748152 - 748170 + T 100 -8.9 -5.71712 | opp_overlap 748152 TTAACCGGCTTAAAA TACCCAC CTCGT GTGGGTA TTTTTTTGTCTGGAA Spea_0606 749431 - 748187 - | sodium/hydrogen exchanger Spea_0607 750388 - 749576 - | hypothetical protein Spea_0608 751557 - 750412 - | UDP-galactopyranose mutase Spea_0609 752424 - 753128 + | sporulation domain-containing protein Spea_0610 753282 - 753911 + | hypothetical protein TERM 843 753959 - 753919 - f 79 -3.4 -5.5112 | gap 1, opp_overlap 753924 753927, overlap 753923 753924 753927 GCTATTAAGAAAAAA TAAACTTAGGTGGCTCAAC GTTT GTTTAGCCACCTTA-TTTG TTCTAAGGCTAATTT TERM 844 753956 - 753923 - f 89 -6.7 -5.20735 | opp_overlap 753924 753927, overlap 753919 753924 753927 TTAAGAAAAAATAAA CTTAGGTGGCTCAAC GTTT GTTTAGCCACCTTAT TTGTTCTAAGGCTAA TERM 845 753924 - 753955 + F 90 -10.2 -4.31433 | opp_overlap 753923 753919 753924 753927, overlap 753927 TAAGAAAAAATAAAC TTAGGTGGCTCAAC GTTT GTTTAGCCACCTTA TTTGTTCTAAGGCTA TERM 846 753955 - 753924 - f 80 -10.2 -3.70001 | opp_overlap 753924 753927, overlap 753923 753919 753927 TAAGAAAAAATAAAC TTAGGTGGCTCAAC GTTT GTTTAGCCACCTTA TTTGTTCTAAGGCTA TERM 847 753952 - 753927 - f 81 -11.9 -2.90326 | opp_overlap 753924 753927, overlap 753924 753923 753919 GAAAAAATAAACTTA GGTGGCTCAAC GTTT GTTTAGCCACC TTATTTGTTCTAAGG TERM 848 753927 - 753952 + F 95 -11.9 -4.27512 | opp_overlap 753927 753924 753923 753919, overlap 753924 GAAAAAATAAACTTA GGTGGCTCAAC GTTT GTTTAGCCACC TTATTTGTTCTAAGG Spea_0611 753974 - 754423 + | hypothetical protein Spea_0612 754521 - 755360 + | hypothetical protein TERM 849 755491 - 755516 + G 95 -11.1 -4.71828 | opp_overlap 755491 755490 GTGCTCTATAGCAAT GCAGGCTCCGC GAAT GTGCAGCCTGC TTTTATTGATCCAGT TERM 850 758469 - 758449 - g 72 -3.2 -5.02357 | opp_overlap 758449 GATAAGCAAACAAAA CGTTACGC ATTAA ACGTAGCG TTTCTGGCACGTAAA Spea_0613 755440 - 758571 + | hypothetical protein TERM 851 758938 - 758919 - g 74 -5.7 -4.68506 | overlap 758910 AACCAAGCTCAAAAA GCAGCTA AAACAA CAGCTGC ACCAGAATCGATTAC Spea_0614 758640 - 759488 + | sporulation domain-containing protein TERM 852 759549 - 759585 + T 70 -8.9 -3.23555 | gap 1, opp_overlap 759549 759542, overlap 759547 759545 AAGCTAAAGAGCACA GGCTAATGAACATAGC GTTTAA GCGA-GTTCATTAGCC TCTATCTTATTTGCA Spea_0615 759941 - 759612 - | hypothetical protein Spea_0616 761036 - 760002 - | AraC family transcriptional regulator Spea_0617 761205 - 762566 + | hypothetical protein TERM 853 762594 - 762607 + F 100 -5.9 -6.06723 | opp_overlap 762594 AGGACGGCCAAAAAA CTGCC ATCA GGCGG TTTTTTTTTGCACAA TERM 854 762607 - 762594 - f 74 -3.7 -5.03715 | opp_overlap 762594 AGGACGGCCAAAAAA CTGCC ATCA GGCGG TTTTTTTTTGCACAA TERM 855 763369 - 763351 - g 74 -6 -4.66609 | GAGGCTAGGGAAAAA CATCAAGC TTT GTTTGATG AGCTCAATATCGATC Spea_0618 762721 - 763605 + | hypothetical protein Spea_0619 763856 - 763617 - | hypothetical protein TERM 856 763820 - 763837 + g 100 -11.3 -5.86332 | opp_overlap 763820 GAACAAAATAAAAAA CCACCTC AAAT GAGGTGG TTTTTTTTAGCTTAA TERM 857 763837 - 763820 - G 100 -11.3 -5.92399 | opp_overlap 763820 GAACAAAATAAAAAA CCACCTC AAAT GAGGTGG TTTTTTTTAGCTTAA Spea_0620 764296 - 763871 - | nitrate reductase cytochrome c-type subunit (NapB) Spea_0621 765189 - 764293 - | quinol dehydrogenase membrane component TERM 858 764572 - 764556 - G 70 -9.4 -3.4268 | overlap 764554 CGAGAAGGCCAAATA GTGCCC CCGTT GGGCAC AGGTGTCCGCACCAA TERM 859 764879 - 764863 - G 70 -5.1 -4.431 | overlap 764865 GACCCAGCTACAAAA TACTCGG CCG CCAAGCA CTGCATACAGCAGTG Spea_0622 765920 - 765186 - | quinol dehydrogenase periplasmic component Spea_0623 768461 - 765981 - | nitrate reductase TERM 860 766114 - 766098 - G 71 -7.9 -3.95051 | opp_overlap 766097 766104, overlap 766089 GAAGAATGGCATAAA CGCCACG CCT CTTGGCG GCTTGTTACGGCCTT Spea_0624 768726 - 768451 - | NapD family protein Spea_0625 770192 - 769086 - | hypothetical protein TERM 861 769581 - 769558 - G 70 -5.2 -4.38712 | opp_overlap 769579, overlap 769575 CTGACCTTGATAAAA GGCTGGCTAT AATA ATAGCTCGCC ACTGTGCCGGCGGCA TERM 862 769586 - 769596 + g 85 -6.8 -5.07567 | opp_overlap 769575, overlap 769579 AATAGCTCGCCACTG TGCC GGC GGCA TTTTTTCGGCTATAG Spea_0626 772726 - 770189 - | hypothetical protein TERM 863 771778 - 771815 + g 82 -13.4 -3.05343 | opp_overlap 771778 TCAGCAGTTCAAAAA GCAGGGCGAGTAGCAA GGCTCG TTGCGGCACGCCCTGC TGTTGCAGCTGTACC TERM 864 771815 - 771778 - G 95 -11.2 -4.63527 | opp_overlap 771778 TCAGCAGTTCAAAAA GCAGGGCGAGTAGCAA GGCTCG TTGCGGCACGCCCTGC TGTTGCAGCTGTACC Spea_0627 773387 - 772719 - | ABC transporter related TERM 865 773612 - 773622 + H 100 -6.8 -5.71983 | opp_overlap 773612 773611, overlap 773610 CTTTAATTGGTAAAG CCTG TGG CAGG TTTTTTTATGCTTGA TERM 866 775662 - 775644 - g 71 -7.4 -3.86202 | opp_overlap 775648 775657, overlap 775649 GCCCAGCAGATCAAA GATAGCGA GAG TCGCTTTC GAGGCTTAGTGGCTA TERM 867 777489 - 777503 + G 79 -2.8 -5.35815 | GTTGAAAGTCAGTTT GGTAAT GGC AGTACC TTTTTCTTTAGTGTG TERM 868 777963 - 777932 - g 80 -7.1 -4.56597 | CTCGCTTGGGAAAAA CGGCACCATGGCG GTTAGG CGTCAGGGAGCCG ATATCAGCCAAGAGC Spea_0628 773739 - 779036 + | multi-sensor hybrid histidine kinase Spea_0629 779176 - 780195 + | response regulator receiver modulated metal dependent phosphohydrolase TERM 869 780290 - 780241 - T 95 -13.2 -3.60627 | gap 1, opp_overlap 780252 780258, overlap 780244 780252 780258 TTATTTGAGCTGAAA CTAGCTGAAAACA-AAAAGGCGC GGTAA GCGCCTTTTCTGTTTTAAGCCAA AGCAGCAACAGGTTT TERM 870 780287 - 780244 - T 100 -14.9 -2.92613 | gap 1, opp_overlap 780252 780258, overlap 780241 780252 780258 TTTGAGCTGAAACTA GCTGAAAACA-AAAAGGCGC GGTAA GCGCCTTTTCTGTTTTAAGC CAAAGCAGCAACAGG TERM 871 780279 - 780252 - T 85 -9.3 -4.18094 | gap 1, opp_overlap 780252 780258, overlap 780244 780241 780258 GAAACTAGCTGAAAA CA-AAAAGGCGC GGTAA GCGCCTTTTCTG TTTTAAGCCAAAGCA TERM 872 780252 - 780279 + T 83 -9.3 -4.07568 | gap 1, opp_overlap 780252 780244 780241 780258, overlap 780258 GAAACTAGCTGAAAA CA-AAAAGGCGC GGTAA GCGCCTTTTCTG TTTTAAGCCAAAGCA TERM 873 780258 - 780272 + T 90 -8.5 -4.89567 | opp_overlap 780258 780252 780244 780241, overlap 780252 AGCTGAAAACAAAAA GGCGC GGTAA GCGCC TTTTCTGTTTTAAGC TERM 874 780272 - 780258 - T 95 -8.5 -5.46706 | opp_overlap 780252 780258, overlap 780252 780244 780241 AGCTGAAAACAAAAA GGCGC GGTAA GCGCC TTTTCTGTTTTAAGC Spea_0630 781275 - 780304 - | glycine cleavage T protein (aminomethyl transferase) TERM 875 781231 - 781218 - G 70 -2.3 -5.06103 | opp_overlap 781219, overlap 781219 ATAATTGTGAAAAAA GCAGC TCAG GCTGT TGTCCATTAAGAGGC TERM 876 781696 - 781664 - R 95 -8.7 -5.48787 | gap 1, opp_overlap 781665 781668 781689, overlap 781668 781689 ATAAGAGATAAAAAA TAAAGGCCGTATAA AGTGAA TTATACGGCC-TTA TTTTATGGCTGATTA TERM 877 781665 - 781696 + r 90 -10.3 -4.44915 | opp_overlap 781664 781668 781689, overlap 781668 781689 TAAGAGATAAAAAAT AAAGGCCGTATAA AGTGAA TTATACGGCCTTA TTTTATGGCTGATTA TERM 878 781693 - 781668 - R 100 -12 -5.16969 | opp_overlap 781665 781668 781689, overlap 781664 781689 GAGATAAAAAATAAA GGCCGTATAA AGTGAA TTATACGGCC TTATTTTATGGCTGA TERM 879 781668 - 781693 + r 95 -12 -4.33182 | opp_overlap 781668 781664 781689, overlap 781665 781689 GAGATAAAAAATAAA GGCCGTATAA AGTGAA TTATACGGCC TTATTTTATGGCTGA Spea_0631 782965 - 781736 - | D-3-phosphoglycerate dehydrogenase TERM 880 782665 - 782677 + g 89 -9.1 -4.57569 | opp_overlap 782665 ATGGTGCGTTGAATA CTGGG ATC CCCAG TTTTTCAGCCGCTGC Spea_0632 783222 - 783836 + | hypothetical protein Spea_0633 784084 - 784758 + | LuxR family transcriptional regulator TERM 881 784793 - 784809 + F 76 -2.2 -5.38047 | opp_overlap 784793 ATTCACCACTTTAAA GCAATG TTGGC CATAGC TTTTTTGTATAGCTA Spea_0634 785435 - 786661 + | Na+ dependent nucleoside transporter TERM 882 786703 - 786736 + F 70 -9.7 -2.60211 | opp_overlap 786704, overlap 786691 786702 786701 GTAGTATTTTTTATA AGAGTACTTGTTTAC TAGC GCAAACAAGTACTCA ACTTTTTAAGGAAGT TERM 883 786735 - 786704 - f 100 -15.4 -3.30441 | opp_overlap 786691 786703 786702 786701 TAGTATTTTTTATAA GAGTACTTGTTTAC TAGC GCAAACAAGTACTC AACTTTTTAAGGAAG Spea_0635 786755 - 787465 + | purine nucleoside phosphorylase Spea_0636 787836 - 788273 + | thioesterase superfamily protein TERM 884 788294 - 788317 + F 93 -11.2 -4.33274 | opp_overlap 788294 AGCGTTAGAGTTAAA CAGTTAAACA TTAG TGTTTAACTG TTTTGATAGTGTGCA TERM 885 788317 - 788294 - f 88 -11.2 -3.7108 | opp_overlap 788294 AGCGTTAGAGTTAAA CAGTTAAACA TTAG TGTTTAACTG TTTTGATAGTGTGCA Spea_0637 788554 - 788808 + | hypothetical protein TERM 886 788822 - 788843 + F 82 -8.1 -4.63542 | gap 1, opp_overlap 788825 AAAGCTTGTTGCTAA GGAGG-AATC TTC GATTACCTCC TTTTTGGCCGTTCTA Spea_0638 789273 - 790736 + | catalase TERM 887 790797 - 790772 - T 100 -12.7 -4.17789 | opp_overlap 790772, overlap 790779 TAAGCATAAATGAAA GGCAAAACAGC TAAT ACTGTTTTGCC TTTTTTGTGCACTAT TERM 888 790772 - 790797 + T 100 -12 -5.26918 | opp_overlap 790772 790779 TAAGCATAAATGAAA GGCAAAACAG CTAATA CTGTTTTGCC TTTTTTGTGCACTAT Spea_0640 791557 - 791003 - | hypothetical protein TERM 889 791796 - 791806 + H 79 -3.2 -5.41143 | GGATGCGCATTATAG CGAC TGC GTTG TTTTTTTCAACGCTA Spea_0641 792238 - 793437 + | aromatic amino acid permease TERM 890 793548 - 793580 + F 100 -13 -5.93252 | gap 1, opp_overlap 793548 GTCTCATGTGATAAA GTCGAGCACTAATAT GAAA ATATTAG-GCTCGAC TTTTTTATTTTTGGG TERM 891 793580 - 793548 - f 100 -13 -3.89346 | gap 1, opp_overlap 793548 GTCTCATGTGATAAA GTCGAGCACTAATAT GAAA ATATTAG-GCTCGAC TTTTTTATTTTTGGG TERM 892 793691 - 793673 - f 90 -4 -5.87996 | CAATCAACAAAAAAA TTAAAAAT AAT ACTTTTAA TAAATAAAGAAATGG Spea_0642 793716 - 795872 + | hypothetical protein TERM 893 795936 - 795913 - f 90 -11.1 -4.18018 | opp_overlap 795913 CTTTTGGATGCAAAA GCCGAAACA TGAAAG TGTTTCGGC TTTTTTGATCTTTGG TERM 894 795913 - 795936 + F 100 -11.8 -5.32699 | opp_overlap 795913 CTTTTGGATGCAAAA GCCGAAACAT GAAA GTGTTTCGGC TTTTTTGATCTTTGG TERM 895 796029 - 796013 - f 73 -9.5 -3.25802 | opp_overlap 796012 796011 GACCAAAGTCATTAA GTTAGAC TGC GTCTAAC AATTAATTCAATCAA TERM 896 796083 - 796062 - f 70 -8.1 -3.78934 | gap 1 TTCGTTTGATAATAA GTCGTGAGCT TCC AGCTCAC-AC ACGGGCAAGAAGGGG TERM 897 796248 - 796221 - f 82 -10.6 -3.53012 | TCCTGCCCCGCGAAA GTTACGCCGACA TCCC TGTCGGCATCAC GCGATTTATTCCAAC Spea_0643 796579 - 797094 + | hypothetical protein TERM 898 797132 - 797102 - f 71 -7.6 -3.81414 | gap 1, opp_overlap 797107 797112 ATGCCTAACGAATAA GGAT-AGGCCGCG CGCAGT CGCGTCCTTATCC TGAGTGTTGAACAAG Spea_0644 797245 - 797997 + | hypothetical protein TERM 899 798299 - 798326 + T 70 -5.6 -4.3739 | overlap 798300 798322 CCTAATCAAAATCTC ACGAGCTAGA TCCAAATC TCTAGCTCGC TTTTGTCCAAAAGTG TERM 900 798300 - 798325 + T 70 -9.1 -3.22113 | overlap 798299 798322 CTAATCAAAATCTCA CGAGCTAGA TCCAAATC TCTAGCTCG CTTTTGTCCAAAAGT TERM 901 798322 - 798343 + T 70 -8.1 -3.6512 | overlap 798300 798299 GATCCAAATCTCTAG CTCGCTTTT GTCC AAAAGTGAG TTTAAAGCTTCTTTA TERM 902 798637 - 798651 + T 77 -10 -3.28866 | overlap 798634 AGCTCACGACCCTAG TCAGGC GCA GCCTGA TATCTTTAGCTATGC Spea_0645 799662 - 798736 - | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TERM 903 800914 - 800892 - g 70 -9.9 -3.01712 | overlap 800894 800896 TTGTGGCGGTTAATA CAGACGCTT CGGTT AAGCGCCTG AAAGGTGAAGGTCGC Spea_0646 799745 - 801193 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 904 801202 - 801175 - f 77 -7.9 -4.21194 | gap 1, opp_overlap 801175 801180 GGCCATTATCCAAAA CATC-ATGGCTA ACCAG TAGCCATTGATG ATTAGTCGCTAGTGA TERM 905 801473 - 801501 + G 73 -11.1 -2.53273 | overlap 801472 801470 801464 ACTTGGTCAGCGCGG CGCTATGGTGT TGCCTTT ACACCATGGCG ATATTGCTGGTTTGG Spea_0647 801234 - 802154 + | hypothetical protein Spea_0648 802320 - 802793 + | TetR family transcriptional regulator TERM 906 802940 - 802967 + T 90 -10 -4.35742 | opp_overlap 802940 AGAGTCGTTAAAAAA GCCTGTTATCTA ACGC TAAATAACAGGC TTTTACTGCTTGGCT TERM 907 802967 - 802940 - T 100 -12.2 -5.02476 | opp_overlap 802940 AGAGTCGTTAAAAAA GCCTGTTATCTA ACGC TAAATAACAGGC TTTTACTGCTTGGCT Spea_0649 804415 - 803015 - | MltA-interacting MipA family protein TERM 908 804833 - 804808 - R 100 -11.9 -5.06414 | opp_overlap 804808 804813, overlap 804813 TTGGGGGAAGAAAAA CAAAAGGCCGC ATTC GCGGCCTTTTC TGTTTTTAGTATTTA TERM 909 804808 - 804833 + r 91 -11.9 -4.07993 | opp_overlap 804808 804813, overlap 804813 TTGGGGGAAGAAAAA CAAAAGGCCGC ATTC GCGGCCTTTTC TGTTTTTAGTATTTA TERM 910 804828 - 804813 - R 100 -11.8 -5.42605 | opp_overlap 804808 804813, overlap 804808 GGAAGAAAAACAAAA GGCCGC ATTC GCGGCC TTTTCTGTTTTTAGT TERM 911 804813 - 804828 + r 100 -11.8 -5.00027 | opp_overlap 804813 804808, overlap 804808 GGAAGAAAAACAAAA GGCCGC ATTC GCGGCC TTTTCTGTTTTTAGT Spea_0650 806241 - 804859 - | NAD(P)(+) transhydrogenase (AB-specific) Spea_0651 806523 - 806248 - | oxidoreductase Spea_0652 807752 - 806523 - | NAD(P) transhydrogenase subunit alpha TERM 912 809166 - 809176 + G 71 -6.8 -4.18934 | ACCCGGCTAAGGTGG CTGC AGA GCAG TTTATTGAGCTACTG Spea_0653 808052 - 809848 + | sulfite reductase (NADPH) flavoprotein, alpha chain Spea_0654 809939 - 811636 + | sulfite reductase subunit beta Spea_0655 811629 - 812384 + | phosphoadenosine phosphosulfate reductase TERM 913 812403 - 812461 + F 72 -9.1 -3.31905 | gap 1, opp_overlap 812408, overlap 812405 812407 TTGCTGGTGTGGTGA TT-CAATTCTTGGGCTGTTAAGTGGAAC AAAC GTACCACTTAATAGCCCGAAAGCTGTAA TATTGTATGCAAAAT TERM 914 812405 - 812458 + F 90 -13.3 -2.83249 | opp_overlap 812408, overlap 812403 812407 GCTGGTGTGGTGATT CAATTCTTGGGCTGTTAAGTGGAAC AAAC GTACCACTTAATAGCCCGAAAGCTG TAATATTGTATGCAA TERM 915 812407 - 812456 + F 75 -10.1 -2.96183 | opp_overlap 812408, overlap 812405 812403 TGGTGTGGTGATTCA ATTCTTGGGCTGTTAAGTGGAAC AAAC GTACCACTTAATAGCCCGAAAGC TGTAATATTGTATGC TERM 916 812814 - 812848 + F 100 -19.4 -4.4874 | opp_overlap 812824, overlap 812808 ATCAAGCGAGTTGTC CCCCAGGTAACCCAGC TAT GTTGGCTTACCTGGGG TTTTAAGTTTTTAAG Spea_0656 813065 - 814789 + | hypothetical protein TERM 917 814857 - 814836 - f 81 -7.2 -4.58663 | opp_overlap 814836, overlap 814838 ATCACCTTGCAAAAA CGCCAGCC ATTGAG GGCTGGTG TTTTTATTTTATCAA TERM 918 814836 - 814857 + F 100 -9.4 -5.54907 | opp_overlap 814836 814838 ATCACCTTGCAAAAA CGCCAGCC ATTGAG GGCTGGTG TTTTTATTTTATCAA Spea_0657 814903 - 815328 + | hypothetical protein Spea_0658 815563 - 816114 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 919 816123 - 816154 + T 71 -6.6 -4.10179 | opp_overlap 816123 816125, overlap 816128 AGAGTAAACAGCAAA TATGGCCAGCCTTT GAAT GAAGGCTGGTTACA TTTCTATCGGTTGTG TERM 920 816128 - 816149 + T 80 -10.9 -3.35695 | opp_overlap 816125 816123, overlap 816123 AAACAGCAAATATGG CCAGCCTTT GAAT GAAGGCTGG TTACATTTCTATCGG TERM 921 816850 - 816864 + T 71 -7.2 -3.84451 | opp_overlap 816855, overlap 816842 816855 TTGGGGGCTTTGTTA TCAAAC GAA GTTTGA TTTCGCTTTAAGGGC TERM 922 816941 - 816961 + T 70 -5.5 -4.45168 | overlap 816944 GGAAGCTCACGACCT TTATCAAAC GAA GTTTGATTA TTTCTCTTTTAGAGA TERM 923 816944 - 816958 + T 78 -7.2 -4.32763 | overlap 816941 AGCTCACGACCTTTA TCAAAC GAA GTTTGA TTATTTCTCTTTTAG TERM 924 817153 - 817114 - T 100 -24 -3.24381 | opp_overlap 817117 817121, overlap 817117 817121 ACAACACCAAGGCAA TAATAAAGCCCTGCAATG GTGA CATTGCAGGGCTTTATTA AATAAAAATCAGTCG TERM 925 817150 - 817117 - T 100 -21.3 -3.74928 | opp_overlap 817117 817121, overlap 817114 817121 ACACCAAGGCAATAA TAAAGCCCTGCAATG GTGA CATTGCAGGGCTTTA TTAAATAAAAATCAG TERM 926 817117 - 817150 + T 100 -21.3 -3.06183 | opp_overlap 817117 817114 817121, overlap 817121 ACACCAAGGCAATAA TAAAGCCCTGCAATG GTGA CATTGCAGGGCTTTA TTAAATAAAAATCAG TERM 927 817146 - 817121 - T 100 -17.7 -4.4846 | opp_overlap 817117 817121, overlap 817117 817114 CAAGGCAATAATAAA GCCCTGCAATG GTGA CATTGCAGGGC TTTATTAAATAAAAA TERM 928 817121 - 817146 + T 100 -17.7 -4.20516 | opp_overlap 817121 817117 817114, overlap 817117 CAAGGCAATAATAAA GCCCTGCAATG GTGA CATTGCAGGGC TTTATTAAATAAAAA Spea_0659 818055 - 817195 - | protein of unknown function RIO1 Spea_0660 819670 - 818174 - | hypothetical protein TERM 929 818766 - 818806 + g 77 -10.6 -3.42459 | gap 1, opp_overlap 818750 818775, overlap 818770 CCATCACCATCGTTA CCGACAGCATGGCTAAAGT GTTT ACTT-AGCCATGCTGTGAG TTGCTGTTGTGGCTG TERM 930 818770 - 818802 + g 86 -14.4 -2.61226 | gap 1, opp_overlap 818750 818775, overlap 818766 CACCATCGTTACCGA CAGCATGGCTAAAGT GTTT ACTT-AGCCATGCTG TGAGTTGCTGTTGTG Spea_0661 820717 - 819752 - | phospholipase A(1) Spea_0662 821127 - 821942 + | uroporphyrin-III C-methyltransferase Spea_0663 821969 - 822877 + | sulfate adenylyltransferase subunit 2 Spea_0664 822927 - 824366 + | sulfate adenylyltransferase subunit 1 TERM 931 824442 - 824452 + G 73 -2.4 -5.26316 | CGGGGCTATGGACAC CTGC TGC GCTG TTTTTTATCGCATCG TERM 932 824482 - 824533 + G 71 -9.8 -3.25802 | overlap 824484 824498 GTTAACCACTTACCT GCTTGGCA-TGGTGGAGCTTGAAA CTGCGC TTTCAAGTTTTACCAATGCC-AGC TTAGTCACTTTAGTG Spea_0665 824369 - 826093 + | TrkA domain-containing protein Spea_0666 826183 - 826800 + | adenylyl-sulfate kinase Spea_0667 826858 - 827301 + | GCN5-related N-acetyltransferase TERM 933 827349 - 827381 + T 88 -7.8 -5.03994 | opp_overlap 827346 827349 GACGGATAGTAATTA TGCGATGCCTTT ATGTAATCC ATAGGCATCGCA TTTTTATATCTAAGA Spea_0668 828267 - 827407 - | hypothetical protein TERM 934 828285 - 828303 + r 89 -11.8 -3.49668 | opp_overlap 828288, overlap 828288 TCTGTTATTCACCAT CAACAAGC GGT GCTTGTTG TTATCTGGCCGGTTT TERM 935 828288 - 828300 + r 73 -7.7 -3.88232 | opp_overlap 828288, overlap 828285 GTTATTCACCATCAA CAAGC GGT GCTTG TTGTTATCTGGCCGG Spea_0669 829530 - 828340 - | major facilitator transporter TERM 936 830822 - 830810 - g 70 -9.1 -3.30605 | AGACTAACAAGCTAA GTGCC GAC GGCAC GGTTGAGATCTTATC Spea_0670 829855 - 831264 + | hypothetical protein TERM 937 832156 - 832166 + G 72 -5.4 -4.41348 | CGACAATATCGTAGG CGTT CGC AACG TTTATTTGGGCGAGC Spea_0671 831293 - 832444 + | putative lipoprotein TERM 938 832460 - 832477 + F 100 -12.7 -5.30616 | AGCATGAGTGTATGA GGAGGCC TTAA GGCCTCC TTTTTATTTGGATAA TERM 939 834022 - 834008 - g 79 -10 -3.65902 | opp_overlap 834004 834008 CTTAGCCGATGGAAA CGAGTG GCG CACTCG TCCCTTATGGGGAAT Spea_0672 832557 - 834212 + | hypothetical protein TERM 940 834255 - 834287 + F 76 -9.2 -3.75517 | gap 1, opp_overlap 834255, overlap 834251 834259 834267 CAGTAAACGCAAAAA CAGCGGGGCTACCTC TTTT GAGG-AGTTTCGCTG TTGATTTTGTGAGGT Spea_0673 834432 - 834965 + | protoporphyrinogen oxidase Spea_0674 834980 - 835510 + | hypothetical protein TERM 941 835584 - 835610 + T 93 -13.2 -3.27029 | opp_overlap 835587, overlap 835587 TGAGTAAGGTTAATC TAATGGCTCAAA AGT TTTGAGCCATTG TCTTGCTTCATGCCC TERM 942 835587 - 835607 + T 90 -12.7 -3.77119 | opp_overlap 835587, overlap 835584 GTAAGGTTAATCTAA TGGCTCAAA AGT TTTGAGCCA TTGTCTTGCTTCATG TERM 943 835607 - 835587 - T 85 -12.7 -3.19246 | opp_overlap 835584 835587 GTAAGGTTAATCTAA TGGCTCAAA AGT TTTGAGCCA TTGTCTTGCTTCATG Spea_0675 836511 - 835795 - | pseudouridine synthase Spea_0676 837237 - 836524 - | hypothetical protein TERM 944 837308 - 837287 - R 100 -11.7 -5.42259 | opp_overlap 837287 TTAGCCCCAAAAAAA GGAGTACAT ATTC ATGTACTCC TTGATTATAGAATGC TERM 945 837287 - 837308 + r 89 -11.7 -3.45118 | opp_overlap 837287 TTAGCCCCAAAAAAA GGAGTACAT ATTC ATGTACTCC TTGATTATAGAATGC Spea_0677 838807 - 837389 - | Na+/H+ antiporter NhaC TERM 946 838575 - 838552 - G 72 -3.2 -4.98616 | TCAAAATAGCAAAAA TAATAGCG GGTAGAAT CGCTACTA CACTCGGTAACTGGT Spea_0678 839151 - 839675 + | hypothetical protein Spea_0679 839735 - 841789 + | TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase TERM 947 841806 - 841824 + F 76 -3.1 -5.26875 | overlap 841801 841799 CCTAACCCGCCTAAC GCTTAGT CTTGT GCTAGGC TTTTTTGCTTCCCCC Spea_0680 842022 - 843188 + | porin TERM 948 843233 - 843255 + T 100 -11.3 -5.42131 | opp_overlap 843233 GACGGTTTTTATTAA GCCAGTTGG AACTC CCGACTGGC TTTTTTATGTACTTC TERM 949 843255 - 843233 - T 73 -9.8 -3.14344 | opp_overlap 843233 GACGGTTTTTATTAA GCCAGTTGGA ACT CCCGACTGGC TTTTTTATGTACTTC Spea_0681 843957 - 843229 - | integrase catalytic region TERM 950 844074 - 844107 + r 80 -2.4 -5.64274 | overlap 844075 ACTTTATGGTGCCTT TTACTTTGGCGAAC CAGAGC GTTCGGCTAAGTAC TTTTTTTCTAAATCG Spea_0682 844457 - 844074 - | transposase TERM 951 844504 - 844545 + r 71 -9.5 -2.83903 | opp_overlap 844515, overlap 844515 GGACGGGACAGTTCA CCAATTTAAAAGGCCTACC GTGA GGTAAGCCTTTTTGTTTGG TCGATTTTTAGCGAC TERM 952 844515 - 844534 + r 91 -7.8 -5.33405 | opp_overlap 844515, overlap 844504 TTCACCAATTTAAAA GGCCTACC GTGA GGTAAGCC TTTTTGTTTGGTCGA TERM 953 844534 - 844515 - R 89 -10 -4.30014 | opp_overlap 844515 844504 TTCACCAATTTAAAA GGCCTACC GTGA GGTAAGCC TTTTTGTTTGGTCGA Spea_0683 845309 - 844599 - | hypothetical protein TERM 954 844659 - 844678 + g 70 -2.1 -4.93968 | overlap 844672 844674 CTTGCCTTGTTGATA GCTTGGA GCCGCA TCGAAGC TTTTTGCTTCTGAAT Spea_0684 846097 - 845453 - | cob(II)yrinic acid a,c-diamide reductase TERM 955 845851 - 845867 + g 75 -10.1 -3.54459 | opp_overlap 845843 CTGTAAACTGTGCAC GGCCAGC TGC GTTGGCC TTTACAAAAGATTGG TERM 956 846147 - 846130 - R 90 -9.8 -4.46267 | opp_overlap 846143 ATAAGCTAATGAAAA GGCGCC ACGATG GGCGCC TAGAGCTTAACTGCA Spea_0685 847512 - 846196 - | anaerobic C4-dicarboxylate transporter TERM 957 846900 - 846918 + g 71 -7.4 -3.89903 | overlap 846903 CTTCATCTTGCATGC GAGCCTGA AAT TCAGGGTC TTTATCGAGATCTTT TERM 958 848796 - 848781 - g 78 -11.8 -3.00525 | overlap 848776 GGGGGTTAAACCAGA GGCGGC AATT GCCGCC TTAACCCAGTTTGCA Spea_0686 847864 - 849249 + | UDP-N-acetylmuramate TERM 959 849756 - 849771 + G 75 -6.1 -4.4891 | opp_overlap 849752 AGGCGCAACCATCAT GCCTG CGGCAC CAGGC TTTTATCATAATCCC Spea_0687 849256 - 849909 + | aromatic acid decarboxylase TERM 960 850268 - 850286 + G 71 -7.4 -3.92602 | opp_overlap 850270 ATGCTATTGCTACGA GAGCCAAA GAG TTTGGCGC TTTGTACGCTATTAG Spea_0688 849917 - 850450 + | hypoxanthine phosphoribosyltransferase TERM 961 850551 - 850518 - f 70 -8.9 -3.19192 | opp_overlap 850526, overlap 850523 850526 TGGCACCTAACCTAA TACAATGACTCCCGC AATC GCGGGAGTTTTTATA TATTTTCAAATGGAT TERM 962 850526 - 850543 + F 100 -12.7 -5.186 | opp_overlap 850523 850518 850526 AACCTAATACAATGA CTCCCGC AATC GCGGGAG TTTTTATATATTTTC TERM 963 850543 - 850526 - f 84 -12.7 -2.95409 | opp_overlap 850526, overlap 850523 850518 AACCTAATACAATGA CTCCCGC AATC GCGGGAG TTTTTATATATTTTC TERM 964 850983 - 850972 - g 71 -7.2 -4.08394 | AGATTTGTGGGAAAA GCGC AATA GCGC CGCTCGCGAGCTATC Spea_0689 850577 - 851521 + | ABC transporter related Spea_0690 851518 - 852294 + | ABC-2 type transporter TERM 965 852327 - 852347 + T 100 -15.5 -5.40004 | opp_overlap 852327 TCTAGACCGAAAAAA GCCAGCAGT TTA ACTGCTGGC TTTTTTGCTTTAATG TERM 966 852347 - 852327 - T 100 -15.5 -5.1287 | opp_overlap 852327 TCTAGACCGAAAAAA GCCAGCAGT TTA ACTGCTGGC TTTTTTGCTTTAATG Spea_0691 852701 - 852366 - | hypothetical protein Spea_0692 853292 - 852786 - | hypothetical protein TERM 967 853585 - 853561 - R 100 -10.1 -5.46657 | opp_overlap 853561 853578 CAGGGCAATAAAAAA CGGCTCAAAAC TGT ATTTTGAACCG TTCAATTCTTGCAGG Spea_0693 854493 - 853642 - | pantoate--beta-alanine ligase TERM 968 854553 - 854526 - R 88 -10.6 -4.01381 | opp_overlap 854525 ACTCAATTTAAACAA TGGCTCTCAACC CATA GGCTGAGAGCGA ATGATTAGAAATTAA Spea_0694 855359 - 854565 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 969 855508 - 855473 - R 89 -9.2 -4.7219 | gap 1 TATACTAACAGAAAA TCGCAACGGCTGAAT GTCACTT ATTCAGCCGTCG-GA GCTTGAGCTAACACA Spea_0695 855987 - 855493 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 970 855896 - 855941 + g 75 -11.3 -3.06915 | gap 1, opp_overlap 855913, overlap 855899 855913 CTGAAGGAATCTGCA TGCGCCAAGCTCAACAATGCCT CAC AGGCATTATTGAGCT-GGCTAA TTGGGTCCGCTAAGT TERM 971 855899 - 855938 + g 100 -17.4 -2.75382 | gap 1, opp_overlap 855913, overlap 855896 855913 AAGGAATCTGCATGC GCCAAGCTCAACAATGCCT CAC AGGCATTATTGAGCT-GGC TAATTGGGTCCGCTA Spea_0696 857291 - 855987 - | poly(A) polymerase Spea_0697 858349 - 857471 - | glutamyl-tRNA synthetase class Ic TERM 972 858273 - 858261 - G 100 -9.1 -5.08824 | overlap 858263 CGGGCACGCAAAAAA CTGCC GAG GGCAG CAATCAATGAACCAA TERM 973 858394 - 858372 - R 95 -11.2 -5.08255 | overlap 858374 AGTCGTAAAACAAAA GAGCGGAGCC ATA AGCTCCGCAC CTTAAGATGGCATTT TERM 974 858392 - 858374 - R 100 -12.4 -4.16397 | overlap 858372 TCGTAAAACAAAAGA GCGGAGCC ATA AGCTCCGC ACCTTAAGATGGCAT Spea_0698 858851 - 858408 - | TraR/DksA family transcriptional regulator Spea_0699 859714 - 859010 - | sugar fermentation stimulation protein TERM 975 861144 - 861168 + G 73 -11.4 -2.58544 | gap 1, overlap 861143 ACCAGTGATCATCGA TGCGGCGACCC TAAC GGG-CGCCGCG GTTATGGCGGTAGGC Spea_0700 860251 - 861528 + | aminopeptidase B TERM 976 861637 - 861654 + F 100 -12.7 -5.06816 | opp_overlap 861637 861634 CAGTCTTAGTAATGA GCCTCGC AATA GCGAGGC TTTTTATTGGCACAT TERM 977 861654 - 861637 - f 83 -12.7 -2.78216 | opp_overlap 861637, overlap 861634 CAGTCTTAGTAATGA GCCTCGC AATA GCGAGGC TTTTTATTGGCACAT Spea_0701 861751 - 862677 + | transcriptional regulator, CadC TERM 978 862891 - 862910 + T 87 -4.9 -5.49729 | overlap 862892 ATCAGTTCTTCGATT AGCCACC AAGAGA GGTGGCC TTTTTTTAGCTGCTT TERM 979 862892 - 862909 + T 77 -8.4 -3.8821 | overlap 862891 TCAGTTCTTCGATTA GCCACC AAGAGA GGTGGC CTTTTTTTAGCTGCT Spea_0702 863249 - 862938 - | hypothetical protein Spea_0703 864098 - 863577 - | 2'-5' RNA ligase TERM 980 864367 - 864377 + G 82 -6.8 -4.89477 | opp_overlap 864363 864366 CACTGCTACAACCAC TGCG TGA CGCA TTTTCTTGTTGCCAG TERM 981 865274 - 865325 + G 75 -6.6 -4.46926 | gap 3, overlap 865284 GCTGAAGCGAATCAG TCAGG-CATCG-GCGGCGCAGCGCG CGGGT CGTGCGG-GCCGCTTGATGGCCGGA TTTTGTACTCGGCTG TERM 982 866524 - 866510 - g 89 -11.4 -4.16842 | opp_overlap 866508 GTTACTTCCAAGAAA GTGGCC GAT GGCCAC AGGTTCTAGCGTTAA Spea_0704 864225 - 866834 + | ATP-dependent helicase HrpB TERM 983 866985 - 866961 - g 79 -7.8 -4.42806 | overlap 866962 CCAGCGCCAAAGAAA GCCCCGAAGA AAGCG CCTTCGGGGT GGGGTAAGAAGATCT TERM 984 866984 - 866962 - g 77 -11.3 -3.25202 | overlap 866961 CAGCGCCAAAGAAAG CCCCGAAGA AAGCG CCTTCGGGG TGGGGTAAGAAGATC Spea_0705 866859 - 869231 + | penicillin-binding protein 1B Spea_0706 869221 - 869709 + | hypothetical protein Spea_0707 870991 - 869807 - | sugar efflux transporter TERM 985 870938 - 870926 - G 83 -6.2 -5.01422 | GGAGACAAAAACAAA GGCG GTGAG CGCC AGTAAAAGCACCGGA Spea_0708 871843 - 871391 - | GCN5-related N-acetyltransferase Spea_0709 872829 - 872041 - | PepSY-associated TM helix domain-containing protein TERM 986 872333 - 872363 + g 74 -6 -4.57341 | overlap 872334 GTCCATTCGATAAGG TCGCTATCGGCTAG GTA CAAGCCTGTGGCGG TTTTTAGCCAAAGTT Spea_0710 874025 - 873114 - | hypothetical protein Spea_0711 874521 - 874000 - | FMN-binding domain-containing protein TERM 987 874170 - 874159 - GR 76 -4.4 -5.00616 | opp_overlap 874159 CTGGTCGGTAAAAAA GTCA TGCC TGAC TTCATCACCACGACT TERM 988 874577 - 874603 + r 70 -9.4 -2.5507 | opp_overlap 874577 874579 874582, overlap 874576 TTGGCTCGGGAGACA GATAAGTGCCCA AAC TGGGCACTCACC CTATTGCTTAAGTAC TERM 989 874603 - 874577 - R 91 -13.8 -2.87132 | opp_overlap 874577 874576, overlap 874579 874582 TTGGCTCGGGAGACA GATAAGTGCCCA AAC TGGGCACTCACC CTATTGCTTAAGTAC TERM 990 874601 - 874579 - R 84 -12.8 -2.98823 | opp_overlap 874577 874576, overlap 874577 874582 GGCTCGGGAGACAGA TAAGTGCCCA AAC TGGGCACTCA CCCTATTGCTTAAGT TERM 991 874598 - 874582 - R 90 -12.3 -3.64198 | opp_overlap 874577 874576, overlap 874579 874577 TCGGGAGACAGATAA GTGCCCA AAC TGGGCAC TCACCCTATTGCTTA Spea_0712 875814 - 874636 - | phosphate-selective porin O and P TERM 992 876040 - 876022 - R 100 -14.6 -5.61596 | opp_overlap 876022 AGTGGCATAAAAAAA GGTGAGCC TCA GGCTCACC TTTTTTAAAAGAAAA TERM 993 876022 - 876040 + r 100 -14.6 -5.00616 | opp_overlap 876022 AGTGGCATAAAAAAA GGTGAGCC TCA GGCTCACC TTTTTTAAAAGAAAA Spea_0713 878292 - 876103 - | TonB-dependent receptor TERM 994 876774 - 876784 + g 76 -8.2 -4.07568 | overlap 876754 TGCCTGGAGAGGCGG GGGC AAA GCCC TTTTGAACGCCAGCA TERM 995 877952 - 877973 + g 73 -2.2 -5.24531 | overlap 877953 GCCGGCGCAGCGAGT ACACCGTC CTCCAT GATGGTGA TTTTTTCTGAGCGAT Spea_0714 878528 - 879232 + | hypothetical protein TERM 996 879315 - 879290 - f 86 -7.6 -5.10461 | opp_overlap 879290 GTCAGTTAATAAAAA CCACTTAAGC TATTTG GCTTGAGTGG TTTTTTGTTGTTTGG TERM 997 879290 - 879315 + F 100 -10.5 -5.72254 | opp_overlap 879290 GTCAGTTAATAAAAA CCACTTAAGCT ATTT GGCTTGAGTGG TTTTTTGTTGTTTGG TERM 998 879559 - 879543 - f 71 -9.4 -2.83641 | GAAGGTAGCAGGAGA GTGGGG AGTAA CCCCAC ACCGACGAGGCAACT TERM 999 879833 - 879843 + F 76 -2.4 -5.4251 | AAGTCACTGTCGTTT GTCG CTG CGCC TTTTTTCTATCTAAC TERM 1000 879947 - 879960 + F 72 -3.1 -5.02606 | opp_overlap 879947, overlap 879947 TCCGATTATTAATAA CTCTT ATTA GAGAG TTTTGTTGTTTAATA TERM 1001 880278 - 880288 + G 79 -4.6 -5.21709 | CACTATTTTGGATGT GGCT AGC GGCC TTTTTTGGTATGGCG Spea_0715 879989 - 881359 + | amino acid carrier protein TERM 1002 881457 - 881426 - f 81 -6.6 -4.8048 | gap 1, opp_overlap 881429, overlap 881429 CGGCTAGATGAAAAA TAAGCCCGCC-CA TCATTAT TGAGGCGGGCTTT TTATTAGGTTCTTGC TERM 1003 881429 - 881454 + F 90 -8.3 -5.14645 | gap 1, opp_overlap 881426 881429 CTAGATGAAAAATAA GCCCGCC-CA TCATTAT TGAGGCGGGC TTTTTATTAGGTTCT TERM 1004 881454 - 881429 - f 87 -8.3 -4.50988 | gap 1, opp_overlap 881429, overlap 881426 CTAGATGAAAAATAA GCCCGCC-CA TCATTAT TGAGGCGGGC TTTTTATTAGGTTCT TERM 1005 883457 - 883442 - g 73 -7.6 -4.08767 | opp_overlap 883441 883444 GGCAGGCTGGGAAAA CACCTT AGGT AAGGTG ATTAACTCTGAACTG TERM 1006 883818 - 883796 - g 73 -9.9 -3.43203 | overlap 883790 883811 GCAGGAGAAGATCAA CCTTGCACT GAATG AGCGCAAGG CCGCGTCACAGAAGC TERM 1007 883916 - 883905 - g 78 -5.8 -4.87626 | overlap 883907 883911 CTCGAAGAGCAAAAA GAGC AAGC GCTC GAAGCGCGCATGGAA TERM 1008 883923 - 883911 - g 72 -9.1 -3.62531 | overlap 883905 883907 GAGCAAAAAGAGCAA GCGCT CGA AGCGC GCATGGAAAAGAATG Spea_0716 881772 - 885446 + | hypothetical protein Spea_0717 885446 - 886099 + | hypothetical protein Spea_0718 886101 - 887321 + | hypothetical protein TERM 1009 887758 - 887773 + F 100 -9 -5.61596 | opp_overlap 887758 AACGGCCAAGAAAAA GCACCT TTAA AGGTGC TTTTTTTATGAGCAT TERM 1010 887773 - 887758 - f 90 -9 -5.08088 | opp_overlap 887758 AACGGCCAAGAAAAA GCACCT TTAA AGGTGC TTTTTTTATGAGCAT Spea_0719 888179 - 889435 + | sodium:dicarboxylate symporter TERM 1011 889502 - 889474 - T 93 -13.3 -3.33744 | opp_overlap 889479, overlap 889479 CGCTGTTTTAAAAAG GAAAATGCCAGCA ATT TGCTGGCATTTTT GTTTTTAGATTAAAC TERM 1012 889479 - 889497 + T 100 -13.2 -5.63236 | opp_overlap 889474 889479 TTTTAAAAAGGAAAA TGCCAGCA ATT TGCTGGCA TTTTTGTTTTTAGAT TERM 1013 889497 - 889479 - T 100 -13.2 -4.77757 | opp_overlap 889479, overlap 889474 TTTTAAAAAGGAAAA TGCCAGCA ATT TGCTGGCA TTTTTGTTTTTAGAT Spea_0720 890950 - 889568 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 1014 890831 - 890860 + g 86 -13.7 -3.28712 | TCGGCTCATCACTTG GCGACTATCGACA CAGG TATCGATAGTCGC TTCTGGCACGAGACG Spea_0721 892977 - 890950 - | histidine kinase TERM 1015 893415 - 893405 - g 73 -4 -4.85177 | AAATGAGATGAAAAA CTTT AAA AAAG CAGTGTGTATTGCAA TERM 1016 893646 - 893625 - g 74 -7.3 -4.21141 | GCTGAAGAAACTAAA CATGAGCAC TACA ATGCCCATG AATCTCATTTCCCTG Spea_0722 893397 - 895187 + | flavocytochrome c TERM 1017 895217 - 895184 - f 70 -5.6 -4.42748 | gap 1, opp_overlap 895184, overlap 895181 GTACTCTAAAAAGAA TTAGTCTAAGAAGAA CTAGT CTCTT-TTAGACTAA TCTTGGAAGTGTTAG TERM 1018 895309 - 895277 - f 83 -4.9 -5.21709 | opp_overlap 895282, overlap 895282 CCTCAGATTAAAAAA CAAAAGCCTTTATCT TAT AGATGGAGGCTTTTT TGTTTTCTTAGTTTC TERM 1019 895282 - 895304 + F 100 -9.2 -5.92399 | opp_overlap 895277 895282 GATTAAAAAACAAAA GCCTTTATCT TAT AGATGGAGGC TTTTTTGTTTTCTTA TERM 1020 895304 - 895282 - f 87 -4.8 -5.45813 | opp_overlap 895282, overlap 895277 GATTAAAAAACAAAA GCCTTTATCT TAT AGATGGAGGC TTTTTTGTTTTCTTA TERM 1021 895374 - 895360 - f 70 -8.6 -3.35088 | overlap 895349 AAAGGCGTGAAGCAA TCAAGC TGC GCTTGA TAAAGGTCGAGGCGT Spea_0723 895957 - 896763 + | alpha/beta hydrolase fold TERM 1022 897166 - 897180 + T 72 -10 -2.53581 | opp_overlap 897157 ATTGAATGACTTTGG TCAGGC GCA GCCTGA TGCATTACCAATGTA Spea_0724 898313 - 897237 - | hypothetical protein TERM 1023 897903 - 897932 + g 72 -5.8 -4.49531 | overlap 897904 AAGCTCTATTCTTTT CTGCTGGCTAAA CTGGTT TTTAGTCAGCAA TTTATTCATTTTGTT TERM 1024 898826 - 898845 + H 79 -8.6 -4.09243 | gap 1, opp_overlap 898826 TCGGGTGATGCAAGA GGGGGA-AG CTG CTGTCCCCC TTTTGCCCGAGTGTG TERM 1025 898856 - 898877 + H 75 -8.1 -4.07618 | gap 1 CCCCCTTTTGCCCGA GT-GTGAGCT GGA AGCTCACGAC TTTAGTTGTTAGACG Spea_0725 899535 - 900539 + | basic membrane lipoprotein TERM 1026 900560 - 900584 + F 78 -7.1 -4.33417 | ATTAAGATTGATTTA GCTCCTTGGTT ACT GACTGGGGAGC TTTATTATAAGTGGC TERM 1027 901345 - 901335 - g 74 -5.4 -4.62475 | ACCCATAAACTAAAA GAGA TCC TCTC TGCCACTGACAATGT Spea_0726 900666 - 902282 + | ABC transporter related TERM 1028 903391 - 903377 - g 82 -7 -4.78077 | CTTAATCAAAAGAAA GCAGCC CTA GGCAGC GTTAAGGCGGAGGCA Spea_0727 902279 - 903409 + | inner-membrane translocator TERM 1029 903551 - 903573 + G 90 -13.4 -3.48593 | opp_overlap 903540 AAGATGCTCTCCGCT GCCTTTGCCG CAG CGGCAACGGC TTCTATAACAGGCTC Spea_0728 903413 - 904378 + | inner-membrane translocator TERM 1030 904459 - 904482 + F 73 -9.6 -3.12351 | opp_overlap 904461 CTCACACTCGGGCAA GAGGGGGA CAACAGCT TCCCCCTC TTGCATCTCCCCAGC TERM 1031 904602 - 904575 - f 72 -8.4 -3.53012 | overlap 904579 TCCTGCCCCGCGAAA GCTACGCCGACA TCCA TGTCGGCATCAC GTGATTTATTCCAAC TERM 1032 904598 - 904579 - f 72 -10 -2.64155 | overlap 904575 GCCCCGCGAAAGCTA CGCCGACA TCCA TGTCGGCA TCACGTGATTTATTC TERM 1033 905036 - 905001 - g 91 -6.2 -5.58179 | opp_overlap 905005, overlap 905005 GAGCATAATAAAAAA GAAATCGAGATAAGAG CAAA CGCATATCTCGATTTG GTTAATGCCGTCTCA TERM 1034 905032 - 905005 - g 87 -7 -5.22768 | opp_overlap 905005, overlap 905001 ATAATAAAAAAGAAA TCGAGATAAGAG CAAA CGCATATCTCGA TTTGGTTAATGCCGT Spea_0729 904899 - 905315 + | hypothetical protein Spea_0730 905386 - 905985 + | hypothetical protein TERM 1035 906299 - 906320 + T 75 -8.1 -4.07618 | gap 1 CCCCTTCTTGGCCGT GT-GTGAGCT GGA AGCTCACGAC TTTAGTTGTTAGACG TERM 1036 906389 - 906427 + T 81 -7.6 -4.49644 | opp_overlap 906394, overlap 906394 CGACAACTATGCAAA AAAAAGCACAACCCTA ACTAACA TAGGATTGTGCTTTTC TTTTAGATTTTTGCT TERM 1037 906422 - 906394 - T 100 -9.7 -5.82316 | opp_overlap 906389 906394 ACTATGCAAAAAAAA GCACAACCCTA ACTAACA TAGGATTGTGC TTTTCTTTTAGATTT TERM 1038 906394 - 906422 + T 86 -7.5 -5.14698 | opp_overlap 906394, overlap 906389 ACTATGCAAAAAAAA GCACAACCCTA ACTAACA TAGGATTGTGC TTTTCTTTTAGATTT Spea_0731 907539 - 906550 - | fructose-1,6-bisphosphatase TERM 1039 907677 - 907693 + H 81 -3 -5.54338 | overlap 907668 TTCCACTGCGACGAG TTGCAT CATTT GTGCAA TTTTTGTTTTGCTTA Spea_0732 907792 - 910038 + | peptidase S9B dipeptidylpeptidase IV subunit TERM 1040 910400 - 910429 + T 100 -12.3 -4.15632 | opp_overlap 910406, overlap 910406 CTAAATCTGGGCATA AAAAAAGCCAGTC AATC GACTGGCTTTTTA TTTATATGTACTGCT TERM 1041 910423 - 910406 - T 100 -11.3 -5.60993 | opp_overlap 910400 910406 CTGGGCATAAAAAAA GCCAGTC AATC GACTGGC TTTTTATTTATATGT TERM 1042 910406 - 910423 + T 100 -11.3 -5.4433 | opp_overlap 910406, overlap 910400 CTGGGCATAAAAAAA GCCAGTC AATC GACTGGC TTTTTATTTATATGT TERM 1043 910489 - 910459 - T 76 -9.2 -3.6336 | gap 1, overlap 910487 TTACAGTACATATAA CGG-AGCTTAGAA TTAATC TTCTAAGCTACCG CAGAAACGGTAACCT Spea_0733 911187 - 910471 - | two-component response regulator Spea_0734 911749 - 912105 + | hypothetical protein TERM 1044 913510 - 913488 - g 79 -12 -3.20164 | opp_overlap 913504 913508 CGATAGCGAAGGCAA CACCACAACC CTA GGCCGTGGTG GTAGTGATTACTCTG Spea_0735 912895 - 914265 + | aspartate kinase III Spea_0736 914301 - 915407 + | succinylglutamate desuccinylase/aspartoacylase Spea_0737 916146 - 915685 - | DNA-binding transcriptional regulator AsnC TERM 1045 916350 - 916377 + r 88 -11.3 -3.72893 | GTATTGGGGCGATTT GCGCCAAGGGG ATGAGC TCCTTTGGCGC TTTGCTAAAGCAATA Spea_0738 917088 - 916411 - | pseudouridine synthase Spea_0739 917492 - 917202 - | hypothetical protein Spea_0740 918052 - 917531 - | methyltransferase type 12 Spea_0741 918467 - 918057 - | hypothetical protein TERM 1046 918779 - 918798 + H 93 -9.3 -5.31519 | opp_overlap 918771 918779 AGAATAAGCTGGAAA GCGAGCT GTCAGG AGCTCGC TTTTTCTTTGCCTGT TERM 1047 918798 - 918779 - H 76 -9.3 -3.6445 | opp_overlap 918779, overlap 918771 AGAATAAGCTGGAAA GCGAGCT GTCAGG AGCTCGC TTTTTCTTTGCCTGT Spea_0742 919122 - 920111 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Spea_0743 920124 - 920861 + | dienelactone hydrolase TERM 1048 920908 - 920936 + T 95 -14.7 -2.87564 | opp_overlap 920913, overlap 920913 TTAATCAATGCAAAT AAAAAGGGCCGAT ATA ATCGGCCCTTTTA TCTATCACGGAGTAA TERM 1049 920913 - 920931 + T 100 -14.6 -4.60797 | opp_overlap 920913, overlap 920908 CAATGCAAATAAAAA GGGCCGAT ATA ATCGGCCC TTTTATCTATCACGG TERM 1050 920931 - 920913 - T 100 -14.6 -5.33026 | opp_overlap 920913 920908 CAATGCAAATAAAAA GGGCCGAT ATA ATCGGCCC TTTTATCTATCACGG Spea_0744 921517 - 920984 - | hypothetical protein TERM 1051 921813 - 921789 - H 70 -8.5 -3.28712 | opp_overlap 921791, overlap 921791 GTCGTTTGGGTATAA TAGCGCCCCAA TTG TCGGAGCGCTC ATGTCAGATTTTCAA TERM 1052 921811 - 921791 - H 79 -11.1 -3.21276 | opp_overlap 921791, overlap 921789 CGTTTGGGTATAATA GCGCCCCAA TTG TCGGAGCGC TCATGTCAGATTTTC Spea_0745 921814 - 922557 + | spermine synthase Spea_0746 923053 - 923622 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Spea_0747 923915 - 925489 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1053 925511 - 925526 + F 100 -6.8 -5.75599 | opp_overlap 925511 AATTCTTATTGAAAA GTCAGC AAAT GCTGGC TTTTTTTATGCTTTA TERM 1054 925794 - 925819 + G 74 -10.6 -3.12595 | overlap 925793 CACTCCAAGTTTGCG CCACTTATGA CCGTTA TCATAAGTGG TCTTGCGTGGTTAAA TERM 1055 926214 - 926204 - g 74 -6.8 -4.22475 | opp_overlap 926203 926205 CATCGAAAACAAGAA GCTG TTA CAGC AGTTTAAACGTTTGG Spea_0748 925608 - 926735 + | diguanylate cyclase Spea_0749 926991 - 926794 - | hypothetical protein TERM 1056 927417 - 927382 - R 100 -12.8 -4.3739 | opp_overlap 927386, overlap 927386 CATTGTTTTAGAAAA CGAAGGTCTTAGCTTA ATCA TAAGCTAAGACCTTTA TTCATTTACGCTATG TERM 1057 927413 - 927386 - R 100 -15.8 -3.75115 | opp_overlap 927386, overlap 927382 GTTTTAGAAAACGAA GGTCTTAGCTTA ATCA TAAGCTAAGACC TTTATTCATTTACGC TERM 1058 927386 - 927413 + r 100 -15.8 -4.39696 | opp_overlap 927386 927382 GTTTTAGAAAACGAA GGTCTTAGCTTA ATCA TAAGCTAAGACC TTTATTCATTTACGC Spea_0750 928855 - 927428 - | hypothetical protein TERM 1059 929027 - 929048 + r 86 -11.7 -3.28416 | opp_overlap 929025 929032, overlap 929030 TTTCTGCAATAATTG CAACAGCTT GATT AAGCTGTTG TTGATGTAAGTGCTA Spea_0751 929591 - 929175 - | hypothetical protein TERM 1060 929303 - 929319 + g 76 -5.1 -4.77986 | overlap 929304 CAGGGGCTGGGTAGT TCGCCTT GTT AAGGTGG TTTTTGACTCTTTCA Spea_0752 930076 - 931251 + | FAD dependent oxidoreductase Spea_0753 931409 - 932596 + | chromate transporter TERM 1061 932623 - 932648 + T 100 -17.7 -5.15634 | opp_overlap 932623 CATACAAAATAAAAA GGCGGTAAGAG CATG CTCTTACCGCC TTTTTTGATCGACTA TERM 1062 932648 - 932623 - T 100 -17.7 -5.58522 | opp_overlap 932623 CATACAAAATAAAAA GGCGGTAAGAG CATG CTCTTACCGCC TTTTTTGATCGACTA TERM 1063 932672 - 932697 + T 83 -9 -4.10855 | TCGACTATGATTCTA GCTAGACGAG TTCTGC CTCGGCTAGC TTTTCAGCCACTTTT Spea_0754 936995 - 932673 - | formate dehydrogenase, alpha subunit TERM 1064 933660 - 933634 - G 79 -10.2 -3.51785 | overlap 933632 GCAGAAAAACCAATA TCGGCGCAAAGA TCT TCTTTGCCCCAA GCTTCACGGAAGCGC Spea_0755 938285 - 937293 - | Ion transport 2 domain-containing protein Spea_0756 938835 - 939716 + | peptide chain release factor 2 Spea_0757 939729 - 941234 + | lysyl-tRNA synthetase TERM 1065 941289 - 941274 - f 93 -10.4 -4.66953 | opp_overlap 941274 GTAAGACTTTAAAAA CCAGCC ACTA GGCTGG TTTTTTTATGTCACA TERM 1066 941274 - 941289 + F 100 -10.4 -5.71712 | opp_overlap 941274 GTAAGACTTTAAAAA CCAGCC ACTA GGCTGG TTTTTTTATGTCACA Spea_0758 941881 - 944400 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Spea_0759 945015 - 944422 - | pseudouridine synthase Spea_0760 945297 - 946088 + | glucosamine-6-phosphate isomerase TERM 1067 946137 - 946156 + F 100 -7.8 -5.86976 | opp_overlap 946137 TATCGATTTATTGAA GGACAAGC ATTA GCATGTCC TTTTTTGTTTTCTGC TERM 1068 946484 - 946498 + F 75 -10 -3.05997 | opp_overlap 946483 946484, overlap 946479 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTGCTTTATAACAG TERM 1069 946498 - 946484 - f 73 -10 -2.84602 | opp_overlap 946484 946479, overlap 946483 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTGCTTTATAACAG Spea_0761 946690 - 947232 + | hypothetical protein TERM 1070 947307 - 947295 - f 77 -6.3 -4.61824 | TAACAATAACTAAAA TACCT TGA AGGTA AAACATGACTGAAGC Spea_0762 947312 - 947983 + | nitroreductase Spea_0763 948023 - 948340 + | cupin family protein Spea_0764 948489 - 950438 + | peptidase U32 Spea_0765 950515 - 950889 + | hypothetical protein TERM 1071 950963 - 950940 - T 85 -12.4 -3.15236 | opp_overlap 950940 TAAAGCTAGAGCTAA GGCGCATTCG GTAA CGATTGCGCC TTTTTATTTTAGGCC TERM 1072 950940 - 950963 + T 100 -12.4 -5.45802 | opp_overlap 950940 TAAAGCTAGAGCTAA GGCGCATTCG GTAA CGATTGCGCC TTTTTATTTTAGGCC Spea_0766 951454 - 951008 - | Fe-S metabolism associated SufE TERM 1073 951432 - 951422 - G 80 -6.8 -4.66833 | GGTTAATGCTAAAAA CTGC TCT GCAG AGGGGTGAACTGACT Spea_0767 952971 - 951760 - | SufS subfamily cysteine desulfurase TERM 1074 953033 - 953004 - R 100 -15.1 -5.35224 | TCGATAAAAAGAAAA GGCGCTCAGATCT TGTA AGATCTGAGCCCC TAAAGCAAGTTAGAC TERM 1075 953131 - 953101 - R 82 -6.2 -4.97405 | ATTGATAAAAATAAA GGTGCATAGATTTT TTT AAGATCTAAACACC TAAAGCAAGTTAGAC Spea_0768 954215 - 953172 - | aldo/keto reductase TERM 1076 953960 - 953982 + g 77 -11.4 -3.2655 | overlap 953955 GTGCCGCGACTTTAG TCGCGATGAT GAG ATTATCGCGA TTGCCTCTTTGCTTA Spea_0769 955282 - 954341 - | MarR family transcriptional regulator TERM 1077 954499 - 954483 - G 74 -8.7 -3.90744 | GTCGTTTCTAAATAA CAGGACT CAT AGCCCTG CTCACTGGCAAAGCG TERM 1078 954947 - 954964 + g 74 -7.1 -4.35189 | AAGTTGGTTCTGTTG CTCATTA AGCT TAATGAG TTGTTTCTTTCCCTT Spea_0770 955915 - 955376 - | NTPase TERM 1079 956695 - 956708 + G 70 -2.3 -4.95484 | overlap 956685 956702 ACTTACCTCGCTCAC CGTGG CTTG TCGCG TTTTGTTTGCTCATC Spea_0771 956473 - 957759 + | aromatic amino acid permease TERM 1080 958232 - 958219 - g 81 -8.1 -4.41302 | GAGCAAACTAAGAAA CTGCC TATG GGCAG CGAAAAGCAGCTAGT TERM 1081 958710 - 958726 + G 73 -9.5 -3.38046 | opp_overlap 958709 958703 958710, overlap 958709 CGACCCAATGGAAAT CGTTGAT TGG ATCAACG TATTTGCAATGGCAG Spea_0772 957934 - 959301 + | L-serine dehydratase 1 TERM 1082 959336 - 959367 + T 91 -13.2 -3.00786 | opp_overlap 959343, overlap 959343 AGTCTGGTATGAGTA GTAAAAAGGCCATC AGTT GATGGCCTTTTTAA TGTCTAGGTTTTGAG TERM 1083 959343 - 959360 + T 95 -11.3 -4.84527 | opp_overlap 959343, overlap 959336 TATGAGTAGTAAAAA GGCCATC AGTT GATGGCC TTTTTAATGTCTAGG TERM 1084 959360 - 959343 - T 95 -11.3 -4.78107 | opp_overlap 959343 959336 TATGAGTAGTAAAAA GGCCATC AGTT GATGGCC TTTTTAATGTCTAGG Spea_0773 959828 - 959385 - | GCN5-related N-acetyltransferase TERM 1085 960187 - 960205 + G 74 -10.2 -3.16683 | opp_overlap 960184 TACCTTATGGAACGG GAGCAGCC ACC GGCTGCAC TTCATCCAATGCACT Spea_0774 959968 - 960258 + | hypothetical protein TERM 1086 960252 - 960240 - f 91 -6.3 -5.51353 | TAAAAATAAGAAAAA CTCAA AAT TTGAG GCGTAAAATTATTGA Spea_0775 960429 - 961727 + | sodium:dicarboxylate symporter TERM 1087 961771 - 961798 + T 100 -15.8 -3.88583 | opp_overlap 961778, overlap 961778 CTAATGGTGGGCCAA TAAAAAACCGCC GAAA GGCGGTTTTTTA TTTCTGGAACATTTA TERM 1088 961791 - 961778 - T 100 -9.5 -5.4505 | opp_overlap 961771 961778 TGGGCCAATAAAAAA CCGCC GAAA GGCGG TTTTTTATTTCTGGA TERM 1089 961778 - 961791 + T 100 -9.5 -5.72622 | opp_overlap 961778, overlap 961771 TGGGCCAATAAAAAA CCGCC GAAA GGCGG TTTTTTATTTCTGGA Spea_0776 962440 - 962027 - | protein of unknown function DUF306 Meta and HslJ Spea_0777 962519 - 962728 + | hypothetical protein TERM 1090 962907 - 962925 + T 76 -7.4 -4.19746 | opp_overlap 962910, overlap 962910 CAGCGAAGCGTCCTA GAACCTAG CAC CTAGGATC TTCTTTTAGAATCCC Spea_0778 963865 - 962918 - | diguanylate cyclase Spea_0779 964148 - 964705 + | GCN5-related N-acetyltransferase TERM 1091 965030 - 965048 + G 73 -7.5 -4.16921 | AACAGCTGGAGTTTA TGTGCAT GGATA ATGCACA TTTTGACCATTGTTG Spea_0780 964714 - 965064 + | hypothetical protein TERM 1092 965177 - 965206 + T 79 -10.7 -3.17492 | GCAGACTTGGTTGAG CTGGGGAGACGTT AATC AACGGCTCCCCAA TTGCCTCATTCTTTC Spea_0781 965885 - 965349 - | hypothetical protein TERM 1093 966021 - 966005 - H 79 -9.5 -3.62096 | TCCTATGACCTTAAA GTTAGAC TCT GTCTAAC AACTTAACGTTGTGG Spea_0782 966376 - 967074 + | hypothetical protein TERM 1094 967185 - 967164 - T 75 -8.1 -4.07618 | gap 1 CGTCTAACAACTAAA GTCGTGAGCT TCC AGCTCAC-AC TCGGGCAAAAGGGGG Spea_0783 968558 - 967539 - | hypothetical protein TERM 1095 969210 - 969231 + H 70 -8.1 -3.72576 | gap 1 CCCCTTCTTGGCCGT GT-GTGAGCT GGA AGCTCACGAC TTTGGTCAGGCGCAG TERM 1096 969237 - 969251 + H 72 -10 -2.53759 | AGCTCACGACTTTGG TCAGGC GCA GCCTGA TGCCTTAAAAGTCTT TERM 1097 969320 - 969336 + H 72 -9.5 -3.04144 | TGATTGAGCTAGTAT GTTAGAC GAA GTCTAAC TGTTAACCCTAGGCC Spea_0784 969568 - 970395 + | hypothetical protein TERM 1098 970416 - 970455 + F 82 -11.1 -3.56727 | gap 1, opp_overlap 970422, overlap 970419 970422 ACTCTTTGCCTTCCT C-AATAATACTCATGAAC TGTGT GTTCATGGGTATTATTCG TTGTAGTTCATTCAC TERM 1099 970419 - 970451 + F 95 -13 -3.50422 | opp_overlap 970422, overlap 970416 970422 CTTTGCCTTCCTCAA TAATACTCATGAAC TGTGT GTTCATGGGTATTA TTCGTTGTAGTTCAT TERM 1100 970422 - 970448 + F 84 -10.3 -3.87584 | opp_overlap 970422, overlap 970419 970416 TGCCTTCCTCAATAA TACTCATGAAC TGTGT GTTCATGGGTA TTATTCGTTGTAGTT Spea_0785 970701 - 971528 + | hypothetical protein TERM 1101 971552 - 971584 + T 72 -8.6 -3.50422 | opp_overlap 971555 971557, overlap 971549 971555 CTTTGCCTTCCTCAA TAATACTCATGAAC TGTGT GTTCATGGGGATTA TTCGTTGTAGTTCAT Spea_0786 972124 - 971651 - | GCN5-related N-acetyltransferase TERM 1102 972443 - 972456 + r 93 -9.5 -5.10208 | opp_overlap 972443, overlap 972442 CCGGACATAAAAAAA CCGCC AAGC GGCGG TTTTTATTGGCGTTG TERM 1103 972456 - 972443 - R 100 -9.5 -5.71712 | opp_overlap 972442 972443 CCGGACATAAAAAAA CCGCC AAGC GGCGG TTTTTATTGGCGTTG Spea_0787 973656 - 972502 - | S-adenosylmethionine synthetase TERM 1104 974328 - 974312 - g 71 -8 -3.83756 | AAAGCACAACCCAAA CAACCC TGAGT GGGTTG ATCGTGACCGTTTTA Spea_0788 974163 - 976154 + | transketolase TERM 1105 976216 - 976177 - f 83 -10.8 -3.75153 | opp_overlap 976182, overlap 976182 976185 CGGTGTTAAGGCAAA TGATACAACGGCTTACCT AATG AGGTAGGCCGTTGTTTTA TCAATAAACAGGCTG TERM 1106 976211 - 976182 - f 100 -15.1 -3.03781 | opp_overlap 976182, overlap 976177 976185 TTAAGGCAAATGATA CAACGGCTTACCT AATG AGGTAGGCCGTTG TTTTATCAATAAACA TERM 1107 976182 - 976211 + F 100 -17.3 -4.42386 | opp_overlap 976177 976182 976185 TTAAGGCAAATGATA CAACGGCTTACCT AATG AGGTAGGCCGTTG TTTTATCAATAAACA TERM 1108 976208 - 976185 - f 83 -11 -3.65112 | opp_overlap 976182, overlap 976182 976177 AGGCAAATGATACAA CGGCTTACCT AATG AGGTAGGCCG TTGTTTTATCAATAA Spea_0789 976253 - 977272 + | erythrose 4-phosphate dehydrogenase TERM 1109 977482 - 977500 + F 78 -3 -5.40072 | opp_overlap 977481, overlap 977483 977485 GTCCTCGCAGCGAAG CGTCCTAG GAT CTAGGTCC TTTTTTTAAAGCAAA Spea_0790 977642 - 978817 + | phosphoglycerate kinase Spea_0791 979126 - 980190 + | fructose-1,6-bisphosphate aldolase TERM 1110 980233 - 980272 + F 78 -10.9 -2.94962 | opp_overlap 980223 980243, overlap 980243 980256 AAGCACCTATGCTTT AGCATAAAAATACCTGC CAATGT GCAGGTATTTTTTTGCC TGCTGTTTATTGGCT TERM 1111 980262 - 980243 - f 86 -7.9 -4.91109 | opp_overlap 980243 980233 980256 GCTTTAGCATAAAAA TACCTGC CAATGT GCAGGTA TTTTTTTGCCTGCTG TERM 1112 980243 - 980262 + F 93 -7.9 -5.48825 | opp_overlap 980243, overlap 980233 980256 GCTTTAGCATAAAAA TACCTGC CAATGT GCAGGTA TTTTTTTGCCTGCTG Spea_0792 980408 - 981148 + | hypothetical protein TERM 1113 981226 - 981242 + F 100 -10.1 -5.77734 | opp_overlap 981226 981228 CTTTTGTCAATAAAA GGCACCC AAT GGGTGTC TTTTTGTTTTTGTTT TERM 1114 981242 - 981226 - f 82 -7.9 -4.63218 | opp_overlap 981226, overlap 981228 CTTTTGTCAATAAAA GGCACCC AAT GGGTGTC TTTTTGTTTTTGTTT Spea_0793 981469 - 982215 + | putative transcriptional regulator, CadC Spea_0794 982334 - 982738 + | hypothetical protein TERM 1115 983826 - 983843 + G 72 -4.9 -4.57073 | gap 1 TGACTTTGGCGGTGA TCT-ACGG TTT CCGTGAGA TTTTTAAAGACGATA Spea_0795 982985 - 984418 + | hypothetical protein Spea_0796 986851 - 984632 - | putative diguanylate cyclase TERM 1116 986203 - 986224 + g 72 -5.1 -4.67635 | overlap 986201 ACATCATTAGCGGCG CCTGTTTAC TCGA GTAGGCGGG TTTTATGCTTTTGAG Spea_0797 987585 - 986977 - | radical SAM domain-containing protein TERM 1117 987713 - 987695 - H 93 -10.3 -4.73388 | opp_overlap 987695 AAGGTGCATTAAAAA GGGAGAC TCAAT GTCTCCC TTTTTTAAATTGGCT TERM 1118 987695 - 987713 + H 93 -10.3 -5.16572 | opp_overlap 987695 AAGGTGCATTAAAAA GGGAGAC TCAAT GTCTCCC TTTTTTAAATTGGCT TERM 1119 988155 - 988122 - g 83 -2.4 -5.64274 | overlap 988123 CGATTTAGAAAAAAA GTACTTAGCCGAAC GCTCTG GTTCGCCAAAGTAA AAGGCACCATAAAGT Spea_0798 987772 - 988155 + | transposase TERM 1120 988996 - 988974 - g 100 -11.3 -5.42131 | opp_overlap 988974 GAAGTACATAAAAAA GCCAGTCGG GAGTT CCAACTGGC TTAATAAAAACCGTC TERM 1121 988974 - 988996 + G 71 -9.8 -3.14344 | opp_overlap 988974 GAAGTACATAAAAAA GCCAGTCGGG AGT TCCAACTGGC TTAATAAAAACCGTC Spea_0799 988272 - 989000 + | integrase catalytic region Spea_0800 992185 - 989039 - | acriflavin resistance protein TERM 1122 990581 - 990562 - G 74 -3.5 -5.08601 | overlap 990563 GCACCCCAACAAAAA CCGCTAC CGTATT GTAGCGC TGCACGATACAACGC TERM 1123 991799 - 991783 - G 71 -3.7 -4.87626 | opp_overlap 991785, overlap 991776 GCTTAATACGAAAAA TATTGGG TTT CTCAATA TTCACCGGAAAGGTG Spea_0801 993444 - 992185 - | RND family efflux transporter MFP subunit TERM 1124 993281 - 993291 + g 76 -8.2 -4.1891 | opp_overlap 993272 ACAATAGGCACTGGC GCCG TAT CGGC TTTCTGTTCAGGAGC TERM 1125 993605 - 993577 - R 100 -13.3 -4.03995 | opp_overlap 993582, overlap 993560 993582 TGCTGTATAAAAACA GAAAAGGGTCACA TGA TGTGACCCTTTTA GATTAAGAGGAAGTG TERM 1126 993582 - 993600 + r 100 -13.2 -4.27316 | opp_overlap 993577 993582 TATAAAAACAGAAAA GGGTCACA TGA TGTGACCC TTTTAGATTAAGAGG TERM 1127 993600 - 993582 - R 100 -13.2 -5.02287 | opp_overlap 993582, overlap 993577 TATAAAAACAGAAAA GGGTCACA TGA TGTGACCC TTTTAGATTAAGAGG TERM 1128 993612 - 993633 + r 100 -5.9 -5.74684 | opp_overlap 993612 993615 ACCCTTTTAGATTAA GAGGAAGTG ATGT TACTTCTTC TTTTTCTTTTTGTTC Spea_0802 994859 - 993624 - | ATP-dependent RNA helicase SrmB Spea_0803 995723 - 994929 - | methyltransferase small TERM 1129 995028 - 995002 - G 73 -10.2 -3.01712 | opp_overlap 995000 995008, overlap 995006 TTTTTCTCGCGAATA TAAAGCTGCTGC TGG GCAGCATCTTCA AGTTTGGCCACTACA TERM 1130 995024 - 995006 - G 79 -8.8 -4.1891 | opp_overlap 995000 995008, overlap 995002 TCTCGCGAATATAAA GCTGCTGC TGG GCAGCATC TTCAAGTTTGGCCAC TERM 1131 995008 - 995022 + g 71 -10 -3.12668 | opp_overlap 995006 995002, overlap 995000 TCGCGAATATAAAGC TGCTGC TGG GCAGCA TCTTCAAGTTTGGCC TERM 1132 995234 - 995222 - G 76 -9.1 -3.65812 | CTGTCGGTAAGATAA GGCTG GCA CAGCC TTCAGGGCTTAACAG TERM 1133 996287 - 996315 + G 86 -3.1 -5.75945 | TGAGTATTGCAGACA CGCTAGGGTTA GGTTTTA TGACCTTTGCG TTTTTTTTGGGGGCT Spea_0804 996241 - 997587 + | branched-chain amino acid transport system II carrier protein TERM 1134 997670 - 997691 + F 100 -9.5 -5.95539 | TGGCATAATATTGAG GCGATGTTT CTAG GAACATCGC TTTTTTTGTTTAAAA TERM 1135 997933 - 997915 - f 76 -7.4 -4.19276 | overlap 997907 997926 GGAAAACCTTGAAAA GCCAAGAA AGG TTCTAGGC CCTAGGAAGGGCTGA TERM 1136 998051 - 998076 + F 73 -6.9 -4.21974 | gap 1, opp_overlap 998054, overlap 998055 998058 GCCCGTCCTCGCAGC GAAGCGTCCTAG GAT CTAGGTC-CTTC TTTATTAAATCGTAG TERM 1137 998343 - 998368 + G 72 -10.5 -2.87146 | overlap 998342 GCGCGCGCATGATGA GTAGCCTTAGA CGCT TCTATGGCTAC CTTATTGTCAAAAAG Spea_0805 998105 - 999007 + | tyrosine recombinase XerD Spea_0806 999232 - 999957 + | thiol:disulfide interchange protein DsbC TERM 1138 1000004 - 999981 - f 74 -9 -3.44443 | opp_overlap 999986 999995, overlap 999986 999995 CCGATATAAGACCAA CATAAGACAA AACA CTGTCTTATG AAGTACAGTCTTATA TERM 1139 1000062 - 1000027 - f 90 -13.4 -2.75997 | opp_overlap 1000036, overlap 1000036 GTCTTATAAAGTAAT CGCTAAAAAGGTGAGC CTAG GCTCACCTTTTTTGTG CCCCTTTTCTAGCAG TERM 1140 1000036 - 1000053 + F 100 -11.3 -5.25803 | opp_overlap 1000036 1000027 AGTAATCGCTAAAAA GGTGAGC CTAG GCTCACC TTTTTTGTGCCCCTT TERM 1141 1000053 - 1000036 - f 93 -11.3 -4.62872 | opp_overlap 1000036, overlap 1000027 AGTAATCGCTAAAAA GGTGAGC CTAG GCTCACC TTTTTTGTGCCCCTT Spea_0807 1000125 - 1001849 + | single-stranded-DNA-specific exonuclease RecJ TERM 1142 1001900 - 1001876 - T 70 -8.6 -3.44186 | opp_overlap 1001878, overlap 1001878 AATGACACCAAGGAA GAGGGATGCA CTAGT TGCATCCCTT TTTGTTTTCAGCCCT TERM 1143 1001878 - 1001898 + T 100 -11.2 -5.45802 | opp_overlap 1001876 1001878 TGACACCAAGGAAGA GGGATGCA CTAGT TGCATCCC TTTTTGTTTTCAGCC TERM 1144 1001898 - 1001878 - T 85 -11.2 -3.28487 | opp_overlap 1001878, overlap 1001876 TGACACCAAGGAAGA GGGATGCA CTAGT TGCATCCC TTTTTGTTTTCAGCC TERM 1145 1001938 - 1001919 - T 89 -12.2 -3.57144 | opp_overlap 1001919 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 1146 1001919 - 1001938 + T 89 -12.2 -3.44319 | opp_overlap 1001919 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 1147 1002307 - 1002293 - T 73 -10 -2.84602 | opp_overlap 1002293 1002288, overlap 1002292 CGCACTGTAGGAAAG CTCCCT TTT AGGGAG TCTGCTTTGTAACAC TERM 1148 1002293 - 1002307 + T 75 -10 -3.05997 | opp_overlap 1002292 1002293, overlap 1002288 CGCACTGTAGGAAAG CTCCCT TTT AGGGAG TCTGCTTTGTAACAC TERM 1149 1002353 - 1002332 - T 72 -8.7 -3.60948 | opp_overlap 1002325 1002332 1002333, overlap 1002333 TAACACATGGGCAAA GCCACCTTC TTAA GAAGGTGGA TTCTTTACTAGGTTT TERM 1150 1002332 - 1002353 + T 79 -8.7 -4.03174 | opp_overlap 1002332 1002333, overlap 1002325 1002333 TAACACATGGGCAAA GCCACCTTC TTAA GAAGGTGGA TTCTTTACTAGGTTT TERM 1151 1002352 - 1002333 - T 81 -12.2 -2.76087 | opp_overlap 1002325 1002332 1002333, overlap 1002332 AACACATGGGCAAAG CCACCTTC TTAA GAAGGTGG ATTCTTTACTAGGTT TERM 1152 1002333 - 1002352 + T 82 -12.2 -3.0082 | opp_overlap 1002333 1002332, overlap 1002325 1002332 AACACATGGGCAAAG CCACCTTC TTAA GAAGGTGG ATTCTTTACTAGGTT Spea_0808 1002876 - 1002397 - | AsnC family transcriptional regulator Spea_0809 1003095 - 1004396 + | hypothetical protein TERM 1153 1004534 - 1004484 - f 95 -12 -4.20025 | opp_overlap 1004484 AAGCTTGAACACAAA GCCAAGTCGGTACTCAGTTAACAG TCA CTGTTAATTGAATGTCGATTTGGC TTTTTAGTTTTCAGC TERM 1154 1004484 - 1004534 + F 100 -18.6 -5.0925 | opp_overlap 1004484 AAGCTTGAACACAAA GCCAAGTCGGTACTCAGTTAACAG TCA CTGTTAATTGAATGTCGATTTGGC TTTTTAGTTTTCAGC Spea_0810 1005284 - 1006612 + | serine transporter TERM 1155 1006706 - 1006690 - f 73 -9.5 -3.25802 | GATGAAAGTGATTAA GTTAGAC TGC GTCTAAC AATTAAAGTCGTGGG TERM 1156 1006847 - 1006833 - f 72 -8.6 -3.59202 | TACTGCTATAGACAA TCAAGC TGC GCTTGA TAAACGTCGTGAGCT TERM 1157 1007304 - 1007267 - f 79 -9.3 -3.80142 | gap 1, opp_overlap 1007269 1007270 1007297, overlap 1007269 1007270 CAGATAATATTTAAA GAT-GCAGCACAGATAAC AAC GTTATCTGTGCAGCTATT TAATAAGCTGTTATG TERM 1158 1007301 - 1007269 - f 95 -13.5 -3.47542 | opp_overlap 1007269 1007270 1007297, overlap 1007267 1007270 GATAATATTTAAAGA TGCAGCACAGATAAC AAC GTTATCTGTGCAGCT ATTTAATAAGCTGTT TERM 1159 1007269 - 1007302 + F 89 -11.9 -3.76379 | gap 1, opp_overlap 1007269 1007267 1007270, overlap 1007270 1007297 GATAATATTTAAAGA T-GCAGCACAGATAAC AAC GTTATCTGTGCAGCTA TTTAATAAGCTGTTA TERM 1160 1007300 - 1007270 - f 100 -17 -2.67802 | opp_overlap 1007269 1007270 1007297, overlap 1007269 1007267 ATAATATTTAAAGAT GCAGCACAGATAAC AAC GTTATCTGTGCAGC TATTTAATAAGCTGT TERM 1161 1007270 - 1007300 + F 100 -17 -3.46088 | opp_overlap 1007270 1007269 1007267, overlap 1007269 1007297 ATAATATTTAAAGAT GCAGCACAGATAAC AAC GTTATCTGTGCAGC TATTTAATAAGCTGT TERM 1162 1007852 - 1007838 - g 74 -7.2 -4.36931 | opp_overlap 1007838 TAAGGGACAGCAAAA TAGACA CTG TGTCTA TTAATCATACAACTT Spea_0811 1007342 - 1008724 + | hypothetical protein Spea_0812 1008854 - 1009267 + | NUDIX hydrolase TERM 1163 1009374 - 1009401 + T 72 -8.4 -3.53012 | overlap 1009378 GTTGGAATCAATCGC GTGATGCCGACA GGGA TGTCGGCGTAGC TTTCGCGGGGCAGGA TERM 1164 1009378 - 1009397 + T 72 -10 -2.64155 | overlap 1009374 GAATCAATCGCGTGA TGCCGACA GGGA TGTCGGCG TAGCTTTCGCGGGGC TERM 1165 1009540 - 1009561 + T 70 -8.1 -3.72576 | gap 1 GTCCTCCTTGCCCGT GT-GTGAGCT GGA AGCTCACGAC TTTGGTCAGGCGAAG Spea_0813 1011041 - 1009716 - | FAD dependent oxidoreductase Spea_0814 1012198 - 1011167 - | AraC family transcriptional regulator TERM 1166 1011478 - 1011500 + g 70 -4.8 -4.49906 | overlap 1011473 GGCTGATAGCTCGAC CAACGTGGCG ACT TGCTGTGTTG TTTATTTGAATATTG Spea_0815 1012326 - 1012940 + | lysine exporter protein LysE/YggA TERM 1167 1013115 - 1013098 - T 100 -11.3 -5.64421 | opp_overlap 1013098 ATGGTAAACAAAAAA GCCACTC AAAT GAGTGGC TTTTCAATGCTTAGA TERM 1168 1013098 - 1013115 + T 93 -11.3 -4.23892 | opp_overlap 1013098 ATGGTAAACAAAAAA GCCACTC AAAT GAGTGGC TTTTCAATGCTTAGA Spea_0816 1013813 - 1013154 - | ribose-5-phosphate isomerase A TERM 1169 1013773 - 1013789 + g 84 -5 -5.40004 | TCTACGTACTGAAGC GCAGCC CAACC GGCAGC TTTTTTCATTTCATC Spea_0817 1014119 - 1015063 + | hypothetical protein TERM 1170 1015174 - 1015139 - g 70 -4.8 -4.38129 | overlap 1015143 ATACAAGTACCAAAA CAAACAGGGTCAAACT AGCA AGCTTTAACCTGTTTA ATTACATTGAACCGC TERM 1171 1015170 - 1015143 - g 71 -3.4 -4.74518 | overlap 1015139 AAGTACCAAAACAAA CAGGGTCAAACT AGCA AGCTTTAACCTG TTTAATTACATTGAA TERM 1172 1016053 - 1016035 - g 86 -11.6 -3.54459 | opp_overlap 1016044 CGAATGCTTGCCAAA GCGCGGGC ATC GCGCGCGC CGACTCATTACTACG Spea_0818 1015117 - 1016256 + | endonuclease/exonuclease/phosphatase Spea_0819 1016761 - 1016282 - | MORN repeat-containing protein TERM 1173 1018217 - 1018199 - g 73 -8 -4.07568 | TTTGCTGCCCGAAAA GCGGCGGG CGA CCCAACGC TGACCGCAGATGAGC Spea_0820 1016981 - 1018750 + | alkaline phosphatase TERM 1174 1018797 - 1018825 + F 75 -10.5 -3.18264 | opp_overlap 1018809 TCTCTGGTCTATTTA TTTGGTTACTAAC TTG GTTATTAACCAAA TTAGTAACTAACAGG TERM 1175 1018861 - 1018885 + F 100 -10.8 -5.1861 | opp_overlap 1018859 1018864 GAGTGATTAATAACT TAAGGCTACC TTAGC GGTGGCCTTA TTTTTTAGTGATAGG Spea_0821 1019275 - 1019835 + | phosphoribosyltransferase TERM 1176 1019866 - 1019881 + T 100 -10.4 -5.79595 | opp_overlap 1019866 AATTCGCAGCTAAAA GCCACC GCAA GGTGGC TTTTTTGTTTTAAAA TERM 1177 1019881 - 1019866 - T 89 -10.4 -4.18762 | opp_overlap 1019866 AATTCGCAGCTAAAA GCCACC GCAA GGTGGC TTTTTTGTTTTAAAA TERM 1178 1019918 - 1019900 - T 78 -3 -5.40072 | opp_overlap 1019900, overlap 1019901 TTTGTTTTAAAAAAA GGGCCTAG GAC CTAGGACG CTCTGCTGCTAGAGC Spea_0822 1020428 - 1020216 - | hypothetical protein TERM 1179 1020652 - 1020692 + r 70 -8.3 -3.29511 | opp_overlap 1020659 1020666 1020673 TTGCTTTTTGCTTTT CCTAGAACCTAGAACCTAG AAC CTAGAATCTAGAATCTAGG TTCTAGGACGCTGCG TERM 1180 1020699 - 1020659 - R 100 -20.7 -3.28712 | opp_overlap 1020652, overlap 1020666 1020673 TTGCTTTTCCTAGAA CCTAGAACCTAGAACCTAG AAT CTAGAATCTAGGTTCTAGG ACGCTGCGCGGCTAG TERM 1181 1020699 - 1020666 - R 100 -15.5 -3.45054 | opp_overlap 1020652, overlap 1020659 1020673 TCCTAGAACCTAGAA CCTAGAACCTAGAAT CTAG AATCTAGGTTCTAGG ACGCTGCGCGGCTAG TERM 1182 1020699 - 1020673 - R 90 -12.4 -3.45321 | opp_overlap 1020652, overlap 1020659 1020666 ACCTAGAACCTAGAA CCTAGAATCTAG AAT CTAGGTTCTAGG ACGCTGCGCGGCTAG TERM 1183 1020816 - 1020834 + r 73 -8.8 -3.67498 | opp_overlap 1020805 1020812 1020816 AGAACCTAGAACCTA GGACCTAG AAC CTAGGACC TTCTCTTAAACCTTC Spea_0823 1023528 - 1020859 - | aminopeptidase N TERM 1184 1021268 - 1021281 + g 71 -3.7 -4.8667 | overlap 1021269 GGGAGAATGACCTCT GCGGC TAAT GCCGA TTTTTGTCCGCTATC TERM 1185 1023699 - 1023715 + r 100 -12.3 -5.4505 | opp_overlap 1023699 TTAGCCAATAAAAAA GCCAGCA ACT TGCTGGC TTTTTTATTGGAGGG TERM 1186 1023715 - 1023699 - R 100 -12.3 -5.4833 | opp_overlap 1023699 TTAGCCAATAAAAAA GCCAGCA ACT TGCTGGC TTTTTTATTGGAGGG Spea_0824 1024352 - 1023747 - | membrane lipoprotein lipid attachment site Spea_0825 1025731 - 1024364 - | TPR repeat-containing protein Spea_0826 1026218 - 1026006 - | SlyX family protein TERM 1187 1026644 - 1026632 - H 83 -6.3 -5.12987 | CTAAATAAAAATAAA GGTTA GTT TAACC ACGTGTAAATGCTGA Spea_0827 1026670 - 1027437 + | peptidylprolyl isomerase FKBP-type TERM 1188 1027494 - 1027528 + F 85 -12.3 -3.09635 | opp_overlap 1027503, overlap 1027503 GAAGAGAATTGATAG CTTAAAAAAGGACGC ATTCA GCGTCCTTTTTTGCG TTAGGTCATAAGCCT TERM 1189 1027519 - 1027503 - f 93 -9.4 -5.07567 | opp_overlap 1027494 1027503 TGATAGCTTAAAAAA GGACGC ATTCA GCGTCC TTTTTTGCGTTAGGT TERM 1190 1027503 - 1027519 + F 93 -9.4 -5.16572 | opp_overlap 1027503, overlap 1027494 TGATAGCTTAAAAAA GGACGC ATTCA GCGTCC TTTTTTGCGTTAGGT Spea_0828 1027702 - 1028073 + | hypothetical protein TERM 1191 1028112 - 1028140 + T 95 -13.3 -3.54543 | opp_overlap 1028119, overlap 1028119 TGTCCAAATAGGTAC AAAAAAAGCAGCC ATT GGCTGCTTTTTTG TTTGAAAAGGTGCGT TERM 1192 1028119 - 1028133 + T 100 -11.4 -5.63517 | opp_overlap 1028119, overlap 1028112 ATAGGTACAAAAAAA GCAGCC ATT GGCTGC TTTTTTGTTTGAAAA TERM 1193 1028133 - 1028119 - T 100 -11.4 -5.65177 | opp_overlap 1028112 1028119 ATAGGTACAAAAAAA GCAGCC ATT GGCTGC TTTTTTGTTTGAAAA Spea_0829 1028784 - 1028155 - | two component LuxR family transcriptional regulator Spea_0830 1030588 - 1028876 - | nitrate/nitrite sensor protein NarQ Spea_0831 1030831 - 1032234 + | cytochrome c nitrite reductase TERM 1194 1032266 - 1032281 + T 100 -10.4 -5.79595 | opp_overlap 1032266 TGTTTAATATTAAAA GCCCTC ATTA GAGGGC TTTTTTATTTTCAGC TERM 1195 1032281 - 1032266 - T 90 -10.4 -4.4261 | opp_overlap 1032266 TGTTTAATATTAAAA GCCCTC ATTA GAGGGC TTTTTTATTTTCAGC TERM 1196 1032714 - 1032739 + T 74 -6.1 -4.43012 | opp_overlap 1032706 1032716 1032717, overlap 1032709 1032716 1032717 TATAACAGATGGGCA AAGCCACCTTC TTTA GAAGGTGGATC TTTTACTGTTGCCAT TERM 1197 1032716 - 1032737 + T 77 -8.7 -3.81853 | opp_overlap 1032706 1032716 1032717, overlap 1032709 1032714 1032717 TAACAGATGGGCAAA GCCACCTTC TTTA GAAGGTGGA TCTTTTACTGTTGCC TERM 1198 1032737 - 1032716 - T 72 -8.7 -3.60948 | opp_overlap 1032709 1032716 1032714 1032717, overlap 1032706 1032717 TAACAGATGGGCAAA GCCACCTTC TTTA GAAGGTGGA TCTTTTACTGTTGCC TERM 1199 1032717 - 1032736 + T 81 -12.2 -2.88389 | opp_overlap 1032706 1032716 1032717, overlap 1032709 1032716 1032714 AACAGATGGGCAAAG CCACCTTC TTTA GAAGGTGG ATCTTTTACTGTTGC TERM 1200 1032736 - 1032717 - T 81 -12.2 -2.76087 | opp_overlap 1032709 1032717 1032716 1032714, overlap 1032706 1032716 AACAGATGGGCAAAG CCACCTTC TTTA GAAGGTGG ATCTTTTACTGTTGC Spea_0832 1033346 - 1032804 - | isochorismatase hydrolase TERM 1201 1033470 - 1033486 + H 75 -8 -4.04206 | opp_overlap 1033469 1033470, overlap 1033481 CAGGCGTTGAATAAT TGCACC TTGCT GGTGCA TTTATATGCACGTAA Spea_0833 1033605 - 1033943 + | nitrogen regulatory protein P-II Spea_0834 1033956 - 1035206 + | Rh family protein/ammonium transporter TERM 1202 1035301 - 1035322 + F 93 -12.3 -4.06055 | opp_overlap 1035295 1035301 AAAACAATAGATTAA GACCCCAGT GAAA GCTGGGGTC TTTGCTTTAAAAGCT TERM 1203 1035322 - 1035301 - f 88 -11.6 -3.44888 | opp_overlap 1035301, overlap 1035295 AAAACAATAGATTAA GACCCCAG TGAAAG CTGGGGTC TTTGCTTTAAAAGCT Spea_0835 1035491 - 1035826 + | hypothetical protein Spea_0836 1035910 - 1037121 + | TPR repeat-containing protein Spea_0837 1037516 - 1038571 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1204 1038622 - 1038595 - T 88 -11.4 -3.59935 | opp_overlap 1038601, overlap 1038601 TAATCAGTATAAATA GAAAAAGGAGGC ATTA GCCTCCTTTTTT GATCAAGTAATTTAA TERM 1205 1038616 - 1038601 - T 100 -10.4 -5.24799 | opp_overlap 1038601, overlap 1038595 GTATAAATAGAAAAA GGAGGC ATTA GCCTCC TTTTTTGATCAAGTA TERM 1206 1038601 - 1038616 + T 93 -10.4 -5.15634 | opp_overlap 1038595 1038601 GTATAAATAGAAAAA GGAGGC ATTA GCCTCC TTTTTTGATCAAGTA Spea_0838 1038764 - 1038648 - | hypothetical protein Spea_0839 1039157 - 1040929 + | ABC transporter related Spea_0840 1041058 - 1041321 + | hypothetical protein Spea_0841 1041497 - 1041366 - | hypothetical protein TERM 1207 1041520 - 1041531 + r 73 -7.2 -4.08557 | CAAGTGCTACAACTT GCCG ATAG CGGC TTATTGTTTGAAGAC Spea_0842 1042190 - 1041597 - | phosphoglycerate mutase Spea_0843 1042307 - 1043056 + | oxidoreductase FAD/NAD(P)-binding subunit Spea_0844 1043372 - 1044379 + | extracellular solute-binding protein TERM 1208 1044485 - 1044500 + F 90 -7.6 -5.18715 | opp_overlap 1044480 1044485 AAATATTTAAGTTAA CCTATC GTTA GATAGG TTTTCTTGTTTTTAT Spea_0845 1044554 - 1046185 + | binding-protein-dependent transport systems inner membrane component Spea_0846 1046187 - 1047215 + | ABC transporter related Spea_0847 1047424 - 1048359 + | Dyp-type peroxidase family protein TERM 1209 1048389 - 1048404 + T 91 -6.1 -5.45652 | opp_overlap 1048389 1048381 TGAACAATAAAAAAA CGCAC GTTAAG GTGCG TTTTTTATTGGGAGT TERM 1210 1048404 - 1048389 - T 100 -6.1 -5.95946 | opp_overlap 1048389, overlap 1048381 TGAACAATAAAAAAA CGCAC GTTAAG GTGCG TTTTTTATTGGGAGT Spea_0848 1048895 - 1048431 - | cupin 2 domain-containing protein TERM 1211 1049114 - 1049081 - R 86 -11.1 -3.87627 | opp_overlap 1049086, overlap 1049086 GGTGGAGATAAAAGA CAAAATGCCGTAGCC CTTG GGTTACGGCATTTTT GGTGCAGATAGTCCG TERM 1212 1049109 - 1049086 - R 93 -11 -4.95843 | opp_overlap 1049086, overlap 1049081 AGATAAAAGACAAAA TGCCGTAGCC CTTG GGTTACGGCA TTTTTGGTGCAGATA TERM 1213 1049086 - 1049109 + r 100 -13.2 -4.72986 | opp_overlap 1049086 1049081 AGATAAAAGACAAAA TGCCGTAGCC CTTG GGTTACGGCA TTTTTGGTGCAGATA Spea_0849 1049629 - 1049159 - | arginine repressor TERM 1214 1049760 - 1049777 + H 75 -5.7 -4.7629 | opp_overlap 1049759 1049763 ATGGTGTAACTTAAG TTAGAAT GATT ATTCTAA TTTTTAACTTGCTAA TERM 1215 1050854 - 1050834 - g 78 -12.7 -2.53263 | overlap 1050851 CTTACGGTGAAGTCA GTGCATTTG AAG CAAATGCAC GTGATGCGATGCTAG Spea_0850 1049981 - 1050916 + | malate dehydrogenase TERM 1216 1050938 - 1050955 + T 100 -12.7 -5.42514 | opp_overlap 1050938 AGCTGCAATTAAAAA GGGAGCC ACTA GGCTCCC TTTTTTGGTTTCTGA TERM 1217 1050955 - 1050938 - T 100 -12.7 -4.86621 | opp_overlap 1050938 AGCTGCAATTAAAAA GGGAGCC ACTA GGCTCCC TTTTTTGGTTTCTGA Spea_0851 1051956 - 1050985 - | polyprenyl synthetase TERM 1218 1051269 - 1051279 + g 74 -5.4 -4.57837 | TACCTTCGGCTAAGT CATC ACC GATG TTTTTGCCAAGCTCT TERM 1219 1051758 - 1051770 + g 71 -7.7 -3.97947 | opp_overlap 1051758 TGGCGGCCAATTTAA GGTGA GAA TCACC TTTATAGTCAATGGC Spea_0852 1052239 - 1052550 + | 50S ribosomal protein L21 Spea_0853 1052566 - 1052820 + | 50S ribosomal protein L27 TERM 1220 1052845 - 1052872 + F 90 -9.2 -5.055 | gap 1, opp_overlap 1052850, overlap 1052850 TAAGCTAATAATTAA TATAAGCCCCGCC ATT GGTGGGGCTT-TG TTTTTTCAAAATTAA TERM 1221 1052868 - 1052850 - f 90 -11.6 -3.79841 | opp_overlap 1052845 1052850 TAATAATTAATATAA GCCCCGCC ATT GGTGGGGC TTTGTTTTTTCAAAA TERM 1222 1052850 - 1052868 + F 100 -13.8 -5.04249 | opp_overlap 1052850, overlap 1052845 TAATAATTAATATAA GCCCCGCC ATT GGTGGGGC TTTGTTTTTTCAAAA Spea_0854 1052958 - 1054121 + | GTPase ObgE Spea_0855 1054151 - 1054909 + | hypothetical protein Spea_0856 1054909 - 1055382 + | hypothetical protein TERM 1223 1055920 - 1055892 - g 74 -5.4 -4.57569 | opp_overlap 1055902 GGATGTTGCTAAAAA TGACAAAGATGT TGAAT ACAGCTTTATCA AGTTGGTAAAAAAGT Spea_0857 1055458 - 1055940 + | dihydrofolate reductase Spea_0858 1056037 - 1056432 + | hypothetical protein TERM 1224 1056472 - 1056454 - T 85 -8.9 -4.21811 | opp_overlap 1056454 TAGTGAATATAGAAA TACTGGG CTTGC CCCAGTA TTTTTTTGTCTCTTG TERM 1225 1056454 - 1056472 + T 100 -8.9 -5.80248 | opp_overlap 1056454 TAGTGAATATAGAAA TACTGGG CTTGC CCCAGTA TTTTTTTGTCTCTTG TERM 1226 1056540 - 1056508 - T 85 -11.6 -3.35046 | gap 1, opp_overlap 1056508 1056516, overlap 1056510 1056516 CCAGTGCTTTAAATA TATAAAAAGGCGCTA GATA TAGCGCCTTTTT-TA TTTGTTTTCTCTGCT TERM 1227 1056508 - 1056540 + T 95 -11.6 -4.84146 | gap 1, opp_overlap 1056508 1056510 1056516, overlap 1056516 CCAGTGCTTTAAATA TATAAAAAGGCGCTA GATA TAGCGCCTTTTT-TA TTTGTTTTCTCTGCT TERM 1228 1056539 - 1056510 - T 85 -12.3 -3.24411 | opp_overlap 1056508 1056516, overlap 1056508 1056516 AGTGCTTTAAATATA TAAAAAGGCGCTA GATA TAGCGCCTTTTTT ATTTGTTTTCTCTGC TERM 1229 1056533 - 1056516 - T 95 -11.3 -5.14985 | opp_overlap 1056508 1056516, overlap 1056510 1056508 TTAAATATATAAAAA GGCGCTA GATA TAGCGCC TTTTTTATTTGTTTT TERM 1230 1056516 - 1056533 + T 100 -11.3 -5.88476 | opp_overlap 1056516 1056510 1056508, overlap 1056508 TTAAATATATAAAAA GGCGCTA GATA TAGCGCC TTTTTTATTTGTTTT Spea_0859 1058587 - 1056566 - | methyl-accepting chemotaxis sensory transducer Spea_0860 1059523 - 1058690 - | diadenosine tetraphosphatase Spea_0861 1059973 - 1059593 - | ApaG TERM 1231 1060081 - 1060095 + r 76 -7.1 -4.258 | opp_overlap 1060073 1060081 AAAGGTATAAAAAAA GGGCA GTTAA TGCCC TTTATTCATCAGTAG TERM 1232 1060095 - 1060081 - R 100 -7.1 -5.68039 | opp_overlap 1060081, overlap 1060073 AAAGGTATAAAAAAA GGGCA GTTAA TGCCC TTTATTCATCAGTAG Spea_0862 1060932 - 1060129 - | dimethyladenosine transferase TERM 1233 1060492 - 1060509 + g 78 -6.3 -4.58395 | gap 1, opp_overlap 1060492 1060494 GCCAGGTGAAGCAGA GAGG-CGT AGA ACGACCTC TTTTTGCAGCATAAA Spea_0863 1061932 - 1060949 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1234 1061799 - 1061782 - G 72 -6.3 -4.23794 | gap 1 GCAACTGAATAGAAA GC-CCAAG CTT CTTGGCGC GAGACAGTAATAATT TERM 1235 1061866 - 1061830 - G 100 -23.9 -3.99324 | opp_overlap 1061833, overlap 1061833 CTGGATCAGCACAAA CGACTAGCTCAGCAGGC CAA GCCTGCTGAGCTAGTTG TATCACTAAATCTGG TERM 1236 1061863 - 1061833 - G 100 -24.2 -3.04836 | opp_overlap 1061833, overlap 1061830 GATCAGCACAAACGA CTAGCTCAGCAGGC CAA GCCTGCTGAGCTAG TTGTATCACTAAATC TERM 1237 1061833 - 1061863 + g 100 -24.2 -3.524 | opp_overlap 1061833 1061830 GATCAGCACAAACGA CTAGCTCAGCAGGC CAA GCCTGCTGAGCTAG TTGTATCACTAAATC TERM 1238 1061909 - 1061889 - G 70 -9.6 -3.0264 | AAATCTGGGCCAACA CCCGCCGG TTCAC CCGGCGTG ATGGCTATGCGTTTA Spea_0864 1063242 - 1061938 - | SurA domain-containing protein TERM 1239 1062898 - 1062911 + g 79 -3.1 -5.32699 | AATTTGCGCTTTCAT TTGCG CGAC CGTAA TTTTTTGCTCTTTAG Spea_0865 1065694 - 1063370 - | organic solvent tolerance protein TERM 1240 1063889 - 1063920 + g 70 -8.8 -3.41024 | gap 1, overlap 1063895 AGAATAGAGTTGGGT CGTC-AATTCCGCGG CAA TCGCGGAGTTAGATG TGTTCTCTTGCACAA Spea_0866 1065844 - 1066890 + | aminoglycoside phosphotransferase Spea_0867 1066891 - 1067559 + | nucleotidyl transferase Spea_0868 1067559 - 1068338 + | Dna-J like membrane chaperone protein Spea_0869 1068393 - 1069004 + | hypothetical protein Spea_0870 1069095 - 1070048 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1241 1070140 - 1070094 - T 100 -11.9 -4.79683 | gap 1, opp_overlap 1070097, overlap 1070097 AAGGTATAAAACAAA TAAGCCTCAAATTTAACGCTAA ACCT TTAGCGA-AAATTTGAGGCTTT TTAATTAGCAGGTGT TERM 1242 1070137 - 1070097 - T 100 -13.6 -4.48317 | gap 1, opp_overlap 1070097, overlap 1070094 GTATAAAACAAATAA GCCTCAAATTTAACGCTAA ACCT TTAGCGA-AAATTTGAGGC TTTTTAATTAGCAGG TERM 1243 1070097 - 1070137 + T 100 -13.6 -4.8622 | gap 1, opp_overlap 1070097 1070094 GTATAAAACAAATAA GCCTCAAATTTAACGCTAA ACCT TTAGCGA-AAATTTGAGGC TTTTTAATTAGCAGG Spea_0871 1071335 - 1070160 - | phosphoribosylglycinamide formyltransferase 2 TERM 1244 1071410 - 1071433 + H 88 -3.9 -5.8096 | gap 1 AAGTTAGCAATGCAG TGAGGG-GCA CTTTT TGTACCCTCA TTTTTATTTTTTCTA Spea_0872 1071648 - 1072067 + | hypothetical protein Spea_0873 1072069 - 1073205 + | secretion protein HlyD family protein TERM 1245 1073264 - 1073279 + F 83 -6.1 -5.10933 | opp_overlap 1073264 TGCACTTGATATAAA GGGAC CTTAGC GTCCC TTTTCTTTTGGGTAA Spea_0874 1073338 - 1074813 + | ATPase central domain-containing protein Spea_0875 1075474 - 1074920 - | hypothetical protein Spea_0876 1075600 - 1075911 + | hypothetical protein Spea_0877 1077176 - 1075908 - | histidine kinase TERM 1246 1077058 - 1077074 + g 88 -8.7 -4.73388 | opp_overlap 1077058 GCTAAAGCGACTAAA GGTGCAT CGA GTGCACC TTTTTCGTCAACATT TERM 1247 1077177 - 1077167 - G 72 -3.2 -5.09204 | AGAGGCTAATAAAAA GACG TTT CATC TCTATGAATGCGCTG Spea_0878 1077908 - 1077195 - | two component transcriptional regulator Spea_0879 1078291 - 1077908 - | hypothetical protein TERM 1248 1078073 - 1078090 + g 89 -4.9 -5.66868 | gap 1 TAAAGAGTGAATATC TGGTG-AG GGA CTACACCA TTTTTTTAATTCATT Spea_0880 1079204 - 1078329 - | MltA-interacting MipA family protein Spea_0881 1079454 - 1079990 + | GCN5-related N-acetyltransferase Spea_0882 1080472 - 1079987 - | hypothetical protein TERM 1249 1080483 - 1080511 + H 70 -8.4 -3.39449 | gap 1, overlap 1080485 TTCATTGTTTCTCAT TATT-ACTCGCAA GGGC TTGCGAGTGAATA TTGGTGTTAGTGCGG TERM 1250 1080485 - 1080508 + H 72 -10.4 -2.55437 | overlap 1080483 CATTGTTTCTCATTA TTACTCGCAA GGGC TTGCGAGTGA ATATTGGTGTTAGTG Spea_0883 1080611 - 1080946 + | hypothetical protein Spea_0884 1081884 - 1081000 - | UspA domain-containing protein TERM 1251 1081367 - 1081355 - G 83 -9.1 -4.22554 | opp_overlap 1081355 TTATCTAACAAAGAA GCCAG CTG CTGGC TATCATCGAGTAAAC TERM 1252 1082623 - 1082657 + H 70 -3.5 -4.87008 | opp_overlap 1082608 1082639, overlap 1082619 1082624 GGCCAAGAGTGCGAG GCCGATCAGAAACGG ACAAG CCTTTTCTGCTTGGG TTTGTTTTCTATATT TERM 1253 1083053 - 1083065 + G 72 -4.8 -4.6856 | opp_overlap 1083041, overlap 1083041 GCACTCGATGTGAAT CAGC ATCAA GCTG TTTTTGCGGTGTTTA Spea_0885 1082858 - 1083610 + | short chain dehydrogenase Spea_0886 1084083 - 1083664 - | glyoxalase/bleomycin resistance protein/dioxygenase Spea_0887 1084735 - 1084127 - | NADPH-dependent FMN reductase Spea_0888 1084885 - 1085520 + | putative transcriptional regulator Spea_0889 1085524 - 1086228 + | pseudouridine synthase TERM 1254 1086372 - 1086343 - f 73 -8.7 -3.72576 | opp_overlap 1086342 TTTTGTGTTATTAAA CTTTCAGTTCTCA TGGT TGAAAACGGAAAG ATTGGCTCGATTGAG TERM 1255 1086527 - 1086544 + F 73 -5.5 -4.59982 | overlap 1086529 CAAATCTGTCAATTG GCGTGAC GTGT GTCACTC TTTGTTTGGTTGTGA Spea_0890 1086771 - 1087370 + | GPR1/FUN34/yaaH family protein TERM 1256 1087448 - 1087429 - T 100 -12.2 -5.86332 | opp_overlap 1087429 TGAAGCGAAAAAAAA GCTGACCT ACTA AGGTCAGC TTTTTTGTATCTGTA TERM 1257 1087429 - 1087448 + T 100 -12.2 -5.4492 | opp_overlap 1087429 TGAAGCGAAAAAAAA GCTGACCT ACTA AGGTCAGC TTTTTTGTATCTGTA Spea_0891 1089016 - 1087484 - | major facilitator transporter Spea_0892 1090268 - 1089579 - | LrgB family protein Spea_0893 1090750 - 1090265 - | LrgA family protein TERM 1258 1090524 - 1090513 - G 79 -2.2 -5.63103 | GTGGAATGAAAAAAA GCAA TAGA TCGC CAATCAGCCAACTGG Spea_0894 1090859 - 1091755 + | LysR family transcriptional regulator TERM 1259 1091846 - 1091868 + T 77 -4.9 -4.90778 | gap 1, opp_overlap 1091841 1091846, overlap 1091841 GATAAAAATACAAAA GCCTAGTTCT TCTG AGG-CTAGGC TTTTCTTTAGCTAGG TERM 1260 1091868 - 1091846 - T 70 -2.7 -5.02287 | gap 1, opp_overlap 1091846 1091841, overlap 1091841 GATAAAAATACAAAA GCCTAG-TTC TTCT GAGGCTAGGC TTTTCTTTAGCTAGG Spea_0895 1092050 - 1091886 - | hypothetical protein Spea_0896 1092786 - 1092187 - | AMMECR1 domain-containing protein Spea_0897 1093591 - 1092755 - | hypothetical protein TERM 1261 1093575 - 1093555 - GH 72 -8.9 -3.31905 | overlap 1093553 AGGCGGGATAGAAGA GGCCGGCAA CGG CTGCAGGCC GAACTGAAGCAAACA Spea_0898 1093665 - 1094774 + | radical SAM domain-containing protein TERM 1262 1094851 - 1094883 + T 100 -15.8 -4.81814 | opp_overlap 1094844 1094851 GCGATAAATTAATAA GCCACCTAATATCA TGGAT TGGTATTAGGTGGC TTTTCTTGTCGTGAT TERM 1263 1094883 - 1094851 - T 100 -13.6 -3.93401 | opp_overlap 1094851, overlap 1094844 GCGATAAATTAATAA GCCACCTAATATCA TGGAT TGGTATTAGGTGGC TTTTCTTGTCGTGAT Spea_0899 1097900 - 1094937 - | hypothetical protein TERM 1264 1098497 - 1098526 + G 77 -11.5 -3.14051 | gap 1, opp_overlap 1098500, overlap 1098495 1098499 CGGAGAGTCGATAGG C-AAGCTGCATGCC CAG GGCATGCAGCATAG TATTCGTGCGGGTAA TERM 1265 1098499 - 1098523 + G 87 -14.3 -2.77523 | opp_overlap 1098500, overlap 1098497 1098495 GAGAGTCGATAGGCA AGCTGCATGCC CAG GGCATGCAGCA TAGTATTCGTGCGGG TERM 1266 1098522 - 1098500 - g 100 -17.8 -3.13177 | opp_overlap 1098499 1098497 1098495 AGAGTCGATAGGCAA GCTGCATGCC CAG GGCATGCAGC ATAGTATTCGTGCGG TERM 1267 1099313 - 1099294 - g 71 -10 -3.14961 | opp_overlap 1099294 1099293, overlap 1099292 1099290 AGCAGCAGCAACAGA CGCAGCAA ATTG CTGCTGCG ATTCATCAATTTACC Spea_0900 1098306 - 1100027 + | methyl-accepting chemotaxis sensory transducer TERM 1268 1100062 - 1100080 + T 100 -14.6 -4.32177 | opp_overlap 1100062 TTCAGATAACAAAAA GGGCTGTC AGT GACAGCCC TTTATTATGAGCTAA TERM 1269 1100080 - 1100062 - T 100 -14.6 -5.24796 | opp_overlap 1100062 TTCAGATAACAAAAA GGGCTGTC AGT GACAGCCC TTTATTATGAGCTAA TERM 1270 1100091 - 1100115 + T 82 -8.6 -4.14511 | opp_overlap 1100096 AGCCCTTTATTATGA GCTAACTCCC GAGGA GGAAGTTAGC TTTTCGACTAAGGTT Spea_0901 1103052 - 1100137 - | valyl-tRNA synthetase Spea_0902 1103563 - 1103072 - | DNA polymerase III chi subunit HolC Spea_0903 1103801 - 1105090 + | DEAD/DEAH box helicase domain-containing protein Spea_0904 1105164 - 1106072 + | LysR family transcriptional regulator Spea_0905 1106602 - 1106069 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Spea_0906 1107230 - 1106694 - | hypothetical protein Spea_0907 1107696 - 1109018 + | hypothetical protein TERM 1271 1109034 - 1109067 + T 74 -5.3 -4.8143 | overlap 1109040 CGACAAGCTGTGTTT TGCGAAGGTGGGTCA AGCT TGACTCACCTTTATG TTTTTCACTTGTTAC TERM 1272 1109040 - 1109061 + T 91 -10.9 -4.56791 | overlap 1109034 GCTGTGTTTTGCGAA GGTGGGTCA AGCT TGACTCACC TTTATGTTTTTCACT Spea_0908 1110411 - 1109194 - | response regulator receiver modulated diguanylate phosphodiesterase Spea_0909 1114409 - 1110408 - | Hpt sensor hybrid histidine kinase TERM 1273 1111502 - 1111532 + g 87 -9.7 -4.33417 | gap 1, overlap 1111502 1111503 GTATGACCTGCAATT G-CGCCTTGGCAGC GTAT GCTGCGAGGGCGGC TTTATTGTCGATACA TERM 1274 1111502 - 1111531 + g 71 -9.9 -3.19568 | overlap 1111502 1111503 GTATGACCTGCAATT GCGCCTTGGCAGC GTAT GCTGCGAGGGCGG CTTTATTGTCGATAC TERM 1275 1111503 - 1111530 + g 80 -13.4 -2.51259 | overlap 1111502 1111502 TATGACCTGCAATTG CGCCTTGGCAGC GTAT GCTGCGAGGGCG GCTTTATTGTCGATA TERM 1276 1113025 - 1113037 + g 79 -7.7 -4.41348 | opp_overlap 1113025 TTATTAACACCAAAA CTCAC CGG GTGAG TTTGTTTACCCAAAG TERM 1277 1113037 - 1113025 - G 79 -7.7 -4.44797 | opp_overlap 1113025 TTATTAACACCAAAA CTCAC CGG GTGAG TTTGTTTACCCAAAG TERM 1278 1114447 - 1114457 + r 73 -5.4 -4.57073 | opp_overlap 1114447 GACAGTAATTAATTA GCAT GAG ATGC TTTTTGCACAGGCTG TERM 1279 1114757 - 1114790 + r 79 -9 -3.86015 | gap 1, opp_overlap 1114757 GCAGGAAATAAAAAA GGCTAAACCAC-GCT ATATA ATCAGTGGTTTAGCC TTTATGCGCCAGCTA TERM 1280 1114790 - 1114757 - R 100 -9 -5.68438 | gap 1, opp_overlap 1114757 GCAGGAAATAAAAAA GGCTAAACCAC-GCT ATATA ATCAGTGGTTTAGCC TTTATGCGCCAGCTA TERM 1281 1114806 - 1114831 + r 73 -7.8 -3.9279 | TTTATGCGCCAGCTA GCTAATATTA ACTCTC TAATATTAGC TTTCTAGCATTAACT Spea_0910 1116377 - 1114869 - | leucyl aminopeptidase TERM 1282 1116536 - 1116524 - H 74 -6.3 -4.36914 | overlap 1116533 TTGTTGGTGACAAAA CTACT AAA AGTAG ACAGTCTACATGAAA TERM 1283 1116545 - 1116533 - H 74 -6.3 -4.43571 | overlap 1116524 ACAAAACTACTAAAA GTAGA CAG TCTAC ATGAAAGTTGTATTG Spea_0911 1116601 - 1117716 + | permease YjgP/YjgQ family protein Spea_0912 1117713 - 1118771 + | permease YjgP/YjgQ family protein TERM 1284 1118793 - 1118848 + T 100 -15.9 -3.4376 | gap 2, opp_overlap 1118807, overlap 1118807 1118846 TTTAAGCGCTATACC GCAGCCATAAAAAAGCCAATCAACAGA GGAA TCTGT-GATTGGCTTTTTTGTTGC-GC TTATACTAAGTGTAT TERM 1285 1118835 - 1118807 - T 100 -11.2 -5.28176 | gap 1, opp_overlap 1118807 1118793 CGCAGCCATAAAAAA GCCAATCAACAGA GGAA TCTGT-GATTGGC TTTTTTGTTGCGCTT TERM 1286 1118807 - 1118835 + T 100 -11.2 -5.4756 | gap 1, opp_overlap 1118807, overlap 1118793 CGCAGCCATAAAAAA GCCAATCAACAGA GGAA TCTGT-GATTGGC TTTTTTGTTGCGCTT Spea_0913 1119403 - 1118879 - | RDD domain-containing protein Spea_0914 1119714 - 1119460 - | hypothetical protein Spea_0915 1120239 - 1119760 - | GCN5-related N-acetyltransferase Spea_0916 1121802 - 1120318 - | carboxypeptidase Taq TERM 1287 1121290 - 1121280 - G 74 -5.4 -4.59853 | TTAAGTTGCCAAAAA TCTG CTC CAGA CTCGCCGTAGTCATG TERM 1288 1122429 - 1122414 - g 79 -3.2 -5.39755 | GATAATGATAAAAAA GGGATT ATAA AAGCCC TAGCTAAAAAAGTGG Spea_0917 1122306 - 1124132 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 1289 1124157 - 1124186 + T 95 -13.7 -3.54414 | opp_overlap 1124163, overlap 1124163 TCAGTTAAACTAGAG CAAAAAGGCCTGC ATCA GCAGGCCTTTTTA TGTTTGATTGACACT TERM 1290 1124180 - 1124163 - T 100 -12.7 -4.85177 | opp_overlap 1124157 1124163 AAACTAGAGCAAAAA GGCCTGC ATCA GCAGGCC TTTTTATGTTTGATT TERM 1291 1124163 - 1124180 + T 100 -12.7 -5.23644 | opp_overlap 1124163, overlap 1124157 AAACTAGAGCAAAAA GGCCTGC ATCA GCAGGCC TTTTTATGTTTGATT Spea_0918 1124855 - 1124217 - | hypothetical protein TERM 1292 1125009 - 1125038 + r 100 -14.5 -3.91032 | opp_overlap 1125016, overlap 1125016 GTTTATCATTGTGAT TAAAAAAGGCACC AAAT GGTGCCTTTTTTG TTTATAAAATAATTC TERM 1293 1125031 - 1125016 - R 93 -10.4 -5.14965 | opp_overlap 1125009 1125016 ATTGTGATTAAAAAA GGCACC AAAT GGTGCC TTTTTTGTTTATAAA TERM 1294 1125016 - 1125031 + r 100 -10.4 -5.72622 | opp_overlap 1125016, overlap 1125009 ATTGTGATTAAAAAA GGCACC AAAT GGTGCC TTTTTTGTTTATAAA Spea_0919 1126368 - 1125070 - | DEAD/DEAH box helicase domain-containing protein TERM 1295 1126549 - 1126534 - R 85 -6.8 -5.08601 | overlap 1126536 TTACGGCAATAAAAA CAGCGC CGAA GCGCTA ATACCATTCACTTAA TERM 1296 1126547 - 1126536 - R 76 -7.2 -4.16909 | overlap 1126534 ACGGCAATAAAAACA GCGC CGAA GCGC TAATACCATTCACTT TERM 1297 1126659 - 1126686 + r 100 -9.2 -6.15536 | opp_overlap 1126662 1126665, overlap 1126662 TATCGCTTTTAAAGC AAAGAACCCAGT TGGT GCTGGGTTCTTA TTTTTTTTGTTGATT TERM 1298 1126683 - 1126662 - R 86 -10.2 -4.05788 | opp_overlap 1126659 1126662, overlap 1126665 CGCTTTTAAAGCAAA GAACCCAG TTGGTG CTGGGTTC TTATTTTTTTTGTTG TERM 1299 1126662 - 1126683 + r 93 -10.9 -5.08831 | opp_overlap 1126662 1126665, overlap 1126659 CGCTTTTAAAGCAAA GAACCCAGT TGGT GCTGGGTTC TTATTTTTTTTGTTG TERM 1300 1126680 - 1126665 - R 71 -6.1 -4.15396 | opp_overlap 1126662 1126659, overlap 1126662 TTTTAAAGCAAAGAA CCCAG TTGGTG CTGGG TTCTTATTTTTTTTG Spea_0920 1128544 - 1126757 - | peptidase M24 Spea_0921 1128794 - 1129981 + | major facilitator transporter Spea_0922 1130192 - 1131409 + | peptidase M24 TERM 1301 1131623 - 1131646 + T 100 -12.5 -4.91852 | opp_overlap 1131623 AATGCCAAACAAAAA GCCCGAATG CTTAAC CATTCGGGC TTTCTTTTTAATCAG TERM 1302 1131646 - 1131623 - T 100 -12.5 -5.29846 | opp_overlap 1131623 AATGCCAAACAAAAA GCCCGAATG CTTAAC CATTCGGGC TTTCTTTTTAATCAG Spea_0923 1132145 - 1131675 - | peptidylprolyl isomerase FKBP-type TERM 1303 1133084 - 1133064 - g 79 -3.2 -5.40072 | overlap 1133065 CTTCGGTCAAAAAAA GCCTGCAA GTGTA TCGCAGGT AAAGGAAAAGCCGAT TERM 1304 1133438 - 1133421 - g 80 -6.3 -4.8622 | CCCGGTAATGAAAAA CGATACT TCTG AGCATCG CCATGAAAACCGCCG Spea_0924 1132435 - 1133505 + | OmpA/MotB domain-containing protein TERM 1305 1133557 - 1133587 + G 71 -9.8 -3.13504 | overlap 1133556 1133555 TGTTATTCACATTGC TCGTTATCGCTG GTTGTGG CGGCGATGACGA TGGTTTTCCTACGGG Spea_0925 1133508 - 1134908 + | Ig domain-containing protein Spea_0926 1134971 - 1136320 + | Ig domain-containing protein TERM 1306 1136380 - 1136360 - T 89 -5.4 -5.37593 | opp_overlap 1136352 1136348 1136360, overlap 1136353 1136352 GTTTAAACGAAAAAA GCAGCC GCTAATTTG GGCTGC TTTTTTTATTTGCTT TERM 1307 1136360 - 1136380 + T 100 -5.4 -6.01187 | opp_overlap 1136360 1136353 1136352, overlap 1136352 1136348 GTTTAAACGAAAAAA GCAGCC GCTAATTTG GGCTGC TTTTTTTATTTGCTT Spea_0927 1137012 - 1136395 - | cold-shock DNA-binding domain-containing protein Spea_0928 1137356 - 1137057 - | ArsR family transcriptional regulator TERM 1308 1137443 - 1137409 - R 70 -5.8 -4.36063 | opp_overlap 1137412, overlap 1137411 1137412 ATAATAGCAGGAAAA CACTGACCGACAAA CGATAAT TTTGTCGGCCATTA TTGTGCTCGTTTCTA TERM 1309 1137440 - 1137412 - R 71 -9.7 -2.85364 | opp_overlap 1137412, overlap 1137411 1137409 ATAGCAGGAAAACAC TGACCGACAAA CGATAAT TTTGTCGGCCA TTATTGTGCTCGTTT TERM 1310 1137412 - 1137440 + r 71 -7.5 -3.87538 | opp_overlap 1137412 1137411 1137409 ATAGCAGGAAAACAC TGACCGACAAA CGATAAT TTTGTCGGCCA TTATTGTGCTCGTTT Spea_0929 1137956 - 1137456 - | hypothetical protein TERM 1311 1138981 - 1139000 + G 80 -6.4 -4.75472 | opp_overlap 1138975, overlap 1138975 1138975 1138973 GCTAATGTATGCGGT TACCGCCA TGTT TGCCGGTA TTTTATTAGTATGGG Spea_0930 1138130 - 1139047 + | hypothetical protein TERM 1312 1139077 - 1139094 + T 100 -11.3 -5.55698 | opp_overlap 1139077 ACAGATCTATCGAAA GCCAGCT TATT AGCTGGC TTTTTTTGGGTTGTA TERM 1313 1139094 - 1139077 - T 88 -11.3 -3.6806 | opp_overlap 1139077 ACAGATCTATCGAAA GCCAGCT TATT AGCTGGC TTTTTTTGGGTTGTA TERM 1314 1139145 - 1139121 - T 70 -8.6 -3.34895 | TGTAGCGGGAAGTAA GCAGGGCTAT TGAGC ATAGACCTGC AAAGCGTTGCTAGTG Spea_0931 1139514 - 1139170 - | hypothetical protein TERM 1315 1139595 - 1139580 - H 73 -6.8 -4.29845 | CAAGCTAATTTAAAA GTGCGC CACA GCACAC AATCGCGAGATTTAT Spea_0932 1139689 - 1139871 + | hypothetical protein TERM 1316 1139930 - 1139905 - T 90 -10.5 -4.44277 | opp_overlap 1139911, overlap 1139911 GAGCAAAACCTAAAA GAAAAACCGCC TTTC GGCGGTTTTTT ATTGGGGGAAACTGT TERM 1317 1139911 - 1139924 + T 100 -9.5 -5.4505 | opp_overlap 1139905 1139911 AACCTAAAAGAAAAA CCGCC TTTC GGCGG TTTTTTATTGGGGGA TERM 1318 1139924 - 1139911 - T 100 -9.5 -5.49568 | opp_overlap 1139911, overlap 1139905 AACCTAAAAGAAAAA CCGCC TTTC GGCGG TTTTTTATTGGGGGA Spea_0933 1140732 - 1139998 - | hypothetical protein Spea_0934 1141272 - 1140886 - | protein of unknown function DUF861 cupin_3 TERM 1319 1141330 - 1141313 - R 100 -10.5 -5.38497 | opp_overlap 1141312 1141314 AGCTAAACCAAAAAA GCGCGGC CTAA GCCACGC CTCGTTATTGTTACT Spea_0935 1142846 - 1141341 - | methylmalonate-semialdehyde dehydrogenase TERM 1320 1141375 - 1141387 + g 70 -9.1 -3.454 | overlap 1141374 ACAAACTCGGCCTTG GTGCC AGC GGCAC TCTTGTTAGTCGATT TERM 1321 1141647 - 1141665 + g 75 -9.6 -3.63744 | overlap 1141646 ATGATCGTTTATTAG TTGCAGCG CTT CGCTGTAA TCTTTTACGCGCACG TERM 1322 1142677 - 1142693 + g 91 -6.5 -5.49809 | overlap 1142679 AGCGGCGTGACTTTA GACCATG ACT CATGGGC TTTTTTTGCAATTTC Spea_0936 1144301 - 1142961 - | beta alanine--pyruvate transaminase TERM 1323 1145451 - 1145435 - g 80 -5.7 -5.07567 | opp_overlap 1145443 CCAGATCTGAAAAAA GCAGCCG AGG CAGCAGC CTGTGCGATTGCCTT TERM 1324 1145928 - 1145910 - g 77 -11 -3.27051 | overlap 1145908 ATAAAGCTCACAAGA CCGCGAAG GCA CTTCGCAG CGGCATGGTGTGGAT Spea_0937 1144577 - 1146076 + | aldehyde dehydrogenase TERM 1325 1146143 - 1146166 + F 100 -11 -5.4505 | ATTACGGTACTTTAA GCCCCTGAGT GCAA ACTTGGGGGC TTTTTTATTGGGCCG TERM 1326 1147361 - 1147388 + G 75 -11.4 -3.06261 | CGTATCGATGAGTTA GCGCCTTTGA TGCCGAAC TCAAAGGCGC TGTTAGACGTTAACA Spea_0938 1146278 - 1147474 + | MerR family transcriptional regulator Spea_0939 1147510 - 1148046 + | GCN5-related N-acetyltransferase Spea_0940 1148172 - 1148729 + | putative adenylyl cyclase CyaB Spea_0941 1148796 - 1149488 + | aspartate racemase Spea_0942 1150956 - 1149649 - | FAD dependent oxidoreductase TERM 1327 1151131 - 1151113 - H 70 -5.9 -4.4078 | CGCTGTTAATCAAAA TCGGCTC TAGTC GTGCCGA GGACTCCTTGTATGA Spea_0943 1151198 - 1151746 + | XRE family transcriptional regulator TERM 1328 1152029 - 1152009 - f 71 -6.1 -4.20368 | opp_overlap 1152027 GCATTTTAACATAAA GCGATACAA ACC TTGTTCCGC GTAACTCGTTGATAT TERM 1329 1152790 - 1152814 + G 77 -11.4 -3.17075 | opp_overlap 1152796 GTGAACTCTGTCCAT ACCCAAGGCG TAGAC CGCCTTGGGG TTGGGTTGCGGCCAG Spea_0944 1152244 - 1153005 + | peptidase C26 Spea_0945 1153008 - 1154357 + | glutamate--putrescine ligase TERM 1330 1155419 - 1155435 + G 70 -9.5 -3.08867 | opp_overlap 1155400 ATCCCTAAAGAGGGC TCAAACC TTT GGTTTGA TATGTTAGCCATTCC Spea_0946 1154615 - 1155715 + | extracellular solute-binding protein TERM 1331 1155744 - 1155724 - f 70 -8.3 -3.34404 | opp_overlap 1155724, overlap 1155722 CTACTAAGTAGAATA GGGCAAG GTATCGT CTTGCCC TTTTTGATCGGAAAG TERM 1332 1155724 - 1155744 + F 93 -9.7 -4.72272 | opp_overlap 1155724 1155722 CTACTAAGTAGAATA GGGCAAGGT ATC GTCTTGCCC TTTTTGATCGGAAAG TERM 1333 1156030 - 1156042 + G 72 -5.5 -4.37763 | CAGGATTTGAAAAGC CGTCT GAG GGACG TATTTTTTTAGATGG Spea_0947 1155816 - 1156952 + | spermidine/putrescine ABC transporter ATPase subunit Spea_0948 1156963 - 1157868 + | binding-protein-dependent transport systems inner membrane component TERM 1334 1158380 - 1158392 + G 72 -9.1 -3.59247 | AGCGGCTCAGGATCT TGGCG CGA CGCCA TTTAAAACCTTCTTC Spea_0949 1157865 - 1158680 + | ornithine carbamoyltransferase TERM 1335 1158697 - 1158732 + F 100 -16.3 -3.17685 | CTCATCAGTGTCATT CGGGTATGAAAGGGC TATTGC GCGCTTTCATACCCG TTAGCTCTATCGTTA Spea_0950 1158843 - 1160165 + | FAD dependent oxidoreductase TERM 1336 1160568 - 1160589 + G 71 -7.9 -3.91434 | opp_overlap 1160566 1160567 AGCGGAAGCCAAAGG CGAAGTCGC CTAT GCGGCGTCG TTTATCGAGTGGTTT Spea_0951 1160248 - 1161696 + | succinic semialdehyde dehydrogenase Spea_0952 1161738 - 1163015 + | 4-aminobutyrate aminotransferase TERM 1337 1163067 - 1163090 + T 82 -3.9 -5.37593 | opp_overlap 1163067 TAGGTAATACAGAAA TCCGAGA GCTGTTTTTG TCTCGGA TTTTTTACTTTCCAA Spea_0953 1163556 - 1163125 - | UspA domain-containing protein TERM 1338 1163494 - 1163474 - G 71 -3.4 -4.87786 | gap 1, opp_overlap 1163474, overlap 1163477 CCAACGTTATAAAAA TTA-GCCAT CTCA ATGGCATAA CTTATAGCGTGTGAT TERM 1339 1163689 - 1163713 + H 82 -10.7 -3.55714 | opp_overlap 1163690 1163691, overlap 1163690 ATTCGTTAGATAAAA ATCGCCACAAC TTT GTTGTGGCGGC TTCTGTGGTCAGTAT TERM 1340 1163712 - 1163690 - H 100 -12 -4.96848 | opp_overlap 1163690 1163689, overlap 1163691 TTCGTTAGATAAAAA TCGCCACAAC TTT GTTGTGGCGG CTTCTGTGGTCAGTA TERM 1341 1163690 - 1163712 + H 93 -14.2 -2.72947 | opp_overlap 1163690 1163691, overlap 1163689 TTCGTTAGATAAAAA TCGCCACAAC TTT GTTGTGGCGG CTTCTGTGGTCAGTA TERM 1342 1163711 - 1163691 - H 100 -15.5 -3.57627 | opp_overlap 1163690 1163689, overlap 1163690 TCGTTAGATAAAAAT CGCCACAAC TTT GTTGTGGCG GCTTCTGTGGTCAGT TERM 1343 1164526 - 1164536 + G 74 -6.8 -4.25104 | AAGGCAGCGTACTAG TGGC TTG GCCA TTTTGATGCAGCAAC Spea_0954 1164302 - 1164634 + | hypothetical protein Spea_0955 1164638 - 1166044 + | cytochrome c oxidase, cbb3-type, subunit I Spea_0956 1166037 - 1166651 + | cytochrome C oxidase mono-heme subunit/FixO TERM 1344 1166786 - 1166768 - g 89 -6.7 -5.35224 | opp_overlap 1166768 1166775, overlap 1166769 CCGATAAAAATAAAA CCATCGA TACCT TCGACGG TATTGATGAGAATGA TERM 1345 1168655 - 1168667 + G 70 -4.9 -4.40804 | CCGACACTGAGCTGG CTAAT CTT ATTAG TTTTGTACGCTACTA Spea_0957 1166653 - 1168824 + | gluconate 2-dehydrogenase (acceptor) TERM 1346 1168931 - 1168908 - T 100 -14 -4.86133 | opp_overlap 1168908 TACAGACATGAAAAA GCCGCTTAAA TTTC TTTAAGCGGC TTATCAAAATTGGTG TERM 1347 1168908 - 1168931 + T 95 -14 -3.33737 | opp_overlap 1168908 TACAGACATGAAAAA GCCGCTTAAA TTTC TTTAAGCGGC TTATCAAAATTGGTG TERM 1348 1169176 - 1169191 + T 90 -10.4 -4.3851 | opp_overlap 1169176 TTTGAGCAAAAAAAA GCTGCC CTTA GGCAGC TTTCTGTTTGATATC TERM 1349 1169191 - 1169176 - T 100 -10.4 -5.86061 | opp_overlap 1169176 TTTGAGCAAAAAAAA GCTGCC CTTA GGCAGC TTTCTGTTTGATATC Spea_0958 1171089 - 1169239 - | RNA polymerase, sigma 70 subunit, RpoD TERM 1350 1169883 - 1169902 + g 72 -5 -4.59773 | TTAGATCCAAGAACT GTAGACCA CGGT TGGTGTAC TTTTTAGCGATAGAG TERM 1351 1170108 - 1170084 - G 71 -10.1 -3.20164 | opp_overlap 1170083 GTACATCGAACTCAA CCATTTGTAGA CCT TCTACATATGG CTTGCCTGATGCAAG TERM 1352 1170852 - 1170871 + g 70 -10 -3.03441 | overlap 1170854 1170867 CAGCGGCTTCTTCTG CAGCATCG TCAT CGGTGCTG TCTTCAGACATCATG Spea_0959 1172937 - 1171207 - | DNA primase TERM 1353 1171963 - 1171973 + g 74 -8.2 -3.99324 | opp_overlap 1171963 ACCAGGCTTTAATAA CGGC AGG GCCG TTTCTAGTGCTCGCC TERM 1354 1172476 - 1172493 + g 72 -5.6 -4.37886 | AGCAAAACCGATATT GAAGTG TTCAAC CACTTC TTTTGTAAGGCCTCG TERM 1355 1173054 - 1173031 - R 88 -8.8 -4.66535 | opp_overlap 1173031 1173034, overlap 1173034 AACTTCGAAAACAAA CAAGCCGCGC AGAA GCACGGCTCA TTCATGCAATAAAAC TERM 1356 1173051 - 1173034 - R 90 -10.5 -4.43397 | opp_overlap 1173031 1173034, overlap 1173031 TTCGAAAACAAACAA GCCGCGC AGAA GCACGGC TCATTCATGCAATAA Spea_0960 1173518 - 1173075 - | GatB/YqeY domain-containing protein TERM 1357 1173536 - 1173550 + r 75 -7.8 -4.07568 | opp_overlap 1173536 TGAGATTAGTATAAA CGTACG CGA CGTGCG TTTTCGCGAGAAAGC Spea_0961 1173741 - 1173526 - | 30S ribosomal protein S21 TERM 1358 1173706 - 1173689 - G 75 -9.9 -3.55548 | opp_overlap 1173687 1173705, overlap 1173680 CAAGAGCGCTTGAAA CGACGTA GAGC TACGTCG AATGGTTCGTTTTCA TERM 1359 1174054 - 1174035 - g 74 -3.4 -4.93296 | opp_overlap 1174035 1174044, overlap 1174037 TTATGATGATAAAAA GGGCTTGC TGTC GCATGCGC TTTACAGTCAGGTTA TERM 1360 1174962 - 1174942 - g 70 -5.3 -4.4078 | overlap 1174944 GGCTTGGAAGTAAAA GGGCAGCCA AGA TGGCCACTC GATACGCTAGAGCCT Spea_0962 1173970 - 1174986 + | metalloendopeptidase glycoprotease family TERM 1361 1175009 - 1175027 + T 100 -16 -5.72622 | opp_overlap 1175009 AATTCGATACGAAAA CGGCGCTC ATT GAGCGCCG TTTTTTATTTCTCAA TERM 1362 1175027 - 1175009 - T 100 -16 -4.35518 | opp_overlap 1175009 AATTCGATACGAAAA CGGCGCTC ATT GAGCGCCG TTTTTTATTTCTCAA Spea_0963 1175735 - 1175061 - | 2OG-Fe(II) oxygenase TERM 1363 1175815 - 1175831 + r 76 -7.3 -4.15044 | opp_overlap 1175827 CCAGTCAAAAATCGG CGCAATT ATA AGTTGCG TTTGTTAAAAAGCAA TERM 1364 1175894 - 1175914 + r 85 -8.5 -4.37092 | opp_overlap 1175894 GCCATTGTGCAAAAA TTAATTCTT GCT AAGAATTAA TTTTATAAAAGAGGT TERM 1365 1175914 - 1175894 - R 87 -8.5 -4.58395 | opp_overlap 1175894 GCCATTGTGCAAAAA TTAATTCTT GCT AAGAATTAA TTTTATAAAAGAGGT Spea_0964 1176572 - 1176000 - | putative glycerol-3-phosphate acyltransferase PlsY Spea_0965 1176911 - 1177264 + | dihydroneopterin aldolase Spea_0966 1177265 - 1177756 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Spea_0967 1177781 - 1178581 + | undecaprenyl pyrophosphate phosphatase Spea_0968 1178635 - 1179468 + | rRNA (guanine-N(1)-)-methyltransferase Spea_0969 1179521 - 1180432 + | ErfK/YbiS/YcfS/YnhG family protein TERM 1366 1180476 - 1180490 + T 100 -9.2 -5.62045 | opp_overlap 1180475 1180476 TGAAATAGATTAAAG GCGTCC ATT GGGCGC TTTTTTATTATCTAT TERM 1367 1180583 - 1180551 - T 74 -6.5 -4.32046 | gap 2, opp_overlap 1180551, overlap 1180546 1180577 GGCGGAAAAATTAAA GGCTTGG--TCAAGT GCAAT ACTTGAAACCAAGCC TTTGGAGTTAACCTA Spea_0970 1180895 - 1180629 - | major outer membrane lipoprotein, putative Spea_0971 1182350 - 1181112 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase TERM 1368 1182726 - 1182704 - H 71 -4 -4.94222 | opp_overlap 1182706, overlap 1182705 1182706 AATAATGCATAAAAA GTCCAGCAAG TGA CTCGCTGGTT CATCATGGTTTTAAA TERM 1369 1182724 - 1182706 - H 76 -11 -2.71859 | opp_overlap 1182706, overlap 1182705 1182704 TAATGCATAAAAAGT CCAGCAAG TGA CTCGCTGG TTCATCATGGTTTTA TERM 1370 1182706 - 1182724 + H 70 -8.8 -3.27544 | opp_overlap 1182706 1182705 1182704 TAATGCATAAAAAGT CCAGCAAG TGA CTCGCTGG TTCATCATGGTTTTA TERM 1371 1184207 - 1184192 - g 70 -4.7 -4.44448 | ATCAGCCTAAAGAAA TTGGC CAGTCT GCCAA TCAGGCGCAGATCCA Spea_0972 1182757 - 1184433 + | peptidoglycan binding domain-containing protein Spea_0973 1184433 - 1185509 + | general secretion pathway protein B TERM 1372 1185536 - 1185553 + T 100 -9.9 -5.28176 | opp_overlap 1185536 TTACAAATGAAAAAA GGAACAC CTAG GTGTTCC TTTTTTGTCGATAGC TERM 1373 1185553 - 1185536 - T 100 -9.9 -5.42514 | opp_overlap 1185536 TTACAAATGAAAAAA GGAACAC CTAG GTGTTCC TTTTTTGTCGATAGC Spea_0974 1186894 - 1185605 - | glutamate-1-semialdehyde-2,1-aminomutase Spea_0975 1187941 - 1186922 - | aspartate carbamoyltransferase Spea_0976 1188205 - 1189020 + | prolipoprotein diacylglyceryl transferase TERM 1374 1189028 - 1189015 - T 79 -5.3 -5.04249 | opp_overlap 1189015 TTGCGAAAAAACAAA GCTTA ATAC TAAGC TGCTTTAGGCAAAAA TERM 1375 1189071 - 1189047 - T 100 -16.5 -5.81412 | opp_overlap 1189047 TTTAGGCAAAAAAAA GCCGTTAGCGT GTT ACGCCAACGGC TTTTTTATTGGTTAG TERM 1376 1189047 - 1189071 + T 100 -14.3 -5.5604 | opp_overlap 1189047 TTTAGGCAAAAAAAA GCCGTTAGCGT GTT ACGCCAACGGC TTTTTTATTGGTTAG Spea_0977 1191285 - 1189129 - | TonB-dependent receptor TERM 1377 1190499 - 1190521 + g 74 -7 -4.30441 | TTTCTTTATCGCCTT TAACGGCCAT GTA GTCGCCGTTA TTTTCCATATTGTAG TERM 1378 1191631 - 1191606 - R 90 -9.8 -4.32436 | gap 1, opp_overlap 1191600 1191599 ATATCATGACTAAAA GGCGC-TTCTC TTATC GAGAATGCGCC TACTAGCTGTTTAGG Spea_0978 1192713 - 1191649 - | uncharacterized FlgJ-related protein-like protein TERM 1379 1192921 - 1192947 + r 89 -9.5 -4.29326 | opp_overlap 1192921 TGCAGGCAATAAAAA GCCCAAATAAC TCGGT GTTACTTGGGC TTTGTTGCCTTTAAG TERM 1380 1192947 - 1192921 - R 100 -11.7 -5.10461 | opp_overlap 1192921 TGCAGGCAATAAAAA GCCCAAATAAC TCGGT GTTACTTGGGC TTTGTTGCCTTTAAG Spea_0979 1193495 - 1193085 - | cytochrome c class I Spea_0980 1193886 - 1193497 - | hypothetical protein Spea_0981 1195112 - 1193886 - | oxidoreductase molybdopterin binding Spea_0982 1195432 - 1195112 - | cytochrome c class I Spea_0983 1197795 - 1196074 - | chloride channel core TERM 1381 1196971 - 1196956 - G 72 -10.4 -2.85407 | opp_overlap 1196967, overlap 1196955 CAGACGATTAATAAG CGGCCA TTTT TGGCCG ATGGCAGTAATTTTT TERM 1382 1197221 - 1197210 - G 73 -2.2 -5.19879 | overlap 1197211 CTTCAAATACAAAAA TCAC GGCA GCGA GTGGCGCGTTAAAAA TERM 1383 1197257 - 1197237 - G 93 -9.7 -4.56597 | opp_overlap 1197222, overlap 1197239 GTGGCGCGTTAAAAA TCGCCGCTA TTC CAGCGGCAA TACCACTGGCACACA Spea_0984 1197857 - 1198660 + | hypothetical protein TERM 1384 1198738 - 1198720 - g 74 -3.8 -5.0925 | overlap 1198721 CTTCAAAAGTAAAAA CCTTGCTC GAA GAGGAAGA AAATGACGCACTTAA Spea_0985 1198653 - 1199003 + | iron-sulfur cluster insertion protein ErpA TERM 1385 1199054 - 1199025 - T 83 -12.3 -2.56124 | opp_overlap 1199025 1199032, overlap 1199032 TTGAGTTAAATAGAG TAAAAAAGCCGTC GAAT GACGGCTTTTTTG TGTCTGTTCATTCAA TERM 1386 1199025 - 1199054 + T 95 -14.5 -3.15147 | opp_overlap 1199025 1199032, overlap 1199032 TTGAGTTAAATAGAG TAAAAAAGCCGTC GAAT GACGGCTTTTTTG TGTCTGTTCATTCAA TERM 1387 1199032 - 1199047 + T 100 -10.4 -5.46276 | opp_overlap 1199025 1199032, overlap 1199025 AAATAGAGTAAAAAA GCCGTC GAAT GACGGC TTTTTTGTGTCTGTT TERM 1388 1199047 - 1199032 - T 100 -10.4 -5.28755 | opp_overlap 1199032 1199025, overlap 1199025 AAATAGAGTAAAAAA GCCGTC GAAT GACGGC TTTTTTGTGTCTGTT Spea_0986 1199471 - 1199079 - | hypothetical protein TERM 1389 1199693 - 1199654 - R 77 -6.4 -4.57755 | opp_overlap 1199656, overlap 1199661 AGTTAGCAGATAAAA GCTAGAACATGGTAAGCC GTGA GGCTTACCATGGTAAATC ATCTAAGCAATTAGT TERM 1390 1199686 - 1199661 - R 100 -16.3 -3.54903 | opp_overlap 1199656, overlap 1199654 AGATAAAAGCTAGAA CATGGTAAGCC GTGA GGCTTACCATG GTAAATCATCTAAGC Spea_0987 1200084 - 1199704 - | hypothetical protein TERM 1391 1200204 - 1200185 - R 93 -9.3 -5.34655 | opp_overlap 1200185 CAATGAAAAAGAAAA CAGAGCC GCTTTA GGCTCTG TTTATCTATATAGAC TERM 1392 1200185 - 1200204 + r 85 -9.3 -4.17296 | opp_overlap 1200185 CAATGAAAAAGAAAA CAGAGCC GCTTTA GGCTCTG TTTATCTATATAGAC Spea_0988 1200917 - 1200210 - | aquaporin Z Spea_0989 1202495 - 1201053 - | alkaline phosphatase Spea_0990 1205031 - 1202509 - | peptidase S9 prolyl oligopeptidase TERM 1393 1202998 - 1202968 - G 74 -8.3 -3.96148 | gap 1 GTTTGCCACCATAAA GGCGCCG-TAGGAG TGGC CTCCTATCGCCACC CGTTCCCTATCGGCC TERM 1394 1203146 - 1203179 + g 73 -7.5 -4.08823 | gap 1, opp_overlap 1203158, overlap 1203177 AAAATTGCATACCCC TTAGCGGCAAATG-CC ACC GGACCTTTGGCGCTAA TTTGATTATATTGAT TERM 1395 1203624 - 1203614 - G 71 -6.8 -4.18934 | opp_overlap 1203613 1203614 GATGACTTTAAGAAA GGCT GAT AGCC CTTTGGCGATGCACC TERM 1396 1204461 - 1204495 + g 83 -10.1 -4.10925 | gap 1, overlap 1204458 TTTGCGACATGCTCT CGACAGCGAGGTTAGT GAAC ACTC-CCTTGCTGTCG TTTTGCCAGATATAT TERM 1397 1204858 - 1204897 + g 93 -6.7 -5.80003 | opp_overlap 1204857 1204867, overlap 1204861 CCTTGGGGTTAATAC CGCTAACCACT-GCTTATC TTGG GATAAGCGAGTGCTTA-CG TTTTTTGTTTGTTCG TERM 1398 1205091 - 1205067 - R 100 -12.9 -4.65895 | overlap 1205070 GTGGTTATTTAAAAA TAAGCGCCCAT CAG ATGGGCGCTTG AGAACTCGTTATTAA TERM 1399 1205088 - 1205070 - R 100 -14.6 -4.44608 | overlap 1205067 GTTATTTAAAAATAA GCGCCCAT CAG ATGGGCGC TTGAGAACTCGTTAT Spea_0991 1207901 - 1205124 - | TonB-dependent receptor TERM 1400 1206575 - 1206585 + g 74 -5.4 -4.71222 | overlap 1206572 GCGCATCGGCGCTCA CCAT GTG ATGG TTTTGCTTTTCGTAT Spea_0992 1208255 - 1210402 + | winged helix family two component response transcriptional regulator TERM 1401 1210623 - 1210593 - T 72 -9.9 -3.06737 | opp_overlap 1210590 1210587 GATTAAGTCGCAAGA TTAGCCAGTACTA TCGAT TATTACTGGCTAA TGATGATTAATCCGC Spea_0993 1211739 - 1210630 - | anhydro-N-acetylmuramic acid kinase TERM 1402 1210761 - 1210810 + g 72 -9.3 -3.55447 | gap 1, overlap 1210800 CTTCTACCCATTGTG GATCCATGCCAAGCTCTGAGGTGG TCA CCACCTTGTAGTTAGGCA-GGAGC TTATGTAATCGGTGC Spea_0994 1213211 - 1211799 - | peptidase M23B TERM 1403 1211861 - 1211876 + g 85 -5.4 -5.33405 | opp_overlap 1211861 TCATAGTTTCACTAA GCTTAG CAAA CTGAGC TTTTTCTTTGCTCGC TERM 1404 1213970 - 1213947 - g 76 -8.2 -4.19238 | gap 1, opp_overlap 1213947, overlap 1213963 TCGTGAACTGCAAAA GTCTGCTGGCC AGA AGCCA-CAGAC TGTGATCATGATGCC Spea_0995 1213339 - 1214535 + | tyrosyl-tRNA synthetase TERM 1405 1214632 - 1214655 + T 93 -11 -4.74103 | opp_overlap 1214632 TGGTTATTCGAACAA CGGTCTGTAC CAAA GTGCAGGCCG TTTTTACATTGCCAA Spea_0996 1215023 - 1214613 - | hypothetical protein Spea_0997 1215721 - 1215242 - | hypothetical protein Spea_0998 1216344 - 1215721 - | hypothetical protein Spea_0999 1216730 - 1216341 - | hypothetical protein Spea_1000 1217867 - 1216887 - | cobalamin biosynthesis protein CbiB TERM 1406 1217643 - 1217613 - G 87 -11.3 -3.83675 | gap 1 TAATTCAACCAAGAA GCTAATCACCGCCC AGAA GGG-GATGATTAGC AGCATCATGGCTAAG Spea_1001 1218646 - 1217954 - | adenosylhomocysteine nucleosidase TERM 1407 1218312 - 1218293 - G 76 -7.8 -4.2461 | opp_overlap 1218293 AGCGTCAGGAATAAA TGCCGCAG GCTG CTGCGCCA TTTGGCCGATTTCAT TERM 1408 1219191 - 1219160 - g 71 -9.6 -3.2056 | gap 1, opp_overlap 1219159 1219158 1219167 1219171, overlap 1219163 1219167 ATGCATACCCATGAA GTACTAATCGAGTCG GAA CGACT-GATTAGTGC GGTTATCGACGCTGA TERM 1409 1219385 - 1219375 - g 82 -6.8 -4.7497 | opp_overlap 1219375 1219376, overlap 1219376 CTTATTGAGCAAAAA GCTC GCC GAGC TAGATTTAACGATTA Spea_1002 1219028 - 1220359 + | diguanylate cyclase TERM 1410 1220651 - 1220675 + G 70 -2.2 -5.08824 | gap 1, opp_overlap 1220651 1220655, overlap 1220655 TAGCTCATGCTGAAA TCAAGTCGATG CGCA CATCCACT-GA TTTTTTACGTCAGGG Spea_1003 1220434 - 1220889 + | GCN5-related N-acetyltransferase Spea_1004 1221375 - 1220902 - | MarR family transcriptional regulator TERM 1411 1221506 - 1221475 - R 100 -13.1 -4.36914 | opp_overlap 1221453 1221474 GCTGCGCTTACAAAA GCGCGGTACAACG CTTGAT CGTTATACCGCAC AATTTATATAAGGCG Spea_1005 1222272 - 1221568 - | hypothetical protein Spea_1006 1223509 - 1222292 - | putative transporter, BCCT family protein Spea_1007 1225539 - 1223842 - | choline dehydrogenase Spea_1008 1227012 - 1225549 - | betaine aldehyde dehydrogenase TERM 1412 1226161 - 1226151 - G 73 -4.6 -4.82901 | opp_overlap 1226151 CTTGTTGCACAAAAA CACG GGT CGCG TTAGTGCAGATCTCG Spea_1009 1227608 - 1227003 - | transcriptional regulator BetI TERM 1413 1227770 - 1227753 - H 73 -7 -4.18762 | opp_overlap 1227752 1227753, overlap 1227740 1227736 AAGCTTTATTGAAAA GCGTGA CTCACC TCACGC ATTTATTTTGGCGAA Spea_1010 1228104 - 1229078 + | inosine/uridine-preferring nucleoside hydrolase TERM 1414 1229105 - 1229122 + T 89 -9.9 -4.25283 | opp_overlap 1229120, overlap 1229097 TAACATGGGTAGGTT GCCTCAT TATA ATGAGGC TTTTACTAAGCCGGT TERM 1415 1229124 - 1229162 + T 70 -3.1 -5.00136 | opp_overlap 1229120 1229132, overlap 1229125 1229129 1229132 CATTATAATGAGGCT TTTACTAAGCCGGTAGG AACTC CCTACTGGCCTATTACG TTTTGTGTTTTATTT TERM 1416 1229129 - 1229157 + T 77 -9.6 -3.46285 | opp_overlap 1229120 1229132, overlap 1229125 1229124 1229132 TAATGAGGCTTTTAC TAAGCCGGTAGG AACTC CCTACTGGCCTA TTACGTTTTGTGTTT TERM 1417 1229154 - 1229132 - T 73 -9.8 -3.14564 | opp_overlap 1229129 1229125 1229124 1229132, overlap 1229120 TGAGGCTTTTACTAA GCCGGTAGGA ACT CCCTACTGGC CTATTACGTTTTGTG TERM 1418 1229132 - 1229154 + T 79 -11.3 -2.55657 | opp_overlap 1229120 1229132, overlap 1229129 1229125 1229124 TGAGGCTTTTACTAA GCCGGTAGG AACTC CCTACTGGC CTATTACGTTTTGTG Spea_1011 1230527 - 1229331 - | ribokinase-like domain-containing protein TERM 1419 1230666 - 1230676 + r 74 -4 -5.02074 | TATCGAAAAGTGAAC TACT CAG AGTA TTTTTTGCAAACTAA TERM 1420 1230904 - 1230886 - R 100 -11.6 -5.80248 | overlap 1230887 TAACAGACAAAAAAA GGCGCCCC ATT GGGGCGCG CAAACACAAGCAACT TERM 1421 1230903 - 1230887 - R 100 -15.1 -4.05708 | overlap 1230886 AACAGACAAAAAAAG GCGCCCC ATT GGGGCGC GCAAACACAAGCAAC Spea_1012 1232353 - 1230944 - | glutamate synthase subunit beta TERM 1422 1232284 - 1232302 + g 77 -8.8 -3.9642 | overlap 1232278 CAATAAATTGTGTGG CACGCTGT CTG GCGGCGTG TTTAGTTGGGTCTTT Spea_1013 1236808 - 1232360 - | glutamate synthase subunit alpha TERM 1423 1235629 - 1235641 + g 78 -6.2 -4.66609 | CCAGTAGTTCTCCTG GGCC TACAC GGCC TTTTTCAATCACCTC TERM 1424 1236870 - 1236859 - H 70 -3 -5.13137 | GAAATAAAGCAAAAA TATC TATA GATA TGCACCCGAATCAAT Spea_1014 1237298 - 1238227 + | putative radical SAM protein Spea_1015 1238430 - 1238795 + | Hpt protein TERM 1425 1238818 - 1238846 + F 100 -12.5 -5.60993 | opp_overlap 1238818 1238820 GACTCTGGTATTTAA TAGCGCAGTTTGG GAA CTACACTGCGCTA TTTTTTTATCCAAAA TERM 1426 1238846 - 1238818 - f 75 -10.3 -3.05596 | opp_overlap 1238818, overlap 1238820 GACTCTGGTATTTAA TAGCGCAGTTTGG GAA CTACACTGCGCTA TTTTTTTATCCAAAA Spea_1016 1238980 - 1239915 + | LysR family transcriptional regulator TERM 1427 1240329 - 1240351 + T 100 -11.3 -5.42131 | opp_overlap 1240329 GACGGTTTTTATTAA GCCAGTTGG AACTC CCGACTGGC TTTTTTATGTACTTC TERM 1428 1240351 - 1240329 - T 73 -9.8 -3.14344 | opp_overlap 1240329 GACGGTTTTTATTAA GCCAGTTGGA ACT CCCGACTGGC TTTTTTATGTACTTC Spea_1017 1241053 - 1240325 - | integrase catalytic region TERM 1429 1241170 - 1241203 + r 80 -2.4 -5.64274 | overlap 1241171 ACTTTATGGTGCCTT TTACTTTGGCGAAC CAGAGC GTTCGGCTAAGTAC TTTTTTTCTAAATCG Spea_1018 1241553 - 1241170 - | transposase TERM 1430 1241635 - 1241605 - R 100 -10.7 -5.23292 | gap 1, opp_overlap 1241606 1241612, overlap 1241612 GGACATAAAATAAAA CAAAAAAGCCGATA TGAT TATCGGC-TTTTTG TTTATATGTTTTAGG TERM 1431 1241606 - 1241635 + r 91 -10.9 -4.33956 | opp_overlap 1241605 1241612, overlap 1241612 GACATAAAATAAAAC AAAAAAGCCGATA TGAT TATCGGCTTTTTG TTTATATGTTTTAGG TERM 1432 1241612 - 1241629 + r 100 -9.9 -5.4433 | opp_overlap 1241612 1241605, overlap 1241606 AAATAAAACAAAAAA GCCGATA TGAT TATCGGC TTTTTGTTTATATGT TERM 1433 1241629 - 1241612 - R 100 -9.9 -5.95449 | opp_overlap 1241606 1241612, overlap 1241605 AAATAAAACAAAAAA GCCGATA TGAT TATCGGC TTTTTGTTTATATGT Spea_1019 1242719 - 1241646 - | putative adenylate/guanylate cyclase Spea_1020 1243516 - 1242845 - | DNA mismatch repair protein TERM 1434 1244038 - 1244071 + H 89 -11.9 -3.7282 | gap 1, opp_overlap 1244042 1244044 1244046, overlap 1244041 TAATCGAGTTTCCAA CAGA-GATATCCACAG TTT CTGTGGATATCATCAG TTATTAATCGGCTGC TERM 1435 1244041 - 1244067 + H 83 -12.4 -2.67428 | opp_overlap 1244042 1244044 1244046, overlap 1244038 TCGAGTTTCCAACAG AGATATCCACAG TTT CTGTGGATATCA TCAGTTATTAATCGG TERM 1436 1244066 - 1244042 - H 100 -15.9 -3.07344 | opp_overlap 1244041 1244038, overlap 1244044 1244046 CGAGTTTCCAACAGA GATATCCACAG TTT CTGTGGATATC ATCAGTTATTAATCG TERM 1437 1244064 - 1244044 - H 84 -12.7 -3.09452 | opp_overlap 1244041 1244038, overlap 1244042 1244046 AGTTTCCAACAGAGA TATCCACAG TTT CTGTGGATA TCATCAGTTATTAAT TERM 1438 1244062 - 1244046 - H 79 -10.9 -3.10493 | opp_overlap 1244041 1244038, overlap 1244044 1244042 TTTCCAACAGAGATA TCCACAG TTT CTGTGGA TATCATCAGTTATTA Spea_1021 1244208 - 1244729 + | dinucleoside polyphosphate hydrolase TERM 1439 1244887 - 1244856 - g 73 -10.4 -3.10715 | gap 1, opp_overlap 1244855 1244854, overlap 1244880 GCTATGATGACCGAA TGTTGCTCTATCTAC ATT ATAGA-AGAGCAACA CCTTGTTCTCTCAGC Spea_1022 1244748 - 1246982 + | phosphoenolpyruvate-protein phosphotransferase PtsP Spea_1023 1247057 - 1247857 + | hypothetical protein TERM 1440 1248079 - 1248066 - g 76 -5.3 -4.84359 | TCATGTGGATAAAAA TGAGT TTCC ACTCA TCACCACCCGTAAGA Spea_1024 1247941 - 1248792 + | thymidylate synthase TERM 1441 1248817 - 1248846 + F 100 -16.7 -2.71246 | opp_overlap 1248824, overlap 1248824 CTCTAAAATAAGCTT TAAAAAACTCGCC TAAT GGCGAGTTTTTTA TCAATTTAGTTAAAT TERM 1442 1248839 - 1248824 - f 93 -10.4 -5.06103 | opp_overlap 1248824 1248817 ATAAGCTTTAAAAAA CTCGCC TAAT GGCGAG TTTTTTATCAATTTA TERM 1443 1248824 - 1248839 + F 100 -10.4 -5.33866 | opp_overlap 1248824, overlap 1248817 ATAAGCTTTAAAAAA CTCGCC TAAT GGCGAG TTTTTTATCAATTTA TERM 1444 1249106 - 1249091 - f 70 -2.6 -5.055 | gap 1, opp_overlap 1249091 CTAAGTGCTAAAAAA GTG-TGA TCC TCAGCAC TTTATTGTTACTGTT Spea_1025 1249284 - 1250459 + | Na+/H+ antiporter NhaA Spea_1026 1250456 - 1250839 + | hypothetical protein TERM 1445 1250879 - 1250855 - f 73 -8.6 -3.65514 | opp_overlap 1250856, overlap 1250851 1250856 1250858 GTTAAACTAAATTAA CGAGGCAACT GAATA AGTTGCCTCT TTTTTATTTATATAA TERM 1446 1250878 - 1250856 - f 81 -12.1 -2.78586 | opp_overlap 1250856, overlap 1250855 1250851 1250858 TTAAACTAAATTAAC GAGGCAACT GAATA AGTTGCCTC TTTTTTATTTATATA TERM 1447 1250856 - 1250878 + F 100 -12.1 -5.76237 | opp_overlap 1250855 1250851 1250856 1250858 TTAAACTAAATTAAC GAGGCAACT GAATA AGTTGCCTC TTTTTTATTTATATA Spea_1027 1250909 - 1251817 + | transcriptional activator NhaR Spea_1028 1251978 - 1252217 + | hypothetical protein TERM 1448 1252239 - 1252261 + G 93 -12 -3.70081 | TCTGATTTCTTCCAA CGGTCAGCGA CTC TCTCTGACCG TTATTGCCCTTATCT TERM 1449 1252395 - 1252407 + G 79 -9.1 -4.05446 | opp_overlap 1252392 1252395 TTATCGATTAAAGCA CTGGC GAT GCCAG TTTGTACTTAAGGCA Spea_1029 1252198 - 1252614 + | hypothetical protein Spea_1030 1254282 - 1252672 - | L-aspartate oxidase Spea_1031 1254502 - 1255080 + | RNA polymerase sigma factor RpoE Spea_1032 1255104 - 1255709 + | anti sigma-E protein, RseA TERM 1450 1256319 - 1256334 + G 70 -9 -3.33525 | opp_overlap 1256311 1256319 1256318 1256321, overlap 1256318 AAAGAAGCCTACAAG CAGGAG TGGC CTCCTG TCTTGTCTCAATCAG Spea_1033 1255722 - 1256654 + | sigma E regulatory protein, MucB/RseB Spea_1034 1256668 - 1257132 + | positive regulator of sigma E, RseC/MucC Spea_1035 1257261 - 1259051 + | GTP-binding protein LepA TERM 1451 1259091 - 1259109 + F 100 -16 -3.95852 | opp_overlap 1259079 1259077 ATATCGCTAGACTGA GCGCCGCA ATT TGCGGCGC TTTCATTACTGGCGT TERM 1452 1259256 - 1259266 + G 80 -5.4 -5.03314 | GTTTAGTGTGGATGG CAGA CGC TCTG TTTTTTGCACCTAAG TERM 1453 1259893 - 1259881 - g 71 -3.4 -4.79352 | opp_overlap 1259886 TTACCGACAAGAAAA TGTC CCTCT GACA GAGTTTGTTGTACCA Spea_1036 1259192 - 1260109 + | signal peptidase I TERM 1454 1260610 - 1260583 - g 71 -3.5 -4.81752 | opp_overlap 1260586, overlap 1260585 1260588 AAAAAGATCCAAAAA CATTACTGCAA GAGTAT TTGCAGAAATA TAGAAAACCACTGCC Spea_1037 1260111 - 1260788 + | ribonuclease III TERM 1455 1261674 - 1261691 + G 72 -4.9 -4.65078 | opp_overlap 1261687, overlap 1261675 GCGTCGATATGGAAG TCTTGTT TGAT AACAAGG TTTTCTTGGAGATGT Spea_1038 1260785 - 1261777 + | GTP-binding protein Era TERM 1456 1261803 - 1261830 + F 93 -10 -4.82901 | opp_overlap 1261803 1261801 CTTGATAGCGAAACA TGCCTCTTTTTA GTGA TAAGAAGGGGCA TTTTTATAGCCAGCA Spea_1039 1261937 - 1262626 + | DNA repair protein RecO TERM 1457 1262627 - 1262615 - f 71 -6.3 -4.15044 | TTGTTCGCTAAGAAA CCTAA ACC TTAGG CCGCAACAGGTTAAA Spea_1040 1262750 - 1263487 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 1458 1263512 - 1263532 + F 90 -8.3 -5.01553 | opp_overlap 1263512 AGCGTTGTTATTGAA GCCGAGA CTGATGC TCTCGGC TTTTATTTATCCCTT Spea_1041 1263587 - 1263982 + | holo-acyl-carrier-protein synthase Spea_1042 1264484 - 1263996 - | GCN5-related N-acetyltransferase Spea_1043 1265855 - 1264914 - | Dyp-type peroxidase family protein Spea_1044 1266453 - 1267511 + | hypothetical protein TERM 1459 1267794 - 1267746 - f 71 -6.3 -4.25347 | opp_overlap 1267755 1267759 1267768, overlap 1267747 1267751 1267755 1267759 AATTACGAACAGAAA GTTAACTAAGTGACTTAACTAAG TGA CTTAACTAAGTGACTTAACTAAG TGTATATAGTGAGCG TERM 1460 1267793 - 1267747 - f 73 -9.8 -3.14124 | opp_overlap 1267755 1267759 1267768, overlap 1267746 1267751 1267755 1267759 ATTACGAACAGAAAG TTAACTAAGTGACTTAACTAAG TGA CTTAACTAAGTGACTTAACTAA GTGTATATAGTGAGC TERM 1461 1267789 - 1267751 - f 70 -8.4 -3.37881 | opp_overlap 1267755 1267759 1267768, overlap 1267747 1267746 1267755 1267759 CGAACAGAAAGTTAA CTAAGTGACTTAACTAAG TGA CTTAACTAAGTGACTTAA CTAAGTGTATATAGT Spea_1045 1267843 - 1268376 + | hypothetical protein TERM 1462 1268384 - 1268437 + T 95 -11.3 -4.90266 | opp_overlap 1268389 1268394 1268404, overlap 1268394 1268404 1268429 AGAAGTAGCCTAAGC ATAAATTAAACATCAAAAAAGCGCT AATT AGCGCTTTTTTGATGTTTAAAAAAG TTTTTAATTGATCGC TERM 1463 1268432 - 1268389 - T 100 -24.4 -4.0616 | opp_overlap 1268384 1268394 1268404 1268429, overlap 1268394 1268404 TAGCCTAAGCATAAA TTAAACATCAAAAAAGCGCT AATT AGCGCTTTTTTGATGTTTAA AAAAGTTTTTAATTG TERM 1464 1268394 - 1268427 + T 100 -19.9 -3.5771 | opp_overlap 1268389 1268394 1268404, overlap 1268384 1268404 TAAGCATAAATTAAA CATCAAAAAAGCGCT AATT AGCGCTTTTTTGATG TTTAAAAAAGTTTTT TERM 1465 1268427 - 1268394 - T 100 -19.9 -4.17789 | opp_overlap 1268394 1268384 1268404, overlap 1268389 1268404 TAAGCATAAATTAAA CATCAAAAAAGCGCT AATT AGCGCTTTTTTGATG TTTAAAAAAGTTTTT TERM 1466 1268404 - 1268417 + T 91 -8.1 -5.32699 | opp_overlap 1268394 1268389 1268404, overlap 1268394 1268384 TTAAACATCAAAAAA GCGCT AATT AGCGC TTTTTTGATGTTTAA TERM 1467 1268417 - 1268404 - T 91 -8.1 -5.32699 | opp_overlap 1268404 1268394 1268384, overlap 1268394 1268389 TTAAACATCAAAAAA GCGCT AATT AGCGC TTTTTTGATGTTTAA Spea_1046 1269756 - 1268473 - | hypothetical protein TERM 1468 1269142 - 1269156 + g 78 -6.4 -4.60041 | ACGCGGGATCATGAT GTCATC TAC GGTGAC TTTTTCAAGGTCCAT Spea_1047 1270690 - 1269902 - | cytochrome c assembly protein TERM 1469 1270564 - 1270546 - G 72 -10.3 -2.87881 | TAATGGCTTGAGAGA GTGCTGC TGCGT GCAGCAC GACACCTATCGCAGC TERM 1470 1271192 - 1271175 - g 72 -4.9 -4.72029 | gap 1 CTTAACGGAAGAAAA CGTTAAGG AAA CCTTA-CG CGAAGTCCGCATGGC TERM 1471 1272138 - 1272126 - g 74 -3.4 -5.01811 | GCAGCAAATGAAAAA CATG GGCGG CATG ATGAACATGATTGAA TERM 1472 1272454 - 1272416 - g 86 -4.5 -5.52384 | overlap 1272419 GCGGCATGAAAAAAA TGATGCGTGGCATGAGC GGTAT GCTCCCACCAGGCATGA AAATGCCCGGCCGCT Spea_1048 1271098 - 1272471 + | signal recognition particle protein TERM 1473 1272496 - 1272538 + F 93 -11.4 -4.2349 | opp_overlap 1272499 1272503, overlap 1272503 ATATTCTGCAAAGCT AAATTTACAGACCAGAGTGA ATC TCACTCTGGTCTGTTGATCG TTTTAGGTGTAAAAA TERM 1474 1272535 - 1272499 - f 100 -15.3 -3.84451 | opp_overlap 1272496 1272503, overlap 1272503 TTCTGCAAAGCTAAA TTTACAGACCAGAGTGA ATC TCACTCTGGTCTGTTGA TCGTTTTAGGTGTAA TERM 1475 1272503 - 1272531 + F 100 -20.5 -3.37935 | opp_overlap 1272499 1272503, overlap 1272496 GCAAAGCTAAATTTA CAGACCAGAGTGA ATC TCACTCTGGTCTG TTGATCGTTTTAGGT TERM 1476 1272531 - 1272503 - f 100 -20.5 -2.69528 | opp_overlap 1272503 1272496, overlap 1272499 GCAAAGCTAAATTTA CAGACCAGAGTGA ATC TCACTCTGGTCTG TTGATCGTTTTAGGT TERM 1477 1272578 - 1272555 - f 70 -3 -5.03314 | TTTAGGTGTAAAAAA CGCCGATTAC GGTT GCATTCGTCG GTCAGTCAGGTAAAA TERM 1478 1272707 - 1272681 - f 73 -10.2 -2.88212 | opp_overlap 1272686, overlap 1272686 AATCATTAGAGGATA CCAAACGCATGG TTA CCATTCGTTTAG CTCGTGGCGGCGCAA Spea_1049 1272689 - 1272940 + | 30S ribosomal protein S16 Spea_1050 1272961 - 1273491 + | 16S rRNA-processing protein Spea_1051 1273507 - 1274253 + | tRNA (guanine-N(1)-)-methyltransferase Spea_1052 1274290 - 1274643 + | 50S ribosomal protein L19 TERM 1479 1274679 - 1274707 + F 82 -11.8 -3.06796 | opp_overlap 1274686, overlap 1274686 GATGCAGTGTTCGCA CGAGAAACCGCC TATAT GGCGGTTTTTTG TTGGCTAAAATAGAA TERM 1480 1274700 - 1274686 - f 77 -8.5 -3.96148 | opp_overlap 1274686 1274679 TGTTCGCACGAGAAA CCGCC TATAT GGCGG TTTTTTGTTGGCTAA TERM 1481 1274686 - 1274700 + F 95 -8.5 -5.4833 | opp_overlap 1274686, overlap 1274679 TGTTCGCACGAGAAA CCGCC TATAT GGCGG TTTTTTGTTGGCTAA Spea_1053 1275021 - 1276112 + | phospho-2-dehydro-3-deoxyheptonate aldolase Spea_1054 1276112 - 1277266 + | bifunctional chorismate mutase/prephenate dehydrogenase TERM 1482 1277331 - 1277344 + F 100 -9.5 -5.56264 | opp_overlap 1277331 ACTGATCTGACAAAA GGCGC TTAG GCGCC TTTTTTGTGTTTGGC TERM 1483 1277344 - 1277331 - f 90 -9.5 -4.40358 | opp_overlap 1277331 ACTGATCTGACAAAA GGCGC TTAG GCGCC TTTTTTGTGTTTGGC Spea_1055 1277672 - 1279336 + | hydroxylamine reductase TERM 1484 1279389 - 1279370 - f 89 -10 -4.17448 | opp_overlap 1279370 TAACTAAATCATAAA TGGCCACC AATT AGTGGCCA TTTTTTAGTTTTAAA TERM 1485 1279370 - 1279389 + F 95 -9.3 -5.46698 | opp_overlap 1279370 TAACTAAATCATAAA TGGCCAC CAATTA GTGGCCA TTTTTTAGTTTTAAA Spea_1056 1279439 - 1280563 + | oxidoreductase FAD-binding subunit TERM 1486 1280659 - 1280686 + F 84 -7 -4.84017 | gap 1, opp_overlap 1280659 GAACGTAAGGTTAAA GACAGGCCGCGAT GGA AATGCG-CCTGTC TTTTTATACCAAGTT Spea_1057 1280747 - 1281085 + | hypothetical protein TERM 1487 1282413 - 1282385 - g 79 -7.4 -4.4715 | opp_overlap 1282384 1282378 1282385, overlap 1282389 GCTTAATCGATAAAA GTAACGCTGAGC ATGCA GCTCAGCGTAAA CCTTAATCTGTACTA TERM 1488 1282409 - 1282389 - g 93 -12.6 -3.76789 | opp_overlap 1282385 1282384 1282378, overlap 1282385 AATCGATAAAAGTAA CGCTGAGC ATGCA GCTCAGCG TAAACCTTAATCTGT Spea_1058 1281133 - 1282419 + | sodium/hydrogen exchanger Spea_1059 1284470 - 1282497 - | chorismate mutase TERM 1489 1284540 - 1284571 + r 81 -5.8 -5.05577 | opp_overlap 1284547, overlap 1284547 TTATCTTTGCTGATA TAAAAAAGCCTCCC ATGT GGGAGGCTTTGGAA TTTTTACTTTCGTTT TERM 1490 1284547 - 1284564 + r 93 -12.7 -3.81062 | opp_overlap 1284547, overlap 1284540 TGCTGATATAAAAAA GCCTCCC ATGT GGGAGGC TTTGGAATTTTTACT TERM 1491 1284564 - 1284547 - R 100 -12.7 -5.36441 | opp_overlap 1284547 1284540 TGCTGATATAAAAAA GCCTCCC ATGT GGGAGGC TTTGGAATTTTTACT TERM 1492 1284735 - 1284752 + r 90 -12.7 -3.75832 | opp_overlap 1284735, overlap 1284723 TTTTTGCATAAAAAA GCGCACC CGAG GGTGCGC TTTGCGTGTAATTTT TERM 1493 1284752 - 1284735 - R 100 -12.7 -5.24129 | opp_overlap 1284735 1284723 TTTTTGCATAAAAAA GCGCACC CGAG GGTGCGC TTTGCGTGTAATTTT Spea_1060 1285140 - 1284778 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 1494 1285198 - 1285213 + H 73 -7.6 -4.11773 | opp_overlap 1285197 CTCAGGTAGGAAAGT CGTGAT CTAA ATCACG TTTTAAGGGCTCTTT TERM 1495 1285488 - 1285498 + G 88 -8.2 -4.87291 | GAAGGTATGGGATCT CCCG ACA CGGG TTTTTCATTGGGGTA Spea_1061 1285450 - 1286142 + | cytochrome B561 TERM 1496 1286209 - 1286192 - T 100 -9.9 -5.4833 | opp_overlap 1286192 TTAGCCAATAAAAAA GCCTGTT GTTT AACAGGC TTTTTTAATTTAAAA TERM 1497 1286192 - 1286209 + T 100 -9.9 -5.37593 | opp_overlap 1286192 TTAGCCAATAAAAAA GCCTGTT GTTT AACAGGC TTTTTTAATTTAAAA TERM 1498 1286238 - 1286227 - T 76 -4.4 -5.15969 | TTTTAATTTAAAAAA CTGA CAAG TCAG AATTAGTCTTTCTTG Spea_1062 1286702 - 1286241 - | cytochrome c class II Spea_1063 1286927 - 1287202 + | Trp operon repressor TERM 1499 1287187 - 1287213 + T 72 -9.6 -3.03781 | opp_overlap 1287182, overlap 1287182 AAGAGAAAACGTTAA GCTGTTAATATT ATA AAGATTAACAGC TCTGCTTTAGGTTAC Spea_1064 1287639 - 1287235 - | hypothetical protein TERM 1500 1287440 - 1287456 + g 70 -5.1 -4.41844 | opp_overlap 1287440 1287443, overlap 1287443 TGCTCGTAGATAAAT GCAGGTA ATC TACCTTC TTTTCTGCGCCTTTT TERM 1501 1287734 - 1287763 + r 70 -9.3 -3.25356 | opp_overlap 1287734 GTAGACCAAAAAAAA GCCCGCTTCAC ATTAATCG GTGAAACGGGC TTAAATTCATTCTAA TERM 1502 1287763 - 1287734 - R 100 -11.5 -5.90981 | opp_overlap 1287734 GTAGACCAAAAAAAA GCCCGCTTCAC ATTAATCG GTGAAACGGGC TTAAATTCATTCTAA Spea_1065 1288452 - 1287793 - | peptidylprolyl isomerase FKBP-type TERM 1503 1288129 - 1288154 + g 74 -8.3 -3.89346 | opp_overlap 1288128 1288129, overlap 1288130 TTTAACCTCAGTAAC TTGAACTGGGC GCTG GCCCATTTCAG TTTCTGCAATAAAGC TERM 1504 1289130 - 1289094 - H 73 -7.9 -3.83323 | opp_overlap 1289100, overlap 1289078 1289096 1289100 CTGATATAAGTGAAA TATCAAGCCCGCTCCCC CTA AAGGAGCGGGCTTTTTT GTTTCTTAAGGTGGC TERM 1505 1289128 - 1289096 - H 79 -10.5 -3.49837 | opp_overlap 1289100, overlap 1289078 1289094 1289100 GATATAAGTGAAATA TCAAGCCCGCTCCCC CTA AAGGAGCGGGCTTTT TTGTTTCTTAAGGTG TERM 1506 1289124 - 1289100 - H 100 -15.7 -3.481 | opp_overlap 1289100, overlap 1289096 1289094 TAAGTGAAATATCAA GCCCGCTCCCC CTA AAGGAGCGGGC TTTTTTGTTTCTTAA TERM 1507 1289100 - 1289124 + H 100 -14.3 -5.80003 | opp_overlap 1289100 1289096 1289094 TAAGTGAAATATCAA GCCCGCTCC CCCTAAA GGAGCGGGC TTTTTTGTTTCTTAA Spea_1066 1289165 - 1291630 + | bifunctional aspartokinase I/homeserine dehydrogenase I Spea_1067 1291627 - 1292562 + | homoserine kinase TERM 1508 1292738 - 1292748 + G 71 -6.8 -4.15222 | ATGTGGAAAGCTTAT TGGC ATT GCCA TTTGTTGAAAGAAGT Spea_1068 1292605 - 1293891 + | threonine synthase TERM 1509 1293937 - 1293955 + F 100 -6 -6.15536 | opp_overlap 1293937 CCATTACCTAAACAA GGAAGC TGTTAAT GCTTCC TTTTTTTTGTTGGTT Spea_1069 1294161 - 1294451 + | hypothetical protein Spea_1070 1295321 - 1294467 - | apurinic endonuclease Apn1 Spea_1071 1295548 - 1296099 + | hemerythrin HHE cation binding domain-containing protein TERM 1510 1296126 - 1296153 + T 88 -11.4 -3.65902 | opp_overlap 1296132, overlap 1296132 TTGTATGATAAAACT AAAAAAGAGCGC TTTA GCGCTCTTTTTG TTTCAATCACATCAG TERM 1511 1296147 - 1296132 - T 100 -10.4 -5.50313 | opp_overlap 1296126 1296132 GATAAAACTAAAAAA GAGCGC TTTA GCGCTC TTTTTGTTTCAATCA TERM 1512 1296132 - 1296147 + T 100 -10.4 -5.30616 | opp_overlap 1296132, overlap 1296126 GATAAAACTAAAAAA GAGCGC TTTA GCGCTC TTTTTGTTTCAATCA Spea_1072 1296345 - 1296160 - | hypothetical protein TERM 1513 1296931 - 1296902 - R 93 -10.9 -4.67353 | opp_overlap 1296909 1296921, overlap 1296909 TTAGCTAGTGAAAAA CAAAAAAGCCAGT AGAA ACTGGCTTTTTTT GTTAGGCATGGAAAG TERM 1514 1296909 - 1296924 + r 100 -9 -5.7946 | opp_overlap 1296902 1296909, overlap 1296921 GTGAAAAACAAAAAA GCCAGT AGAA ACTGGC TTTTTTTGTTAGGCA TERM 1515 1296924 - 1296909 - R 100 -9 -5.93252 | opp_overlap 1296909 1296921, overlap 1296902 GTGAAAAACAAAAAA GCCAGT AGAA ACTGGC TTTTTTTGTTAGGCA Spea_1073 1298601 - 1296964 - | glucose-6-phosphate isomerase TERM 1516 1297003 - 1297018 + g 70 -9 -3.46783 | overlap 1297010 GTTAATTAAACCATT GCTCGA TGAG TCGAGC TCTTTGGCTTCAGTA TERM 1517 1298312 - 1298347 + g 79 -9 -4.08279 | overlap 1298309 TTGTCAGCAGGGGCA CGCAGAGCTGTGTGCA AAAC TGCACGTTGTTCTGTG TTGTTTATCACGTGT Spea_1074 1299575 - 1298619 - | transaldolase B TERM 1518 1299847 - 1299806 - R 90 -9.8 -4.48221 | gap 1, opp_overlap 1299806 1299809 1299814, overlap 1299814 TATGAATGCATAAAA TTAA-AAAAGCCCATGGCT GTGAT AACCATAGGCTTTTGTTAA CTTTTACCTGAATTA TERM 1519 1299838 - 1299814 - R 95 -8.6 -5.50313 | opp_overlap 1299809 1299806 1299814, overlap 1299806 CATAAAATTAAAAAA GCCCATGGCT GTGAT AACCATAGGC TTTTGTTAACTTTTA TERM 1520 1299814 - 1299838 + r 74 -4.9 -4.77719 | opp_overlap 1299814 1299806, overlap 1299809 1299806 CATAAAATTAAAAAA GCCCATGGCTG TGA TAACCATAGGC TTTTGTTAACTTTTA Spea_1075 1300957 - 1299860 - | OmpA/MotB domain-containing protein TERM 1521 1301136 - 1301155 + r 95 -13.6 -3.28497 | opp_overlap 1301136, overlap 1301131 TAGGTTGCAAAAAAA GGGCGCTT TAAA AAGCGCCC TTAAATTTGCAGTGA TERM 1522 1301155 - 1301136 - R 100 -13.6 -5.41143 | opp_overlap 1301131 1301136 TAGGTTGCAAAAAAA GGGCGCTT TAAA AAGCGCCC TTAAATTTGCAGTGA Spea_1076 1303559 - 1301193 - | putative phosphoketolase TERM 1523 1304145 - 1304157 + G 72 -4.7 -4.56978 | AGTCGTCAAGGCGGC GGACG AAG CGGCC TTTCTTCTTTCCAGG TERM 1524 1304754 - 1304785 + G 70 -5.1 -4.38927 | opp_overlap 1304752 1304749, overlap 1304755 GTGGCATATACTATC GCTCAAGCGATGC AAGCTG GTATCGCTCGAGG TTTATTCTCTAACGA Spea_1077 1303980 - 1305461 + | amino acid carrier protein TERM 1525 1305520 - 1305484 - f 70 -8.8 -3.44051 | opp_overlap 1305485 1305493, overlap 1305493 GCGGTATCAGTACAA TCTAAAAAACCACGCC GTTTA AGCGTGGTTTTTTTGT TTTTGTTCAGTATCA TERM 1526 1305485 - 1305519 + F 95 -11.6 -5.12068 | opp_overlap 1305484 1305493, overlap 1305493 CGGTATCAGTACAAT CTAAAAAACCACGC CGTTTAA GCGTGGTTTTTTTG TTTTTGTTCAGTATC TERM 1527 1305511 - 1305493 - f 91 -8.1 -5.1925 | opp_overlap 1305485 1305493, overlap 1305484 GTACAATCTAAAAAA CCACGCC GTTTA AGCGTGG TTTTTTTGTTTTTGT TERM 1528 1305493 - 1305511 + F 100 -7.4 -6.23317 | opp_overlap 1305493 1305484, overlap 1305485 GTACAATCTAAAAAA CCACGC CGTTTAA GCGTGG TTTTTTTGTTTTTGT Spea_1078 1305567 - 1306340 + | hypothetical protein TERM 1529 1306368 - 1306393 + F 84 -10.5 -3.94933 | opp_overlap 1306373, overlap 1306373 CTAGTCGAAAAAGTT AAAAAGCAGCC TGAT GGCTGCTTTTC TATTTTTAAGCTTAC TERM 1530 1306388 - 1306373 - f 93 -10.4 -4.92239 | opp_overlap 1306368 1306373 CGAAAAAGTTAAAAA GCAGCC TGAT GGCTGC TTTTCTATTTTTAAG TERM 1531 1306373 - 1306388 + F 93 -10.4 -4.98672 | opp_overlap 1306373, overlap 1306368 CGAAAAAGTTAAAAA GCAGCC TGAT GGCTGC TTTTCTATTTTTAAG Spea_1079 1306950 - 1307264 + | ArsR family transcriptional regulator TERM 1532 1307350 - 1307369 + T 100 -10.8 -5.74122 | opp_overlap 1307350 ACCGTGGATGTAAAA TAGAGAGG CTTG CCTCTCTA TTTTTTTATCTACTG TERM 1533 1307369 - 1307350 - T 90 -10.8 -4.18197 | opp_overlap 1307350 ACCGTGGATGTAAAA TAGAGAGG CTTG CCTCTCTA TTTTTTTATCTACTG TERM 1534 1307558 - 1307529 - T 84 -12.3 -2.9348 | opp_overlap 1307529 1307529 1307537, overlap 1307537 GGCAAATTTCAGATA TAAAAAAACCGGC CAAG GCCGGTTTTTTTC ATTTGCTTTAAACTA TERM 1535 1307529 - 1307558 + T 84 -12.3 -3.03865 | opp_overlap 1307529 1307537, overlap 1307529 1307537 GGCAAATTTCAGATA TAAAAAAACCGGC CAAG GCCGGTTTTTTTC ATTTGCTTTAAACTA TERM 1536 1307529 - 1307559 + T 88 -10.7 -4.07246 | gap 1, opp_overlap 1307529 1307537, overlap 1307529 1307537 GGCAAATTTCAGATA T-AAAAAAACCGGC CAAG GCCGGTTTTTTTCA TTTGCTTTAAACTAA TERM 1537 1307550 - 1307537 - T 100 -9.5 -5.76633 | opp_overlap 1307529 1307529 1307537, overlap 1307529 TCAGATATAAAAAAA CCGGC CAAG GCCGG TTTTTTTCATTTGCT TERM 1538 1307537 - 1307550 + T 100 -9.5 -5.73563 | opp_overlap 1307537 1307529, overlap 1307529 1307529 TCAGATATAAAAAAA CCGGC CAAG GCCGG TTTTTTTCATTTGCT Spea_1080 1307843 - 1307577 - | 30S ribosomal protein S20 Spea_1081 1308099 - 1309658 + | integral membrane protein MviN Spea_1082 1309724 - 1310659 + | riboflavin biosynthesis protein RibF TERM 1539 1313037 - 1313021 - g 74 -10.9 -2.8372 | overlap 1313020 TACCGCTGACGAAAT CTGGAAG CTA CTTCCAG GTGAGCGCGGTGAGT Spea_1083 1310691 - 1313513 + | isoleucyl-tRNA synthetase TERM 1540 1313525 - 1313549 + F 100 -12.2 -5.66684 | opp_overlap 1313528 TTAAGTAAGTGATAG CAACGGCTCT TTTAT AGGGCCGTTG TTTTTTTGTAAGTTA Spea_1084 1313634 - 1314146 + | lipoprotein signal peptidase Spea_1085 1314152 - 1314574 + | peptidylprolyl isomerase FKBP-type TERM 1541 1315148 - 1315128 - g 76 -4 -4.96848 | gap 1, overlap 1315129 1315131 1315144 GTCTTTACAGAAAAA GTACCCTTC AATC GAAGGGC-C GCGTAAGGATGATAT TERM 1542 1315146 - 1315131 - g 70 -9 -3.35962 | overlap 1315128 1315129 1315144 TTTACAGAAAAAGTA CCCTTC AATC GAAGGG CCGCGTAAGGATGAT Spea_1086 1314577 - 1315506 + | hydroxymethylbutenyl pyrophosphate reductase TERM 1543 1315566 - 1315541 - f 83 -9.1 -3.98775 | opp_overlap 1315547, overlap 1315547 ACAAATTGAATTAAA TAAAAAGAGGC TTAG GCCTCTTTTTT TTCGCTTAAAATTCA TERM 1544 1315547 - 1315560 + F 100 -8.1 -5.86332 | opp_overlap 1315547 1315541 TGAATTAAATAAAAA GAGGC TTAG GCCTC TTTTTTTTCGCTTAA TERM 1545 1315560 - 1315547 - f 93 -8.1 -5.38326 | opp_overlap 1315547, overlap 1315541 TGAATTAAATAAAAA GAGGC TTAG GCCTC TTTTTTTTCGCTTAA Spea_1087 1315749 - 1316309 + | type IV pilus modification protein PilV Spea_1088 1316314 - 1317303 + | type IV pilus assembly protein PilW Spea_1089 1317314 - 1317751 + | type IV pilus assembly protein PilX Spea_1090 1317754 - 1321338 + | type IV pilin biogenesis protein, putative Spea_1091 1321347 - 1321739 + | methylation site containing protein Spea_1092 1321790 - 1322041 + | hypothetical protein TERM 1546 1322035 - 1322045 + T 76 -6.8 -4.41616 | opp_overlap 1322043 AGATAGTCTTACGGT GCGA TAA TCGC TTTATTTAAAGCAGT TERM 1547 1322056 - 1322078 + T 77 -6.4 -4.56914 | opp_overlap 1322043 1322056 ATCGCTTTATTTAAA GCAGTAAT TTAATCT ATTACTGC TTTTCGTTTAGCTAC Spea_1093 1322622 - 1322086 - | type IV pilus biogenesis protein, putative Spea_1094 1323297 - 1322785 - | type IV pilus biogenesis protein, putative TERM 1548 1323300 - 1323317 + H 71 -4.9 -4.50358 | opp_overlap 1323303 TTTTGTGGGGCATAT TAACTCA TCCT TGAGTTG TTTTAATATTTACAT Spea_1095 1323545 - 1323883 + | nitrogen regulatory protein P-II TERM 1549 1323936 - 1323891 - T 79 -10.7 -3.20382 | opp_overlap 1323890, overlap 1323894 CGGTATAGCGATTAA CGACTTTTTCGCATTATCAGT TATG ACAAATAATGCGAAAAAGTTA GAGTTGTACTAGAAG TERM 1550 1323933 - 1323894 - T 95 -14.6 -2.79574 | opp_overlap 1323890, overlap 1323891 TATAGCGATTAACGA CTTTTTCGCATTATCAGT TATG ACAAATAATGCGAAAAAG TTAGAGTTGTACTAG Spea_1096 1324995 - 1323979 - | LacI family transcription regulator Spea_1097 1325416 - 1328025 + | TonB-dependent receptor TERM 1551 1328054 - 1328071 + F 100 -12.7 -5.06414 | opp_overlap 1328054 TGAGTACAAGATAAA GCCCAGC ATTT GCTGGGC TTTTTATTGAAAAGA TERM 1552 1328071 - 1328054 - f 100 -12.7 -4.29304 | opp_overlap 1328054 TGAGTACAAGATAAA GCCCAGC ATTT GCTGGGC TTTTTATTGAAAAGA TERM 1553 1329185 - 1329205 + G 72 -5.3 -4.58283 | overlap 1329193 GAGAAGAACTGTGTG GCATTGGGC TTG GCGCAAGGC TTTTTGGAGCCATTA Spea_1098 1328192 - 1329718 + | tryptophan halogenase TERM 1554 1329720 - 1329768 + T 89 -9.7 -4.28323 | opp_overlap 1329723, overlap 1329723 1329725 1329728 TGCAGAAGGTATAGT TAATCTTTTTAGCCAAGTTCGGC AAT GCTGAACTTGGCTAATACTATGA TTTATGTTGATTGGT TERM 1555 1329765 - 1329723 - T 70 -9.2 -3.1479 | opp_overlap 1329723 1329720 1329725 1329728 AGAAGGTATAGTTAA TCTTTTTAGCCAAGTTCGGC AAT GCTGAACTTGGCTAATACTA TGATTTATGTTGATT TERM 1556 1329723 - 1329765 + T 82 -11.4 -3.12856 | opp_overlap 1329723, overlap 1329720 1329725 1329728 AGAAGGTATAGTTAA TCTTTTTAGCCAAGTTCGGC AAT GCTGAACTTGGCTAATACTA TGATTTATGTTGATT TERM 1557 1329725 - 1329763 + T 93 -14 -3.10881 | opp_overlap 1329723, overlap 1329723 1329720 1329728 AAGGTATAGTTAATC TTTTTAGCCAAGTTCGGC AAT GCTGAACTTGGCTAATAC TATGATTTATGTTGA TERM 1558 1329728 - 1329760 + T 100 -20.1 -2.75 | opp_overlap 1329723, overlap 1329725 1329723 1329720 GTATAGTTAATCTTT TTAGCCAAGTTCGGC AAT GCTGAACTTGGCTAA TACTATGATTTATGT Spea_1099 1330513 - 1329785 - | SapC family protein TERM 1559 1329866 - 1329878 + g 72 -2.6 -5.08255 | GTGAGCGTAGATTAA TGGC AGTAA GCCG TTTTCTTTTAAAGAT TERM 1560 1331084 - 1331112 + H 100 -13.2 -5.71712 | overlap 1331085 CCCAGAAACTAGCGT GGGCCGAGTACT GATTG AGTACTCGGCCA TTTTTTTATCTGGCA TERM 1561 1331085 - 1331111 + H 100 -16.7 -4.01943 | overlap 1331084 CCAGAAACTAGCGTG GGCCGAGTACT GATTG AGTACTCGGCC ATTTTTTTATCTGGC TERM 1562 1331540 - 1331554 + G 70 -9.2 -3.46647 | opp_overlap 1331540 1331539, overlap 1331538 CACTGCGACAAAGAT GCGGCC GAT GGTCGC TGTTTCCTAGCTGAA Spea_1100 1331282 - 1334002 + | Beta-N-acetylhexosaminidase TERM 1563 1334056 - 1334082 + F 86 -8 -4.96276 | opp_overlap 1334056 ATAACTAAGCCTAAA CGTAGCACTGCT CAT GGTATTGCTACG TTTTCCTTTTTTTGT TERM 1564 1334132 - 1334119 - f 79 -5.3 -5.05153 | opp_overlap 1334119, overlap 1334122 AGTTTAAAAAATAAA TGACA ACGC TGTCA TTGGTGTTGTAACAT TERM 1565 1335078 - 1335103 + G 100 -8.3 -5.14563 | gap 1 AACTATCTCCAAGCT TGCAGC-CACCA GAG TGGGGCGCTGCA TTTTTTGCTCAGCAG Spea_1101 1334240 - 1335136 + | ATPase BadF/BadG/BcrA/BcrD type Spea_1102 1335168 - 1336301 + | N-acetylglucosamine-6-phosphate deacetylase Spea_1103 1336417 - 1337601 + | hypothetical protein TERM 1566 1337697 - 1337708 + F 72 -4.4 -4.78107 | opp_overlap 1337697 GTAGAAGCAATAAAT GACA GCGT TGTC TTTTTGGTCGTAATG TERM 1567 1338323 - 1338310 - g 70 -5.2 -4.41348 | opp_overlap 1338287 1338310 TTGGCCCTAAAGAAA GCGC CGCGAT GCGC ATTAGTATCATGGGG Spea_1104 1337892 - 1339205 + | glucose/galactose transporter TERM 1568 1339238 - 1339220 - f 79 -11 -3.15758 | opp_overlap 1339219 ACAATCGGTTATGAA GCTCCTGC CAA GCAAGAGC CGTTATAAAGGAGCC TERM 1569 1339248 - 1339263 + F 100 -10.4 -5.79595 | opp_overlap 1339248 AAGAGCCGTTATAAA GGAGCC TAAG GGCTCC TTTTTTGTTTTAGAA TERM 1570 1339263 - 1339248 - f 84 -10.4 -3.87641 | opp_overlap 1339248 AAGAGCCGTTATAAA GGAGCC TAAG GGCTCC TTTTTTGTTTTAGAA TERM 1571 1339676 - 1339692 + F 100 -12.3 -5.98675 | opp_overlap 1339676 TGCAGATACAAAAAA GCCACTC ATT GAGTGGC TTTTTTGTTTTTATG TERM 1572 1339692 - 1339676 - f 100 -12.3 -5.4251 | opp_overlap 1339676 TGCAGATACAAAAAA GCCACTC ATT GAGTGGC TTTTTTGTTTTTATG TERM 1573 1339867 - 1339883 + F 70 -9.5 -2.62616 | opp_overlap 1339869, overlap 1339869 TCGAACCAGGGACAC GAGGATT TTC AATCCTC TGCTCTACCGACTGA TERM 1574 1340435 - 1340418 - f 100 -11.3 -5.4251 | opp_overlap 1340418 CTCAGATACAAAAAA GCCACTC GATG GAGTGGC TTTTTTGTTTTTATG TERM 1575 1340418 - 1340435 + F 100 -11.3 -5.98675 | opp_overlap 1340418 CTCAGATACAAAAAA GCCACTC GATG GAGTGGC TTTTTTGTTTTTATG TERM 1576 1340610 - 1340626 + F 70 -9.5 -2.62616 | opp_overlap 1340612, overlap 1340612 TCGAACCAGGGACAC GAGGATT TTC AATCCTC TGCTCTACCGACTGA TERM 1577 1341107 - 1341160 + F 100 -14.9 -3.42078 | opp_overlap 1341112 1341114 1341116 1341125, overlap 1341112 1341125 GCGGCTAAGTCGCTG GAAAACAGATACAAAAAAGCCACTC GATG GAGTGGCTTTTTTGTTTTTATTGTC TTGTCCTGAAATGTG TERM 1578 1341112 - 1341155 + F 95 -13.4 -3.77808 | opp_overlap 1341112 1341114 1341116 1341125, overlap 1341107 1341125 TAAGTCGCTGGAAAA CAGATACAAAAAAGCCACTC GATG GAGTGGCTTTTTTGTTTTTA TTGTCTTGTCCTGAA TERM 1579 1341155 - 1341112 - f 100 -13.4 -4.08692 | opp_overlap 1341112 1341107 1341125, overlap 1341114 1341116 1341125 TAAGTCGCTGGAAAA CAGATACAAAAAAGCCACTC GATG GAGTGGCTTTTTTGTTTTTA TTGTCTTGTCCTGAA TERM 1580 1341153 - 1341114 - f 95 -13.8 -3.63922 | opp_overlap 1341112 1341107 1341125, overlap 1341112 1341116 1341125 AGTCGCTGGAAAACA GATACAAAAAAGCCACTC GATG GAGTGGCTTTTTTGTTTT TATTGTCTTGTCCTG TERM 1581 1341151 - 1341116 - f 100 -16.4 -3.39908 | opp_overlap 1341112 1341107 1341125, overlap 1341114 1341112 1341125 TCGCTGGAAAACAGA TACAAAAAAGCCACTC GATG GAGTGGCTTTTTTGTT TTTATTGTCTTGTCC TERM 1582 1341142 - 1341125 - f 100 -11.3 -5.46276 | opp_overlap 1341112 1341107 1341125, overlap 1341116 1341114 1341112 AACAGATACAAAAAA GCCACTC GATG GAGTGGC TTTTTTGTTTTTATT TERM 1583 1341125 - 1341142 + F 100 -11.3 -6.01725 | opp_overlap 1341125 1341116 1341114 1341112, overlap 1341112 1341107 AACAGATACAAAAAA GCCACTC GATG GAGTGGC TTTTTTGTTTTTATT TERM 1584 1341163 - 1341191 + F 86 -9.8 -3.97947 | gap 1, opp_overlap 1341172 TGTTTTTATTGTCTT GTCCTGAAATGTG TTTA CACATTT-AGGAC TTTATAATGACTACA Spea_1105 1341198 - 1341596 + | transposase TERM 1585 1341936 - 1341949 + G 72 -6.7 -4.28111 | opp_overlap 1341935 AGTTAGTGCCAACAG CACCT GAAG AGGTG TTTGTTAGTGATATA TERM 1586 1342323 - 1342334 + G 72 -3 -4.9792 | AGTTAAAGCAACTCG TTGA GGAG TCAA TTTTTATATACAATG TERM 1587 1342429 - 1342406 - g 100 -13.2 -5.27923 | opp_overlap 1342408 CAAGTGCATAAAAAA GACCAGCAGC AGAA GCTACTGGTC TAGTAAAAACCGTCA Spea_1106 1341680 - 1342432 + | integrase catalytic region TERM 1588 1342628 - 1342644 + T 70 -9.5 -2.62616 | opp_overlap 1342630, overlap 1342630 TCGAACCAGGGACAC GAGGATT TTC AATCCTC TGCTCTACCGACTGA TERM 1589 1343040 - 1343093 + T 100 -15.7 -4.42788 | gap 1, opp_overlap 1343045 1343047 1343051, overlap 1343047 1343051 AACTGGCGCGGGGCG TTAAAC-ATAAAGGCGTCGCTTAAAT TAA GTTTAAGCGACGCCTTTATTGGTTCA TTTTATAAGCTTGCA TERM 1590 1343087 - 1343045 - T 100 -19.5 -3.53012 | opp_overlap 1343040 1343047 1343051, overlap 1343047 1343051 GCGCGGGGCGTTAAA CATAAAGGCGTCGCTTAAA TTAAG TTTAAGCGACGCCTTTATT GGTTCATTTTATAAG TERM 1591 1343047 - 1343085 + T 100 -22.8 -3.55784 | opp_overlap 1343045 1343047 1343051, overlap 1343040 1343051 GCGGGGCGTTAAACA TAAAGGCGTCGCTTAAAT TAA GTTTAAGCGACGCCTTTA TTGGTTCATTTTATA TERM 1592 1343085 - 1343047 - T 100 -22.1 -3.34398 | opp_overlap 1343047 1343040 1343051, overlap 1343045 1343051 GCGGGGCGTTAAACA TAAAGGCGTCGCTTAAA TTAAG TTTAAGCGACGCCTTTA TTGGTTCATTTTATA TERM 1593 1343051 - 1343081 + T 100 -19.2 -4.37247 | opp_overlap 1343047 1343045 1343051, overlap 1343047 1343040 GGCGTTAAACATAAA GGCGTCGCTTAAAT TAA GTTTAAGCGACGCC TTTATTGGTTCATTT TERM 1594 1343081 - 1343051 - T 100 -18.5 -4.32857 | opp_overlap 1343051 1343047 1343040, overlap 1343047 1343045 GGCGTTAAACATAAA GGCGTCGCTTAAA TTAAG TTTAAGCGACGCC TTTATTGGTTCATTT Spea_1107 1343390 - 1343112 - | hypothetical protein Spea_1108 1344457 - 1343393 - | A/G-specific adenine glycosylase TERM 1595 1343483 - 1343513 + g 77 -10.5 -3.39505 | opp_overlap 1343481 1343477 ATGAGTTAAGTTATA CCAGACCGTGGAA GTTTG TTCCATGATCTGG TTATCGCTATGCCCT TERM 1596 1344109 - 1344075 - G 71 -7.9 -3.92075 | gap 1, overlap 1344079 1344082 AGCCCCAGTGATAAA GACAGT-ACCGCTCCA GCGG TGGAGCGGCCAATGCC GGGCAGCGCTAAAAC TERM 1597 1344101 - 1344082 - G 84 -13.6 -2.83519 | overlap 1344079 1344075 GTGATAAAGACAGTA CCGCTCCA GCGG TGGAGCGG CCAATGCCGGGCAGC Spea_1109 1344730 - 1345443 + | tRNA (guanine-N(7))-methyltransferase Spea_1110 1345494 - 1345820 + | hypothetical protein TERM 1598 1345971 - 1345993 + G 95 -12 -4.27584 | opp_overlap 1345971 1345970 1345968 ACGGTGTCACAATAG GGGCTGGAGA TTA TCTCGAGCCC TTTTCAATTCAGAGT TERM 1599 1345993 - 1345971 - g 76 -12 -2.52742 | opp_overlap 1345971, overlap 1345970 1345968 ACGGTGTCACAATAG GGGCTGGAGA TTA TCTCGAGCCC TTTTCAATTCAGAGT Spea_1111 1345820 - 1346734 + | glutaminase Spea_1112 1346968 - 1347783 + | hypothetical protein TERM 1600 1347857 - 1347883 + F 93 -9.5 -4.87318 | GACTGTCTTGCAACC CCCCTGCAT CCCACCTTT ATGCAGGGG TTTTTCCGTTTTAAG TERM 1601 1348015 - 1348005 - f 85 -5.4 -5.19819 | AAATAAAAGCAAAAA CCAA ATA TTGG TAAATAATAAAAACT Spea_1113 1348137 - 1349078 + | LysR family transcriptional regulator TERM 1602 1349177 - 1349215 + F 70 -7.7 -3.74224 | gap 1, opp_overlap 1349178, overlap 1349178 AAGCTCTGTAGCTAA ATTGTTTAGCC-AAGCTA GAGT TAGTTTTGGCTAAACAAC TTTAAATCATTTCAG TERM 1603 1349178 - 1349214 + F 80 -11.2 -2.84053 | gap 1, opp_overlap 1349178, overlap 1349177 AGCTCTGTAGCTAAA TTGTTTAGCC-AAGCTA GAGT TAGTTTTGGCTAAACAA CTTTAAATCATTTCA TERM 1604 1349214 - 1349178 - f 76 -9 -3.64822 | gap 1, opp_overlap 1349177 1349178 AGCTCTGTAGCTAAA TTGTTTAGCC-AAGCTA GAGT TAGTTTTGGCTAAACAA CTTTAAATCATTTCA TERM 1605 1349421 - 1349443 + F 100 -14.2 -5.05601 | overlap 1349423 CATCCTAGTTTGGTT TGCCCCGGTT TCC AACCGGGGTA TTTTTCTATCTACTC TERM 1606 1349423 - 1349441 + F 100 -14.6 -4.14422 | overlap 1349421 TCCTAGTTTGGTTTG CCCCGGTT TCC AACCGGGG TATTTTTCTATCTAC TERM 1607 1349968 - 1349984 + G 75 -2.9 -5.1356 | AAAGAAGATAATTAA GCGCAAA GAG TTAGTGC TTTTTCTTGCTCAAA Spea_1114 1349870 - 1350886 + | transposase IS116/IS110/IS902 family protein Spea_1115 1351573 - 1351833 + | hypothetical protein TERM 1608 1351873 - 1351897 + F 84 -7.9 -4.76041 | TTGTTATTTCTTAGT GCCAAGGTTTA AAG TCAATCTTGGC TTTTTAATCGCTATC Spea_1116 1352097 - 1354082 + | hypothetical protein TERM 1609 1354113 - 1354138 + T 91 -13.3 -2.99471 | opp_overlap 1354120 TGGTATTGGGGGGTA GGAGCAAGGTC GTAT GACCTCGCTCC TGTCTGTGGCGCTAG Spea_1117 1355326 - 1354169 - | C4-dicarboxylate transporter/malic acid transport protein TERM 1610 1355513 - 1355533 + G 76 -9.1 -3.76176 | opp_overlap 1355512, overlap 1355514 TTGAATAGAAATATT TCTGATTTG AAT CAAATCAGG TTGTTACTGGATTTA TERM 1611 1355514 - 1355532 + G 72 -10.4 -2.84982 | opp_overlap 1355512, overlap 1355513 TGAATAGAAATATTT CTGATTTG AAT CAAATCAG GTTGTTACTGGATTT TERM 1612 1356344 - 1356322 - g 100 -14.2 -4.0641 | CTCTACTCATAGAAA CGAGCCACTG TAT CAATGGCTCG TAGGACTCATTAAAT Spea_1118 1355486 - 1356382 + | LysR family transcriptional regulator Spea_1119 1358125 - 1356467 - | cytochrome bd ubiquinol oxidase subunit I TERM 1613 1358294 - 1358314 + r 88 -11.2 -3.51804 | opp_overlap 1358294, overlap 1358290 1358286 TGGAACAATAAAAAA TCGGTCAC ATCTA GTGACCGA TTCGTTGGTTTCATT TERM 1614 1358314 - 1358294 - R 100 -11.2 -5.64873 | opp_overlap 1358294 1358290 1358286 TGGAACAATAAAAAA TCGGTCAC ATCTA GTGACCGA TTCGTTGGTTTCATT Spea_1120 1360235 - 1358352 - | hypothetical protein TERM 1615 1358612 - 1358630 + g 79 -8.9 -4.18488 | overlap 1358607 TGACGTAGTACTCGA TGGACTC TTCAC GAGTCCA TTTCTTAGCATGAAT Spea_1121 1361527 - 1360391 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 1616 1361044 - 1361075 + g 73 -7.4 -4.07885 | gap 1, opp_overlap 1361051 1361052, overlap 1361045 CGTGCATCAAGTCTA AGTTAAAG-CTCTGG TAA CCAGAGACTTTAGCC TTTTGGGCGGCAATA TERM 1617 1361045 - 1361074 + g 75 -10.9 -3.04517 | gap 1, opp_overlap 1361051 1361052, overlap 1361044 GTGCATCAAGTCTAA GTTAAAG-CTCTGG TAA CCAGAGACTTTAGC CTTTTGGGCGGCAAT Spea_1122 1362126 - 1361527 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 1618 1362211 - 1362233 + r 70 -9.1 -3.16117 | opp_overlap 1362213, overlap 1362209 1362213 TAAACGTCACAAAAA AACAGGGGC GCTAG GCCCCTGTG TGTTCGATTCAATCT TERM 1619 1362231 - 1362213 - R 100 -11.7 -5.63504 | opp_overlap 1362211 1362209 1362213 AACGTCACAAAAAAA CAGGGGC GCTAG GCCCCTG TGTGTTCGATTCAAT TERM 1620 1362213 - 1362231 + r 83 -11.7 -3.13788 | opp_overlap 1362213, overlap 1362211 1362209 AACGTCACAAAAAAA CAGGGGC GCTAG GCCCCTG TGTGTTCGATTCAAT Spea_1123 1362687 - 1362253 - | hypothetical protein TERM 1621 1362589 - 1362609 + g 88 -3.9 -5.74684 | opp_overlap 1362589 GCTAAGGGCAACATA GTGGATATC GTA GTTACCCAC TTTTTCTTTTTGTTC Spea_1124 1363043 - 1362771 - | hypothetical protein TERM 1622 1363021 - 1363042 + g 73 -10.1 -3.38768 | opp_overlap 1363025, overlap 1363022 TGAATATAGAGTTGA AGCAGCAGG TCGC CCTGCTGCA TTATGGCTGGTGTCA TERM 1623 1363022 - 1363041 + g 83 -13.6 -2.6294 | opp_overlap 1363025, overlap 1363021 GAATATAGAGTTGAA GCAGCAGG TCGC CCTGCTGC ATTATGGCTGGTGTC Spea_1125 1363606 - 1363058 - | protein of unknown function YGGT Spea_1126 1364460 - 1363642 - | pyrroline-5-carboxylate reductase Spea_1127 1365364 - 1364663 - | alanine racemase domain-containing protein TERM 1624 1365031 - 1365045 + g 70 -2.1 -5.03314 | gap 1, overlap 1365037 CCGGGCGCTGCTCAT TCAGCC GTTG GGC-GA TTTTTTCACGCTCGA Spea_1128 1365400 - 1366437 + | twitching motility protein Spea_1129 1366461 - 1367573 + | twitching motility protein TERM 1625 1367594 - 1367618 + F 100 -10.1 -5.40072 | opp_overlap 1367594 GTCACCCCGATAAAA GCTGGCAAT ATATTCA ATTGCCAGC TTTTTTTACGGCCCG TERM 1626 1367618 - 1367594 - f 90 -10.1 -4.38712 | opp_overlap 1367594 GTCACCCCGATAAAA GCTGGCAAT ATATTCA ATTGCCAGC TTTTTTTACGGCCCG Spea_1130 1367696 - 1368709 + | ferrochelatase TERM 1627 1368807 - 1368776 - T 100 -16 -3.58329 | opp_overlap 1368776 1368777, overlap 1368767 1368765 1368777 1368781 1368784 TAAATAGCTTTTAAA GCAAAGAACCCAGC TTGT GCTGGGTTCTTTGA TTTTTGTTGGTGAAT TERM 1628 1368776 - 1368807 + T 100 -16 -5.14163 | opp_overlap 1368767 1368765 1368776 1368777 1368781 1368784, overlap 1368777 TAAATAGCTTTTAAA GCAAAGAACCCAGC TTGT GCTGGGTTCTTTGA TTTTTGTTGGTGAAT TERM 1629 1368777 - 1368806 + T 100 -19.5 -3.67413 | opp_overlap 1368765 1368776 1368777 1368781 1368784, overlap 1368776 AAATAGCTTTTAAAG CAAAGAACCCAGC TTGT GCTGGGTTCTTTG ATTTTTGTTGGTGAA TERM 1630 1368806 - 1368777 - T 100 -19.5 -2.74515 | opp_overlap 1368777 1368776, overlap 1368765 1368776 1368781 1368784 AAATAGCTTTTAAAG CAAAGAACCCAGC TTGT GCTGGGTTCTTTG ATTTTTGTTGGTGAA TERM 1631 1368802 - 1368781 - T 100 -14.5 -4.06055 | opp_overlap 1368777 1368776, overlap 1368777 1368776 1368784 AGCTTTTAAAGCAAA GAACCCAGC TTGT GCTGGGTTC TTTGATTTTTGTTGG TERM 1632 1368799 - 1368784 - T 89 -10.4 -4.15396 | opp_overlap 1368777 1368776, overlap 1368781 1368777 1368776 TTTTAAAGCAAAGAA CCCAGC TTGT GCTGGG TTCTTTGATTTTTGT Spea_1131 1369293 - 1368868 - | Holliday junction resolvase-like protein Spea_1132 1369904 - 1369332 - | hypothetical protein Spea_1133 1370246 - 1369917 - | translation initiation factor Sui1 TERM 1633 1370051 - 1370069 + g 82 -6 -5.18726 | GTTTTTTGAGTTTTT GGGCTAAG GCT TTTAGCTC TTTTTCTTGTAAGCC TERM 1634 1370328 - 1370363 + r 86 -9.1 -4.38712 | opp_overlap 1370328, overlap 1370329 1370330 GTTAAGAGAAACTTA CTCGTTTGTCAGGTT AATGGC AGCCTGACAAACGGC TTTTATAGAAATAGC TERM 1635 1370329 - 1370362 + r 85 -12.6 -3.22906 | opp_overlap 1370328, overlap 1370328 1370330 TTAAGAGAAACTTAC TCGTTTGTCAGGTT AATGGC AGCCTGACAAACGG CTTTTATAGAAATAG TERM 1636 1370330 - 1370361 + r 91 -13.9 -2.53422 | opp_overlap 1370328, overlap 1370329 1370328 TAAGAGAAACTTACT CGTTTGTCAGGTT AATGGC AGCCTGACAAACG GCTTTTATAGAAATA Spea_1134 1370980 - 1370648 - | hypothetical protein Spea_1135 1371140 - 1371697 + | hypothetical protein TERM 1637 1371767 - 1371738 - T 75 -10.1 -3.14931 | opp_overlap 1371746, overlap 1371746 CTTAGCTTCCAGTAA CGAAAAAACGGCC ATCA GGCCGTTTTTTTA TACCTATTTTTTTAG TERM 1638 1371746 - 1371759 + T 100 -9.5 -5.65177 | opp_overlap 1371738 1371746 CCAGTAACGAAAAAA CGGCC ATCA GGCCG TTTTTTTATACCTAT TERM 1639 1371759 - 1371746 - T 100 -9.5 -5.30155 | opp_overlap 1371746, overlap 1371738 CCAGTAACGAAAAAA CGGCC ATCA GGCCG TTTTTTTATACCTAT Spea_1136 1372700 - 1371822 - | LysR family transcriptional regulator TERM 1640 1372475 - 1372490 + g 72 -9 -3.59979 | AGTTAAGACGTTGAT GCTGTG CCAG CACAGC TTTGGCCTGAGGCAA Spea_1137 1372784 - 1373197 + | transmembrane pair domain-containing protein TERM 1641 1373274 - 1373299 + F 100 -11.9 -5.85425 | ACCCATCAACCCTTT GCCGTTGTAAC TAAA GTTGCAGCGGC TTTTTTATTTGTTTG Spea_1138 1373454 - 1375412 + | TonB-dependent receptor plug TERM 1642 1375459 - 1375446 - f 72 -9.5 -2.94595 | opp_overlap 1375446 AACAAACTTGATATA GGGGC TTAA GCCCC TTGTAAGCGATATCA TERM 1643 1375446 - 1375459 + F 75 -9.5 -3.30771 | opp_overlap 1375446 AACAAACTTGATATA GGGGC TTAA GCCCC TTGTAAGCGATATCA Spea_1139 1375692 - 1376288 + | OmpA/MotB domain-containing protein TERM 1644 1376971 - 1376992 + G 71 -9.5 -3.27298 | AGTGGCTGTGGCAGA GTTAGCCGA CTCA TCGGTTAAC TTCGTGGTTCGCCCC Spea_1140 1376318 - 1377142 + | MscS mechanosensitive ion channel TERM 1645 1377162 - 1377201 + T 93 -13.8 -3.26318 | opp_overlap 1377167 1377173, overlap 1377163 1377173 AGCCAGTAGATATTG GATAATAAAAAGGTCGGC ATAT GCCGACCTTTTTATTAGA ATTTCTTATTAAACC TERM 1646 1377163 - 1377200 + T 100 -17.3 -2.55309 | opp_overlap 1377167 1377173, overlap 1377162 1377173 GCCAGTAGATATTGG ATAATAAAAAGGTCGGC ATAT GCCGACCTTTTTATTAG AATTTCTTATTAAAC TERM 1647 1377196 - 1377167 - T 100 -18.1 -3.35934 | opp_overlap 1377163 1377162 1377173, overlap 1377173 GTAGATATTGGATAA TAAAAAGGTCGGC ATAT GCCGACCTTTTTA TTAGAATTTCTTATT TERM 1648 1377190 - 1377173 - T 100 -12.7 -5.19328 | opp_overlap 1377163 1377162 1377173, overlap 1377167 ATTGGATAATAAAAA GGTCGGC ATAT GCCGACC TTTTTATTAGAATTT TERM 1649 1377173 - 1377190 + T 100 -12.7 -5.11112 | opp_overlap 1377173 1377167, overlap 1377163 1377162 ATTGGATAATAAAAA GGTCGGC ATAT GCCGACC TTTTTATTAGAATTT Spea_1141 1377854 - 1377216 - | hypothetical protein TERM 1650 1377756 - 1377767 + g 70 -2.2 -5.00616 | AATGACTACGCCAAA CAGG TCCA TCTG TTTTTTACCAGCAGC Spea_1142 1378189 - 1379205 + | threonine aldolase TERM 1651 1379259 - 1379230 - T 100 -12.3 -4.70659 | opp_overlap 1379236, overlap 1379236 TTTGATAGCTAAAAA TAAAAACCTAGGC AATA GCCTAGGTTTTTT GTTTTTAGCCCTAAA TERM 1652 1379236 - 1379253 + T 100 -11.3 -5.93252 | opp_overlap 1379230 1379236 AGCTAAAAATAAAAA CCTAGGC AATA GCCTAGG TTTTTTGTTTTTAGC TERM 1653 1379253 - 1379236 - T 100 -11.3 -5.63236 | opp_overlap 1379236, overlap 1379230 AGCTAAAAATAAAAA CCTAGGC AATA GCCTAGG TTTTTTGTTTTTAGC TERM 1654 1379294 - 1379275 - T 89 -12.2 -3.57144 | opp_overlap 1379275 GTTTTTAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 1655 1379275 - 1379294 + T 89 -12.2 -3.44319 | opp_overlap 1379275 GTTTTTAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 1656 1379684 - 1379709 + T 77 -6.1 -4.55798 | opp_overlap 1379676 1379686 1379687, overlap 1379679 1379686 1379687 TATAACAGATGGGCA AAGCCACCTTC TTCA GAAGGTGGATC TTTTACTTTAGGCTA TERM 1657 1379686 - 1379707 + T 77 -8.7 -3.88396 | opp_overlap 1379676 1379686 1379687, overlap 1379679 1379684 1379687 TAACAGATGGGCAAA GCCACCTTC TTCA GAAGGTGGA TCTTTTACTTTAGGC TERM 1658 1379707 - 1379686 - T 72 -8.7 -3.60948 | opp_overlap 1379679 1379686 1379684 1379687, overlap 1379676 1379687 TAACAGATGGGCAAA GCCACCTTC TTCA GAAGGTGGA TCTTTTACTTTAGGC TERM 1659 1379687 - 1379706 + T 82 -12.2 -2.92314 | opp_overlap 1379676 1379686 1379687, overlap 1379679 1379686 1379684 AACAGATGGGCAAAG CCACCTTC TTCA GAAGGTGG ATCTTTTACTTTAGG TERM 1660 1379706 - 1379687 - T 81 -12.2 -2.76087 | opp_overlap 1379679 1379687 1379686 1379684, overlap 1379676 1379686 AACAGATGGGCAAAG CCACCTTC TTCA GAAGGTGG ATCTTTTACTTTAGG Spea_1143 1380616 - 1379729 - | hypothetical protein Spea_1144 1382351 - 1380744 - | alkaline phosphatase Spea_1145 1383940 - 1382441 - | alkaline phosphatase TERM 1661 1384184 - 1384151 - R 100 -15.5 -4.4267 | opp_overlap 1384156 1384160 1384175 1384179 TTGCAAAAGGGAAAA TACAACCAAGGCTCA ATAA TGAGCCTTTGTTGTA GAATAAAGTTTTATA TERM 1662 1384156 - 1384179 + r 75 -9.6 -3.3334 | opp_overlap 1384151, overlap 1384160 1384175 AAAGGGAAAATACAA CCAAGGCTCA ATAA TGAGCCTTTG TTGTAGAATAAAGTT TERM 1663 1384160 - 1384175 + r 86 -9 -4.32177 | opp_overlap 1384151, overlap 1384156 GGAAAATACAACCAA GGCTCA ATAA TGAGCC TTTGTTGTAGAATAA Spea_1146 1384452 - 1384243 - | hypothetical protein Spea_1147 1385515 - 1385120 - | hypothetical protein TERM 1664 1386009 - 1385976 - R 72 -8.9 -3.42395 | opp_overlap 1385983, overlap 1385974 1385981 1385983 TTTATGACGGAAATA GACAAGAGGGGGA AGCTGTTG TCCCCCTTTTGCC CGAGTGTGAGCTGGA TERM 1665 1386011 - 1386035 + r 79 -9.3 -3.85817 | overlap 1386014 GTCCCCCTTTTGCCC GAGTGTGAGCT GGA AGCTCACGATC TTTATCAAACGAAGT TERM 1666 1386014 - 1386032 + r 70 -9.6 -2.70946 | overlap 1386011 CCCCTTTTGCCCGAG TGTGAGCT GGA AGCTCACG ATCTTTATCAAACGA TERM 1667 1386040 - 1386054 + r 71 -7.2 -3.85165 | AGCTCACGATCTTTA TCAAAC GAA GTTTGA TTTCCCTTTCAGGTA TERM 1668 1386113 - 1386081 - R 82 -6.3 -4.90778 | GGTAGGCAAACAAAA TGTTGCTGGCGCTAT ACC AAAATACCAGCAACA TTCAGCAAGCTAATT Spea_1148 1387428 - 1386127 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1669 1387831 - 1387801 - R 93 -11.2 -4.18494 | overlap 1387802 CAGCGGGATTTAAAA GCGGCATGCTCTAG GGA CTAAAACATGCCGT CAATCATTAGAGCTT TERM 1670 1387830 - 1387802 - R 100 -14.7 -3.10775 | overlap 1387801 AGCGGGATTTAAAAG CGGCATGCTCTAG GGA CTAAAACATGCCG TCAATCATTAGAGCT Spea_1149 1388200 - 1387838 - | hypothetical protein TERM 1671 1389667 - 1389649 - g 100 -13.2 -4.99861 | opp_overlap 1389646 GATGAAGTACAAAAA CGCCTAGT TGT ACTAGGCG ACCGTTTCGGTGTCG Spea_1150 1388659 - 1389813 + | RND family efflux transporter MFP subunit TERM 1672 1391370 - 1391360 - g 71 -6.8 -4.11216 | GGCTTATCGCCAAAA GAGG CAA CCTC TAAGGCGATGAAAGA TERM 1673 1393038 - 1393062 + G 93 -14.2 -3.62275 | TGGTTATTGCTACTG GCGCGGGGGC GGGTA GCCGCCGCGC TTTAGGCTACTCGGT Spea_1151 1390070 - 1393201 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1674 1393238 - 1393258 + T 90 -9 -5.07652 | opp_overlap 1393238 TAGTTGTAGAACTAA GGCCTGCT TTGAT AGTAGGCC TTTTATTTTCAGCCC TERM 1675 1393388 - 1393407 + T 95 -13.6 -3.3858 | opp_overlap 1393388, overlap 1393377 GCCAGAAAGGAAAAA GCCCACTC CGAG GAGTGGGC TTCTAAGCTTGCTTT TERM 1676 1393407 - 1393388 - T 100 -13.6 -5.04601 | opp_overlap 1393377 1393388 GCCAGAAAGGAAAAA GCCCACTC CGAG GAGTGGGC TTCTAAGCTTGCTTT Spea_1152 1394844 - 1393696 - | iron-containing alcohol dehydrogenase Spea_1153 1395291 - 1394863 - | hypothetical protein Spea_1154 1395959 - 1395486 - | hypothetical protein Spea_1155 1399552 - 1396442 - | acriflavin resistance protein TERM 1677 1398074 - 1398052 - G 76 -9.2 -3.65902 | opp_overlap 1398046 TTGATTCTACCCAAA CGTTAAAACG ATT CGGTTTAACG TTCGCCTTGAGAATT Spea_1156 1400665 - 1399553 - | RND family efflux transporter MFP subunit Spea_1157 1402186 - 1401104 - | metallophosphoesterase TERM 1678 1401956 - 1401974 + g 79 -7.4 -4.52703 | ATCTGTGAGGATTGG CTCTGGCA AGT TGCCACAG TTTTCTGGTCGTTTA Spea_1158 1403432 - 1402275 - | acyltransferase 3 TERM 1679 1402691 - 1402677 - G 84 -5 -5.30686 | opp_overlap 1402677 1402679, overlap 1402679 AACACCCACAAAAAA CATTGG GAT CCAATA TTTATCGATAAACGG TERM 1680 1403452 - 1403474 + r 87 -4.9 -5.3798 | overlap 1403454 TTGTTGTCCGTTAGT CACTTTCAA ATCTG TTGAAAGCG TTTTTATTATTGTTA TERM 1681 1403662 - 1403647 - R 100 -10.4 -5.4833 | opp_overlap 1403647 TGAGGCAATAAAAAA GGAGGC CGAG GCCTCC TTTCTATAGGTGTGA TERM 1682 1403647 - 1403662 + r 86 -10.4 -4.07868 | opp_overlap 1403647 TGAGGCAATAAAAAA GGAGGC CGAG GCCTCC TTTCTATAGGTGTGA Spea_1159 1405350 - 1403683 - | putative ABC transporter ATP-binding protein TERM 1683 1404847 - 1404834 - G 76 -8.1 -4.03078 | GTAGCAGACGACAAA TCGCC ACAC GGCGA CGCTCACCACCCGAT TERM 1684 1405593 - 1405573 - H 72 -9.7 -3.06183 | GGGATTGTGATCGAA TGCGCTGTA GAA TACCGCGCA ACCCTATTACAAGAC TERM 1685 1405651 - 1405640 - g 72 -3 -5.055 | overlap 1405650 GTAATGCTGAAAAAA GATA TGAA TATC GCGGATTATGATCCA Spea_1160 1405628 - 1406884 + | glycine hydroxymethyltransferase TERM 1686 1406914 - 1406933 + F 100 -13.6 -5.03994 | opp_overlap 1406906 TAAGTTAGACTCCAA TGGCCGCA TCTA TGCGGCCA TTTTTGTATGTAAAG Spea_1161 1407071 - 1407520 + | transcriptional regulator NrdR TERM 1687 1407533 - 1407555 + F 91 -13.4 -3.18264 | opp_overlap 1407530 TAAACTACGCAACCG GGGCTAAGCG CTG CGCCTAGCCC TTCATCAATCGAACA Spea_1162 1407589 - 1408710 + | riboflavin biosynthesis protein RibD TERM 1688 1409054 - 1409073 + G 71 -7.2 -4.18018 | gap 1 TGGATGATAGACAGT TTCG-TGGC CAA GCCATCGAA TTTTGGCTAAGCCCA Spea_1163 1408714 - 1409379 + | riboflavin synthase subunit alpha Spea_1164 1409517 - 1410620 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1689 1410624 - 1410634 + F 76 -6.8 -4.41633 | opp_overlap 1410622, overlap 1410627 ATTGCAGATTAAATT CCTG CCT CAGG TTGTTTTTCAGCCTG TERM 1690 1410627 - 1410653 + F 95 -14.5 -3.18467 | opp_overlap 1410622, overlap 1410624 GCAGATTAAATTCCT GCCTCAGGTTG TTTTT CAGCCTGAGGC TTAAATTCACACTTT TERM 1691 1410779 - 1410767 - g 72 -6.3 -4.21607 | TTTAGGTAAGATAAA TGAAC GTA GTTCA AGGTAATATCGAATC TERM 1692 1410813 - 1410801 - g 71 -3.3 -4.75174 | TATCGAATCGAAAAA CGCCA AAG TTGCG ATCGTAGTTTCACGT Spea_1165 1410766 - 1411242 + | 6,7-dimethyl-8-ribityllumazine synthase Spea_1166 1411257 - 1411664 + | transcription antitermination protein NusB TERM 1693 1411665 - 1411694 + F 90 -12.3 -3.50393 | opp_overlap 1411671, overlap 1411671 GCACGCAATAAGTAG TAGAAACGGCATC TTCG GATGCCGTTTTTG TTATATCCGCTAGGG TERM 1694 1411688 - 1411671 - f 90 -11.3 -4.03696 | opp_overlap 1411665 1411671 AATAAGTAGTAGAAA CGGCATC TTCG GATGCCG TTTTTGTTATATCCG TERM 1695 1411671 - 1411688 + F 100 -11.3 -5.24796 | opp_overlap 1411671, overlap 1411665 AATAAGTAGTAGAAA CGGCATC TTCG GATGCCG TTTTTGTTATATCCG TERM 1696 1411742 - 1411759 + F 75 -5.5 -4.75174 | GTATTCCCACTTTGA GCAAGCC TTAT GGCTTCC TTTTTCGCTTGAGTG Spea_1167 1411838 - 1412797 + | thiamine-monophosphate kinase TERM 1697 1412879 - 1412932 + G 91 -8.7 -4.93296 | CGCTGGGTTTTGGCT CAGGCTTAGCAGCCAAAGCGCCGGG TACT TTTGGCACCTTGGCCGCTATTCCTG TTTTTCTGCTGATGG Spea_1168 1412797 - 1413291 + | phosphatidylglycerophosphatase A TERM 1698 1413326 - 1413354 + T 100 -13.3 -4.54477 | opp_overlap 1413331, overlap 1413331 ATAGTTAGCAACATA AAAAATGCAGAGC TTA GCTCTGCATTTTG TTTTATGGGTTTTAG TERM 1699 1413349 - 1413331 - T 100 -13.2 -5.49569 | opp_overlap 1413326 1413331 TAGCAACATAAAAAA TGCAGAGC TTA GCTCTGCA TTTTGTTTTATGGGT TERM 1700 1413331 - 1413349 + T 100 -13.2 -5.19275 | opp_overlap 1413331, overlap 1413326 TAGCAACATAAAAAA TGCAGAGC TTA GCTCTGCA TTTTGTTTTATGGGT TERM 1701 1413401 - 1413428 + T 79 -10.6 -3.24188 | opp_overlap 1413404, overlap 1413404 1413406 AAATTAACTTAGTAG CAACTCTTTGGC GTTA GCCAAGGTGTTG TTGGTGATGGTGTCG Spea_1169 1415050 - 1413389 - | recombination and repair protein TERM 1702 1414956 - 1414986 + g 72 -10.4 -2.75963 | overlap 1414955 ATCGATTTACCCGCA CCGGTTTCACCAGT AAT ACTGGTCATGCCGG CTTTAAAGTCGAGCT TERM 1703 1415112 - 1415071 - R 90 -11.1 -4.25104 | opp_overlap 1415082 1415086, overlap 1415073 1415088 TGTCCTTTATCAAAA CACTGTATGGTTAAACAGT ATAT ACTGTTTATTCATACAGTA AATACCCTGTTGGTA TERM 1704 1415110 - 1415073 - R 88 -11.5 -3.73042 | opp_overlap 1415082 1415086, overlap 1415071 1415088 TCCTTTATCAAAACA CTGTATGGTTAAACAGT ATAT ACTGTTTATTCATACAG TAAATACCCTGTTGG TERM 1705 1415297 - 1415277 - R 81 -5.5 -5.1356 | opp_overlap 1415268 GTGTAGGAATAAAAA TTCGGTTTT TCA AAAAACGAA AAGGGGAGGCTAGCC TERM 1706 1415420 - 1415400 - R 74 -6.1 -4.34402 | overlap 1415401 1415402 GGCGCCAGACCAAAA TCGTGAGCT TCC AGCTCACAC TCGGCCAAGAAGGGG TERM 1707 1415419 - 1415401 - R 73 -9.6 -3.2032 | overlap 1415400 1415402 GCGCCAGACCAAAAT CGTGAGCT TCC AGCTCACA CTCGGCCAAGAAGGG TERM 1708 1415418 - 1415402 - R 76 -10.9 -2.51871 | overlap 1415401 1415400 CGCCAGACCAAAATC GTGAGCT TCC AGCTCAC ACTCGGCCAAGAAGG TERM 1709 1415710 - 1415727 + r 79 -8.5 -4.08064 | GAATGGGTGTTTCCT GTGAGTT TTGT AACTCAC TTTTGCCCCAAAGTT Spea_1170 1417217 - 1416201 - | transposase IS116/IS110/IS902 family protein TERM 1710 1417119 - 1417103 - G 75 -2.9 -5.1356 | TTTGAGCAAGAAAAA GCACTAA CTC TTTGCGC TTAATTATCTTCTTT Spea_1171 1417740 - 1420280 + | putative transcriptional regulator TERM 1711 1420429 - 1420454 + T 100 -11.9 -4.82901 | overlap 1420430 1420444 CTCATCTGAGTCACT AGCGCTAGAGT CAGT ACTCTAGCGCA TTTTTGTCCAAAAAC TERM 1712 1420430 - 1420453 + T 100 -15.4 -3.49419 | overlap 1420429 1420444 TCATCTGAGTCACTA GCGCTAGAGT CAGT ACTCTAGCGC ATTTTTGTCCAAAAA TERM 1713 1420574 - 1420601 + T 82 -10.6 -3.53012 | overlap 1420578 GTTGAAGAAATAGTC GTAATGCCCACA TGGA TGTGGGCATAGC TTTCGCGGGGCAGGA TERM 1714 1420578 - 1420597 + T 81 -12.2 -2.64155 | overlap 1420574 AAGAAATAGTCGTAA TGCCCACA TGGA TGTGGGCA TAGCTTTCGCGGGGC TERM 1715 1420766 - 1420780 + T 70 -8.6 -3.34192 | GCGCCACGACTTTTA TCAAGC ACC GCTTGA TTGCTTAAAACGCTT TERM 1716 1421068 - 1421044 - T 71 -9.4 -2.80344 | overlap 1421043 GTGTCATTTAAGAAG GCTCAATTCC TAAGG GAAATTGAGC TGATAAGGGAGCACT Spea_1172 1421907 - 1421146 - | pirin domain-containing protein Spea_1173 1423005 - 1422022 - | putative glutathione S-transferase Spea_1174 1423517 - 1423068 - | DoxX family protein TERM 1717 1423730 - 1423720 - H 82 -4 -5.40072 | CTTGGCTTAAAAAAA TGAA GGG TTCA ACAATGAATACACCT TERM 1718 1423915 - 1423936 + G 79 -8.1 -4.24342 | gap 1, opp_overlap 1423905 AAGGACGGCGAGCGG TGCTTACACC CGC GG-GTAAGCA TTTATTAGTGGAAGG Spea_1175 1423734 - 1424648 + | LysR family transcriptional regulator TERM 1719 1424772 - 1424788 + T 73 -7.3 -3.98913 | TTAGAGGGATTATCA GCGTTTA TCC TAAGCGC TTATTTAACTCTGCC Spea_1176 1426411 - 1424789 - | response regulator receiver protein Spea_1177 1428723 - 1426483 - | Hpt sensor hybrid histidine kinase TERM 1720 1427795 - 1427776 - G 87 -10 -4.32177 | opp_overlap 1427788 1427790 CCAGTCGACAATAAA CTCGAGCC CTTT GACTCGAG CGCCGGCTTCGAGTG Spea_1178 1428958 - 1429860 + | LysR family transcriptional regulator TERM 1721 1429885 - 1429911 + T 83 -10.9 -3.62572 | opp_overlap 1429885 ACCTGTTACAAAAAA GCGCACAAGGT GATTA ACCTTATGCGC TTTAGAGTGATCGTG TERM 1722 1429911 - 1429885 - T 100 -13.1 -5.24531 | opp_overlap 1429885 ACCTGTTACAAAAAA GCGCACAAGGT GATTA ACCTTATGCGC TTTAGAGTGATCGTG Spea_1179 1430562 - 1429957 - | hypothetical protein Spea_1180 1433353 - 1430564 - | hybrid sensory histidine kinase BarA Spea_1181 1433451 - 1434788 + | 23S rRNA 5-methyluridine methyltransferase TERM 1723 1435826 - 1435794 - g 71 -10.7 -2.67423 | opp_overlap 1435800, overlap 1435793 1435800 TGGAAGAAGATGAAG GGCAAACAGCTCA AATTTGA TGAGCTGTTTGAC GTGCGGGCCGTGCGT TERM 1724 1436152 - 1436137 - g 73 -7.6 -4.07687 | ATTGGCTGCGCAAAA TCTTGC AGTG GCAAGA AGATGTGGCCGAAAG TERM 1725 1436772 - 1436762 - g 84 -8.2 -4.58283 | CAAGTCGGTTAAAAA GGCC AAA GGCC AAGTTGAGGTTAGCG Spea_1182 1435005 - 1437212 + | (p)ppGpp synthetase I, SpoT/RelA TERM 1726 1437243 - 1437224 - f 100 -13.6 -3.86372 | opp_overlap 1437224 GTAACTTAAAGATAA CGGCAACC ATAA GGTTGCCG TTTTTATATGTAATT TERM 1727 1437224 - 1437243 + F 100 -13.6 -5.06505 | opp_overlap 1437224 GTAACTTAAAGATAA CGGCAACC ATAA GGTTGCCG TTTTTATATGTAATT TERM 1728 1437478 - 1437464 - g 74 -11.4 -2.85351 | overlap 1437466 GTCGCCGATACCATA GAGCGC ATG GCGCTC GATGAACTGCCTGAT TERM 1729 1437783 - 1437773 - g 71 -6.8 -4.10363 | ATAAAAATCCAGAAA CGAG TGG CTCG GGTTGGATTTGACTG Spea_1183 1437311 - 1438114 + | nucleoside triphosphate pyrophosphohydrolase Spea_1184 1438230 - 1439870 + | CTP synthetase TERM 1730 1439906 - 1439880 - f 82 -10.8 -3.47941 | opp_overlap 1439881, overlap 1439881 GACTAATTACGACAA CGCCGCTTCCAT TTA ATGGGAGCGGCT TTTTTGTTTCTAGCG TERM 1731 1439905 - 1439881 - f 93 -14.3 -2.68282 | opp_overlap 1439881, overlap 1439880 ACTAATTACGACAAC GCCGCTTCCAT TTA ATGGGAGCGGC TTTTTTGTTTCTAGC TERM 1732 1439881 - 1439905 + F 100 -16.5 -5.72622 | opp_overlap 1439880 1439881 ACTAATTACGACAAC GCCGCTTCCAT TTA ATGGGAGCGGC TTTTTTGTTTCTAGC TERM 1733 1440580 - 1440605 + G 80 -12.7 -3.08464 | opp_overlap 1440579 1440576 CATAGCCTAAAGAGC GTGCTTAAGTC TAAA GGCTTAAGCAC TTCAGTGGGTGATGA Spea_1185 1439995 - 1441290 + | phosphopyruvate hydratase TERM 1734 1441328 - 1441311 - f 100 -12.7 -4.72486 | opp_overlap 1441311 TATAAACTTTAAAAA GGCCACC ACTC GGTGGCC TTTTTTGTTGTACTA TERM 1735 1441311 - 1441328 + F 100 -12.7 -5.58179 | opp_overlap 1441311 TATAAACTTTAAAAA GGCCACC ACTC GGTGGCC TTTTTTGTTGTACTA Spea_1186 1441381 - 1441677 + | septum formation initiator TERM 1736 1442203 - 1442226 + G 75 -3 -5.21709 | opp_overlap 1442203 GTTTGCCGCGAAAAG CTGTGGCATG CACT CACACCGCAG TTTTTTCCTGTGCAG Spea_1187 1441729 - 1442424 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Spea_1188 1442477 - 1442956 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 1737 1443803 - 1443790 - g 70 -2.4 -5.08824 | CGTTTAGCTAAAAAA GACA TACAAC TGTC GGCGCCATTATGGGG Spea_1189 1443055 - 1444119 + | tRNA pseudouridine synthase D TruD Spea_1190 1444116 - 1444868 + | stationary-phase survival protein SurE Spea_1191 1445346 - 1445981 + | protein-L-isoaspartate O-methyltransferase Spea_1192 1446069 - 1446959 + | peptidase M23B Spea_1193 1447036 - 1448004 + | RpoD family RNA polymerase sigma factor TERM 1738 1448069 - 1448048 - T 100 -14.5 -5.42975 | opp_overlap 1448048 TGAGATAAATAAAAA GCGCAGTTG AAAT CAACTGCGC TTTTTTTGTGCCTAT TERM 1739 1448048 - 1448069 + T 100 -14.5 -5.65177 | opp_overlap 1448048 TGAGATAAATAAAAA GCGCAGTTG AAAT CAACTGCGC TTTTTTTGTGCCTAT Spea_1194 1450696 - 1448117 - | DNA mismatch repair protein TERM 1740 1450598 - 1450587 - G 78 -5.8 -4.87273 | AAGAGCTCATAAAAA TCGC CCAT GCGA TAAAAGAGCAACATA Spea_1195 1451017 - 1452084 + | recombinase A TERM 1741 1452534 - 1452547 + G 85 -6.7 -5.10077 | opp_overlap 1452527 TATCAAACCACTGCA GCACT GCGA AGTGC TTTTTTGGAATATTT TERM 1742 1453183 - 1453169 - g 73 -10 -3.42699 | ATTTATGCAGTATAA CCGTCA AGC TGACGG TGAGATGAAGCCACT TERM 1743 1454443 - 1454430 - g 76 -2.3 -5.27938 | opp_overlap 1454431, overlap 1454431 ACGGCCAAAGAAAAA GGTGC TATG GCACT GTTTGGTGAGAAGTA Spea_1196 1452516 - 1455143 + | alanyl-tRNA synthetase TERM 1744 1455187 - 1455171 - f 73 -7.9 -3.80419 | opp_overlap 1455172, overlap 1455172 ACGAGATATTAAGAA GCGCCCT TTA AGGGCGT TTTTTTATGGCATAA TERM 1745 1455172 - 1455186 + F 100 -11.4 -5.626 | opp_overlap 1455171 1455172 CGAGATATTAAGAAG CGCCCT TTA AGGGCG TTTTTTTATGGCATA TERM 1746 1455186 - 1455172 - f 80 -11.4 -2.87529 | opp_overlap 1455172, overlap 1455171 CGAGATATTAAGAAG CGCCCT TTA AGGGCG TTTTTTTATGGCATA Spea_1197 1455613 - 1455810 + | carbon storage regulator, CsrA TERM 1747 1455856 - 1455840 - f 80 -10.9 -3.39749 | opp_overlap 1455840 TTAAGAATTTTAGAA GCCAGTT TTT AACTGGC TTTTTTATTTTCTGG TERM 1748 1455840 - 1455856 + F 100 -10.9 -5.86976 | opp_overlap 1455840 TTAAGAATTTTAGAA GCCAGTT TTT AACTGGC TTTTTTATTTTCTGG TERM 1749 1456079 - 1456063 - f 82 -10.9 -3.452 | opp_overlap 1456063 GGTAAATATGTAGAA GCCAGTT AAT AACTGGC TTTTTATTTTCTGGC TERM 1750 1456063 - 1456079 + F 100 -10.9 -5.54907 | opp_overlap 1456063 GGTAAATATGTAGAA GCCAGTT AAT AACTGGC TTTTTATTTTCTGGC TERM 1751 1456306 - 1456290 - f 82 -10.9 -3.452 | opp_overlap 1456290 GGTAAATATGTAGAA GCCAGTT AAT AACTGGC TTTTTTATTTTCAGG TERM 1752 1456290 - 1456306 + F 100 -10.9 -5.79595 | opp_overlap 1456290 GGTAAATATGTAGAA GCCAGTT AAT AACTGGC TTTTTTATTTTCAGG TERM 1753 1457479 - 1457463 - f 100 -12.3 -5.08601 | opp_overlap 1457463 TCATTCGAACAAAAA CCGCAAC ACT GTTGCGG TTTTTTGTCCTCAGA TERM 1754 1457463 - 1457479 + F 100 -12.3 -5.31275 | opp_overlap 1457463 TCATTCGAACAAAAA CCGCAAC ACT GTTGCGG TTTTTTGTCCTCAGA TERM 1755 1457817 - 1457864 + F 95 -13.8 -3.76379 | gap 1, opp_overlap 1457823 1457833, overlap 1457823 1457833 CCTTCTCCGCCATTC ATAC-CATACAAAAAAACCGCAC CTA GTGCGGTTTTTTTGTATCTGTAA TTTAATAAGCTCTTC TERM 1756 1457823 - 1457857 + F 100 -21.8 -3.07227 | opp_overlap 1457823 1457833, overlap 1457817 1457833 CCGCCATTCATACCA TACAAAAAAACCGCAC CTA GTGCGGTTTTTTTGTA TCTGTAATTTAATAA TERM 1757 1457857 - 1457823 - f 100 -21.8 -2.64616 | opp_overlap 1457823 1457817 1457833, overlap 1457833 CCGCCATTCATACCA TACAAAAAAACCGCAC CTA GTGCGGTTTTTTTGTA TCTGTAATTTAATAA TERM 1758 1457833 - 1457847 + F 100 -11.4 -5.77988 | opp_overlap 1457823 1457833, overlap 1457823 1457817 TACCATACAAAAAAA CCGCAC CTA GTGCGG TTTTTTTGTATCTGT TERM 1759 1457847 - 1457833 - f 100 -11.4 -5.74122 | opp_overlap 1457833 1457823 1457817, overlap 1457823 TACCATACAAAAAAA CCGCAC CTA GTGCGG TTTTTTTGTATCTGT TERM 1760 1457921 - 1457933 + F 70 -7.7 -3.65529 | opp_overlap 1457916 TAGCGTAATATTACA GCCTA GAT TAGGC TTTAAATAAGACTAT TERM 1761 1458918 - 1458937 + G 70 -2.2 -4.97405 | CATTGGGGATCATGA TACTAG GCATGTCA CTAGTA TTTGTTTTTCTAAGT Spea_1198 1458872 - 1459117 + | sodium pump decarboxylase, gamma subunit Spea_1199 1459138 - 1460949 + | pyruvate carboxylase subunit B Spea_1200 1460958 - 1462088 + | sodium ion-translocating decarboxylase, beta subunit TERM 1762 1462107 - 1462132 + F 93 -5.5 -5.5604 | gap 1, opp_overlap 1462107 ATGCCTTTTGAAAAA TCCCGTATTCAG TAT TTGA-TGCGGGA TTTTTTATTAATTGA Spea_1201 1462229 - 1463170 + | LysR family transcriptional regulator TERM 1763 1463327 - 1463337 + F 74 -4 -5.04175 | TACAAGTTTTCTCAG TAGA CCC TCTA TTTTTATCTCGTTAG Spea_1202 1463402 - 1464508 + | agmatine deiminase Spea_1203 1464553 - 1465638 + | extracellular solute-binding protein Spea_1204 1465721 - 1466593 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Spea_1205 1466898 - 1466713 - | hypothetical protein TERM 1764 1466983 - 1466954 - R 100 -13.7 -4.21402 | opp_overlap 1466955 1466961, overlap 1466955 1466961 ATTGAAAAGTATAAA TTAAAAAGGCCGC AATT GCGGCCTTTTTAT TCAGTAAATGTCTGA TERM 1765 1466955 - 1466982 + r 100 -17.2 -3.09491 | opp_overlap 1466954 1466955 1466961, overlap 1466961 TTGAAAAGTATAAAT TAAAAAGGCCGC AATT GCGGCCTTTTTA TTCAGTAAATGTCTG TERM 1766 1466982 - 1466955 - R 100 -17.2 -3.11757 | opp_overlap 1466955 1466961, overlap 1466954 1466961 TTGAAAAGTATAAAT TAAAAAGGCCGC AATT GCGGCCTTTTTA TTCAGTAAATGTCTG TERM 1767 1466961 - 1466976 + r 100 -11.8 -5.10461 | opp_overlap 1466955 1466954 1466961, overlap 1466955 AGTATAAATTAAAAA GGCCGC AATT GCGGCC TTTTTATTCAGTAAA TERM 1768 1466976 - 1466961 - R 100 -11.8 -5.05505 | opp_overlap 1466961 1466955, overlap 1466955 1466954 AGTATAAATTAAAAA GGCCGC AATT GCGGCC TTTTTATTCAGTAAA Spea_1206 1468251 - 1467001 - | sodium:dicarboxylate symporter Spea_1207 1468994 - 1471831 + | peptidase M16 domain-containing protein TERM 1769 1471855 - 1471891 + F 100 -13.2 -4.1552 | gap 1, opp_overlap 1471860 GGTAGGCCATATATC CGA-AAGATGGTGCCAT GGAT ATGGCACCATCTCATCG TTTATTAGGCAGGTG TERM 1770 1471885 - 1471860 - f 100 -16.3 -3.65425 | opp_overlap 1471855 GCCATATATCCGAAA GATGGTGCCAT GGAT ATGGCACCATC TCATCGTTTATTAGG Spea_1208 1472008 - 1473576 + | glutamate--cysteine ligase Spea_1209 1473579 - 1474019 + | hypothetical protein Spea_1210 1474143 - 1474760 + | hypothetical protein TERM 1771 1474777 - 1474796 + F 100 -10 -5.45802 | opp_overlap 1474776 TAAATTTTCAATTAG GCCTCTAC ATCT GTAGGGGC TTTTTGTTTTCAGGC TERM 1772 1475217 - 1475235 + F 76 -8.9 -3.76402 | GGGATAATTGCGCCA CAGGCTT GGGGG AAGCCTG TTTACTAAGTGCGCT Spea_1211 1475309 - 1475812 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1773 1475844 - 1475870 + F 100 -9.5 -5.30686 | opp_overlap 1475844, overlap 1475867 CCTGTCAATATCAAA TGCTGCCTAGA TACTT TCTAGGTGGCA TTTTTTATGCCTGTT Spea_1212 1475962 - 1476579 + | ECF subfamily RNA polymerase sigma-24 factor Spea_1213 1476569 - 1477135 + | hypothetical protein TERM 1774 1477193 - 1477178 - T 83 -11.8 -3.24423 | opp_overlap 1477178, overlap 1477173 GCTAACAATATCTAA GCCCGC ATTT GCGGGC TTTTTTTTGGGTTAT TERM 1775 1477178 - 1477193 + T 100 -11.8 -5.87688 | opp_overlap 1477178 1477173 GCTAACAATATCTAA GCCCGC ATTT GCGGGC TTTTTTTTGGGTTAT Spea_1214 1477711 - 1477295 - | hypothetical protein TERM 1776 1479290 - 1479302 + G 80 -6.2 -4.84642 | CCGATATTGTCTGGT CGGC AGACA GCCG TTTTATTGCTTTAAC Spea_1215 1477930 - 1481208 + | peptidase S41 TERM 1777 1481247 - 1481219 - f 86 -11.7 -3.37612 | opp_overlap 1481210 1481219 TTTAATCGTAAGTAA CGCCAATCTCCAC TTT GTCGAGGTTGGCG TTAAATAGCAGTTTT TERM 1778 1481219 - 1481247 + F 93 -13.9 -3.07575 | opp_overlap 1481219, overlap 1481210 TTTAATCGTAAGTAA CGCCAATCTCCAC TTT GTCGAGGTTGGCG TTAAATAGCAGTTTT Spea_1216 1481454 - 1482605 + | secretion protein HlyD family protein TERM 1779 1482737 - 1482747 + G 79 -8.2 -4.31433 | CAGCCATTTGGGCCT GGCC GTT GGCC TTTATTGTGCCGGTA TERM 1780 1483467 - 1483448 - g 74 -3.6 -5.00616 | gap 1, overlap 1483449 1483452 TCTTTGGCCAAAAAA TCTATGCCG ACC CGGCA-AAA GCCCCTCTCTATGCG Spea_1217 1482595 - 1483665 + | hypothetical protein Spea_1218 1483957 - 1484541 + | putative lipoprotein TERM 1781 1484604 - 1484549 - T 100 -29.6 -3.18728 | opp_overlap 1484568 1484595, overlap 1484553 1484568 ATGGCTAACACTTAA TTTATCAGGCACAAAAAAAGCTAGGT TATC ACCTAGCTTTTTTTGTGCCTGATAGA GCCGCTCTAACAGCG TERM 1782 1484600 - 1484553 - T 100 -30.4 -2.57067 | opp_overlap 1484568 1484595, overlap 1484549 1484568 CTAACACTTAATTTA TCAGGCACAAAAAAAGCTAGGT TATC ACCTAGCTTTTTTTGTGCCTGA TAGAGCCGCTCTAAC TERM 1783 1484585 - 1484568 - T 100 -9.9 -5.64274 | opp_overlap 1484568, overlap 1484553 1484549 TCAGGCACAAAAAAA GCTAGGT TATC ACCTAGC TTTTTTTGTGCCTGA TERM 1784 1484568 - 1484585 + T 100 -9.9 -5.64274 | opp_overlap 1484568 1484553 1484549 TCAGGCACAAAAAAA GCTAGGT TATC ACCTAGC TTTTTTTGTGCCTGA TERM 1785 1484595 - 1484620 + T 73 -6.9 -4.15396 | gap 1, opp_overlap 1484553 1484549 1484605 CCTAGCTTTTTTTGT GC-CTGATAGAG CCG CTCTAACAGCGC TTATTTGATTTCAAA Spea_1219 1485064 - 1484621 - | OsmC family protein Spea_1220 1485868 - 1485341 - | hypothetical protein TERM 1786 1486012 - 1485976 - R 90 -7.4 -5.23316 | opp_overlap 1485966 1485977, overlap 1485968 1485977 TATTAGAGCAAAAAA TGCCTTTTGCCCTA ACTTAAACG TAAGGCAAAAGGCT TATCGATGCTGTGAG TERM 1787 1485977 - 1486011 + r 70 -8.7 -3.38768 | opp_overlap 1485968 1485976 1485977, overlap 1485966 ATTAGAGCAAAAAAT GCCTTTTGCCCTA ACTTAAACG TAAGGCAAAAGGC TTATCGATGCTGTGA TERM 1788 1486011 - 1485977 - R 83 -10.9 -3.72905 | opp_overlap 1485966 1485977, overlap 1485968 1485976 ATTAGAGCAAAAAAT GCCTTTTGCCCTA ACTTAAACG TAAGGCAAAAGGC TTATCGATGCTGTGA Spea_1221 1486444 - 1486118 - | hypothetical protein Spea_1222 1488091 - 1486448 - | PepSY-associated TM helix domain-containing protein Spea_1223 1488406 - 1488095 - | hypothetical protein Spea_1224 1488993 - 1489349 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 1789 1489417 - 1489390 - T 100 -14.8 -3.98649 | opp_overlap 1489390 GACAATAGATAATAA GCCCCCGCTACC TAAC GGTGACGGGGGC TTTTTTTGACCGTTT TERM 1790 1489390 - 1489417 + T 100 -14.8 -5.4477 | opp_overlap 1489390 GACAATAGATAATAA GCCCCCGCTACC TAAC GGTGACGGGGGC TTTTTTTGACCGTTT Spea_1225 1491382 - 1489454 - | potassium efflux system protein TERM 1791 1490433 - 1490419 - G 75 -10 -3.50853 | CGGCCTTAATCAGAA TGACCC CAA GGGTCA TTGCCATCACTGGGC Spea_1226 1492005 - 1491385 - | NAD(P)H dehydrogenase (quinone) TERM 1792 1491825 - 1491808 - G 74 -7 -4.33928 | opp_overlap 1491802 1491793 1491810 CAGCGGAAACATAAA GACCAC TATGTC GTGGTC TCTGAGTCTTTGTTG Spea_1227 1492366 - 1493577 + | NnrS family protein TERM 1793 1494649 - 1494625 - g 79 -4.3 -5.17054 | overlap 1494628 1494647 ACAAGAGCGAAAAAA CCATTATCAAG TCC CTTGAAAACAG CAAAGCTAAAATTGA Spea_1228 1493670 - 1495079 + | nitrite reductase (cytochrome; ammonia-forming) TERM 1794 1495147 - 1495168 + F 100 -8.7 -5.82036 | opp_overlap 1495146 1495147 TGGCTTAAGTTAAAG GCTCTAAGG TCCT CCTTTGAGC TTTTTTCTTTATTGT Spea_1229 1495344 - 1495832 + | hypothetical protein Spea_1230 1495878 - 1496930 + | AraC family transcriptional regulator Spea_1231 1497064 - 1499076 + | beta-lactamase domain-containing protein TERM 1795 1499109 - 1499128 + T 82 -8.5 -4.17762 | overlap 1499120 GGAGCTATGATGATT GGGCGTC ATAGCA GGCGCCC TTGTTTTCGAGGCTA TERM 1796 1499193 - 1499179 - T 73 -7.2 -3.9693 | CATCGACCTAAACAA TCAAAC TTC GTTTGA TAGCAAAGACTATAC TERM 1797 1499372 - 1499314 - T 100 -19.9 -3.34244 | opp_overlap 1499317 1499326, overlap 1499310 1499315 CACGCTATAAATACA TCCCTGTAGACACGGCCATGA-CGTCCAT GTC ATGGACGGTCACGGCCGTGTCTACACTG- AGTTAGAAAAGCATA TERM 1798 1499372 - 1499315 - T 100 -25.9 -2.60065 | gap 1, opp_overlap 1499317 1499326, overlap 1499310 1499314 ACGCTATAAATACAT CCCTGTAGACACGGCCATGA-CGTCCAT GTC ATGGACGGTCACGGCCGTGTCTACACTG AGTTAGAAAAGCATA TERM 1799 1499317 - 1499370 + T 100 -24.9 -2.52464 | gap 1, opp_overlap 1499310 1499314 1499315, overlap 1499326 GCTATAAATACATCC CTGTAGACACGGCCATGA-CGTCCAT GTC ATGGACGGTCACGGCCGTGTCTACAC TGAGTTAGAAAAGCA TERM 1800 1499326 - 1499361 + T 100 -17 -2.9006 | gap 1, opp_overlap 1499314 1499315, overlap 1499317 ACATCCCTGTAGACA CGGCCATGA-CGTCCAT GTC ATGGACGGTCACGGCCG TGTCTACACTGAGTT TERM 1801 1499660 - 1499646 - T 79 -10 -3.57629 | CAATAATTTACATAA CACCTG CAT CAGGTG CGGGAAATGCTTGTC Spea_1232 1500542 - 1499742 - | hypothetical protein Spea_1233 1501386 - 1500535 - | hypothetical protein TERM 1802 1500917 - 1500935 + g 72 -3.2 -4.94672 | TGTGCAGACGCTTTC TTCATGTT GTT GATATGAA TTTTTGGTCTTGTTT TERM 1803 1502244 - 1502259 + r 72 -4.6 -4.76041 | opp_overlap 1502245, overlap 1502245 TTCGAAGCTAAAAAA ACCACC TTGC GGTGGC TTTTTAGTGACTGTC TERM 1804 1502258 - 1502245 - R 100 -8.1 -5.53288 | opp_overlap 1502244 1502245 TCGAAGCTAAAAAAA CCACC TTGC GGTGG CTTTTTAGTGACTGT Spea_1234 1504550 - 1502313 - | acyl-CoA dehydrogenase TERM 1805 1502505 - 1502517 + g 78 -6.2 -4.66833 | TGGCTTAAACGTCTT GGCG CGAAT CGCC TTTTTGACCTTGGCA TERM 1806 1504881 - 1504850 - R 100 -20.4 -3.60792 | opp_overlap 1504850 CGTGGAAGTTGTAAA CATACACTAGGGCT ATAT AGCCCTAGTGTATG TTTGAGAAAGGTATG TERM 1807 1504850 - 1504881 + r 100 -20.4 -3.54129 | opp_overlap 1504850 CGTGGAAGTTGTAAA CATACACTAGGGCT ATAT AGCCCTAGTGTATG TTTGAGAAAGGTATG Spea_1235 1506181 - 1504994 - | ribosome-associated GTPase TERM 1808 1506572 - 1506587 + r 70 -3.2 -4.97402 | gap 1, overlap 1506557 1506575 GCTATGGCCGAGAGT CGTGGCC TAT GGCC-TG TTTTTCTGAATTTTA TERM 1809 1506575 - 1506585 + r 75 -8.2 -4.08693 | overlap 1506557 1506572 ATGGCCGAGAGTCGT GGCC TAT GGCC TGTTTTTCTGAATTT TERM 1810 1506740 - 1506764 + r 73 -7.3 -4.08887 | opp_overlap 1506740, overlap 1506754 ATTATGGGGTAATAA GATTATCTC GACGAGA GAGATAATC TTTCATTTAGATGGT Spea_1236 1507320 - 1506793 - | putative lipoprotein Spea_1237 1509491 - 1507332 - | hypothetical protein Spea_1238 1509927 - 1511111 + | glycosyl transferase group 1 TERM 1811 1511442 - 1511466 + G 75 -2.7 -5.15969 | overlap 1511443 TCTTATCAAGTACAC CTTTCCCGACT GGC AGGCGGGGGAA TTTTTTAGCTTAACA TERM 1812 1512988 - 1513002 + G 83 -6.4 -5.03314 | GAGTTTGTGACTATT CAGTCG GAC CGATTG TTTTTTGAAGATGAC Spea_1239 1511101 - 1513311 + | extracellular solute-binding protein Spea_1240 1513360 - 1514181 + | hypothetical protein Spea_1241 1515216 - 1514218 - | hypothetical protein TERM 1813 1515169 - 1515191 + g 76 -7.8 -4.19953 | ACAGATAAGTAGGCT CACTAAGC TTAATCT GCTTAGTG TTTTGGAATTCGATA TERM 1814 1515565 - 1515577 + H 79 -5.5 -4.8743 | TCGCGCTCCACATTT GAGTC ATA GGCTC TTTATTTATTTTAAA Spea_1242 1515607 - 1516335 + | hypothetical protein Spea_1243 1516340 - 1517866 + | diguanylate phosphodiesterase TERM 1815 1517910 - 1517887 - T 93 -9.6 -4.99035 | opp_overlap 1517887 CTATCGAGACAAAAA GCCTGAGTGT TATT ACACTTAGGC TTTTTGTTGTCTGGC TERM 1816 1517887 - 1517910 + T 100 -11.8 -5.24796 | opp_overlap 1517887 CTATCGAGACAAAAA GCCTGAGTGT TATT ACACTTAGGC TTTTTGTTGTCTGGC Spea_1244 1518595 - 1518035 - | CBS domain-containing protein Spea_1245 1518901 - 1519629 + | nitroreductase A Spea_1246 1519846 - 1520373 + | PEBP family protein TERM 1817 1520562 - 1520547 - g 71 -10.4 -2.71924 | overlap 1520546 CATCTGGCGTGAAAG CCCTGC TTTG GCAGGG AGAAACCCTAGTATT Spea_1247 1520438 - 1521247 + | AraC family transcriptional regulator TERM 1818 1521608 - 1521624 + F 100 -12.3 -5.64274 | TCACCCATTCTTAAG GCTCGCT ATT AGCGAGC TTTTTTTGTGCCTCA Spea_1248 1522011 - 1522352 + | alkylphosphonate utilization operon protein PhnA TERM 1819 1522393 - 1522407 + T 100 -7.1 -5.64274 | opp_overlap 1522393 1522391 ATTGATATGAAAAGA CCTGC CTAGT GCAGG TTTTTTTGTAGCTGA TERM 1820 1522584 - 1522618 + T 88 -11.5 -3.64049 | opp_overlap 1522585, overlap 1522585 CAGCAGATACAAAAA AGCCGCTAAATCCGT CTGGT AGGGATTTAGCGGCC TTTGAAGGTTATTGC TERM 1821 1522585 - 1522617 + T 95 -15 -2.77947 | opp_overlap 1522585, overlap 1522584 AGCAGATACAAAAAA GCCGCTAAATCCGT CTGGT AGGGATTTAGCGGC CTTTGAAGGTTATTG TERM 1822 1522617 - 1522585 - T 100 -15 -5.43414 | opp_overlap 1522584 1522585 AGCAGATACAAAAAA GCCGCTAAATCCGT CTGGT AGGGATTTAGCGGC CTTTGAAGGTTATTG Spea_1249 1523641 - 1522829 - | AraC family transcriptional regulator Spea_1250 1523743 - 1524276 + | alkylhydroperoxidase Spea_1251 1524295 - 1524732 + | hypothetical protein TERM 1823 1524749 - 1524770 + T 86 -8 -4.86613 | TCAAGGGTTTTATTA GGCGTCAT TATATT ATGGCGCC TTTGTTTTGATTTTA Spea_1252 1525516 - 1524818 - | hypothetical protein Spea_1253 1525654 - 1527147 + | hypothetical protein Spea_1254 1527312 - 1527938 + | transposase TERM 1824 1527975 - 1527947 - T 86 -4.5 -5.42131 | overlap 1527951 CAATTAGACAAAAAA TAAAGGAGGACGT TAA AGGTCCTCCGATA ACAAAAACAACAAGA TERM 1825 1527971 - 1527951 - T 93 -9.7 -5.16969 | overlap 1527947 TAGACAAAAAATAAA GGAGGACGT TAA AGGTCCTCC GATAACAAAAACAAC Spea_1255 1528553 - 1527993 - | integrase family protein Spea_1256 1529100 - 1528687 - | hypothetical protein Spea_1257 1529620 - 1529279 - | hypothetical protein Spea_1258 1530096 - 1529734 - | hypothetical protein Spea_1259 1530632 - 1530156 - | DNA repair protein RadC TERM 1826 1530425 - 1530402 - G 80 -6 -5.0133 | opp_overlap 1530402 1530420 TACGGTGCCAAAAAA CAGCTCATTG AATT CAATCAGCCG ATGTTGGTTATCGAG Spea_1260 1530827 - 1531030 + | phage transcriptional regulator, AlpA TERM 1827 1531044 - 1531066 + T 91 -13.5 -2.75074 | opp_overlap 1531044, overlap 1531041 GATAGACTGCATAAA TGGAGAGCC CAAAA GGCTCTCCA TGATATTGAGCTAAA TERM 1828 1531066 - 1531044 - T 100 -14.2 -3.91858 | opp_overlap 1531044 1531041 GATAGACTGCATAAA TGGAGAGCCC AAA AGGCTCTCCA TGATATTGAGCTAAA TERM 1829 1531284 - 1531313 + T 100 -17.9 -3.88731 | opp_overlap 1531284 TGTAGAAAGTAAAAA GCAGCTGGTGGCC TTTA GTCCACCAGCTGC TTTACTGTGCTGTTA TERM 1830 1531313 - 1531284 - T 100 -17.9 -5.04601 | opp_overlap 1531284 TGTAGAAAGTAAAAA GCAGCTGGTGGCC TTTA GTCCACCAGCTGC TTTACTGTGCTGTTA Spea_1261 1531761 - 1531543 - | hypothetical protein TERM 1831 1531848 - 1531834 - R 73 -8.6 -3.72576 | opp_overlap 1531842 CCTGCGTTGACGAAA GCTTAC TTG GTAAGC CCCTAACTTCTTAGA Spea_1262 1533223 - 1532360 - | hypothetical protein TERM 1832 1532795 - 1532815 + g 100 -8.3 -6.0427 | opp_overlap 1532795 TCCATCTTTAAGTGA CGTGTAGCT AAT ATCTACACG TTTTTTTTCTCTAAT Spea_1263 1533379 - 1534656 + | hypothetical protein Spea_1264 1534646 - 1535215 + | hypothetical protein Spea_1265 1535209 - 1538001 + | hypothetical protein TERM 1833 1538565 - 1538592 + G 75 -2.6 -5.23943 | AAGTTGATTGATTGG CTATCGATGCCT GAAC GGGCGCCAATAG TTTATTTTTTTGCTG Spea_1266 1537998 - 1538876 + | hypothetical protein TERM 1834 1539812 - 1539777 - g 85 -6.3 -5.10461 | gap 1, opp_overlap 1539777 GTTAGCGAACAAAAA GAGTGAAACTCAT-GT AGATG ACGATGAGCTGCACTC TGATATAGCACATCA Spea_1267 1539298 - 1540548 + | hypothetical protein Spea_1268 1540535 - 1542358 + | hypothetical protein Spea_1269 1542400 - 1545645 + | helicase domain-containing protein TERM 1835 1545786 - 1545815 + F 100 -13.7 -4.09864 | opp_overlap 1545784, overlap 1545787 GTCCAATCAAGGATT TTTAGGGGGACTT TTTA AAGTCCCCCTAGG TTTTAAAAGCTCAAT TERM 1836 1545787 - 1545814 + F 100 -15 -3.05597 | opp_overlap 1545784, overlap 1545786 TCCAATCAAGGATTT TTAGGGGGACTT TTTA AAGTCCCCCTAG GTTTTAAAAGCTCAA TERM 1837 1546029 - 1546000 - f 100 -15.1 -4.18018 | opp_overlap 1546008, overlap 1546018 CCTCCTTATTTAAAA GCACCAGATAGTC AAAA GGCTATCTGGTGC TAGCTGTGCCGTATA Spea_1270 1546309 - 1547529 + | DNA-cytosine methyltransferase Spea_1271 1547568 - 1551101 + | helicase domain-containing protein Spea_1272 1551112 - 1555173 + | hypothetical protein Spea_1273 1555239 - 1558805 + | helicase domain-containing protein TERM 1838 1559480 - 1559465 - g 71 -7.6 -3.97602 | CAACACACTGACAAA GCTGAA ACAC TTCAGC GTGGGGCAACTAACT TERM 1839 1559654 - 1559644 - g 80 -6.8 -4.58395 | GCTACTTGTTAAAAA GCTC CCC GAGC TAGAAAGTTATGCCA TERM 1840 1560167 - 1560180 + G 75 -6.7 -4.51097 | ACTGAACAGGATATT CGTGA CAAG TCACG TTTTATAGTCCTTCA Spea_1274 1558802 - 1560625 + | hypothetical protein TERM 1841 1561104 - 1561093 - g 80 -7.2 -4.62069 | TCTCTAGTTCAAAAA GCCC ATAA GGGC ATCAGAGTTCGTTTT TERM 1842 1561275 - 1561256 - g 75 -6.4 -4.49389 | overlap 1561258 AGGTTATAAGTAAAA GGGGTCAT CAAT ATGACCGC AAGCTCCACGCAAAG Spea_1275 1560622 - 1561461 + | hypothetical protein Spea_1276 1561552 - 1562637 + | hypothetical protein Spea_1277 1562630 - 1563025 + | hypothetical protein TERM 1843 1563012 - 1563035 + T 85 -9 -4.26189 | CAAATAAGTCGGTAG CCCTTTATTG TTGA TAATAAAGGG TTTTAAGCTTTGTGC Spea_1278 1563494 - 1563144 - | hypothetical protein Spea_1279 1564083 - 1563727 - | XRE family transcriptional regulator TERM 1844 1564469 - 1564484 + G 83 -4 -5.39755 | overlap 1564471 AGTCGGCTATCATCC TGCTGT AAAT ACAGTA TTTTTTATAATTGTG Spea_1280 1564202 - 1564696 + | hypothetical protein Spea_1281 1565973 - 1564741 - | integrase family protein TERM 1845 1565251 - 1565273 + g 72 -2.7 -5.02323 | overlap 1565254 CATAGTGTGCAGTTG TATCTCGAT CAAGC ATCGAGTTG TTTTCTTTATACTAG TERM 1846 1565254 - 1565270 + g 78 -6.6 -4.58946 | overlap 1565251 AGTGTGCAGTTGTAT CTCGAT CAAGC ATCGAG TTGTTTTCTTTATAC TERM 1847 1566124 - 1566109 - R 100 -9 -5.65177 | opp_overlap 1566109 1566105 ACAGGCAGAAAAAAA GACGTC CTAG GACGTC TTCGTTTCTATATTT TERM 1848 1566109 - 1566124 + r 76 -9 -3.69992 | opp_overlap 1566109, overlap 1566105 ACAGGCAGAAAAAAA GACGTC CTAG GACGTC TTCGTTTCTATATTT Spea_1282 1567099 - 1566605 - | SsrA-binding protein Spea_1283 1567293 - 1567724 + | cyclase/dehydrase Spea_1284 1567721 - 1568053 + | hypothetical protein TERM 1849 1568118 - 1568092 - T 100 -11.7 -4.97402 | gap 1, opp_overlap 1568092 TAAAATGCATAAAAA TGGCGAGTTTCC TGTA GGAA-CTCGCCA TTTTTCAAGCTAATC TERM 1850 1568092 - 1568118 + T 100 -13.1 -4.60487 | opp_overlap 1568092 TAAAATGCATAAAAA TGGCGAGTTTC CTGTA GGAACTCGCCA TTTTTCAAGCTAATC Spea_1285 1568655 - 1568161 - | SmpA/OmlA domain-containing protein Spea_1286 1569121 - 1569924 + | uroporphyrin-III C/tetrapyrrole methyltransferase Spea_1287 1570060 - 1570224 + | hypothetical protein Spea_1288 1570480 - 1570692 + | hypothetical protein Spea_1289 1570703 - 1572490 + | diguanylate cyclase TERM 1851 1574608 - 1574565 - g 74 -8.2 -4.00411 | gap 1 TAAAACCCTAAATAA CCATAGCGACAGAGTG-CTGC CCG ACAGGCAGTCGGTCACCATGG ATAAGCCATTTTTAA TERM 1852 1574680 - 1574694 + G 71 -7 -4.15044 | GGTGCGTTAGCTATG GGCGGC ATG GCAGCC TTTATTCCAGCAAAA Spea_1290 1573642 - 1575306 + | malate synthase TERM 1853 1575378 - 1575392 + F 72 -8.6 -3.48276 | CTTGGTAAAAGTTTG GCTACA TCT TGTAGC TTGTGTCCCCCGCAC TERM 1854 1575401 - 1575430 + F 91 -7.8 -5.2197 | TTGTAGCTTGTGTCC CCCGCACTGTAT TCCTAC GTGCTGTGCGGG TTTTTAATTTTTGTC TERM 1855 1575482 - 1575497 + F 100 -9 -6.07627 | CTTAGTTGTGATTGG CGACTC TTCG GAGTCG TTTTTTTTTGAACAT Spea_1291 1575736 - 1577211 + | putative signal transduction protein TERM 1856 1577245 - 1577261 + T 84 -7.9 -4.67641 | opp_overlap 1577245 CCTTAAGTTGCTAAA GCACTGC CTT GCAGCGC TTTTAATTTTCGACT TERM 1857 1577261 - 1577245 - T 79 -10.1 -3.57561 | opp_overlap 1577245 CCTTAAGTTGCTAAA GCACTGC CTT GCAGCGC TTTTAATTTTCGACT Spea_1292 1577749 - 1577264 - | hypothetical protein Spea_1293 1578631 - 1577807 - | hypothetical protein TERM 1858 1577973 - 1577962 - G 73 -4.4 -4.76312 | CATAATAGCTAAAAA GTGA ATGT TCAC CGTATTGACTCGCCC Spea_1294 1579319 - 1578876 - | CopG family transcriptional regulator Spea_1295 1580022 - 1579279 - | hypothetical protein TERM 1859 1580178 - 1580202 + H 72 -4.3 -4.68103 | overlap 1580179 GTCGATACATCGTAT TCGTCAACTGT ATG ATAATTGACGG TTTTATTGCAATTGA TERM 1860 1580612 - 1580600 - g 71 -3.4 -4.7497 | GTGATGGATGAAAAA CTTC TATTT GAAG CCGTTACTCAAAAGA Spea_1296 1580588 - 1580812 + | hypothetical protein Spea_1297 1581020 - 1581322 + | NrfJ-related protein TERM 1861 1581419 - 1581384 - f 79 -8.4 -4.07535 | gap 1, opp_overlap 1581391, overlap 1581391 AACTTTTAGAAAGAA TGCTAAATGGCGTAGAC TGA GTCTACGCCATTTT-CT TTTGTGTAAAACTAC TERM 1862 1581413 - 1581391 - f 100 -16.4 -3.74841 | opp_overlap 1581391, overlap 1581384 AGAAAGAATGCTAAA TGGCGTAGAC TGA GTCTACGCCA TTTTCTTTTGTGTAA TERM 1863 1581391 - 1581413 + F 100 -16.4 -5.23292 | opp_overlap 1581391 1581384 AGAAAGAATGCTAAA TGGCGTAGAC TGA GTCTACGCCA TTTTCTTTTGTGTAA Spea_1298 1581503 - 1582003 + | GCN5-related N-acetyltransferase TERM 1864 1582615 - 1582570 - g 72 -2.7 -4.96388 | gap 1, overlap 1582572 1582573 AACTATTAAACAAAA TAGCCATAATAAAGGGGACCAA GTA CTGGTCAACTTCAGTATGG-TA AAGCCGTTAGCCTAA Spea_1299 1582088 - 1582630 + | GCN5-related N-acetyltransferase TERM 1865 1582645 - 1582684 + T 70 -8.6 -3.33399 | gap 1, opp_overlap 1582659 AAATAATCTGCTTTG TTGTGGGGGCAA-GACTGA AGT TCAGCCCTTGCCCACTCAA TTGCATTTAATTACA Spea_1300 1584473 - 1582695 - | 5'-nucleotidase TERM 1866 1584948 - 1584934 - R 100 -11.4 -5.24989 | opp_overlap 1584934 TTAGATATTAAAAAA GGGAGC CAA GCTCCC TTTTTAGTAACCAAC TERM 1867 1584934 - 1584948 + r 95 -11.4 -4.72272 | opp_overlap 1584934 TTAGATATTAAAAAA GGGAGC CAA GCTCCC TTTTTAGTAACCAAC Spea_1301 1586051 - 1584981 - | hypothetical protein TERM 1868 1585502 - 1585520 + g 74 -10.4 -3.21416 | TAACCGACAGCATCT GAGTCAAA ATC TTTGACTC TTGCTCATCAAGCTC Spea_1302 1586212 - 1587333 + | hypothetical protein TERM 1869 1587603 - 1587569 - g 72 -8.7 -3.7347 | gap 1, opp_overlap 1587575, overlap 1587575 GGCAATAGTGAACAA GCCAAAGCCAAC-CTC GATC GAGCATTGGCTTTTGC ACCCAATTTGGAAGA Spea_1303 1587365 - 1588165 + | type IV pilus biogenesis/stability protein PilW TERM 1870 1588226 - 1588240 + G 76 -7.8 -4.25104 | opp_overlap 1588208, overlap 1588208 TAGTGGATGAGCCGA CGCTCA CAC TGGGCG TTTTGCTAAAAACAG Spea_1304 1588165 - 1589130 + | hypothetical protein Spea_1305 1589152 - 1590267 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1871 1590279 - 1590305 + F 100 -8 -5.64274 | GTAACGACAATTGCA TCACAACCCTGC AGC GTGGGCTTGTGA TTTTTTTATGGCTGA TERM 1872 1590350 - 1590367 + F 85 -4.1 -5.56112 | opp_overlap 1590350 CGTTTAGTCTCGAAA CGCCT ATAATGCG AGGCG TTTTTTAATTTTTAT Spea_1306 1590407 - 1591681 + | histidyl-tRNA synthetase TERM 1873 1591905 - 1591887 - g 72 -6.6 -4.21462 | opp_overlap 1591887 1591889 ACTGAGCAGCCAAAA CACTGCCG ATA CGGCGATG TTAACTGCGGCGGAG Spea_1307 1591696 - 1592316 + | tetratricopeptide TPR_4 Spea_1308 1592328 - 1593515 + | outer membrane protein assembly complex subunit YfgL TERM 1874 1593539 - 1593563 + F 90 -8.6 -4.99435 | gap 1, opp_overlap 1593538 1593539 GTTAGACATGATAAG GCCCCTGG-AT GTGT ATGCCGGGGGC TTTTTAGTTATTAGA TERM 1875 1593947 - 1593936 - g 80 -5.8 -5.02074 | overlap 1593939 GTAGTCGTGAAAAAA CCAC TTTC GTGG TGGCCAACAAAGTTG Spea_1309 1593602 - 1595074 + | GTP-binding protein EngA TERM 1876 1595108 - 1595137 + T 93 -13.1 -3.33261 | opp_overlap 1595094 1595115, overlap 1595115 ATAAGCAAAATAGCT TAAAAAAGGAACC TCAG GGTTCCTTTTTTG TTGTAGCCGTTCAGA TERM 1877 1595130 - 1595115 - T 90 -9 -5.10077 | opp_overlap 1595108 1595115 AAATAGCTTAAAAAA GGAACC TCAG GGTTCC TTTTTTGTTGTAGCC TERM 1878 1595115 - 1595130 + T 100 -9 -5.55769 | opp_overlap 1595115, overlap 1595108 AAATAGCTTAAAAAA GGAACC TCAG GGTTCC TTTTTTGTTGTAGCC Spea_1310 1595872 - 1595153 - | hypothetical protein TERM 1879 1595966 - 1595945 - R 70 -3 -5.12474 | overlap 1595947 TAGAAGAGATAAAAA TTCAGTGA ATCATG TCACTGCA AGTAAAGTGTAAACC Spea_1311 1597005 - 1596103 - | hypothetical protein TERM 1880 1596442 - 1596459 + g 71 -6.9 -4.09739 | opp_overlap 1596432, overlap 1596444 1596457 AGCTATGAGGTTATG CCCCCAG AAAC CTGGGTG TTTTAAGGCGCTTGA TERM 1881 1596666 - 1596676 + g 80 -5.4 -5.04597 | CTGAAATATTATGGC TGAG ATA CTCA TTTTTCTCTGTGCAT TERM 1882 1597630 - 1597651 + r 75 -8.1 -4.07618 | gap 1 GTCCTCCTTGCCCGA GT-GTGAGCT AGA AGCTCACGAC TTTAGTTGTTAGACG Spea_1312 1599157 - 1597820 - | exodeoxyribonuclease VII large subunit TERM 1883 1600253 - 1600233 - g 70 -9.7 -3.04122 | overlap 1600235 GTGTACCACAAATTA CAGCGGTAT CTG ATGCCGCTG CTGCCGTTAAGCACT Spea_1313 1599278 - 1600750 + | inositol-5-monophosphate dehydrogenase TERM 1884 1600795 - 1600765 - f 100 -16.4 -2.73007 | opp_overlap 1600771, overlap 1600771 AATAGTGTTCTAAAT CTTAAAGGCGACAT ATA ATGTCGCCTTTAAA TTAAGCCAAGTAGTA TERM 1885 1600789 - 1600771 - f 95 -13.2 -3.71649 | opp_overlap 1600771, overlap 1600765 GTTCTAAATCTTAAA GGCGACAT ATA ATGTCGCC TTTAAATTAAGCCAA TERM 1886 1600771 - 1600789 + F 95 -13.2 -3.75153 | opp_overlap 1600771 1600765 GTTCTAAATCTTAAA GGCGACAT ATA ATGTCGCC TTTAAATTAAGCCAA Spea_1314 1600874 - 1602451 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1887 1602494 - 1602481 - f 80 -8.1 -4.32177 | opp_overlap 1602481 TGACTCTAGAATAAA GGTGC TTCG GCACC TTTTTTATTGGCGCT TERM 1888 1602481 - 1602494 + F 93 -8.1 -5.45652 | opp_overlap 1602481 TGACTCTAGAATAAA GGTGC TTCG GCACC TTTTTTATTGGCGCT TERM 1889 1602890 - 1602878 - g 81 -4.7 -5.24989 | CGAGAGATGAAAAAA CCGGC GCA GCAGG CACTGTGATCGACAT TERM 1890 1602890 - 1602920 + G 87 -9.9 -4.30844 | gap 2 AAACCGGCGCAGCAG GCACTGTGATCGACA TAG TG-CGA-CACAGTGC TTTTAATCATCAGGT Spea_1315 1602580 - 1603071 + | CMP/dCMP deaminase zinc-binding Spea_1316 1604925 - 1603486 - | lytic transglycosylase catalytic TERM 1891 1604053 - 1604067 + g 84 -8.6 -4.58395 | AAGCTTACGCCAGTC TATGCC CTC GGCATA TTTTTCAAACGTGGC TERM 1892 1604890 - 1604868 - G 70 -9.1 -3.40403 | opp_overlap 1604867 CTTGCTCCACGACAA CCTTCTGGC AGCCA GCCAGTAGG GTGATATAGCATAGA TERM 1893 1605073 - 1605097 + H 72 -4.3 -4.8048 | overlap 1605070 1605075 TGGGAATTTCCTCTT GAGAGTTGAAA ACT TTTCAAGTCGC TTTTTCCTGTACAGG TERM 1894 1606504 - 1606493 - g 78 -5.8 -4.88736 | GACCATGTACAAAAA GGTG AGAT CACC GTTGGCGCTAAGCTA Spea_1317 1605218 - 1609099 + | phosphoribosylformylglycinamidine synthase TERM 1895 1609136 - 1609120 - f 76 -10.9 -2.62616 | TTACTGCTGATATGA CGTTAGC CTT GCTAACG AAAAGCCCCTATTTT TERM 1896 1609141 - 1609158 + F 100 -11.3 -5.81412 | opp_overlap 1609141 CCTTGCTAACGAAAA GCCCCTA TTTT TAGGGGC TTTTTTTTGCCTGAA TERM 1897 1609158 - 1609141 - f 93 -11.3 -4.4078 | opp_overlap 1609141 CCTTGCTAACGAAAA GCCCCTA TTTT TAGGGGC TTTTTTTTGCCTGAA TERM 1898 1609397 - 1609374 - f 100 -15.4 -5.46276 | opp_overlap 1609372 1609371 AACAGACATAAAAAA GCCCTCCTTA TTAC TAAGGAGGGC CGCTTTGCGCTAACA Spea_1318 1610325 - 1611881 + | cytochrome bd ubiquinol oxidase subunit I Spea_1319 1611897 - 1613036 + | cytochrome d ubiquinol oxidase, subunit II Spea_1320 1613052 - 1613168 + | cyd operon protein YbgT TERM 1899 1613217 - 1613196 - T 85 -11.5 -3.36581 | opp_overlap 1613198, overlap 1613198 TAAATGGTTAAGTAA GAGCCCCGC AAAT GCGGGGCTT TTTGTTTTTGAAGAA TERM 1900 1613215 - 1613198 - T 95 -14.1 -3.24597 | opp_overlap 1613198, overlap 1613196 AATGGTTAAGTAAGA GCCCCGC AAAT GCGGGGC TTTTTGTTTTTGAAG TERM 1901 1613198 - 1613215 + T 100 -14.1 -5.61881 | opp_overlap 1613196 1613198 AATGGTTAAGTAAGA GCCCCGC AAAT GCGGGGC TTTTTGTTTTTGAAG TERM 1902 1613316 - 1613292 - T 70 -5.5 -4.39407 | opp_overlap 1613300, overlap 1613293 TCAAAGAAGGTAAAA GCCGAACGGCC TGC GGCCTTACGGA ACGTTCGCAGGCTCA TERM 1903 1613315 - 1613293 - T 70 -9 -3.2256 | opp_overlap 1613300, overlap 1613292 CAAAGAAGGTAAAAG CCGAACGGCC TGC GGCCTTACGG AACGTTCGCAGGCTC Spea_1321 1614243 - 1613671 - | hypothetical protein TERM 1904 1614401 - 1614424 + r 86 -11.1 -3.94381 | opp_overlap 1614401 ATTGTAAATATAAAA GGCAACAGT CATCTC ACTGTTGCC TTTATGGACTTATCT TERM 1905 1614424 - 1614401 - R 93 -11.1 -4.79451 | opp_overlap 1614401 ATTGTAAATATAAAA GGCAACAGT CATCTC ACTGTTGCC TTTATGGACTTATCT Spea_1322 1616469 - 1614466 - | methyl-accepting chemotaxis sensory transducer TERM 1906 1616105 - 1616132 + g 73 -4.2 -4.77157 | GTCGCGTTGCCGCCA GTAAGGTTGG AGTAACGA TCGACCTTAC TTTTTGATGCGTTGA TERM 1907 1616187 - 1616201 + g 73 -4.2 -4.76213 | CTGGAGTCTCTACTC CCATCA CTC TGACGG TTTTATTCGGTTTAT TERM 1908 1616441 - 1616455 + g 83 -6.4 -5.00765 | AGTAAGCCTATTTGT TTGGCT ATT GGCCAA TTTTTATAATTCATT TERM 1909 1616934 - 1616906 - g 100 -14.7 -5.67063 | opp_overlap 1616910 TGGACTAGAAAAAAA TGAAGTGCCCACC AGT GATGAGCACTTCA TCGAATTAAAAGCCG Spea_1323 1616760 - 1617014 + | hypothetical protein Spea_1324 1620114 - 1616998 - | acriflavin resistance protein TERM 1910 1618329 - 1618310 - G 83 -6.3 -5.06816 | overlap 1618312 AGGTTGTAATAAAAA GAGGGCG CATTGC CGCCCAC GACCCAATCAATGCG TERM 1911 1618327 - 1618312 - G 73 -7.5 -4.16307 | overlap 1618310 GTTGTAATAAAAAGA GGGCG CATTGC CGCCC ACGACCCAATCAATG TERM 1912 1619590 - 1619565 - G 71 -9.7 -3.24825 | overlap 1619563 CGAGCTGAACCAAGA TCTCTTCGGCC GGCT GGCCATAGAGA TTGACAAAATCGGTG TERM 1913 1619803 - 1619788 - G 70 -9 -3.34895 | opp_overlap 1619790 1619793, overlap 1619792 GGCATCGGCAATTAA GTCACG CGCC CGTGAC CATACCGGCGCTGTT Spea_1325 1621232 - 1620120 - | RND family efflux transporter MFP subunit TERM 1914 1621285 - 1621335 + H 79 -9.8 -3.74693 | opp_overlap 1621318, overlap 1621290 1621299 1621319 AGGGTAAATAATTTG TTAAGCTGGACTGTCTAGTCTAGT GCG ACAAAACTAGACTGTCCAGTCTAG TTTGATGAAATAGAC TERM 1915 1621290 - 1621330 + H 95 -14.1 -3.03701 | opp_overlap 1621318, overlap 1621285 1621299 1621319 AAATAATTTGTTAAG CTGGACTGTCTAGTCTAGT GCG ACAAAACTAGACTGTCCAG TCTAGTTTGATGAAA TERM 1916 1621335 - 1621318 - H 85 -8.5 -4.38712 | opp_overlap 1621290 1621285 1621299 1621319 TCTAGTGCGACAAAA CTAGACT GTCC AGTCTAG TTTGATGAAATAGAC TERM 1917 1621476 - 1621488 + G 77 -3.3 -5.252 | GGGCAGATCTTACAG GCTGC GAA GGAGC TTTTTTGTGAGCATG TERM 1918 1621762 - 1621746 - g 72 -8.7 -3.65902 | GTTACCGTATTTAAA GCCTGTG TTT CACAAGC AGACACTCATCCAGA Spea_1326 1621419 - 1622036 + | TetR family transcriptional regulator TERM 1919 1622079 - 1622049 - T 71 -9.9 -2.86747 | opp_overlap 1622048 1622057, overlap 1622057 TAGTGATTAGAATCA TAAAAAAAGGAGC GAATA GCTCCTTTTTTTG ATCATCTTTTTGGCT TERM 1920 1622071 - 1622057 - T 100 -7.1 -5.73339 | opp_overlap 1622048 1622057, overlap 1622049 AGAATCATAAAAAAA GGAGC GAATA GCTCC TTTTTTTGATCATCT TERM 1921 1622057 - 1622071 + T 100 -7.1 -5.56568 | opp_overlap 1622057 1622049, overlap 1622048 AGAATCATAAAAAAA GGAGC GAATA GCTCC TTTTTTTGATCATCT Spea_1327 1622674 - 1622099 - | hypothetical protein Spea_1328 1623185 - 1622706 - | hypothetical protein Spea_1329 1623485 - 1624237 + | methyltransferase type 11 TERM 1922 1624386 - 1624413 + F 73 -9.4 -3.22388 | opp_overlap 1624386 1624407, overlap 1624390 TCTATCGCACAAAAA TTAATTATTACC AGCA GGTAATAGTTAA TTACTAAATTAGATG TERM 1923 1624413 - 1624386 - f 85 -7.2 -4.85599 | opp_overlap 1624386 1624390, overlap 1624407 TCTATCGCACAAAAA TTAATTATTACC AGCA GGTAATAGTTAA TTACTAAATTAGATG Spea_1330 1624590 - 1625843 + | sodium:dicarboxylate symporter Spea_1331 1626781 - 1625951 - | fatty acid hydroxylase Spea_1332 1628784 - 1627615 - | hypothetical protein Spea_1333 1629092 - 1629721 + | hypothetical protein Spea_1334 1629722 - 1630168 + | hypothetical protein TERM 1924 1630487 - 1630475 - T 72 -9.1 -3.37975 | ACCTAGGATCTAGAA GTCGC AAC GCGAC GCCCTCGAAGTGACA Spea_1335 1630981 - 1630556 - | FlgN family protein Spea_1336 1631395 - 1631078 - | anti-sigma-28 factor, FlgM TERM 1925 1631338 - 1631369 + g 100 -19 -4.16371 | CACCTTTCGCATTCA TACCCATGCCAATA CGAG TATTGGCATGGGTA TTTACTTGTTTAATA Spea_1337 1632266 - 1631493 - | flagellar basal body P-ring biosynthesis protein FlgA Spea_1338 1632477 - 1633397 + | response regulator receiver modulated CheW protein TERM 1926 1634259 - 1634234 - g 79 -8.3 -4.24404 | opp_overlap 1634237, overlap 1634237 AGGCAAAGCGGAAAA TACTGCGGCAA TTTG CTGCCGCATTA AATCCTAACGGCATT Spea_1339 1633537 - 1634370 + | MCP methyltransferase, CheR-type TERM 1927 1634419 - 1634402 - f 90 -11.3 -4.06055 | opp_overlap 1634402 ACTCTGTAAAGCAAA CGCGTCT CTCT AGACGCG TTTTTTGTTTCTGAC TERM 1928 1634402 - 1634419 + F 100 -11.3 -5.72622 | opp_overlap 1634402 ACTCTGTAAAGCAAA CGCGTCT CTCT AGACGCG TTTTTTGTTTCTGAC Spea_1340 1634536 - 1634934 + | flagellar basal body rod protein FlgB TERM 1929 1635126 - 1635102 - g 77 -9.3 -3.8901 | gap 1 GCCGAAATGAGTAAA GCGCAGCAGC ATCAAA GC-GCTGCGC AATCGGTGGCAGTTA Spea_1341 1634937 - 1635353 + | flagellar basal body rod protein FlgC Spea_1342 1635379 - 1636191 + | flagellar basal body rod modification protein Spea_1343 1636277 - 1637638 + | flagellar hook protein FlgE TERM 1930 1637649 - 1637677 + F 81 -11.7 -2.57985 | opp_overlap 1637648 1637653 1637656, overlap 1637656 1637665 GATAAGCGTTAAAAG CTAAGAAGGGCGG ACT CCGTCCTTCTAGG TCGCTTCGCTTCTAG TERM 1931 1637673 - 1637653 - f 80 -11.1 -3.37091 | opp_overlap 1637649 1637656 1637665, overlap 1637648 1637656 AGCGTTAAAAGCTAA GAAGGGCGG ACT CCGTCCTTC TAGGTCGCTTCGCTT TERM 1932 1637656 - 1637670 + F 72 -9.2 -3.3785 | opp_overlap 1637653 1637648 1637656, overlap 1637649 1637665 GTTAAAAGCTAAGAA GGGCGG ACT CCGTCC TTCTAGGTCGCTTCG TERM 1933 1638018 - 1638037 + F 93 -7.9 -5.5074 | opp_overlap 1638017 1638018 TCTTTCGCGAATAAG CCAGAAG CTGAGT CTTCTGG TTTTTTATTGCCTTC Spea_1344 1638295 - 1639038 + | flagellar basal body rod protein FlgF Spea_1345 1639049 - 1639837 + | flagellar basal body rod protein FlgG Spea_1346 1639881 - 1640534 + | flagellar basal body L-ring protein Spea_1347 1640574 - 1641668 + | flagellar basal body P-ring protein Spea_1348 1641697 - 1642788 + | peptidoglycan hydrolase TERM 1934 1643972 - 1643959 - g 72 -8.1 -3.70674 | opp_overlap 1643958 CTATGAGCTAAAAGA TGCCG CCAG CGGCA ATATTACGCCGCTGA TERM 1935 1644385 - 1644408 + G 72 -10.4 -2.85621 | gap 1, overlap 1644384 TACCTTCGAGATTGA TTCTACCGCAG CGA CTGCGG-AGAA GTTTACCTTCGACTT Spea_1349 1642832 - 1644754 + | flagellar hook-associated protein FlgK Spea_1350 1644839 - 1646041 + | flagellar hook-associated protein FlgL Spea_1351 1646348 - 1647532 + | flagellin domain-containing protein TERM 1936 1647683 - 1647650 - f 100 -17.5 -4.3467 | opp_overlap 1647650 AGCGTCACAGGAAAA GCAACAGCAAGACCC AAGT GGGCCTAGCTGTTGC TTTTTTATTTGCATG TERM 1937 1647650 - 1647683 + F 100 -15.3 -5.65927 | opp_overlap 1647650 AGCGTCACAGGAAAA GCAACAGCAAGACCC AAGT GGGCCTAGCTGTTGC TTTTTTATTTGCATG TERM 1938 1648148 - 1648134 - f 90 -3.6 -5.89947 | TAAATTCAAAAAAAA GTCTAA AGC TTAAAC CTCCTCTGCCGTTAT Spea_1352 1648279 - 1649460 + | flagellin domain-containing protein TERM 1939 1649516 - 1649553 + F 95 -13.5 -3.61356 | opp_overlap 1649522, overlap 1649519 1649522 GTTTAGCTAATTGGA TAATAAGGGGAGAGGCG GTAA CGTCTCTCCCCTTGCTG TTTAAAATCAGTGAT TERM 1940 1649519 - 1649550 + F 100 -17.4 -2.62792 | opp_overlap 1649522, overlap 1649516 1649522 TAGCTAATTGGATAA TAAGGGGAGAGGCG GTAA CGTCTCTCCCCTTG CTGTTTAAAATCAGT TERM 1941 1649547 - 1649522 - f 100 -14.7 -3.82191 | opp_overlap 1649519 1649516 1649522 CTAATTGGATAATAA GGGGAGAGGCG GTAA CGTCTCTCCCC TTGCTGTTTAAAATC TERM 1942 1649522 - 1649547 + F 100 -16.9 -3.46285 | opp_overlap 1649522, overlap 1649519 1649516 CTAATTGGATAATAA GGGGAGAGGCG GTAA CGTCTCTCCCC TTGCTGTTTAAAATC TERM 1943 1649752 - 1649740 - g 82 -7.7 -4.68846 | overlap 1649751 AGGAACAAATTAAAA GCTTG AAT CAAGC CATGCTAAAAGCAGA TERM 1944 1649778 - 1649764 - g 70 -10 -3.0879 | overlap 1649755 1649751 1649763 1649766 AAGCCATGCTAAAAG CAGAGC CAA GCTCTG AACAACGTGGGCTAG Spea_1353 1649673 - 1650146 + | flagellar protein FlaG protein Spea_1354 1650241 - 1651602 + | flagellar hook-associated 2 domain-containing protein Spea_1355 1651749 - 1652126 + | hypothetical protein Spea_1356 1652133 - 1652534 + | flagellar protein FliS TERM 1945 1652582 - 1652599 + F 86 -7.7 -4.83615 | GCCTGTTGTTTTATA GGAGTGT TAAC GCACTCC TTTTTGTCACCCGTC TERM 1946 1652983 - 1653004 + G 76 -7.9 -4.3208 | opp_overlap 1652982 1652985 1652987, overlap 1652987 GAGACGTACACTAAG CAGACGCGC TTTC GCGCGATTG TTTTACCTTCTGAGA TERM 1947 1652987 - 1653000 + G 71 -9.5 -3.15395 | opp_overlap 1652985 1652982 1652987, overlap 1652983 CGTACACTAAGCAGA CGCGC TTTC GCGCG ATTGTTTTACCTTCT TERM 1948 1653000 - 1652987 - g 70 -9.5 -2.95521 | opp_overlap 1652987 1652983, overlap 1652985 1652982 CGTACACTAAGCAGA CGCGC TTTC GCGCG ATTGTTTTACCTTCT Spea_1357 1652848 - 1654281 + | sigma-54 dependent trancsriptional regulator TERM 1949 1654530 - 1654549 + F 93 -7.9 -5.5074 | opp_overlap 1654530 1654529 TATTTCGCGAATAAG CCAGAAG CTGAGT CTTCTGG TTTTTTATTGCCTTC Spea_1358 1654839 - 1655954 + | PAS/PAC sensor signal transduction histidine kinase TERM 1950 1656000 - 1655982 - g 77 -11.8 -2.80252 | overlap 1655979 1655977 ACTTGTAGAAGATGA TGCTTCAC TGC GTGAAGCA CTGCTCGATACCTTG Spea_1359 1655947 - 1657299 + | two component, sigma54 specific, Fis family transcriptional regulator Spea_1360 1657813 - 1658145 + | flagellar hook-basal body complex subunit FliE Spea_1361 1658188 - 1659888 + | flagellar MS-ring protein Spea_1362 1659878 - 1660927 + | flagellar motor switch protein G TERM 1951 1661296 - 1661278 - gf 70 -8.8 -3.43492 | CTAGAGGGACTACAA GCGGCATC TGA GATGCTGC AGCGTTTCGAAAGTC Spea_1363 1660927 - 1661877 + | flagellar assembly protein FliH TERM 1952 1661972 - 1661986 + GF 79 -11.4 -2.50443 | opp_overlap 1661966, overlap 1661971 ACCTTAGAAGCGACA GGCTGC CGA GCAGCC ATTGGTAGCCTGTGC Spea_1364 1661849 - 1663189 + | flagellum-specific ATP synthase TERM 1953 1663618 - 1663606 - g 72 -6.2 -4.287 | overlap 1663607 AAATAAAGCCGAAAA GGCG CAGCT CGCC GAGTTACGCGCCGAG Spea_1365 1663244 - 1663690 + | flagellar export protein FliJ TERM 1954 1664613 - 1664596 - g 72 -5.5 -4.41548 | CGACAGCCGATAAAA CTGCGAT GAGC AGCGCAG TAACTGACACAAAGA Spea_1366 1663908 - 1665434 + | flagellar hook-length control protein Spea_1367 1665511 - 1666029 + | flagellar basal body-associated protein FliL Spea_1368 1666098 - 1667126 + | flagellar motor switch protein FliM Spea_1369 1667139 - 1667519 + | flagellar motor switch protein TERM 1955 1667648 - 1667661 + G 76 -4.5 -4.96523 | TTCGAGTATGGTTGG CGGCT TGAT AGTCG TTTTGTTGTTAATTT Spea_1370 1667547 - 1667921 + | flagellar biosynthesis protein FliO TERM 1956 1667976 - 1667991 + G 83 -10.4 -3.73775 | TTTGACTCTGTGTTT GGCTGC ACCA GCAGCC TTTGCTGAAAATGGC TERM 1957 1668015 - 1668003 - g 73 -7.7 -4.07687 | AGCCTTTGCTGAAAA TGGCA TTT TGCCA GCGGTAACAGTGTCG Spea_1371 1667932 - 1668681 + | flagellar biosynthesis protein FliP Spea_1372 1668689 - 1668958 + | flagellar biosynthetic protein FliQ Spea_1373 1668997 - 1669797 + | flagellar biosynthesis protein FliR TERM 1958 1670329 - 1670339 + G 71 -6.8 -4.09511 | GCCAGCAAAATGAGT CCAG TAG CTGG TTTTAAGCGGATGTT Spea_1374 1669939 - 1671072 + | flagellar biosynthesis protein FlhB TERM 1959 1671418 - 1671438 + G 72 -6.1 -4.23999 | overlap 1671421 GTACGCCTTTATTGG TCTTAGCCG CAC TGGCTATGA TTATTTTACCTATGC TERM 1960 1671968 - 1671954 - g 71 -7.1 -4.19276 | opp_overlap 1671953 1671957 TCAAAATTTGTAAAA GGCGA TGCGG TCGCC GGTATCTTAATTCTG Spea_1375 1671339 - 1673438 + | flagellar biosynthesis protein FlhA Spea_1376 1673450 - 1674862 + | flagellar biosynthesis regulator FlhF Spea_1377 1674867 - 1675748 + | cobyrinic acid ac-diamide synthase Spea_1378 1675741 - 1676460 + | flagellar biosynthesis sigma factor Spea_1379 1676497 - 1676904 + | response regulator receiver protein Spea_1380 1676918 - 1677655 + | chemotaxis phosphatase, CheZ TERM 1961 1678040 - 1678004 - g 100 -17.5 -3.12999 | GCAGGGCAGACTCAA TCTCCAGCTGAGCCAAC ATT GTTAGCTCAGCTGAAAA CCTTAAGCGCAGGTG Spea_1381 1677668 - 1679893 + | CheA signal transduction histidine kinase TERM 1962 1679908 - 1679932 + F 93 -9.4 -5.08824 | opp_overlap 1679908 ACACTGGTTAGCATA GGGAATAACG CAGCT TGTTATTCCC TTTTTTACATACAGC TERM 1963 1680265 - 1680281 + G 71 -7.9 -3.93262 | opp_overlap 1680265, overlap 1680257 1680259 AAGGCAACGTTAGAA GCGTTGG ATG CCGGCGC TTTAGATTTCTTACC TERM 1964 1680469 - 1680443 - g 71 -8 -3.93288 | opp_overlap 1680420, overlap 1680422 1680417 TTTCAGGCAATGAAA GAGCTCAATCTG TCA CAGATAGATCTC GCCCAATCTCAAGTT Spea_1382 1679983 - 1681164 + | chemotaxis-specific methylesterase TERM 1965 1681733 - 1681717 - g 79 -10.9 -3.45571 | opp_overlap 1681713 1681711 TCCTTCAAATATGAA TGCTGCT TTT AGCAGCA AACGTGTTCCTAAGC Spea_1383 1681157 - 1681843 + | hypothetical protein TERM 1966 1682566 - 1682579 + G 83 -9.5 -4.183 | GACAAACGTACTCGC GCGGC CTCA GCCGC TTTGTTGCAACTTAA Spea_1384 1681984 - 1682775 + | cobyrinic acid ac-diamide synthase Spea_1385 1682759 - 1683676 + | CheW protein Spea_1386 1684185 - 1684676 + | CheW protein Spea_1387 1685059 - 1685463 + | hypothetical protein Spea_1388 1686189 - 1685881 - | FlhB domain-containing protein Spea_1389 1687718 - 1686216 - | hypothetical protein Spea_1390 1688215 - 1688982 + | VacJ family lipoprotein Spea_1391 1689078 - 1690184 + | response regulator receiver protein TERM 1967 1690209 - 1690222 + T 71 -6.7 -4.00468 | AGGAGCAGGTTATAG GCTCT AGGA AGAGC TTTATAGATTGTACT TERM 1968 1690644 - 1690680 + T 91 -13.4 -3.1372 | gap 1, opp_overlap 1690644 1690651, overlap 1690646 1690651 TAATTCTCCCTTAAA CAA-AAAATGCTTCGTA TTAC TACGAAGCATTTTATTG TATTGCTAGAACCTA TERM 1969 1690680 - 1690644 - T 95 -13.4 -3.53761 | gap 1, opp_overlap 1690644 1690646 1690651, overlap 1690651 TAATTCTCCCTTAAA CAA-AAAATGCTTCGTA TTAC TACGAAGCATTTTATTG TATTGCTAGAACCTA TERM 1970 1690646 - 1690677 + T 89 -11.8 -3.71284 | opp_overlap 1690644 1690651, overlap 1690644 1690651 ATTCTCCCTTAAACA AAAAATGCTTCGTA TTAC TACGAAGCATTTTA TTGTATTGCTAGAAC TERM 1971 1690672 - 1690651 - T 100 -11.7 -5.63517 | opp_overlap 1690646 1690644 1690651, overlap 1690644 CCCTTAAACAAAAAA TGCTTCGTA TTAC TACGAAGCA TTTTATTGTATTGCT TERM 1972 1690651 - 1690672 + T 100 -11.7 -4.91285 | opp_overlap 1690651 1690644, overlap 1690646 1690644 CCCTTAAACAAAAAA TGCTTCGTA TTAC TACGAAGCA TTTTATTGTATTGCT Spea_1393 1692247 - 1690742 - | amino acid/peptide transporter TERM 1973 1691520 - 1691531 + g 74 -5.8 -4.67635 | ACTTGACCAGATTCA GCAG CTTT CTGC TTTTCTAGTTTTGCA Spea_1394 1692692 - 1693213 + | transcriptional acivator RfaH TERM 1974 1693952 - 1693940 - f 70 -9.1 -3.11134 | overlap 1693932 1693938 1693936 ACAAAATCAGACATA TCCGC AAC GCGGA TGGGCACTTTGGAAG TERM 1975 1694127 - 1694148 + F 86 -11.7 -3.2785 | overlap 1694122 1694130 TTGATGTTGTGATTT TCCTAGGTT CTAG AACCTAGGA TCTATCTTTTACCTA TERM 1976 1694130 - 1694152 + F 70 -7.8 -3.69216 | overlap 1694127 1694122 ATGTTGTGATTTTCC TAGGTTCTAG AAC CTAGGATCTA TCTTTTACCTAGGAC TERM 1977 1694647 - 1694635 - f 70 -7.7 -3.6502 | opp_overlap 1694639, overlap 1694639 GATCTTTTATTTAAA CCTAG GAC CTAGG ACCTGTCTTTCACCT TERM 1978 1696971 - 1696958 - g 80 -6.7 -4.84527 | GTTAGAGATTAAAAA GTTGG CAGA CCAAC TACGCCGTGATATCG Spea_1395 1694703 - 1697498 + | polysaccharide export protein Spea_1396 1697589 - 1697948 + | hypothetical protein Spea_1397 1698048 - 1699025 + | lipopolysaccharide biosynthesis protein Spea_1398 1699269 - 1700366 + | dTDP-glucose 4,6 dehydratase Spea_1399 1700366 - 1701238 + | glucose-1-phosphate thymidylyltransferase Spea_1400 1701235 - 1701633 + | WxcM domain-containing protein Spea_1401 1701618 - 1702076 + | GCN5-related N-acetyltransferase Spea_1402 1702078 - 1703004 + | hypothetical protein TERM 1979 1703324 - 1703297 - g 72 -5.6 -4.40358 | opp_overlap 1703283 AGCCATTTCAGAAAA TGGCTTGACT CCTGTTTT AGTCGAGCCA GACATAGATACTTTT Spea_1403 1703001 - 1704116 + | DegT/DnrJ/EryC1/StrS aminotransferase Spea_1404 1704129 - 1707101 + | hypothetical protein Spea_1405 1707098 - 1707727 + | peptidase C26 Spea_1406 1707724 - 1708515 + | nucleotidyl transferase Spea_1407 1708496 - 1709797 + | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase TERM 1980 1710930 - 1710940 + G 75 -3.2 -5.10497 | GTTATTTATCGCTAT TCCT TAT GGGA TTTTTTGGGTAGCTT TERM 1981 1711057 - 1711047 - g 74 -5.4 -4.56702 | opp_overlap 1711055 TTTGAAGCAAATAAA GCAA ATG TTGC CTATAGCAGGTATTT Spea_1408 1709809 - 1711257 + | polysaccharide biosynthesis protein Spea_1409 1711365 - 1712435 + | glycosyl transferase group 1 TERM 1982 1713197 - 1713215 + G 79 -2.5 -5.56573 | overlap 1713191 GTTCGATGTAAAAAA TAGAAGA GGGAA TCTTTTA TTTTTGTTTGTTTGT Spea_1410 1712484 - 1713719 + | hypothetical protein TERM 1983 1714438 - 1714422 - g 75 -2.9 -5.1963 | overlap 1714424 1714425 TTTAATTAACAAAAA CATCCTC CCT GAGGTTA GGGAAATCCTGATAA Spea_1411 1713709 - 1714659 + | glycosyl transferase family protein Spea_1412 1714661 - 1715428 + | glycosyl transferase family protein Spea_1413 1715486 - 1716649 + | DegT/DnrJ/EryC1/StrS aminotransferase Spea_1414 1716642 - 1717238 + | sugar transferase TERM 1984 1718771 - 1718790 + G 74 -5.6 -4.63218 | overlap 1718772 GTTTTTATTGGTGGC ACGCGTAC GATG GTGCGCGC TTTTGTTGGCACGGG TERM 1985 1718772 - 1718789 + G 70 -9.1 -3.3761 | overlap 1718771 TTTTTATTGGTGGCA CGCGTAC GATG GTGCGCG CTTTTGTTGGCACGG Spea_1416 1718393 - 1720336 + | polysaccharide biosynthesis protein CapD TERM 1986 1720353 - 1720385 + T 100 -13.6 -4.57341 | opp_overlap 1720360, overlap 1720356 1720360 TCAATTGATATATTC TGACAAAGCCAGCT CATAC AGCTGGCTTTGTTG TTTTTAGGCGAAATT TERM 1987 1720356 - 1720382 + T 100 -15.3 -4.40561 | opp_overlap 1720360, overlap 1720353 1720360 ATTGATATATTCTGA CAAAGCCAGCT CATAC AGCTGGCTTTG TTGTTTTTAGGCGAA TERM 1988 1720360 - 1720378 + T 93 -10.3 -4.76802 | opp_overlap 1720360, overlap 1720356 1720353 ATATATTCTGACAAA GCCAGCT CATAC AGCTGGC TTTGTTGTTTTTAGG TERM 1989 1720378 - 1720360 - T 84 -10.3 -3.89055 | opp_overlap 1720360 1720356 1720353 ATATATTCTGACAAA GCCAGCT CATAC AGCTGGC TTTGTTGTTTTTAGG TERM 1990 1720587 - 1720573 - T 72 -8.6 -3.59372 | TTAAGGCAAAGAAGA TCCTAG GCC CTAGGA AAGGCAGGTTCTAGG TERM 1991 1720748 - 1720725 - T 73 -9.6 -3.14468 | gap 1, opp_overlap 1720729 TCCTAGTAGACTGAA GGACGTCCTCG GAG CGAAG-CGTCC TAGAACCTTATTTTA Spea_1417 1722413 - 1720905 - | RNA-metabolising metallo-beta-lactamase TERM 1992 1723988 - 1724014 + G 79 -9.4 -4.08651 | GACGAGCTGGCCGAT GTCGCGGCTAAA GTT TATACCCGCGAC TTGTTTGGTTCGGAT Spea_1418 1722866 - 1724032 + | UDP-glucose 6-dehydrogenase TERM 1993 1724537 - 1724549 + G 100 -9.1 -5.37593 | opp_overlap 1724535 CGCCTTAAAAATTTG GAGCC TCT GGCTC TTTTTTCATTTAAAA TERM 1994 1725262 - 1725250 - g 71 -3.4 -4.77157 | TGAAGCCATTAAAAA CATG ATGGA CATG CAACCAGGTGACGTG Spea_1419 1724390 - 1725400 + | NAD-dependent epimerase/dehydratase TERM 1995 1725633 - 1725651 + F 74 -6 -4.46835 | opp_overlap 1725616, overlap 1725612 1725611 1725629 CTCCGTAGTCTGTAA GCGAAG CGTTCGT CTTCGC TTTCTTTAACCTTAT TERM 1996 1725726 - 1725751 + G 79 -2.5 -5.60993 | overlap 1725750 GTGTTGCTGTTTGAG CCGCAAGTATT TGGT GATGCTCGTGG TTTTTTTATGGAAAC Spea_1420 1725678 - 1726247 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1997 1726315 - 1726283 - T 76 -7.6 -4.28656 | AGCTAAGACGGAAAA GCGGAGCGGCCTGC GGCCT ACAGAACGCTACGC TGACGGTTAAAGCAT TERM 1998 1726516 - 1726530 + T 73 -8.6 -3.70444 | opp_overlap 1726524, overlap 1726515 ATGAGCTTGCGAACG TCCTAG AAC CTAGGA TCTTGTTTATTCAGT Spea_1421 1727736 - 1726537 - | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Spea_1422 1728245 - 1727790 - | glycerol-3-phosphate cytidylyltransferase Spea_1423 1729742 - 1728315 - | nucleotidyl transferase Spea_1424 1731924 - 1729753 - | WecB/TagA/CpsF family glycosyl transferase TERM 1999 1732085 - 1732111 + r 72 -10.2 -2.52464 | overlap 1732070 1732069 TCGTGCTAGAGGCCA TTTGCATCTTGC AAG GCAGGCTGCAAA TGGCTTGGAGGAAGG Spea_1425 1733250 - 1732177 - | glycosyl transferase family protein TERM 2000 1732255 - 1732245 - G 74 -6.8 -4.2558 | TACGCCCGAGTAAAA GCTG TGC CAGC TCCTCAAAAACCTTA Spea_1426 1734607 - 1733240 - | polysaccharide biosynthesis protein Spea_1427 1736448 - 1735201 - | hypothetical protein TERM 2001 1735739 - 1735723 - GR 95 -6.5 -5.59879 | overlap 1735724 GATAAACATAAAAAA GCCTGCT AGC AGCAGGT AGCACACTAAGGCCA TERM 2002 1735738 - 1735724 - GR 84 -10 -3.93487 | overlap 1735723 ATAAACATAAAAAAG CCTGCT AGC AGCAGG TAGCACACTAAGGCC TERM 2003 1735963 - 1735951 - GR 72 -4.7 -4.60041 | overlap 1735952 ACTGACGCTGAAAAA CTCGG GGC CCGGG CCGCCAATGATACTC Spea_1428 1737812 - 1736406 - | hypothetical protein TERM 2004 1736993 - 1737021 + gr 80 -6.8 -4.59773 | TTACATTGGTATAGC TGATCAGCAGTT GCTGG AATAGCTGATCA TTTTTGAGCGTCAAC Spea_1429 1739147 - 1737840 - | polysaccharide export protein TERM 2005 1739087 - 1739077 - G 74 -6.8 -4.22338 | opp_overlap 1739077, overlap 1739070 ATCACAAGGGCAAAA GCCT TGT AGGC TTTACCTGCTTGGCA Spea_1430 1739524 - 1739159 - | anti-sigma-factor antagonist TERM 2006 1740161 - 1740179 + r 71 -7.4 -3.9281 | CTTGCGAACGTCCTA GGTCCTAG GTC CTAGTACC TTCTTTAAACCTAGT Spea_1431 1740592 - 1740203 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Spea_1432 1741831 - 1740608 - | response regulator receiver modulated serine phosphatase TERM 2007 1740841 - 1740827 - G 71 -10 -3.28219 | opp_overlap 1740827, overlap 1740825 AATGCCATCAGAATA GAGCAG TAG CTGCTC TTCTTTCTCTAAGGT TERM 2008 1740827 - 1740841 + g 83 -10 -4.15029 | opp_overlap 1740827 1740825 AATGCCATCAGAATA GAGCAG TAG CTGCTC TTCTTTCTCTAAGGT TERM 2009 1742437 - 1742451 + G 72 -8.6 -3.72576 | CTGACAGAGCTTGAT GGCAAA TCG TTTGCC TTTCCTGCCCCGGCG Spea_1433 1742026 - 1742889 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 2010 1744520 - 1744508 - g 77 -10.5 -3.37487 | opp_overlap 1744507, overlap 1744506 TGATACTGCCAAAGA GGCCG GTA CGGCC CTGTTGAGTACAATT TERM 2011 1745469 - 1745487 + G 81 -13.2 -2.65271 | overlap 1745459 1745471 GAGTCATCGGCTCAT CAGGCTCA GGG TGAGCCTG TAGTGTCAACTTGTG Spea_1434 1742889 - 1746449 + | multi-sensor hybrid histidine kinase Spea_1435 1746558 - 1748054 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 2012 1748151 - 1748121 - f 71 -9.9 -2.85078 | opp_overlap 1748126 1748150, overlap 1748126 TAGAGCTCAGCAAAT GAAAAGAGTAGAC TGAGG GTCTACTCTTTTT TGTTTCAAACTTTTT TERM 2013 1748126 - 1748146 + F 100 -10.5 -5.63517 | opp_overlap 1748126 1748121 CTCAGCAAATGAAAA GAGTAGACT GAG GGTCTACTC TTTTTTGTTTCAAAC TERM 2014 1748146 - 1748126 - f 91 -9.8 -4.58773 | opp_overlap 1748126, overlap 1748121 CTCAGCAAATGAAAA GAGTAGAC TGAGG GTCTACTC TTTTTTGTTTCAAAC Spea_1436 1748151 - 1748933 + | putative hydrolase Spea_1437 1748985 - 1750076 + | dTDP-4-dehydrorhamnose reductase Spea_1438 1751853 - 1750387 - | hypothetical protein Spea_1439 1752143 - 1754695 + | glycoside hydrolase family 3 protein Spea_1440 1754834 - 1755622 + | 3'(2'),5'-bisphosphate nucleotidase Spea_1441 1755727 - 1756632 + | fructokinase TERM 2015 1757227 - 1757253 + G 72 -9.4 -3.65224 | TGTTTGATGCTGCCG TGGAGTTAGGCG TAT CGCCTAAGGCCA TTATTAAGCTCCCAT Spea_1442 1756797 - 1757567 + | hypothetical protein Spea_1443 1757890 - 1758564 + | hypothetical protein Spea_1444 1759110 - 1758685 - | hypothetical protein Spea_1445 1759691 - 1759212 - | ferredoxin-type protein NapF TERM 2016 1759771 - 1759757 - R 83 -7.2 -4.7219 | opp_overlap 1759757 1759756 GAGATCAAGATAAAA GCAAAA CAG TTTTGC CTTTGATTCTTACTT TERM 2017 1759843 - 1759864 + r 76 -7.3 -4.19953 | CCTAGGATCTGCTTT TCCTAGGAC CTAG GTCCTAAGA TTTTAGACTTCGCTC Spea_1446 1760886 - 1759867 - | UDP-glucose 4-epimerase Spea_1447 1761878 - 1760970 - | UTP-glucose-1-phosphate uridylyltransferase TERM 2018 1761499 - 1761514 + g 74 -5.4 -4.59773 | opp_overlap 1761496, overlap 1761496 AGTACGGCAAAGGGG GCGTCA CCTA TGATGC TTTTTGCGCATAAAA Spea_1448 1762393 - 1763184 + | phenylalanine 4-monooxygenase Spea_1449 1763267 - 1763605 + | pterin-4-alpha-carbinolamine dehydratase TERM 2019 1763678 - 1763700 + F 95 -8.4 -5.3689 | opp_overlap 1763664, overlap 1763664 CCTCCAGCATTGCAG GCGTGTTAGT ACA GCTGGCACGC TTTTATTTTCTTTAT Spea_1450 1763886 - 1765427 + | transcriptional regulator, TyrR Spea_1451 1765708 - 1766694 + | fumarylacetoacetate (FAA) hydrolase TERM 2020 1766724 - 1766745 + F 100 -9.5 -5.28176 | opp_overlap 1766724 TTCTATTGCATAGAA GGCTAATTC TTAG GAGTTAGCC TTTTTTCTAAATACG Spea_1452 1766811 - 1767461 + | maleylacetoacetate isomerase TERM 2021 1767461 - 1767443 - T 81 -7.4 -4.50976 | TGCGATACCAGAAAA CCAACTGG ATG CCAGCTAG CAGTGTCGCATAGAA Spea_1453 1768434 - 1767553 - | LysR family transcriptional regulator TERM 2022 1767583 - 1767609 + g 79 -8.7 -4.20367 | opp_overlap 1767583 CAGAAACTCAACGAA CGCCTTGTCGG CTTGA CTGATAGGGCG TTGTTTCTTCCAAGC TERM 2023 1767878 - 1767868 - G 80 -6.8 -4.58395 | TTCATGCTGGAAAAA CGCT TGA AGCG TCACCGTATCTAATT TERM 2024 1768177 - 1768201 + g 70 -2.2 -4.93365 | gap 1 GTTTGCCATCGATTT TATGTGCGC TTCAGCTT GCGC-CATA TTTTTGATTATCAGC TERM 2025 1768362 - 1768374 + g 83 -10.5 -3.73775 | GCTGCGCCATATTGA GCCGC TCG GCGGC TTTAGTGAAGCTACC TERM 2026 1768701 - 1768721 + G 77 -3.3 -5.14645 | overlap 1768704 GCTTAATCATTGGCT TATCTATTG CCT CAATGGTTA TTTTTATTAACTTGT TERM 2027 1768704 - 1768718 + G 72 -5 -4.64495 | overlap 1768701 TAATCATTGGCTTAT CTATTG CCT CAATGG TTATTTTTATTAACT TERM 2028 1769573 - 1769589 + G 79 -2.9 -5.37593 | overlap 1769574 TTATTCGATACTTTA GCGGCAA TCT TTGCTGG TTTTTTACTTTCAGC Spea_1454 1768643 - 1769872 + | major facilitator transporter Spea_1455 1770276 - 1769998 - | hypothetical protein Spea_1456 1772396 - 1773805 + | glutamyl-tRNA synthetase TERM 2029 1775565 - 1775537 - T 95 -14.7 -2.83255 | opp_overlap 1775535 1775534, overlap 1775558 ATAATACCTAGGACA CCGCGCTATTCTT GTT AAGAACAGCACGG CGGTTTCACTTTAAT TERM 2030 1776583 - 1776596 + T 100 -8.1 -5.65177 | opp_overlap 1776583 TAGTAAGTAATTAAA CCACC TTTG GGTGG TTTTTTTATGCCTGT TERM 2031 1776596 - 1776583 - T 75 -8.1 -4.01419 | opp_overlap 1776583 TAGTAAGTAATTAAA CCACC TTTG GGTGG TTTTTTTATGCCTGT TERM 2032 1777468 - 1777453 - T 85 -7.6 -4.91712 | opp_overlap 1777452 1777453 GCTAACGTATAAAAA CCATCA TCAC TGATGG CTTTTGTACTGAACA TERM 2033 1777563 - 1777547 - T 100 -12.3 -4.29508 | ATCGACACCAAGAAA CCCACCA GTT TGGTGGG CCCAAAGCTGTGCGT Spea_1457 1779358 - 1777529 - | ABC transporter related TERM 2034 1780187 - 1780222 + G 71 -3.4 -4.7373 | gap 1, overlap 1780188 CCAGAATAAAGGGTT AGTGGCGTTGAAACT ACAGATG AGTTTCAG-GCCACC TTTTTCATGGGCTAA TERM 2035 1780997 - 1781017 + G 71 -7.5 -3.94333 | opp_overlap 1780997 1780999 AAAGCTCGCTCAAAT TAGTACCCC TTG GGGGAGCTA TTTAACTTTTCAGTT Spea_1458 1779534 - 1781048 + | AraC family transcriptional regulator Spea_1459 1781045 - 1781608 + | methylated-DNA--protein-cysteine methyltransferase TERM 2036 1781714 - 1781724 + F 71 -4 -4.86621 | opp_overlap 1781714 1781718, overlap 1781718 GATATTAGCGTAGAA TAAG CGC CTTA TTTTTGATTAGGCGT TERM 2037 1782668 - 1782656 - g 77 -9.1 -3.95073 | TTTCATAGTGATAAA GGGCA GGG TGCCC GTAACCGTGTACTTG Spea_1460 1781753 - 1783081 + | DEAD/DEAH box helicase domain-containing protein TERM 2038 1783146 - 1783128 - f 79 -8.9 -3.93782 | opp_overlap 1783128 CGACTGAACATGAAA TGGACTC TATAC GAGTCCA TTTTTTTAGCAAATA TERM 2039 1783128 - 1783146 + F 95 -8.9 -5.41143 | opp_overlap 1783128 CGACTGAACATGAAA TGGACTC TATAC GAGTCCA TTTTTTTAGCAAATA TERM 2040 1783376 - 1783364 - g 76 -7.7 -4.20783 | AGTGGACCCAATAAA GATCC TTG GGATC TGCTCGAGTTAAAGG TERM 2041 1783514 - 1783502 - g 73 -10.5 -3.06696 | opp_overlap 1783506 TTCTCTCGCAATATA CCGCC TAA GGCGG AAGACTTAGATTATT Spea_1461 1783304 - 1783774 + | dual specificity protein phosphatase Spea_1462 1783801 - 1785345 + | phospholipase D/transphosphatidylase Spea_1463 1785414 - 1786340 + | response regulator receiver modulated CheW protein Spea_1464 1786520 - 1787743 + | serine/threonine transporter SstT TERM 2042 1787797 - 1787765 - T 100 -19.3 -2.84581 | opp_overlap 1787770, overlap 1787770 GAAGCGATTAATAAC GAAAAGCCCGCTCAC TAT GTGAGCGGGCTTTTT TTTTGTTTGCGAGTC TERM 2043 1787770 - 1787792 + T 100 -19.2 -6.4753 | opp_overlap 1787765 1787770 GATTAATAACGAAAA GCCCGCTCAC TAT GTGAGCGGGC TTTTTTTTTGTTTGC TERM 2044 1787792 - 1787770 - T 100 -19.2 -4.5774 | opp_overlap 1787770, overlap 1787765 GATTAATAACGAAAA GCCCGCTCAC TAT GTGAGCGGGC TTTTTTTTTGTTTGC Spea_1465 1789234 - 1787864 - | oxidoreductase domain-containing protein TERM 2045 1788275 - 1788310 + g 74 -6.9 -4.32233 | overlap 1788289 ACTATAGGGGCGTGG GGTCGTAGTATCGTG CTGAAC CATGATGGTACGGCC TTTTACCGTTTTTAT TERM 2046 1789118 - 1789130 + g 72 -4.7 -4.56775 | opp_overlap 1789104 ACCCATTACTGACGG GCCAG CAG CGGGC TTTTTGGGAACAGCT Spea_1466 1789519 - 1789929 + | hypothetical protein TERM 2047 1790021 - 1789994 - T 76 -10.6 -2.73771 | opp_overlap 1790001, overlap 1789996 1790001 TTAGATTGTTTAAAG CATAAAAGGGGC ATAA GCCCCTTTTTCG TGATTAAATTTAGCT TERM 2048 1790019 - 1789996 - T 71 -9.6 -2.91322 | opp_overlap 1790001, overlap 1789994 1790001 AGATTGTTTAAAGCA TAAAAGGGGC ATAA GCCCCTTTTT CGTGATTAAATTTAG TERM 2049 1790001 - 1790014 + T 93 -9.5 -4.81083 | opp_overlap 1789996 1789994 1790001 GTTTAAAGCATAAAA GGGGC ATAA GCCCC TTTTTCGTGATTAAA TERM 2050 1790014 - 1790001 - T 91 -9.5 -4.61566 | opp_overlap 1790001, overlap 1789996 1789994 GTTTAAAGCATAAAA GGGGC ATAA GCCCC TTTTTCGTGATTAAA Spea_1467 1790752 - 1790099 - | pseudouridine synthase Spea_1468 1791482 - 1790889 - | hypothetical protein Spea_1469 1791929 - 1792966 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TERM 2051 1792987 - 1793013 + F 100 -11 -5.60993 | opp_overlap 1792987 CAAATTGCTTTAAAA TACCCAGTTCAT AAT ATGAAGTGGGTA TTTTTTTATCCGCGG TERM 2052 1793013 - 1792987 - f 88 -11 -4.10453 | opp_overlap 1792987 CAAATTGCTTTAAAA TACCCAGTTCAT AAT ATGAAGTGGGTA TTTTTTTATCCGCGG Spea_1470 1793152 - 1794285 + | queuine tRNA-ribosyltransferase Spea_1471 1794316 - 1794648 + | preprotein translocase subunit YajC TERM 2053 1794724 - 1794695 - g 80 -7.3 -4.59773 | gap 1, opp_overlap 1794695 CCCGATGTGGAAAAA CCTAATGGTGATAA TCA TTATCTCCAT-AGG TGCATTCTATGCGAT TERM 2054 1795766 - 1795751 - g 77 -9 -3.86252 | opp_overlap 1795765 CGTGACTAAAGACAA CATCGG TAAG CCGATG GCAACGCTATTTATC Spea_1472 1794684 - 1796516 + | preprotein translocase subunit SecD Spea_1473 1796529 - 1797476 + | preprotein translocase subunit SecF TERM 2055 1797489 - 1797518 + F 83 -12.3 -2.53015 | opp_overlap 1797496, overlap 1797496 TAATCTGTACTTAGT TAATAAAGCCACC GAAA GGTGGCTTTTTTA TGGGTTCACCAATAT TERM 2056 1797496 - 1797511 + F 100 -10.4 -5.31456 | opp_overlap 1797496, overlap 1797489 TACTTAGTTAATAAA GCCACC GAAA GGTGGC TTTTTTATGGGTTCA TERM 2057 1797511 - 1797496 - f 89 -10.4 -4.2123 | opp_overlap 1797496 1797489 TACTTAGTTAATAAA GCCACC GAAA GGTGGC TTTTTTATGGGTTCA TERM 2058 1797672 - 1797660 - f 80 -6.3 -4.68593 | TGTAGCATGTAAAAA CACTT TTG AAGTG AGCTAAAATTGAGCT Spea_1474 1797742 - 1798059 + | hypothetical protein Spea_1475 1798059 - 1798418 + | rhodanese domain-containing protein TERM 2059 1798884 - 1798901 + G 71 -7.7 -3.96148 | gap 1, opp_overlap 1798859 1798886, overlap 1798888 AGATTGCGATCAGTA CAGCGGGC GCG GCCC-CTG TTTATGCTCGCGAAC Spea_1476 1798502 - 1799413 + | siroheme synthase Spea_1477 1799940 - 1800485 + | YaeQ family protein TERM 2060 1800552 - 1800535 - T 100 -11.3 -5.52909 | opp_overlap 1800535 TAACACGTAAAAAAA GCCAGTC ATTA GACTGGC TTTTTTGTTTGTGTA TERM 2061 1800535 - 1800552 + T 100 -11.3 -5.76237 | opp_overlap 1800535 TAACACGTAAAAAAA GCCAGTC ATTA GACTGGC TTTTTTGTTTGTGTA Spea_1478 1802019 - 1800580 - | carbon starvation protein CstA TERM 2062 1802138 - 1802107 - R 77 -10.2 -3.36569 | opp_overlap 1802100 1802099, overlap 1802105 CTAAGCGGTCAAATA GCTAAGGTCAGC GGTTATAT GCTGTCCTTAGC GGTTGAACTTTTTAG Spea_1479 1802897 - 1802187 - | putative two-component response-regulatory protein YehT Spea_1480 1804574 - 1802901 - | signal transduction histidine kinase, LytS Spea_1481 1804760 - 1805002 + | hypothetical protein TERM 2063 1805037 - 1805060 + T 100 -14 -5.38321 | opp_overlap 1805037 1805041 TGAATACAGTAAAAA TAAAGCCTGC ATCT GCAGGCTTTA TTTTTTATCATATTT TERM 2064 1805060 - 1805037 - T 100 -14 -4.87807 | opp_overlap 1805037, overlap 1805041 TGAATACAGTAAAAA TAAAGCCTGC ATCT GCAGGCTTTA TTTTTTATCATATTT TERM 2065 1805056 - 1805041 - T 93 -10.4 -4.94262 | opp_overlap 1805037, overlap 1805037 TACAGTAAAAATAAA GCCTGC ATCT GCAGGC TTTATTTTTTATCAT Spea_1482 1805370 - 1805074 - | type IV pilus assembly PilZ TERM 2066 1805554 - 1805583 + r 77 -10.7 -2.85216 | opp_overlap 1805557, overlap 1805551 AGCAGCAGGTAGTAA AAACGCCCGAAGT GAAC ACTTCGGGCGTAG TCGTTATAGATCGTC TERM 2067 1805580 - 1805557 - R 100 -16.8 -4.75372 | opp_overlap 1805554 1805551 AGCAGGTAGTAAAAA CGCCCGAAGT GAAC ACTTCGGGCG TAGTCGTTATAGATC Spea_1483 1805994 - 1805587 - | phosphate-starvation-inducible E TERM 2068 1806540 - 1806557 + r 73 -6.9 -4.28375 | opp_overlap 1806541, overlap 1806541 AACAGGCATAAAAAA ACCGCCT ATAA AGGCGGC TTTTGAATGTCTTAA TERM 2069 1806556 - 1806541 - R 100 -10.4 -5.65177 | opp_overlap 1806540 1806541 ACAGGCATAAAAAAA CCGCCT ATAA AGGCGG CTTTTGAATGTCTTA TERM 2070 1806541 - 1806556 + r 75 -10.4 -3.16302 | opp_overlap 1806541, overlap 1806540 ACAGGCATAAAAAAA CCGCCT ATAA AGGCGG CTTTTGAATGTCTTA Spea_1484 1807378 - 1806578 - | inositol-phosphate phosphatase Spea_1485 1807534 - 1808298 + | RNA methyltransferase TERM 2071 1809104 - 1809093 - g 72 -5.8 -4.431 | overlap 1809095 TAGTGATGCAGAAAA TGCG GCAG CGCA GAAACGTCAGAAGTC Spea_1486 1808326 - 1809147 + | serine O-acetyltransferase TERM 2072 1809237 - 1809197 - f 100 -17.1 -4.15222 | opp_overlap 1809190 1809199, overlap 1809219 ATCTTGCCTAATAAA CAGGTTAAATACCCCAGCA AAA TGACAGGGTATTTAACCTG TCATGATCCTTTTAA TERM 2073 1809199 - 1809235 + F 71 -9.5 -2.85803 | opp_overlap 1809197 1809219, overlap 1809190 CTTGCCTAATAAACA GGTTAAATACCCCAGCA AAA TGACAGGGTATTTAACC TGTCATGATCCTTTT TERM 2074 1809240 - 1809219 - f 76 -7.3 -4.28018 | opp_overlap 1809199 1809190, overlap 1809197 AATACCCCAGCAAAA TGACAGGGT ATTT AACCTGTCA TGATCCTTTTAATAC TERM 2075 1809426 - 1809406 - g 70 -9.8 -3.07816 | opp_overlap 1809402, overlap 1809410 TTGCCATGCATTCAA CCAATGGT CCTGT ACCATTGG CCGATATTTCCGAGC TERM 2076 1809513 - 1809497 - g 79 -3 -5.35222 | gap 1, opp_overlap 1809505, overlap 1809498 1809499 AAAACTCAGAAAAAA CGGCTTG GTCT CAAGC-G TACGTGGCCCAGGTG Spea_1487 1809342 - 1809803 + | BadM/Rrf2 family transcriptional regulator Spea_1488 1809887 - 1811101 + | cysteine desulfurase IscS Spea_1489 1811142 - 1811525 + | scaffold protein Spea_1490 1811540 - 1811863 + | iron-sulfur cluster assembly protein IscA TERM 2077 1811931 - 1811972 + G 77 -11 -3.21218 | gap 2 CCTATGATGTCGACA CCGCCTTACTTGCAGATCGC TACC GCGAACTGCAA--AGGGCGG TTCATCCTGACAAAT Spea_1491 1811882 - 1812406 + | co-chaperone HscB TERM 2078 1812456 - 1812429 - f 81 -11.4 -3.06261 | opp_overlap 1812411 1812430, overlap 1812406 TCTTAATTTTTAATA CTGTTGGCTCAA GACA TTGAGCCAACAT TTTTTTAAGTTGGAT TERM 2079 1812430 - 1812455 + F 100 -14.9 -5.53288 | opp_overlap 1812406 1812429, overlap 1812411 CTTAATTTTTAATAC TGTTGGCTCAA GACA TTGAGCCAACA TTTTTTTAAGTTGGA Spea_1492 1812476 - 1814338 + | chaperone protein HscA Spea_1493 1814347 - 1814682 + | ferredoxin, 2Fe-2S type, ISC system TERM 2080 1814739 - 1814718 - f 86 -10.2 -4.07568 | opp_overlap 1814718 CGTTTTGTTGTAAAA GCCAGTAG CTAAGT CTACTGGC TTTTTTGTTTGCGAT TERM 2081 1814718 - 1814739 + F 100 -10.2 -5.64421 | opp_overlap 1814718 CGTTTTGTTGTAAAA GCCAGTAG CTAAGT CTACTGGC TTTTTTGTTTGCGAT TERM 2082 1814760 - 1814788 + F 86 -9.8 -3.97947 | gap 1, opp_overlap 1814769 TGTTTGCGATGTCTT GTCCTGAAATGTG TTTA CACATTT-AGGAC TTTATAATGACTACA Spea_1494 1814795 - 1815193 + | transposase TERM 2083 1815533 - 1815546 + G 72 -6.7 -4.28111 | opp_overlap 1815532 AGTTAGTGCCAACAG CACCT GAAG AGGTG TTTGTTAGTGATATA TERM 2084 1815920 - 1815931 + G 72 -3 -4.9792 | AGTTAAAGCAACTCG TTGA GGAG TCAA TTTTTATATACAATG TERM 2085 1816026 - 1816003 - g 100 -13.2 -5.27923 | opp_overlap 1816005 CAAGTGCATAAAAAA GACCAGCAGC AGAA GCTACTGGTC TAGTAAAAACCGTCA Spea_1495 1815277 - 1816029 + | integrase catalytic region Spea_1496 1816742 - 1816939 + | hypothetical protein Spea_1497 1817121 - 1817285 + | hypothetical protein Spea_1498 1817514 - 1817945 + | nucleoside-diphosphate kinase TERM 2086 1817953 - 1817988 + F 100 -15.6 -3.80625 | opp_overlap 1817963, overlap 1817963 CTCGTTAATTCGAAC GCGTAAAAAAGGAGCC GAAT GGCTCCTTTTTTTTGC TTTAAATTCTGCAAA TERM 2087 1817978 - 1817963 - f 93 -10.4 -5.055 | opp_overlap 1817963 1817953 CGAACGCGTAAAAAA GGAGCC GAAT GGCTCC TTTTTTTTGCTTTAA TERM 2088 1817963 - 1817978 + F 100 -10.4 -6.02546 | opp_overlap 1817963, overlap 1817953 CGAACGCGTAAAAAA GGAGCC GAAT GGCTCC TTTTTTTTGCTTTAA TERM 2089 1820191 - 1820174 - g 72 -5.6 -4.431 | GATGGACGCAGAAAA CCAGTA TAACCC TACTGG TGAAGATATGACTAT Spea_1499 1819107 - 1821791 + | TonB-dependent receptor TERM 2090 1821851 - 1821835 - T 100 -9.4 -5.24989 | opp_overlap 1821835 CTAGATAGTAAAAAA CCTCCG TCATG CGGAGG TTTTTTTATGGCTAA TERM 2091 1821835 - 1821851 + T 100 -10.1 -5.64274 | opp_overlap 1821835 CTAGATAGTAAAAAA CCTCCGT CAT GCGGAGG TTTTTTTATGGCTAA Spea_1500 1822271 - 1821915 - | TraR/DksA family transcriptional regulator Spea_1501 1823349 - 1822390 - | dihydrouridine synthase DuS TERM 2092 1823678 - 1823659 - H 70 -9.4 -2.52933 | opp_overlap 1823663 1823675, overlap 1823658 GTCTAATTTAGCAAG CCAACAAA ATGC TTTGTTGG TAACCGATACTGTAT Spea_1502 1823718 - 1824200 + | hypothetical protein TERM 2093 1824218 - 1824243 + F 100 -14.7 -3.98745 | TGTCTTGGTAGTTAT GCGGGGTCAGC ATGT GCTGGCCCTGC TTGTTTAACTGATTG Spea_1503 1824280 - 1825131 + | hypothetical protein Spea_1504 1825131 - 1825877 + | hypothetical protein Spea_1505 1825971 - 1826090 + | hypothetical protein TERM 2094 1826121 - 1826140 + F 100 -9.3 -5.75538 | opp_overlap 1826121 AGCTCGGGTATACTA GCCACTC AATACA GAGTGGC TTTTTGTTTTTTAGG Spea_1506 1826164 - 1826532 + | hypothetical protein TERM 2095 1827226 - 1827247 + G 80 -5.7 -5.03961 | opp_overlap 1827225 TTATCCGTAAATTAG GCGGAAGCG TAAA CGATGCCGC TTTTGTTATTTCATT Spea_1507 1826790 - 1827341 + | adenine phosphoribosyltransferase TERM 2096 1827453 - 1827477 + F 70 -8 -3.63073 | opp_overlap 1827455 CTAAGACGCTTGAGA TAGCATGTAA AACCG TTGCATGCTA TTGTTCAACGATGTC Spea_1508 1827540 - 1830386 + | DNA polymerase III, subunits gamma and tau Spea_1509 1830487 - 1830816 + | hypothetical protein TERM 2097 1830908 - 1830928 + T 100 -14.1 -5.52023 | opp_overlap 1830908 CTAAAAACAAAAAAA GCTCAAGCA ATT TGCTTGAGC TTTTTTGTTAGTCGT TERM 2098 1830928 - 1830908 - T 100 -14.1 -6.20267 | opp_overlap 1830908 CTAAAAACAAAAAAA GCTCAAGCA ATT TGCTTGAGC TTTTTTGTTAGTCGT Spea_1510 1831602 - 1831042 - | acetyltransferase TERM 2099 1831309 - 1831325 + g 76 -4.3 -4.93318 | opp_overlap 1831299 1831295, overlap 1831311 AGTCATATCGCCAAT TTTGGCG TTA CGCCCGA TTTTTATAGATTGTG Spea_1511 1832071 - 1832754 + | Sel1 domain-containing protein Spea_1512 1832757 - 1833677 + | hypothetical protein TERM 2100 1834864 - 1834878 + G 81 -8.6 -4.51174 | CGAAGGCGGTGGAGG TCGACA GAA TGTCGA TTTTACTTATGGTCA TERM 2101 1835767 - 1835787 + G 71 -3.9 -4.91109 | opp_overlap 1835758, overlap 1835769 AACAGACAGCTTAGC CGGACAAGC AGG GATTGTCGG TTTTTCTGATGAAGC Spea_1513 1834262 - 1837156 + | TonB-dependent receptor TERM 2102 1837217 - 1837246 + F 100 -13.9 -4.41895 | opp_overlap 1837222, overlap 1837222 GTCGGTGTAATGTCC TAAAACCTAATCA ATGT TGATTAGGTTTTA TTTTACTTAAAAGTT TERM 2103 1837222 - 1837241 + F 100 -9.4 -5.18643 | opp_overlap 1837222, overlap 1837217 TGTAATGTCCTAAAA CCTAATCA ATGT TGATTAGG TTTTATTTTACTTAA TERM 2104 1837241 - 1837222 - f 86 -9.4 -4.11484 | opp_overlap 1837217 1837222 TGTAATGTCCTAAAA CCTAATCA ATGT TGATTAGG TTTTATTTTACTTAA Spea_1514 1837304 - 1838458 + | kelch repeat-containing protein TERM 2105 1838599 - 1838623 + F 75 -9.4 -3.30635 | opp_overlap 1838589, overlap 1838587 ACAATGGTTTACCTA GTTGCACCTT ATTTG AAGGTGTAAC TTGTAAGCCGCTTTC Spea_1515 1838982 - 1841831 + | exo-alpha-sialidase TERM 2106 1841917 - 1841868 - T 89 -11.7 -3.73775 | opp_overlap 1841874 1841875 1841914, overlap 1841870 1841874 TCCATGGCTATGAAA TAGAAACTTAGACTGTTAGCTAT AAGT ATGGCTAACAGTCTAGATTTCGA GCCGTTAAGCTAAGG TERM 2107 1841915 - 1841870 - T 100 -14.3 -3.45324 | opp_overlap 1841874 1841875 1841914, overlap 1841868 1841874 CATGGCTATGAAATA GAAACTTAGACTGTTAGCTAT AAGT ATGGCTAACAGTCTAGATTTC GAGCCGTTAAGCTAA TERM 2108 1841910 - 1841874 - T 90 -10.4 -4.36903 | gap 1, opp_overlap 1841874 1841875, overlap 1841870 1841868 GCTATGAAATAGAAA CTTAGACTGTTAGCTAT AAGT ATGGCTAACAGTCTA-G ATTTCGAGCCGTTAA TERM 2109 1841874 - 1841911 + T 88 -11.5 -3.55622 | opp_overlap 1841874 1841870 1841868, overlap 1841875 GCTATGAAATAGAAA CTTAGACTGTTAGCTAT AAGT ATGGCTAACAGTCTAGA TTTCGAGCCGTTAAG TERM 2110 1841875 - 1841910 + T 95 -15 -2.73159 | opp_overlap 1841874 1841870 1841868, overlap 1841874 CTATGAAATAGAAAC TTAGACTGTTAGCTAT AAGT ATGGCTAACAGTCTAG ATTTCGAGCCGTTAA Spea_1516 1842734 - 1841922 - | putative hydrolase Spea_1517 1842935 - 1843639 + | transcriptional regulator NanR TERM 2111 1843731 - 1843750 + F 100 -12.2 -5.4505 | AATTATTCATTCTAA GGGCTATC TTAC GATAGCCC TTTTTTATTGCGCGC TERM 2112 1843760 - 1843776 + F 75 -7.9 -4.11216 | TAGCCCTTTTTTATT GCGCGCA GTT TGAGCGC TTTTGAAAATCGAAG TERM 2113 1846356 - 1846342 - g 82 -5.7 -5.1675 | GCATTGACTAAAAAA GCCAA TTCAT TTGGC GCGATAGTCGGAATT Spea_1518 1843894 - 1846572 + | SSS family solute/sodium (Na+) symporter Spea_1519 1846596 - 1847351 + | N-acetylmannosamine-6-phosphate 2-epimerase Spea_1520 1847348 - 1848220 + | ROK family protein TERM 2114 1848672 - 1848652 - g 76 -7.5 -4.35116 | overlap 1848653 TAGCTCAGAGCAAAA TCCTCGCCT CCA AGGCGAAGC GTATGAGCAAAAGAT TERM 2115 1848671 - 1848653 - g 77 -11 -3.20588 | overlap 1848652 AGCTCAGAGCAAAAT CCTCGCCT CCA AGGCGAAG CGTATGAGCAAAAGA TERM 2116 1849111 - 1849097 - g 88 -8.6 -4.81734 | overlap 1849101 AAAGAGCAGCAAAAA GTGACT GAT AGTCAC GGACTATTAACAATG Spea_1521 1848293 - 1849132 + | glucosamine-6-phosphate isomerase TERM 2117 1849190 - 1849171 - T 83 -9.4 -3.85698 | opp_overlap 1849171 GTGCTTCTTTATAAA GCCATATT GTTT AATATGGC TTTTTTATTGCCACA TERM 2118 1849171 - 1849190 + T 100 -9.4 -5.4505 | opp_overlap 1849171 GTGCTTCTTTATAAA GCCATATT GTTT AATATGGC TTTTTTATTGCCACA TERM 2119 1849301 - 1849321 + T 93 -12.7 -3.89956 | opp_overlap 1849301 ATAGATAAAGAAAAA CCATCATCA AGA TGATGATGG TTTGATATATAGTGC TERM 2120 1849321 - 1849301 - T 100 -12.7 -5.4433 | opp_overlap 1849301 ATAGATAAAGAAAAA CCATCATCA AGA TGATGATGG TTTGATATATAGTGC Spea_1522 1850450 - 1849545 - | dihydrodipicolinate synthetase Spea_1523 1851605 - 1850469 - | N-acetylglucosamine-6-phosphate deacetylase TERM 2121 1851254 - 1851266 + g 77 -3.3 -5.15634 | opp_overlap 1851254 AGTGAACACCTATAA CGCCT GGA AGCCG TTTTTTAATGGCGTC Spea_1524 1852024 - 1853007 + | hypothetical protein Spea_1525 1853244 - 1853843 + | recombination protein RecR TERM 2122 1853956 - 1853929 - f 100 -13.6 -4.15453 | opp_overlap 1853929 CAACTTATTTTAAAA TCCAGTTTACGA ATAT TCGCAAACTGGA TTTTTTTTGTGCAAT TERM 2123 1853929 - 1853956 + F 100 -11.4 -5.94713 | opp_overlap 1853929 CAACTTATTTTAAAA TCCAGTTTACGA ATAT TCGCAAACTGGA TTTTTTTTGTGCAAT Spea_1526 1854069 - 1855985 + | heat shock protein 90 TERM 2124 1856035 - 1856004 - f 71 -7.3 -3.82433 | opp_overlap 1856004 ACAACTATGATTAAA GGGGCAGTTATAC TGATTG GTATTACTGCCTC TTTCTTTATGGTCAC TERM 2125 1856004 - 1856035 + F 91 -10.2 -4.59342 | opp_overlap 1856004 ACAACTATGATTAAA GGGGCAGTTATACT GATT GGTATTACTGCCTC TTTCTTTATGGTCAC Spea_1527 1856074 - 1856919 + | thioredoxin domain-containing protein Spea_1528 1857059 - 1857742 + | nucleoside-triphosphate--adenylate kinase TERM 2126 1857836 - 1857851 + F 100 -9 -5.77632 | opp_overlap 1857836 CTCATATTTTAAAAA GCCCAT GTAA ATGGGC TTTTTTTATGCTTTT TERM 2127 1857851 - 1857836 - f 88 -9 -4.64766 | opp_overlap 1857836 CTCATATTTTAAAAA GCCCAT GTAA ATGGGC TTTTTTTATGCTTTT Spea_1529 1857913 - 1858908 + | ferrochelatase TERM 2128 1858947 - 1858972 + F 85 -6.8 -5.07567 | opp_overlap 1858947 1858945 TCAGCTAGCGAAAGA GGTGGGGTGT GGTAAA ATCCCCCACC TTTTTTGGCATCTAG Spea_1530 1859148 - 1860476 + | inosine kinase TERM 2129 1860542 - 1860516 - f 89 -9.5 -4.29327 | opp_overlap 1860516 TATAAGCAATATAAA GGCATAACTTG GTGAT CAGGTTATGCC TTTTTTGAATCTACT TERM 2130 1860516 - 1860542 + F 100 -12.4 -5.13473 | opp_overlap 1860516 TATAAGCAATATAAA GGCATAACTTGG TGA TCAGGTTATGCC TTTTTTGAATCTACT Spea_1531 1860585 - 1861139 + | hexapaptide repeat-containing transferase TERM 2131 1861171 - 1861155 - T 70 -8.7 -3.3452 | TAGATGATGCGATAA GCTAGCA GTT TGCCAGC GTAAAATGGCTGCCT TERM 2132 1861238 - 1861207 - T 95 -14.6 -2.63688 | opp_overlap 1861214, overlap 1861214 AGCGAAAGTAAGTCA TTAAAAAGGCGTCC AATT GGACGCCTTTTTAG ATTGAACCTAGCTTT TERM 2133 1861214 - 1861231 + T 100 -12.7 -4.74103 | opp_overlap 1861214 1861207 GTAAGTCATTAAAAA GGCGTCC AATT GGACGCC TTTTTAGATTGAACC TERM 2134 1861231 - 1861214 - T 100 -12.7 -4.77157 | opp_overlap 1861214, overlap 1861207 GTAAGTCATTAAAAA GGCGTCC AATT GGACGCC TTTTTAGATTGAACC Spea_1532 1862582 - 1861254 - | sodium:dicarboxylate symporter TERM 2135 1862545 - 1862558 + g 85 -3.8 -5.48054 | CCGATAATTATCTTA CTCG TGAGGC CGAG TTTTTTAGTTTTCGT Spea_1533 1862800 - 1865223 + | Ig domain-containing protein TERM 2136 1865285 - 1865268 - T 100 -12.7 -4.66163 | opp_overlap 1865268 AGCTTCACCTAAAAA GCCCTGC GATA GCAGGGC TTTTTTTCAGCTCAA TERM 2137 1865268 - 1865285 + T 100 -12.7 -5.44119 | opp_overlap 1865268 AGCTTCACCTAAAAA GCCCTGC GATA GCAGGGC TTTTTTTCAGCTCAA TERM 2138 1865394 - 1865431 + T 77 -10.9 -2.91274 | gap 1, opp_overlap 1865406, overlap 1865406 ACCGCTGTATAGCCA CATATGAAAAAACCACCG TAA TGGTGGTTTTTTT-TATG TCTACTTAAGATCAG TERM 2139 1865420 - 1865406 - T 90 -7.1 -5.24989 | opp_overlap 1865406 1865394 CCACATATGAAAAAA CCACC GTAAT GGTGG TTTTTTTTATGTCTA TERM 2140 1865406 - 1865420 + T 100 -7.8 -6.06529 | opp_overlap 1865406, overlap 1865394 CCACATATGAAAAAA CCACCG TAA TGGTGG TTTTTTTTATGTCTA Spea_1534 1866792 - 1865455 - | succinylarginine dihydrolase TERM 2141 1865712 - 1865738 + g 76 -11.7 -2.66899 | opp_overlap 1865682, overlap 1865682 1865711 CACCACCATTTTGCA TGCTCTGCTTC ACATC GAAGTAGAGCA CTTGCTTGATTGGGG Spea_1535 1867129 - 1869819 + | DNA topoisomerase I TERM 2142 1869880 - 1869843 - T 100 -14.3 -3.6504 | opp_overlap 1869844 1869853, overlap 1869844 1869853 AAGTGCAACAAAAAG TCATAAAAAAGCCCCGA TAAT TCGGGGCTTTTTTTTGT GTTCATCTTTAGGCT TERM 2143 1869879 - 1869844 - T 100 -17.8 -2.7794 | opp_overlap 1869844 1869853, overlap 1869843 1869853 AGTGCAACAAAAAGT CATAAAAAAGCCCCGA TAAT TCGGGGCTTTTTTTTG TGTTCATCTTTAGGC TERM 2144 1869844 - 1869879 + T 100 -17.8 -3.29837 | opp_overlap 1869844 1869843 1869853, overlap 1869853 AGTGCAACAAAAAGT CATAAAAAAGCCCCGA TAAT TCGGGGCTTTTTTTTG TGTTCATCTTTAGGC TERM 2145 1869870 - 1869853 - T 100 -12.7 -5.35222 | opp_overlap 1869844 1869853, overlap 1869844 1869843 AAAAGTCATAAAAAA GCCCCGA TAAT TCGGGGC TTTTTTTTGTGTTCA TERM 2146 1869853 - 1869870 + T 100 -12.7 -6.10295 | opp_overlap 1869853 1869844 1869843, overlap 1869844 AAAAGTCATAAAAAA GCCCCGA TAAT TCGGGGC TTTTTTTTGTGTTCA Spea_1536 1870756 - 1869980 - | hypothetical protein TERM 2147 1870191 - 1870227 + g 77 -10.2 -3.36327 | gap 1, overlap 1870186 GTGACCATCTGTTTG GCCGAGCCATACTGCTT CATA AAGCAGGCTG-CTCGGC TTCTCCCTAGCATAG Spea_1537 1870985 - 1871959 + | transcriptional regulator CysB TERM 2148 1871986 - 1872013 + T 95 -11.4 -4.72386 | opp_overlap 1871992, overlap 1871992 GCTGTCACTGATAAT AAAAAACCTCGC AATA GCGAGGTTTTTG TTTTTAAGTGCTTTG TERM 2149 1871992 - 1872007 + T 100 -10.4 -5.63236 | opp_overlap 1871992, overlap 1871986 ACTGATAATAAAAAA CCTCGC AATA GCGAGG TTTTTGTTTTTAAGT TERM 2150 1872007 - 1871992 - T 100 -10.4 -5.56673 | opp_overlap 1871986 1871992 ACTGATAATAAAAAA CCTCGC AATA GCGAGG TTTTTGTTTTTAAGT Spea_1538 1873431 - 1872055 - | L-serine dehydratase 1 TERM 2151 1872728 - 1872742 + g 87 -10 -4.25104 | overlap 1872721 AGTTTTAAGCCTCCA GGAAGG ATG CCTTCC TTTTGGTAACCGCGC Spea_1539 1873763 - 1874830 + | beta-hexosaminidase TERM 2152 1875124 - 1875136 + G 78 -4.8 -5.09225 | TAGGGGGATATTGGG CCGA GCGTA TCGG TTTTTTAAATGGCAT TERM 2153 1875220 - 1875194 - g 76 -9.4 -3.65812 | overlap 1875196 GCTGCCTCAAGATAA TATGGTCGGTCA GAT TGACCGTCCAGA AGAGTACGCAGATAT TERM 2154 1875218 - 1875196 - g 82 -12 -3.41024 | overlap 1875194 TGCCTCAAGATAATA TGGTCGGTCA GAT TGACCGTCCA GAAGAGTACGCAGAT Spea_1540 1874904 - 1875443 + | hypothetical protein TERM 2155 1875467 - 1875494 + F 100 -11.4 -5.79595 | TGAGTCTTGTTAGAG CCACCAATGGTC ATTA GATTATTGGTGG TTTTTTATTTTCAGC TERM 2156 1875977 - 1876001 + G 82 -7.1 -4.78149 | opp_overlap 1875975 1875978, overlap 1875978 TGGTTGTAGAAGAGG ACGAGGCAGAT GAG ATCTACCTCGA TTTTTCAATTATCCA TERM 2157 1876000 - 1875978 - g 79 -12.8 -2.80074 | opp_overlap 1875977 1875978, overlap 1875975 GGTTGTAGAAGAGGA CGAGGCAGAT GAG ATCTACCTCG ATTTTTCAATTATCC TERM 2158 1875978 - 1876000 + G 77 -10.6 -3.46167 | opp_overlap 1875978 1875975, overlap 1875977 GGTTGTAGAAGAGGA CGAGGCAGAT GAG ATCTACCTCG ATTTTTCAATTATCC Spea_1541 1875748 - 1876023 + | acylphosphatase Spea_1542 1877027 - 1876020 - | hypothetical protein TERM 2159 1876358 - 1876378 + g 75 -6.1 -4.40894 | overlap 1876368 AAATATTTACCGTCC CATCGAGCT TCC AGATCGGTG TTTTGGTATCGTTTG TERM 2160 1876987 - 1877004 + g 70 -4.9 -4.4521 | gap 1, opp_overlap 1876987, overlap 1876985 GATAAAAGGCTAACA GCTAAAGC TGC GCTT-AGC TTGTTTTTAGATAGT Spea_1543 1880503 - 1877030 - | transcription-repair coupling factor TERM 2161 1877186 - 1877198 + g 76 -7.7 -4.20868 | opp_overlap 1877186 CAAACCGATGATGAA GGTTG GAT CAACC TTATTGTTTTCACCG TERM 2162 1878980 - 1878957 - G 74 -8.2 -3.84961 | gap 1, opp_overlap 1878959 TATTCAAGCACCAAA TACTCGGCGAC TAA GCCGCC-AGTA TCTAAGGTTTCTAAA Spea_1544 1881178 - 1880594 - | hypothetical protein Spea_1545 1881397 - 1882620 + | LolC/E family lipoprotein releasing system, transmembrane protein TERM 2163 1883306 - 1883327 + G 74 -7.2 -4.35483 | GCTGATCACCGAGCT TGCGGCGC AGCTTG GCACCGCA TTTGTTGTGGTCACC Spea_1546 1882713 - 1883429 + | lipoprotein releasing system, ATP-binding protein Spea_1547 1883426 - 1884679 + | LolC/E family lipoprotein releasing system, transmembrane protein TERM 2164 1884729 - 1884694 - T 88 -10.6 -3.98083 | opp_overlap 1884700 1884704, overlap 1884698 1884700 1884704 GAGGTAATTGATAAA TACAGATAAAGCCAGC GGAT GCTGGCTTTATTTCTA ACTGCTATTGCTTAA TERM 2165 1884725 - 1884698 - T 85 -11.4 -3.36059 | opp_overlap 1884700 1884704, overlap 1884694 1884700 1884704 TAATTGATAAATACA GATAAAGCCAGC GGAT GCTGGCTTTATT TCTAACTGCTATTGC TERM 2166 1884700 - 1884723 + T 100 -14 -3.94811 | opp_overlap 1884698 1884694 1884700 1884704, overlap 1884704 ATTGATAAATACAGA TAAAGCCAGC GGAT GCTGGCTTTA TTTCTAACTGCTATT TERM 2167 1884723 - 1884700 - T 93 -14 -3.23737 | opp_overlap 1884700 1884704, overlap 1884698 1884694 1884704 ATTGATAAATACAGA TAAAGCCAGC GGAT GCTGGCTTTA TTTCTAACTGCTATT TERM 2168 1884704 - 1884719 + T 91 -10.4 -4.57482 | opp_overlap 1884700 1884698 1884694 1884704, overlap 1884700 ATAAATACAGATAAA GCCAGC GGAT GCTGGC TTTATTTCTAACTGC TERM 2169 1884719 - 1884704 - T 89 -10.4 -4.25527 | opp_overlap 1884704 1884700, overlap 1884700 1884698 1884694 ATAAATACAGATAAA GCCAGC GGAT GCTGGC TTTATTTCTAACTGC Spea_1548 1885114 - 1884734 - | hypothetical protein Spea_1549 1885454 - 1886368 + | hypothetical protein TERM 2170 1886431 - 1886409 - f 70 -9.1 -3.21595 | opp_overlap 1886410 1886421, overlap 1886396 1886410 AAGCCCTATTACCAA GGCCTCGTC ATTTA GACGAGGCT TTTTTGTCTATATCT TERM 2171 1886430 - 1886410 - f 83 -12.6 -2.52635 | opp_overlap 1886410 1886421, overlap 1886396 1886409 AGCCCTATTACCAAG GCCTCGTC ATTTA GACGAGGC TTTTTTGTCTATATC TERM 2172 1886410 - 1886430 + F 100 -12.6 -5.4492 | opp_overlap 1886396 1886410 1886409, overlap 1886421 AGCCCTATTACCAAG GCCTCGTC ATTTA GACGAGGC TTTTTTGTCTATATC Spea_1550 1886539 - 1886757 + | hypothetical protein TERM 2173 1886949 - 1886931 - f 76 -7.4 -4.17355 | opp_overlap 1886931, overlap 1886927 1886926 TAAACAACAAGCAAA CCAAGAGA TAG TCACTTGG TTTAAGCAATATCTA Spea_1551 1887020 - 1887259 + | hypothetical protein TERM 2174 1887368 - 1887386 + F 100 -6.7 -6.15259 | opp_overlap 1887368 AATAATTCTTAAAAG CGCAGCT TAGAT AGTTGCG TTTTTTTTTGGCTTA TERM 2175 1887863 - 1887845 - g 73 -7.4 -4.08767 | overlap 1887848 CTTATTGCGGTAAAA CAAGCACA GGC TGAGCTTG ACCAAGCACTGGAGT Spea_1552 1887593 - 1888642 + | secretion protein HlyD family protein Spea_1553 1888721 - 1889779 + | hypothetical protein TERM 2176 1889921 - 1889944 + GT 70 -9.6 -2.50816 | overlap 1889920 CCATGGCGGTGAGAT GCCTCAGCAA GGAC TTGCTGAGGG GTTACTGCGTGAACG Spea_1554 1889751 - 1890212 + | regulatory protein MarR TERM 2177 1890271 - 1890227 - T 79 -8.8 -4.11394 | gap 2, opp_overlap 1890227, overlap 1890228 ATGTTATCGGCAAAA TTTTGGAGGACCTAGGACCTAG GAC CTAGGACCTAGGACCT--AAAA GCTGTTAGCACTCGA TERM 2178 1890271 - 1890228 - T 75 -10.4 -3.06515 | gap 1, opp_overlap 1890227, overlap 1890227 TGTTATCGGCAAAAT TTTGGAGGACCTAGGACCTAG GAC CTAGGACCTAGGACCTA-AAA GCTGTTAGCACTCGA Spea_1555 1890933 - 1890346 - | hypothetical protein TERM 2179 1890514 - 1890556 + g 77 -10.8 -3.34398 | gap 1, opp_overlap 1890507, overlap 1890513 TAAAACAGCGGCAAG TTGCGGTGCA-TGAGCCAA TAACGC TTGGCTCAGTGTGTCGCAA TCTTTAGCGCCGCAG Spea_1556 1891498 - 1890983 - | hypothetical protein Spea_1557 1891712 - 1892545 + | Ion transport protein Spea_1558 1892573 - 1894123 + | MATE efflux family protein TERM 2180 1894172 - 1894182 + T 73 -2.4 -5.24551 | GCCGATATTTAGTTA GCTG ACG CCGC TTTTTCTTCGTTTGC Spea_1559 1894398 - 1894165 - | hypothetical protein Spea_1560 1894692 - 1895006 + | hypothetical protein TERM 2181 1895270 - 1895245 - g 72 -4.7 -4.68424 | gap 1, overlap 1895234 CAAGCGACGGAAAAA GCCGC-CGAACA AAA TGTTCGAGTAGC GCTTATCCGTGCTGC Spea_1561 1895194 - 1895838 + | TetR family transcriptional regulator TERM 2182 1895874 - 1895890 + G 82 -7.9 -4.55625 | CGATGGTATTTCTTT CCTGCGG TCG CCGTGGG TTTTGTGGTGTTGGT Spea_1562 1895838 - 1897193 + | RND family efflux transporter MFP subunit TERM 2183 1898331 - 1898341 + G 73 -4.6 -4.76644 | CCATTAACATCATGA CGCT GGT GGCG TTTTTGATGGCTATT Spea_1563 1897190 - 1900315 + | acriflavin resistance protein TERM 2184 1900342 - 1900366 + T 90 -8.5 -5.0925 | opp_overlap 1900342 AACAGATAACAAAAA GGCGTTAACCG TTA TGGATAGCGCC TTTTTAATTTTCAGC TERM 2185 1900366 - 1900342 - T 85 -5.6 -5.28561 | opp_overlap 1900342 AACAGATAACAAAAA GGCGTTAACC GTTAT GGATAGCGCC TTTTTAATTTTCAGC TERM 2186 1900388 - 1900407 + T 89 -12.2 -3.44319 | opp_overlap 1900388 ATTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 2187 1900407 - 1900388 - T 89 -12.2 -3.57263 | opp_overlap 1900388 ATTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 2188 1900524 - 1900509 - T 73 -2.4 -5.27335 | opp_overlap 1900521 1900523, overlap 1900511 TTGTTGAAAGAAAAA GGGCCC ATGG AGGCTC GCTTATCGCATCCCT TERM 2189 1900711 - 1900697 - T 73 -10 -2.84602 | opp_overlap 1900697 1900696, overlap 1900696 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTTATTTGGAACAG TERM 2190 1900697 - 1900711 + T 79 -10 -3.54488 | opp_overlap 1900696 1900697, overlap 1900696 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTTATTTGGAACAG TERM 2191 1900735 - 1900756 + T 77 -8.7 -3.90744 | opp_overlap 1900728 1900726 1900735 1900736, overlap 1900736 GGAACAGATAGCAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTGCAAGCGAG TERM 2192 1900756 - 1900735 - T 77 -8.7 -3.93383 | opp_overlap 1900735 1900736, overlap 1900728 1900726 1900736 GGAACAGATAGCAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTGCAAGCGAG TERM 2193 1900736 - 1900755 + T 82 -12.2 -2.94232 | opp_overlap 1900728 1900726 1900735 1900736, overlap 1900735 GAACAGATAGCAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTGCAAGCGA TERM 2194 1900755 - 1900736 - T 82 -12.2 -2.95307 | opp_overlap 1900736 1900735, overlap 1900728 1900726 1900735 GAACAGATAGCAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTGCAAGCGA Spea_1564 1901632 - 1900820 - | purine phosphorylase family 1 TERM 2195 1900902 - 1900915 + g 74 -8.1 -3.87075 | TCATAGACTAAGTGC GCCGA GCCA TCGGC TTTGTCAGAGATAGT Spea_1565 1901963 - 1902373 + | hypothetical protein TERM 2196 1902412 - 1902449 + T 93 -10.6 -4.93696 | overlap 1902413 TCTCGTACCACTATG CGATGGGCGGTCACTG TAGTAT CAGTAACTGCCCATCA TTTTTCCTATTTAGC TERM 2197 1902413 - 1902448 + T 100 -14.1 -3.55133 | overlap 1902412 CTCGTACCACTATGC GATGGGCGGTCACTG TAGTAT CAGTAACTGCCCATC ATTTTTCCTATTTAG Spea_1566 1903436 - 1902474 - | integral membrane protein TerC TERM 2198 1903382 - 1903366 - G 74 -7.3 -4.24342 | CTTGTGAGCAATAAA TCGATGC CAA GCATCAA CAGAGTAAGTATGAC Spea_1567 1904304 - 1903852 - | putative lipoprotein Spea_1568 1905003 - 1904527 - | glutathione-dependent formaldehyde-activating GFA Spea_1569 1905740 - 1905297 - | UspA domain-containing protein Spea_1570 1906487 - 1907749 + | sodium:dicarboxylate symporter TERM 2199 1907773 - 1907802 + T 100 -13.7 -4.42974 | opp_overlap 1907773 CTTTTACCGCTAAAA GCCCTCGATTATC TAGT GATAGTTGAGGGC TTTGTTGTATCTAGA TERM 2200 1907802 - 1907773 - T 83 -9.3 -4.11216 | opp_overlap 1907773 CTTTTACCGCTAAAA GCCCTCGATTATC TAGT GATAGTTGAGGGC TTTGTTGTATCTAGA Spea_1571 1908595 - 1907819 - | band 7 protein Spea_1572 1910102 - 1908606 - | hypothetical protein TERM 2201 1909020 - 1909008 - G 71 -3.3 -4.7497 | GGTATCGAGTAAAAA CAGCG AGC CGATG GCAAAGGCAGCAATA TERM 2202 1909453 - 1909469 + g 83 -10.1 -4.17048 | TCGAGGGCCTCTTTT GCGGTGA GGG TCGCCGC TTCTTTTACGGCGAG TERM 2203 1910141 - 1910156 + H 70 -9 -3.22223 | TATGGTTAAGTTTAG TGCAGC TTTA GCTGCA TTGATGCTGAGATTG TERM 2204 1910778 - 1910763 - g 79 -3.2 -5.39755 | GATAACGATAAAAAA GGGC CTAGATGT GCCC ATAGCCGGTGAGCCT TERM 2205 1910878 - 1910866 - g 73 -7.7 -4.07885 | opp_overlap 1910854, overlap 1910854 1910853 1910851 TATGTTGGCTTAAAA CCAAC TAT GTTGG TTGAGGTGGGAGAGT TERM 2206 1910946 - 1910971 + G 72 -8.3 -3.82084 | GACTCCTGGTGTCAT CTATACTGCTC CCGC GAGCGGTAAAG TTATTGCTATTAACC Spea_1573 1910725 - 1912086 + | Na(+)-translocating NADH-quinone reductase subunit A TERM 2207 1912347 - 1912359 + G 76 -4.8 -4.85433 | GCAACGGCAGATGTT TGGC AATTA GCCA TTTTTAACTTTGTCT TERM 2208 1912449 - 1912468 + G 84 -8.6 -4.65263 | TATGCACCTATCTAC CTAACGGC ATTA GCTGTTAG TTTATTTTGGGAAAT Spea_1574 1912086 - 1913300 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 2209 1913470 - 1913484 + G 76 -5 -4.8048 | TTAAGAAAGATTCTT TTATGG GCA CCATGA TTTTTACTGTGACCC Spea_1575 1913448 - 1914227 + | Na(+)-translocating NADH-quinone reductase subunit C Spea_1576 1914231 - 1914854 + | Na(+)-translocating NADH-quinone reductase subunit D Spea_1577 1914863 - 1915471 + | Na(+)-translocating NADH-quinone reductase subunit E Spea_1578 1915527 - 1916744 + | Na(+)-translocating NADH-quinone reductase subunit F Spea_1579 1916786 - 1916887 + | NADH:ubiquinone oxidoreductase, subunit F Spea_1580 1916927 - 1917028 + | NADH:ubiquinone oxidoreductase, subunit F Spea_1581 1917069 - 1917170 + | NADH:ubiquinone oxidoreductase, subunit F TERM 2210 1917217 - 1917200 - f 100 -12.7 -4.39426 | opp_overlap 1917200 GAGAGCCCCATAAAA CGCAGCC TACA GGCTGCG TTTTTTTTATGTGTT TERM 2211 1917200 - 1917217 + F 100 -12.7 -6.08563 | opp_overlap 1917200 GAGAGCCCCATAAAA CGCAGCC TACA GGCTGCG TTTTTTTTATGTGTT TERM 2212 1918140 - 1918118 - g 71 -7.1 -4.04206 | gap 1 GGATCGGGAGACAAA GCCGTATATC AGGC GATA-ACGGC TTCACCTGCAAAAAT TERM 2213 1919271 - 1919286 + G 88 -7.5 -5.05228 | ATTTCACTGTCGACT CCGCG CCGGTA CGCGG TTTTTATGATTTAGT Spea_1582 1917383 - 1920538 + | hypothetical protein TERM 2214 1920611 - 1920644 + F 76 -11.1 -2.65354 | opp_overlap 1920611 1920612, overlap 1920608 TGTGACTATTTAAAA GCTGGTGATAGCAGG CTTA TCTGCTATCACTAGA TCAATTTGGAGTGAG TERM 2215 1920644 - 1920611 - f 77 -8.2 -4.21194 | opp_overlap 1920611 1920608, overlap 1920612 TGTGACTATTTAAAA GCTGGTGATAGCAG GCTTAT CTGCTATCACTAGA TCAATTTGGAGTGAG TERM 2216 1920643 - 1920612 - f 83 -11.7 -3.12395 | opp_overlap 1920611 1920608, overlap 1920611 GTGACTATTTAAAAG CTGGTGATAGCAG GCTTAT CTGCTATCACTAG ATCAATTTGGAGTGA Spea_1583 1920659 - 1920967 + | hypothetical protein Spea_1584 1921380 - 1923185 + | arylsulfotransferase TERM 2217 1923268 - 1923297 + T 84 -12.3 -3.02626 | opp_overlap 1923268 1923274, overlap 1923274 AATCGAGCACACAAA CAAAAATAGCGCC TTAA GGCGCTATTTTTA TATCTGTAACTCTTA TERM 2218 1923297 - 1923268 - T 100 -14.5 -4.09822 | opp_overlap 1923268 1923274, overlap 1923274 AATCGAGCACACAAA CAAAAATAGCGCC TTAA GGCGCTATTTTTA TATCTGTAACTCTTA TERM 2219 1923291 - 1923274 - T 100 -11.3 -5.42975 | opp_overlap 1923268 1923274, overlap 1923268 GCACACAAACAAAAA TAGCGCC TTAA GGCGCTA TTTTTATATCTGTAA TERM 2220 1923274 - 1923291 + T 95 -11.3 -5.07275 | opp_overlap 1923274 1923268, overlap 1923268 GCACACAAACAAAAA TAGCGCC TTAA GGCGCTA TTTTTATATCTGTAA TERM 2221 1923349 - 1923359 + T 73 -8.2 -3.92592 | opp_overlap 1923349 GCGGTGCTTTAACGA GCGG TTG CCGC TTTCATATTGCGAGT Spea_1585 1924151 - 1923342 - | tryptophan synthase subunit alpha Spea_1586 1925391 - 1924162 - | tryptophan synthase subunit beta Spea_1587 1926915 - 1925488 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase Spea_1588 1927993 - 1926917 - | anthranilate phosphoribosyltransferase Spea_1589 1928609 - 1927995 - | anthranilate synthase component II Spea_1590 1930189 - 1928606 - | anthranilate synthase component I TERM 2222 1930304 - 1930336 + H 100 -20.8 -3.23183 | opp_overlap 1930304 1930307 1930311, overlap 1930307 1930311 ATTTTCGCTTAGATA CAAGAAAGCCCGCA GTGTA TGCGGGCTTTCTTG TTGAATCTTGTCTCA TERM 2223 1930336 - 1930304 - H 100 -20.8 -2.87211 | opp_overlap 1930304 1930307 1930311, overlap 1930307 1930311 ATTTTCGCTTAGATA CAAGAAAGCCCGCA GTGTA TGCGGGCTTTCTTG TTGAATCTTGTCTCA TERM 2224 1930307 - 1930333 + H 100 -16.7 -3.74542 | opp_overlap 1930304 1930307 1930311, overlap 1930304 1930311 TTCGCTTAGATACAA GAAAGCCCGCA GTGTA TGCGGGCTTTC TTGTTGAATCTTGTC TERM 2225 1930333 - 1930307 - H 100 -16.7 -3.58726 | opp_overlap 1930307 1930304 1930311, overlap 1930304 1930311 TTCGCTTAGATACAA GAAAGCCCGCA GTGTA TGCGGGCTTTC TTGTTGAATCTTGTC TERM 2226 1930329 - 1930311 - H 95 -11.7 -4.42974 | opp_overlap 1930307 1930304 1930311, overlap 1930307 1930304 CTTAGATACAAGAAA GCCCGCA GTGTA TGCGGGC TTTCTTGTTGAATCT TERM 2227 1930311 - 1930329 + H 95 -11.7 -4.47456 | opp_overlap 1930311 1930307 1930304, overlap 1930307 1930304 CTTAGATACAAGAAA GCCCGCA GTGTA TGCGGGC TTTCTTGTTGAATCT TERM 2228 1931262 - 1931251 - g 73 -2.2 -5.1356 | CTGGAGCAATAAAAA CCTC AGAG GAAG CGATGGATAGCTACG Spea_1591 1930887 - 1931621 + | hypothetical protein TERM 2229 1931725 - 1931758 + G 72 -5.1 -4.64952 | opp_overlap 1931724 CGGGGTGCTTAAAAG GCCCGTGGCGAATTG GCGC CGGGTTGCCGCTGGC TTTGTTTATGTGATT Spea_1592 1931621 - 1932406 + | hypothetical protein TERM 2230 1932485 - 1932471 - g 72 -8.5 -3.72576 | GCGGCTCGTAGTAAA GGCGC TACTG GCGCC ACAGTGATTAACCAT Spea_1593 1932396 - 1932746 + | putative nitrogen regulatory protein P-II TERM 2231 1932946 - 1932932 - g 72 -2.8 -5.04385 | GACATTGCCAAAAAA GTATTG GCA CAAGAC AGATCGCCTGAGCGA Spea_1594 1932743 - 1933150 + | signal-transduction protein Spea_1595 1933349 - 1934158 + | regulatory protein RecX Spea_1596 1934776 - 1934192 - | hypothetical protein Spea_1597 1935129 - 1935680 + | PEBP family protein TERM 2232 1935749 - 1935780 + T 100 -14.6 -4.20531 | opp_overlap 1935755, overlap 1935755 GCGAGAAATTGATAT GAAAAAGGCAGCAT ATAT ATGCTGCCTTTTGC TTTTAGCTCACTGTC TERM 2233 1935774 - 1935755 - T 100 -12.2 -4.82154 | opp_overlap 1935749 1935755 AATTGATATGAAAAA GGCAGCAT ATAT ATGCTGCC TTTTGCTTTTAGCTC TERM 2234 1935755 - 1935774 + T 100 -12.2 -4.68645 | opp_overlap 1935755, overlap 1935749 AATTGATATGAAAAA GGCAGCAT ATAT ATGCTGCC TTTTGCTTTTAGCTC Spea_1598 1936203 - 1935847 - | glutaredoxin Spea_1599 1936948 - 1936292 - | peptidase S51 dipeptidase E Spea_1600 1940358 - 1937137 - | hypothetical protein TERM 2235 1938826 - 1938814 - G 72 -9.1 -3.59979 | opp_overlap 1938813 1938812 TTGCGGCAGGGCAAA CTCGG TTA CCGAG ACTTTGGCATTCACT TERM 2236 1939227 - 1939242 + g 76 -4.6 -4.93547 | GCTTAGGAGCCTGTG CCTGGG TGAA CACAGG TTTTTCATTGATTGG Spea_1601 1940724 - 1941431 + | hypothetical protein TERM 2237 1941488 - 1941473 - f 85 -9 -4.27483 | opp_overlap 1941473, overlap 1941468 ACTGATAAAATTAAA GAGAGC TTCG GCTCTC TTTTTTGTTGCTGTC TERM 2238 1941473 - 1941488 + F 100 -9 -5.5353 | opp_overlap 1941473 1941468 ACTGATAAAATTAAA GAGAGC TTCG GCTCTC TTTTTTGTTGCTGTC Spea_1602 1941605 - 1941967 + | glyoxalase/bleomycin resistance protein/dioxygenase Spea_1603 1942164 - 1942508 + | 5-carboxymethyl-2-hydroxymuconate isomerase TERM 2239 1942570 - 1942587 + F 88 -7.7 -5.10064 | opp_overlap 1942570 1942565 1942572 ATCGCGACAATAAAA GTCACTC AAAT GAGTGGC TTTTTATATATTGAG TERM 2240 1942587 - 1942570 - f 75 -5.5 -4.77567 | opp_overlap 1942570, overlap 1942565 1942572 ATCGCGACAATAAAA GTCACTC AAAT GAGTGGC TTTTTATATATTGAG Spea_1604 1942884 - 1943606 + | hypothetical protein TERM 2241 1943628 - 1943642 + T 82 -8.5 -4.26189 | opp_overlap 1943628 TAAGGGAAAAACAAA GCGCC AATTA GGCGC TTTTGGGGTTTATAA TERM 2242 1943642 - 1943628 - T 90 -8.5 -4.91473 | opp_overlap 1943628 TAAGGGAAAAACAAA GCGCC AATTA GGCGC TTTTGGGGTTTATAA Spea_1605 1945626 - 1943701 - | FAD dependent oxidoreductase Spea_1606 1945794 - 1947068 + | Beta-ketoacyl synthase TERM 2243 1947118 - 1947103 - f 85 -9 -4.27861 | opp_overlap 1947103 AAGATAGATTGAAAA GGAAGC CTAG GCTTCC TTTTTTTGTGTCTTG TERM 2244 1947103 - 1947118 + F 100 -9 -5.80248 | opp_overlap 1947103 AAGATAGATTGAAAA GGAAGC CTAG GCTTCC TTTTTTTGTGTCTTG Spea_1607 1947207 - 1947566 + | hypothetical protein Spea_1608 1948666 - 1947713 - | LysR family transcriptional regulator TERM 2245 1948179 - 1948197 + g 72 -8.2 -3.6943 | opp_overlap 1948179 1948178 GAGGCACAGACAAAT CTTTGGTT TTT AGCCAAAG TTATCATTTTCAATG TERM 2246 1948594 - 1948614 + g 100 -13.3 -4.42386 | opp_overlap 1948592, overlap 1948595 GAGTAATATTTAACG TCCTAGCCG CAT CGGCTAGGG TTTTATGGCTGGCGA TERM 2247 1948595 - 1948613 + g 90 -14.6 -3.2511 | opp_overlap 1948592, overlap 1948594 AGTAATATTTAACGT CCTAGCCG CAT CGGCTAGG GTTTTATGGCTGGCG Spea_1609 1948811 - 1949977 + | alanine racemase domain-containing protein Spea_1610 1949979 - 1950920 + | ornithine cyclodeaminase TERM 2248 1950959 - 1950934 - T 76 -8.9 -3.69092 | opp_overlap 1950935, overlap 1950935 AATATTAAGGTCAAA GGGCCAGTAGC AATT GCTGCTGGCCT TTATTGTTCATGAAT TERM 2249 1950958 - 1950935 - T 83 -12.4 -2.80732 | opp_overlap 1950935, overlap 1950934 ATATTAAGGTCAAAG GGCCAGTAGC AATT GCTGCTGGCC TTTATTGTTCATGAA TERM 2250 1950935 - 1950958 + T 100 -14.6 -4.48713 | opp_overlap 1950935 1950934 ATATTAAGGTCAAAG GGCCAGTAGC AATT GCTGCTGGCC TTTATTGTTCATGAA Spea_1611 1951572 - 1951141 - | GCN5-related N-acetyltransferase TERM 2251 1951677 - 1951656 - H 90 -10.1 -4.4017 | overlap 1951631 CTAATTCCGATAAAA CGCTCGCTA GATA TAGCGTGCG AGTAAAACTTATTGT Spea_1612 1951920 - 1953053 + | D-isomer specific 2-hydroxyacid dehydrogenase catalytic region Spea_1613 1953056 - 1954072 + | aspartate-semialdehyde dehydrogenase TERM 2252 1954130 - 1954153 + T 100 -13.2 -5.27923 | opp_overlap 1954132 TGACGGTTTTTACTA GACCAGTAGC TTCT GCTGCTGGTC TTTTTTATGCACTTG Spea_1614 1954879 - 1954127 - | integrase catalytic region TERM 2253 1954236 - 1954225 - G 72 -3 -4.9792 | CATTGTATATAAAAA TTGA CTCC TCAA CGAGTTGCTTTAACT TERM 2254 1954623 - 1954610 - G 72 -6.7 -4.28111 | opp_overlap 1954609 TATATCACTAACAAA CACCT CTTC AGGTG CTGTTGGCACTAACT Spea_1615 1955361 - 1954963 - | transposase TERM 2255 1955396 - 1955368 - H 86 -9.8 -3.97947 | gap 1, opp_overlap 1955376 TGTAGTCATTATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACAAAGAAAACA TERM 2256 1955447 - 1955405 - H 100 -19.5 -4.29304 | opp_overlap 1955410 1955418, overlap 1955410 1955418 TCAGGACAAGACAAA GAAAACATAAAAAGCCCGC TAATT GCGGGCTTTTTATGTTTTA AAGATGTGAACAGTA TERM 2257 1955410 - 1955442 + H 100 -19.4 -4.13014 | opp_overlap 1955405 1955410 1955418, overlap 1955418 ACAAGACAAAGAAAA CATAAAAAGCCCGC TAATT GCGGGCTTTTTATG TTTTAAAGATGTGAA TERM 2258 1955442 - 1955410 - H 100 -19.4 -5.11389 | opp_overlap 1955410 1955418, overlap 1955405 1955418 ACAAGACAAAGAAAA CATAAAAAGCCCGC TAATT GCGGGCTTTTTATG TTTTAAAGATGTGAA TERM 2259 1955418 - 1955434 + H 100 -10.8 -5.28983 | opp_overlap 1955410 1955405 1955418, overlap 1955410 AAGAAAACATAAAAA GCCCGC TAATT GCGGGC TTTTTATGTTTTAAA TERM 2260 1955434 - 1955418 - H 100 -10.8 -5.34632 | opp_overlap 1955418 1955410, overlap 1955410 1955405 AAGAAAACATAAAAA GCCCGC TAATT GCGGGC TTTTTATGTTTTAAA TERM 2261 1955687 - 1955664 - g 76 -5.2 -4.7497 | CTGAGCCATTAAAAA TTACAGGGCC AGAT GGCCAAGTAA GACTCAATGAGCAGA TERM 2262 1956295 - 1956277 - g 78 -5.3 -5.00196 | gap 1, overlap 1956289 GCTTAAAGAAGAAAA TGCGCTGC TAAA GCAG-GCA CTACAAGATACTAAA Spea_1616 1955564 - 1958437 + | hypothetical protein TERM 2263 1958471 - 1958453 - f 70 -5.8 -4.41047 | opp_overlap 1958455, overlap 1958454 1958455 ATTCCTCAACTAAAA TCGGCGCC TTT GGCGCCTT TTTTATACTTATCGT TERM 2264 1958470 - 1958454 - f 70 -9.3 -3.24146 | opp_overlap 1958455, overlap 1958453 1958455 TTCCTCAACTAAAAT CGGCGCC TTT GGCGCCT TTTTTATACTTATCG TERM 2265 1958455 - 1958469 + F 100 -12.8 -5.39755 | opp_overlap 1958455 1958454 1958453 TCCTCAACTAAAATC GGCGCC TTT GGCGCC TTTTTTATACTTATC TERM 2266 1958469 - 1958455 - f 83 -12.8 -2.54166 | opp_overlap 1958455, overlap 1958454 1958453 TCCTCAACTAAAATC GGCGCC TTT GGCGCC TTTTTTATACTTATC TERM 2267 1959293 - 1959308 + G 70 -9 -3.45324 | opp_overlap 1959280, overlap 1959290 AGCCGCAGCAACTGC CAAGCC TAAC GGCTTG TATTTAGTGGACGTG Spea_1617 1958601 - 1959386 + | tRNA pseudouridine synthase A Spea_1618 1959484 - 1960749 + | FolC bifunctional protein TERM 2268 1961330 - 1961320 - g 74 -6.8 -4.26019 | GAATGATATTGAAAA GCTG ACG CAGC TAAAAGGTCGTGTAG Spea_1619 1960742 - 1961371 + | sporulation domain-containing protein Spea_1620 1961487 - 1961975 + | colicin V production protein Spea_1621 1962075 - 1963589 + | amidophosphoribosyltransferase TERM 2269 1963631 - 1963653 + T 100 -11.3 -5.42131 | opp_overlap 1963631 GACGGTTTTTATTAA GCCAGTTGG AACTC CCGACTGGC TTTTTTATGTACTTC TERM 2270 1963653 - 1963631 - T 73 -9.8 -3.14344 | opp_overlap 1963631 GACGGTTTTTATTAA GCCAGTTGGA ACT CCCGACTGGC TTTTTTATGTACTTC Spea_1622 1964355 - 1963627 - | integrase catalytic region TERM 2271 1964472 - 1964505 + r 80 -2.4 -5.64274 | overlap 1964473 ACTTTATGGTGCCTT TTACTTTGGCGAAC CAGAGC GTTCGGCTAAGTAC TTTTTTTCTAAATCG Spea_1623 1964855 - 1964472 - | transposase TERM 2272 1964915 - 1964932 + r 100 -12.7 -5.80951 | opp_overlap 1964915 TTGTTATGTTTAAAA GCCGAGC ATCT GCTCGGC TTTTTTGTTTTCAGT TERM 2273 1964932 - 1964915 - R 93 -12.7 -4.11216 | opp_overlap 1964915 TTGTTATGTTTAAAA GCCGAGC ATCT GCTCGGC TTTTTTGTTTTCAGT Spea_1624 1965274 - 1965008 - | hypothetical protein Spea_1625 1965468 - 1967486 + | DNA topoisomerase III Spea_1626 1967581 - 1968459 + | AraC family transcriptional regulator Spea_1627 1968625 - 1970703 + | hypothetical protein TERM 2274 1970733 - 1970783 + F 73 -8.5 -3.63707 | gap 2, opp_overlap 1970732 1970741 1970743 TTAGCCTATAAAGAT GCT-AAG-CAGAGTAGGTTAAGTCG CAA TGGCTTAACCTACTCGGTCTAAAGC TTTGACGCTTATCTT TERM 2275 1970773 - 1970741 - f 91 -13.6 -2.76249 | opp_overlap 1970733, overlap 1970732 1970743 TAAAGATGCTAAGCA GAGTAGGTTAAGTC GCAAT GGCTTAACCTACTC GGTCTAAAGCTTTGA TERM 2276 1970771 - 1970743 - f 73 -10.4 -2.92018 | opp_overlap 1970733, overlap 1970741 1970732 AAGATGCTAAGCAGA GTAGGTTAAGTC GCAAT GGCTTAACCTAC TCGGTCTAAAGCTTT Spea_1628 1970873 - 1972909 + | putative alpha-glucosidase TERM 2277 1973005 - 1972970 - T 100 -12.6 -5.24416 | opp_overlap 1972970 GAACCATAACAAAAA GGGAAGCCTTAGCTGT GTTC ACAGTCTAGGCTTCCC TTTTTTTATTTATTG TERM 2278 1972970 - 1973005 + T 100 -12.6 -6.08342 | opp_overlap 1972970 GAACCATAACAAAAA GGGAAGCCTTAGCTGT GTTC ACAGTCTAGGCTTCCC TTTTTTTATTTATTG Spea_1629 1974908 - 1973037 - | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 2279 1974044 - 1974032 - G 72 -6.3 -4.25104 | GTGGCGCGAGTAAAA TGGTT AAG AACCA TGAGATAGCTAGGAC Spea_1630 1976077 - 1975184 - | LysR family transcriptional regulator TERM 2280 1977343 - 1977359 + G 71 -10.1 -3.24597 | overlap 1977351 CAGGCCGCGTCACGC CTACGGG GTG CCCGTGG TATTCATTACAAATT Spea_1631 1976323 - 1977417 + | galactose-1-phosphate uridylyltransferase Spea_1632 1977417 - 1978601 + | galactokinase Spea_1633 1978879 - 1978685 - | hypothetical protein TERM 2281 1978795 - 1978784 - G 74 -5.8 -4.55625 | opp_overlap 1978783 1978784 ATCAAGATCATAAAA CAGC GCCT GCTG ATCTTTACAGTTTAA TERM 2282 1979042 - 1979022 - R 100 -14.1 -5.81412 | TTGAGGCAAAAAAAA GCAAGCCTT GAT AAGGCTTGC GAAAGTGATACAGGT Spea_1634 1980405 - 1979104 - | alpha/beta hydrolase fold TERM 2283 1981107 - 1981123 + G 76 -4.4 -5.02074 | gap 1 ATTGCCCAGGTCATA CACC-CG GCCA CGTGGTG TTTTTTGCCCAATCG Spea_1635 1980710 - 1981354 + | beta-lactamase domain-containing protein TERM 2284 1981433 - 1981458 + F 95 -11.9 -4.52857 | gap 1, opp_overlap 1981435 GCTAAATACCGTTAA CAG-CCCCTCGT AAA GCGAGGGGGCTG TTTTATATCAGGACT Spea_1636 1981782 - 1982270 + | hypothetical protein TERM 2285 1983087 - 1983103 + G 81 -8.1 -4.49556 | TTGGCCGACGGTGAT TTAAGTC AAA GACTTAA TTTCTTTGGTAAAGA Spea_1637 1982571 - 1984019 + | methyl-accepting chemotaxis sensory transducer TERM 2286 1984126 - 1984109 - T 100 -11.3 -5.46629 | opp_overlap 1984109 AATATGTTAAAAAAA TGCCAGC TATT GCTGGCA TTTTTTATGTTGATC TERM 2287 1984109 - 1984126 + T 100 -11.3 -5.49569 | opp_overlap 1984109 AATATGTTAAAAAAA TGCCAGC TATT GCTGGCA TTTTTTATGTTGATC Spea_1638 1984991 - 1984185 - | exonuclease III TERM 2288 1984299 - 1984281 - G 78 -11.8 -3.05596 | GAGGCGCTCAGCCAA TGTCTTGG TAG CCAAGACA ACGTCGATGCGTAGG Spea_1639 1985309 - 1985010 - | YciI-like protein Spea_1640 1985854 - 1985309 - | intracellular septation protein A TERM 2289 1985927 - 1985941 + r 75 -10 -3.17075 | opp_overlap 1985921 1985927 GGGGAAAAAGTGAAA GCCGAT AGC ATCGGC TTGGATTAGAGCGGA TERM 2290 1985941 - 1985927 - R 86 -10 -3.99805 | opp_overlap 1985927, overlap 1985921 GGGGAAAAAGTGAAA GCCGAT AGC ATCGGC TTGGATTAGAGCGGA Spea_1641 1986315 - 1986010 - | hypothetical protein Spea_1642 1986539 - 1986976 + | TonB family protein TERM 2291 1986971 - 1986957 - T 77 -8.6 -3.79519 | AATGTCAGCAGCAAA CGCAAT TAA ATTGCG GCTAGTCTAAAGTAC Spea_1643 1988437 - 1987034 - | cytochrome c family protein TERM 2292 1988242 - 1988292 + g 95 -11 -4.70659 | TAAATGCGATGGAGT GCATTGAGCCCTGCCAGCCTTGCC ATT GGCGAGGGTGGCAGCCCTTACAGC TTTTTGCATCTCGCC Spea_1644 1988870 - 1989748 + | phosphotransferase domain-containing protein Spea_1645 1989745 - 1990365 + | Sua5/YciO/YrdC/YwlC family protein TERM 2293 1990564 - 1990582 + G 100 -10.3 -4.87273 | AAAGACCTTTTTATT CCTCCAG AAGCG CTGGAGG TTTTTCTAGAGTCTT TERM 2294 1991216 - 1991241 + G 71 -6.9 -4.1721 | TGGTTAAGGAATTGC TGGTTGAGCTT GTAC AAGCTGAGCCA TTTTCAACTATACAT Spea_1646 1990483 - 1991271 + | chromosome segregation and condensation protein ScpA TERM 2295 1991555 - 1991536 - g 74 -7.2 -4.20368 | gap 1 CTATGGCAAGAGAAA GCAC-CGAA GTA TTCGCGTGC AACCTTAGAAACCCT Spea_1647 1991272 - 1991868 + | segregation and condensation protein B Spea_1648 1991861 - 1992733 + | pseudouridine synthase TERM 2296 1992802 - 1992784 - T 100 -14.6 -4.22948 | opp_overlap 1992784 AAAACGCATTTAAAA GGCCGCTA TTT TAGCGGCC TTTTTGTATATAATG TERM 2297 1992784 - 1992802 + T 100 -14.6 -5.05601 | opp_overlap 1992784 AAAACGCATTTAAAA GGCCGCTA TTT TAGCGGCC TTTTTGTATATAATG Spea_1649 1993590 - 1992853 - | short chain dehydrogenase Spea_1650 1993853 - 1996351 + | hypothetical protein TERM 2298 1996417 - 1996398 - f 93 -7.8 -5.41746 | opp_overlap 1996400, overlap 1996400 AATTGTGTAAAAAAA GACCCAGC GAAA GCTGGGTT TTTTATTGCCATGTT TERM 2299 1996400 - 1996415 + F 100 -10.4 -5.46657 | opp_overlap 1996398 1996400 TTGTGTAAAAAAAGA CCCAGC GAAA GCTGGG TTTTTTATTGCCATG TERM 2300 1996415 - 1996400 - f 90 -10.4 -4.34482 | opp_overlap 1996400, overlap 1996398 TTGTGTAAAAAAAGA CCCAGC GAAA GCTGGG TTTTTTATTGCCATG TERM 2301 1997010 - 1997022 + G 79 -10.5 -3.54951 | opp_overlap 1997007, overlap 1997021 GCGTTGACAAAGTGG CCGCC AGT GGCGG TTATATGATGGCCTG Spea_1651 1996502 - 1997530 + | putative periplasmic protease TERM 2302 1997551 - 1997581 + T 77 -10.6 -2.7566 | opp_overlap 1997559, overlap 1997559 ACTCGGTTTACCACC AGAAAAAACCTGCA CTT TGCAGGTTTTTTTA TGCTTAGAATTAAGT TERM 2303 1997573 - 1997559 - T 100 -10 -5.32882 | opp_overlap 1997551 1997559 TACCACCAGAAAAAA CCTGCA CTT TGCAGG TTTTTTTATGCTTAG TERM 2304 1997559 - 1997573 + T 100 -10 -5.71983 | opp_overlap 1997559, overlap 1997551 TACCACCAGAAAAAA CCTGCA CTT TGCAGG TTTTTTTATGCTTAG TERM 2305 1997711 - 1997697 - T 70 -8.6 -3.34192 | AAGCGTTTTAAGCAA TCAAGC GGT GCTTGA TAAAAGTCGTGGCGC TERM 2306 1997903 - 1997876 - T 82 -10.6 -3.53012 | overlap 1997880 TCCTGCCCCGCGAAA GCTATGCCCACA TCCA TGTGGGCATTAC GACTATTTCTTCAAC TERM 2307 1997899 - 1997880 - T 81 -12.2 -2.64155 | overlap 1997876 GCCCCGCGAAAGCTA TGCCCACA TCCA TGTGGGCA TTACGACTATTTCTT TERM 2308 1997998 - 1998033 + T 71 -6.2 -4.20136 | opp_overlap 1997998, overlap 1997999 TGAGTTATGACTATA GCCCTAGCTCGTTTTT GGAC AAAAGTGAGCTAGGAA TTTGATTTTAAGCAT TERM 2309 1997999 - 1998032 + T 73 -9.7 -3.11359 | opp_overlap 1997998, overlap 1997998 GAGTTATGACTATAG CCCTAGCTCGTTTTT GGAC AAAAGTGAGCTAGGA ATTTGATTTTAAGCA TERM 2310 1998550 - 1998565 + T 76 -3.2 -5.24551 | opp_overlap 1998541 ACAATAGTGGCTAAC GCCC ACGTTAAG GGGC TTTTTATTAGTTTGC Spea_1652 1999499 - 1999188 - | hypothetical protein Spea_1653 1999942 - 2000979 + | transposase IS116/IS110/IS902 family protein TERM 2311 2001476 - 2001455 - f 75 -9.5 -3.39488 | overlap 2001450 CAAAGATAAATGTAA TCAGCCTTC ATTC GAAGGCTAA CCAACTTTGGGGCAA TERM 2312 2002373 - 2002351 - g 91 -8.6 -5.0065 | opp_overlap 2002351 GATCTAGAAACAAAA GATAATAGTT CTG AACTACTATC TTTAAATCAATTCTC Spea_1654 2002234 - 2002935 + | hypothetical protein TERM 2313 2003543 - 2003513 - f 87 -6.3 -5.26918 | gap 1, overlap 2003514 2003518 ACAGCTCAGAAAAAA TGTAATCAGCCTTC ATTC GAAGGCTAACT-CA CCTTGTTGTACTTAG TERM 2314 2003539 - 2003518 - f 77 -9.5 -3.55457 | overlap 2003513 2003514 TCAGAAAAAATGTAA TCAGCCTTC ATTC GAAGGCTAA CTCACCTTGTTGTAC TERM 2315 2004317 - 2004333 + G 71 -9.5 -3.29144 | GCTGCAAAAGAGGCT GGCATAA CAA TTATGCC TTATAACAACCCTGA Spea_1655 2003873 - 2004841 + | dihydrodipicolinate synthetase TERM 2316 2004868 - 2004884 + F 100 -10.1 -5.67283 | opp_overlap 2004862 2004868 CTTCAAAAAGAGAAA GCTCCGT TTT ACGGGGC TTTTTTGTTTGCCTT TERM 2317 2004884 - 2004868 - f 82 -7.9 -4.55887 | opp_overlap 2004868, overlap 2004862 CTTCAAAAAGAGAAA GCTCCGT TTT ACGGGGC TTTTTTGTTTGCCTT Spea_1656 2005072 - 2006100 + | AraC family transcriptional regulator Spea_1657 2007305 - 2006118 - | hypothetical protein TERM 2318 2007375 - 2007358 - R 100 -14.1 -4.89852 | opp_overlap 2007358 CTAGAGTTAGAAAAA GGCCGGG AGTC CCCGGCC TTTTTATCGATAAGA TERM 2319 2007358 - 2007375 + r 100 -14.1 -4.87665 | opp_overlap 2007358 CTAGAGTTAGAAAAA GGCCGGG AGTC CCCGGCC TTTTTATCGATAAGA TERM 2320 2007420 - 2007469 + r 70 -8.8 -3.35813 | gap 1, opp_overlap 2007430 2007431 2007433, overlap 2007425 TAGTTTTTGATACTA GCTGTGCAAATTAGCAGTGCAAA TTAGC TTTGCA-TGCTAGTTAGAGCAGC TTGCTTGAGGTAGGC Spea_1658 2010110 - 2007456 - | hypothetical protein TERM 2321 2009361 - 2009351 - G 72 -5.4 -4.44284 | overlap 2009353 AATCGAATACCAAAA TACC ACC GGTA TTGCCCATGGCTTCG TERM 2322 2010190 - 2010217 + rH 84 -2.2 -5.75342 | gap 1, opp_overlap 2010190, overlap 2010198 GTGAAATGTGGACAA CAATTCATTAACA TTG TGTTA-TCAATTG TTTTTTTTGGACGGA TERM 2323 2010288 - 2010267 - RH 80 -6 -4.7078 | TTAACTACTGAAAAA TAATGTGA ACAAAG TCACATTA AAACGCGCGTATGGA TERM 2324 2010371 - 2010399 + rH 86 -10.3 -3.98804 | opp_overlap 2010373, overlap 2010373 TAGTGGGCAAAAAAA AATCCCTGCCATG GCT CATAGCAGGGATC TTGTTTGACGTTTAA TERM 2325 2010373 - 2010397 + rH 95 -12.9 -3.57619 | opp_overlap 2010373, overlap 2010371 GTGGGCAAAAAAAAA TCCCTGCCATG GCT CATAGCAGGGA TCTTGTTTGACGTTT TERM 2326 2010397 - 2010373 - RH 100 -15.1 -6.06723 | opp_overlap 2010373 2010371 GTGGGCAAAAAAAAA TCCCTGCCATG GCT CATAGCAGGGA TCTTGTTTGACGTTT TERM 2327 2011424 - 2011449 + rH 73 -9.7 -3.19463 | overlap 2011426 ATCGTATTTTACATC TGCCGGTGGAT AAAG ATCCGCCGGTG TTACTGACTGCTGAG TERM 2328 2011426 - 2011447 + rH 85 -12.3 -3.15996 | overlap 2011424 CGTATTTTACATCTG CCGGTGGAT AAAG ATCCGCCGG TGTTACTGACTGCTG Spea_1660 2012324 - 2011695 - | arylesterase Spea_1661 2012305 - 2013048 + | ABC transporter related Spea_1662 2013039 - 2015492 + | hypothetical protein TERM 2329 2015536 - 2015518 - T 100 -13.2 -4.7254 | opp_overlap 2015518 ACTTGTCATCAAAAA GGGATAGC TTA GCTATCCC TTTTTGATTTTTAAT TERM 2330 2015518 - 2015536 + T 100 -13.2 -5.1971 | opp_overlap 2015518 ACTTGTCATCAAAAA GGGATAGC TTA GCTATCCC TTTTTGATTTTTAAT Spea_1663 2016486 - 2015581 - | hypothetical protein Spea_1664 2016919 - 2016548 - | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase TERM 2331 2017031 - 2017052 + G 73 -10.1 -3.40173 | opp_overlap 2017030, overlap 2017029 2017050 GATTTGAGAGTCAAG GCGTAGCCT TTAA AGGCTTCGC TATTTCAGCGTTTAT TERM 2332 2017050 - 2017062 + G 72 -4.8 -4.61648 | opp_overlap 2017030, overlap 2017031 2017029 AGCCTTTAAAGGCTT CGCT ATTTC AGCG TTTATTGTTGTTATT Spea_1665 2017009 - 2018157 + | hypothetical protein Spea_1666 2018179 - 2019090 + | hypothetical protein TERM 2333 2019114 - 2019134 + T 100 -14.1 -5.3236 | overlap 2019132 AGTGAGTTTCTTGAA GGCCAAACA TGA TGTTTGGCC TTTTTTATGGCTTAT TERM 2334 2019559 - 2019572 + T 73 -6.7 -4.30844 | opp_overlap 2019559 2019558 GAAAATCGCTTAAAG CCAGT AGAT ACTGG TTTTAATACTAAAAT TERM 2335 2019607 - 2019587 - T 90 -9.8 -4.4261 | opp_overlap 2019587 GTTTTAATACTAAAA TAGCAACC ACTTG GGTTGCTA TTTTTTGTTAGGGGC TERM 2336 2019587 - 2019607 + T 100 -9.8 -5.4505 | opp_overlap 2019587 GTTTTAATACTAAAA TAGCAACC ACTTG GGTTGCTA TTTTTTGTTAGGGGC Spea_1667 2020121 - 2019657 - | hypothetical protein TERM 2337 2020726 - 2020697 - R 83 -12.3 -2.87931 | opp_overlap 2020704, overlap 2020704 CGTAGTCGTCAGATA CAAAAAAGCCTGC GTCA GCAGGCTTTTTTT CAAGGATTAAAACAA TERM 2338 2020704 - 2020719 + r 100 -10.4 -5.41746 | opp_overlap 2020697 2020704 GTCAGATACAAAAAA GCCTGC GTCA GCAGGC TTTTTTTCAAGGATT TERM 2339 2020719 - 2020704 - R 100 -10.4 -5.4251 | opp_overlap 2020704, overlap 2020697 GTCAGATACAAAAAA GCCTGC GTCA GCAGGC TTTTTTTCAAGGATT Spea_1668 2022898 - 2020751 - | phosphate acetyltransferase TERM 2340 2022512 - 2022499 - G 81 -5.3 -5.1356 | opp_overlap 2022507 GTGTAGCAACAAAAA TGATG TCTG CATCA AGTGCTTTAGCGATT TERM 2341 2022825 - 2022794 - G 74 -5.8 -4.57073 | GATTGGCTTGAAAAA GCGTACTTTAACGC CATG GCGCTCAAGTGCAC GAACCATACCTAGGC TERM 2342 2022961 - 2022987 + r 100 -16.8 -4.74539 | CTTTACTGCGCTAAC TGCAGCTAATAC TGA GTATTAGCTGCA TTTTCTTGCATTATT Spea_1669 2024197 - 2023001 - | acetate kinase TERM 2343 2024651 - 2024670 + G 76 -9.2 -3.72485 | overlap 2024645 GGCTTACTCTGGTTA GGTTGGCG TTCT CGCCACCC TTTACCGTTATCTTT Spea_1670 2024393 - 2024836 + | hypothetical protein TERM 2344 2024857 - 2024874 + T 85 -11.3 -3.36785 | opp_overlap 2024852 TGTTCTAATATTTTA CGCGGTT AATA AACCGCG TTCATTCCCATATCG Spea_1671 2025602 - 2024862 - | pyruvate formate lyase-activating enzyme 1 TERM 2345 2024993 - 2025024 + g 74 -3.7 -4.93547 | TATGCTTGCCTAGCT CGTGGTAAGGG AGTAACTCGA CCTTTTCCACG TTTTTCATTGGTTGA TERM 2346 2025447 - 2025409 - G 72 -4.8 -4.63218 | gap 1, opp_overlap 2025410, overlap 2025410 CTGGCTTCAAGAAAA GGTCGATAAC-TAATGA TTTGAC TCATTAAGTCATCGACT TTCATTTCTTTACCA TERM 2347 2025410 - 2025446 + g 72 -6.1 -4.27211 | gap 1, opp_overlap 2025410 2025409 TGGCTTCAAGAAAAG GTCGATAAC-TAATGA TTTGAC TCATTAAGTCATCGAC TTTCATTTCTTTACC Spea_1672 2027949 - 2025667 - | formate acetyltransferase TERM 2348 2028176 - 2028164 - R 71 -6.3 -4.19238 | GGCTGAAGGCTAAAA TTGGT AAG ACCAA TTAACCATGAGTATA TERM 2349 2028466 - 2028500 + r 100 -16.6 -4.37092 | opp_overlap 2028472 CATTGATGATAGTGT TAGGAAGCGAGAAGAG TCA CTCTTCTCGCTATCTA TTTTATAAAAGAGCT TERM 2350 2028494 - 2028472 - R 100 -16.4 -3.16191 | opp_overlap 2028466 TGATAGTGTTAGGAA GCGAGAAGAG TCA CTCTTCTCGC TATCTATTTTATAAA Spea_1673 2030035 - 2028503 - | hypothetical protein TERM 2351 2030190 - 2030180 - H 84 -6.8 -4.88388 | opp_overlap 2030179 2030180 ACAATGTGACAAAAA CAGG AAA CCTG ATTTTGTCGGCTATA TERM 2352 2031462 - 2031441 - g 76 -5.1 -4.77157 | overlap 2031430 2031443 2031446 2031455 TCAATGCACTAAAAA TAGCACAGC ATAA GCTGCACCA TAGCTGGGGGCAGGC TERM 2353 2031775 - 2031788 + G 73 -2.3 -5.13741 | GACCTTAGGAAATAT CGTCG GTGG TGGCG TTTTTGTTGGCTTAG Spea_1674 2030945 - 2032426 + | formate/nitrite transporter TERM 2354 2032476 - 2032445 - T 100 -14.6 -3.92746 | opp_overlap 2032450, overlap 2032450 TTTAGGCTAAAAAGA TAAAACGGGACGAT GATT ATCGTCCCGTTTTT TTTACTTCTTTATCT TERM 2355 2032450 - 2032471 + T 100 -14.5 -6.00814 | opp_overlap 2032450 2032445 GCTAAAAAGATAAAA CGGGACGAT GATT ATCGTCCCG TTTTTTTTACTTCTT TERM 2356 2032471 - 2032450 - T 100 -14.5 -4.98672 | opp_overlap 2032450, overlap 2032445 GCTAAAAAGATAAAA CGGGACGAT GATT ATCGTCCCG TTTTTTTTACTTCTT Spea_1675 2033383 - 2032478 - | LysR family transcriptional regulator Spea_1676 2033805 - 2034002 + | hypothetical protein Spea_1677 2033989 - 2035428 + | sodium/panthothenate symporter TERM 2357 2035441 - 2035468 + F 74 -6.2 -4.32857 | gap 1, opp_overlap 2035435, overlap 2035444 2035467 TAAAATTGATGGCAG CC-TTGGCTAGCC AAG GGCCAGCCATTGG TTTATATTTGCCGCC TERM 2358 2035444 - 2035464 + F 83 -11.1 -3.72621 | opp_overlap 2035435, overlap 2035441 AATTGATGGCAGCCT TGGCTAGCC AAG GGCCAGCCA TTGGTTTATATTTGC TERM 2359 2035878 - 2035932 + G 79 -9.5 -3.67402 | gap 1, overlap 2035876 2035879 TCATCATGTTTATGC TCGTTATTGGTGGTGCCT-TTGGCAT AGTG ATGGCAACGGGCACCATAGATAACGG TATTTTAAAGCTTAT TERM 2360 2035879 - 2035931 + G 72 -10.8 -2.79718 | gap 1, overlap 2035878 2035876 CATCATGTTTATGCT CGTTATTGGTGGTGCCT-TTGGCAT AGTG ATGGCAACGGGCACCATAGATAACG GTATTTTAAAGCTTA Spea_1678 2035508 - 2037052 + | hypothetical protein TERM 2361 2037133 - 2037162 + T 90 -12.3 -3.47227 | opp_overlap 2037139, overlap 2037139 CAGTGTTTAAATCAT AAAAAACGGCATC CTTG GATGCCGTTTTTA TTCTCATAATTGAAG TERM 2362 2037139 - 2037156 + T 100 -11.3 -5.22006 | opp_overlap 2037139, overlap 2037133 TTAAATCATAAAAAA CGGCATC CTTG GATGCCG TTTTTATTCTCATAA TERM 2363 2037156 - 2037139 - T 100 -11.3 -5.42265 | opp_overlap 2037139 2037133 TTAAATCATAAAAAA CGGCATC CTTG GATGCCG TTTTTATTCTCATAA Spea_1679 2038207 - 2037215 - | C4-dicarboxylate transporter/malic acid transport protein Spea_1680 2039456 - 2038383 - | O-methyltransferase, putative Spea_1681 2039629 - 2040306 + | TetR family transcriptional regulator TERM 2364 2040314 - 2040297 - T 100 -11.3 -5.46657 | opp_overlap 2040297 GATGGCAATAAAAAA CCCAAGC TAAG GCTTGGG TTTTTTATTAAACAT TERM 2365 2040297 - 2040314 + T 100 -11.3 -5.45652 | opp_overlap 2040297 GATGGCAATAAAAAA CCCAAGC TAAG GCTTGGG TTTTTTATTAAACAT Spea_1682 2041306 - 2040338 - | cysteine synthase A Spea_1683 2041544 - 2042818 + | RDD domain-containing protein Spea_1684 2043017 - 2044219 + | response regulator receiver modulated diguanylate cyclase TERM 2366 2044290 - 2044319 + T 91 -13.7 -2.57344 | opp_overlap 2044290 2044297, overlap 2044297 GTGCTAGATAAAGAA GATAAAAGCAGCC AAAT GGCTGCTTTTTTC ATTATGACGGAACTC TERM 2367 2044319 - 2044290 - T 100 -13.7 -4.14627 | opp_overlap 2044290 2044297, overlap 2044297 GTGCTAGATAAAGAA GATAAAAGCAGCC AAAT GGCTGCTTTTTTC ATTATGACGGAACTC TERM 2368 2044312 - 2044297 - T 93 -10.4 -4.86029 | opp_overlap 2044297 2044290, overlap 2044290 ATAAAGAAGATAAAA GCAGCC AAAT GGCTGC TTTTTTCATTATGAC TERM 2369 2044297 - 2044312 + T 100 -10.4 -5.32944 | opp_overlap 2044290 2044297, overlap 2044290 ATAAAGAAGATAAAA GCAGCC AAAT GGCTGC TTTTTTCATTATGAC Spea_1685 2046680 - 2044344 - | hypothetical protein TERM 2370 2044404 - 2044421 + g 79 -7.7 -4.4009 | opp_overlap 2044404 AGTCTTCATCAATGA GTCGATG GCGT CATCGGC TTTTATACCATCGGA TERM 2371 2046839 - 2046856 + r 79 -9.9 -3.62723 | opp_overlap 2046839, overlap 2046835 TTCAGATACAAAAAA GCCATGT CGAG ACATGGC TTGGTTATTTAAATG TERM 2372 2046856 - 2046839 - R 100 -9.9 -5.4251 | opp_overlap 2046839 2046835 TTCAGATACAAAAAA GCCATGT CGAG ACATGGC TTGGTTATTTAAATG TERM 2373 2046904 - 2046933 + r 77 -8.7 -3.85817 | gap 1 GCGTTATTCAGGCGC TATCGCATCGTTCT TAT AGG-CGGTGCGATA TTTATCAACCCACAT Spea_1686 2047665 - 2046892 - | putative sulfate transport protein CysZ TERM 2374 2047223 - 2047210 - G 71 -3.8 -4.81734 | AAACAGCAGTAAAAA CACG ATGGCG CGTG GCAGATAGTATTTAA TERM 2375 2048499 - 2048489 - g 72 -8.2 -3.6579 | AAGTTAGCCGAACAA GCCG AAA CGGC CAAAAAATACCGCGA TERM 2376 2050468 - 2050454 - g 76 -5 -4.82661 | overlap 2050456 2050457 ACGAATAAAAAACAA CAGCTT GCG AAGCTA GAAGACTTGACTCAA Spea_1687 2047856 - 2051278 + | chromosome segregation protein SMC Spea_1688 2051302 - 2052279 + | cell division protein ZipA TERM 2377 2052334 - 2052319 - f 89 -11.8 -3.67954 | opp_overlap 2052319 TAAACAGATTTGAAA GGCCGC AGCA GCGGCC TTTGTTATTATTCGG TERM 2378 2052319 - 2052334 + F 95 -11.8 -4.57882 | opp_overlap 2052319 TAAACAGATTTGAAA GGCCGC AGCA GCGGCC TTTGTTATTATTCGG Spea_1689 2052358 - 2054364 + | DNA ligase, NAD-dependent TERM 2379 2054407 - 2054378 - f 83 -10.9 -3.73072 | opp_overlap 2054386, overlap 2054379 2054386 AACTGCTCGACTAAA TTAAAAAAGCTCC TTAG GGAGCTTTTTTAG TGAATGCTTGAAAAT TERM 2380 2054406 - 2054379 - f 93 -14.4 -2.83522 | opp_overlap 2054386, overlap 2054378 2054386 ACTGCTCGACTAAAT TAAAAAAGCTCC TTAG GGAGCTTTTTTA GTGAATGCTTGAAAA TERM 2381 2054399 - 2054386 - f 93 -8.1 -5.40004 | opp_overlap 2054386, overlap 2054379 2054378 GACTAAATTAAAAAA GCTCC TTAG GGAGC TTTTTTAGTGAATGC TERM 2382 2054386 - 2054399 + F 88 -8.1 -5.1675 | opp_overlap 2054386 2054379 2054378 GACTAAATTAAAAAA GCTCC TTAG GGAGC TTTTTTAGTGAATGC Spea_1690 2054495 - 2054971 + | hypothetical protein TERM 2383 2055000 - 2054983 - f 100 -11.3 -5.87688 | ATAAGCTAAAAAAAA GACGCTG CAAG CAGCGTC AAAAGAACCTTTAAT TERM 2384 2055692 - 2055706 + G 70 -2.1 -4.94962 | TATTGAGTTAATTAA GACAT TAGAT GTGTC TTTTGTTTACCTTAT Spea_1691 2055549 - 2056745 + | metal dependent phosphohydrolase Spea_1692 2056862 - 2057746 + | NAD-dependent epimerase/dehydratase Spea_1693 2057801 - 2058433 + | DSBA oxidoreductase TERM 2385 2058561 - 2058544 - f 72 -8.4 -3.54146 | opp_overlap 2058544 2058558, overlap 2058542 TGTTCCAATTAAACA GCCCAC TTAAAT GTGGGC TTTTTGTTTTCAGCC TERM 2386 2058544 - 2058561 + F 95 -8.4 -5.45802 | opp_overlap 2058544 2058542, overlap 2058558 TGTTCCAATTAAACA GCCCAC TTAAAT GTGGGC TTTTTGTTTTCAGCC Spea_1694 2058689 - 2059627 + | protein serine/threonine phosphatase TERM 2387 2059656 - 2059646 - f 71 -6.8 -4.02132 | opp_overlap 2059644 2059646 2059655 TCGGAAATCCATAAA GCCT AAT AGGC TATTTATAAATGGCT TERM 2388 2059833 - 2059845 + F 71 -4.1 -4.88918 | CTTTTTCTATTACTA CCTTG GTC TAAGG TTTTGTTTGAAATAC Spea_1695 2060031 - 2060297 + | hypothetical protein Spea_1696 2060337 - 2062055 + | Na+/solute symporter TERM 2389 2062099 - 2062084 - f 95 -11.8 -4.31085 | opp_overlap 2062084 CATAGCAATGTAAAA GGGCGC TTCG GCGCCC TTTTTGTTTTCAGTC TERM 2390 2062084 - 2062099 + F 100 -11.8 -5.48213 | opp_overlap 2062084 CATAGCAATGTAAAA GGGCGC TTCG GCGCCC TTTTTGTTTTCAGTC TERM 2391 2062119 - 2062140 + F 77 -8.7 -3.794 | opp_overlap 2062120, overlap 2062120 TGTTTTCAGTCCTAA ACCACCTAC TTCA GTAGGTGGA TTTCATCAATTAGGC TERM 2392 2062120 - 2062139 + F 81 -12.2 -2.87319 | opp_overlap 2062120, overlap 2062119 GTTTTCAGTCCTAAA CCACCTAC TTCA GTAGGTGG ATTTCATCAATTAGG TERM 2393 2062139 - 2062120 - f 89 -12.2 -3.57144 | opp_overlap 2062120 2062119 GTTTTCAGTCCTAAA CCACCTAC TTCA GTAGGTGG ATTTCATCAATTAGG TERM 2394 2062443 - 2062429 - f 73 -10 -2.84602 | opp_overlap 2062429 2062424, overlap 2062428 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTGCTTTATAACAG TERM 2395 2062429 - 2062443 + F 75 -10 -3.05997 | opp_overlap 2062428 2062429, overlap 2062424 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTGCTTTATAACAG TERM 2396 2062466 - 2062491 + F 82 -6.1 -4.88217 | opp_overlap 2062458 2062468 2062469, overlap 2062461 2062468 2062469 TATAACAGATGGGCA AAGCCACCTTC TTCA GAAGGTGGATC TTTTACTTTTTTACT TERM 2397 2062468 - 2062489 + F 79 -8.7 -4.03001 | opp_overlap 2062458 2062468 2062469, overlap 2062461 2062466 2062469 TAACAGATGGGCAAA GCCACCTTC TTCA GAAGGTGGA TCTTTTACTTTTTTA TERM 2398 2062489 - 2062468 - f 72 -8.7 -3.60948 | opp_overlap 2062461 2062466 2062468 2062469, overlap 2062458 2062469 TAACAGATGGGCAAA GCCACCTTC TTCA GAAGGTGGA TCTTTTACTTTTTTA TERM 2399 2062469 - 2062488 + F 82 -12.2 -2.9936 | opp_overlap 2062458 2062469 2062468, overlap 2062461 2062468 2062466 AACAGATGGGCAAAG CCACCTTC TTCA GAAGGTGG ATCTTTTACTTTTTT TERM 2400 2062488 - 2062469 - f 81 -12.2 -2.76087 | opp_overlap 2062461 2062468 2062466 2062469, overlap 2062458 2062468 AACAGATGGGCAAAG CCACCTTC TTCA GAAGGTGG ATCTTTTACTTTTTT Spea_1697 2062596 - 2064443 + | CBS domain-containing protein Spea_1698 2064506 - 2065192 + | exonuclease RNase T and DNA polymerase III Spea_1699 2065361 - 2065942 + | hypothetical protein TERM 2401 2066006 - 2065989 - T 100 -7 -5.61596 | opp_overlap 2065989, overlap 2065975 ACGCCCATAAAAAAA CACCGA TATGAC TCGGTG TTTTTTTATTAATGC TERM 2402 2065989 - 2066006 + T 100 -7 -5.84381 | opp_overlap 2065975 2065989 ACGCCCATAAAAAAA CACCGA TATGAC TCGGTG TTTTTTTATTAATGC Spea_1700 2067102 - 2066038 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2403 2066125 - 2066145 + g 79 -9.7 -3.76224 | opp_overlap 2066125 2066124 ATCGCTAGTATTAAT TGGTGTGAC TCT GTCACCCCA TTTAATCAATGCCGC TERM 2404 2066781 - 2066767 - G 78 -4.9 -4.9792 | opp_overlap 2066767 TAGGCCATATAAAAA GCCAC TACAG GCGGC GTTGATATCAAAAGC TERM 2405 2067147 - 2067128 - R 93 -10 -4.90266 | opp_overlap 2067128 TCTATCAATTAAAAA GGCAGAAC CTGA GCTCTGCC TTATGGGATCTGTAT Spea_1701 2067874 - 2067203 - | GntR family transcriptional regulator TERM 2406 2067940 - 2067970 + r 95 -15.6 -2.78015 | opp_overlap 2067941 2067946, overlap 2067946 GCTAATGCCATTATA ATGAAAGGGAAACC ATA GGTTTCCCTTTCAC ATTTGACATACTTAA TERM 2407 2067969 - 2067941 - R 100 -19.1 -3.42574 | opp_overlap 2067940 2067946, overlap 2067946 CTAATGCCATTATAA TGAAAGGGAAACC ATA GGTTTCCCTTTCA CATTTGACATACTTA TERM 2408 2067946 - 2067964 + r 95 -13.2 -3.71917 | opp_overlap 2067946 2067941, overlap 2067940 GCCATTATAATGAAA GGGAAACC ATA GGTTTCCC TTTCACATTTGACAT TERM 2409 2067964 - 2067946 - R 100 -13.2 -4.02108 | opp_overlap 2067940 2067946, overlap 2067941 GCCATTATAATGAAA GGGAAACC ATA GGTTTCCC TTTCACATTTGACAT Spea_1702 2069547 - 2067982 - | aldehyde dehydrogenase Spea_1703 2070592 - 2069591 - | proline racemase TERM 2410 2070675 - 2070626 - R 77 -8.7 -3.92075 | opp_overlap 2070635, overlap 2070635 ATCGTTATTGATAAA GTGATCAAAGCCAGTCGTTTAAT TTGC ATTAAACGGCTGGCTTTATAAAC ATCAAACTTTAATTA TERM 2411 2070666 - 2070635 - R 100 -14.6 -3.83169 | opp_overlap 2070635, overlap 2070626 GATAAAGTGATCAAA GCCAGTCGTTTAAT TTGC ATTAAACGGCTGGC TTTATAAACATCAAA TERM 2412 2070635 - 2070666 + r 100 -16.8 -3.87815 | opp_overlap 2070626 2070635 GATAAAGTGATCAAA GCCAGTCGTTTAAT TTGC ATTAAACGGCTGGC TTTATAAACATCAAA Spea_1704 2070954 - 2070754 - | dihydrodipicolinate synthase Spea_1705 2071143 - 2072183 + | proline racemase Spea_1706 2072218 - 2073480 + | FAD dependent oxidoreductase TERM 2413 2073600 - 2073610 + T 74 -4 -5.01732 | ATTTCTAATCGATGT TTAG TAG CTAA TTTTTTGCACCAATT Spea_1707 2074826 - 2073600 - | amine oxidase TERM 2414 2073972 - 2073987 + g 85 -6.8 -5.06414 | overlap 2073965 AGGGTCATTGTGGAG CACGGT TTTG GCCGTG TTTTTCTTCCAGGGA Spea_1708 2076399 - 2074870 - | hypothetical protein Spea_1709 2076622 - 2076846 + | hypothetical protein Spea_1710 2078213 - 2076957 - | amino acid permease-associated region TERM 2415 2077016 - 2077001 - G 73 -2.5 -5.1523 | CGGATAATAGAAAAA GGCAC AACAAA GTACC AGTAATAGGCCAGCC Spea_1711 2079704 - 2078400 - | peptidase M24 Spea_1712 2079870 - 2080424 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 2416 2080480 - 2080499 + T 89 -10 -4.15703 | opp_overlap 2080478 GACTTCGAATGTATA CGCCTCTA GCTC TAGGGGCG TTATTGTTTCTAGCC TERM 2417 2083040 - 2083025 - T 77 -6.2 -4.60041 | opp_overlap 2083025 2083023, overlap 2083035 ATTGAGTTCTAAAAA CACTTA ACAT TAAGTG TCTTAGCTCGTTATT TERM 2418 2083676 - 2083664 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 2419 2084474 - 2084458 - T 86 -9.4 -4.08546 | overlap 2084471 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 2420 2084980 - 2084969 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 2421 2086345 - 2086379 + T 95 -15.2 -2.80589 | opp_overlap 2086353, overlap 2086353 CAGGCGCTAAATTAA GTAGAGAAGCCACCTT GTT AAGGTGGCTTTTTTGC GTTTGGAGCTTTTTA TERM 2422 2086371 - 2086353 - T 95 -13.2 -3.63078 | opp_overlap 2086353 2086345 AAATTAAGTAGAGAA GCCACCTT GTT AAGGTGGC TTTTTTGCGTTTGGA TERM 2423 2086353 - 2086371 + T 100 -13.2 -5.22039 | opp_overlap 2086353, overlap 2086345 AAATTAAGTAGAGAA GCCACCTT GTT AAGGTGGC TTTTTTGCGTTTGGA TERM 2424 2086471 - 2086454 - T 72 -9.9 -3.07816 | GGCTCATCCACTTAA GTAGGCA TAAA TGCCTAC TCCCGACGTCATCCC Spea_1714 2086914 - 2086795 - | transposase and inactivated derivative Spea_1715 2087495 - 2086995 - | hypothetical protein TERM 2425 2087212 - 2087226 + g 70 -2.1 -5.03314 | overlap 2087214 GGAGTGTTAAGGATC GTTTC CAACT GGAAC TTTTTTAAAAGTCGC Spea_1716 2088572 - 2087694 - | hypothetical protein TERM 2426 2088446 - 2088431 - G 75 -2.6 -5.25735 | gap 1 GCAAAAAAGTAAAAA GT-ATCG CCG CGATGAC ATATCTAAGCCAGGT TERM 2427 2088594 - 2088609 + r 83 -11.8 -3.20991 | opp_overlap 2088594 ACCTTCAATAAAAAA GGGCGG AATT CCGCCC TTAACTTACATTAGC TERM 2428 2088609 - 2088594 - R 100 -11.8 -5.45652 | opp_overlap 2088594 ACCTTCAATAAAAAA GGGCGG AATT CCGCCC TTAACTTACATTAGC Spea_1717 2089894 - 2088632 - | nucleoside transporter Spea_1718 2090739 - 2089906 - | purine nucleoside phosphorylase TERM 2429 2091091 - 2091079 - g 74 -10.5 -3.20361 | AAAACCTTAACTCAA GCCGC GCA GCGGC TACACATATCAAAGT TERM 2430 2091630 - 2091618 - g 71 -3.3 -4.88736 | TATGAGTCAGAAAAA CTCAG CAT CTGCG CAATTAGTGGTTAAT Spea_1719 2090944 - 2091921 + | LysR family transcriptional regulator TERM 2431 2091961 - 2091941 - T 100 -8.3 -5.5353 | opp_overlap 2091941 GAGACTAATAAAAAA GCCCACT TTCATGT AGTGGGC TTAAGTTCATATTGA Spea_1720 2092657 - 2091983 - | hypothetical protein Spea_1721 2092785 - 2093189 + | hypothetical protein Spea_1722 2093300 - 2094247 + | magnesium and cobalt transport protein CorA TERM 2432 2094293 - 2094278 - T 93 -10.4 -5.15634 | opp_overlap 2094278 CATTGGATTAAAAAA GCTCGC GACT GCGAGC TTTTTGCTATTACAG TERM 2433 2094278 - 2094293 + T 93 -10.4 -4.87626 | opp_overlap 2094278 CATTGGATTAAAAAA GCTCGC GACT GCGAGC TTTTTGCTATTACAG Spea_1723 2094654 - 2094322 - | hypothetical protein Spea_1724 2095989 - 2094730 - | metal dependent phosphohydrolase Spea_1725 2097128 - 2096355 - | hypothetical protein Spea_1726 2099323 - 2097272 - | beta-lactamase domain-containing protein TERM 2434 2099122 - 2099134 + g 72 -5.5 -4.43208 | CTGAAAATGGTAAGC GCTCT GCA AGGGC TTTGTTTGCAGCTAT Spea_1727 2099532 - 2100446 + | LysR family transcriptional regulator TERM 2435 2100561 - 2100518 - T 86 -12.1 -3.38294 | opp_overlap 2100524, overlap 2100516 CTTCATAGAAATATA CTAAGAGCTATTTTTTAGT GATGTA ATCAAAAAATAGCTCTTAG CCGCTTATTTACTCG Spea_1728 2101758 - 2100616 - | membrane protein involved in aromatic hydrocarbon degradation TERM 2436 2101817 - 2101784 - R 79 -8.9 -3.8374 | opp_overlap 2101782 2101780 2101785 2101786, overlap 2101785 CCAAAAAAGGGGAAA GTTCAGCAGAGCATA GGGT CATGCTCTGCTGATA TGTGTTGATTAGCAG TERM 2437 2101785 - 2101817 + r 75 -10.1 -3.18366 | gap 1, opp_overlap 2101785 2101784, overlap 2101782 2101780 2101786 CAAAAAAGGGGAAAG T-TCAGCAGAGCAT AGGGTC ATGCTCTGCTGATA TGTGTTGATTAGCAG TERM 2438 2101816 - 2101785 - R 83 -12.4 -2.8916 | opp_overlap 2101782 2101780 2101785 2101786, overlap 2101784 CAAAAAAGGGGAAAG TTCAGCAGAGCATA GGGT CATGCTCTGCTGAT ATGTGTTGATTAGCA TERM 2439 2101786 - 2101815 + r 100 -15.2 -3.15147 | opp_overlap 2101785 2101784, overlap 2101785 2101782 2101780 AAAAAAGGGGAAAGT TCAGCAGAGCAT AGGGTC ATGCTCTGCTGA TATGTGTTGATTAGC Spea_1729 2104951 - 2101826 - | acriflavin resistance protein Spea_1730 2106057 - 2104951 - | RND family efflux transporter MFP subunit Spea_1731 2106915 - 2106115 - | hypothetical protein TERM 2440 2107084 - 2107071 - R 71 -6.7 -4.06419 | TTCCCCCACAAACAA CCTAC TTCA GTAGG GGCCGTTATCATCAA TERM 2441 2107222 - 2107201 - R 75 -10.2 -2.98493 | opp_overlap 2107201 2107205, overlap 2107198 TGGATTACGAAACCA CGAAGGTC GTTAAT GACCTTCG TTATCAGTTGTCGAT TERM 2442 2107201 - 2107222 + r 82 -10.9 -3.45321 | opp_overlap 2107201 2107198, overlap 2107205 TGGATTACGAAACCA CGAAGGTCG TTAA TGACCTTCG TTATCAGTTGTCGAT Spea_1732 2108423 - 2107242 - | radical SAM domain-containing protein Spea_1733 2109134 - 2108502 - | two component LuxR family transcriptional regulator Spea_1734 2110434 - 2109241 - | histidine kinase TERM 2443 2110325 - 2110300 - G 70 -10.5 -2.55351 | opp_overlap 2110298 2110302, overlap 2110299 2110302 TCTGTCGACACCAAG CAGTTCTCTAC ACTC GTCGAGAACTG AATTCATCACCTCCG TERM 2444 2110847 - 2110860 + G 74 -3.8 -5.02074 | overlap 2110845 CAGCCTAGCTCAACC GCAG GGCGTG CTGC TTTTTTAACGGGTCA Spea_1735 2110589 - 2112115 + | sulfatase TERM 2445 2112129 - 2112149 + F 93 -14 -3.08996 | overlap 2112131 AGACCTCTCTTACCT GAGGGCGC ATTAG GCGCCCTC TGTTCCCTGCAAATA TERM 2446 2112131 - 2112147 + F 79 -10.8 -3.10344 | overlap 2112129 ACCTCTCTTACCTGA GGGCGC ATTAG GCGCCC TCTGTTCCCTGCAAA Spea_1736 2112217 - 2113179 + | ATPase Spea_1737 2113197 - 2114117 + | hypothetical protein TERM 2447 2114231 - 2114245 + G 75 -2.8 -5.1485 | GGTGGCCTAACACGC CAGCGT GGA ATGTTG TTTTTATCTTGCTTA Spea_1738 2114149 - 2114604 + | hypothetical protein Spea_1739 2114598 - 2115584 + | von Willebrand factor type A Spea_1740 2115577 - 2117271 + | hypothetical protein Spea_1741 2117271 - 2118509 + | hypothetical protein TERM 2448 2118958 - 2118937 - g 73 -10.3 -3.01791 | opp_overlap 2118932 ATGGGGTCGCCAATA TGATCATCA AAGA TGATGATCA GCCTGTCGATTCGGC Spea_1742 2118642 - 2119049 + | hypothetical protein TERM 2449 2119103 - 2119087 - g 72 -8.7 -3.75629 | overlap 2119102 CATCCCCAACTGAAA CGCTCTG TAG CAAAGCG GCTAACACTCGCCGT Spea_1743 2119054 - 2120787 + | type I phosphodiesterase/nucleotide pyrophosphatase TERM 2450 2121233 - 2121207 - f 77 -9.4 -3.5944 | overlap 2121210 AGTGAGAGCCTTAAA CTATGTCGGCGC TTG ACGCCAACATTG AGAACAACAGACAAG TERM 2451 2121230 - 2121210 - f 72 -9.7 -2.92171 | overlap 2121207 GAGAGCCTTAAACTA TGTCGGCGC TTG ACGCCAACA TTGAGAACAACAGAC TERM 2452 2121994 - 2121959 - g 76 -12 -2.52676 | opp_overlap 2121958 2121955, overlap 2121966 CATCGGGGCAATGTA CCAACAAGTGGCAACA AGTA TATTGCCACCTCTTGG ATCATGTTTAATCGC TERM 2453 2121987 - 2121966 - g 79 -9.5 -3.75105 | opp_overlap 2121958 2121955, overlap 2121959 GCAATGTACCAACAA GTGGCAACA AGTA TATTGCCAC CTCTTGGATCATGTT Spea_1744 2121344 - 2122039 + | 2OG-Fe(II) oxygenase Spea_1745 2123479 - 2122127 - | histidine kinase Spea_1746 2124144 - 2123470 - | two component transcriptional regulator Spea_1747 2124429 - 2125283 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 2454 2125468 - 2125439 - g 73 -10.1 -3.37796 | opp_overlap 2125438 2125437 2125464, overlap 2125465 CGTCAGTATCGATAA GCTGTCTTTTCAC CATG GTGAAAAAACGGC CATTATTGGTCGCTC TERM 2455 2125480 - 2125465 - g 76 -4.6 -5.03715 | opp_overlap 2125438 2125437 2125464, overlap 2125439 ACCATGGTGAAAAAA CGGCCA TTAT TGGTCG CTCTGGTTGCGGTAA Spea_1748 2125305 - 2126135 + | ABC transporter related Spea_1749 2126158 - 2127687 + | binding-protein-dependent transport systems inner membrane component TERM 2456 2127680 - 2127665 - T 79 -5.4 -4.90471 | gap 1, overlap 2127667 ATTCAAAAGACAAAA GC-CAGC TAG GCTGCGC ACATTAGTCACGTCA Spea_1750 2128119 - 2127775 - | hypothetical protein TERM 2457 2129296 - 2129286 - g 77 -6.8 -4.48877 | overlap 2129288 TAAAGATGGACAAAA GCTG TCT CAGC TCAGCCAAGACTTCA Spea_1751 2129017 - 2129367 + | phasin family protein Spea_1752 2129463 - 2131217 + | poly(R)-hydroxyalkanoic acid synthase, class I Spea_1753 2131207 - 2131608 + | dehydratase TERM 2458 2131743 - 2131791 + T 70 -9.2 -3.21622 | gap 1, opp_overlap 2131727 2131742 TAGCGAGCAATAAGT CGCCAAAATTTTTGAAA-GAGCA GGAT TGCTGATTTTACAAATTTTGGCG TTGCTCGCTCTCTAT TERM 2459 2131894 - 2131908 + T 87 -5 -5.47159 | opp_overlap 2131885 GAAGAACTCAAACTA CTCAAG CCG TTTGAG TTTTTTATCTTCACC Spea_1754 2132845 - 2132078 - | hypothetical protein TERM 2460 2132431 - 2132441 + g 74 -5.4 -4.7261 | overlap 2132422 TTAACTGCTGATGCA GCTT CTC AAGC TTTATTTTAATGGCT TERM 2461 2133289 - 2133305 + G 72 -9.4 -3.52113 | overlap 2133287 TGCGTTAATCCTATT GCTGGC GATGA GCCAGC TATTTGTGGCGCAGT TERM 2462 2134657 - 2134644 - g 72 -3.1 -5.04175 | CTAAGCAGATAAAAA TCGAG TTGA CTCAA GATGTGAATGCCAAG Spea_1755 2133239 - 2134972 + | histidine kinase Spea_1756 2134969 - 2136321 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 2463 2136323 - 2136364 + T 79 -11 -3.21595 | overlap 2136335 ATCAACTAGTGTAAC CTTTAGGTATGAGCCGCT TATCAT AGCGGCTTGTACTAAAAG TTAGTGCTAAAGGTT TERM 2464 2136335 - 2136352 + T 70 -8.4 -3.41527 | overlap 2136323 AACCTTTAGGTATGA GCCGCT TATCAT AGCGGC TTGTACTAAAAGTTA Spea_1757 2137022 - 2136378 - | lysine exporter protein LysE/YggA Spea_1758 2137233 - 2138063 + | NAD synthetase TERM 2465 2138101 - 2138086 - T 74 -6 -4.31433 | opp_overlap 2138087, overlap 2138087 TACTTCTACAATAAA TGGCGC TTCG GCGCCT TTTTCATTTTCAGCC TERM 2466 2138100 - 2138087 - T 73 -9.5 -3.18378 | opp_overlap 2138087, overlap 2138086 ACTTCTACAATAAAT GGCGC TTCG GCGCC TTTTTCATTTTCAGC TERM 2467 2138087 - 2138100 + T 93 -9.5 -5.0925 | opp_overlap 2138087 2138086 ACTTCTACAATAAAT GGCGC TTCG GCGCC TTTTTCATTTTCAGC Spea_1759 2138659 - 2138180 - | hypothetical protein TERM 2468 2139042 - 2139086 + G 70 -9.4 -3.35679 | gap 1 CCGTTATGTGCATGG CAGCTATTCTGATCCTG-GTC ATTG GACACAGGATTGGAATCGCAG TTATGAATGGCCAAC Spea_1760 2138746 - 2140185 + | lysophospholipase-like protein Spea_1761 2142472 - 2140310 - | diguanylate cyclase TERM 2469 2140481 - 2140501 + g 82 -2.6 -5.61596 | overlap 2140482 CTTATCCTGCTGACT TTCGATGA CAATA TTATCGAG TTTTTTTCTAAAGCT Spea_1762 2142913 - 2143137 + | hypothetical protein TERM 2470 2143174 - 2143158 - T 90 -9.4 -4.4261 | opp_overlap 2143158 CTGGCAAGATTAAAA GCGCTG CATGT CAGCGC TTTTTTTATTTATAA TERM 2471 2143158 - 2143174 + T 100 -9.4 -6.02919 | opp_overlap 2143158 CTGGCAAGATTAAAA GCGCTG CATGT CAGCGC TTTTTTTATTTATAA TERM 2472 2143232 - 2143267 + T 100 -16.4 -4.49556 | opp_overlap 2143241, overlap 2143241 TATAAATCGTGCAGT AACAAAAAAGCCAGCT TATT AGCTGGCTTTTTTGTA TTTATTTGGTCGGGA TERM 2473 2143258 - 2143241 - T 100 -11.3 -5.5112 | opp_overlap 2143232 2143241 TGCAGTAACAAAAAA GCCAGCT TATT AGCTGGC TTTTTTGTATTTATT TERM 2474 2143241 - 2143258 + T 100 -11.3 -5.61913 | opp_overlap 2143241, overlap 2143232 TGCAGTAACAAAAAA GCCAGCT TATT AGCTGGC TTTTTTGTATTTATT Spea_1763 2145269 - 2143485 - | sulfatase TERM 2475 2144933 - 2144917 - G 73 -2.2 -5.27023 | AGGTCAAAAACAAAA GGACTT AGGTG AAGGCC GTAATCGTCATAAAT Spea_1764 2145568 - 2145353 - | hypothetical protein Spea_1765 2146033 - 2147061 + | nucleoid-associated protein NdpA TERM 2476 2147108 - 2147126 + F 100 -7.4 -5.75945 | opp_overlap 2147108 TAATGAACCAGAGAA CCGAGC CATAAGT GCTCGG TTTTTTTTCGGACAT Spea_1766 2147346 - 2148221 + | hypothetical protein Spea_1767 2148259 - 2149101 + | peptidase M23B TERM 2477 2149174 - 2149116 - T 100 -33.1 -3.34522 | gap 1, opp_overlap 2149130 2149137, overlap 2149137 AGATCTTCTAAGCAA TG-CGTTCGACCCAATAAAAAAGCAGTC ATTA GACTGCTTTTTTATTGGGTCGAACGACA GCGTTACTTATAACG TERM 2478 2149130 - 2149159 + T 100 -15.3 -3.05384 | opp_overlap 2149116 2149137, overlap 2149137 ATGCGTTCGACCCAA TAAAAAAGCAGTC ATTA GACTGCTTTTTTA TTGGGTCGAACGACA TERM 2479 2149152 - 2149137 - T 95 -9 -5.4833 | opp_overlap 2149130 2149137, overlap 2149116 CGACCCAATAAAAAA GCAGTC ATTA GACTGC TTTTTTATTGGGTCG TERM 2480 2149137 - 2149152 + T 95 -9 -5.4833 | opp_overlap 2149137 2149116, overlap 2149130 CGACCCAATAAAAAA GCAGTC ATTA GACTGC TTTTTTATTGGGTCG Spea_1768 2149684 - 2149178 - | hypothetical protein TERM 2481 2149854 - 2149881 + G 76 -2 -5.3236 | gap 1, overlap 2149870 CCATTCATTGCCGGA GGCTTATTT-GCA ATC TGCTGGATTAGCC TTTTTTATGCGTTAT TERM 2482 2151786 - 2151774 - g 72 -4.7 -4.72846 | opp_overlap 2151778 2151782 GGAGATATCGAAAAA CTCGC TGA GCGGG CACTGCTTGGTATGA Spea_1769 2149716 - 2152154 + | DNA internalization-related competence protein ComEC/Rec2 Spea_1770 2152187 - 2154010 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 2483 2154479 - 2154494 + G 79 -9 -4.1157 | opp_overlap 2154476 CAGCATTACCAATTG GCTCGA GATA TCGAGC TTATTATTCTTGATG Spea_1771 2154011 - 2155003 + | tetraacyldisaccharide 4'-kinase Spea_1772 2155015 - 2155188 + | hypothetical protein TERM 2484 2155201 - 2155232 + F 100 -13.2 -3.84825 | opp_overlap 2155203 2155210, overlap 2155203 2155210 TAAGTTTTGAGACCT AATAAAAAAGCGCC TTTT GGCGCTTTTTTATA TTTCATATCAATAGA TERM 2485 2155203 - 2155230 + F 100 -15.8 -3.51034 | opp_overlap 2155203 2155210, overlap 2155201 2155210 AGTTTTGAGACCTAA TAAAAAAGCGCC TTTT GGCGCTTTTTTA TATTTCATATCAATA TERM 2486 2155230 - 2155203 - f 100 -15.8 -3.1247 | opp_overlap 2155203 2155201 2155210, overlap 2155210 AGTTTTGAGACCTAA TAAAAAAGCGCC TTTT GGCGCTTTTTTA TATTTCATATCAATA TERM 2487 2155210 - 2155223 + F 100 -9.5 -5.5762 | opp_overlap 2155203 2155210, overlap 2155203 2155201 AGACCTAATAAAAAA GCGCC TTTT GGCGC TTTTTTATATTTCAT TERM 2488 2155223 - 2155210 - f 100 -9.5 -5.49234 | opp_overlap 2155210 2155203 2155201, overlap 2155203 AGACCTAATAAAAAA GCGCC TTTT GGCGC TTTTTTATATTTCAT TERM 2489 2157035 - 2157018 - g 72 -8.5 -3.73775 | TTGAGCCTTATGAAA CTTTACC AGCA GGTAAAG CGAAAGGAATAAAAG TERM 2490 2157215 - 2157190 - g 79 -8.3 -4.27316 | CCTTGCAACGGAAAA CGATATGCAGA GCAA TCTGCTCATCG ATATGACACCAAACA Spea_1773 2155634 - 2158717 + | peptidase M11 gametolysin TERM 2491 2158772 - 2158799 + T 100 -21.4 -3.22388 | opp_overlap 2158772 CGAATGATAAATAAA GAGGGCGACGGT ATAT ACCGTCGCCCTC TTGCTAAGTTAAATA TERM 2492 2158799 - 2158772 - T 100 -21.4 -4.62622 | opp_overlap 2158772 CGAATGATAAATAAA GAGGGCGACGGT ATAT ACCGTCGCCCTC TTGCTAAGTTAAATA Spea_1774 2161271 - 2158857 - | hypothetical protein TERM 2493 2161955 - 2161942 - R 75 -8.1 -3.99592 | opp_overlap 2161935 AGTTATTATCAGAAA GGAGC TGTG GCTCC ATACTGGTATCATGA Spea_1775 2162838 - 2162047 - | DSBA oxidoreductase Spea_1776 2164251 - 2162881 - | sigma-54 dependent trancsriptional regulator TERM 2494 2163556 - 2163573 + g 93 -9.8 -4.72272 | TATGTATTGTTTGTC GGCGCC AGTAAA GGCGCC TTTTTCGTGGCCAAA TERM 2495 2163789 - 2163803 + g 72 -2.8 -5.00884 | TGATGGAACGAGAGT CACC CAATAAT GGTG TTTTTTGGCCGAACT Spea_1777 2166825 - 2164510 - | hypothetical protein TERM 2496 2166610 - 2166631 + g 73 -10.1 -3.45945 | opp_overlap 2166609 2166610 ATTGCCATCAGGAAG TGCTGCGGC AGAA GCCGGAGCA TTCATTCTCGGTCCA TERM 2497 2166967 - 2167024 + r 91 -11.7 -3.95448 | opp_overlap 2166986, overlap 2166969 2166970 TTTGATTTATCTTGA TTTTTTTCAGTTACTTAAACTGTTTCA TAAG TGGAACAGTTTAAGTAACTAAGAGGTA TTTGGATTTTGATGT TERM 2498 2166969 - 2167022 + r 100 -14.3 -3.55481 | opp_overlap 2166986, overlap 2166967 2166970 TGATTTATCTTGATT TTTTTCAGTTACTTAAACTGTTTCA TAAG TGGAACAGTTTAAGTAACTAAGAGG TATTTGGATTTTGAT TERM 2499 2166970 - 2167021 + r 95 -15.6 -2.72204 | opp_overlap 2166986, overlap 2166969 2166967 GATTTATCTTGATTT TTTTCAGTTACTTAAACTGTTTCA TAAG TGGAACAGTTTAAGTAACTAAGAG GTATTTGGATTTTGA Spea_1778 2168601 - 2167162 - | hypothetical protein TERM 2500 2168809 - 2168824 + r 87 -6.1 -5.18355 | opp_overlap 2168809, overlap 2168803 GATCTAAATAAAAAA GGCTG AATGAA CAGCC TTTTTAGTTTTTCAA TERM 2501 2168824 - 2168809 - R 95 -6.1 -5.65927 | opp_overlap 2168809 2168803 GATCTAAATAAAAAA GGCTG AATGAA CAGCC TTTTTAGTTTTTCAA Spea_1779 2171953 - 2168876 - | acriflavin resistance protein Spea_1780 2175258 - 2171950 - | acriflavin resistance protein TERM 2502 2175258 - 2175271 + r 80 -2.3 -5.63103 | opp_overlap 2175258 TTTTTATAATAGACA TAGGG TGTT CCCCA TTTTTTTAGTTAGCG Spea_1781 2176471 - 2175365 - | RND family efflux transporter MFP subunit TERM 2503 2176758 - 2176773 + r 88 -9 -4.64144 | opp_overlap 2176758 GTGGGCATAAAAAAA GCACTC AGTT GAGTGC TTTTTACAAATTGTT TERM 2504 2176773 - 2176758 - R 100 -9 -5.60993 | opp_overlap 2176758 GTGGGCATAAAAAAA GCACTC AGTT GAGTGC TTTTTACAAATTGTT Spea_1782 2176983 - 2176888 - | citrate synthase I TERM 2505 2177077 - 2177103 + r 83 -12.4 -2.82261 | opp_overlap 2177082, overlap 2177082 AGGGTAGACTCAATA AAAAAGGCACTC AAT GAGTGCCTTTTA GTTCTGCTTTATTTC TERM 2506 2177082 - 2177098 + r 100 -12.3 -4.53685 | opp_overlap 2177082, overlap 2177077 AGACTCAATAAAAAA GGCACTC AAT GAGTGCC TTTTAGTTCTGCTTT TERM 2507 2177098 - 2177082 - R 100 -12.3 -5.49234 | opp_overlap 2177082 2177077 AGACTCAATAAAAAA GGCACTC AAT GAGTGCC TTTTAGTTCTGCTTT TERM 2508 2177397 - 2177381 - R 100 -12.3 -5.49234 | opp_overlap 2177381 AGACTCAATAAAAAA GGCACTC AAT GAGTGCC TTTAAGCTTTACTTA TERM 2509 2177381 - 2177397 + r 90 -12.3 -3.74178 | opp_overlap 2177381 AGACTCAATAAAAAA GGCACTC AAT GAGTGCC TTTAAGCTTTACTTA Spea_1783 2178784 - 2177495 - | type II citrate synthase TERM 2510 2178437 - 2178426 - G 72 -5.8 -4.4448 | opp_overlap 2178426, overlap 2178415 AAACCTGCAAAGAAA GCAG ACAA CTGC TCATTCACCATGGTG TERM 2511 2179126 - 2179157 + H 72 -8.8 -3.53012 | opp_overlap 2179125 2179126 TTTCTTTTGCAAAAG TTCCAAACCGTGAT CTGG ATCACTGATTGGAA TTTAAGCAAAAGCGG TERM 2512 2179202 - 2179191 - H 70 -5.8 -4.42868 | ATATAACAAAAAATA GCTC AATT GAGC AGAGTGAGCAGAACG Spea_1784 2179217 - 2179591 + | succinate dehydrogenase cytochrome b556 subunit TERM 2513 2179604 - 2179629 + G 70 -5.3 -4.52415 | opp_overlap 2179597 2179604 TAACTAACGCAGCAA GTCTTGGCCGC AGTG GTGTCCATGAC TTTATTCTTATACGT Spea_1785 2179579 - 2179932 + | succinate dehydrogenase hydrophobic membrane anchor TERM 2514 2180042 - 2180020 - g 72 -6.3 -4.20817 | opp_overlap 2180025 CAGATTTCAAAAGAA GGTAAGAGC TGCGC GCTCTTATC TAAAGTTTTCCCAAC Spea_1786 2179933 - 2181699 + | succinate dehydrogenase flavoprotein subunit Spea_1787 2181712 - 2182419 + | succinate dehydrogenase iron-sulfur subunit TERM 2515 2182458 - 2182485 + F 100 -15 -5.39721 | opp_overlap 2182460 GATATAGCTCTATAC GAGTCACTTTCC CTGT GGAGAGTGACTC TTTTTTGTGTCATGG TERM 2516 2182483 - 2182460 - f 70 -9.6 -2.63301 | opp_overlap 2182458 TATAGCTCTATACGA GTCACTTTCC CTGT GGAGAGTGAC TCTTTTTTGTGTCAT TERM 2517 2182803 - 2182782 - g 75 -10.9 -3.05384 | CCTCCCTCTAGTTAA TGGCGCATC GGCT GATGCACCA GAAGCTGCCCACTCT TERM 2518 2185306 - 2185273 - g 75 -9.7 -3.61398 | gap 1, opp_overlap 2185284 2185294, overlap 2185276 2185284 GTTTGGTGCCAAGAA GAGCCGCAAAACCAAG GTG CTTGGTATTGCAG-TC AGCACCATTTCTGGA TERM 2519 2185304 - 2185276 - g 78 -12.5 -2.63073 | opp_overlap 2185284 2185294, overlap 2185273 2185284 TGGTGCCAAGAAGAG CCGCAAAACCAAG GTG CTTGGTATTGCAG TCAGCACCATTTCTG TERM 2520 2185296 - 2185284 - g 73 -7.7 -4.14874 | opp_overlap 2185284 2185294, overlap 2185276 2185273 AGAAGAGCCGCAAAA CCAAG GTG CTTGG TATTGCAGTCAGCAC Spea_1788 2182627 - 2185449 + | alpha-ketoglutarate decarboxylase TERM 2521 2185481 - 2185470 - f 76 -4.4 -5.02502 | GACATTATATAAAAA GGAT CGTA ATCC ATGAGTATCGAAATT Spea_1789 2185482 - 2186678 + | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Spea_1790 2186757 - 2187923 + | succinyl-CoA synthetase subunit beta Spea_1791 2187923 - 2188795 + | succinyl-CoA synthetase, alpha subunit TERM 2522 2188830 - 2188816 - f 85 -9.2 -4.29396 | opp_overlap 2188816 2188827 AATTAGTTATTAAAA GGCGCC TAG AGCGCC TTTTTTATTGCCTAA TERM 2523 2188816 - 2188830 + F 95 -8.5 -5.4833 | opp_overlap 2188816, overlap 2188827 AATTAGTTATTAAAA GGCGC CTAGA GCGCC TTTTTTATTGCCTAA Spea_1792 2189051 - 2189359 + | hypothetical protein TERM 2524 2189357 - 2189377 + F 70 -9.7 -2.6704 | opp_overlap 2189360, overlap 2189355 2189353 AATATCTCCAGTAAG TAAGGGCTC GTG GAGCCCCTA TCCATTTCGCATTTC TERM 2525 2189374 - 2189360 - f 85 -11.4 -3.40073 | opp_overlap 2189357 2189355 2189353 ATCTCCAGTAAGTAA GGGCTC GTG GAGCCC CTATCCATTTCGCAT TERM 2526 2189431 - 2189420 - f 81 -5.8 -5.15969 | GGCTAATCGAAAAAA TCGG CTAC CCGA AAGACTTTGCTTTGG Spea_1793 2189752 - 2190672 + | auxin efflux carrier Spea_1794 2192325 - 2190673 - | ferredoxin-dependent glutamate synthase TERM 2527 2192529 - 2192543 + G 72 -2.8 -5.06816 | opp_overlap 2192529 CATTTCGAGGCTAAA GATACC AGA GCTATC TTTTTGTTGAACAGT Spea_1795 2192478 - 2192978 + | GCN5-related N-acetyltransferase TERM 2528 2193034 - 2193004 - T 70 -8.5 -3.27382 | gap 1, opp_overlap 2193010 2193012, overlap 2193012 GCTAATAAATAGATA CA-AAAAAACCAGC CTTA GCTGGTCTTTTATG GCGGACGCTGCAGTT TERM 2529 2193010 - 2193027 + T 70 -5.5 -4.36914 | opp_overlap 2193004 2193012, overlap 2193012 AAATAGATACAAAAA AACCAGC CTTA GCTGGTC TTTTATGGCGGACGC TERM 2530 2193012 - 2193025 + T 73 -8.1 -3.79419 | opp_overlap 2193004 2193012, overlap 2193010 ATAGATACAAAAAAA CCAGC CTTA GCTGG TCTTTTATGGCGGAC TERM 2531 2193025 - 2193012 - T 100 -8.1 -5.77988 | opp_overlap 2193012 2193010, overlap 2193004 ATAGATACAAAAAAA CCAGC CTTA GCTGG TCTTTTATGGCGGAC Spea_1796 2193479 - 2193048 - | ferric uptake regulator Spea_1797 2193748 - 2194473 + | NAD-dependent deacetylase TERM 2532 2194683 - 2194695 + G 74 -3.4 -4.9725 | GCATTTTAAGGTTTG CTCA ACCGA TGAG TTTTTCTATCAAGAT Spea_1798 2194546 - 2195010 + | hypothetical protein TERM 2533 2195526 - 2195549 + T 100 -12.6 -5.11112 | opp_overlap 2195526 TTAAGTAATAAAAAA GCCTATAGAT TTAC ATCTATAGGC TTTTTATTAAAGTTT TERM 2534 2195549 - 2195526 - T 100 -12.6 -5.5604 | opp_overlap 2195526 TTAAGTAATAAAAAA GCCTATAGAT TTAC ATCTATAGGC TTTTTATTAAAGTTT Spea_1799 2197681 - 2195597 - | elongation factor G Spea_1800 2199434 - 2198094 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 2535 2199111 - 2199095 - G 76 -2.2 -5.40474 | opp_overlap 2199095 2199102 AGTCGGCTAAAAAAA CCTTAG TCAGC CTAGGG CTTGTCATTTCGATA TERM 2536 2199197 - 2199220 + g 80 -6.8 -4.67755 | gap 1, overlap 2199199 2199200 GACTCAATTGCGCAG TCTGTTGTTGC ATA GCAGCAAC-GA TTTTTGGGTGACTAT Spea_1801 2199684 - 2200736 + | biotin synthase TERM 2537 2200955 - 2200975 + F 89 -9.7 -4.21631 | opp_overlap 2200955 ACGAGAACAAGATGA CCCGCTTTA AAT TGAGGCGGG TTTATTAGGTAAATT TERM 2538 2201096 - 2201078 - g 100 -8.2 -5.24531 | overlap 2201080 AGTGGTTACAAAAAA TCGCTCAT TGG ATGAGCAA GGGCTGCTAAGGCAG Spea_1802 2201013 - 2202206 + | aminotransferase class I and II Spea_1803 2202291 - 2203061 + | methyltransferase type 11 Spea_1804 2203089 - 2203754 + | dethiobiotin synthase TERM 2539 2203798 - 2203834 + F 71 -6 -4.18737 | gap 1, opp_overlap 2203798 ATTCGATAAAAAGCA GCCTAATTCA-ACGGGA TATT TTCTGAGTGAATTAGGC TTATCTTTTTGTTAA Spea_1805 2204080 - 2204943 + | heat shock protein HtpX TERM 2540 2204965 - 2204993 + F 100 -18.3 -5.5112 | opp_overlap 2204965 TTACTTGCAAGTAAA GCGGTTTGGGACT AAA AGTCTCAAACCGC TTTTTTATTGCTCAA TERM 2541 2204993 - 2204965 - f 100 -16.1 -3.91084 | opp_overlap 2204965 TTACTTGCAAGTAAA GCGGTTTGGGACT AAA AGTCTCAAACCGC TTTTTTATTGCTCAA Spea_1806 2205206 - 2205580 + | cytochrome c3 TERM 2542 2205600 - 2205577 - f 82 -11.2 -3.10343 | opp_overlap 2205581, overlap 2205581 AGATTCAGTACTTAA GTAATTTGAG TTAA CTCAAATTAC TGAAATGAGCCAGCC TERM 2543 2205609 - 2205626 + F 100 -8.4 -5.63645 | opp_overlap 2205609 2205606 AAATTACTGAAATGA GCCAGC CAATGT GCTGGC TTTTTTGTGTTTTAA TERM 2544 2207624 - 2207607 - gf 84 -7 -4.84017 | opp_overlap 2207607 2207605 AATCGGTCAGAAAAA TCAGCG GTTATT CGCTGA TGGTGTTTTTTCTAC Spea_1807 2205895 - 2208810 + | molybdopterin oxidoreductase TERM 2545 2208809 - 2208797 - g 81 -3.4 -5.31456 | GTAATGCAGAAAAAA CAGA TTGTC TCTG AAAAAATCACAACTG Spea_1808 2208785 - 2209759 + | uroporphyrin-III C-methyltransferase TERM 2546 2209912 - 2209902 - g 70 -2.4 -5.03314 | GCGAGGGGCAAAAAA GGCG CAG CGAC TCTAACCGTTGAGCA Spea_1809 2209848 - 2211074 + | glycosyl transferase family protein TERM 2547 2211536 - 2211494 - g 84 -10.7 -3.89291 | TTAACACTACAAGAA TTGCAAACTGAATTAGCTG ACCAG CAGCTGATCCAGCTTGCGA AAAGTAATCTGCAAC Spea_1810 2211062 - 2211652 + | response regulator receiver/ANTAR domain-containing protein TERM 2548 2211977 - 2211948 - f 95 -13.6 -3.68619 | opp_overlap 2211948 TTGAACCTAGGCAAA GGCGCCATCTTC TTTAGG GAAGAGGGCGCC TTTTTGTTTGCCAAA TERM 2549 2211948 - 2211977 + F 100 -14.3 -5.27335 | opp_overlap 2211948 TTGAACCTAGGCAAA GGCGCCATCTTCT TTAG GGAAGAGGGCGCC TTTTTGTTTGCCAAA Spea_1811 2212030 - 2214699 + | nitrite reductase (NAD(P)H), large subunit TERM 2550 2214829 - 2214846 + G 74 -11.3 -2.90496 | opp_overlap 2214824, overlap 2214826 TCGATAATATTGACC CCGCAAC TGGC GTTGCGG TGCTTTCACGGGGAC TERM 2551 2215006 - 2214989 - g 70 -4.8 -4.37763 | TGAGTTAAAAAAAGA GCAAGG TAGGGT CCTCGC AAAATTGCCTTTTCA Spea_1812 2214696 - 2215076 + | nitrite reductase (NAD(P)H), small subunit TERM 2552 2215725 - 2215702 - g 100 -8.2 -5.09426 | gap 1, opp_overlap 2215722, overlap 2215721 TTTAAGCCTAAAAAA GCTGGCGCACT GGA AGT-CACCAGC AAAAAAGACTTGCTG Spea_1813 2215078 - 2216544 + | nitrite transporter TERM 2553 2216660 - 2216693 + G 75 -11.2 -3.10796 | gap 1, opp_overlap 2216660, overlap 2216662 AAGCCTTTGAACGAA GATG-CCATTGGGAG CCGTA TTCCCAATGGGCATC TGTTGAGTACTAAAG TERM 2554 2216693 - 2216660 - g 77 -10.5 -3.34192 | gap 1, opp_overlap 2216660 2216662 AAGCCTTTGAACGAA GATG-CCATTGGGA GCCGTAT TCCCAATGGGCATC TGTTGAGTACTAAAG Spea_1814 2216549 - 2218339 + | serine/threonine protein kinase Spea_1815 2218439 - 2219581 + | TPR repeat-containing protein Spea_1816 2219874 - 2220425 + | curlin-associated protein Spea_1817 2220539 - 2221174 + | LuxR family transcriptional regulator Spea_1818 2221171 - 2221632 + | hypothetical protein Spea_1819 2221645 - 2222052 + | curli production assembly/transport component CsgF precursor TERM 2555 2222279 - 2222303 + G 78 -6.3 -4.65895 | TAGTAACTTCTCGAC TGCTGTGCCTC AAA GCGGTACTGCA TTTTTAGCTCAGGCG Spea_1820 2222055 - 2222903 + | curli production assembly/transport component CsgG TERM 2556 2222942 - 2222958 + F 100 -12.3 -4.65458 | opp_overlap 2222942 TTAGATATTTCATAA GGCACCA ATT TGGTGCC TTTGTTATTTCTATC TERM 2557 2222958 - 2222942 - f 87 -12.3 -3.35934 | opp_overlap 2222942 TTAGATATTTCATAA GGCACCA ATT TGGTGCC TTTGTTATTTCTATC Spea_1821 2223106 - 2223444 + | hypothetical protein TERM 2558 2223809 - 2223828 + G 72 -5 -4.62471 | overlap 2223811 CAGGTCGTTATGTCT GCTCTGAT TGCT ATCAGATC TTTTTAAAAGTTAAG Spea_1822 2223553 - 2223906 + | hypothetical protein TERM 2559 2223917 - 2223938 + T 71 -7.3 -3.95852 | opp_overlap 2223918, overlap 2223918 2223920 CATAATGGCAAAAAA ATAGTCGGT ATAG ACCGACTAC TTTCATTCATACAAT TERM 2560 2223937 - 2223918 - T 100 -10.8 -5.48303 | opp_overlap 2223917 2223918 2223920 ATAATGGCAAAAAAA TAGTCGGT ATAG ACCGACTA CTTTCATTCATACAA TERM 2561 2223918 - 2223937 + T 78 -10.8 -2.97029 | opp_overlap 2223918, overlap 2223917 2223920 ATAATGGCAAAAAAA TAGTCGGT ATAG ACCGACTA CTTTCATTCATACAA Spea_1823 2224387 - 2223974 - | TetR family transcriptional regulator TERM 2562 2224351 - 2224368 + g 82 -7 -4.89063 | GTACTAGTTCTGTGG CCGCAT CGAGTA ATGCGG TTTCTTTTTCCGTAA Spea_1824 2224584 - 2224940 + | histidine triad (HIT) protein Spea_1825 2224937 - 2225443 + | thioesterase superfamily protein Spea_1826 2225430 - 2225936 + | thioesterase superfamily protein Spea_1827 2225993 - 2226382 + | hypothetical protein TERM 2563 2226454 - 2226409 - f 90 -12.9 -2.57013 | gap 1, opp_overlap 2226423, overlap 2226423 TGTTAACTTAAGTCA CCA-ACGTAAAAAAACGTCAGC TAA GCTGACGTTTTTTTATGCATAG CGTTCATATTTCTTA TERM 2564 2226439 - 2226423 - f 100 -12.3 -5.54192 | opp_overlap 2226423, overlap 2226409 ACCAACGTAAAAAAA CGTCAGC TAA GCTGACG TTTTTTTATGCATAG TERM 2565 2226423 - 2226439 + F 100 -12.3 -5.64274 | opp_overlap 2226423 2226409 ACCAACGTAAAAAAA CGTCAGC TAA GCTGACG TTTTTTTATGCATAG TERM 2566 2228617 - 2228632 + G 78 -6.2 -4.7254 | opp_overlap 2228617 AGTAATGAATCTAAA TCTGAT GCGT ATCAGA TTTTTAATGCCAAAT Spea_1828 2226691 - 2228829 + | TonB-dependent receptor TERM 2567 2228879 - 2228856 - f 77 -11 -2.749 | overlap 2228855 2228850 2228853 TAATCTAAACAACAT TGAGCCGCAC CCGA GTGCGGCTGA GGTCAATAAAATGAA Spea_1829 2228890 - 2229150 + | hypothetical protein TERM 2568 2229174 - 2229205 + F 87 -3.1 -5.77571 | overlap 2229194 TAAGTGCCAATGAAA TGACCATGGAT ATTCAGTTGG ATCTGTGGTCA TTTTTATTTTTTGAT Spea_1830 2229271 - 2229933 + | nicotinamide mononucleotide transporter PnuC Spea_1831 2229934 - 2230995 + | aminoglycoside phosphotransferase TERM 2569 2231525 - 2231537 + G 77 -3.3 -5.1861 | GATGGTTGCACTTGC CGCTG GTA CAGAG TTTTTTGGTGGTGCC Spea_1832 2231316 - 2231909 + | DoxX family protein TERM 2570 2231943 - 2231961 + F 95 -8.9 -5.5208 | opp_overlap 2231943 ATGATACTAACGAGA TCCCACT GAGTA AGTGGGA TTTTTTGTATTATCG Spea_1833 2232132 - 2232680 + | nitroreductase Spea_1834 2232804 - 2233403 + | GCN5-related N-acetyltransferase TERM 2571 2233691 - 2233703 + G 72 -6.2 -4.25458 | TAGCCAAGCGGGGGA GGCG GAAGA CGCC TTTGTTAGTGAGCTT Spea_1835 2233617 - 2234021 + | hypothetical protein TERM 2572 2234104 - 2234133 + F 75 -5.8 -4.75174 | gap 1, opp_overlap 2234106 TACTGCAAATGTGAA TAGAGTC-GCCAA ACATC TCGGCTGACTCTA TTTTTAACTTAAGTA Spea_1836 2234294 - 2234683 + | hypothetical protein Spea_1837 2235133 - 2235819 + | ABC transporter related Spea_1838 2235809 - 2236900 + | multidrug resistance efflux pump-like protein TERM 2573 2237417 - 2237402 - g 95 -7.6 -5.30155 | overlap 2237394 TCATTAATCAAAAAA TTGAGC TTGA GCTCAA AGGTGCCGAACAGCG Spea_1839 2236897 - 2238063 + | membrane-fusion protein Spea_1840 2238060 - 2239349 + | membrane-fusion protein Spea_1841 2239346 - 2240659 + | hypothetical protein TERM 2574 2240679 - 2240703 + F 100 -14.4 -5.72118 | opp_overlap 2240679 TGCGTACTATTAAAA TAACCCGCGA TAACC TCGCGGGTTA TTTTTTGTCTTTTTT TERM 2575 2240703 - 2240679 - f 100 -14.4 -4.30576 | opp_overlap 2240679 TGCGTACTATTAAAA TAACCCGCGA TAACC TCGCGGGTTA TTTTTTGTCTTTTTT Spea_1842 2240933 - 2241559 + | Ion transport 2 domain-containing protein Spea_1843 2241570 - 2242721 + | hypothetical protein TERM 2576 2242748 - 2242778 + F 71 -4.8 -4.59773 | gap 1, opp_overlap 2242754 2242756, overlap 2242754 2242756 GTTAGCTACTTTCAA TGAAAATAGGCGC CACAGA GCGCCCATTT-CA TTTTTAGCCCTAAAC TERM 2577 2242773 - 2242754 - f 80 -7.8 -4.41494 | opp_overlap 2242754 2242748 2242756, overlap 2242756 TACTTTCAATGAAAA TAGGCGCC ACAG AGCGCCCA TTTCATTTTTAGCCC TERM 2578 2242771 - 2242756 - f 73 -8.2 -3.8125 | opp_overlap 2242754 2242748 2242756, overlap 2242754 CTTTCAATGAAAATA GGCGCC ACAG AGCGCC CATTTCATTTTTAGC TERM 2579 2242793 - 2242812 + F 89 -12.2 -3.44319 | opp_overlap 2242793 ATTTTTAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 2580 2242812 - 2242793 - f 89 -12.2 -3.57263 | opp_overlap 2242793 ATTTTTAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 2581 2243217 - 2243196 - f 100 -14.5 -3.66883 | opp_overlap 2243187 2243196, overlap 2243189 2243187 GCAACAGATGGCAAA GCCACCTTC TTCA GAAGGTGGC TTCTTTACTGGCTAT TERM 2582 2243196 - 2243217 + F 100 -14.5 -4.01902 | opp_overlap 2243189 2243187 2243196, overlap 2243187 GCAACAGATGGCAAA GCCACCTTC TTCA GAAGGTGGC TTCTTTACTGGCTAT TERM 2583 2243937 - 2243949 + G 79 -9.1 -4.11585 | ATTATTGTTCGATCT CGCCT TAG AGGCG TTATTTATACTGAAT Spea_1844 2243350 - 2244402 + | hypothetical protein Spea_1845 2244402 - 2245556 + | hypothetical protein Spea_1846 2245546 - 2246046 + | hypothetical protein TERM 2584 2246618 - 2246584 - T 72 -9.3 -3.41125 | opp_overlap 2246587 GGCACATAGGGATAA CACTTTAGGCCGCTA GAGCA TAGCGGCCAATAATG CTTACGGGCACTACT Spea_1847 2246949 - 2246629 - | hypothetical protein Spea_1848 2247174 - 2246974 - | hypothetical protein Spea_1849 2250600 - 2247286 - | hypothetical protein TERM 2585 2248292 - 2248279 - G 84 -8.1 -4.56597 | GGTTTGGCTTAAAAA CGCCA AGAT TGGCG CAAATTCACTACTAA TERM 2586 2250233 - 2250243 + g 74 -6.8 -4.27861 | opp_overlap 2250233 GATGCTTTTAATGCA CTGG GCG CCAG TTTTACCTCTATATT Spea_1850 2251738 - 2250740 - | hypothetical protein TERM 2587 2251680 - 2251670 - G 72 -3.2 -5.06816 | AGGCTGTAATAAAAA TGGA GTT CCCA TGGCGATGGTGTAGA TERM 2588 2251781 - 2251799 + r 83 -7.4 -4.731 | opp_overlap 2251780 2251783 AGATTACTAACATAT CAGAAGGT AAT ACCGTCTG TTTTATTGGTACATT TERM 2589 2252095 - 2252074 - R 75 -9.5 -3.29511 | opp_overlap 2252074 TTGATTGCGCTAGAA GAGATCTAC GATT GTAGACCTC TTGCTATGATTATTT Spea_1851 2252950 - 2252105 - | aldose 1-epimerase Spea_1852 2253169 - 2254959 + | acyl-CoA dehydrogenase domain-containing protein TERM 2590 2254969 - 2254988 + F 95 -12.2 -4.57073 | TTTTAAAGCATAGCG GCGGCTTT ACCT AAAGCCGC TTTTTACGAGCAATG TERM 2591 2255084 - 2255055 - f 100 -13.7 -5.10154 | opp_overlap 2255059 2255062 ATGTAAAACGAAAAA CTAAGAACCCAGT ATAA ACTGGGTTCTTTG CGTTAAAAGCTATCA TERM 2592 2255059 - 2255080 + F 95 -13.1 -3.75332 | opp_overlap 2255055, overlap 2255062 AAAACGAAAAACTAA GAACCCAGT ATAA ACTGGGTTC TTTGCGTTAAAAGCT TERM 2593 2255062 - 2255077 + F 83 -9 -4.0098 | opp_overlap 2255055, overlap 2255059 ACGAAAAACTAAGAA CCCAGT ATAA ACTGGG TTCTTTGCGTTAAAA Spea_1853 2255283 - 2255975 + | nucleotidase TERM 2594 2255982 - 2256005 + T 78 -3.8 -5.252 | overlap 2255983 2255983 CCGAGTTAAGATGGT GGCTAAATGC TTTA GCTTTTAGCG TTTTTTCTCGAAATG TERM 2595 2255983 - 2255997 + T 78 -7.2 -4.33739 | overlap 2255982 2255983 CGAGTTAAGATGGTG GCTAAA TGC TTTAGC TTTTAGCGTTTTTTC Spea_1854 2256611 - 2256000 - | hypothetical protein Spea_1855 2256743 - 2257108 + | hypothetical protein Spea_1856 2257188 - 2257484 + | putative transcriptional regulator, Fis family protein TERM 2596 2257881 - 2257865 - T 100 -12.3 -5.10064 | opp_overlap 2257865 GTTAATAGATAAAAA GGCTCCT TTT AGGAGCC TTTTCGCGTTTGTAA TERM 2597 2257865 - 2257881 + T 100 -12.3 -4.26189 | opp_overlap 2257865 GTTAATAGATAAAAA GGCTCCT TTT AGGAGCC TTTTCGCGTTTGTAA Spea_1857 2260102 - 2257913 - | peptidyl-dipeptidase Dcp TERM 2598 2260543 - 2260522 - R 89 -11.7 -3.60818 | opp_overlap 2260516 TGAAAATGTTTCAAA TATGGCTCT CGTA AGAGCCATA GGCTGAACTATTCTC Spea_1858 2262001 - 2260562 - | hypothetical protein TERM 2599 2262042 - 2262056 + H 70 -7.8 -3.67878 | overlap 2262043 GCATTATGCCGTGGG TTCCCC GCA GGGGAG TTCTGTTAAAGTCAT Spea_1859 2263272 - 2263901 + | XRE family transcriptional regulator TERM 2600 2263893 - 2263908 + F 85 -6.8 -5.15969 | GAGCAAAAACCTGCA CGGGGT TAGT ACTCCG TTTTTTGGGTTAGCG TERM 2601 2264002 - 2264025 + F 87 -6 -5.2853 | CGAAATATGAATAAA TGGCGCTAGC AAAA GTTAGTGTCA TTTTCTTTTTAGCTA Spea_1860 2264244 - 2265818 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 2602 2266037 - 2266057 + T 72 -8.3 -3.53722 | GGAAGCTGAGGTGAA CCGTAGC ACTAATG GCTACGG TTCTCTGGGTATGGA Spea_1861 2267017 - 2266076 - | transporter DMT superfamily protein TERM 2603 2266969 - 2266994 + g 72 -6.2 -4.20712 | gap 1, opp_overlap 2266962 2266966, overlap 2266966 AGAAAGCAGCAAGTG CGTTGCC-CTT AAATG AAGAGGCAGCG TTTTGGGATGTTGTG TERM 2604 2270205 - 2270218 + G 79 -9.5 -3.65812 | GGAGAGTTGTCACTG CGCGC CGAT GCGCG TTATATTGGCAAGCG Spea_1862 2268123 - 2270522 + | TonB-dependent receptor plug TERM 2605 2270535 - 2270565 + T 88 -11.2 -3.58801 | opp_overlap 2270538, overlap 2270537 2270538 TAAACGAGCCGCGCA TAAGCGAGTACTAC AGT GTAGTACTCGCATC TTTGAAAACTTATCT TERM 2606 2270537 - 2270563 + T 95 -13.8 -3.36837 | opp_overlap 2270538, overlap 2270535 2270538 AACGAGCCGCGCATA AGCGAGTACTAC AGT GTAGTACTCGCA TCTTTGAAAACTTAT TERM 2607 2270538 - 2270562 + T 100 -17.3 -2.6162 | opp_overlap 2270538, overlap 2270537 2270535 ACGAGCCGCGCATAA GCGAGTACTAC AGT GTAGTACTCGC ATCTTTGAAAACTTA TERM 2608 2270562 - 2270538 - T 100 -17.3 -3.2963 | opp_overlap 2270538 2270537 2270535 ACGAGCCGCGCATAA GCGAGTACTAC AGT GTAGTACTCGC ATCTTTGAAAACTTA TERM 2609 2270911 - 2270880 - T 95 -14 -3.32832 | gap 1, opp_overlap 2270880 2270882 2270891, overlap 2270873 2270875 GGGAAAAACATGTAA CAGGGTGAATATAGT TAC ACTAT-TTCACCCTG TATTGAAGCGGTTAG TERM 2610 2270880 - 2270911 + T 93 -14 -3.03159 | gap 1, opp_overlap 2270880 2270873 2270875, overlap 2270882 2270891 GGGAAAAACATGTAA CAGGGTGAATATAGT TAC ACTAT-TTCACCCTG TATTGAAGCGGTTAG TERM 2611 2270882 - 2270909 + T 78 -10.8 -3.07192 | gap 1, opp_overlap 2270880 2270873 2270875, overlap 2270880 2270891 GAAAAACATGTAACA GGGTGAATATAGT TAC ACTAT-TTCACCC TGTATTGAAGCGGTT Spea_1863 2271952 - 2270984 - | ribonucleoside hydrolase 1 TERM 2612 2271110 - 2271121 + g 71 -3.6 -4.86731 | overlap 2271101 CACTGTCATCCCTTG GGTG TATT CGCC TTTTGTTTCAACACC TERM 2613 2271776 - 2271766 - G 74 -6.8 -4.20696 | opp_overlap 2271766 CGAGCAAGGTTAAAA TGCG CAG CGCA TTGTTTAAGGTCTTA TERM 2614 2272158 - 2272132 - R 100 -17.4 -5.35224 | opp_overlap 2272129 2272128 TGTATAAAAACAAAA TCGCCCTTAGGC AAA ACCTAAGGGCGA GGGCTTATAGAAGAT Spea_1864 2274005 - 2272206 - | gamma-glutamyltransferase TERM 2615 2273163 - 2273177 + g 70 -10 -3.07994 | overlap 2273165 ATCGGCCAAGGTCAT GATGCC GCC GGCATC TTGAATGGCATTGAC TERM 2616 2273721 - 2273744 + g 76 -8 -4.20817 | opp_overlap 2273709 2273704, overlap 2273722 AAAGCCGACTGCAAC CGCGGCATCG ACCG CGTTGCCGCC TTGTTTTAGGATCTC TERM 2617 2273722 - 2273743 + g 75 -11.5 -3.11767 | opp_overlap 2273709 2273704, overlap 2273721 AAGCCGACTGCAACC GCGGCATCG ACCG CGTTGCCGC CTTGTTTTAGGATCT TERM 2618 2274452 - 2274464 + G 71 -6.9 -4.1891 | ATTGATGACGTTATT GCGGT GAT GCCGC TTTATATTAAAGCGC Spea_1865 2274200 - 2275420 + | hypothetical protein Spea_1866 2275817 - 2275491 - | hypothetical protein TERM 2619 2275609 - 2275643 + g 100 -15 -3.3334 | GCTTTGTCTTTATGT GTTGCTGCAGCCAGTG CTG CTCTAGCTGCAGCGAC TTGTGCGATGGCATT TERM 2620 2275863 - 2275877 + r 73 -5.7 -4.65032 | opp_overlap 2275863, overlap 2275875 AACGCGTTATAACAA TGGCT TGCCT AGCCA TTTCTTTATGGTTTA Spea_1867 2276248 - 2275913 - | hypothetical protein TERM 2621 2276494 - 2276458 - R 80 -10.3 -3.65294 | opp_overlap 2276464, overlap 2276464 GCGGAGAGAAAGCAA TAAAAATGCCAAGGCTA TAG CAGCATTGGCATTTTAA AAGTGAAGCGACTTA TERM 2622 2276464 - 2276488 + r 79 -8.6 -4.11216 | opp_overlap 2276458 2276464 AGAAAGCAATAAAAA TGCCAAGGCT ATAGC AGCATTGGCA TTTTAAAAGTGAAGC TERM 2623 2276488 - 2276464 - R 93 -9.3 -5.25906 | opp_overlap 2276464, overlap 2276458 AGAAAGCAATAAAAA TGCCAAGGCTA TAG CAGCATTGGCA TTTTAAAAGTGAAGC Spea_1868 2276884 - 2276507 - | hypothetical protein TERM 2624 2276574 - 2276588 + g 75 -10 -3.60104 | overlap 2276572 CACTTGTTGTAATTT CGGTGA ACT TCACCG TCTTTATAATCTAAG Spea_1869 2277560 - 2276940 - | lysine exporter protein LysE/YggA TERM 2625 2277192 - 2277171 - G 73 -7.9 -4.08111 | opp_overlap 2277170 2277171 TAAAGAGACCATAAA CGCCCACCC CTTA GGATTGGCG ATTGCTGTGAAAAAA TERM 2626 2277228 - 2277208 - G 72 -2.6 -5.00884 | opp_overlap 2277208 ATTGCTGTGAAAAAA CCTTGA GAGATAAGT TCAAGG TTACTGACGCGAGAT TERM 2627 2277663 - 2277649 - H 83 -3.5 -5.62288 | gap 1, opp_overlap 2277650, overlap 2277643 GCAAGAAAAGAAAAA CCAGCC TGAC GGC-GG CTTTACACCAAAATG TERM 2628 2278837 - 2278849 + G 83 -6.3 -5.04385 | opp_overlap 2278836 AAGTCTGGAGTAGAG CATCA AAT TGATG TTTTTTGGGAGTATA Spea_1870 2278702 - 2279517 + | hypothetical protein Spea_1871 2279689 - 2281341 + | hypothetical protein TERM 2629 2281650 - 2281665 + G 70 -4.7 -4.53419 | TCATATAAAGTAAGT GAGCA TCAGAT TGCTC TTTCTTGTTGTCATG TERM 2630 2281796 - 2281778 - g 76 -7.4 -4.26188 | TCTAGAGAGCGAAAA GTGGGTTG ACC CAACCGAC GACATAGCAGGGTTT TERM 2631 2282378 - 2282357 - g 78 -6.6 -4.67635 | TTTAAAATCACAAAA TGGGGCAA GTTCAA TTACCCCA AATGACAATATAATC Spea_1872 2281416 - 2283173 + | hypothetical protein Spea_1873 2285021 - 2283981 - | 4-hydroxyphenylpyruvate dioxygenase Spea_1874 2286271 - 2285111 - | homogentisate 12-dioxygenase Spea_1875 2286427 - 2287326 + | LysR family transcriptional regulator Spea_1876 2287728 - 2288087 + | hypothetical protein TERM 2632 2288222 - 2288180 - T 100 -16.5 -3.92996 | opp_overlap 2288186 2288192, overlap 2288181 2288186 2288192 GCTTAGACACAAGAA CTTAAACAGAAAGAGCCGC ATTTA GCGGCTCTTTCTGTTTACT GATGATACAAGCTTG TERM 2633 2288221 - 2288181 - T 100 -20 -2.95316 | opp_overlap 2288186 2288192, overlap 2288180 2288186 2288192 CTTAGACACAAGAAC TTAAACAGAAAGAGCCGC ATTTA GCGGCTCTTTCTGTTTAC TGATGATACAAGCTT TERM 2634 2288216 - 2288186 - T 100 -19.9 -3.88178 | opp_overlap 2288186 2288192, overlap 2288181 2288180 2288192 ACACAAGAACTTAAA CAGAAAGAGCCGC ATTTA GCGGCTCTTTCTG TTTACTGATGATACA TERM 2635 2288186 - 2288216 + T 100 -19.9 -3.80573 | opp_overlap 2288186 2288181 2288180 2288192, overlap 2288192 ACACAAGAACTTAAA CAGAAAGAGCCGC ATTTA GCGGCTCTTTCTG TTTACTGATGATACA TERM 2636 2288192 - 2288210 + T 95 -11.7 -4.37506 | opp_overlap 2288186 2288181 2288180 2288192, overlap 2288186 GAACTTAAACAGAAA GAGCCGC ATTTA GCGGCTC TTTCTGTTTACTGAT TERM 2637 2288210 - 2288192 - T 95 -11.7 -4.3665 | opp_overlap 2288192 2288186, overlap 2288186 2288181 2288180 GAACTTAAACAGAAA GAGCCGC ATTTA GCGGCTC TTTCTGTTTACTGAT Spea_1877 2289232 - 2288240 - | cytochrome-c peroxidase Spea_1878 2289716 - 2289486 - | integral membrane protein TerC Spea_1879 2289976 - 2290767 + | ABC transporter TERM 2638 2291011 - 2290997 - g 78 -5 -5.00884 | AGTTGCTGCAAAAAA GTCTAT CTG ACAGAC ATAGTGTTATTGCGT TERM 2639 2291662 - 2291637 - g 84 -7.7 -4.7373 | gap 1, opp_overlap 2291637 TGATTGCAGCAAAAA GCTTGCT-CGAT ACT ATCAAAGCAAGC TTATTGAATTTAACT Spea_1880 2290918 - 2291757 + | alpha/beta hydrolase fold Spea_1881 2292174 - 2291767 - | hypothetical protein TERM 2640 2292096 - 2292082 - G 71 -7.8 -3.95787 | TATGATACTGATAAA GCAGAG TAG CCCTGC AAACCACCATGCGAG TERM 2641 2293260 - 2293248 - g 75 -6.3 -4.42721 | opp_overlap 2293247 GAATTAGACAAGAAA TACCA TTT TGGTA AGTTGTATAAGCCTT Spea_1882 2292552 - 2293469 + | hypothetical protein Spea_1883 2293491 - 2293634 + | hypothetical protein Spea_1884 2294377 - 2294204 - | hypothetical protein Spea_1885 2294882 - 2295772 + | MscS mechanosensitive ion channel Spea_1886 2296709 - 2296140 - | hypothetical protein Spea_1887 2297622 - 2296792 - | phage exclusion protein Lit Spea_1888 2298582 - 2297800 - | hypothetical protein Spea_1890 2299174 - 2298749 - | hypothetical protein TERM 2642 2299062 - 2299083 + g 71 -3.7 -4.87008 | gap 1, opp_overlap 2299062 GAAGCATCTTTAACA CCTTTG-GCA ATC TGCACTAAGG TTTCTTTTATGTATT TERM 2643 2299435 - 2299398 - R 91 -10.7 -4.3255 | opp_overlap 2299405, overlap 2299400 CCTGTAACTAATAAA GAGGCAATAGAAGTTAG ATAT CAAACCTCTATTGCCTA AAGTCGTACAACAAT TERM 2644 2299433 - 2299400 - R 95 -13.3 -3.7642 | opp_overlap 2299405, overlap 2299398 TGTAACTAATAAAGA GGCAATAGAAGTTAG ATAT CAAACCTCTATTGCC TAAAGTCGTACAACA Spea_1891 2299851 - 2299645 - | XRE family transcriptional regulator TERM 2645 2299887 - 2299919 + H 71 -6.3 -4.16785 | opp_overlap 2299886 2299904, overlap 2299886 AAGACTATCCAAAGT TGCGGCTTATAAAGC CAC GGATTATAATCCGCA TTTAGTTTGTAATGT TERM 2646 2300136 - 2300115 - g 73 -10.3 -3.07307 | CAAAGTGTTAGTGAA GCCTATAAA TTTA TTTATAGGC AGGTCTGTCGACTCG Spea_1892 2299980 - 2300519 + | hypothetical protein TERM 2647 2301559 - 2301543 - g 71 -3.7 -4.84274 | TAAGTAGAGTAAAAA CCGAA TTATATT TTCGG CAAATACTAGGTCGT Spea_1893 2300525 - 2301943 + | type III restriction protein res subunit Spea_1894 2302910 - 2302098 - | hypothetical protein TERM 2648 2302196 - 2302186 - G 77 -6.8 -4.44284 | AATGGAATATCAAAA GCGA CAT TCGC AAAAGCAGCAATGGC TERM 2649 2303204 - 2303184 - R 72 -9 -3.36557 | AAGTATGGCAATCAA GTATGCGG TAATG CCGCACAC AACCGTGGAGTAGTT Spea_1895 2303528 - 2303250 - | hypothetical protein Spea_1896 2305251 - 2304868 - | hypothetical protein Spea_1897 2307295 - 2305253 - | integrase family protein TERM 2650 2306371 - 2306399 + g 70 -2.3 -5.02074 | overlap 2306353 2306376 2306377 TGAATACGGTTTCGC CAGTTTCTACTCG TTG CGAGTGGCTGTTG TTTTTTAGCGCATAG TERM 2651 2306535 - 2306517 - G 76 -7.4 -4.30844 | AGTTCATTATCAAAA TTACGGCA GGA CGCCGCAA TGATACTGCCAGGAT Spea_1898 2309985 - 2307295 - | hypothetical protein TERM 2652 2308210 - 2308221 + g 74 -5.8 -4.56597 | TGTGTCGCTTCTATA GCCA GCTC TGGC TTTTTGAAGAACAAC Spea_1899 2311365 - 2309986 - | integrase family protein Spea_1900 2311491 - 2312213 + | MscS mechanosensitive ion channel Spea_1901 2312303 - 2313247 + | response regulator receiver modulated CheW protein TERM 2653 2313259 - 2313224 - T 85 -9.2 -4.1891 | GTGGTGCAAGATAAA TTAAGAGAAACGCTAA CCAG TTAGCCCCTCTCTTAA TAAGCATCTTTATAA Spea_1902 2313953 - 2313309 - | hypothetical protein TERM 2654 2314009 - 2313977 - R 100 -22.3 -5.40072 | opp_overlap 2313977 2313981 TTCCTTTTAAAAAAA CAAAGCGCACAATCT ATG AGATTGTGCGCTTTG TTTGATACTTCGCAA TERM 2655 2313977 - 2314009 + r 100 -22.3 -3.84246 | opp_overlap 2313977, overlap 2313981 TTCCTTTTAAAAAAA CAAAGCGCACAATCT ATG AGATTGTGCGCTTTG TTTGATACTTCGCAA TERM 2656 2313981 - 2314005 + r 100 -17.3 -4.53349 | opp_overlap 2313977, overlap 2313977 TTTTAAAAAAACAAA GCGCACAATCT ATG AGATTGTGCGC TTTGTTTGATACTTC Spea_1903 2314399 - 2314040 - | hypothetical protein TERM 2657 2314185 - 2314166 - G 70 -9.4 -3.42056 | overlap 2314175 ATCGCTAACCCAGAA CTCTAGAA ACTC TTCTAGAG TGATAGCAATCGCCT TERM 2658 2315621 - 2315633 + G 71 -3.3 -4.78149 | overlap 2315614 2315612 CCTGCCGTCGGGTCA TACGG GCC CCGCA TTTTTAGGTTATGAC Spea_1904 2314764 - 2315954 + | lytic murein transglycosylase Spea_1905 2316083 - 2316565 + | peptidylprolyl isomerase FKBP-type TERM 2659 2316605 - 2316589 - f 90 -12.3 -3.74693 | opp_overlap 2316589, overlap 2316566 TGTCAGTTGACTAAA GCCCAAC AGT GTTGGGC TTTTTTATTGCATCT TERM 2660 2316589 - 2316605 + F 100 -12.3 -5.49234 | opp_overlap 2316566 2316589 TGTCAGTTGACTAAA GCCCAAC AGT GTTGGGC TTTTTTATTGCATCT Spea_1906 2316639 - 2316857 + | hypothetical protein Spea_1907 2316970 - 2317650 + | carboxylesterase TERM 2661 2317636 - 2317661 + F 73 -5.5 -4.61482 | overlap 2317633 TTACAGCAAGTACTG GCAAACGGT AAGTAGAG ACTGTTTGC TTGTTTTTTGAACAG TERM 2662 2319575 - 2319562 - g 73 -9.5 -3.35679 | TGTTCCTAGTTACAA CGCCG CTGG CGGCG ATGGCTACCCAGTAC Spea_1908 2318021 - 2319739 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 2663 2319762 - 2319777 + F 100 -10.4 -5.9667 | opp_overlap 2319762 AGTTAATCCGGAAAA GCAGCC TTGT GGCTGC TTTTTTTATATTTTT TERM 2664 2319777 - 2319762 - f 89 -10.4 -4.1466 | opp_overlap 2319762 AGTTAATCCGGAAAA GCAGCC TTGT GGCTGC TTTTTTTATATTTTT Spea_1909 2320035 - 2320475 + | heat shock protein Hsp20 TERM 2665 2320513 - 2320529 + T 80 -7.9 -4.45723 | opp_overlap 2320513, overlap 2320508 AAGTGAATTAAAAAA GGGAGCC TCT GCCTCCC TTTTGCTATGTTATT TERM 2666 2320529 - 2320513 - T 91 -7.9 -5.29385 | opp_overlap 2320513 2320508 AAGTGAATTAAAAAA GGGAGCC TCT GCCTCCC TTTTGCTATGTTATT Spea_1910 2321049 - 2320555 - | acetolactate synthase, small subunit Spea_1911 2322770 - 2321049 - | acetolactate synthase, large subunit, biosynthetic type TERM 2667 2322923 - 2322937 + r 73 -8.6 -3.76811 | opp_overlap 2322912 2322925, overlap 2322921 AAATTGCTCGGCAAG CACTCA AGA TGAGTG TGTTTTCATCATATA Spea_1912 2324357 - 2323131 - | Bcr/CflA subfamily drug resistance transporter TERM 2668 2325105 - 2325049 - R 100 -16.3 -2.7471 | opp_overlap 2325058 2325065, overlap 2325058 2325065 GATAAAATATAATAT TGCTGAAAATAAAAAACTCCATCACTT TTA AAGTCATGGAGTTTTCTATTTTCATCC TAGCTAAGCACTGAG TERM 2669 2325058 - 2325096 + r 95 -12 -4.3129 | opp_overlap 2325049 2325058 2325065, overlap 2325065 TAATATTGCTGAAAA TAAAAAACTCCATCACTT TTA AAGTCATGGAGTTTTCTA TTTTCATCCTAGCTA TERM 2670 2325096 - 2325058 - R 100 -14.2 -4.11371 | opp_overlap 2325058 2325065, overlap 2325049 2325065 TAATATTGCTGAAAA TAAAAAACTCCATCACTT TTA AAGTCATGGAGTTTTCTA TTTTCATCCTAGCTA TERM 2671 2325065 - 2325089 + r 93 -10.1 -4.91977 | opp_overlap 2325058 2325049 2325065, overlap 2325058 GCTGAAAATAAAAAA CTCCATCACTT TTA AAGTCATGGAG TTTTCTATTTTCATC TERM 2672 2325089 - 2325065 - R 100 -10.1 -5.79595 | opp_overlap 2325065 2325058, overlap 2325058 2325049 GCTGAAAATAAAAAA CTCCATCACTT TTA AAGTCATGGAG TTTTCTATTTTCATC Spea_1913 2325497 - 2325153 - | hypothetical protein TERM 2673 2325282 - 2325294 + g 71 -3.3 -4.89393 | overlap 2325283 CTTAGCGGCAGGTTT AGCTG CAA CAGCC TTTTTCTCGGCTTTA TERM 2674 2326456 - 2326470 + G 70 -5 -4.45485 | TTTAGCCGATAAGTT TGGTGT AAA ACATCA TTTTGTCGATGTAGT Spea_1914 2325746 - 2326498 + | hypothetical protein TERM 2675 2326524 - 2326541 + F 100 -11.3 -5.96894 | opp_overlap 2326524 CAGCTCATAAAAAAA GCCGCTT ATCG AAGCGGC TTTTTTTGTTTGAGT TERM 2676 2326541 - 2326524 - f 100 -11.3 -5.626 | opp_overlap 2326524 CAGCTCATAAAAAAA GCCGCTT ATCG AAGCGGC TTTTTTTGTTTGAGT TERM 2677 2326562 - 2326590 + F 86 -9.8 -3.97947 | gap 1, opp_overlap 2326571 TTGTTTGAGTGTCTT GTCCTGAAATGTG TTTA CACATTT-AGGAC TTTATAATGACTACA Spea_1915 2326597 - 2326995 + | transposase TERM 2678 2327335 - 2327348 + G 72 -6.7 -4.28111 | opp_overlap 2327334 AGTTAGTGCCAACAG CACCT GAAG AGGTG TTTGTTAGTGATATA TERM 2679 2327722 - 2327733 + G 72 -3 -4.9792 | AGTTAAAGCAACTCG TTGA GGAG TCAA TTTTTATATACAATG TERM 2680 2327828 - 2327805 - g 100 -13.2 -5.27923 | opp_overlap 2327807 CAAGTGCATAAAAAA GACCAGCAGC AGAA GCTACTGGTC TAGTAAAAACCGTCA Spea_1916 2327079 - 2327831 + | integrase catalytic region Spea_1917 2329938 - 2327899 - | methionyl-tRNA synthetase Spea_1918 2330099 - 2331214 + | ATP-binding Mrp/Nbp35 family protein Spea_1919 2331226 - 2331861 + | uridine kinase Spea_1920 2331896 - 2332117 + | deoxycytidine triphosphate deaminase Spea_1921 2332117 - 2333019 + | aminodeoxychorismate lyase TERM 2681 2333706 - 2333723 + G 70 -9.9 -3.05596 | CGTCCATGGATCGCG GCGGTTT TTGT AAACCGC TTGCGTAAAGGGATG Spea_1922 2333016 - 2334023 + | aminodeoxychorismate lyase Spea_1923 2334020 - 2334664 + | dTMP kinase TERM 2682 2335202 - 2335225 + G 72 -9 -3.64049 | gap 1, opp_overlap 2335209, overlap 2335206 TAAAGAGCAGTTGAC CACGCAAGATG ACC CATCTTG-GTG TTTACCCGTTGTTGG Spea_1924 2334666 - 2335583 + | DNA polymerase III, delta prime subunit Spea_1925 2335590 - 2335916 + | type IV pilus biogenesis protein PilZ Spea_1926 2335962 - 2336750 + | TatD family hydrolase TERM 2683 2336817 - 2336788 - T 100 -7.9 -6.02914 | TTTAGACAAAAAAAA GACCCAAAACTAT TCCG ATTGTTATGGGTC TAGGGGAATGGCTCA Spea_1927 2338442 - 2336976 - | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 2684 2337207 - 2337230 + g 75 -6.6 -4.42062 | opp_overlap 2337207 2337206 TGACAAAGCTAAAAC GGCTTCATGG CGAA CCTTGTAGCC TTTCTTTAACGCATC TERM 2685 2338621 - 2338637 + G 85 -6.5 -5.09426 | TACTCAAGTGCTCAG TGGCAGT GTC ACCGCCA TTTTTTCAAGTTCAA TERM 2686 2339034 - 2339021 - g 71 -9.5 -3.14344 | opp_overlap 2339014 TACCGTGCTCAGCAA GGCGC AGCA GCGCC AGCGGATATTTTCTT Spea_1928 2338532 - 2339758 + | nucleoside recognition domain-containing protein TERM 2687 2339833 - 2339863 + T 86 -10.7 -3.92522 | gap 1, opp_overlap 2339833 2339840, overlap 2339833 2339840 AGAGTGTAGAGGGAA T-TAAAAACGAGGC CAAA GCCTCGTTTTTACA TTTATAGAATTACCA TERM 2688 2339833 - 2339862 + T 84 -12.3 -2.95192 | opp_overlap 2339833 2339840, overlap 2339833 2339840 AGAGTGTAGAGGGAA TTAAAAACGAGGC CAAA GCCTCGTTTTTAC ATTTATAGAATTACC TERM 2689 2339862 - 2339833 - T 85 -12.3 -3.13177 | opp_overlap 2339833 2339833 2339840, overlap 2339840 AGAGTGTAGAGGGAA TTAAAAACGAGGC CAAA GCCTCGTTTTTAC ATTTATAGAATTACC TERM 2690 2339855 - 2339840 - T 93 -10.4 -4.89009 | opp_overlap 2339840 2339833 2339833, overlap 2339833 AGAGGGAATTAAAAA CGAGGC CAAA GCCTCG TTTTTACATTTATAG TERM 2691 2339840 - 2339855 + T 93 -10.4 -4.84529 | opp_overlap 2339833 2339840, overlap 2339833 2339833 AGAGGGAATTAAAAA CGAGGC CAAA GCCTCG TTTTTACATTTATAG Spea_1929 2342539 - 2339909 - | hypothetical protein TERM 2692 2340261 - 2340271 + g 72 -8.2 -3.73224 | opp_overlap 2340260 2340261, overlap 2340269 CCTCTAAAGAAAATG GCCG TCC CGGC TTTGATAGAGCCTAA Spea_1930 2343158 - 2342517 - | paraquat-inducible protein A TERM 2693 2342716 - 2342702 - G 81 -8.6 -4.53034 | GTGAGATAACGAAAA GGTCAA GCA TTGACC AGCGTCCTATCCATT Spea_1931 2343777 - 2343148 - | paraquat-inducible protein A Spea_1932 2343962 - 2344252 + | YebG family protein TERM 2694 2344583 - 2344599 + G 74 -10.9 -2.78266 | opp_overlap 2344582 2344583, overlap 2344579 2344588 2344596 GCGGTAGCAACTAAC TCGACTC AGC GAGTCGA TGATGTTCATCAATT TERM 2695 2344599 - 2344583 - g 73 -10.9 -2.63723 | opp_overlap 2344583 2344579 2344588 2344596, overlap 2344582 GCGGTAGCAACTAAC TCGACTC AGC GAGTCGA TGATGTTCATCAATT Spea_1933 2344337 - 2344795 + | putative GAF sensor protein TERM 2696 2345618 - 2345632 + G 70 -10 -3.09004 | opp_overlap 2345611 2345618 2345617 2345620, overlap 2345620 TCAAATTAGGTAAAG CACCAG TTG CTGGTG TGATTTTGGACATCA Spea_1934 2345083 - 2345721 + | putative solute/DNA competence effector Spea_1935 2345755 - 2347800 + | carboxy-terminal protease TERM 2697 2347839 - 2347815 - f 77 -8.6 -3.80622 | opp_overlap 2347820, overlap 2347820 ATATAAAGTTAATAA GAAAACGCGC TTAAT GCGCGTTTTT TTTAATCCAAAATTA TERM 2698 2347834 - 2347820 - f 90 -8.5 -4.91987 | opp_overlap 2347820, overlap 2347815 AAGTTAATAAGAAAA CGCGC TTAAT GCGCG TTTTTTTTAATCCAA TERM 2699 2347820 - 2347834 + F 100 -8.5 -5.86061 | opp_overlap 2347820 2347815 AAGTTAATAAGAAAA CGCGC TTAAT GCGCG TTTTTTTTAATCCAA TERM 2700 2348930 - 2348916 - g 80 -6.4 -4.90013 | overlap 2348917 TAAGGTAATGAAAAA CCAGCA GTT TGCTGA GGATTCTGGCCCGAT TERM 2701 2349036 - 2349082 + G 71 -9.7 -3.24232 | gap 2, opp_overlap 2349035 2349038, overlap 2349034 CGAAGTTATTAGAAT GATGCATACCTTGCTTGGAGAAG CGG CTT-TCCA-GCAAGGTATGAAGC TGTATTTCGAACGCC TERM 2702 2349080 - 2349038 - g 74 -10.9 -2.87014 | gap 2, opp_overlap 2349036 2349034, overlap 2349035 AAGTTATTAGAATGA TGCATACCTTGCTTGGAGAAG CGG CTT-TCCA-GCAAGGTATGAA GCTGTATTTCGAACG Spea_1936 2347873 - 2350434 + | aminopeptidase N Spea_1937 2350522 - 2350752 + | hypothetical protein Spea_1938 2351070 - 2353118 + | hypothetical protein Spea_1939 2353138 - 2354502 + | hypothetical protein TERM 2703 2354510 - 2354536 + F 78 -2.9 -5.40474 | gap 1, opp_overlap 2354504, overlap 2354514 TTCGTTAAACCCACT TG-TTGAGGGGC TCGG GCCCCTCTTTCA TTTTTTTAAGGAAGT TERM 2704 2354514 - 2354531 + F 100 -12.7 -4.5187 | opp_overlap 2354504, overlap 2354510 TTAAACCCACTTGTT GAGGGGC TCGG GCCCCTC TTTCATTTTTTTAAG Spea_1940 2354556 - 2355572 + | BNR repeat-containing protein Spea_1941 2355585 - 2357888 + | Patched family protein TERM 2705 2357900 - 2357917 + F 100 -9.1 -5.64274 | opp_overlap 2357900 GTAGAATCAACGAAA GGGGAGC ATTA GCTCCTC TTTTTTTATGAATAA TERM 2706 2357917 - 2357900 - f 71 -6.9 -4.02535 | opp_overlap 2357900 GTAGAATCAACGAAA GGGGAGC ATTA GCTCCTC TTTTTTTATGAATAA TERM 2707 2362962 - 2362991 + G 76 -11.7 -2.70143 | gap 1, opp_overlap 2362961, overlap 2362958 TTACGTGAACTTAAT CTTTTGATCCTTCA TTG TGAAGG-TCAAAAG TAATCTGATTAAAAT Spea_1942 2358150 - 2362994 + | NAD-glutamate dehydrogenase TERM 2708 2363012 - 2363031 + F 100 -12.8 -5.1287 | opp_overlap 2363009 TGATTAAAATCAGCA GCCCTGGC AATT GCCGGGGC TTTTTTCGGTCTAGG TERM 2709 2363327 - 2363303 - g 71 -9.9 -3.12351 | TTTGGTCATATTGAA GTGGGCACGGT TAC ACCACGCCCTC AACCAGGTAATGAAC Spea_1943 2363054 - 2364073 + | dihydroorotate dehydrogenase 2 TERM 2710 2364150 - 2364106 - f 81 -11.7 -2.65264 | opp_overlap 2364111 2364149, overlap 2364111 TTATTATTTAGAGCA TAAAACGATCATTGGGATC TTAATTG GATCGCAATGATCGTTTTT ATTTAATAATTCTAA TERM 2711 2364145 - 2364111 - f 93 -11.6 -4.51378 | opp_overlap 2364111, overlap 2364106 ATTTAGAGCATAAAA CGATCATTGGGATC TTAATTG GATCGCAATGATCG TTTTTATTTAATAAT TERM 2712 2364111 - 2364145 + F 100 -12.3 -5.34309 | opp_overlap 2364106 2364111 ATTTAGAGCATAAAA CGATCATTGGGATCT TAATT GGATCGCAATGATCG TTTTTATTTAATAAT Spea_1944 2364247 - 2364786 + | hypothetical protein Spea_1945 2365708 - 2365103 - | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 2713 2366126 - 2366113 - H 100 -8.1 -5.76633 | TCAGATACAAAAAAA CCAGC TTTC GCTGG CCTACATATAAACTT TERM 2714 2368174 - 2368154 - g 73 -9.7 -3.41195 | opp_overlap 2368150 AATATCAAAATTGAA GGCGATGTC AGC GATATCGCC GTGCCGTTTGCTAAC Spea_1946 2366975 - 2369110 + | 23S rRNA m(2)G2445 methyltransferase Spea_1947 2369100 - 2369336 + | glutaredoxin 2 TERM 2715 2370666 - 2370653 - g 72 -8.1 -3.7282 | opp_overlap 2370652 CTATGCGAGCAAGAA CGCCT GTTA AGGCG CTGTCTGGCGGTGAA Spea_1948 2369338 - 2371275 + | ABC transporter ATPase component Spea_1949 2371305 - 2373161 + | hypothetical protein TERM 2716 2373189 - 2373207 + F 100 -11 -5.53288 | opp_overlap 2373189 TGTAAAAGAATTGAA TCGAGGCT AAT GGCCTCGA TTTTTTTGAATTAAA TERM 2717 2373207 - 2373189 - f 77 -10.3 -3.37556 | opp_overlap 2373189 TGTAAAAGAATTGAA TCGAGGC TAATG GCCTCGA TTTTTTTGAATTAAA TERM 2718 2373316 - 2373329 + F 84 -6.7 -4.84311 | ATTATTTATGGAGGT GAAGC GTTA GCTTC TTTTGTTATCTCAGA Spea_1950 2373357 - 2373533 + | ribosome modulation factor TERM 2719 2373611 - 2373631 + T 95 -11.2 -5.09204 | opp_overlap 2373609 ATTGAGAAACAATTT TGCCCTCT ATCAA AGAGGGCA TTTTTATTGCGGTAT Spea_1951 2374183 - 2373668 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 2720 2373798 - 2373814 + g 81 -5.1 -5.15969 | ACTTTACGCTTAATG GTCAGCT TGT AGGTGAC TTTTTTAGCTTCAGG Spea_1952 2375963 - 2374251 - | peptidase S16 lon domain-containing protein TERM 2721 2374278 - 2374296 + g 84 -7.5 -4.73613 | TCTCAATTTATCGAC GAGTCTT GCAAA AAGACTC TTTTCTTCGTCCTGA TERM 2722 2374955 - 2374965 + g 71 -6.8 -4.03234 | CAGCATTTTCTATTA CGGT TAA ACCG TTTATCTGGCCAACA TERM 2723 2375026 - 2375049 + g 70 -9 -3.31461 | gap 1, overlap 2375029 AGATCATTAAAGTTC TGC-TCAGAGA GTC TCTCTGATGCA TTGTGGCGCTGGGTA TERM 2724 2376320 - 2376338 + H 100 -12.4 -4.83759 | opp_overlap 2376320 GCCACATTTAGAAAA GGCAGCCT ATA GGGCTGCC TTTTTGCATTTACTT TERM 2725 2376338 - 2376320 - H 95 -11.7 -4.45083 | opp_overlap 2376320 GCCACATTTAGAAAA GGCAGCC TATAG GGCTGCC TTTTTGCATTTACTT Spea_1953 2376525 - 2377169 + | response regulator Spea_1954 2377189 - 2379018 + | excinuclease ABC subunit C TERM 2726 2379101 - 2379120 + G 75 -2.8 -5.25772 | gap 1 TGCGTTAACACTTTT CAGGTTAGC TCT GCTT-CCTG TTTTTGTTGTACTTT Spea_1955 2379066 - 2379614 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 2727 2379638 - 2379628 - f 70 -5.4 -4.40963 | opp_overlap 2379636, overlap 2379636 AGCTCGTAAAAACAA CGAT GAG ATCG ATAAGTAGTCAAACA TERM 2728 2380060 - 2380040 - f 73 -10.5 -2.89742 | overlap 2380043 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGAATAAGCGTGCC TERM 2729 2380057 - 2380043 - f 72 -8.6 -3.5947 | overlap 2380040 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGAATAAGCGT TERM 2730 2380125 - 2380140 + F 91 -6.1 -5.42259 | opp_overlap 2380125 2380116 TGAAGAGTGACTAAA CCAGC CATCGA GCTGG TTTTTTTACGCCTAA TERM 2731 2380273 - 2380288 + F 91 -6.1 -5.50499 | opp_overlap 2380273 TGAAGAGTGACTAAA CCAGC CATCGA GCTGG TTTTTTTACGTCTAA TERM 2732 2380417 - 2380449 + F 100 -15.7 -2.94194 | opp_overlap 2380424, overlap 2380424 TCTCTTGTAGAGTTG CAGAGAAGCCTCGAC ACT GTCGGGGCTTTTTTG TATCTAAAGTTTATG TERM 2733 2380442 - 2380424 - f 79 -10.2 -3.49951 | opp_overlap 2380417 2380424 TAGAGTTGCAGAGAA GCCTCGAC ACT GTCGGGGC TTTTTTGTATCTAAA TERM 2734 2380424 - 2380442 + F 100 -12.4 -5.4251 | opp_overlap 2380424, overlap 2380417 TAGAGTTGCAGAGAA GCCTCGAC ACT GTCGGGGC TTTTTTGTATCTAAA Spea_1956 2380631 - 2381200 + | hypothetical protein TERM 2735 2381230 - 2381260 + F 77 -7.7 -4.19678 | opp_overlap 2381232, overlap 2381232 TTTAAAGTTAAGTAA AATCAAGCTACTA AAATG TAGTGGCTTGATA TTTGTTAACATATCA TERM 2736 2381232 - 2381258 + F 80 -10.3 -3.69469 | opp_overlap 2381232, overlap 2381230 TAAAGTTAAGTAAAA TCAAGCTACTA AAATG TAGTGGCTTGA TATTTGTTAACATAT TERM 2737 2381258 - 2381232 - f 80 -8.1 -4.47271 | opp_overlap 2381230 2381232 TAAAGTTAAGTAAAA TCAAGCTACTA AAATG TAGTGGCTTGA TATTTGTTAACATAT Spea_1957 2381364 - 2382719 + | peptidoglycan binding domain-containing protein Spea_1958 2382849 - 2383397 + | hypothetical protein Spea_1959 2383547 - 2383834 + | ribosomal protein L25 TERM 2738 2383873 - 2383857 - T 100 -12.3 -5.07567 | opp_overlap 2383857 GTAGATTTGAAAAAA GCGCCTA TAA TAGGCGC TTTTTTTATGTCTGC TERM 2739 2383857 - 2383873 + T 100 -12.3 -5.76633 | opp_overlap 2383857 GTAGATTTGAAAAAA GCGCCTA TAA TAGGCGC TTTTTTTATGTCTGC Spea_1960 2385424 - 2383910 - | hypothetical protein TERM 2740 2384686 - 2384711 + g 76 -4.8 -4.84492 | GCTCAAGTAGTGGTG CATTCTTTTC GATAAA GTAAAGAATG TTTTCTTGTGGTTCA Spea_1961 2386702 - 2385434 - | hypothetical protein TERM 2741 2386725 - 2386743 + r 73 -8.8 -3.74347 | opp_overlap 2386726 2386727, overlap 2386715 2386726 TCCTAGCCAAATAGA AGGGGAGA GGA TCTCCCCC TTTGGGCTTTCTAAG TERM 2742 2386726 - 2386742 + r 83 -12.3 -2.84126 | opp_overlap 2386726 2386727, overlap 2386725 2386715 CCTAGCCAAATAGAA GGGGAGA GGA TCTCCCC CTTTGGGCTTTCTAA TERM 2743 2386742 - 2386726 - R 93 -12.3 -3.84185 | opp_overlap 2386726 2386725 2386715, overlap 2386727 CCTAGCCAAATAGAA GGGGAGA GGA TCTCCCC CTTTGGGCTTTCTAA TERM 2744 2386743 - 2386727 - R 73 -10.1 -2.90029 | opp_overlap 2386726 2386725 2386715, overlap 2386726 CTAGCCAAATAGAAG GGGAGAG GAT CTCCCCC TTTGGGCTTTCTAAG Spea_1962 2388688 - 2386754 - | putative serine protein kinase, PrkA TERM 2745 2388867 - 2388896 + r 84 -7.9 -4.6856 | opp_overlap 2388874, overlap 2388874 ATTAGAAAAATATAA TAAAAAAGGAGCC ATAA GGCTCCTTGTTAA TTTTTGCGGTATTTA TERM 2746 2388889 - 2388874 - R 100 -10.4 -5.66338 | opp_overlap 2388874 2388867 AAATATAATAAAAAA GGAGCC ATAA GGCTCC TTGTTAATTTTTGCG TERM 2747 2388874 - 2388889 + r 86 -10.4 -4.0257 | opp_overlap 2388874, overlap 2388867 AAATATAATAAAAAA GGAGCC ATAA GGCTCC TTGTTAATTTTTGCG Spea_1963 2389500 - 2388916 - | superoxide dismutase Spea_1964 2389726 - 2390067 + | glutaredoxin-like protein TERM 2748 2390127 - 2390102 - T 100 -17.7 -5.10461 | opp_overlap 2390102 TTTAGCGAATAAAAA GCCCCTATTGG TTTA CCAATAGGGGC TTTTTTTAGGTATAT TERM 2749 2390102 - 2390127 + T 100 -17.7 -5.51402 | opp_overlap 2390102 TTTAGCGAATAAAAA GCCCCTATTGG TTTA CCAATAGGGGC TTTTTTTAGGTATAT Spea_1965 2391434 - 2390178 - | uracil-xanthine permease TERM 2750 2392288 - 2392260 - g 74 -11.1 -2.83715 | overlap 2392285 2392286 TGTACCACTACCAGA TGGGTCTTTATCC TAG AGATAAAGACCCG CAAGCGCTGCAGATG Spea_1966 2391611 - 2392723 + | hypothetical protein TERM 2751 2392762 - 2392735 - f 83 -12.8 -2.53015 | opp_overlap 2392737 ATAGCTCCCAATCGA GAGGCACACATG CTAC CATGTGTGCCTA ATATAGAAATATAGC TERM 2752 2392737 - 2392760 + F 95 -15.4 -2.63301 | opp_overlap 2392735 AGCTCCCAATCGAGA GGCACACATG CTAC CATGTGTGCC TAATATAGAAATATA Spea_1967 2392797 - 2393507 + | DNA replication initiation factor TERM 2753 2393539 - 2393558 + T 95 -12.2 -4.41177 | opp_overlap 2393539 AGCACAAACTAAAAA GCCCAGAT CTGC ATCTGGGC TTTTACGTTTCTATA TERM 2754 2393558 - 2393539 - T 100 -12.2 -5.05505 | opp_overlap 2393539 AGCACAAACTAAAAA GCCCAGAT CTGC ATCTGGGC TTTTACGTTTCTATA Spea_1968 2395546 - 2393609 - | hypothetical protein TERM 2755 2394056 - 2394068 + g 76 -7.7 -4.29845 | ACTACTGATATCGGC GGCAT TGT ATGCC TTTTGGGTTCCATTA Spea_1969 2396090 - 2395719 - | hypothetical protein Spea_1970 2396453 - 2396103 - | arsenate reductase Spea_1971 2397987 - 2396527 - | peptidase M48 Ste24p TERM 2756 2397723 - 2397706 - G 85 -5.7 -5.29445 | overlap 2397713 TCTTAATAAGAAAAA GTAAAAA GGGG TTTTTAC ACCTGTAGCATGGGC TERM 2757 2397726 - 2397713 - G 73 -2.3 -5.24003 | overlap 2397706 AAGAAAAAGTAAAAA GGGGT TTTT ACACC TGTAGCATGGGCAAC TERM 2758 2398232 - 2398253 + G 78 -5.1 -4.91511 | CTAGGCAAGATGTTC CCCGTTATT TGAA AAAAGCGGG TTTTTGTCATGCAGT Spea_1972 2398099 - 2398314 + | SirA family protein Spea_1973 2398405 - 2399514 + | hypothetical protein TERM 2759 2399530 - 2399556 + T 81 -7.4 -4.59773 | opp_overlap 2399536, overlap 2399535 2399536 ACTAGTTTCACTCAG TAGAAAGGGG CTAGTGC CCCCTTTTTA TTTTTAGCCCTAAAC TERM 2760 2399535 - 2399550 + T 95 -6 -5.61881 | opp_overlap 2399536, overlap 2399530 2399536 TTTCACTCAGTAGAA AGGGGC TAGT GCCCCC TTTTTATTTTTAGCC TERM 2761 2399536 - 2399549 + T 83 -9.5 -3.95502 | opp_overlap 2399536, overlap 2399535 2399530 TTCACTCAGTAGAAA GGGGC TAGT GCCCC CTTTTTATTTTTAGC TERM 2762 2399549 - 2399536 - T 86 -9.5 -3.97947 | opp_overlap 2399535 2399530 2399536 TTCACTCAGTAGAAA GGGGC TAGT GCCCC CTTTTTATTTTTAGC TERM 2763 2399945 - 2399931 - T 73 -10 -2.84602 | opp_overlap 2399930 2399928 2399931, overlap 2399930 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTATTTTGTAACAC TERM 2764 2399931 - 2399945 + T 79 -10 -3.48115 | opp_overlap 2399931 2399930, overlap 2399930 2399928 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTATTTTGTAACAC Spea_1974 2400900 - 2400010 - | chromosome replication initiation inhibitor protein Spea_1975 2401029 - 2401643 + | lysine exporter protein LysE/YggA TERM 2765 2401664 - 2401649 - f 100 -10.4 -5.60993 | opp_overlap 2401649 TGTTGGATAAAAAAA GGAGCC AATT GGCTCC TTTTTTCGATCAAGG TERM 2766 2401649 - 2401664 + F 93 -10.4 -5.08824 | opp_overlap 2401649 TGTTGGATAAAAAAA GGAGCC AATT GGCTCC TTTTTTCGATCAAGG TERM 2767 2402107 - 2402074 - g 83 -2.4 -5.64274 | overlap 2402075 CGATTTAGAAAAAAA GTACTTAGCCGAAC GCTCTG GTTCGCCAAAGTAA AAGGCACCATAAAGT Spea_1976 2401724 - 2402107 + | transposase TERM 2768 2402926 - 2402948 + G 71 -9.8 -3.14344 | opp_overlap 2402926 GAAGTACATAAAAAA GCCAGTCGGG AGT TCCAACTGGC TTAATAAAAACCGTC TERM 2769 2402948 - 2402926 - g 100 -11.3 -5.42131 | opp_overlap 2402926 GAAGTACATAAAAAA GCCAGTCGG GAGTT CCAACTGGC TTAATAAAAACCGTC Spea_1977 2402224 - 2402952 + | integrase catalytic region Spea_1978 2403455 - 2402985 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Spea_1979 2404012 - 2403476 - | amino acid-binding ACT domain-containing protein TERM 2770 2403670 - 2403692 + g 73 -4.1 -4.77036 | CGAGGTCTAAGGAGC GGTCAGCCA AGAAC TGGGTGATC TTTTTCATCGTGCCA TERM 2771 2403930 - 2403898 - G 72 -5 -4.7254 | gap 2, overlap 2403921 ATTCGTTACCAAAAA GTGCCATGCGACTATC AAC GATA-TCGCA-GTCAC ACTCACTCGCGAGTC Spea_1980 2404254 - 2405138 + | dihydrodipicolinate synthase Spea_1981 2405142 - 2406239 + | NlpB/DapX family lipoprotein TERM 2772 2406280 - 2406254 - f 100 -12.4 -4.74132 | opp_overlap 2406260, overlap 2406260 ACACGTGACGAAAAA TAAAAAGGAGCC TTA GGCTCCTTTTTT GTTTTCAGCCCTAAA TERM 2773 2406260 - 2406274 + F 100 -11.4 -5.79595 | opp_overlap 2406254 2406260 GACGAAAAATAAAAA GGAGCC TTA GGCTCC TTTTTTGTTTTCAGC TERM 2774 2406274 - 2406260 - f 100 -11.4 -5.65496 | opp_overlap 2406260, overlap 2406254 GACGAAAAATAAAAA GGAGCC TTA GGCTCC TTTTTTGTTTTCAGC TERM 2775 2406641 - 2406659 + G 72 -6.6 -4.32857 | overlap 2406643 TATTCCTTACTTTGC TTGGTGCC GTC GGCGCCTA TTTCTATTTACAACA TERM 2776 2406643 - 2406657 + G 76 -9.2 -3.76586 | overlap 2406641 TTCCTTACTTTGCTT GGTGCC GTC GGCGCC TATTTCTATTTACAA TERM 2777 2407274 - 2407244 - g 100 -10.5 -4.78107 | gap 1 TAGCATTAGGAAAAA CCGTCGAA-GCGAC CGCT GTGGCATTCGACGG GGAGATATTTAACGG Spea_1982 2406610 - 2407692 + | RND family efflux transporter MFP subunit Spea_1983 2407689 - 2410793 + | acriflavin resistance protein TERM 2778 2410839 - 2410813 - T 73 -9.5 -3.12283 | opp_overlap 2410819, overlap 2410819 CAATGGATGTAAAAG TAAAAAGGCGC AGACA GCGCCTTTTTT ATGGATGATTCACTG TERM 2779 2410833 - 2410819 - T 90 -8.5 -5.10154 | opp_overlap 2410819, overlap 2410813 ATGTAAAAGTAAAAA GGCGC AGACA GCGCC TTTTTTATGGATGAT TERM 2780 2410819 - 2410833 + T 93 -8.5 -5.28778 | opp_overlap 2410819 2410813 ATGTAAAAGTAAAAA GGCGC AGACA GCGCC TTTTTTATGGATGAT Spea_1984 2411099 - 2410860 - | hypothetical protein Spea_1985 2411850 - 2411113 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 2781 2411878 - 2411898 + r 82 -6.1 -4.89852 | opp_overlap 2411878, overlap 2411880 CTTAAGAAAATATCA TGGGCCTTA AGA TGAAGCCCA TTTTTATGCCTATGC TERM 2782 2412791 - 2412822 + r 100 -15.3 -3.22656 | opp_overlap 2412791 AGCATGATGAGAAAA GGGCTAGTTCAGT ACAATG ACTGAGCTAGCCC TTAATAAGTTGCATT TERM 2783 2412822 - 2412791 - R 100 -13.1 -4.49311 | opp_overlap 2412791 AGCATGATGAGAAAA GGGCTAGTTCAGT ACAATG ACTGAGCTAGCCC TTAATAAGTTGCATT TERM 2784 2412845 - 2412858 + r 73 -2.4 -5.2853 | opp_overlap 2412845 GTTGCATTGAGTTAA TAGC GTCTTA GCTA TTTTCTTTTTCCGTA Spea_1988 2413466 - 2412852 - | carbonate dehydratase Spea_1989 2414565 - 2413711 - | alpha/beta hydrolase fold TERM 2785 2413975 - 2413996 + g 73 -2.3 -5.10461 | gap 1, opp_overlap 2413989 2413991, overlap 2413990 AAGGGTGTCGACGTT GCTGCTATCA AAA TGATTG-AGC TTTTTCTTGAATAGC Spea_1990 2415192 - 2414614 - | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin TERM 2786 2415148 - 2415118 - G 78 -12.1 -2.98942 | gap 1, opp_overlap 2415108, overlap 2415144 AGCGTTCCAGATAGA CTGCTGCTTATCGA AGTC TCGATAAGCAG-AG CAGATCTGAATATTG Spea_1991 2416430 - 2415285 - | succinyl-diaminopimelate desuccinylase TERM 2787 2415874 - 2415891 + g 78 -4.7 -5.07567 | opp_overlap 2415868, overlap 2415875 GTTAAGTTACCGGTG AGGCTGC CTCG GCGGCCA TTTTTTACAATATCA Spea_1992 2416807 - 2416427 - | arsenate reductase and related Spea_1993 2417451 - 2416942 - | glucose-specific PTS system component Spea_1994 2419219 - 2417516 - | phosphoenolpyruvate-protein phosphotransferase Spea_1995 2419502 - 2419230 - | phosphotransferase system, phosphocarrier protein HPr Spea_1996 2419953 - 2419567 - | hypothetical protein Spea_1997 2421695 - 2420055 - | methyl-accepting chemotaxis sensory transducer TERM 2788 2422735 - 2422725 - g 79 -4.6 -5.1101 | overlap 2422708 TCACCATGTAAAAAA CAGC GAT GCCG ATGATCTACTCGATG Spea_1998 2422060 - 2422764 + | hypothetical protein Spea_1999 2423559 - 2422912 - | DNA polymerase III, epsilon subunit Spea_2000 2423747 - 2424892 + | cupin 4 family protein TERM 2789 2424964 - 2424989 + T 100 -9.9 -5.66338 | gap 1, opp_overlap 2424964 TAATTGAAGATTAAA GCTCAATAGTCT TAA AG-CTATTGAGC TTTTTTATTGTGTTT TERM 2790 2424989 - 2424964 - T 83 -9.9 -3.94853 | gap 1, opp_overlap 2424964 TAATTGAAGATTAAA GCTCAATAGTCT TAA AG-CTATTGAGC TTTTTTATTGTGTTT Spea_2001 2425956 - 2425066 - | hypothetical protein Spea_2002 2426244 - 2426756 + | GreA/GreB family elongation factor Spea_2003 2426831 - 2427190 + | hypothetical protein TERM 2791 2427207 - 2427228 + T 95 -11.7 -4.44548 | opp_overlap 2427195 2427209 2427212 AATCACGTTGTTTAA GATAAGCAG CATG CTGCTTATC TTTTGATTACCTCTA Spea_2004 2428826 - 2427291 - | XRE family transcriptional regulator Spea_2005 2428976 - 2429491 + | malate synthase TERM 2792 2429525 - 2429493 - f 79 -8.4 -4.01411 | opp_overlap 2429499, overlap 2429494 2429496 TACTAAAAAGTTAAA TGATGATGCCGCTA GATAA TAGCGGCATCTCCT CACTGATTGCTAGTC TERM 2793 2429524 - 2429494 - f 82 -11.9 -2.99762 | opp_overlap 2429499, overlap 2429493 2429496 ACTAAAAAGTTAAAT GATGATGCCGCTA GATAA TAGCGGCATCTCC TCACTGATTGCTAGT TERM 2794 2429522 - 2429496 - f 78 -10.9 -3.03811 | opp_overlap 2429499, overlap 2429494 2429493 TAAAAAGTTAAATGA TGATGCCGCTA GATAA TAGCGGCATCT CCTCACTGATTGCTA TERM 2795 2429499 - 2429519 + F 80 -11.2 -2.8194 | opp_overlap 2429496 2429494 2429493 AAAGTTAAATGATGA TGCCGCTA GATAA TAGCGGCA TCTCCTCACTGATTG Spea_2006 2429824 - 2431041 + | Fmu (Sun) domain-containing protein TERM 2796 2431093 - 2431065 - T 91 -13.3 -3.22943 | opp_overlap 2431071, overlap 2431071 TAGAAATAGATTGAA TAAAAAGAGCACC TTA GGTGCTCTTTTTT GTACTCAAATAGGGC TERM 2797 2431087 - 2431071 - T 100 -12.3 -5.12068 | opp_overlap 2431071, overlap 2431065 TAGATTGAATAAAAA GAGCACC TTA GGTGCTC TTTTTTGTACTCAAA TERM 2798 2431071 - 2431087 + T 100 -12.3 -5.31275 | opp_overlap 2431065 2431071 TAGATTGAATAAAAA GAGCACC TTA GGTGCTC TTTTTTGTACTCAAA Spea_2007 2433208 - 2431160 - | sulfatase TERM 2799 2431219 - 2431197 - G 78 -6.2 -4.62336 | overlap 2431200 ATCTGATTGCAAAAA GAGCCAGGAT CAA ACCCCGGATC TCCCTTGTATCGATT TERM 2800 2432890 - 2432914 + g 72 -5.1 -4.72007 | opp_overlap 2432888 2432892 2432896, overlap 2432892 ATATAAGTAATAACC AATAAACATCG GAT TGATGTTTATC TTTATTTTGGTACCA TERM 2801 2432892 - 2432912 + g 71 -7.7 -3.97149 | opp_overlap 2432888 2432892 2432896, overlap 2432890 ATAAGTAATAACCAA TAAACATCG GAT TGATGTTTA TCTTTATTTTGGTAC Spea_2008 2433784 - 2435088 + | peptidoglycan binding domain-containing protein Spea_2009 2435098 - 2435499 + | transposase and inactivated derivative TERM 2802 2436279 - 2436254 - f 79 -9.1 -3.82499 | opp_overlap 2436254 ATCAAAGGGATTAAA GATTACTCATC TTAA GGTGAGTAATC TTCTGTTGCAAGTTT TERM 2803 2436254 - 2436279 + F 88 -11.3 -3.679 | opp_overlap 2436254 ATCAAAGGGATTAAA GATTACTCATC TTAA GGTGAGTAATC TTCTGTTGCAAGTTT Spea_2010 2436305 - 2436871 + | peptidase A24A prepilin type IV Spea_2011 2436882 - 2438204 + | AAA ATPase Spea_2012 2438231 - 2439049 + | SAF domain-containing protein Spea_2013 2439095 - 2440531 + | type II and III secretion system protein Spea_2014 2440615 - 2440860 + | hypothetical protein TERM 2804 2441825 - 2441837 + G 73 -4.1 -4.78107 | CAAGCTAAAGATAGT GAAGG CAA TCTTC TTTTTGATGATAATG Spea_2015 2440901 - 2442238 + | hypothetical protein Spea_2016 2442249 - 2442731 + | TadE family protein Spea_2017 2442728 - 2443183 + | TadE family protein Spea_2018 2443277 - 2444503 + | Flp pilus assembly protein ATPase CpaE-like protein Spea_2019 2444505 - 2445833 + | type II secretion system protein E Spea_2020 2445845 - 2446822 + | type II secretion system protein TERM 2805 2447655 - 2447643 - g 73 -7.7 -4.07285 | TACCGAAACAAAAGA CTGCA AGC TGCAG AAGAGCAAGCGGCTA Spea_2021 2446824 - 2447786 + | type II secretion system protein TERM 2806 2447963 - 2447952 - g 74 -7.2 -4.35461 | opp_overlap 2447960 CTAACACCAGTAAAA GCGC CTGA GCGC CAAGATTTACTTGAT Spea_2022 2447811 - 2448866 + | TPR repeat-containing protein TERM 2807 2448944 - 2448923 - T 83 -12.3 -2.53345 | opp_overlap 2448920 2448917, overlap 2448922 2448920 TTGAGATATTAATAT GCCCTACCC TTAA GAGTAGGGC TAATCATTTCGAGCC Spea_2023 2449309 - 2448962 - | hydrogenase expression/synthesis HypA Spea_2024 2450325 - 2449309 - | hydrogenase expression/formation protein HypE Spea_2025 2451443 - 2450325 - | hydrogenase expression/formation protein HypD TERM 2808 2450537 - 2450525 - G 76 -4.8 -4.78764 | opp_overlap 2450525 GAAACTCAGCAAAAA GACG TTCGG CGTC TCTATGAGCATATTT Spea_2026 2451691 - 2451443 - | hydrogenase assembly chaperone hypC/hupF Spea_2027 2452452 - 2451691 - | hydrogenase accessory protein HypB TERM 2809 2451875 - 2451849 - G 70 -10.3 -2.54566 | overlap 2451848 2451846 2451851 2451872 AATAGGGCATAAGAT CAGACTTAGTG ATCAG CACTAAATCTG CACGGCGGAACATGA Spea_2028 2454954 - 2452552 - | (NiFe) hydrogenase maturation protein HypF TERM 2810 2453815 - 2453777 - G 79 -9.7 -3.71745 | gap 1, opp_overlap 2453775 2453770, overlap 2453775 CAACCATTCAAAATA GGCCGATCGTGATCGAGA ATAT TGTCGATCAC-ATGGGCC AGTTTAGTCTTGATG Spea_2029 2456736 - 2454973 - | hypothetical protein Spea_2030 2457280 - 2456723 - | hydrogenase expression/formation protein TERM 2811 2457139 - 2457194 + g 72 -4.8 -4.70169 | gap 1, overlap 2457142 2457143 GAATAAGACCTTGGG CAAGCG-TTCCACCATCAAGCAGATCA AGT TGATGGGTTTGATGATGGAAGCGGTAG TTTTCTTGGATGTAA TERM 2812 2457246 - 2457219 - G 100 -18.6 -3.79668 | ATGTAATTGACGAAA TGTACGCCGATG CCCT CATCGGCGTACA GGACATTGCCAATAC Spea_2031 2457958 - 2457290 - | Ni/Fe-hydrogenase, b-type cytochrome subunit TERM 2813 2457892 - 2457874 - G 77 -11.8 -2.87243 | TTACCAGTACAAGTA TGGCTAAG GCT CTTAGCCA GTGAAATATCCTTAT Spea_2032 2459676 - 2457973 - | nickel-dependent hydrogenase large subunit TERM 2814 2459410 - 2459440 + g 79 -7.6 -4.40572 | GCTTCTAAGGTATTT TGCATTGAGTGGAA TTT TTACGCCCAATGCA TTTTCTACCGCTTCT Spea_2033 2460815 - 2459679 - | hydrogenase (NiFe) small subunit HydA TERM 2815 2460132 - 2460147 + g 72 -3.2 -4.92314 | opp_overlap 2460129 2460127 2460119, overlap 2460123 CATGATGAAATACAT CAGCGT GCCG ACGATG TTTTTCTCACTTGGT TERM 2816 2460323 - 2460335 + g 72 -9.1 -3.53091 | opp_overlap 2460319 CTTTAATGATATGCA GGCCA GTA TGGCC TTTACAGCCCACCGT TERM 2817 2461178 - 2461201 + r 91 -9.6 -4.60258 | opp_overlap 2461178 ATGCTTAATAAAAAA GCCTCTGACA TAAA TGTGAGAGGC TTTATTGTTTAATCG TERM 2818 2461201 - 2461178 - R 100 -9.6 -5.45652 | opp_overlap 2461178 ATGCTTAATAAAAAA GCCTCTGACA TAAA TGTGAGAGGC TTTATTGTTTAATCG Spea_2034 2462638 - 2461238 - | asparaginyl-tRNA synthetase Spea_2035 2462838 - 2463125 + | hypothetical protein Spea_2036 2463757 - 2463164 - | NUDIX hydrolase Spea_2037 2465277 - 2463805 - | para-aminobenzoate synthase, subunit I Spea_2038 2465456 - 2466976 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 2819 2467102 - 2467126 + F 95 -11.5 -4.6951 | opp_overlap 2467101, overlap 2467123 AAATAGCGTTAACAG TGGCTTAGGCG TAT TGCTTAAGCCA TTTATTTTGGCTAAT Spea_2039 2467255 - 2469306 + | peptidase S9 prolyl oligopeptidase TERM 2820 2469344 - 2469363 + T 100 -12.2 -5.75342 | opp_overlap 2469344 CGGCATAAATTGAAA GCCAGAAC TTAA GTTCTGGC TTTTTTTTGCGAAAA TERM 2821 2469363 - 2469344 - T 91 -12.2 -3.89215 | opp_overlap 2469344 CGGCATAAATTGAAA GCCAGAAC TTAA GTTCTGGC TTTTTTTTGCGAAAA Spea_2040 2470050 - 2469484 - | hypothetical protein TERM 2822 2470426 - 2470408 - R 100 -10.3 -5.27335 | opp_overlap 2470408 TCCGGGAAATAAAAA GGCCTAC AAAGA GTAGGCC TTAAGTTATTAGCTC TERM 2823 2470408 - 2470426 + r 77 -10.3 -3.29459 | opp_overlap 2470408 TCCGGGAAATAAAAA GGCCTAC AAAGA GTAGGCC TTAAGTTATTAGCTC Spea_2041 2472074 - 2470491 - | isocitrate lyase Spea_2042 2472185 - 2473129 + | LysR family transcriptional regulator TERM 2824 2474763 - 2474773 + G 71 -6.8 -4.16284 | TTCATACTTCTATGC TGGC TGG GCCA TTTGTTGCCAAATCT Spea_2043 2473349 - 2475523 + | malate synthase G TERM 2825 2475580 - 2475547 - T 100 -17.7 -3.51329 | opp_overlap 2475553, overlap 2475553 TAGGGGGAACCACAA TAAAAAGCCCTAACC ATTC GGTTAGGGCTTTCTA ATGATTAAAGCAAGT TERM 2826 2475553 - 2475574 + T 100 -14.5 -4.02022 | opp_overlap 2475553 2475547 GAACCACAATAAAAA GCCCTAACC ATTC GGTTAGGGC TTTCTAATGATTAAA TERM 2827 2475574 - 2475553 - T 100 -14.5 -5.24416 | opp_overlap 2475553, overlap 2475547 GAACCACAATAAAAA GCCCTAACC ATTC GGTTAGGGC TTTCTAATGATTAAA Spea_2044 2478210 - 2475595 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2828 2478229 - 2478255 + H 70 -9.6 -2.7371 | opp_overlap 2478230, overlap 2478228 CGCAATCCTGAAAAA ATTTAGCCAAAT CGT ATTTGGCTAAAC ATTCTCTAGTGCTCT TERM 2829 2478254 - 2478230 - H 100 -13.1 -5.055 | opp_overlap 2478229 2478228 GCAATCCTGAAAAAA TTTAGCCAAAT CGT ATTTGGCTAAA CATTCTCTAGTGCTC TERM 2830 2478524 - 2478514 - H 77 -8.2 -4.27694 | opp_overlap 2478514, overlap 2478511 TTAATGAACAAATAA CGCC TTG GGCG TGTTGAGGAAACGAC TERM 2831 2478546 - 2478564 + G 84 -4.7 -5.27923 | GGAAACGACGGTGGA TTTAACA CTCTA TGTTAAA TTTTTTCTCGGCTTA Spea_2045 2478541 - 2479164 + | hypothetical protein TERM 2832 2479186 - 2479217 + T 95 -13.2 -3.73072 | opp_overlap 2479187 2479194, overlap 2479187 2479194 ACCGGTTTATGATGA ATAAAAAAGGCACC TTCG GGTGCCTTTTTTAC TTTAGTGCAGAGATT TERM 2833 2479216 - 2479187 - T 100 -16.7 -3.21099 | opp_overlap 2479186 2479187 2479194, overlap 2479194 CCGGTTTATGATGAA TAAAAAAGGCACC TTCG GGTGCCTTTTTTA CTTTAGTGCAGAGAT TERM 2834 2479187 - 2479216 + T 100 -16.7 -2.83522 | opp_overlap 2479187 2479194, overlap 2479186 2479194 CCGGTTTATGATGAA TAAAAAAGGCACC TTCG GGTGCCTTTTTTA CTTTAGTGCAGAGAT TERM 2835 2479194 - 2479209 + T 100 -10.4 -5.40004 | opp_overlap 2479187 2479194, overlap 2479187 2479186 ATGATGAATAAAAAA GGCACC TTCG GGTGCC TTTTTTACTTTAGTG TERM 2836 2479209 - 2479194 - T 100 -10.4 -5.52023 | opp_overlap 2479194 2479187 2479186, overlap 2479187 ATGATGAATAAAAAA GGCACC TTCG GGTGCC TTTTTTACTTTAGTG Spea_2046 2480575 - 2479241 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein Spea_2047 2481181 - 2480594 - | hypothetical protein TERM 2837 2481229 - 2481269 + r 79 -8.6 -3.97413 | gap 1, opp_overlap 2481243, overlap 2481231 2481238 2481243 TCAGATTAGCATAGT TAGAAAACAAAAAACGACC CTGA GGTCGTTTTAT-TTTTCTG TGTTTTATTAGTGAG TERM 2838 2481231 - 2481267 + r 74 -9 -3.56868 | gap 1, opp_overlap 2481243, overlap 2481229 2481238 2481243 AGATTAGCATAGTTA GAAAACAAAAAACGACC CTGA GGTCGTTTTAT-TTTTC TGTGTTTTATTAGTG TERM 2839 2481238 - 2481261 + r 91 -8.2 -5.186 | opp_overlap 2481243, overlap 2481231 2481229 2481243 CATAGTTAGAAAACA AAAAACGACC CTGA GGTCGTTTTA TTTTTCTGTGTTTTA TERM 2840 2481243 - 2481256 + r 93 -8.1 -5.38839 | opp_overlap 2481243, overlap 2481238 2481231 2481229 TTAGAAAACAAAAAA CGACC CTGA GGTCG TTTTATTTTTCTGTG TERM 2841 2481256 - 2481243 - R 100 -8.1 -5.86976 | opp_overlap 2481243 2481238 2481231 2481229 TTAGAAAACAAAAAA CGACC CTGA GGTCG TTTTATTTTTCTGTG Spea_2048 2482499 - 2481285 - | aminotransferase AlaT TERM 2842 2482080 - 2482060 - G 73 -9.7 -3.4072 | GATTCTTCATCACAA CGGTAATGC TGT GCTTTACCG CCAGACAGGTGCACA TERM 2843 2482812 - 2482795 - R 100 -11.3 -5.5112 | opp_overlap 2482795 TGCAGCAATAAAAAA GCCAGCA TATT TGCTGGC TTTGTAAAGCGGCTT TERM 2844 2482795 - 2482812 + r 90 -11.3 -3.86194 | opp_overlap 2482795 TGCAGCAATAAAAAA GCCAGCA TATT TGCTGGC TTTGTAAAGCGGCTT Spea_2049 2483395 - 2482835 - | elongation factor P TERM 2845 2483406 - 2483416 + r 85 -5.4 -5.19879 | TTCATTACACTATTT CCTA TTT TAGG TTTTTCTATTTAAAC Spea_2050 2484654 - 2483440 - | hypothetical protein TERM 2846 2483785 - 2483797 + g 70 -9.1 -3.41229 | opp_overlap 2483785 2483781 2483780, overlap 2483787 2483791 AATATTAAAATCACA GCTCC AGA GGAGC TTGTCATAGCCCTCT TERM 2847 2484731 - 2484712 - R 95 -9.3 -5.36441 | opp_overlap 2484687 2484712 TTTTGAGACAAAAAA GCGGCAT ATTATA ATGCCGC TTTTACAAGAAGTTC TERM 2848 2484712 - 2484731 + r 83 -9.3 -4.08692 | opp_overlap 2484712, overlap 2484687 TTTTGAGACAAAAAA GCGGCAT ATTATA ATGCCGC TTTTACAAGAAGTTC Spea_2051 2485306 - 2484779 - | flavodoxin FldA Spea_2052 2485635 - 2485363 - | LexA regulated protein Spea_2053 2485868 - 2485647 - | hypothetical protein TERM 2849 2485715 - 2485701 - G 79 -9.2 -4.15044 | CCCTTTTGCAATAAA CCCGGC ACA GCCGAG AAATAAAACGAGCCA Spea_2054 2486723 - 2485965 - | alpha/beta hydrolase fold TERM 2850 2486323 - 2486337 + g 72 -8.6 -3.74693 | GCAAGAGCTTGGCGG CGATCT TTT AGATCG TTTAATGGCATAGAC Spea_2055 2486928 - 2487536 + | replication initiation regulator SeqA Spea_2056 2487611 - 2489257 + | phosphoglucomutase TERM 2851 2489441 - 2489426 - T 86 -10.4 -4.05607 | opp_overlap 2489426 AGATCACAATAAGAA GCCCCA ATTT TGGGGC TTTTTCATTTGATTT TERM 2852 2489426 - 2489441 + T 93 -10.4 -5.05577 | opp_overlap 2489426 AGATCACAATAAGAA GCCCCA ATTT TGGGGC TTTTTCATTTGATTT Spea_2057 2490237 - 2489806 - | hypothetical protein Spea_2058 2490739 - 2490368 - | hypothetical protein Spea_2059 2491299 - 2490814 - | hypothetical protein Spea_2060 2492212 - 2492955 + | hypothetical protein Spea_2061 2496497 - 2493222 - | hypothetical protein TERM 2853 2495112 - 2495102 - G 72 -5.4 -4.46112 | opp_overlap 2495084, overlap 2495084 GTTTATGCAAATAAA TGAC TTC GTCA AAGAATTCAATATTT TERM 2854 2495370 - 2495392 + g 76 -8.4 -4.05529 | opp_overlap 2495370 AGCTGAGCCAACTAA GCCTAGCATC ATG GAAGTTAGGC TTCTTTCATCATTAT Spea_2062 2497486 - 2497076 - | ferredoxin Spea_2063 2498585 - 2497455 - | ribonucleotide-diphosphate reductase subunit beta TERM 2855 2498620 - 2498604 - R 72 -9.3 -3.29511 | opp_overlap 2498605, overlap 2498605 TCTATCTTCCGATAA TGGGGGC TAG GCCCCCT TAAATTAACGTTTAA TERM 2856 2498605 - 2498619 + r 85 -12.8 -3.1996 | opp_overlap 2498605 2498604 CTATCTTCCGATAAT GGGGGC TAG GCCCCC TTAAATTAACGTTTA TERM 2857 2498619 - 2498605 - R 83 -12.8 -2.57564 | opp_overlap 2498605, overlap 2498604 CTATCTTCCGATAAT GGGGGC TAG GCCCCC TTAAATTAACGTTTA Spea_2064 2500946 - 2498658 - | ribonucleotide-diphosphate reductase subunit alpha TERM 2858 2501334 - 2501279 - R 91 -10.8 -4.42976 | gap 2, opp_overlap 2501285, overlap 2501285 GGATAAATGAACAAA TAAAAATGATCTGTC-GGATCGC-CA CTTAGT TGAGCGATCCAGGCAGATCATTTTGA CGACTTTAGTATGAA TERM 2859 2501285 - 2501328 + r 91 -12 -4.12942 | gap 2, opp_overlap 2501279 2501285 ATGAACAAATAAAAA TGATCTGTC-GGATCGC-CA CTTAGT TGAGCGATCCAGGCAGATCA TTTTGACGACTTTAG TERM 2860 2501328 - 2501285 - R 100 -9.8 -5.48514 | gap 2, opp_overlap 2501285, overlap 2501279 ATGAACAAATAAAAA TGATCTGTC-GGATCGC-CA CTTAGT TGAGCGATCCAGGCAGATCA TTTTGACGACTTTAG Spea_2065 2502081 - 2501398 - | HAD family hydrolase Spea_2066 2502784 - 2502074 - | 3-demethylubiquinone-9 3-methyltransferase TERM 2861 2502175 - 2502191 + g 73 -9.5 -3.33492 | TCCCGACAGCATCTT TGCAGAA CAG TTCTGCA TTATCGGCTAAATCG Spea_2067 2503066 - 2505777 + | DNA gyrase, A subunit TERM 2862 2505815 - 2505831 + T 100 -12.3 -5.93252 | opp_overlap 2505815 TTGATTTGAAAAAAA GGATGCC AAT GGCATCC TTTTTTGTTTTTAGC TERM 2863 2505831 - 2505815 - T 100 -12.3 -5.44119 | opp_overlap 2505815 TTGATTTGAAAAAAA GGATGCC AAT GGCATCC TTTTTTGTTTTTAGC TERM 2864 2506234 - 2506220 - T 73 -10 -2.84602 | opp_overlap 2506215 2506220, overlap 2506219 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTGCTTTATAACAG TERM 2865 2506220 - 2506234 + T 75 -10 -3.05997 | opp_overlap 2506220 2506219, overlap 2506215 CGCACGGTAGGAAAG CTCCCT TTT AGGGAG TCTGCTTTATAACAG TERM 2866 2506257 - 2506282 + T 77 -6.1 -4.55798 | opp_overlap 2506249 2506259 2506260, overlap 2506252 2506259 2506260 2506266 2506269 TATAACAGATGGGCA AAGCCACCTTC TTCA GAAGGTGGATC TTTTACTTTCAGATG TERM 2867 2506280 - 2506259 - T 72 -8.7 -3.60948 | opp_overlap 2506252 2506257 2506259 2506260 2506266 2506269, overlap 2506249 2506260 TAACAGATGGGCAAA GCCACCTTC TTCA GAAGGTGGA TCTTTTACTTTCAGA TERM 2868 2506259 - 2506280 + T 77 -8.7 -3.88396 | opp_overlap 2506249 2506259 2506260, overlap 2506252 2506257 2506260 2506266 2506269 TAACAGATGGGCAAA GCCACCTTC TTCA GAAGGTGGA TCTTTTACTTTCAGA TERM 2869 2506279 - 2506260 - T 81 -12.2 -2.76087 | opp_overlap 2506252 2506259 2506257 2506260 2506266 2506269, overlap 2506249 2506259 AACAGATGGGCAAAG CCACCTTC TTCA GAAGGTGG ATCTTTTACTTTCAG TERM 2870 2506260 - 2506279 + T 82 -12.2 -2.92314 | opp_overlap 2506249 2506260 2506259, overlap 2506252 2506259 2506257 2506266 2506269 AACAGATGGGCAAAG CCACCTTC TTCA GAAGGTGG ATCTTTTACTTTCAG TERM 2871 2506348 - 2506328 - T 80 -11.1 -3.37654 | opp_overlap 2506330, overlap 2506321 2506330 TGAACAAACGACCAA TAGCGGCTG CTA CAGCCGCTT ATATTCCAAGCTTGT TERM 2872 2506330 - 2506346 + T 95 -13.7 -3.66556 | opp_overlap 2506330 2506328 2506321 AACAAACGACCAATA GCGGCTG CTA CAGCCGC TTATATTCCAAGCTT TERM 2873 2506346 - 2506330 - T 93 -13.7 -3.24598 | opp_overlap 2506330, overlap 2506328 2506321 AACAAACGACCAATA GCGGCTG CTA CAGCCGC TTATATTCCAAGCTT Spea_2068 2507504 - 2506347 - | beta-lactamase Spea_2069 2508137 - 2509228 + | phosphoserine aminotransferase TERM 2874 2509258 - 2509279 + T 100 -11.6 -5.33921 | opp_overlap 2509258 CAGCTTAAAAAGAAA GCCGACAC ATAGAA GTGTCGGC TTTTTTAATTGCTTT TERM 2875 2509279 - 2509258 - T 95 -11.6 -4.87389 | opp_overlap 2509258 CAGCTTAAAAAGAAA GCCGACAC ATAGAA GTGTCGGC TTTTTTAATTGCTTT Spea_2070 2510500 - 2509307 - | aromatic amino acid aminotransferase TERM 2876 2510688 - 2510659 - H 78 -3.7 -5.24531 | gap 1, overlap 2510661 ATTTCGCATAAAAAA TC-GACCTTAAACA ACA CGCTTAAAGTCTGA CTTATCGATACTTGA Spea_2071 2510909 - 2512189 + | 3-phosphoshikimate 1-carboxyvinyltransferase Spea_2072 2512366 - 2513058 + | cytidylate kinase TERM 2877 2513050 - 2513063 + F 70 -9.5 -2.74514 | opp_overlap 2513040 CAAAAGCTCCAAGTG CCGGC GTAA GCCGG TACTTAACCATTTGC TERM 2878 2513095 - 2513074 - f 71 -9.5 -2.75064 | opp_overlap 2513074, overlap 2513071 GCCGGTACTTAACCA TTTGCCCCA AGGA TGAGGCAAA TTATTATACTGACTC TERM 2879 2513074 - 2513095 + F 71 -7.3 -3.8512 | opp_overlap 2513071 2513074 GCCGGTACTTAACCA TTTGCCCCA AGGA TGAGGCAAA TTATTATACTGACTC Spea_2073 2513156 - 2514823 + | 30S ribosomal protein S1 Spea_2074 2514896 - 2515183 + | integration host factor, beta subunit TERM 2880 2515216 - 2515201 - f 89 -10.4 -4.27617 | opp_overlap 2515201 TACATTGTATTAAAA GCCTCC ATTA GGAGGC TTTTTTATACCTAAA TERM 2881 2515201 - 2515216 + F 100 -10.4 -5.28176 | opp_overlap 2515201 TACATTGTATTAAAA GCCTCC ATTA GGAGGC TTTTTTATACCTAAA Spea_2075 2515294 - 2515614 + | hypothetical protein Spea_2076 2515616 - 2516776 + | hypothetical protein TERM 2882 2517197 - 2517170 - g 84 -10.6 -3.88787 | CCATACGGCGATAAA GCTCCGTTACTG ATCG CAGTAACAGTGC TGACATCTATGAGCG Spea_2077 2516843 - 2517538 + | orotidine 5'-phosphate decarboxylase Spea_2078 2517614 - 2518420 + | short chain dehydrogenase Spea_2079 2518482 - 2519024 + | hypothetical protein TERM 2883 2519055 - 2519079 + T 100 -9.4 -6.13 | opp_overlap 2519055 ACAGTGACGTTTAAA GCCGTAATGA TCAAC TCATTATGGC TTTTTTTTTGCCTCT Spea_2080 2520182 - 2519235 - | magnesium and cobalt transport protein CorA Spea_2081 2520504 - 2522264 + | acyl-CoA dehydrogenase domain-containing protein TERM 2884 2522291 - 2522329 + T 100 -23.6 -3.65314 | opp_overlap 2522301, overlap 2522301 GATAAGCTAGTCCTG CAAATAAAAACGCCACTT TTA AAGTGGCGTTTTTATTTG TTATTAAAACTTGAA TERM 2885 2522301 - 2522319 + T 100 -13.2 -5.52807 | opp_overlap 2522301, overlap 2522291 TCCTGCAAATAAAAA CGCCACTT TTA AAGTGGCG TTTTTATTTGTTATT TERM 2886 2522319 - 2522301 - T 100 -13.2 -5.27335 | opp_overlap 2522291 2522301 TCCTGCAAATAAAAA CGCCACTT TTA AAGTGGCG TTTTTATTTGTTATT Spea_2082 2523774 - 2522377 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 2887 2523627 - 2523615 - G 72 -9.1 -3.55824 | overlap 2523613 TAGCAGGGACAAATA GACGC TCT GCGTC CTTACGAAATCCTAC Spea_2083 2524170 - 2523994 - | hypothetical protein Spea_2084 2524424 - 2524756 + | hypothetical protein Spea_2085 2524740 - 2526080 + | phosphatidylserine synthase TERM 2888 2526107 - 2526124 + F 90 -4.8 -5.61881 | opp_overlap 2526107 GACTAACGATTAAAA GCCTGC CGATGA GTAGGC TTTTTCTTTTTAAAA Spea_2086 2526195 - 2526956 + | DTW domain-containing protein Spea_2087 2527076 - 2527315 + | hypothetical protein Spea_2088 2527939 - 2527340 - | two component LuxR family transcriptional regulator TERM 2889 2527378 - 2527368 - G 79 -4.6 -5.1675 | TTACCCATCAAAAAA GCCA ATT CGGC AACGTTACTGACCTG TERM 2890 2527846 - 2527833 - G 72 -6.7 -4.20783 | ACTTGATTTAAGAAA CTGTC GGCG GACAG GAATCCTTGGGGTTG TERM 2891 2527854 - 2527874 + g 75 -9.7 -3.60296 | GCGGACAGGAATCCT TGGGGTTGG AAG CCAAGCCCA TTTAACATCCAAGTC Spea_2089 2529722 - 2527932 - | histidine kinase TERM 2892 2528642 - 2528654 + g 82 -5.5 -5.20783 | AAAACTGCTTTGTTT GCTCT AGT AGGGC TTTTTGTGTTTGAGT TERM 2893 2529192 - 2529169 - G 72 -10.4 -2.89212 | overlap 2529168 2529165 ATCAGTGACAATAAC TTTTGCTGGG GAAA CCCAACAAAA TTCAACTGTTTAAAA TERM 2894 2529916 - 2529955 + r 100 -14.1 -4.15788 | opp_overlap 2529919, overlap 2529919 AATAGTGGATTATGA TAATACTGAATTAAATT TGTCAC AATTTAATTCAGTATTA TTTGTTGCAGGGATT TERM 2895 2529919 - 2529952 + r 93 -11.4 -4.20367 | opp_overlap 2529919, overlap 2529916 AGTGGATTATGATAA TACTGAATTAAATT TGTCAC AATTTAATTCAGTA TTATTTGTTGCAGGG TERM 2896 2529952 - 2529919 - R 85 -11.4 -3.44229 | opp_overlap 2529919 2529916 AGTGGATTATGATAA TACTGAATTAAATT TGTCAC AATTTAATTCAGTA TTATTTGTTGCAGGG Spea_2090 2531346 - 2530063 - | ApbE family lipoprotein TERM 2897 2531399 - 2531414 + H 72 -9 -3.31799 | opp_overlap 2531385 2531399 2531395 2531390 ACGCAACTTAACGTA TTGCGG TTTT CCGCAA TTGTGAAGAATTATA Spea_2091 2531477 - 2532820 + | FMN-binding domain-containing protein Spea_2092 2532902 - 2533942 + | porin Spea_2093 2534506 - 2535288 + | pseudouridine synthase Spea_2094 2536550 - 2535348 - | integrase family protein TERM 2898 2536623 - 2536577 - H 80 -6.2 -4.66609 | gap 3, opp_overlap 2536581, overlap 2536578 2536579 TATTCTACTTAAAAA CCCTTATCCCTACCAGTGATAAT CGTC ATTATCACTGGTAGAG-C--GGG ATTAAATACTTTTTG TERM 2899 2537120 - 2537130 + H 81 -5.4 -5.03961 | ACATTTAAATTATTA TGGT GAC ACCA TTTTATTGTTTAGTT Spea_2095 2537317 - 2537817 + | hypothetical protein TERM 2900 2537878 - 2537901 + T 73 -9.6 -3.15124 | opp_overlap 2537876 2537872 2537878, overlap 2537876 2537869 TTTTACATATTAACA CCGTTAAGCC ACTA GGCTTAGTGG TCTTAAATACTTTTA Spea_2096 2539006 - 2537984 - | hypothetical protein Spea_2097 2539157 - 2539546 + | hypothetical protein TERM 2901 2539682 - 2539699 + T 70 -9.9 -2.62192 | opp_overlap 2539684, overlap 2539681 2539684 AGCTCCTGTGTATGA GAGTCTG TAGA CAGACTC GTTAATTGAATAGCA TERM 2902 2539718 - 2539740 + T 100 -9.9 -5.37345 | opp_overlap 2539710 2539718 AATTGAATAGCAAAA GGCTAAGCG AAATG TGCTTAGCC TTTTTTGTCCTTAAC TERM 2903 2539740 - 2539718 - T 86 -9.2 -4.44284 | opp_overlap 2539718, overlap 2539710 AATTGAATAGCAAAA GGCTAAGC GAAATGT GCTTAGCC TTTTTTGTCCTTAAC Spea_2098 2540286 - 2539792 - | putative orphan protein TERM 2904 2540031 - 2540006 - G 78 -6.2 -4.63218 | opp_overlap 2540005 2540006 2540008 2540011 TCTGTTCCAATAAAA GATAACGGGA TATTCG TGCCGTTATC CTGTTTTAAATCAAA Spea_2099 2542745 - 2540289 - | putative Zn-dependent aminopeptidase TERM 2905 2543647 - 2543674 + G 74 -8.5 -3.85909 | opp_overlap 2543660 TGGTGATTTTTACGA CTACCAAGGAA AACCAA TACCTTGGTAG TTTCAATTTGGGTGG Spea_2100 2542979 - 2543674 + | short-chain dehydrogenase/reductase SDR TERM 2906 2543814 - 2543856 + F 89 -10 -4.19276 | overlap 2543815 2543818 TTGTTTCACCGTGAC TTCAGACGTTTATCGCGTTT AAA AACCGCGATAGATGTCTCAG TTTTCAGGATTTTAG TERM 2907 2543815 - 2543855 + F 82 -11.3 -3.10843 | overlap 2543814 2543818 TGTTTCACCGTGACT TCAGACGTTTATCGCGTTT AAA AACCGCGATAGATGTCTCA GTTTTCAGGATTTTA TERM 2908 2543818 - 2543852 + F 90 -13 -2.75349 | overlap 2543815 2543814 TTCACCGTGACTTCA GACGTTTATCGCGTTT AAA AACCGCGATAGATGTC TCAGTTTTCAGGATT TERM 2909 2543948 - 2543931 - f 72 -3.3 -5.0133 | opp_overlap 2543931 CATCTGCTGAAAAAA GGAGTAC TTTC GCGCTCC TTAATTTAACTTAAC Spea_2101 2543977 - 2545353 + | alpha-L-glutamate ligase TERM 2910 2545406 - 2545384 - f 91 -10.6 -4.59773 | opp_overlap 2545384 GGTTAGCTCTAAAAA GCGTTATGTC TAA GACATAGCGC TTTTTTTTGTTTAAT TERM 2911 2545384 - 2545406 + F 100 -12.8 -6.25578 | opp_overlap 2545384 GGTTAGCTCTAAAAA GCGTTATGTC TAA GACATAGCGC TTTTTTTTGTTTAAT Spea_2102 2545570 - 2545845 + | hypothetical protein TERM 2912 2545977 - 2545961 - f 93 -12.3 -3.86015 | GATTTGCCTCAGAAA GCCCACA CTT TGTGGGC TACTCCTAATACCAA Spea_2103 2546011 - 2546343 + | hypothetical protein TERM 2913 2546526 - 2546497 - T 90 -13.1 -2.89881 | opp_overlap 2546505, overlap 2546505 TAGTTACTTCAGATA CAAAAAAACCAGC CTAA GCTGGTTTTTTTA GAAGACTAACGAATT TERM 2914 2546505 - 2546518 + T 93 -8.1 -5.40474 | opp_overlap 2546497 2546505 TCAGATACAAAAAAA CCAGC CTAA GCTGG TTTTTTTAGAAGACT TERM 2915 2546518 - 2546505 - T 100 -8.1 -5.76633 | opp_overlap 2546505, overlap 2546497 TCAGATACAAAAAAA CCAGC CTAA GCTGG TTTTTTTAGAAGACT Spea_2104 2547550 - 2546540 - | glyceraldehyde-3-phosphate dehydrogenase, type I Spea_2105 2548602 - 2547769 - | hypothetical protein Spea_2106 2548825 - 2550261 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2916 2550292 - 2550313 + T 100 -8.1 -5.61881 | gap 1, opp_overlap 2550292 CGCTTTCTGATAAAA CGCCTCT-TA CTG TATAGAGGCG TTTTTGTTTTTAGAA TERM 2917 2550313 - 2550292 - T 80 -8.1 -4.36914 | gap 1, opp_overlap 2550292 CGCTTTCTGATAAAA CGCCTCT-TA CTG TATAGAGGCG TTTTTGTTTTTAGAA TERM 2918 2551160 - 2551140 - T 73 -10.5 -2.89742 | overlap 2551143 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGAATAAGCGTGCC TERM 2919 2551157 - 2551143 - T 72 -8.6 -3.5947 | overlap 2551140 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGAATAAGCGT TERM 2920 2551251 - 2551213 - T 70 -9.1 -3.14564 | gap 1, opp_overlap 2551213 2551224, overlap 2551215 2551224 CCATCTTCTTATGAA GA-GTAAATAAACCAGCC ATTG AGCTGGTTTTTTTACATC TAAATTTTAGTATGA TERM 2921 2551248 - 2551215 - T 83 -11.9 -3.13522 | opp_overlap 2551213 2551224, overlap 2551213 2551224 ATCTTCTTATGAAGA GTAAATAAACCAGCC ATTG AGCTGGTTTTTTTAC ATCTAAATTTTAGTA TERM 2922 2551239 - 2551224 - T 79 -6.8 -4.56883 | opp_overlap 2551213 2551224, overlap 2551215 2551213 TGAAGAGTAAATAAA CCAGCC ATTG AGCTGG TTTTTTTACATCTAA TERM 2923 2551224 - 2551239 + T 91 -6.1 -5.50499 | opp_overlap 2551224 2551215 2551213, overlap 2551213 TGAAGAGTAAATAAA CCAGC CATTGA GCTGG TTTTTTTACATCTAA TERM 2924 2551366 - 2551398 + T 95 -15.7 -2.89742 | opp_overlap 2551373, overlap 2551373 CTCTCTTAAGAGTTG CAGAGAAGCCTCGAC GAT GTCGGGGCTTTTTTG TATCTGGCGCTTACG TERM 2925 2551391 - 2551373 - T 79 -10.2 -3.50219 | opp_overlap 2551366 2551373 AAGAGTTGCAGAGAA GCCTCGAC GAT GTCGGGGC TTTTTTGTATCTGGC TERM 2926 2551373 - 2551391 + T 100 -12.4 -5.4251 | opp_overlap 2551373, overlap 2551366 AAGAGTTGCAGAGAA GCCTCGAC GAT GTCGGGGC TTTTTTGTATCTGGC TERM 2927 2551541 - 2551508 - T 73 -9.7 -3.13522 | opp_overlap 2551517, overlap 2551506 2551517 ATCTTCTTATGAAGA GCAAATAAACCAGCC ATTG AGCTGGTTTTTTTAC GTCTGCAATTTTTAG TERM 2928 2551517 - 2551532 + T 91 -6.1 -5.50499 | opp_overlap 2551517 2551508 2551506 TGAAGAGCAAATAAA CCAGC CATTGA GCTGG TTTTTTTACGTCTGC TERM 2929 2551532 - 2551517 - T 79 -6.8 -4.56883 | opp_overlap 2551517, overlap 2551508 2551506 TGAAGAGCAAATAAA CCAGCC ATTG AGCTGG TTTTTTTACGTCTGC TERM 2930 2552049 - 2552029 - T 73 -10.5 -2.89742 | overlap 2552032 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGAATAAGCGTGCC TERM 2931 2552046 - 2552032 - T 72 -8.6 -3.5947 | overlap 2552029 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGAATAAGCGT TERM 2932 2552127 - 2552113 - T 71 -7.1 -3.7948 | opp_overlap 2552113 TGAAGAGTGACTAAA CCAGC CTAGT GCTGG TTTTTTTACGTCTGC TERM 2933 2552113 - 2552127 + T 93 -7.1 -5.50499 | opp_overlap 2552113 TGAAGAGTGACTAAA CCAGC CTAGT GCTGG TTTTTTTACGTCTGC TERM 2934 2552820 - 2552800 - T 73 -10.5 -2.89742 | overlap 2552803 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGAATAAGCGTGCC TERM 2935 2552817 - 2552803 - T 72 -8.6 -3.5947 | overlap 2552800 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGAATAAGCGT TERM 2936 2552881 - 2552913 + T 95 -15.7 -2.89742 | opp_overlap 2552888, overlap 2552888 CTCTATTAAGAGTTG CAGAGAAGCCTCGAC GAT GTCGGGGCTTTTTTG TATCTGGCGCTTACG TERM 2937 2552888 - 2552906 + T 100 -12.4 -5.4251 | opp_overlap 2552888, overlap 2552881 AAGAGTTGCAGAGAA GCCTCGAC GAT GTCGGGGC TTTTTTGTATCTGGC TERM 2938 2552906 - 2552888 - T 79 -10.2 -3.50219 | opp_overlap 2552888 2552881 AAGAGTTGCAGAGAA GCCTCGAC GAT GTCGGGGC TTTTTTGTATCTGGC TERM 2939 2553363 - 2553347 - T 93 -8 -5.52023 | opp_overlap 2553347 ACGAGGAATAAAAAA GCCCTA ACGAG TAGGGC TTAGGGCTTTAGCTG Spea_2107 2553735 - 2553406 - | DsrC family protein Spea_2108 2554018 - 2553737 - | DsrH family protein Spea_2109 2554374 - 2554018 - | DsrE family protein Spea_2110 2554772 - 2554383 - | DsrE family protein TERM 2940 2554467 - 2554482 + g 73 -4 -4.88918 | AGGAGGTTGCATATT CCAATG GCTG TATTGG TTTTCTTTCGCATCA TERM 2941 2554784 - 2554802 + r 90 -11 -4.21275 | opp_overlap 2554784 TCATGGTAAAAAAAA TGGCCCTG TAA TAGGGCCA TTTTAACTCAATTAA TERM 2942 2554802 - 2554784 - R 100 -10.3 -5.78622 | opp_overlap 2554784 TCATGGTAAAAAAAA TGGCCCT GTAAT AGGGCCA TTTTAACTCAATTAA Spea_2111 2555492 - 2554830 - | hypothetical protein Spea_2112 2556566 - 2555664 - | putative DNA-binding transcriptional regulator TERM 2943 2556570 - 2556585 + H 87 -3.3 -5.86965 | TTCAGAAAGCATGGT TCACA TCCTGC TGTGA TTTTTTTTGATAGCT TERM 2944 2556833 - 2556843 + G 72 -5.4 -4.40561 | overlap 2556830 CATCACAAGTCGCAA TGTC TTT GACA TTCTTTTTAGCCGGC Spea_2113 2556685 - 2557929 + | inner membrane transport protein YdhC TERM 2945 2557955 - 2557978 + T 77 -9.8 -3.53811 | opp_overlap 2557955 TCGTTCTTAATCAAA GTGATAATTT GTTA AAATTATCAC TTTACAAGAACTACA TERM 2946 2557978 - 2557955 - T 83 -9.8 -3.90112 | opp_overlap 2557955 TCGTTCTTAATCAAA GTGATAATTT GTTA AAATTATCAC TTTACAAGAACTACA TERM 2947 2558144 - 2558121 - T 100 -14 -5.1287 | opp_overlap 2558121 GCCACATTTAAAAAA TCCCGTTATC GCAA GATAACGGGA TTTTTGCTATCTGGA TERM 2948 2558121 - 2558144 + T 100 -14 -4.84527 | opp_overlap 2558121 GCCACATTTAAAAAA TCCCGTTATC GCAA GATAACGGGA TTTTTGCTATCTGGA TERM 2949 2558252 - 2558229 - T 93 -13.2 -3.38786 | opp_overlap 2558229 CACATTCAAGATGAA GCCCCTAGCA GAAA TACTAGGGGC TTTTAGTTGGCTGAT TERM 2950 2558229 - 2558252 + T 91 -11 -4.43879 | opp_overlap 2558229 CACATTCAAGATGAA GCCCCTAGCA GAAA TACTAGGGGC TTTTAGTTGGCTGAT Spea_2114 2559073 - 2558294 - | 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase Spea_2115 2560579 - 2559224 - | major facilitator transporter TERM 2951 2559549 - 2559536 - G 100 -3.7 -5.88197 | CCAAACAGAAAAAAA GCTCG TTAG CGCGC AAGCAAACATCGCGA TERM 2952 2560075 - 2560062 - G 73 -2.3 -5.16132 | GAGAGTAAAAGAAAA GTGTG GCGC CACCC CAATAGACCAATGAG Spea_2116 2561604 - 2560582 - | 4-hydroxy-2-ketovalerate aldolase Spea_2117 2562537 - 2561614 - | acetaldehyde dehydrogenase Spea_2118 2563399 - 2562584 - | 4-oxalocrotonate decarboxylase Spea_2119 2564378 - 2563410 - | flavin reductase domain-containing protein Spea_2120 2564669 - 2566093 + | aldehyde dehydrogenase TERM 2953 2566127 - 2566145 + T 100 -14.6 -5.38398 | opp_overlap 2566127 AGCAATAATGAAAAA TGGCAGCC ACA GGCTGCCA TTTTTATGTTTTTAT TERM 2954 2566145 - 2566127 - T 100 -14.6 -5.00339 | opp_overlap 2566127 AGCAATAATGAAAAA TGGCAGCC ACA GGCTGCCA TTTTTATGTTTTTAT Spea_2121 2567304 - 2566171 - | Rieske (2Fe-2S) domain-containing protein TERM 2955 2567136 - 2567109 - G 76 -9.2 -3.71998 | gap 1, opp_overlap 2567115 CATCGAGTAATACAA CTCTACCAGTGGC TTG GCCAC-GGTATAG TGCAAAGTCGCGTCC Spea_2122 2568750 - 2567365 - | major facilitator transporter Spea_2123 2568927 - 2570036 + | beta-lactamase domain-containing protein TERM 2956 2570035 - 2570018 - f 71 -7.1 -3.90092 | opp_overlap 2570015, overlap 2570021 2570022 ATATTTATATAACAA TAAGCTA AGAA TAGCTTA GGGATTATAGTTAAC Spea_2124 2570076 - 2571773 + | AMP-dependent synthetase and ligase Spea_2125 2572035 - 2573798 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 2957 2575610 - 2575599 - g 85 -7.2 -4.95896 | opp_overlap 2575599 2575598 ATAAAGTCATAAAAA CCGC ATTA GCGG CTGATTTTTCTGCTT Spea_2126 2573987 - 2575627 + | acyl-CoA synthetase TERM 2958 2575663 - 2575690 + T 100 -4.8 -5.75478 | overlap 2575664 AAAAGTTGATTATAG GGCTGCCATGCA TATA TTTATGGCAGCA TTTTTTTATCTGGTT TERM 2959 2575664 - 2575689 + T 79 -8.3 -4.02846 | overlap 2575663 AAAGTTGATTATAGG GCTGCCATGCA TATA TTTATGGCAGC ATTTTTTTATCTGGT TERM 2960 2576299 - 2576260 - T 100 -18.2 -3.70751 | opp_overlap 2576267, overlap 2576261 2576263 TAATAAGTTGAATAA TTATTAAGGCGAATACAG CTAG CTGTATTCGCCTTAATAG GGTTAGAGCAGAGAG TERM 2961 2576298 - 2576261 - T 100 -21.7 -2.81727 | opp_overlap 2576267, overlap 2576260 2576263 AATAAGTTGAATAAT TATTAAGGCGAATACAG CTAG CTGTATTCGCCTTAATA GGGTTAGAGCAGAGA TERM 2962 2576296 - 2576263 - T 100 -19.9 -2.94759 | opp_overlap 2576267, overlap 2576261 2576260 TAAGTTGAATAATTA TTAAGGCGAATACAG CTAG CTGTATTCGCCTTAA TAGGGTTAGAGCAGA TERM 2963 2576267 - 2576292 + T 100 -16.3 -3.18681 | opp_overlap 2576263 2576261 2576260 TTGAATAATTATTAA GGCGAATACAG CTAG CTGTATTCGCC TTAATAGGGTTAGAG Spea_2127 2578784 - 2576334 - | hypothetical protein TERM 2964 2576865 - 2576897 + g 82 -7.2 -4.8543 | gap 1 CAATAAACTAATTGC GCTGAAGATAGAGAT AAGC ATCTGTA-CTTCAGC TTTTTCTACCGCTTC TERM 2965 2578060 - 2578050 - G 82 -3.2 -5.55769 | TGCGATAACAAAAAA CAGT AAA ACCG TAGACAACCCATCCA Spea_2128 2579803 - 2578799 - | BNR repeat-containing glycosyl hydrolase TERM 2966 2579311 - 2579328 + g 80 -6.9 -4.70613 | opp_overlap 2579302, overlap 2579313 TTAAATGCCAATCCG TGGCCGC TGGA GCGGCAA TTTTATTCCAGTTTT Spea_2129 2580214 - 2581437 + | acyl-CoA dehydrogenase type 2 Spea_2130 2581476 - 2582561 + | ferredoxin TERM 2967 2582899 - 2582917 + F 73 -2.3 -5.2422 | overlap 2582901 GTAGTCTCAACGGAC GATGGCG TAAAT CGCTACC TTTTTTAATCTGATT TERM 2968 2583555 - 2583529 - g 75 -10.9 -3.04501 | overlap 2583505 ACTAATTTTTCAAGA GC-CGCTGCAGCC GAA GGC-GCAGCGAGC AACATCCGCGTCAAT Spea_2131 2583010 - 2583798 + | short-chain dehydrogenase/reductase SDR Spea_2132 2583806 - 2584909 + | NADH:flavin oxidoreductase/NADH oxidase Spea_2133 2584935 - 2585684 + | electron transfer flavoprotein alpha/beta-subunit TERM 2969 2586583 - 2586607 + G 70 -5 -4.49958 | CACCTATATTTCAAG TCGCCGACTA TGGCT TAGTTGGAGA TTTATTTACTGCCAT Spea_2134 2585697 - 2586650 + | electron transfer flavoprotein alpha subunit Spea_2135 2586740 - 2587933 + | LuxR family transcriptional regulator Spea_2136 2588783 - 2588001 - | enoyl-CoA hydratase TERM 2970 2588299 - 2588312 + g 72 -6.7 -4.28774 | GGGCGTCCTGTTAGT GCCAT TTGC ATGGC TTTTGCCTTACCTAC TERM 2971 2588385 - 2588416 + g 73 -9.5 -3.47078 | overlap 2588387 CCCTATGGCGATTTC TGGCTGGCAAAAC GCCGCA GTTTCGCCAGCTA TTATAATATCGGCTA TERM 2972 2588387 - 2588414 + g 73 -9.9 -3.30651 | overlap 2588385 CTATGGCGATTTCTG GCTGGCAAAAC GCCGCA GTTTCGCCAGC TATTATAATATCGGC TERM 2973 2589742 - 2589763 + G 71 -3.6 -4.77759 | opp_overlap 2589742, overlap 2589749 CAACTTATTACTTAA CGGAGGCG GCGAAA TGCCTGCG TTTTTAATGGCTTCT Spea_2137 2589023 - 2589793 + | short chain dehydrogenase Spea_2138 2589931 - 2590896 + | hypothetical protein Spea_2139 2590911 - 2592041 + | acyl-CoA dehydrogenase domain-containing protein Spea_2140 2592028 - 2592474 + | dehydratase Spea_2141 2592491 - 2593669 + | lipid-transfer protein Spea_2142 2593672 - 2594841 + | acyl-CoA dehydrogenase domain-containing protein Spea_2143 2594861 - 2596099 + | acyl-CoA dehydrogenase domain-containing protein TERM 2974 2596187 - 2596166 - g 76 -5.1 -4.8048 | TTTTGACATCAAAAA GCCCTGTTG CAGC CAAAAGAGC CTTACGAGATGAAAA Spea_2144 2596096 - 2597301 + | acyl-CoA dehydrogenase domain-containing protein TERM 2975 2597316 - 2597343 + F 86 -12.1 -3.34895 | opp_overlap 2597305 2597316 ATACCGCTGCAATCA CGCGCATTAGT AGCATC GCTAATGCGCG TTCATTCGCAATACA TERM 2976 2597343 - 2597316 - f 79 -11.4 -2.71483 | opp_overlap 2597316, overlap 2597305 ATACCGCTGCAATCA CGCGCATTAG TAGCATCG CTAATGCGCG TTCATTCGCAATACA Spea_2145 2597670 - 2598146 + | hypothetical protein TERM 2977 2598224 - 2598193 - T 90 -12.4 -3.61715 | opp_overlap 2598183, overlap 2598194 CATTGTTCGCAATAA TCGCGGATTATCCA GATG TGAATAATCCGCGC TGGCATAGATTGCGG TERM 2978 2598223 - 2598194 - T 100 -15.9 -2.76815 | opp_overlap 2598183, overlap 2598193 ATTGTTCGCAATAAT CGCGGATTATCCA GATG TGAATAATCCGCG CTGGCATAGATTGCG Spea_2146 2600452 - 2598332 - | NADH:flavin oxidoreductase/NADH oxidase Spea_2147 2601417 - 2600581 - | alpha/beta hydrolase fold TERM 2979 2600842 - 2600861 + g 73 -10 -3.31766 | overlap 2600839 2600843 CTGGGTGGTCGCGAC TTCTGCGC GCTC GCGCAGAG TATTGTCGTCTAGTT TERM 2980 2600843 - 2600860 + g 73 -11.3 -2.58337 | overlap 2600842 2600839 TGGGTGGTCGCGACT TCTGCGC GCTC GCGCAGA GTATTGTCGTCTAGT TERM 2981 2601883 - 2601871 - g 74 -3.3 -5.08824 | GCTGCAGCTAAAAAA GTGGC TGA GCAAC AAAGTGCTGAGTCAG Spea_2148 2601739 - 2602482 + | short-chain dehydrogenase/reductase SDR Spea_2149 2602492 - 2603118 + | enzyme Spea_2150 2603184 - 2605049 + | acyl-CoA synthetase Spea_2151 2605062 - 2606273 + | nonspecific lipid-transfer protein Spea_2152 2606276 - 2607211 + | hypothetical protein TERM 2982 2607237 - 2607255 + F 100 -8.1 -5.86061 | CCCCATTTAGCCTTG GCCGAGT TAACC GCTCGGC TTTTTTTTGCTAAAA Spea_2153 2607403 - 2608305 + | glyoxalase/bleomycin resistance protein/dioxygenase Spea_2154 2608306 - 2609181 + | coenzyme A transferase Spea_2155 2609256 - 2610086 + | coenzyme A transferase Spea_2156 2610086 - 2611042 + | enoyl-CoA hydratase Spea_2157 2611039 - 2612193 + | 2-nitropropane dioxygenase NPD Spea_2158 2612196 - 2612981 + | enoyl-CoA hydratase TERM 2983 2614009 - 2613999 - g 72 -8.2 -3.7948 | opp_overlap 2613998 2613992 2613999 TGAAGATGCACGAAA CCGC TAT GCGG ATTTTGGGTTCTCGC Spea_2159 2613011 - 2614168 + | acyl-CoA dehydrogenase domain-containing protein TERM 2984 2614326 - 2614316 - g 74 -5.4 -4.64334 | AATTGCGCAATAAAA TTGC CGA GCAA GGCTTAACGGCACTA TERM 2985 2615235 - 2615222 - g 70 -2.4 -5.011 | ACGCAAATAACAAAA TTGG TCCAGG CCAA ACCTTTGGGAGAACA Spea_2160 2614177 - 2615253 + | acyl-CoA dehydrogenase domain-containing protein Spea_2161 2615253 - 2616407 + | acetyl-CoA acetyltransferase Spea_2162 2616463 - 2617341 + | short chain dehydrogenase Spea_2163 2617412 - 2619007 + | amidase TERM 2986 2619111 - 2619140 + F 70 -7.9 -3.75067 | overlap 2619111 2619112 ACTTTTGCCCCAACG TTGGTTAGCCTTC GAGT GAAGGCTGATCAC ATTTTTTCTCAGCTG TERM 2987 2619111 - 2619141 + F 87 -6.3 -5.26918 | gap 1, overlap 2619111 2619112 ACTTTTGCCCCAACG T-TGGTTAGCCTTC GAGT GAAGGCTGATCACA TTTTTTCTCAGCTGT TERM 2988 2619112 - 2619139 + F 80 -11.4 -2.84317 | overlap 2619111 2619111 CTTTTGCCCCAACGT TGGTTAGCCTTC GAGT GAAGGCTGATCA CATTTTTTCTCAGCT TERM 2989 2619412 - 2619429 + F 70 -9.9 -2.62184 | opp_overlap 2619421 GCACCCTGTTTATCA GCTTAGC AATA GCTAAGC TAATGTGAGGCGCAA Spea_2164 2619714 - 2620526 + | hypothetical protein Spea_2165 2620704 - 2621144 + | hypothetical protein TERM 2990 2621911 - 2621925 + T 71 -7.2 -3.84451 | TTTGGGGTTTTGTAA TCAAAC TAA GTTTGA TTTGGCTTTACGAGG TERM 2991 2621991 - 2622012 + T 77 -10.1 -3.33815 | opp_overlap 2621993, overlap 2621993 ACAACGAACTAAAAA AACGGCTCC TGTA GGAGCCGTA TTAATTAACACAGAT TERM 2992 2621993 - 2622010 + T 85 -12.7 -3.23853 | opp_overlap 2621993, overlap 2621991 AACGAACTAAAAAAA CGGCTCC TGTA GGAGCCG TATTAATTAACACAG TERM 2993 2622010 - 2621993 - T 100 -12.7 -5.66868 | opp_overlap 2621991 2621993 AACGAACTAAAAAAA CGGCTCC TGTA GGAGCCG TATTAATTAACACAG Spea_2166 2623617 - 2622091 - | hypothetical protein Spea_2167 2625029 - 2623644 - | hypothetical protein TERM 2994 2625076 - 2625086 + H 88 -2.6 -5.95539 | ACAAGGTCTTGTTGA TAAT CTC ATTA TTTTTTTGTTTAAAA TERM 2995 2625293 - 2625303 + H 72 -4.6 -4.75404 | GTGAGCATTCAATTC GCCG TAC TGGC TTTTTAGTCCACTTT Spea_2168 2625425 - 2626210 + | short chain dehydrogenase Spea_2169 2626222 - 2626707 + | dehydratase TERM 2996 2627488 - 2627510 + G 79 -8.4 -4.258 | opp_overlap 2627487, overlap 2627489 GGCAATGCATCACAG TTTGCCGATG GCG CAGCGGCAAG TTTATTAATGAGTAA TERM 2997 2627489 - 2627509 + G 71 -9.7 -3.14998 | opp_overlap 2627487, overlap 2627488 GCAATGCATCACAGT TTGCCGATG GCG CAGCGGCAA GTTTATTAATGAGTA Spea_2170 2626720 - 2627925 + | acetyl-CoA acetyltransferase Spea_2171 2627940 - 2628788 + | enoyl-CoA hydratase/isomerase Spea_2172 2628853 - 2630499 + | electron-transferring-flavoprotein dehydrogenase TERM 2998 2631272 - 2631282 + G 72 -3.2 -4.99645 | CCGTCCTGAAGACGT CGCT AAT AGTG TTTTATTTCTAGCGT Spea_2173 2630610 - 2631374 + | short-chain dehydrogenase/reductase SDR Spea_2174 2631413 - 2631784 + | nuclear transport factor 2 Spea_2175 2631837 - 2633042 + | acyl-CoA dehydrogenase domain-containing protein TERM 2999 2633591 - 2633619 + G 70 -2.4 -4.96773 | GTCGCTAGAACCGAT CCAAAGTCTGTT GGCCA AAAAGGCTTGGG TTTCTTTTTAGTTAA Spea_2176 2633042 - 2634232 + | acyl-CoA dehydrogenase domain-containing protein TERM 3000 2634323 - 2634280 - T 100 -17.2 -4.65895 | gap 1, opp_overlap 2634291, overlap 2634291 TCGGCTAGCGAAAAA TGCAAT-AAAAAGCCTGAAGA ATA TCTTCAGGCTTTTTTATTACA CGCTTAATACTTGAA TERM 3001 2634311 - 2634291 - T 100 -14.1 -5.17507 | opp_overlap 2634291, overlap 2634280 AAAATGCAATAAAAA GCCTGAAGA ATA TCTTCAGGC TTTTTTATTACACGC TERM 3002 2634291 - 2634311 + T 100 -14.1 -5.4505 | opp_overlap 2634280 2634291 AAAATGCAATAAAAA GCCTGAAGA ATA TCTTCAGGC TTTTTTATTACACGC Spea_2177 2637514 - 2634341 - | acriflavin resistance protein Spea_2178 2638711 - 2637518 - | RND family efflux transporter MFP subunit TERM 3003 2639189 - 2639172 - R 95 -11.3 -5.10767 | opp_overlap 2639172 GAGCGAATAGAAAAA GCAGTGC TAAT GCACTGC TTTAAATTCTACGAT TERM 3004 2639172 - 2639189 + r 90 -11.3 -3.80893 | opp_overlap 2639172 GAGCGAATAGAAAAA GCAGTGC TAAT GCACTGC TTTAAATTCTACGAT Spea_2179 2639541 - 2639206 - | SecC motif-containing protein Spea_2180 2639909 - 2640829 + | putative manganese-dependent inorganic pyrophosphatase TERM 3005 2640866 - 2640885 + T 100 -13.6 -5.12971 | opp_overlap 2640866 TTCAGACATAAAAAA GGCCGAAC AGAT GTTCGGCC TTTTTGTTGGCTCTT TERM 3006 2640885 - 2640866 - T 100 -13.6 -5.4251 | opp_overlap 2640866 TTCAGACATAAAAAA GGCCGAAC AGAT GTTCGGCC TTTTTGTTGGCTCTT Spea_2181 2643300 - 2640913 - | putative ATP-dependent protease La-relatedprotein TERM 3007 2641662 - 2641674 + g 82 -2.6 -5.47159 | overlap 2641658 TAAATTCATCTTTTG CGCG GCAGA TGCG TTTTTCTTTATTAAA TERM 3008 2643534 - 2643561 + r 81 -11.5 -3.03028 | opp_overlap 2643526, overlap 2643506 2643524 2643523 CCATTAAGAGTTTTA CCATTTACTCT ATTGCA AGAGTAAATGG TGTATCTCGGTATTT Spea_2182 2646048 - 2643631 - | peptidase U32 TERM 3009 2644804 - 2644825 + g 73 -10.9 -2.72799 | opp_overlap 2644803, overlap 2644800 CTCTAGTCCACCAAT GCTCGCGAA GCGT TTCGTGAGC TCGTCTGTCTGCAAG TERM 3010 2647487 - 2647475 - g 72 -6.3 -4.30001 | overlap 2647472 2647486 TAAAAAACCAAACAA CCATT ACC AATGG CATGGGGTGAATATG Spea_2183 2646480 - 2647532 + | hypothetical protein TERM 3011 2647565 - 2647586 + F 100 -10.9 -5.52096 | opp_overlap 2647565 AATGACTCCATCAAA GGAAGCAGC ATTA GTTGCTTCC TTTTTTATTGGCTTT TERM 3012 2647586 - 2647565 - f 73 -8.7 -3.75437 | opp_overlap 2647565 AATGACTCCATCAAA GGAAGCAGC ATTA GTTGCTTCC TTTTTTATTGGCTTT Spea_2184 2647701 - 2648342 + | hypothetical protein Spea_2185 2649628 - 2648813 - | putative metallothionein SmtA Spea_2186 2650271 - 2651116 + | beta-lactamase domain-containing protein Spea_2187 2652692 - 2651397 - | cytosine deaminase TERM 3013 2652341 - 2652353 + g 76 -7.7 -4.25676 | CGTGCTGGATACCGT TGGCA ATC TGCCA TTTTAGGGTTTGCTT TERM 3014 2652533 - 2652514 - G 78 -5.6 -4.82901 | overlap 2652516 TGTGGCTCACAAAAA GGTGGCAC AGCC ATGCCGCC TTCACCATCAATCAC Spea_2188 2653968 - 2652703 - | cytosine permease Spea_2189 2654391 - 2654663 + | hypothetical protein TERM 3015 2654715 - 2654665 - T 73 -6.9 -4.19678 | opp_overlap 2654675, overlap 2654670 2654675 CGACATCTGAATAAA TTCAAGCAGACTCGAGCTAACAA GCCTA TTGTTGGCTCGAGTTTACTCGGG AAGTTATTCCCCGCG TERM 3016 2654710 - 2654670 - T 86 -12 -3.37761 | opp_overlap 2654675, overlap 2654665 2654675 TCTGAATAAATTCAA GCAGACTCGAGCTAACAA GCCTA TTGTTGGCTCGAGTTTAC TCGGGAAGTTATTCC TERM 3017 2654705 - 2654675 - T 84 -12.7 -2.9585 | opp_overlap 2654675, overlap 2654670 2654665 ATAAATTCAAGCAGA CTCGAGCTAACAA GCCTA TTGTTGGCTCGAG TTTACTCGGGAAGTT TERM 3018 2654675 - 2654705 + T 100 -14.9 -3.73072 | opp_overlap 2654670 2654665 2654675 ATAAATTCAAGCAGA CTCGAGCTAACAA GCCTA TTGTTGGCTCGAG TTTACTCGGGAAGTT Spea_2190 2656330 - 2654786 - | EmrB/QacA family drug resistance transporter Spea_2191 2657396 - 2656332 - | secretion protein HlyD family protein TERM 3019 2656788 - 2656800 + g 76 -4.7 -4.74504 | overlap 2656789 ACTGGCCTGACTGAG CGCCG CCG CGGCC TTTTTCACTTCCGGT TERM 3020 2656922 - 2656941 + g 72 -8.6 -3.7331 | overlap 2656920 2656931 2656937 CGCGGGCATCATCGA GTTGCTGC GCTG GCAGTAAC TGTTTTGCTACCAGT Spea_2192 2658015 - 2659241 + | RND family efflux transporter MFP subunit TERM 3021 2660528 - 2660513 - g 73 -4.6 -4.77157 | opp_overlap 2660518 2660520, overlap 2660514 TTAATGGATGAAAAA GGGCTG AGTT CATCCC AGGCAACTAAGGTTG TERM 3022 2662066 - 2662048 - g 72 -3.1 -5.01732 | opp_overlap 2662048 AATGGCTGCAAAAAA CTCGATA TTGAT TGTCGAG TTTGCCAACCAATTA Spea_2193 2659241 - 2662375 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Spea_2194 2662368 - 2663924 + | RND efflux system outer membrane lipoprotein Spea_2195 2665344 - 2664091 - | DNA-directed DNA polymerase Spea_2196 2665754 - 2665347 - | peptidase S24/S26 domain-containing protein Spea_2197 2666018 - 2667334 + | diguanylate cyclase TERM 3023 2668007 - 2668019 + G 78 -4.8 -5.06451 | GGTGGAACAAAATGT TCGC TTAGC GCGA TTTTTTGAACTGATG Spea_2198 2667453 - 2668331 + | AraC family transcriptional regulator TERM 3024 2668809 - 2668832 + G 76 -4 -5.03314 | gap 1 CAAGACGATAATTAC GTTGTGCTTCA TAC TGAA-TACAAC TTTTTTGGACCTAAA Spea_2199 2668506 - 2669372 + | hypothetical protein TERM 3025 2669507 - 2669539 + F 90 -9.2 -5.16841 | opp_overlap 2669508, overlap 2669508 TGCTAGCACCAAGTA AGCCGTTAGCTATC ACATG GATAGTTAGCGGCC TTTTTATTCGTGTAA TERM 3026 2669508 - 2669538 + F 90 -12.7 -3.6902 | opp_overlap 2669508, overlap 2669507 GCTAGCACCAAGTAA GCCGTTAGCTATC ACATG GATAGTTAGCGGC CTTTTTATTCGTGTA TERM 3027 2669538 - 2669508 - f 70 -8.3 -3.41693 | opp_overlap 2669508 2669507 GCTAGCACCAAGTAA GCCGTTAGCTATC ACATG GATAGTTAGCGGC CTTTTTATTCGTGTA Spea_2200 2669574 - 2670488 + | hypothetical protein TERM 3028 2670665 - 2670652 - g 72 -5.2 -4.56597 | TGGTTGGGTTAAAAA GGGC TTCACG GCCC AATATCAGCTGATGG Spea_2201 2670476 - 2671345 + | hypothetical protein Spea_2202 2672060 - 2671677 - | hypothetical protein TERM 3029 2672499 - 2672484 - g 82 -5.4 -5.09895 | TATTGATTCAAAAAA CAACTC ATGA GAGTCG AGTTCATCTTGATAT Spea_2203 2672303 - 2672686 + | hypothetical protein TERM 3030 2674307 - 2674317 + G 76 -8.2 -4.11484 | TGGCGTGTTCTTCAT GCGC GTA GCGC TTTTAGCGGCTTCCG Spea_2204 2673302 - 2674417 + | trimethyllysine dioxygenase Spea_2205 2674405 - 2675418 + | threonine aldolase TERM 3031 2676414 - 2676424 + G 74 -5.4 -4.62441 | TCTAAAAATGGTACA CCAA CAT TTGG TTTATTTGTGTCGGG Spea_2206 2675433 - 2676791 + | amino acid permease-associated region TERM 3032 2676851 - 2676875 + T 80 -11.5 -2.75294 | overlap 2676850 2676874 CAATGCTATGTTCAA GGCGCTACA TCAATTT TGTAGCGCC GTTTGGCGGATTTAA Spea_2207 2677928 - 2676990 - | hypothetical protein TERM 3033 2678376 - 2678394 + r 72 -9.6 -3.06796 | opp_overlap 2678376 2678379, overlap 2678379 AATAGATTGAGAGAA CAGCCACT TTC AGTGGTTG TTGGCTAAGGTACGC TERM 3034 2678379 - 2678391 + r 70 -7.7 -3.68073 | opp_overlap 2678376 2678379, overlap 2678376 AGATTGAGAGAACAG CCACT TTC AGTGG TTGTTGGCTAAGGTA Spea_2208 2681204 - 2680656 - | GCN5-related N-acetyltransferase Spea_2209 2681905 - 2681333 - | hypothetical protein TERM 3035 2682538 - 2682559 + r 90 -11.6 -4.09864 | opp_overlap 2682538 TTGGGCATAAAAAAA CCGTACCC GTTAAG GGGTACGG TTTTGCCAAGTACAT TERM 3036 2682559 - 2682538 - R 100 -11.6 -5.60993 | opp_overlap 2682538 TTGGGCATAAAAAAA CCGTACCC GTTAAG GGGTACGG TTTTGCCAAGTACAT Spea_2210 2683710 - 2683156 - | hypothetical protein Spea_2211 2685669 - 2684377 - | integrase family protein Spea_2212 2686034 - 2685777 - | hypothetical protein Spea_2213 2686734 - 2686237 - | hypothetical protein Spea_2214 2686963 - 2688399 + | cytochrome c oxidase, cbb3-type, subunit I Spea_2215 2688412 - 2689026 + | cytochrome c oxidase, cbb3-type, subunit II Spea_2216 2689038 - 2689214 + | Cbb3-type cytochrome oxidase component TERM 3037 2690152 - 2690126 - g 70 -2.2 -5.08601 | opp_overlap 2690131 TTAGGTGAAGAAAAA GTTCACGTAATC ACA GCTTACGTTTAC AGCTTGTCTAACAAG Spea_2217 2689214 - 2690170 + | cytochrome c oxidase, cbb3-type, subunit III TERM 3038 2690223 - 2690203 - f 100 -15.5 -3.9461 | opp_overlap 2690203 TTGGTGTAATAATAA GGCCTCGTT AAC AACGAGGCC TTTTTTTTAAGTGCT TERM 3039 2690203 - 2690223 + F 100 -15.5 -5.82316 | opp_overlap 2690203 TTGGTGTAATAATAA GGCCTCGTT AAC AACGAGGCC TTTTTTTTAAGTGCT Spea_2218 2690320 - 2690799 + | hypothetical protein TERM 3040 2691525 - 2691559 + G 91 -8.5 -5.07652 | gap 1, overlap 2691527 GGGTAAGCATGTTAT TTGCAGCGCCG-GTGG TGTT CTACTCGGCGCAGCCA TTTTATTTTAGCGCC TERM 3041 2691527 - 2691557 + G 74 -11.1 -2.77598 | gap 1, overlap 2691525 GTAAGCATGTTATTT GCAGCGCCG-GTGG TGTT CTACTCGGCGCAGC CATTTTATTTTAGCG Spea_2219 2690867 - 2693251 + | heavy metal translocating P-type ATPase Spea_2220 2693248 - 2693457 + | cytochrome oxidase maturation protein, cbb3-type Spea_2221 2693454 - 2694146 + | hypothetical protein Spea_2222 2694204 - 2694956 + | fumarate/nitrate reduction transcriptional regulator TERM 3042 2695125 - 2695101 - g 78 -5 -5.04175 | gap 1, overlap 2695104 CCAACGACAGAAAAA CAGGCGGCTCT AGCA AGAGCCGT-TG AACTCGCCTCAGAAA Spea_2223 2695050 - 2695982 + | universal stress protein UspE TERM 3043 2696026 - 2696055 + F 87 -4.8 -5.36441 | opp_overlap 2696026 2696024 TAAGCTGGAATAATA CGCGCCCTGAAC TATTGT GTACTAGGCGCG TTTTTTATGTCCGAA Spea_2224 2696062 - 2696997 + | PP-loop domain-containing protein TERM 3044 2697049 - 2697016 - T 83 -10.6 -3.72775 | gap 1, opp_overlap 2697024, overlap 2697024 ATTGATGAATAAAGA TA-AAAAAAGCCCTG ATTAA CAGGGCTTTTTTGTA GCAGTATTTCGGCTC TERM 3045 2697040 - 2697024 - T 100 -9.4 -5.90231 | opp_overlap 2697024, overlap 2697016 ATAAAGATAAAAAAA GCCCTG ATTAA CAGGGC TTTTTTGTAGCAGTA TERM 3046 2697024 - 2697040 + T 100 -9.4 -5.252 | opp_overlap 2697016 2697024 ATAAAGATAAAAAAA GCCCTG ATTAA CAGGGC TTTTTTGTAGCAGTA Spea_2225 2697696 - 2697073 - | hypothetical protein Spea_2226 2698501 - 2697674 - | Bax protein, putative TERM 3047 2698308 - 2698296 - G 88 -7.7 -5.0133 | opp_overlap 2698296 2698295 GACGGCCGTAAAAAA GCGAA AAA TTCGC GTTTCTTTTCACTCA Spea_2227 2698664 - 2699575 + | protein of unknown function UPF0052 and CofD TERM 3048 2699674 - 2699616 - T 100 -16.5 -2.84602 | gap 2, opp_overlap 2699617 2699639 2699671, overlap 2699598 2699639 CCTAGTTCACTAAAT GGTATCGGGCGTTCAATAAAAAAGGACCT TAG AGGTCCTTTTTTATTGAACGCATGA-AC- TTTAAGAGGTAACGC TERM 3049 2699617 - 2699674 + T 100 -24.7 -3.55444 | gap 1, opp_overlap 2699616 2699639, overlap 2699639 2699671 CTAGTTCACTAAATG GTATCGGGCGTTCAATAAAAAAGGACCT TAG AGGTCCTTTTTTATTGAACGCATGA-AC TTTAAGAGGTAACGC TERM 3050 2699639 - 2699653 + T 100 -10 -5.4505 | opp_overlap 2699616 2699639, overlap 2699617 GCGTTCAATAAAAAA GGACCT TAG AGGTCC TTTTTTATTGAACGC TERM 3051 2699653 - 2699639 - T 100 -10 -5.4505 | opp_overlap 2699639 2699617, overlap 2699616 GCGTTCAATAAAAAA GGACCT TAG AGGTCC TTTTTTATTGAACGC Spea_2228 2700883 - 2699690 - | aromatic amino acid aminotransferase TERM 3052 2701121 - 2701102 - R 100 -12.2 -5.52079 | opp_overlap 2701102 AGAGCAAAACAAAAA GCCTTCAC AAAA GTGAAGGC TTTTTATCGATAACG TERM 3053 2701102 - 2701121 + r 100 -12.2 -4.87665 | opp_overlap 2701102 AGAGCAAAACAAAAA GCCTTCAC AAAA GTGAAGGC TTTTTATCGATAACG Spea_2229 2702440 - 2701154 - | seryl-tRNA synthetase TERM 3054 2702400 - 2702376 - G 78 -5 -5.08255 | opp_overlap 2702376, overlap 2702379 ACGTCTAAAATAAAA CCA-CGAGTCGC AAG GCG-CTCGGCGG TCATTTCTAATTCAC Spea_2230 2702833 - 2702459 - | CrcB protein TERM 3055 2702577 - 2702556 - G 73 -10.9 -2.66695 | opp_overlap 2702556, overlap 2702555 2702553 GCTTTCACCAAATAT CCCTGTTGC ATTA GCAACAGAG TCTCATTGGAAAAAG Spea_2231 2704157 - 2702826 - | recombination factor protein RarA TERM 3056 2703128 - 2703115 - G 76 -8.1 -4.07568 | opp_overlap 2703107 2703115 2703114 CTTGCCTTCGCAAAA GCGGT ATAT ACCGC ATTACTCTTAGGTGC TERM 3057 2703762 - 2703752 - G 72 -3.2 -5.06414 | TTGCGCCAATAAAAA TGAC TGT GCCA TCTTCGATGAAAGGC TERM 3058 2703822 - 2703808 - G 76 -8.6 -4.08216 | TGACTCTTGTTAAAA CGATGA ACC TCATCG ACAAATAGCAAGGTG Spea_2232 2704793 - 2704167 - | outer membrane lipoprotein carrier protein LolA TERM 3059 2704269 - 2704295 + g 79 -10.2 -3.53779 | overlap 2704265 2704262 AGGAGTTTGATTCGT CAGGGTAAAATC ACT GGTATTACCCTG TTGATCTTTTAAGAC Spea_2233 2707409 - 2704860 - | cell divisionFtsK/SpoIIIE TERM 3060 2706623 - 2706651 + g 73 -2.5 -5.10665 | gap 1, overlap 2706615 2706624 ATATTTGGGGTTCAA TCCT-AGGTTGA ACGCTG TCAACCTTAGGC TTTTCTTTGTTAACT TERM 3061 2707443 - 2707432 - R 80 -2.2 -5.58454 | CCTACACTAAAAAAA CCTC AATT AAGG ACAAGATACCAGAAA TERM 3062 2707562 - 2707578 + r 93 -9.4 -4.83615 | opp_overlap 2707562 TTTTGTATAAAAAAA GGAGCC CGTTT GGCTCC TTTTTATAGAAAGTA TERM 3063 2707578 - 2707562 - R 100 -9.4 -5.60993 | opp_overlap 2707562 TTTTGTATAAAAAAA GGAGCC CGTTT GGCTCC TTTTTATAGAAAGTA Spea_2234 2708103 - 2707600 - | leucine-responsive transcriptional regulator TERM 3064 2708243 - 2708257 + H 79 -5.7 -4.86033 | opp_overlap 2708241 2708243 AAAATAACAATTACA CCCAT AGAGA ATGGG TTTTTATGCGAATTT TERM 3065 2708330 - 2708316 - g 79 -4.2 -5.1517 | opp_overlap 2708317, overlap 2708317 AAAAGAAATCAAAAA CCACGA ATA TCGTGT TGGTATGGTTCCATC Spea_2235 2708284 - 2709399 + | alanine dehydrogenase TERM 3066 2709417 - 2709435 + T 89 -5.9 -5.46629 | opp_overlap 2709418, overlap 2709418 CGACTCATAAAAAAA AGGAGCC TATAT GGCTCCC TTTTTTTGAACTCTT TERM 3067 2709434 - 2709418 - T 100 -9.4 -5.96219 | opp_overlap 2709418 2709417 GACTCATAAAAAAAA GGAGCC TATAT GGCTCC CTTTTTTTGAACTCT TERM 3068 2709418 - 2709434 + T 83 -9.4 -3.86351 | opp_overlap 2709418, overlap 2709417 GACTCATAAAAAAAA GGAGCC TATAT GGCTCC CTTTTTTTGAACTCT Spea_2236 2710143 - 2709460 - | two component transcriptional regulator TERM 3069 2710291 - 2710267 - R 100 -8.6 -5.68489 | gap 1, opp_overlap 2710267 TACAAGAACAAAAAA GGCCAG-CTGC GGTA GCAAACTGGCC TATTGGAGACAAAGA Spea_2237 2712085 - 2710313 - | hypothetical protein TERM 3070 2711264 - 2711254 - G 74 -8.2 -3.85698 | opp_overlap 2711241 CGGCTTTTTCATAAA GGGC TTT GCCC GACATCCCAGCTTGA Spea_2238 2714160 - 2712235 - | ATP-dependent DNA helicase RecQ Spea_2239 2715110 - 2714229 - | endonuclease/exonuclease/phosphatase Spea_2240 2715271 - 2716728 + | cardiolipin synthetase Spea_2241 2716796 - 2717467 + | hypothetical protein TERM 3071 2717531 - 2717554 + T 100 -15.4 -4.17089 | opp_overlap 2717531 TACAGACAGCAAAAA GCCCGTTATC TTTC GATAACGGGC TTTTCAGAATTTGGC TERM 3072 2717554 - 2717531 - T 100 -15.4 -4.86133 | opp_overlap 2717531 TACAGACAGCAAAAA GCCCGTTATC TTTC GATAACGGGC TTTTCAGAATTTGGC Spea_2242 2719828 - 2717834 - | methyl-accepting chemotaxis sensory transducer TERM 3073 2719927 - 2719942 + r 100 -10.4 -5.95539 | opp_overlap 2719927 TTTTTTGAAAAAAAA GCCCGT ATCA ACGGGC TTTTTTTCTTTAAAC TERM 3074 2719942 - 2719927 - R 100 -10.4 -5.75342 | opp_overlap 2719927 TTTTTTGAAAAAAAA GCCCGT ATCA ACGGGC TTTTTTTCTTTAAAC Spea_2243 2721084 - 2720017 - | quinolinate synthetase TERM 3075 2720544 - 2720566 + g 81 -4.8 -5.10767 | opp_overlap 2720543 2720544 2720546, overlap 2720547 2720549 2720560 TATAGCTGCCTAAAT GACGATCTGG TCC CCAGATAATC TTTTTATCTTCACTG TERM 3076 2721175 - 2721192 + r 88 -11.3 -3.54741 | opp_overlap 2721175, overlap 2721189 GCTGCCAATAAAAAA GGCGCTA TTTC TAGCGCC TTTGAAGGAGTCCTA TERM 3077 2721192 - 2721175 - R 100 -11.3 -5.4505 | opp_overlap 2721175 2721189 GCTGCCAATAAAAAA GGCGCTA TTTC TAGCGCC TTTGAAGGAGTCCTA Spea_2244 2722836 - 2721214 - | dihydrolipoamide acetyltransferase Spea_2245 2723823 - 2722846 - | transketolase central region TERM 3078 2723146 - 2723164 + g 70 -5.2 -4.44974 | GGAGATCCCTTTCTT CGCTGC CATCTCT GCGGCG TTTTCTAAGATTTCC TERM 3079 2723521 - 2723500 - G 80 -9.5 -3.92324 | gap 1, overlap 2723501 GCCGCCAACATTAAA CTCGTTACCG CTG CGGTAACG-G AACTTGGCACTCTCA TERM 3080 2723521 - 2723501 - G 70 -9.7 -2.95073 | overlap 2723500 CCGCCAACATTAAAC TCGTTACCG CTG CGGTAACGG AACTTGGCACTCTCA Spea_2246 2725005 - 2723827 - | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) TERM 3081 2725141 - 2725172 + r 83 -11 -3.73336 | opp_overlap 2725138 2725135 GACAACTAAGCATCT CTGTGCATGTATAT ATTG GTTTACATGCACAG TTATTCAGTTCGAAT Spea_2247 2726225 - 2725188 - | succinylglutamate desuccinylase TERM 3082 2726292 - 2726268 - H 77 -8.7 -3.86897 | opp_overlap 2726275 2726282 TTTATTTGGCAGAAA TTTCAAATACC ACG GGTATTTGTAA CACCTAGCTTCGCTA Spea_2248 2726486 - 2726965 + | peptide methionine sulfoxide reductase Spea_2249 2727570 - 2727127 - | hypothetical protein TERM 3083 2727610 - 2727589 - H 89 -11.7 -3.6715 | opp_overlap 2727593 CTAGGCAACTTGAAA CTCACTTTG GCCC CAAAGTGAG TTAGCCTTCGAATGA Spea_2250 2728173 - 2728463 + | hypothetical protein TERM 3084 2729273 - 2729303 + T 81 -12.1 -2.87132 | opp_overlap 2729278, overlap 2729278 TGCGTGCCGCTTGAG TTAAAGCCCATTG ATGCG TAATGGGCTTTAA TATATCAAGAACAAA TERM 3085 2729278 - 2729298 + T 71 -7.6 -3.88498 | opp_overlap 2729278, overlap 2729273 GCCGCTTGAGTTAAA GCCCATTG ATGCG TAATGGGC TTTAATATATCAAGA Spea_2251 2729785 - 2729423 - | hypothetical protein TERM 3086 2730050 - 2730025 - R 100 -9.8 -5.8187 | gap 1, opp_overlap 2730025 TACCCAATAAAAAAA CCTGCC-CAGT TATTT ACTGCGGCAGG TTTCATATTTACGGT TERM 3087 2730025 - 2730050 + r 86 -9.8 -4.00934 | gap 1, opp_overlap 2730025 TACCCAATAAAAAAA CCTGCC-CAGT TATTT ACTGCGGCAGG TTTCATATTTACGGT Spea_2252 2732093 - 2730078 - | NADH:flavin oxidoreductase/NADH oxidase Spea_2253 2732249 - 2734090 + | signal peptide peptidase SppA, 67K type TERM 3088 2734142 - 2734119 - f 93 -11 -4.70169 | opp_overlap 2734119 TTACAGTTAACAAAA TATGCCCGGC AAAT GCTGGGCATA TTTATTTTCAAATCC TERM 3089 2734119 - 2734142 + F 100 -13.2 -4.67048 | opp_overlap 2734119 TTACAGTTAACAAAA TATGCCCGGC AAAT GCTGGGCATA TTTATTTTCAAATCC Spea_2254 2734394 - 2735410 + | cytoplasmic asparaginase I TERM 3090 2735466 - 2735446 - T 100 -13.3 -4.81357 | opp_overlap 2735446 ACAGCATAAAAGAAA GCCCAAGCA TTT TGCCTGGGC TTTTTTGTTAGCGAT TERM 3091 2735446 - 2735466 + T 100 -11.1 -5.45652 | opp_overlap 2735446 ACAGCATAAAAGAAA GCCCAAGCA TTT TGCCTGGGC TTTTTTGTTAGCGAT Spea_2255 2736041 - 2735760 - | hypothetical protein Spea_2256 2736355 - 2736038 - | hypothetical protein Spea_2257 2737544 - 2736417 - | peptidase M14 carboxypeptidase A TERM 3092 2737800 - 2737778 - H 73 -7 -4.14392 | overlap 2737781 CTGCAATTCGTAAAA CAAGAGGGAT ACT ATTCCCCTTG CAGTACCGTATTCGT Spea_2258 2737834 - 2738784 + | thioredoxin reductase TERM 3093 2738818 - 2738799 - T 82 -8.6 -4.15577 | opp_overlap 2738799 2738797 GGAATAACTAAATAA GAGCGCTT AAAT AAGCACTC TATTGTTAAACTAAA TERM 3094 2738825 - 2738865 + T 95 -14.3 -3.0948 | opp_overlap 2738836, overlap 2738836 TAAGCACTCTATTGT TAAACTAAAAAGCCAACAC TCA GTGTTGGCTTTTTATTTTC TACTATTTTATTTTT TERM 3095 2738836 - 2738854 + T 100 -13.2 -5.56263 | opp_overlap 2738836, overlap 2738825 TTGTTAAACTAAAAA GCCAACAC TCA GTGTTGGC TTTTTATTTTCTACT TERM 3096 2738854 - 2738836 - T 100 -13.2 -4.98531 | opp_overlap 2738836 2738825 TTGTTAAACTAAAAA GCCAACAC TCA GTGTTGGC TTTTTATTTTCTACT Spea_2259 2739491 - 2738883 - | GCN5-related N-acetyltransferase TERM 3097 2739637 - 2739604 - R 93 -13.3 -3.39931 | opp_overlap 2739612, overlap 2739612 AGAATTTAATAGCAA TAAAAAAAGGGAGCC CTAG GGCTCCCTTTTTCGA AAGATTCTAAACTAA TERM 3098 2739612 - 2739629 + r 100 -12.7 -4.58283 | opp_overlap 2739604 2739612 ATAGCAATAAAAAAA GGGAGCC CTAG GGCTCCC TTTTTCGAAAGATTC TERM 3099 2739629 - 2739612 - R 100 -12.7 -5.85737 | opp_overlap 2739612, overlap 2739604 ATAGCAATAAAAAAA GGGAGCC CTAG GGCTCCC TTTTTCGAAAGATTC TERM 3100 2739660 - 2739676 + r 71 -5.1 -4.62336 | TAAACTAATTACTTA GCTAAAG CGT CTTTTGC TTTTTCAACTAAAGT Spea_2260 2740012 - 2739653 - | 50S ribosomal protein L20 Spea_2261 2740225 - 2740031 - | 50S ribosomal protein L35 Spea_2262 2740789 - 2740313 - | translation initiation factor IF-3 Spea_2263 2742787 - 2740859 - | threonyl-tRNA synthetase TERM 3101 2743174 - 2743164 - g 79 -3.2 -5.4492 | GATATAGATAAAAAA GTGA TTG CCAC TCAGATAGAGACCGA Spea_2264 2743074 - 2743340 + | hypothetical protein Spea_2265 2743471 - 2744208 + | short-chain dehydrogenase/reductase SDR TERM 3102 2744353 - 2744332 - g 71 -9.5 -3.17392 | TATGCTGTAACCCAA TCCATATGC GTTT GCACATGGA TGAAGCCAAGCACAA Spea_2266 2744211 - 2744411 + | hypothetical protein Spea_2267 2745068 - 2744451 - | riboflavin synthase subunit alpha TERM 3103 2746227 - 2746260 + G 72 -5.9 -4.53303 | gap 1 AGTGGTTACCGCAGG TGCGCTACGTGGTTAC AAA GATACC-CGCAGCGCA TTTTATATCACACTG Spea_2268 2745103 - 2746461 + | MATE efflux family protein TERM 3104 2746517 - 2746495 - f 100 -7.7 -5.95539 | opp_overlap 2746495 CGCGAAACAAAAAAA GGCTAACTC TTTTC GAGTTGGCC TTTTTATTTTCAATG TERM 3105 2746495 - 2746517 + F 100 -9.9 -5.48213 | opp_overlap 2746495 CGCGAAACAAAAAAA GGCTAACTC TTTTC GAGTTGGCC TTTTTATTTTCAATG Spea_2269 2746572 - 2746706 + | transposase Spea_2270 2746961 - 2747440 + | PEBP family protein TERM 3106 2747790 - 2747771 - T 100 -7.8 -5.5604 | TTAATGAACAAAAAA GCCTCATC AAAA GAGGAGGC TTAACCACTTATCTA Spea_2271 2749002 - 2747821 - | hypothetical protein TERM 3107 2748021 - 2748033 + g 74 -5.5 -4.5954 | TAAAATTAACAATGC GAGGC GAT GCTTC TTTTGTCTGCTGTGA TERM 3108 2749058 - 2749040 - R 100 -8.2 -5.94713 | ATTGGATAAAAAAAA TCGACCTT TAA AAAGTCGA TTCAAACTAAGTTAT Spea_2272 2751547 - 2749502 - | pentapeptide repeat-containing protein TERM 3109 2752200 - 2752219 + r 74 -4.2 -5.07652 | opp_overlap 2752199 2752200, overlap 2752201 AGCCGAGAATAATAC TGGCACAA TTTG TTGCGCCG TTTTCTTTTGAAACA Spea_2273 2752703 - 2752263 - | hypothetical protein Spea_2274 2753257 - 2752832 - | GCN5-related N-acetyltransferase Spea_2275 2754312 - 2753371 - | hypothetical protein TERM 3110 2754597 - 2754612 + H 70 -3.2 -4.87592 | AATGCCAAAACCATC GCGAGT TTAA AGTCGC TTTTATTATCTCTAA TERM 3111 2755207 - 2755248 + G 80 -5.9 -5.07567 | opp_overlap 2755216 GACTCCCCCCATGAC CCAGCTAAATACGCCCT ATCCGGCC ACGGCGTATTTAACGGG TTTTTTACGCTCTCG Spea_2276 2755175 - 2757103 + | radical SAM domain-containing protein TERM 3112 2757200 - 2757167 - T 70 -8.2 -3.75153 | opp_overlap 2757171, overlap 2757171 TCGTTCTAATCTAAA GCAAGGCCACTTTC ATCTAA GAAAGTGGCCTTTT GTTTATACTGATTGG TERM 3113 2757196 - 2757171 - T 95 -13.4 -3.57106 | opp_overlap 2757171, overlap 2757167 TCTAATCTAAAGCAA GGCCACTTTC ATCTAA GAAAGTGGCC TTTTGTTTATACTGA TERM 3114 2757171 - 2757196 + T 100 -13.4 -5.02323 | opp_overlap 2757171 2757167 TCTAATCTAAAGCAA GGCCACTTTC ATCTAA GAAAGTGGCC TTTTGTTTATACTGA TERM 3115 2757295 - 2757285 - T 85 -4 -5.63236 | ACCTAAAAATAAAAA TATC ACC GATA ACAAGAAAAAACTGG Spea_2277 2758465 - 2757455 - | peptidase S15 Spea_2278 2759069 - 2758794 - | hypothetical protein TERM 3116 2759227 - 2759214 - R 100 -8.1 -5.76633 | TCAGATACAAAAAAA CCAGC TTTC GCTGG CCTACATATAAACTT TERM 3117 2759462 - 2759449 - R 100 -8.1 -5.64274 | TCAGGCACAAAAAAA CCAGC TTTC GCTGG CCTACATATCACATC TERM 3118 2759696 - 2759683 - R 100 -8.1 -6.11644 | TCAGGCAAAAAAAAA CCAGC TTTC GCTGG CCTACATATCACATC TERM 3119 2760812 - 2760781 - R 83 -12.5 -2.53715 | opp_overlap 2760786, overlap 2760786 TCGATCACCAGTAAG CAAAAGAGCCACT TTTATT AGTGGCTCTTTTA AATTCATTGCTGAAC TERM 3120 2760807 - 2760786 - R 90 -10.2 -4.46615 | opp_overlap 2760786, overlap 2760781 CACCAGTAAGCAAAA GAGCCACT TTTATT AGTGGCTC TTTTAAATTCATTGC TERM 3121 2760786 - 2760807 + r 90 -10.2 -4.32201 | opp_overlap 2760786 2760781 CACCAGTAAGCAAAA GAGCCACT TTTATT AGTGGCTC TTTTAAATTCATTGC Spea_2279 2762043 - 2760829 - | major facilitator transporter TERM 3122 2762360 - 2762384 + r 83 -9.4 -3.90464 | gap 1, opp_overlap 2762360, overlap 2762355 ATCACTAATAAAAAA CGGGCA-TTCA ATAC TGAAATGCCCG TTCTATTCTTTCAAC TERM 3123 2762384 - 2762360 - R 100 -9.4 -5.52023 | gap 1, opp_overlap 2762355 2762360 ATCACTAATAAAAAA CGGGCA-TTCA ATAC TGAAATGCCCG TTCTATTCTTTCAAC Spea_2280 2762935 - 2762438 - | hypothetical protein Spea_2281 2763350 - 2763874 + | YdaE TERM 3124 2763898 - 2763876 - T 70 -9.8 -2.59881 | overlap 2763875 GACTCAGTTTATAAG TGGGCGTAGA AAA CCTACGCCCG TTGCACAAGTGCTAC Spea_2282 2764911 - 2763910 - | periplasmic binding protein/LacI transcriptional regulator Spea_2283 2766021 - 2764984 - | monosaccharide-transporting ATPase Spea_2284 2767516 - 2766032 - | ABC transporter related TERM 3125 2766551 - 2766565 + g 71 -7.2 -4.05446 | overlap 2766559 CGCCTGTCTTGGTTG GAGTTT TGT AAACTC TTTATCATTAAAGCA TERM 3126 2766687 - 2766706 + g 88 -3.6 -5.63374 | TCGCCATTCCTGACC TTAAACGA AATA TCGTTGAA TTTTTTTGATGTTAA Spea_2285 2769026 - 2767509 - | xylulokinase Spea_2286 2770064 - 2769030 - | alcohol dehydrogenase TERM 3127 2769417 - 2769459 + g 72 -5.7 -4.4078 | gap 1, opp_overlap 2769425 ATCTTGGGTCAAGCT GTTAACCACGG-TAATGCCT TCAT AGTCATTAACCGTAGCTAAC TTTTCATTGACGACG TERM 3128 2770247 - 2770270 + H 85 -8.4 -4.45253 | opp_overlap 2770247 2770252 TTACACTTAAATCAA TTAAATGTTA TCGA TAACATTTAA TTTCTGTTATTTTGA TERM 3129 2770270 - 2770247 - H 72 -8.4 -3.55866 | opp_overlap 2770247, overlap 2770252 TTACACTTAAATCAA TTAAATGTTA TCGA TAACATTTAA TTTCTGTTATTTTGA Spea_2287 2770396 - 2771385 + | LacI family transcription regulator TERM 3130 2771501 - 2771488 - f 71 -6.7 -4.08216 | CTATGGCCCTGAAAA GCTCA TTAT TGAGC CAGTAGGGGCATAGA Spea_2288 2771705 - 2773315 + | ABC transporter related TERM 3131 2773326 - 2773351 + T 75 -10.3 -3.18383 | CCTAATTGATTATTT CCCTGCACGCC ATCA GGCATGCTGGG TTAATCCATAAAAAT TERM 3132 2773391 - 2773366 - T 100 -16.3 -4.91712 | opp_overlap 2773366 GTTAATCCATAAAAA TGGCGCTAATC TTTT GATTAGCGCCA TTTTTTATGTAAACC TERM 3133 2773366 - 2773391 + T 100 -16.3 -5.36441 | opp_overlap 2773366 GTTAATCCATAAAAA TGGCGCTAATC TTTT GATTAGCGCCA TTTTTTATGTAAACC Spea_2289 2774098 - 2773448 - | hexapaptide repeat-containing transferase Spea_2290 2775009 - 2774152 - | phospholipase A1 TERM 3134 2775239 - 2775223 - R 89 -9.5 -4.30014 | opp_overlap 2775221 TTTAGTAAGTTAAAA TTGAAGC CTG GCTTCAA AAGTATCTATTTCGA TERM 3135 2775356 - 2775339 - R 81 -6.9 -4.78764 | GAAAGTCAGTAAAAA GGAGCCC ATAC AGGCCCC TGAGTAATGAGTTAA Spea_2291 2777381 - 2775396 - | excinuclease ABC subunit B TERM 3136 2777563 - 2777539 - R 75 -9.4 -3.37612 | CTTAACCCCAATCAA GTGCCATCAA AAATA TTGATAGCAC ACCTGCACCTTAGCC Spea_2292 2780669 - 2777679 - | UvrD/REP helicase Spea_2293 2781046 - 2781396 + | hypothetical protein TERM 3137 2781421 - 2781448 + F 70 -2.6 -5.06735 | overlap 2781424 TTTATGCTTAAACAC TTTGATAGCCCC GTAA GGGGTTATCTTG TTTTTATGCTTTATC TERM 3138 2781424 - 2781445 + F 91 -10.9 -4.59919 | overlap 2781421 ATGCTTAAACACTTT GATAGCCCC GTAA GGGGTTATC TTGTTTTTATGCTTT Spea_2294 2781639 - 2782721 + | hypothetical protein TERM 3139 2782757 - 2782782 + F 100 -17.7 -4.4017 | opp_overlap 2782757 CTTCCGCTATCAAAA CAGGCCGCTTA ACGT TAAGCGGCCTG TTTTATGACCATTCA TERM 3140 2782782 - 2782757 - f 100 -17.7 -4.25104 | opp_overlap 2782757 CTTCCGCTATCAAAA CAGGCCGCTTA ACGT TAAGCGGCCTG TTTTATGACCATTCA TERM 3141 2783498 - 2783474 - g 71 -7.1 -4.14541 | CATGAACTACATAAA TACCTGCAGCT TCA AGCCGCCGATA CGTTTAACTTGTGGT Spea_2295 2782955 - 2784538 + | glutathione synthase TERM 3142 2784727 - 2784704 - T 86 -11.8 -3.38316 | opp_overlap 2784704 GTACCAGCTAATTAA GCCACTCAAA CAAA CTTGAGTGGC TTACTAGATTAGCTC TERM 3143 2784704 - 2784727 + T 79 -11.1 -3.22388 | opp_overlap 2784704 GTACCAGCTAATTAA GCCACTCAA ACAAAC TTGAGTGGC TTACTAGATTAGCTC Spea_2296 2787185 - 2784744 - | hypothetical protein TERM 3144 2785874 - 2785887 + g 70 -2.4 -5.02074 | opp_overlap 2785868 CGTTAATCACTCCCA TGGA AGAGCG TCCA TTTTTTGCAAGATCC Spea_2297 2787814 - 2787185 - | hypothetical protein TERM 3145 2787913 - 2787927 + H 88 -7.8 -5.03314 | opp_overlap 2787911 2787913 TTATTGAGCGAAATA TCGGGG AAA CCCTGA TTTTTTCCAAATACA Spea_2298 2787978 - 2791259 + | histidine kinase Spea_2299 2791252 - 2791917 + | two component LuxR family transcriptional regulator TERM 3146 2791929 - 2791906 - f 77 -10.3 -3.33815 | ATTTGCCTCAATGAA GAGCCACAC TAAATG GTGTGGCCC TGACGCTTAAGTTCG TERM 3147 2792214 - 2792196 - f 79 -9.6 -3.6502 | opp_overlap 2792196 2792195 2792198 GAGTGCTCAGGCAAA TATCAGGG ATT CCCCGATA GTTTAGCCCGCTAAA TERM 3148 2793752 - 2793774 + G 70 -9.2 -3.44051 | overlap 2793744 TCAGGATTAGCAGCG CTGTTATGGT CAA ACCATAGCGG TTGTACTGGTACAGA Spea_2300 2792348 - 2794168 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 3149 2794251 - 2794216 - T 87 -6.2 -5.23396 | opp_overlap 2794227, overlap 2794227 AACAATCAACAAAAA TAGCCTAAAAAGCCGC ATTC GCGGCTTTTTTAATTA ATGTGCTTATCAACT TERM 3150 2794227 - 2794240 + T 100 -9.5 -5.31059 | opp_overlap 2794216 2794227 AAAATAGCCTAAAAA GCCGC ATTC GCGGC TTTTTTAATTAATGT TERM 3151 2794240 - 2794227 - T 93 -9.5 -4.69464 | opp_overlap 2794227, overlap 2794216 AAAATAGCCTAAAAA GCCGC ATTC GCGGC TTTTTTAATTAATGT Spea_2301 2795201 - 2794293 - | hypothetical protein TERM 3152 2794685 - 2794670 - G 73 -4.6 -4.8236 | opp_overlap 2794670 2794668, overlap 2794671 CATGCAAAAAAACAA TGCCTG CACA CAGGCC TATTCCTAACATACT TERM 3153 2795623 - 2795641 + G 91 -2.2 -5.84381 | overlap 2795624 ACTTAATCTGCCCTC GCCTTGGC GCC GCCGTGGA TTTTTTTGTTGATGC Spea_2302 2795304 - 2795882 + | hypothetical protein TERM 3154 2796949 - 2796967 + G 72 -3.1 -4.93661 | CTGAAAAGGTAAAGT CCGATCT CGTGA ATATCGG TTTTGTTATTAATGT Spea_2303 2796192 - 2798228 + | hypothetical protein Spea_2304 2798257 - 2799402 + | hypothetical protein Spea_2305 2799563 - 2800672 + | hypothetical protein Spea_2306 2800665 - 2802431 + | hypothetical protein Spea_2307 2802433 - 2804463 + | SMC domain-containing protein Spea_2308 2804463 - 2804831 + | hypothetical protein Spea_2309 2807730 - 2804938 - | sigma-70 region 4 domain-containing protein Spea_2310 2808128 - 2807742 - | hypothetical protein Spea_2311 2809195 - 2808131 - | hypothetical protein Spea_2312 2810114 - 2809332 - | hypothetical protein Spea_2313 2812421 - 2810301 - | type III restriction protein res subunit TERM 3155 2812504 - 2812516 + r 72 -3.5 -5.0916 | AAATACTAATTTGGA TATTT ACT AAATA TTTTTATATTAAAGA Spea_2314 2813660 - 2812791 - | HNH nuclease TERM 3156 2813354 - 2813397 + g 74 -8.2 -3.9392 | opp_overlap 2813384, overlap 2813363 TAATTAGTTCACGTT TGCTGGGGTCTGTATTACTC TTTC GAGCAATGCAGTTTTCAGCA TTATTTAGCGTCCAA TERM 3157 2813363 - 2813388 + g 71 -6.9 -4.17523 | opp_overlap 2813384, overlap 2813354 CACGTTTGCTGGGGT CTGTATTACTC TTTC GAGCAATGCAG TTTTCAGCATTATTT TERM 3158 2813857 - 2813844 - R 76 -4.5 -5.0538 | opp_overlap 2813844 CGCTATCGCAAAAAA CACCC CGAA AGGTG TTTTTTATCAGTCTG TERM 3159 2813844 - 2813857 + r 78 -3.8 -5.29782 | opp_overlap 2813844 CGCTATCGCAAAAAA CACC CCGAAA GGTG TTTTTTATCAGTCTG Spea_2315 2819116 - 2813885 - | hypothetical protein TERM 3160 2816188 - 2816172 - GR 79 -5.1 -5.02074 | overlap 2816173 GCATTCTCGAAAAAA TCTAAGG TCA CCTTAGG GTCAATAATGGTCGT TERM 3161 2816187 - 2816173 - GR 72 -8.6 -3.60762 | overlap 2816172 CATTCTCGAAAAAAT CTAAGG TCA CCTTAG GGTCAATAATGGTCG TERM 3162 2816855 - 2816867 + gr 76 -4.8 -4.74103 | opp_overlap 2816855 GCCTGCATTAAACAG TGCC GAGAA GGCA TTTTTAAATTCACCG TERM 3163 2817933 - 2817945 + gr 78 -5.5 -4.82548 | opp_overlap 2817933 AACACTTTAAACTTA TAGCG TTC CGCTG TTTTCTCTCTTTTTA TERM 3164 2818748 - 2818766 + gr 75 -9.6 -3.36878 | opp_overlap 2818747 2818748 2818750 TTCAGCAGAATTAAT CAGCGTGT CTA ACATGCTG TTGTGGATCACTAGC TERM 3165 2818819 - 2818844 + gr 72 -8.3 -3.58726 | opp_overlap 2818819 CGAATTGCCCAGCAA CTTCATCGCGC AAGT GTGAGATGAAG TTCTCTGTAAAACCA TERM 3166 2819104 - 2819085 - GR 70 -2.2 -5.08824 | opp_overlap 2819094, overlap 2819088 TGTTCAGCTAAAAAA TCATTAAA TTGT TTTAAAGA CATATACTGCATCTC Spea_2316 2820437 - 2819088 - | putative orphan protein Spea_2317 2822035 - 2820440 - | hypothetical protein Spea_2318 2822950 - 2822648 - | hypothetical protein TERM 3167 2823024 - 2823076 + r 71 -5 -4.5815 | gap 1, opp_overlap 2823040 2823043, overlap 2823030 2823035 CTAATTTGCTCTCTA TCGTTTTTAACGCAAAGAACCCAGT TTGT ACTGGGTTCTTTGCTTTGGTT-TGA TTCTTTATTTTTATT TERM 3168 2823030 - 2823071 + r 100 -16.1 -4.2181 | opp_overlap 2823040 2823043, overlap 2823024 2823035 TGCTCTCTATCGTTT TTAACGCAAAGAACCCAGT TTGT ACTGGGTTCTTTGCTTTGG TTTGATTCTTTATTT TERM 3169 2823035 - 2823066 + r 100 -20.4 -4.17109 | opp_overlap 2823040 2823043, overlap 2823030 2823024 TCTATCGTTTTTAAC GCAAAGAACCCAGT TTGT ACTGGGTTCTTTGC TTTGGTTTGATTCTT TERM 3170 2823061 - 2823040 - R 95 -13.1 -3.75153 | opp_overlap 2823035 2823030 2823024, overlap 2823043 CGTTTTTAACGCAAA GAACCCAGT TTGT ACTGGGTTC TTTGCTTTGGTTTGA TERM 3171 2823058 - 2823043 - R 83 -9 -4.0098 | opp_overlap 2823035 2823030 2823024, overlap 2823040 TTTTAACGCAAAGAA CCCAGT TTGT ACTGGG TTCTTTGCTTTGGTT Spea_2319 2824382 - 2823102 - | putative AcnD-accessory protein PrpF Spea_2320 2827267 - 2824628 - | aconitate hydratase TERM 3172 2827031 - 2827015 - G 77 -10.9 -3.28712 | CGGTTTGCCCTAGAA TGTCGTG ACA CACGACA CGGGCTGGATACCAG Spea_2321 2828662 - 2827508 - | 2-methylcitrate synthase/citrate synthase II Spea_2322 2829709 - 2828831 - | 2-methylisocitrate lyase TERM 3173 2829597 - 2829611 + g 76 -4.2 -5.06451 | opp_overlap 2829597, overlap 2829599 CCAGAAAGGTAAATA GCTTGG TGA CCAATC TTTTTTGCCATCATG Spea_2323 2830535 - 2829873 - | GntR family transcriptional regulator TERM 3174 2830070 - 2830095 + g 71 -3.3 -4.77157 | opp_overlap 2830064 GGTGATATATGCCGT CAAACAGCATA GAGA TAAGGTGTTTG TTTTTACTGCCTTGA TERM 3175 2831634 - 2831646 + G 70 -10.5 -2.52896 | opp_overlap 2831628, overlap 2831641 GCCGAAGTATTGAGG GCGGC AAC GCCGC TCAGTTACACACTGG Spea_2324 2830886 - 2833582 + | GCN5-related N-acetyltransferase TERM 3176 2833600 - 2833632 + T 74 -6.4 -4.47786 | opp_overlap 2833604, overlap 2833602 2833604 CTTTCTCAAGCGTAA AAAAGCCATTAAGA CAGAT TCTTAATGGCTCTA TTTATTTAAGTGCTT TERM 3177 2833602 - 2833630 + T 79 -9 -3.83744 | opp_overlap 2833604, overlap 2833600 2833604 TTCTCAAGCGTAAAA AAGCCATTAAGA CAGAT TCTTAATGGCTC TATTTATTTAAGTGC TERM 3178 2833604 - 2833628 + T 88 -11.6 -3.49486 | opp_overlap 2833604, overlap 2833602 2833600 CTCAAGCGTAAAAAA GCCATTAAGA CAGAT TCTTAATGGC TCTATTTATTTAAGT TERM 3179 2833628 - 2833604 - T 95 -11.6 -5.09426 | opp_overlap 2833602 2833600 2833604 CTCAAGCGTAAAAAA GCCATTAAGA CAGAT TCTTAATGGC TCTATTTATTTAAGT Spea_2325 2834753 - 2833701 - | diguanylate cyclase TERM 3180 2834691 - 2834707 + g 78 -6.5 -4.7254 | TTCTGACATTTTTGG TACAGCG TGG CGCAGTA TTTTTGCTGACAGCT TERM 3181 2834823 - 2834809 - R 100 -4.9 -6.23545 | opp_overlap 2834809 TTTAAACAAAAAAAA GGGGC TTGCC ACCCC CTTTTCAAATAAATT Spea_2326 2836499 - 2834856 - | sulfatase TERM 3182 2836648 - 2836622 - R 89 -10.4 -4.17002 | opp_overlap 2836605 2836622 TATCAAACGAAAGAA TGATACATTTTT GCT AAAAACGTATCA TTTGTATCATGCGGA TERM 3183 2836622 - 2836648 + r 75 -8.2 -4.08706 | opp_overlap 2836622, overlap 2836605 TATCAAACGAAAGAA TGATACATTTTT GCT AAAAACGTATCA TTTGTATCATGCGGA Spea_2327 2837260 - 2836841 - | MarR family transcriptional regulator Spea_2328 2838264 - 2837287 - | cation diffusion facilitator family transporter TERM 3184 2837659 - 2837642 - G 72 -6.3 -4.258 | TTACCCATCAATAAA GCTGCTA TTGC TAACAGC GAAGTGAGCGCATCG TERM 3185 2838687 - 2838708 + H 86 -4.5 -5.45802 | opp_overlap 2838687 GACCCCGTTTATAGA GGTATTG AACACAGA CAATACC TTTTTCTTTTGGAGA Spea_2329 2838728 - 2839309 + | ecotin precursor TERM 3186 2839389 - 2839367 - T 73 -9.8 -3.14344 | opp_overlap 2839367 GACGGTTTTTATTAA GCCAGTTGGA ACT CCCGACTGGC TTTTTTATGTACTTC TERM 3187 2839367 - 2839389 + T 100 -11.3 -5.42131 | opp_overlap 2839367 GACGGTTTTTATTAA GCCAGTTGG AACTC CCGACTGGC TTTTTTATGTACTTC Spea_2330 2840091 - 2839363 - | integrase catalytic region TERM 3188 2840208 - 2840241 + r 80 -2.4 -5.64274 | overlap 2840209 ACTTTATGGTGCCTT TTACTTTGGCGAAC CAGAGC GTTCGGCTAAGTAC TTTTTTTCTAAATCG Spea_2331 2840591 - 2840208 - | transposase TERM 3189 2840666 - 2840650 - R 100 -10.9 -5.71712 | opp_overlap 2840650 GTTGACATAAAAAAA GCTACCA ATT TGGTAGC TTTTTTCGTATTTGC TERM 3190 2840650 - 2840666 + r 100 -10.9 -5.32699 | opp_overlap 2840650 GTTGACATAAAAAAA GCTACCA ATT TGGTAGC TTTTTTCGTATTTGC Spea_2332 2841335 - 2840688 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase Spea_2333 2843183 - 2841357 - | phosphogluconate dehydratase TERM 3191 2841748 - 2841758 + g 74 -6.8 -4.25104 | ATGCCGATGGCTTTT GGTC CTT GACC TTTTACTACCACCAC Spea_2334 2843897 - 2843193 - | 6-phosphogluconolactonase Spea_2335 2845404 - 2843908 - | glucose-6-phosphate 1-dehydrogenase Spea_2336 2845696 - 2846550 + | DNA-binding transcriptional regulator HexR TERM 3192 2846570 - 2846599 + F 79 -11.5 -2.7395 | overlap 2846569 CTTTCGACATGATTT TAGGCAGTTCAGC CTAG GCTGAATTGCCCA CTTTCAAAGATATGT Spea_2337 2846735 - 2848171 + | pyruvate kinase TERM 3193 2848216 - 2848232 + T 100 -12.3 -5.67063 | opp_overlap 2848216 TTAGTCAATAAAAAA GGTACGC ATT GCGTACC TTTTTTTATACTCAA TERM 3194 2848232 - 2848216 - T 100 -12.3 -5.4833 | opp_overlap 2848216 TTAGTCAATAAAAAA GGTACGC ATT GCGTACC TTTTTTTATACTCAA Spea_2338 2850538 - 2848256 - | acyl-CoA dehydrogenase Spea_2339 2851191 - 2850544 - | TetR family transcriptional regulator TERM 3195 2851109 - 2851127 + g 71 -7.5 -3.88559 | GTAATTAGTCTTAGT GAGGTTT CTGAA AAACCTC TTTCTGCAAATAATT TERM 3196 2851603 - 2851617 + G 80 -10 -3.87373 | opp_overlap 2851597 CCCAAGATACTGCGG CACTGG CAG CCAGTG TTTCTGAAAAATATA Spea_2340 2851374 - 2853212 + | peptidyl-dipeptidase A TERM 3197 2853298 - 2853262 - T 76 -11.1 -2.50034 | opp_overlap 2853267, overlap 2853267 2853290 GAGTAATGCAAAATC CAAAAGGCTATTTTACT TAA AGTAAAATGGCCTTTTT AAAACCTAAATAAAC TERM 3198 2853293 - 2853267 - T 91 -11 -4.43272 | opp_overlap 2853267, overlap 2853262 2853290 ATGCAAAATCCAAAA GGCTATTTTACT TAA AGTAAAATGGCC TTTTTAAAACCTAAA TERM 3199 2853267 - 2853293 + T 100 -13.2 -4.58395 | opp_overlap 2853267 2853262 2853290 ATGCAAAATCCAAAA GGCTATTTTACT TAA AGTAAAATGGCC TTTTTAAAACCTAAA TERM 3200 2853335 - 2853323 - T 71 -4.1 -4.84353 | overlap 2853325 ATAAACTAAAATAAA GCTAA AAA TCAGC GGACTTTCACCCCTT Spea_2341 2853921 - 2853331 - | Smr protein/MutS2 Spea_2342 2854089 - 2854673 + | hypothetical protein TERM 3201 2854859 - 2854899 + G 76 -4 -4.96848 | gap 1, opp_overlap 2854859 2854857 CTTAAGACGCAAATA GCACAAAATCCCGAGCAGT TAAT GC-GCTCTAGATTTAGTGC TTTTTATCTAAACAA Spea_2343 2854760 - 2855239 + | SecC motif-containing protein TERM 3202 2855333 - 2855347 + T 73 -7.1 -4.0162 | opp_overlap 2855333, overlap 2855329 TTACCCACAGATAGA GCCGA TAAAT TCGGC TTTATCGTATCAAGC Spea_2344 2857558 - 2855384 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 3203 2855875 - 2855861 - G 72 -2.8 -5.03314 | opp_overlap 2855861 2855861, overlap 2855862 GTTACTGCTAAAAAA CTGTCT TGC AGACAC GTTTACGTGCATGGA TERM 3204 2857616 - 2857597 - R 70 -8 -3.76781 | opp_overlap 2857596 2857597 2857599 AAAGAGCTTACCAAA TAGCTTTA AAAT TAAAGCTA ATATATTATTTTTAT Spea_2345 2857973 - 2857686 - | hypothetical protein Spea_2346 2858600 - 2858049 - | hypothetical protein TERM 3205 2859468 - 2859449 - H 71 -5.1 -4.50686 | GTAAAAAGTAACAAA CACAATA GGCCAA TATTGTG AGCAACATGAAGTAA TERM 3206 2860528 - 2860508 - g 75 -9.7 -3.48269 | GCTATCAAAGATTAA CGACCAAAC TGT GTGTGGTCG ACCCTGAAAACTCCG Spea_2347 2859892 - 2860968 + | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 3207 2860986 - 2861012 + T 86 -10.3 -4.09628 | gap 1, opp_overlap 2860986 CTGTCAGATAAAAAA GCCCTTGAGTTC GTAA GAA-TCAAGGGC TTGTTATTTAAACTA TERM 3208 2861012 - 2860986 - T 100 -10.3 -5.36441 | gap 1, opp_overlap 2860986 CTGTCAGATAAAAAA GCCCTTGAGTTC GTAA GAA-TCAAGGGC TTGTTATTTAAACTA Spea_2348 2861757 - 2861089 - | radical SAM domain-containing protein Spea_2349 2861885 - 2862568 + | exsB protein TERM 3209 2862597 - 2862577 - g 80 -9.7 -3.93061 | overlap 2862578 2862580 2862590 ATGCTAAAACTCAAA TTAGGGGCT AAT AGCCCCTAT GGGGTCGCGCTGGTC TERM 3210 2862596 - 2862578 - g 82 -13.2 -2.95113 | overlap 2862577 2862580 2862590 TGCTAAAACTCAAAT TAGGGGCT AAT AGCCCCTA TGGGGTCGCGCTGGT TERM 3211 2862594 - 2862580 - g 75 -11.4 -3.02204 | overlap 2862578 2862577 2862590 CTAAAACTCAAATTA GGGGCT AAT AGCCCC TATGGGGTCGCGCTG Spea_2350 2862562 - 2863164 + | rhomboid family protein TERM 3212 2863190 - 2863214 + T 100 -12.9 -5.30155 | opp_overlap 2863190 GTTAATAATCAAAAA GGAGAGCAAGT TTA ACTGGCTCTCC TTTTTTAATTAATGA TERM 3213 2863214 - 2863190 - T 100 -12.9 -4.99435 | opp_overlap 2863190 GTTAATAATCAAAAA GGAGAGCAAGT TTA ACTGGCTCTCC TTTTTTAATTAATGA Spea_2351 2865256 - 2863253 - | excinuclease ABC subunit B Spea_2352 2867204 - 2869120 + | diguanylate cyclase/phosphodiesterase Spea_2353 2869229 - 2869807 + | Na(+)-translocating NADH-quinone reductase subunit E Spea_2354 2869810 - 2870379 + | electron transport complex, RnfABCDGE type, B subunit TERM 3214 2872731 - 2872741 + G 78 -5.4 -4.86033 | GTAGACAGTGATACT TCAG AAA CTGA TTTTTCTGAACCTTT Spea_2355 2870373 - 2872850 + | electron transport complex protein RnfC TERM 3215 2873675 - 2873693 + G 75 -3 -5.24531 | GCAGCTATTTTCAGG TGCCACCA TGA TTGCGGCA TTTTTTATCGCAACT Spea_2356 2872854 - 2873906 + | electron transport complex, RnfABCDGE type, D subunit Spea_2357 2873937 - 2874560 + | electron transport complex protein RnfG Spea_2358 2874557 - 2875252 + | SoxR-reducing system protein RsxE Spea_2359 2875294 - 2875935 + | endonuclease III TERM 3216 2875984 - 2876038 + F 100 -15.2 -3.18383 | opp_overlap 2875986 2876004, overlap 2875988 2875992 2876004 GGTCATGGATTTACA GACGGACAGCTACAAAAAAAGCCGCT AAA AGCGGCTTTTTTTGTAGCTGTATAAA TTAATACATACAGAT TERM 3217 2876036 - 2875986 - f 100 -22.2 -2.91912 | opp_overlap 2875984 2875988 2875992 2876004, overlap 2876004 TCATGGATTTACAGA CGGACAGCTACAAAAAAAGCCGCT AAA AGCGGCTTTTTTTGTAGCTGTATA AATTAATACATACAG TERM 3218 2875988 - 2876034 + F 100 -27 -2.57244 | opp_overlap 2875986 2876004, overlap 2875984 2875992 2876004 ATGGATTTACAGACG GACAGCTACAAAAAAAGCCGCT AAA AGCGGCTTTTTTTGTAGCTGTA TAAATTAATACATAC TERM 3219 2875992 - 2876030 + F 100 -26.4 -2.95884 | opp_overlap 2875986 2876004, overlap 2875988 2875984 2876004 ATTTACAGACGGACA GCTACAAAAAAAGCCGCT AAA AGCGGCTTTTTTTGTAGC TGTATAAATTAATAC TERM 3220 2876018 - 2876004 - f 100 -11.4 -5.65177 | opp_overlap 2875992 2875988 2875984 2876004, overlap 2875986 ACAGCTACAAAAAAA GCCGCT AAA AGCGGC TTTTTTTGTAGCTGT TERM 3221 2876004 - 2876018 + F 100 -11.4 -5.65177 | opp_overlap 2876004 2875986, overlap 2875992 2875988 2875984 ACAGCTACAAAAAAA GCCGCT AAA AGCGGC TTTTTTTGTAGCTGT Spea_2360 2876595 - 2877005 + | lactoylglutathione lyase TERM 3222 2876993 - 2877009 + T 79 -5.1 -5.02074 | opp_overlap 2876993 GAGTTCGGCTGAAAA CGGTTTA GGT TAATCCG TTTTTTAAGCAATAA TERM 3223 2877022 - 2877050 + T 71 -9.8 -2.8806 | gap 1, opp_overlap 2877022 2877029, overlap 2877029 CCGTTTTTTAAGCAA TAAAAAA-GCGCC CTAA GGCGCTTTTTTTA TGTCTAAAACCGTTT TERM 3224 2877049 - 2877022 - T 85 -11.4 -3.33696 | opp_overlap 2877022 2877029, overlap 2877029 CCGTTTTTTAAGCAA TAAAAAAGCGCC CTAA GGCGCTTTTTTT ATGTCTAAAACCGTT TERM 3225 2877029 - 2877042 + T 100 -9.5 -5.76633 | opp_overlap 2877029 2877022, overlap 2877022 TTAAGCAATAAAAAA GCGCC CTAA GGCGC TTTTTTTATGTCTAA TERM 3226 2877042 - 2877029 - T 100 -9.5 -5.5604 | opp_overlap 2877022 2877029, overlap 2877022 TTAAGCAATAAAAAA GCGCC CTAA GGCGC TTTTTTTATGTCTAA Spea_2361 2879673 - 2877064 - | TonB-dependent receptor Spea_2362 2881564 - 2880551 - | Holliday junction DNA helicase B Spea_2363 2882191 - 2881574 - | Holliday junction DNA helicase RuvA TERM 3227 2881823 - 2881833 + g 79 -2.4 -5.47218 | opp_overlap 2881823 CATTTCGACCAATAA GCGC TCG GCGG TTTTTTTACCTACGC Spea_2364 2882709 - 2882188 - | crossover junction endodeoxyribonuclease RuvC TERM 3228 2882442 - 2882426 - G 73 -11.5 -2.63631 | opp_overlap 2882416 2882424 2882426 GCAACGGGCAGATTA GCCGCGG TTG CCGCGAC GATAGCTGCGCCTCT Spea_2365 2883460 - 2882717 - | hypothetical protein TERM 3229 2882769 - 2882795 + g 73 -9.6 -3.35679 | opp_overlap 2882767 2882781 GCGTTGTGATACACC TCTTGAACATCA TCA TGATCTTCAAGA TTATCAATCAAACGA TERM 3230 2882840 - 2882816 - G 79 -10.7 -3.51804 | opp_overlap 2882813, overlap 2882812 AATCAAACGAAGGAA TTTAGGCGCGG TAT CCGCGTCCAAA TCGGCTTTTGTCGAT TERM 3231 2883547 - 2883584 + r 71 -4.1 -4.97957 | opp_overlap 2883557, overlap 2883555 2883557 TTGGGTATATTTTAC CGAAAAAAAAGCCGAGT CTTA ACTCGGCTCTTTATGGG TTTTATTATTCTGTG TERM 3232 2883555 - 2883576 + r 79 -8.7 -4.08689 | opp_overlap 2883557, overlap 2883547 2883557 ATTTTACCGAAAAAA AAGCCGAGT CTTA ACTCGGCTC TTTATGGGTTTTATT TERM 3233 2883557 - 2883574 + r 88 -11.3 -3.61601 | opp_overlap 2883557, overlap 2883555 2883547 TTTACCGAAAAAAAA GCCGAGT CTTA ACTCGGC TCTTTATGGGTTTTA TERM 3234 2883574 - 2883557 - R 100 -11.3 -5.81412 | opp_overlap 2883555 2883547 2883557 TTTACCGAAAAAAAA GCCGAGT CTTA ACTCGGC TCTTTATGGGTTTTA Spea_2366 2885383 - 2883590 - | aspartyl-tRNA synthetase TERM 3235 2885025 - 2885039 + g 72 -2.8 -4.91459 | overlap 2885016 TTTAAACGCTGCTCT TCAGTG TTA TGCTGA TTTTTGTCCATGTTG Spea_2367 2888325 - 2885554 - | diguanylate cyclase TERM 3236 2887794 - 2887812 + g 79 -11.8 -3.28712 | opp_overlap 2887810 TAGTGTTGTTAATTT GGCTTTCT CTT AGAAAGCC TTCTAAGCCCACAAA Spea_2368 2888514 - 2889245 + | putative methyltransferase Spea_2369 2889242 - 2890234 + | putative methyltransferase TERM 3237 2890997 - 2890984 - g 71 -3.8 -4.8236 | CATGGAAAAAAACAA GACG CTCAGC CGTC TAAGACAAAAAAATA Spea_2370 2890258 - 2891013 + | hypothetical protein Spea_2371 2891025 - 2892533 + | gonadoliberin III-related protein TERM 3238 2892690 - 2892713 + GF 73 -10.4 -2.87344 | gap 1, opp_overlap 2892688 2892687 TTGCTAATAATATCG CCGTACCCGAT TTA ATCGG-TACGG TGTGTGAGCAGCATG Spea_2372 2892533 - 2893483 + | alpha-L-glutamate ligase-like protein TERM 3239 2893537 - 2893554 + GF 83 -12.7 -2.91681 | opp_overlap 2893537 TTTGTTGGTTTAACA CGGCAGC TCTG GCTGCCG TGTCTCCAATTCCGC TERM 3240 2893554 - 2893537 - gf 84 -12.7 -3.01712 | opp_overlap 2893537 TTTGTTGGTTTAACA CGGCAGC TCTG GCTGCCG TGTCTCCAATTCCGC TERM 3241 2893588 - 2893613 + GF 93 -12 -3.78775 | opp_overlap 2893588 2893584 TTGTCGAACAATGTA TGGCTTATCG TTTTCC CGATAAGCCA TTTAATCATGCAAGC TERM 3242 2893613 - 2893588 - gf 81 -12 -2.6563 | opp_overlap 2893588, overlap 2893584 TTGTCGAACAATGTA TGGCTTATCG TTTTCC CGATAAGCCA TTTAATCATGCAAGC Spea_2373 2893452 - 2895194 + | peptidase M3A and M3B, thimet/oligopeptidase F Spea_2374 2895139 - 2896233 + | hypothetical protein TERM 3243 2896271 - 2896302 + T 100 -16.8 -2.90901 | opp_overlap 2896271 2896259, overlap 2896278 2896280 TAATATCTAACATAA CTAGATAGGGCTCA AACC TGAGCTCTATCTAG TCTCATTAAGCATGT TERM 3244 2896302 - 2896271 - T 100 -14.6 -3.71517 | opp_overlap 2896271 2896278 2896280, overlap 2896259 TAATATCTAACATAA CTAGATAGGGCTCA AACC TGAGCTCTATCTAG TCTCATTAAGCATGT Spea_2375 2898793 - 2896373 - | histidine kinase Spea_2376 2899200 - 2898952 - | methyl-accepting chemotaxis protein Spea_2377 2899423 - 2899785 + | response regulator receiver protein Spea_2378 2901460 - 2900354 - | thiamine biosynthesis protein ThiH Spea_2379 2902252 - 2901488 - | thiazole biosynthesis family protein Spea_2380 2902487 - 2902254 - | thiamine biosynthesis protein ThiS Spea_2381 2903316 - 2902480 - | UBA/THIF-type NAD/FAD binding protein TERM 3245 2903297 - 2903285 - G 83 -6.3 -5.06451 | GAGTATCGTAAAAAA TCACT ATC AGTGA GTGACATACTATTTC Spea_2382 2904898 - 2903306 - | phosphomethylpyrimidine kinase TERM 3246 2904808 - 2904787 - G 71 -9.5 -3.14211 | AGGCGTGGGCATCAA GATCTGACA TTGT TGCCAGATC CGCTTGAATGCCTGC Spea_2383 2906904 - 2904901 - | thiamine biosynthesis protein ThiC TERM 3247 2906280 - 2906297 + g 72 -5.5 -4.38927 | opp_overlap 2906280 TGTTTAGAGGAATAA TTGCGCG GCCA CGAGCAA TTTCTTGTCTGACAA TERM 3248 2906343 - 2906318 - G 83 -14.1 -2.70354 | overlap 2906315 2906314 TGTCTGACAAATTCA GCGGTAATTGG CTCG CCAATCACCGC GCCAAAGCTCTCACC Spea_2384 2908291 - 2907380 - | hypothetical protein TERM 3249 2907417 - 2907439 + g 79 -4 -5.11033 | overlap 2907416 CGCTTGTTTAATCTT GCGGCTATCG CAT CGTTAATCGC TTTTTTAACCTTATC Spea_2385 2908535 - 2909284 + | hemolysin III family channel protein Spea_2386 2909859 - 2909344 - | DTW domain-containing protein TERM 3250 2910048 - 2910027 - R 100 -10.1 -5.37593 | opp_overlap 2910027 GCTTAAAGCAAAAAA GCGCCCCTC AGGT AAGGGACGC TTTTTTTTGAACCAT TERM 3251 2910027 - 2910048 + r 100 -7.2 -5.75945 | opp_overlap 2910027 GCTTAAAGCAAAAAA GCGCCCCT CAGGTA AGGGACGC TTTTTTTTGAACCAT Spea_2387 2910628 - 2910137 - | peptide deformylase TERM 3252 2910966 - 2910982 + G 79 -4.3 -5.25893 | overlap 2910952 TGGAGATCTTTGAAC GCCTTGC TTG GTATGGC TTTTTTGCTCTCTCT TERM 3253 2911069 - 2911081 + G 76 -9.1 -3.81089 | GCGTGGCTTATTGCA GGGGA TGA TCCCC TTCTTCCTCTATCTA Spea_2388 2910896 - 2912617 + | major facilitator transporter TERM 3254 2912744 - 2912690 - T 100 -17.5 -3.04715 | gap 1, opp_overlap 2912703, overlap 2912703 TAGGCCCCTTAAAAC CAGACGTAGAAAATAGCCCGCGTAAG TAAA CTTACACGGGCTATTTTTTGC-TCTG AGATTCAATTATGAA TERM 3255 2912732 - 2912703 - T 100 -17.3 -4.45485 | opp_overlap 2912703, overlap 2912690 ACCAGACGTAGAAAA TAGCCCGCGTAAG TAAA CTTACACGGGCTA TTTTTTGCTCTGAGA TERM 3256 2912703 - 2912732 + T 100 -15.1 -5.21709 | opp_overlap 2912703 2912690 ACCAGACGTAGAAAA TAGCCCGCGTAAG TAAA CTTACACGGGCTA TTTTTTGCTCTGAGA Spea_2389 2913460 - 2912789 - | hypothetical protein Spea_2390 2913671 - 2914024 + | methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding Spea_2391 2914046 - 2914831 + | hypothetical protein TERM 3257 2914887 - 2914863 - T 100 -14.3 -5.46657 | opp_overlap 2914863 CATGCCAATAAAAAA GCTCGCTAGGT TTA ACCTTGCGAGC TTTTTATTTTCTAGC TERM 3258 2914863 - 2914887 + T 100 -14.3 -5.54907 | opp_overlap 2914863 CATGCCAATAAAAAA GCTCGCTAGGT TTA ACCTTGCGAGC TTTTTATTTTCTAGC Spea_2392 2915694 - 2914909 - | glutamine amidotransferase class-II Spea_2393 2915939 - 2918386 + | acyl-CoA dehydrogenase TERM 3259 2918413 - 2918434 + T 100 -11.7 -5.95286 | opp_overlap 2918413 AAGCACGCAGTAAAA GGCTTAAGT ATTC ACTTAAGCC TTTTTTATTTTTCAT TERM 3260 2918434 - 2918413 - T 95 -11.7 -4.29396 | opp_overlap 2918413 AAGCACGCAGTAAAA GGCTTAAGT ATTC ACTTAAGCC TTTTTTATTTTTCAT Spea_2394 2919827 - 2918541 - | coproporphyrinogen dehydrogenase Spea_2395 2920587 - 2920216 - | hypothetical protein TERM 3261 2920352 - 2920362 + g 91 -8.2 -4.96848 | TGACGGATTTCGCGG CGCG CTT CGCG TTTTTCTCTGGCGAC Spea_2396 2920958 - 2920584 - | hypothetical protein TERM 3262 2921192 - 2921212 + r 71 -6.8 -4.10552 | opp_overlap 2921193, overlap 2921193 2921195 TGTCGACATAGAAAA ACACTGGC AGATA GCCAGTGC TTTAGTTTCATCGCC TERM 3263 2921193 - 2921211 + r 75 -10.3 -3.05849 | opp_overlap 2921193, overlap 2921192 2921195 GTCGACATAGAAAAA CACTGGC AGATA GCCAGTG CTTTAGTTTCATCGC TERM 3264 2921211 - 2921193 - R 93 -10.3 -5.03994 | opp_overlap 2921192 2921193 2921195 GTCGACATAGAAAAA CACTGGC AGATA GCCAGTG CTTTAGTTTCATCGC TERM 3265 2921355 - 2921383 + r 89 -5.9 -5.52079 | opp_overlap 2921355 2921360 TCTCTGATGGCTAAA GAGAACAAAAGCC CAT GGCTCCTGTCCTC TTTTTATTTTACTGT TERM 3266 2921383 - 2921355 - R 90 -12.5 -3.57144 | opp_overlap 2921355, overlap 2921360 TCTCTGATGGCTAAA GAGAACAAAAGCC CAT GGCTCCTGTCCTC TTTTTATTTTACTGT TERM 3267 2921378 - 2921360 - R 71 -7.4 -3.82202 | opp_overlap 2921355, overlap 2921355 GATGGCTAAAGAGAA CAAAAGCC CAT GGCTCCTG TCCTCTTTTTATTTT Spea_2397 2922684 - 2921392 - | putative serine transporter TERM 3268 2922385 - 2922364 - G 80 -9.5 -3.88114 | overlap 2922362 AATAGCAAAGAAATA GAGTAAGGT GATG ACCTTACCC ATGCCTACACCAAAA TERM 3269 2923141 - 2923116 - H 77 -6.1 -4.48987 | opp_overlap 2923118 2923119 2923134, overlap 2923118 2923119 2923135 CTCTCATAAGTAAAA GATCCACCTTC TGAA GAAGGTGGCTT TGCCCATCTGTTATA TERM 3270 2923139 - 2923118 - H 77 -8.7 -3.85296 | opp_overlap 2923118 2923119 2923134, overlap 2923116 2923119 2923135 CTCATAAGTAAAAGA TCCACCTTC TGAA GAAGGTGGC TTTGCCCATCTGTTA TERM 3271 2923118 - 2923139 + H 72 -8.7 -3.60948 | opp_overlap 2923118 2923116 2923119 2923135, overlap 2923119 2923134 CTCATAAGTAAAAGA TCCACCTTC TGAA GAAGGTGGC TTTGCCCATCTGTTA TERM 3272 2923119 - 2923138 + H 81 -12.2 -2.76087 | opp_overlap 2923119 2923118 2923116 2923135, overlap 2923118 2923134 TCATAAGTAAAAGAT CCACCTTC TGAA GAAGGTGG CTTTGCCCATCTGTT TERM 3273 2923138 - 2923119 - H 81 -12.2 -2.90455 | opp_overlap 2923118 2923119 2923134, overlap 2923118 2923116 2923135 TCATAAGTAAAAGAT CCACCTTC TGAA GAAGGTGG CTTTGCCCATCTGTT TERM 3274 2923164 - 2923178 + H 73 -10 -2.84602 | opp_overlap 2923159 2923164, overlap 2923163 CTGTTATAAAGCAGA CTCCCT AAA AGGGAG CTTTCCTACCGTGCG TERM 3275 2923178 - 2923164 - H 75 -10 -3.05997 | opp_overlap 2923164 2923163, overlap 2923159 CTGTTATAAAGCAGA CTCCCT AAA AGGGAG CTTTCCTACCGTGCG TERM 3276 2923293 - 2923277 - H 71 -9.5 -2.88023 | opp_overlap 2923277, overlap 2923276 GCACTATTAGCAAAG CTCAAGT ATC ACTTGAG TTAATAAGCTATATT TERM 3277 2923277 - 2923293 + H 73 -9.5 -3.18507 | opp_overlap 2923277 2923276 GCACTATTAGCAAAG CTCAAGT ATC ACTTGAG TTAATAAGCTATATT TERM 3278 2924229 - 2924245 + G 73 -9.5 -3.41581 | opp_overlap 2924229 2924228 2924231 CAATATCAAGGAAAC TAGACTC GCA GAGTCTA TTGATTCATGGATTA TERM 3279 2924245 - 2924229 - g 70 -9.5 -2.99558 | opp_overlap 2924229, overlap 2924228 2924231 CAATATCAAGGAAAC TAGACTC GCA GAGTCTA TTGATTCATGGATTA TERM 3280 2924444 - 2924434 - g 79 -4.6 -5.10665 | ATGGAACAAAGAAAA GCCG AAT CAGC AAGTGCGGCAACTAT Spea_2398 2923555 - 2925525 + | methyl-accepting chemotaxis sensory transducer TERM 3281 2925568 - 2925533 - T 83 -9.3 -4.07306 | opp_overlap 2925533 AGATGTAACCAGAAA TACTGACTTAATTAA AGTATG TAAATTAAGTCAGTA TTCATCGCTAGCTAG TERM 3282 2925533 - 2925568 + T 70 -9.3 -3.18912 | opp_overlap 2925533 AGATGTAACCAGAAA TACTGACTTAATTAA AGTATG TAAATTAAGTCAGTA TTCATCGCTAGCTAG Spea_2399 2926629 - 2925949 - | hypothetical protein TERM 3283 2926924 - 2926886 - R 82 -11.3 -3.22114 | gap 1, opp_overlap 2926894, overlap 2926889 2926894 CATACCACACTAACA GAATTAGATTCGGCCTTC ACAG GAAGACCGAAT-TAACTC AATAAATCAACTCTA TERM 3284 2926921 - 2926889 - R 79 -9.4 -3.74383 | gap 1, opp_overlap 2926894, overlap 2926886 2926894 ACCACACTAACAGAA TTAGATTCGGCCTTC ACAG GAAGACCGAAT-TAA CTCAATAAATCAACT TERM 3285 2926917 - 2926894 - R 82 -11.8 -3.02549 | opp_overlap 2926894, overlap 2926889 2926886 ACTAACAGAATTAGA TTCGGCCTTC ACAG GAAGACCGAA TTAACTCAATAAATC TERM 3286 2926894 - 2926917 + r 72 -9.6 -3.08133 | opp_overlap 2926894 2926889 2926886 ACTAACAGAATTAGA TTCGGCCTTC ACAG GAAGACCGAA TTAACTCAATAAATC Spea_2400 2928856 - 2926979 - | sodium/hydrogen exchanger TERM 3287 2928876 - 2928893 + r 73 -8.5 -3.67877 | overlap 2928874 TATTTCCTTATCTGA TCGTTTC TATT GAAACGA TGTTTGTTAAAACAT TERM 3288 2929430 - 2929377 - R 100 -16.3 -4.84363 | opp_overlap 2929386 2929393, overlap 2929393 CCAAACCAGCAAAAA CAACAAAACGAAAAAAGCCCTTACA TTGC TGTAAGGGCTTTCGTCTTTGTGTTG GCGGAGCGGACGGGA TERM 3289 2929386 - 2929421 + r 95 -12 -4.1891 | opp_overlap 2929377 2929393, overlap 2929393 CAAAAACAACAAAAC GAAAAAAGCCCTTACA TTGC TGTAAGGGCTTTCGTC TTTGTGTTGGCGGAG TERM 3290 2929393 - 2929414 + r 100 -13.1 -4.07089 | opp_overlap 2929377 2929393, overlap 2929386 AACAAAACGAAAAAA GCCCTTACA TTGC TGTAAGGGC TTTCGTCTTTGTGTT TERM 3291 2929414 - 2929393 - R 100 -13.1 -5.52347 | opp_overlap 2929393 2929386, overlap 2929377 AACAAAACGAAAAAA GCCCTTACA TTGC TGTAAGGGC TTTCGTCTTTGTGTT Spea_2401 2931472 - 2930138 - | hypothetical protein TERM 3292 2931324 - 2931339 + g 70 -9 -3.30903 | opp_overlap 2931324, overlap 2931314 2931336 AGCAGTGTCATAGAA TCGACC ATGT GGTCGA TTCTAAACCGATTTT TERM 3293 2931339 - 2931324 - G 72 -9 -3.49653 | opp_overlap 2931324 2931314 2931336 AGCAGTGTCATAGAA TCGACC ATGT GGTCGA TTCTAAACCGATTTT Spea_2402 2932211 - 2931483 - | DNA polymerase III, epsilon subunit TERM 3294 2931732 - 2931711 - G 71 -9.5 -3.19463 | gap 1, opp_overlap 2931709 CTCAGCATCGAGTAA TGCGCCGTGA AGA TCACGG-GCA GAGTTATCGATACCG TERM 3295 2932010 - 2932043 + g 71 -10.3 -2.62889 | overlap 2932009 TGGTAATACCATGGA CCGCGATAGCCTCTT CATC GATAGGCTGTTGCGG ATTAATGTATTCATG Spea_2403 2932212 - 2932769 + | ribonuclease H TERM 3296 2932781 - 2932813 + T 93 -11.3 -4.33258 | opp_overlap 2932779 2932789, overlap 2932805 CTAATAATAAACTCG GCCTAGAACCTGTCA CGC TGGCTGGTTCTAAGC TTTATCTTTAGAACT Spea_2404 2933738 - 2932842 - | LysR family transcriptional regulator Spea_2405 2934487 - 2933747 - | methyltransferase type 11 TERM 3297 2934395 - 2934379 - G 78 -5.1 -5.04356 | overlap 2934372 2934381 TGAAATAACCAAAAA TTCTTGG CCA CCAAGGA GATAAAGCCTGCTCT TERM 3298 2934431 - 2934402 - G 76 -8.5 -4.14541 | CACCAAGGAGATAAA GCCTGCTCTACGC TTTG GCGTATAACGGGC CCATTCGGGAGTTCT TERM 3299 2935245 - 2935229 - g 83 -2.2 -5.74122 | GATTACACAAAAAAA GCCCAA GCCCT TCGAGC TCAAAATCTGCCGAC Spea_2406 2934626 - 2935417 + | hydroxyacylglutathione hydrolase TERM 3300 2935458 - 2935472 + F 89 -5.7 -5.42259 | TCTAGCGCCACTAGG CCAGA TTTAC TCTGG TTTTTTTGAGCCTAA Spea_2407 2935508 - 2937067 + | lytic transglycosylase catalytic TERM 3301 2937102 - 2937086 - T 100 -13.7 -5.18357 | opp_overlap 2937086 GAACCCATTAAAAAA GGCGACC TTA GGTCGCC TTTTTTATAGCTATG TERM 3302 2937086 - 2937102 + T 100 -13.7 -5.29782 | opp_overlap 2937086 GAACCCATTAAAAAA GGCGACC TTA GGTCGCC TTTTTTATAGCTATG Spea_2408 2937695 - 2937132 - | intracellular proteinase inhibitor domain-containing protein Spea_2409 2939533 - 2937695 - | AsmA family protein TERM 3303 2939084 - 2939116 + g 71 -6.9 -4.09511 | overlap 2939086 2939112 TAGCCGTGCTAGCGT GGCATGACTCGAAGC CGT GTTTTGTGTCGCGCC TTTTGAGACGCTCTT TERM 3304 2939585 - 2939575 - R 71 -4 -4.84761 | overlap 2939561 2939578 AGACTTTTATAAAAA TCAT ATA ATGA GCCTTTATAAAGCGT Spea_2410 2940115 - 2939618 - | regulator of ribonuclease activity A Spea_2411 2940303 - 2940620 + | hypothetical protein TERM 3305 2940831 - 2940815 - T 71 -7.3 -3.87318 | AACGACTACAGCAAA CGAATGA TGC CCATTCG ATAACAAATTGATTT Spea_2412 2941785 - 2941156 - | putative sulfite oxidase subunit YedZ Spea_2413 2942852 - 2941830 - | putative sulfite oxidase subunit YedY TERM 3306 2942659 - 2942672 + g 80 -5.9 -4.93968 | overlap 2942662 AAGGGTAACGCCTTG GTGGC AAAA GCCGC TTTTTGCTTATCACT TERM 3307 2943175 - 2943165 - g 86 -3.2 -5.64006 | ATTTAATCAAAAAAA GACC CGT AGTC GATGGGAGCAAGCAC Spea_2414 2943067 - 2944590 + | hypothetical protein Spea_2415 2944618 - 2946549 + | lytic transglycosylase catalytic Spea_2416 2946946 - 2947857 + | ATPase Spea_2417 2947930 - 2948946 + | hypothetical protein TERM 3308 2950959 - 2950924 - g 70 -4.8 -4.42653 | gap 1 AGCGCAGCCATAAAA GCTTCTCTCGATTACTT ATC AAGCAATCGAGATG-GC TAAAAATCAATATCG Spea_2418 2948943 - 2951012 + | transglutaminase domain-containing protein TERM 3309 2951341 - 2951326 - g 76 -9 -3.81488 | TGTGCCTAAAGAGAA CGCCTT CACT AAGGCG GCAATGACTTGGAAG TERM 3310 2952615 - 2952588 - g 82 -7.1 -4.76041 | gap 1, opp_overlap 2952586 2952588 2952609 TACACCTATTAAAAA TCAATCAGAGCC GCTTT GGC-CTGACTGA TATTATCAGCATTTT Spea_2419 2951072 - 2954881 + | exodeoxyribonuclease V, gamma subunit TERM 3311 2955600 - 2955576 - g 83 -10.1 -4.13767 | GTCGCCAGTCCAAAA CCTCAAGCCTT TGA AAAACTTGAGG CTGAACTAAGCCAGA TERM 3312 2957093 - 2957076 - g 71 -3.3 -4.7373 | opp_overlap 2957084, overlap 2957077 CTATTGCAGCAAAAA GCCACCG AGCT CGATGGT AGCAGCGCGCTTATC Spea_2420 2954883 - 2958599 + | exodeoxyribonuclease V, beta subunit Spea_2421 2958596 - 2960590 + | exodeoxyribonuclease V, alpha subunit Spea_2422 2960862 - 2961866 + | D-alanyl-alanine synthetase A TERM 3313 2961953 - 2961976 + T 100 -13.2 -5.27923 | opp_overlap 2961955 TGACGGTTTTTACTA GACCAGTAGC TTCT GCTGCTGGTC TTTTTTATGCACTTG Spea_2423 2962702 - 2961950 - | integrase catalytic region TERM 3314 2962059 - 2962048 - G 72 -3 -4.9792 | CATTGTATATAAAAA TTGA CTCC TCAA CGAGTTGCTTTAACT TERM 3315 2962446 - 2962433 - G 72 -6.7 -4.28111 | opp_overlap 2962432 TATATCACTAACAAA CACCT CTTC AGGTG CTGTTGGCACTAACT Spea_2424 2963184 - 2962786 - | transposase TERM 3316 2963219 - 2963191 - R 86 -9.8 -3.97947 | gap 1, opp_overlap 2963199 TGTAGTCATTATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACACCTTAAATA TERM 3317 2963265 - 2963235 - R 100 -17 -3.4096 | opp_overlap 2963240, overlap 2963240 AAGACACCTTAAATA CAAAAGCCAGCGCA ATA TGCGCTGGCTTTTT AGTTTCAAGCTATTG TERM 3318 2963260 - 2963240 - R 100 -16.9 -4.79451 | opp_overlap 2963240, overlap 2963235 ACCTTAAATACAAAA GCCAGCGCA ATA TGCGCTGGC TTTTTAGTTTCAAGC TERM 3319 2963240 - 2963260 + r 100 -16.9 -4.98531 | opp_overlap 2963240 2963235 ACCTTAAATACAAAA GCCAGCGCA ATA TGCGCTGGC TTTTTAGTTTCAAGC Spea_2425 2963893 - 2963294 - | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome Spea_2426 2964387 - 2963902 - | nitrate reductase cytochrome c-type subunit (NapB) TERM 3320 2964098 - 2964064 - G 74 -11.4 -2.87132 | opp_overlap 2964058 2964075 2964076 CTCGCGGTCCATATA GTGAGTCACGCTCACC ATA GGTGCTTGTGACTCAC CCGTGCGGCTACGGT Spea_2427 2966889 - 2964400 - | nitrate reductase Spea_2428 2967149 - 2966892 - | NapD family protein Spea_2429 2967348 - 2967190 - | periplasmic nitrate reductase NapE TERM 3321 2967823 - 2967813 - R 74 -4 -5.10968 | opp_overlap 2967813 ACTAATAGAGAAAAA CAAA CTT TTTG TTTTCAGCCCTAAAC TERM 3322 2967838 - 2967857 + r 89 -12.2 -3.44319 | opp_overlap 2967838 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 3323 2967857 - 2967838 - R 89 -12.2 -3.57144 | opp_overlap 2967838 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 3324 2968160 - 2968144 - R 74 -6.5 -4.40358 | opp_overlap 2968142 2968144 2968145, overlap 2968145 ACGCACGGTAGAAAA GCTCCCT TTT AGGGAGT CTACTTTTATAACAG TERM 3325 2968145 - 2968159 + r 75 -10 -3.14587 | opp_overlap 2968144 2968145, overlap 2968144 2968142 CGCACGGTAGAAAAG CTCCCT TTT AGGGAG TCTACTTTTATAACA TERM 3326 2968159 - 2968145 - R 75 -10 -3.23733 | opp_overlap 2968145 2968144 2968142, overlap 2968144 CGCACGGTAGAAAAG CTCCCT TTT AGGGAG TCTACTTTTATAACA TERM 3327 2968183 - 2968208 + r 80 -6.1 -4.74012 | opp_overlap 2968175 2968185 2968186, overlap 2968178 2968185 2968186 TATAACAGATGGGCA AAGCCACCTTC TTCA GAAGGTGGATC TTTTACTTTTATCAT TERM 3328 2968206 - 2968185 - R 72 -8.7 -3.60948 | opp_overlap 2968178 2968185 2968183 2968186, overlap 2968175 2968186 TAACAGATGGGCAAA GCCACCTTC TTCA GAAGGTGGA TCTTTTACTTTTATC TERM 3329 2968185 - 2968206 + r 79 -8.7 -3.96876 | opp_overlap 2968175 2968185 2968186, overlap 2968178 2968183 2968186 TAACAGATGGGCAAA GCCACCTTC TTCA GAAGGTGGA TCTTTTACTTTTATC TERM 3330 2968205 - 2968186 - R 81 -12.2 -2.76087 | opp_overlap 2968178 2968185 2968183 2968186, overlap 2968175 2968185 AACAGATGGGCAAAG CCACCTTC TTCA GAAGGTGG ATCTTTTACTTTTAT TERM 3331 2968186 - 2968205 + r 82 -12.2 -2.96499 | opp_overlap 2968175 2968186 2968185, overlap 2968178 2968185 2968183 AACAGATGGGCAAAG CCACCTTC TTCA GAAGGTGG ATCTTTTACTTTTAT TERM 3332 2968240 - 2968259 + r 82 -8.5 -4.21974 | opp_overlap 2968240 TAATGATTAAAAAAA CGCGCGG CGTTAA CCGTGCG TTTCTTCAGTGCTAA TERM 3333 2968259 - 2968240 - R 100 -7 -5.58074 | opp_overlap 2968240 TAATGATTAAAAAAA CGCGCGGC GTTA ACCGTGCG TTTCTTCAGTGCTAA Spea_2430 2972180 - 2968293 - | ATP-dependent helicase HrpA TERM 3334 2968771 - 2968795 + g 77 -9.3 -3.85817 | AGCTCCTGCCTTACC CAGTCTTTGGC CTC GGCAAAGGCTG TTTCTGAACGAACGT TERM 3335 2969709 - 2969731 + g 79 -2.6 -5.40474 | opp_overlap 2969714, overlap 2969714 ACGCTCGAAATCGAG CAAATCAGGC GTT GTCTGCTTAG TTTTTTTCCACCACT Spea_2431 2972799 - 2972383 - | signal transduction protein Spea_2432 2973544 - 2972942 - | hypothetical protein TERM 3336 2973794 - 2973820 + r 70 -8 -3.75229 | opp_overlap 2973799, overlap 2973799 TAGGGCTGAAAACAA AAAAACCGAGGC TAG GCATCGGTTTTA TTTAAATCTAATTTA TERM 3337 2973799 - 2973815 + r 86 -7.9 -4.92385 | opp_overlap 2973799, overlap 2973794 CTGAAAACAAAAAAA CCGAGGC TAG GCATCGG TTTTATTTAAATCTA TERM 3338 2973815 - 2973799 - R 100 -7.9 -6.09196 | opp_overlap 2973794 2973799 CTGAAAACAAAAAAA CCGAGGC TAG GCATCGG TTTTATTTAAATCTA Spea_2433 2974291 - 2973836 - | xanthine-guanine phosphoribosyltransferase Spea_2434 2974917 - 2974579 - | hypothetical protein TERM 3339 2975083 - 2975049 - R 75 -8 -4.12942 | gap 1 CTAAAGCGTGTAAAA GCGCAC-CAAGCTCA GAATAG TGAACTTAAGTGCGC GTCGTCATAGATAAA Spea_2435 2976212 - 2975127 - | asparaginase TERM 3340 2976760 - 2976750 - g 80 -6.8 -4.58395 | CCGATCTTTGAAAAA TGGC TCA GCCA ATTAAAAGTCAGGCC Spea_2436 2976381 - 2978207 + | surface antigen (D15) Spea_2437 2978204 - 2982265 + | hypothetical protein TERM 3341 2982310 - 2982336 + T 70 -8.1 -3.73224 | opp_overlap 2982315, overlap 2982315 TTTTACACAGAAACA AAAAAGCCATC TTCAC GATGGCTTTTG TTTAATACAGAATGA TERM 3342 2982315 - 2982331 + T 86 -8 -4.93877 | opp_overlap 2982315, overlap 2982310 CACAGAAACAAAAAA GCCATC TTCAC GATGGC TTTTGTTTAATACAG TERM 3343 2982331 - 2982315 - T 100 -8 -5.76237 | opp_overlap 2982310 2982315 CACAGAAACAAAAAA GCCATC TTCAC GATGGC TTTTGTTTAATACAG Spea_2438 2983128 - 2982409 - | fatty acid metabolism regulator Spea_2439 2983416 - 2985002 + | sodium/proton antiporter TERM 3344 2985047 - 2985065 + F 100 -13.2 -6.23545 | opp_overlap 2985047 GTTAGTCATATAAAA CGCCCTAT TCA ATAGGGCG TTTTTTTTATTTGCA TERM 3345 2985065 - 2985047 - f 100 -13.2 -4.55287 | opp_overlap 2985047 GTTAGTCATATAAAA CGCCCTAT TCA ATAGGGCG TTTTTTTTATTTGCA Spea_2440 2985081 - 2985599 + | disulphide bond formation protein DsbB TERM 3346 2985654 - 2985609 - T 100 -13 -4.72127 | gap 2, opp_overlap 2985618 2985624, overlap 2985616 2985624 AGATAATACATAAAA CGACAGATAAAAAAACGCCCTA TTTC TAGGGCGTTTTTCTA-CT-TCG ACTCTTGGCTATTCA TERM 3347 2985649 - 2985616 - T 100 -16.3 -3.13323 | opp_overlap 2985618 2985624, overlap 2985609 2985624 ACATAAAACGACAGA TAAAAAAACGCCCTA TTTC TAGGGCGTTTTTCTA CTTCGACTCTTGGCT TERM 3348 2985618 - 2985647 + T 83 -12.3 -2.75535 | opp_overlap 2985616 2985609 2985624, overlap 2985624 ATAAAACGACAGATA AAAAAACGCCCTA TTTC TAGGGCGTTTTTC TACTTCGACTCTTGG TERM 3349 2985641 - 2985624 - T 100 -11.3 -5.76633 | opp_overlap 2985618 2985624, overlap 2985616 2985609 CGACAGATAAAAAAA CGCCCTA TTTC TAGGGCG TTTTTCTACTTCGAC TERM 3350 2985624 - 2985641 + T 95 -11.3 -4.98255 | opp_overlap 2985624 2985616 2985609, overlap 2985618 CGACAGATAAAAAAA CGCCCTA TTTC TAGGGCG TTTTTCTACTTCGAC Spea_2441 2986103 - 2985663 - | hypothetical protein TERM 3351 2986278 - 2986260 - R 89 -6.7 -5.30616 | opp_overlap 2986260 TTATTTAAACAAAAA TAGCGAC TCTAG GCCGCTA TTCATTAAACTGACT Spea_2442 2987302 - 2986307 - | lytic murein transglycosylase Spea_2443 2987625 - 2987344 - | hypothetical protein Spea_2444 2987700 - 2988410 + | septum site-determining protein MinC TERM 3352 2988821 - 2988835 + G 84 -7.8 -4.73614 | CGGGTATCGAAACCG GCGCTA TGA TGGCGC TTTATTTTGCTGATA Spea_2445 2988442 - 2989251 + | septum site-determining protein MinD Spea_2446 2989255 - 2989515 + | cell division topological specificity factor MinE TERM 3353 2989552 - 2989537 - T 100 -11.8 -5.06816 | opp_overlap 2989537 AGCCCCCAATAAAAA GCCCGC TTAC GCGGGC TTTTTTGTTTTACGA TERM 3354 2989537 - 2989552 + T 100 -11.8 -5.79595 | opp_overlap 2989537 AGCCCCCAATAAAAA GCCCGC TTAC GCGGGC TTTTTTGTTTTACGA Spea_2447 2990684 - 2989575 - | ribonuclease D TERM 3355 2990707 - 2990732 + r 90 -13.3 -2.87931 | opp_overlap 2990712, overlap 2990712 TACTCCATAAATATG CAAAAGCCGGC TATT GCCGGCTTTAG TGTATCAAAAGTGGC TERM 3356 2990712 - 2990727 + r 91 -11.8 -3.88498 | opp_overlap 2990712, overlap 2990707 CATAAATATGCAAAA GCCGGC TATT GCCGGC TTTAGTGTATCAAAA TERM 3357 2990727 - 2990712 - R 95 -11.8 -4.33907 | opp_overlap 2990712 2990707 CATAAATATGCAAAA GCCGGC TATT GCCGGC TTTAGTGTATCAAAA TERM 3358 2990803 - 2990828 + r 83 -9 -4.11751 | CTCATCTCTCAATTC CCTACGTAGG ATCTTA CCTACGTTGG TTTTAGGCAGTTCAT Spea_2448 2992446 - 2990779 - | long-chain-fatty-acid--CoA ligase Spea_2449 2993508 - 2992633 - | alpha/beta hydrolase fold Spea_2450 2994347 - 2993517 - | hypothetical protein Spea_2451 2995136 - 2994423 - | hypothetical protein TERM 3359 2995087 - 2995075 - G 72 -6.2 -4.32951 | overlap 2995071 AGTTCAAGCAAGAAA CGGG TTCGT CCCG GTGCACCGGAGGAGT Spea_2452 2995437 - 2995129 - | hypothetical protein Spea_2453 2996202 - 2995486 - | peptidase M22 glycoprotease Spea_2454 2996567 - 2996992 + | hypothetical protein Spea_2455 2998910 - 2996985 - | helicase c2 TERM 3360 2997078 - 2997064 - G 75 -2.8 -5.10077 | opp_overlap 2997064 AAAGAGTTTAAAAAA GCCT GTCCGTA AGGC TTATTAACGATTCTG TERM 3361 2999317 - 2999347 + H 79 -9.1 -3.90291 | gap 1, overlap 2999331 2999334 CATCACCATATGCGG TAG-CCTTCGGAAG CTCA CTGCCGAAGGACTA TTTCCTTCCGGCGGT TERM 3362 2999334 - 2999361 + H 72 -8.5 -3.52472 | gap 1, overlap 2999317 2999331 GCCTTCGGAAGCTCA CTGCC-GAAGGA CTATT TCCTTCCGGCGG TTGATTTAAAAATAT TERM 3363 2999383 - 2999404 + H 100 -13.1 -5.50313 | opp_overlap 2999383 TAAAAATATCAAAAA CCCTTGGAA GGAA TTCCAAGGG TTTTTTGGTTTTATC TERM 3364 2999404 - 2999383 - H 100 -13.1 -5.02231 | opp_overlap 2999383 TAAAAATATCAAAAA CCCTTGGAA GGAA TTCCAAGGG TTTTTTGGTTTTATC Spea_2456 2999471 - 3000370 + | ATP phosphoribosyltransferase Spea_2457 3000375 - 3001703 + | histidinol dehydrogenase TERM 3365 3002360 - 3002370 + G 73 -2.4 -5.1675 | TTTGCATTGGCGGGA GCGC GGT GCGG TTTTTTACTGGCTAA Spea_2458 3001700 - 3002755 + | histidinol-phosphate aminotransferase TERM 3366 3002771 - 3002758 - f 87 -5.3 -5.42605 | TCAACAAAAATAAAA TAGCT AGAA AGCTA ATAATTAAAAAATAA Spea_2459 3002843 - 3003937 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase Spea_2460 3003934 - 3004677 + | imidazole glycerol phosphate synthase subunit HisH Spea_2461 3004674 - 3005411 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Spea_2462 3005393 - 3006166 + | imidazole glycerol phosphate synthase subunit HisF Spea_2463 3006202 - 3006840 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 3367 3006874 - 3006852 - f 72 -9.2 -3.36327 | opp_overlap 3006852 GTAGCCGAGTGATAA GGGCGTAA GCTAAAT TTACGCCC TTTATTTTTGGGGAT TERM 3368 3006852 - 3006874 + F 93 -9.9 -4.86385 | opp_overlap 3006852 GTAGCCGAGTGATAA GGGCGTAAG CTAAA TTTACGCCC TTTATTTTTGGGGAT Spea_2464 3007082 - 3008185 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3369 3008196 - 3008251 + F 95 -13.6 -3.42078 | opp_overlap 3008196 3008201 3008202 3008214, overlap 3008203 3008214 TTTAATCGATGAGAA GACAATTGTAATAAAAAAGCCGCAAT ATCA ATTGCGGCTTTTTTATTAATCATGTC TTGTCCTGAAATGTG TERM 3370 3008251 - 3008196 - f 95 -13.6 -3.44319 | opp_overlap 3008196 3008203 3008214, overlap 3008201 3008202 3008214 TTTAATCGATGAGAA GACAATTGTAATAAAAAAGCCGCAAT ATCA ATTGCGGCTTTTTTATTAATCATGTC TTGTCCTGAAATGTG TERM 3371 3008245 - 3008201 - f 90 -12.6 -3.77808 | gap 1, opp_overlap 3008196 3008203 3008214, overlap 3008196 3008202 3008214 TCGATGAGAAGACAA TTGTAATAAAAAAGCCGCAAT ATCA ATTGCGGCTTTTTTATTA-AT CATGTCTTGTCCTGA TERM 3372 3008244 - 3008202 - f 100 -16.1 -2.86203 | gap 1, opp_overlap 3008196 3008203 3008214, overlap 3008201 3008196 3008214 CGATGAGAAGACAAT TGTAATAAAAAAGCCGCAAT ATCA ATTGCGGCTTTTTTATTA-A TCATGTCTTGTCCTG TERM 3373 3008203 - 3008244 + F 100 -17.7 -2.7924 | opp_overlap 3008202 3008201 3008196 3008214, overlap 3008196 3008214 GATGAGAAGACAATT GTAATAAAAAAGCCGCAAT ATCA ATTGCGGCTTTTTTATTAA TCATGTCTTGTCCTG TERM 3374 3008214 - 3008233 + F 100 -12.2 -5.52023 | opp_overlap 3008214 3008202 3008201 3008196, overlap 3008203 3008196 AATTGTAATAAAAAA GCCGCAAT ATCA ATTGCGGC TTTTTTATTAATCAT TERM 3375 3008233 - 3008214 - f 100 -12.2 -5.4756 | opp_overlap 3008203 3008196 3008214, overlap 3008202 3008201 3008196 AATTGTAATAAAAAA GCCGCAAT ATCA ATTGCGGC TTTTTTATTAATCAT TERM 3376 3008254 - 3008282 + F 86 -9.8 -3.97947 | gap 1, opp_overlap 3008263 TATTAATCATGTCTT GTCCTGAAATGTG TTTA CACATTT-AGGAC TTTATAATGACTACA Spea_2465 3008289 - 3008687 + | transposase TERM 3377 3009027 - 3009040 + G 72 -6.7 -4.28111 | opp_overlap 3009026 AGTTAGTGCCAACAG CACCT GAAG AGGTG TTTGTTAGTGATATA TERM 3378 3009414 - 3009425 + G 72 -3 -4.9792 | AGTTAAAGCAACTCG TTGA GGAG TCAA TTTTTATATACAATG TERM 3379 3009520 - 3009497 - g 100 -13.2 -5.27923 | opp_overlap 3009499 CAAGTGCATAAAAAA GACCAGCAGC AGAA GCTACTGGTC TAGTAAAAACCGTCA Spea_2466 3008771 - 3009523 + | integrase catalytic region Spea_2467 3010560 - 3009622 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 3380 3010619 - 3010590 - R 95 -13.7 -3.51904 | opp_overlap 3010593 3010595 3010596, overlap 3010596 CAGCAAATGGAAACA GAAAAAGCCACTC AATT GAGTGGCCTCTTC ATTACAGTGCTAAAG TERM 3381 3010613 - 3010596 - R 100 -11.3 -5.20783 | opp_overlap 3010595 3010593 3010596, overlap 3010590 ATGGAAACAGAAAAA GCCACTC AATT GAGTGGC CTCTTCATTACAGTG TERM 3382 3010596 - 3010613 + r 79 -11.3 -2.54574 | opp_overlap 3010596 3010590, overlap 3010595 3010593 ATGGAAACAGAAAAA GCCACTC AATT GAGTGGC CTCTTCATTACAGTG Spea_2468 3010934 - 3010638 - | integration host factor, alpha subunit Spea_2469 3013326 - 3010939 - | phenylalanyl-tRNA synthetase subunit beta Spea_2470 3014329 - 3013343 - | phenylalanyl-tRNA synthetase subunit alpha Spea_2471 3014768 - 3016267 + | methyl-accepting chemotaxis sensory transducer TERM 3383 3016306 - 3016281 - f 72 -10.5 -2.5499 | opp_overlap 3016286, overlap 3016286 AGTTAATAGCAATAT TAAAAGCAGCC ACTT GGCTGCTTTTT TGATTCTAAATAAAT TERM 3384 3016286 - 3016301 + F 100 -10.4 -5.32944 | opp_overlap 3016286 3016281 ATAGCAATATTAAAA GCAGCC ACTT GGCTGC TTTTTTGATTCTAAA TERM 3385 3016301 - 3016286 - f 90 -10.4 -4.45399 | opp_overlap 3016286, overlap 3016281 ATAGCAATATTAAAA GCAGCC ACTT GGCTGC TTTTTTGATTCTAAA TERM 3386 3016683 - 3016671 - g 75 -2.7 -5.16237 | overlap 3016672 AACTGCAGCAAAAAA CCAAT AAA ATTGA AAACCTAGCCGTATC TERM 3387 3016811 - 3016822 + G 81 -3.6 -5.34309 | opp_overlap 3016790 CTCGGCGGTGGAGTA TGGC CCGA GCCG TTTTTATTTGCTCCT TERM 3388 3018761 - 3018786 + G 73 -4.1 -4.82901 | gap 1, overlap 3018763 3018765 CTCATTTTCTATCGA GCTATCAGTAAT ACC ATTACCGAT-GC TTTTTATCAGCAAGG Spea_2472 3016457 - 3019057 + | putative PAS/PAC sensor protein Spea_2473 3020018 - 3019143 - | hypothetical protein TERM 3389 3019471 - 3019486 + g 79 -9 -4.14392 | GAGTTCTCTACCGCC CCCGTA TCAA TACGGG TTTTAAAGATTAACC TERM 3390 3019702 - 3019726 + g 77 -11.5 -3.15583 | overlap 3019700 TAGCGGGTCTCTGTA CCTTGAGAGTT ACT GACTCTCGAGG TCTTAACTATCTTGG Spea_2474 3020489 - 3020193 - | hypothetical protein Spea_2475 3020942 - 3020589 - | hypothetical protein TERM 3391 3020674 - 3020661 - G 84 -8.1 -4.59089 | GAACTCACAAATAAA CCGAG TTTG CTCGG CGGTAGCCTTATGAC Spea_2476 3021885 - 3021310 - | YceI family protein TERM 3392 3022076 - 3022050 - R 83 -9.5 -3.91506 | opp_overlap 3022055, overlap 3022055 GGATCGCCAAAAACA CAAAAGCCGCA AACAA TGCGGCTTTTT AAATAACGGTAGTTA TERM 3393 3022055 - 3022071 + r 93 -9.4 -4.66163 | opp_overlap 3022055 3022050 GCCAAAAACACAAAA GCCGCA AACAA TGCGGC TTTTTAAATAACGGT TERM 3394 3022071 - 3022055 - R 93 -9.4 -4.98672 | opp_overlap 3022055, overlap 3022050 GCCAAAAACACAAAA GCCGCA AACAA TGCGGC TTTTTAAATAACGGT Spea_2477 3022727 - 3022089 - | pyridoxamine 5'-phosphate oxidase TERM 3395 3022758 - 3022778 + r 100 -15.5 -3.78953 | opp_overlap 3022758, overlap 3022761 AAGCACATAAAAAAA GAAGCGCTC ATT GAGCGCTTC TTTAATCATAACAAT TERM 3396 3022778 - 3022758 - R 100 -15.5 -5.75478 | opp_overlap 3022758 3022761 AAGCACATAAAAAAA GAAGCGCTC ATT GAGCGCTTC TTTAATCATAACAAT TERM 3397 3022761 - 3022775 + r 90 -11.4 -4.0274 | opp_overlap 3022758, overlap 3022758 CACATAAAAAAAGAA GCGCTC ATT GAGCGC TTCTTTAATCATAAC Spea_2478 3023798 - 3022869 - | agmatinase Spea_2479 3024743 - 3023823 - | adenosylmethionine decarboxylase TERM 3398 3024287 - 3024338 + g 71 -10.5 -2.7094 | gap 2, opp_overlap 3024285, overlap 3024286 3024289 ACATCAACAAACTCG CACCACTATT-CCTATCTTG-GGTC GGTT GACTACAAAATAGGTAATGGTGGTG GTTATCTAAATGCCC TERM 3399 3024939 - 3024904 - R 100 -14.2 -4.59773 | opp_overlap 3024909, overlap 3024909 TGTCAGGCTTAAAAA CAAAACCAGCTTCAAG CGAG CTTAAAGCTGGTTATG TAGCTCGAGAGCAGT TERM 3400 3024909 - 3024934 + r 79 -10.5 -3.51924 | opp_overlap 3024909 3024904 GGCTTAAAAACAAAA CCAGCTTCAAG CGAG CTTAAAGCTGG TTATGTAGCTCGAGA TERM 3401 3024934 - 3024909 - R 100 -12.7 -5.26119 | opp_overlap 3024909, overlap 3024904 GGCTTAAAAACAAAA CCAGCTTCAAG CGAG CTTAAAGCTGG TTATGTAGCTCGAGA Spea_2480 3026923 - 3025010 - | arginine decarboxylase TERM 3402 3026350 - 3026334 - G 70 -9.3 -3.35011 | opp_overlap 3026334 3026332, overlap 3026332 3026328 ACACGTAAACCAAGA CGCGGCG TAA CGCCGAG CTCTTTAGCTTGCTC TERM 3403 3027217 - 3027236 + H 87 -5 -5.4505 | opp_overlap 3027219 TGTGACTTTCAATAT TACCTAAC CGCG GTTCGGTA TTTTTTATTCAAAAA TERM 3404 3027789 - 3027803 + G 71 -3.5 -4.74103 | gap 1, opp_overlap 3027789 GAAGCAAAAGAAAAT GGC-CC ATAT GGCGCC TTTTTGGATTGGGGC Spea_2481 3027546 - 3028379 + | hypothetical protein TERM 3405 3028487 - 3028460 - f 100 -15 -3.72893 | opp_overlap 3028460 3028466, overlap 3028444 CACCTTTGCATTAAA GCATGGCTCTGT TATA ACAAAGCCATGC TTTTTTATTAAGAGG TERM 3406 3028460 - 3028487 + F 100 -12.8 -5.4505 | opp_overlap 3028460 3028444, overlap 3028466 CACCTTTGCATTAAA GCATGGCTCTGT TATA ACAAAGCCATGC TTTTTTATTAAGAGG Spea_2482 3028508 - 3029158 + | hypothetical protein TERM 3407 3029630 - 3029646 + G 73 -2.1 -5.2189 | opp_overlap 3029630 TCTACACTCTGAGAA CAGGGCG AGA CAGCCTG TTTTTTGGTCGTTAC Spea_2483 3029284 - 3030093 + | hypothetical protein TERM 3408 3030310 - 3030288 - g 76 -4 -4.93296 | TTACTAGGAGAAAAA CCTGGCAGCG CTG CATTGCTAGG TAGAGTCGCCTCTCT Spea_2484 3030090 - 3030995 + | ABC transporter related TERM 3409 3031035 - 3031018 - T 79 -8.3 -4.00868 | opp_overlap 3031019, overlap 3031019 GCATGTAGAATGAAA TGGCGCC GCTC GGCGCCT TTTTTATTTTCCCAA TERM 3410 3031019 - 3031034 + T 100 -11.8 -5.79595 | opp_overlap 3031018 3031019 CATGTAGAATGAAAT GGCGCC GCTC GGCGCC TTTTTTATTTTCCCA TERM 3411 3031034 - 3031019 - T 82 -11.8 -3.00039 | opp_overlap 3031019, overlap 3031018 CATGTAGAATGAAAT GGCGCC GCTC GGCGCC TTTTTTATTTTCCCA TERM 3412 3031352 - 3031331 - T 100 -15.9 -5.37593 | opp_overlap 3031325 3031333 CTTGAAACGAAAAAA GAGCCGTGG TAAA CCACGGCTC TTCAAAATTCTTTGT TERM 3413 3031333 - 3031350 + T 84 -12.7 -3.08349 | opp_overlap 3031331, overlap 3031325 TGAAACGAAAAAAGA GCCGTGG TAAA CCACGGC TCTTCAAAATTCTTT Spea_2485 3031603 - 3031397 - | cold-shock DNA-binding domain-containing protein Spea_2486 3032712 - 3031906 - | 23S rRNA methyltransferase A TERM 3414 3031961 - 3031974 + g 84 -5.3 -5.35721 | opp_overlap 3031954 3031961, overlap 3031955 CAACTCAAGCCAGAA TTAGC CAAT GCTAA TTTTTGTTCTTCTGT TERM 3415 3033598 - 3033587 - g 71 -7.2 -4.11216 | CCGTGAGTGGCAAAA CGGC AACA GCCG CTGGGATATTATCGA Spea_2487 3033204 - 3034616 + | exonuclease I TERM 3416 3034626 - 3034610 - f 73 -8.1 -3.90318 | TCATTATCTTAGAAA CCTATAA GCT TTATAGG TGGCAACTGAGATCT Spea_2488 3034712 - 3035602 + | cytidine deaminase TERM 3417 3035633 - 3035662 + T 85 -12.3 -3.18274 | opp_overlap 3035639, overlap 3035639 AGAAATAGTCTAGAC GAAAAAGGACCAC TAAT GTGGTCCTTTTTG TTGGGTTAAACTAAA TERM 3418 3035639 - 3035656 + T 95 -11.3 -5.13741 | opp_overlap 3035639, overlap 3035633 AGTCTAGACGAAAAA GGACCAC TAAT GTGGTCC TTTTTGTTGGGTTAA TERM 3419 3035656 - 3035639 - T 95 -11.3 -4.80882 | opp_overlap 3035639 3035633 AGTCTAGACGAAAAA GGACCAC TAAT GTGGTCC TTTTTGTTGGGTTAA Spea_2489 3036556 - 3035681 - | 6-phosphogluconate dehydrogenase NAD-binding TERM 3420 3036667 - 3036650 - R 95 -9.1 -5.49234 | opp_overlap 3036650 ACAGGCAATAAAAAA GCCAGCC CAAA GGCTAGC TTTCATTAATGATTT TERM 3421 3036650 - 3036667 + r 71 -6.9 -3.98716 | opp_overlap 3036650 ACAGGCAATAAAAAA GCCAGCC CAAA GGCTAGC TTTCATTAATGATTT Spea_2490 3037194 - 3036694 - | thioesterase superfamily protein TERM 3422 3037105 - 3037119 + g 74 -11.4 -2.90496 | overlap 3037103 3037107 GTCAATCCATTTCAT CACGGC GCC GCCGTG TACTTTACCGCCAAA Spea_2491 3037628 - 3037260 - | hypothetical protein TERM 3423 3037838 - 3037825 - R 100 -9.5 -5.60993 | opp_overlap 3037825 GCTGCCACAAAAAAA GCGCC CTTA GGCGC TTTTAAATTAACTCG TERM 3424 3037825 - 3037838 + r 89 -9.5 -4.28774 | opp_overlap 3037825 GCTGCCACAAAAAAA GCGCC CTTA GGCGC TTTTAAATTAACTCG Spea_2492 3039105 - 3037867 - | Beta-ketoacyl synthase TERM 3425 3039348 - 3039315 - R 100 -16.9 -3.92075 | opp_overlap 3039321, overlap 3039321 AGCGGCAGCTAGAAA CAAAAACAGGCGGCA AAAA TGCCGCCTGTTTTCA AGAATTCTAGATTAC TERM 3426 3039321 - 3039342 + r 100 -15.9 -4.12198 | opp_overlap 3039315 3039321 AGCTAGAAACAAAAA CAGGCGGCA AAAA TGCCGCCTG TTTTCAAGAATTCTA TERM 3427 3039342 - 3039321 - R 100 -15.9 -5.38958 | opp_overlap 3039321, overlap 3039315 AGCTAGAAACAAAAA CAGGCGGCA AAAA TGCCGCCTG TTTTCAAGAATTCTA Spea_2493 3039593 - 3039360 - | acyl carrier protein Spea_2494 3040496 - 3039750 - | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 3428 3039982 - 3039995 + g 70 -5.3 -4.42653 | opp_overlap 3039975 3039994 TGACGAGATGCAACC TCTCT TGCA AGAGA TTTTGTAAATCCAAT TERM 3429 3040089 - 3040101 + g 71 -3.3 -4.81685 | opp_overlap 3040071 3040070 3040090, overlap 3040090 GCCAATATTGATAAT ACGTC CAT GACGC TTTTTCATCATTGGT Spea_2495 3041432 - 3040506 - | malonyl CoA-acyl carrier protein transacylase Spea_2496 3042469 - 3041510 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3430 3042385 - 3042396 + g 83 -4.4 -5.28176 | overlap 3042367 CAATCCATTGATCTG TGGT TTCG ACCA TTTTTTCTAGATCGA Spea_2497 3043508 - 3042480 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 3431 3042596 - 3042583 - G 74 -3.8 -5.00884 | opp_overlap 3042569, overlap 3042570 ATTGCTTGTAAAAAA GCAG CTTCAT CTGC GCACCCATGACTTTT TERM 3432 3043448 - 3043427 - G 90 -14.5 -3.17075 | opp_overlap 3043427 GGGGGTTTAAGCGAA GTGCCTGCA AAGA TGCAGGCAC TGTGATGCGGGGACC TERM 3433 3043427 - 3043448 + g 87 -14.5 -2.78384 | opp_overlap 3043427 GGGGGTTTAAGCGAA GTGCCTGCA AAGA TGCAGGCAC TGTGATGCGGGGACC Spea_2498 3043694 - 3043524 - | 50S ribosomal protein L32 Spea_2499 3044236 - 3043712 - | hypothetical protein Spea_2500 3045122 - 3045703 + | maf protein TERM 3434 3045801 - 3045776 - f 70 -7.7 -3.73953 | opp_overlap 3045776 3045780 ATTAGTGCTAGTAAA TTAATCTTGCT CGTT AGCAAGCTTAA TTAAGTGAATAATAA Spea_2501 3045885 - 3047243 + | diguanylate cyclase with PAS/PAC sensor Spea_2502 3048047 - 3047445 - | HAD family hydrolase Spea_2503 3049048 - 3048089 - | RluA family pseudouridine synthase TERM 3435 3051738 - 3051728 - g 79 -8.2 -4.21744 | overlap 3051723 ACTGAAGAAACCAAA GCGG TAG CCGC TAAAGTTGATACTCC Spea_2504 3049646 - 3052900 + | ribonuclease TERM 3436 3052926 - 3052945 + F 100 -12.2 -5.47159 | opp_overlap 3052926, overlap 3052940 CTGTTTTGTCTAAAA GCCATGCA TTTA TGCATGGC TTTTTTATGTTCAAA TERM 3437 3052945 - 3052926 - f 91 -12.2 -4.07568 | opp_overlap 3052926 3052940 CTGTTTTGTCTAAAA GCCATGCA TTTA TGCATGGC TTTTTTATGTTCAAA TERM 3438 3054320 - 3054332 + G 78 -6.3 -4.62904 | TCCACTCTTCTTTGG TTCAG TTG CTGAA TTTTTAGAGCTATTT Spea_2505 3053031 - 3054590 + | sulphate transporter TERM 3439 3054607 - 3054643 + T 100 -16.9 -2.89683 | opp_overlap 3054617, overlap 3054617 TAGCATTAAGCTTAA CAATAAAAAAGACAGGC TAT GCCTGTCTTTTTTATTA TGTGTAAACTCGAGT TERM 3440 3054617 - 3054633 + T 100 -12.3 -5.62045 | opp_overlap 3054617, overlap 3054607 CTTAACAATAAAAAA GACAGGC TAT GCCTGTC TTTTTTATTATGTGT TERM 3441 3054633 - 3054617 - T 100 -12.3 -5.64873 | opp_overlap 3054617 3054607 CTTAACAATAAAAAA GACAGGC TAT GCCTGTC TTTTTTATTATGTGT Spea_2506 3055568 - 3054666 - | bifunctional methionine sulfoxide reductase B/A protein Spea_2507 3056014 - 3056853 + | 2OG-Fe(II) oxygenase TERM 3442 3056878 - 3056903 + F 95 -11.9 -4.20918 | opp_overlap 3056875 3056884, overlap 3056884 CACTCAATAAGAGCT CAATAAGCGCC TTAG GGCGCTTTTTG TTTGTTAAACTTAAG TERM 3443 3056884 - 3056897 + F 100 -9.5 -5.47159 | opp_overlap 3056875 3056884, overlap 3056878 ATAAGAGCTCAATAA GCGCC TTAG GGCGC TTTTTGTTTGTTAAA TERM 3444 3056897 - 3056884 - f 79 -9.5 -3.68704 | opp_overlap 3056878 3056884, overlap 3056875 ATAAGAGCTCAATAA GCGCC TTAG GGCGC TTTTTGTTTGTTAAA TERM 3445 3057647 - 3057632 - g 72 -5.4 -4.38712 | overlap 3057641 CTGAGCGTTACAAAA TCAAGC AGAT GCCTGA CACAGACATTGAGCT Spea_2508 3056971 - 3057909 + | ribosomal biogenesis GTPase TERM 3446 3057931 - 3057947 + T 85 -7.2 -4.85129 | opp_overlap 3057931 3057926 TTTCAATAACTAAAA GGCGCT ATAAC GGCGCC TTTTTAATATCTAAT TERM 3447 3057947 - 3057931 - T 77 -6.5 -4.56133 | opp_overlap 3057931, overlap 3057926 TTTCAATAACTAAAA GGCGC TATAACG GCGCC TTTTTAATATCTAAT Spea_2509 3058532 - 3058044 - | protein tyrosine phosphatase Spea_2510 3058779 - 3059435 + | nitroreductase TERM 3448 3059517 - 3059540 + T 83 -12.5 -2.64805 | opp_overlap 3059517, overlap 3059514 3059513 AGCTTAGCAGATAAA GGTTCGAGG CTTTTT CCTCGAACC TGACTTCTCATTTCA TERM 3449 3059540 - 3059517 - T 93 -12.5 -4.08974 | opp_overlap 3059514 3059513 3059517 AGCTTAGCAGATAAA GGTTCGAGG CTTTTT CCTCGAACC TGACTTCTCATTTCA Spea_2511 3060438 - 3059563 - | DNA ligase Spea_2512 3060701 - 3061072 + | diacylglycerol kinase TERM 3450 3061121 - 3061101 - f 81 -6.9 -4.78029 | CTAATAAAACCAAAA GCGCTAA TCTATTT TTAGCGC TTAGCCGTTCATTTA Spea_2513 3061478 - 3062350 + | hypothetical protein TERM 3451 3062468 - 3062487 + F 70 -9.4 -2.54896 | opp_overlap 3062472, overlap 3062465 ACAACATCACTTGGA GAGAGAAT ATCG ATTCTCTC TGCCTTACCTACAGA Spea_2514 3063013 - 3064038 + | diguanylate cyclase TERM 3452 3064164 - 3064130 - T 93 -11.6 -4.37092 | opp_overlap 3064128 3064133 ACTGTTTTCACAAAA GTACCGAGCTGTTTTA TAT CAAAATAACTCGGTAC TCTAAATTGGCTCAG Spea_2515 3064855 - 3064166 - | sortase family protein Spea_2516 3067224 - 3064855 - | cell wall anchor domain-containing protein TERM 3453 3067184 - 3067169 - G 93 -11.8 -3.73224 | opp_overlap 3067168 TTAGCTGCCATTAAA GCCCCC AAAC GGGGGC CTCCTTGGCGATGAC Spea_2517 3068055 - 3067306 - | OmpA/MotB domain-containing protein TERM 3454 3068885 - 3068862 - g 79 -8.2 -4.36127 | opp_overlap 3068865, overlap 3068865 TGCAAGAAGCTAAAA TATTCGTCGA TGAT TCGACGATTA CTTCCCATGTAAAAC TERM 3455 3068865 - 3068882 + G 73 -9.9 -3.36785 | opp_overlap 3068862 3068865 AAGAAGCTAAAATAT TCGTCGA TGAT TCGACGA TTACTTCCCATGTAA Spea_2518 3068300 - 3068992 + | two component transcriptional regulator TERM 3456 3069776 - 3069751 - g 70 -9 -3.34029 | overlap 3069742 TAAACAGGGCTACAA TGTCGAGCTG CGGATC CCGCTCGACA TGGTGGGCAGTAAAC Spea_2519 3069089 - 3071275 + | histidine kinase TERM 3457 3071918 - 3071933 + G 78 -6.2 -4.64766 | GGCGTTAATCCAACC TAACAC TAAG GTGTTA TTTTTGGAGTCTCCA TERM 3458 3072079 - 3072054 - g 73 -11.3 -2.50816 | gap 1, opp_overlap 3072054, overlap 3072053 GCGTCACCGATTAAC TCT-CGCCCATT TGA AATGGGCGTAGA TATCTCTATCCAAGC TERM 3459 3072054 - 3072079 + G 75 -11.3 -3.05022 | gap 1, opp_overlap 3072053 3072054 GCGTCACCGATTAAC TCT-CGCCCATT TGA AATGGGCGTAGA TATCTCTATCCAAGC TERM 3460 3072305 - 3072292 - g 72 -6.7 -4.21676 | AGAACGCACTTAAAA TAGCC AATT GGCTA AATAGCCGCCCAGAA Spea_2520 3071448 - 3072668 + | cystathionine beta-lyase TERM 3461 3072724 - 3072747 + F 72 -4.5 -4.71426 | opp_overlap 3072727, overlap 3072727 AGCATGTTAATCCCA AAAGCCGGC TTCGTT GTCGGCTTG TTTTATTGATGCCGA TERM 3462 3072727 - 3072744 + F 74 -6.2 -4.46587 | opp_overlap 3072727, overlap 3072724 ATGTTAATCCCAAAA GCCGGC TTCGTT GTCGGC TTGTTTTATTGATGC Spea_2521 3072832 - 3073413 + | hypothetical protein TERM 3463 3073442 - 3073470 + T 91 -10.3 -4.60487 | opp_overlap 3073447, overlap 3073447 3073464 AGAAAAACACACAGC AAAAAGGGCGGAT ATA ATCCGCCCTTTGG TTTTTAAACGTGCTG TERM 3464 3073447 - 3073465 + T 100 -14.6 -4.32046 | opp_overlap 3073447, overlap 3073442 3073464 AACACACAGCAAAAA GGGCGGAT ATA ATCCGCCC TTTGGTTTTTAAACG TERM 3465 3073465 - 3073447 - T 100 -14.6 -4.87037 | opp_overlap 3073447 3073442 3073464 AACACACAGCAAAAA GGGCGGAT ATA ATCCGCCC TTTGGTTTTTAAACG Spea_2522 3074017 - 3073523 - | CreA family protein TERM 3466 3073716 - 3073696 - G 71 -7.7 -3.85256 | overlap 3073685 GAGACTTAAACAGAA TACTTAAGG ACT CCTTAAATA CCACTTCACCATTTT Spea_2523 3075473 - 3074106 - | putative chaperone TERM 3467 3075572 - 3075558 - R 100 -11.4 -6.02919 | opp_overlap 3075558 TTACAAATAAAAAAA GCAGCC TTA GGCTGC TTTTAATGATGTTAA TERM 3468 3075558 - 3075572 + r 93 -11.4 -4.35461 | opp_overlap 3075558 TTACAAATAAAAAAA GCAGCC TTA GGCTGC TTTTAATGATGTTAA Spea_2524 3076616 - 3075633 - | rhodanese domain-containing protein TERM 3469 3077414 - 3077430 + G 75 -10.9 -3.03124 | opp_overlap 3077412 3077411 AAGTCCCCACAACTG CTTGGCT TTG AGCCAAG TATTGCCGACTACGC Spea_2525 3076901 - 3077626 + | glutathione S-transferase domain-containing protein Spea_2526 3078288 - 3077683 - | lysine exporter protein LysE/YggA TERM 3470 3078572 - 3078542 - g 75 -2.7 -5.26918 | overlap 3078530 3078543 3078544 AGATGGCATAAAAAA CGGTGAGCTTA-TGC CAA ACAGTAAGCTC-CCA CCTCAAAGGTTGCTT Spea_2527 3078453 - 3079820 + | transcriptional regulator TERM 3471 3079879 - 3079895 + T 90 -12.3 -3.56643 | opp_overlap 3079879 3079881 CCAAGACACAAAAAA GCCGCTA TTT TAGCGGC TTTAAGCAGTCTAAA TERM 3472 3079895 - 3079879 - T 100 -12.3 -5.47431 | opp_overlap 3079879, overlap 3079881 CCAAGACACAAAAAA GCCGCTA TTT TAGCGGC TTTAAGCAGTCTAAA Spea_2528 3080396 - 3079920 - | 17 kDa surface antigen Spea_2529 3080451 - 3081161 + | leucyl/phenylalanyl-tRNA--protein transferase TERM 3473 3081509 - 3081495 - g 75 -10 -3.65046 | GCGTTACGTCAACAA CCGTCA TCA TGACGG TCCCATGTACCCTGC Spea_2530 3081151 - 3081876 + | arginyl-tRNA-protein transferase Spea_2531 3081991 - 3082209 + | translation initiation factor IF-1 TERM 3474 3082234 - 3082260 + T 95 -13.8 -3.65671 | opp_overlap 3082240, overlap 3082240 CCATATAACGTATAT AAAAAAGCCGGC TAT GCCGGCTTTTTG TTGTCTGTAATTCTA TERM 3475 3082254 - 3082240 - T 100 -12.8 -5.38951 | opp_overlap 3082240 3082234 AACGTATATAAAAAA GCCGGC TAT GCCGGC TTTTTGTTGTCTGTA TERM 3476 3082240 - 3082254 + T 100 -12.8 -5.27206 | opp_overlap 3082240, overlap 3082234 AACGTATATAAAAAA GCCGGC TAT GCCGGC TTTTTGTTGTCTGTA Spea_2532 3084600 - 3082342 - | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 3477 3082407 - 3082420 + g 75 -9.5 -3.51924 | CTTTAGCGTCGACTC GGGCG ATAC CGCCC TTCTCTAACTCGCCG TERM 3478 3084547 - 3084568 + g 72 -8.8 -3.6215 | CTCATGACGGGCATC TCTGGCTT GTTGAA AAGCCAGA TTTAAGGTGACTTCA Spea_2533 3084947 - 3084639 - | ATP-dependent Clp protease adaptor protein ClpS Spea_2534 3085187 - 3085393 + | cold-shock DNA-binding domain-containing protein TERM 3479 3085478 - 3085500 + T 100 -12.1 -5.4756 | opp_overlap 3085478 TAAAAGATAAAAAAA GCAGAGTAG TTAAT CTACTCTGC TTTTTTATTGCAGTT TERM 3480 3085500 - 3085478 - T 100 -12.1 -5.9362 | opp_overlap 3085478 TAAAAGATAAAAAAA GCAGAGTAG TTAAT CTACTCTGC TTTTTTATTGCAGTT TERM 3481 3085525 - 3085544 + T 93 -13.6 -3.14564 | opp_overlap 3085525 GCAGTTATTCCACAA GGCCTGCA ATCT TGCAGGCC TTAATAACCGGCTAA TERM 3482 3085544 - 3085525 - T 95 -13.6 -3.33492 | opp_overlap 3085525 GCAGTTATTCCACAA GGCCTGCA ATCT TGCAGGCC TTAATAACCGGCTAA Spea_2535 3087783 - 3085561 - | isocitrate dehydrogenase, NADP-dependent TERM 3483 3088705 - 3088683 - g 71 -7.6 -3.97368 | CTGTGAAGGCAGAAA CCGTCAAGTG AGA CGCATGACGG CGCATATCGGTTTCC Spea_2536 3088087 - 3088821 + | pseudouridine synthase Spea_2537 3088832 - 3089284 + | NUDIX hydrolase Spea_2538 3089471 - 3090667 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 3484 3091210 - 3091161 - g 86 -2.8 -5.66338 | gap 1, opp_overlap 3091184 AAACACAACAAAAAA TTCGCGCCTTATTACTG-TCTGC CATGC GCAGCGCAGTGCTATGGCGCCAA TTAGGGGGCAAGCGT Spea_2539 3090671 - 3091288 + | hypothetical protein Spea_2540 3091320 - 3092690 + | adenylosuccinate lyase TERM 3485 3092777 - 3092731 - f 76 -8.9 -3.72576 | gap 1, opp_overlap 3092742, overlap 3092742 TCTTCGGCTATTAAA GGTTCGAAT-AAGGCGTTAAGC TTAG GCTTAACGCCTTTATTTTATCC ATTTTCCGTCGAGCG TERM 3486 3092742 - 3092765 + F 100 -15.4 -4.79683 | opp_overlap 3092731 3092742 TAAAGGTTCGAATAA GGCGTTAAGC TTAG GCTTAACGCC TTTATTTTATCCATT TERM 3487 3092765 - 3092742 - f 100 -15.4 -3.64283 | opp_overlap 3092742, overlap 3092731 TAAAGGTTCGAATAA GGCGTTAAGC TTAG GCTTAACGCC TTTATTTTATCCATT TERM 3488 3092792 - 3092804 + F 70 -2.7 -5.14965 | CATTTTCCGTCGAGC GTTTT TAT AGAAC TTTTTTCATCAAAGT Spea_2541 3092865 - 3093995 + | cupin 4 family protein TERM 3489 3094050 - 3094034 - T 91 -8 -5.27477 | opp_overlap 3094034 ATCTCAATCAAAAAA GGCATC CTAGT GATGCC TTTTTAGTACCGTAA TERM 3490 3094034 - 3094050 + T 84 -8 -4.7373 | opp_overlap 3094034 ATCTCAATCAAAAAA GGCATC CTAGT GATGCC TTTTTAGTACCGTAA Spea_2542 3094511 - 3094086 - | hypothetical protein TERM 3491 3094257 - 3094243 - G 78 -6.4 -4.69664 | CACATCATCGAAAAA TGACGC ACT GCATCA CGCGCTGTTGCGGCT TERM 3492 3094803 - 3094819 + G 84 -5.1 -5.32882 | TCATATCTCTTTCGA CGACC ATGAACA GGTCG TTTTTTGTCATGATA Spea_2543 3094774 - 3095805 + | Glu/Leu/Phe/Val dehydrogenase dimerisation region TERM 3493 3095849 - 3095825 - f 100 -13 -4.88711 | opp_overlap 3095825 ACAATACATTAAAAA TACCCAGCTT TTTTT AAGCTGGGTA TTTTTTTGCTTGCAA TERM 3494 3095825 - 3095849 + F 100 -13 -5.63103 | opp_overlap 3095825 ACAATACATTAAAAA TACCCAGCTT TTTTT AAGCTGGGTA TTTTTTTGCTTGCAA TERM 3495 3096219 - 3096209 - g 72 -3.2 -5.0065 | TATTTACAAACAAAA CAAC TTG GTCG CCAGCCTAAAACAAG Spea_2544 3095982 - 3096326 + | hypothetical protein Spea_2545 3096804 - 3096391 - | hypothetical protein Spea_2546 3097314 - 3096901 - | MarR family transcriptional regulator Spea_2547 3097914 - 3097471 - | hypothetical protein TERM 3496 3097965 - 3097995 + r 100 -20 -2.75481 | opp_overlap 3097973, overlap 3097973 GTTATAGCGTTATTA CGTAAAAACTAGCC AGA GGCTAGTTTTTACG TAATTAGAATTAGAG TERM 3497 3097973 - 3097987 + r 93 -10 -4.7078 | opp_overlap 3097973, overlap 3097965 GTTATTACGTAAAAA CTAGCC AGA GGCTAG TTTTTACGTAATTAG TERM 3498 3097987 - 3097973 - R 93 -10 -4.68593 | opp_overlap 3097973 3097965 GTTATTACGTAAAAA CTAGCC AGA GGCTAG TTTTTACGTAATTAG Spea_2548 3101055 - 3098005 - | FAD linked oxidase domain-containing protein TERM 3499 3101122 - 3101088 - R 91 -11.7 -3.99324 | gap 1, opp_overlap 3101090 3101097, overlap 3101097 TCTCAGCATTATAAA CA-AAAAAAAGCCGCT AAAT AGCGGCTTTTTTCATG TTTTTAACAAAATGT TERM 3500 3101090 - 3101119 + r 84 -12.3 -2.93708 | opp_overlap 3101088 3101097, overlap 3101097 TCAGCATTATAAACA AAAAAAAGCCGCT AAAT AGCGGCTTTTTTC ATGTTTTTAACAAAA TERM 3501 3101112 - 3101097 - R 100 -10.4 -6.28967 | opp_overlap 3101097 3101090, overlap 3101088 TATAAACAAAAAAAA GCCGCT AAAT AGCGGC TTTTTTCATGTTTTT TERM 3502 3101097 - 3101112 + r 100 -10.4 -5.38348 | opp_overlap 3101088 3101097, overlap 3101090 TATAAACAAAAAAAA GCCGCT AAAT AGCGGC TTTTTTCATGTTTTT Spea_2549 3103554 - 3101185 - | phosphoenolpyruvate synthase TERM 3503 3101747 - 3101758 + g 80 -5.8 -4.95547 | opp_overlap 3101746, overlap 3101742 CTTGCACCACGGAAG CCCA GCAT TGGG TTTTCTTCTTCTGGC TERM 3504 3103098 - 3103073 - G 70 -4.8 -4.49556 | CGGTCATTAAACAAA GAAGCAAATA CATGCT TAGTTGCTTC TAAAACGGCATCATA Spea_2550 3103681 - 3104493 + | hypothetical protein TERM 3505 3104523 - 3104550 + F 93 -13 -3.272 | opp_overlap 3104523 3104528, overlap 3104528 TTTATCTCCCCAAAA TTAAAGGCTTTT ATCA AAAAGCCTTTAA TTCATATCAAGTAAT TERM 3506 3104550 - 3104523 - f 100 -13 -4.08767 | opp_overlap 3104523 3104528, overlap 3104528 TTTATCTCCCCAAAA TTAAAGGCTTTT ATCA AAAAGCCTTTAA TTCATATCAAGTAAT TERM 3507 3104545 - 3104528 - f 82 -8.5 -4.19735 | opp_overlap 3104528 3104523, overlap 3104523 CTCCCCAAAATTAAA GGCTTTT ATCA AAAAGCC TTTAATTCATATCAA TERM 3508 3104528 - 3104545 + F 79 -8.5 -3.98282 | opp_overlap 3104523 3104528, overlap 3104523 CTCCCCAAAATTAAA GGCTTTT ATCA AAAAGCC TTTAATTCATATCAA TERM 3509 3105340 - 3105363 + G 71 -9.6 -3.2963 | AGATGGTGCAATGGC GGTTTACCGT ACTC ACGGTAACCC TTATGGCCACATCAT Spea_2551 3104684 - 3105751 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3510 3105816 - 3105792 - T 100 -12.9 -3.97636 | opp_overlap 3105792 AGCTTAATCTAGAAA CGTACCCACTC ACC GAGTCGGTACG TTTTTTTATATCTTA TERM 3511 3105792 - 3105816 + T 100 -12.9 -5.80248 | opp_overlap 3105792 AGCTTAATCTAGAAA CGTACCCACTC ACC GAGTCGGTACG TTTTTTTATATCTTA Spea_2552 3106598 - 3106152 - | GCN5-related N-acetyltransferase Spea_2553 3106930 - 3107358 + | thioesterase superfamily protein Spea_2554 3107611 - 3108270 + | two component LuxR family transcriptional regulator TERM 3512 3108306 - 3108322 + T 91 -8 -5.26316 | opp_overlap 3108306 GCACGACCAAAAAAA TCCGCT ATCGA AGCGGA TTTTTTATAAGCTCA TERM 3513 3108322 - 3108306 - T 100 -8 -5.55664 | opp_overlap 3108306 GCACGACCAAAAAAA TCCGCT ATCGA AGCGGA TTTTTTATAAGCTCA Spea_2555 3109643 - 3108354 - | FAD dependent oxidoreductase Spea_2556 3109992 - 3110324 + | hypothetical protein TERM 3514 3110336 - 3110369 + T 93 -11.2 -4.64657 | opp_overlap 3110343 ATAAGCATCCCCGCA TCATAAAGGCACAT TGGTAT ACGTGCCTTTATGA TTTTTAGACCTTTGA Spea_2557 3113818 - 3110390 - | histidine kinase TERM 3515 3110619 - 3110629 + g 79 -8.2 -4.25848 | opp_overlap 3110617 GCAAGGATAATATCG GGGG CTA CCCC TTTTAATCCGAGCTT TERM 3516 3113325 - 3113311 - G 76 -4.2 -4.93877 | overlap 3113321 3113322 TCGTACCAAATAAAA TGGCAA AAA TGGCCA AGATGGCAGTGATAA TERM 3517 3113521 - 3113511 - G 74 -5.4 -4.63218 | CGTGCGGCAATAAAA TCTG CAA CAGA GGTGATATTCTGTGC Spea_2558 3113995 - 3115947 + | acetyl-CoA synthetase TERM 3518 3115991 - 3116007 + F 100 -13.7 -5.63504 | overlap 3116003 GTTTGACCTCCCCTA GCCCCTC TAT GAGGGGC TTTTTTTGTCCCATT Spea_2559 3116131 - 3117873 + | type III restriction protein res subunit Spea_2560 3117970 - 3118236 + | glutaredoxin 1 TERM 3519 3118255 - 3118288 + T 91 -13.3 -3.06796 | opp_overlap 3118264, overlap 3118264 AAATGTTCAGATCAT CATAAAAAAGGAGGC CAAG GCCTCCTTTTTTGCG TTAGATAGACTAAAG TERM 3520 3118279 - 3118264 - T 100 -10.4 -5.32882 | opp_overlap 3118264 3118255 GATCATCATAAAAAA GGAGGC CAAG GCCTCC TTTTTTGCGTTAGAT TERM 3521 3118264 - 3118279 + T 93 -10.4 -5.16572 | opp_overlap 3118264, overlap 3118255 GATCATCATAAAAAA GGAGGC CAAG GCCTCC TTTTTTGCGTTAGAT Spea_2561 3119458 - 3118298 - | porin TERM 3522 3119430 - 3119410 - G 74 -11.1 -2.78495 | overlap 3119407 3119406 GAGCACTAAAACTCA CCGCGGCAA TTG TTGCTGCGG CTAAAACTGTTAACT TERM 3523 3119805 - 3119795 - R 75 -2.6 -5.21709 | TGTCACACTAAAAAA TATT TAA AATA GTGACCTAAAATCAA TERM 3524 3122015 - 3122001 - R 81 -7.2 -4.56597 | opp_overlap 3122001 CGTTTGTCTGAAAAA CAATCT AAG AGATTG TTTTATGAATAAATC TERM 3525 3122001 - 3122015 + r 78 -7.2 -4.431 | opp_overlap 3122001 CGTTTGTCTGAAAAA CAATCT AAG AGATTG TTTTATGAATAAATC Spea_2562 3122760 - 3122035 - | Tol-Pal system YbgF TERM 3526 3122721 - 3122696 - G 81 -13.3 -2.74701 | overlap 3122693 3122718 ATATCCTCAACAGGA GCAGGTGCTGC GTAA GCAGAACCTGC AACTAGGATAATTGC Spea_2563 3123324 - 3122785 - | peptidoglycan-associated lipoprotein Spea_2564 3124671 - 3123349 - | beta-propeller repeat-containing to-pal system protein TolB Spea_2565 3125616 - 3124681 - | Tol-Pal system TolA TERM 3527 3125248 - 3125272 + g 93 -6.3 -5.65927 | overlap 3125258 TTTCTGTTTTAGCTG TGCAGCTTTCG CCG CGTCGGCTGCA TTTTTTGTTTCAATC Spea_2566 3126054 - 3125617 - | biopolymer transport TolR TERM 3528 3125873 - 3125839 - G 71 -10.1 -3.26366 | gap 1, opp_overlap 3125861, overlap 3125837 CACATCTAAGTAATA CTCCC-CCATGGCATC GATT GATGCCACAACGGGAG GCTTGCTATCTGCAG Spea_2567 3126743 - 3126054 - | Tol-Pal system TolQ Spea_2568 3127206 - 3126733 - | Pol-Pal system-associated acyl-CoA thioesterase TERM 3529 3127348 - 3127333 - R 93 -9 -5.24129 | opp_overlap 3127333 TTCGCCCATAAAAAA GGAAGC CGAA GCTTCC TTTTCAAGAGATTTA TERM 3530 3127333 - 3127348 + r 83 -9 -4.10453 | opp_overlap 3127333 TTCGCCCATAAAAAA GGAAGC CGAA GCTTCC TTTTCAAGAGATTTA Spea_2569 3129527 - 3127371 - | prolyl oligopeptidase TERM 3531 3128133 - 3128148 + g 72 -9 -3.49482 | ATAAGAGATCATCAT TGGCAC TTTC GTGCCA TCTTTGCTGCTATAA TERM 3532 3130036 - 3130062 + r 100 -13 -5.37043 | overlap 3130038 AATGATTTATTTTTG CGGCCCGCTTAC TAT GTAAGCGGGCTA TTTTTTATCTGCAAT TERM 3533 3130038 - 3130060 + r 100 -17.8 -4.31943 | overlap 3130036 TGATTTATTTTTGCG GCCCGCTTAC TAT GTAAGCGGGC TATTTTTTATCTGCA TERM 3534 3130140 - 3130121 - R 93 -7.1 -5.36441 | opp_overlap 3130119 3130121 TTTTCACATAAAAAA GCCCAGC AATTAA GCTAGGC TCTTTAAATATCTAA Spea_2570 3131031 - 3130162 - | OmpA/MotB domain-containing protein TERM 3535 3131516 - 3131496 - g 71 -3.9 -4.77925 | opp_overlap 3131495 3131497, overlap 3131488 3131497 AAAAAAGCGCAAAAA GCTGCGG GTTGTCA CCGCAGT ATTATTGTTGCTCAC Spea_2571 3131172 - 3131870 + | ribonuclease T TERM 3536 3131902 - 3131918 + F 100 -12.3 -5.2189 | opp_overlap 3131902 CACAAGAACAAAAAA GCTGCGA TAA TCGCAGC TTTTTTCATGCTTAA TERM 3537 3131918 - 3131902 - f 100 -12.3 -5.68489 | opp_overlap 3131902 CACAAGAACAAAAAA GCTGCGA TAA TCGCAGC TTTTTTCATGCTTAA TERM 3538 3132361 - 3132328 - g 83 -2.4 -5.64274 | overlap 3132329 CGATTTAGAAAAAAA GTACTTAGCCGAAC GCTCTG GTTCGCCAAAGTAA AAGGCACCATAAAGT Spea_2572 3131978 - 3132361 + | transposase TERM 3539 3133180 - 3133202 + G 71 -9.8 -3.14344 | opp_overlap 3133180 GAAGTACATAAAAAA GCCAGTCGGG AGT TCCAACTGGC TTAATAAAAACCGTC TERM 3540 3133202 - 3133180 - g 100 -11.3 -5.42131 | opp_overlap 3133180 GAAGTACATAAAAAA GCCAGTCGG GAGTT CCAACTGGC TTAATAAAAACCGTC Spea_2573 3132478 - 3133206 + | integrase catalytic region Spea_2574 3133867 - 3133262 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Spea_2575 3134184 - 3135503 + | Na+/H+ antiporter NhaC TERM 3541 3135551 - 3135522 - T 100 -14.5 -4.82678 | opp_overlap 3135529, overlap 3135529 CTAGAAAAATGAAAA CAAAAAAGGAGCC ATTT GGCTCCTTTTTTA CAATAGAATTTAGAC TERM 3542 3135529 - 3135544 + T 93 -10.4 -5.0538 | opp_overlap 3135529 3135522 AATGAAAACAAAAAA GGAGCC ATTT GGCTCC TTTTTTACAATAGAA TERM 3543 3135544 - 3135529 - T 100 -10.4 -5.85244 | opp_overlap 3135529, overlap 3135522 AATGAAAACAAAAAA GGAGCC ATTT GGCTCC TTTTTTACAATAGAA Spea_2576 3136214 - 3135588 - | uracil phosphoribosyltransferase TERM 3544 3136330 - 3136353 + H 72 -8.3 -3.56092 | opp_overlap 3136352, overlap 3136318 3136352 ATCGTGACCTCTGTC GCTAAGTTT ATTGAA AAACTTAGC TTTCGAGCCTACTCA Spea_2577 3136435 - 3137475 + | phosphoribosylaminoimidazole synthetase Spea_2578 3137475 - 3138119 + | phosphoribosylglycinamide formyltransferase TERM 3545 3138169 - 3138142 - T 84 -7 -4.84527 | opp_overlap 3138148, overlap 3138148 TTTAGATAGCAAAAA TACAAAGGCACC TGAC GGTGCCTTTTTT ATTCCATTTATAAAA TERM 3546 3138148 - 3138163 + T 100 -10.4 -5.52096 | opp_overlap 3138148 3138142 TAGCAAAAATACAAA GGCACC TGAC GGTGCC TTTTTTATTCCATTT TERM 3547 3138163 - 3138148 - T 91 -10.4 -4.58297 | opp_overlap 3138148, overlap 3138142 TAGCAAAAATACAAA GGCACC TGAC GGTGCC TTTTTTATTCCATTT Spea_2579 3140065 - 3138527 - | hypothetical protein TERM 3548 3140144 - 3140129 - R 75 -5.4 -4.6759 | opp_overlap 3140129 AAGAGCTGAATAAAA GCTGGT CAAT ACCAAC TCTGTCTGTAAGCAG Spea_2580 3142163 - 3140202 - | diguanylate cyclase TERM 3549 3141684 - 3141670 - G 72 -2.8 -5.02074 | TGATCCTGGAAAAAA TAAAGC GCA GCTTTG ACATTATATGCTCGC TERM 3550 3142132 - 3142113 - G 74 -7.2 -4.27316 | gap 1 GGCTCGAACTGAAAA CGAGCA-CA GCA TGATGCTCG ATAAAATAACAAATA TERM 3551 3142906 - 3142928 + G 70 -4.7 -4.37886 | overlap 3142907 GAAGAATGCTTTTAC ACCGCAGCG ATGGC CACTGCGGA TTTTCTCAAACATCA Spea_2581 3142705 - 3143451 + | UMP phosphatase Spea_2582 3143691 - 3145349 + | peptidase M28 TERM 3552 3145772 - 3145796 + F 85 -2.7 -5.85178 | opp_overlap 3145772 TGATGCTTTCAACCA GCCGACTTG CCACCCA CTTGTCGGC TTTTTTTTGCCTATT TERM 3553 3147045 - 3147024 - g 70 -2.3 -5.01732 | gap 1 AATTGCTGCAAAAAA GGTAGCCGAT GCC ATTGG-TACC ATTCACCATGAAATT TERM 3554 3147293 - 3147264 - g 75 -10.1 -3.65426 | gap 1, opp_overlap 3147268 3147271, overlap 3147256 3147283 CCATAAAGCGCCAAA CGCACAAGC-CTTC CAT GAAGAGCTTGTTCG TAAACTCGATAAACT TERM 3555 3147798 - 3147782 - g 73 -10.1 -3.41878 | overlap 3147786 GCCTGCAAGGCATAA TCGACCC ATC GGGCCGA GCGGTACAATCGGTA Spea_2583 3146167 - 3147831 + | asparagine synthetase B TERM 3556 3147854 - 3147876 + T 73 -9.8 -3.14564 | opp_overlap 3147854 TCTGAACACAAAAAA GCCAGTCGGG AGT TCCAACTGGC TTAATAAAACCATCA TERM 3557 3147876 - 3147854 - T 100 -11.3 -5.47159 | opp_overlap 3147854 TCTGAACACAAAAAA GCCAGTCGG GAGTT CCAACTGGC TTAATAAAACCATCA Spea_2584 3148439 - 3147915 - | tRNA/rRNA methyltransferase (SpoU) Spea_2585 3148772 - 3148503 - | YfcL protein Spea_2586 3150022 - 3148901 - | ATP-NAD/AcoX kinase TERM 3558 3149463 - 3149453 - G 72 -8.2 -3.76379 | TAACATCTCACCAAA GCGC TTA GCGC GTACCACACCGGTCC Spea_2587 3151216 - 3150053 - | major facilitator transporter TERM 3559 3150122 - 3150110 - G 74 -3.4 -5.05601 | TAGCATAGATAAAAA TGCA CAGGC TGCA GCAAAAATCCAGGTA TERM 3560 3151203 - 3151167 - G 74 -5.9 -4.5815 | gap 1, opp_overlap 3151170, overlap 3151169 3151170 AAGAAAAAGAAATAA CAGGCACAGAGCCAGC GAAGTT GCTG-CTCTGTGCTTT TGGGTTGAAACATCA TERM 3561 3151201 - 3151169 - G 74 -8.5 -3.84447 | gap 1, opp_overlap 3151170, overlap 3151167 3151170 GAAAAAGAAATAACA GGCACAGAGCCAGC GAAGTT GCTG-CTCTGTGCT TTTGGGTTGAAACAT TERM 3562 3151200 - 3151170 - G 77 -12 -2.88228 | gap 1, opp_overlap 3151170, overlap 3151169 3151167 AAAAAGAAATAACAG GCACAGAGCCAGC GAAGTT GCTG-CTCTGTGC TTTTGGGTTGAAACA TERM 3563 3151170 - 3151200 + g 95 -12.7 -4.27316 | gap 1, opp_overlap 3151170 3151169 3151167 AAAAAGAAATAACAG GCACAGAGCCAGCG AAGT TGCTG-CTCTGTGC TTTTGGGTTGAAACA Spea_2588 3152310 - 3151216 - | chorismate synthase TERM 3564 3151938 - 3151968 + g 77 -3.8 -5.14163 | opp_overlap 3151937 3151940, overlap 3151940 CGCGAGCAGATGAAC GACCGCCACCGCGA TAG TCGCGTTGACCGTA TTTTTGTTGGTAAGT TERM 3565 3151940 - 3151966 + g 72 -6.4 -4.19587 | opp_overlap 3151937 3151940, overlap 3151938 CGAGCAGATGAACGA CCGCCACCGCGA TAG TCGCGTTGACCG TATTTTTGTTGGTAA TERM 3566 3152429 - 3152406 - R 78 -11 -2.96395 | opp_overlap 3152404 ATGTAGGAGTACAGA TTGCCGCAGA CACG TCTGCGGCTA GAACCTATTATTCAC Spea_2589 3153381 - 3152437 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Spea_2590 3153461 - 3153991 + | hypothetical protein TERM 3567 3154082 - 3154115 + T 76 -4.7 -5.04082 | gap 1, opp_overlap 3154083, overlap 3154077 3154075 3154083 CCTGAAAGTAAAAAA AGTGAGTC-TTCTATA TAC TCTAGAATGACTCACC TTTTATTATTCTTTA TERM 3568 3154114 - 3154083 - T 100 -8.2 -5.72207 | gap 1, opp_overlap 3154082 3154077 3154075 3154083 CTGAAAGTAAAAAAA GTGAGTC-TTCTATA TAC TCTAGAATGACTCAC CTTTTATTATTCTTT Spea_2591 3154628 - 3154158 - | phosphohistidine phosphatase, SixA TERM 3569 3154927 - 3154913 - H 78 -4.2 -5.26316 | TTACCTTAGAAAAAA TGCCGT GTC AGGGCA TAGGCGCAAATAATT TERM 3570 3155470 - 3155457 - g 70 -2.3 -5.00267 | AAGTACAAAAAGAAA CGGTG AATC CAGCG CACCCGTTTTCAAAG TERM 3571 3156455 - 3156441 - g 72 -5.7 -4.52589 | opp_overlap 3156441 3156440 CTCGCCCAGATAAAA GTACC AATAA GGTAC CTGTTGTTGTTGCAC TERM 3572 3156517 - 3156531 + G 72 -5.6 -4.40605 | opp_overlap 3156517 3156512, overlap 3156518 GGATGATGAATTTAA CGTCCC AAA GGGACA TTTATATTTATCGCT Spea_2592 3154976 - 3157765 + | peptidase M16 domain-containing protein TERM 3573 3159795 - 3159805 + G 76 -4 -5.00616 | opp_overlap 3159795 3159803 AGAATAATCACTAAA GAAT TGA ATTC TTTTTTAGAACGCAA Spea_2593 3158031 - 3162341 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Spea_2594 3162440 - 3162766 + | hypothetical protein Spea_2595 3162781 - 3162897 + | hypothetical protein Spea_2596 3162925 - 3163041 + | hypothetical protein TERM 3574 3163070 - 3163107 + T 100 -21.7 -2.88758 | opp_overlap 3163075 3163082, overlap 3163072 3163075 3163082 GAGAGCTTATGCTCG GATAACAAAAAAGGAGC CTAG GCTCCTTTTTTGTTATC TCTATGACCCGTTGT TERM 3575 3163072 - 3163105 + T 100 -18.5 -2.99319 | opp_overlap 3163075 3163082, overlap 3163070 3163075 3163082 GAGCTTATGCTCGGA TAACAAAAAAGGAGC CTAG GCTCCTTTTTTGTTA TCTCTATGACCCGTT TERM 3576 3163102 - 3163075 - T 100 -15.8 -3.29511 | opp_overlap 3163075 3163072 3163070 3163082, overlap 3163082 CTTATGCTCGGATAA CAAAAAAGGAGC CTAG GCTCCTTTTTTG TTATCTCTATGACCC TERM 3577 3163075 - 3163102 + T 100 -15.8 -3.64198 | opp_overlap 3163075 3163082, overlap 3163072 3163070 3163082 CTTATGCTCGGATAA CAAAAAAGGAGC CTAG GCTCCTTTTTTG TTATCTCTATGACCC TERM 3578 3163095 - 3163082 - T 100 -8.1 -5.55769 | opp_overlap 3163082 3163075 3163072 3163070, overlap 3163075 TCGGATAACAAAAAA GGAGC CTAG GCTCC TTTTTTGTTATCTCT TERM 3579 3163082 - 3163095 + T 100 -8.1 -5.62045 | opp_overlap 3163075 3163082, overlap 3163075 3163072 3163070 TCGGATAACAAAAAA GGAGC CTAG GCTCC TTTTTTGTTATCTCT Spea_2597 3163329 - 3163132 - | hypothetical protein TERM 3580 3163463 - 3163480 + r 85 -8.4 -4.37247 | opp_overlap 3163463 AGTTCCCAAAAAAAA GCGGCA TCATGT TGCCGC TTTGTTAATTAGTTT TERM 3581 3163480 - 3163463 - R 100 -8.4 -5.75945 | opp_overlap 3163463 AGTTCCCAAAAAAAA GCGGCA TCATGT TGCCGC TTTGTTAATTAGTTT Spea_2598 3165662 - 3163542 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3582 3163875 - 3163887 + g 78 -4.8 -5.06414 | ATAGACAGTTTGATC GACC TCTTT GGTC TTTTTCTTACCGCCA Spea_2599 3166978 - 3165668 - | 3-ketoacyl-CoA thiolase TERM 3583 3167309 - 3167296 - H 93 -6.7 -5.38054 | CGGCACAAAGAAAAA TTGGC ACTA GCCAA ACCCTAAGGGAATTT TERM 3584 3167778 - 3167792 + G 73 -4.3 -4.77036 | GGTAAGCACAGCTAT CAGTT GCCTG AACTG TTTTTGGTCATGGCG Spea_2600 3167379 - 3168335 + | ATPase TERM 3585 3168351 - 3168371 + G 73 -9.7 -3.36273 | TGGTCAACTCTGAAC TGCCGTTGT TTA GCGACGGCA TTAATATTACCGAAA Spea_2601 3168335 - 3169264 + | hypothetical protein Spea_2602 3169265 - 3169777 + | hypothetical protein Spea_2603 3169771 - 3170781 + | von Willebrand factor type A Spea_2604 3170784 - 3172745 + | TPR repeat-containing protein Spea_2605 3172739 - 3174373 + | hypothetical protein TERM 3586 3174396 - 3174435 + F 95 -11.7 -4.58395 | gap 1, opp_overlap 3174400, overlap 3174400 GCATAGCTAGACGCG AT-AAGCCGTTATCGACA ATTTA TGTCGATAACGGCTTTAA TTTTTAAGCACTGCA TERM 3587 3174400 - 3174430 + F 100 -18.5 -4.32046 | opp_overlap 3174400, overlap 3174396 AGCTAGACGCGATAA GCCGTTATCGACA ATTTA TGTCGATAACGGC TTTAATTTTTAAGCA TERM 3588 3174430 - 3174400 - f 100 -18.5 -3.3514 | opp_overlap 3174400 3174396 AGCTAGACGCGATAA GCCGTTATCGACA ATTTA TGTCGATAACGGC TTTAATTTTTAAGCA Spea_2606 3174628 - 3175191 + | RNA polymerase sigma factor Spea_2607 3175184 - 3175888 + | hypothetical protein TERM 3589 3175901 - 3175927 + F 85 -12.4 -3.20348 | opp_overlap 3175901 3175905, overlap 3175905 TAACAACCTTTACAA CCAATGATGCTT AAC ACGCATCATTGG TTAGATCTTCATCAC TERM 3590 3175927 - 3175901 - f 87 -12.4 -3.34947 | opp_overlap 3175901 3175905, overlap 3175905 TAACAACCTTTACAA CCAATGATGCTT AAC ACGCATCATTGG TTAGATCTTCATCAC TERM 3591 3176028 - 3176016 - f 73 -5.5 -4.6313 | TTGAAAATAAAAGAA GCGTG CAT CACAC ATGACAATTGAATTA Spea_2608 3176029 - 3177480 + | sodium/proline symporter TERM 3592 3177530 - 3177503 - f 75 -10 -3.22182 | opp_overlap 3177509, overlap 3177509 AGAGAGCAGAACAGA TAAAAAGCGTAC ACTT GTACGCTTTTTT TATTTTTACCCATCA TERM 3593 3177524 - 3177509 - f 90 -9 -5.12474 | opp_overlap 3177509, overlap 3177503 CAGAACAGATAAAAA GCGTAC ACTT GTACGC TTTTTTTATTTTTAC TERM 3594 3177509 - 3177524 + F 100 -9 -6.20267 | opp_overlap 3177509 3177503 CAGAACAGATAAAAA GCGTAC ACTT GTACGC TTTTTTTATTTTTAC TERM 3595 3177613 - 3177592 - f 71 -6.6 -4.07968 | overlap 3177595 TAACACACAACTAAA CAAGCTTG CTGCCT CAAGCCTG TGCTGGCTATAGTTT Spea_2609 3177827 - 3179146 + | membrane protein involved in aromatic hydrocarbon degradation TERM 3596 3179201 - 3179174 - f 85 -11.4 -3.31263 | opp_overlap 3179179, overlap 3179179 ATTGTATCTCGATAA CAAAAGCCGCAT ACCA ATGCGGCTTTTT ATTGTTTCATACCCT TERM 3597 3179196 - 3179179 - f 95 -11.3 -4.77567 | opp_overlap 3179179, overlap 3179174 ATCTCGATAACAAAA GCCGCAT ACCA ATGCGGC TTTTTATTGTTTCAT TERM 3598 3179179 - 3179196 + F 100 -11.3 -5.39905 | opp_overlap 3179179 3179174 ATCTCGATAACAAAA GCCGCAT ACCA ATGCGGC TTTTTATTGTTTCAT Spea_2610 3179409 - 3180497 + | RND family efflux transporter MFP subunit TERM 3599 3183091 - 3183073 - g 84 -7.5 -4.89339 | opp_overlap 3183072 AATCATCCATAAAAA CATGATC CCGAT GATCATG GTGGTTGCCGATATG Spea_2611 3180533 - 3183817 + | acriflavin resistance protein Spea_2612 3183878 - 3184096 + | hypothetical protein Spea_2613 3184121 - 3184516 + | rhodanese domain-containing protein TERM 3600 3184540 - 3184556 + F 90 -7.2 -5.27335 | opp_overlap 3184540 GCACATAGATTGAAA GGCCGC TTATT GTGGCC TTTTTATTTAGCGAC Spea_2614 3184657 - 3184974 + | hypothetical protein Spea_2615 3185856 - 3185044 - | hypothetical protein Spea_2616 3186584 - 3185955 - | GTP cyclohydrolase II Spea_2617 3187156 - 3186800 - | hypothetical protein TERM 3601 3187225 - 3187204 - R 95 -8.7 -5.38054 | opp_overlap 3187204 3187203, overlap 3187206 GTTTAGAAACAAAAA CAGCATCAG TGAA CTGATGCAG CTTTGTCATTATTGC TERM 3602 3187223 - 3187206 - R 90 -9.9 -4.31946 | opp_overlap 3187204 3187203, overlap 3187204 TTAGAAACAAAAACA GCATCAG TGAA CTGATGC AGCTTTGTCATTATT Spea_2618 3187776 - 3187312 - | anaerobic ribonucleoside-triphosphate reductase activating protein TERM 3603 3187819 - 3187846 + r 93 -11.4 -4.52589 | opp_overlap 3187824, overlap 3187824 CTTTAACTAGAAAAC AAAAAGGTGCTG AACA CAGCACCTTTTA TTTTATGTACACAAA TERM 3604 3187841 - 3187824 - R 100 -11.3 -5.56263 | opp_overlap 3187819 3187824 ACTAGAAAACAAAAA GGTGCTG AACA CAGCACC TTTTATTTTATGTAC TERM 3605 3187824 - 3187841 + r 100 -11.3 -5.23292 | opp_overlap 3187824, overlap 3187819 ACTAGAAAACAAAAA GGTGCTG AACA CAGCACC TTTTATTTTATGTAC Spea_2619 3190030 - 3187913 - | anaerobic ribonucleoside triphosphate reductase Spea_2620 3191115 - 3190435 - | hypothetical protein TERM 3606 3190556 - 3190566 + g 80 -6.8 -4.64657 | TGGTCCACTTGCGTT TCGC TCA GCGA TTTTTCCGAGTTTAA Spea_2621 3191660 - 3191196 - | MarR family transcriptional regulator TERM 3607 3191756 - 3191722 - H 71 -6.5 -4.19953 | opp_overlap 3191725, overlap 3191723 CATCTAAGCTCAAAA CTAGTTTGCGAGCAA TTATT TTGCGCGCAAAGTAA TTGCAAAATAAATTT Spea_2622 3191827 - 3192825 + | alcohol dehydrogenase TERM 3608 3192831 - 3192817 - T 72 -8.6 -3.54307 | AAGATGGTGGTTAAA CTTGCT TGA AGCAAG CTAGAAAGTCCACTG TERM 3609 3192964 - 3192918 - T 79 -10.5 -3.5764 | gap 2, opp_overlap 3192920 3192921 3192924 3192928 3192935, overlap 3192919 3192922 3192935 AAGCTTATCTGGAAA GCTATAGGCATAAAAAAGGCGCA CAA CGCGCCTTTTTTATGTCTA-A-C TTTCCCTTGCCACAT TERM 3610 3192964 - 3192919 - T 76 -10.7 -2.74263 | gap 1, opp_overlap 3192920 3192921 3192924 3192928 3192935, overlap 3192918 3192922 3192935 AGCTTATCTGGAAAG CTATAGGCATAAAAAAGGCGCA CAA CGCGCCTTTTTTATGTCTA-AC TTTCCCTTGCCACAT TERM 3611 3192920 - 3192964 + T 95 -13.8 -3.75332 | opp_overlap 3192918 3192919 3192922 3192935, overlap 3192921 3192924 3192928 3192935 GCTTATCTGGAAAGC TATAGGCATAAAAAAGGCGC ACAAC GCGCCTTTTTTATGTCTAAC TTTCCCTTGCCACAT TERM 3612 3192921 - 3192963 + T 100 -17.3 -2.84878 | opp_overlap 3192918 3192919 3192922 3192935, overlap 3192920 3192924 3192928 3192935 CTTATCTGGAAAGCT ATAGGCATAAAAAAGGCGC ACAAC GCGCCTTTTTTATGTCTAA CTTTCCCTTGCCACA TERM 3613 3192962 - 3192922 - T 100 -19.3 -2.64803 | opp_overlap 3192921 3192920 3192924 3192928 3192935, overlap 3192918 3192919 3192935 TTATCTGGAAAGCTA TAGGCATAAAAAAGGCGCA CAA CGCGCCTTTTTTATGTCTA ACTTTCCCTTGCCAC TERM 3614 3192924 - 3192960 + T 100 -19 -2.68071 | opp_overlap 3192922 3192918 3192919 3192935, overlap 3192921 3192920 3192928 3192935 ATCTGGAAAGCTATA GGCATAAAAAAGGCGC ACAAC GCGCCTTTTTTATGTC TAACTTTCCCTTGCC TERM 3615 3192928 - 3192956 + T 100 -14.8 -2.98356 | opp_overlap 3192922 3192918 3192919 3192935, overlap 3192924 3192921 3192920 3192935 GGAAAGCTATAGGCA TAAAAAAGGCGC ACAAC GCGCCTTTTTTA TGTCTAACTTTCCCT TERM 3616 3192935 - 3192949 + T 95 -8.5 -5.4251 | opp_overlap 3192922 3192918 3192919 3192935, overlap 3192928 3192924 3192921 3192920 TATAGGCATAAAAAA GGCGC ACAAC GCGCC TTTTTTATGTCTAAC TERM 3617 3192949 - 3192935 - T 93 -9.2 -5.29782 | opp_overlap 3192935 3192928 3192924 3192921 3192920, overlap 3192922 3192918 3192919 TATAGGCATAAAAAA GGCGCA CAA CGCGCC TTTTTTATGTCTAAC Spea_2623 3194048 - 3193062 - | patatin TERM 3618 3194453 - 3194473 + G 77 -3.9 -5.10461 | opp_overlap 3194453 GCGTCTTCTAAAACA GGCTCAGGT AAA ACATTAGCC TTTTTATTGCCTGCG TERM 3619 3194535 - 3194525 - g 72 -8.2 -3.78312 | overlap 3194513 AAAGCATTGAGTAAA CGCG ATC CGCG CGTGGTCATTCTATT TERM 3620 3195560 - 3195543 - g 89 -4.7 -5.7946 | opp_overlap 3195554, overlap 3195554 3195555 CCGCTAAGAAAAAAA CCGCAGC AAAA GCGGCAG CCAATCGTGATAGAC Spea_2624 3194312 - 3195658 + | DEAD/DEAH box helicase domain-containing protein TERM 3621 3195699 - 3195724 + F 93 -9 -5.28176 | opp_overlap 3195699 AGCATCCACTGCAAA GCCGCAATGA GTCATA TCACTGCGGC TTTTTTGTGACTAAG TERM 3622 3195724 - 3195699 - f 88 -11.2 -3.61356 | opp_overlap 3195699 AGCATCCACTGCAAA GCCGCAATGA GTCATA TCACTGCGGC TTTTTTGTGACTAAG TERM 3623 3196026 - 3196042 + F 82 -3.8 -5.49809 | CGAGAAATAGCGCTA CAATAT CGGCA ATATTG TTTTTTTAAGGTTTA Spea_2625 3196060 - 3196503 + | hypothetical protein TERM 3624 3196533 - 3196551 + F 100 -8.8 -5.71712 | opp_overlap 3196532 3196533 ACTGTAGATACTAAT GGGCGC ACTAACA GCGCCC TTTTTTTATCTAAAA TERM 3625 3196903 - 3196888 - g 79 -2.6 -5.40004 | GATTAAAGCAAAAAA TGAAAT CCGC ATCTCA TCACGGCTTAAAAAG Spea_2626 3196592 - 3197098 + | hypothetical protein TERM 3626 3197132 - 3197099 - f 83 -11.9 -3.12847 | opp_overlap 3197100 AACCCTTATACTTAA TGTGATTAGCCAAAA CAGA TCTTGGCTAATCACT TCACTCCCCTAAGAT TERM 3627 3197100 - 3197131 + F 91 -13.2 -3.06796 | opp_overlap 3197099 ACCCTTATACTTAAT GTGATTAGCCAAAA CAGA TCTTGGCTAATCAC TTCACTCCCCTAAGA Spea_2627 3197346 - 3197744 + | hypothetical protein Spea_2628 3198983 - 3198003 - | hypothetical protein Spea_2629 3199577 - 3199305 - | integron integrase TERM 3628 3199768 - 3199743 - H 74 -6.3 -4.37886 | opp_overlap 3199744 TTACGCTCGATAAAA TTCAAAAACTT TGAT AAGTTATTGAA ATAAAGATATTTAGT Spea_2630 3199976 - 3200605 + | hypothetical protein TERM 3629 3201275 - 3201245 - T 71 -7.6 -3.887 | gap 1, opp_overlap 3201250 3201255 ACACATAACGAATAA GGAT-AGGCCGCG CGTAGC CGCGTCCTTATCC CGAGTGTTGAACAAG TERM 3630 3201331 - 3201350 + T 73 -10 -2.75844 | opp_overlap 3201330 3201331, overlap 3201330 3201333 TTATATAGTAAATAG CGGCGTGA GAGC TCACGCTG GTTTAGCGTCGGGGA Spea_2631 3202364 - 3201528 - | putative transposase TERM 3631 3201622 - 3201638 + g 91 -10.9 -4.28254 | opp_overlap 3201620 3201616 CAGCAAGGACAAGGC CGCATTG CTG CAATGCG TTTTGCCTCTTCGAC TERM 3632 3202775 - 3202800 + r 72 -9.1 -3.3353 | opp_overlap 3202780, overlap 3202780 CTCTTACTCACAAAC AAAAAGCCATC ATTT GATGGCTTTTA TCTATTTCTGGGCAG TERM 3633 3202795 - 3202780 - R 95 -9 -5.38958 | opp_overlap 3202780 3202775 ACTCACAAACAAAAA GCCATC ATTT GATGGC TTTTATCTATTTCTG TERM 3634 3202780 - 3202795 + r 89 -9 -4.76423 | opp_overlap 3202780, overlap 3202775 ACTCACAAACAAAAA GCCATC ATTT GATGGC TTTTATCTATTTCTG TERM 3635 3202827 - 3202845 + r 70 -9.6 -2.73542 | GCAGGACTCGCTTTA CTGGACTT TAC AGGTCCAG TAATTGAGCATTAAG Spea_2632 3204112 - 3202856 - | peptidase M23B TERM 3636 3203047 - 3203068 + g 74 -8.7 -3.85698 | gap 1 ACAGTCCAATAACTT GGCCGCGCGA GAC TCGC-TGGCC TTTATGGACAAGGAA TERM 3637 3204347 - 3204301 - R 95 -6.1 -5.58454 | opp_overlap 3204304, overlap 3204304 TGTAGACTAAAAAAA TTATCCCATTGTATTTGTTTA ATAAA CAAACAGACACAATAGGATTA ATTAGCTTTAACGCG Spea_2633 3207427 - 3204371 - | SMC domain-containing protein Spea_2634 3208569 - 3207424 - | nuclease SbcCD, D subunit TERM 3638 3208635 - 3208647 + H 70 -7.7 -3.72695 | TGCTAAGACTGAGCG CGGTA AGT TACCG TTTGATAAAGCAGAT Spea_2635 3208916 - 3210166 + | valine--pyruvate transaminase TERM 3639 3210286 - 3210231 - f 100 -25.1 -3.45602 | opp_overlap 3210231 ATTAAATACCGATAA GCGATTGCTCAGGTTTCTAGTCAGA ACTAGA TCTGACTAGAAACCTGAGTCATCGC TTACTTGTCTAGCTA TERM 3640 3210231 - 3210286 + F 100 -27.3 -3.50332 | opp_overlap 3210231 ATTAAATACCGATAA GCGATTGCTCAGGTTTCTAGTCAGA ACTAGA TCTGACTAGAAACCTGAGTCATCGC TTACTTGTCTAGCTA TERM 3641 3212224 - 3212212 - g 77 -9.1 -3.84185 | opp_overlap 3212210 GGCAGGTAAAGACAA CGGCA GTA TGCCG ACCTTCTTTATGAAT Spea_2636 3210593 - 3214873 + | inner membrane lipoprotein TERM 3642 3214928 - 3214961 + T 100 -15.5 -3.05046 | opp_overlap 3214933, overlap 3214933 AAGACAGCTTAAGTA AAAAAGCCCCTTAGT TAGC ACTAAGGGGCTTTTA ATTTTAAGGAGCTAG TERM 3643 3214933 - 3214956 + T 100 -15.4 -4.67038 | opp_overlap 3214933, overlap 3214928 AGCTTAAGTAAAAAA GCCCCTTAGT TAGC ACTAAGGGGC TTTTAATTTTAAGGA TERM 3644 3214956 - 3214933 - T 100 -15.4 -5.27477 | opp_overlap 3214933 3214928 AGCTTAAGTAAAAAA GCCCCTTAGT TAGC ACTAAGGGGC TTTTAATTTTAAGGA Spea_2637 3215883 - 3215044 - | Beta-lactamase Spea_2638 3216678 - 3215899 - | hypothetical protein TERM 3645 3216520 - 3216499 - G 74 -3.7 -5.03747 | gap 1, opp_overlap 3216499 AAAGCTCGCAAAAAA GCTACCA-CC ACA GGCTTGTAGC TTATTGGTCGCCAAT TERM 3646 3217661 - 3217612 - g 100 -15.2 -4.3586 | opp_overlap 3217611 3217610 TTATTGACACCAAAA TCGAGTAACCTGCCGTTAAAAG TGCAAT CTTTTATCGACTGGCTACTCGA ACTATTTAGCCCATA Spea_2639 3216799 - 3217689 + | LysR family transcriptional regulator Spea_2640 3219697 - 3217724 - | serine/threonine protein kinase TERM 3647 3219785 - 3219768 - R 89 -7 -5.24129 | opp_overlap 3219768, overlap 3219778 TTTGGGCACAAAAAA GCCACT AATATA AGTGGC TTATTTTGAAAAGAT TERM 3648 3219768 - 3219785 + r 73 -7 -4.17316 | opp_overlap 3219768 3219778 TTTGGGCACAAAAAA GCCACT AATATA AGTGGC TTATTTTGAAAAGAT Spea_2641 3220199 - 3219813 - | hypothetical protein Spea_2642 3220449 - 3220219 - | RNA-binding S4 domain-containing protein Spea_2643 3221053 - 3220520 - | GCN5-related N-acetyltransferase TERM 3649 3221013 - 3220992 - G 79 -3.1 -5.39721 | TGAGTATATAAAAAA TTATCCCAA TCAC TTGAAATAA CACTTCTTAACCTGA Spea_2644 3221366 - 3221088 - | PpiC-type peptidyl-prolyl cis-trans isomerase Spea_2645 3223332 - 3221500 - | hypothetical protein TERM 3650 3222138 - 3222101 - G 71 -10.5 -2.74012 | opp_overlap 3222101 CCAGGACGTGAACCA TCTACTGCAGGTGCATC ATAA GATGCGCCTGCCGCCGA TTGCTCTCTAAAGCT TERM 3651 3222101 - 3222138 + g 77 -10.5 -3.322 | opp_overlap 3222101 CCAGGACGTGAACCA TCTACTGCAGGTGCATC ATAA GATGCGCCTGCCGCCGA TTGCTCTCTAAAGCT Spea_2646 3223402 - 3223917 + | diguanylate cyclase TERM 3652 3223979 - 3223950 - T 84 -12.3 -3.00017 | opp_overlap 3223957, overlap 3223957 CTCAAATTCAAAGCA TAAAAAAGCCCCT AAAA AGGGGCTTTTTTC AACTTACAAAATTAT TERM 3653 3223957 - 3223972 + T 93 -10.4 -5.09426 | opp_overlap 3223950 3223957 TCAAAGCATAAAAAA GCCCCT AAAA AGGGGC TTTTTTCAACTTACA TERM 3654 3223972 - 3223957 - T 100 -10.4 -5.42265 | opp_overlap 3223957, overlap 3223950 TCAAAGCATAAAAAA GCCCCT AAAA AGGGGC TTTTTTCAACTTACA Spea_2647 3225238 - 3223991 - | tetratricopeptide domain-containing protein Spea_2648 3225861 - 3225241 - | TonB family protein Spea_2649 3226267 - 3225863 - | biopolymer transport protein ExbD/TolR Spea_2650 3226805 - 3226281 - | MotA/TolQ/ExbB proton channel TERM 3655 3226756 - 3226737 - G 71 -10 -3.1994 | overlap 3226747 TACACCAGCCACTAA CCAGAGGA CACT TCCTCCGG AGGCCATGAAGCCCC Spea_2651 3228160 - 3226805 - | MotA/TolQ/ExbB proton channel TERM 3656 3228005 - 3228021 + g 80 -6.5 -4.77157 | ATTTTTAAACTCTTG CTCACGC TTT GCGTTAG TTTTTGATGCATTAG Spea_2652 3228942 - 3228160 - | hypothetical protein TERM 3657 3229138 - 3229121 - R 85 -8.5 -4.40804 | opp_overlap 3229104 3229121 CATCATTTCACAAAA TGTTGAC CTGT GTCAACA TTTGGAACGGCCAAA TERM 3658 3229121 - 3229138 + r 72 -8.5 -3.53012 | opp_overlap 3229121, overlap 3229104 CATCATTTCACAAAA TGTTGAC CTGT GTCAACA TTTGGAACGGCCAAA TERM 3659 3229662 - 3229678 + r 100 -13.7 -4.11773 | opp_overlap 3229662 TGCTGCAATAAAAAA GCCACCC AGA GGGTGGC TTTTAAACACTATTT TERM 3660 3229678 - 3229662 - R 100 -13.7 -5.4505 | opp_overlap 3229662 TGCTGCAATAAAAAA GCCACCC AGA GGGTGGC TTTTAAACACTATTT Spea_2653 3232564 - 3229718 - | TonB-dependent receptor TERM 3661 3229803 - 3229825 + g 84 -10.6 -3.9009 | opp_overlap 3229802 3229805 GCATTAGTTGAAAGT GAGTTGCCAA CCA TTGGCGGCTC TTTATCAAATAGGTT TERM 3662 3231174 - 3231190 + g 73 -10.9 -2.65504 | opp_overlap 3231173 3231172, overlap 3231173 3231172 CACTCAGTATCAACC GCACCAA CTC TTGGTGC AATTTTTGGTGCAAG TERM 3663 3233376 - 3233361 - R 100 -10.4 -5.89947 | opp_overlap 3233361 TAAAGCCAAAAAAAA GCGCCT TAAT AGGCGC TTTAATCACTTTAAA TERM 3664 3233361 - 3233376 + r 84 -10.4 -3.82097 | opp_overlap 3233361 TAAAGCCAAAAAAAA GCGCCT TAAT AGGCGC TTTAATCACTTTAAA Spea_2654 3234612 - 3233401 - | porin Spea_2655 3237245 - 3234846 - | DNA polymerase II Spea_2656 3237346 - 3239418 + | ATP-dependent DNA helicase DinG TERM 3665 3239876 - 3239853 - g 90 -9.6 -4.4352 | opp_overlap 3239853 3239852 3239851 3239855 AAAAACAAAATGAAA CAGTGGTTAC AGGG GTTACCACTG GGTTTTTACGACGGC Spea_2657 3239427 - 3240200 + | hypothetical protein TERM 3666 3240242 - 3240223 - g 71 -7.2 -4.17023 | CGAATTAGTTCAAAA GCTCAAGT TACA ACTTAAGC AATTAGAGCAAGAGG Spea_2658 3240197 - 3240859 + | primosomal replication protein N'', putative Spea_2659 3240869 - 3241579 + | hypothetical protein TERM 3667 3241630 - 3241651 + G 79 -11.6 -3.137 | opp_overlap 3241627 CCCTCTAATCTATGA CGCCAGCT ACTCCA AGCTGGCG TTACCTCCTCTTCAT Spea_2660 3241610 - 3242524 + | histone deacetylase superfamily protein Spea_2661 3242568 - 3242828 + | hypothetical protein TERM 3668 3244631 - 3244606 - T 90 -11.3 -3.90318 | opp_overlap 3244611, overlap 3244611 CGATGATTCTATAAA CAAAAGCCCTT AAAA AAGGGCTTTTA TGGCTAATAACTAAG TERM 3669 3244626 - 3244611 - T 90 -9 -4.99645 | opp_overlap 3244611, overlap 3244606 ATTCTATAAACAAAA GCCCTT AAAA AAGGGC TTTTATGGCTAATAA TERM 3670 3244611 - 3244626 + T 86 -9 -4.43844 | opp_overlap 3244606 3244611 ATTCTATAAACAAAA GCCCTT AAAA AAGGGC TTTTATGGCTAATAA Spea_2662 3244972 - 3244655 - | helix-hairpin-helix repeat-containing competence protein ComEA Spea_2663 3245360 - 3246754 + | anion transporter TERM 3671 3246800 - 3246772 - T 73 -10.4 -2.91695 | opp_overlap 3246772, overlap 3246751 3246769 GCTAGGTTCAAACTA TTAGCCCTGC TTATCTTTG GCAGGGCTAA TTTCTGTTTCACTAC TERM 3672 3246772 - 3246800 + T 100 -12.5 -4.35044 | opp_overlap 3246751 3246769 3246772 GCTAGGTTCAAACTA TTAGCCCTGCTTA TCT TTGGCAGGGCTAA TTTCTGTTTCACTAC Spea_2664 3248025 - 3246844 - | cystathionine gamma-synthase TERM 3673 3247962 - 3247927 - G 83 -9.1 -4.32857 | overlap 3247928 GGTCTCAAATACAAA GGTCGCACTC-TGGCAC AAAG GTGTCACGAGTGCG-CC AGACTCATTAGCCTC TERM 3674 3248274 - 3248295 + r 85 -11.6 -3.29043 | opp_overlap 3248269 AGGATATAGATTTAC TAGGCCGC AGCTTG GCGGCCTA TTATGAACAGAGCTT Spea_2665 3249503 - 3248391 - | hypothetical protein TERM 3675 3248824 - 3248807 - G 70 -9.9 -3.04144 | TCGCCATGTCCAATA CTGCTAG AGGG CTAGCAG CCAATAGCAACGCTG TERM 3676 3249255 - 3249287 + g 71 -7.1 -4.04474 | gap 1 GCCCGTTAAACTGAT CCTGGC-AAGCCAG TTACGC TTGGTTTTGCCAGG TTTCTGTGGGGCTAT Spea_2666 3250969 - 3249524 - | protein of unknown function DUF463 YcjX family protein TERM 3677 3250304 - 3250290 - G 70 -4.9 -4.46854 | overlap 3250291 CCAGGTAACAATAAA CGCCC CGGTT GGGCA TAATAGAACCCATGG Spea_2667 3251435 - 3251046 - | phage shock protein C, PspC Spea_2668 3251730 - 3251503 - | phage shock protein B Spea_2669 3252436 - 3251759 - | phage shock protein A, PspA TERM 3678 3252919 - 3252931 + G 80 -6.9 -4.66609 | overlap 3252911 TTTTGAACGCGCCGA CGGCG GTA CGCTG TTTTTAGATGAGCTC TERM 3679 3253654 - 3253641 - g 73 -2.3 -5.18643 | TTAATCAAAAGAAAA CCGCA GAAC TGCTG GGATTAAGCTACCAT Spea_2670 3252614 - 3253714 + | Fis family transcriptional regulator TERM 3680 3254803 - 3254783 - g 74 -10.4 -3.17982 | opp_overlap 3254779 3254801, overlap 3254784 AGAAACGGCCATTAA GGCGACAG GCATG CTGCCGCC GCAATCTTGGGCTTA Spea_2671 3253779 - 3255407 + | extracellular solute-binding protein Spea_2672 3255407 - 3256438 + | binding-protein-dependent transport systems inner membrane component Spea_2673 3256425 - 3257315 + | binding-protein-dependent transport systems inner membrane component Spea_2674 3257320 - 3258327 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 3681 3258620 - 3258634 + G 79 -10 -3.67775 | opp_overlap 3258618, overlap 3258614 TCACTTAATCCAAGG CTCACC ATT GGTGAG TTATTAGATGAGCCT TERM 3682 3258834 - 3258819 - g 78 -6.2 -4.65895 | TGCTTGATCCAAAAA TCATCA TTGC TGATGA GGCTTTAACGGCTTT Spea_2675 3258308 - 3259093 + | ABC transporter related Spea_2676 3259273 - 3260475 + | trans-2-enoyl-CoA reductase TERM 3683 3260519 - 3260541 + T 100 -16.4 -5.45652 | opp_overlap 3260519 CTGTATTAAAGTAAA CGCCGCAATA TTT TATTGCGGCG TTTTTTATTGCGCCT TERM 3684 3260541 - 3260519 - T 100 -16.4 -4.10552 | opp_overlap 3260519 CTGTATTAAAGTAAA CGCCGCAATA TTT TATTGCGGCG TTTTTTATTGCGCCT TERM 3685 3261030 - 3261017 - T 100 -9.5 -5.60993 | opp_overlap 3261017 GCGCCCATAAAAAAA CCGGC CTAA GCCGG TTTTTTATGCCTCAT TERM 3686 3261017 - 3261030 + T 100 -9.5 -5.28778 | opp_overlap 3261017 GCGCCCATAAAAAAA CCGGC CTAA GCCGG TTTTTTATGCCTCAT Spea_2677 3262984 - 3261119 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3687 3261166 - 3261185 + g 72 -6.4 -4.28977 | TAGCTTTTAGTGACG CGATCACC GCAC GGTAATCG TTTTCACTGTATTGT TERM 3688 3263013 - 3263052 + r 72 -10.2 -2.72144 | opp_overlap 3263021, overlap 3263021 TGTTGCGATTAATAA AATAAAAAGGCGCATC ACTGTTTG GATGCGCCTTTTTGTA ATTTAAAGGAGGTGA TERM 3689 3263044 - 3263021 - R 100 -9.6 -5.62288 | opp_overlap 3263013 3263021 TTAATAAAATAAAAA GGCGCATC ACTGTTTG GATGCGCC TTTTTGTAATTTAAA TERM 3690 3263021 - 3263044 + r 93 -9.6 -5.04325 | opp_overlap 3263021, overlap 3263013 TTAATAAAATAAAAA GGCGCATC ACTGTTTG GATGCGCC TTTTTGTAATTTAAA TERM 3691 3263160 - 3263143 - R 82 -7.7 -4.59773 | opp_overlap 3263143 CTCTATTTGTAAAAA GCACTGC TAGT ACAGTGC TTTCCTACAATAGCC Spea_2678 3263474 - 3263202 - | histone family protein DNA-binding protein TERM 3692 3263252 - 3263263 + g 72 -5.8 -4.46493 | TAAATGCTGGAATGT TCGC TGCA GCGA TTTTGATCTCTTTAC TERM 3693 3263644 - 3263616 - R 100 -12.5 -4.22652 | overlap 3263617 GGATACTACTCAAAA CCAGTCACTCCAA GGG CTGGAGCGACTGA CTCTCCACAGACTTA TERM 3694 3263643 - 3263617 - R 93 -13.8 -3.13109 | overlap 3263616 GATACTACTCAAAAC CAGTCACTCCAA GGG CTGGAGCGACTG ACTCTCCACAGACTT Spea_2679 3266088 - 3263731 - | ATP-dependent protease La TERM 3695 3266187 - 3266203 + r 100 -12.3 -4.13945 | opp_overlap 3266187 GAACTGCATAAAAAA GGAGCCA TAT TGGCTCC TTTTAAACTCACAGT TERM 3696 3266203 - 3266187 - R 100 -12.3 -5.27923 | opp_overlap 3266187 GAACTGCATAAAAAA GGAGCCA TAT TGGCTCC TTTTAAACTCACAGT TERM 3697 3266242 - 3266253 + r 73 -7.2 -4.10934 | AGACGAGAAATTACT CCGC CGTG GCGG TTTGTGCTTCGTTAT Spea_2680 3267514 - 3266237 - | ATP-dependent protease ATP-binding subunit TERM 3698 3266409 - 3266421 + g 79 -9.1 -4.13654 | CGAAGACCACGAGCA CCCGT TTT ACGGG TTTGTGCTTTAAGGG Spea_2681 3268210 - 3267599 - | ATP-dependent Clp protease proteolytic subunit TERM 3699 3268233 - 3268262 + r 80 -10.7 -3.37056 | opp_overlap 3268233 3268259 TTCCCTAAATAAAAA TGGCCCGCATGAG GAAC CTCATACGAGCCA TTATAAATGGCTAAT TERM 3700 3268262 - 3268233 - R 100 -15.1 -5.27335 | opp_overlap 3268233, overlap 3268259 TTCCCTAAATAAAAA TGGCCCGCATGAG GAAC CTCATACGAGCCA TTATAAATGGCTAAT TERM 3701 3268270 - 3268282 + r 70 -7.7 -3.64822 | opp_overlap 3268259 3268270 ACGAGCCATTATAAA TGGCT AAT AGCCA TTTAAGTCAAGCGAT TERM 3702 3268282 - 3268270 - R 75 -7.7 -3.98214 | opp_overlap 3268270, overlap 3268259 ACGAGCCATTATAAA TGGCT AAT AGCCA TTTAAGTCAAGCGAT Spea_2682 3269604 - 3268300 - | trigger factor TERM 3703 3269811 - 3269843 + H 91 -12.1 -3.91716 | opp_overlap 3269820, overlap 3269820 GCGTGATTTACAGGC GTAAAAAAAGCGACC TAA GGTCGCTTTCTTAAC TTCTTTGCAGAATGA TERM 3704 3269820 - 3269834 + H 93 -11.4 -4.29977 | opp_overlap 3269820, overlap 3269811 ACAGGCGTAAAAAAA GCGACC TAA GGTCGC TTTCTTAACTTCTTT TERM 3705 3269834 - 3269820 - H 100 -11.4 -5.42862 | opp_overlap 3269811 3269820 ACAGGCGTAAAAAAA GCGACC TAA GGTCGC TTTCTTAACTTCTTT TERM 3706 3269974 - 3269996 + H 71 -9.8 -2.88544 | overlap 3269977 GATTCGAACCTGCGG CCACCCGCTT AGA AGGCGGGTGC TCTATCCAACTGAGC TERM 3707 3269977 - 3269993 + H 72 -10.1 -2.69468 | overlap 3269974 TCGAACCTGCGGCCA CCCGCTT AGA AGGCGGG TGCTCTATCCAACTG Spea_2683 3270626 - 3271480 + | methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 3708 3271641 - 3271615 - T 93 -9.5 -5.09895 | opp_overlap 3271620, overlap 3271620 TAGTTACTCAAAAAA GAAAAGCCTGC AATTA GCAGGCTTTTT TATGTTTTACATCCG TERM 3709 3271620 - 3271636 + T 100 -9.4 -5.63645 | opp_overlap 3271615 3271620 ACTCAAAAAAGAAAA GCCTGC AATTA GCAGGC TTTTTTATGTTTTAC TERM 3710 3271636 - 3271620 - T 100 -9.4 -5.43553 | opp_overlap 3271620, overlap 3271615 ACTCAAAAAAGAAAA GCCTGC AATTA GCAGGC TTTTTTATGTTTTAC Spea_2684 3273055 - 3271676 - | cysteinyl-tRNA synthetase Spea_2685 3273368 - 3273862 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 3711 3273886 - 3273922 + G 88 -14.6 -3.0264 | gap 1 CGATGCGCACTCTAT TTGTGGGCGATTTGCAC TTAA GTGCAGATCGCCC-CGA TATTACCCAAGCTTT Spea_2686 3273873 - 3274589 + | UDP-2,3-diacylglucosamine hydrolase TERM 3712 3274581 - 3274602 + T 95 -13.1 -3.52906 | overlap 3274579 ATCGAGCTTCCTTTC GGCAAGTAG TTAA CTACTTGCC TCTTTATCGACATGC Spea_2687 3275438 - 3274656 - | tRNA--hydroxylase Spea_2688 3275646 - 3276242 + | hypothetical protein TERM 3713 3276271 - 3276287 + T 100 -12.3 -5.09426 | opp_overlap 3276271 TTAAGCAACAAAAAA GCCGACA TGA TGTCGGC TTTTTTAGCCTTAAC TERM 3714 3276287 - 3276271 - T 100 -12.3 -5.5604 | opp_overlap 3276271 TTAAGCAACAAAAAA GCCGACA TGA TGTCGGC TTTTTTAGCCTTAAC Spea_2689 3277990 - 3276320 - | glutaminyl-tRNA synthetase TERM 3715 3278115 - 3278142 + r 82 -11.4 -3.10012 | opp_overlap 3278120, overlap 3278120 AAGCATTTATAGAGC AAAAAGCAGCGA ATCA TCGCTGCTTTTA TTACCTGATAACATT TERM 3716 3278120 - 3278137 + r 95 -11.3 -4.69053 | opp_overlap 3278120, overlap 3278115 TTTATAGAGCAAAAA GCAGCGA ATCA TCGCTGC TTTTATTACCTGATA TERM 3717 3278137 - 3278120 - R 95 -11.3 -4.84527 | opp_overlap 3278120 3278115 TTTATAGAGCAAAAA GCAGCGA ATCA TCGCTGC TTTTATTACCTGATA Spea_2690 3280466 - 3278172 - | ferrous iron transport protein B TERM 3718 3279981 - 3279995 + g 72 -2.8 -5.06414 | overlap 3279979 AACAAATTGCTCCTT GACCTT TTC AATGTC TTTTTCTTCACGAGA Spea_2691 3280698 - 3280459 - | FeoA family protein TERM 3719 3281108 - 3281093 - H 71 -7.6 -3.85296 | TGCATAATTAAAATA TCGCTT CTAA AAGCGA GTGGAGTGAATGATG TERM 3720 3281844 - 3281820 - g 82 -7.1 -4.87665 | opp_overlap 3281819 TGCCATGCAGAAAAA CGTGGTCCAAA ACT TTGGGAACACG CTCCTGTCACAGATA Spea_2692 3281121 - 3282080 + | cytochrome C family protein TERM 3721 3282233 - 3282222 - g 70 -2.2 -4.91712 | gap 1 GCTAACCGAGAAAAA GC-GG ATA CCAGC AAGTGGGAGTGTAAA Spea_2693 3282096 - 3284216 + | outer membrane protein, putative TERM 3722 3285582 - 3285571 - g 71 -7.2 -4.13654 | CCTGCAAATGATAAA GGCG CCCT CGCC CTTCAAGGTAAGCTT TERM 3723 3286161 - 3286207 + G 70 -9.5 -3.06261 | gap 2, opp_overlap 3286169, overlap 3286163 CGACGCCAGCGCAGG CACCGAAAGCTGCGCAACTTGTC ATG GACAAG--GCGCAGCGGTCGATG TGTTAAAGGTTCACC TERM 3724 3286199 - 3286169 - g 86 -11.3 -3.6682 | gap 2, opp_overlap 3286163 3286161 GCGCAGGCACCGAAA GCTGCGCAACTTGTC ATG GACAAG--GCGCAGC GGTCGATGTGTTAAA Spea_2694 3284311 - 3286233 + | decaheme cytochrome c MtrF Spea_2695 3286358 - 3288517 + | decaheme cytochrome c TERM 3725 3288568 - 3288543 - f 80 -10.5 -3.78775 | opp_overlap 3288548, overlap 3288548 TGCCTGACGATGAAA TAAAAGGAGGC TTTA GCCTCCTTTTT TATTGTGCCAAATTC TERM 3726 3288548 - 3288563 + F 100 -10.4 -5.55769 | opp_overlap 3288543 3288548 GACGATGAAATAAAA GGAGGC TTTA GCCTCC TTTTTTATTGTGCCA TERM 3727 3288563 - 3288548 - f 93 -10.4 -4.95484 | opp_overlap 3288548, overlap 3288543 GACGATGAAATAAAA GGAGGC TTTA GCCTCC TTTTTTATTGTGCCA TERM 3728 3288994 - 3288981 - f 71 -6.7 -4.13767 | CCCCTCATGCTAAAA GAGGT ATAA ACCTC ATAGCAGCTAACCTA Spea_2696 3289024 - 3291492 + | hypothetical protein TERM 3729 3291563 - 3291544 - f 91 -12.2 -4.08394 | opp_overlap 3291544 AGAGTGTCCCCAAAA GCGAGAAG TTAT CTTCTCGC TTTTTTTATGCCTTA TERM 3730 3291544 - 3291563 + F 100 -12.2 -5.66684 | opp_overlap 3291544 AGAGTGTCCCCAAAA GCGAGAAG TTAT CTTCTCGC TTTTTTTATGCCTTA Spea_2697 3291948 - 3294185 + | decaheme cytochrome c TERM 3731 3294225 - 3294241 + F 100 -13.7 -5.29846 | opp_overlap 3294225 CCGTTTAATCATAAA GGGAGGC TTA GCCTCCC TTTTTATTTGCAATT TERM 3732 3294241 - 3294225 - f 100 -13.7 -4.05446 | opp_overlap 3294225 CCGTTTAATCATAAA GGGAGGC TTA GCCTCCC TTTTTATTTGCAATT Spea_2698 3294567 - 3296582 + | decaheme cytochrome c TERM 3733 3296626 - 3296598 - f 95 -14 -3.75153 | opp_overlap 3296594 TTTGCGCAACTCAAA TGGACTCAAGTG TTAAC CACCTGAGTCCA AGAGTGTTGAAAAAA TERM 3734 3296641 - 3296660 + F 70 -9.2 -3.11292 | opp_overlap 3296642, overlap 3296640 AAGAGTGTTGAAAAA AGGGGGAG GCCT CTCCCCCA CTTTCTCTTCAAAAT TERM 3735 3296659 - 3296642 - f 100 -12.7 -5.02476 | opp_overlap 3296641 3296640 AGAGTGTTGAAAAAA GGGGGAG GCCT CTCCCCC ACTTTCTCTTCAAAA TERM 3736 3297286 - 3297259 - g 76 -4.8 -4.76041 | overlap 3297261 3297285 CATACTCAGCAAAAA GCTGACATGAAC AAGC GTTCAAGCCACC CAATGAAGTGGGCGC Spea_2699 3296698 - 3297684 + | cytochrome C family protein Spea_2700 3297697 - 3299796 + | outer membrane protein precursor MtrB TERM 3737 3299816 - 3299844 + F 75 -10.4 -3.14468 | opp_overlap 3299816 3299823, overlap 3299823 TAGTTTTAGTTAAAA CAAAAAACCCGC TTCAT GCGGGTTTTTTA TTGCCTATAATCGCC TERM 3738 3299844 - 3299816 - f 100 -12.6 -4.18494 | opp_overlap 3299816 3299823, overlap 3299823 TAGTTTTAGTTAAAA CAAAAAACCCGC TTCAT GCGGGTTTTTTA TTGCCTATAATCGCC TERM 3739 3299837 - 3299823 - f 100 -8.5 -5.80951 | opp_overlap 3299823 3299816, overlap 3299816 AGTTAAAACAAAAAA CCCGC TTCAT GCGGG TTTTTTATTGCCTAT TERM 3740 3299823 - 3299837 + F 95 -8.5 -5.49234 | opp_overlap 3299816 3299823, overlap 3299816 AGTTAAAACAAAAAA CCCGC TTCAT GCGGG TTTTTTATTGCCTAT TERM 3741 3300711 - 3300722 + G 74 -7.2 -4.36931 | GTCAGCTTTAATCGC GCCG TTAC CGGC TTTTGCTATGGCTTC Spea_2701 3300658 - 3301236 + | hypothetical protein TERM 3742 3301424 - 3301408 - g 70 -5.1 -4.49311 | opp_overlap 3301419, overlap 3301411 AGCACCAGGACAAAA GACCC ACCATAA GGGTC GCCCCTTCGATGATG TERM 3743 3301515 - 3301525 + G 80 -6.8 -4.63486 | overlap 3301509 3301508 AGCTGTTCGCCATCC TCCC GAT GGGA TTTTGTTACCCCGGT TERM 3744 3301707 - 3301695 - g 89 -4.1 -5.80951 | opp_overlap 3301695 ACTTAAAACAAAAAA TCAGC GTC ACTGA TTCTGTCGCTAACTG Spea_2702 3301259 - 3301861 + | hypothetical protein TERM 3745 3303040 - 3303051 + G 73 -2.2 -5.1356 | GTGACCTGCAGCAAT GTGC TAAT GTAC TTTTTATTCATCGAA Spea_2703 3302028 - 3303179 + | transcriptional regulator, CdaR Spea_2704 3303193 - 3303729 + | type IV pilin, putative Spea_2705 3304766 - 3303792 - | OmpA/MotB domain-containing protein Spea_2706 3305872 - 3304763 - | hypothetical protein TERM 3746 3304991 - 3305003 + g 72 -9.1 -3.64599 | GATCTCGGTGGCGCC GCCTG AGT CAGGC TTTAAACTATAGTCA Spea_2707 3306599 - 3305874 - | hypothetical protein Spea_2708 3309536 - 3306603 - | hypothetical protein TERM 3747 3308103 - 3308068 - G 74 -5.5 -4.58395 | gap 1, opp_overlap 3308075 CCTATGCTGTAAAAA CTCACATCGGCAGCCA TAAAC TGACTACCGTT-TGAG AAAGATGCATATTTG Spea_2709 3310066 - 3309533 - | hypothetical protein Spea_2710 3310681 - 3310103 - | hypothetical protein TERM 3748 3310747 - 3310734 - R 71 -3.8 -4.91852 | CTCAGCAAAAATAAA TGCC TAAACT GGCA ATAAATCACTTTCTT TERM 3749 3311065 - 3311022 - R 100 -15.5 -5.45802 | opp_overlap 3311022 3311021 GGCTGAAAATAAAAA GGCAGCGTTCAACCTATAC TCATTG GTATAAGCCAAACGCTGCC ATTTCATTGAGATAG Spea_2711 3314004 - 3311107 - | hypothetical protein TERM 3750 3313398 - 3313381 - G 72 -9.1 -3.64822 | opp_overlap 3313380 ACCTTGGTAGCTAAA GTCCCCC GCTT GGGAGAC GTCTGCTATGCCACT Spea_2712 3315257 - 3314328 - | hypothetical protein TERM 3751 3314429 - 3314442 + g 86 -4.5 -5.56568 | overlap 3314429 3314430 CGATAAGCTTACGCA TCCCT GCTA GGGGA TTTTTTTCCTCATAT TERM 3752 3314883 - 3314853 - G 85 -5.4 -5.37593 | opp_overlap 3314854, overlap 3314854 GGTTAAATTAAAAAA CTTGGCGCTACTCT CAC AGATCAACGCCAAT TTACGCAGATCCGTT TERM 3753 3314882 - 3314854 - G 76 -8.9 -3.81472 | opp_overlap 3314854, overlap 3314853 GTTAAATTAAAAAAC TTGGCGCTACTCT CAC AGATCAACGCCAA TTTACGCAGATCCGT TERM 3754 3316585 - 3316600 + G 79 -7.6 -4.48713 | overlap 3316564 GTCAGCTCTTGGCAT TGGCAT CTTT ATGCCA TTTATTGTTGCTGCA Spea_2713 3315554 - 3316912 + | gluconate transporter TERM 3755 3316931 - 3316956 + F 93 -13.4 -3.3452 | opp_overlap 3316931 CAAGCAGCTCTGAAA TAGGCGAGCA TAAAAC TGCTCGCCTA TTATCAACTAGTGTA TERM 3756 3316956 - 3316931 - f 95 -13.4 -3.56568 | opp_overlap 3316931 CAAGCAGCTCTGAAA TAGGCGAGCA TAAAAC TGCTCGCCTA TTATCAACTAGTGTA TERM 3757 3318004 - 3317993 - g 71 -7.2 -4.13767 | CTCTGCATGGTAAAA CGCC TATG GGCG TCGCCGGTGTCGCTA Spea_2714 3317068 - 3318222 + | glycerate kinase TERM 3758 3318876 - 3318886 + G 71 -6.8 -4.18019 | overlap 3318882 AGTACCATATTCCTG CTGC GCC GCAG TTTGTGTCTGATTAT TERM 3759 3320119 - 3320109 - g 75 -3.2 -5.24531 | AGTTTGTACAAAAAA CTCA GCG CGAG CAAGGCACCTCGTTT Spea_2715 3318677 - 3320323 + | pyridoxal-dependent decarboxylase TERM 3760 3320403 - 3320390 - T 100 -9.5 -5.46698 | opp_overlap 3320390 TCTAAAACGAAAAAA GCCCC AAAA GGGGC TTTAATCCGATAACA TERM 3761 3320390 - 3320403 + T 79 -9.5 -3.74693 | opp_overlap 3320390 TCTAAAACGAAAAAA GCCCC AAAA GGGGC TTTAATCCGATAACA Spea_2716 3321974 - 3320424 - | hypothetical protein Spea_2717 3323242 - 3322370 - | AraC family transcriptional regulator Spea_2718 3323498 - 3323869 + | hypothetical protein Spea_2719 3325482 - 3323983 - | diguanylate cyclase Spea_2720 3326480 - 3325479 - | basic membrane lipoprotein Spea_2721 3327746 - 3328504 + | hypothetical protein Spea_2722 3328529 - 3329527 + | hypothetical protein Spea_2723 3329500 - 3330129 + | hypothetical protein TERM 3762 3330142 - 3330161 + F 93 -10.8 -4.98255 | opp_overlap 3330140 3330139 3330137 3330144 TAAAACAAACTATTA GAGGCTAT TTTG ATAGCCTC TTTTTATACTTGGCA TERM 3763 3330480 - 3330468 - g 81 -3.4 -5.33405 | CTGACCAAACAAAAA GTGT CGAAT ACAC TGACAATAACACCGT TERM 3764 3330544 - 3330520 - g 72 -6.5 -4.3129 | opp_overlap 3330520 3330525 3330529 CATCGACTATGAAAA TAACACCGCTA CCA TATCGGTATTA CTTGATGCTGATGCT TERM 3765 3331116 - 3331100 - g 83 -9.5 -4.02334 | GAGCGACATGATAAA GCTTCTT TCA AAGAAGC TCAGGCCTTCGCTGA Spea_2724 3330191 - 3331750 + | lytic transglycosylase catalytic Spea_2725 3331771 - 3331941 + | hypothetical protein TERM 3766 3332436 - 3332426 - g 73 -4.6 -4.87592 | CTATATAGAAGAAAA CACC AAT GGCG ACTTCAGTAACCTAT Spea_2726 3331944 - 3332681 + | hypothetical protein TERM 3767 3332697 - 3332738 + T 71 -6.1 -4.21676 | opp_overlap 3332697 CCCTGTTAAACCAAA CTGTAAATTGGGTCT CATGACAGGTAA AGGTCCAATTTACAG TTTTCCCTCAGTTAT Spea_2727 3334554 - 3332821 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 3768 3333153 - 3333167 + g 79 -10 -3.78904 | opp_overlap 3333153 3333152 3333155 TCGCACGCAGATAAG CACCGA TAT TCGGTG TTGTTGGCTTTAATG TERM 3769 3333658 - 3333669 + g 76 -4.4 -5.0538 | opp_overlap 3333653 ATTTGCACAAGCCAG CATG GCGC CATG TTTTTTCGCCTCAGC Spea_2728 3334779 - 3335696 + | pseudouridine synthase TERM 3770 3335738 - 3335723 - T 93 -10.4 -5.01553 | opp_overlap 3335723 AAGCGATAAACAAAA GCCCAC AAAC GTGGGC TTCATATTATCCGTC TERM 3771 3335723 - 3335738 + T 77 -10.4 -3.42459 | opp_overlap 3335723 AAGCGATAAACAAAA GCCCAC AAAC GTGGGC TTCATATTATCCGTC Spea_2729 3336525 - 3335785 - | cytochrome B561 Spea_2730 3337397 - 3336732 - | glutathione S-transferase domain-containing protein Spea_2731 3337602 - 3338450 + | MscS mechanosensitive ion channel TERM 3772 3338472 - 3338491 + T 81 -7.1 -4.53602 | opp_overlap 3338472 TAATCCCTTGGAAAA CGCAGCG GTGCTA TGCTGCG TTTATTTCATATCAA Spea_2732 3338975 - 3338526 - | hypothetical protein TERM 3773 3339229 - 3339213 - R 100 -6.6 -5.60993 | opp_overlap 3339213 TTTCCCATAAAAAAA CAGCAA ATATA TTGCTG TTTTTTACGTCCATG TERM 3774 3339213 - 3339229 + r 85 -6.6 -5.09895 | opp_overlap 3339213 TTTCCCATAAAAAAA CAGCAA ATATA TTGCTG TTTTTTACGTCCATG Spea_2733 3340413 - 3339271 - | 3-beta hydroxysteroid dehydrogenase/isomerase Spea_2734 3342141 - 3340420 - | peptide synthase TERM 3775 3342092 - 3342115 + g 91 -11 -4.21812 | opp_overlap 3342092 GCAGCACTAACTAAA TGACGGCACA AATT TGCGCCGTCA TTGTTTTGAATCAAC TERM 3776 3342115 - 3342092 - G 95 -13.2 -3.97042 | opp_overlap 3342092 GCAGCACTAACTAAA TGACGGCACA AATT TGCGCCGTCA TTGTTTTGAATCAAC Spea_2735 3343052 - 3342147 - | alpha/beta hydrolase fold TERM 3777 3343113 - 3343133 + r 81 -11.2 -2.9732 | opp_overlap 3343113, overlap 3343110 CGAGTCAATTAAAAA GCCTACGT GTTAA ACGTAGGC TGGTTTCAATTACCA TERM 3778 3343133 - 3343113 - R 95 -11.2 -4.88407 | opp_overlap 3343113 3343110 CGAGTCAATTAAAAA GCCTACGT GTTAA ACGTAGGC TGGTTTCAATTACCA Spea_2736 3344192 - 3343143 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3779 3343965 - 3343937 - G 75 -9.5 -3.58726 | opp_overlap 3343937 3343936 CTCCGGTATAGACAA CGGCGCCAAGATC GCT GATCTGTACGCCG GTTTCATCGATAGCC TERM 3780 3344316 - 3344303 - R 79 -3.1 -5.4833 | opp_overlap 3344304, overlap 3344296 3344304 TGATTCAATAAAAAA CCTCA TTAC TGAGA TGTTTTAATCCAATC Spea_2737 3345874 - 3344453 - | hypothetical protein TERM 3781 3345849 - 3345870 + g 78 -11.6 -3.10545 | opp_overlap 3345849, overlap 3345846 CAGCCGTAAACAAAA CGAGCACC ATCATA GGTGCTCG TCATTTTAACATGTG TERM 3782 3345870 - 3345849 - G 100 -11.6 -4.87803 | opp_overlap 3345849 3345846 CAGCCGTAAACAAAA CGAGCACC ATCATA GGTGCTCG TCATTTTAACATGTG Spea_2738 3347091 - 3345901 - | methyl-accepting chemotaxis protein TERM 3783 3346957 - 3346941 - G 79 -2.9 -5.31275 | opp_overlap 3346955, overlap 3346955 CTTGACTATAAAAAA CCGTACT GAA ATCACGG CTAAATACCCGCATA Spea_2739 3347332 - 3347583 + | hypothetical protein TERM 3784 3347575 - 3347633 + T 77 -6.49999 -4.60487 | gap 4, opp_overlap 3347576 3347579 3347593, overlap 3347576 3347577 3347593 GCAGAGTCAGACGAA ---AT-CAGCTAGATAGTAAAAGAGCCGC TATAT GCGGCTCTTTTACTATCTAGCGGTATTAC TTTTTCAGCATACTC TERM 3785 3347576 - 3347629 + T 100 -23.6 -3.81256 | gap 1, opp_overlap 3347576 3347579 3347593, overlap 3347575 3347577 3347593 CAGAGTCAGACGAAA T-CAGCTAGATAGTAAAAGAGCCGC TATAT GCGGCTCTTTTACTATCTAGCGGTA TTACTTTTTCAGCAT TERM 3786 3347628 - 3347576 - T 100 -25.2 -3.85539 | opp_overlap 3347576 3347575 3347577 3347593, overlap 3347579 3347593 CAGAGTCAGACGAAA TCAGCTAGATAGTAAAAGAGCCGC TATAT GCGGCTCTTTTACTATCTAGCGGT ATTACTTTTTCAGCA TERM 3787 3347577 - 3347627 + T 100 -28.7 -3.48505 | opp_overlap 3347576 3347579 3347593, overlap 3347576 3347575 3347593 AGAGTCAGACGAAAT CAGCTAGATAGTAAAAGAGCCGC TATAT GCGGCTCTTTTACTATCTAGCGG TATTACTTTTTCAGC TERM 3788 3347625 - 3347579 - T 100 -29.9 -3.00138 | opp_overlap 3347577 3347576 3347575 3347593, overlap 3347576 3347593 AGTCAGACGAAATCA GCTAGATAGTAAAAGAGCCGC TATAT GCGGCTCTTTTACTATCTAGC GGTATTACTTTTTCA TERM 3789 3347593 - 3347611 + T 95 -11.7 -4.39166 | opp_overlap 3347579 3347576 3347593, overlap 3347577 3347576 3347575 AGCTAGATAGTAAAA GAGCCGC TATAT GCGGCTC TTTTACTATCTAGCG TERM 3790 3347611 - 3347593 - T 95 -11.7 -4.39568 | opp_overlap 3347593 3347577 3347576 3347575, overlap 3347579 3347576 AGCTAGATAGTAAAA GAGCCGC TATAT GCGGCTC TTTTACTATCTAGCG Spea_2740 3348004 - 3347630 - | hypothetical protein Spea_2741 3350438 - 3348453 - | choline/carnitine/betaine transporter TERM 3791 3350915 - 3350886 - R 77 -8.8 -3.91144 | gap 1, opp_overlap 3350894, overlap 3350894 TCTATAGCGCATAAA CAGAAAAAGCAGC TTATC GCTGCTTTTT-TG TATAAGTTAAGTCAA TERM 3792 3350908 - 3350894 - R 90 -7.1 -5.24799 | opp_overlap 3350894, overlap 3350886 GCATAAACAGAAAAA GCAGC TTATC GCTGC TTTTTTGTATAAGTT TERM 3793 3350894 - 3350908 + r 93 -7.1 -5.38951 | opp_overlap 3350886 3350894 GCATAAACAGAAAAA GCAGC TTATC GCTGC TTTTTTGTATAAGTT Spea_2742 3351722 - 3351012 - | transcriptional regulator PhoU TERM 3794 3351488 - 3351470 - G 72 -10.2 -2.83566 | overlap 3351469 3351463 ACACTAGACGCAAAT CGCTAGCC GCT GGCTGGCG CTTAGCAATGATACG Spea_2743 3352562 - 3351744 - | phosphate ABC transporter, ATPase subunit Spea_2744 3354246 - 3352594 - | phosphate ABC transporter, inner membrane subunit PstA Spea_2745 3356588 - 3354333 - | binding-protein-dependent transport systems inner membrane component Spea_2746 3356864 - 3357364 + | amino acid-binding ACT domain-containing protein TERM 3795 3357373 - 3357400 + T 100 -15.8 -2.74192 | opp_overlap 3357368 3357396, overlap 3357371 3357375 AGCTTAATTAGCATC GAGCCTGATTTA TTGT TAAATCAGGCTC TCATATTGAGAGCTA TERM 3796 3357375 - 3357398 + T 83 -12.6 -2.9155 | opp_overlap 3357368 3357396, overlap 3357373 3357371 CTTAATTAGCATCGA GCCTGATTTA TTGT TAAATCAGGC TCTCATATTGAGAGC Spea_2747 3358237 - 3357452 - | diguanylate cyclase TERM 3797 3358168 - 3358150 - G 74 -11 -2.93073 | GCGCGGTAATAAGGA GGACGACT TTT AGCCGTCC AAGGTTTTGAATTAT Spea_2748 3359419 - 3358517 - | LysR family transcriptional regulator Spea_2749 3359535 - 3360245 + | hypothetical protein TERM 3798 3360300 - 3360287 - T 80 -8.1 -4.323 | TGTAAATAGCTAAAA CTCGC TTTT GCGAG ATTAGAAAAAGATCG TERM 3799 3360387 - 3360358 - T 93 -12.9 -3.37796 | opp_overlap 3360359, overlap 3360342 3360359 GCTGAGGAGGCATAA CTCCGCACCAGCA ATAC TGCTAGTGCGGAT TAACTCAACAATAAC TERM 3800 3360359 - 3360386 + T 95 -14.2 -3.05816 | opp_overlap 3360342 3360358 3360359 CTGAGGAGGCATAAC TCCGCACCAGCA ATAC TGCTAGTGCGGA TTAACTCAACAATAA TERM 3801 3360386 - 3360359 - T 100 -16.4 -2.62463 | opp_overlap 3360359, overlap 3360342 3360358 CTGAGGAGGCATAAC TCCGCACCAGCA ATAC TGCTAGTGCGGA TTAACTCAACAATAA Spea_2750 3361742 - 3360516 - | hypothetical protein TERM 3802 3362110 - 3362099 - H 74 -4.4 -4.84311 | CGGTACATAAGAAAA TCGA CTCC TCGA AACTCACTTGCTTTT Spea_2751 3362314 - 3363132 + | glycoside hydrolase family protein TERM 3803 3363184 - 3363150 - f 84 -10.1 -3.92324 | TTTGCCAACAGTAAA CAGTGATTGCGAGCA GTTTG CGCTCAAAATCACTG CCGGTAGTTAATACC Spea_2752 3363498 - 3364316 + | hypothetical protein TERM 3804 3364380 - 3364339 - T 95 -14.7 -2.54371 | opp_overlap 3364350, overlap 3364350 AATGATCTTAATGTA TTAATTAAAAATGCCCTGC GGTT GCAGGGCATTTTTATTTGA ACACTCTCGGCGACT TERM 3805 3364369 - 3364350 - T 100 -13.6 -4.90266 | opp_overlap 3364350, overlap 3364339 TGTATTAATTAAAAA TGCCCTGC GGTT GCAGGGCA TTTTTATTTGAACAC TERM 3806 3364350 - 3364369 + T 100 -13.6 -5.27335 | opp_overlap 3364350 3364339 TGTATTAATTAAAAA TGCCCTGC GGTT GCAGGGCA TTTTTATTTGAACAC Spea_2753 3364947 - 3364417 - | hypothetical protein TERM 3807 3365136 - 3365116 - R 100 -12.6 -5.33026 | opp_overlap 3365116, overlap 3365131 TAACTCAAATAAAAA GCCGACTC ATAAA GAGTCGGC TCATAAAGAGTCGGC TERM 3808 3365116 - 3365151 + r 80 -10.4 -3.75169 | opp_overlap 3365116 3365131 TAACTCAAATAAAAA GCCGACTCATAAAGAG TCGG CTCATAAAGAGTCGGC TTTAGTCAGCTACTA TERM 3809 3365154 - 3365166 + r 73 -2 -5.2112 | overlap 3365164 ATAAAGAGTCGGCTT TAGT CAGCT ACTA TTTTTTAATAGTCTT Spea_2754 3368101 - 3365183 - | collagenase Spea_2755 3368886 - 3369479 + | lysine exporter protein LysE/YggA Spea_2756 3369500 - 3370066 + | hypothetical protein TERM 3810 3370164 - 3370183 + G 74 -5.6 -4.58395 | overlap 3370165 GTATTACGTGGTATG GGCTGGTC GTGA GACCGGCA TTTTTACGAGCTGGG TERM 3811 3370165 - 3370182 + G 70 -9.1 -3.34716 | overlap 3370164 TATTACGTGGTATGG GCTGGTC GTGA GACCGGC ATTTTTACGAGCTGG Spea_2757 3370138 - 3370902 + | ribonuclease H TERM 3812 3371135 - 3371107 - g 74 -3.9 -5.06414 | overlap 3371109 CTTTCTCAAGAAAAA CAGGAGACTAA AGATATG TTAGTCACCTA CAAGCGCTATACACG Spea_2758 3370984 - 3371403 + | hypothetical protein TERM 3813 3372364 - 3372343 - g 71 -10.2 -2.5955 | overlap 3372339 ATGGCCCATAACTTA CCAGTACG ATTACG CGTACTGG TACCTGCCGTTGAAA Spea_2759 3371557 - 3372918 + | leucyl aminopeptidase TERM 3814 3372930 - 3372967 + F 93 -10.7 -4.88067 | opp_overlap 3372937 3372940, overlap 3372931 CTAATTAGTACTCTT CCATGAATAAGGTCCGT TTAT ACAGGCCTTATTCATGC TTTTTATCACTAAAT TERM 3815 3372931 - 3372966 + F 100 -14.2 -3.52117 | opp_overlap 3372937 3372940, overlap 3372930 TAATTAGTACTCTTC CATGAATAAGGTCCGT TTAT ACAGGCCTTATTCATG CTTTTTATCACTAAA Spea_2760 3373287 - 3374360 + | hypothetical protein TERM 3816 3374449 - 3374432 - f 100 -12.7 -4.15061 | opp_overlap 3374432 TAAGTGATATACAAA GGCCTGC TTAT GCAGGCC TTTTTTATTAAATTT TERM 3817 3374432 - 3374449 + F 100 -12.7 -5.52096 | opp_overlap 3374432 TAAGTGATATACAAA GGCCTGC TTAT GCAGGCC TTTTTTATTAAATTT Spea_2761 3374543 - 3374851 + | transcriptional antiterminator, Rof TERM 3818 3374974 - 3374988 + F 70 -5.7 -4.36262 | TAGCATCAATCACTT TTGGC ACTTA GCCAA TTTTGATATGAATAT Spea_2762 3375009 - 3375488 + | hypothetical protein TERM 3819 3375504 - 3375475 - T 73 -7.2 -4.02719 | overlap 3375476 TGACTAAATACCAAA TGCAGAACCAAT AAATCA ATTGGCTCTGCC CCCGAAAAAGAACCA TERM 3820 3375503 - 3375476 - T 78 -10.7 -3.00908 | overlap 3375475 GACTAAATACCAAAT GCAGAACCAAT AAATCA ATTGGCTCTGC CCCCGAAAAAGAACC TERM 3821 3375557 - 3375517 - T 100 -14.4 -4.40561 | gap 2, opp_overlap 3375522 3375528, overlap 3375522 3375528 GCCCCCGAAAAAGAA CCA--AACAAAAAGAGCAGC TAA GCTGCTCTTTTTGTTGCTGG ACTCGAATAACGCTT TERM 3822 3375550 - 3375522 - T 100 -19.1 -4.25754 | opp_overlap 3375522 3375528, overlap 3375517 3375528 CGAAAAAGAACCAAA CAAAAAGAGCAGC TAA GCTGCTCTTTTTG TTGCTGGACTCGAAT TERM 3823 3375522 - 3375550 + T 100 -19.1 -3.16683 | opp_overlap 3375517 3375522 3375528, overlap 3375528 CGAAAAAGAACCAAA CAAAAAGAGCAGC TAA GCTGCTCTTTTTG TTGCTGGACTCGAAT TERM 3824 3375544 - 3375528 - T 100 -12.3 -5.39681 | opp_overlap 3375528 3375522, overlap 3375522 3375517 AGAACCAAACAAAAA GAGCAGC TAA GCTGCTC TTTTTGTTGCTGGAC TERM 3825 3375528 - 3375544 + T 100 -12.3 -5.1356 | opp_overlap 3375522 3375517 3375528, overlap 3375522 AGAACCAAACAAAAA GAGCAGC TAA GCTGCTC TTTTTGTTGCTGGAC Spea_2763 3376806 - 3375598 - | nucleoside transporter TERM 3826 3376371 - 3376361 - G 74 -8.2 -3.84246 | opp_overlap 3376361 GGCTTAACTAGTAAA GGCG ATT CGCC TTGGCTTAAGAAGAT TERM 3827 3376728 - 3376738 + g 71 -6.8 -4.07885 | opp_overlap 3376728, overlap 3376718 CCGTGCGCCACTTAA TCGC ATG GCGA TTTTCAGAAAAAATC Spea_2764 3378335 - 3377256 - | rod shape-determining protein RodA TERM 3828 3377364 - 3377349 - G 87 -6.8 -5.13473 | opp_overlap 3377355, overlap 3377350 3377351 ACCATAGCTAAAAAA GGGCAA TGGG CTGCCC ATTACTGGCAGTATA TERM 3829 3377584 - 3377574 - G 78 -5.4 -4.77173 | opp_overlap 3377574 GGTTGAGAAAATAAA GTCA GTG TGAC TTTCCGGGATGAATC TERM 3830 3378607 - 3378582 - R 83 -12.7 -2.79183 | opp_overlap 3378582 TTGAGTCGTATGATA TTACCGGATGC AATG ACATCCGGTAA TTTTGTGAACATCAG TERM 3831 3378582 - 3378607 + r 95 -12 -4.38712 | opp_overlap 3378582 TTGAGTCGTATGATA TTACCGGATG CAATGA CATCCGGTAA TTTTGTGAACATCAG Spea_2765 3379634 - 3378678 - | UspA domain-containing protein TERM 3832 3380038 - 3380017 - R 89 -5.9 -5.4833 | TCATTTAACAAAAAA GGATTAGCA AGAC TACTAACCC TTTTTGACTGTTCGT Spea_2766 3380564 - 3380079 - | glyoxalase/bleomycin resistance protein/dioxygenase Spea_2767 3381009 - 3381653 + | resolvase domain-containing protein Spea_2768 3381662 - 3382861 + | major facilitator transporter Spea_2769 3384068 - 3383175 - | AraC family transcriptional regulator TERM 3833 3384141 - 3384118 - R 86 -11.7 -3.35996 | opp_overlap 3384118 CACTTTCACGTACAA GGACACCGG CCTTGT CCGGTGCCC TAAAGTGAACAGTTT Spea_2770 3385714 - 3384155 - | hypothetical protein TERM 3834 3386078 - 3386068 - R 71 -6.8 -4.07618 | CGGTGAATAACCAAA CCAC ACT GTGG TGTAGCAAACTTTCT TERM 3835 3386195 - 3386180 - R 100 -10.4 -5.4251 | opp_overlap 3386180 TCCAGACACAAAAAA GCCCGA TTTC TCGGGC TTCTCTTTCATAAAG TERM 3836 3386180 - 3386195 + r 84 -10.4 -3.86252 | opp_overlap 3386180 TCCAGACACAAAAAA GCCCGA TTTC TCGGGC TTCTCTTTCATAAAG TERM 3837 3386241 - 3386218 - R 70 -3.2 -4.84529 | opp_overlap 3386221, overlap 3386221 TCATAAAGCTAAAAA CAAGGTCAAT AAAA ATTAACCTTC GATACCTTTGCTCGT TERM 3838 3386238 - 3386221 - R 71 -4.9 -4.50298 | opp_overlap 3386221, overlap 3386218 TAAAGCTAAAAACAA GGTCAAT AAAA ATTAACC TTCGATACCTTTGCT Spea_2771 3387801 - 3386233 - | ABC transporter related TERM 3839 3386289 - 3386306 + g 79 -9.9 -3.68529 | opp_overlap 3386288 TTCCCTTGAAATCAT TCACACC ATTT GGTGTGA TTTCAATAATACGGT TERM 3840 3387924 - 3387881 - R 89 -4.5 -5.58522 | overlap 3387915 TAGATAAAACAAAAA CCAGTAGAACGATACCGAG ATTGTG CCCGATAAAGACCTACTGG CCGAAGACTGACGCC Spea_2772 3390401 - 3388128 - | copper-translocating P-type ATPase TERM 3841 3390633 - 3390661 + G 76 -8.8 -3.72765 | opp_overlap 3390621, overlap 3390626 CAAGGCTCGATTGAG GCGCTGCAGTTT ATCCA ACACTGCCGCGC TTTAGGCTTTGCCTT Spea_2773 3390501 - 3390899 + | MerR family transcriptional regulator Spea_2774 3392938 - 3390905 - | peptidase S9 prolyl oligopeptidase Spea_2775 3393283 - 3393056 - | hypothetical protein TERM 3842 3393410 - 3393435 + r 84 -10.5 -3.88396 | opp_overlap 3393416, overlap 3393416 AAAAGTGCTGACATA AAAAAACGGGC CTAG GCCCGTTTTTA TCTTTTACTTTAAAG TERM 3843 3393429 - 3393416 - R 100 -9.5 -5.71712 | opp_overlap 3393410 3393416 GCTGACATAAAAAAA CGGGC CTAG GCCCG TTTTTATCTTTTACT TERM 3844 3393416 - 3393429 + r 100 -9.5 -5.30339 | opp_overlap 3393416, overlap 3393410 GCTGACATAAAAAAA CGGGC CTAG GCCCG TTTTTATCTTTTACT Spea_2776 3393581 - 3393456 - | short-chain dehydrogenase/reductase SDR Spea_2777 3394370 - 3393612 - | 3-ketoacyl-(acyl-carrier-protein) reductase Spea_2778 3395304 - 3394375 - | 3-hydroxyisobutyrate dehydrogenase Spea_2779 3396573 - 3395395 - | enoyl-CoA hydratase/isomerase TERM 3845 3396061 - 3396045 - G 71 -7.9 -3.91506 | opp_overlap 3396057, overlap 3396043 TCATTCCTAAAAATA GCCCGGA TTT TCCCGGC ATCCGATTTAAGAAA Spea_2780 3397364 - 3396573 - | enoyl-CoA hydratase Spea_2781 3398571 - 3397414 - | acyl-CoA dehydrogenase domain-containing protein TERM 3846 3398820 - 3398798 - R 72 -9.2 -3.33419 | overlap 3398796 AGCCCCAAACGAACA TTGCCACC GCAAAAG GGTGGCAA CAAGTTGTATTACTT Spea_2782 3400329 - 3398830 - | methylmalonate-semialdehyde dehydrogenase Spea_2783 3401697 - 3400507 - | acetyl-CoA acetyltransferase TERM 3847 3400875 - 3400902 + g 74 -11.2 -2.91274 | TTGTTGCCATTACTT CGAGGCCTAGCT CGGC AGCTTGGCCGCG TGTCATTAGCATCAG TERM 3848 3401998 - 3402022 + r 83 -10.8 -3.65224 | gap 1, opp_overlap 3401998 GGTAAAAACAAAAAA GCCGATA-CGC TGTA GCGGTATCGGC TTATTAGAGTGAAGT TERM 3849 3402022 - 3401998 - R 100 -10.8 -5.93252 | gap 1, opp_overlap 3401998 GGTAAAAACAAAAAA GCCGATA-CGC TGTA GCGGTATCGGC TTATTAGAGTGAAGT Spea_2784 3402990 - 3402046 - | homoserine O-succinyltransferase Spea_2785 3403468 - 3403067 - | hypothetical protein TERM 3850 3404304 - 3404279 - g 76 -7.5 -4.28548 | opp_overlap 3404279 AGCCATGCAGCAAAA CAGGCTATGGT TATC ACCACTGCCCG TAGTTGCCAGCCAAA Spea_2786 3403713 - 3404486 + | short-chain dehydrogenase/reductase SDR TERM 3851 3404541 - 3404508 - T 100 -19.9 -3.737 | opp_overlap 3404517, overlap 3404517 CAATTGTGTATGAAA CATAAAAAAGGAGCC TATT GGCTCCTTTTTTATG GGTGGGACTTGTCCA TERM 3852 3404532 - 3404517 - T 100 -10.4 -5.5762 | opp_overlap 3404517, overlap 3404508 ATGAAACATAAAAAA GGAGCC TATT GGCTCC TTTTTTATGGGTGGG TERM 3853 3404517 - 3404532 + T 100 -10.4 -5.28176 | opp_overlap 3404517 3404508 ATGAAACATAAAAAA GGAGCC TATT GGCTCC TTTTTTATGGGTGGG Spea_2787 3405217 - 3404570 - | outer membrane protein W TERM 3854 3404609 - 3404626 + g 73 -4.1 -4.91109 | CATGTAAACCCATGG GTCGATA TCTG TTTCGAC TTTTTGTGGTGCACC Spea_2788 3406422 - 3405700 - | hypothetical protein TERM 3855 3406512 - 3406494 - R 74 -6 -4.32233 | ACAAAAAGCTTAAAA GGAAACCA TTA TAGTCTCC AAAATCATTGCTATT Spea_2789 3407149 - 3406556 - | hypothetical protein TERM 3856 3407194 - 3407181 - R 93 -8.1 -5.4756 | opp_overlap 3407180 3407181 AAGTGTAATAAAAAA GGAGC CGAA GCTCC ATTAATACTGATTGA Spea_2790 3407626 - 3407228 - | hypothetical protein Spea_2791 3408536 - 3407670 - | acyl-CoA thioesterase II TERM 3857 3408409 - 3408391 - G 81 -13.2 -2.65264 | TCAGGACTCACAGTA CGCTTAGC CGC GCTAAGCG CTTGCCCCATGACTT TERM 3858 3408470 - 3408437 - G 79 -11.1 -3.36515 | opp_overlap 3408448, overlap 3408448 3408454 CTTGACCGCCAAAGA CATGCCCAAAACCAA GATC TTGGCTTTGGCCACG AAACAGCCCCTCTTC Spea_2792 3409538 - 3408603 - | short-chain dehydrogenase/reductase SDR Spea_2793 3409881 - 3410765 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 3859 3411060 - 3411113 + T 100 -14.3 -3.42078 | gap 1, opp_overlap 3411077, overlap 3411063 3411065 3411077 CTAAACTCTGTACGA GAC-TCGATGACAAAAAAGCCTATCA ATT TGATAGGCTTTTTTATTATCTATGTC TTGTCCTGAAATATG TERM 3860 3411063 - 3411109 + T 100 -14.8 -3.20322 | opp_overlap 3411077, overlap 3411060 3411065 3411077 AACTCTGTACGAGAC TCGATGACAAAAAAGCCTATCA ATT TGATAGGCTTTTTTATTATCTA TGTCTTGTCCTGAAA TERM 3861 3411065 - 3411107 + T 100 -17.4 -3.16203 | opp_overlap 3411077, overlap 3411063 3411060 3411077 CTCTGTACGAGACTC GATGACAAAAAAGCCTATCA ATT TGATAGGCTTTTTTATTATC TATGTCTTGTCCTGA TERM 3862 3411095 - 3411077 - T 100 -11.8 -5.31275 | opp_overlap 3411065 3411063 3411060 3411077 CTCGATGACAAAAAA GCCTATCA ATT TGATAGGC TTTTTTATTATCTAT TERM 3863 3411077 - 3411095 + T 100 -11.8 -5.62045 | opp_overlap 3411077, overlap 3411065 3411063 3411060 CTCGATGACAAAAAA GCCTATCA ATT TGATAGGC TTTTTTATTATCTAT Spea_2794 3412665 - 3411130 - | 6-phosphogluconate dehydrogenase Spea_2795 3414958 - 3413054 - | AMP-dependent synthetase and ligase TERM 3864 3413789 - 3413806 + g 72 -5.5 -4.45117 | overlap 3413805 AGTTTCAGTCTGCCA CCAGTGA TCTA TCACGGG TTTATTTAACCTATC Spea_2796 3415330 - 3415728 + | MerR family transcriptional regulator Spea_2797 3415858 - 3417027 + | acyl-CoA dehydrogenase domain-containing protein TERM 3865 3417061 - 3417082 + G 88 -12.3 -3.60412 | gap 1, opp_overlap 3417060 3417059 CTAAGGTGGACAATT GGGCGCTCGC ATA GCGA-CGCCC TTATATCTCAGCTTC Spea_2798 3417059 - 3418720 + | propionyl-CoA carboxylase TERM 3866 3419282 - 3419300 + G 78 -11.6 -3.00298 | GACCCGCGCCATGGG GCAGCGCG CAG CGCGCCGC TATATGCTTACCGCC TERM 3867 3419386 - 3419396 + G 79 -8.2 -4.25056 | ATGACCTAGACGCAG CGGC TCA GCCG TTTATTGATGCGCTA TERM 3868 3419522 - 3419506 - g 73 -11.5 -2.66634 | opp_overlap 3419506 3419505, overlap 3419491 3419489 3419503 CACTGGACCATACCA GCGAGCG GAT CGCCCGC ATTCGTGTATCAGAG Spea_2799 3418779 - 3419657 + | enoyl-CoA hydratase/isomerase Spea_2800 3419659 - 3421749 + | carbamoyl-phosphate synthase L chain ATP-binding TERM 3869 3422344 - 3422397 + G 79 -9.8 -3.72695 | gap 3 AAAGGCTTGGAACTT GCTCT-TGACGCTGGCGCCGATGA-AG TTG CTATCTTTGGCGC-AGCTTCAGAGAGC TTTAGTCAGAAGAAT Spea_2802 3422068 - 3422973 + | pyruvate carboxyltransferase TERM 3870 3423462 - 3423477 + G 77 -9 -3.92542 | overlap 3423452 3423455 AATTCGTGCCGGCGG TGCTGG TATT CCAGCA TTCTTTACCGCTACA Spea_2803 3423121 - 3423855 + | 3-oxoacid CoA-transferase, A subunit Spea_2804 3423868 - 3424524 + | 3-oxoacid CoA-transferase, B subunit TERM 3871 3424589 - 3424572 - f 90 -11.3 -3.93963 | opp_overlap 3424572 ACTATGATCTATAAA CGCAGCT CAAG AGCTGCG TTTTTTTACTCAGTT TERM 3872 3424572 - 3424589 + F 100 -11.3 -5.54894 | opp_overlap 3424572 ACTATGATCTATAAA CGCAGCT CAAG AGCTGCG TTTTTTTACTCAGTT Spea_2805 3424616 - 3425653 + | aminoglycoside phosphotransferase TERM 3873 3425671 - 3425701 + T 70 -8.5 -3.26947 | GAGTTAAATTGCCCG GTATGAACTTG CACAACCGA CAAGTTCATAC TTAATATAGCGATTA Spea_2806 3426127 - 3425714 - | hypothetical protein TERM 3874 3426299 - 3426266 - R 74 -8.9 -3.53224 | gap 1, opp_overlap 3426266, overlap 3426267 3426285 3426286 CACTGTCCTTCTAAA TGGCCCCAAG-GCAAT AAT ATTGCGCCTGAGGCCC ACATCTATGCTTTAG TERM 3875 3426298 - 3426267 - R 83 -12.4 -2.71791 | gap 1, opp_overlap 3426266, overlap 3426266 3426285 3426286 ACTGTCCTTCTAAAT GGCCCCAAG-GCAAT AAT ATTGCGCCTGAGGCC CACATCTATGCTTTA Spea_2807 3429436 - 3426311 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 3876 3426419 - 3426404 - G 71 -6.8 -4.07133 | overlap 3426406 3426413 TACCGGCACAAATAA CACGGC AAAT ACCGTG CCGGTAAACATGCCA Spea_2808 3430606 - 3429470 - | RND family efflux transporter MFP subunit TERM 3877 3430419 - 3430432 + g 73 -9.5 -3.37796 | opp_overlap 3430418 TCAGCGCTACGTAAT GGGCG CACT CGCCC TTGTAACTCATCAAA Spea_2809 3430860 - 3431537 + | two component transcriptional regulator TERM 3878 3431816 - 3431804 - g 71 -3.4 -4.84761 | ACATTTTCAGAAAAA CAAC TACAG GTTG GCCAGCATTATTACG Spea_2810 3431534 - 3432811 + | histidine kinase TERM 3879 3432877 - 3432893 + G 77 -3.7 -5.10077 | AAGGCTTACGATGGC GAGATTT ATG GGATCTC TTTTTTCAGCTATTT Spea_2811 3432844 - 3433305 + | hypothetical protein TERM 3880 3433516 - 3433495 - T 100 -14.5 -5.86976 | opp_overlap 3433495 GCAGAAAACAAAAAA TCCGGGAAG TTCA CTTCCCGGA TTATATTGAAGCGCA TERM 3881 3433495 - 3433516 + T 100 -14.5 -3.65812 | opp_overlap 3433495 GCAGAAAACAAAAAA TCCGGGAAG TTCA CTTCCCGGA TTATATTGAAGCGCA Spea_2812 3434943 - 3433543 - | nitrite reductase (cytochrome; ammonia-forming) Spea_2813 3435135 - 3435572 + | hypothetical protein Spea_2814 3435988 - 3435641 - | endoribonuclease L-PSP Spea_2815 3436164 - 3436676 + | hypothetical protein TERM 3882 3436703 - 3436726 + T 100 -12.5 -4.95806 | opp_overlap 3436703 TTTTATAAATAAAAA GCCCGCAAA CTTTCA TTTGCGGGC TTTTTGTCGTGCTTT TERM 3883 3436726 - 3436703 - T 100 -13.2 -5.38054 | opp_overlap 3436703 TTTTATAAATAAAAA GCCCGCAAAC TTTC ATTTGCGGGC TTTTTGTCGTGCTTT Spea_2816 3437478 - 3436753 - | cytoplasmic chaperone TorD family protein TERM 3884 3437514 - 3437497 - R 77 -10.5 -3.28497 | opp_overlap 3437494 3437493 3437488 3437497 TGACCTTAAAGCTAA GCGGGCC ATTA AGCCCGC TGATGTATTATTTAA TERM 3885 3437497 - 3437514 + r 71 -9.8 -2.8341 | opp_overlap 3437497, overlap 3437494 3437493 3437488 TGACCTTAAAGCTAA GCGGGC CATTAA GCCCGC TGATGTATTATTTAA TERM 3886 3437570 - 3437548 - R 80 -10 -3.64703 | opp_overlap 3437547 3437551, overlap 3437551 CTTTTGTTATCCAAA CAACTGAAAT TAA ACTTCAGTTG GGTTTAGGATATCGC Spea_2817 3438222 - 3437557 - | dimethylsulfoxide reductase chain B Spea_2818 3440759 - 3438237 - | anaerobic dimethyl sulfoxide reductase subunit A Spea_2819 3442823 - 3440799 - | outer membrane protein TERM 3887 3441106 - 3441090 - G 79 -9.5 -3.77196 | TGATGAGTTAGCAAA TAGGTAG TCA CTACCTA AAATCAATCTGCCAT TERM 3888 3441887 - 3441903 + g 75 -9.5 -3.63068 | TATCAACCTGACCGT CCCAATT TTG AATTGGG TTTCCACTCATCTGG TERM 3889 3442594 - 3442576 - G 73 -10.2 -3.02511 | opp_overlap 3442588 TTGACGCCTGCAATA GCACCGTC TTC GCCGGTGC CAAACTGGTTGATGG Spea_2820 3443779 - 3442841 - | cytochrome C family protein TERM 3890 3444202 - 3444188 - H 79 -5 -5.11063 | ATTATCGAATAAAAA TCAAAC AAA GCTTGA ATCATGAATAGTGAG Spea_2821 3444514 - 3444933 + | isoprenylcysteine carboxyl methyltransferase family protein Spea_2822 3446542 - 3445085 - | hypothetical protein TERM 3891 3446636 - 3446664 + H 71 -7.5 -3.89822 | opp_overlap 3446636, overlap 3446626 ACTTACTGCAATTAA GTAGCAGTGTGAT TCT ATTTCATTGCTAC TTTGTGCAATACATC Spea_2823 3446895 - 3447182 + | hypothetical protein Spea_2824 3447229 - 3447912 + | hypothetical protein TERM 3892 3447948 - 3447916 - T 79 -4.9 -5.10208 | overlap 3447919 CAAGGTCAATAAAAA CAATCAACCCAAC ATGAGTG GTTGGGCTGACTC TAAACACACTTAGAA TERM 3893 3447945 - 3447919 - T 87 -8.8 -4.63592 | overlap 3447916 GGTCAATAAAAACAA TCAACCCAAC ATGAGTG GTTGGGCTGA CTCTAAACACACTTA Spea_2825 3449135 - 3448032 - | MoxR-like protein ATPase-like protein Spea_2826 3450406 - 3449144 - | hypothetical protein TERM 3894 3452006 - 3452039 + GH 72 -3.1 -4.99435 | gap 1, opp_overlap 3452007, overlap 3452008 CACTATGCTTGAGCA AGGCGGC-ATTACATC TGA GATGCAGTTGCCGCTA TTTTTAATTCTTAAA TERM 3895 3452008 - 3452037 + GH 75 -7.9 -4.11092 | gap 1, opp_overlap 3452007, overlap 3452006 CTATGCTTGAGCAAG GCGGC-ATTACATC TGA GATGCAGTTGCCGC TATTTTTAATTCTTA TERM 3896 3452340 - 3452325 - gH 72 -3.2 -4.98531 | CTTTTAAACCAAAAA GAAGAG CTAG CCCTCC GTCAACAAGCAATTC Spea_2827 3450504 - 3452894 + | BRCT domain-containing protein TERM 3897 3454536 - 3454569 + GF 72 -3.1 -4.99435 | gap 1, opp_overlap 3454537, overlap 3454538 CACTATGCTTGAGCA AGGCGGC-ATTACATC CGA GATGCAGTTGCCGCTA TTTTTAATTCTTAAA TERM 3898 3454538 - 3454567 + GF 75 -7.9 -4.11092 | gap 1, opp_overlap 3454537, overlap 3454536 CTATGCTTGAGCAAG GCGGC-ATTACATC CGA GATGCAGTTGCCGC TATTTTTAATTCTTA TERM 3899 3454870 - 3454855 - gf 74 -5.4 -4.65895 | CTGTTGAGTCAAAAA GAAGAG CTAG CTCTCC GACAACAAGCCATTG Spea_2828 3452857 - 3455424 + | hypothetical protein Spea_2829 3455550 - 3455864 + | hypothetical protein TERM 3900 3456578 - 3456563 - g 71 -7.6 -3.94877 | overlap 3456560 AGCGGTTAATAATAA CGGTAA GCCA TTACCG GTCAGCAGTTATAAC Spea_2830 3455910 - 3456776 + | hypothetical protein Spea_2831 3456806 - 3457774 + | hypothetical protein TERM 3901 3458201 - 3458171 - g 78 -5.5 -4.8048 | gap 1 TTCTGACACTAAAAA CCAAAGCAA-GCCT GTAC AAGCGCCGCTTTGG ATTGATACTGCCAAC TERM 3902 3458318 - 3458332 + G 74 -3.5 -4.93661 | overlap 3458319 CTACTTAAGTTTATT TGTCC ACCAA GGACG TTTTCTTATTCCTGT TERM 3903 3458520 - 3458510 - g 73 -4 -4.88918 | overlap 3458505 TGAGCCGAAACAAAA CAAA GGC TTTG CCGACTTAAAGCTAC Spea_2832 3457764 - 3458705 + | hypothetical protein Spea_2833 3459004 - 3459594 + | hypothetical protein Spea_2834 3459591 - 3459947 + | hypothetical protein TERM 3904 3460037 - 3460062 + T 74 -4.8 -4.81083 | opp_overlap 3460039, overlap 3460039 ACCCTTGTCTGGCAA TA-CGGGGACCA AATA TGG-CCCCGTTA TTTTTACTCGTTGGA TERM 3905 3460039 - 3460059 + T 88 -9 -4.50218 | gap 1, opp_overlap 3460039, overlap 3460037 CCTTGTCTGGCAATA CGGGGACCA AATA TGG-CCCCG TTATTTTTACTCGTT Spea_2835 3461265 - 3460066 - | TPR repeat-containing protein TERM 3906 3461905 - 3461936 + G 72 -8.9 -3.54146 | gap 1, opp_overlap 3461905, overlap 3461903 GGCCGCAGAGCAAAA TCATGTCGAT-GCA CTTTA TGCTATCGGCATGA TCTTTCATTCAACGA TERM 3907 3461936 - 3461905 - g 76 -7.4 -4.34402 | gap 1, opp_overlap 3461903 3461905 GGCCGCAGAGCAAAA TCATGTCGAT-GCAC TTT ATGCTATCGGCATGA TCTTTCATTCAACGA TERM 3908 3462195 - 3462180 - g 77 -3.3 -5.18371 | opp_overlap 3462180, overlap 3462175 3462184 TTGCAGAAAACAAAA CAAAC GCCTTT GTTTG GTATCAGAAGGCGGC TERM 3909 3462208 - 3462184 - g 74 -3.6 -5.06411 | gap 1, opp_overlap 3462180, overlap 3462180 3462175 AGAAAACAAAACAAA CGCCTT-TGTT TGGT ATCAGAAGGCG GCTAATGAGGGGTAT Spea_2836 3461462 - 3462604 + | Sel1 domain-containing protein Spea_2837 3462838 - 3463395 + | hypothetical protein TERM 3910 3463411 - 3463399 - T 71 -6.3 -4.30576 | TTTTCATCATGAAAA GCAAA TCA TTTGC CACCCATTATAAATC TERM 3911 3463599 - 3463571 - T 91 -10.5 -4.65916 | TTTATGCGAAGAAAA TCAGCTTATAGAG TGA CTCTATAAACTAA ATGAACGGGTTGCTT Spea_2838 3464182 - 3463622 - | hypothetical protein Spea_2839 3464599 - 3464186 - | hypothetical protein Spea_2841 3465975 - 3465073 - | putative hydrolase TERM 3912 3466129 - 3466152 + r 73 -6.8 -4.24534 | opp_overlap 3466129 AGGCCCGCAATATCA TTCAGGTTTG AAAT TAAACCTGGA TTTATCTATTAGTTC Spea_2842 3467645 - 3466161 - | hypothetical protein TERM 3913 3467791 - 3467773 - R 90 -8.8 -5.07941 | overlap 3467774 AAAATGATAGAAAAA TGGGGTAC TAA GTACCCCT AACGCCCAAGTGATG TERM 3914 3467790 - 3467774 - R 90 -12.3 -3.62324 | overlap 3467773 AAATGATAGAAAAAT GGGGTAC TAA GTACCCC TAACGCCCAAGTGAT Spea_2843 3470160 - 3467818 - | TonB-dependent receptor Spea_2844 3470230 - 3471213 + | LysR family transcriptional regulator TERM 3915 3471454 - 3471464 + T 73 -8.2 -3.84246 | TAAAGCCGTCCTTGG CCGC TCT GCGG TTTCATCCTTGAAAC Spea_2845 3472459 - 3471752 - | hypothetical protein Spea_2846 3473674 - 3472661 - | hypothetical protein TERM 3916 3473032 - 3473018 - G 85 -5.7 -5.41359 | AATGAAATTAAAAAA GGAGT TTTTG ACTCC ATATAACCTCTGATA TERM 3917 3473060 - 3473070 + g 74 -5.4 -4.67608 | ATATTCTGAATGGTA TAGC TCT GCTA TTTTGTCTTGAGCTG Spea_2847 3474643 - 3475680 + | transposase IS116/IS110/IS902 family protein TERM 3918 3476131 - 3476145 + T 70 -8.6 -3.4052 | ATCCCACGACGTTTA TCAAGC GCA GCTTGA TTGCTTAAGTTCAGG Spea_2848 3476770 - 3476204 - | LemA family protein Spea_2849 3478154 - 3476892 - | hypothetical protein Spea_2850 3479472 - 3478141 - | hypothetical protein TERM 3919 3478333 - 3478312 - G 81 -8.1 -4.37658 | gap 1, opp_overlap 3478310 3478312 AATTTCCTTATAAAA TTCATCTGGC TTT GCCAG-TGAA TGTTTACGTTTTTCA TERM 3920 3479816 - 3479778 - R 73 -9.8 -3.20769 | overlap 3479785 AAAGAAGTTGACCAA TAAAAAAGGCTAACACCA TAA CAGCGTTAACCTCTTTTA TTTCTCTGGACTCAG TERM 3921 3479809 - 3479785 - R 89 -5.7 -5.5112 | overlap 3479778 TTGACCAATAAAAAA GGCTAACACCA TAA CAGCGTTAACC TCTTTTATTTCTCTG Spea_2851 3480683 - 3480105 - | thymidine kinase TERM 3922 3481666 - 3481624 - g 70 -2 -4.9181 | gap 1, opp_overlap 3481658, overlap 3481626 3481627 3481629 ACAGAAGATCAAAAA CAG-CAGATCCGAGTGCTC AATGAA GAGCAATCGACTCTGACCA ATGAGTTTGCTCAGC TERM 3923 3481727 - 3481706 - g 82 -10.9 -3.52162 | overlap 3481704 GCCAGACAAAAGAGA TTGCCGTCG TCGT CGACAGCAA GGAGCTACTAACTGG Spea_2852 3481063 - 3483198 + | peptidyl-dipeptidase Dcp TERM 3924 3483239 - 3483256 + T 100 -11.3 -5.64274 | opp_overlap 3483238 3483237 3483255, overlap 3483226 ATGTCATGATAAATG GCTCCCT TTAA AGGGAGC TTTTTTTATGGCTGA TERM 3925 3483316 - 3483299 - T 100 -8.4 -5.626 | opp_overlap 3483299 3483298, overlap 3483255 CAGCCCACAAAAAAA CCGCTC GATAAG GAGCGG CTTTAGGAGAGTCGA Spea_2853 3485026 - 3483446 - | Na+/H+ antiporter NhaC TERM 3926 3485177 - 3485157 - R 93 -9.9 -5.1244 | opp_overlap 3485156 TCATTAATATAAAAA TTCTTATCT TCC AGATAAGAA ATACTATGGCAGTGC TERM 3927 3485410 - 3485371 - R 100 -14.5 -4.99035 | opp_overlap 3485376, overlap 3485373 TGACGGACATAAAAA CATAAGCGGCTTTAGAG ATGCTA CCCTAAAGCCGCTTATC GTGACACAGATCACG TERM 3928 3485408 - 3485373 - R 100 -17.1 -4.11744 | opp_overlap 3485376, overlap 3485371 ACGGACATAAAAACA TAAGCGGCTTTAGAG ATGCTA CCCTAAAGCCGCTTA TCGTGACACAGATCA TERM 3929 3485376 - 3485405 + r 86 -12.2 -3.40403 | opp_overlap 3485373 3485371 GACATAAAAACATAA GCGGCTTTAGAG ATGCTA CCCTAAAGCCGC TTATCGTGACACAGA Spea_2854 3486445 - 3485522 - | electron transfer flavoprotein alpha subunit TERM 3930 3486154 - 3486133 - G 76 -7.9 -4.27259 | opp_overlap 3486132 3486133 GAGACACATCCAAAA GTGCAGCCA CTCG CGGCAGCAC ATCTTTACCAAAACT Spea_2855 3487194 - 3486445 - | electron transfer flavoprotein alpha/beta-subunit TERM 3931 3487671 - 3487661 - g 79 -4 -5.11063 | overlap 3487655 ATCATTGAAGAAAAA TCTT CTC AAGA TGCTGCAGAACAAGA Spea_2856 3487541 - 3487933 + | histone family protein nucleoid-structuring protein H-NS TERM 3932 3487973 - 3487956 - f 70 -8.3 -3.34609 | opp_overlap 3487956, overlap 3487954 TCATCCAAACTAAGA GCCCTGC GATT GCGGGGC TTTTTCATTTTAGGT TERM 3933 3487956 - 3487973 + F 93 -10.5 -5.10154 | opp_overlap 3487956 3487954 TCATCCAAACTAAGA GCCCTGC GATT GCGGGGC TTTTTCATTTTAGGT TERM 3934 3488854 - 3488839 - g 72 -6.2 -4.32649 | overlap 3488835 ACGCCAAAAAGCAAA GTTTCA TCTT TGAAAC TAAAAACCTCAATAA TERM 3935 3489214 - 3489201 - g 75 -9.5 -3.61398 | GGTTTGTCTGAAGAA GCGGC CCTA GCCGC ATTAACCACCGACGC TERM 3936 3489822 - 3489794 - g 85 -6 -5.4251 | GGTACATATAAAAAA CGCCACTATCTG GACCT CAGATAAGAGCG GCGTACTCAGCAATA TERM 3937 3490374 - 3490357 - g 100 -11.3 -5.67063 | overlap 3490370 CCGATTATAAAAAAA TGCGCTC AAGC GAGCGCA GGCGCACGGTCGCGC TERM 3938 3490919 - 3490933 + G 75 -10 -3.53012 | CGACTCTACCTGGAT TAGCGG CCG CCGCTA TTTCAGCCGCGAACA Spea_2857 3488091 - 3491123 + | amidohydrolase Spea_2858 3491123 - 3492526 + | hypothetical protein TERM 3939 3492570 - 3492586 + F 100 -10.9 -5.45652 | opp_overlap 3492570 CTAACGGTAGGAAAA GTGCTCA TTA TGAGCAC TTTTTTATTGCAGCT TERM 3940 3492586 - 3492570 - f 90 -10.9 -4.28361 | opp_overlap 3492570 CTAACGGTAGGAAAA GTGCTCA TTA TGAGCAC TTTTTTATTGCAGCT Spea_2859 3492653 - 3493036 + | putative lipoprotein TERM 3941 3493139 - 3493123 - g 70 -2.2 -4.99043 | TCCTTATAAACAAAA GTTTGG TATCC CCAGAC AACCAGGTTTGGTAA Spea_2860 3493064 - 3493834 + | hypothetical protein Spea_2861 3493843 - 3494472 + | hexapaptide repeat-containing transferase TERM 3942 3494741 - 3494751 + F 85 -5.4 -5.24129 | TACGGCTTAGATTTT CCAA TAC TTGG TTTTTTATGGAGGGG Spea_2862 3494769 - 3495212 + | UspA domain-containing protein TERM 3943 3495327 - 3495316 - T 73 -2.2 -5.27476 | overlap 3495322 CTTAATAAAAGAAAA TCAC AAGG GCGA TAAACGCGCTGACGA Spea_2863 3496677 - 3495733 - | Nitrilase TERM 3944 3497143 - 3497126 - g 88 -7.7 -4.91473 | opp_overlap 3497126 CAACTCAAAAAGAAA CTCCTGC AAAC GCAGAAG TCGTTAGTCATCAGT TERM 3945 3497503 - 3497522 + G 74 -7.2 -4.371 | gap 1, opp_overlap 3497501 ATTCAAACCAAATTC CGT-GACGA AGT TCGTCCACG TTTTGGTGTAATGCG Spea_2864 3497086 - 3498798 + | prolyl-tRNA synthetase TERM 3946 3498870 - 3498832 - f 100 -17.1 -3.28924 | gap 1, opp_overlap 3498842, overlap 3498842 GACCGTTCGCTAGAA CAATAAAAAACGCCGATG ACAT CATCGGCGTTTTTT-TTG TAAATACATCCGCTA TERM 3947 3498861 - 3498842 - f 100 -13.6 -5.68489 | opp_overlap 3498842, overlap 3498832 TAGAACAATAAAAAA CGCCGATG ACAT CATCGGCG TTTTTTTTGTAAATA TERM 3948 3498842 - 3498861 + F 100 -13.6 -5.96219 | opp_overlap 3498842 3498832 TAGAACAATAAAAAA CGCCGATG ACAT CATCGGCG TTTTTTTTGTAAATA TERM 3949 3499714 - 3499696 - g 79 -3.1 -5.31275 | TGGGAGCAGAAAAAA TCATGGT GATTA ACCTTGA AAGCCCCCATAAGAT Spea_2865 3499017 - 3500141 + | patatin Spea_2866 3500862 - 3500134 - | hypothetical protein Spea_2867 3502889 - 3500940 - | sodium/hydrogen exchanger TERM 3950 3502180 - 3502192 + g 76 -9.1 -3.7282 | opp_overlap 3502180 AATGCCATAGATAAA CCCAG CCA CTGGG TTATTGCTCCAGTCA TERM 3951 3502192 - 3502180 - G 79 -9.1 -4.13648 | opp_overlap 3502180 AATGCCATAGATAAA CCCAG CCA CTGGG TTATTGCTCCAGTCA TERM 3952 3503197 - 3503184 - H 73 -2.4 -5.252 | CACTGGGAGAAAAAA CCAA TGGAAC TTGG CTTAGCAACAGAGTC Spea_2868 3503187 - 3504068 + | diguanylate cyclase Spea_2869 3505524 - 3504115 - | tRNA(Ile)-lysidine synthetase TERM 3953 3504476 - 3504435 - G 82 -7.5 -4.63218 | CGGTTGGCAATAAAA CGTCACCACTCAATAACAC TTCA ATATTATTAAGTGCTAACG CTGGATAGGTTTTCT Spea_2870 3509099 - 3505566 - | DNA polymerase III subunit alpha TERM 3954 3508387 - 3508375 - G 73 -7.7 -4.19238 | TCGGCAAGGGTAAAA CCATC GTA GATGG CCACTCGAATTTCGT Spea_2871 3509820 - 3509209 - | ribonuclease H TERM 3955 3509742 - 3509732 - G 74 -8.2 -3.90291 | opp_overlap 3509732 3509729 ACGTTGCCAATCAAA GGCC CAC GGCC TACTTCATCGACACC Spea_2872 3510971 - 3509820 - | lipid-A-disaccharide synthase TERM 3956 3510873 - 3510890 + g 71 -7.7 -3.91084 | AAATTTAGCATCTGG GTACTGC TTTT GCAGTGC TTTAATTAAGCCTGC TERM 3957 3511028 - 3511007 - R 84 -8 -4.75288 | TGAGATGAAAACAAA GAACCCGC TTTTAC ACGGGTTC AGGTCTTGGACTAGC Spea_2873 3511809 - 3511039 - | UDP-N-acetylglucosamine acyltransferase Spea_2874 3512303 - 3511806 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Spea_2875 3513320 - 3512304 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Spea_2876 3513822 - 3513325 - | outer membrane chaperone Skp (OmpH) TERM 3958 3513848 - 3513864 + r 90 -5.1 -5.54192 | overlap 3513862 ACATACTCCTTTATC TCAGCAA AAC TTGCCGA TTTTTTTAAATTGAT Spea_2877 3516364 - 3513881 - | surface antigen (D15) Spea_2878 3517766 - 3516396 - | putative membrane-associated zinc metalloprotease TERM 3959 3517466 - 3517443 - G 79 -9.6 -3.68023 | AATGGCGAAAAGGAA GTTAGCGATG GGGC CAGCGCTAAC GATTGCGATTCGCTG TERM 3960 3517707 - 3517690 - G 70 -9.9 -3.10597 | overlap 3517689 CGTGCTACCCAAAAG TGCCCAT ATTC ATGGGCA GCAATTAAAATCCCT TERM 3961 3517749 - 3517738 - G 76 -4.4 -4.96523 | AAAGCAACAATAAAA GAAC CTAA GTTC CATAAAAAATCGATC Spea_2879 3518971 - 3517781 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 3962 3517849 - 3517895 + g 78 -4.7 -4.94262 | gap 1, opp_overlap 3517856, overlap 3517856 AAGCCAAGATATCAT C-AATACAGTTTAATGGATGCG TCGC CGTATTCATTAAGCTTTGTTCG TTTATTTTTGCTATA TERM 3963 3517856 - 3517887 + g 90 -9.6 -4.46742 | opp_overlap 3517856, overlap 3517849 GATATCATCAATACA GTTTAATGGATGCG TCGC CGTATTCATTAAGC TTTGTTCGTTTATTT Spea_2880 3519833 - 3518976 - | phosphatidate cytidylyltransferase TERM 3964 3519341 - 3519319 - G 83 -9.8 -4.07568 | overlap 3519321 TTTTTCCCCGCAAAA TAGGCGCCAG AGT CTGTCGCCCA AACGACCAACATCAC TERM 3965 3519339 - 3519321 - G 79 -10.2 -3.63744 | overlap 3519319 TTTCCCCGCAAAATA GGCGCCAG AGT CTGTCGCC CAAACGACCAACATC Spea_2881 3520654 - 3519854 - | undecaprenyl diphosphate synthase TERM 3966 3520717 - 3520674 - R 73 -5.4 -4.63542 | gap 1, opp_overlap 3520680 3520682, overlap 3520682 TACAACCCTTAAAAA TAGACAA-ACGCCGTGTAG TATACCT CTACACGGCGTCTTAACTC TAGGGCATGTTGACT TERM 3967 3520680 - 3520710 + r 82 -11.2 -3.1247 | opp_overlap 3520674 3520682, overlap 3520682 CCTTAAAAATAGACA AACGCCGTGTAG TATACCT CTACACGGCGTC TTAACTCTAGGGCAT TERM 3968 3520682 - 3520708 + r 93 -13.8 -3.12327 | opp_overlap 3520682 3520674, overlap 3520680 TTAAAAATAGACAAA CGCCGTGTAG TATACCT CTACACGGCG TCTTAACTCTAGGGC TERM 3969 3520708 - 3520682 - R 100 -13.8 -4.38876 | opp_overlap 3520680 3520682, overlap 3520674 TTAAAAATAGACAAA CGCCGTGTAG TATACCT CTACACGGCG TCTTAACTCTAGGGC Spea_2882 3521463 - 3520906 - | ribosome recycling factor Spea_2883 3522224 - 3521496 - | uridylate kinase TERM 3970 3521936 - 3521917 - G 71 -7.9 -3.84266 | overlap 3521931 ATAGCTGACATTAAA CGTGCAT TTACAT ATGCACG GTGCAACGAATCACG TERM 3971 3522318 - 3522349 + r 80 -10.2 -3.76224 | opp_overlap 3522320 3522323, overlap 3522320 3522323 TATTCGAGTATATAC GATAAGACCGCAGC AATT GCTACGGTCTTATG TTTGCTAAATAAGGA TERM 3972 3522347 - 3522320 - R 95 -15 -2.71268 | opp_overlap 3522318 3522320 3522323, overlap 3522323 TTCGAGTATATACGA TAAGACCGCAGC AATT GCTACGGTCTTA TGTTTGCTAAATAAG TERM 3973 3522320 - 3522347 + r 90 -12.8 -3.46647 | opp_overlap 3522320 3522323, overlap 3522318 3522323 TTCGAGTATATACGA TAAGACCGCAGC AATT GCTACGGTCTTA TGTTTGCTAAATAAG TERM 3974 3522344 - 3522323 - R 90 -12.3 -3.50492 | opp_overlap 3522320 3522318 3522323, overlap 3522320 GAGTATATACGATAA GACCGCAGC AATT GCTACGGTC TTATGTTTGCTAAAT TERM 3975 3522323 - 3522344 + r 84 -10.1 -3.86653 | opp_overlap 3522323 3522320, overlap 3522320 3522318 GAGTATATACGATAA GACCGCAGC AATT GCTACGGTC TTATGTTTGCTAAAT Spea_2884 3523278 - 3522367 - | elongation factor Ts TERM 3976 3523298 - 3523265 - G 72 -6 -4.46254 | gap 1, opp_overlap 3523267 TCAATAGATAAGAAA CAGGGGC-CAATCAT ATTTA ATGAAAGAGCCCCTG TTCACCAATCATGTA Spea_2885 3524081 - 3523353 - | 30S ribosomal protein S2 Spea_2886 3524389 - 3525189 + | methionine aminopeptidase TERM 3977 3525241 - 3525224 - f 90 -11.3 -3.92522 | opp_overlap 3525224 GGCTAAGTTTAGAAA GGCGTGA TGAT TCACGCC TTTTTTGTATCTATA TERM 3978 3525224 - 3525241 + F 100 -11.3 -5.4492 | opp_overlap 3525224 GGCTAAGTTTAGAAA GGCGTGA TGAT TCACGCC TTTTTTGTATCTATA TERM 3979 3525955 - 3525935 - g 71 -7.5 -4.00103 | overlap 3525928 3525952 AAAAAAATGAGCAAA TGGCCCGAC ATA ACCGAGCCA ATGCATTTGACTTAG TERM 3980 3527876 - 3527861 - g 82 -7.6 -4.57073 | TACTCGCGGCAAAAA TCACCA CCAT TGGTGA AAGAGCTGAAGATTT Spea_2887 3525421 - 3527976 + | PII uridylyl-transferase TERM 3981 3527956 - 3527969 + F 71 -6.7 -4.04319 | opp_overlap 3527948, overlap 3527952 AACACATTACGTGAA GCACT TATG AGTGC TTTATAGATTTATCA Spea_2888 3528009 - 3528833 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3982 3528862 - 3528890 + F 100 -14.7 -4.08958 | opp_overlap 3528868, overlap 3528868 ACCGCTAAGTTGACT CAAAAATCCCGCC TTA GGCGGGATTTTTC TTATTCTTTCACAAT TERM 3983 3528884 - 3528868 - f 100 -13.7 -4.67011 | opp_overlap 3528862 3528868 AAGTTGACTCAAAAA TCCCGCC TTA GGCGGGA TTTTTCTTATTCTTT TERM 3984 3528868 - 3528884 + F 100 -13.7 -5.40014 | opp_overlap 3528868, overlap 3528862 AAGTTGACTCAAAAA TCCCGCC TTA GGCGGGA TTTTTCTTATTCTTT Spea_2889 3529044 - 3529388 + | hypothetical protein TERM 3985 3529412 - 3529435 + T 82 -8.2 -4.53705 | opp_overlap 3529417, overlap 3529417 TGGCATGTAAAGCAG TAAAAGAGGC TGAC GCCTCTTTTC TTTTGTCTAAAACTT TERM 3986 3529430 - 3529417 - T 80 -8.1 -4.39386 | opp_overlap 3529417 3529412 TGTAAAGCAGTAAAA GAGGC TGAC GCCTC TTTTCTTTTGTCTAA TERM 3987 3529417 - 3529430 + T 91 -8.1 -5.23292 | opp_overlap 3529417, overlap 3529412 TGTAAAGCAGTAAAA GAGGC TGAC GCCTC TTTTCTTTTGTCTAA Spea_2890 3529978 - 3529514 - | flavodoxin Spea_2891 3531184 - 3530330 - | pseudouridine synthase TERM 3988 3531054 - 3531012 - G 83 -10.7 -3.65812 | gap 1, opp_overlap 3531039, overlap 3531013 CGTCTGGCAAGATAA CTGCGGTGCACCAACAAGCC TGCA GGCTTGTGGAT-CACCACAA TATCATCATCTTCAA TERM 3989 3531053 - 3531013 - G 77 -12 -2.79273 | gap 1, opp_overlap 3531039, overlap 3531012 GTCTGGCAAGATAAC TGCGGTGCACCAACAAGCC TGCA GGCTTGTGGAT-CACCACA ATATCATCATCTTCA Spea_2892 3531528 - 3531208 - | hypothetical protein Spea_2893 3531650 - 3532663 + | hypothetical protein Spea_2894 3532660 - 3533055 + | hypothetical protein TERM 3990 3533117 - 3533083 - T 100 -15 -3.34344 | opp_overlap 3533083 3533088, overlap 3533088 CCAGCCCTGAATGAA GTAAAGGCACGGCCCC AGA GGAGACGTGCCTTTTC TATTTTTGTGTAAGC TERM 3991 3533083 - 3533117 + T 93 -12.8 -4.11141 | opp_overlap 3533083 3533088, overlap 3533088 CCAGCCCTGAATGAA GTAAAGGCACGGCCCC AGA GGAGACGTGCCTTTTC TATTTTTGTGTAAGC TERM 3992 3533088 - 3533112 + T 95 -11.3 -5.02287 | opp_overlap 3533088 3533083, overlap 3533083 CCTGAATGAAGTAAA GGCACGGCCCC AGA GGAGACGTGCC TTTTCTATTTTTGTG TERM 3993 3533112 - 3533088 - T 100 -13.5 -4.00348 | opp_overlap 3533083 3533088, overlap 3533083 CCTGAATGAAGTAAA GGCACGGCCCC AGA GGAGACGTGCC TTTTCTATTTTTGTG TERM 3994 3533700 - 3533679 - T 100 -15.9 -4.87389 | opp_overlap 3533674 3533673 3533671 CATTGGAAAAAGAAA GGGCGTACC ATTC GGTACGCCC TAGCACTACTTTATT TERM 3995 3533919 - 3533909 - T 85 -5.4 -5.26875 | TGTTCAACTAAAAAA GCTT GAT AAGC ATAAGTTTAGGCAAA Spea_2895 3534515 - 3534213 - | hypothetical protein TERM 3996 3534498 - 3534486 - G 71 -3.4 -4.73912 | ATAAAAAGGATAAAA CTCA GCAAA TGAG GAGTAAGGTTTATTC Spea_2896 3535146 - 3534508 - | GCN5-related N-acetyltransferase TERM 3997 3534757 - 3534769 + g 79 -7.7 -4.39407 | CAAAATACCGCACTG CTTGC TGG GCAAG TTTTCGATTATTTGG TERM 3998 3534981 - 3534993 + g 77 -3.3 -5.19251 | TCAATTCTTCTCTAA TAGCG CCA CGCAA TTTTTGTTCATATTG Spea_2897 3535332 - 3535562 + | hypothetical protein Spea_2898 3535940 - 3535569 - | hypothetical protein Spea_2899 3536100 - 3536447 + | hypothetical protein Spea_2900 3536455 - 3537228 + | hypothetical protein TERM 3999 3537282 - 3537261 - T 90 -8.7 -5.05301 | opp_overlap 3537261 AAACAATTATAAAAA TGGCGCTTA TATT TCAGCGCCA TTTTTGTTTAACCCT TERM 4000 3537261 - 3537282 + T 93 -8.7 -5.27938 | opp_overlap 3537261 AAACAATTATAAAAA TGGCGCTTA TATT TCAGCGCCA TTTTTGTTTAACCCT Spea_2901 3537994 - 3537353 - | SecY interacting protein Syd TERM 4001 3537741 - 3537731 - G 70 -2.4 -5.08824 | CTTGGAGTCAAAAAA CAGC GGC GCAG AAAAATGGCGTCCAT Spea_2902 3538038 - 3538910 + | 7-cyano-7-deazaguanine reductase TERM 4002 3538927 - 3538953 + T 100 -13.8 -5.5074 | opp_overlap 3538927 CGAACTCCAAGCAAA GACCTGTAACGC CCT GCATTACAGGTC TTTTTTATTAAGTTC TERM 4003 3538953 - 3538927 - T 100 -16 -3.93369 | opp_overlap 3538927 CGAACTCCAAGCAAA GACCTGTAACGC CCT GCATTACAGGTC TTTTTTATTAAGTTC Spea_2903 3539896 - 3538979 - | LysR family transcriptional regulator TERM 4004 3541709 - 3541698 - g 74 -5.8 -4.72272 | opp_overlap 3541697 3541701 CTGGCGCACCAAAAA CTGC ATCT GCAG ATGTGATTAGCGAGA Spea_2904 3540098 - 3542083 + | beta-lactamase domain-containing protein TERM 4005 3542138 - 3542108 - T 100 -17.7 -3.57246 | opp_overlap 3542113, overlap 3542113 AGTATCAATTAAACA CAAAACGGGGCGC ATTTA GCGCCCCGTTTTA ATAAACCTACCGATA TERM 4006 3542113 - 3542133 + T 100 -15.4 -4.26076 | opp_overlap 3542108 3542113 CAATTAAACACAAAA CGGGGCGC ATTTA GCGCCCCG TTTTAATAAACCTAC TERM 4007 3542133 - 3542113 - T 100 -15.4 -4.84539 | opp_overlap 3542113, overlap 3542108 CAATTAAACACAAAA CGGGGCGC ATTTA GCGCCCCG TTTTAATAAACCTAC Spea_2905 3543111 - 3542200 - | 4'-phosphopantetheinyl transferase TERM 4008 3544427 - 3544401 - g 74 -7.2 -4.27512 | overlap 3544398 3544404 3544407 GCTTATAACAAACAA CAAGACGCCTGA CAC TCAGGCACCCAG CGGAGACTCATAATG TERM 4009 3544424 - 3544404 - g 87 -9.7 -4.24183 | overlap 3544401 3544398 3544407 TATAACAAACAACAA GACGCCTGA CAC TCAGGCACC CAGCGGAGACTCATA Spea_2906 3543574 - 3544440 + | transcriptional regulator, putative TERM 4010 3544636 - 3544621 - g 82 -5.4 -5.12617 | TAATCAGCGAAAAAA TCGATG CCAT CACCGA ATTGCCATCGACTCA TERM 4011 3544923 - 3544909 - g 72 -2.8 -5.00616 | overlap 3544910 GTGGCGGCCAAAAAA TTAGCC ACA GCCTAA CGGCGCGTCTACAGT TERM 4012 3547208 - 3547194 - g 71 -7.2 -4.03413 | ACTCTGGCAGATAAA GCAAAT GAA ATTTGC ACTATCTCAATCAAC TERM 4013 3549850 - 3549797 - g 86 -13.3 -3.40907 | gap 1, opp_overlap 3549805 3549819 3549838, overlap 3549791 3549793 3549801 3549806 CTATATGAACAGCAA GCTATCAACTGCTGGCGCAACAGTTG CTT CAACTGTTGCAGCTGCAACCGAT-GC AGTTAAATCAGTAGC TERM 4014 3549847 - 3549801 - g 83 -13.8 -2.6078 | opp_overlap 3549805 3549819 3549838, overlap 3549791 3549793 3549797 3549806 ATGAACAGCAAGCTA TCAACTGCTGGCGCAACAGTTG CTT CAACTGTTGCAGCTGCAACCGA TGCAGTTAAATCAGT TERM 4015 3549842 - 3549806 - g 86 -14.5 -2.53409 | opp_overlap 3549805 3549819 3549838, overlap 3549791 3549793 3549801 3549797 CAGCAAGCTATCAAC TGCTGGCGCAACAGTTG CTT CAACTGTTGCAGCTGCA ACCGATGCAGTTAAA TERM 4016 3551664 - 3551624 - g 100 -15.6 -3.62176 | overlap 3551649 3551651 3551654 AACAAGAGCCTTAAA CCCTAACGCGATGGTCTT TATCC AAGACCACCGCATTAGCG GTAACCCTGTGTTGC Spea_2907 3544440 - 3552491 + | polyketide-type polyunsaturated fatty acid synthase, PfaA TERM 4017 3552546 - 3552587 + G 77 -11 -3.18912 | opp_overlap 3552549 3552553, overlap 3552549 3552553 GCGTCAGTGATCAAG TTATCAAGAGTGAGATGC CTCTGC GCATCGCACTCTTGATGC TTCCTGCATCACTAG TERM 4018 3552549 - 3552584 + G 87 -14.9 -2.79098 | opp_overlap 3552549 3552553, overlap 3552546 3552553 TCAGTGATCAAGTTA TCAAGAGTGAGATGC CTCTGC GCATCGCACTCTTGA TGCTTCCTGCATCAC TERM 4019 3552584 - 3552549 - g 86 -14.9 -2.57244 | opp_overlap 3552549 3552546 3552553, overlap 3552553 TCAGTGATCAAGTTA TCAAGAGTGAGATGC CTCTGC GCATCGCACTCTTGA TGCTTCCTGCATCAC TERM 4020 3552553 - 3552580 + G 71 -9.9 -3.29096 | opp_overlap 3552553 3552549, overlap 3552549 3552546 TGATCAAGTTATCAA GAGTGAGATGC CTCTGC GCATCGCACTC TTGATGCTTCCTGCA TERM 4021 3552580 - 3552553 - g 71 -9.9 -3.22884 | opp_overlap 3552549 3552546 3552553, overlap 3552549 TGATCAAGTTATCAA GAGTGAGATGC CTCTGC GCATCGCACTC TTGATGCTTCCTGCA TERM 4022 3552824 - 3552795 - g 83 -10.2 -3.66883 | gap 1, opp_overlap 3552801 GTAAGATAGTGCAAA TC-TCAACAGCGA CAAAC TCGCTGTTGATGA TGCATGCACTAAAAG TERM 4023 3553403 - 3553388 - g 77 -9 -3.98312 | CAGATAAAACTCAAA GCTCTG ACAA CAGAGC CAACGCCAAACGGCC TERM 4024 3553581 - 3553571 - g 82 -6.8 -4.74103 | overlap 3553578 GTGCTAAGTGAAAAA GACG AAT CGTC ACAATATAAGACGCC Spea_2908 3552491 - 3554824 + | PfaB family protein TERM 4025 3554957 - 3554947 - g 74 -8.2 -3.9009 | AACTTACTCGATAAA CGCG ACT CGCG CACAACACTGACCAA TERM 4026 3557562 - 3557580 + G 72 -10.4 -2.82635 | overlap 3557561 TGCGCTGTCATCTCG CTTAAGCT GTG AGCTTAAG TCTGATGCTAAGCAT TERM 4027 3557582 - 3557598 + G 77 -10.9 -3.14344 | GCTGTGAGCTTAAGT CTGATGC TAA GCATCAG TTACTCAAACAGGTA Spea_2909 3554824 - 3560664 + | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ TERM 4028 3560680 - 3560658 - f 93 -13.6 -3.09175 | opp_overlap 3560654 3560658 AATTTGCATCGAAGA GGCTTAAAAC GAA GTTTTAAGCC TAAGTTAATGACTAA TERM 4029 3560658 - 3560680 + F 91 -13.6 -2.57244 | opp_overlap 3560658, overlap 3560654 AATTTGCATCGAAGA GGCTTAAAAC GAA GTTTTAAGCC TAAGTTAATGACTAA TERM 4030 3560683 - 3560719 + F 70 -9.7 -2.72344 | opp_overlap 3560689 3560718, overlap 3560654 3560692 GAAGTTTTAAGCCTA AGTTAATGACTAAAG AAAAACA CTTTAGTCATTAACC TCCTTCGAAGTACAA Spea_2910 3560820 - 3562448 + | PfaD family protein TERM 4031 3562547 - 3562526 - f 95 -11.7 -4.33808 | opp_overlap 3562526 CAAACCAACCTAAAA GCCACTAAT CTCC ATTAGTGGC TTTTTTATTTTGACA TERM 4032 3562526 - 3562547 + F 100 -11.7 -5.79595 | opp_overlap 3562526 CAAACCAACCTAAAA GCCACTAAT CTCC ATTAGTGGC TTTTTTATTTTGACA TERM 4033 3562778 - 3562752 - f 95 -13 -3.57561 | GCTCAAGGCGTTAAA CTGCCAGCACAG CTA CTGCGCTGGAAG CCAACTCAAAGAATG TERM 4034 3562961 - 3562977 + F 77 -9.5 -3.54129 | opp_overlap 3562961 3562974 3562976 AGTGGGCTAAGGGAA GCTACTT AGA AAGTAGC TTTCAGAAAACTATC TERM 4035 3562977 - 3562961 - f 73 -9.5 -3.17194 | opp_overlap 3562961, overlap 3562974 3562976 AGTGGGCTAAGGGAA GCTACTT AGA AAGTAGC TTTCAGAAAACTATC TERM 4036 3563021 - 3562992 - f 70 -9.5 -2.50077 | opp_overlap 3562997, overlap 3562997 CTTTCAGAAAACTAT CAAAACCACTAAT TTTT ATTAGTGGTTTTT TATTGATACGTTTGT TERM 4037 3562997 - 3563016 + F 100 -9.4 -5.5112 | opp_overlap 3562992 3562997 AGAAAACTATCAAAA CCACTAAT TTTT ATTAGTGG TTTTTTATTGATACG TERM 4038 3563016 - 3562997 - f 90 -9.4 -4.43571 | opp_overlap 3562997, overlap 3562992 AGAAAACTATCAAAA CCACTAAT TTTT ATTAGTGG TTTTTTATTGATACG TERM 4039 3564304 - 3564290 - g 73 -2 -5.18297 | overlap 3564292 CAAGAACAAACAAAA CAGCTC AAC GAGCAA GTTTACATAGATAAG TERM 4040 3564302 - 3564292 - g 71 -6.8 -4.18024 | overlap 3564290 AGAACAAACAAAACA GCTC AAC GAGC AAGTTTACATAGATA TERM 4041 3564806 - 3564796 - g 74 -8.2 -3.98282 | CTTATATCAAGCAAA GGCC TGT GGCC GCAATCAATACAAGA Spea_2912 3563264 - 3564886 + | diguanylate cyclase Spea_2913 3565008 - 3565556 + | hypothetical protein TERM 4042 3565601 - 3565563 - T 73 -10.5 -2.78216 | gap 1, opp_overlap 3565575, overlap 3565560 CAGCCTTAGCAAGCA CGAGATAAAGCCCTCCTT AGAC AAAG-GCGCTTTATCTCG AACATATCAGCTAAA Spea_2914 3567932 - 3565620 - | penicillin amidase TERM 4043 3565773 - 3565735 - G 71 -3.7 -4.87665 | opp_overlap 3565755, overlap 3565736 3565737 CCGGAGCGATAAAAA GCGGATAGCGGATGCCC TGACT GGCCACCCGGTATCGTC ATTATGGCATTGACT TERM 4044 3566167 - 3566143 - G 74 -11.5 -2.90763 | opp_overlap 3566134 3566143 TTTATAGCTGAGAGA CTGAGCTCACT TTT AGCAAGCTCAG TTTCAATTGGCGCAA TERM 4045 3566396 - 3566383 - G 72 -3.1 -4.91712 | TGTAACTGATAAAAA TCCTC GACC GAGAA ACGGTCCGACTCAAA Spea_2915 3568168 - 3568419 + | hypothetical protein TERM 4046 3568415 - 3568446 + F 100 -9.5 -5.40464 | opp_overlap 3568416, overlap 3568416 GTAAGGTCACAATGA AGTAGCCAGCCTT GGAATG AAGGCTGGTTACA TTTTTCTTTGTGCTG TERM 4047 3568445 - 3568416 - f 82 -10.8 -3.45832 | opp_overlap 3568415 3568416 TAAGGTCACAATGAA GTAGCCAGCCTT GGAATG AAGGCTGGTTAC ATTTTTCTTTGTGCT TERM 4048 3568416 - 3568445 + F 100 -13 -3.82652 | opp_overlap 3568416, overlap 3568415 TAAGGTCACAATGAA GTAGCCAGCCTT GGAATG AAGGCTGGTTAC ATTTTTCTTTGTGCT TERM 4049 3568516 - 3568500 - f 75 -9.5 -3.28637 | GACTAACATCATCAA GTTAGAC TTC GTCTAAC AATTAACGTCGTGGC TERM 4050 3568527 - 3568541 + F 76 -7 -4.34263 | overlap 3568529 CTAACAATTAACGTC GTGGCG CTT CGCCCC TTTCTGTTGTTAAGA Spea_2916 3568994 - 3569236 + | hypothetical protein Spea_2917 3569294 - 3570613 + | putative deoxyguanosinetriphosphate triphosphohydrolase TERM 4051 3570711 - 3570684 - f 79 -10 -3.54408 | opp_overlap 3570684, overlap 3570680 GCTTATCTAAATTAA CCTAGTTAGACT AAAT ATTCTAACTAGG TTCTGTCCAGTTCTG TERM 4052 3570684 - 3570711 + F 79 -10 -3.52906 | opp_overlap 3570684 3570680 GCTTATCTAAATTAA CCTAGTTAGACT AAAT ATTCTAACTAGG TTCTGTCCAGTTCTG TERM 4053 3570982 - 3570965 - g 81 -4.9 -5.24799 | TTACAAAGATAAAAA TGGAAAA AATC TCTTCCA CCTAGTCTGCTCTTG Spea_2918 3570870 - 3571049 + | hypothetical protein Spea_2919 3571387 - 3571046 - | integrase, catalytic region Spea_2920 3571949 - 3572926 + | hypothetical protein TERM 4054 3572973 - 3572999 + F 83 -8.9 -4.07562 | gap 1 CCTAATGCCAATCGT CGTTTTCAGAGC TTAA GCTCT-AAAACG TTTCTGTCCACTTTC TERM 4055 3574112 - 3574080 - g 100 -16.6 -3.60419 | opp_overlap 3574074 3574074 ACCTTTAAATTACAA CCTGGTTGATAAAA GAGAA TTTTATCAACCAGG TATAGAAGTTTCTCG Spea_2921 3573607 - 3574956 + | radical SAM domain-containing protein TERM 4056 3574946 - 3574976 + T 74 -9 -3.55205 | opp_overlap 3574953, overlap 3574944 3574950 GTTATTCATTTGATG TGAAGTACTGAGGG GAT CCCTCTGTACTTAG TGTTTGCTGTATTCC TERM 4057 3574950 - 3574972 + T 89 -12 -3.4934 | opp_overlap 3574953, overlap 3574946 3574944 TTCATTTGATGTGAA GTACTGAGGG GAT CCCTCTGTAC TTAGTGTTTGCTGTA TERM 4058 3575220 - 3575210 - T 70 -8.2 -3.76224 | GTTTCAGGGACGAAA CCGC AGA GCGG CCAAGGACGGCTTTA TERM 4059 3575266 - 3575283 + T 80 -6.3 -4.75472 | overlap 3575274 GTAACGACATCTGAG GTTACTG CGAA CAGTAGC TTTTCTTCGTGTAGC Spea_2922 3576732 - 3575755 - | hypothetical protein TERM 4060 3577361 - 3577376 + G 82 -2.6 -5.50499 | TGATGCTGCTTACTC CTTTGA TGAC TTAAAG TTTTTTTACATATCA Spea_2923 3577269 - 3577559 + | hypothetical protein Spea_2924 3577668 - 3578171 + | hypothetical protein Spea_2925 3578230 - 3578667 + | hypothetical protein TERM 4061 3580842 - 3580821 - g 70 -2.2 -4.94222 | gap 1, overlap 3580822 3580823 3580835 AACAAGTGATAAAAA GCCTGCGAG AGACA CTCGCCG-C ACATCAGCGCACGAG Spea_2926 3579604 - 3581010 + | DEAD/DEAH box helicase domain-containing protein Spea_2927 3581259 - 3582476 + | hypothetical protein Spea_2928 3583878 - 3582553 - | amidohydrolase TERM 4062 3583606 - 3583618 + g 72 -4.8 -4.56775 | GCGGATCATCACCGT TGGC CCCTC GCCA TTTTTAAGGACACCT TERM 4063 3584239 - 3584227 - H 82 -6.3 -5.00616 | opp_overlap 3584226 3584227 TCGCGCGTCAAAAAA GAGAA TAA TTCTC ATTTGGTTAATCAGT Spea_2929 3584266 - 3586533 + | TonB-dependent heme/hemoglobin receptor family protein TERM 4064 3586597 - 3586551 - T 100 -22.1 -2.79183 | gap 1, opp_overlap 3586567, overlap 3586553 3586560 3586567 CTTAGCTTGATGATA TAGCACGAATAAAAAATGCAGC CTAG GCTGCATTTTTTATTCG-GCTA AAATCACGCTTAATC TERM 4065 3586595 - 3586553 - T 100 -20.3 -2.94416 | gap 1, opp_overlap 3586567, overlap 3586551 3586560 3586567 TAGCTTGATGATATA GCACGAATAAAAAATGCAGC CTAG GCTGCATTTTTTATTCG-GC TAAAATCACGCTTAA TERM 4066 3586589 - 3586560 - T 100 -15.3 -3.26813 | opp_overlap 3586567, overlap 3586553 3586551 3586567 ATGATATAGCACGAA TAAAAAATGCAGC CTAG GCTGCATTTTTTA TTCGGCTAAAATCAC TERM 4067 3586567 - 3586582 + T 95 -9 -5.46657 | opp_overlap 3586560 3586553 3586551 3586567 AGCACGAATAAAAAA TGCAGC CTAG GCTGCA TTTTTTATTCGGCTA TERM 4068 3586582 - 3586567 - T 95 -9 -5.52023 | opp_overlap 3586567, overlap 3586560 3586553 3586551 AGCACGAATAAAAAA TGCAGC CTAG GCTGCA TTTTTTATTCGGCTA Spea_2930 3589050 - 3586618 - | TonB-dependent receptor plug TERM 4069 3587338 - 3587326 - G 78 -5.5 -4.90266 | GTGATTAACGAAAAA CGACA AGT CGTCG GTTGGCATGTAAGTC Spea_2931 3590465 - 3589524 - | hypothetical protein TERM 4070 3590590 - 3590576 - R 75 -10 -2.95942 | CTGAGATTTAAAGCA TCAGGC TAC GCCTGA CTAAAGTCGTGGCGC TERM 4071 3590602 - 3590650 + r 75 -9.6 -3.33261 | gap 1, opp_overlap 3590629 3590639, overlap 3590599 CTGACTAAAGTCGTG GCGCTTCGCCCCTT-TCTCGAGT CAAG AGTCGAGCCAAGGGGGAAAGCGC TTGTCCCCCTTAGCG TERM 4072 3590832 - 3590805 - R 74 -9.2 -3.53012 | opp_overlap 3590818, overlap 3590809 GCCTGCCCCGCGAAA GCTATACCCACA TCCG TGTGGGTATCAC GGTACTCTTGTTTAT TERM 4073 3590828 - 3590809 - R 76 -10.8 -2.64155 | opp_overlap 3590818, overlap 3590805 GCCCCGCGAAAGCTA TACCCACA TCCG TGTGGGTA TCACGGTACTCTTGT TERM 4074 3590937 - 3590952 + r 79 -9 -3.80622 | opp_overlap 3590934 3590929 3590937, overlap 3590928 CCCCAAAGTAAGTCA GCCTTC GAAT GAAGGC TTATTACATTTATCT TERM 4075 3591232 - 3591216 - R 72 -9.5 -3.01712 | CCGCTCGTTCGAACA GTATCTC TTT GAGATAC CTCACCCTGAAACCG Spea_2932 3592519 - 3591482 - | transposase IS116/IS110/IS902 family protein TERM 4076 3593633 - 3593660 + H 83 -10.6 -3.73224 | overlap 3593637 GTTGAAGAAATAGTC GTAATGCCCACA CGGA TGTGGGCATAGC TTTCGTAAAAGATAG TERM 4077 3593637 - 3593656 + H 81 -12.2 -2.67803 | overlap 3593633 AAGAAATAGTCGTAA TGCCCACA CGGA TGTGGGCA TAGCTTTCGTAAAAG Spea_2933 3593759 - 3594796 + | hypothetical protein Spea_2934 3595090 - 3595416 + | peptidase Spea_2935 3595533 - 3596222 + | two component transcriptional regulator Spea_2936 3596206 - 3597759 + | histidine kinase Spea_2937 3597869 - 3599269 + | hypothetical protein TERM 4078 3599333 - 3599304 - T 100 -15.9 -3.59627 | opp_overlap 3599304 3599310, overlap 3599310 ATCAAACTGTTCAAA CAAAAACGCCGTC AATT GACGGCGTTTTTA TGTTTAATGCTAAGC TERM 4079 3599304 - 3599333 + T 95 -13.7 -3.48024 | opp_overlap 3599304 3599310, overlap 3599310 ATCAAACTGTTCAAA CAAAAACGCCGTC AATT GACGGCGTTTTTA TGTTTAATGCTAAGC TERM 4080 3599327 - 3599310 - T 100 -12.7 -5.27335 | opp_overlap 3599304 3599310, overlap 3599304 CTGTTCAAACAAAAA CGCCGTC AATT GACGGCG TTTTTATGTTTAATG TERM 4081 3599310 - 3599327 + T 100 -12.7 -5.22289 | opp_overlap 3599310 3599304, overlap 3599304 CTGTTCAAACAAAAA CGCCGTC AATT GACGGCG TTTTTATGTTTAATG Spea_2938 3600759 - 3599380 - | serine/threonine protein kinase Spea_2939 3601587 - 3600847 - | hypothetical protein Spea_2940 3601843 - 3601682 - | hypothetical protein TERM 4082 3602155 - 3602132 - g 75 -2.6 -5.1485 | gap 1 TAATGAACAGAAAAA CCTCATAAAAA GAG TTTTTA-AAGG TAACACTGTTCTGTG Spea_2941 3602067 - 3602294 + | hypothetical protein TERM 4083 3602362 - 3602336 - T 100 -11.7 -5.09204 | gap 1, opp_overlap 3602336 ATAGTCGAATAAAAA TGGCTGT-CAGC CTAT GCTGTACAGCCA TTTTTGCTTTCTGCG TERM 4084 3602336 - 3602362 + T 100 -11.7 -5.04601 | gap 1, opp_overlap 3602336 ATAGTCGAATAAAAA TGGCTGT-CAGC CTAT GCTGTACAGCCA TTTTTGCTTTCTGCG Spea_2942 3603161 - 3602391 - | hypothetical protein Spea_2943 3603368 - 3604591 + | peptidase T Spea_2944 3604973 - 3605695 + | nucleoside-diphosphate-sugar epimerase Spea_2945 3605789 - 3606526 + | hypothetical protein TERM 4085 3606869 - 3606889 + G 70 -4.7 -4.39287 | overlap 3606860 3606887 CCGCTACGAAGAGTT TCGTCCTTG GTA TAAAGACGA TTTTGATGTGGTTCA Spea_2946 3606579 - 3607121 + | NUDIX hydrolase Spea_2947 3607619 - 3607245 - | hypothetical protein TERM 4086 3607945 - 3607930 - R 93 -10.4 -4.88407 | opp_overlap 3607930 CCATCTAAGTAAAAA GGGAGC ATTT GCTCCC TTCTACTAACCACGA TERM 4087 3607930 - 3607945 + r 77 -10.4 -3.40403 | opp_overlap 3607930 CCATCTAAGTAAAAA GGGAGC ATTT GCTCCC TTCTACTAACCACGA Spea_2948 3609217 - 3607988 - | sodium/glutamate symporter TERM 4088 3608081 - 3608069 - G 74 -6.9 -4.35483 | CGGCACGATAATAAA GGCCC TGT GAGCC GCACCGTACTGCTGC TERM 4089 3608226 - 3608215 - G 76 -4.4 -5.00846 | overlap 3608204 TAAATACCACAAAAA TGGT AAAT ACCA CCGACAAGAATACCT Spea_2949 3609712 - 3610980 + | sodium:dicarboxylate symporter TERM 4090 3611042 - 3611069 + T 82 -11.4 -3.15236 | opp_overlap 3611048, overlap 3611048 ATAAACACTGATACG AAAAAAGGCACC CTAA GGTGCCTTTTTA TTCGCTATCACTTTC TERM 4091 3611048 - 3611063 + T 93 -10.4 -5.12068 | opp_overlap 3611048, overlap 3611042 ACTGATACGAAAAAA GGCACC CTAA GGTGCC TTTTTATTCGCTATC TERM 4092 3611063 - 3611048 - T 100 -10.4 -5.22312 | opp_overlap 3611048 3611042 ACTGATACGAAAAAA GGCACC CTAA GGTGCC TTTTTATTCGCTATC Spea_2950 3612001 - 3611087 - | indigoidine synthase A family protein Spea_2951 3613086 - 3611995 - | ribokinase-like domain-containing protein TERM 4093 3612556 - 3612570 + g 74 -5.6 -4.58395 | opp_overlap 3612558, overlap 3612558 TTCATGGGTCTTTAA CACAGC AAC GCTGAG TTTTTCCAAAATCGC TERM 4094 3613123 - 3613137 + r 90 -8.6 -4.90525 | opp_overlap 3613114 GCCAAACAAACATTT GTTTGG ATA CCAAAC TTTTGTTTAAACTTG Spea_2952 3615379 - 3613640 - | YidE/YbjL duplication TERM 4095 3615369 - 3615357 - G 73 -4.1 -4.84539 | TAACTAAACACAAAA CTGAA TAA CTCAG AAATATTCATAATCA TERM 4096 3615429 - 3615410 - R 93 -10.7 -5.04597 | AGTTATATAGAAAAA GGCCGTC TTTATG GACGGCC TCTCGACTAATTAAC Spea_2953 3616834 - 3615440 - | glutamate decarboxylase Spea_2954 3617318 - 3617656 + | antibiotic biosynthesis monooxygenase Spea_2955 3617943 - 3617737 - | hypothetical protein TERM 4097 3617819 - 3617832 + g 88 -8.1 -4.86001 | opp_overlap 3617819 TTAGCTAAGCGATAA CTGCC ATGA GGCAG TTTTTCTAGGCTAAT Spea_2956 3618911 - 3618060 - | hypothetical protein TERM 4098 3620246 - 3620231 - g 72 -6.2 -4.19704 | GAAGCTGAGCTAAAA GAGTTA AACC TAACTC AAGGTGACACTGTCG Spea_2957 3619205 - 3621316 + | dystroglycan-type cadherin domain-containing protein TERM 4099 3621344 - 3621371 + T 82 -11.4 -3.24563 | opp_overlap 3621349, overlap 3621349 GGTTTAAGTTCATAC AAAAAGGAGAGC TTCT GCTCTCCTTTTC TATTCTGCCAATTTT TERM 4100 3621366 - 3621349 - T 95 -11.3 -4.98522 | opp_overlap 3621344 3621349 AAGTTCATACAAAAA GGAGAGC TTCT GCTCTCC TTTTCTATTCTGCCA TERM 4101 3621349 - 3621366 + T 95 -11.3 -4.73682 | opp_overlap 3621349, overlap 3621344 AAGTTCATACAAAAA GGAGAGC TTCT GCTCTCC TTTTCTATTCTGCCA Spea_2958 3621894 - 3621439 - | hypothetical protein TERM 4102 3622282 - 3622255 - g 72 -2.6 -5.00616 | gap 1 GCTGTGCCTAAAAAA GTCGGCGGCAGCA TGA TGC-GCCCTCAAC GTGATAGTCGCTTTA Spea_2959 3622066 - 3622743 + | hypothetical protein TERM 4103 3623718 - 3623740 + G 77 -11.4 -3.13403 | opp_overlap 3623706 3623708, overlap 3623716 CAAGACTCATCCGCG TCTGGTGAGA TCG TCTCATCAGA TATTCGTCGCAAACC Spea_2960 3622860 - 3624209 + | Fmu (Sun) domain-containing protein TERM 4104 3624268 - 3624233 - T 93 -14.4 -2.7806 | gap 1, opp_overlap 3624241, overlap 3624241 CTCAAACGCTTAAAG TAA-AAAAACGCCATAC ATT GTATGGCGTTTTTGTTA GCAATTTTGCCGATA TERM 4105 3624259 - 3624241 - T 100 -13.2 -5.72207 | opp_overlap 3624241, overlap 3624233 CTTAAAGTAAAAAAA CGCCATAC ATT GTATGGCG TTTTTGTTAGCAATT TERM 4106 3624241 - 3624259 + T 100 -13.2 -5.08088 | opp_overlap 3624241 3624233 CTTAAAGTAAAAAAA CGCCATAC ATT GTATGGCG TTTTTGTTAGCAATT Spea_2961 3626101 - 3624404 - | diguanylate cyclase TERM 4107 3626389 - 3626363 - R 72 -10.2 -2.55 | opp_overlap 3626361 3626360 3626359 TAACAGGGGAAGTGA CTTAGGCGGATA AAA TACCTGCCTAAG CCGATTTTATATATC Spea_2962 3626953 - 3626414 - | YfaZ family protein Spea_2963 3627371 - 3628447 + | putative lipoprotein TERM 4108 3628477 - 3628491 + F 85 -8.5 -4.40572 | opp_overlap 3628477 TACAATCACTATAAA GGGGC TTAGC GCCCC TTTTCTGCCACTTAT TERM 4109 3628491 - 3628477 - f 79 -8.5 -4.03093 | opp_overlap 3628477 TACAATCACTATAAA GGGGC TTAGC GCCCC TTTTCTGCCACTTAT Spea_2964 3628609 - 3629091 + | glutathione peroxidase TERM 4110 3629262 - 3629282 + T 100 -11.1 -5.70829 | opp_overlap 3629260 3629263, overlap 3629263 CAATGTAGATCAATC AGGCAACCC CTT GGGTTGCCC TTTTTTTATCCTGTT TERM 4111 3629263 - 3629281 + T 100 -14.6 -4.00057 | opp_overlap 3629260 3629263, overlap 3629262 AATGTAGATCAATCA GGCAACCC CTT GGGTTGCC CTTTTTTTATCCTGT TERM 4112 3629281 - 3629263 - T 95 -14.6 -2.82291 | opp_overlap 3629263 3629262, overlap 3629260 AATGTAGATCAATCA GGCAACCC CTT GGGTTGCC CTTTTTTTATCCTGT TERM 4113 3629307 - 3629322 + T 71 -4 -4.84017 | CCTGTTTTCGCTCGC TGCATA TTTT TGTGCA TTTTTATGAAAAATT TERM 4114 3629551 - 3629572 + T 100 -9.5 -6.11243 | TGAACTAATTCTTTA TGGCAATCT CATT AGGTTGCCA TTTTTTTTATTGCCT TERM 4115 3629969 - 3629990 + T 100 -13.1 -5.76949 | CCTTCGCTATTGTTA TGGCAACCT ATTT AGGTTGCCA TTTTTTTTACCGCTA TERM 4116 3630374 - 3630395 + T 100 -13.1 -5.76949 | CCTTCGCTATTGTTA TGGCAACCT CTTT AGGTTGCCA TTTTTTTTACCGCTA TERM 4117 3630779 - 3630800 + T 100 -13.1 -6.11019 | AGAACTGATTCTTTA TGGCAACCT CATT AGGTTGCCA TTTTTTTTACTTTTT Spea_2965 3632607 - 3630814 - | peptidase M1 membrane alanine aminopeptidase TERM 4118 3633179 - 3633157 - g 82 -7 -4.91109 | overlap 3633159 GGCCTATGAGAAAAA GGGCCAAGTT TGG AACTTAGCGC ACGAGTACGTACATT Spea_2966 3632720 - 3633634 + | collagenase TERM 4119 3633677 - 3633662 - T 93 -10.4 -4.77759 | opp_overlap 3633662 ATAACCCATTAAAAA GGCCTC AATT GAGGCC TTTTTTGCTTTTCAT TERM 4120 3633662 - 3633677 + T 100 -10.4 -5.48054 | opp_overlap 3633662 ATAACCCATTAAAAA GGCCTC AATT GAGGCC TTTTTTGCTTTTCAT Spea_2967 3634693 - 3633722 - | phosphate binding protein TERM 4121 3634829 - 3634842 + r 86 -8.1 -4.98522 | opp_overlap 3634829 TTTTATACTAAAAAA CAGGC AGCA GCCTG TTTTTATATGACATT TERM 4122 3634842 - 3634829 - R 91 -8.1 -5.21709 | opp_overlap 3634829 TTTTATACTAAAAAA CAGGC AGCA GCCTG TTTTTATATGACATT Spea_2968 3636215 - 3634896 - | PAS/PAC sensor signal transduction histidine kinase TERM 4123 3635108 - 3635095 - G 72 -3.1 -4.95155 | opp_overlap 3635098 TCGACACGATAAAAA CGTTC GGTT AAACG ACCGATATGGTGAGG TERM 4124 3635116 - 3635139 + g 72 -8.2 -3.82202 | GTTAAACGACCGATA TGGTGAGG CGCAATTC CCTCACCA TTATCTTTAACACTA Spea_2969 3636976 - 3636287 - | two component transcriptional regulator TERM 4125 3637410 - 3637397 - R 85 -5.9 -5.27779 | opp_overlap 3637397 TTCAAGATCAAAAAA GAGGC CTAA GCCCC TTGTTATCAATATGC Spea_2970 3638386 - 3637436 - | porin TERM 4126 3638181 - 3638171 - G 71 -6.8 -4.09685 | opp_overlap 3638163 3638165 TTCTACTGTGTAAAA CGCT TCT AGCG AGTTACTTAACTCGA TERM 4127 3638586 - 3638562 - H 77 -8 -4.23707 | AGAAAGGGGAAGAAA TGTGACACTT TGATG AAATGTCACA TAGCCATGATTCAAG Spea_2971 3638676 - 3639587 + | recombination associated protein TERM 4128 3639611 - 3639626 + T 100 -11.8 -4.8048 | opp_overlap 3639611 ATGTGTTAATAAAAA GGCGCC TAAT GGCGCC TTTTTGCTCTCCCAG TERM 4129 3639626 - 3639611 - T 100 -11.8 -5.06816 | opp_overlap 3639611 ATGTGTTAATAAAAA GGCGCC TAAT GGCGCC TTTTTGCTCTCCCAG Spea_2972 3641452 - 3639647 - | peptidase M61 domain-containing protein TERM 4130 3641080 - 3641070 - G 80 -5.4 -5.08824 | CTCGCATCTAAAAAA GCAT GGG ATGC ATCGATATGATTGAC TERM 4131 3641602 - 3641612 + G 73 -4 -4.90455 | TTGTAATTTCCCTAG TATC CTT GATA TTTTTATCACTCTCT TERM 4132 3642385 - 3642369 - g 72 -6.5 -4.28994 | GATGAGGCACTAAAA GCGGC TCATAAT GCCGC CGATGCTTTTAGTCA TERM 4133 3643731 - 3643718 - g 72 -6.7 -4.30809 | GAAGAGCCATCAAAA CATCG ATAT CGATG AAGATAAAATCGCCA Spea_2973 3641580 - 3643751 + | tetratricopeptide domain-containing protein Spea_2974 3643872 - 3645428 + | diguanylate cyclase Spea_2975 3645507 - 3646859 + | hypothetical protein TERM 4134 3647149 - 3647128 - g 83 -13.7 -2.56914 | overlap 3647124 GATGGCATGAACTTA GTGCGGCGC ATCC ACGCCGCAC AGCCTAACGAATCTG TERM 4135 3647338 - 3647302 - g 100 -8.5 -5.31275 | CCTGACTACAAAAAA GGCCGTAAGCCCATGCC TGA AGCCTTGGCAAACGGCC TCAATGACATCAAAG Spea_2976 3647092 - 3647862 + | exonuclease IX Spea_2977 3647968 - 3648354 + | hypothetical protein TERM 4136 3648416 - 3648447 + T 83 -11.1 -3.62354 | gap 1, opp_overlap 3648422, overlap 3648422 GTCTTTTCTATGAAG CAAAAA-GCAGCGA AGTTA TCGCTGCTTTTTTG TGTTTGGTTTCGAGA TERM 4137 3648440 - 3648422 - T 93 -10.3 -4.90266 | opp_overlap 3648416 3648422 TCTATGAAGCAAAAA GCAGCGA AGTTA TCGCTGC TTTTTTGTGTTTGGT TERM 4138 3648422 - 3648440 + T 100 -10.3 -5.5762 | opp_overlap 3648422, overlap 3648416 TCTATGAAGCAAAAA GCAGCGA AGTTA TCGCTGC TTTTTTGTGTTTGGT Spea_2978 3649491 - 3648853 - | multiple antibiotic resistance (MarC)-related protein TERM 4139 3649568 - 3649585 + r 93 -9.9 -5.055 | opp_overlap 3649568, overlap 3649584 TCAAGACAAAAAAAA CCGAGAT AATC ATCTCGG TTTTTTAAAAGTTAA TERM 4140 3649585 - 3649568 - R 100 -9.9 -6.10295 | opp_overlap 3649568 3649584 TCAAGACAAAAAAAA CCGAGAT AATC ATCTCGG TTTTTTAAAAGTTAA TERM 4141 3649608 - 3649620 + r 77 -4.8 -4.9218 | AAAGTTAACAAATCT GGCT TAATC AGCC TTTTTGTACTCGGTA Spea_2979 3652406 - 3649611 - | peptidase S9 prolyl oligopeptidase TERM 4142 3651862 - 3651852 - G 74 -5.4 -4.70583 | GTCATTAAGAGAAAA CAGT TCA ACTG TAGAGCCTTTGTCAT TERM 4143 3652516 - 3652501 - H 87 -3.2 -5.71712 | opp_overlap 3652502, overlap 3652502 CCCTACAGAAAAAAA CGTGAG ATCG CTCACT CTTTCCTGTAAAATT TERM 4144 3652515 - 3652502 - H 71 -6.7 -4.01943 | opp_overlap 3652502, overlap 3652501 CCTACAGAAAAAAAC GTGAG ATCG CTCAC TCTTTCCTGTAAAAT Spea_2980 3652644 - 3653654 + | isocitrate dehydrogenase TERM 4145 3653675 - 3653698 + T 100 -16.8 -5.1861 | opp_overlap 3653675 TTGAGTGACTAAAAA GGCCCCATGT TTGC ACATGGGGCC TTTTTTAATGCTCAG TERM 4146 3653698 - 3653675 - T 100 -16.8 -4.7497 | opp_overlap 3653675 TTGAGTGACTAAAAA GGCCCCATGT TTGC ACATGGGGCC TTTTTTAATGCTCAG Spea_2981 3654832 - 3653750 - | putative RNA 2'-O-ribose methyltransferase TERM 4147 3654983 - 3654942 - R 83 -12.5 -2.66602 | opp_overlap 3654949 3654951, overlap 3654951 TTATTGAATAATTGA TATAAAAAAGCGGCCAACA AAGT TGTTGCCCGCTATTTTACA CTGTTCATGCTTAGC TERM 4148 3654949 - 3654976 + r 82 -8.4 -4.20042 | opp_overlap 3654942 3654951, overlap 3654951 ATAATTGATATAAAA AAGCGGCCAACA AAGT TGTTGCCCGCTA TTTTACACTGTTCAT TERM 4149 3654951 - 3654974 + r 83 -11 -3.69449 | opp_overlap 3654951 3654942, overlap 3654949 AATTGATATAAAAAA GCGGCCAACA AAGT TGTTGCCCGC TATTTTACACTGTTC TERM 4150 3654974 - 3654951 - R 100 -11 -5.38951 | opp_overlap 3654949 3654951, overlap 3654942 AATTGATATAAAAAA GCGGCCAACA AAGT TGTTGCCCGC TATTTTACACTGTTC Spea_2982 3655460 - 3655074 - | hypothetical protein TERM 4151 3655488 - 3655474 - R 71 -6.4 -4.1466 | overlap 3655465 ATCTAACCTCCAAAA GGCTAT CAA ACAGCC AAAGATAAATCATAA TERM 4152 3655565 - 3655552 - R 76 -6.7 -4.32177 | TTACTGCACAATAAA CGCTT TGAT AAGCG CGACAGTCTCAGCTA Spea_2983 3656271 - 3655537 - | hydrolase of the alpha/beta-hydrolase fold-like protein Spea_2984 3657163 - 3656252 - | DNA-binding transcriptional activator GcvA Spea_2985 3657345 - 3657578 + | hypothetical protein TERM 4153 3657607 - 3657621 + T 100 -7.1 -5.64274 | opp_overlap 3657607 TCTTCAACTTTTAAA CCACC AGCTA GGTGG TTTTTTTGTGCCTAC TERM 4154 3657682 - 3657702 + T 90 -12.6 -3.63895 | opp_overlap 3657682 TCTAGATACAAAAAA GGCGACTG ATTTA CAGTCGCC TTTACCATACTTACG TERM 4155 3657702 - 3657682 - T 100 -12.6 -5.4251 | opp_overlap 3657682 TCTAGATACAAAAAA GGCGACTG ATTTA CAGTCGCC TTTACCATACTTACG Spea_2986 3659196 - 3657742 - | thiamine biosynthesis protein ThiI TERM 4156 3659373 - 3659345 - R 95 -9 -5.47159 | gap 1, opp_overlap 3659345 TCTAATAAACAAAAA CACGCAACA-GAG TGGC CTCATATTGCGTG TTTTCTAGTGCCTAT TERM 4157 3659345 - 3659373 + r 76 -6.8 -4.48072 | gap 1, opp_overlap 3659345 TCTAATAAACAAAAA CACGCAACA-GAG TGGC CTCATATTGCGTG TTTTCTAGTGCCTAT Spea_2987 3660365 - 3659397 - | flagellar motor protein MotB TERM 4158 3660315 - 3660297 - G 73 -9.6 -3.33361 | overlap 3660288 CAGCAACGACATCAA GTCGGCAA ATG TTGCCAAC CAAAGCGGCGCACCT Spea_2988 3661137 - 3660370 - | flagellar motor protein PomA Spea_2989 3661548 - 3661796 + | exodeoxyribonuclease VII, small subunit Spea_2990 3661797 - 3662678 + | polyprenyl synthetase Spea_2991 3662701 - 3664566 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 4159 3664645 - 3664616 - T 93 -12.3 -3.80745 | opp_overlap 3664622, overlap 3664622 AAGAGAATAGCTAAA TAAAAAGGACTGC CATG GCAGTCCTTTTTT TATTGCCAGTACTCA TERM 4160 3664639 - 3664622 - T 100 -11.3 -5.31519 | opp_overlap 3664622, overlap 3664616 ATAGCTAAATAAAAA GGACTGC CATG GCAGTCC TTTTTTTATTGCCAG TERM 4161 3664622 - 3664639 + T 100 -11.3 -5.7946 | opp_overlap 3664622 3664616 ATAGCTAAATAAAAA GGACTGC CATG GCAGTCC TTTTTTTATTGCCAG Spea_2992 3665299 - 3664697 - | GrpE protein Spea_2993 3665400 - 3666278 + | ATP-NAD/AcoX kinase TERM 4162 3666351 - 3666319 - f 70 -8.6 -3.38314 | gap 1, overlap 3666317 TCTAATCCTTAAATA TTGCCGATATGCC AAACTAGA GGC-TATCGGCAA CACTATCGCCCGCTT TERM 4163 3667029 - 3667041 + G 78 -5.5 -4.78107 | overlap 3667016 3667013 TTTAACGCCGATTAT CAGCG TTA TGCTG TTTTTAGTCCTACTC Spea_2994 3666988 - 3668631 + | L-lactate permease TERM 4164 3668687 - 3668703 + F 100 -13.7 -4.20516 | opp_overlap 3668687 AATCATATCGTGAAA GCCGCAG AAA CTGCGGC TTTATTCACTCAAAA TERM 4165 3668703 - 3668687 - f 95 -13.7 -3.60006 | opp_overlap 3668687 AATCATATCGTGAAA GCCGCAG AAA CTGCGGC TTTATTCACTCAAAA TERM 4166 3669557 - 3669568 + G 88 -5.8 -5.50499 | CGCGCTTTAAAGCCT CTGC CATG GCAG TTTTTTTCAATATGG TERM 4167 3670875 - 3670889 + G 73 -11.4 -2.71712 | overlap 3670874 GGTTTATTTCCCTGC GTGCGG TGG CCGCAC CTTTGGACCAACGCC Spea_2995 3668740 - 3671559 + | FAD linked oxidase domain-containing protein TERM 4168 3671628 - 3671600 - f 73 -10.3 -2.81951 | opp_overlap 3671600 3671603, overlap 3671599 3671603 TTAGCAAGATAGAAT CCATTAGGGGCAG CGA CTGCCCCTAATTC TTTTCATTTACATCC TERM 4169 3671600 - 3671628 + F 91 -10.3 -4.56914 | opp_overlap 3671600 3671599 3671603, overlap 3671603 TTAGCAAGATAGAAT CCATTAGGGGCAG CGA CTGCCCCTAATTC TTTTCATTTACATCC TERM 4170 3671603 - 3671625 + F 100 -16.4 -4.38472 | opp_overlap 3671600 3671599 3671603, overlap 3671600 GCAAGATAGAATCCA TTAGGGGCAG CGA CTGCCCCTAA TTCTTTTCATTTACA TERM 4171 3671625 - 3671603 - f 100 -16.4 -2.66335 | opp_overlap 3671603 3671600, overlap 3671600 3671599 GCAAGATAGAATCCA TTAGGGGCAG CGA CTGCCCCTAA TTCTTTTCATTTACA TERM 4172 3671863 - 3671881 + F 81 -7.4 -4.60889 | opp_overlap 3671863 TCCGCTTACTAAAAA GTCGGCTT TTT AAGCAGAC TTTTTGCGGCTACTT TERM 4173 3671881 - 3671863 - f 83 -7.4 -4.72272 | opp_overlap 3671863 TCCGCTTACTAAAAA GTCGGCTT TTT AAGCAGAC TTTTTGCGGCTACTT Spea_2996 3671949 - 3672692 + | hypothetical protein TERM 4174 3672820 - 3672809 - g 80 -7.2 -4.57569 | opp_overlap 3672811 3672811, overlap 3672810 3672811 CTACTGCGTGAAAAA CGCG ACCG CGCG GCGGGCAGTTTGCCT Spea_2997 3672701 - 3674074 + | hypothetical protein TERM 4175 3674130 - 3674116 - g 73 -4.2 -4.77157 | overlap 3674118 TTAACGCATTAAAAA GCGC CGCGATT GCGC CTCAATCCATGCCTG Spea_2998 3674079 - 3674648 + | hypothetical protein TERM 4176 3674724 - 3674754 + T 100 -10.5 -5.27399 | opp_overlap 3674724 ACATCCATATAAAAA GCCCTAAGCTCAC TAGAC GTAAGTTTAGGGC TTTTTTAATATGTTA TERM 4177 3674754 - 3674724 - T 93 -10.5 -4.99638 | opp_overlap 3674724 ACATCCATATAAAAA GCCCTAAGCTCAC TAGAC GTAAGTTTAGGGC TTTTTTAATATGTTA Spea_2999 3675970 - 3674780 - | TonB family protein Spea_3000 3677544 - 3676168 - | MATE efflux family protein TERM 4178 3677488 - 3677505 + g 73 -11.3 -2.60075 | overlap 3677487 CTCGGTGATCATTGG CGAGTCG GTTG CGACTCG ATTAGTTCCCGCCGG Spea_3001 3678838 - 3677702 - | cobalamin synthesis protein P47K TERM 4179 3678131 - 3678149 + g 84 -7.5 -4.7339 | opp_overlap 3678130 GCTTTTTCTTAATAT TTTAGGC TTGCT GCCTAAA TTTTTAGCATTTGTT TERM 4180 3678896 - 3678910 + r 70 -5.6 -4.32201 | overlap 3678898 ATTAAGCAGAGCTGT CACGCC ATA GGCGTA TTTTAGATTAATTAG TERM 4181 3678898 - 3678908 + r 70 -8.2 -3.75653 | overlap 3678896 TAAGCAGAGCTGTCA CGCC ATA GGCG TATTTTAGATTAATT Spea_3002 3679294 - 3678953 - | hypothetical protein TERM 4182 3679607 - 3679593 - g 80 -7 -4.64657 | opp_overlap 3679595 3679595, overlap 3679595 TGAAATTTCTAAAAA CTGCCG CTG CGGCTG CTATCTCTGTTGCGT Spea_3003 3679577 - 3680995 + | hypothetical protein TERM 4183 3681052 - 3681082 + T 90 -9 -4.94992 | opp_overlap 3681054, overlap 3681054 CAGTATTAGATACAA AACGCGCAATAGAG TCT TTCTACTGCGCGTA TTTTTATGGCTTTCG TERM 4184 3681054 - 3681080 + T 90 -11.6 -4.08693 | opp_overlap 3681054, overlap 3681052 GTATTAGATACAAAA CGCGCAATAGAG TCT TTCTACTGCGCG TATTTTTATGGCTTT TERM 4185 3681080 - 3681054 - T 100 -13.1 -4.62984 | opp_overlap 3681054 3681052 GTATTAGATACAAAA CGCGCAATAGA GTCTT TCTACTGCGCG TATTTTTATGGCTTT Spea_3004 3681465 - 3681118 - | hypothetical protein TERM 4186 3681554 - 3681526 - R 93 -8.4 -5.28176 | gap 1, opp_overlap 3681526 TTTACCCATAAAAAA GTGAACAT-TCTA GTAG TAGATATGTTCAC TTTGATTAAGCAATA TERM 4187 3681526 - 3681554 + r 77 -8.4 -3.90588 | gap 1, opp_overlap 3681526 TTTACCCATAAAAAA GTGAACAT-TCTA GTAG TAGATATGTTCAC TTTGATTAAGCAATA Spea_3005 3682923 - 3681586 - | DEAD/DEAH box helicase domain-containing protein TERM 4188 3683167 - 3683147 - R 76 -8.9 -3.6869 | opp_overlap 3683146, overlap 3683150 CAGAGTAATCTTAAA CGACGCGGT ATA ACCGCGCAG AATATTTACTCAGCT TERM 4189 3683164 - 3683150 - R 81 -11.4 -2.94679 | opp_overlap 3683146, overlap 3683147 AGTAATCTTAAACGA CGCGGT ATA ACCGCG CAGAATATTTACTCA Spea_3006 3686429 - 3683235 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 4190 3683378 - 3683388 + g 77 -6.8 -4.50058 | overlap 3683364 CTACAGCGCTGTCAT CTGC GCG GCAG TTTTCGTTCTGAGTA Spea_3007 3687310 - 3686870 - | OsmC family protein TERM 4191 3688032 - 3688046 + G 71 -7.2 -4.11692 | opp_overlap 3688034 CGATATTATCGATAT TAGAAC CAA GTTCTA TTTTGAGAGTAAGTA TERM 4192 3688126 - 3688108 - g 86 -4.5 -5.53288 | gap 1, overlap 3688110 CCTAATGGAAAAAAA CCCGC-CG TAAC CGCGCAGG TTGAGATGATCTGCA TERM 4193 3688190 - 3688202 + G 71 -3.4 -4.84761 | overlap 3688201 CGCAGTTAATTGCTC GCTT AGGTG AAGC TTTTTCTGAAGCTGT Spea_3008 3687751 - 3688227 + | thioesterase superfamily protein Spea_3009 3689818 - 3688340 - | diguanylate cyclase/phosphodiesterase TERM 4194 3689017 - 3689041 + g 72 -6.4 -4.21194 | gap 1, overlap 3689021 AGGCCTCTACTTGCT CACAGCC-CCC TTTG GGGAGGCTTTG TTTTGGCTGATACAC TERM 4195 3689021 - 3689037 + g 74 -5.8 -4.6951 | gap 1, overlap 3689017 CTCTACTTGCTCACA GCC-CCC TTTG GGGAGGC TTTGTTTTGGCTGAT Spea_3010 3690785 - 3689943 - | putative signal transduction protein TERM 4196 3690973 - 3690954 - H 74 -6.4 -4.46926 | TATTTTATTATAAAA GACTCAGA TCTA CCCGAGTC CACTTATTATATTCG Spea_3011 3691074 - 3692441 + | peptidase U32 TERM 4197 3692483 - 3692466 - T 88 -11.3 -3.76492 | opp_overlap 3692466 CTGAACTTGATGAAA GGCCTCA ATTT TGAGGCC TTTTTTGTTTTCAGC TERM 4198 3692466 - 3692483 + T 100 -11.3 -5.79595 | opp_overlap 3692466 CTGAACTTGATGAAA GGCCTCA ATTT TGAGGCC TTTTTTGTTTTCAGC TERM 4199 3692504 - 3692525 + T 70 -8.7 -3.4052 | opp_overlap 3692505, overlap 3692505 3692524 TGTTTTCAGCCCTAA ACCACCTAC TTCA GTAGGTGGG TTCATTACATTAACC TERM 4200 3692524 - 3692505 - T 89 -12.2 -3.57144 | opp_overlap 3692505 3692504 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG GTTCATTACATTAAC TERM 4201 3692505 - 3692524 + T 81 -12.2 -2.63991 | opp_overlap 3692505, overlap 3692504 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG GTTCATTACATTAAC Spea_3012 3693790 - 3692546 - | carbohydrate-selective porin OprB TERM 4202 3693283 - 3693297 + g 76 -4.2 -4.93547 | ATGTATCTAAGTAGC CCGC CATTAAT GCGG TTTTTCCTTGATTGA Spea_3013 3694554 - 3693835 - | hypothetical protein TERM 4203 3694186 - 3694168 - G 86 -11.8 -3.54424 | TTTGACGCCGTTAAA CTTTGTCG GCA CGACAAAG CCTGACATGCTGACC TERM 4204 3694657 - 3694676 + r 83 -12.2 -3.10343 | opp_overlap 3694657, overlap 3694658 TAGTGCTTTAAAAAA GGCAAGCA ACGC TGCTTGCC TTAGGTACTAAGTAT TERM 4205 3694676 - 3694657 - R 100 -12.2 -5.0133 | opp_overlap 3694657 3694658 TAGTGCTTTAAAAAA GGCAAGCA ACGC TGCTTGCC TTAGGTACTAAGTAT Spea_3014 3696343 - 3694964 - | amidohydrolase Spea_3015 3697571 - 3696561 - | AraC family transcriptional regulator TERM 4206 3697796 - 3697811 + H 80 -8.2 -4.33165 | TCACTTTTTAGACTG CTCCGC ATAG GCGGGG TTTTAGTAAATTTAA Spea_3016 3697843 - 3698100 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4207 3698138 - 3698121 - f 93 -11.3 -4.33417 | opp_overlap 3698121 CTTAGCGATAACAAA TGGAGCC AATC GGCTCCA TTTTTGTTTTTAACA TERM 4208 3698121 - 3698138 + F 100 -11.3 -5.61881 | opp_overlap 3698121 CTTAGCGATAACAAA TGGAGCC AATC GGCTCCA TTTTTGTTTTTAACA TERM 4209 3698545 - 3698527 - g 79 -10.3 -3.54543 | opp_overlap 3698527 3698525 ACTTATCGTGCGAAA CCCAAGC GGACA GCTTGGG TATTTAGCGGCGTTT TERM 4210 3698527 - 3698545 + G 77 -10.3 -3.3579 | opp_overlap 3698527, overlap 3698525 ACTTATCGTGCGAAA CCCAAGC GGACA GCTTGGG TATTTAGCGGCGTTT Spea_3017 3698270 - 3699988 + | pseudouridine synthase TERM 4211 3700115 - 3700078 - T 86 -7.1 -5.06451 | opp_overlap 3700082, overlap 3700079 3700082 GATTAGGCCAAAAAA GTAAGTCATGCATAACC GACA AGTGATGCATGACTCAT TGAGCAAAAATTATC TERM 4212 3700114 - 3700079 - T 83 -10.6 -3.63148 | opp_overlap 3700082, overlap 3700078 3700082 ATTAGGCCAAAAAAG TAAGTCATGCATAACC GACA AGTGATGCATGACTCA TTGAGCAAAAATTAT TERM 4213 3700082 - 3700111 + T 70 -9.4 -2.71011 | opp_overlap 3700082 3700079 3700078 AGGCCAAAAAAGTAA GTCATGCATAAC CGACAA GTGATGCATGAC TCATTGAGCAAAAAT TERM 4214 3700111 - 3700082 - T 84 -10.1 -3.93769 | opp_overlap 3700082, overlap 3700079 3700078 AGGCCAAAAAAGTAA GTCATGCATAACC GACA AGTGATGCATGAC TCATTGAGCAAAAAT Spea_3018 3700645 - 3700133 - | sterol-binding domain-containing protein Spea_3019 3700778 - 3701779 + | peptidase U32 Spea_3020 3701803 - 3702660 + | peptidase U32 TERM 4215 3702725 - 3702701 - f 70 -9.3 -3.19522 | opp_overlap 3702701 TCATTCAATACCCAA GCCCGCTTATC AAA AATAAGTGGGC TTTTTATTCGTTGAT TERM 4216 3702701 - 3702725 + F 100 -10.8 -5.20534 | opp_overlap 3702701 TCATTCAATACCCAA GCCCGCTTAT CAAAA ATAAGTGGGC TTTTTATTCGTTGAT Spea_3021 3703107 - 3704237 + | S-(hydroxymethyl)glutathione dehydrogenase TERM 4217 3704276 - 3704251 - T 71 -7.6 -3.79668 | opp_overlap 3704251 3704254 3704257, overlap 3704254 AGGTAATCGACTAAA CAATAGGCGC TCTCGG GCGCTTATTG TTTTCAATACCTATC TERM 4218 3704251 - 3704276 + T 89 -10.5 -4.20531 | opp_overlap 3704251 3704254, overlap 3704254 3704257 AGGTAATCGACTAAA CAATAGGCGCT CTCG GGCGCTTATTG TTTTCAATACCTATC TERM 4219 3704254 - 3704273 + T 71 -6.4 -4.22214 | opp_overlap 3704254 3704251, overlap 3704251 3704257 TAATCGACTAAACAA TAGGCGCT CTCG GGCGCTTA TTGTTTTCAATACCT Spea_3022 3705062 - 3704358 - | hypothetical protein TERM 4220 3706383 - 3706367 - g 81 -8.7 -4.38154 | opp_overlap 3706377 AGAGTCGTGAGAAAA TGCAGCA AAA TGCCGCA GGTATTCATCAGCTG Spea_3023 3705427 - 3706971 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 4221 3707736 - 3707749 + G 78 -5.3 -5.06816 | ACGATCTACTACCTG TACTG TTTT CAGTA TTTTTATTCGCAGGT Spea_3024 3707330 - 3708685 + | nucleoside recognition domain-containing protein TERM 4222 3708732 - 3708703 - f 93 -12.3 -3.90048 | opp_overlap 3708709, overlap 3708709 TTGCCCCCAAAAATA TAAAAAGGAGCGA ATTT TCGCTCCTTTTTT GTATCTGTAATCCTT TERM 4223 3708726 - 3708709 - f 100 -11.3 -5.36364 | opp_overlap 3708709, overlap 3708703 CCAAAAATATAAAAA GGAGCGA ATTT TCGCTCC TTTTTTGTATCTGTA TERM 4224 3708709 - 3708726 + F 100 -11.3 -5.4492 | opp_overlap 3708709 3708703 CCAAAAATATAAAAA GGAGCGA ATTT TCGCTCC TTTTTTGTATCTGTA TERM 4225 3709135 - 3709118 - g 76 -4.8 -4.83593 | AACAACTATTAAAAA TGGCGC GTGATG GCACCA AGCTTGTCTATATCC Spea_3025 3708844 - 3709725 + | metallophosphoesterase TERM 4226 3709826 - 3709807 - T 100 -12.2 -5.25699 | opp_overlap 3709807 ACTACATAACAAAAA GCCAGTCA CTGA TGACTGGC TTTTTTATGGTTATG TERM 4227 3709807 - 3709826 + T 100 -12.2 -5.39755 | opp_overlap 3709807 ACTACATAACAAAAA GCCAGTCA CTGA TGACTGGC TTTTTTATGGTTATG Spea_3026 3711229 - 3709871 - | xanthine/uracil/vitamin C permease TERM 4228 3710285 - 3710266 - G 79 -9.2 -4.05033 | CCGACTCGATATAAA CAGCAGCG GGTG CGCCGCCG ACTGCGCCAGCAAAG TERM 4229 3711557 - 3711540 - R 100 -7.7 -5.63645 | opp_overlap 3711540 TTAAAACACAAAAAA GCAGCAC CTAA GTACTGC TTTCACACTGCCAAC Spea_3027 3712824 - 3711580 - | DEAD/DEAH box helicase domain-containing protein Spea_3028 3713932 - 3712934 - | amino acid ABC transporter periplasmic protein TERM 4230 3713644 - 3713660 + g 88 -12.3 -3.60627 | opp_overlap 3713617 TTTGAGTGACGACCT GCTCGAG AGG CTCGAGC TTTACCGTGCCATAC Spea_3029 3714085 - 3715350 + | glyceraldehyde 3-phosphate dehydrogenase Spea_3030 3715510 - 3716079 + | hypothetical protein Spea_3031 3716239 - 3716646 + | type IV pilus assembly PilZ TERM 4231 3716693 - 3716710 + T 100 -12.7 -4.62069 | opp_overlap 3716693 AGCCTTAAGTAAAAA CGCCGCA GTAT TGCGGCG TTTTTACAATCAAAG TERM 4232 3716710 - 3716693 - T 100 -12.7 -4.86621 | opp_overlap 3716693 AGCCTTAAGTAAAAA CGCCGCA GTAT TGCGGCG TTTTTACAATCAAAG Spea_3032 3718134 - 3716761 - | DNA repair protein RadA TERM 4233 3717356 - 3717367 + g 77 -3.6 -5.10461 | CCCACGGTATCGACA TCGC CGAA GCGG TTTTTGTTGGCTCGA TERM 4234 3720152 - 3720138 - g 73 -4.2 -4.7373 | overlap 3720140 CGATGGCATGAAAAA TATCGC CAT GCGAAA ACTGGCTTCCGTCCC Spea_3033 3718285 - 3720702 + | type IV pilus assembly PilZ Spea_3034 3721255 - 3720794 - | hypothetical protein Spea_3035 3721676 - 3722407 + | SNARE associated Golgi protein TERM 4235 3722418 - 3722442 + T 100 -15.8 -3.75629 | AGTAACTCTTGGCTT CTGGCCCTGT ATCTA ACAGGGCCAG TTTGAATTCAGCCTG TERM 4236 3722708 - 3722687 - T 100 -11.5 -5.76633 | opp_overlap 3722687 CGAGATATAAAAAAA CCGTGAGGC ATAA GCCACACGG TTTCTTGTTCAGTAA TERM 4237 3722687 - 3722708 + T 93 -11.5 -4.46854 | opp_overlap 3722687 CGAGATATAAAAAAA CCGTGAGGC ATAA GCCACACGG TTTCTTGTTCAGTAA Spea_3036 3724632 - 3722797 - | sulfatase TERM 4238 3723712 - 3723701 - G 72 -3 -4.93296 | overlap 3723705 CGATTACGATAAAAA CTAT GCCA ATAG GTGGCTGGTAAGCCA TERM 4239 3724315 - 3724287 - G 72 -5.5 -4.4009 | gap 1, overlap 3724291 TGCCACCGGAGAAAA TCAT-TTCAACC AGTACA GGTTGAATATGA AAGCGATACTGGGCA TERM 4240 3724840 - 3724813 - R 93 -10.6 -5.16206 | opp_overlap 3724816, overlap 3724816 AAATTAATAGAAAAA GAATAGCGGCCC AAAA GAGCCGCTATTT TTGATTAACACTTTA TERM 4241 3724816 - 3724837 + r 93 -10.1 -4.86621 | opp_overlap 3724813 3724816 TTAATAGAAAAAGAA TAGCGGCCC AAAA GAGCCGCTA TTTTTGATTAACACT TERM 4242 3724837 - 3724816 - R 100 -12.3 -4.63863 | opp_overlap 3724816, overlap 3724813 TTAATAGAAAAAGAA TAGCGGCCC AAAA GAGCCGCTA TTTTTGATTAACACT Spea_3037 3725821 - 3724874 - | polysulphide reductase NrfD Spea_3038 3726390 - 3725818 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4243 3726094 - 3726071 - G 71 -7.4 -3.91084 | TCAGGGTTAATGAAA CGCACCTTGT AAGG ACAAGCCGCG ACACAATATAGACAG Spea_3039 3728679 - 3726403 - | molybdopterin oxidoreductase TERM 4244 3726994 - 3727011 + g 72 -5.5 -4.38116 | opp_overlap 3726994, overlap 3726996 TAGCGGCTTACCAAA GCTGACG TAAC CGTCATC TTTAATTTTTCTCAA TERM 4245 3728445 - 3728461 + g 100 -10.9 -5.06414 | GAGCACAAACTGCAC CGCCAAA AGA TTTGGCG TTTTTATTACCCAGA TERM 4246 3728966 - 3728987 + r 100 -14.5 -3.32647 | opp_overlap 3728966, overlap 3728944 ATTTTCGATACAAAA TGTGCGGCT TAAT AGCCGCACA TTAGTGTACTTAAAA TERM 4247 3728987 - 3728966 - R 100 -14.5 -4.52857 | opp_overlap 3728944 3728966 ATTTTCGATACAAAA TGTGCGGCT TAAT AGCCGCACA TTAGTGTACTTAAAA Spea_3040 3730807 - 3729023 - | histidine kinase TERM 4248 3729385 - 3729371 - G 82 -11.4 -3.63991 | CAGCACCTGCAATAA GCCGAC CCT GTCGGC GGTAATAAAGAATGG Spea_3041 3731040 - 3731651 + | two component LuxR family transcriptional regulator Spea_3042 3732630 - 3731722 - | alpha/beta hydrolase fold TERM 4249 3732635 - 3732645 + r 82 -4 -5.44119 | TGAATATTCAATGGT TAAG ACT CTTA TTTTTTTAAACTAAG TERM 4250 3732824 - 3732802 - R 93 -9.2 -5.19879 | opp_overlap 3732802 TTTTAAACAGAAAAA GCTCATAACA AAT TGCCATGAGC TTTTCGATTTATGTA Spea_3043 3733947 - 3732940 - | phosphoserine phosphatase SerB Spea_3044 3734026 - 3735138 + | membrane protein TERM 4251 3735184 - 3735155 - T 100 -13.7 -4.44915 | opp_overlap 3735161, overlap 3735161 TAACGAGTCATAAAA CAAAAACGGACGC ATAA GCGTCCGTTTTTT TTACACCGCAGCCAG TERM 4252 3735178 - 3735161 - T 100 -12.7 -5.54907 | opp_overlap 3735161, overlap 3735155 GTCATAAAACAAAAA CGGACGC ATAA GCGTCCG TTTTTTTTACACCGC TERM 4253 3735161 - 3735178 + T 100 -12.7 -5.75342 | opp_overlap 3735161 3735155 GTCATAAAACAAAAA CGGACGC ATAA GCGTCCG TTTTTTTTACACCGC Spea_3045 3735929 - 3735219 - | purine nucleoside phosphorylase Spea_3046 3737245 - 3736028 - | phosphopentomutase TERM 4254 3737213 - 3737182 - G 72 -10.2 -2.81768 | gap 1, overlap 3737175 3737166 3737181 CCACATCACCGAAAG CTTCGGCATCGTGCG CTG CGC-CAACGCCGAAA GAATCCAGCATCATG Spea_3047 3738590 - 3737259 - | thymidine phosphorylase Spea_3048 3739525 - 3738752 - | deoxyribose-phosphate aldolase TERM 4255 3739588 - 3739572 - R 77 -5.1 -4.90471 | opp_overlap 3739575, overlap 3739573 ATTTAAAACAGAAAA TTATCGC ACG GCGATAC CTTGAACTGGCTTAT TERM 4256 3739587 - 3739573 - R 72 -8.6 -3.52656 | opp_overlap 3739575, overlap 3739572 TTTAAAACAGAAAAT TATCGC ACG GCGATA CCTTGAACTGGCTTA TERM 4257 3740028 - 3740066 + r 95 -13.2 -3.66424 | opp_overlap 3740037 3740039, overlap 3740030 3740032 3740033 3740037 3740064 GCACTGTATTCGAGC TGTAAGATAGAGCCGCGA ATA TCGCGGCTCTGTCGTCTA TTTACAATAGTTTTA TERM 4258 3740030 - 3740064 + r 95 -13.6 -3.40134 | opp_overlap 3740037 3740039, overlap 3740028 3740032 3740033 3740037 ACTGTATTCGAGCTG TAAGATAGAGCCGCGA ATA TCGCGGCTCTGTCGTC TATTTACAATAGTTT TERM 4259 3740032 - 3740062 + r 100 -16.2 -3.26298 | opp_overlap 3740037 3740039, overlap 3740030 3740028 3740033 3740037 TGTATTCGAGCTGTA AGATAGAGCCGCGA ATA TCGCGGCTCTGTCG TCTATTTACAATAGT TERM 4260 3740033 - 3740061 + r 100 -19.7 -2.55297 | opp_overlap 3740037 3740039, overlap 3740032 3740030 3740028 3740037 GTATTCGAGCTGTAA GATAGAGCCGCGA ATA TCGCGGCTCTGTC GTCTATTTACAATAG TERM 4261 3740057 - 3740037 - R 100 -16.9 -3.07895 | opp_overlap 3740037 3740033 3740032 3740030 3740028, overlap 3740039 TCGAGCTGTAAGATA GAGCCGCGA ATA TCGCGGCTC TGTCGTCTATTTACA TERM 4262 3740037 - 3740057 + r 100 -16.9 -2.94872 | opp_overlap 3740037 3740039, overlap 3740033 3740032 3740030 3740028 TCGAGCTGTAAGATA GAGCCGCGA ATA TCGCGGCTC TGTCGTCTATTTACA TERM 4263 3740055 - 3740039 - R 93 -13.7 -3.09749 | opp_overlap 3740037 3740033 3740032 3740030 3740028, overlap 3740037 GAGCTGTAAGATAGA GCCGCGA ATA TCGCGGC TCTGTCGTCTATTTA TERM 4264 3740076 - 3740096 + r 72 -9.1 -3.35996 | opp_overlap 3740074 3740076 CGTCTATTTACAATA GTTTTAAGC GAT GCTTAGAAC TTGTAAGTAGCAGTA Spea_3049 3740953 - 3740090 - | nucleoside-specific channel-forming protein Tsx TERM 4265 3741283 - 3741261 - R 100 -13.5 -4.68908 | TTGAGCTAAAACAAA GACTGAGCC ATATA GGCTCAGTC TAAAAGAGGCTTACA Spea_3050 3742553 - 3741294 - | nucleoside transporter TERM 4266 3742310 - 3742293 - G 80 -6.3 -4.88293 | AATGGCAAAAATAAA GCCAACT TTGA AGTTAGC TAAATCACCGAATAA TERM 4267 3742435 - 3742423 - G 75 -2.6 -5.24647 | ACATACAAAACAAAA CCAC CGAAT GCGG CTTGAATTGCTAATG Spea_3051 3743506 - 3742733 - | TatD-related deoxyribonuclease Spea_3052 3743792 - 3743532 - | hypothetical protein TERM 4268 3743911 - 3743883 - R 100 -18.3 -5.00616 | opp_overlap 3743888, overlap 3743888 CCGTCCTTTAAAAAA CAAAACCCCAGGC ATA GCCTGGGGTTTTA GTATCGAATAATTAA TERM 4269 3743888 - 3743906 + r 100 -16 -4.35116 | opp_overlap 3743883 3743888 CTTTAAAAAACAAAA CCCCAGGC ATA GCCTGGGG TTTTAGTATCGAATA TERM 4270 3743906 - 3743888 - R 100 -16 -5.42198 | opp_overlap 3743888, overlap 3743883 CTTTAAAAAACAAAA CCCCAGGC ATA GCCTGGGG TTTTAGTATCGAATA Spea_3053 3745514 - 3743934 - | peptide chain release factor 3 TERM 4271 3744879 - 3744912 + g 71 -9.7 -3.19511 | gap 1, opp_overlap 3744878, overlap 3744878 3744873 AATCGCCTCATCAAG CTCT-GGGTTATCTAG CCC CTTGATGACCCGAGAG TCTTGGATTGTATGC TERM 4272 3745639 - 3745654 + r 79 -10.4 -3.56643 | opp_overlap 3745639 ACAGACAATAAAAAA GCCTCC TAAA GGAGGC TTTCAAGGATATAAA TERM 4273 3745654 - 3745639 - R 100 -10.4 -5.62045 | opp_overlap 3745639 ACAGACAATAAAAAA GCCTCC TAAA GGAGGC TTTCAAGGATATAAA Spea_3054 3746569 - 3745676 - | lipoprotein NlpI TERM 4274 3746702 - 3746718 + r 100 -13.7 -4.41494 | opp_overlap 3746702 TGCAGGCATAAAAAA GGAGGCC TAT GGCCTCC TTTTAATTCAAAGTG TERM 4275 3746718 - 3746702 - R 100 -13.7 -5.28176 | opp_overlap 3746702 TGCAGGCATAAAAAA GGAGGCC TAT GGCCTCC TTTTAATTCAAAGTG Spea_3055 3748855 - 3746741 - | polynucleotide phosphorylase/polyadenylase TERM 4276 3749511 - 3749524 + G 80 -6.7 -4.77775 | opp_overlap 3749511 TTCTATTACACTCAA GAGCT AACC AGCTC TTTATTTTCTAGCCT TERM 4277 3749956 - 3749966 + G 74 -5.4 -4.72986 | opp_overlap 3749956 CATTGGGACATGAAG TTGG CGA CCAA TTTTTAATACGAGTC TERM 4278 3750195 - 3750213 + G 72 -8.8 -3.63515 | ATCTATCCCGATGAC GGCCTTCG AGC CGAAGACC TTATTCGCCATGCCG Spea_3056 3749052 - 3751091 + | diguanylate cyclase/phosphodiesterase TERM 4279 3751091 - 3751081 - T 70 -3.2 -4.98436 | GTAACACCATAAAAA CCAG CAG CTAG CATTCCTCCCCTACT TERM 4280 3751216 - 3751232 + T 71 -9.5 -2.90496 | opp_overlap 3751229, overlap 3751214 CACTAAATCAGCCTC GGCATTT AAA AAATGCC TGATTTACAGGCACA TERM 4281 3751245 - 3751229 - T 88 -8 -5.08824 | opp_overlap 3751216 3751214 TCGGCATTTAAAAAA TGCCTG ATTTA CAGGCA CAAAAAAAGGAGGCA TERM 4282 3751268 - 3751254 - T 100 -11.4 -5.65177 | opp_overlap 3751254 ACAGGCACAAAAAAA GGAGGC ATA GCCTCC TTTTAATAGATCAGA TERM 4283 3751254 - 3751268 + T 93 -11.4 -4.2828 | opp_overlap 3751254 ACAGGCACAAAAAAA GGAGGC ATA GCCTCC TTTTAATAGATCAGA Spea_3057 3751561 - 3751292 - | 30S ribosomal protein S15 Spea_3058 3752630 - 3751683 - | tRNA pseudouridine synthase B Spea_3059 3753058 - 3752630 - | ribosome-binding factor A TERM 4284 3753109 - 3753084 - R 93 -11.1 -4.88407 | opp_overlap 3753085 3753088, overlap 3753085 3753088 CCATTCAATCAAAAA GTAAGGGCGGC TGAC GCCGCCCCTAT TGGTTATGAGATAGG TERM 4285 3753085 - 3753108 + r 90 -12.4 -3.45118 | opp_overlap 3753084 3753085 3753088, overlap 3753088 CATTCAATCAAAAAG TAAGGGCGGC TGAC GCCGCCCCTA TTGGTTATGAGATAG TERM 4286 3753108 - 3753085 - R 100 -14.6 -3.52321 | opp_overlap 3753085 3753088, overlap 3753084 3753088 CATTCAATCAAAAAG TAAGGGCGGC TGAC GCCGCCCCTA TTGGTTATGAGATAG TERM 4287 3753088 - 3753105 + r 93 -14.1 -2.57274 | opp_overlap 3753085 3753084 3753088, overlap 3753085 TCAATCAAAAAGTAA GGGCGGC TGAC GCCGCCC CTATTGGTTATGAGA TERM 4288 3753105 - 3753088 - R 100 -14.1 -3.88182 | opp_overlap 3753088 3753085, overlap 3753085 3753084 TCAATCAAAAAGTAA GGGCGGC TGAC GCCGCCC CTATTGGTTATGAGA Spea_3060 3755815 - 3753125 - | translation initiation factor IF-2 TERM 4289 3755060 - 3755078 + g 73 -8 -4.14392 | GTTCGCAGAAGGCTT GCGTGGAC GAC GGCCGCGC TTTTCAGCGTTAGCA TERM 4290 3755325 - 3755344 + g 85 -6.4 -5.19879 | overlap 3755314 3755326 TTAGCTGCTTTGTCT TCAGCAGT TTCA GCTGCTGG TTTTTCTGTTTGCAC Spea_3061 3757342 - 3755843 - | transcription elongation factor NusA Spea_3062 3757825 - 3757370 - | hypothetical protein TERM 4291 3757491 - 3757512 + g 75 -9.5 -3.53814 | gap 1, opp_overlap 3757491 3757488, overlap 3757487 3757495 GTGCCTTTTAAATTA CGACTGCCTG CAA CAGGCA-TCG TTAGTTGTACTTTTA TERM 4292 3757670 - 3757690 + g 70 -2.5 -4.9755 | overlap 3757660 3757670 3757674 3757678 GCGGCTTGCTTCGGC GCAATCTTC AAT GAAGATGCC TTTTTCGTTGTCTAT TERM 4293 3757863 - 3757850 - R 100 -5.9 -5.98675 | CAGAAAAACAAAAAA GGGCC TAAT AGCCC CAGTACACGCCACAA TERM 4294 3757929 - 3757914 - R 100 -6.8 -5.60689 | opp_overlap 3757914 CCAGATAACAAAAAA CCCCGT AATG ACGAGG TTGATATATCCAGAA Spea_3063 3758699 - 3758364 - | preprotein translocase subunit SecG Spea_3064 3759483 - 3758701 - | Triose-phosphate isomerase TERM 4295 3759245 - 3759265 + g 79 -8.3 -4.28432 | opp_overlap 3759250 TCACCAGTATAGGCT CCAAAGTCA TGT TGACTTAGG TTTTGAGTTCCCATT Spea_3065 3761017 - 3759680 - | phosphoglucosamine mutase Spea_3066 3761959 - 3761117 - | dihydropteroate synthase TERM 4296 3761841 - 3761824 - G 74 -11.3 -2.87527 | opp_overlap 3761823, overlap 3761823 GAGCCACCATTAAAT CGGCTTG TCTG CAAGCCG CTTGAATCGATGAAT TERM 4297 3761979 - 3762001 + r 100 -15 -3.87815 | opp_overlap 3761979 3761984, overlap 3761984 3762000 AAGTTCCGTAAACAA GAAAACCCCT AGA AGGGGTTTTC TTTATCAAACTAAAG TERM 4298 3762001 - 3761979 - R 100 -15 -3.91488 | opp_overlap 3761979 3761984 3762000, overlap 3761984 AAGTTCCGTAAACAA GAAAACCCCT AGA AGGGGTTTTC TTTATCAAACTAAAG TERM 4299 3761984 - 3761996 + r 90 -9.1 -4.99043 | opp_overlap 3761979 3761984, overlap 3761979 CCGTAAACAAGAAAA CCCCT AGA AGGGG TTTTCTTTATCAAAC TERM 4300 3761996 - 3761984 - R 90 -9.1 -5.00196 | opp_overlap 3761984 3761979, overlap 3761979 CCGTAAACAAGAAAA CCCCT AGA AGGGG TTTTCTTTATCAAAC Spea_3067 3763970 - 3762018 - | ATP-dependent metalloprotease FtsH TERM 4301 3762752 - 3762781 + g 71 -3.5 -4.89567 | gap 1, opp_overlap 3762752, overlap 3762753 CATCTTCCGACATCA CCATGGTGCGACGC TCT GCGCC-CATCATGA TTTTATCTTTTGCGC Spea_3068 3764660 - 3764031 - | 23S rRNA methyltransferase J Spea_3069 3764754 - 3765053 + | hypothetical protein TERM 4302 3765053 - 3765031 - T 74 -4.8 -4.67942 | opp_overlap 3765034 CTGAAGAAATGAAAA TTGCTGTGCC TAA GGCAAAGTAA TTAACAAAGATCTCT TERM 4303 3765131 - 3765108 - T 100 -16.8 -5.4659 | opp_overlap 3765108 TAAGATAAATAAAAA GAGCCGCTGT TTAT ACAGCGGCTC TTTTTTTGTCTGCTT TERM 4304 3765108 - 3765131 + T 100 -16.8 -5.75478 | opp_overlap 3765108 TAAGATAAATAAAAA GAGCCGCTGT TTAT ACAGCGGCTC TTTTTTTGTCTGCTT Spea_3070 3766054 - 3765146 - | protein-export membrane protein SecF Spea_3071 3767870 - 3766056 - | preprotein translocase subunit SecD TERM 4305 3767027 - 3767017 - G 78 -5.4 -4.85599 | TTCACCTGATAAAAA GCAA GGC TTGC AGTGGCGCCAATCAC Spea_3072 3768672 - 3768172 - | hypothetical protein TERM 4306 3768805 - 3768782 - R 83 -8.9 -4.08948 | opp_overlap 3768786, overlap 3768786 GAATTCCACAAATAA CAAAGCCGC AAAAAA GCGGCTTTA TTCATTTATCTGACC TERM 4307 3768801 - 3768786 - R 81 -7.5 -4.63048 | opp_overlap 3768786, overlap 3768782 TCCACAAATAACAAA GCCGC AAAAAA GCGGC TTTATTCATTTATCT TERM 4308 3768786 - 3768801 + r 78 -7.5 -4.4388 | opp_overlap 3768782 3768786 TCCACAAATAACAAA GCCGC AAAAAA GCGGC TTTATTCATTTATCT Spea_3073 3769303 - 3768827 - | transcription elongation factor GreA TERM 4309 3769550 - 3769573 + r 76 -4.7 -5.10461 | gap 1 ACTCAACCTTCAGCC TAGTTGCTAG AGATG CT-GCAACTA TTTTTATTGAATGCC TERM 4310 3769621 - 3769647 + r 100 -13.8 -4.20354 | opp_overlap 3769626, overlap 3769626 TAACGCCATACAATA AAAAAGGCCGCT TAA AGCGGCCTTTTA TTTTAAGCTTCGCTT TERM 4311 3769626 - 3769642 + r 100 -13.7 -5.10163 | opp_overlap 3769626, overlap 3769621 CCATACAATAAAAAA GGCCGCT TAA AGCGGCC TTTTATTTTAAGCTT TERM 4312 3769642 - 3769626 - R 100 -13.7 -5.60689 | opp_overlap 3769626 3769621 CCATACAATAAAAAA GGCCGCT TAA AGCGGCC TTTTATTTTAAGCTT Spea_3074 3772882 - 3769661 - | carbamoyl phosphate synthase large subunit TERM 4313 3771679 - 3771691 + g 72 -2.6 -4.9218 | TTTTACCCACTTCAA GTCC ACGAA GGGC TTTTTGTAGTGACTC TERM 4314 3771924 - 3771943 + g 79 -10 -3.69323 | TTGGCTGCAATCTTT GCAATCGG GAAA CCGGTTGC TTTCGATGCTAGTGC Spea_3075 3774056 - 3772911 - | carbamoyl phosphate synthase small subunit TERM 4315 3773614 - 3773633 + g 83 -10.8 -3.79787 | opp_overlap 3773613 TTAAGACCAGGGAAG GCTTTAGC TGCA GCTAAAGC TTTAGCTTCATCTAA TERM 4316 3774235 - 3774247 + r 85 -9.1 -4.24963 | opp_overlap 3774235 TTCAAGCAAAAAAAA CCGCT AAT AGCGG TTTTAAATAGTTATA TERM 4317 3774247 - 3774235 - R 100 -9.1 -5.95166 | opp_overlap 3774235 TTCAAGCAAAAAAAA CCGCT AAT AGCGG TTTTAAATAGTTATA Spea_3076 3775074 - 3774250 - | dihydrodipicolinate reductase TERM 4318 3775106 - 3775125 + r 86 -10.8 -3.90761 | opp_overlap 3775106 AAATGTCAAAAAAAA GCCTAAGT ATTA ACTTAGGC TTATTGTCTAACTTA TERM 4319 3775125 - 3775106 - R 100 -10.8 -5.82388 | opp_overlap 3775106 AAATGTCAAAAAAAA GCCTAAGT ATTA ACTTAGGC TTATTGTCTAACTTA TERM 4320 3775180 - 3775156 - R 73 -8.7 -3.74542 | opp_overlap 3775156 GATAATATCTAATAA TTCAACTTCGA ATA CCAAAGTTGAA TATGGTGGGATCGCA Spea_3077 3775755 - 3775138 - | peptidylprolyl isomerase FKBP-type TERM 4321 3775419 - 3775435 + g 70 -9.5 -2.97771 | overlap 3775418 3775421 AACCTGGCTTGTCAC CATTACC TTC GGTAATG ATTTCGTATTGTAGA Spea_3078 3776638 - 3775838 - | peptidase M48 Ste24p TERM 4322 3776731 - 3776714 - R 100 -10.5 -5.24796 | TTCAGATAATAAAAA GCCCCGC GATT GCGAGGC TTAAAAGTATATAAC Spea_3079 3777891 - 3776761 - | chaperone protein DnaJ TERM 4323 3777953 - 3777925 - R 100 -14 -3.91072 | gap 1 CTAAAGTTGCACAAA CGGGCGTTA-GAG TTTC CTCGTAACGCCCG CTACAATAATTTAGG Spea_3080 3779897 - 3777981 - | chaperone protein DnaK TERM 4324 3779421 - 3779435 + g 79 -10 -3.794 | AACTTCAAGACCTGC GATGCG ACC CGCATC TTTAGTCGCTTGACG TERM 4325 3779562 - 3779572 + g 72 -3.2 -4.91712 | TTCAGCTGAGATTTG TGGT GGA GCCA TTTTTCTGCCTTGAG Spea_3081 3780204 - 3781118 + | hypothetical protein TERM 4326 3781173 - 3781195 + T 100 -11.3 -5.42131 | opp_overlap 3781173 GACGGTTTTTATTAA GCCAGTTGG AACTC CCGACTGGC TTTTTTATGTACTTC TERM 4327 3781195 - 3781173 - T 73 -9.8 -3.14344 | opp_overlap 3781173 GACGGTTTTTATTAA GCCAGTTGGA ACT CCCGACTGGC TTTTTTATGTACTTC Spea_3082 3781897 - 3781169 - | integrase catalytic region TERM 4328 3782014 - 3782047 + r 80 -2.4 -5.64274 | overlap 3782015 ACTTTATGGTGCCTT TTACTTTGGCGAAC CAGAGC GTTCGGCTAAGTAC TTTTTTTCTAAATCG Spea_3083 3782397 - 3782014 - | transposase TERM 4329 3782489 - 3782441 - R 100 -17.8 -3.90318 | opp_overlap 3782446 3782456, overlap 3782446 3782456 TCAGGACGGGACAAA GTTAAGACTAAAAAAGCCGAAC CCTGT GTTCGGCTTTTTTAGTCTTATG AAAAAATATTCGGCT TERM 4330 3782484 - 3782446 - R 100 -22.1 -3.33265 | opp_overlap 3782446 3782456, overlap 3782441 3782456 ACGGGACAAAGTTAA GACTAAAAAAGCCGAAC CCTGT GTTCGGCTTTTTTAGTC TTATGAAAAAATATT TERM 4331 3782446 - 3782484 + r 100 -22.1 -3.30007 | opp_overlap 3782441 3782446 3782456, overlap 3782456 ACGGGACAAAGTTAA GACTAAAAAAGCCGAAC CCTGT GTTCGGCTTTTTTAGTC TTATGAAAAAATATT TERM 4332 3782456 - 3782474 + r 100 -10.3 -5.30189 | opp_overlap 3782446 3782441 3782456, overlap 3782446 GTTAAGACTAAAAAA GCCGAAC CCTGT GTTCGGC TTTTTTAGTCTTATG TERM 4333 3782474 - 3782456 - R 100 -10.3 -5.27779 | opp_overlap 3782456 3782446, overlap 3782446 3782441 GTTAAGACTAAAAAA GCCGAAC CCTGT GTTCGGC TTTTTTAGTCTTATG TERM 4334 3783002 - 3782974 - R 100 -13.4 -4.15854 | opp_overlap 3782982, overlap 3782982 3782990 AAAGGGAGCTGAAAA TAAAAAAACCGC ACAAG GCGGTTTTTTTA AATCGGCCTTCAAAC TERM 4335 3782994 - 3782982 - R 100 -6.2 -6.09196 | opp_overlap 3782982, overlap 3782974 3782990 CTGAAAATAAAAAAA CCGC ACAAG GCGG TTTTTTTAAATCGGC TERM 4336 3782982 - 3782994 + r 91 -6.2 -5.47218 | opp_overlap 3782974 3782982 3782990 CTGAAAATAAAAAAA CCGC ACAAG GCGG TTTTTTTAAATCGGC Spea_3084 3784287 - 3783022 - | gamma-glutamyl phosphate reductase Spea_3085 3785402 - 3784284 - | gamma-glutamyl kinase TERM 4337 3784934 - 3784903 - G 75 -6.6 -4.49531 | gap 1 AATAAAATCAATAAA TCTGCATCGCATAAC AGC GCTGCGCGA-GCAGA CAAATTATCATTGTC TERM 4338 3785620 - 3785636 + r 90 -12.3 -3.64703 | opp_overlap 3785620 GCTGAAAATAAAAAA GCCACAC TCG GTGTGGC TTTAAGTAAGCAGAG TERM 4339 3785636 - 3785620 - R 100 -12.3 -5.79595 | opp_overlap 3785620 GCTGAAAATAAAAAA GCCACAC TCG GTGTGGC TTTAAGTAAGCAGAG Spea_3086 3786960 - 3785671 - | xanthine/uracil/vitamin C permease TERM 4340 3785944 - 3785916 - G 73 -2.5 -5.09895 | gap 2, overlap 3785917 3785918 TAGCCACGTAAAAAA GTGTACCCGCCGT TGCGT AC-GCAGGTAC-C ATGCCGGCTAATGGC TERM 4341 3786104 - 3786083 - G 74 -10.9 -2.81133 | gap 1, opp_overlap 3786087 GACGTACCCAGCATA GCACCGGCGA TAG TCGC-GGTGC TGTCAGCCGTTAACG TERM 4342 3786957 - 3786977 + g 81 -3.9 -5.29716 | opp_overlap 3786960 3786965, overlap 3786961 TGAATAATTTTTCTA ACATGGAAC AAG GTTCCTTGG TTTTTATTATATTGA TERM 4343 3786961 - 3786973 + r 75 -7.7 -3.96481 | opp_overlap 3786960 3786965, overlap 3786957 TAATTTTTCTAACAT GGAAC AAG GTTCC TTGGTTTTTATTATA TERM 4344 3787716 - 3787750 + r 70 -9.4 -2.56203 | opp_overlap 3787717 3787720, overlap 3787715 3787714 TCATATCAAGGAGAA ATAAGCCGAACCTATT GCG AGTATGTTCGGCTTAC AGTTTTATAACTTAG TERM 4345 3787749 - 3787717 - R 88 -10.7 -4.09215 | opp_overlap 3787716 3787715 3787714, overlap 3787720 CATATCAAGGAGAAA TAAGCCGAACCTATT GCG AGTATGTTCGGCTTA CAGTTTTATAACTTA TERM 4346 3787746 - 3787720 - R 77 -8 -4.15832 | opp_overlap 3787716 3787715 3787714, overlap 3787717 ATCAAGGAGAAATAA GCCGAACCTATT GCG AGTATGTTCGGC TTACAGTTTTATAAC Spea_3087 3789579 - 3787762 - | ATP-dependent OLD family endonuclease TERM 4347 3789793 - 3789814 + r 100 -14.5 -3.53012 | opp_overlap 3789793 GATTGGTCGAATTTA TCCCCGTGA TACA TCACGGGGA TTTACGACGAACAGC TERM 4348 3789814 - 3789793 - R 93 -14.5 -2.52676 | opp_overlap 3789793 GATTGGTCGAATTTA TCCCCGTGA TACA TCACGGGGA TTTACGACGAACAGC TERM 4349 3789950 - 3789908 - R 71 -6.3 -4.20516 | gap 1, opp_overlap 3789918, overlap 3789918 GGTCTATCCAATAAA GGTCGGATAAGCGGCACTTG TTAC CAAGTGCCGCTC-TCCTAAG AACCGTACGTGCAAC TERM 4350 3789918 - 3789941 + r 100 -16.8 -2.78463 | opp_overlap 3789918 3789908 ATAAAGGTCGGATAA GCGGCACTTG TTAC CAAGTGCCGC TCTCCTAAGAACCGT TERM 4351 3789941 - 3789918 - R 100 -16.8 -3.32562 | opp_overlap 3789918, overlap 3789908 ATAAAGGTCGGATAA GCGGCACTTG TTAC CAAGTGCCGC TCTCCTAAGAACCGT TERM 4352 3790014 - 3790032 + r 76 -8.9 -3.62275 | CGTACTATGTTACCC GGTAACC ACAGG GGTTACC TTTGCAATACTCACT TERM 4353 3791064 - 3791091 + r 72 -8.4 -3.53012 | overlap 3791068 GTTGGAATAAATTGC GTGATGCCGACA TGGA TGTCGGCGTAGC TTTCGCGGGGCAGGA TERM 4354 3791068 - 3791087 + r 72 -10 -2.64155 | overlap 3791064 GAATAAATTGCGTGA TGCCGACA TGGA TGTCGGCG TAGCTTTCGCGGGGC TERM 4355 3791364 - 3791348 - R 100 -12.3 -6.15259 | CAAGGCAAAAAAAAA CCAGCTC AAA GAGCTGG CAAGACATGTTTCAA TERM 4356 3791451 - 3791425 - R 70 -8.8 -3.34895 | GCTAGCGTTAATCAA TGGCATATCGAC AAG GTCAACATACCA CTTGAGTCTAAACAC TERM 4357 3791478 - 3791466 - R 72 -9.1 -3.38224 | overlap 3791464 ACTTGAGTCTAAACA CACCC AAA GGGTG CTATAAGGTTGATGG Spea_3089 3791632 - 3791519 - | hypothetical protein TERM 4358 3792039 - 3792028 - R 72 -4.4 -4.68994 | ACCAGCATCCAAAAA TTGG CTTG CCAA AGTGCCCTGACAAGA TERM 4359 3792131 - 3792113 - R 100 -14.6 -6.02914 | TTTAGATAAAAAAAA GCCCACTC AAT GAGTGGGC AAGACATTTCAAGTG TERM 4360 3792589 - 3792571 - R 72 -9 -3.41051 | GTAGTTTTATTACAA GCTTTTTT ATT AAAAAAGC CAAAATAGACACTTT TERM 4361 3792688 - 3792715 + r 85 -12.8 -3.12351 | opp_overlap 3792693, overlap 3792693 TTCGATGATACAAAC AAAAACCAGCGC TAAG GCGCTGGTTTTA TTGGGTATGCAGACA TERM 4362 3792693 - 3792710 + r 100 -12.7 -4.70169 | opp_overlap 3792693, overlap 3792688 TGATACAAACAAAAA CCAGCGC TAAG GCGCTGG TTTTATTGGGTATGC TERM 4363 3792710 - 3792693 - R 100 -12.7 -5.42975 | opp_overlap 3792693 3792688 TGATACAAACAAAAA CCAGCGC TAAG GCGCTGG TTTTATTGGGTATGC Spea_3090 3794298 - 3792760 - | peptidase M17 leucyl aminopeptidase domain-containing protein TERM 4364 3794721 - 3794708 - g 77 -3.7 -5.1861 | CTGATCATCAAAAAA CCGGC AACT GCGGG TATGGAAGACCGTAA TERM 4365 3795151 - 3795133 - g 76 -7.4 -4.20516 | opp_overlap 3795132 TCCTGAGCCAACAAA CGCCAGTT ATA AACTGTCG CTCTCTGGGCTTAAA Spea_3091 3794531 - 3795991 + | aminoacyl-histidine dipeptidase TERM 4366 3796019 - 3796059 + T 85 -5.7 -5.24129 | gap 2, opp_overlap 3796023, overlap 3796023 TTCAAAGTAAAACCT AAAAGGCCACTTA--GCTA TTAAT TAGCAGTAAGTGGCCTTTG TTTTTTCTAACGAGC TERM 4367 3796023 - 3796055 + T 83 -6.5 -5.13354 | gap 2, opp_overlap 3796023, overlap 3796019 AAGTAAAACCTAAAA GGCCACTTA--GCTA TTAAT TAGCAGTAAGTGGCC TTTGTTTTTTCTAAC TERM 4368 3796055 - 3796023 - T 74 -6.5 -4.4518 | gap 2, opp_overlap 3796023 3796019 AAGTAAAACCTAAAA GGCCACTTA--GCTA TTAAT TAGCAGTAAGTGGCC TTTGTTTTTTCTAAC Spea_3092 3797168 - 3796092 - | DNA polymerase IV TERM 4369 3797405 - 3797394 - R 70 -5.8 -4.43272 | ACTTAAAAGTGAAAA GCCT AAAT AGGC CCTGAACTGGTCACA Spea_3093 3797663 - 3797424 - | hypothetical protein TERM 4370 3797871 - 3797890 + r 77 -7.8 -4.24326 | opp_overlap 3797871 AAATCGTAAAAAAAA GAGCCGCT ACAG AACGGCTC TTTTAAATCATGTTT TERM 4371 3797890 - 3797871 - R 100 -10 -5.82388 | opp_overlap 3797871 AAATCGTAAAAAAAA GAGCCGCT ACAG AACGGCTC TTTTAAATCATGTTT Spea_3094 3798380 - 3797913 - | bacterioferritin Spea_3095 3798860 - 3798393 - | bacterioferritin TERM 4372 3799170 - 3799153 - R 100 -11.3 -5.43487 | opp_overlap 3799153 AAATGATATAAAAAA GGCTCCT AAAA AGGAGCC TTAATTGCCGTAAGC TERM 4373 3799153 - 3799170 + r 85 -11.3 -3.35813 | opp_overlap 3799153 AAATGATATAAAAAA GGCTCCT AAAA AGGAGCC TTAATTGCCGTAAGC Spea_3096 3799416 - 3799195 - | hypothetical protein Spea_3097 3800445 - 3799429 - | ApbE family lipoprotein TERM 4374 3800396 - 3800364 - G 83 -10.8 -3.74077 | TGCCAGACAGTGAAA TCACTTCAGCTTGT TTAGT ACAAGCTGAAATAA AAAAGGCTAACCCGA TERM 4375 3800423 - 3800401 - G 100 -9.1 -5.64421 | AGCTGAAATAAAAAA GGCTAACCC GATAA GGGCCAGCC AGTTTACTAAGGTCT TERM 4376 3800489 - 3800502 + r 76 -6.7 -4.4261 | GTTAGCCACCGAAGT CATCC AACA GGATG TTTTCATCTTCGACA Spea_3098 3801722 - 3800475 - | Na(+)-translocating NADH-quinone reductase subunit F Spea_3099 3802378 - 3801770 - | Na(+)-translocating NADH-quinone reductase subunit E Spea_3100 3803016 - 3802384 - | Na(+)-translocating NADH-quinone reductase subunit D Spea_3101 3803810 - 3803016 - | Na(+)-translocating NADH-quinone reductase subunit C Spea_3102 3805002 - 3803803 - | Na(+)-translocating NADH-quinone reductase subunit B Spea_3103 3806336 - 3805002 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 4377 3806050 - 3806035 - G 76 -7.6 -4.29738 | opp_overlap 3806037 TCATATTTAGCAAAA GAGATG CTTT CATCTC CTTCCACTTCAATAA TERM 4378 3806952 - 3806939 - R 100 -9.5 -5.54885 | AATACTAATAAAAAA GCCGC TAAA GCGGC CTTAAAACGAGATTA Spea_3104 3807489 - 3806980 - | S-ribosylhomocysteinase TERM 4379 3807733 - 3807712 - R 100 -8.7 -5.65927 | opp_overlap 3807712 GACGGAAACAAAAAA GCCACAGCA ATAT TACCGTGGC TTTAATTAACACTAT Spea_3105 3808101 - 3807802 - | BolA family protein Spea_3106 3808930 - 3808223 - | 2OG-Fe(II) oxygenase TERM 4380 3808455 - 3808421 - G 85 -5.7 -5.28778 | overlap 3808422 ATGACGGATAAAAAA GTCTCGCGTCGCT CCAAGCGTC AGCGACGCGATAT CGCTAGCAGGCTCAA TERM 4381 3808454 - 3808422 - G 76 -9.2 -3.76182 | overlap 3808421 TGACGGATAAAAAAG TCTCGCGTCGCT CCAAGCGTC AGCGACGCGATA TCGCTAGCAGGCTCA Spea_3107 3809096 - 3810370 + | rRNA (guanine-N(2)-)-methyltransferase TERM 4382 3810416 - 3810445 + T 100 -13.7 -4.93547 | opp_overlap 3810421, overlap 3810421 TATAAGCGGTTAAGC AAAAACGGTGAGC CTAG GCTCACCGTTTTG TTTTTGATTCATTAA TERM 4383 3810421 - 3810440 + T 100 -13.6 -5.34655 | opp_overlap 3810421, overlap 3810416 GCGGTTAAGCAAAAA CGGTGAGC CTAG GCTCACCG TTTTGTTTTTGATTC TERM 4384 3810440 - 3810421 - T 100 -13.6 -4.8622 | opp_overlap 3810421 3810416 GCGGTTAAGCAAAAA CGGTGAGC CTAG GCTCACCG TTTTGTTTTTGATTC Spea_3108 3811415 - 3810468 - | fatty acid hydroxylase Spea_3109 3812587 - 3811523 - | hypothetical protein Spea_3110 3812826 - 3813431 + | hypothetical protein Spea_3111 3813481 - 3814140 + | peptidyl-prolyl cis-trans isomerase cyclophilin type Spea_3112 3814259 - 3814579 + | hypothetical protein TERM 4385 3814634 - 3814659 + F 100 -13.3 -4.72272 | opp_overlap 3814634 TCAAGCTCTAGCTAA GCCCAGACCAA AACT TCGGTCTGGGC TTTTTACTGGCAAGC TERM 4386 3814659 - 3814634 - f 100 -15.5 -3.06831 | opp_overlap 3814634 TCAAGCTCTAGCTAA GCCCAGACCAA AACT TCGGTCTGGGC TTTTTACTGGCAAGC Spea_3113 3815049 - 3816479 + | major facilitator transporter TERM 4387 3816612 - 3816587 - T 88 -11.2 -3.63627 | opp_overlap 3816589 3816607 3816609 TGCTGATATGGTAAA TAGCCGCCCA TCATCG TGAGCGGCTA ATTGAACCTATTGGC Spea_3114 3817201 - 3816716 - | nucleotide-binding protein TERM 4388 3817646 - 3817659 + G 79 -4.5 -5.14626 | overlap 3817647 TCATTGCCGATATGG TGGGG ATCT CCCTA TTTTATTTTACTCAT Spea_3115 3817303 - 3817731 + | VanZ family protein Spea_3116 3817738 - 3818769 + | 2-dehydropantoate 2-reductase TERM 4389 3819610 - 3819633 + G 79 -2.4 -5.47399 | overlap 3819612 TTTTAAATGCTAAAG TTTGGTCG GCGGCATA CGGCCAGA TTTTTTTCACCTTAA TERM 4390 3819807 - 3819850 + G 79 -8 -4.45083 | opp_overlap 3819807 ATGGCCCAGGAGCAA GCCAAGCCCATTACCGACGT GGTC ACGTCGGGTGTAGGTCTGGC TTTTGTCACTATACC Spea_3117 3818940 - 3820439 + | sodium:neurotransmitter symporter Spea_3118 3820639 - 3821346 + | phosphoesterase PA-phosphatase related Spea_3119 3822225 - 3821350 - | hypothetical protein TERM 4391 3822358 - 3822378 + r 75 -9.7 -3.42124 | opp_overlap 3822359, overlap 3822359 ACCGCCGCAAAAAAA AGCCAAGTC ATA GACTTGGCC TTCTCAGTGCTTTTC TERM 4392 3822377 - 3822359 - R 100 -13.2 -5.75342 | opp_overlap 3822358 3822359 CCGCCGCAAAAAAAA GCCAAGTC ATA GACTTGGC CTTCTCAGTGCTTTT TERM 4393 3822359 - 3822377 + r 90 -13.2 -2.64551 | opp_overlap 3822359, overlap 3822358 CCGCCGCAAAAAAAA GCCAAGTC ATA GACTTGGC CTTCTCAGTGCTTTT Spea_3120 3823972 - 3822410 - | AbgT putative transporter TERM 4394 3824119 - 3824150 + r 77 -6 -4.64676 | opp_overlap 3824121 3824126, overlap 3824121 3824126 TATATCGATGAAAAA AATAAAACCCTG CGCTAAGA CAGGGTTTTATC TTTTATTACAACTAG TERM 4395 3824121 - 3824148 + r 77 -8.6 -3.93768 | opp_overlap 3824121 3824126, overlap 3824119 3824126 TATCGATGAAAAAAA TAAAACCCTG CGCTAAGA CAGGGTTTTA TCTTTTATTACAACT TERM 4396 3824148 - 3824121 - R 100 -9.3 -5.53991 | opp_overlap 3824119 3824121 3824126, overlap 3824126 TATCGATGAAAAAAA TAAAACCCTGC GCTAAG ACAGGGTTTTA TCTTTTATTACAACT TERM 4397 3824143 - 3824126 - R 90 -4.8 -5.57888 | opp_overlap 3824121 3824119 3824126, overlap 3824121 ATGAAAAAAATAAAA CCCTGC GCTAAG ACAGGG TTTTATCTTTTATTA TERM 4398 3824126 - 3824143 + r 71 -4.1 -4.98103 | opp_overlap 3824126 3824121, overlap 3824121 3824119 ATGAAAAAAATAAAA CCCTG CGCTAAGA CAGGG TTTTATCTTTTATTA Spea_3121 3825038 - 3824190 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 4399 3824460 - 3824470 + g 74 -8.2 -3.98683 | opp_overlap 3824454 3824459 CGCATCGAAGATCAC CGGG TAA CCCG TTTGCTTCATCTCAT TERM 4400 3825059 - 3825080 + r 75 -10.1 -3.1706 | TCTTCTCTCTTCGTG AGCCAAGGC CGTT GCCTTGGCA TTAATCAACTAAGTT Spea_3122 3826376 - 3825108 - | hypothetical protein TERM 4401 3826556 - 3826586 + r 83 -12.6 -2.78018 | opp_overlap 3826557 3826564, overlap 3826562 3826564 ACACAAGCACTATCA ACACAAAAGGGCCT TAA AGGCCCTATTGTGA TACTTAATGGAAAGT TERM 4402 3826585 - 3826557 - R 100 -16.1 -3.25729 | opp_overlap 3826556 3826562 3826564, overlap 3826564 CACAAGCACTATCAA CACAAAAGGGCCT TAA AGGCCCTATTGTG ATACTTAATGGAAAG TERM 4403 3826562 - 3826580 + r 72 -8.8 -3.47941 | opp_overlap 3826557 3826564, overlap 3826556 3826564 GCACTATCAACACAA AAGGGCCT TAA AGGCCCTA TTGTGATACTTAATG TERM 4404 3826564 - 3826578 + r 85 -11.4 -3.30731 | opp_overlap 3826557 3826564, overlap 3826562 3826556 ACTATCAACACAAAA GGGCCT TAA AGGCCC TATTGTGATACTTAA TERM 4405 3826578 - 3826564 - R 95 -11.4 -4.71186 | opp_overlap 3826564 3826562 3826556, overlap 3826557 ACTATCAACACAAAA GGGCCT TAA AGGCCC TATTGTGATACTTAA Spea_3123 3827378 - 3826590 - | hypothetical protein Spea_3124 3827773 - 3827378 - | invasion gene expression up-regulator SirB TERM 4406 3827631 - 3827644 + g 76 -5.3 -4.80453 | TCGATAACGTGCGGC GCAAT TTTA ATTGC TTTCTTTTCTAATAC TERM 4407 3828010 - 3828039 + r 79 -10.9 -3.18912 | opp_overlap 3828016, overlap 3828016 CGTAATCGGGGCATA AAAAAAGGCATTC ACGA GAATGCCTTTTTC TTCATCAATCGATAA TERM 4408 3828033 - 3828016 - R 100 -9.9 -5.60993 | opp_overlap 3828016 3828010 CGGGGCATAAAAAAA GGCATTC ACGA GAATGCC TTTTTCTTCATCAAT TERM 4409 3828016 - 3828033 + r 93 -9.9 -5.14163 | opp_overlap 3828016, overlap 3828010 CGGGGCATAAAAAAA GGCATTC ACGA GAATGCC TTTTTCTTCATCAAT Spea_3125 3828901 - 3828059 - | HemK family modification methylase TERM 4410 3828841 - 3828815 - G 70 -10.3 -2.5661 | gap 1, overlap 3828812 3828817 TACATGAAGCAACAT GACCTCAGCATC CAGT GATGCTGAG-TC TGAAATACTTTCAAG Spea_3126 3830034 - 3828949 - | peptide chain release factor 1 TERM 4411 3829702 - 3829653 - G 74 -5.7 -4.60889 | opp_overlap 3829670 3829671, overlap 3829656 AATCACCCGCAAAAA TAGCCGCTTCATCACCACCCGCG CCAG CGCGGATTTCGATAAAACAGTTA TTGTCGTCATTCGGA Spea_3127 3831298 - 3830048 - | glutamyl-tRNA reductase TERM 4412 3831201 - 3831216 + g 72 -6.2 -4.36914 | CTAGCAGCTAGACTC TTCATG GCAT CATGAA TTTTATCAGGACCGA Spea_3128 3831568 - 3832227 + | outer membrane lipoprotein LolB Spea_3129 3832224 - 3833078 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Spea_3130 3833116 - 3834090 + | ribose-phosphate pyrophosphokinase TERM 4413 3834152 - 3834136 - T 100 -12.3 -5.53079 | opp_overlap 3834136 AAAAGAGAGAAAAAA CGCACTC CTT GAGTGCG TTTTTTTATGCCTAA TERM 4414 3834136 - 3834152 + T 100 -12.3 -5.64274 | opp_overlap 3834136 AAAAGAGAGAAAAAA CGCACTC CTT GAGTGCG TTTTTTTATGCCTAA Spea_3131 3834599 - 3834174 - | hypothetical protein Spea_3132 3835052 - 3834636 - | hypothetical protein TERM 4415 3835228 - 3835245 + r 95 -11.3 -4.83243 | opp_overlap 3835228 GCAGAAAACAAAAAA GCCCATC CGAA GATGGGC TTTCTTTTATATGGC TERM 4416 3835245 - 3835228 - R 100 -11.3 -5.86976 | opp_overlap 3835228 GCAGAAAACAAAAAA GCCCATC CGAA GATGGGC TTTCTTTTATATGGC TERM 4417 3835514 - 3835525 + r 76 -4.4 -5.055 | ACTCTATATTTTATA TCCT GAGT AGGA TTTTTTCCACATTCA TERM 4418 3837510 - 3837531 + r 90 -11.6 -4.07246 | opp_overlap 3837510 TCGCAGCTACAAAAA CGGCGACT ATAATA AGTCGCCG TTTGCTTTAACGTAC TERM 4419 3837531 - 3837510 - R 95 -11.6 -4.87665 | opp_overlap 3837510 TCGCAGCTACAAAAA CGGCGACT ATAATA AGTCGCCG TTTGCTTTAACGTAC Spea_3133 3838646 - 3837555 - | translation-associated GTPase TERM 4420 3838692 - 3838674 - R 71 -9.6 -2.87012 | opp_overlap 3838684, overlap 3838671 AATATCAATGAATGA CTTGAAGC TTT GCTCCAAG CACTTGTTTATGCTT Spea_3134 3839326 - 3838700 - | peptidyl-tRNA hydrolase TERM 4421 3839498 - 3839528 + r 79 -11.3 -2.64144 | opp_overlap 3839504, overlap 3839504 GCTTAGCCGTAACGA AAAAAACCGAGTG TTTTT CACTCGGTTTTTA ATCTTTAAATAGGCA TERM 4422 3839522 - 3839504 - R 100 -10.3 -5.63103 | opp_overlap 3839498 3839504 CCGTAACGAAAAAAA CCGAGTG TTTTT CACTCGG TTTTTAATCTTTAAA TERM 4423 3839504 - 3839522 + r 93 -10.3 -4.93696 | opp_overlap 3839504, overlap 3839498 CCGTAACGAAAAAAA CCGAGTG TTTTT CACTCGG TTTTTAATCTTTAAA Spea_3135 3840748 - 3839549 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Spea_3136 3841058 - 3841372 + | hypothetical protein Spea_3137 3841468 - 3842895 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 4424 3842949 - 3842928 - f 80 -10.1 -3.68261 | opp_overlap 3842929, overlap 3842929 TTATAACACGCGAAA GGCGGCATC CTGA GATGCCGCT TTTTTCTTCTTAGTT TERM 4425 3842929 - 3842948 + F 100 -13.6 -5.66229 | opp_overlap 3842928 3842929 TATAACACGCGAAAG GCGGCATC CTGA GATGCCGC TTTTTTCTTCTTAGT TERM 4426 3842948 - 3842929 - f 91 -13.6 -2.80474 | opp_overlap 3842929, overlap 3842928 TATAACACGCGAAAG GCGGCATC CTGA GATGCCGC TTTTTTCTTCTTAGT TERM 4427 3843416 - 3843395 - g 73 -10.1 -3.41309 | ATATATTAAGACTAA GCGTGGCGT GATT AAGCCACGC AATCCAAATCAGAGT Spea_3138 3843057 - 3844097 + | PhoH family protein TERM 4428 3844213 - 3844187 - g 89 -9.4 -4.57341 | AACTTTGGGTAAAAA CCGCACTCAGAG ATA CTATGAGTGAGG CAGAATTAACGATTC Spea_3139 3844090 - 3844560 + | putative metalloprotease Spea_3140 3844588 - 3845469 + | CBS domain-containing protein TERM 4429 3845544 - 3845590 + G 72 -10.2 -2.90194 | gap 2, opp_overlap 3845554 3845555, overlap 3845575 ATTAGCCCATCATCC GCGTTCGAAACTGGTGCTGGCC TACGC GGCCGGCGCCA-TTACG-GCGC TCTCCTTCGCCCCCT Spea_3141 3845509 - 3847044 + | apolipoprotein N-acyltransferase Spea_3142 3847716 - 3847216 - | hypothetical protein Spea_3143 3847810 - 3850416 + | leucyl-tRNA synthetase TERM 4430 3850471 - 3850513 + G 72 -10.7 -2.79492 | gap 2, overlap 3850503 TTAAACGCATACTTT TGGCAACCTTGGCACTGAGCG TAT TGCTCAGTGCC--GGTTGCGG CTTTAGACTTCAGGG Spea_3144 3850449 - 3850943 + | rare lipoprotein B TERM 4431 3851224 - 3851201 - g 75 -6.6 -4.4078 | overlap 3851203 CTTCCCCAAGCAAAA CCTGGCACCG ACGG CAGCGCCATG CTGCAAACGTTAATG Spea_3145 3850943 - 3851974 + | DNA polymerase III, delta subunit TERM 4432 3852093 - 3852064 - g 70 -10.8 -2.54193 | overlap 3852069 CAGCAGCTTAAGTTA GATGAGGTTTGG TTAATG CCAAACCACATC CCGCCCCATAAGCAA Spea_3146 3851974 - 3852624 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Spea_3147 3852723 - 3853052 + | iojap-like protein TERM 4433 3853417 - 3853397 - g 70 -2.4 -5.0538 | opp_overlap 3853397, overlap 3853410 CCTGAGTGCAAAAAA GCCGCAGC GCAAA GCTGGTGC TTATCAGCCTTAACC Spea_3148 3853052 - 3853522 + | SPOUT methyltransferase superfamily protein TERM 4434 3853913 - 3853903 - g 78 -5.4 -4.7416 | TGAAAAGGTCAAAAA TGTC AGC GACA CCTTAGATGAACTCA Spea_3149 3853607 - 3855463 + | peptidoglycan glycosyltransferase Spea_3150 3855460 - 3856566 + | rod shape-determining protein RodA Spea_3151 3856668 - 3857666 + | lytic murein transglycosylase B Spea_3152 3857653 - 3858435 + | rare lipoprotein A Spea_3153 3858541 - 3859713 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 4435 3859728 - 3859759 + F 93 -11.6 -4.5442 | opp_overlap 3859733 3859736, overlap 3859729 3859730 3859733 AGCCATACTCGGTAT ATCAAGAAGCCACC CTAG GGTGGCTTCTTGCG TTTTATACTTCAAAC TERM 4436 3859729 - 3859758 + F 100 -15.1 -3.3217 | opp_overlap 3859733 3859736, overlap 3859728 3859730 3859733 GCCATACTCGGTATA TCAAGAAGCCACC CTAG GGTGGCTTCTTGC GTTTTATACTTCAAA TERM 4437 3859730 - 3859757 + F 100 -18.6 -2.5882 | opp_overlap 3859733 3859736, overlap 3859729 3859728 3859733 CCATACTCGGTATAT CAAGAAGCCACC CTAG GGTGGCTTCTTG CGTTTTATACTTCAA TERM 4438 3859754 - 3859733 - f 95 -14.5 -3.2614 | opp_overlap 3859730 3859729 3859728 3859733, overlap 3859736 TACTCGGTATATCAA GAAGCCACC CTAG GGTGGCTTC TTGCGTTTTATACTT TERM 4439 3859733 - 3859754 + F 100 -14.5 -3.43261 | opp_overlap 3859733 3859736, overlap 3859730 3859729 3859728 TACTCGGTATATCAA GAAGCCACC CTAG GGTGGCTTC TTGCGTTTTATACTT TERM 4440 3859751 - 3859736 - f 80 -10.4 -3.7732 | opp_overlap 3859733 3859730 3859729 3859728, overlap 3859733 TCGGTATATCAAGAA GCCACC CTAG GGTGGC TTCTTGCGTTTTATA Spea_3154 3859846 - 3860112 + | hypothetical protein TERM 4441 3860127 - 3860156 + F 86 -10.3 -4.10657 | opp_overlap 3860120 3860127, overlap 3860134 AATATTAATCATTAA TGATAAATGTGAT CCGT ATTACATTTATCA TTTTGAAGCGTATAA Spea_3155 3860207 - 3860866 + | lipoate-protein ligase B Spea_3156 3860859 - 3861824 + | lipoyl synthase TERM 4442 3861885 - 3861852 - T 95 -14.1 -3.1855 | opp_overlap 3861854 3861860, overlap 3861854 3861860 GCGTTTAACACTGAA TATAAAAATAGCGCC TTTT GGCGCTATTTTTATT TGGATTCGACATCAA TERM 4443 3861883 - 3861854 - T 100 -16.7 -3.15503 | opp_overlap 3861854 3861860, overlap 3861852 3861860 GTTTAACACTGAATA TAAAAATAGCGCC TTTT GGCGCTATTTTTA TTTGGATTCGACATC TERM 4444 3861854 - 3861883 + T 100 -16.7 -3.75629 | opp_overlap 3861854 3861852 3861860, overlap 3861860 GTTTAACACTGAATA TAAAAATAGCGCC TTTT GGCGCTATTTTTA TTTGGATTCGACATC TERM 4445 3861860 - 3861877 + T 100 -11.3 -5.33026 | opp_overlap 3861854 3861852 3861860, overlap 3861854 CACTGAATATAAAAA TAGCGCC TTTT GGCGCTA TTTTTATTTGGATTC TERM 4446 3861877 - 3861860 - T 95 -11.3 -5.10767 | opp_overlap 3861860 3861854, overlap 3861854 3861852 CACTGAATATAAAAA TAGCGCC TTTT GGCGCTA TTTTTATTTGGATTC Spea_3157 3862357 - 3861920 - | ribosomal-protein-alanine acetyltransferase Spea_3158 3862704 - 3862357 - | hypothetical protein TERM 4447 3862878 - 3862847 - R 93 -13.8 -3.04691 | opp_overlap 3862848 3862854, overlap 3862854 CATAAATAGCAGATA CGAAAAAGCCGAGC TAAT GCTCGGCTTTCTCT AAATTTTGGCAGGGG TERM 4448 3862848 - 3862877 + r 95 -15.1 -2.74605 | opp_overlap 3862847 3862854, overlap 3862854 ATAAATAGCAGATAC GAAAAAGCCGAGC TAAT GCTCGGCTTTCTC TAAATTTTGGCAGGG TERM 4449 3862871 - 3862854 - R 100 -12.7 -4.85129 | opp_overlap 3862848 3862854, overlap 3862847 AGCAGATACGAAAAA GCCGAGC TAAT GCTCGGC TTTCTCTAAATTTTG TERM 4450 3862854 - 3862871 + r 93 -12.7 -4.12901 | opp_overlap 3862854 3862847, overlap 3862848 AGCAGATACGAAAAA GCCGAGC TAAT GCTCGGC TTTCTCTAAATTTTG TERM 4451 3863094 - 3863123 + r 91 -13.7 -2.90615 | opp_overlap 3863100, overlap 3863100 ATAAGCTACAGATGC AAAAAAGCCGAGC TAAT GCTCGGCTTTTTC TAATTTGGCAGGGGT TERM 4452 3863100 - 3863117 + r 100 -12.7 -5.04325 | opp_overlap 3863100, overlap 3863094 TACAGATGCAAAAAA GCCGAGC TAAT GCTCGGC TTTTTCTAATTTGGC TERM 4453 3863117 - 3863100 - R 100 -12.7 -5.14477 | opp_overlap 3863100 3863094 TACAGATGCAAAAAA GCCGAGC TAAT GCTCGGC TTTTTCTAATTTGGC Spea_3159 3864334 - 3863366 - | hydrolase (secreted protein) Spea_3160 3864976 - 3864623 - | hypothetical protein TERM 4454 3865676 - 3865692 + G 75 -2.9 -5.1356 | AAAGAAGATAATTAA GCGCAAA GAG TTAGTGC TTTTTCTTGCTCAAA Spea_3161 3865578 - 3866594 + | transposase IS116/IS110/IS902 family protein TERM 4455 3866995 - 3867017 + F 91 -12 -4.0174 | opp_overlap 3866995 CGTTAAACGAAAAAA TCCCCAACAC ATA GTGCTGGGGA TTTATCGCTTCTCTT TERM 4456 3867017 - 3866995 - f 100 -14.2 -5.37593 | opp_overlap 3866995 CGTTAAACGAAAAAA TCCCCAACAC ATA GTGCTGGGGA TTTATCGCTTCTCTT TERM 4457 3868403 - 3868414 + F 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 4458 3868909 - 3868925 + F 86 -9.4 -4.08546 | overlap 3868891 TTGGTCTTTCGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 4459 3869707 - 3869719 + F 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC Spea_3162 3872842 - 3873405 + | hypothetical protein TERM 4460 3873473 - 3873456 - T 100 -9.9 -5.32699 | opp_overlap 3873456 TTAAATATTAAAAAA CAGACTC TACG GAGTCTG TTTCATCAGCAAGAG TERM 4461 3873456 - 3873473 + T 79 -9.9 -3.72576 | opp_overlap 3873456 TTAAATATTAAAAAA CAGACTC TACG GAGTCTG TTTCATCAGCAAGAG Spea_3163 3873821 - 3873495 - | hypothetical protein TERM 4462 3874136 - 3874157 + r 83 -7.3 -4.6971 | opp_overlap 3874136 TTTTTATACAAAAAA GGCTTCAAC AAAT GTTGAAACC TTTTATTGAGCTTTA TERM 4463 3874157 - 3874136 - R 100 -9.5 -5.36441 | opp_overlap 3874136 TTTTTATACAAAAAA GGCTTCAAC AAAT GTTGAAACC TTTTATTGAGCTTTA Spea_3164 3876788 - 3874215 - | ATPase Spea_3165 3877760 - 3877014 - | hypothetical protein TERM 4464 3877098 - 3877080 - G 88 -6 -5.58454 | overlap 3877081 GCGATAGGAAAAAAA TGTTTCTG TGT CAGAAACT GTGCAGCGTGGATCG TERM 4465 3877097 - 3877081 - G 80 -9.5 -3.93988 | overlap 3877080 CGATAGGAAAAAAAT GTTTCTG TGT CAGAAAC TGTGCAGCGTGGATC TERM 4466 3877736 - 3877705 - G 93 -10.2 -4.63527 | opp_overlap 3877705 TCACGAGTCGAAAAA GCTAGGCTTACTCC AGAT GGAATAAACCAAGC TTGATGTTCATTATT Spea_3166 3878731 - 3877760 - | RluA family pseudouridine synthase Spea_3167 3878809 - 3879615 + | putative lipoprotein TERM 4467 3879645 - 3879669 + T 100 -13 -5.83226 | opp_overlap 3879645 3879649 ATGTTTTACAATAAA TAAAGGCCTC TTTTT GAGGCCTTTA TTTTTTTATTCAATT TERM 4468 3879669 - 3879645 - T 100 -13 -4.30987 | opp_overlap 3879645, overlap 3879649 ATGTTTTACAATAAA TAAAGGCCTC TTTTT GAGGCCTTTA TTTTTTTATTCAATT TERM 4469 3879665 - 3879649 - T 93 -9.4 -4.73677 | opp_overlap 3879645, overlap 3879645 TTTACAATAAATAAA GGCCTC TTTTT GAGGCC TTTATTTTTTTATTC Spea_3168 3881903 - 3879732 - | exporter of the RND superfamily protein-like protein TERM 4470 3882196 - 3882180 - R 70 -9.5 -2.62616 | opp_overlap 3882182, overlap 3882182 TCAGTCGGTAGAGCA GAGGATT GAA AATCCTC GTGTCCCTGGTTCGA TERM 4471 3882302 - 3882316 + r 100 -11.4 -5.76633 | opp_overlap 3882302 AATCGCTAAACTAAA CCTCGC ATC GCGAGG TTTTTTTATATCTGA TERM 4472 3882316 - 3882302 - R 90 -11.4 -4.06903 | opp_overlap 3882302 AATCGCTAAACTAAA CCTCGC ATC GCGAGG TTTTTTTATATCTGA TERM 4473 3882395 - 3882376 - R 93 -7.1 -5.38951 | opp_overlap 3882376 AATCCATATAAAAAA GCCCCGA GCTAAG TCGAGGC TTCTATTCAAAAAAA Spea_3169 3884279 - 3882417 - | methyl-accepting chemotaxis sensory transducer TERM 4474 3882979 - 3883003 + g 79 -4.3 -5.11613 | overlap 3882971 3882981 3883001 ACTGCAGCAGACTCA TTGATCTGTTG TGC CAATAGCTCGA TTTTTTCAATCGTCT Spea_3170 3884520 - 3885467 + | ornithine cyclodeaminase TERM 4475 3885532 - 3885512 - f 79 -6.9 -4.56597 | opp_overlap 3885512 TTTGCTGCCTAAAAA GAGAAGC GCATTAG GCTTCTC TTTCCTAATCATCTA Spea_3171 3885702 - 3886247 + | ECF subfamily RNA polymerase sigma-24 factor TERM 4476 3886322 - 3886295 - g 100 -15 -3.54676 | overlap 3886291 3886309 3886312 AGGCACCTAAAGCAA TCGTGCCACAAA AAGA TCTGTGGCACGA CATTGAGCGACAGCT Spea_3172 3886240 - 3886782 + | hypothetical protein Spea_3173 3886779 - 3887720 + | hypothetical protein Spea_3174 3888710 - 3887808 - | LysR family transcriptional regulator TERM 4477 3889776 - 3889756 - g 70 -4.7 -4.4009 | overlap 3889757 TGTCAGCCTAGAAAA GCACTATGA ACT TCATAGCGA TACAGGACCGAAACA TERM 4478 3890756 - 3890770 + G 79 -4.2 -5.22312 | opp_overlap 3890755, overlap 3890757 GAGAAATGTAATGAG CCCTTC CCT GAAGGC TTTTTTGATATCGAT Spea_3175 3889157 - 3894106 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 4479 3894185 - 3894205 + T 100 -14.1 -5.59879 | opp_overlap 3894185 AACAAGATGCAAAAA GGGCTCTTA AAT TAAGAGCCC TTTTTTATATTTATC TERM 4480 3894205 - 3894185 - T 100 -14.1 -4.77216 | opp_overlap 3894185 AACAAGATGCAAAAA GGGCTCTTA AAT TAAGAGCCC TTTTTTATATTTATC Spea_3176 3895068 - 3894376 - | pseudouridine synthase TERM 4481 3895326 - 3895316 - H 74 -4 -5.06451 | TACCACCCCAAAAAA CTTA ACA TAAG TAACTCAATGTAATT Spea_3177 3895472 - 3897556 + | endothelin-converting protein 1 TERM 4482 3897597 - 3897573 - f 80 -10.7 -3.34715 | overlap 3897571 CAGTTTTTTTAAAGA GCAGGCCCTAG GCT CTAGGAACTGC CAAGAAAGGTTCTAG TERM 4483 3897791 - 3897828 + F 82 -11.5 -3.25505 | opp_overlap 3897796, overlap 3897796 TTAAATTTAAAAGCT AAAAAGCCGTTGATG TCTCACTT CATCAACGGCTTTTC CTTTATTATCATTTT TERM 4484 3897823 - 3897796 - f 95 -11.4 -4.87318 | opp_overlap 3897791 3897796 TTTAAAAGCTAAAAA GCCGTTGATG TCTCACTT CATCAACGGC TTTTCCTTTATTATC TERM 4485 3897796 - 3897823 + F 95 -11.4 -4.70353 | opp_overlap 3897796, overlap 3897791 TTTAAAAGCTAAAAA GCCGTTGATG TCTCACTT CATCAACGGC TTTTCCTTTATTATC TERM 4486 3898060 - 3898049 - g 72 -3 -4.93316 | GAACAACAGCAAAAA TAAC GGTA GTTA CGCCGCCAAAAAAGC Spea_3178 3897948 - 3898733 + | hypothetical protein TERM 4487 3898780 - 3898759 - f 79 -8.7 -4.04141 | opp_overlap 3898759 3898762, overlap 3898762 TAATAATGAATGAAA GAACCCAGC ATAA GTTGGGTTC TTTGCTTTAAAAGCT TERM 4488 3898759 - 3898780 + F 88 -10.9 -4.06055 | opp_overlap 3898759 3898762, overlap 3898762 TAATAATGAATGAAA GAACCCAGC ATAA GTTGGGTTC TTTGCTTTAAAAGCT TERM 4489 3898762 - 3898777 + F 73 -6.8 -4.15396 | opp_overlap 3898762 3898759, overlap 3898759 TAATGAATGAAAGAA CCCAGC ATAA GTTGGG TTCTTTGCTTTAAAA Spea_3179 3899146 - 3899550 + | hypothetical protein Spea_3180 3899615 - 3900115 + | hypothetical protein TERM 4490 3900365 - 3900335 - T 74 -4 -5.14563 | opp_overlap 3900323 3900335 TTCTGCATTAAAAAA GCATCCATTCTATT ATT AAAATAGTGGATGC TTTTTTTATGCTTAA TERM 4491 3900335 - 3900365 + T 100 -6.2 -5.71983 | opp_overlap 3900335, overlap 3900323 TTCTGCATTAAAAAA GCATCCATTCTATT ATT AAAATAGTGGATGC TTTTTTTATGCTTAA Spea_3181 3901042 - 3900419 - | glutathione S-transferase domain-containing protein Spea_3182 3901284 - 3901820 + | membrane-flanked domain-containing protein TERM 4492 3902930 - 3902943 + G 70 -5.3 -4.41137 | TTAAAGGTGCTCTAC TTCCA TTGC TGGAA TTTGTTATGATTCTG TERM 4493 3903046 - 3903067 + G 71 -9.5 -3.21258 | overlap 3903041 GATAGGTATGGTAGC GCTATGAGA GTAC TCTCATGGC TTGGCTTAACTTACT Spea_3183 3901981 - 3903129 + | putative manganese transporter TERM 4494 3903808 - 3903763 - g 83 -9.1 -4.24384 | gap 1, overlap 3903758 3903770 AGCATTAAAACCAAA CATCC-AAGTTTGATCCTCGGC CAA GCCGAAGAGCAGACTCAAGATG CTGATGGCAAAAACC TERM 4495 3903800 - 3903770 - g 74 -10.4 -3.27153 | overlap 3903763 3903758 AAACCAAACATCCAA GTTTGATCCTCGGC CAA GCCGAAGAGCAGAC TCAAGATGCTGATGG TERM 4496 3904062 - 3904076 + G 72 -8.6 -3.6806 | opp_overlap 3904062 3904064 ACAGTTGCTCGAATA TAGCCA CAG TGGCTA TTTGCCTGGCTATGT Spea_3184 3903154 - 3904323 + | beta-lactamase Spea_3185 3904421 - 3904894 + | hypothetical protein TERM 4497 3904928 - 3904946 + F 100 -12.4 -5.75945 | opp_overlap 3904928 TGCAAGTGATTGAAA GCACTGCC AAT GGCGGTGC TTTTTTTTAGGAGCT TERM 4498 3904946 - 3904928 - f 80 -10.2 -3.68619 | opp_overlap 3904928 TGCAAGTGATTGAAA GCACTGCC AAT GGCGGTGC TTTTTTTTAGGAGCT TERM 4499 3905519 - 3905507 - f 73 -5.5 -4.57837 | overlap 3905493 ACAGTTTGCCAAAAA CCGCT CTG AGCAG ATAAAGTTCTTATAC TERM 4500 3905576 - 3905566 - f 74 -4 -5.06961 | ACTAACAAAAACAAA GAAA AGG TTTC CAATGGACGATAACA TERM 4501 3906036 - 3906015 - g 75 -2.9 -5.18355 | opp_overlap 3906032 GCCAAAAAGTAAAAA TCATCGTAG TGAC CGACGGTGA GCGCATCTTAGGTCT Spea_3186 3905579 - 3907267 + | malate dehydrogenase TERM 4502 3907311 - 3907341 + T 93 -8.5 -5.28315 | gap 1, opp_overlap 3907311 3907317, overlap 3907317 TTAGCGAAGTTGAAA CAAAA-AGCAGTCA TATT TGGCTGCTTTTTTG TTTTTTGGCTTTTGT TERM 4503 3907317 - 3907334 + T 100 -7.7 -6.04324 | opp_overlap 3907317 3907311, overlap 3907311 AAGTTGAAACAAAAA GCAGTCA TATT TGGCTGC TTTTTTGTTTTTTGG TERM 4504 3907334 - 3907317 - T 85 -5.5 -5.29846 | opp_overlap 3907311 3907317, overlap 3907311 AAGTTGAAACAAAAA GCAGTCA TATT TGGCTGC TTTTTTGTTTTTTGG Spea_3187 3908053 - 3907475 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Spea_3188 3910407 - 3908137 - | molybdopterin oxidoreductase TERM 4505 3908351 - 3908375 + g 100 -15.9 -3.32294 | overlap 3908341 TCTCCCACCTGACTA GTGATGGTGAT GCT ATCACCATCAC TTATCCCGAGTTTGG Spea_3189 3911226 - 3911023 - | hypothetical protein TERM 4506 3911121 - 3911148 + g 73 -11.4 -2.54371 | TCTTATCTTTGTATG CTCTCAAACCTA TAAA TTGGTTTGAGAG TACATTGCGGTGCTT TERM 4507 3911853 - 3911833 - R 81 -5.5 -5.13344 | ACACGAAGATAAAAA GTTGCTA TATCTGC TAGCAAC AAAAAAGGCTACAGA TERM 4508 3911860 - 3911880 + r 95 -11.2 -4.87893 | opp_overlap 3911860 GCTAGCAACAAAAAA GGCTACAG AAACC CTGTAGCC TTTTTGATTAAACTT TERM 4509 3911880 - 3911860 - R 100 -11.9 -5.5112 | opp_overlap 3911860 GCTAGCAACAAAAAA GGCTACAGA AAC CCTGTAGCC TTTTTGATTAAACTT Spea_3190 3912403 - 3911915 - | hypothetical protein Spea_3191 3912957 - 3912433 - | phosphoesterase PA-phosphatase related TERM 4510 3913132 - 3913119 - H 82 -3.9 -5.47159 | GCCGAATATAAAAAA TTTTG ATAC CAAAA ATAAACGTAAATGCC Spea_3192 3913143 - 3915026 + | diguanylate cyclase Spea_3193 3915263 - 3917146 + | diguanylate cyclase TERM 4511 3918410 - 3918392 - g 100 -8.8 -5.29445 | opp_overlap 3918392 CTTGAACAACAAAAA GCGCAGCC TGA AGCTACGC TGACTTATAACACTC Spea_3194 3917264 - 3918487 + | putative iron-sulfur cluster binding protein Spea_3195 3918766 - 3918554 - | hypothetical protein TERM 4512 3918680 - 3918695 + g 78 -5.4 -4.77157 | overlap 3918692 CTTCAATGATTCATT TGCCGT GGCT ATGGCA TTTTTAATGGCTTCA TERM 4513 3918805 - 3918780 - R 100 -14.9 -4.15006 | ATATTGACTCCAAAA CTGGTTAAGGT AATG ACCTTAACCAG TATAGAACAACATCT Spea_3196 3919433 - 3918930 - | alkylhydroperoxidase TERM 4514 3919180 - 3919168 - G 79 -10.5 -3.65046 | TTCTGAGTGTAATAA GGCGC TTC GCGCC AGATAGACAAGGACG TERM 4515 3919554 - 3919517 - H 88 -7.9 -5.09685 | gap 1, overlap 3919511 3919509 3919519 GAATACAGATAAAAA CT-GTTTTACCTTTGCGT AAA ACGCAAAGGTAAAGTTAG GACAATTCATGTTAA TERM 4516 3919551 - 3919519 - H 77 -10.7 -2.76884 | overlap 3919511 3919509 3919517 ATACAGATAAAAACT GTTTTACCTTTGCGT AAA ACGCAAAGGTAAAGT TAGGACAATTCATGT Spea_3197 3919563 - 3920456 + | LysR family transcriptional regulator TERM 4517 3920507 - 3920483 - T 93 -10 -4.90906 | opp_overlap 3920483, overlap 3920474 TTAGAACAGCAAAAA GCCGCATAAC TAAAT GATATGCGGC TTTTATTAGCCCTGG TERM 4518 3920483 - 3920507 + T 91 -10 -4.64676 | opp_overlap 3920474 3920483 TTAGAACAGCAAAAA GCCGCATAAC TAAAT GATATGCGGC TTTTATTAGCCCTGG Spea_3198 3921103 - 3920537 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Spea_3199 3921824 - 3921090 - | DSBA oxidoreductase TERM 4519 3921860 - 3921882 + r 72 -9.1 -3.30513 | overlap 3921862 CTTAAAATGTTCTCT TAGCGCTGC CAATA GCAGCGCTC TTAACTATTTCTTTA TERM 4520 3921862 - 3921880 + r 83 -11.7 -3.19874 | overlap 3921860 TAAAATGTTCTCTTA GCGCTGC CAATA GCAGCGC TCTTAACTATTTCTT Spea_3200 3924012 - 3921955 - | cytochrome c biogenesis protein transmembrane region Spea_3201 3924626 - 3924231 - | hypothetical protein TERM 4521 3924865 - 3924838 - R 100 -12.8 -5.03713 | opp_overlap 3924838 3924840 AACAAGCAAATAAAA CAACCAGCCGAT ATCA ATCGACTGGCTG TATCTCGTAATGGCA Spea_3202 3927181 - 3924911 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 4522 3925455 - 3925473 + g 71 -10.3 -2.7535 | overlap 3925452 GCTAGACCAATTTGG GTCGCGA TCTGC TCGCGAC TGATATCTTCACGGG Spea_3203 3927359 - 3928261 + | LysR family transcriptional regulator TERM 4523 3928305 - 3928277 - T 91 -13.3 -3.07816 | opp_overlap 3928277 3928283, overlap 3928283 GTCTGAGTTAGTTAA CAAAAAGCCTGCA TAC TGCAGGCTTTTTT GGTTTGCTATATTGG TERM 4524 3928277 - 3928306 + T 91 -13.1 -2.95475 | gap 1, opp_overlap 3928277 3928283, overlap 3928283 GTCTGAGTTAGTTAA C-AAAAAGCCTGCA TAC TGCAGGCTTTTTTG GTTTGCTATATTGGG TERM 4525 3928283 - 3928299 + T 100 -12.3 -5.40004 | opp_overlap 3928277 3928283, overlap 3928277 GTTAGTTAACAAAAA GCCTGCA TAC TGCAGGC TTTTTTGGTTTGCTA TERM 4526 3928299 - 3928283 - T 100 -12.3 -5.10461 | opp_overlap 3928283 3928277, overlap 3928277 GTTAGTTAACAAAAA GCCTGCA TAC TGCAGGC TTTTTTGGTTTGCTA Spea_3204 3929040 - 3928312 - | putative signal transduction protein TERM 4527 3929205 - 3929220 + r 81 -7.6 -4.57569 | opp_overlap 3929204 ATCAGTGTAAGAATT TGCTCT ACTC AGAGCA TTTTTGGCAAACTAA Spea_3205 3930231 - 3929626 - | GDSL family lipase TERM 4528 3930293 - 3930275 - R 100 -13.2 -5.5208 | opp_overlap 3930275 TTATAACATAAAAAA GCCAGACA CAA TGTCTGGC TTTCTTCCTATAACA TERM 4529 3930275 - 3930293 + r 100 -13.2 -4.29106 | opp_overlap 3930275 TTATAACATAAAAAA GCCAGACA CAA TGTCTGGC TTTCTTCCTATAACA Spea_3206 3932182 - 3930329 - | TonB-dependent receptor plug Spea_3207 3933408 - 3932761 - | hypothetical protein TERM 4530 3933655 - 3933613 - H 71 -7.4 -3.88559 | gap 1, opp_overlap 3933615, overlap 3933614 3933617 AATCACTTGCACAAA CTGATTACATTTGTAATCT TAATTG AAATTACAAACGTAATC-G AAGAGAAAGCAATGA Spea_3208 3933667 - 3934044 + | CopY family transcriptional regulator Spea_3209 3934041 - 3935234 + | TonB family protein TERM 4531 3935282 - 3935247 - T 95 -12.1 -4.36931 | opp_overlap 3935247 3935254 TAAGCTAGAGTAAAA GATGAAAGCTAGTAC TGATTG GTATTAGCTTTCATC TTTGTAGAGCTAGAT TERM 4532 3935247 - 3935282 + T 100 -15 -3.87994 | opp_overlap 3935247, overlap 3935254 TAAGCTAGAGTAAAA GATGAAAGCTAGTACT GATT GGTATTAGCTTTCATC TTTGTAGAGCTAGAT Spea_3210 3936117 - 3935332 - | hypothetical protein TERM 4533 3936551 - 3936579 + r 90 -13.3 -2.72204 | opp_overlap 3936556, overlap 3936556 CATGCAGTAAACACA AAAAAGCGAATGC ACG GCATTCGCTTTTC ATGTTTAAATTTTAG TERM 4534 3936556 - 3936574 + r 100 -13.2 -4.50358 | opp_overlap 3936556, overlap 3936551 AGTAAACACAAAAAA GCGAATGC ACG GCATTCGC TTTTCATGTTTAAAT TERM 4535 3936574 - 3936556 - R 100 -13.2 -5.5762 | opp_overlap 3936551 3936556 AGTAAACACAAAAAA GCGAATGC ACG GCATTCGC TTTTCATGTTTAAAT Spea_3211 3937130 - 3936609 - | NADPH-dependent FMN reductase Spea_3212 3937337 - 3938230 + | LysR family transcriptional regulator TERM 4536 3938209 - 3938240 + F 70 -9.5 -2.58491 | overlap 3938208 CTTTATCGATCTGGC TGCCGAACGGTTA GCTGGA TAGCCGTTCGACA ATGTTAATCTTTATG Spea_3213 3938389 - 3940557 + | extracellular solute-binding protein TERM 4537 3940604 - 3940640 + T 84 -10.4 -3.90048 | gap 1, opp_overlap 3940609, overlap 3940609 GATAATGAACTAACT AAAAAGCCCTTA-ATCG ATAT CGATATAAGGGCTTTTA TATTTTTAGCGGGAA TERM 4538 3940609 - 3940635 + T 93 -10.3 -4.98672 | gap 1, opp_overlap 3940609, overlap 3940604 TGAACTAACTAAAAA GCCCTTA-ATCG ATAT CGATATAAGGGC TTTTATATTTTTAGC TERM 4539 3940635 - 3940609 - T 93 -10.3 -4.93547 | gap 1, opp_overlap 3940609 3940604 TGAACTAACTAAAAA GCCCTTA-ATCG ATAT CGATATAAGGGC TTTTATATTTTTAGC Spea_3214 3941380 - 3940661 - | pseudouridine synthase Spea_3215 3941581 - 3942618 + | dihydroorotase TERM 4540 3942663 - 3942678 + F 90 -3.2 -5.93252 | opp_overlap 3942663 TGGTTAAGAGTAGAA GCCC CTTATTGC GGGC TTTTTTATTTTTGAA Spea_3216 3942888 - 3943232 + | hypothetical protein Spea_3217 3944105 - 3943326 - | hypothetical protein TERM 4541 3944324 - 3944286 - H 73 -10.4 -2.78266 | opp_overlap 3944295 3944313, overlap 3944288 3944295 AAGGGAGCAAGACGA CATCGAAAACAGAGACTA GCT TAGACTCCGTCTTCAACG GTATAATTGGGCATT TERM 4542 3944322 - 3944288 - H 72 -9.4 -2.93348 | opp_overlap 3944295 3944313, overlap 3944286 3944295 GGGAGCAAGACGACA TCGAAAACAGAGACTA GCT TAGACTCCGTCTTCAA CGGTATAATTGGGCA TERM 4543 3944315 - 3944295 - H 71 -6.1 -4.2535 | opp_overlap 3944295 3944313, overlap 3944288 3944286 AGACGACATCGAAAA CAGAGACTA GCT TAGACTCCG TCTTCAACGGTATAA Spea_3218 3944366 - 3944644 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 4544 3944641 - 3944626 - T 79 -9 -3.89346 | opp_overlap 3944637, overlap 3944640 TTGGCATGTTATAAA GGTCCT CTAC AGGACC TAGATGCTAGGACGC Spea_3219 3946013 - 3944934 - | glucose sorbosone dehydrogenase TERM 4545 3946425 - 3946400 - R 100 -12 -5.82172 | opp_overlap 3946400 ACCAAGATAAAAAAA CGCCCTATTA AATGAA TAATAGGGCG TTTTCGTGAACGTCG TERM 4546 3946400 - 3946425 + r 95 -12 -4.26076 | opp_overlap 3946400 ACCAAGATAAAAAAA CGCCCTATTA AATGAA TAATAGGGCG TTTTCGTGAACGTCG Spea_3220 3948450 - 3946456 - | hypothetical protein TERM 4547 3948293 - 3948316 + g 70 -8.8 -3.35996 | overlap 3948294 AAGAAGGACTTGTTA AGGTCATCGC GTAA GCGGTGACCA TTATGAATAGCAGTA TERM 4548 3948294 - 3948315 + g 78 -12.3 -2.61383 | overlap 3948293 AGAAGGACTTGTTAA GGTCATCGC GTAA GCGGTGACC ATTATGAATAGCAGT Spea_3221 3949453 - 3948434 - | glutathione synthetase Spea_3222 3949982 - 3950770 + | hypothetical protein Spea_3223 3951894 - 3950863 - | diguanylate cyclase TERM 4549 3951522 - 3951536 + g 83 -4.2 -5.41143 | overlap 3951524 AGATAATTCCCCCAT TAGCCA ACA TGGCCA TTTTTTTAGGGACTA TERM 4550 3951691 - 3951667 - G 74 -10.2 -3.23274 | overlap 3951662 TGGTCTATAACCCAA TATATTGCGA TTTAG TCGCAATATA CCAAAGACTTCAATG TERM 4551 3952067 - 3952048 - R 74 -9.3 -3.50045 | overlap 3952060 ACCTACAGAGTAGAA GCCAGAG TATAAG CTCTGGC AATAAAATGGTCTTT TERM 4552 3952152 - 3952135 - R 100 -8.4 -5.84381 | opp_overlap 3952135 TGACCAATAAAAAAA CGCAGC CTAATC GCTGCG TTTTTTTTCACTACC TERM 4553 3952135 - 3952152 + r 100 -8.4 -5.81412 | opp_overlap 3952135 TGACCAATAAAAAAA CGCAGC CTAATC GCTGCG TTTTTTTTCACTACC Spea_3224 3953280 - 3952171 - | putative outer membrane adhesin like proteiin Spea_3225 3954198 - 3953305 - | hypothetical protein Spea_3226 3954941 - 3954297 - | LVIVD repeat-containing protein Spea_3227 3955205 - 3956749 + | ferredoxin-dependent glutamate synthase TERM 4554 3956888 - 3956867 - T 79 -8.7 -4.01381 | opp_overlap 3956868, overlap 3956868 ACGGAATGTAAAGAA TCCACCTTC TGAA GAAGGTGGT TTAGGGCTAAAAATT TERM 4555 3956887 - 3956868 - T 82 -12.2 -3.00106 | opp_overlap 3956868, overlap 3956867 CGGAATGTAAAGAAT CCACCTTC TGAA GAAGGTGG TTTAGGGCTAAAAAT TERM 4556 3956868 - 3956887 + T 89 -12.2 -3.57263 | opp_overlap 3956868 3956867 CGGAATGTAAAGAAT CCACCTTC TGAA GAAGGTGG TTTAGGGCTAAAAAT Spea_3228 3957505 - 3956915 - | HAD family hydrolase Spea_3229 3960125 - 3957552 - | protein-P-II uridylyltransferase TERM 4557 3960490 - 3960457 - H 85 -12.7 -3.17194 | opp_overlap 3960464 ACCCGTTTAAGCGAA TAGAGTAGTCTGT GACTTAAA ACAGACTACTCTA AAGCCATAGCCAGCA Spea_3230 3960539 - 3960952 + | hypothetical protein Spea_3231 3961939 - 3960980 - | hypothetical protein Spea_3232 3963554 - 3962085 - | beta-lactamase domain-containing protein TERM 4558 3962607 - 3962595 - G 71 -7.7 -3.85817 | AGTGGTGTCGATAAA GTCCA CAT TGGAC AGTAGAGGGTGCTTG Spea_3233 3965004 - 3963814 - | hypothetical protein TERM 4559 3965154 - 3965169 + H 80 -6.2 -4.82998 | ATACTAATTTAGGGA TACCTA CAAG TAGGTA TTTATTTTGATTTCC Spea_3234 3965497 - 3965745 + | hypothetical protein TERM 4560 3965804 - 3965775 - T 72 -3.5 -5.03314 | opp_overlap 3965782, overlap 3965782 TTTATCGCCAAAAAA GCAGAAAGGGAGC CGAA GCTCCCTTTTTTA ATATATCAACGTCAT TERM 4561 3965782 - 3965797 + T 100 -10.4 -5.24989 | opp_overlap 3965782 3965775 CCAAAAAAGCAGAAA GGGAGC CGAA GCTCCC TTTTTTAATATATCA TERM 4562 3965797 - 3965782 - T 90 -10.4 -4.3179 | opp_overlap 3965782, overlap 3965775 CCAAAAAAGCAGAAA GGGAGC CGAA GCTCCC TTTTTTAATATATCA Spea_3235 3967702 - 3965819 - | curlin-associated protein Spea_3236 3968235 - 3969122 + | band 7 protein TERM 4563 3969179 - 3969148 - f 100 -17.6 -4.30014 | opp_overlap 3969151 3969155, overlap 3969155 TTCATCAACGTAAAA CAATAAATGGAACC TAAG GGTTCCATTTATTG TATGAGCCCTGCAGA TERM 4564 3969151 - 3969176 + F 95 -13.5 -3.48924 | opp_overlap 3969148 3969155, overlap 3969155 ATCAACGTAAAACAA TAAATGGAACC TAAG GGTTCCATTTA TTGTATGAGCCCTGC TERM 4565 3969155 - 3969172 + F 90 -9.9 -4.38927 | opp_overlap 3969148 3969155, overlap 3969151 ACGTAAAACAATAAA TGGAACC TAAG GGTTCCA TTTATTGTATGAGCC TERM 4566 3969172 - 3969155 - f 93 -9.9 -4.68601 | opp_overlap 3969155 3969151, overlap 3969148 ACGTAAAACAATAAA TGGAACC TAAG GGTTCCA TTTATTGTATGAGCC Spea_3237 3969372 - 3971117 + | hypothetical protein TERM 4567 3971146 - 3971174 + F 95 -13.2 -3.66274 | opp_overlap 3971152, overlap 3971148 3971152 CTACGACTCTCACTT TCCAAAGCCCGC CTATT GCGGGCTTTGTA TTATGTCTAATTGTT TERM 4568 3971148 - 3971172 + F 100 -15.8 -3.39727 | opp_overlap 3971152, overlap 3971146 3971152 ACGACTCTCACTTTC CAAAGCCCGC CTATT GCGGGCTTTG TATTATGTCTAATTG TERM 4569 3971168 - 3971152 - f 82 -10.8 -3.55444 | opp_overlap 3971148 3971146 3971152 CTCTCACTTTCCAAA GCCCGC CTATT GCGGGC TTTGTATTATGTCTA TERM 4570 3971152 - 3971168 + F 91 -10.8 -4.3277 | opp_overlap 3971152, overlap 3971148 3971146 CTCTCACTTTCCAAA GCCCGC CTATT GCGGGC TTTGTATTATGTCTA Spea_3238 3971380 - 3972459 + | PepSY-associated TM helix domain-containing protein TERM 4571 3972473 - 3972492 + F 100 -12.2 -5.59357 | opp_overlap 3972473 AATCTTCACTAAAAA TAGCAGCC ATTA GGCTGCTA TTTTTTTAATCTAAT TERM 4572 3972492 - 3972473 - f 100 -12.2 -4.73388 | opp_overlap 3972473 AATCTTCACTAAAAA TAGCAGCC ATTA GGCTGCTA TTTTTTTAATCTAAT Spea_3239 3972694 - 3974772 + | endothelin-converting protein 1 TERM 4573 3974803 - 3974826 + F 100 -15.4 -5.69793 | opp_overlap 3974803 GGCCTAACCTTAAAA TGCCAGTCAG TTCT CTGACTGGCA TTTTTTATTTCGTAT TERM 4574 3974826 - 3974803 - f 100 -15.4 -4.19238 | opp_overlap 3974803 GGCCTAACCTTAAAA TGCCAGTCAG TTCT CTGACTGGCA TTTTTTATTTCGTAT Spea_3240 3975003 - 3975860 + | putative glutathione S-transferase YghU TERM 4575 3975907 - 3975882 - T 81 -6.8 -4.76423 | opp_overlap 3975882, overlap 3975877 CACAAATACAGAAAA GGCGCTAAGT GAGCAT ACCAAGCGCC TTTTGAATAACAATA Spea_3241 3976420 - 3975935 - | hypothetical protein TERM 4576 3976410 - 3976430 + g 72 -4.7 -4.71222 | overlap 3976393 3976414 TGAATAAAGTGTTCA GCTGTTTGC ATT GCAAATACC TTTTAATTTTAATCT TERM 4577 3976615 - 3976593 - R 100 -10.6 -5.252 | opp_overlap 3976593 TACTGCCATAAAAAA GCCCAAACTA ATC CAGCTTGGGC TTCAATAGTGATCAT Spea_3242 3976892 - 3976644 - | hypothetical protein Spea_3243 3977193 - 3978557 + | guanine deaminase TERM 4578 3978595 - 3978630 + T 100 -13.5 -4.59993 | opp_overlap 3978600, overlap 3978600 TTGACTAGTCATATA AAAAAGGCTCAGAAG ATCATC CTTCTGAGCCTTTTA TTTGTTTATCACTTT TERM 4579 3978625 - 3978600 - T 100 -14.1 -5.38047 | opp_overlap 3978595 3978600 TAGTCATATAAAAAA GGCTCAGAAGA TCAT CCTTCTGAGCC TTTTATTTGTTTATC TERM 4580 3978600 - 3978625 + T 100 -13.4 -5.22481 | opp_overlap 3978600, overlap 3978595 TAGTCATATAAAAAA GGCTCAGAAG ATCATC CTTCTGAGCC TTTTATTTGTTTATC Spea_3244 3980059 - 3978674 - | xanthine/uracil/vitamin C permease TERM 4581 3979741 - 3979725 - G 82 -2.9 -5.55698 | GAGAAGGCAAAAAAA GCATTGA GTC CCATTGC TGGCGCGAGTGCGAT Spea_3245 3980467 - 3981219 + | SpoOM family protein TERM 4582 3981274 - 3981300 + T 100 -19.6 -4.72846 | opp_overlap 3981274 AAACAACATAAAAAA GTGCCGATAAGC CAT GCTTATCGGCAC TTTTTAAATCTGTCC TERM 4583 3981300 - 3981274 - T 100 -19.6 -5.57729 | opp_overlap 3981274 AAACAACATAAAAAA GTGCCGATAAGC CAT GCTTATCGGCAC TTTTTAAATCTGTCC Spea_3246 3982539 - 3981385 - | mandelate racemase/muconate lactonizing protein TERM 4584 3982567 - 3982598 + r 76 -4.4 -5.02476 | gap 1, opp_overlap 3982569, overlap 3982573 3982576 CAACTTTTGCTAATT CAGCTT-GAGCAGGC TCA GCCTGTTCTGCGTTG TTTTTTGCAGCCTGT Spea_3247 3984142 - 3982544 - | BCCT transporter TERM 4585 3982573 - 3982591 + g 74 -11 -2.83192 | opp_overlap 3982569, overlap 3982567 3982576 TTGCTAATTCAGCTT GAGCAGGC TCA GCCTGTTC TGCGTTGTTTTTTGC TERM 4586 3982576 - 3982588 + g 72 -9.1 -3.52449 | opp_overlap 3982569, overlap 3982573 3982567 CTAATTCAGCTTGAG CAGGC TCA GCCTG TTCTGCGTTGTTTTT Spea_3248 3985596 - 3984241 - | FAD dependent oxidoreductase TERM 4587 3984334 - 3984354 + g 78 -12.5 -2.71681 | GATAGCTTGTATAGC GGCAACGCC TGC GGCGTGGCC TAATTCGAAACATTG Spea_3249 3985774 - 3986421 + | GntR family transcriptional regulator TERM 4588 3986491 - 3986468 - T 75 -8.1 -4.0031 | opp_overlap 3986469, overlap 3986469 AGTGGTATTAAATAA GGTGGAGCC GCCACT GGCTCCACT TTGTTAACTAGTGAC TERM 4589 3986469 - 3986490 + T 100 -12.3 -4.21974 | opp_overlap 3986468 3986469 GTGGTATTAAATAAG GTGGAGCCG CCAC TGGCTCCAC TTTGTTAACTAGTGA TERM 4590 3986490 - 3986469 - T 81 -11.6 -2.99704 | opp_overlap 3986469, overlap 3986468 GTGGTATTAAATAAG GTGGAGCC GCCACT GGCTCCAC TTTGTTAACTAGTGA TERM 4591 3986666 - 3986647 - T 85 -9.3 -4.31085 | opp_overlap 3986647 TAGAGTAACTTAAAA GCCAGCA TCTTAT TGCTGGC TTTTTGTTGAGATAA TERM 4592 3986647 - 3986666 + T 90 -9.3 -5.08601 | opp_overlap 3986647 TAGAGTAACTTAAAA GCCAGCA TCTTAT TGCTGGC TTTTTGTTGAGATAA Spea_3250 3987394 - 3986699 - | CG2839 Spea_3251 3987774 - 3988997 + | sodium/glutamate symporter TERM 4593 3989028 - 3989058 + T 83 -12.7 -2.79117 | opp_overlap 3989034, overlap 3989034 AGCATTCATAGCCGT AAAAAAGCCAGCG ATTAA CGCTGGCTTTTTA GTCTTTGCTTTATAA TERM 4594 3989052 - 3989034 - T 100 -11.7 -5.04385 | opp_overlap 3989034 3989028 CATAGCCGTAAAAAA GCCAGCG ATTAA CGCTGGC TTTTTAGTCTTTGCT TERM 4595 3989034 - 3989052 + T 100 -11.7 -4.946 | opp_overlap 3989034, overlap 3989028 CATAGCCGTAAAAAA GCCAGCG ATTAA CGCTGGC TTTTTAGTCTTTGCT Spea_3252 3990227 - 3989316 - | hypothetical protein TERM 4596 3990347 - 3990320 - R 100 -9.2 -5.61881 | opp_overlap 3990320 CGCTAAAAACAAAAA TAGCAACCCCGT ATCA ATGGGATTGCTA TTAATAATCTAACGC TERM 4597 3990320 - 3990347 + r 70 -9.2 -3.24747 | opp_overlap 3990320 CGCTAAAAACAAAAA TAGCAACCCCGT ATCA ATGGGATTGCTA TTAATAATCTAACGC TERM 4598 3990478 - 3990447 - R 95 -6 -5.68438 | gap 1, opp_overlap 3990447 GTAGCAAACAAAAAA GCGAAC-CTTTAG AGCAGTG CCAAAGAGTTCGC TTTTGACGGCTAGCT Spea_3253 3992706 - 3990520 - | hypothetical protein Spea_3254 3993156 - 3992926 - | hypothetical protein Spea_3255 3994522 - 3993335 - | ankyrin TERM 4599 3993677 - 3993689 + g 72 -9.1 -3.60296 | CAGCAACTGCATTTT CGGCA ACA TGCCG TTTAAGCTGGCAATA Spea_3256 3995138 - 3994737 - | hypothetical protein TERM 4600 3995268 - 3995291 + r 100 -13.2 -5.27923 | opp_overlap 3995270 TGACGGTTTTTACTA GACCAGTAGC TTCT GCTGCTGGTC TTTTTTATGCACTTG Spea_3257 3996017 - 3995265 - | integrase catalytic region TERM 4601 3995374 - 3995363 - G 72 -3 -4.9792 | CATTGTATATAAAAA TTGA CTCC TCAA CGAGTTGCTTTAACT TERM 4602 3995761 - 3995748 - G 72 -6.7 -4.28111 | opp_overlap 3995747 TATATCACTAACAAA CACCT CTTC AGGTG CTGTTGGCACTAACT Spea_3258 3996499 - 3996101 - | transposase TERM 4603 3996534 - 3996506 - R 86 -9.8 -3.97947 | gap 1, opp_overlap 3996514 TGTAGTCATTATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACACTGAAAATA TERM 4604 3996550 - 3996574 + r 77 -8.6 -3.80083 | opp_overlap 3996555, overlap 3996555 AAGACACTGAAAATA AAAAAGGCCC GTAAA GGGCCTTTTC TTTGGGTTAACTTTT TERM 4605 3996555 - 3996569 + r 90 -8.5 -4.94058 | opp_overlap 3996555, overlap 3996550 ACTGAAAATAAAAAA GGCCC GTAAA GGGCC TTTTCTTTGGGTTAA TERM 4606 3996569 - 3996555 - R 100 -8.5 -5.80951 | opp_overlap 3996555 3996550 ACTGAAAATAAAAAA GGCCC GTAAA GGGCC TTTTCTTTGGGTTAA Spea_3259 3998196 - 3996613 - | Na+/H+ antiporter NhaC Spea_3260 3998909 - 3999097 + | hypothetical protein TERM 4607 3999157 - 3999140 - f 73 -7 -4.21194 | opp_overlap 3999140 GGTGATCATCTAAAA TAGGCC GAATTA GGCCTA TTCTGCTTATTTTTG Spea_3261 3999616 - 3999825 + | cold-shock DNA-binding domain-containing protein TERM 4608 3999836 - 3999867 + F 100 -17.6 -3.57144 | opp_overlap 3999845, overlap 3999845 TGTAACTTCGTAAGT TGACGTAAATGGTT TTAT AACCATTTACGTCA TTTCAAACTAACGCC TERM 4609 4000060 - 4000072 + F 74 -4.9 -4.68994 | AATAAAGACTAATTT TAAGT TTT ACTTA TTTTTACGTCATCAT Spea_3262 4000195 - 4000404 + | hypothetical protein TERM 4610 4000718 - 4000705 - T 93 -9.5 -4.98531 | GGCTTAAAGTAAAAA GGCCC CGAA GGGCC TTGGCATGTGCGTTA Spea_3263 4002826 - 4000859 - | hypothetical protein Spea_3264 4005233 - 4004145 - | hypothetical protein TERM 4611 4005670 - 4005652 - R 77 -6 -4.5787 | opp_overlap 4005666, overlap 4005654 TTATTAAAAAAAATA TAGCCTAA ACC TTAGGCTT GCAGTCTCTCTACAG TERM 4612 4005668 - 4005654 - R 77 -8.6 -3.87345 | opp_overlap 4005666, overlap 4005652 ATTAAAAAAAATATA GCCTAA ACC TTAGGC TTGCAGTCTCTCTAC TERM 4613 4006083 - 4006044 - R 75 -10.2 -2.96141 | overlap 4006036 4006043 GGTAATACAAAAGAG GCTGTTGAATTCGATAGC CTGC ACTACCGAATTCAACAAA AGATACTGATTAGCT Spea_3266 4007728 - 4006097 - | methyl-accepting chemotaxis sensory transducer TERM 4614 4007202 - 4007228 + g 73 -9.5 -3.4052 | GCAGCGGCATTTTTA GCAGCAAGC ACTTTTTCG GCTTGCTGC TTCATTAGCTTGAAA Spea_3267 4009160 - 4008015 - | diguanylate cyclase TERM 4615 4009601 - 4009543 - R 83 -12.8 -2.55267 | gap 1, opp_overlap 4009550 4009553 4009559, overlap 4009550 4009553 AAAGATGGGAATCGA CCACAAAGAACACGAAGAAAGGCAACT TCGAGC AGTTTCTTTTCTTCGTGTCCTCTGT-G TAGCAAACGAAGTGA TERM 4616 4009550 - 4009595 + r 84 -12.8 -2.98823 | opp_overlap 4009543 4009550 4009553, overlap 4009553 4009559 GGAATCGACCACAAA GAACACGAAGAAAGGCAACT TCGAGC AGTTTCTTTTCTTCGTGTCC TCTGTGTAGCAAACG TERM 4617 4009595 - 4009550 - R 93 -12.8 -3.99405 | opp_overlap 4009550 4009553 4009559, overlap 4009543 4009553 GGAATCGACCACAAA GAACACGAAGAAAGGCAACT TCGAGC AGTTTCTTTTCTTCGTGTCC TCTGTGTAGCAAACG TERM 4618 4009553 - 4009592 + r 90 -13.1 -2.72799 | opp_overlap 4009550 4009543 4009553, overlap 4009550 4009559 ATCGACCACAAAGAA CACGAAGAAAGGCAACT TCGAGC AGTTTCTTTTCTTCGTG TCCTCTGTGTAGCAA TERM 4619 4009592 - 4009553 - R 88 -10.9 -4.11585 | opp_overlap 4009553 4009550 4009559, overlap 4009550 4009543 ATCGACCACAAAGAA CACGAAGAAAGGCAACT TCGAGC AGTTTCTTTTCTTCGTG TCCTCTGTGTAGCAA TERM 4620 4009673 - 4009644 - R 88 -10.8 -4.10657 | opp_overlap 4009644 4009648, overlap 4009648 TTATAGCTTTTAAAA CAAAGAGCCCTG TCTGTG CAGGGTTCTTTG TTTCTTGTTTATTAA TERM 4621 4009644 - 4009673 + r 100 -13.7 -4.67968 | opp_overlap 4009644 4009648, overlap 4009648 TTATAGCTTTTAAAA CAAAGAGCCCTGT CTGT GCAGGGTTCTTTG TTTCTTGTTTATTAA TERM 4622 4009648 - 4009669 + r 88 -8.7 -4.82212 | opp_overlap 4009644 4009648, overlap 4009644 AGCTTTTAAAACAAA GAGCCCTGT CTGT GCAGGGTTC TTTGTTTCTTGTTTA TERM 4623 4009669 - 4009648 - R 73 -5.8 -4.65263 | opp_overlap 4009648 4009644, overlap 4009644 AGCTTTTAAAACAAA GAGCCCTG TCTGTG CAGGGTTC TTTGTTTCTTGTTTA TERM 4624 4009722 - 4009692 - R 81 -6.8 -4.72272 | CTTGTTTATTAAAAA CTAACCCTTAGCTC TAC GAGCAAAGCGGTAG CGAATACTGTCACTC Spea_3268 4010615 - 4009692 - | BAX protein TERM 4625 4010770 - 4010755 - R 100 -8.2 -5.80003 | opp_overlap 4010755 TCAACAAACAAAAAA GGCCGC AATT GCGACC TTTTAGCGGGTAGAA Spea_3269 4011078 - 4010800 - | hypothetical protein TERM 4626 4011597 - 4011581 - g 70 -9.5 -3.06815 | ATGCGGCTCAACACA TAAAGCC ATT GGCTTTA CACGACTAAAAAATA TERM 4627 4011729 - 4011711 - g 76 -7.5 -4.36411 | CAGCAAGTATTAAAA GTAGGAT TCAAC ATCCTAC AGCTAGATGAAATCT Spea_3270 4011330 - 4011917 + | GCN5-related N-acetyltransferase TERM 4628 4012057 - 4012067 + F 88 -4 -5.72207 | AGCCCGCCGCGGCAC CTTA TCC TAAG TTTTTTTGCTTTACA Spea_3271 4012150 - 4013388 + | manganese transporter NRAMP TERM 4629 4013454 - 4013478 + F 85 -11.4 -3.3573 | opp_overlap 4013450 GAGGCAATTCATTCC GGCGCGGG ACTATCTAA CCCGCGCC TTATCGACTAATTTA Spea_3272 4013808 - 4015235 + | citrate transporter TERM 4630 4015249 - 4015307 + T 74 -4.7 -4.8384 | gap 1, opp_overlap 4015265 4015269, overlap 4015261 4015262 4015269 AAGCGTTTCTTTTAA TTAA-CAGTGCTAACAATAAAGCTCGGC CTAG GCCGAGCTTTATTGATTTCACCATTTAG TTTTTCCCTTCTTTA TERM 4631 4015261 - 4015294 + T 100 -16.9 -3.65084 | opp_overlap 4015265 4015269, overlap 4015249 4015262 4015269 TAATTAACAGTGCTA ACAATAAAGCTCGGC CTAG GCCGAGCTTTATTGA TTTCACCATTTAGTT TERM 4632 4015262 - 4015293 + T 100 -20.4 -2.78327 | opp_overlap 4015265 4015269, overlap 4015261 4015249 4015269 AATTAACAGTGCTAA CAATAAAGCTCGGC CTAG GCCGAGCTTTATTG ATTTCACCATTTAGT TERM 4633 4015290 - 4015265 - T 100 -16.3 -3.65201 | opp_overlap 4015262 4015261 4015249 4015269, overlap 4015269 TAACAGTGCTAACAA TAAAGCTCGGC CTAG GCCGAGCTTTA TTGATTTCACCATTT TERM 4634 4015286 - 4015269 - T 100 -12.7 -4.45068 | opp_overlap 4015262 4015261 4015249 4015269, overlap 4015265 AGTGCTAACAATAAA GCTCGGC CTAG GCCGAGC TTTATTGATTTCACC TERM 4635 4015269 - 4015286 + T 100 -12.7 -4.39696 | opp_overlap 4015269 4015265, overlap 4015262 4015261 4015249 AGTGCTAACAATAAA GCTCGGC CTAG GCCGAGC TTTATTGATTTCACC Spea_3273 4015570 - 4015304 - | hypothetical protein Spea_3275 4019033 - 4017075 - | sulfatase Spea_3274 4015714 - 4017126 + | hypothetical protein TERM 4636 4019313 - 4019340 + Tr 76 -9.2 -3.66288 | gap 1, opp_overlap 4019313 4019316, overlap 4019315 4019316 TGATTGTAATGAAAA CAA-GGCCGGC GACTAAA GCCGGCCATTG TTATGTTAGCGGGTC TERM 4637 4019340 - 4019313 - TR 86 -9.2 -4.42238 | gap 1, opp_overlap 4019313 4019315 4019316, overlap 4019316 TGATTGTAATGAAAA CAA-GGCCGGC GACTAAA GCCGGCCATTG TTATGTTAGCGGGTC TERM 4638 4019315 - 4019337 + Tr 71 -7.6 -3.9644 | opp_overlap 4019313 4019316, overlap 4019313 4019316 ATTGTAATGAAAACA AGGCCGGC GACTAAA GCCGGCCA TTGTTATGTTAGCGG TERM 4639 4019336 - 4019316 - TR 91 -11.1 -4.32402 | opp_overlap 4019315 4019313 4019316, overlap 4019313 TTGTAATGAAAACAA GGCCGGC GACTAAA GCCGGCC ATTGTTATGTTAGCG TERM 4640 4019316 - 4019336 + Tr 78 -11.1 -2.97382 | opp_overlap 4019316 4019313, overlap 4019315 4019313 TTGTAATGAAAACAA GGCCGGC GACTAAA GCCGGCC ATTGTTATGTTAGCG Spea_3276 4020491 - 4019346 - | peptidase T-like protein Spea_3277 4020681 - 4021115 + | CMP/dCMP deaminase zinc-binding TERM 4641 4021184 - 4021148 - f 91 -13.4 -3.03619 | gap 1, opp_overlap 4021151 4021158, overlap 4021151 4021158 AAGCACCGCTTAACA TGATTAAAAAGGACGCT GATT AGCGTCCTTTTTAAT-A TAATGAGCTTAAACA TERM 4642 4021182 - 4021151 - f 100 -17.6 -2.74192 | opp_overlap 4021151 4021158, overlap 4021148 4021158 CACCGCTTAACATGA TTAAAAAGGACGCT GATT AGCGTCCTTTTTAA TATAATGAGCTTAAA TERM 4643 4021151 - 4021182 + F 100 -17.6 -2.80994 | opp_overlap 4021151 4021148 4021158, overlap 4021158 CACCGCTTAACATGA TTAAAAAGGACGCT GATT AGCGTCCTTTTTAA TATAATGAGCTTAAA TERM 4644 4021158 - 4021175 + F 95 -11.3 -4.82667 | opp_overlap 4021151 4021148 4021158, overlap 4021151 TAACATGATTAAAAA GGACGCT GATT AGCGTCC TTTTTAATATAATGA TERM 4645 4021175 - 4021158 - f 95 -11.3 -4.8083 | opp_overlap 4021158 4021151, overlap 4021151 4021148 TAACATGATTAAAAA GGACGCT GATT AGCGTCC TTTTTAATATAATGA TERM 4646 4021222 - 4021188 - f 80 -10.2 -3.65812 | opp_overlap 4021198, overlap 4021191 TCCTTTTTAATATAA TGAGCTTAAACATAGT TAA ACTAGGTTTAAGCTTA AAAGTCGTTAAAAGC TERM 4647 4021219 - 4021191 - f 82 -11.9 -2.94293 | opp_overlap 4021198, overlap 4021188 TTTTTAATATAATGA GCTTAAACATAGT TAA ACTAGGTTTAAGC TTAAAAGTCGTTAAA Spea_3278 4021659 - 4022090 + | hypothetical protein Spea_3279 4022170 - 4022703 + | cation antiporter TERM 4648 4022920 - 4022930 + G 77 -6.8 -4.46757 | TTATCAGTGTTATCG GCGT ACT ACGC TTTTCTGACTCTGTT Spea_3280 4022700 - 4022999 + | multiple resistance and pH regulation protein F Spea_3281 4022996 - 4023322 + | monovalent cation/proton antiporter, MnhG/PhaG subunit Spea_3282 4023415 - 4024452 + | putative monovalent cation/H+ antiporter subunit B Spea_3283 4024452 - 4024814 + | NADH-ubiquinone oxidoreductase chain 4L TERM 4649 4025193 - 4025205 + G 70 -9.1 -3.34075 | overlap 4025192 GGATGTTCGGCATCG TCGCC ACT GGCGA TCTGTTTAATGTATT Spea_3284 4024814 - 4026292 + | putative monovalent cation/H+ antiporter subunit D TERM 4650 4027410 - 4027427 + G 86 -4.1 -5.60993 | gap 1, overlap 4027412 CCTCGGCTTTACCAT GCCTGTCA CCA TGGC-GGC TTTTTTTATCGCCAG Spea_3285 4026289 - 4027779 + | NADH dehydrogenase (quinone) Spea_3286 4027769 - 4028188 + | hypothetical protein Spea_3287 4028175 - 4029875 + | putative monovalent cation/H+ antiporter subunit D TERM 4651 4029917 - 4029893 - f 74 -9.3 -3.46647 | opp_overlap 4029895, overlap 4029891 4029895 TTGAGTGAGGAAAGA TATGGGGTCAA AGT CTGACCCCATT TATCATACACCCACG TERM 4652 4029915 - 4029895 - f 86 -11.9 -3.30418 | opp_overlap 4029895, overlap 4029893 4029891 GAGTGAGGAAAGATA TGGGGTCAA AGT CTGACCCCA TTTATCATACACCCA TERM 4653 4029895 - 4029915 + F 90 -11.2 -3.96148 | opp_overlap 4029895 4029893 4029891 GAGTGAGGAAAGATA TGGGGTCA AAGTC TGACCCCA TTTATCATACACCCA TERM 4654 4030249 - 4030274 + G 74 -6.9 -4.25104 | CAGCGATTTAAAGCT GTGACTTATCT GGAT GGATATGTCAC TTTTGATGAAAACCG TERM 4655 4030454 - 4030442 - g 71 -3.4 -4.77438 | overlap 4030453 AGCTATCAGTAAAAA GCTT CAACC AAGC CACGGTTATGCGTGA TERM 4656 4030690 - 4030672 - g 76 -8.2 -4.05816 | opp_overlap 4030672 4030676, overlap 4030676 CAAAATCATGACAAA CAAATGCA TCC TGCATTCG TTCAATTGGATGATG TERM 4657 4030686 - 4030676 - g 74 -5.4 -4.59944 | opp_overlap 4030676 4030672, overlap 4030672 ATCATGACAAACAAA TGCA TCC TGCA TTCGTTCAATTGGAT Spea_3288 4030159 - 4031469 + | hypothetical protein TERM 4658 4031513 - 4031475 - T 71 -6.1 -4.25848 | overlap 4031478 4031485 AAGCTTGTAGGAAAA CCATCTATAAGGCTGAG TGCTG CTCAGCCCTATAAACCA ACGTAAAAACATCGC TERM 4659 4031510 - 4031478 - T 83 -12.2 -3.13504 | overlap 4031475 4031485 CTTGTAGGAAAACCA TCTATAAGGCTGAG TGCTG CTCAGCCCTATAAA CCAACGTAAAAACAT TERM 4660 4031503 - 4031485 - T 77 -10.3 -3.42124 | overlap 4031478 4031475 GAAAACCATCTATAA GGCTGAG TGCTG CTCAGCC CTATAAACCAACGTA TERM 4661 4031989 - 4031962 - T 85 -12.8 -3.16267 | opp_overlap 4031963 4031967, overlap 4031967 GTTAACTATACCGAA CTAAAGCGCAGC ACAA GCTGCGCTTTAT TGTGCTCGGGACAGT TERM 4662 4031963 - 4031988 + T 100 -16.3 -3.40403 | opp_overlap 4031962 4031967, overlap 4031967 TTAACTATACCGAAC TAAAGCGCAGC ACAA GCTGCGCTTTA TTGTGCTCGGGACAG TERM 4663 4031984 - 4031967 - T 93 -12.7 -3.94746 | opp_overlap 4031963 4031967, overlap 4031962 CTATACCGAACTAAA GCGCAGC ACAA GCTGCGC TTTATTGTGCTCGGG TERM 4664 4031967 - 4031984 + T 100 -12.7 -4.35483 | opp_overlap 4031967 4031962, overlap 4031963 CTATACCGAACTAAA GCGCAGC ACAA GCTGCGC TTTATTGTGCTCGGG Spea_3289 4032794 - 4032075 - | hypothetical protein TERM 4665 4032439 - 4032418 - G 81 -5.3 -5.13521 | gap 1 AAATGAGCGAAAAAA TATCG-GTAA TCA TTACTCGATA GAGCTTTGACCACTG TERM 4666 4032805 - 4032826 + r 70 -8.1 -3.78022 | GCCATTATCTTAGGT GCCAATAGT AATT ATTATTGGC TTTAATCAATCTAAA Spea_3290 4033429 - 4032794 - | hypothetical protein Spea_3291 4033597 - 4034154 + | hypothetical protein Spea_3292 4034230 - 4034568 + | hypothetical protein TERM 4667 4034619 - 4034596 - T 95 -14 -3.75665 | opp_overlap 4034599 4034602 TTATACCGGACTAAA GCACAACACT GCGT AGTGTTGTGC TTAGCGCTAATAAAG Spea_3293 4035372 - 4034878 - | hypothetical protein Spea_3294 4035688 - 4036263 + | hypothetical protein TERM 4668 4036848 - 4036826 - g 83 -6.3 -4.9792 | CATCCTACAGAAAAA GCCCGACAA GCATG TTATCGAGC ACTCTTTAAACACCA Spea_3295 4036322 - 4037014 + | hypothetical protein TERM 4669 4037248 - 4037210 - T 80 -4.6 -5.1848 | gap 1, overlap 4037211 4037212 AACTAAGGCAAAAAA GC-CTCGGTTAGCGAAG TACTGT CTTGACTAACCGGGAGC GTCCATATATATCTA Spea_3296 4037850 - 4037281 - | hypothetical protein TERM 4670 4037403 - 4037413 + g 82 -3.2 -5.61881 | opp_overlap 4037397, overlap 4037397 TAAATAACATAACAA CAGT TAG GCTG TTTTTATTTTTGCAA Spea_3297 4038560 - 4038030 - | hypothetical protein TERM 4671 4038078 - 4038068 - G 79 -4 -5.26316 | TCAGTGCATAAAAAA CATT TAC AATG GCACTCACGAATAAA Spea_3298 4040521 - 4038644 - | NACHT family-like NTPase TERM 4672 4039362 - 4039343 - G 74 -5.8 -4.66609 | opp_overlap 4039343 CATTTCATGTAAAAA TCGATAAT CATG ATCATCGA TTTGCAGTAAACACG TERM 4673 4040312 - 4040326 + g 82 -5.8 -5.2166 | opp_overlap 4040312 CAATTGACAAGGAAA GTAAAA CTC TTTTAC TTTTTTAGGTTCTTC Spea_3299 4040831 - 4041472 + | hypothetical protein Spea_3300 4041918 - 4041469 - | hypothetical protein TERM 4674 4041873 - 4041862 - G 80 -7.2 -4.56093 | AAGCGAACTAGAAAA GCCG CTAT CGGC ACTAATCGTAATAGG TERM 4675 4042042 - 4042059 + r 82 -8.4 -4.21194 | opp_overlap 4042042 TCACCCAATAAAAAA CGCACC ACTAAG GGTGCG TTTTACGTAATGGCG TERM 4676 4042059 - 4042042 - R 95 -8.4 -5.4833 | opp_overlap 4042042 TCACCCAATAAAAAA CGCACC ACTAAG GGTGCG TTTTACGTAATGGCG Spea_3301 4045082 - 4042194 - | glycine dehydrogenase TERM 4677 4042815 - 4042833 + g 76 -8.8 -3.80174 | opp_overlap 4042813 4042812 TGCGCTACCAAATGG CGCTGCAG ATA CTGCACCG TTATTGTCAGACTCT TERM 4678 4044504 - 4044514 + g 77 -6.8 -4.43477 | opp_overlap 4044502 4044504 CTCAAAACCAAAACA CTCG GCG CGAG TTTTAATTACGTCGA TERM 4679 4045331 - 4045291 - R 82 -10.6 -3.56558 | gap 1, opp_overlap 4045299 4045329, overlap 4045295 4045299 TTAGAAGCCATATAA CGAACAAAGCCCCAA-TCA GCGA TGAGTTGGGGCTTTGTGAG TCATCGACGCTTATT TERM 4680 4045327 - 4045295 - R 100 -14.4 -3.50734 | gap 1, opp_overlap 4045299, overlap 4045291 4045299 AAGCCATATAACGAA CAAAGCCCCAA-TCA GCGA TGAGTTGGGGCTTTG TGAGTCATCGACGCT TERM 4681 4045299 - 4045323 + r 83 -9.4 -3.93695 | gap 1, opp_overlap 4045295 4045291 4045299 CATATAACGAACAAA GCCCCAA-TCA GCGA TGAGTTGGGGC TTTGTGAGTCATCGA TERM 4682 4045323 - 4045299 - R 90 -9.4 -4.38203 | gap 1, opp_overlap 4045299, overlap 4045295 4045291 CATATAACGAACAAA GCCCCAA-TCA GCGA TGAGTTGGGGC TTTGTGAGTCATCGA Spea_3302 4045731 - 4045342 - | glycine cleavage system protein H Spea_3303 4047254 - 4046160 - | glycine cleavage system aminomethyltransferase T TERM 4683 4047005 - 4047020 + g 76 -9 -3.66178 | opp_overlap 4047005 GCATACCGCCGTAAA GTGCCT TACC AGGCAC TTTAAGCTTAGCGAC TERM 4684 4047020 - 4047005 - G 72 -9 -3.55071 | opp_overlap 4047005 GCATACCGCCGTAAA GTGCCT TACC AGGCAC TTTAAGCTTAGCGAC Spea_3304 4048813 - 4047593 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Spea_3305 4050190 - 4048910 - | 2-polyprenyl-6-methoxyphenol 4-hydroxylase TERM 4685 4050241 - 4050272 + r 83 -10.9 -3.72989 | opp_overlap 4050243, overlap 4050243 TGTTGCAGATACAAA AACCGCCATTGCA AATTGC TGCGATGGCGGTA TTTAGGTATGAGTTT TERM 4686 4050243 - 4050270 + r 95 -13.5 -3.4404 | opp_overlap 4050243, overlap 4050241 TTGCAGATACAAAAA CCGCCATTGCA AATTGC TGCGATGGCGG TATTTAGGTATGAGT TERM 4687 4050270 - 4050243 - R 100 -12 -5.03994 | opp_overlap 4050243 4050241 TTGCAGATACAAAAA CCGCCATTGCAA ATTG CTGCGATGGCGG TATTTAGGTATGAGT Spea_3306 4050862 - 4050287 - | yecA family protein Spea_3307 4051140 - 4050895 - | hypothetical protein TERM 4688 4051003 - 4050974 - G 75 -6.4 -4.42386 | overlap 4050975 GGGTTAGCCACAAAA GCAGCAATCCAC TCTATC GAGGATTGCTGG CTAATCGATTCATCG TERM 4689 4051002 - 4050975 - G 71 -9.9 -3.2511 | overlap 4050974 GGTTAGCCACAAAAG CAGCAATCCAC TCTATC GAGGATTGCTG GCTAATCGATTCATC TERM 4690 4051535 - 4051519 - g 70 -10.1 -3.04322 | overlap 4051509 GTCAACTCTTGAAGA CGCACTC GTT GAGCGCG CTACAAAACCTGACG Spea_3308 4051244 - 4051564 + | hypothetical protein TERM 4691 4051864 - 4051845 - T 70 -7.8 -3.65415 | opp_overlap 4051845, overlap 4051841 TTAATTACAAATTAA GCCATCTC ATTT GAGGTGGC TTTTTTGTTTATTAA TERM 4692 4051845 - 4051864 + T 100 -10 -5.80003 | opp_overlap 4051845 4051841 TTAATTACAAATTAA GCCATCTC ATTT GAGGTGGC TTTTTTGTTTATTAA TERM 4693 4051968 - 4051943 - T 81 -6.7 -4.70319 | overlap 4051947 CTAGGAAAATCAAAA GCATGACGGGC TAAA GCCCGACCTAC TGAAGAGAATATGTT Spea_3309 4053148 - 4052297 - | hypothetical protein Spea_3310 4053567 - 4053181 - | hypothetical protein Spea_3311 4053775 - 4054404 + | 5-formyltetrahydrofolate cyclo-ligase TERM 4694 4054383 - 4054407 + F 70 -7.9 -3.70751 | TTTCACTCCTAGTCA CTGCTATAGCT TTG AGCAATAGTAG TTATTAGACTTATTA Spea_3312 4054610 - 4055230 + | hypothetical protein TERM 4695 4055266 - 4055249 - f 71 -9.9 -2.80493 | overlap 4055248 CCTTTAACAGAGAAG CTCTTCG ACAG CGAAGAG ATTAGCCAATGGTTA TERM 4696 4055268 - 4055282 + F 71 -5 -4.58395 | opp_overlap 4055268 TCGACAGCGAAGAGA TTAGCC AAT GGTTAA TTTTTCGCAAATGAC Spea_3313 4055275 - 4056012 + | hypothetical protein TERM 4697 4056076 - 4056050 - T 84 -12.4 -3.04239 | opp_overlap 4056050 4056056, overlap 4056056 CAGAGCTAGATAAAG TAAAAAGAGCGC AAT GCGCTCTTTTTG TTTGTATCGCTGACA TERM 4698 4056050 - 4056076 + T 100 -14.6 -4.0641 | opp_overlap 4056050 4056056, overlap 4056056 CAGAGCTAGATAAAG TAAAAAGAGCGC AAT GCGCTCTTTTTG TTTGTATCGCTGACA TERM 4699 4056056 - 4056070 + T 100 -11.4 -5.42975 | opp_overlap 4056056 4056050, overlap 4056050 TAGATAAAGTAAAAA GAGCGC AAT GCGCTC TTTTTGTTTGTATCG TERM 4700 4056070 - 4056056 - T 95 -11.4 -5.07011 | opp_overlap 4056050 4056056, overlap 4056050 TAGATAAAGTAAAAA GAGCGC AAT GCGCTC TTTTTGTTTGTATCG Spea_3314 4056761 - 4056093 - | uracil-DNA glycosylase Spea_3315 4057017 - 4057574 + | pilin, putative Spea_3316 4057654 - 4058187 + | methylation site containing protein Spea_3317 4058262 - 4058582 + | hypothetical protein TERM 4701 4058642 - 4058624 - T 100 -13.2 -5.26875 | opp_overlap 4058624 CGCTTAACGAAAAAA CGCCATCA AAT TGATGGCG TTTTTTGTATCTGTA TERM 4702 4058624 - 4058642 + T 100 -13.2 -5.4492 | opp_overlap 4058624 CGCTTAACGAAAAAA CGCCATCA AAT TGATGGCG TTTTTTGTATCTGTA Spea_3318 4059276 - 4058662 - | lysine exporter protein LysE/YggA Spea_3319 4059695 - 4060237 + | thiol:disulfide interchange protein, putative TERM 4703 4060312 - 4060281 - f 85 -5.9 -5.18726 | opp_overlap 4060284, overlap 4060284 GCGTTACAATAAAAA CAATAAGGTCACG TTATTT CGTGGCCTTATTT TTTTAGCTATCACTT TERM 4704 4060309 - 4060284 - f 83 -7.6 -4.68512 | opp_overlap 4060284, overlap 4060281 TTACAATAAAAACAA TAAGGTCACG TTATTT CGTGGCCTTA TTTTTTTAGCTATCA TERM 4705 4060284 - 4060309 + F 100 -9.8 -5.50499 | opp_overlap 4060281 4060284 TTACAATAAAAACAA TAAGGTCACG TTATTT CGTGGCCTTA TTTTTTTAGCTATCA Spea_3320 4060373 - 4061827 + | Fis family transcriptional regulator TERM 4706 4062164 - 4062152 - g 76 -4.8 -4.8236 | TATGCAAAAAAAGAA CGTG AATAA CACG ATAGATAACCCAGCA Spea_3321 4062138 - 4063604 + | cytochrome c oxidase cbb3 type accessory protein FixG Spea_3322 4064078 - 4065676 + | AMP-dependent synthetase and ligase TERM 4707 4065788 - 4065750 - T 100 -19.2 -4.02535 | opp_overlap 4065741 4065758 4065762, overlap 4065753 CCACAAGTAATGAAA TGATTAGAGCAACAAGTC AAT GACTTGTTGCTCTAATAA AGCGCTACTTATCAA TERM 4708 4065785 - 4065753 - T 100 -20.9 -3.04696 | opp_overlap 4065741 4065758 4065762, overlap 4065750 CAAGTAATGAAATGA TTAGAGCAACAAGTC AAT GACTTGTTGCTCTAA TAAAGCGCTACTTAT TERM 4709 4065758 - 4065780 + T 95 -15 -2.78596 | opp_overlap 4065753 4065750, overlap 4065741 4065762 AATGAAATGATTAGA GCAACAAGTC AAT GACTTGTTGC TCTAATAAAGCGCTA TERM 4710 4065762 - 4065776 + T 70 -8.6 -3.29471 | opp_overlap 4065753 4065750, overlap 4065758 4065741 AAATGATTAGAGCAA CAAGTC AAT GACTTG TTGCTCTAATAAAGC Spea_3323 4066161 - 4065793 - | hypothetical protein Spea_3324 4068360 - 4066318 - | lipid ABC transporter ATPase/inner membrane protein TERM 4711 4068058 - 4068048 - G 82 -5.4 -5.16472 | overlap 4068050 AAAAACGGCAAAAAA TAGC ACT GCTA CTCAGCGCAGTAATG TERM 4712 4068433 - 4068418 - R 85 -7.5 -4.9645 | AGCAGAATAACAAAA CCCGC GCAAAG GCGGG CAATGTTTATTTGTA Spea_3325 4069082 - 4068513 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Spea_3326 4069644 - 4069120 - | hypothetical protein TERM 4713 4069753 - 4069719 - R 76 -7.2 -4.17448 | TAACTAAACGACAAA GAGGCCAACTCA TTTATATTCTC TGAGTCGGCCCC GGATTGGCATAACTT Spea_3327 4071838 - 4069772 - | TonB-dependent heme/hemoglobin receptor family protein TERM 4714 4072526 - 4072510 - g 71 -3.7 -4.78149 | CTGACAAGCCAAAAA CGCTA AAAGAGG TAGCG AAAAAGTTGGATCCA Spea_3328 4072167 - 4072925 + | TonB family protein Spea_3329 4073100 - 4073876 + | MotA/TolQ/ExbB proton channel Spea_3330 4073873 - 4074286 + | biopolymer transport protein ExbD/TolR Spea_3331 4074481 - 4075419 + | periplasmic binding protein TERM 4715 4075661 - 4075677 + G 73 -8 -4.183 | opp_overlap 4075660 4075657 4075661 CTAGTGATCAATAAT GTGCGT TTACC ACGCAC TTTATTGGCGCTTGC Spea_3332 4075478 - 4076494 + | transport system permease protein Spea_3333 4076508 - 4077314 + | hemin importer ATP-binding subunit TERM 4716 4077318 - 4077367 + T 73 -10.1 -2.91695 | gap 1, opp_overlap 4077318 4077331 4077362, overlap 4077306 4077315 4077357 4077359 4077362 CTACTGTTTTAGAAA GCAGTTTTAAGGAGCCTGCTCTAG GAA CT-GAGCAGGCACTATAAGAGTGC TCATTTAGCCATGAA TERM 4717 4077354 - 4077331 - T 81 -11.8 -2.72839 | gap 1, opp_overlap 4077318 4077315, overlap 4077318 AAGCAGTTTTAAGGA GCCTGCTCTAG GAA CT-GAGCAGGC ACTATAAGAGTGCTC TERM 4718 4077359 - 4077390 + T 70 -8.9 -3.24076 | opp_overlap 4077318 4077362, overlap 4077318 4077315 4077357 4077362 ACTGAGCAGGCACTA TAAGAGTGCTCAT TTAGCC ATGAACACTCTTA TCTCTTATATCCTAC TERM 4719 4077387 - 4077362 - T 70 -8.4 -3.42996 | opp_overlap 4077318 4077315 4077362 4077359 4077357, overlap 4077318 GAGCAGGCACTATAA GAGTGCTCAT TTAGCC ATGAACACTC TTATCTCTTATATCC Spea_3334 4077959 - 4077402 - | TetR family transcriptional regulator TERM 4720 4078006 - 4077985 - H 88 -3.9 -5.79595 | gap 1, opp_overlap 4077985 4077988, overlap 4077978 4077988 4078003 CGCTAAAATAAAAAA TAT-TTCTAC AAT GTAGAATATA TTATATATAAGTGAT Spea_3335 4078095 - 4078628 + | deaminase-reductase domain-containing protein TERM 4721 4078836 - 4078852 + G 93 -13.7 -3.5944 | TGATATTGCGATATC GCGCTGC CAA GCAGCGC TTTGGCAATATCAAT Spea_3336 4078765 - 4079262 + | hypothetical protein Spea_3337 4080220 - 4079315 - | LysR family transcriptional regulator Spea_3338 4080372 - 4080797 + | transmembrane pair domain-containing protein Spea_3339 4081047 - 4082486 + | coproporphyrinogen III oxidase Spea_3340 4082569 - 4082958 + | hypothetical protein TERM 4722 4082948 - 4082958 + F 71 -4 -4.90869 | TCGCTTATATTGTTT TTAC CAA GTAA TTTTTCGTTACTCGT TERM 4723 4083046 - 4083020 - f 70 -2.9 -5.03747 | opp_overlap 4083020 4083015, overlap 4083022 AAAGTTGCTAAAAAA GGCACGCACAA GCCAT TTGCGAGTGTC TTTTACTTTCGCAAC Spea_3341 4083261 - 4083431 + | periplasmic nitrate reductase NapE Spea_3342 4083472 - 4084650 + | trimethylamine-N-oxide reductase c-type cytochrome TorC Spea_3343 4084665 - 4087157 + | trimethylamine-N-oxide reductase TorA TERM 4724 4087574 - 4087528 - g 78 -11.6 -3.01791 | ACTCTTTGGTGAACA GCATCAGCAGATGACTCAGTTT TTA AAACAGAGTCAACTGCAGGTAC AAAGTGAGTTTCCAG Spea_3344 4087154 - 4087819 + | chaperone protein TorD TERM 4725 4087891 - 4087844 - T 93 -10 -5.04385 | opp_overlap 4087855, overlap 4087821 4087855 GATACTTTCAAAAAA GTATTCAAAAAGGGTGATGAAC TGAT GTTCATCACCCTTTTTTATGTC TGCAGACTTATCAAC TERM 4726 4087880 - 4087855 - T 100 -16.3 -4.7329 | opp_overlap 4087855, overlap 4087821 4087844 AAAAGTATTCAAAAA GGGTGATGAAC TGAT GTTCATCACCC TTTTTTATGTCTGCA TERM 4727 4087855 - 4087880 + T 100 -16.3 -5.4251 | opp_overlap 4087821 4087855 4087844 AAAAGTATTCAAAAA GGGTGATGAAC TGAT GTTCATCACCC TTTTTTATGTCTGCA Spea_3345 4091034 - 4087918 - | Hpt sensor hybrid histidine kinase TERM 4728 4088599 - 4088609 + g 71 -6.8 -4.04318 | opp_overlap 4088599, overlap 4088595 CATAATGGCATCGAA CTGC TTC GCAG TTTGTACTGTATACG Spea_3346 4091116 - 4092180 + | periplasmic sensory protein associated with the TorRS two-component regulatory system Spea_3347 4092977 - 4092267 - | DNA-binding transcriptional regulator TorR TERM 4729 4093129 - 4093110 - R 100 -12.2 -5.37043 | opp_overlap 4093108 ACCCCATATAAAAAA GCCAACTC ATAA GAGTTGGC CATTAAGTATCGAGA Spea_3348 4093908 - 4093171 - | hypothetical protein Spea_3349 4094874 - 4094050 - | Ion transport protein Spea_3350 4095579 - 4095283 - | hypothetical protein Spea_3351 4095763 - 4096413 + | membrane-flanked domain-containing protein TERM 4730 4096809 - 4096796 - g 74 -8.1 -3.88331 | opp_overlap 4096795, overlap 4096792 TCTAAAGAAAATGAA GCCGA ACTA TCGGC ATTAGCTTACAAAGA TERM 4731 4097420 - 4097406 - g 71 -10 -3.13403 | overlap 4097404 GTGGCTCGACTAATA TGCTGG TTC CCAGCA TGAGCCGTGGTGAAA TERM 4732 4097855 - 4097885 + G 72 -8.2 -3.71848 | ATCTCTATCATTGCG GCGCGAGAAATTGC AGA GCGATCCCTCGTGC TTATTCATAACGACC Spea_3352 4096403 - 4097917 + | membrane-flanked domain-containing protein TERM 4733 4098399 - 4098413 + G 73 -10 -3.40403 | GCACAAGGCTATCAT CGACCA GTT TGGTCG TTATCCTCACCGCAA Spea_3353 4097920 - 4098498 + | hypothetical protein TERM 4734 4098571 - 4098537 - T 100 -14.5 -3.62531 | opp_overlap 4098542, overlap 4098542 GAGTAAAAAGACGAA CAAAACAGCCACACA AATGA TGTGTGGCTGTTTTT GTATTGCATTTTACA TERM 4735 4098566 - 4098542 - T 100 -14.4 -4.82518 | opp_overlap 4098542, overlap 4098537 AAAAGACGAACAAAA CAGCCACACA AATGA TGTGTGGCTG TTTTTGTATTGCATT TERM 4736 4098542 - 4098566 + T 100 -14.4 -5.1167 | opp_overlap 4098537 4098542 AAAAGACGAACAAAA CAGCCACACA AATGA TGTGTGGCTG TTTTTGTATTGCATT Spea_3354 4099117 - 4098674 - | UspA domain-containing protein Spea_3355 4099634 - 4099203 - | UspA domain-containing protein Spea_3356 4100143 - 4099763 - | hypothetical protein TERM 4737 4100290 - 4100305 + H 72 -9 -3.33696 | opp_overlap 4100290 TTCATTATTATCAGA CCGACT AATC AGTCGG TTACTTAAAGGCCAC Spea_3357 4100337 - 4101764 + | aldehyde dehydrogenase TERM 4738 4101924 - 4101939 + G 74 -10.4 -3.14344 | CCTATTTCATCATTT CGCCTC AAAA GAGGCG TTGATGAACCACCTG Spea_3358 4101787 - 4102359 + | TetR family transcriptional regulator Spea_3360 4104094 - 4102730 - | PAS/PAC sensor signal transduction histidine kinase Spea_3361 4105627 - 4104098 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 4739 4105438 - 4105466 + g 70 -8.9 -3.41262 | overlap 4105435 ATAGATTACGCCCCT CTTCACCTGAGGT GGT GTCTTGGGTGAAG TTCATATCTTGTATC Spea_3362 4106973 - 4105762 - | hypothetical protein Spea_3363 4108302 - 4107001 - | hypothetical protein Spea_3364 4109055 - 4108324 - | ABC transporter related TERM 4740 4109425 - 4109443 + r 72 -4.6 -4.82756 | CTGCGACTAACTTTG CTATTAAC TCT GCTAATAG TTTTATTCATTGTCT Spea_3365 4110735 - 4109473 - | RND family efflux transporter MFP subunit TERM 4741 4110883 - 4110870 - H 76 -6.7 -4.3129 | opp_overlap 4110876 4110877 CATTGACTATTAAAA GTGTC CGCG GACAC CCGCTAAAAGTGTCC TERM 4742 4111243 - 4111229 - H 71 -5 -4.62471 | opp_overlap 4111219 4111216 4111229 CGTAATTGGTAAAAA CCAATC ATT GATTAG CTTTAACAAAATAAA TERM 4743 4112082 - 4112096 + G 70 -10 -2.98088 | TATGCACCTAATCGC GAAGCC GAT GGCTTC TATGTGGGTTTCAAC Spea_3366 4111275 - 4112432 + | porin TERM 4744 4112597 - 4112558 - T 86 -11 -3.86822 | opp_overlap 4112558 4112570, overlap 4112570 GAACCTCTTTAGAAA GTCATAAAAAAACACTTC CTCG GAAGTGTTTTTTTATTGC CTAATTAACTTTGCT TERM 4745 4112558 - 4112598 + T 77 -10.8 -2.82602 | gap 1, opp_overlap 4112558 4112570, overlap 4112570 GAACCTCTTTAGAAA GTC-ATAAAAAAACACTTC CTCG GAAGTGTTTTTTTATTGCC TAATTAACTTTGCTG TERM 4746 4112585 - 4112570 - T 100 -7.6 -5.68039 | opp_overlap 4112558 4112570, overlap 4112558 AAAGTCATAAAAAAA CACTTC CTCG GAAGTG TTTTTTTATTGCCTA TERM 4747 4112570 - 4112585 + T 100 -7.6 -5.8187 | opp_overlap 4112570 4112558, overlap 4112558 AAAGTCATAAAAAAA CACTTC CTCG GAAGTG TTTTTTTATTGCCTA Spea_3367 4114166 - 4112640 - | response regulator receiver protein TERM 4748 4114344 - 4114329 - H 71 -4.8 -4.6313 | GGTAAAATAAAATAA TATGTT CACA AACATA AAATAAGAGAGCCAT TERM 4749 4115199 - 4115186 - g 72 -3.1 -4.91873 | TAGATGAACGAAAAA GAACT GGCG AGTCC TAGCAGACGCCAACT Spea_3368 4115174 - 4116733 + | flavocytochrome c TERM 4750 4116964 - 4116954 - g 72 -3.2 -4.98531 | GCGCTAAAGTAAAAA TCGC ACC GCAA TCAGCGACAACCTTA TERM 4751 4117448 - 4117433 - g 75 -3.2 -5.18357 | GAAGCGATGAAAAAA GCGG GGATCAAG CCGC TAGCCCCTGTAGGTA TERM 4752 4117760 - 4117788 + G 80 -12.5 -3.0263 | ACCACAGCCTATACG TTTGCTAGCGCCT ACA AGGCACTAGCAGA TCTTGGACAGATGAT Spea_3369 4116764 - 4118449 + | phenylalanine/histidine ammonia-lyase Spea_3370 4118643 - 4119023 + | tetraheme cytochrome c Spea_3371 4119804 - 4119421 - | hypothetical protein TERM 4753 4120017 - 4119996 - R 75 -10.1 -2.92522 | TTACGCAAGAGCAGA TCCTAGGGC CGAG GCCCTAGGT AAAATAGCGACAAGC Spea_3372 4120617 - 4120060 - | hypothetical protein TERM 4754 4120208 - 4120197 - G 74 -7.2 -4.32046 | GGCTGAAAAAGTAAA CCGC AATG GCGG TAGATAGGAGTCCAC TERM 4755 4121295 - 4121247 - g 74 -5.4 -4.63218 | gap 1 TTGCGCTCAAGAAAA CTGATCGATGGGTGTGGATCCAT AGGC ATGCATCCACAGC-ATCTAACAG TCAAACGAAAGGAAA Spea_3373 4120838 - 4121347 + | hypothetical protein Spea_3374 4122227 - 4121391 - | periplasmic binding protein TERM 4756 4122919 - 4122902 - R 79 -4.8 -5.12068 | opp_overlap 4122902 TACAGGCAACAAAAA GCCCCA ATGATA TGGGAC TAATTAAGAGGGGAA Spea_3375 4123682 - 4123161 - | hypothetical protein Spea_3376 4124615 - 4123998 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 4757 4124256 - 4124268 + g 76 -9.1 -3.72576 | CAGTAGCTTCTCGGT GGCCT CCC AGGCC TTTACTGCGGCGGCA Spea_3377 4126376 - 4124766 - | cobyric acid synthase Spea_3378 4126936 - 4126388 - | cobalbumin biosynthesis protein Spea_3379 4127712 - 4126933 - | cobalamin 5'-phosphate synthase Spea_3380 4129121 - 4128090 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Spea_3381 4130222 - 4129167 - | transport system permease protein TERM 4758 4129567 - 4129597 + g 71 -10.5 -2.72144 | overlap 4129566 GATAAGATAACGCTT CCGGCTGGCAA CCATAGGCC TTGCCAGCTGG CTTTGGCAAAACTGC TERM 4759 4130119 - 4130087 - G 77 -11.3 -3.19157 | overlap 4130079 CATCAACGGCACTAA CTGTTGCAGCGCCAA AAC TTGTCGCCGCAAAAG GGGTAAGCAAAGTTA Spea_3382 4131141 - 4130215 - | ABC transporter related TERM 4760 4131445 - 4131427 - R 71 -9.6 -2.86271 | overlap 4131424 CTGTTATCACAAGCA TTAGCGCT ATC AGCGCCAA CAAGATAACGCCGCA Spea_3383 4132533 - 4131919 - | phosphoglycerate mutase TERM 4761 4133383 - 4133394 + G 73 -4.4 -4.7373 | GCAGCGATATCATCA TGGT GGAA ACCA TTTTTGATACCCTAA TERM 4762 4135266 - 4135250 - g 70 -5.1 -4.4009 | CGCTATTGCAGAAAA TGTCGAT ATT ATCGGCA TGTCAGGGCTTATCA TERM 4763 4135848 - 4135836 - g 72 -4.8 -4.68994 | opp_overlap 4135845 ATCATCAGTGAAAAA TGGC TTACC GCCA AGGCTGTGATTGGCT Spea_3384 4132917 - 4136549 + | B12-dependent methionine synthase TERM 4764 4136651 - 4136629 - T 100 -15 -5.49234 | opp_overlap 4136629 AGAGCTAATAAAAAA GCCACACTTT CAA AAAGTGTGGC TTTTTTGACTGGTTA TERM 4765 4136629 - 4136651 + T 100 -15 -5.12617 | opp_overlap 4136629 AGAGCTAATAAAAAA GCCACACTTT CAA AAAGTGTGGC TTTTTTGACTGGTTA Spea_3385 4139404 - 4136672 - | TonB-dependent receptor TERM 4766 4139473 - 4139447 - R 100 -12.4 -4.84359 | opp_overlap 4139446 4139472 TTATCGCCATAAAAA TGTTGCAACCTT GTT AAGGTTGCACCA ATGTATACTGTATAC TERM 4767 4139596 - 4139568 - R 71 -7.4 -3.92542 | opp_overlap 4139573, overlap 4139541 4139571 CGGACGGCTAAATAA TTATGGGTGCGC GGATT GCGCACCTATTA GCAGATGATGAGTTG TERM 4768 4139573 - 4139591 + r 84 -12.4 -3.03441 | opp_overlap 4139571 4139568 GGCTAAATAATTATG GGTGCGCG GAT TGCGCACC TATTAGCAGATGATG Spea_3386 4140368 - 4139622 - | hypothetical protein TERM 4769 4139996 - 4140014 + g 100 -14.6 -4.06384 | opp_overlap 4139991 4140000 CAACGTTAAAGGTCA CGAACGCC ACA GGCGTTCG TTTGTCCTCTTCAGA TERM 4770 4140675 - 4140644 - R 100 -12.4 -5.09259 | opp_overlap 4140644 GAGCTGAAAACAAAA GCCCCGCTCATGAT GTCT ATCATAAACAGGGC TTTAAATTTTAGAAT Spea_3387 4141322 - 4140714 - | glutathione-dependent formaldehyde-activating enzyme TERM 4771 4141573 - 4141602 + r 74 -6.4 -4.33851 | overlap 4141575 CCGTTGTAGTGTATT GCCGCCAATGAT GCTCTG AACATTGGCGAC TTTGTTATAACGTTT Spea_3388 4142674 - 4141616 - | FAD-dependent pyridine nucleotide-disulfide oxidoreductase TERM 4772 4142046 - 4142018 - G 72 -3.1 -4.91712 | GTTAACCGATAAAAA CCCTATCTTAGTA AAC CACCACCATAGGG TTTTACCTAAAAATG Spea_3389 4142944 - 4143585 + | hypothetical protein TERM 4773 4145278 - 4145259 - g 76 -9.4 -3.68569 | opp_overlap 4145257 4145256 4145270 TTAGCGAGTGAACAA GTTAGTGA ACAG TCACTAAC ACTGTTGCGTGGCTT Spea_3390 4143630 - 4146215 + | MscS mechanosensitive ion channel Spea_3391 4146436 - 4146708 + | hypothetical protein TERM 4774 4147310 - 4147332 + G 82 -7.7 -4.59773 | GCAAACAGAAGCGGC GCTTGAGCG TATCT CGTTCGAGC TTTTTGAAGATGCGG Spea_3392 4147086 - 4148081 + | adenosine deaminase TERM 4775 4148123 - 4148155 + F 81 -11.5 -2.99649 | opp_overlap 4148116 4148128, overlap 4148128 GGGACAGACAAACTA AAAAAGCCTATTGGT TCA ATCAATAGGCTTTTG TGTCTGTACCAATCT TERM 4776 4148128 - 4148150 + F 93 -11.4 -4.64844 | opp_overlap 4148116 4148128, overlap 4148123 AGACAAACTAAAAAA GCCTATTGGT TCA ATCAATAGGC TTTTGTGTCTGTACC TERM 4777 4148150 - 4148128 - f 95 -9.2 -5.4387 | opp_overlap 4148128 4148123, overlap 4148116 AGACAAACTAAAAAA GCCTATTGGT TCA ATCAATAGGC TTTTGTGTCTGTACC Spea_3393 4148597 - 4148938 + | TM2 domain-containing protein TERM 4778 4148976 - 4149003 + T 91 -10 -4.57569 | opp_overlap 4148982, overlap 4148982 TAAACCACTAAACAT AAAAAAGACAGC TTGC GCTGTCTTTTTG TTTTTACGGCCATAA TERM 4779 4148997 - 4148982 - T 100 -9 -5.5762 | opp_overlap 4148982 4148976 ACTAAACATAAAAAA GACAGC TTGC GCTGTC TTTTTGTTTTTACGG TERM 4780 4148982 - 4148997 + T 100 -9 -5.61881 | opp_overlap 4148982, overlap 4148976 ACTAAACATAAAAAA GACAGC TTGC GCTGTC TTTTTGTTTTTACGG Spea_3394 4150357 - 4149053 - | hypothetical protein Spea_3395 4151089 - 4150415 - | RDD domain-containing protein TERM 4781 4150450 - 4150468 + g 79 -2.3 -5.4833 | opp_overlap 4150451, overlap 4150451 CGGTTTTGCCTATAT AGTCGTG AAGTG CACGGCG TTTTTTGTTAGATAG Spea_3397 4151994 - 4152731 + | extracellular solute-binding protein Spea_3398 4152739 - 4153419 + | polar amino acid ABC transporter, inner membrane subunit TERM 4782 4153824 - 4153793 - g 76 -8.1 -4.07568 | opp_overlap 4153782 4153799 CTGGTTGGCCTAAAA GATAAGGCCGATG CTTATC CATCGAGCTTATC GGGTGGCCAAAAACA Spea_3399 4153412 - 4154137 + | ABC transporter related TERM 4783 4154264 - 4154287 + T 74 -8.9 -3.48153 | opp_overlap 4154256, overlap 4154282 GTAAGCAGCCACTTC TAGCCCAGG TTGCTT TCTGGGCTA TTATCCCTTGTTGAT Spea_3400 4155177 - 4154263 - | LysR family transcriptional regulator Spea_3401 4155333 - 4156553 + | adenosylhomocysteinase TERM 4784 4156566 - 4156588 + F 74 -9.2 -3.57144 | opp_overlap 4156562 TAAGCATTATACTTA GCAGGAAG CGCGTGT CTTCCTGC TTTGACCATAAAAAC Spea_3402 4156683 - 4157162 + | YbaK/prolyl-tRNA synthetase associated region Spea_3403 4157423 - 4157941 + | hypothetical protein Spea_3404 4158264 - 4158839 + | NAD(P)H dehydrogenase (quinone) Spea_3405 4158870 - 4160117 + | Na+ dependent nucleoside transporter TERM 4785 4160148 - 4160180 + F 100 -10.1 -5.63374 | gap 1, opp_overlap 4160148 ATCGTAACCCATCAA TGCTTAGT-CCAGA TTAATC TCTGGTACTAAGCA TTTTTTTAGTCTTAA TERM 4786 4160180 - 4160148 - f 75 -10.1 -3.22091 | gap 1, opp_overlap 4160148 ATCGTAACCCATCAA TGCTTAGT-CCAGA TTAATC TCTGGTACTAAGCA TTTTTTTAGTCTTAA Spea_3406 4160440 - 4161102 + | putative periplasmic ligand-binding sensor protein TERM 4787 4161170 - 4161129 - f 83 -9.6 -3.83026 | opp_overlap 4161128 GCCTTCGATAGCAAA TCAGTGGTAGCCAAAT GCCCTTTTCA ATTTGGCCGCCACTGA ATACTCTTCACTAAC Spea_3407 4161475 - 4163517 + | peptidase S9 prolyl oligopeptidase TERM 4788 4163558 - 4163575 + T 100 -12.7 -4.45068 | opp_overlap 4163558 TGCTTAAACTAAAAA GGCTGCC AATT GGCAGCC TTTGTTATTACAGCT TERM 4789 4163575 - 4163558 - T 100 -12.7 -4.98531 | opp_overlap 4163558 TGCTTAAACTAAAAA GGCTGCC AATT GGCAGCC TTTGTTATTACAGCT Spea_3408 4163961 - 4163596 - | hypothetical protein TERM 4790 4166477 - 4166488 + G 73 -2.2 -5.19879 | overlap 4166475 TTTAGCCAAGATATC TGTC GTCA GGCA TTTTTATATTTCCCA TERM 4791 4167749 - 4167773 + G 70 -9.3 -3.34398 | overlap 4167747 GCCTATGAAGCGGCG GCCAATCAAGT GCT GCTAGATTGGC TATTTAGCCGAAACG Spea_3409 4164434 - 4168030 + | hypothetical protein TERM 4792 4168096 - 4168119 + T 82 -6 -4.91109 | gap 1, opp_overlap 4168096 TGATGTAACTAAAAA GCGCTAGTCCA TTT TTG-CTAGCGC TTTTTATCATACCAA TERM 4793 4168119 - 4168096 - T 82 -6 -4.88407 | gap 1, opp_overlap 4168096 TGATGTAACTAAAAA GCGCTAGTCCA TTT TTG-CTAGCGC TTTTTATCATACCAA Spea_3410 4169985 - 4168141 - | hypothetical protein TERM 4794 4170324 - 4170283 - R 100 -18.1 -3.12289 | opp_overlap 4170277 4170297, overlap 4170275 4170297 TAAAACACTGTAAGA TTCAGCCAGCCAAAGCGGG CATG CCCGCTTTGGCTGAGTGAC AGCGAAGTTTATCTC TERM 4795 4170297 - 4170310 + r 79 -9.5 -3.6682 | opp_overlap 4170283 4170275 4170297, overlap 4170277 ATTCAGCCAGCCAAA GCGGG CATG CCCGC TTTGGCTGAGTGACA TERM 4796 4170310 - 4170297 - R 79 -9.5 -3.66999 | opp_overlap 4170297 4170277, overlap 4170283 4170275 ATTCAGCCAGCCAAA GCGGG CATG CCCGC TTTGGCTGAGTGACA Spea_3411 4171519 - 4170443 - | choloylglycine hydrolase Spea_3412 4171620 - 4172660 + | diguanylate cyclase Spea_3413 4172886 - 4173182 + | hypothetical protein TERM 4797 4173237 - 4173266 + T 95 -13.9 -3.69621 | opp_overlap 4173240 4173245, overlap 4173240 4173245 GCTGCTGTCTCGGCA TAATAAAAGGGAA TAAC TTCCCTTTTATTA TTTGAGCTTGTAAAT TERM 4798 4173263 - 4173240 - T 85 -11.2 -3.28712 | opp_overlap 4173237 4173240 4173245, overlap 4173245 GCTGTCTCGGCATAA TAAAAGGGAA TAAC TTCCCTTTTA TTATTTGAGCTTGTA TERM 4799 4173240 - 4173263 + T 90 -11.2 -3.97689 | opp_overlap 4173240 4173245, overlap 4173237 4173245 GCTGTCTCGGCATAA TAAAAGGGAA TAAC TTCCCTTTTA TTATTTGAGCTTGTA TERM 4800 4173258 - 4173245 - T 81 -6.7 -4.77165 | opp_overlap 4173240 4173237 4173245, overlap 4173240 CTCGGCATAATAAAA GGGAA TAAC TTCCC TTTTATTATTTGAGC TERM 4801 4173245 - 4173258 + T 84 -6.7 -5.00196 | opp_overlap 4173245 4173240, overlap 4173240 4173237 CTCGGCATAATAAAA GGGAA TAAC TTCCC TTTTATTATTTGAGC Spea_3414 4174641 - 4173340 - | NADH dehydrogenase TERM 4802 4175032 - 4175020 - H 74 -4.1 -5.04868 | CTAAAGCAAACAAAA GACTA ATT TAGCC GCCCTTTTGAATCAC TERM 4803 4175282 - 4175267 - g 84 -4.8 -5.28176 | overlap 4175272 4175273 TTCACCTAGAAAAAA TTAAAG TGAC CTTTAA CAATGGTCAAACTAA Spea_3415 4175059 - 4175442 + | hypothetical protein Spea_3416 4175610 - 4176134 + | hypothetical protein TERM 4804 4176211 - 4176180 - T 100 -14 -4.36485 | gap 1, opp_overlap 4176186, overlap 4176171 4176186 ATAAAATAGCGAAAA CAACAATGACCACTC AAT GAGTGGTCATT-TTG TTATTAGGCCCAAGT TERM 4805 4176206 - 4176186 - T 100 -14.1 -4.22475 | opp_overlap 4176186, overlap 4176180 4176171 TAGCGAAAACAACAA TGACCACTC AAT GAGTGGTCA TTTTGTTATTAGGCC TERM 4806 4176186 - 4176206 + T 100 -14.1 -4.89477 | opp_overlap 4176186 4176180 4176171 TAGCGAAAACAACAA TGACCACTC AAT GAGTGGTCA TTTTGTTATTAGGCC Spea_3417 4176768 - 4176241 - | putative lipoprotein TERM 4807 4176801 - 4176790 - R 70 -5.8 -4.32649 | ACTCCAAAAATCAAA GGCT AATT AGCC ACTGCCGCTAGTATA Spea_3418 4177684 - 4176899 - | AraC family transcriptional regulator Spea_3419 4177785 - 4179035 + | major facilitator transporter Spea_3420 4180168 - 4179110 - | hypothetical protein Spea_3421 4181288 - 4180221 - | secretion protein HlyD family protein Spea_3422 4181389 - 4182255 + | LysR family transcriptional regulator Spea_3423 4182795 - 4182331 - | GCN5-related N-acetyltransferase TERM 4808 4182842 - 4182864 + r 100 -13.5 -4.45083 | opp_overlap 4182842 TTAGATAATAAAAAA GCCAGTAGC GATAA GCTACTGGC TTTTATCAATATCAA TERM 4809 4182864 - 4182842 - R 100 -13.5 -5.60689 | opp_overlap 4182842 TTAGATAATAAAAAA GCCAGTAGC GATAA GCTACTGGC TTTTATCAATATCAA Spea_3424 4185754 - 4182920 - | TonB-dependent receptor TERM 4810 4183720 - 4183742 + g 91 -7.7 -5.10208 | overlap 4183719 ATGGGTTCCAACCTT CTGGCAAGC CTGAT GCTTGACAG TTTTTCTTACGGTTG TERM 4811 4184283 - 4184306 + g 77 -10.4 -3.40073 | overlap 4184259 TCGATTGACTCTTGA CTTGCTTGGT TTAC ACCAAGTAAG TTCATTGGTACACAT TERM 4812 4185872 - 4185891 + r 70 -2.8 -5.10461 | opp_overlap 4185858, overlap 4185874 ACAGGTTTGTTACCC TGCGTCAA TACT TTGTCGTA TTTTTGTTAACTAAA TERM 4813 4186037 - 4186057 + r 100 -12.6 -4.65895 | opp_overlap 4186037 TCTGTAGATAAAAAA GGCTGCAC AAAAA GTGCAGCC TTTTTAAATGGCAAG TERM 4814 4186057 - 4186037 - R 100 -12.6 -5.36441 | opp_overlap 4186037 TCTGTAGATAAAAAA GGCTGCAC AAAAA GTGCAGCC TTTTTAAATGGCAAG Spea_3425 4187489 - 4186107 - | Na+/H+ antiporter NhaC TERM 4815 4187459 - 4187447 - G 86 -9.1 -4.4261 | TCGCTAACACCAAAA CCACC ACT GGTGG GATAAGACTTAAGGC Spea_3426 4188821 - 4187859 - | hypothetical protein Spea_3427 4189078 - 4190148 + | permease TERM 4816 4190204 - 4190170 - T 70 -7.9 -3.62775 | opp_overlap 4190173 4190173, overlap 4190173 AGTATCTCCTAACAA CTAGCTTGCGAACAT GCTTA ATGCTCGCAAGCTCC CTTAACACTTATTTG TERM 4817 4190173 - 4190201 + T 81 -11.8 -2.5409 | opp_overlap 4190170 4190173, overlap 4190173 ATCTCCTAACAACTA GCTTGCGAACAT GCTTA ATGCTCGCAAGC TCCCTTAACACTTAT TERM 4818 4190201 - 4190173 - T 93 -14 -2.93252 | opp_overlap 4190173 4190173, overlap 4190170 ATCTCCTAACAACTA GCTTGCGAACAT GCTTA ATGCTCGCAAGC TCCCTTAACACTTAT Spea_3428 4191124 - 4190213 - | LysR family transcriptional regulator Spea_3429 4192170 - 4191223 - | LysR family transcriptional regulator TERM 4819 4193150 - 4193118 - g 74 -7 -4.22475 | gap 1, overlap 4193122 GAGGTAAAACAACAA TTCA-CGCTGGCGGC GAAT GCCGTCACCGTTGAA ATGACGCAAGCAGAA TERM 4820 4196257 - 4196224 - g 70 -5.3 -4.46112 | overlap 4196228 4196231 CTGCAGCTAAAGAAA CCAACTACAAGGTTA CCAC TAACCTTGAAGATGC AATGTGTCGAACTCC TERM 4821 4196253 - 4196228 - g 76 -9.1 -3.76486 | overlap 4196224 4196231 AGCTAAAGAAACCAA CTACAAGGTTA CCAC TAACCTTGAAG ATGCAATGTGTCGAA Spea_3430 4192692 - 4197641 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 4822 4197669 - 4197694 + F 100 -14.9 -3.86194 | opp_overlap 4197673, overlap 4197659 4197673 4197683 TCAACGGTTCCAGTA TAAAGGCCTTC ACCT GAAGGCCTTTA TTTATGGCAGGCCTT TERM 4823 4197673 - 4197690 + F 93 -11.3 -4.55295 | opp_overlap 4197673, overlap 4197669 4197659 4197683 CGGTTCCAGTATAAA GGCCTTC ACCT GAAGGCC TTTATTTATGGCAGG TERM 4824 4197690 - 4197673 - f 90 -11.3 -3.96148 | opp_overlap 4197673 4197669 4197659 4197683 CGGTTCCAGTATAAA GGCCTTC ACCT GAAGGCC TTTATTTATGGCAGG TERM 4825 4198095 - 4198059 - g 84 -10.3 -3.97689 | gap 1, opp_overlap 4198064 TATAACCGCAAACAA CACAAGGGGCAAAAGC TGAAGG GCTTT-GCCCCTTTTG ACTATCTGGTACTCG TERM 4826 4198064 - 4198090 + G 87 -9.5 -4.26589 | gap 1, opp_overlap 4198059 CCGCAAACAACACAA GGGGCAAAAGCT GAAG GGC-TTTGCCCC TTTTGACTATCTGGT Spea_3431 4197903 - 4198115 + | hypothetical protein Spea_3432 4198702 - 4198175 - | hypothetical protein Spea_3433 4199619 - 4198741 - | 3'-5' exonuclease Spea_3434 4200309 - 4199710 - | hypothetical protein TERM 4827 4199783 - 4199800 + g 71 -9.9 -3.28842 | overlap 4199781 TAAAAGCCTTGCCAA CCTTGAG TCAT CTCAAGG TATTCATCTTCTCTG Spea_3435 4200542 - 4201819 + | hypothetical protein TERM 4828 4201920 - 4201892 - T 93 -6.8 -5.48213 | gap 1, opp_overlap 4201894 4201917, overlap 4201894 GACTGAAAACAAAAA GAGCCGTAAC-TC AGAG GATGTTACGGCTT TGAAGGCTTAACTCA TERM 4829 4201894 - 4201918 + T 77 -9.4 -3.5774 | gap 1, opp_overlap 4201892 4201894, overlap 4201917 CTGAAAACAAAAAGA GCCGTAAC-TC AGAG GATGTTACGGC TTTGAAGGCTTAACT TERM 4830 4201918 - 4201894 - T 90 -9.4 -4.3613 | gap 1, opp_overlap 4201894 4201917, overlap 4201892 CTGAAAACAAAAAGA GCCGTAAC-TC AGAG GATGTTACGGC TTTGAAGGCTTAACT Spea_3436 4202570 - 4202034 - | hypothetical protein Spea_3437 4203402 - 4202581 - | cytochrome c, putative TERM 4831 4203345 - 4203335 - G 72 -8.2 -3.72893 | opp_overlap 4203335 4203339 4203343 GAGGTTCCCACCAAA GCGG CAC CCGC AGCGGCTGTGCTTAA TERM 4832 4203437 - 4203455 + H 75 -10.4 -3.10464 | TCATTATTTTATTTT GGTCATAA GCC TTATGACC TATTACGGTTAGTAA Spea_3438 4203857 - 4204609 + | winged helix family two component response transcriptional regulator TERM 4833 4204778 - 4204756 - g 83 -9.9 -4.14511 | opp_overlap 4204750 AAGCTTACCGCAAAA CAGCCAAGC TTTAT GCTTAGCTG CAGTTCAGAGCTGTT Spea_3439 4204666 - 4205184 + | hypothetical protein TERM 4834 4205235 - 4205251 + T 77 -6.5 -4.49344 | opp_overlap 4205236, overlap 4205236 TTTAGCGAATAAAAA ACCATGG ACT CCATGGC TTTTCTGCTCACTTT TERM 4835 4205236 - 4205250 + T 77 -10 -3.28522 | opp_overlap 4205236, overlap 4205235 TTAGCGAATAAAAAA CCATGG ACT CCATGG CTTTTCTGCTCACTT TERM 4836 4205250 - 4205236 - T 100 -10 -5.4833 | opp_overlap 4205236 4205235 TTAGCGAATAAAAAA CCATGG ACT CCATGG CTTTTCTGCTCACTT Spea_3440 4206134 - 4205304 - | hypothetical protein TERM 4837 4207043 - 4207025 - g 76 -5.2 -4.75372 | opp_overlap 4207042 ACGAGCCACTAAAAA GCCGTGAC GAC ATCAAGGC AGTATTTGCTAAGTT Spea_3441 4206613 - 4207269 + | DSBA oxidoreductase TERM 4838 4207291 - 4207322 + T 80 -11 -3.36073 | opp_overlap 4207278 4207293 4207299, overlap 4207299 ACCCATTTTGAGAAA TAGAAAAAGGCGCT GATT AGCGCCTTTTTTGA TCTTTACAACCTATC TERM 4839 4207320 - 4207293 - T 88 -11.4 -3.52906 | opp_overlap 4207291 4207299, overlap 4207299 CCATTTTGAGAAATA GAAAAAGGCGCT GATT AGCGCCTTTTTT GATCTTTACAACCTA TERM 4840 4207314 - 4207299 - T 100 -10.4 -5.24799 | opp_overlap 4207291 4207299, overlap 4207293 TGAGAAATAGAAAAA GGCGCT GATT AGCGCC TTTTTTGATCTTTAC TERM 4841 4207299 - 4207314 + T 100 -10.4 -5.32699 | opp_overlap 4207299 4207293, overlap 4207291 TGAGAAATAGAAAAA GGCGCT GATT AGCGCC TTTTTTGATCTTTAC Spea_3442 4208365 - 4207352 - | glycosyl transferase group 1 Spea_3443 4208961 - 4208569 - | hypothetical protein TERM 4842 4210611 - 4210625 + G 75 -11.4 -3.05384 | overlap 4210613 CTCGAACATGTATTG CACCGC GCC GCGGTG TTAGCTCGCGCCCAA Spea_3444 4209369 - 4210919 + | anaerobic nitric oxide reductase transcription regulator Spea_3445 4210948 - 4212420 + | peptidase M16 domain-containing protein TERM 4843 4213009 - 4212954 - g 82 -11.2 -3.59979 | gap 1 CGGCGTCAGCTCAAA TTGGCCAAACACATCAACGCCTACAGC GGC GCCGAAATCGATGATGTG-TGGGCCAA GAAAATCTTGGGTAA TERM 4844 4213116 - 4213132 + G 91 -6.5 -5.55664 | AGAGACAAGATTTTA GCGCAGT CTA ACTGGGC TTTTTTTGCTAATCG Spea_3446 4212420 - 4214021 + | peptidase M16 domain-containing protein Spea_3447 4214219 - 4215232 + | StbA family protein Spea_3448 4215242 - 4215982 + | hypothetical protein TERM 4845 4216039 - 4216021 - T 82 -6 -4.98672 | opp_overlap 4216021, overlap 4216016 CTTAAAAATAGAAAA TCCACC TCGTTAG GGTGGA TTTTTTTGGCTTGAA TERM 4846 4216021 - 4216039 + T 100 -6.7 -5.53288 | opp_overlap 4216016 4216021 CTTAAAAATAGAAAA TCCACCT CGTTA GGGTGGA TTTTTTTGGCTTGAA TERM 4847 4216128 - 4216097 - T 89 -5.8 -5.49234 | AGAGCCAATAAAAAA GCAGAGCCGAGG CCGAATAT CATCAGCCCTGC AAGCTCTGCTCTTTT Spea_3449 4217531 - 4216206 - | D-serine dehydratase TERM 4848 4217203 - 4217216 + g 76 -4.5 -5.03314 | ATAGAACCAGATATT GGCAG ATGG CTGTC TTTTTTCAACATCAG Spea_3450 4218887 - 4217550 - | permease DsdX Spea_3451 4219098 - 4220069 + | DNA-binding transcriptional regulator DsdC TERM 4849 4220272 - 4220253 - f 77 -6.4 -4.59109 | opp_overlap 4220253 4220251 CACACTCGGGAAAAA GGGGATCA ACAG CAATCCCC TCTTTCATCTCCCCT TERM 4850 4220407 - 4220380 - f 72 -8.4 -3.53012 | overlap 4220349 4220344 4220384 TCCTGCCCCGCGAAA GCTACGCCGACA TCCC TGTCGGCATTAC GCGATTTATTCCAAC TERM 4851 4220403 - 4220384 - f 72 -10 -2.64155 | overlap 4220344 4220380 GCCCCGCGAAAGCTA CGCCGACA TCCC TGTCGGCA TTACGCGATTTATTC Spea_3452 4220681 - 4221202 + | ATPase-like protein Spea_3453 4222065 - 4221496 - | hypothetical protein Spea_3454 4222978 - 4222148 - | phage exclusion protein Lit Spea_3455 4223938 - 4223156 - | hypothetical protein Spea_3456 4224530 - 4224105 - | hypothetical protein TERM 4852 4224418 - 4224439 + g 71 -3.7 -4.87008 | gap 1, opp_overlap 4224418 GAAGCATCTTTAACA CCTTTG-GCA ATC TGCACTAAGG TTTCTTTTATGTATT TERM 4853 4224791 - 4224754 - R 91 -10.7 -4.3255 | opp_overlap 4224761, overlap 4224756 CCTGTAACTAATAAA GAGGCAATAGAAGTTAG ATAT CAAACCTCTATTGCCTA AAGTCGTACAACAAT TERM 4854 4224789 - 4224756 - R 95 -13.3 -3.7642 | opp_overlap 4224761, overlap 4224754 TGTAACTAATAAAGA GGCAATAGAAGTTAG ATAT CAAACCTCTATTGCC TAAAGTCGTACAACA Spea_3457 4225207 - 4225001 - | XRE family transcriptional regulator TERM 4855 4225243 - 4225275 + H 71 -6.3 -4.16785 | opp_overlap 4225242 4225260, overlap 4225242 AAGACTATCCAAAGT TGCGGCTTATAAAGC CAC GGATTATAATCCGCA TTTAGTTTGTAATGT TERM 4856 4225492 - 4225471 - g 73 -10.3 -3.07307 | CAAAGTGTTAGTGAA GCCTATAAA TTTA TTTATAGGC AGGTCTGTCGACTCG Spea_3458 4225336 - 4225875 + | hypothetical protein TERM 4857 4226915 - 4226899 - g 71 -3.7 -4.84274 | TAAGTAGAGTAAAAA CCGAA TTATATT TTCGG CAAATACTAGGTCGT Spea_3459 4225881 - 4227299 + | type III restriction protein res subunit Spea_3460 4228266 - 4227454 - | hypothetical protein TERM 4858 4227552 - 4227542 - G 77 -6.8 -4.44284 | AATGGAATATCAAAA GCGA CAT TCGC AAAAGCAGCAATGGC TERM 4859 4228560 - 4228540 - R 72 -9 -3.36557 | AAGTATGGCAATCAA GTATGCGG TAATG CCGCACAC AACCGTGGAGTAGTT Spea_3461 4228884 - 4228606 - | hypothetical protein Spea_3462 4230607 - 4230224 - | hypothetical protein Spea_3463 4232651 - 4230609 - | integrase family protein TERM 4860 4231727 - 4231755 + g 70 -2.3 -5.02074 | overlap 4231709 4231732 4231733 TGAATACGGTTTCGC CAGTTTCTACTCG TTG CGAGTGGCTGTTG TTTTTTAGCGCATAG TERM 4861 4231891 - 4231873 - G 76 -7.4 -4.30844 | AGTTCATTATCAAAA TTACGGCA GGA CGCCGCAA TGATACTGCCAGGAT Spea_3464 4235341 - 4232651 - | hypothetical protein TERM 4862 4233566 - 4233577 + g 74 -5.8 -4.56597 | TGTGTCGCTTCTATA GCCA GCTC TGGC TTTTTGAAGAACAAC Spea_3465 4236721 - 4235342 - | integrase family protein TERM 4863 4237536 - 4237516 - g 72 -6.1 -4.24745 | opp_overlap 4237506 4237516 4237518, overlap 4237503 CAGTAGCAATAGAAA CTGCTGCTT TTG AAACAGCTG CTTTTAATACCGGCA TERM 4864 4237585 - 4237595 + G 74 -8.2 -3.88291 | CGGTGAGTGATGACC CCGC GCG GCGG TTTATCAGCCTCATC Spea_3466 4236894 - 4237751 + | AFG1 family ATPase TERM 4865 4237839 - 4237825 - T 79 -8.6 -4.10781 | AACAACCTAGATAAA TCAAGC TCC GCTTGA TAAAGGTCGTGAGCT Spea_3467 4239269 - 4238253 - | transposase IS116/IS110/IS902 family protein TERM 4866 4239171 - 4239155 - G 75 -2.9 -5.1356 | TTTGAGCAAGAAAAA GCACTAA CTC TTTGCGC TTAATTATCTTCTTT TERM 4867 4239646 - 4239634 - g 72 -4.8 -4.62069 | opp_overlap 4239634 4239636, overlap 4239636 CGGTGAGCCTAAAAA GGTC AAAGA GACC TTGATGCGTTTGGTG Spea_3468 4239548 - 4239817 + | hypothetical protein Spea_3469 4239880 - 4240752 + | hypothetical protein TERM 4868 4240798 - 4240822 + T 100 -14.4 -3.53012 | TCTGATAGCGCGTAA CCTTGTGAGC TTACT GCTCACAAGG TTTACAGCAGAGAAG Spea_3470 4241586 - 4240876 - | hypothet