TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.536542 %AT, 1681329 nt, 9835 terms. Intergenic: 0.567904 %AT, H2T: 193508 nt, 683 terms; T2T: 37566 nt, 450 terms; H2H: 38596 nt, 570 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|148269145|ref|NC_009486.1| Thermotoga petrophila RKU-1, complete genome (length 1823511) Tpet_0001 1394 - 72 - | chromosomal replication initiator protein DnaA TERM 1 204 - 185 - G 73 -7.9 -4.10657 | opp_overlap 184 188, overlap 188 TGACACTGTCTAAAA CAACAGG GTGTGA CCTGTTG AATTTCTCCGCTATC TERM 2 1512 - 1495 - R 95 -12.7 -3.68853 | opp_overlap 1495 TGAAAAATTTCTAAA GGGGTGG AACC CCACCCC TTACTTCACTCTTCC TERM 3 1495 - 1512 + r 90 -12.7 -3.406 | opp_overlap 1495 TGAAAAATTTCTAAA GGGGTGG AACC CCACCCC TTACTTCACTCTTCC Tpet_0002 2567 - 1518 - | tRNA (guanine-N(7)-)-methyltransferase Tpet_0003 3418 - 2558 - | radical SAM domain-containing protein TERM 4 3454 - 3433 - R 72 -5.8 -4.57073 | CAGCCTCTTCAAAAA GTACTCGG CGTCGT CCGCGTAC TCACTATCTGGGAAG Tpet_0004 4548 - 3415 - | TPR repeat-containing protein Tpet_0005 6041 - 4545 - | carbohydrate kinase, YjeF related protein TERM 5 5132 - 5144 + g 78 -4.8 -5.08178 | opp_overlap 5125, overlap 5123 5136 CCTGAAGATTCTGCA GGCT GAAGA AGCC TTTTTCTGTATCTAT Tpet_0006 6510 - 6046 - | lytic transglycosylase, catalytic Tpet_0007 7586 - 6507 - | iron-containing alcohol dehydrogenase TERM 6 7198 - 7214 + g 72 -3 -5.05601 | gap 1, opp_overlap 7196, overlap 7196 7198 7199 GGTATCTCCACAACT G-GAAGC CAGT GCTTCAC TTTTTCTCTATCGTA TERM 7 7232 - 7250 + g 79 -3.2 -5.27335 | TTTCTCTATCGTACA GATCTT CAACGGA AAGATC TTTTTCTTTCAAAAG Tpet_0008 8013 - 7597 - | OsmC family protein TERM 8 7899 - 7932 + g 95 -13.1 -4.22214 | opp_overlap 7890 7901 TGAGAACGAGCTCAA GAGGTCGGGGAGCAG CGTC CTTTCCCCCGACCTC TTCTTTTGCATCCAT TERM 9 7930 - 7901 - G 70 -9.9 -3.08283 | opp_overlap 7899, overlap 7890 AGAACGAGCTCAAGA GGTCGGGGAGCAG CGTC CTTTCCCCCGACC TCTTCTTTTGCATCC Tpet_0009 10008 - 8023 - | methyl-accepting chemotaxis sensory transducer Tpet_0010 10972 - 10043 - | phosphate transporter TERM 10 10281 - 10295 + g 74 -5.8 -4.57073 | opp_overlap 10281 AGAGAAGTAAAGTGA TCTAAT TCT ATTAGA TTTTTCCCCACCGTC TERM 11 10848 - 10861 + g 81 -8.1 -4.52857 | overlap 10847 ATCACGAAAATGCTC GCCAC CATG GTGGC TTTTCTGTAAGAAAT TERM 12 11209 - 11230 + H 100 -11.5 -5.71712 | opp_overlap 11195, overlap 11210 ACCCCCCACGGCCTT GGCGGGCTC GAAA GAGCCCGCA TTTTTTTGTATAAAA TERM 13 11210 - 11229 + H 100 -15 -4.01943 | opp_overlap 11195, overlap 11209 CCCCCCACGGCCTTG GCGGGCTC GAAA GAGCCCGC ATTTTTTTGTATAAA Tpet_0011 11313 - 12167 + | hypothetical protein TERM 14 12688 - 12704 + GF 70 -6.5 -4.16146 | opp_overlap 12675 AAGAATGGAGTTTTG CCCATCC ACC GGATGAG TTTTGAACCTGTTTT Tpet_0012 12154 - 12870 + | ribonuclease H TERM 15 12939 - 12925 - gf 73 -2.8 -5.07107 | CAAACTCTTAAAAAA GTATCT TGA AGATGC TGACGATATCGAGTC Tpet_0013 12821 - 13462 + | hypothetical protein Tpet_0014 13464 - 14231 + | MazG family protein Tpet_0015 14228 - 15217 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 16 15663 - 15649 - g 72 -5.7 -4.4009 | overlap 15652 GCTCAGCTCATAAAA GATGG ATCGA CCATC CTCACTCACTGCAAC Tpet_0016 15214 - 16245 + | aIF-2BI family translation initiation factor TERM 17 16624 - 16614 - gf 73 -4.6 -4.78597 | TGAAGAAGAAACAAA CCCC ACG GGAG AATTGGTTTATTTTA Tpet_0017 16249 - 17019 + | flagellar biosynthetic protein FliR TERM 18 17123 - 17095 - gf 73 -10.3 -2.98453 | overlap 17094 17098 GAGTAAGAGAAGAAG GTAGAGCTCCC GTATCCA GGGAGCTCAAC ATGGCCGTCACCTTT TERM 19 17120 - 17098 - gf 74 -10.6 -2.71335 | overlap 17095 17094 TAAGAGAAGAAGGTA GAGCTCCC GTATCCA GGGAGCTC AACATGGCCGTCACC Tpet_0018 16950 - 18074 + | flagellar biosynthetic protein FlhB TERM 20 19031 - 19013 - g 72 -8.8 -3.61398 | GCCGTTCCTCAAGAA GAGCTGGT GGG ACCTGCTC CTGCAGAAAGACCCG TERM 21 19210 - 19193 - g 95 -11.3 -4.4648 | opp_overlap 19204 ACTTCCATCAGAAAA CAGCTCG CGTT CGAGCTG GGACTCGTCGTTTCC TERM 22 19968 - 19958 - g 75 -3.2 -5.16237 | AATCTGATGAAAAAA GGCT ATC AACC TGTGATTGTGTGTTC Tpet_0019 18071 - 20107 + | flagellar biosynthesis protein FlhA flhF 20104 - 21240 + | flagellar biosynthesis regulator FlhF Tpet_0021 21206 - 22033 + | cobyrinic acid a,c-diamide synthase Tpet_0022 22040 - 22729 + | type IV pilus assembly PilZ Tpet_0023 22726 - 23340 + | CheC, inhibitor of MCP methylation TERM 23 23609 - 23595 - g 71 -7 -4.05402 | opp_overlap 23594 23595 CTGGAAGCAAAAATA GCGGGC GGA GCCAGC ATGTTTGAATCTACG Tpet_0024 23337 - 23810 + | chemoreceptor glutamine deamidase CheD Tpet_0025 23828 - 24472 + | RNA polymerase, sigma 28 subunit, FliA/WhiG Tpet_0026 24456 - 24761 + | hypothetical protein Tpet_0027 24758 - 25240 + | hypothetical protein TERM 24 25702 - 25673 - g 95 -2.9 -6.02914 | gap 1, opp_overlap 25674, overlap 25675 25678 TCGACAGAAAAAAAA TA-GAAGGAGCACT GAA AGTGCTCCTGAATA GTCTGAAAGATAGAA TERM 25 25699 - 25675 - g 80 -7.1 -4.65669 | opp_overlap 25674, overlap 25673 25678 GACAGAAAAAAAATA GAAGGAGCACT GAA AGTGCTCCTGA ATAGTCTGAAAGATA TERM 26 25696 - 25678 - g 95 -13.2 -4.36984 | opp_overlap 25674, overlap 25675 25673 AGAAAAAAAATAGAA GGAGCACT GAA AGTGCTCC TGAATAGTCTGAAAG Tpet_0028 25225 - 25890 + | hypothetical protein Tpet_0029 26104 - 25874 - | hypothetical protein Tpet_0030 26379 - 26104 - | stage V sporulation protein S Tpet_0031 27453 - 26443 - | galactose-1-phosphate uridylyltransferase TERM 27 27400 - 27419 + g 74 -3.5 -4.91511 | CCTTTTCGCTCTCTC GGTGGCT ATGATA ACCCACC TTTTTATAATGGGAT Tpet_0032 28918 - 27458 - | glycogen/starch synthase, ADP-glucose type TERM 28 28015 - 28026 + g 71 -7.2 -4.07618 | GTCTGCTTATCAACC CGGC TACA GCCG TTTCCTTGTTAACGG Tpet_0033 29544 - 28915 - | beta-lactamase domain-containing protein TERM 29 29120 - 29108 - G 73 -4.1 -4.79352 | GTATCGAGAAGAAAA GAAAG GTG CTCTC TGGCGTGCCATGGGG TERM 30 29134 - 29146 + g 76 -7.7 -4.35327 | TCTGGCGTGCCATGG GGTGT GAA ACACC TTTACTTTTTCATCG Tpet_0034 30264 - 29551 - | bacitracin resistance protein BacA TERM 31 29865 - 29850 - G 82 -6.8 -4.90217 | GAAAGAGAGCAAAAA GCTGGG CAAT CCCAAC AAGAAGGGCATCGAG Tpet_0035 30871 - 30266 - | CBS domain-containing protein TERM 32 30846 - 30856 + g 87 -6.8 -5.22943 | ACCATCGGGAAGTCC TGGG TGA CCCA TTTTTTGACTTTCAT Tpet_0036 31902 - 30868 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Tpet_0037 33404 - 31899 - | peptidase M50 TERM 33 33141 - 33159 + g 81 -5.3 -5.10033 | overlap 33132 33131 33153 AAATCTCTGCCAAGC GGGTTTC GCGTA GAAACTC TTTTCTTTCTCTTCC Tpet_0038 34510 - 33380 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 34 33491 - 33501 + g 74 -5.4 -4.61868 | opp_overlap 33491, overlap 33484 TGGATATCCTTGAAA CTCT TCG AGAG TTTTCTCTATCACTC TERM 35 33756 - 33770 + g 71 -10 -3.13919 | overlap 33758 GGTATTCTCATATCC GGTGGT GAT ACCACC ATTTTGACGTTTCCA TERM 36 33758 - 33771 + g 72 -6.7 -4.24404 | overlap 33756 TATTCTCATATCCGG TGGTG ATAC CACCA TTTTGACGTTTCCAT TERM 37 34337 - 34349 + g 72 -4.8 -4.67234 | GAACTCCACATCACC CGTG ACCGC CACG TTTTTCACGTTGAAT Tpet_0039 35097 - 34489 - | thiamine pyrophosphokinase Tpet_0040 35162 - 35572 + | methylated-DNA--protein-cysteine methyltransferase Tpet_0041 35569 - 37500 + | glycosyl transferase family protein TERM 38 37662 - 37689 + G 79 -10.6 -3.53012 | gap 1, opp_overlap 37662 TCCGGAAGACATGAA GCTCGTTGTGGTG ACA CACCAC-GCGGGC TTTGAAGAACCCGAC Tpet_0042 37504 - 38061 + | hypothetical protein Tpet_0043 39370 - 38027 - | radical SAM domain-containing protein Tpet_0044 40122 - 39367 - | pantothenate kinase TERM 39 39403 - 39429 + g 74 -5.8 -4.55673 | overlap 39406 GTACACCCCCTTGAT CGTGAGGTCCTC ATC GAAGATCTCGTG TTTTATCATATCTTT TERM 40 39619 - 39593 - G 80 -6.6 -4.77165 | opp_overlap 39592 TTTCCTACAACAAAA TCCGCTGGTT TTACCTC AACGAGCGGA AGTTTTGCCGTTCCC Tpet_0045 40243 - 41535 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Tpet_0046 41540 - 42454 + | homoserine O-succinyltransferase TERM 41 42453 - 42475 + F 100 -16.4 -4.74706 | opp_overlap 42456 42459 TGGAAGACATACACT GAAGAACCCC TTC GGGGTTCTTC TTTTTCCATGTTAAA TERM 42 42472 - 42456 - f 86 -12.3 -3.18913 | opp_overlap 42453, overlap 42459 AAGACATACACTGAA GAACCCC TTC GGGGTTC TTCTTTTTCCATGTT TERM 43 42469 - 42459 - f 71 -8.2 -3.72632 | opp_overlap 42453, overlap 42456 ACATACACTGAAGAA CCCC TTC GGGG TTCTTCTTTTTCCAT TERM 44 43494 - 43477 - g 82 -6.9 -4.82863 | opp_overlap 43477, overlap 43478 GAAGGATAAAATAAA CCCGCTC ATAG GAGCGGC TGGTGTTTCTGCCGT TERM 45 43493 - 43478 - g 79 -10.4 -3.48091 | opp_overlap 43477, overlap 43477 AAGGATAAAATAAAC CCGCTC ATAG GAGCGG CTGGTGTTTCTGCCG Tpet_0047 42530 - 43654 + | sodium ion-translocating decarboxylase, beta subunit Tpet_0048 43666 - 43863 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpet_0049 43865 - 45010 + | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha Tpet_0050 45066 - 46355 + | phosphopyruvate hydratase TERM 46 46387 - 46356 - f 79 -9.4 -3.80279 | opp_overlap 46359 46360, overlap 46358 46359 46363 TCTATAAAGAGATAA CACCGAAGGCCCAC CTTG GTGGGCCTTCATTT TGTTGAGGTGATTTC TERM 47 46385 - 46358 - f 88 -12 -3.47615 | opp_overlap 46359 46360, overlap 46356 46359 46363 TATAAAGAGATAACA CCGAAGGCCCAC CTTG GTGGGCCTTCAT TTTGTTGAGGTGATT TERM 48 46359 - 46384 + F 100 -13.3 -4.66318 | opp_overlap 46358 46356 46359 46363, overlap 46360 ATAAAGAGATAACAC CGAAGGCCCAC CTTG GTGGGCCTTCA TTTTGTTGAGGTGAT TERM 49 46384 - 46359 - f 93 -15.5 -2.67485 | opp_overlap 46359 46360, overlap 46358 46356 46363 ATAAAGAGATAACAC CGAAGGCCCAC CTTG GTGGGCCTTCA TTTTGTTGAGGTGAT TERM 50 46360 - 46383 + F 100 -16.8 -3.39068 | opp_overlap 46359 46358 46356 46363, overlap 46359 TAAAGAGATAACACC GAAGGCCCAC CTTG GTGGGCCTTC ATTTTGTTGAGGTGA TERM 51 46380 - 46363 - f 86 -12.7 -3.23585 | opp_overlap 46360 46359, overlap 46359 46358 46356 AGAGATAACACCGAA GGCCCAC CTTG GTGGGCC TTCATTTTGTTGAGG Tpet_0051 46406 - 47326 + | cation diffusion facilitator family transporter Tpet_0052 47323 - 47799 + | hypothetical protein Tpet_0053 47809 - 48429 + | peptidase M22, glycoprotease TERM 52 48435 - 48422 - T 100 -9.5 -5.55855 | opp_overlap 48422 GGGAAAAAAAGAAAA GGGGC TAAC GCCCC TTACTGAACCTTCTC TERM 53 48422 - 48435 + T 72 -9.5 -3.17219 | opp_overlap 48422 GGGAAAAAAAGAAAA GGGGC TAAC GCCCC TTACTGAACCTTCTC Tpet_0054 50814 - 48436 - | ATPase TERM 54 49353 - 49363 + g 74 -5.4 -4.67038 | overlap 49347 GGATTATCTCTTCGA GCTT CAG AAGC TTTTCCTTTTCAGAC Tpet_0055 51070 - 51969 + | S-adenosyl-methyltransferase MraW TERM 55 52135 - 52124 - g 89 -5.8 -5.77677 | CAAAACAATAAAAAA CTCG AAAT CGAG ATCAAAGAACTGGAA Tpet_0056 52037 - 52225 + | hypothetical protein TERM 56 52261 - 52273 + G 79 -7.7 -4.49314 | overlap 52245 GTTGTGGCTGTTGCT CGCAA TCT TTGCG TTATTTTTGATGGTC TERM 57 53638 - 53652 + G 74 -3.5 -5.02074 | CAGGAATCTCTATCA CTCAC TTTTT GTGGG TTTTTTCCCCGCTGA TERM 58 53932 - 53900 - g 100 -11.4 -4.81644 | gap 1 GAAATAAAAGGAAAA GGGTGGAAGGTGTCT GAAC AAACACC-CCCACCC AATCATCCTCTTGAA Tpet_0057 52235 - 53983 + | peptidoglycan glycosyltransferase Tpet_0058 54927 - 53974 - | thioredoxin reductase Tpet_0059 55599 - 54934 - | glutaredoxin-like domain-containing protein Tpet_0060 56111 - 55629 - | hypothetical protein Tpet_0061 57025 - 56108 - | band 7 protein Tpet_0062 57461 - 57039 - | hypothetical protein Tpet_0063 58316 - 57474 - | ribonuclease Z Tpet_0064 58762 - 58313 - | ribosomal protein L9 Tpet_0065 58845 - 59912 + | glucose-1-phosphate thymidyltransferase TERM 59 59917 - 59935 + T 100 -14.6 -4.12603 | opp_overlap 59917 TGGAACTTTAAAAAA GAGGGGCT TTG AGCCCCTC TTATTGTTTCGTCCA TERM 60 59935 - 59917 - T 100 -14.6 -5.09426 | opp_overlap 59917 TGGAACTTTAAAAAA GAGGGGCT TTG AGCCCCTC TTATTGTTTCGTCCA Tpet_0066 60817 - 59936 - | protein-export membrane protein SecF Tpet_0067 62211 - 60814 - | protein-export membrane protein SecD TERM 61 61627 - 61606 - G 74 -10.3 -3.186 | opp_overlap 61604, overlap 61604 GAACACATCAACATA CTCTTTTGA AAGC TCAAAAGAG ACCTTGTAGCCGTAT Tpet_0068 62565 - 62215 - | preprotein translocase, YajC subunit Tpet_0069 63058 - 62558 - | hypothetical protein TERM 62 62871 - 62846 - G 70 -4.7 -4.41609 | opp_overlap 62849, overlap 62849 TATCATAAAGAGAAA CATTGGAAATG GTGG CATTCCCATCG TTAAAAACGAAAGAA Tpet_0070 63947 - 63066 - | riboflavin biosynthesis protein RibF TERM 63 63749 - 63730 - G 83 -6.4 -5.03314 | overlap 63731 TTTATTCTGAAAAAA TCCAGAAC AACG GTTCTGGC GTAGCGAGAGAGCAT TERM 64 63748 - 63731 - G 75 -9.9 -3.61506 | overlap 63730 TTATTCTGAAAAAAT CCAGAAC AACG GTTCTGG CGTAGCGAGAGAGCA Tpet_0071 64882 - 63953 - | tRNA pseudouridine synthase B Tpet_0072 65274 - 64879 - | ribosome-binding factor A Tpet_0073 66144 - 65287 - | metal dependent phosphohydrolase TERM 65 65884 - 65874 - GR 74 -6.8 -4.2803 | opp_overlap 65874 TATCGTAAGTGAAAA CGCT GAG AGCG AGATTTCTCACCGTT Tpet_0074 67594 - 66113 - | histidine kinase TERM 66 67063 - 67075 + gr 72 -2.7 -4.99645 | overlap 67057 TCTCTTCTTTGAACT TTTCA TTC TGGAA TTTTATTTCTCCACT Tpet_0075 68609 - 67602 - | Sua5/YciO/YrdC/YwlC family protein TERM 67 68543 - 68525 - G 95 -13.2 -3.68359 | opp_overlap 68520 68540, overlap 68519 TGGGGAAAATGATAA CTTCTCCG TTC CGGAGAAG CTCGACTGCTTCTTT TERM 68 68660 - 68643 - H 100 -12.7 -4.84146 | opp_overlap 68642 ATGATACAAAATAAA GGGGCTC TCTG GAGCCCC CTGTGGTGCCGAGGG TERM 69 69000 - 68985 - g 95 -3.2 -5.8901 | overlap 68986 ATAGAAAACAAAAAA CCCGTG AGCT CACAGA GAGTTCTGGAAGTGA TERM 70 69089 - 69063 - g 73 -2.3 -5.2422 | AACGATATGAAAAAA CTGGAATATCT TGGAT ACATATACCAG CCCCACACATCAGCA Tpet_0076 68880 - 69896 + | heat-inducible transcription repressor HrcA TERM 71 70153 - 70133 - g 73 -9.7 -3.42437 | overlap 70131 70135 CAAGGGGAAAAGAGA GACGCCTTC TAT GAAGGCGTG AAAATGATATACAAA TERM 72 70151 - 70135 - g 81 -12.3 -3.27181 | overlap 70133 70131 AGGGGAAAAGAGAGA CGCCTTC TAT GAAGGCG TGAAAATGATATACA Tpet_0077 69902 - 70420 + | GrpE protein TERM 73 70415 - 70400 - f 82 -7.6 -4.63542 | opp_overlap 70390, overlap 70390 70387 GAGAAGGTTGAAAAA CCTTCT GACG AGAAGG AGTGATGAATCATGA TERM 74 70979 - 70993 + G 74 -8.6 -4.01419 | opp_overlap 70979 GGAAGGATCAGAGAA GAACGA AGA TCGTTC TTTGGTTACTTCGTC TERM 75 71259 - 71249 - g 87 -6.8 -5.1287 | opp_overlap 71249 CCTAGATTCAAAAAA TCCG GTT CGGA TCTCGTGTACGATGT TERM 76 71503 - 71492 - g 70 -2.2 -4.98061 | AGAGAGGAAAGAAAA GTCC TTGA AGAC CTGGCGAAAAAACGC Tpet_0078 70427 - 71536 + | chaperone protein DnaJ TERM 77 71527 - 71516 - T 72 -3.6 -5.0133 | GACCTGGCGAAAAAA CGCG GGGT CACG ATCGGTTAACGTTTG Tpet_0079 72624 - 71533 - | GTP-binding protein, HSR1-related Tpet_0080 73538 - 72636 - | GTP-binding protein Era TERM 78 73344 - 73370 + g 72 -10.3 -2.87026 | AAGTCTGTGAAGAGG TTTGTGGATAC CGGGA GTGTCCACAAA TATGATCTGGCTATC Tpet_0081 73926 - 73528 - | cytidine deaminase TERM 79 73664 - 73676 + gr 76 -6.2 -4.52857 | opp_overlap 73664, overlap 73661 ACCTGTCTGCAAGCA CCGC ATGGA GCGG TTTTATCTGAAGAAT Tpet_0082 75232 - 73865 - | hypothetical protein Tpet_0083 75704 - 75249 - | hypothetical protein Tpet_0084 76615 - 75701 - | glutamate formiminotransferase Tpet_0085 77373 - 76612 - | response regulator receiver protein TERM 80 77250 - 77272 + g 72 -2.6 -5.0133 | overlap 77247 77251 TCTTTTCGCGGCGAA GGAGCGTGAA CGC TTCCTGCTCG TTTTTTGCCCAAATC Tpet_0086 78782 - 77412 - | PEGA domain-containing protein TERM 81 78160 - 78177 + g 73 -7.7 -4.13995 | GTTCCTTCGTCCACT GATACCG TGAC CGGTGTC TTTCCTTTGTAAGAA TERM 82 78478 - 78492 + g 84 -5 -5.43487 | CTGAGAGAGTAGGTG GATTTC GAA GGAATC TTTTTTATCTCATTT Tpet_0087 79446 - 78799 - | hypothetical protein TERM 83 79191 - 79201 + g 74 -6.8 -4.27443 | opp_overlap 79173, overlap 79191 TCTCCCCCGCAGCCG CGAC GAA GTCG TTGTTTTGCTCATAG Tpet_0088 80505 - 79495 - | cell cycle protein Tpet_0089 81777 - 80572 - | S-layer-like domain-containing protein TERM 84 81670 - 81699 + g 73 -4.3 -4.84918 | opp_overlap 81677, overlap 81672 81677 AAGATTCACAACAAG AATAAAATTCGCC CTGC GGCGAATTCTGTC TTTTCTGTTTCTGAA TERM 85 81672 - 81697 + g 71 -6.9 -4.03253 | opp_overlap 81677, overlap 81670 81677 GATTCACAACAAGAA TAAAATTCGCC CTGC GGCGAATTCTG TCTTTTCTGTTTCTG TERM 86 81677 - 81692 + g 77 -9 -3.87562 | opp_overlap 81677, overlap 81672 81670 ACAACAAGAATAAAA TTCGCC CTGC GGCGAA TTCTGTCTTTTCTGT TERM 87 81692 - 81677 - G 100 -9 -5.01823 | opp_overlap 81677 81672 81670 ACAACAAGAATAAAA TTCGCC CTGC GGCGAA TTCTGTCTTTTCTGT Tpet_0090 83477 - 81774 - | type II secretion system protein E TERM 88 81855 - 81866 + g 70 -2.2 -5.08824 | GGCATCCTGGAACAT GGTG CGCA TACC TTTTTTCACTGCGAG TERM 89 82268 - 82282 + g 71 -7.1 -4.19483 | opp_overlap 82261 TGAGGGAAGCTTCCA CCGCA AGCTG TGCGG TTTCTCTGTCTCTGA Tpet_0091 84532 - 83477 - | cell division protein FtsZ Tpet_0092 85799 - 84549 - | cell division protein FtsA Tpet_0093 86355 - 85801 - | hypothetical protein Tpet_0094 88268 - 86358 - | DNA gyrase, B subunit Tpet_0095 88554 - 88249 - | Zn-ribbon-containing protein Tpet_0096 89372 - 88551 - | aminotransferase, class IV Tpet_0097 90636 - 89332 - | MiaB-like tRNA modifying enzyme TERM 90 90532 - 90555 + gr 81 -6 -4.91459 | opp_overlap 90527 GTAAGAAACATCCCC GTCGGGTA AAACCACG TACCCGGC TTTTTCTAACTGTTC Tpet_0098 91085 - 90633 - | CBS domain-containing protein TERM 91 90817 - 90830 + g 73 -2.4 -5.10933 | opp_overlap 90815 90814 90817, overlap 90815 TTGTTCATAAAATCA GACA CGGGTC TGTC TTTTATTTTGACTAC Tpet_0099 92045 - 91086 - | ribokinase-like domain-containing protein Tpet_0100 92779 - 92075 - | ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components-like protein TERM 92 92596 - 92612 + gr 74 -9.5 -3.28001 | opp_overlap 92594 CACTTCTGGAAATCT CGTTGAA TAT TTCAACG TTCAATTTGACGATA Tpet_0101 92918 - 92748 - | hypothetical protein Tpet_0102 93046 - 94017 + | radical SAM domain-containing protein TERM 93 94293 - 94275 - g 82 -7.4 -4.65263 | overlap 94279 94280 ACCTCGCAAAAGAAA GACATCCC ATG GTGATGTC ATGGGTGAACGTTTT Tpet_0103 94100 - 95548 + | radical SAM domain-containing protein TERM 94 95606 - 95589 - g 100 -3.4 -6.25741 | AAACAAGAAAAAAAA TCCTCG AAGCGG CAAGGA AAGCATTCTCAAAAT Tpet_0104 95564 - 96136 + | TetR family transcriptional regulator TERM 95 96147 - 96120 - T 84 -9.8 -4.19238 | opp_overlap 96121 96122 96125, overlap 96122 96125 TGCTCAATGTGAAAA CAGAAGAGGGGC GTTA GCCCCTCTTCAT CTTAATCTCAGAATC TERM 96 96121 - 96146 + T 91 -13.3 -3.1978 | opp_overlap 96120 96122 96125, overlap 96122 96125 GCTCAATGTGAAAAC AGAAGAGGGGC GTTA GCCCCTCTTCA TCTTAATCTCAGAAT TERM 97 96122 - 96145 + T 100 -16.8 -2.51547 | opp_overlap 96122 96120 96125, overlap 96121 96125 CTCAATGTGAAAACA GAAGAGGGGC GTTA GCCCCTCTTC ATCTTAATCTCAGAA TERM 98 96145 - 96122 - T 100 -16.8 -3.69618 | opp_overlap 96121 96122 96125, overlap 96120 96125 CTCAATGTGAAAACA GAAGAGGGGC GTTA GCCCCTCTTC ATCTTAATCTCAGAA TERM 99 96142 - 96125 - T 100 -12.7 -3.97108 | opp_overlap 96122 96121 96125, overlap 96122 96120 AATGTGAAAACAGAA GAGGGGC GTTA GCCCCTC TTCATCTTAATCTCA TERM 100 96125 - 96142 + T 90 -12.7 -3.40907 | opp_overlap 96125 96122 96120, overlap 96122 96121 AATGTGAAAACAGAA GAGGGGC GTTA GCCCCTC TTCATCTTAATCTCA Tpet_0105 98521 - 96155 - | phenylalanyl-tRNA synthetase, beta subunit TERM 101 96695 - 96710 + g 76 -4.7 -4.7878 | GAGAATTCCTTTGGT CGTGT AGAAGG ACACG TTTCTTTTATCGGTG Tpet_0106 99514 - 98537 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 102 99296 - 99310 + g 81 -5 -5.12474 | TTGGATTTGCTGTCT CTTTTC TTC GAAGAG TTTTTCTATCTTCTC TERM 103 99591 - 99578 - R 75 -9.5 -3.42354 | opp_overlap 99557 GACTCGAACCCACAA GGGCC TCAC GGCCC ACCGGTTTTCGAGAC Tpet_0107 100850 - 99663 - | iron-containing alcohol dehydrogenase Tpet_0108 102088 - 100889 - | uracil-xanthine permease TERM 104 102108 - 102149 + r 81 -6.1 -4.93595 | gap 1, opp_overlap 102114 102118, overlap 102113 102118 ACACCTCCTGACATT TA-AAAATAAAGGCTCTTTG AAT CAAAGAGCCTTCAGTTTCTG TTTTTCAATTTTTCT TERM 105 102113 - 102143 + r 89 -9.8 -4.56791 | opp_overlap 102114 102118, overlap 102108 102118 TCCTGACATTTAAAA ATAAAGGCTCTTTG AAT CAAAGAGCCTTCAG TTTCTGTTTTTCAAT TERM 106 102142 - 102114 - R 100 -15.5 -4.70659 | opp_overlap 102113 102108 102118, overlap 102118 CCTGACATTTAAAAA TAAAGGCTCTTTG AAT CAAAGAGCCTTCA GTTTCTGTTTTTCAA TERM 107 102138 - 102118 - R 100 -14.1 -4.89966 | opp_overlap 102113 102108 102118, overlap 102114 ACATTTAAAAATAAA GGCTCTTTG AAT CAAAGAGCC TTCAGTTTCTGTTTT TERM 108 102118 - 102138 + r 100 -14.1 -3.40392 | opp_overlap 102118 102114, overlap 102113 102108 ACATTTAAAAATAAA GGCTCTTTG AAT CAAAGAGCC TTCAGTTTCTGTTTT Tpet_0109 102871 - 102140 - | WecB/TagA/CpsF family glycosyl transferase TERM 109 102435 - 102451 + g 70 -5.1 -4.40561 | CTTCTGTTTATATCT TCAACGA TTT TCGGTGA TTCTTTTTCGGAGAA TERM 110 102893 - 102911 + r 93 -11.7 -3.99324 | opp_overlap 102893 TTCCTCCAAAAAAAA GCGGAGG GAAGA CCTCCGC TTTCTGCTGGTGCCG TERM 111 102911 - 102893 - R 100 -11.7 -5.75342 | opp_overlap 102893 TTCCTCCAAAAAAAA GCGGAGG GAAGA CCTCCGC TTTCTGCTGGTGCCG Tpet_0110 105073 - 103049 - | RND efflux transporter TERM 112 104427 - 104417 - G 85 -6.8 -4.96388 | AACCATCAAAGAAAA GAGC GCT GCTC TGAAGGATCTCAGCT TERM 113 104784 - 104796 + g 74 -3.4 -5.00884 | GGACTCATAACACTC GAGA TGTCT TCTC TTTTTTCCAGAGCCT Tpet_0111 105503 - 105075 - | MarR family transcriptional regulator TERM 114 105194 - 105178 - G 75 -9.5 -3.64984 | opp_overlap 105176 105187, overlap 105176 ACACTTTTCAAAAGA CTTTCGA AGT TCGAAAG AATCTCTTCGAAGAT Tpet_0112 105725 - 106429 + | hypothetical protein TERM 115 106760 - 106772 + G 72 -4.7 -4.59853 | GATGCTCTTTGGAAT GGCAG ACA CCGCC TTTTTGGGACATTAC TERM 116 107743 - 107756 + G 72 -5.3 -4.72986 | opp_overlap 107743 TCCCCGTCAAGATAA TTGGA CTCT TCCAA TTTTTCCTCGCAATA Tpet_0113 106638 - 108032 + | MATE efflux family protein Tpet_0114 109132 - 108038 - | N-acetylglucosamine-6-phosphate deacetylase Tpet_0115 110135 - 109143 - | glutamine--fructose-6-phosphate transaminase (isomerizing) Tpet_0116 110964 - 110149 - | binding-protein-dependent transport systems inner membrane component Tpet_0117 111859 - 110957 - | binding-protein-dependent transport systems inner membrane component TERM 117 111875 - 111904 + r 100 -9.2 -5.67283 | opp_overlap 111879, overlap 111878 111879 TCTCTCTCTCCTTTC GAAAGGGAGGGG GACACA CCCCTCCCCATC TTTTTTATTTCGATT TERM 118 111878 - 111901 + r 72 -9.5 -3.25791 | opp_overlap 111879, overlap 111875 111879 CTCTCTCCTTTCGAA AGGGAGGGG GACACA CCCCTCCCC ATCTTTTTTATTTCG TERM 119 111900 - 111879 - R 100 -13 -3.53012 | opp_overlap 111878 111875 111879 TCTCTCCTTTCGAAA GGGAGGGG GACACA CCCCTCCC CATCTTTTTTATTTC TERM 120 111879 - 111900 + r 84 -13 -2.53848 | opp_overlap 111879, overlap 111878 111875 TCTCTCCTTTCGAAA GGGAGGGG GACACA CCCCTCCC CATCTTTTTTATTTC Tpet_0118 113171 - 111909 - | extracellular solute-binding protein TERM 121 112539 - 112550 + g 76 -4.4 -4.94147 | GTATTCCGGTCTGTC GAAG AGCA CTTC TTTTATTCTGTTGTT Tpet_0119 114571 - 113168 - | glycoside hydrolase family 3 protein TERM 122 113327 - 113339 + g 79 -7.7 -4.44548 | overlap 113318 CGGAAGGCTCAGATG GGCTT TCA AAGCC TTTTCGTTCGGTATG Tpet_0120 115631 - 114579 - | ROK family protein TERM 123 114855 - 114823 - G 71 -7.7 -3.95148 | overlap 114826 114831 AGATAGCTAACGAAA GAAGCAACCTCCGAA AGC TTCGAAAGAAGCTTC AAGAGTGAATCGGAA TERM 124 115763 - 115796 + r 76 -5.4 -4.82111 | gap 2, opp_overlap 115768, overlap 115765 115766 115767 TAAGGAGGGAAAAAC GAAA--AGGTGGCTCC AGAA GGAGCCACCCGCTTTC TTGTTTTTATTTTCT TERM 125 115765 - 115792 + r 76 -5.4 -4.8245 | opp_overlap 115768, overlap 115763 115766 115767 AGGAGGGAAAAACGA AAAGGTGGCTCC AGAA GGAGCCACCCGC TTTCTTGTTTTTATT TERM 126 115766 - 115791 + r 73 -8.9 -3.4581 | opp_overlap 115768, overlap 115765 115763 115767 GGAGGGAAAAACGAA AAGGTGGCTCC AGAA GGAGCCACCCG CTTTCTTGTTTTTAT TERM 127 115767 - 115790 + r 81 -12.4 -2.65046 | opp_overlap 115768, overlap 115766 115765 115763 GAGGGAAAAACGAAA AGGTGGCTCC AGAA GGAGCCACCC GCTTTCTTGTTTTTA TERM 128 115789 - 115768 - R 100 -15.9 -4.78661 | opp_overlap 115767 115766 115765 115763 AGGGAAAAACGAAAA GGTGGCTCC AGAA GGAGCCACC CGCTTTCTTGTTTTT Tpet_0121 116460 - 115813 - | peroxiredoxin TERM 129 116348 - 116333 - G 76 -9 -3.66378 | CACACCGGAGTGAAA TCAGCC GGAT GGCTGA AGAGAACGAACCACT TERM 130 116617 - 116599 - R 100 -14.6 -5.62045 | opp_overlap 116599 ACAGAGAACAAAAAA CGGGGAGA ATC TCTCCCCG TCTCTACAAGCTTTC TERM 131 116599 - 116617 + r 89 -14.6 -2.89055 | opp_overlap 116599 ACAGAGAACAAAAAA CGGGGAGA ATC TCTCCCCG TCTCTACAAGCTTTC Tpet_0122 119818 - 116621 - | O-antigen polymerase TERM 132 118394 - 118381 - G 70 -5.3 -4.44046 | opp_overlap 118381 CCCATTTGAAATAAA CTTCA GAAA TGAAG TAGTTCCATTTCAAG Tpet_0123 120758 - 119835 - | glycosyl transferase family protein Tpet_0124 121464 - 120763 - | HisJ family histidinol phosphate phosphatase Tpet_0125 123035 - 121461 - | CTP synthetase TERM 133 121520 - 121502 - G 73 -2.2 -5.14985 | opp_overlap 121503 121506, overlap 121503 121504 TCAAATAGACAAAAA TCGGGTGC GGT GCTCCCAC TTTGCTCTTGTACTC TERM 134 122091 - 122106 + g 80 -6.8 -4.7219 | TTCGAGCATCTGACT GTCCAC CACG GTGGGC TTTTCTATTCCTGTC TERM 135 122844 - 122861 + g 73 -9.9 -3.3854 | overlap 122833 ATCCGCTTCGTAACC GTCTTCG GTGA CGAAGAC TTCTCCGTGCTGGTT TERM 136 123130 - 123104 - H 70 -9.4 -2.9155 | opp_overlap 123103 123102 123096, overlap 123107 TTCCTTAACATGAGA GCACATCGGGAT TGT AACCCGATGTGA GATTATGGTATAATC Tpet_0126 123177 - 124415 + | Beta-ketoacyl synthase-like protein Tpet_0127 124412 - 124825 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Tpet_0128 124822 - 125766 + | 2-nitropropane dioxygenase, NPD Tpet_0129 125763 - 126272 + | BioY protein Tpet_0130 126269 - 127150 + | malonyl CoA-acyl carrier protein transacylase Tpet_0131 127811 - 127128 - | 2-phosphosulfolactate phosphatase Tpet_0132 128821 - 127805 - | hypothetical protein TERM 137 129602 - 129578 - gR 91 -7.1 -5.26119 | opp_overlap 129581 129590 CGGTCAAAAAGAAAA TGTGACCCCCT TTG AGAGGATCTCA TTCCTCGAGTCGTTC Tpet_0134 131066 - 129600 - | hypothetical protein Tpet_0133 128871 - 129683 + | ribokinase-like domain-containing protein TERM 138 130602 - 130586 - Gf 88 -7.9 -4.93296 | overlap 130596 130598 CGAGGAGCAGAAAAA CGGTGTG AAA CACTCCG GTGACGAAGGGCATC Tpet_0135 131121 - 132350 + | transposase, putative TERM 139 132336 - 132384 + T 74 -11 -2.64472 | gap 1, opp_overlap 132361, overlap 132332 132380 132383 GTCAGCCGGCCTAAT GCT-CCCTCCTCGTGAGGTAGAG CAAG CCCTCCTTCAGGGGGAGGGCAGC TGACTTTCACAGCTC TERM 140 132381 - 132361 - T 74 -9.7 -3.2794 | opp_overlap 132336 132332 132380 CGTGAGGTAGAGCAA GCCCTCC TTCAGGG GGAGGGC AGCTGACTTTCACAG Tpet_0136 133143 - 132391 - | ABC transporter related Tpet_0137 133787 - 133149 - | hypothetical protein TERM 141 133302 - 133271 - G 76 -8.8 -3.66286 | gap 1, overlap 133274 AGATCATCTGAACAA GCACGTTCCCTGGAA TCG TTCCAGCGAACGC-C ACGGTGATGAAGGTG TERM 142 133300 - 133274 - G 85 -13.8 -2.94045 | overlap 133271 TCATCTGAACAAGCA CGTTCCCTGGAA TCG TTCCAGCGAACG CCACGGTGATGAAGG Tpet_0138 134184 - 133771 - | 7-cyano-7-deazaguanine reductase Tpet_0139 135385 - 134189 - | phosphomethylpyrimidine kinase type-1 Tpet_0140 136131 - 135385 - | xylose isomerase domain-containing protein TERM 143 135856 - 135885 + g 89 -6.4 -5.4505 | overlap 135882 135884 AATTATCATGTATTC TGCGCCGATCTT CCTGGC AAGCTCAGCGCA TTTTTTGTTCACAGA TERM 144 136035 - 136009 - G 100 -12.3 -5.00616 | opp_overlap 136017 TTTGTCGTGAAAAAA GCGGAGGACCT TCTCG AGGTCTTCCGC CTTGAAAAAACCCAG Tpet_0141 137402 - 136128 - | thiamine biosynthesis protein ThiC TERM 145 136248 - 136272 + g 71 -7.1 -4.15044 | opp_overlap 136253, overlap 136251 TCCCAGCGAAAGGCT GAACATCGTCT CCC AGTCGAAGTTC TTTCTTGCGAGGGCC Tpet_0142 138153 - 137407 - | ribulose-1,5-biphosphate synthetase TERM 146 138204 - 138176 - H 100 -14.7 -4.72272 | opp_overlap 138182, overlap 138182 CCTCCTTAGTAAAAA TAAAAACCTCCGC CGA GCGGAGGTTTTTT ATTTCCTCCTTCCCC TERM 147 138198 - 138182 - H 100 -13.7 -5.65496 | opp_overlap 138182, overlap 138176 TAGTAAAAATAAAAA CCTCCGC CGA GCGGAGG TTTTTTATTTCCTCC TERM 148 138182 - 138198 + H 100 -13.7 -5.68438 | opp_overlap 138176 138182 TAGTAAAAATAAAAA CCTCCGC CGA GCGGAGG TTTTTTATTTCCTCC Tpet_0143 138417 - 138761 + | hypothetical protein Tpet_0144 138776 - 139573 + | Linocin_M18 bacteriocin protein TERM 149 139577 - 139598 + T 100 -15.9 -3.64703 | opp_overlap 139567 CTAAAGTTCTGATCT GGTCCGCTC CTCG GAGCGGACC TTTCGATCAAAGAAC Tpet_0145 140120 - 139605 - | hypothetical protein TERM 150 140169 - 140146 - R 100 -17.4 -5.18371 | opp_overlap 140146 140143 140142 CCCTATAAAACAAAA GGGGCCGACC ATCC GGCCGGCCCC TCGATTTCAGTCTCA TERM 151 140146 - 140169 + r 93 -15.2 -2.67244 | opp_overlap 140146, overlap 140143 140142 CCCTATAAAACAAAA GGGGCCGACC ATCC GGCCGGCCCC TCGATTTCAGTCTCA TERM 152 140202 - 140223 + r 70 -5.7 -4.32034 | opp_overlap 140202, overlap 140203 GCTCACACGAAAACT CCCGGTCCT TCGA GGGGCCGGC TTTTGATCGTAGTGC TERM 153 140203 - 140222 + r 70 -9.2 -3.18738 | opp_overlap 140202, overlap 140202 CTCACACGAAAACTC CCGGTCCT TCGA GGGGCCGG CTTTTGATCGTAGTG Tpet_0146 141337 - 140333 - | glycosidase, PH1107-related TERM 154 141043 - 141055 + g 93 -6.3 -5.68023 | GCCAGAATACAACTT CCATT TCC AATGG TTTTTTTACTTCTCC TERM 155 141382 - 141359 - R 100 -16.8 -3.53012 | TTTCCCCCCTTGAAA CCTGAAGGGG AGGT CCCCTTCAGG CCAGCTGGTCCATCA Tpet_0147 141593 - 141378 - | hypothetical protein Tpet_0148 142109 - 141636 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tpet_0149 142173 - 142916 + | hypothetical protein TERM 156 143455 - 143500 + G 79 -10.6 -3.56569 | gap 2, opp_overlap 143465 143469, overlap 143457 143462 143466 GAGTGACAGAACCCC AACCAC-GCAAGCC-ATCCCCC TTCA GGGGGATAGGTTTGTTGTGGTG TTAATTATCTTATGA TERM 157 143457 - 143498 + G 86 -13.2 -3.34812 | gap 2, opp_overlap 143465 143469, overlap 143455 143462 143466 GTGACAGAACCCCAA CCAC-GCAAGCC-ATCCCCC TTCA GGGGGATAGGTTTGTTGTGG TGTTAATTATCTTAT TERM 158 143462 - 143492 + G 88 -12.7 -3.54602 | gap 1, opp_overlap 143465 143469, overlap 143457 143455 143466 AGAACCCCAACCACG CAAGCC-ATCCCCC TTCA GGGGGATAGGTTTG TTGTGGTGTTAATTA TERM 159 143466 - 143488 + G 90 -9.9 -4.39277 | gap 1, opp_overlap 143465 143469, overlap 143462 143457 143455 CCCCAACCACGCAAG CC-ATCCCCC TTCA GGGGGATAGG TTTGTTGTGGTGTTA TERM 160 143484 - 143469 - g 70 -10.4 -2.5602 | opp_overlap 143466 143462 143457 143455, overlap 143465 CAACCACGCAAGCCA TCCCCC TTCA GGGGGA TAGGTTTGTTGTGGT Tpet_0150 142922 - 143515 + | hypothetical protein Tpet_0151 143539 - 143928 + | transposase IS200-family protein TERM 161 144650 - 144634 - g 80 -6.5 -4.88918 | overlap 144637 TTAGTGCAAAGAAAA GAGCCCT GAG ACGGCTC AGAAACCAGATCAAC Tpet_0152 143913 - 145121 + | IS605 family transposase OrfB TERM 162 145160 - 145134 - T 74 -7.3 -4.29738 | gap 1, overlap 145135 TGAGAGCCACCAAAA GTCCCA-TCCCC TTCA GGGGATTGGGAG GAGGTCAAAACGTGA TERM 163 145159 - 145135 - T 78 -10.8 -3.17361 | gap 1, overlap 145134 GAGAGCCACCAAAAG TCCCA-TCCCC TTCA GGGGATTGGGA GGAGGTCAAAACGTG TERM 164 145196 - 145217 + T 100 -10.1 -5.31855 | opp_overlap 145197, overlap 145197 GAAACGATTGAATAA AGAAGGGGC TTTC GCCCCTTCA TTTTTGTTCTTGATC TERM 165 145216 - 145197 - T 100 -13.6 -4.23647 | opp_overlap 145196 145197 AAACGATTGAATAAA GAAGGGGC TTTC GCCCCTTC ATTTTTGTTCTTGAT TERM 166 145197 - 145216 + T 100 -13.6 -3.77486 | opp_overlap 145197, overlap 145196 AAACGATTGAATAAA GAAGGGGC TTTC GCCCCTTC ATTTTTGTTCTTGAT infB 147296 - 145215 - | translation initiation factor IF-2 Tpet_0154 147621 - 147307 - | ribosomal protein L7Ae/L30e/S12e/Gadd45 Tpet_0155 147847 - 147626 - | hypothetical protein Tpet_0156 148666 - 147851 - | PSP1 domain-containing protein Tpet_0157 149595 - 148657 - | DNA polymerase III gamma/tau subunits-like protein TERM 167 148965 - 148980 + g 72 -5.4 -4.4448 | overlap 148973 CGAGATAACCCTCGA GTCCTT CTGA AAGGGC TTTCTTTAAGAGTTT TERM 168 149477 - 149494 + g 73 -9.9 -3.31869 | opp_overlap 149491, overlap 149475 149488 AGTTCAAGGGATACT TCTCTCG GATA CGAGAGA TCTTCTCCGTTTATG TERM 169 150244 - 150218 - g 75 -6.7 -4.48483 | gap 1 GAGAAGAAAGAGAAA CGATC-TGGAAA GAAC TCTCCAAGATCG AAGGGGTTTACGTTC TERM 170 150313 - 150288 - g 89 -6.3 -5.42514 | gap 1, opp_overlap 150293, overlap 150293 GCAGAAAGGAAAAAA GATAGTTCCAGT TTC ACCGGAA-TATC CTCAGACCATAAAAA Tpet_0158 149656 - 151455 + | radical SAM domain-containing protein TERM 171 152473 - 152446 - g 87 -10.6 -4.15044 | gap 1 TCGGTTTCGAAGAAA GCTGTGGGTACCT TGC AGGAACCCAC-GC GAGGGACAAAGACGG Tpet_0159 151452 - 152867 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 172 152941 - 152965 + G 95 -14.9 -3.55444 | opp_overlap 152934 TGTGAACACGGTGGT GGAGGTCCGCG ACG CGCGGGCCCCC TTTGCCACATCGGCG TERM 173 153107 - 153093 - g 78 -6.4 -4.7329 | AAAAGCAGGGAAAAA GAGTGA TCA CCACTC ACAAAGATGAACCAA TERM 174 153255 - 153231 - g 74 -3.4 -4.99134 | overlap 153232 AGCTGAAAGGAAAAA GGGCGAGCTC TGTTG GAGCACAGCC TGGCGTTACAAAGGG TERM 175 153529 - 153501 - g 100 -12.5 -4.83169 | overlap 153518 ACTTTGCGAGAAAAA GAGGACTCCTC AAAAAAG GAGGAGTCCCC GATATAGAAAGAGCT TERM 176 153529 - 153518 - g 74 -3.6 -5.02074 | overlap 153501 GGACTCCTCAAAAAA GGAG GAGT CCCC GATATAGAAAGAGCT Tpet_0160 152864 - 153652 + | GTP-binding protein, HSR1-related Tpet_0161 155528 - 153615 - | alpha amylase, catalytic region Tpet_0162 155651 - 156016 + | regulatory protein GntR, HTH TERM 177 156225 - 156180 - g 72 -2.8 -4.93365 | gap 3, opp_overlap 156196 156197, overlap 156173 156196 TTTGAGAAGGAAAAA CTCCGGAGAGATCGAACTGAACG GCA CGTTCACTT--ATCTA-CCGGAG GAGAAGAAGCTCTAT TERM 178 156273 - 156259 - g 72 -8.6 -3.71378 | opp_overlap 156261, overlap 156266 TATCTCAGAGTGAAA GAGATC ATC GATCTC TTCGAGAAGATAGGG Tpet_0163 156016 - 156810 + | ABC transporter related Tpet_0164 156800 - 157546 + | hypothetical protein Tpet_0165 157561 - 157881 + | hypothetical protein TERM 179 157904 - 157877 - T 91 -8.4 -5.12707 | opp_overlap 157883, overlap 157878 157879 157883 TGAAACTGGAAAAAA TTTAAAGGGGCG GGGA CGCCCCTTTATC ACACTTCTTCTTCCT TERM 180 157903 - 157878 - T 89 -11.9 -3.6654 | opp_overlap 157883, overlap 157877 157879 157883 GAAACTGGAAAAAAT TTAAAGGGGCG GGGA CGCCCCTTTAT CACACTTCTTCTTCC TERM 181 157902 - 157879 - T 93 -15.4 -2.78839 | opp_overlap 157883, overlap 157878 157877 157883 AAACTGGAAAAAATT TAAAGGGGCG GGGA CGCCCCTTTA TCACACTTCTTCTTC TERM 182 157898 - 157883 - T 93 -11.8 -4.05875 | opp_overlap 157883, overlap 157879 157878 157877 TGGAAAAAATTTAAA GGGGCG GGGA CGCCCC TTTATCACACTTCTT TERM 183 157883 - 157898 + T 93 -11.8 -3.90729 | opp_overlap 157883 157879 157878 157877 TGGAAAAAATTTAAA GGGGCG GGGA CGCCCC TTTATCACACTTCTT rpsB 158685 - 157903 - | 30S ribosomal protein S2 Tpet_0167 160072 - 158825 - | major facilitator transporter Tpet_0168 161328 - 160132 - | glycosyl transferase, group 1 TERM 184 160243 - 160227 - G 82 -10.9 -3.55444 | opp_overlap 160227 160230, overlap 160229 160230 TGCCGAGTTCTGAAA GATCCTC GAG GAGGATC TTTCTCAATGCCTCC TERM 185 160227 - 160243 + g 87 -10.9 -3.92869 | opp_overlap 160227 160229 160230, overlap 160230 TGCCGAGTTCTGAAA GATCCTC GAG GAGGATC TTTCTCAATGCCTCC TERM 186 160264 - 160230 - G 76 -11.6 -2.61144 | gap 1, opp_overlap 160227 160230, overlap 160227 160229 CGAGTTCTGAAAGAT CCTCGAGGAGG-ATC TTTCTC AATGCCTCCTCGAGG TTATCCTTCCTGAAA TERM 187 160230 - 160264 + g 82 -10.9 -3.54029 | gap 1, opp_overlap 160227 160229 160230, overlap 160227 CGAGTTCTGAAAGAT CCTCGAGGAGG-AT CTTTCTCA ATGCCTCCTCGAGG TTATCCTTCCTGAAA Tpet_0169 162089 - 161325 - | hexapaptide repeat-containing transferase Tpet_0170 162249 - 163412 + | flagellin domain-containing protein TERM 188 163433 - 163448 + F 100 -11.8 -5.35224 | AACACCGTCAATTCC GGGGGC GCAA GCCCCC TTTTGTTTTTGTGCA TERM 189 164897 - 164886 - g 74 -3.6 -5.00616 | CCTTTGTGGAAAAAA CAGG TATC CCCG GACTTCTTTTCATTT TERM 190 165363 - 165346 - g 78 -6.3 -4.56978 | opp_overlap 165345 165346 TCTTGAAAGAATAAA GGAAGTC TCAA AACTTCC ATTCTACTACTACCG TERM 191 165547 - 165536 - g 74 -5.8 -4.67552 | TTCATGAAAAAAGAA GACG AAAT CGTC TGGGTAGGAAACATA Tpet_0171 163520 - 166102 + | glycosyl transferase family protein TERM 192 168886 - 168853 - g 89 -9.1 -4.56775 | opp_overlap 168862, overlap 168854 168855 ATCCCTCTTCAAAAA GCTTATGAAGAACTT GCCG AAGTTCTTCATAAAG TAGGAATAATAAAAA TERM 193 168885 - 168854 - g 85 -12.6 -3.33744 | opp_overlap 168862, overlap 168853 168855 TCCCTCTTCAAAAAG CTTATGAAGAACTT GCCG AAGTTCTTCATAAA GTAGGAATAATAAAA TERM 194 168884 - 168855 - g 83 -13.9 -2.60032 | opp_overlap 168862, overlap 168854 168853 CCCTCTTCAAAAAGC TTATGAAGAACTT GCCG AAGTTCTTCATAA AGTAGGAATAATAAA TERM 195 169039 - 169029 - g 76 -4 -5.05782 | ATCGAGCTCAAAAAA CTTT TGG AAAG GATCAAACAGATTCC Tpet_0172 166105 - 169080 + | glycosyl transferase family protein TERM 196 169108 - 169098 - g 86 -2.6 -5.69262 | TCACAAAAAGAAAAA TTAT TCG ATAA GGCAACTCTCAATCA Tpet_0173 169080 - 169238 + | hypothetical protein Tpet_0174 169350 - 170546 + | flavodoxin/nitric oxide synthase TERM 197 171583 - 171556 - g 73 -2.5 -5.25893 | opp_overlap 171539, overlap 171546 171557 ACAGAGACGAAAAAA TCGTCGGTGTG GTCGTT CTCTCCGACGT GAGAAAAGCCAGGGA Tpet_0175 170553 - 171629 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tpet_0176 171626 - 172288 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 198 172591 - 172577 - g 84 -8.6 -4.66953 | TGAAGATCGTAAAAA CATCCA GTC TGGATG AAGCCATAGATGGAG Tpet_0177 172378 - 173793 + | glycoside hydrolase family protein TERM 199 173803 - 173819 + F 100 -10.8 -5.10933 | opp_overlap 173803 CTCTGAAAGAACAAA GCCCCC TGACC GGGGGC TTTTCTTTTGGCTGG TERM 200 173819 - 173803 - f 93 -10.8 -4.56978 | opp_overlap 173803 CTCTGAAAGAACAAA GCCCCC TGACC GGGGGC TTTTCTTTTGGCTGG TERM 201 174979 - 174968 - g 76 -2.2 -5.4251 | TGGACAGAGAAAAAA CACC GCGT GATG AAAACGGAAACTACG TERM 202 175408 - 175386 - g 84 -8.4 -4.67607 | opp_overlap 175406, overlap 175388 175405 175407 GGGTGAAGAAAGAAA CATCTTCCCG TTC CAGGAAGAGG CCGATGTGATGTTCA TERM 203 175406 - 175388 - g 80 -9.6 -3.94772 | overlap 175386 175405 GTGAAGAAAGAAACA TCTTCCCG TTC CAGGAAGA GGCCGATGTGATGTT Tpet_0178 173962 - 175629 + | phosphoribulokinase/uridine kinase Tpet_0179 175626 - 176504 + | hypothetical protein TERM 204 176882 - 176870 - g 79 -7.7 -4.48902 | overlap 176873 ATAGATGGAAAGAAA CGAGA TGT TCTCG CGAAGCACGTGGACA Tpet_0180 176501 - 176947 + | hypothetical protein Tpet_0181 176932 - 177720 + | tRNA methyltransferase complex GCD14 subunit TERM 205 178687 - 178675 - g 73 -4.1 -4.82901 | opp_overlap 178675 TTGTTGGGAGAAAAA CCTTC GGT AAAGG TTCAGTCCAGACAGG Tpet_0182 177717 - 178925 + | carboxyl-terminal protease TERM 206 178946 - 178923 - g 87 -6.8 -5.18371 | opp_overlap 178923 178927 CTCGAGAAAATAAAA TGACGAGAAA CGGA TTTCTCTTCA TCCTGTTTGTGGTAA Tpet_0183 178922 - 179308 + | hypothetical protein TERM 207 179438 - 179456 + G 73 -2.5 -5.21459 | gap 1, opp_overlap 179425, overlap 179428 179425 ACTCGCTCAGGATTC TCCT-GAA GATT TTCGAGGA TTTCTTTTTGTTTTT Tpet_0184 179308 - 179733 + | hypothetical protein TERM 208 180723 - 180709 - g 72 -8.6 -3.7519 | GAAGAAAATGAAAGA CTCTTC GCC GAAGAG ATAAAACACATTCTG Tpet_0185 179740 - 180960 + | glycosyl transferase, group 1 Tpet_0186 180966 - 181610 + | hypothetical protein TERM 209 181773 - 181787 + G 83 -4.2 -5.40072 | opp_overlap 181775, overlap 181775 181785 TGATAGAACTTTCGA AACACC ACA GGTGTA TTTTTTTGAGAGGAA TERM 210 181775 - 181785 + G 74 -6.8 -4.34482 | opp_overlap 181775, overlap 181773 ATAGAACTTTCGAAA CACC ACA GGTG TATTTTTTTGAGAGG TERM 211 181914 - 181926 + G 74 -3.4 -5.00616 | opp_overlap 181914, overlap 181904 GAGTCGAAGAGATCA GGAA ATTTC TTCC TTTTTTCGAAAACAC Tpet_0187 181610 - 182239 + | metallophosphoesterase TERM 212 182502 - 182487 - g 70 -4.7 -4.43221 | AAACATGGTATAAAA GTCCT GGTGAG AGGAC TCAGGGCTGTGACCG Tpet_0188 182241 - 182726 + | pantetheine-phosphate adenylyltransferase Tpet_0189 182723 - 184645 + | threonyl-tRNA synthetase TERM 213 184709 - 184697 - g 70 -2 -5.01732 | AAGCTGTTGAAAAAA TAGA TCGAC TCTA CGAAAAGGTTGATTC TERM 214 185067 - 185050 - g 72 -6.3 -4.20368 | opp_overlap 185044, overlap 185051 TTATCGGAAGAGAAA CTCTCTC TGTT GAGAGAA TACGCCATGTTACAC Tpet_0190 184648 - 185487 + | metal dependent phosphohydrolase Tpet_0191 185952 - 185467 - | hypothetical protein TERM 215 185803 - 185817 + g 95 -11.4 -4.63089 | GTAAATGATCGCCCC GCCCTC TCT GAGGGC TTCTTTTTTGAAGTA Tpet_0192 187136 - 185964 - | hypothetical protein TERM 216 186649 - 186660 + g 73 -2.2 -5.1166 | overlap 186640 186643 186643 ATGTAGTCTCCAAGA GGTG GTAT TACC TTTTTGGTTTTCCTG Tpet_0193 187978 - 187142 - | mannose-6-phosphate isomerase, type I Tpet_0194 189342 - 187975 - | hypothetical protein Tpet_0195 190665 - 189358 - | tRNA (uracil-5-)-methyltransferase Gid Tpet_0196 191080 - 190670 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Tpet_0197 191829 - 191077 - | hypothetical protein Tpet_0198 192385 - 191816 - | hypothetical protein Tpet_0199 192845 - 192396 - | D-tyrosyl-tRNA deacylase TERM 217 192556 - 192579 + g 71 -7.5 -3.97088 | gap 1, overlap 192550 CCTTTATCTGGAGGT GCGG-CTTCT GTGAA AGAAGGCCGC TTTCCTCTTCTGCAA Tpet_0200 194986 - 192842 - | (p)ppGpp synthetase I, SpoT/RelA TERM 218 193525 - 193539 + g 80 -7.2 -4.72272 | GCGCGAGTTTTTCCT TCAGAA ACC TTCTGA TTTTTGCTCGCGCGC Tpet_0201 196200 - 195370 - | hypothetical protein TERM 219 196113 - 196100 - G 76 -4.5 -4.99043 | GTGTTATAAACAAAA GGAGA AACA CCTCC AAGAACGAGTTTCTG Tpet_0202 197491 - 196184 - | peptidase U62, modulator of DNA gyrase TERM 220 196702 - 196739 + g 72 -2.6 -5.00642 | gap 1 AAACAACAGGATTTC CCACCCGCT-CTCCAAG TTTTC CTTTGAGTGGCGAGAGG TTTTTCTGTACGTTC TERM 221 197275 - 197310 + g 73 -4.6 -4.77986 | opp_overlap 197271, overlap 197272 197277 CTTCGAAACACTTTT CTGGATCTTCCAGAAC CTGT GTTCTGAACGCTCCTG TTTTTCCATCTTTCA Tpet_0203 198876 - 197488 - | peptidase U62, modulator of DNA gyrase Tpet_0204 198986 - 199843 + | hypothetical protein Tpet_0205 200769 - 199840 - | CaCA family Na(+)/Ca(+) antiporter Tpet_0206 201196 - 200777 - | hypothetical protein Tpet_0207 203325 - 201193 - | ribonuclease R TERM 222 201783 - 201793 + g 71 -6.8 -4.10453 | opp_overlap 201782 TGCTTCTCAAAGGAT GGTC TTT GACC TTTTCCAGAAGTTTC Tpet_0208 203969 - 203340 - | uracil phosphoribosyltransferase TERM 223 203402 - 203430 + g 73 -11 -2.75845 | overlap 203400 TGATGTAACCGTGAT CGTTGAGGCGCT CGTCC AGTGCCGCAACG TAGATTTTAACATCT Tpet_0209 205249 - 203966 - | serine hydroxymethyltransferase Tpet_0210 206643 - 205261 - | cysteinyl-tRNA synthetase Tpet_0211 207113 - 206661 - | putative CheW protein Tpet_0212 207524 - 207126 - | biotin/lipoyl attachment domain-containing protein Tpet_0213 207805 - 207500 - | hypothetical protein Tpet_0214 209362 - 207815 - | carboxyl transferase TERM 224 208940 - 208921 - G 72 -9.2 -3.51934 | opp_overlap 208937, overlap 208919 208922 TGTTTCTTAGAAATA TCTCGCCG TAAC CGGCGAGT GCATCCACACCTTCC TERM 225 208939 - 208922 - G 78 -12.7 -2.70946 | opp_overlap 208937, overlap 208921 208919 GTTTCTTAGAAATAT CTCGCCG TAAC CGGCGAG TGCATCCACACCTTC TERM 226 209250 - 209278 + g 72 -2.6 -5.06735 | gap 2, overlap 209253 209257 AGTTCTAATCTTTCC CAGGCAGTGAGTTT TCC AGACTCA-TG-CTG TTTTTCTACTTTCTC Tpet_0215 211955 - 209364 - | CBS domain-containing protein TERM 227 209943 - 209964 + g 73 -2.2 -5.09762 | ATCGAATTGCGCCAT CCTCCTGA TTGACT TCAGAGGG TTTTTCTCTTCGAGT Tpet_0216 212573 - 211956 - | hypothetical protein Tpet_0217 213265 - 212570 - | hypothetical protein Tpet_0218 214068 - 213310 - | patatin Tpet_0219 215285 - 214071 - | S-layer domain-containing protein TERM 228 215024 - 215043 + g 70 -2.1 -4.97824 | gap 1, opp_overlap 215020 CTTTTACAATATCGA GCTCATCG AGCAG CGG-GAGC TTTTCTTTGAGTTTT Tpet_0220 215777 - 215346 - | MarR family transcriptional regulator Tpet_0221 216450 - 215782 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 229 216224 - 216251 + g 74 -3.5 -4.98461 | gap 1 CTGACAATGGCTACT TTCTTCC-CTTC CTTGA GAAGCGGCAGAA TTTCTTTTATTCTTT Tpet_0222 217162 - 216452 - | biotin/lipoate A/B protein ligase Tpet_0223 217845 - 217159 - | methyltransferase GidB TERM 230 217663 - 217685 + g 71 -7.8 -3.88985 | GAGTGTCCCTTTCAG TTCTTCTTTC AAA GGAAGGAGAA TTTCTACAACATTTT Tpet_0224 217893 - 220451 + | hypothetical protein Tpet_0225 220457 - 221134 + | ABC transporter related Tpet_0226 222051 - 221098 - | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 231 221280 - 221248 - G 74 -8.5 -3.91897 | overlap 221249 CCTGTCATCGAGAAA CTCTACCACGCCG TTTGGCC CAGCGTAGTAGAA CGTTCCATCAATCTC TERM 232 221279 - 221249 - G 70 -9.8 -2.94924 | overlap 221248 CTGTCATCGAGAAAC TCTACCACGCCG TTTGGCC CAGCGTAGTAGA ACGTTCCATCAATCT TERM 233 221441 - 221451 + g 71 -6.8 -4.13654 | opp_overlap 221440 CCTGCCGTTATGAAC CTGG TTT CCAG TTTGTAGTTTCCCAC TERM 234 222612 - 222622 + G 74 -6.8 -4.20148 | overlap 222605 GAGAACTCCAGATGC CCTG TAT CAGG TTGTTTTGAAATACT Tpet_0227 222094 - 223320 + | competence/damage-inducible protein CinA TERM 235 224013 - 223997 - g 72 -6.5 -4.26792 | opp_overlap 223997 223992, overlap 223989 AGAGAAATTCGAAAA CGAAGTG GAA CTCTTCG TCATCTCTCCTGTAG TERM 236 224809 - 224799 - g 72 -5.4 -4.37886 | GGATTCTCCACAAAA GAGA AAG TCTC AGAAGTGTCCGGAAG Tpet_0228 223317 - 225332 + | CheA signal transduction histidine kinase Tpet_0229 225338 - 225793 + | putative CheW protein Tpet_0230 225797 - 226159 + | response regulator receiver protein Tpet_0231 226166 - 226459 + | hypothetical protein fliP 226456 - 227205 + | flagellar biosynthesis protein FliP Tpet_0233 227212 - 227478 + | flagellar biosynthetic protein FliQ Tpet_0234 227491 - 228144 + | hypothetical protein TERM 237 228167 - 228139 - T 78 -10.4 -3.61591 | gap 1, opp_overlap 228137 228144, overlap 228142 228144 GAAAAATTGACAGAA GAATA-GGGCACC TTCC GGTGCCCTTACTC TCTTGTGCTGACGAC TERM 238 228163 - 228142 - T 82 -10.1 -3.91364 | opp_overlap 228137 228144, overlap 228139 228144 AAATTGACAGAAGAA TAGGGCACC TTCC GGTGCCCTT ACTCTCTTGTGCTGA TERM 239 228161 - 228144 - T 93 -12.7 -3.53276 | opp_overlap 228137 228144, overlap 228142 228139 ATTGACAGAAGAATA GGGCACC TTCC GGTGCCC TTACTCTCTTGTGCT TERM 240 228144 - 228161 + T 90 -12.7 -3.40593 | opp_overlap 228144 228142 228139, overlap 228137 ATTGACAGAAGAATA GGGCACC TTCC GGTGCCC TTACTCTCTTGTGCT Tpet_0235 228773 - 228162 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 241 228542 - 228552 + gT 71 -6.8 -4.04206 | opp_overlap 228542 228541 CCGCCGTCACAGAAC CTCC GGG GGAG TTTATGTAGAGGTAG Tpet_0236 230022 - 228745 - | trigger factor domain-containing protein TERM 242 229486 - 229500 + gr 91 -2.1 -5.88471 | overlap 229487 TATCACGTATTCGTA TTCAC GAGAG GTGAG TTTTTTTTCCTCCTC TERM 243 229550 - 229563 + gr 71 -9.5 -3.03085 | overlap 229552 ACTCTCACGAGATCT CCCGC TTCA GCGGG TCCTTCTTTGGGCTC Tpet_0237 230321 - 230049 - | hypothetical protein TERM 244 230160 - 230170 + g 79 -4 -5.1104 | TTTTCTCTTTTCGAT GATT TCC AATC TTTTTCTGTCTCTTT Tpet_0238 230836 - 230327 - | holo-acyl-carrier-protein synthase Tpet_0239 231483 - 230833 - | methyltransferase type 11 Tpet_0240 231929 - 231480 - | GatB/Yqey domain-containing protein TERM 245 231978 - 231952 - R 100 -12.2 -4.56775 | overlap 231953 231954 ACCTCCTCCCAAAAA TCGAGACCCCGC GGG GCGGGGCCTCAG GAAATCACACCTCTC TERM 246 231977 - 231953 - R 100 -15.7 -3.33744 | overlap 231952 231954 CCTCCTCCCAAAAAT CGAGACCCCGC GGG GCGGGGCCTCA GGAAATCACACCTCT TERM 247 231976 - 231954 - R 100 -17 -2.60032 | overlap 231953 231952 CTCCTCCCAAAAATC GAGACCCCGC GGG GCGGGGCCTC AGGAAATCACACCTC Tpet_0241 232706 - 231975 - | Triose-phosphate isomerase Tpet_0242 233938 - 232739 - | phosphoglycerate kinase TERM 248 233967 - 233986 + r 83 -10.6 -3.68302 | opp_overlap 233968, overlap 233968 CTTTTGAGTCTGAGA AGGGCGGG GAAA CCCGCCCG TTCTTCACATCTTGA TERM 249 233968 - 233985 + r 87 -14.1 -2.80499 | opp_overlap 233968, overlap 233967 TTTTGAGTCTGAGAA GGGCGGG GAAA CCCGCCC GTTCTTCACATCTTG TERM 250 233985 - 233968 - R 100 -14.1 -3.31144 | opp_overlap 233968 233967 TTTTGAGTCTGAGAA GGGCGGG GAAA CCCGCCC GTTCTTCACATCTTG Tpet_0243 234992 - 233991 - | glyceraldehyde-3-phosphate dehydrogenase, type I Tpet_0244 235365 - 235009 - | hypothetical protein Tpet_0245 236803 - 235367 - | DNA polymerase III, subunits gamma and tau TERM 251 236584 - 236606 + g 70 -4.8 -4.45168 | overlap 236585 CTCTGCAGGCTCTGC AGGAGTTGCA GGG TTCAACTCCC TTTCTGTTTTCACAG Tpet_0246 236868 - 237461 + | lytic transglycosylase, catalytic Tpet_0247 237931 - 237458 - | tartrate dehydratase subunit beta Tpet_0248 238545 - 237928 - | peptidase M50 Tpet_0249 239489 - 238539 - | polysaccharide pyruvyl transferase TERM 252 238580 - 238590 + g 75 -3.2 -5.15526 | GCATCTCCTTCATCT CGAT AGC GTCG TTTTTCATTTTCTCT TERM 253 238658 - 238688 + g 78 -6.3 -4.69028 | gap 1, opp_overlap 238648, overlap 238648 TCAAAGAGATTTCCA GAGGATC-TCTCTT TGAA AAGAAATGATCCTC TTTTGTGTATCTTGT Tpet_0250 239552 - 240292 + | beta-lactamase domain-containing protein Tpet_0251 241322 - 240282 - | CheC, inhibitor of MCP methylation TERM 254 240857 - 240839 - G 77 -11 -3.21063 | opp_overlap 240837 240835, overlap 240837 240832 CATCGAAATTCAATA TCTCCACC TTT GGCGGAGA GATATTGATGGTTAT Tpet_0252 242305 - 241319 - | flagellar motor switch protein FliM TERM 255 241997 - 241981 - G 74 -5.9 -4.56597 | CGCTTCCCTCAAAAA TATCTCC GGT GAAGATA ACTATGAACGATGGT Tpet_0253 242824 - 242315 - | flagellar basal body-associated protein FliL TERM 256 242588 - 242610 + g 73 -10.6 -3.09823 | TATCACGACTACGTC CCTTCCTCCT TTG AGAAGGAAGG TCTGGTTTTCCCCCC Tpet_0254 243700 - 242834 - | OmpA/MotB domain-containing protein TERM 257 243016 - 243026 + g 85 -5.4 -5.42975 | TGATCTGGTTTTCAA GATC CTG GATC TTTTTCTTTATCTCC Tpet_0255 244488 - 243700 - | MotA/TolQ/ExbB proton channel TERM 258 244045 - 244024 - G 86 -13.7 -3.16267 | overlap 244019 TCCAATCATACCGAA CGCAGGAGC GTAC GCCCCTGCG GATTCCAGAACCGCC Tpet_0256 244696 - 244493 - | flagellar FlbD family protein Tpet_0257 246574 - 244703 - | hypothetical protein Tpet_0258 247248 - 246574 - | flagellar hook capping protein Tpet_0259 249221 - 247245 - | flagellar hook-length control protein TERM 259 247294 - 247305 + g 70 -2.2 -5.08367 | AGACTGCCCGAAGTT TCAC GTTT GTGG TTTTTGCTTTCTCTT TERM 260 247362 - 247379 + g 78 -5.5 -4.87665 | opp_overlap 247364, overlap 247355 247352 CTGATTTTCCTGATA CAGGTAG TCTT CTTCCTG TTTTTCTACGTAGAC TERM 261 247616 - 247630 + g 79 -8.6 -4.27316 | CAAACCTTGGTAGAT GAACAG TCT CTGTTC TTTTCAGTTCGGGGA Tpet_0260 250162 - 249248 - | hypothetical protein TERM 262 250154 - 250131 - G 73 -2.4 -5.16237 | opp_overlap 250135, overlap 250135 AACGTTATTAAAAAA GCAACGAAGA AACC TCTTCGTTTT CCAGGCAAGGTCCAT TERM 263 250135 - 250150 + g 73 -7.6 -4.07687 | opp_overlap 250131 250135 TTATTAAAAAAGCAA CGAAGA AACC TCTTCG TTTTCCAGGCAAGGT TERM 264 250150 - 250135 - G 71 -7.6 -3.96447 | opp_overlap 250135, overlap 250131 TTATTAAAAAAGCAA CGAAGA AACC TCTTCG TTTTCCAGGCAAGGT Tpet_0261 250275 - 250619 + | hypothetical protein Tpet_0262 250644 - 251240 + | hypothetical protein Tpet_0263 252370 - 251237 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 265 251969 - 252004 + g 72 -2.6 -5.0133 | gap 1, opp_overlap 251974, overlap 251974 251975 GTCCACGGTTCTACC GAAGAGGTGAACGGGGA TGA TCACC-TTCACTTTCTC TTTTTTCAGAACGTG Tpet_0264 253137 - 252367 - | TatD family hydrolase TERM 266 252692 - 252680 - G 74 -3.3 -5.07486 | TAGTCCGAAGAAAAA GCGTG AAT CACCC CCCGCTTCTCCGGAA TERM 267 253206 - 253193 - H 77 -5.3 -5.00616 | opp_overlap 253193 GCCTTTGTGAAAAAA GTGAA GAGG TTCAC CTTTTTGTGATGAAA Tpet_0265 253302 - 253964 + | serine O-acetyltransferase TERM 268 254034 - 254024 - gf 85 -6.8 -5.03314 | TCGATGCGGAAAAAA GAGG ACT CCTC AAAAATGGAATCGTG TERM 269 254631 - 254620 - gf 72 -5.8 -4.42062 | opp_overlap 254627 TACCTCGCAAAGAAA GAGG GACT CCTC GTGGGGATCTCCTCC Tpet_0266 253879 - 254754 + | cysteine synthase A TERM 270 254861 - 254893 + GF 90 -9.9 -4.42386 | overlap 254864 254864 CTACGTGGGATCCGC TATGGGGGGATTCTT CAG GAGAATCCCCCGCTA TTTTCTCGGTCCCGG TERM 271 254864 - 254890 + GF 78 -11.6 -2.88788 | overlap 254864 254861 CGTGGGATCCGCTAT GGGGGGATTCTT CAG GAGAATCCCCCG CTATTTTCTCGGTCC TERM 272 254864 - 254891 + GF 91 -11.4 -3.82117 | gap 1, overlap 254861 254864 CGTGGGATCCGCTAT G-GGGGGATTCTT CAG GAGAATCCCCCGC TATTTTCTCGGTCCC Tpet_0267 254751 - 255182 + | hypothetical protein TERM 273 255876 - 255891 + GF 73 -2.6 -5.04385 | gap 1 GAGACTCGCGCTTTC TCTC-AG GAC CTCGAGA TTTTTTGAGAATCTG Tpet_0268 255121 - 256689 + | metallo-beta-lactamase superfamily hydrolase-like protein Tpet_0269 256723 - 256968 + | acyl carrier protein TERM 274 256986 - 256956 - T 82 -9.1 -4.24204 | gap 1, opp_overlap 256962, overlap 256960 256961 256962 CAGCTACATTGAAAA GAAATTGGGGTGAG CTCG CTCACCCCT-TTTC TATCTCCTCCGGTGT TERM 275 256983 - 256960 - T 79 -6.6 -4.70515 | opp_overlap 256962, overlap 256956 256961 256962 TACATTGAAAAGAAA TTGGGGTGAG CTCG CTCACCCCTT TTCTATCTCCTCCGG TERM 276 256982 - 256961 - T 76 -10.1 -3.41224 | opp_overlap 256962, overlap 256960 256956 256962 ACATTGAAAAGAAAT TGGGGTGAG CTCG CTCACCCCT TTTCTATCTCCTCCG TERM 277 256981 - 256962 - T 86 -13.6 -2.6365 | opp_overlap 256962, overlap 256961 256960 256956 CATTGAAAAGAAATT GGGGTGAG CTCG CTCACCCC TTTTCTATCTCCTCC TERM 278 256962 - 256981 + T 100 -13.6 -4.62984 | opp_overlap 256962 256961 256960 256956 CATTGAAAAGAAATT GGGGTGAG CTCG CTCACCCC TTTTCTATCTCCTCC Tpet_0270 257910 - 256975 - | hypothetical protein Tpet_0271 258692 - 257901 - | hypothetical protein TERM 279 258832 - 258802 - R 100 -19.9 -3.53012 | opp_overlap 258808, overlap 258808 CGGGTCGTGGGGAAA GAGAAAGGGGAGG GCCAG CCTCCCCTTTCTC TGACGGTAAGACTTC TERM 280 258826 - 258808 - R 95 -11.7 -4.32857 | opp_overlap 258808, overlap 258802 GTGGGGAAAGAGAAA GGGGAGG GCCAG CCTCCCC TTTCTCTGACGGTAA TERM 281 258808 - 258826 + r 93 -11.7 -4.04206 | opp_overlap 258808 258802 GTGGGGAAAGAGAAA GGGGAGG GCCAG CCTCCCC TTTCTCTGACGGTAA Tpet_0272 259013 - 258852 - | rubredoxin-type Fe(Cys)4 protein Tpet_0273 259419 - 259024 - | superoxide reductase Tpet_0274 259944 - 259432 - | rubrerythrin Tpet_0275 260190 - 260756 + | cupin 2 domain-containing protein Tpet_0276 260781 - 261173 + | adenosylmethionine decarboxylase TERM 282 261786 - 261769 - g 70 -9.1 -3.34013 | GATGCCCTCAAGGAA GACGGAG TCTT CTCCGCC GAGACGGAAGACCCG TERM 283 261993 - 261975 - g 76 -5.3 -4.7416 | CGAAAAGGTGAAAAA CTTCAAC AAAGA GCTGAAG TACTACAACGAAGAA Tpet_0277 261178 - 262068 + | spermidine synthase TERM 284 262089 - 262074 - f 79 -11.8 -2.53995 | opp_overlap 262074 ACTGATGTGAATCGA CCCCGC TCCG GCGGGG TTTTTCCTTTCTGGT TERM 285 262074 - 262089 + F 100 -11.8 -5.05505 | opp_overlap 262074 ACTGATGTGAATCGA CCCCGC TCCG GCGGGG TTTTTCCTTTCTGGT Tpet_0278 262142 - 263473 + | RNA modification protein Tpet_0279 263436 - 264296 + | phospholipase D/transphosphatidylase Tpet_0280 264283 - 265077 + | Cof-like hydrolase Tpet_0281 265004 - 265774 + | hypothetical protein Tpet_0282 266135 - 265776 - | DNA polymerase beta subunit Tpet_0283 266599 - 266117 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 286 266506 - 266524 + g 74 -11 -2.87564 | overlap 266508 CATCCGAGTGCCCGA GACTTCCC ACG GGGGAGTC TATCTCCACACCTGC Tpet_0284 266666 - 267511 + | NAD+ synthetase Tpet_0285 267538 - 269469 + | lipopolysaccharide biosynthesis protein TERM 287 269490 - 269467 - T 87 -6.6 -5.20333 | opp_overlap 269467 269470, overlap 269468 269470 TACGTAGAAGAAAAA TGAGGAGGGG AAAT CCCCTCCTTT CATTTTTTTCACGGT TERM 288 269467 - 269492 + T 87 -4.8 -5.43866 | gap 2, opp_overlap 269467 269468 269470, overlap 269470 TACGTAGAAGAAAAA TG-A-GGAGGGG AAAT CCCCTCCTTTCA TTTTTTTCACGGTTG TERM 289 269489 - 269468 - T 78 -10.1 -3.71115 | opp_overlap 269467 269470, overlap 269467 269470 ACGTAGAAGAAAAAT GAGGAGGGG AAAT CCCCTCCTT TCATTTTTTTCACGG TERM 290 269470 - 269487 + T 100 -12.7 -4.5187 | opp_overlap 269468 269467 269470, overlap 269467 GTAGAAGAAAAATGA GGAGGGG AAAT CCCCTCC TTTCATTTTTTTCAC TERM 291 269487 - 269470 - T 93 -12.7 -3.42342 | opp_overlap 269470 269467, overlap 269468 269467 GTAGAAGAAAAATGA GGAGGGG AAAT CCCCTCC TTTCATTTTTTTCAC Tpet_0286 270965 - 269499 - | peptidase C11, clostripain TERM 292 269630 - 269646 + g 79 -2.9 -5.42259 | AGATACTGACAGGAG CGGAAAG AGT TTGTCCG TTTTTTTCACCATAG Tpet_0287 272406 - 270979 - | hypothetical protein TERM 293 271621 - 271599 - G 72 -6.2 -4.3739 | opp_overlap 271599 271598 271601 GACTCGCGGAGAAAA GATCGGGGTA CTT TCCACCGATC ATTGTGAGCTCTCCC Tpet_0288 273022 - 272411 - | HAD family hydrolase TERM 294 272708 - 272720 + g 82 -7.7 -4.58395 | GTTGGAAAGAGCGTA GAGCT TGA AGCTC TTTTTCAGGGCTGGA Tpet_0289 274214 - 273012 - | hypothetical protein Tpet_0290 277194 - 274216 - | polysaccharide export protein TERM 295 276972 - 276962 - G 80 -5.4 -4.93296 | opp_overlap 276968 TCAGGATCAGAAAAA CTCT TGG AGAG CCTCTCTTTGAGAAA Tpet_0291 277348 - 277614 + | hypothetical protein Tpet_0292 277629 - 277838 + | hypothetical protein Tpet_0293 277857 - 278090 + | hypothetical protein Tpet_0294 278083 - 278463 + | hypothetical protein TERM 296 278487 - 278460 - f 86 -9.8 -4.35581 | opp_overlap 278462 278466, overlap 278461 278462 278466 CGAAAAGATCGAAAA CTGAAAGCGGGG CCAT CCCCGCTTTCTT TCTTCCGGAGGTGAT TERM 297 278486 - 278461 - f 91 -13.3 -3.20264 | opp_overlap 278462 278466, overlap 278460 278462 278466 GAAAAGATCGAAAAC TGAAAGCGGGG CCAT CCCCGCTTTCT TTCTTCCGGAGGTGA TERM 298 278485 - 278462 - f 100 -16.8 -2.51074 | opp_overlap 278462 278466, overlap 278461 278460 278466 AAAAGATCGAAAACT GAAAGCGGGG CCAT CCCCGCTTTC TTTCTTCCGGAGGTG TERM 299 278462 - 278485 + F 100 -16.8 -4.1552 | opp_overlap 278462 278461 278460 278466, overlap 278466 AAAAGATCGAAAACT GAAAGCGGGG CCAT CCCCGCTTTC TTTCTTCCGGAGGTG TERM 300 278466 - 278481 + F 100 -11.8 -4.67607 | opp_overlap 278462 278461 278460 278466, overlap 278462 GATCGAAAACTGAAA GCGGGG CCAT CCCCGC TTTCTTTCTTCCGGA TERM 301 278481 - 278466 - f 93 -11.8 -3.9373 | opp_overlap 278466 278462, overlap 278462 278461 278460 GATCGAAAACTGAAA GCGGGG CCAT CCCCGC TTTCTTTCTTCCGGA Tpet_0295 278506 - 278913 + | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase TERM 302 279125 - 279108 - g 71 -7.7 -3.86481 | opp_overlap 279120 AACAATTGATAAGAA CCATCGC TGGA ACGATGG CGGGTTTCATCATCG TERM 303 279193 - 279227 + G 79 -9.4 -4.1585 | gap 1, opp_overlap 279169, overlap 279226 CAGACACCATTTATT CGGGAACTTCCTGTT CTCCGT GACAGGG-GTTCCCG TTTTAAACGTTCTGG TERM 304 280105 - 280090 - g 78 -6.2 -4.62069 | CTGGTACGTGAAAAA CAGAAA CATC TTTCTG GATCTGAGAATAATT Tpet_0296 278939 - 280165 + | sugar transferase Tpet_0297 280144 - 281259 + | glycosyl transferase, group 1 TERM 305 281952 - 281964 + G 100 -7.7 -5.68438 | TGTCCTCCTTCCTCT GCCAA ATG TTGGC TTTTTTCTTTCATAA Tpet_0298 281441 - 282508 + | hypothetical protein Tpet_0299 282718 - 283881 + | glycosyl transferase, group 1 TERM 306 284298 - 284312 + G 70 -5 -4.52589 | GGATCGTCACAGATC GAGTCT CTC AGATTC TTTTCTGTCCAAGCA Tpet_0300 283886 - 284965 + | UDP-N-acetylglucosamine 2-epimerase Tpet_0301 285001 - 285171 + | hypothetical protein Tpet_0302 285233 - 285352 + | WD-40 repeat-containing protein Tpet_0303 285371 - 285781 + | HEPN domain-containing protein TERM 307 286049 - 286031 - gT 79 -8.2 -4.29981 | overlap 286022 286020 CAAACAGATGGAAAA GACCATCT CGA AGATGATC GAGGGTGGAGTGGTT Tpet_0304 285732 - 286082 + | DNA polymerase beta subunit Tpet_0305 287294 - 286137 - | ATPase TERM 308 287441 - 287482 + r 72 -8.2 -3.9226 | opp_overlap 287465 287473 287474, overlap 287455 287464 287474 287475 ACGGACTGGTTTCAA CTTGTAGGTATTTATCGA ATGTAA TCGATAAATTCGTACGAG TTTATCGAATGTGTT TERM 309 287455 - 287500 + r 74 -10.7 -2.52795 | opp_overlap 287465 287473 287474, overlap 287441 287464 287474 287475 ACTTGTAGGTATTTA TCGAATGTAATCGATAAATTC GTAC GAGTTTATCGAATGTGTTCGA TAAATTCGAACGGTT TERM 310 287513 - 287474 - R 70 -9.4 -2.98368 | opp_overlap 287441 287464 287455 287474 287475, overlap 287465 287473 ATGTAATCGATAAAT TCGTACGAGTTTATCGAA TGTG TTCGATAAATTCGAACGG TTTGGTATAGTTGAA TERM 311 287474 - 287513 + r 100 -13.8 -3.889 | opp_overlap 287465 287474 287473, overlap 287441 287464 287455 287475 ATGTAATCGATAAAT TCGTACGAGTTTATCGAA TGTG TTCGATAAATTCGAACGG TTTGGTATAGTTGAA TERM 312 287475 - 287512 + r 89 -15.1 -2.92858 | opp_overlap 287465 287474 287473, overlap 287441 287464 287455 287474 TGTAATCGATAAATT CGTACGAGTTTATCGAA TGTG TTCGATAAATTCGAACG GTTTGGTATAGTTGA Tpet_0306 289032 - 287629 - | polysaccharide biosynthesis protein TERM 313 288403 - 288416 + g 86 -5.3 -5.49809 | CGGCAAACCGTACTT TAGGA ACTC TCCTA TTTTTTTGAAATTTA TERM 314 288978 - 288967 - G 89 -4.4 -5.67063 | GGGAGTAGAAAAAAA GCTA ACAA TAGC ACGGATCCATGTGCC Tpet_0307 290224 - 289034 - | glycosyl transferase, group 1 TERM 315 289487 - 289503 + g 71 -3.6 -4.89852 | overlap 289488 TTTTCTAAATATCTC AGGCAG TTTAT CTGCCC TTTTTATGGGTATCA Tpet_0308 291303 - 290245 - | UDP-N-acetylglucosamine 2-epimerase TERM 316 290891 - 290877 - G 70 -5 -4.53303 | CACTGGGACAGAAAA GAATCT GAG AGACTC GATCTGTGACGATCC Tpet_0309 292394 - 291300 - | hypothetical protein TERM 317 291948 - 291959 + g 82 -5.8 -5.13473 | GATACACAGGTCAGA CAGC TGAA GCTG TTTTTTGAATATCCT Tpet_0310 293110 - 292400 - | hypothetical protein TERM 318 292952 - 292927 - G 83 -8.9 -4.25848 | overlap 292915 292916 292928 AAGGTCCGAGGAAAA CCCCGGCGTAC AGCT GAACACCGGGA AGCAGTTCGTACGCC TERM 319 292951 - 292928 - G 74 -10.2 -3.15027 | overlap 292915 292916 292927 AGGTCCGAGGAAAAC CCCGGCGTAC AGCT GAACACCGGG AAGCAGTTCGTACGC Tpet_0311 293985 - 293110 - | beta-lactamase domain-containing protein Tpet_0312 294103 - 294450 + | hypothetical protein TERM 320 294473 - 294452 - T 100 -15.9 -3.46212 | opp_overlap 294452 294455, overlap 294455 AGGACGGAGAATGAA GAAGGGCGC TTCA GCGCCCTTC TTTCATATCTTCAGG TERM 321 294452 - 294473 + T 100 -15.9 -3.93262 | opp_overlap 294452 294455, overlap 294455 AGGACGGAGAATGAA GAAGGGCGC TTCA GCGCCCTTC TTTCATATCTTCAGG TERM 322 294455 - 294470 + T 93 -11.8 -4.086 | opp_overlap 294452 294455, overlap 294452 ACGGAGAATGAAGAA GGGCGC TTCA GCGCCC TTCTTTCATATCTTC TERM 323 294470 - 294455 - T 93 -11.8 -3.86312 | opp_overlap 294455 294452, overlap 294452 ACGGAGAATGAAGAA GGGCGC TTCA GCGCCC TTCTTTCATATCTTC Tpet_0313 294703 - 294476 - | ribosomal protein S18 Tpet_0314 295143 - 294718 - | single-strand binding protein Tpet_0315 295529 - 295143 - | ribosomal protein S6 Tpet_0316 296061 - 295606 - | iron dependent repressor Tpet_0317 296444 - 296082 - | hypothetical protein TERM 324 296371 - 296383 + g 71 -7.7 -3.95567 | ACGTGCACAGGTTCA CCTTC TGG GAAGG TTTCGTCGTTTTCTT Tpet_0318 297784 - 296441 - | hypothetical protein Tpet_0319 299428 - 297788 - | phosphotransferase domain-containing protein TERM 325 298103 - 298136 + g 88 -8.4 -4.86731 | overlap 298103 298104 CAGATGATCGTTCTC G-TGAAGGGTGTCGAT CATG ATC-ACACCCTTCAGC TTTTCTTTCACGAAG TERM 326 298104 - 298134 + g 76 -12.1 -2.70452 | gap 1, overlap 298103 298103 AGATGATCGTTCTCG TGAAGGGTGTCGAT CATG ATC-ACACCCTTCA GCTTTTCTTTCACGA TERM 327 298847 - 298866 + g 70 -10 -3.08812 | overlap 298847 298849 298863 GTTGTCCTGTCCCAC GGTGGCAC CGAG GTGCCATC CTTTGTTCAACGCGA TERM 328 298847 - 298867 + g 73 -7.6 -4.15044 | gap 1, overlap 298847 298849 298863 GTTGTCCTGTCCCAC GG-TGGCAC CGAG GTGCCATCC TTTGTTCAACGCGAG Tpet_0320 301547 - 299442 - | monosaccharide-transporting ATPase TERM 329 300194 - 300176 - G 72 -6.6 -4.28994 | overlap 300177 CATCACTCAGGAAAA CGGAAGGG ACA CCCTCCAG AAGAACTTCTATCAC TERM 330 300665 - 300651 - G 74 -5.7 -4.57073 | opp_overlap 300638 300636 300650 300651 GATCTTTTTCAAAAA GAGAG CTTTT CTCTC ATCTTTTTTCATCGA TERM 331 301279 - 301302 + g 83 -4.6 -5.41746 | gap 1 CTTTGGAACGGGTCG TC-GTTCACCG TGA TGGTGAGCAGA TTTTTTTCGGCCGTT Tpet_0321 302819 - 301557 - | binding-protein-dependent transport systems inner membrane component Tpet_0322 302914 - 304173 + | extracellular solute-binding protein TERM 332 304174 - 304194 + F 100 -14 -4.72863 | GAGTACGGCGAGTGA GCGGGAGG TTGTT CCTCCCGC TTTTCCTTTGTTTAA Tpet_0323 304298 - 305614 + | xanthine/uracil/vitamin C permease TERM 333 306059 - 306041 - g 70 -9.6 -3.08798 | overlap 306039 ACTTCCGACCGAAGA CCTACGAA GAT CTCGTAGG GAAAACCGTGGCTGT Tpet_0324 305653 - 306393 + | extracellular solute-binding protein TERM 334 306452 - 306480 + G 90 -13.2 -3.49618 | overlap 306453 TAATCTACCGCTCCT TCTGAAGGGTGC CCTGC GCACCCTTCAGC TTACTTCTCTGGCCG TERM 335 306453 - 306479 + G 95 -16.7 -2.69449 | overlap 306452 AATCTACCGCTCCTT CTGAAGGGTGC CCTGC GCACCCTTCAG CTTACTTCTCTGGCC Tpet_0325 306408 - 307058 + | polar amino acid ABC transporter, inner membrane subunit Tpet_0327 309401 - 307728 - | peptidoglycan glycosyltransferase Tpet_0326 307055 - 307783 + | ABC transporter related TERM 336 309014 - 309030 + gT 78 -8.7 -4.03078 | opp_overlap 309005 AACCAACCACATGCG GTGCGAG CGG CTCGTAC TTTCTCCTGTAATCC Tpet_0328 309742 - 309398 - | hypothetical protein TERM 337 309701 - 309688 - G 75 -6.7 -4.45261 | GAAAGAAACTCAAAA CGTCT TGGA AGACG TAGTCCCAGAAGATG Tpet_0329 310362 - 309739 - | hypothetical protein Tpet_0330 311372 - 310362 - | cell shape determining protein MreB TERM 338 310957 - 310982 + g 75 -9.7 -3.48276 | overlap 310977 TCGACGTTGAGATTT GAGCCTATAGC AGCC GCCATGGGCTC TTCTATGAGAAAGAC TERM 339 311408 - 311429 + H 73 -4.5 -4.77036 | opp_overlap 311408 CACGTTCTCGATAAG GATTATATC ATCT GATAGAATC TTTTTAGTAGTGGAG TERM 340 312383 - 312366 - g 100 -9.9 -5.15634 | overlap 312370 GATGTGAGGAAAAAA GTGATCC TCGT GGATCAC AACGAGATCACCCAG Tpet_0331 311454 - 313091 + | putative manganese-dependent inorganic pyrophosphatase Tpet_0332 313088 - 313993 + | hypothetical protein TERM 341 314362 - 314352 - gf 74 -2.4 -5.18357 | GAAGTGAGGAAAAAA CTCG ATT CGGG GGCGTTTGGAAAGAT Tpet_0333 313923 - 315005 + | oxidoreductase domain-containing protein TERM 342 315611 - 315588 - g 89 -11 -4.07568 | opp_overlap 315610, overlap 315572 315589 315591 CCTTCTCGTGGAAAA GGAGGACCCT CTGG AGGGTCCTCG CGATAGTCGTCGTTT TERM 343 315610 - 315589 - g 88 -14.5 -3.04398 | overlap 315572 315588 315591 CTTCTCGTGGAAAAG GAGGACCCT CTGG AGGGTCCTC GCGATAGTCGTCGTT TERM 344 315608 - 315591 - g 75 -11.3 -3.08032 | overlap 315589 315588 TCTCGTGGAAAAGGA GGACCCT CTGG AGGGTCC TCGCGATAGTCGTCG Tpet_0334 315002 - 315709 + | rhomboid family protein Tpet_0335 317000 - 315696 - | UDP-glucose 6-dehydrogenase Tpet_0336 318454 - 316994 - | radical SAM domain-containing protein TERM 345 317827 - 317800 - GR 80 -10.6 -3.34398 | gap 1, overlap 317798 317803 GTTTTCCGGGAAAGA CAC-CCAGCGATG GAA CAACGCTGGAGTG AGGCAAAAAATCGTT TERM 346 317823 - 317803 - GR 74 -11.1 -2.54325 | overlap 317800 317798 TTCCGGGAAAGACAC CCAGCGATG GAA CAACGCTGG AGTGAGGCAAAAAAT TERM 347 318359 - 318340 - GR 87 -10.7 -4.0342 | opp_overlap 318340 CGGAAGGAACAACAA GGGCGAC TCGAAC GTCGCCC TTTGTCTCCGTTTCT TERM 348 318340 - 318359 + gr 87 -10.7 -4.11897 | opp_overlap 318340 CGGAAGGAACAACAA GGGCGAC TCGAAC GTCGCCC TTTGTCTCCGTTTCT Tpet_0337 318839 - 318414 - | thioesterase-like protein Tpet_0338 320668 - 318836 - | ATP-dependent metalloprotease FtsH TERM 349 319540 - 319553 + g 76 -8.1 -4.11216 | CCGCAAGAAGCGCCG CCTCG TTGA CGAGG TTTTCCAGGTCCGCC TERM 350 320197 - 320215 + g 77 -8.8 -3.95153 | overlap 320189 CGTCCTTGAAGGTGA CCCTCTTG TTC CCAGAGGG TTTGTACATCGTTGC TERM 351 320610 - 320597 - G 91 -6.7 -5.47218 | TTCGACGTAAAAAAA TCTGG CGAG CCAGA AAAGTGTAACTATTA Tpet_0339 321914 - 320655 - | tRNA(Ile)-lysidine synthetase Tpet_0340 322143 - 322910 + | pyrroline-5-carboxylate reductase Tpet_0341 322911 - 323450 + | GCN5-related N-acetyltransferase Tpet_0342 327550 - 323447 - | DNA polymerase III PolC TERM 352 326283 - 326256 - G 77 -7 -4.386 | opp_overlap 326256, overlap 326257 GAATTCTCCAGAAAA CCGAGGAATTCC GGTA GAACTTCCTCGA TGCTTCTCTTGTTTT TERM 353 326766 - 326782 + g 72 -5.1 -4.56093 | GGAGAGTTGTCCATC CTTTTCG CTT CGGGAAG TTTTGTGATTCCCTT Tpet_0343 328034 - 327537 - | crossover junction endodeoxyribonuclease RuvC Tpet_0344 329124 - 328117 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Tpet_0345 330562 - 329099 - | apolipoprotein N-acyltransferase TERM 354 330081 - 330064 - G 86 -4.7 -5.5943 | AAACTATCAAAAAAA CGAGGCC CAGA GTCCCCG TGATGGAAACGATCT Tpet_0346 331706 - 330555 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 355 330906 - 330920 + g 71 -3.5 -4.8667 | gap 1, overlap 330906 CTTTGAATATCTCTC CGCCGC TCCT GCG-CG TTTTTCTACGATCTC TERM 356 331759 - 331739 - R 100 -16.9 -5.2422 | AATGATATCAAAAAA TCCCCCTCC ACC GGAGGGGGA AAGATCACCAAAGGG Tpet_0347 333182 - 331803 - | protease Do Tpet_0348 333296 - 334180 + | signal recognition particle-docking protein FtsY TERM 357 334474 - 334461 - g 88 -8.1 -4.74103 | GGTCGAATTGAAAAA CGTGG AGAA CCACG TGGAAGCGATCAAGC Tpet_0349 334177 - 334833 + | hypothetical protein TERM 358 336131 - 336144 + G 70 -2.3 -5.09259 | opp_overlap 336131 GGAAGGAGAACCTAA GGACC CCAT GCTCC TTTTCTTTTCCAATA Tpet_0350 334833 - 336473 + | peptidase M23B Tpet_0351 336475 - 336888 + | BadM/Rrf2 family transcriptional regulator TERM 359 336887 - 336909 + T 80 -7.6 -4.55128 | opp_overlap 336890, overlap 336888 336890 AGAAACTGAAACAGT AAAGCCCGCT TCC AGCGGGCTCA TTTTACTTTCAGGCT TERM 360 336888 - 336908 + T 80 -11.1 -3.32354 | opp_overlap 336890, overlap 336887 336890 GAAACTGAAACAGTA AAGCCCGCT TCC AGCGGGCTC ATTTTACTTTCAGGC TERM 361 336890 - 336906 + T 93 -13.7 -3.22314 | opp_overlap 336890, overlap 336888 336887 AACTGAAACAGTAAA GCCCGCT TCC AGCGGGC TCATTTTACTTTCAG TERM 362 336906 - 336890 - T 100 -13.7 -4.02206 | opp_overlap 336888 336887 336890 AACTGAAACAGTAAA GCCCGCT TCC AGCGGGC TCATTTTACTTTCAG Tpet_0352 337101 - 336907 - | hypothetical protein Tpet_0353 337773 - 337105 - | sugar fermentation stimulation protein TERM 363 337620 - 337635 + g 76 -4 -5.00616 | ATTCTGCACGCTTCA GGAGAA CTCT TTTTCC TTTTTTCAAAAGCGG Tpet_0354 338249 - 337770 - | hypothetical protein Tpet_0355 339549 - 338170 - | major facilitator transporter TERM 364 339379 - 339344 - GR 93 -10.6 -4.4648 | opp_overlap 339337, overlap 339345 ACGTTGACCAGAAAA CGCCTCTTTCTGTATT TCTG AACAAAGAAAGAGGCA AACAGCTGAAAAAAC TERM 365 339378 - 339345 - GR 83 -11.9 -3.27406 | opp_overlap 339337, overlap 339344 CGTTGACCAGAAAAC GCCTCTTTCTGTATT TCTG AACAAAGAAAGAGGC AAACAGCTGAAAAAA Tpet_0356 340133 - 339546 - | hypothetical protein TERM 366 340073 - 340061 - G 74 -5.5 -4.67173 | TAATGGAAAAAACAA CTGGA ATT CCCAG GAGAGCCACTAAAAC Tpet_0357 340184 - 340723 + | hypothetical protein Tpet_0358 342638 - 340725 - | methyltransferase type 11 TERM 367 341239 - 341251 + g 85 -3.4 -5.55695 | overlap 341244 ATGAGTTCTTCAGGT GTGT ACACA ACAC TTTTTTGTGTTATTC TERM 368 341717 - 341753 + g 79 -2.3 -5.60993 | gap 1, overlap 341720 341729 GTTTTCTGGGATCTC CCAGAAC-GACCACCA CGTTCT TTGTGGTTTGTTCAGG TTTTTTTCTGACAGG TERM 369 342618 - 342637 + g 75 -2.8 -5.15969 | overlap 342611 CTGAATGTTCTTCCT TGGAGATC CGTT GTTCTTCA TTTTTTAAATTCCCC Tpet_0359 343823 - 342768 - | magnesium and cobalt transport protein CorA TERM 370 343885 - 343866 - R 100 -15 -5.09259 | opp_overlap 343862 343860 TATTTTAAAACAAAA GGCGCACC CAAA GGTGCGCC TGCCTGAATTGTTGA Tpet_0360 344453 - 343905 - | DNA protection protein DPS TERM 371 344635 - 344647 + H 71 -4.1 -4.8543 | TCTGATTGCTTCCTT TATCG CCT CGATG TTTTTCTCCGACTTC TERM 372 344828 - 344848 + H 83 -4 -5.36441 | opp_overlap 344832 GCCCAGAGATACCAC GAAAGATG TTCTT CATCTTGC TTTTTTCTATCCGGA TERM 373 346550 - 346569 + G 82 -7.8 -4.69326 | opp_overlap 346550 CGATGGAAGGAATGA GGCTGGTT GATT ATCCAGCC TTTTCTGTTCAATAT Tpet_0362 345487 - 346665 + | carbamoyl phosphate synthase small subunit TERM 374 349573 - 349545 - g 71 -6.8 -4.03413 | gap 1, opp_overlap 349550 349553, overlap 349547 ACCGTCGCAGACAAA GACAAGAG-GGAA GCCG TTCCTCTCTTGGC TCACCTCGCGGACAT Tpet_0363 346665 - 349964 + | carbamoyl-phosphate synthase, large subunit TERM 375 349949 - 350000 + T 84 -6.7 -5.1287 | gap 2, opp_overlap 349960 349961, overlap 349958 349960 349960 GAGAAGACTCACCGA CAC-ATGGAAAATG-TGAAGGGCCC TGAA GGGCCCTTCACCATATTTCTTCGAG TTTTTTACATATGAG TERM 376 349958 - 349990 + T 93 -11.4 -4.25615 | gap 1, opp_overlap 349960 349961, overlap 349949 349960 349960 CACCGACACATGGAA AATG-TGAAGGGCCC TGAA GGGCCCTTCACCATA TTTCTTCGAGTTTTT TERM 377 349960 - 349987 + T 93 -15.6 -2.8136 | opp_overlap 349960 349961, overlap 349960 349958 349949 CCGACACATGGAAAA TGTGAAGGGCCC TGAA GGGCCCTTCACC ATATTTCTTCGAGTT TERM 378 349960 - 349988 + T 100 -14 -3.70741 | gap 1, opp_overlap 349960 349961, overlap 349958 349949 349960 CCGACACATGGAAAA TG-TGAAGGGCCC TGAA GGGCCCTTCACCA TATTTCTTCGAGTTT TERM 379 349987 - 349960 - T 100 -15.6 -4.26188 | opp_overlap 349960 349958 349949 349960, overlap 349961 CCGACACATGGAAAA TGTGAAGGGCCC TGAA GGGCCCTTCACC ATATTTCTTCGAGTT TERM 380 349986 - 349961 - T 100 -19.1 -3.15231 | opp_overlap 349960 349960 349958 349949, overlap 349960 CGACACATGGAAAAT GTGAAGGGCCC TGAA GGGCCCTTCAC CATATTTCTTCGAGT Tpet_0364 351047 - 349983 - | 3-isopropylmalate dehydrogenase TERM 381 350355 - 350331 - G 73 -11.5 -2.60992 | opp_overlap 350347 350348, overlap 350328 AATGTCTCCAAACAT GTTCGTTGTGA GGA TCACATCGAAC TGCGATGGTTTCAGG TERM 382 350550 - 350560 + g 85 -6.8 -5.00895 | GGCAGTTCTCGCGAT CCGT TCC ACGG TTTTTCTGTCGTAGA Tpet_0365 351551 - 351051 - | 3-isopropylmalate dehydratase small subunit Tpet_0366 352809 - 351556 - | 3-isopropylmalate dehydratase, large subunit TERM 383 352616 - 352659 + g 81 -8.3 -4.42062 | gap 1 ATGTCCTTGTTGGGG GTGAAGTGATCCGGAACGAG CACCA CTCTGTCTGGAT-ACTTCAC TTTCTTTCCACCGTA Tpet_0367 354352 - 352811 - | 2-isopropylmalate synthase TERM 384 353484 - 353494 + g 77 -6.8 -4.55295 | AGGAACACGTTCTCT CCCA CTA TGGG TTTGTTTCTGGACGG Tpet_0368 355955 - 354339 - | alpha-isopropylmalate/homocitrate synthase family transferase Tpet_0369 357632 - 355968 - | dihydroxy-acid dehydratase TERM 385 357096 - 357106 + g 74 -6.8 -4.25458 | CGCGAGGTCTTCTAT CGCT TTG AGCG TTTCTTCATCGACTT Tpet_0370 358632 - 357622 - | ketol-acid reductoisomerase TERM 386 358324 - 358344 + g 100 -8.3 -5.1104 | GTGGGCGAACATCAG CATCTTACC CTC GGTGAGGTG TTTTTCTATGTATTT Tpet_0371 359147 - 358632 - | acetolactate synthase 3 regulatory subunit Tpet_0372 360889 - 359144 - | acetolactate synthase, large subunit, biosynthetic type Tpet_0373 361061 - 363280 + | aspartate kinase Tpet_0374 363280 - 364326 + | threonine synthase Tpet_0375 364323 - 365168 + | homoserine kinase Tpet_0376 365180 - 365914 + | ABC transporter related Tpet_0379 368256 - 367126 - | malate dehydrogenase TERM 387 367261 - 367271 + g 80 -5.4 -5.0133 | AAGCATGTTCTTTGT GATC TTC GATC TTTTTTCCACAGCTC TERM 388 367905 - 367919 + g 72 -5 -4.68456 | opp_overlap 367905 AGCTCGGCTCTAAAC TCTTCA CAA TGGAGA TTATTTTTTCCTCAT Tpet_0380 368756 - 368262 - | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit Tpet_0381 369564 - 368746 - | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit Tpet_0382 369610 - 370878 + | tryptophan synthase subunit beta TERM 389 371616 - 371589 - g 78 -6.4 -4.62441 | gap 1 TGGGAGAGAAAGAAA TCCACTTCGA-GT GTC ACGTTGAAGTGGA CAACATGGAACTGAA TERM 390 371693 - 371678 - g 75 -3.2 -5.19916 | overlap 371680 AAAAGATTGAAAAAA TACGGG ATAA CCCACA CCACCGTTCAGCTCG Tpet_0383 370892 - 371746 + | cation diffusion facilitator family transporter Tpet_0384 374019 - 371743 - | hypothetical protein Tpet_0385 374600 - 374016 - | hypothetical protein TERM 391 374565 - 374544 - G 74 -3.7 -5.00616 | gap 1 TTCTTTCCGAAAAAA CAACCAGCCC CCC GGG-TAGTCG AAAAACCTCAAACCT TERM 392 374752 - 374780 + r 80 -4.6 -5.31519 | gap 1, opp_overlap 374754, overlap 374752 374756 AGACAAGACACAAAG TAT-GGGAGGGAC GAAA GTCCCTCCTTGTG TTTTTATTTAGGTAT TERM 393 374756 - 374775 + r 100 -13.6 -4.22352 | opp_overlap 374754, overlap 374752 374752 AAGACACAAAGTATG GGAGGGAC GAAA GTCCCTCC TTGTGTTTTTATTTA Tpet_0386 375401 - 374784 - | hypothetical protein Tpet_0387 375989 - 375408 - | RNA polymerase factor sigma-70 TERM 394 375522 - 375539 + g 76 -4.9 -4.88407 | overlap 375522 TCCATCAAGCCATCT GAGAAAG ATCT CTTTTTC TTTTTCATTCAATAG TERM 395 375522 - 375533 + g 89 -4.4 -5.67529 | overlap 375522 TCCATCAAGCCATCT GAGA AAGA TCTC TTTTTCTTTTTCATT Tpet_0388 377541 - 375991 - | binding-protein-dependent transport systems inner membrane component Tpet_0389 378520 - 377555 - | binding-protein-dependent transport systems inner membrane component TERM 396 378096 - 378086 - G 82 -6.8 -4.73388 | AATGGCCAGGAAAAA CCCT GGA AGGG CAATTCCACTGAAAG Tpet_0390 380318 - 378579 - | extracellular solute-binding protein Tpet_0391 381503 - 380334 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 397 380735 - 380721 - G 74 -8.6 -3.87815 | opp_overlap 380709 CTGCAGTTTGAGAAA CAGGTT TAT AACCTG TGCCTGAACGGAAAC Tpet_0392 381732 - 381520 - | hypothetical protein TERM 398 381643 - 381663 + g 71 -7.5 -4.00587 | opp_overlap 381642 381644, overlap 381644 ATCTACCTTGAAAAC ACCGTCGAG TTT CTCGATGGC TTCTTTAACTCTCTT TERM 399 381662 - 381644 - G 72 -8.8 -3.65542 | opp_overlap 381643 381644, overlap 381642 TCTACCTTGAAAACA CCGTCGAG TTT CTCGATGG CTTCTTTAACTCTCT TERM 400 381644 - 381662 + g 75 -11 -2.99268 | opp_overlap 381644 381642, overlap 381643 TCTACCTTGAAAACA CCGTCGAG TTT CTCGATGG CTTCTTTAACTCTCT Tpet_0393 382670 - 381729 - | methionyl-tRNA formyltransferase Tpet_0394 383887 - 382667 - | small GTP-binding protein Tpet_0395 384173 - 383901 - | RNA chaperone Hfq Tpet_0396 385127 - 384210 - | tRNA delta(2)-isopentenylpyrophosphate transferase Tpet_0397 385888 - 385124 - | hypothetical protein TERM 401 386118 - 386147 + r 74 -9.4 -3.39142 | gap 1 ACGCGACCTCGTATT CGTCCCTC-CCAT CCTGT ATGGTGAGGGATG TTGATTCACTATCAA Tpet_0398 386727 - 386098 - | hypothetical protein TERM 402 386322 - 386335 + g 72 -5.3 -4.62069 | overlap 386302 CAGGGTCTTCCACTG CGAAA ATTT TTTCG TTTTTGAGATCGAGG hslU 388129 - 386738 - | ATP-dependent protease ATP-binding subunit Tpet_0400 388671 - 388141 - | ATP-dependent protease peptidase subunit TERM 403 388591 - 388581 - G 71 -6.8 -4.07568 | CGTTTCCCTTCAAAA CGGT CGA ACCG AAAGTGACCTGACCG TERM 404 389690 - 389674 - g 79 -4.3 -5.17353 | overlap 389675 AGAGTGAGGAAAAAA TCGGAAG AGG CTCCCGC AGTTGTCAAGTTAAG Tpet_0401 388753 - 389829 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Tpet_0402 389826 - 390755 + | putative GAF sensor protein TERM 405 390746 - 390775 + T 100 -13 -4.15565 | gap 1, opp_overlap 390746 390747, overlap 390735 390747 TGAACTCGTATCAAA G-GTGGTGTGAGG TTCTC CCTCACACCACTC TTTTGAAGTGCTCGA TERM 406 390774 - 390746 - T 100 -13.2 -3.74747 | opp_overlap 390735 390746 390747, overlap 390747 TGAACTCGTATCAAA GGTGGTGTGAGG TTCTC CCTCACACCACT CTTTTGAAGTGCTCG TERM 407 390747 - 390773 + T 100 -16.7 -3.67634 | opp_overlap 390746 390747, overlap 390735 390746 GAACTCGTATCAAAG GTGGTGTGAGG TTCTC CCTCACACCAC TCTTTTGAAGTGCTC TERM 408 390773 - 390747 - T 100 -16.7 -2.84527 | opp_overlap 390735 390747 390746, overlap 390746 GAACTCGTATCAAAG GTGGTGTGAGG TTCTC CCTCACACCAC TCTTTTGAAGTGCTC Tpet_0403 390959 - 390765 - | hypothetical protein Tpet_0404 391570 - 390956 - | hypothetical protein TERM 409 391453 - 391441 - G 84 -4.7 -5.42975 | TCAGAGAAAGAAAAA GGGTC ACA GTCCC AAGGGTGTAACTGGG TERM 410 391466 - 391488 + g 73 -10.6 -2.94726 | overlap 391461 391459 CCCAAGGGTGTAACT GGGAGATCCT GCC AGAATCTCCC TGTAATATTCTAACA TERM 411 392345 - 392314 - R 72 -8.8 -3.57246 | overlap 392300 ACGAGTAAGGAAAGA TCTTCTCCCCTGTA CGCG TTCAGGAAAGAAGA AAGAACAACCGGATC TERM 412 392619 - 392600 - R 74 -3.6 -5.16206 | AAATCAAGAGAAAAA GACTACCT GTTA AGATAATC AAACTTCTTGCCCTG Tpet_0407 393513 - 392602 - | putative radical SAM protein Tpet_0408 393585 - 395318 + | prolyl-tRNA synthetase TERM 413 395671 - 395690 + G 83 -10 -4.05026 | opp_overlap 395667 395668, overlap 395674 AGAAGTGAAGAGGGT GAACGGGG TTCT TCCCGTTC TTCTTTCACTTTCAG Tpet_0409 395315 - 396820 + | Mg chelatase, subunit ChlI Tpet_0410 397251 - 396817 - | flagellar export protein FliJ Tpet_0411 397361 - 397942 + | phage SPO1 DNA polymerase-related protein Tpet_0412 397944 - 398462 + | iron dependent repressor Tpet_0413 398459 - 399388 + | NAD-dependent epimerase/dehydratase TERM 414 399510 - 399531 + GT 100 -12.3 -5.1101 | ATCCTTTATGGACCA CCGGGGTCT GGTA AGACCTCGG TTTTTTCACTGCTGA TERM 415 400002 - 399986 - gT 78 -6.6 -4.57569 | CCAGGCGTTCAAAAA CAAGAG GGCAA CTCTTG AAGATCTGGAAACTC TERM 416 401146 - 401134 - gT 73 -4.9 -4.63107 | overlap 401128 AGGAAACAACGAAAA TTTTC GAA GAAAA GTTCAGCGTTTGATG Tpet_0414 399360 - 401159 + | fused recombination factor protein RarA/unknown domain-containing protein TERM 417 401195 - 401166 - T 86 -13.7 -2.83522 | opp_overlap 401171, overlap 401171 AGCGTTTGATGAAAC CAAAAGAAGGGGC AAAC GCCCCTTCTTTTT TTAAGACCTCTGAGG TERM 418 401190 - 401171 - T 100 -13.6 -4.58773 | opp_overlap 401171, overlap 401166 TTGATGAAACCAAAA GAAGGGGC AAAC GCCCCTTC TTTTTTTAAGACCTC TERM 419 401171 - 401190 + T 100 -13.6 -5.41143 | opp_overlap 401171 401166 TTGATGAAACCAAAA GAAGGGGC AAAC GCCCCTTC TTTTTTTAAGACCTC TERM 420 401342 - 401316 - T 100 -6.4 -5.75822 | opp_overlap 401321, overlap 401321 CAGAAAGTAAAAAAA GTAAAGGGGGCC TTT GGCCCCCTTGTT ATCATTTAGAATTCT TERM 421 401337 - 401321 - T 100 -15.1 -4.53225 | opp_overlap 401321, overlap 401316 AGTAAAAAAAGTAAA GGGGGCC TTT GGCCCCC TTGTTATCATTTAGA TERM 422 401321 - 401337 + T 100 -15.1 -3.93216 | opp_overlap 401321 401316 AGTAAAAAAAGTAAA GGGGGCC TTT GGCCCCC TTGTTATCATTTAGA TERM 423 401361 - 401377 + T 79 -3.7 -5.31275 | ATTTAGAATTCTTCA GGAATAC TCG GTGTTTC TTTTTTCTCCTCGGG Tpet_0415 402964 - 401348 - | chaperonin GroEL TERM 424 401868 - 401880 + g 76 -4.1 -4.92756 | GCGAGTTTTGCCATC CTTTC CTG GAGAG TTTCTTTTTCGTACT TERM 425 402093 - 402112 + g 70 -2.1 -5.00196 | CCTCCGGTGAGAATT GCTATGT CCTGAA GCATGGC TTTTCTTCTTTCACC Tpet_0416 403257 - 402979 - | chaperonin Cpn10 TERM 426 403451 - 403423 - H 100 -12.5 -4.65078 | opp_overlap 403429 403430, overlap 403430 AGAGGTTGAAGAAAA GTAAAAAGGCGCT TGA AGCGCCCTTTTTC TGGTGGAGGCGGGGG TERM 427 403429 - 403445 + H 87 -7.9 -4.91109 | opp_overlap 403423 403430, overlap 403430 TGAAGAAAAGTAAAA AGGCGCT TGA AGCGCCC TTTTTCTGGTGGAGG TERM 428 403430 - 403444 + H 85 -11.4 -3.54183 | opp_overlap 403430 403423, overlap 403429 GAAGAAAAGTAAAAA GGCGCT TGA AGCGCC CTTTTTCTGGTGGAG TERM 429 403444 - 403430 - H 100 -11.4 -5.17786 | opp_overlap 403429 403430, overlap 403423 GAAGAAAAGTAAAAA GGCGCT TGA AGCGCC CTTTTTCTGGTGGAG Tpet_0417 403945 - 404982 + | binding-protein-dependent transport systems inner membrane component Tpet_0418 404996 - 405937 + | binding-protein-dependent transport systems inner membrane component Tpet_0419 405950 - 406954 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpet_0420 406958 - 408112 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpet_0421 408109 - 408597 + | hypothetical protein TERM 430 409068 - 409049 - g 77 -3.6 -5.09426 | CGGAACCCGAAAAAA GAATGAAC AACT ATCCATTC GAATTCTCAGGTGGA Tpet_0422 408610 - 409602 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpet_0423 409586 - 410440 + | hypothetical protein Tpet_0424 410453 - 411013 + | DNA polymerase III, epsilon subunit TERM 431 411253 - 411225 - g 70 -5.2 -4.44974 | opp_overlap 411229, overlap 411226 411242 411243 GGAAATCTCAGAAAA GGAATCCCGCTG GAGAA CGGCGGAATTCT CCGCGTCATGGTTTT Tpet_0425 411018 - 412274 + | PhoH family protein Tpet_0426 412742 - 412239 - | putative transcriptional regulator TERM 432 412321 - 412350 + g 78 -5.2 -5.00611 | opp_overlap 412321, overlap 412321 CTTTCAACAAACGAA GGGGA-AAGCTGAT ACAG AT-AGCTTTTCCCC TTTCTTTTCTTTCTG Tpet_0427 413409 - 412720 - | chromosome segregation and condensation protein ScpA Tpet_0428 414405 - 413419 - | tryptophanyl-tRNA synthetase Tpet_0429 414472 - 415077 + | hypothetical protein Tpet_0430 415049 - 415783 + | silent information regulator protein Sir2 TERM 433 415985 - 415973 - g 80 -5.5 -5.07652 | overlap 415977 415982 TCCTCGAAAAGAAAA CCCAG GAA CTGAG AAAACTCATATCCGA Tpet_0431 415780 - 416304 + | hypothetical protein Tpet_0432 417133 - 416285 - | HemK family modification methylase TERM 434 416561 - 416573 + gT 71 -3.3 -4.87133 | opp_overlap 416552 CGAAAGGATCATCTC GATCG ATG CGAAC TTTTCTTTGAACGGT Tpet_0433 417390 - 417082 - | hypothetical protein Tpet_0434 417463 - 417747 + | hypothetical protein Tpet_0435 417719 - 418471 + | binding-protein-dependent transport systems inner membrane component Tpet_0436 418468 - 419418 + | NMT1/THI5 like protein TERM 435 419509 - 419491 - g 72 -8.8 -3.57144 | opp_overlap 419469 419466 419492, overlap 419492 CCTTGGAGGTTCAAA GGGGAGAG ATC CTCTCCCT TGTGGGACCATCCGG TERM 436 419492 - 419508 + G 81 -12.3 -3.29511 | opp_overlap 419492 419491, overlap 419469 419466 CTTGGAGGTTCAAAG GGGAGAG ATC CTCTCCC TTGTGGGACCATCCG TERM 437 419508 - 419492 - g 78 -12.3 -2.74144 | opp_overlap 419469 419466 419492, overlap 419491 CTTGGAGGTTCAAAG GGGAGAG ATC CTCTCCC TTGTGGGACCATCCG Tpet_0437 419415 - 420122 + | ABC transporter related Tpet_0438 424353 - 420106 - | putative CoA-substrate-specific enzyme activase TERM 438 422101 - 422113 + g 72 -4.7 -4.68103 | opp_overlap 422101 422099 CGAGAAATCGAAATA GCCCG TCA CGAGC TTTTCTTCCAGTTCG TERM 439 423846 - 423864 + g 76 -7.4 -4.2123 | opp_overlap 423846 423847 423849, overlap 423847 CAAGTCCGTTCAGAA CGAGTTCC TTT GGAACTCC TTTGTTCAGTGCGTG TERM 440 423863 - 423847 - G 73 -10.9 -2.57463 | opp_overlap 423846 423847, overlap 423846 423849 AAGTCCGTTCAGAAC GAGTTCC TTT GGAACTC CTTTGTTCAGTGCGT TERM 441 423847 - 423863 + g 77 -10.9 -3.12256 | opp_overlap 423847 423846 423849, overlap 423846 AAGTCCGTTCAGAAC GAGTTCC TTT GGAACTC CTTTGTTCAGTGCGT TERM 442 424269 - 424296 + g 71 -7 -4.02132 | overlap 424274 424286 TGGAAAGCAGAGCGA GGGGATCTCCGT TGTG AGGGAGATTTCC TTTCTCCCTTTCACC TERM 443 424670 - 424654 - H 74 -10.9 -2.62983 | CTCAGTGGTAGAGCA CCAGCTT GCC AAGCTGG GGGTCGCGGGTTCGA TERM 444 424710 - 424735 + H 100 -8.3 -5.42975 | opp_overlap 424713, overlap 424713 CCCGCTCCAGACAAA AAAGAAGGGGG AATT TCCCCTTCTTC TTTTTCTTTATGTCG TERM 445 424713 - 424732 + H 91 -10 -4.76311 | opp_overlap 424713, overlap 424710 GCTCCAGACAAAAAA GAAGGGGG AATT TCCCCTTC TTCTTTTTCTTTATG TERM 446 424732 - 424713 - H 100 -9.3 -5.36441 | opp_overlap 424713 424710 GCTCCAGACAAAAAA GAAGGGG GAATTT CCCCTTC TTCTTTTTCTTTATG TERM 447 425292 - 425310 + G 89 -6.6 -5.40072 | CCCGTGTTCGTTGCA GCCTTCCT TCT GGGATGGC TTTTTTTCAACGGGA TERM 448 425380 - 425400 + G 82 -11.9 -3.46138 | overlap 425382 ACCTCCTACCACTGA TACCCGTTC TGG GAACGGGTG TTCTCATACTCCTTT TERM 449 425382 - 425398 + G 81 -12.3 -3.29541 | overlap 425380 CTCCTACCACTGATA CCCGTTC TGG GAACGGG TGTTCTCATACTCCT Tpet_0439 424782 - 425915 + | hypothetical protein TERM 450 426319 - 426301 - g 79 -3.1 -5.40474 | opp_overlap 426311 426313 ACCTCTCGAAAAAAA GAGCATC GATGA GATCCTC CAGGATCTGTTCCAT TERM 451 426426 - 426407 - g 76 -4.4 -5.055 | gap 1 GGAACGTTCAAAAAA GAGATCGAA GAG TTC-ATCTC CAAAGGATTCGCGAG TERM 452 428369 - 428356 - g 76 -8.1 -4.0162 | GGCGCAGAGGATAAA GCTCG CGTC CGAGC TGAGAAAAAGGGACA Tpet_0440 425912 - 428662 + | excinuclease ABC, A subunit Tpet_0441 428682 - 428912 + | preprotein translocase, SecG subunit Tpet_0442 428917 - 430122 + | tyrosyl-tRNA synthetase Tpet_0443 430205 - 431407 + | S-layer domain-containing protein Tpet_0444 431442 - 432695 + | hypothetical protein TERM 453 432739 - 432712 - f 87 -11.2 -3.63068 | opp_overlap 432716, overlap 432716 CCACACCACCGCAAA TCAACCCCCGGC ACTT GCCGGGGGTTTT GTTTTGTTGTATAAT TERM 454 432716 - 432735 + F 100 -16.4 -5.31091 | opp_overlap 432716 432712 ACCACCGCAAATCAA CCCCCGGC ACTT GCCGGGGG TTTTGTTTTGTTGTA TERM 455 432735 - 432716 - f 100 -16.4 -3.53298 | opp_overlap 432716, overlap 432712 ACCACCGCAAATCAA CCCCCGGC ACTT GCCGGGGG TTTTGTTTTGTTGTA TERM 456 432814 - 432803 - f 72 -7.2 -4.07687 | opp_overlap 432805, overlap 432789 432804 AGCCGGTCTTGAAAA CCGG TGGG CCGG AAGGCCCGTGTGGGT TERM 457 432852 - 432865 + F 100 -9.5 -5.26119 | CCACCGCCTCCGCCA GCCCC GCAC GGGGC TTTTCTTTTTAGGGG TERM 458 433021 - 433011 - g 80 -6.8 -4.66953 | overlap 433012 TGAAGAGTTCAAAAA GGAG AAC CTCC CCATCATCACCACCC TERM 459 433082 - 433066 - g 72 -8.7 -3.68962 | CCTGAAGACAGAGAA TTCAGCC TCT GGCCGAA ACACTGTGTTGCGAA TERM 460 433315 - 433302 - g 74 -8.1 -3.92602 | CGAAGAGTTGAGAAA CAGGG ATAT CCCTG TTAAAATAATCACTG Tpet_0445 432889 - 433413 + | isochorismatase hydrolase Tpet_0446 433424 - 434719 + | nicotinic acid phosphoribosyltransferase-like protein TERM 461 435323 - 435301 - g 78 -6.2 -4.68908 | opp_overlap 435306, overlap 435303 435306 CTTACGGAAAAGAAA TAGGAGCTCC CGT GGAGCTTCTC AGGGAGGTCAAAAGA TERM 462 435321 - 435303 - g 77 -8.8 -3.95475 | opp_overlap 435306, overlap 435301 435306 TACGGAAAAGAAATA GGAGCTCC CGT GGAGCTTC TCAGGGAGGTCAAAA Tpet_0447 434733 - 435614 + | pyridoxine biosynthesis protein Tpet_0448 435618 - 436184 + | glutamine amidotransferase subunit PdxT Tpet_0449 436181 - 436810 + | putative diguanylate cyclase TERM 463 436958 - 436968 + G 82 -3.2 -5.5208 | overlap 436945 CATGTTCCTTCTCTG CGGA ACA TTCG TTTTTTCTATTGTCA TERM 464 437486 - 437469 - g 72 -2.7 -5.00642 | GAATGGACAGAAAAA TTGAAAG AAAG CGTTCAA GTACTCTGGAAAAGT TERM 465 437686 - 437700 + G 72 -2.8 -5.03747 | GTGGAGGAGTGGAAG CGGTTT ATC AGATCG TTTTTTCCAAGATTT Tpet_0450 436944 - 437840 + | integral membrane protein-like protein TERM 466 438232 - 438214 - g 80 -6.8 -4.60487 | GACTATTTTGAAAAA GAACAAAA AAG TTTCGTTC AAAGAGAGTCTTCTG TERM 467 438322 - 438345 + G 79 -2.4 -5.45652 | opp_overlap 438304 GAAACTGATAAACCC GTTACTCCTT GCAG AAGAAGGAAC TTTTTTCTTACCCAT Tpet_0451 437837 - 438430 + | hypothetical protein Tpet_0452 438423 - 438791 + | response regulator receiver protein Tpet_0453 438784 - 440121 + | stage II sporulation E family protein Tpet_0454 440121 - 440882 + | hypothetical protein TERM 468 440963 - 440973 + G 77 -6.8 -4.53163 | GTTTATAATGAAGTT CCCA CGG TGGG TTTTGTACTGTCTCC TERM 469 441049 - 441072 + G 95 -13.2 -4.13995 | overlap 441050 TTTTGCAAGTTTTTC GGAAGGGGAG CTCT CTCTCCTTCC TTTCATTTATGACAA TERM 470 441097 - 441117 + G 71 -3.3 -4.87291 | overlap 441100 TGACAATCCTGTTTA TTTTCGATT CGG AATCGATGA TTTTTCGTTCGAATA TERM 471 441241 - 441256 + G 72 -6.1 -4.2408 | overlap 441244 441245 AAATGTTTTCTTCTT CACGG AGAAAC CCGTG TTTCTCGTTTTGTCG Tpet_0455 440891 - 441607 + | hypothetical protein TERM 472 441680 - 441662 - g 83 -8.9 -4.2573 | opp_overlap 441660 441662 GAAAGAAGCTGAAAA GAGGTTC GGACT GAACCTC TCTTCTTACAAACCG TERM 473 441662 - 441680 + G 73 -9.6 -3.38812 | opp_overlap 441662, overlap 441660 GAAAGAAGCTGAAAA GAGGTTCG GAC TGAACCTC TCTTCTTACAAACCG Tpet_0456 441645 - 442397 + | protein-glutamate O-methyltransferase Tpet_0457 442398 - 442958 + | lipoprotein signal peptidase Tpet_0458 442816 - 443751 + | RluA family pseudouridine synthase TERM 474 444128 - 444108 - g 77 -6.9 -4.4648 | ATCTTCATGAGAAAA GTCTTCG GGCTCGA CGAAGAC GTTCAGGGTTTTCCG TERM 475 444330 - 444320 - g 76 -4.6 -4.96501 | GGTGATAAAAAGAAA GGGC TTC ACCC CGTACATCTACACGG Tpet_0459 443748 - 446276 + | DNA polymerase III, alpha subunit Tpet_0460 446337 - 448184 + | 4-phytase TERM 476 448189 - 448219 + T 93 -9.1 -4.93454 | gap 1, opp_overlap 448194, overlap 448191 448194 CAGAAGAGTAAAAAA TAA-AAGGGGCTCC TTTC GGAGCCCCTTCTTC TTTTCTCTTTGTTTC TERM 477 448191 - 448216 + T 100 -13.3 -4.50487 | opp_overlap 448194, overlap 448189 448194 GAAGAGTAAAAAATA AAAGGGGCTCC TTTC GGAGCCCCTTC TTCTTTTCTCTTTGT TERM 478 448213 - 448194 - T 100 -15 -5.45813 | opp_overlap 448191 448189 448194 GAGTAAAAAATAAAA GGGGCTCC TTTC GGAGCCCC TTCTTCTTTTCTCTT TERM 479 448194 - 448213 + T 100 -15 -4.30704 | opp_overlap 448194, overlap 448191 448189 GAGTAAAAAATAAAA GGGGCTCC TTTC GGAGCCCC TTCTTCTTTTCTCTT Tpet_0461 453307 - 448235 - | DNA-directed RNA polymerase, beta' subunit TERM 480 452381 - 452395 + g 75 -2.8 -5.11033 | overlap 452382 GAGGCTGGTAGAAGT CGTGAT CTG ATCACC TTTTTTCACCTTCTG Tpet_0462 457115 - 453324 - | DNA-directed RNA polymerase, beta subunit TERM 481 454370 - 454380 + g 74 -5.4 -4.60255 | CTCTGATGATTCCGT TCTC GTC GAGA TTTTTCAGGAGTTCT TERM 482 457147 - 457166 + r 71 -4.9 -4.45664 | opp_overlap 457146 457147 GTGGAATAAGAAACT CCCAGGA TTTCTC TCCCGGG TTTTGCTTAGATTGA TERM 483 457275 - 457248 - R 100 -15.6 -5.30339 | opp_overlap 457242 ATTAAAACACAAAAA CCCTGTACCGGC AAGA GGCGGTACAGGG TTGAAACATTCTTTT TERM 484 457331 - 457342 + r 80 -4.4 -5.17744 | overlap 457337 TCTACCTCAGCACCG GCTT CTTC AAGC TTTTTCTTGATATCT Tpet_0463 457692 - 457306 - | ribosomal protein L7/L12 TERM 485 457396 - 457410 + g 72 -4.9 -4.57073 | GCTCTTAATGATTGC GTCGG GTGAA CCGGC TTTTTCAACGAGATC Tpet_0464 458247 - 457708 - | ribosomal protein L10 TERM 486 458297 - 458270 - R 100 -17.2 -5.75945 | opp_overlap 458277 458279 ACCTCCCAAAAAAAA TTTTGTGGACCC CGGA GGGTCCACAAAA AGGTCATAGAACCTT rplA 459090 - 458389 - | 50S ribosomal protein L1 Tpet_0466 459539 - 459114 - | ribosomal protein L11 TERM 487 459557 - 459581 + r 73 -6.4 -4.43501 | gap 1, overlap 459541 TCGAACCTCCCTATG CGTGGTGCGGA TTCC TCCTC-CCACG TTTTCTCACTCGATT Tpet_0467 460648 - 459587 - | NusG antitermination factor TERM 488 459953 - 459966 + g 70 -5.3 -4.46656 | GAATACGTAACCAGG GAAGA GTTT TCTTC TTTTCGTCTTGTAAA Tpet_0468 460857 - 460660 - | preprotein translocase, SecE subunit TERM 489 460747 - 460734 - G 81 -3.8 -5.27709 | overlap 460745 GCACAAAAAAATAAA CGCT TGTAAC AGCG AGTATCACGAGAACA TERM 490 460894 - 460884 - R 74 -2.4 -5.21709 | overlap 460886 CCTCAGATCAAAAAA TGGC AGG GCCG GCAGGACTCGAACCC Tpet_0469 461113 - 460964 - | ribosomal protein L33 TERM 491 461027 - 461037 + g 80 -6.8 -4.61747 | GTACTTTCTCAGTTC GAGC TTT GCTC TTTTGTCCTTGTTCC TERM 492 461503 - 461487 - H 100 -12.3 -4.20868 | opp_overlap 461490 GTGTTAAAATAATAA GGAGAGC CGT GCTCTCC TTCAGGAACTGGTGG TERM 493 461777 - 461763 - g 73 -2.1 -5.10497 | overlap 461764 AACGGATCGAAAAAA CGATC GTCAA GATCA TGACCAAAAAGGAGG Tpet_0470 461645 - 461797 + | hypothetical protein TERM 494 461812 - 461788 - f 100 -12.9 -4.78107 | opp_overlap 461785, overlap 461789 GATCATGACCAAAAA GGAGGGCTGAA AAC TTCAGCCCTCT AAGCTTATATGTTAG TERM 495 461811 - 461789 - f 100 -16.4 -3.46141 | opp_overlap 461785, overlap 461788 ATCATGACCAAAAAG GAGGGCTGAA AAC TTCAGCCCTC TAAGCTTATATGTTA thyX 461888 - 462550 + | FAD-dependent thymidylate synthase TERM 496 462839 - 462813 - g 72 -6.6 -4.26903 | opp_overlap 462802 CTCACTGGAGGAAAA TCCAGTTGTCAA AGA TTGGAAACTGGA AATAGAGGGCCCTGG TERM 497 462885 - 462871 - g 85 -6.4 -5.24129 | overlap 462883 CTGGTGGACAAAAAA GAACTC AAA GAGCTC GTTAAAATCGAGAAA TERM 498 463139 - 463155 + G 82 -7.9 -4.59773 | GAGACTTCTATTCTT CCTCTCC ACT GGTGAGG TTTTTCACCATGAGC TERM 499 463813 - 463799 - g 79 -4.2 -5.11937 | AAGAAGCGGAAAAAA CGAGGA ATT TCATCG GTGGAATTGGATGGA Tpet_0472 462547 - 464682 + | surface antigen (D15) TERM 500 465170 - 465157 - g 79 -3.1 -5.31275 | GTTCATCATAAAAAA CGAAA AAGA TCTCG AAAACGCTATAAAAG TERM 501 465781 - 465762 - g 75 -10 -3.60502 | overlap 465776 465777 ACAGAGACGTTGAAA GAGCGCTC GAAA AAGCGCTC AGAGCGAAGAAAATA Tpet_0473 464696 - 465838 + | phosphoribosylaminoimidazole carboxylase ATPase subunit Tpet_0474 465826 - 466341 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 502 466414 - 466437 + F 95 -8.1 -5.38054 | opp_overlap 466415, overlap 466405 466415 ACCGAGGGGGAACTC ACCCCTTCG GTCGTG CGAAGGGGA TTTTTCTTTATAGAG TERM 503 466436 - 466415 - f 77 -11.6 -2.53263 | opp_overlap 466405 466414 466415 CCGAGGGGGAACTCA CCCCTTCG GTCGTG CGAAGGGG ATTTTTCTTTATAGA TERM 504 466415 - 466436 + F 91 -11.6 -3.81748 | opp_overlap 466415, overlap 466405 466414 CCGAGGGGGAACTCA CCCCTTCG GTCGTG CGAAGGGG ATTTTTCTTTATAGA Tpet_0475 466462 - 467676 + | small GTP-binding protein TERM 505 467847 - 467823 - g 72 -2.8 -5.03314 | gap 1, overlap 467824 467825 TTCATGGTGAAAAAA GC-CTGCGCCC TTTT GAACACAGAGC TCGGTTATCTGGACG TERM 506 468191 - 468179 - g 71 -7.7 -3.91882 | overlap 468174 TCAGGAGAAAGAGAA GGAGT TCT ACTCC ATAAGAAAACCAGGA TERM 507 468644 - 468629 - g 74 -3.9 -4.91852 | GCCAGGAAAAATAAA CCCGG TTGTTC CCGAG TACGTGATGCAAATC aspA 467673 - 469049 + | aspartate ammonia-lyase Tpet_0477 470467 - 469037 - | carbohydrate kinase, FGGY TERM 508 469745 - 469721 - G 71 -7.7 -3.98159 | overlap 469714 469716 CATGACAACACGAAA CGCGCCGCTCG TTC CGATCGTCACG GTGGCTGAATCAGGA TERM 509 470052 - 470063 + g 73 -2.2 -5.1356 | ATCGAACAGAACTTT TTCG CATT CGAG TTTTTCTTCATCCAC Tpet_0478 471747 - 470464 - | hypothetical protein TERM 510 470973 - 470994 + g 71 -3.7 -4.80882 | gap 1, overlap 470973 470974 TGTATTTCACGTGAA G-TTGAGAGC TGA GCTCGCAAGC TTTTTCGTATGCCCT TERM 511 471640 - 471654 + g 75 -2.8 -5.2696 | GCGGGTGTAATCTGT GTGC ACCACCA GCAC TTTTTTCACTTTTCC Tpet_0479 472519 - 471761 - | short-chain dehydrogenase/reductase SDR Tpet_0480 473970 - 472525 - | hypothetical protein Tpet_0481 474621 - 473977 - | GntR family transcriptional regulator TERM 512 474429 - 474419 - G 88 -5.4 -5.60993 | TCGGTTACAAAAAAA CCAA CCC TTGG AACCACCTTCACAAG Tpet_0482 476027 - 474618 - | 6-phosphogluconate dehydrogenase TERM 513 475886 - 475896 + g 74 -5.4 -4.60255 | GTTCTATCTCTTCAT TCGT TAC ACGA TTTTTCACAAATTCT TERM 514 476058 - 476078 + r 72 -6.9 -4.20042 | opp_overlap 476058 TTTTATTTCAGCAGA GCTTTACCT TCG ATGTAAAGC TTTTCGAATCTTGAT Tpet_0483 477385 - 476045 - | glycoside hydrolase family protein Tpet_0484 478491 - 477388 - | alcohol dehydrogenase TERM 515 480104 - 480092 - g 83 -6.3 -5.09173 | CAACAGTGGAAAAAA TTTGG AAT CCAAA TTGAAATAAGACCAA Tpet_0485 478691 - 480550 + | extracellular solute-binding protein TERM 516 480574 - 480594 + F 100 -12.5 -4.08216 | opp_overlap 480564 480563, overlap 480576 480577 AAAATCTGAATTTTT CAGGGGGGG CCT CCCCCCCTA TTTTGGAGGAGGTCC TERM 517 480576 - 480592 + F 100 -15.1 -3.63922 | opp_overlap 480563, overlap 480574 480577 AATCTGAATTTTTCA GGGGGGG CCT CCCCCCC TATTTTGGAGGAGGT TERM 518 480919 - 480929 + G 80 -5.4 -5.02074 | TGTGAAATCTATTAT CAGA GAA TCTG TTTTTTGGACAATAG Tpet_0486 480614 - 481621 + | binding-protein-dependent transport systems inner membrane component Tpet_0487 481632 - 482486 + | binding-protein-dependent transport systems inner membrane component TERM 519 483435 - 483415 - g 72 -4.7 -4.62085 | AGGTGCAAAAAAGAA GTACCCCCT CTC AAGGAATAC CTGCCGGGCCACAGA Tpet_0488 482488 - 483495 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 520 483544 - 483505 - g 81 -3.6 -5.36441 | gap 1 TCTTGAGATAAAAAA TCTGACGAAGATCTTCACC ATA GG-GAGCATCTTCTCCAGA ACGAGAATAGTGGCT TERM 521 483746 - 483735 - g 76 -4.4 -4.98128 | overlap 483743 AGAACGAAAAAGAAA GAAG AGAG CTTC TAAAAGAAATACAGG TERM 522 484310 - 484298 - g 79 -7.7 -4.49981 | GACATCAGGATAAAA CTGTC CGA GACAG AGCAGGCAGAGTATC Tpet_0489 483482 - 484444 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 523 485127 - 485111 - g 86 -2.9 -5.65177 | overlap 485112 485122 AGAGGCAGAAAAAAA GGTCAGA ACA TCCGACA GATTCGTCGAGGAGG Tpet_0490 484470 - 486164 + | Beta-glucuronidase Tpet_0492 487102 - 488373 + | NADH:flavin oxidoreductase/NADH oxidase TERM 524 488840 - 488829 - g 74 -5.8 -4.59109 | TACATGTGCGAAAAA CTCC TGGA GGAG ATCAGAAGAAAGGGT TERM 525 489418 - 489407 - g 74 -7.2 -4.32177 | GGATTTCACAAGAAA CCCC AGCT GGGG AAGCAAAAACGGGGA Tpet_0493 488370 - 490364 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 526 490865 - 490845 - g 83 -9.7 -4.07568 | CGGTTCTTTTTAAAA CTCTTGTCC TCT GGCCAAGAG ATACGGCTTATTACA TERM 527 491582 - 491566 - g 89 -10.9 -4.17491 | overlap 491558 AGTAAAGCTTGAAAA CTTCGAG GGG CTCGAAG GGGAGATAACATGCT Tpet_0494 490361 - 491599 + | oxidoreductase domain-containing protein TERM 528 491803 - 491791 - g 88 -3.3 -5.69262 | opp_overlap 491791 TTAGAAAAAGAAAAA CCCGA TAT TCTGG TTATAAATACCGTTT Tpet_0495 491593 - 492579 + | oxidoreductase domain-containing protein TERM 529 492653 - 492664 + G 75 -3 -5.24129 | TCCTCATCGGCTACA CTTT GGGG AAAG TTTTTTCTGAAGAAA TERM 530 492864 - 492850 - g 83 -4.2 -5.37345 | overlap 492853 TTCAAGGAGAAAAAA GAAGTG ATT CACGTC ACCGCAGTTACCGCA TERM 531 492895 - 492907 + G 75 -6.3 -4.38748 | overlap 492893 AACGTTGGCTATTTG GGATA TCC TATCC TTCTTTCTTTGTGGG Tpet_0496 492592 - 493482 + | auxin efflux carrier gldA 493769 - 494863 + | glycerol dehydrogenase Tpet_0499 495770 - 494856 - | xylose isomerase domain-containing protein TERM 532 495510 - 495520 + g 75 -3.2 -5.09762 | opp_overlap 495500, overlap 495499 CATAACCTGGTAGTG CCAG GGA TTGG TTTTTATCTTCAGAT Tpet_0500 496868 - 495789 - | ABC transporter related Tpet_0501 497716 - 496868 - | binding-protein-dependent transport systems inner membrane component TERM 533 497117 - 497099 - G 79 -8.8 -4.17878 | opp_overlap 497095, overlap 497095 GGAAAGGAAAGCAAA GATGGCCG TAA CGGCGATC CCTGGTTTTACAAGT Tpet_0502 498600 - 497716 - | binding-protein-dependent transport systems inner membrane component TERM 534 498643 - 498619 - R 100 -16.5 -4.4009 | GTTCACCCCACAAAA GGAGTGAGGGA AAC CCCCTCACTCC ACGATCACAACCCTA Tpet_0503 499968 - 498637 - | extracellular solute-binding protein TERM 535 499939 - 499929 - G 77 -6.8 -4.4261 | overlap 499931 CTGCGAACATCAAAA GACC TAT GGTC AAGATGATCACAAGT Tpet_0504 500990 - 500178 - | xylose isomerase domain-containing protein Tpet_0505 501813 - 500956 - | ribokinase-like domain-containing protein Tpet_0506 502814 - 501810 - | oxidoreductase domain-containing protein Tpet_0507 503754 - 502819 - | creatininase TERM 536 503595 - 503615 + g 77 -11.1 -3.22851 | overlap 503593 503611 ATGCGACCTGCTCGG CCATCCTCG TGA CGAGGAAGG TATCTTCTCCTGTTG Tpet_0508 504985 - 503801 - | alcohol dehydrogenase Tpet_0509 506090 - 504999 - | ROK family protein TERM 537 506211 - 506187 - R 73 -5.1 -4.71791 | opp_overlap 506179, overlap 506179 506188 506205 AGAGTAAGAAACAAA CGTTTCCTTTC ATC AAAAGAAAACA ATCGCCTGAAAGGGA Tpet_0510 506694 - 506233 - | hypothetical protein Tpet_0511 507506 - 506691 - | peptidase M23B TERM 538 507504 - 507492 - G 77 -3.4 -5.24003 | AAGAAAAAGCAAAAA GAAG CCTCT CTTC ATCCTCCCCATCCTT Tpet_0512 508554 - 507520 - | chemotaxis-specific methylesterase Tpet_0513 508999 - 508517 - | diacylglycerol kinase TERM 539 508946 - 508969 + gr 75 -9 -3.62176 | opp_overlap 508938, overlap 508960 TAAGGCATTTTCTAT TCCTTCAAAG GCGT TTTTGAAGGA TTTCAAAATATTATT Tpet_0514 509582 - 508980 - | pyruvate ferredoxin/flavodoxin oxidoreductase Tpet_0515 510379 - 509579 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta Tpet_0516 510885 - 510376 - | CMP/dCMP deaminase, zinc-binding TERM 540 510590 - 510612 + g 70 -9.8 -2.97902 | TGCATCAATGCGTTC TGCTCCGCGT GTA GCGCGTAGCA TATCTCCTGGTGTTC TERM 541 510920 - 510944 + r 72 -8.5 -3.58766 | opp_overlap 510921, overlap 510921 TGTATCACAAACAAA AGCGAGGGC TTTACGT GCCCTCGCC TTCTGTAGTATAATT TERM 542 510921 - 510943 + r 79 -12 -2.74537 | opp_overlap 510921, overlap 510920 GTATCACAAACAAAA GCGAGGGC TTTACGT GCCCTCGC CTTCTGTAGTATAAT TERM 543 510943 - 510921 - R 100 -12 -5.02323 | opp_overlap 510920 510921 GTATCACAAACAAAA GCGAGGGC TTTACGT GCCCTCGC CTTCTGTAGTATAAT TERM 544 511018 - 510997 - R 93 -10.1 -5.03314 | overlap 510998 GGGAGGCCGAAAAAA GGGGAGGAG GTTT CTCCTCCCG AAAGGAAACCTTATC TERM 545 511017 - 510998 - R 100 -13.6 -3.61506 | overlap 510997 GGAGGCCGAAAAAAG GGGAGGAG GTTT CTCCTCCC GAAAGGAAACCTTAT Tpet_0517 511370 - 511029 - | nitrogen regulatory protein P-II Tpet_0518 512691 - 511384 - | ammonium transporter TERM 546 511831 - 511807 - G 72 -10.7 -2.8779 | opp_overlap 511819, overlap 511809 511819 AGAACTCACAGGAGA CACCACAGCAC ACG GTGCGGTGATG GCAACAAGGCCAGCA TERM 547 512815 - 512783 - H 71 -4.4 -4.59511 | opp_overlap 512797, overlap 512790 512794 512797 AATATTCTTGAAAAA CAA-AAAACAAACACC ATG GG-GTTCGTTTTCTTG AGGGTACAAACCCCA TERM 548 512807 - 512790 - H 100 -2.7 -5.93252 | gap 1, opp_overlap 512797, overlap 512783 512794 512797 TTGAAAAACAAAAAA CAAACACC ATG GG-GTTCG TTTTCTTGAGGGTAC TERM 549 512835 - 512794 - H 87 -6.7 -5.29208 | opp_overlap 512797, overlap 512790 512783 512797 512827 AAAACAAAAAACAAA CACCATGGGGTTCGT TTTCTTGAGGGT ACAAACCCCATGTTG GATTGGATATTTATT TERM 550 512797 - 512832 + H 70 -9 -3.2128 | opp_overlap 512790 512783 512794 512797 512827 ACAAAAAACAAACAC CATGGGGTTCGTTTTC TTGA GGGTACAAACCCCATG TTGGATTGGATATTT Tpet_0519 512998 - 513552 + | thymidine kinase Tpet_0520 514753 - 513536 - | integral membrane sensor signal transduction histidine kinase TERM 551 514390 - 514419 + g 82 -11.5 -3.58037 | AAATCCTGTAGTTCC CTTCCGTGGAAAA CCCC TCTTCCACGGGAG TTTCGGGAGTTCCTA TERM 552 514524 - 514510 - G 88 -8.6 -4.83615 | CACGTGGCACAAAAA GAGGAT CCA ATCCTC TGAACGTGCGGAGCA TERM 553 514691 - 514713 + g 76 -4.9 -4.83169 | opp_overlap 514691 TATAGAAAGTGTAAA CACAGCT GTCCAGATG AGCTGTG TTTTTCTGAAAGCCT Tpet_0521 515405 - 514734 - | two component transcriptional regulator TERM 554 515599 - 515617 + H 100 -14.6 -5.38054 | opp_overlap 515599 CCTCCCAGCCAGAAA GGGGATGC AAT GCATCCCC TTTTTCTTTATCCAC TERM 555 515617 - 515599 - H 100 -14.6 -3.91897 | opp_overlap 515599 CCTCCCAGCCAGAAA GGGGATGC AAT GCATCCCC TTTTTCTTTATCCAC Tpet_0522 515758 - 516945 + | glutamine amidotransferase, class-II Tpet_0523 516938 - 518461 + | glutamate synthase (NADPH) Tpet_0524 518455 - 518913 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 556 518997 - 518982 - g 71 -7.6 -3.94381 | AGAGAAGTTGACAAA GAAGGA GAAA TCCTTC TGATCACGGCAGAGA Tpet_0525 518910 - 520187 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 557 520449 - 520437 - g 71 -3.3 -4.77157 | overlap 520419 520438 TGAACGCAGGAAAAA TCGTG GTT CACGG GCACGCGGGCGACAT Tpet_0526 520175 - 520912 + | glutamate synthase alpha subunit TERM 558 520940 - 520917 - T 100 -12.4 -5.14965 | opp_overlap 520919, overlap 520919 ATGCGTATTAAAAAA GAGCTCCCGG GATT CCGGGAGCTT ATTTCACAATATAAG TERM 559 520938 - 520919 - T 100 -15 -4.20707 | opp_overlap 520919, overlap 520917 GCGTATTAAAAAAGA GCTCCCGG GATT CCGGGAGC TTATTTCACAATATA TERM 560 520919 - 520938 + T 100 -15 -3.93256 | opp_overlap 520919 520917 GCGTATTAAAAAAGA GCTCCCGG GATT CCGGGAGC TTATTTCACAATATA Tpet_0527 522054 - 520939 - | ROK family protein Tpet_0528 523279 - 522059 - | glycosyl transferase, group 1 TERM 561 523165 - 523201 + g 89 -4.5 -5.74122 | overlap 523167 AGGCAGTCGCATTGA CGTGAAGAACCTTTT TTCCTTT AAGAGGTTCTGCAAG TTTTTTTATCTCGTC TERM 562 524267 - 524295 + H 100 -9.6 -5.4756 | opp_overlap 524273, overlap 524273 ATGAGAGCACTATTT CACGAAGCAGGG GAAAA CCCTGCTTTTTG TTTTTTGTTAAAATT TERM 563 524273 - 524289 + H 100 -9.4 -5.84011 | opp_overlap 524273, overlap 524267 GCACTATTTCACGAA GCAGGG GAAAA CCCTGC TTTTTGTTTTTTGTT TERM 564 524289 - 524273 - H 72 -9.4 -3.17212 | opp_overlap 524273 524267 GCACTATTTCACGAA GCAGGG GAAAA CCCTGC TTTTTGTTTTTTGTT TERM 565 524457 - 524443 - g 76 -8.6 -4.07618 | TGGGCAAGAAGGAAA GAGATC GTC GATCTC ATAAATGTTTCACAC TERM 566 524817 - 524788 - g 75 -6.5 -4.4595 | gap 1, opp_overlap 524792, overlap 524791 524792 GGAGAAAATTCAAAA GAACTTCAAAGGAG AAT CTCCTCTG-AGTAC TTCAGGGTGTACACC TERM 567 524814 - 524791 - g 74 -6.8 -4.31549 | gap 1, opp_overlap 524792, overlap 524788 524792 GAAAATTCAAAAGAA CTTCAAAGGAG AAT CTCCTCTG-AG TACTTCAGGGTGTAC Tpet_0529 524293 - 525309 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 568 525519 - 525504 - g 89 -4 -5.71712 | TTGGAGACAAAAAAA TTCTCG TTAT CAAGAA GACCGAGAAAGAAAT Tpet_0530 525416 - 526747 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tpet_0531 526772 - 527107 + | alkylhydroperoxidase TERM 569 527112 - 527132 + F 100 -12.5 -3.85698 | opp_overlap 527113, overlap 527113 TCGGAAAATGAAATA ACCCCTCCC TTT GGGAGGGGG TTTCTCAGGAGGGAA TERM 570 527131 - 527113 - f 100 -16 -4.21465 | opp_overlap 527112 527113 CGGAAAATGAAATAA CCCCTCCC TTT GGGAGGGG GTTTCTCAGGAGGGA TERM 571 527113 - 527131 + F 100 -16 -2.91276 | opp_overlap 527113, overlap 527112 CGGAAAATGAAATAA CCCCTCCC TTT GGGAGGGG GTTTCTCAGGAGGGA Tpet_0532 527153 - 528502 + | dihydrolipoamide dehydrogenase Tpet_0533 529141 - 528479 - | HhH-GPD family protein TERM 572 528550 - 528562 + g 78 -4.9 -5.09173 | CACCGCACTTCGGAG TTTTG CTG CAAAA TTTTTTCGCGTGTTC TERM 573 528778 - 528752 - G 73 -10.9 -2.67747 | opp_overlap 528752, overlap 528751 GGCGTAGAGCAGAAT GGCATCGGC GGTTTCTTT GCCGATGCC TTTTATTTTGAGGAG TERM 574 528752 - 528778 + g 100 -12.3 -5.07652 | opp_overlap 528752 528751 GGCGTAGAGCAGAAT GGCATCGGCGG TTTCT TTGCCGATGCC TTTTATTTTGAGGAG TERM 575 528871 - 528884 + g 78 -5.9 -4.77698 | opp_overlap 528871 TGAGAAATTTCAACA GTGCC TTGA GGCGC TTTGTTTTGATGTTG Tpet_0534 529170 - 529670 + | nitroreductase TERM 576 529756 - 529741 - f 80 -7.6 -4.57304 | ATGTAACTAAACAAA CCACAA TATA TTGTGG TAAAATCTTAGCAGA Tpet_0535 529802 - 530347 + | anaerobic ribonucleoside-triphosphate reductase activator Tpet_0536 530313 - 532268 + | anaerobic ribonucleoside triphosphate reductase TERM 577 532293 - 532273 - f 74 -10.3 -3.19653 | opp_overlap 532274, overlap 532274 TCAGAAGGTGATCAA GCCCCCGCA CAA CGCGGGGGT TTTTTGTGGTACAAT TERM 578 532292 - 532274 - f 86 -13.8 -2.51471 | opp_overlap 532274, overlap 532273 CAGAAGGTGATCAAG CCCCCGCA CAA CGCGGGGG TTTTTTGTGGTACAA TERM 579 532274 - 532292 + F 100 -13.1 -5.31275 | opp_overlap 532274 532273 CAGAAGGTGATCAAG CCCCCGC ACAAC GCGGGGG TTTTTTGTGGTACAA Tpet_0537 532350 - 533315 + | nitroreductase Tpet_0539 535390 - 534305 - | ABC-2 type transporter Tpet_0540 536292 - 535387 - | ABC transporter related TERM 580 536309 - 536325 + H 75 -5 -4.87133 | opp_overlap 536309, overlap 536304 536311 CATTGAAACAAAAAA GCGCCC CTCAC GGGCAC TTTTGTTTAAAGGAT TERM 581 536325 - 536309 - H 100 -7.2 -5.65927 | opp_overlap 536309 536304 536311 CATTGAAACAAAAAA GCGCCC CTCAC GGGCAC TTTTGTTTAAAGGAT TERM 582 536564 - 536548 - H 71 -7.9 -3.72642 | opp_overlap 536547 AAGGAACTATTGAAA CGCGGGA TTA TCCGGCG GGCTTTTGGTGTGCT TERM 583 536693 - 536683 - H 71 -8.2 -3.72642 | AAGGAACTATTGAAA CCGC TCG GCGG CGTAGGCTGGGCTGT Tpet_0541 537842 - 538567 + | hypothetical protein Tpet_0542 538646 - 539233 + | propanediol utilization protein TERM 584 539262 - 539245 - T 100 -12.7 -5.86609 | opp_overlap 539245 CTAAAAAAATAAAAA GGGGAGC GTTC GCTCCCC TTACTCCTGAACTTC TERM 585 539245 - 539262 + T 86 -12.7 -3.22223 | opp_overlap 539245 CTAAAAAAATAAAAA GGGGAGC GTTC GCTCCCC TTACTCCTGAACTTC Tpet_0543 539706 - 539263 - | heat shock protein Hsp20 Tpet_0544 541512 - 539722 - | chaperone protein DnaK TERM 586 543830 - 543815 - g 75 -6.2 -4.39998 | opp_overlap 543814 543811 GATTCAGATAAGAAA TTCCTT TGAA AAGGAA GTCCTTCATGTGAAA TERM 587 544529 - 544515 - g 78 -5.6 -4.88711 | ATAAGACAGGAAAAA GGTCTC TTA GAGGCC ACACTTGAAGGTGCT Tpet_0545 541722 - 544748 + | acriflavin resistance protein TERM 588 544775 - 544737 - T 73 -4.6 -4.81212 | opp_overlap 544744 544746, overlap 544746 544750 GCGATCAGAAGAAAA GTCAGAGTATAGATGAGA GCT TCTCAACTATCTTCTCAC AGCTTTCTGGATCGC Tpet_0546 545196 - 544738 - | arginine repressor, ArgR Tpet_0547 545368 - 546096 + | hypothetical protein Tpet_0548 546093 - 546539 + | transcriptional regulators-like protein TERM 589 546540 - 546560 + T 87 -10.4 -4.36914 | ATTCAGAAACTGTGA GGCGGGGA ATCAA TCCCCGTC TTTTGTGAACAGAAG Tpet_0549 547658 - 546549 - | major facilitator transporter TERM 590 547770 - 547748 - R 100 -14.2 -3.3858 | opp_overlap 547752, overlap 547752 AAATGAAGTGTAGAA GAAACCCGCC TGA AGCGGGTTTC TAATGAATTTGAAGA TERM 591 547752 - 547766 + r 76 -8.5 -4.00476 | opp_overlap 547748 547752 GAAGTGTAGAAGAAA CCCGC CTGAA GCGGG TTTCTAATGAATTTG TERM 592 547766 - 547752 - R 85 -9.2 -4.33248 | opp_overlap 547752, overlap 547748 GAAGTGTAGAAGAAA CCCGCC TGA AGCGGG TTTCTAATGAATTTG Tpet_0550 549780 - 547798 - | methyl-accepting chemotaxis sensory transducer TERM 593 548203 - 548220 + g 72 -2.7 -5.02606 | TTTTTCCGTCGCACT CTTGC TCTCTTCT GCAAG TTTTCTTATTTCATC TERM 594 549632 - 549652 + g 95 -11.9 -4.11897 | AGTGCATCGGCACTC CCTTCTGAC TGT GTCAGGAGG TTTATATCAGTTTGT Tpet_0551 550505 - 549828 - | hypothetical protein Tpet_0552 551118 - 550477 - | endonuclease III TERM 595 550847 - 550884 + gr 90 -9.1 -4.71061 | overlap 550848 CTTCCGCCGTACCTT TCCACGAGGATCCTGGA TATC TCCACGATTCTCGCGGC TTTTTGCCTGTACAT TERM 596 550848 - 550883 + gr 90 -12.6 -3.41913 | overlap 550847 TTCCGCCGTACCTTT CCACGAGGATCCTGGA TATC TCCACGATTCTCGCGG CTTTTTGCCTGTACA TERM 597 550991 - 550971 - GR 71 -8.3 -3.53012 | opp_overlap 550970 550966 550971, overlap 550980 GCGGTGTTCTGTAAA CTTCGAAGA GCT TCTTCGACG CTTTCTCTGTGTTCT Tpet_0553 552483 - 551128 - | putative aminopeptidase 1 Tpet_0554 553808 - 552483 - | alpha amylase, catalytic region TERM 598 552640 - 552624 - G 73 -4.3 -4.82901 | overlap 552625 CTCTTTGCACAAAAA TTCGAGC TTT GCCCGAT CGATCCACTGGTTTT TERM 599 552760 - 552742 - G 77 -8.8 -3.87373 | GAGATGCCGGAGAAA GGCCCG TTGTACG CGGGCC ACTTCCAGAAGGTCT Tpet_0555 555454 - 553805 - | fibronectin-binding A domain-containing protein TERM 600 554664 - 554674 + g 80 -6.8 -4.61633 | ACAAATTCGTTGATA CCCT CGG AGGG TTTTTCAAAGTATCT TERM 601 554767 - 554779 + g 73 -7.7 -4.04157 | overlap 554769 AATAAACAAACACTC CTGGA AGT TCCAG TTCCTTTTTTATTCC TERM 602 554769 - 554783 + g 82 -2.8 -5.5604 | overlap 554767 TAAACAAACACTCCT GGAAGT TCC AGTTCC TTTTTTATTCCTTCG TERM 603 555249 - 555277 + g 84 -8.3 -4.58395 | gap 1, opp_overlap 555252 555255 AGAAGCATTGTGAAC GAAGAAGGCATC TTCTCC GATGCCT-CTTC TTTTTCGGCGATCGC TERM 604 555374 - 555357 - G 72 -5.6 -4.37507 | opp_overlap 555357 555358 AAAAGAAAATAATAA TCAACC GTCGTT GGTTGA TAGATCTGTCTCAAG Tpet_0556 556319 - 555456 - | apurinic endonuclease Apn1 TERM 605 555824 - 555834 + g 74 -5.4 -4.63527 | overlap 555815 CTTTTTGATCGACGA GATC TCT GATC TTTTTCAGCTGATCC Tpet_0557 556375 - 556698 + | hypothetical protein Tpet_0558 557045 - 556695 - | MazG nucleotide pyrophosphohydrolase Tpet_0559 557938 - 557039 - | biotin synthase Tpet_0560 558018 - 559088 + | glycosyl transferase, group 1 TERM 606 559104 - 559086 - T 75 -8.8 -3.81689 | opp_overlap 559086, overlap 559075 AAGACCATCACCAAA TGAGGGGG TAG CCTCCTCA TTTTTTCACCAGCAC TERM 607 559086 - 559104 + T 100 -11 -5.00616 | opp_overlap 559075 559086 AAGACCATCACCAAA TGAGGGGG TAG CCTCCTCA TTTTTTCACCAGCAC Tpet_0561 560010 - 559102 - | diacylglycerol kinase, catalytic region TERM 608 559170 - 559152 - G 73 -2.4 -5.10933 | TTATTGAAAAGAAAA TCTTCTTG GCC CAGAAAGA TTCACCATCGAATTC Tpet_0562 560219 - 560013 - | hypothetical protein TERM 609 560256 - 560274 + r 93 -11.7 -4.13037 | opp_overlap 560256 ATTCTACCAAAAAAA GGGCAGG AAATC CCTGCCC TTCTTTAGTGTTTCT TERM 610 560274 - 560256 - R 100 -12.4 -5.52986 | opp_overlap 560256 ATTCTACCAAAAAAA GGGCAGGA AAT CCCTGCCC TTCTTTAGTGTTTCT Tpet_0563 561377 - 560301 - | iron-containing alcohol dehydrogenase TERM 611 561208 - 561224 + g 86 -4.4 -5.626 | overlap 561202 CCTATCACGGCTTGA GCGTTT ATTTC AAGCGC TTTTTTTGTAGCCTC Tpet_0564 562796 - 561591 - | threonine dehydratase TERM 612 562017 - 562007 - G 74 -5.4 -4.56133 | opp_overlap 562010 GCTCAAGAAGGAAAA GGAT GGC ATCC GCTATTTCTTCTTCG TERM 613 562888 - 562902 + H 74 -4.2 -5.00616 | overlap 562887 TTTCTCATTTTGCTT GTGAGA AAT TCACAC TTTTTTCACAAAGAA TERM 614 563780 - 563758 - g 76 -4 -4.9138 | overlap 563759 AGTACTGAAAGAAAA GGTTGACCTC AAC GAGAACATCC TCAAAGATTACCAGG Tpet_0565 562964 - 563950 + | Outer membrane protein-like protein TERM 615 564590 - 564578 - g 73 -4.1 -4.73614 | opp_overlap 564580, overlap 564580 GACGACGAAAAGAAA GCTCT GGA AAAGC AGATACTCTCCACTG TERM 616 564698 - 564684 - g 70 -5 -4.47328 | AAGTGTATCAGAAAA CAAGAA AGT TTCTCG AGGGGGTCACTCTGC Tpet_0566 563966 - 565264 + | Outer membrane protein-like protein TERM 617 566157 - 566173 + G 70 -5.1 -4.51174 | overlap 566158 AGAAATCAAAAAGGG TGTTTCC GAA GGAGACG TTTTGCTTCTCATCC Tpet_0567 565261 - 566268 + | RND family efflux transporter MFP subunit Tpet_0568 566265 - 566969 + | ABC transporter related Tpet_0569 566956 - 568170 + | hypothetical protein TERM 618 568228 - 568198 - f 77 -3.3 -5.19879 | gap 1, opp_overlap 568206, overlap 568204 568205 GCGGAAACACAAAAA CAAACATTTGCCCC GAAA GGGGC-ATTTTTTG TTTTGTATCAGATTT TERM 619 568206 - 568221 + F 100 -10.4 -5.8901 | opp_overlap 568205 568204 568198 ACAAAAACAAACATT TGCCCC GAAA GGGGCA TTTTTTGTTTTGTAT Tpet_0570 569357 - 569959 + | lysine exporter protein LysE/YggA Tpet_0571 570386 - 569952 - | 3-dehydroquinate dehydratase Tpet_0572 571861 - 570383 - | shikimate kinase., 3-dehydroquinate synthase Tpet_0573 572939 - 571809 - | chorismate synthase TERM 620 572346 - 572360 + gr 70 -7.1 -3.93256 | overlap 572336 572342 CTTCACCTTGCCGCC GAGGG TGTTT CCCTC TTCTTTCGCCCTGTC TERM 621 572690 - 572702 + gr 70 -4.7 -4.41348 | overlap 572691 TTCGAACGTCTTTCA CCGGG TTG CCCGC TTTGTTTGGAACGAG Tpet_0574 573697 - 572936 - | shikimate dehydrogenase substrate binding subunit Tpet_0575 574959 - 573694 - | 3-phosphoshikimate 1-carboxyvinyltransferase Tpet_0576 575717 - 574956 - | prephenate dehydrogenase Tpet_0577 576730 - 575714 - | 3-deoxy-7-phosphoheptulonate synthase TERM 622 576770 - 576790 + r 100 -14 -3.31575 | opp_overlap 576770, overlap 576765 576763 TTGGTAATAAAAAAA GGGCTCCG CTGCC CGGAGCCC TTCAGTGTTTTCTAT TERM 623 576790 - 576770 - R 100 -14 -5.7946 | opp_overlap 576770 576765 576763 TTGGTAATAAAAAAA GGGCTCCG CTGCC CGGAGCCC TTCAGTGTTTTCTAT TERM 624 576827 - 576869 + r 89 -14.1 -3.01791 | gap 1, opp_overlap 576827 GGGCAGATACCGAAA GAGGCACCTGCCCG-GAGCG GTCG CACTCACGGACAGGTGCCCC TGTTAAACCAAAAGT TERM 625 576869 - 576827 - R 100 -20.7 -3.74077 | gap 1, opp_overlap 576827 GGGCAGATACCGAAA GAGGCACCTGCCCG-GAGCG GTCG CACTCACGGACAGGTGCCCC TGTTAAACCAAAAGT Tpet_0578 578228 - 576987 - | major facilitator transporter TERM 626 577122 - 577134 + g 76 -9.1 -3.72893 | opp_overlap 577112 GAGAACCGATCCGAG CGGAG TGA CTCCG TTTGCTACGAGAATG Tpet_0579 578924 - 578424 - | hypothetical protein TERM 627 578541 - 578551 + g 74 -6.8 -4.25566 | CGCGATATCACCTTC CACC ACC GGTG TTTTCCCTGATTCTT Tpet_0580 579300 - 578917 - | hypothetical protein TERM 628 579498 - 579484 - g 73 -4.3 -4.84527 | CTTACACATGAAAAA TGAGA GTAAT TCTCA AAAAGGAGGTGAGGA Tpet_0581 579483 - 579590 + | hypothetical protein TERM 629 579625 - 579639 + F 100 -11.4 -6.09196 | opp_overlap 579624 CTGTTTTTTAACCAG GCCTCG AAA CGAGGC TTTTTTTGTTTTAAA TERM 630 579870 - 579858 - g 79 -4.1 -5.1523 | TGGAGAACAGAAAAA GACAT CAC ACGTC TTGGAAGGCCTCGTC Tpet_0582 579672 - 581375 + | radical SAM domain-containing protein TERM 631 582543 - 582530 - g 70 -5.3 -4.51174 | TCAGGAGAAGGAAAA TCAAC GCCG GTTGA ATACATGAAGAAAGG Tpet_0583 581372 - 582610 + | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein TERM 632 582807 - 582790 - gf 100 -12.7 -3.79113 | opp_overlap 582790 AGCTCCTTAGAAGAA GCCTCCC TTGT GGGAGGC TTTTTTAAAGTGGTG TERM 633 582790 - 582807 + GF 100 -12.7 -5.06451 | opp_overlap 582790 AGCTCCTTAGAAGAA GCCTCCC TTGT GGGAGGC TTTTTTAAAGTGGTG pyrC 582637 - 583767 + | dihydroorotase Tpet_0585 583730 - 584383 + | 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase-like protein Tpet_0586 584371 - 585183 + | dihydroorotate dehydrogenase family protein Tpet_0587 585180 - 585785 + | orotidine 5'-phosphate decarboxylase pyrE 585782 - 586345 + | orotate phosphoribosyltransferase TERM 634 586959 - 586945 - gf 72 -6.4 -4.26079 | overlap 586946 CCAAAGGATCTAAAA CCCGAA CAC TTCGGA GATCTCAACAAGAGA Tpet_0589 586342 - 587646 + | amidohydrolase 3 TERM 635 587675 - 587631 - g 72 -3 -4.9218 | gap 1, overlap 587632 587633 587635 GATTTATGAGAAAAA CGGATCCTCTCATTGATATTT TCAA AAAGAACAAAGAGAGAATC-G ATATCCTTGGAAAAG TERM 636 587675 - 587701 + G 70 -2.4 -5.07652 | gap 1 AACAAAGAGAGAATC GATATCCT-TG GAAAAG CATGGGATATC TTTTATTTTGAAGGA Tpet_0590 587621 - 588295 + | hypothetical protein Tpet_0591 589212 - 588286 - | DNA methylase N-4/N-6 domain-containing protein TERM 637 588406 - 588386 - G 72 -4.7 -4.65916 | TCTATTCCAACAAAA TGCCGTC CTGTTTT AACGGCA GCCACACAAGTTGTT Tpet_0592 590345 - 589362 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Tpet_0593 591205 - 590363 - | RpiR family transcriptional regulator Tpet_0594 591973 - 591218 - | short-chain dehydrogenase/reductase SDR Tpet_0595 593272 - 591989 - | TRAP dicarboxylate transporter, DctM subunit Tpet_0596 593753 - 593274 - | tripartite ATP-independent periplasmic transporter DctQ TERM 638 593806 - 593784 - R 100 -14.1 -3.76775 | opp_overlap 593783 593782 CTGAACAGAGTGAAA GCCCGACCC AGAAA GGGCCGGGC AATTGATGATTACTC Tpet_0597 594826 - 593816 - | TRAP dicarboxylate transporter, DctP subunit TERM 639 595496 - 595460 - g 76 -5.1 -4.78752 | opp_overlap 595489, overlap 595462 ATTACAACGGAAAAA TACTGGCCCTCAC ACCCGCTCACA GTGAGGGCCTGAA GGATCAGGTCTTTAG TERM 640 595494 - 595462 - g 71 -7.7 -4.00465 | opp_overlap 595489, overlap 595460 TACAACGGAAAAATA CTGGCCCTCAC ACCCGCTCACA GTGAGGGCCTG AAGGATCAGGTCTTT Tpet_0598 594979 - 595563 + | hypothetical protein Tpet_0599 595751 - 595548 - | heavy metal transport/detoxification protein Tpet_0600 597941 - 595779 - | heavy metal translocating P-type ATPase TERM 641 595909 - 595922 + gr 73 -5.3 -4.67635 | TTGTAGAAGAAGGCC CAGAA CAGG TTCTG TTTTATGATTTTGAA Tpet_0601 598242 - 597916 - | alkylhydroperoxidase Tpet_0602 598483 - 598235 - | membrane protein-like protein Tpet_0603 598578 - 598757 + | YHS domain-containing protein TERM 642 598760 - 598785 + T 85 -11.9 -3.35639 | opp_overlap 598765, overlap 598765 ATGCTGTCATTGATC AAAAAGGCGCC GTCC GGCGCCTTTTA TTCATTCAGGATCTT TERM 643 598765 - 598780 + T 100 -11.8 -4.78572 | opp_overlap 598765, overlap 598760 GTCATTGATCAAAAA GGCGCC GTCC GGCGCC TTTTATTCATTCAGG TERM 644 598780 - 598765 - T 100 -11.8 -4.7497 | opp_overlap 598760 598765 GTCATTGATCAAAAA GGCGCC GTCC GGCGCC TTTTATTCATTCAGG Tpet_0604 599742 - 598783 - | aldo/keto reductase Tpet_0605 600733 - 599756 - | oxidoreductase domain-containing protein TERM 645 599951 - 599967 + g 74 -8.1 -3.87062 | TTCTCCGTTCAGGAC TATTCTG TCC CAGAATA TTTCCATTCTTCCTT TERM 646 600414 - 600439 + g 84 -8.3 -4.58395 | TCGACAACTTTCTTT CCCGTTTCTAC GTCC GTTGAAATGGG TTTTTCACAGATCAC Tpet_0606 601281 - 600793 - | hypothetical protein TERM 647 601349 - 601334 - R 100 -11.8 -5.58179 | CACCAGAACAAAAAA GGGCGG AAAT CCGCCC TTGAACACACTACTG Tpet_0607 603395 - 601377 - | Beta-galactosidase TERM 648 601739 - 601750 + g 74 -3.6 -5.00895 | ATCTTCCGAGCACTT CCGC TGTG GTGG TTTTTATGTAGTCAA TERM 649 603415 - 603434 + r 88 -10.6 -4.20211 | opp_overlap 603416, overlap 603408 603416 GTTCACCTCCAAAAA ACCCCGGC GATC GCCGGGGC TTTCTCATTTCTGTT TERM 650 603433 - 603416 - R 100 -14.1 -5.03314 | opp_overlap 603416 603415 603408 TTCACCTCCAAAAAA CCCCGGC GATC GCCGGGG CTTTCTCATTTCTGT TERM 651 603416 - 603433 + r 89 -14.1 -3.105 | opp_overlap 603416, overlap 603415 603408 TTCACCTCCAAAAAA CCCCGGC GATC GCCGGGG CTTTCTCATTTCTGT Tpet_0608 605415 - 603439 - | extracellular solute-binding protein TERM 652 603503 - 603493 - G 72 -8.2 -3.68569 | opp_overlap 603485 CCATGGACTGAAGAA CGGC GTT GCCG TCACCAGTTCCTCCG TERM 653 604434 - 604424 - G 72 -8.2 -3.67402 | overlap 604422 604425 AGAAGCGGCAAAACA CCCG GGC CGGG TCCCAGAAGACCAAT TERM 654 605545 - 605558 + H 73 -5.3 -4.63184 | opp_overlap 605545 AATTATTCACAACTA TCGAT AAAT ATCGA TTTTTAGCGTCAATT TERM 655 606841 - 606824 - g 85 -7 -5.0133 | TATTTCCTGAAAAAA CCAGAC GGAGAT GTCTGG CAGACGGACGACTGG Tpet_0609 605735 - 608029 + | alpha-xylosidase YicI TERM 656 608053 - 608022 - T 100 -16 -3.38522 | opp_overlap 608027, overlap 608027 GAGCGATTTTAAAGA CAAAATGAGGGCGC TTCT GCGCCCTCATTTCA TAAGCACAAAATCGA TERM 657 608048 - 608027 - T 100 -15.9 -4.79451 | opp_overlap 608027, overlap 608022 ATTTTAAAGACAAAA TGAGGGCGC TTCT GCGCCCTCA TTTCATAAGCACAAA TERM 658 608027 - 608048 + T 100 -15.9 -3.72576 | opp_overlap 608027 608022 ATTTTAAAGACAAAA TGAGGGCGC TTCT GCGCCCTCA TTTCATAAGCACAAA Tpet_0610 609467 - 608046 - | L-fucose isomerase N-terminal_2 domain-containing protein TERM 659 608986 - 608999 + g 76 -2.3 -5.43414 | CCGAACACACCGTAT CTCTG ACCC CTGAG TTTTTTGTATGTGCT Tpet_0611 610804 - 609464 - | Alpha-L-fucosidase Tpet_0613 612994 - 611549 - | carbohydrate kinase, FGGY Tpet_0614 613964 - 613008 - | alcohol dehydrogenase TERM 660 613585 - 613605 + g 77 -11.2 -3.28712 | TCTGCGGGTACATTT CTCACAGG ATAAA CCTGTGAG TTCTCCACGAGCACG Tpet_0615 614750 - 613977 - | short-chain dehydrogenase/reductase SDR TERM 661 615613 - 615597 - g 79 -7.9 -4.54727 | TCTTTCAAAGTAAAA CCTGTGG ATG CCACGGG GTGCGGAGACTCGTT Tpet_0616 614859 - 615806 + | ribokinase-like domain-containing protein Tpet_0617 615905 - 616561 + | putative translaldolase TERM 662 616587 - 616559 - T 95 -11.8 -4.21989 | opp_overlap 616565, overlap 616565 GAGAACCTGAAGAAA TAAAAAGCCCGC TTCCT GCGGGCTTTTTT CATGCAAGCCACATG TERM 663 616581 - 616565 - T 100 -10.8 -5.47159 | opp_overlap 616565, overlap 616559 CTGAAGAAATAAAAA GCCCGC TTCCT GCGGGC TTTTTTCATGCAAGC TERM 664 616565 - 616581 + T 100 -10.8 -5.14563 | opp_overlap 616565 616559 CTGAAGAAATAAAAA GCCCGC TTCCT GCGGGC TTTTTTCATGCAAGC Tpet_0618 617642 - 616587 - | gamma-glutamyl kinase TERM 665 617504 - 617490 - G 95 -12.8 -4.08221 | TCCAAGATAAGTAAA GCCCGC AGC GCGGGC CCCAGATGTGATGAT Tpet_0619 618892 - 617645 - | gamma-glutamyl phosphate reductase TERM 666 618777 - 618795 + g 78 -5.2 -4.99645 | overlap 618779 ATTTCTTTTCTCTTC TCGTCGAG TTT CTCGGCTA TTTTCTTTATCGCCT TERM 667 618779 - 618793 + g 73 -7.8 -4.11748 | overlap 618777 TTCTTTTCTCTTCTC GTCGAG TTT CTCGGC TATTTTCTTTATCGC leuD 619405 - 618905 - | 3-isopropylmalate dehydratase small subunit Tpet_0621 620675 - 619419 - | 3-isopropylmalate dehydratase large subunit Tpet_0622 621771 - 620668 - | 2-methylcitrate synthase/citrate synthase II TERM 668 620991 - 620962 - G 82 -10.9 -3.57144 | opp_overlap 620964 TTTGCTATCTGGAAA GTGTTCCTGAAGA ACTC TCTTCAAAAACAC CGCTCTCGGATCGTA TERM 669 621644 - 621654 + g 74 -5.4 -4.58283 | AAGTAGGCCGTTTCT TCGA AAG TCGA TTTTTCCGCGAGTTC TERM 670 621892 - 621903 + H 71 -4.4 -4.67038 | GCATGGCACAGGCTG GCAT TTTA ATGC TTTTCGTTTTGAAAA TERM 671 623159 - 623147 - g 78 -6.3 -4.65263 | AGGCTGGAAAAGAAA GATCT CGA AGATC CCGAAACTCTCGAAA Tpet_0623 621989 - 623248 + | 6-phosphofructokinase TERM 672 623281 - 623253 - T 70 -10.3 -2.53125 | opp_overlap 623257, overlap 623252 623251 AGCTTCCATAAAACT TTTATGAGCCCCA TCT TGGGGCTCATTAT CTTTCTACAACGAGA TERM 673 623257 - 623277 + T 100 -15.5 -3.89695 | opp_overlap 623253 623252 623251 TCCATAAAACTTTTA TGAGCCCCA TCT TGGGGCTCA TTATCTTTCTACAAC Tpet_0624 625071 - 623278 - | ABC transporter, transmembrane region Tpet_0625 626797 - 625064 - | ABC transporter related TERM 674 626521 - 626505 - G 82 -5.9 -5.19879 | overlap 626499 626506 TTGGAAATAGAAAAA CTCAGAA CTT TTCTGAA GAGATCTCGCCTCAA Tpet_0626 627246 - 626794 - | PadR-like family transcriptional regulator TERM 675 626986 - 626956 - G 70 -4.7 -4.45577 | opp_overlap 626947 626974, overlap 626947 ACAAATTTCAGAAAA GACTCTGAATCTC TCTGC GAAATCCAGTGCC TTCTTGATTTCCTCT Tpet_0627 628525 - 627314 - | glycerol-1-phosphate dehydrogenase (NAD(P)(+)) TERM 676 628272 - 628288 + g 70 -9.5 -3.05298 | opp_overlap 628270, overlap 628270 CCAATCGATACGATC TCTGGAA AAT TTCCAGA TGCTTTCATTACTTT TERM 677 628392 - 628348 - G 87 -10.8 -4.07568 | gap 1, opp_overlap 628355, overlap 628349 628355 TTCTCTCGTTGAAAA CGAAGGACCGCTTCCCGGGTA GATT CACCAGGGAAGCGGTG-TTCA GGTCTGCTATGAAAA TERM 678 628391 - 628349 - G 78 -12.1 -3.04398 | gap 1, opp_overlap 628355, overlap 628348 628355 TCTCTCGTTGAAAAC GAAGGACCGCTTCCCGGGTA GATT CACCAGGGAAGCGGTG-TTC AGGTCTGCTATGAAA TERM 679 628355 - 628386 + g 93 -15.9 -3.08438 | opp_overlap 628349 628348 628355 GTTGAAAACGAAGGA CCGCTTCCCGGGT AGATTC ACCAGGGAAGCGG TGTTCAGGTCTGCTA TERM 680 628386 - 628355 - G 100 -16.6 -2.94333 | opp_overlap 628355, overlap 628349 628348 GTTGAAAACGAAGGA CCGCTTCCCGGGTA GATT CACCAGGGAAGCGG TGTTCAGGTCTGCTA Tpet_0628 630049 - 628529 - | carbohydrate kinase, FGGY TERM 681 629954 - 629980 + g 79 -9.5 -3.78015 | TGGAGTTATGACTTC GTACTCTCTGA AAGCC TCAGCGAGTAC TTCTCCTTTTTCGTT Tpet_0629 630700 - 630062 - | L-ribulose-5-phosphate 4-epimerase Tpet_0630 631847 - 630777 - | aldose 1-epimerase TERM 682 631705 - 631682 - G 100 -16.8 -4.11081 | opp_overlap 631679 631678 AAACAACATCAGAAA GGGTGCCAGA ACTG TCTGGCACCC ACAATTCTCTCACTA Tpet_0631 633330 - 631876 - | Alpha-N-arabinofuranosidase Tpet_0632 635774 - 633345 - | hypothetical protein Tpet_0633 637720 - 635786 - | Alpha-N-arabinofuranosidase TERM 683 636316 - 636306 - G 80 -6.8 -4.63486 | ACTCCTGTAAGAAAA GCTG CTT CAGC GAGTGCTGCCTGCCA Tpet_0634 638561 - 637707 - | binding-protein-dependent transport systems inner membrane component Tpet_0635 639507 - 638563 - | binding-protein-dependent transport systems inner membrane component TERM 684 639284 - 639268 - G 73 -9.5 -3.3164 | opp_overlap 639268 AACGGATTGCCAGAA TCTGGAA TCG TTCCAGA TTCTCACGTAGTTAT TERM 685 639268 - 639284 + g 73 -9.5 -3.35283 | opp_overlap 639268 AACGGATTGCCAGAA TCTGGAA TCG TTCCAGA TTCTCACGTAGTTAT Tpet_0636 640776 - 639529 - | extracellular solute-binding protein TERM 686 640064 - 640074 + g 72 -5.4 -4.44355 | TCGATAGGTTGATCA GGAT ACA ATCC TTCTTTTTGAAGTTC TERM 687 640861 - 640871 + H 76 -4 -5.04987 | opp_overlap 640861 TTCCATCTCAAACAA TTCA AGG TGAA TTTTTTGGAAATATT Tpet_0637 641028 - 642443 + | glycoside hydrolase family protein Tpet_0638 642474 - 643226 + | hypothetical protein Tpet_0639 643236 - 644663 + | glycoside hydrolase family protein Tpet_0640 644680 - 645432 + | hypothetical protein Tpet_0641 645448 - 646224 + | hypothetical protein Tpet_0642 646230 - 646973 + | LamG domain-containing protein TERM 688 646969 - 646999 + T 87 -13.5 -3.08812 | gap 1, opp_overlap 646969 646976, overlap 646976 AACTTTTCCAGAAAA GATAAAAGAGCCCC TGCT GGGGCTCTTTT-TC ATTTCTTCAACCACA TERM 689 646999 - 646969 - T 100 -13.5 -4.37658 | gap 1, opp_overlap 646969 646976, overlap 646976 AACTTTTCCAGAAAA GATAAAAGAGCCCC TGCT GGGGCTCTTTT-TC ATTTCTTCAACCACA TERM 690 646976 - 646993 + T 100 -12.7 -5.09521 | opp_overlap 646969 646976, overlap 646969 CCAGAAAAGATAAAA GAGCCCC TGCT GGGGCTC TTTTTCATTTCTTCA TERM 691 646993 - 646976 - T 100 -12.7 -4.94487 | opp_overlap 646976 646969, overlap 646969 CCAGAAAAGATAAAA GAGCCCC TGCT GGGGCTC TTTTTCATTTCTTCA Tpet_0643 648860 - 646998 - | hypothetical protein Tpet_0644 649832 - 648981 - | binding-protein-dependent transport systems inner membrane component Tpet_0645 650761 - 649832 - | binding-protein-dependent transport systems inner membrane component TERM 692 650010 - 650025 + g 77 -10.4 -3.40403 | overlap 650024 GTGTGGGTCGCGGAA CCTGGG CCAC CCCAGG TTGTCATGAAGACGA TERM 693 650724 - 650739 + g 78 -11.8 -3.08283 | opp_overlap 650724, overlap 650716 CTCTTCATATGGAAA GGGGGC GAGT GCCCCC TCTTCACCTCCTTAT TERM 694 650739 - 650724 - G 93 -11.8 -3.70902 | opp_overlap 650716 650724 CTCTTCATATGGAAA GGGGGC GAGT GCCCCC TCTTCACCTCCTTAT Tpet_0646 651731 - 650751 - | ABC-type sugar transport system periplasmic component-like protein Tpet_0647 652054 - 651728 - | hypothetical protein Tpet_0648 652247 - 653737 + | L-arabinose isomerase TERM 695 653739 - 653758 + T 100 -9.2 -5.47821 | opp_overlap 653740, overlap 653740 TTTTAAAAAGATGAA AGAGGGGC GAAG GCCCCTCA TTTTTTTGGATACGT TERM 696 653740 - 653757 + T 100 -12.7 -3.87608 | opp_overlap 653740, overlap 653739 TTTAAAAAGATGAAA GAGGGGC GAAG GCCCCTC ATTTTTTTGGATACG TERM 697 653757 - 653740 - T 100 -12.7 -4.13748 | opp_overlap 653740 653739 TTTAAAAAGATGAAA GAGGGGC GAAG GCCCCTC ATTTTTTTGGATACG Tpet_0649 654712 - 653756 - | periplasmic binding protein/LacI transcriptional regulator TERM 698 653784 - 653794 + g 72 -5.4 -4.54727 | TACGTCACCGACTCT CTCA TGA TGAG TTTTGGTTTGAAAAC Tpet_0650 656040 - 654829 - | acetate kinase TERM 699 655680 - 655710 + g 72 -9 -3.58037 | TCGCAGGGTTGTGAA GCGGTGCAAGAGGT GAA ACCTCTTCGATCGC TTTGAGCACTTCCTC Tpet_0651 656994 - 656053 - | fructose-1,6-bisphosphate aldolase, class II TERM 700 657009 - 657044 + r 76 -5.5 -4.76802 | gap 1, opp_overlap 657018, overlap 657013 657018 TTGTCACACCTCCTT CAATGTAAAGGCCGGG ACAAG CCCGGCCTTCA-ATTA TTTCTTGTTTTTGAG TERM 701 657013 - 657041 + r 84 -8.8 -4.44151 | opp_overlap 657018, overlap 657009 657018 CACACCTCCTTCAAT GTAAAGGCCGGG ACAAG CCCGGCCTTCAA TTATTTCTTGTTTTT TERM 702 657018 - 657036 + r 95 -13.1 -3.37303 | opp_overlap 657018, overlap 657013 657009 CTCCTTCAATGTAAA GGCCGGG ACAAG CCCGGCC TTCAATTATTTCTTG TERM 703 657036 - 657018 - R 100 -13.1 -3.75153 | opp_overlap 657018 657013 657009 CTCCTTCAATGTAAA GGCCGGG ACAAG CCCGGCC TTCAATTATTTCTTG Tpet_0652 659687 - 657042 - | pyruvate phosphate dikinase TERM 704 657378 - 657392 + g 72 -8.6 -3.67558 | opp_overlap 657378 GTCGTTGGTACCGAA GCTGAA GAA TTCAGC TTCTTCCGCTATCTG TERM 705 659166 - 659183 + g 78 -4.9 -4.99435 | gap 1 TTCTGCATCCAGTTC GGTGTCGA GCT TC-ACACC TTTTTCCTTCTTGAG Tpet_0653 660994 - 659762 - | hypothetical protein Tpet_0654 661059 - 661904 + | methylenetetrahydrofolate reductase Tpet_0655 661891 - 662499 + | vitamin B12 dependent methionine synthase, activation region TERM 706 662621 - 662606 - g 78 -6.1 -4.67608 | GAGCTGAATATAAAA GCACC CGACGT GGTGC TGAAGGTTCATAGAA Tpet_0656 662483 - 664789 + | homocysteine S-methyltransferase TERM 707 665739 - 665728 - g 79 -4.4 -5.1383 | AAGAAGACAGAAAAA TCCT CGAA AGGA TAAAGAACAAACGCT trmE 664794 - 666146 + | tRNA modification GTPase TrmE TERM 708 666177 - 666144 - T 81 -9.8 -4.07568 | gap 2, opp_overlap 666138 666138 666149, overlap 666151 TTCTGCGTTGGAAAA TGAATAAGGGGAAGGG GTTC CCCTTCCCCT-A-TCA CTTGACCTTCTCTTT TERM 709 666149 - 666174 + T 84 -13.3 -2.55551 | opp_overlap 666144 666151, overlap 666138 666138 CGTTGGAAAATGAAT AAGGGGAAGGG GTTC CCCTTCCCCTA TCACTTGACCTTCTC TERM 710 666172 - 666151 - T 100 -15.9 -3.965 | opp_overlap 666149 666138 666138, overlap 666144 TTGGAAAATGAATAA GGGGAAGGG GTTC CCCTTCCCC TATCACTTGACCTTC Tpet_0658 666447 - 666175 - | histone family protein DNA-binding protein Tpet_0659 668301 - 666628 - | excinuclease ABC, C subunit Tpet_0660 668980 - 668261 - | pseudouridine synthase Tpet_0661 670857 - 668977 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Tpet_0662 671968 - 670868 - | DNA polymerase III, beta subunit Tpet_0663 673190 - 671982 - | phosphate transporter Tpet_0664 673871 - 673203 - | hypothetical protein TERM 711 673444 - 673432 - G 76 -4.8 -4.7416 | opp_overlap 673435 673436 673437, overlap 673433 673434 TCAAAAGGTGAAAAA TCGC TCTCC GCGA GTACGCGGAGCTGTT TERM 712 673437 - 673454 + g 78 -12.7 -2.50398 | opp_overlap 673432 673433 673434, overlap 673436 673435 673450 AGGTGAAAAATCGCT CTCCGCG AGTA CGCGGAG CTGTTCGATTACTTC Tpet_0665 674779 - 673868 - | D-alanine--D-alanine ligase Tpet_0666 676595 - 674694 - | DNA topoisomerase I Tpet_0667 677598 - 676588 - | metal dependent phosphohydrolase Tpet_0668 677977 - 677585 - | hypothetical protein TERM 713 677759 - 677771 + g 88 -3.4 -5.64274 | AAAAGATTTCCTCTC CAGA ACCAC TCTG TTTTTTTCTACATCG TERM 714 677916 - 677896 - G 82 -6.9 -4.90477 | TATAAAAAAGGAAAA TTGTGAGGT CAA AGCTCACAA CCCATAGCAGAATCA TERM 715 678002 - 677984 - R 74 -8 -4.10188 | overlap 677985 TACAGCCATAAATAA TGCGGGCC AAC AGCCCGCT CACACCTCCGAAACT TERM 716 678001 - 677985 - R 79 -11.5 -3.0539 | overlap 677984 ACAGCCATAAATAAT GCGGGCC AAC AGCCCGC TCACACCTCCGAAAC Tpet_0669 678262 - 678002 - | ribosomal protein L28 smpB 678717 - 678265 - | SsrA-binding protein Tpet_0671 679045 - 678719 - | hypothetical protein Tpet_0672 679332 - 679042 - | glutamyl-tRNA(Gln) amidotransferase, C subunit Tpet_0673 679546 - 679295 - | carbon storage regulator, CsrA TERM 717 679397 - 679422 + gr 71 -9.9 -3.06969 | gap 1 GTTCTCACTCTTGAG TTCTTCGTAGAG TTC CTC-ACGAAGAA TCTTCACATGCCTTG Tpet_0674 680564 - 679551 - | DNA protecting protein DprA TERM 718 679694 - 679704 + g 74 -5.4 -4.56153 | opp_overlap 679694 GCGAACTTCTCAACA GATC GTA GATC TTCTTTTTGTCATCA Tpet_0675 680853 - 680551 - | Fe-S cluster domain-containing protein Tpet_0676 681433 - 680858 - | electron transport complex, RnfABCDGE type, A subunit TERM 719 681184 - 681170 - G 84 -8.6 -4.56597 | GGTTTTCTTCAAAAA CAGTTC GAC GAACTG GACGAAAGAAGCGAT Tpet_0677 682032 - 681430 - | SoxR-reducing system protein RsxE TERM 720 681617 - 681585 - G 70 -9.9 -3.08996 | TACCGTTACCGAAGA GTTCTCTGATGCTTC CAA GAAGAACCAGTGAAC CTGTGAAACCGAGAC Tpet_0678 682703 - 682029 - | electron transport complex, RnfABCDGE type, G subunit Tpet_0679 683656 - 682700 - | electron transport complex, RnfABCDGE type, D subunit Tpet_0680 684960 - 683653 - | electron transport complex, RnfABCDGE type, C subunit Tpet_0681 685816 - 684965 - | radical SAM domain-containing protein Tpet_0682 686037 - 685813 - | hypothetical protein Tpet_0683 687107 - 686082 - | hypothetical protein glgC 688382 - 687111 - | glucose-1-phosphate adenylyltransferase TERM 721 687756 - 687776 + g 71 -6.9 -4.1673 | overlap 687761 AGAACTGTTCGGATC GTTTTCGTC TTC GATGAGAAC TTTCTTCAGGAATTC Tpet_0685 689533 - 688394 - | glucose-1-phosphate adenylyltransferase, GlgD subunit Tpet_0686 690088 - 689546 - | hypothetical protein TERM 722 690674 - 690687 + G 72 -6.7 -4.30719 | AGGTGGAGGAAAGTT CTTCG CCCT CGAAG TTTCTTCTCACGCAC Tpet_0687 690156 - 691628 + | UDP-N-acetylmuramyl-tripeptide synthetase TERM 723 691964 - 691950 - g 77 -7.2 -4.54297 | TCAAGAACAAAAGAA GTGTTT TCA AAACAC CGGGAAACATGAACA Tpet_0688 691625 - 692905 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Tpet_0689 692902 - 693810 + | phospho-N-acetylmuramoyl-pentapeptide-transferase Tpet_0690 693807 - 695099 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 724 695240 - 695253 + G 83 -4.5 -5.3671 | CATTTGATGAAGCTC GCGGT GGCC ATCGC TTTTTTCGTTGTCTT Tpet_0691 695096 - 696190 + | cell cycle protein TERM 725 697097 - 697083 - g 74 -5.6 -4.57353 | CGTTATCAGAGAAAA CGAGGC GTC ACCCCG AAAAATAATCGAGTC Tpet_0692 696187 - 697206 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 726 697613 - 697589 - g 72 -5 -4.6856 | gap 1, opp_overlap 697591, overlap 697591 GAAACATTTGAAAAA GTCTCCAACGG TGTT CC-TTGGAGGC ATAATGGATTCCCTC Tpet_0693 697203 - 698576 + | UDP-N-acetylmuramate--alanine ligase Tpet_0694 699004 - 698528 - | phosphodiesterase Tpet_0695 699867 - 699010 - | auxin efflux carrier TERM 727 699896 - 699932 + r 79 -8 -4.37092 | opp_overlap 699889 699903, overlap 699903 GAGAGGAATTCTACC AGAAAAAGAGGGCGTC TCTTT GACGCCCTCTTTATGG TTTTCTAACACCAAT TERM 728 699903 - 699925 + r 100 -14.9 -4.2408 | opp_overlap 699903, overlap 699896 ATTCTACCAGAAAAA GAGGGCGTC TCTTT GACGCCCTC TTTATGGTTTTCTAA TERM 729 699925 - 699903 - R 100 -14.9 -4.91511 | opp_overlap 699903 699896 ATTCTACCAGAAAAA GAGGGCGTC TCTTT GACGCCCTC TTTATGGTTTTCTAA Tpet_0696 701564 - 699927 - | NADH dehydrogenase (quinone) TERM 730 700301 - 700275 - G 73 -10.2 -2.95774 | overlap 700295 GAGATCCACCACACA GTGAGTCTCGTC AGC AACGAGAATCAC TCCTGATCCAAGGGA Tpet_0697 702034 - 701561 - | NADH-quinone oxidoreductase, E subunit TERM 731 702121 - 702110 - R 77 -4.4 -5.08824 | GTGCCATTTAAAAAA GGTT TTTC AACC AGTCAAAAATAGGAA Tpet_0698 702776 - 702102 - | hypothetical protein Tpet_0699 703714 - 702776 - | D-cysteine desulfhydrase TERM 732 704092 - 704106 + G 72 -5 -4.59773 | GAAAGCTCGCAGGAG TTCTCT CAG AGGGAA TTTTTGAAGGTGCAA TERM 733 704354 - 704326 - g 71 -6.8 -4.12188 | opp_overlap 704325 704328, overlap 704330 704346 704347 704349 CGAGGATCTGGAAAA GATACCTTCTTC AGAAA GAAGGAGATATC ATATCTCTGGAAGGA Tpet_0700 703767 - 704462 + | biotin--acetyl-CoA-carboxylase ligase Tpet_0701 704664 - 704431 - | RNA-binding S4 domain-containing protein TERM 734 704487 - 704501 + g 73 -4.2 -4.80178 | AGCCTCCGTTTCCCA CAACCC TTA GGGTTA TTTTCTTGGTTGGTA Tpet_0702 705461 - 704661 - | ABC transporter related TERM 735 704704 - 704719 + g 73 -7.6 -4.07687 | TCATCGTCGCTCATT GAGAAG GGGT CTTCTC TTTTCAAAACCAACT TERM 736 705604 - 705589 - g 73 -7.6 -4.13995 | TCTCGAGAAAGGAAA TTCCTC GTGG GAGGAA TAGGGATTGCCCTTG TERM 737 706091 - 706072 - g 71 -10 -3.29461 | GAACCCGGTGCAGAA CTCACCCG CGAA CAGGTGAG AGGAATCGTTGAGCT TERM 738 706293 - 706272 - g 71 -3.7 -4.82998 | opp_overlap 706277, overlap 706277 CGAAAGCAAAATAAA GAAAGCACT GGAA AGTGTCTTC GGCCCTGGAAGGGTG Tpet_0703 705511 - 707109 + | flagellar M-ring protein FliF fliG 707114 - 708121 + | flagellar motor switch protein G TERM 739 708280 - 708259 - g 76 -2.3 -5.43487 | gap 1, overlap 708248 708247 708260 AAATGAGAGAAAAAA TCCTCTCCGA AGC TCAG-GAAGA GGCCAGAAAAATCAT TERM 740 708658 - 708639 - g 85 -3.6 -5.52909 | gap 1 GAAGATGCAAAAAAA CTGGACCTC AGT GAAGTC-AG CAAAGAAACTTTGAT Tpet_0705 708123 - 708833 + | flagellar biosynthesis/type III secretory pathway protein-like protein TERM 741 709232 - 709207 - g 70 -2.5 -4.93661 | overlap 709210 AGACGAAGAATAAAA GATCCTCTACC AGTG GGCATACGATC GATAGATGGCCTCAT TERM 742 709907 - 709886 - g 77 -11.5 -3.27902 | opp_overlap 709894, overlap 709882 709887 TCACTGAAGAACACA GGGAGGCGG CGAA CCGCCTCCG ATCGCTGATGTCGGC TERM 743 709906 - 709887 - g 90 -15 -2.56259 | opp_overlap 709894, overlap 709886 709882 CACTGAAGAACACAG GGAGGCGG CGAA CCGCCTCC GATCGCTGATGTCGG Tpet_0706 708826 - 710109 + | flagellar protein export ATPase FliI Tpet_0707 712104 - 710086 - | glycine--tRNA ligase TERM 744 711445 - 711456 + g 89 -4.4 -5.71712 | opp_overlap 711437 711434 AAATTCATCGATCTG TTCG AGGA CGAA TTTTTTTCTCTCCAG glyQ 712945 - 712085 - | glycyl-tRNA synthetase subunit alpha Tpet_0709 713335 - 712949 - | putative endoribonuclease L-PSP Tpet_0710 714761 - 713337 - | glycine dehydrogenase subunit 2 Tpet_0711 716071 - 714758 - | glycine dehydrogenase subunit 1 Tpet_0712 716468 - 716100 - | glycine cleavage system protein H Tpet_0713 717565 - 716471 - | glycine cleavage system aminomethyltransferase T TERM 745 717394 - 717378 - G 73 -4.3 -4.76213 | opp_overlap 717381 AGAAAGTCAATAAAA GAAACCG CCT CGGGTCC CTTAACGAGAAATTC Tpet_0714 717771 - 717562 - | hypothetical protein TERM 746 717824 - 717863 + H 70 -6.6 -4.10657 | gap 1, opp_overlap 717824, overlap 717833 TAATATCACAGAGAA GTGGTAAATTG-ACATAGG GAA CCCATGTACATTTTATCAC TTTTGACGCATATGC TERM 747 718671 - 718654 - g 79 -9.9 -3.75665 | GGATAGGCTACGAAA CGAGGAT TACC ATCCTCG GACACGTACAGAGAG Tpet_0715 717927 - 718886 + | 6-phosphofructokinase Tpet_0716 718900 - 720300 + | pyruvate kinase Tpet_0717 720313 - 720939 + | Zn-dependent hydrolase of the beta-lactamase fold-like protein Tpet_0718 720939 - 721451 + | hypoxanthine phosphoribosyltransferase TERM 748 721646 - 721627 - g 83 -13.6 -2.61106 | opp_overlap 721624 721620, overlap 721623 721624 CACACGGAGAATTTA CCAGCTCC TTCA GGAGCTGG ATGATCCTTTACTGG TERM 749 722903 - 722891 - g 77 -3.3 -5.22137 | overlap 722892 AAGGAGAAAATAAAA TCCGG CCT CAGGA ACGGTCAAATAGACG Tpet_0719 721502 - 723841 + | ATP-dependent DNA helicase RecG Tpet_0720 724517 - 723825 - | ABC transporter related Tpet_0721 725233 - 724502 - | binding-protein-dependent transport systems inner membrane component Tpet_0722 726132 - 725230 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein TERM 750 725860 - 725877 + g 80 -7 -4.56607 | ATAGAACACCTTCCA CTCGTG TACACC CACGAG TTTTATCCTTACTCC TERM 751 726154 - 726175 + r 91 -10.1 -4.64861 | opp_overlap 726156, overlap 726156 ACCTCCTGAAAAAGA AAGGGAGGG TTTC CCCTCCCTG TTTATTTTACCGCAA TERM 752 726173 - 726156 - R 100 -12.7 -4.85782 | opp_overlap 726154 726156 CTCCTGAAAAAGAAA GGGAGGG TTTC CCCTCCC TGTTTATTTTACCGC TERM 753 726156 - 726173 + r 100 -12.7 -3.93868 | opp_overlap 726156, overlap 726154 CTCCTGAAAAAGAAA GGGAGGG TTTC CCCTCCC TGTTTATTTTACCGC Tpet_0723 727925 - 726177 - | hydrogenase, Fe-only Tpet_0724 729081 - 728023 - | DNA integrity scanning protein DisA Tpet_0725 730384 - 729059 - | DNA repair protein RadA TERM 754 729107 - 729139 + g 74 -3.4 -4.93316 | opp_overlap 729102 729106, overlap 729111 729130 CCCAATTATAGAGAC GGCCTCTTTGAGGT CACGC ACCTCAAAAACTCC TTTTTGCTCTTCTTC TERM 755 730271 - 730250 - G 100 -15.9 -4.81249 | opp_overlap 730250 TTCTAAATTTAAAAA CAGGGAGGG GCTT CCCTCCCTG TTTTTCCTTCTTTGA TERM 756 730250 - 730271 + g 100 -15.9 -5.04356 | opp_overlap 730250 TTCTAAATTTAAAAA CAGGGAGGG GCTT CCCTCCCTG TTTTTCCTTCTTTGA Tpet_0726 732843 - 730381 - | ATPase TERM 757 733781 - 733768 - g 70 -2.3 -4.9725 | ACTCGTATACAAAAA GATCC TGCG GGAAC TCGAAGAAGAACAAC Tpet_0727 733058 - 733972 + | PP-loop domain-containing protein TERM 758 733983 - 733957 - T 93 -2.9 -5.8901 | gap 1, opp_overlap 733959 733960 733961 733962, overlap 733960 733961 733962 AGAGAAAAGAAAAAA CAAGGCCCCCGC ATGA GCGGGGGA-TCA TTTTTTGTACTTTGT TERM 759 733959 - 733983 + T 87 -5.6 -5.43621 | gap 1, opp_overlap 733957 733960 733961 733962, overlap 733960 733961 733962 AGAAAAGAAAAAACA AGG-CCCCCGC ATGA GCGGGGGATCA TTTTTTGTACTTTGT TERM 760 733960 - 733982 + T 77 -9.1 -3.83732 | gap 1, opp_overlap 733957 733960 733961 733962, overlap 733959 733961 733962 GAAAAGAAAAAACAA GG-CCCCCGC ATGA GCGGGGGATC ATTTTTTGTACTTTG TERM 761 733981 - 733960 - T 84 -7.1 -4.94109 | opp_overlap 733960 733959 733961 733962, overlap 733957 733961 733962 GAAAAGAAAAAACAA GGCCCCCGC ATGA GCGGGGGAT CATTTTTTGTACTTT TERM 762 733961 - 733980 + T 81 -10.6 -3.47311 | opp_overlap 733960 733957 733961 733962, overlap 733960 733959 733962 AAAAGAAAAAACAAG GCCCCCGC ATGA GCGGGGGA TCATTTTTTGTACTT TERM 763 733980 - 733961 - T 81 -10.6 -3.52805 | opp_overlap 733961 733960 733959 733962, overlap 733960 733957 733962 AAAAGAAAAAACAAG GCCCCCGC ATGA GCGGGGGA TCATTTTTTGTACTT TERM 764 733962 - 733979 + T 87 -14.1 -2.6676 | opp_overlap 733961 733960 733957 733962, overlap 733961 733960 733959 AAAGAAAAAACAAGG CCCCCGC ATGA GCGGGGG ATCATTTTTTGTACT TERM 765 733979 - 733962 - T 87 -14.1 -2.68023 | opp_overlap 733962 733961 733960 733959, overlap 733961 733960 733957 AAAGAAAAAACAAGG CCCCCGC ATGA GCGGGGG ATCATTTTTTGTACT Tpet_0728 734472 - 733981 - | hypothetical protein Tpet_0729 734516 - 735382 + | Ppx/GppA phosphatase TERM 766 735946 - 735932 - g 73 -4.2 -4.88736 | GATGATCCAGAAAAA TTCTCC GGA GGCGAA AAACAGCGACTCGCT Tpet_0730 735551 - 736171 + | ABC transporter related Tpet_0731 736171 - 736959 + | hypothetical protein TERM 767 737198 - 737211 + F 74 -2.3 -5.1861 | TGCAGGTTCGAGTCC TGCCG GGCG CGCCA TTTTTTCGTGGTGAC Tpet_0732 737450 - 737713 + | stage V sporulation protein S TERM 768 737766 - 737730 - T 70 -3 -4.91109 | gap 1, opp_overlap 737739, overlap 737739 CTCTGACGAGAAAAA CGAACGAAA-TCCCCGC AAGT GCGGGGATTTTTGTTTT GTTAGTCAGTGTTTT TERM 769 737739 - 737756 + T 100 -12.7 -5.62288 | opp_overlap 737730 737739 GAAAAACGAACGAAA TCCCCGC AAGT GCGGGGA TTTTTGTTTTGTTAG TERM 770 737756 - 737739 - T 100 -12.7 -4.10085 | opp_overlap 737739, overlap 737730 GAAAAACGAACGAAA TCCCCGC AAGT GCGGGGA TTTTTGTTTTGTTAG Tpet_0733 738544 - 737768 - | ABC transporter related Tpet_0734 739584 - 738550 - | transport system permease protein Tpet_0735 740654 - 739578 - | periplasmic binding protein TERM 771 740258 - 740269 + g 77 -7.2 -4.53765 | opp_overlap 740258, overlap 740253 AACTGAGTACGACAA CGGG AATC CCCG TTTTCTCCTGTATGT Tpet_0736 741090 - 740659 - | hypothetical protein TERM 772 740829 - 740816 - G 77 -3.8 -5.1523 | opp_overlap 740816 TTCACAACAGAAAAA CCGA TGGGAT TCGG TCTGTGGGGAGAGCG TERM 773 741144 - 741119 - H 100 -5.3 -5.72207 | opp_overlap 741120 741122 741123, overlap 741122 741123 TTTAAATTAAAAAAA TAACCCCCTGC ACAC GCAGGGGCTCT TTGGTGGAGCCGATG TERM 774 741141 - 741122 - H 93 -9.2 -4.90519 | opp_overlap 741120 741122 741123, overlap 741119 741123 AAATTAAAAAAATAA CCCCCTGC ACAC GCAGGGGC TCTTTGGTGGAGCCG TERM 775 741122 - 741141 + H 73 -9.2 -3.44848 | opp_overlap 741122 741119 741123, overlap 741120 741123 AAATTAAAAAAATAA CCCCCTGC ACAC GCAGGGGC TCTTTGGTGGAGCCG TERM 776 741123 - 741140 + H 81 -12.7 -2.66695 | opp_overlap 741122 741119 741123, overlap 741122 741120 AATTAAAAAAATAAC CCCCTGC ACAC GCAGGGG CTCTTTGGTGGAGCC TERM 777 741140 - 741123 - H 93 -12.7 -3.50651 | opp_overlap 741123 741122 741120, overlap 741122 741119 AATTAAAAAAATAAC CCCCTGC ACAC GCAGGGG CTCTTTGGTGGAGCC TERM 778 742489 - 742469 - H 77 -4.7 -5.1634 | overlap 742470 AGAAACATAGAAAAA CTCTGCCAC GAG ATGACAGAA GAGATAGAAAGGATT TERM 779 742744 - 742734 - H 88 -4 -5.60556 | AATAGAAAAGAAAAA TGAT AAA ATCA ACTTGCGTGTTTCCG Tpet_0738 742904 - 744010 + | response regulator receiver modulated metal dependent phosphohydrolase Tpet_0739 743991 - 744386 + | activator of Hsp90 ATPase 1 family protein Tpet_0740 745655 - 744366 - | phosphoglucosamine mutase TERM 780 744623 - 744604 - G 71 -7.2 -4.07687 | ATCTCCTTCGCAAAA TCAGAAAG ATTT CTTCCTGA TCGCCTGAGAACTCT TERM 781 744914 - 744924 + g 74 -5.4 -4.71791 | CTATGATCCTATCTC CGTT CAC AACG TTTCTTTCTTCGTCT Tpet_0741 746455 - 745652 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 782 746242 - 746252 + gr 79 -3.2 -5.27938 | overlap 746233 GTCCTTCCCTTGAAA GCTT CAA GAGC TTTTTCTTTGCGACT Tpet_0742 747608 - 746415 - | radical SAM domain-containing protein Tpet_0743 748551 - 747577 - | DNA polymerase III, delta subunit TERM 783 747924 - 747938 + gH 74 -7.8 -4.08767 | opp_overlap 747914 747924 GGACAGTGGCAATCA CCACGG GCT CTGTGG TTTTCCACAACTGCG TERM 784 749094 - 749108 + G 78 -6.4 -4.72272 | ACAACGGCGAAGATG TCACTC TAT GGGTGA TTTTTGGTCAAAACG Tpet_0744 748634 - 749203 + | hypothetical protein TERM 785 749229 - 749211 - T 80 -5.9 -5.07652 | opp_overlap 749211 749207, overlap 749213 CCTGGTAAAACAAAA GTCCCTC TTTTC GAGGGGC TTCATTCTTCATCGA Tpet_0745 749509 - 749231 - | hypothetical protein TERM 786 750173 - 750189 + r 80 -7.3 -4.48221 | GGGCGGGACCAGCCT GTTATCC CCG GGGTAAC TTTTATCCGTTGATC TERM 787 750257 - 750288 + r 85 -12.2 -3.36671 | gap 1, overlap 750259 CCGGGTTTCCCCCCT GCTCGGCCTGTCGGC CTC GCAGTCAGGCCG-GC TTATGCCCTTGCACT TERM 788 750259 - 750287 + r 81 -12.3 -2.61681 | overlap 750257 GGGTTTCCCCCCTGC TCGGCCTGTCGGC CTC GCAGTCAGGCCGG CTTATGCCCTTGCAC Tpet_0746 751198 - 750701 - | homing endonuclease, LAGLIDADG/HNH TERM 789 752069 - 752091 + r 79 -9 -3.86916 | overlap 752042 752041 TACCCTTGGGCTTAC GGGGGGAGGG ATT CTCACCCTCC TTTCGTATACTCATG TERM 790 754608 - 754628 + r 75 -8.9 -3.59979 | overlap 754609 TAGTTTCGGATGCGG CCCCACGGT TGA GCCGTGGGA TTTCACATCCGACAC TERM 791 754609 - 754627 + r 82 -12.4 -2.75844 | overlap 754608 AGTTTCGGATGCGGC CCCACGGT TGA GCCGTGGG ATTTCACATCCGACA TERM 792 754761 - 754782 + r 70 -7.3 -3.9461 | CGGGGTACCGTCATC GGTAGGG CATTCCCT CCCTACC TTATTCTTCCCCCGC TERM 793 755019 - 755032 + r 79 -9.5 -3.72695 | opp_overlap 755027 755028, overlap 755029 GGCCCCTCCTCCGGC GGGGC AAAC GCCCC TTTCCTCCACCAACT TERM 794 755076 - 755091 + r 76 -10.4 -3.31144 | CGTATGGGGTATTAG CCAGGG TTTC CCCTGG TTATCCCCCTCCGGA Tpet_0747 757682 - 755472 - | primosomal protein N' TERM 795 756999 - 757014 + g 72 -3.2 -5.00616 | opp_overlap 756969, overlap 756970 757001 TCCTTTGAAATCACC GCGAAG GATC CTTCTC TTTTTTGGAAGAACG TERM 796 757372 - 757362 - G 71 -6.8 -4.02132 | overlap 757354 GTCGAAATCCAGAAA CGGA CTC TCCG AAACAACCACTTCCT Tpet_0748 758535 - 757684 - | hypothetical protein TERM 797 758387 - 758357 - G 73 -7.7 -4.14652 | gap 1 ATCAAAAAGAGCAAA CCGTTGAGTATGTA CATC CACACAC-CAACGG GGATCGGTACGAAAC TERM 798 758494 - 758522 + g 89 -6.1 -5.37043 | opp_overlap 758491 758501 GGCAGTGATCAACGT TCCAAGAGTAC TCAGCAC GTACTCTTTGA TTTTTTCTATCAACT Tpet_0749 759441 - 758560 - | hypothetical protein TERM 799 759343 - 759368 + g 90 -6.9 -5.40474 | TTCTCTGAAGATCAC CCATCTCTTTT CGGG AGAAGTGATGG TTTTTTTCAGAAGAT Tpet_0750 759703 - 759422 - | phosphopantetheine-binding TERM 800 759741 - 759726 - R 89 -11.8 -3.70068 | TATCACAATTTTAAA GGGGGC CGAA GCCCCC ATCAATCAGAACAGG hppA 761918 - 759747 - | membrane-bound proton-translocating pyrophosphatase Tpet_0752 765236 - 761922 - | reverse gyrase TERM 801 762248 - 762261 + g 100 -3.9 -6.14618 | AGAGAGGAACGGTGT GTTTT TTGT AAAAC TTTTTTTCTTTTATC TERM 802 762899 - 762930 + g 75 -9.6 -3.61971 | opp_overlap 762899 762905, overlap 762905 CACCGTTTTCCAGAA CAAGGAGAGTGAAA TCCT TTTCGCTCTTTTTG TATTCTTCTTCTCTC TERM 803 762905 - 762924 + g 87 -7.2 -5.21506 | opp_overlap 762899 762905, overlap 762899 TTTCCAGAACAAGGA GAGTGAAA TCCT TTTCGCTC TTTTTGTATTCTTCT TERM 804 763572 - 763549 - G 72 -8.2 -3.78934 | gap 1, opp_overlap 763527 TCTTTCCGAGAAGAA GCTCTTCCAAG GAA CCTGGA-GAGC GTCTCGGCTTTGGTC TERM 805 764485 - 764496 + g 82 -5.8 -5.12707 | opp_overlap 764483 764485 GAAACCACAAGAATA CCTG GCTT CAGG TTTTTTGGCCTTTCG TERM 806 765119 - 765168 + g 77 -7.2 -4.50627 | opp_overlap 765124, overlap 765124 GGGCCCCATAAATGT CAGAAGGGGAC-TCCTCGGGAAGG CAAA CCT-CACAAGGAAGTCCCCTTTCG TTTCTTTCATCGGTG TERM 807 765124 - 765163 + g 76 -7.9 -4.28115 | opp_overlap 765124, overlap 765119 CCATAAATGTCAGAA GGGGAC-TCCTCGGGAAGG CAAA CCT-CACAAGGAAGTCCCC TTTCGTTTCTTTCAT TERM 808 765163 - 765124 - G 79 -11.5 -3.41126 | gap 1, opp_overlap 765124 765119 CCATAAATGTCAGAA GGGGAC-TCCTCGGGAAG GCAAA CCTCACAAGGAAGTCCCC TTTCGTTTCTTTCAT Tpet_0753 766441 - 765227 - | S-adenosyl-L-homocysteine hydrolase TERM 809 765340 - 765357 + g 72 -4.9 -4.7329 | gap 1 TTTCATCTGGGAGCG TGTACACC TTC GGTG-ACA TTTTTCCATGATTTT Tpet_0754 766893 - 766438 - | HAD superfamily hydrolase Tpet_0755 767111 - 766890 - | hypothetical protein Tpet_0756 767739 - 767113 - | redox-sensing transcriptional repressor Rex Tpet_0757 770223 - 767749 - | leucyl-tRNA synthetase TERM 810 770043 - 770062 + g 80 -7.2 -4.62336 | TCTTGTATCTTGCGA CTATGTCA CCTA TGACGTAG TTTTTCACGTGCCCT TERM 811 770524 - 770504 - g 72 -9 -3.54424 | GTTGAGCCTGTGAAA CCCGCAGA AGGCA TCTACGGG AAAATGATGGAAAAA Tpet_0758 770315 - 771487 + | phosphopentomutase TERM 812 772113 - 772103 - g 79 -3.2 -5.28942 | overlap 772109 CAGGGGAAAGAAAAA GAGA AGC CCTC AAAGTGATGGAAGAT Tpet_0759 771478 - 772791 + | FolC bifunctional protein TERM 813 773004 - 772994 - g 85 -5.4 -5.43487 | opp_overlap 772994 773003, overlap 772982 AAATGAGAGAAAAAA GGAA CTC TTCC TTTCTCTCACAAAGG Tpet_0760 772788 - 773354 + | Holliday junction DNA helicase RuvA Tpet_0761 774092 - 773331 - | hypothetical protein TERM 814 773962 - 773945 - G 72 -6.3 -4.26344 | overlap 773947 ATATTCCCACCAAAA CACCTGT TCCC ACAGGTA TCAGCACCTTCAGAG Tpet_0762 774958 - 774122 - | TPR repeat-containing protein Tpet_0763 777252 - 774937 - | hypothetical protein TERM 815 775104 - 775123 + g 70 -2 -5.0133 | overlap 775101 775105 AAACAACCAGTATCC TGCCCTGA AAGT TCAGGACC TTTTTTGGAACAGTG TERM 816 775652 - 775638 - G 74 -5.6 -4.65895 | TGTCCCAGGCAAAAA CTCCCG ACT CGGTAG CGATGTAGACTTCCT Tpet_0764 778067 - 777249 - | polyprenyl synthetase Tpet_0765 778593 - 778048 - | hypothetical protein TERM 817 778678 - 778663 - RH 76 -5.4 -4.87626 | TTTCAATACGAAAAA GGAACC AACC AGTTCC TGTAGAATCCTATTT TERM 818 778829 - 778817 - gR 74 -3.4 -5.00616 | CCTCTCCCGAAAAAA TCGA AGTAG TCGA GGACGGTGAAACGTT TERM 819 779154 - 779166 + Gr 71 -7.7 -3.72027 | AGGGACAGGCGGTTT CGGAT ACG ATCCG TTCTTCATACCGGAT Tpet_0767 780130 - 779249 - | prolipoprotein diacylglyceryl transferase Tpet_0766 778711 - 779301 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 820 779329 - 779341 + gT 76 -4.7 -4.79451 | TCAGCACGGCACTCA GCAGC TGA GCAGC TTTTATGTTTCCAAT TERM 821 779422 - 779442 + gT 72 -5.4 -4.37534 | opp_overlap 779422 779420 AGAGGACAAAATAGA GGCACG TTACTTCGC CGTGCC TTTTCCTGTACCTTT Tpet_0768 780387 - 780127 - | hypothetical protein Tpet_0769 780424 - 780873 + | flavin reductase domain-containing protein TERM 822 780872 - 780898 + F 100 -10.9 -5.1361 | opp_overlap 780876, overlap 780876 AACACGAACTGTTGT GAAAGGCAGGG CTCGC CCCTGCCTTTA TTTTTTCACGTTTCT TERM 823 780876 - 780894 + F 100 -11.7 -5.05153 | opp_overlap 780876, overlap 780872 CGAACTGTTGTGAAA GGCAGGG CTCGC CCCTGCC TTTATTTTTTCACGT TERM 824 780894 - 780876 - f 88 -11.7 -3.54459 | opp_overlap 780872 780876 CGAACTGTTGTGAAA GGCAGGG CTCGC CCCTGCC TTTATTTTTTCACGT Tpet_0770 780966 - 782270 + | alkaline phosphatase TERM 825 782289 - 782268 - T 70 -7.3 -3.91798 | opp_overlap 782268, overlap 782271 GAACCCGTAACGAAA TGAGGGG CGATCTGC CCCCTCA TTTGAACACATCGAG Tpet_0771 783945 - 782287 - | prephenate dehydratase TERM 826 784517 - 784503 - g 80 -5.7 -5.0133 | opp_overlap 784502 GAGTGGCTGAAAAAA CAGGA GTTGA TCCTG CTACCTTTCATGGCC Tpet_0772 784143 - 786014 + | hypothetical protein TERM 827 786033 - 786016 - T 95 -12.7 -3.61764 | opp_overlap 786016 CGATGAATTTTTAAA GCGGGGA GAAT TCCCCGC TTTTTTAAAGTCCGA TERM 828 786016 - 786033 + T 100 -12.7 -5.0538 | opp_overlap 786016 CGATGAATTTTTAAA GCGGGGA GAAT TCCCCGC TTTTTTAAAGTCCGA Tpet_0773 786685 - 786038 - | hypothetical protein Tpet_0774 787243 - 787791 + | hypothetical protein TERM 829 787782 - 787771 - f 71 -2.2 -5.0666 | GAGTTAAAAAATAAA CTCA AAAA CGAG GAGGTATAGAAGATG Tpet_0775 787795 - 787977 + | ribosomal protein L32 TERM 830 788016 - 788045 + GF 72 -6.3 -4.27316 | opp_overlap 788018 TGATGGGTGGTGACA GAGCGCCCGATGA AATT TTGAAGGGCGCTC TTTTGGCTTCAAAAG TERM 831 788110 - 788126 + GF 70 -6.6 -4.02132 | opp_overlap 788102 788110, overlap 788106 788104 AGAAATAGTGAGGAA CAAAGG TCTTC CCTTTG TTTCTGCCTTTGAAA TERM 832 788391 - 788412 + GF 78 -6.7 -4.58773 | gap 1, overlap 788386 788396 GGGCGAACGCCAAGG TCAGACCAGA GCA TCTGGT-TGA TTTTGCTTTCATGGG TERM 833 788396 - 788408 + GF 71 -7.7 -3.78998 | overlap 788391 788386 AACGCCAAGGTCAGA CCAGA GCA TCTGG TTGATTTTGCTTTCA TERM 834 788735 - 788751 + GF 70 -6.6 -4.08767 | TCCCTCCTTGGGGCG CTTCTC ATGAA GAGAAG TTTTGACAAGATGAA Tpet_0776 787961 - 788965 + | putative glycerol-3-phosphate acyltransferase PlsX Tpet_0777 788937 - 790757 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing Tpet_0778 790775 - 791107 + | iojap-like protein clpX 791121 - 792341 + | ATP-dependent protease ATP-binding subunit TERM 835 793285 - 793269 - g 86 -9.4 -4.49644 | opp_overlap 793269 ATGAAAAAGCGAAAA GGGGGA TGTTT TCCCCC TTGAATTTGAACGCC Tpet_0780 792338 - 793321 + | metalloendopeptidase glycoprotease family TERM 836 793337 - 793353 + T 91 -8.7 -4.97405 | TCTTTCTTTTCGCTT GAAGCGG ACG CCGTTTC TTTCTTTTTCTCACT Tpet_0781 793545 - 793318 - | FmdB family regulatory protein TERM 837 793479 - 793499 + g 76 -8.3 -4.04806 | TAACCTCCGGTGATT CGTTTATGC CGT GCATAACCG TTGTTTCGTATCCAC TERM 838 793700 - 793714 + H 79 -4.2 -5.22006 | TACCATTAATCTGTC GCCAGT TCA ACTCGC TTTTTCTTCTGATAA TERM 839 794254 - 794210 - g 87 -9.6 -4.22948 | opp_overlap 794212 794216 794221 794223 794243, overlap 794250 AAAAGCGATTGAAAA GGGAGATTCTTGAGA-AAGAAA TTC TCTCTTATCTCAAGTA-CTCCC GTGACGAGAGATACG Tpet_0782 793768 - 795120 + | response regulator receiver modulated diguanylate cyclase TERM 840 795176 - 795195 + G 70 -5 -4.41241 | overlap 795177 AAGCTCGTTTCGGAT CTGGAAAC ACCG GTTTCCAC TTTTATGAAGGTTTC Tpet_0783 795149 - 796522 + | anthranilate synthase component I TERM 841 797107 - 797079 - g 76 -8.3 -4.16837 | opp_overlap 797081, overlap 797076 797080 797099 GAGAATCATAAAGAA CTTCCTGAACATC CAG GATATTCAGAAAA AGAAAGTTTCCGAAG TERM 842 797106 - 797080 - g 70 -9.6 -3.09017 | opp_overlap 797081, overlap 797076 797079 797099 AGAATCATAAAGAAC TTCCTGAACATC CAG GATATTCAGAAA AAGAAAGTTTCCGAA Tpet_0784 796519 - 798159 + | anthranilate phosphoribosyltransferase TERM 843 798794 - 798773 - g 70 -5.1 -4.41241 | overlap 798776 GAAAGTGGCATAAAA GATCCCAGA GAAC TCAAGGATC TGCGGGGGAAGGTGA Tpet_0785 798200 - 798892 + | indole-3-glycerol-phosphate synthase Tpet_0786 798880 - 799497 + | phosphoribosylanthranilate isomerase TERM 844 800536 - 800499 - g 82 -12.9 -3.05596 | gap 1 GATGCCTTCATCGAA CTTTCAAG-GCTGGAAGG GAT CATTCCAGCACTCGAAAG CTCTCACGCACTGGC Tpet_0787 799500 - 800669 + | tryptophan synthase subunit beta Tpet_0788 800666 - 801385 + | tryptophan synthase, alpha subunit TERM 845 801410 - 801383 - T 100 -15 -4.08692 | opp_overlap 801389, overlap 801389 GAACTCCTCGGAAAA TAAAAACCCCGC CTGC GCGGGGTTTTCA CACGTACTGGTAACC TERM 846 801404 - 801389 - T 100 -11.8 -5.45802 | opp_overlap 801389, overlap 801383 CTCGGAAAATAAAAA CCCCGC CTGC GCGGGG TTTTCACACGTACTG TERM 847 801389 - 801404 + T 93 -11.8 -4.10161 | opp_overlap 801389 801383 CTCGGAAAATAAAAA CCCCGC CTGC GCGGGG TTTTCACACGTACTG Tpet_0789 802343 - 801408 - | radical SAM domain-containing protein Tpet_0790 802921 - 802349 - | beta-lactamase domain-containing protein Tpet_0791 803712 - 802918 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tpet_0792 804257 - 803673 - | isochorismatase hydrolase TERM 848 804005 - 803993 - GR 73 -2.6 -5.09173 | GAACATCGGAAAAAA CGGG AACGG CCCA CCTTTTATCCACTTC Tpet_0793 805035 - 804259 - | flagellin domain-containing protein TERM 849 805247 - 805226 - R 100 -12.3 -4.5442 | opp_overlap 805226 805245, overlap 805227 GGTTGAAGCAGAAAA CCCTGCCTC ATAA GAGGCAGGA TGGTTCACCATTCGT TERM 850 805226 - 805247 + r 71 -10.1 -2.73721 | opp_overlap 805226 805227, overlap 805245 GGTTGAAGCAGAAAA CCCTGCCTC ATAA GAGGCAGGA TGGTTCACCATTCGT TERM 851 805246 - 805227 - R 100 -13.6 -3.3217 | opp_overlap 805226 805245, overlap 805226 GTTGAAGCAGAAAAC CCTGCCTC ATAA GAGGCAGG ATGGTTCACCATTCG Tpet_0794 806406 - 805252 - | major facilitator transporter TERM 852 805399 - 805386 - G 84 -8.1 -4.60073 | CAGAGAACCAGAAAA CACCG TACA CGGTG AAGAACATTCCGTAA TERM 853 806623 - 806600 - g 76 -4.4 -5.07567 | opp_overlap 806604 TCAGAGTGGAAAAAA GGGAAGCCGC TTAC GTGGCCTTCC GTGGGAAACCGCCTT Tpet_0795 806467 - 807543 + | peptidase dimerisation domain-containing protein Tpet_0797 809724 - 808867 - | integral membrane sensor signal transduction histidine kinase Tpet_0796 807533 - 808921 + | pyruvate carboxylase subunit B TERM 854 808994 - 809024 + gT 100 -8.4 -6.23317 | gap 1, overlap 808998 TCGAAGAATTCTCTT GCGA-GGTACAGG CCCAGT CCTGTACCTTTGC TTTTTTTCTTTTTCT TERM 855 808998 - 809019 + gT 93 -10.2 -4.57518 | overlap 808994 AGAATTCTCTTGCGA GGTACAGG CCCAGT CCTGTACC TTTGCTTTTTTTCTT TERM 856 809330 - 809348 + gT 77 -6.8 -4.41844 | overlap 809326 TCGAGCTTGGCGAAT TCGTAGAA TTC TTCTATGA TTTTCTGCAAATTTT Tpet_0798 810383 - 809721 - | two component transcriptional regulator Tpet_0799 811177 - 810380 - | ABC-3 protein TERM 857 810651 - 810663 + g 73 -4.1 -4.85599 | GAGGTGATCAGAAAA CGGAT GAG ATCTG TTTTTATGCCATAAA Tpet_0800 811896 - 811174 - | ABC transporter related TERM 858 811811 - 811829 + g 71 -9.6 -3.28745 | opp_overlap 811811 811808 811807, overlap 811807 ACTCCAACGAATTCA CCTTCTTC CAC GGAGAAGG TTACATTCTTCAGGA Tpet_0801 812696 - 811893 - | periplasmic solute binding protein TERM 859 812049 - 812069 + g 77 -3.3 -5.14965 | overlap 812032 CTGCTGTGGTTCTCT GAACAGG GCAGCAA TCTGTTC TTTTTTCCTGAGGAT Tpet_0802 813058 - 812693 - | ferric uptake regulator family protein TERM 860 812755 - 812782 + g 74 -3.5 -5.03145 | AAAACAGATGACTTT CTTCAGAAAAA TCGTAC TTTTCCTGGAG TTTTTTAAGAAATTC TERM 861 813066 - 813090 + H 91 -11.5 -3.77808 | opp_overlap 813074 ATCCTCATACTCTCA CCTGCAAATGC AAA GCATTTGCAAG TTATATTGTACTACA Tpet_0803 813280 - 814377 + | lysine 2,3-aminomutase YodO family protein Tpet_0804 814948 - 814394 - | nitroreductase Tpet_0805 815808 - 814951 - | acetamidase/formamidase TERM 862 815337 - 815307 - G 100 -15.5 -3.7732 | CTCCCAGAGCAAGAA GTGCACCTTCCTG GAACA CTGGAAGGTGCAC CGTGACGTTCTCTGT Tpet_0806 818304 - 815821 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 863 816286 - 816303 + g 73 -4.1 -4.78753 | TTTGTACTTTCTCGT GACGCTT CTGA GAGTGTC TTTTCTTGGTCTTGG TERM 864 816980 - 816990 + g 91 -6.8 -5.45802 | overlap 816975 GAGATCTCAAGGAGC GGGA AGT TCCC TTTTTCTTTTCCGAG Tpet_0807 818463 - 819191 + | radical SAM domain-containing protein TERM 865 819193 - 819209 + T 81 -9.4 -4.13014 | opp_overlap 819193 AACTCTTTCAATAAA GAGGGC AGAGC GCCCTC TTTTCAAGATCTGAA TERM 866 819209 - 819193 - T 85 -10.1 -4.15788 | opp_overlap 819193 AACTCTTTCAATAAA GAGGGCA GAG CGCCCTC TTTTCAAGATCTGAA TERM 867 819218 - 819248 + T 87 -6.2 -5.24449 | opp_overlap 819219 819227, overlap 819219 CGCCCTCTTTTCAAG ATCTGAACATCTCT TTG AGAGATGTGTAGAG TTTTTTGAATTTCTC TERM 868 819219 - 819247 + T 79 -9.7 -3.73043 | opp_overlap 819219 819227, overlap 819218 GCCCTCTTTTCAAGA TCTGAACATCTCT TTG AGAGATGTGTAGA GTTTTTTGAATTTCT Tpet_0808 820691 - 819213 - | xylulokinase Tpet_0809 822220 - 820691 - | ABC transporter related TERM 869 821788 - 821812 + g 82 -11.5 -3.53811 | GGGCGGTGGTGAGAT TTCTCACCAGA GCG TCTGGAGAGAA TTTGGCGCCGATGAG TERM 870 822236 - 822264 + r 100 -14.6 -4.66264 | opp_overlap 822238, overlap 822238 TCGATCACCCCTGAA AACGAGGAGGGG AAACA CCCCTCCTCGTG TTTTTCAGAATTTTA TERM 871 822238 - 822262 + r 100 -17.2 -3.9318 | opp_overlap 822238, overlap 822236 GATCACCCCTGAAAA CGAGGAGGGG AAACA CCCCTCCTCG TGTTTTTCAGAATTT TERM 872 822262 - 822238 - R 100 -17.2 -4.10161 | opp_overlap 822236 822238 GATCACCCCTGAAAA CGAGGAGGGG AAACA CCCCTCCTCG TGTTTTTCAGAATTT Tpet_0810 823240 - 822269 - | periplasmic binding protein/LacI transcriptional regulator Tpet_0811 823984 - 823265 - | polysaccharide deacetylase Tpet_0812 824952 - 823999 - | monosaccharide-transporting ATPase TERM 873 824768 - 824738 - G 95 -14.6 -3.54653 | AGCGCCACCATAGAA CCGGGGGAGAGGTC GAT GGCTCCTCCCCCGG AGATGATGACAAAGG Tpet_0813 826128 - 824965 - | iron-containing alcohol dehydrogenase Tpet_0814 827281 - 826142 - | ROK family protein Tpet_0815 828351 - 827389 - | radical SAM domain-containing protein TERM 874 828345 - 828357 + g 71 -3.4 -4.73388 | TCTCAATTTTCTTTT TCGA CATAC TCGA TTTTTGCTCCCAGTT Tpet_0816 829597 - 828332 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 875 829505 - 829529 + g 76 -4.2 -5.00884 | ATCGCATAGAATCGC CGCTGCCATT ATTGG AAGAGCAGCG TTTTTTGAACCCGAT Tpet_0817 830170 - 829598 - | putative diguanylate cyclase Tpet_0818 830247 - 831431 + | RecB family-like nuclease Tpet_0819 832372 - 831413 - | inner-membrane translocator TERM 876 832150 - 832130 - G 72 -6.2 -4.3534 | gap 1 GTGGAACCAGGAAAA TCCGATCCC TATG GGGAT-GGA AAGCAAGAAACCGAG Tpet_0820 833403 - 832369 - | inner-membrane translocator Tpet_0821 834923 - 833400 - | ABC transporter related TERM 877 833444 - 833461 + g 76 -4.1 -5.07567 | CTGCCATCATGAGCC CTACTTC CTCT GGAGTGG TTTTTTCCGGTCTGA TERM 878 833764 - 833786 + g 72 -6.5 -4.30791 | opp_overlap 833763, overlap 833763 GGCCTGATATCGAAC TTTTCAAAA AGTTG TTTTGAAAA TCTTTTTATTTCCTT TERM 879 834543 - 834554 + g 79 -4.4 -5.23016 | TATTGTTAATCCGTA CTCT TCCG AGAG TTTTTTAACTTCTTT TERM 880 834960 - 834941 - R 100 -13.6 -4.10161 | GATCACCCCTGAAAA GAGGGGGA GGAC TCCCCCTC AGAATGGGAATTCGA Tpet_0822 836038 - 834959 - | basic membrane lipoprotein TERM 881 835646 - 835663 + g 80 -9.9 -3.92542 | opp_overlap 835641 835645 CGCCACGTAACCTAC CAGGAAG GCGG CTTCCTG TTCTTTGAAGGTGAA Tpet_0823 837903 - 836035 - | hypothetical protein TERM 882 837272 - 837306 + g 76 -5.1 -4.87803 | overlap 837278 TACTCGGCCTGGTTT TTCGAAGAGGCGATT TCCTC GATCGCTTCTTTTAA TTTTGTTTCCAGATC TERM 883 837278 - 837300 + g 80 -6.3 -4.81644 | overlap 837272 GCCTGGTTTTTCGAA GAGGCGATT TCCTC GATCGCTTC TTTTAATTTTGTTTC Tpet_0824 837954 - 840020 + | DNA ligase, NAD-dependent TERM 884 840104 - 840121 + G 70 -9.9 -3.08471 | opp_overlap 840101, overlap 840086 CCACCTGAATTACGA GGTTCTC TGTT GAGAACC TTCGATGACCTTGTG Tpet_0825 840011 - 840775 + | hypothetical protein TERM 885 841600 - 841576 - g 72 -8.7 -3.7511 | opp_overlap 841576, overlap 841580 841587 841590 TTCGTCATAAGAGAA GAAATGAAGAA GTA TTCTCCATTCC TTTTGGAGAAACCCG TERM 886 841596 - 841580 - g 72 -5.9 -4.49353 | opp_overlap 841576, overlap 841576 841587 841590 TCATAAGAGAAGAAA TGAAGAA GTA TTCTCCA TTCCTTTTGGAGAAA obgE 840772 - 842079 + | GTPase ObgE TERM 887 842315 - 842337 + G 72 -5 -4.59109 | AGAGGAGGCGTTTCT TACTCTAT CTTCACA ATAGAGTA TTTTTCAGAGATCTA Tpet_0827 842063 - 842653 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Tpet_0828 842643 - 843563 + | nifR3 family TIM-barrel protein Tpet_0829 843566 - 844036 + | rubrerythrin TERM 888 844125 - 844149 + G 70 -10.1 -2.97707 | overlap 844122 844129 AAGTTGAAGGCGATA TCGATCCTTTC TGA GAGAGGATTGA TGGTTGTTCGTGTGG TERM 889 844298 - 844308 + G 72 -3.2 -5.01732 | GTTGAACATTCTGGC TCGT CAG ACGG TTTTTTCAAAGCGTT TERM 890 844955 - 844939 - g 74 -3.7 -4.93296 | overlap 844950 CCATTATCAGAAAAA CCGAA GAAATGG TTCGG AAGATATCCGAAGGG TERM 891 844959 - 844987 + G 71 -6.8 -4.08216 | gap 1, opp_overlap 844950 844960 844962, overlap 844960 844962 GAAATGGTTCGGAAG ATATC-CGAAGGG AAAA CCCTTCGAGATAC TTTTGCAGAAAGTGG TERM 892 844986 - 844960 - g 73 -10.3 -3.0264 | gap 1, opp_overlap 844960 844959 844962, overlap 844950 844962 AAATGGTTCGGAAGA TATC-CGAAGGG AAAA CCCTTCGAGATA CTTTTGCAGAAAGTG TERM 893 844960 - 844986 + G 73 -10.3 -3.04715 | gap 1, opp_overlap 844950 844960 844962, overlap 844959 844962 AAATGGTTCGGAAGA TATC-CGAAGGG AAAA CCCTTCGAGATA CTTTTGCAGAAAGTG Tpet_0830 844038 - 845237 + | type II secretion system protein Tpet_0831 845234 - 845617 + | hypothetical protein Tpet_0832 845619 - 846599 + | hypothetical protein Tpet_0833 846571 - 847119 + | hypothetical protein Tpet_0834 847116 - 847532 + | hypothetical protein Tpet_0835 847529 - 847990 + | hypothetical protein TERM 894 849506 - 849487 - g 72 -6.4 -4.20024 | overlap 849502 AGAAAAAATAGGAAA CTTCCTCT TCAT AGAGGGAG CCAATGGTTCCGTTG TERM 895 849553 - 849539 - g 80 -10 -3.95725 | AACGCTGAAGAACAA CTGGAG AAA CTCCAG AGTGAACACACACAA TERM 896 849817 - 849801 - g 70 -5.1 -4.39571 | overlap 849803 TCGATAAAGCGAAAA GCGTTGT TTC ACAACTC TACAGTGTATCCATA Tpet_0836 848006 - 851854 + | type II and III secretion system protein TERM 897 851876 - 851863 - g 100 -9.5 -5.14626 | opp_overlap 851863 851865, overlap 851865 ACCATGAAAAGAAAA CCGGC CGTG GCCGG CCTTTTTTATCCCTC TERM 898 851865 - 851878 + G 100 -9.5 -5.28176 | opp_overlap 851863 851865, overlap 851863 CATGAAAAGAAAACC GGCCG TGGC CGGCC TTTTTTATCCCTCCA TERM 899 852138 - 852111 - g 79 -9.8 -3.75169 | opp_overlap 852112, overlap 852114 852116 TATTATCGGACCAAA TCACACAGGCCT GGGA AGGCCTGTGGGT GTGTGGCCAGAGGGT TERM 900 852112 - 852137 + G 82 -13.3 -2.87132 | opp_overlap 852111 852114 852116 ATTATCGGACCAAAT CACACAGGCCT GGGA AGGCCTGTGGG TGTGTGGCCAGAGGG TERM 901 852135 - 852114 - g 88 -14.5 -2.97171 | opp_overlap 852112, overlap 852111 852116 TATCGGACCAAATCA CACAGGCCT GGGA AGGCCTGTG GGTGTGTGGCCAGAG TERM 902 852133 - 852116 - g 75 -11.3 -3.03701 | opp_overlap 852112, overlap 852114 852111 TCGGACCAAATCACA CAGGCCT GGGA AGGCCTG TGGGTGTGTGGCCAG TERM 903 852396 - 852385 - g 72 -5.8 -4.37658 | AACGCTTTGACAAAA CTCG TAGC CGAG TTCCCAAGTGTTCTG Tpet_0837 851851 - 852684 + | hypothetical protein Tpet_0838 854086 - 852665 - | integral membrane protein MviN TERM 904 852836 - 852848 + g 76 -4.9 -4.82901 | AGCAGAGGACAAGCC GATTT TGA AAATC TTTTTATCGAAGGAA TERM 905 853085 - 853071 - G 72 -5 -4.67354 | AACAGAGACACAAAA CACAAT CCA ATTGCG TACATGAAGAGTATC TERM 906 854062 - 854044 - G 70 -5.2 -4.41548 | opp_overlap 854057 TGATACGGGAGAAAA GCGTTCCC AGA GAGAAAGC GAGCGTTTTCTTTAT Tpet_0839 854154 - 854432 + | anti-sigma-28 factor, FlgM TERM 907 854505 - 854491 - g 71 -7.2 -4.08571 | GGAGAATATGAGAAA TCTTCT GGA AGAAGA ACTGGAAGCGATTGT Tpet_0840 854429 - 854875 + | hypothetical protein Tpet_0841 854878 - 857454 + | flagellar hook-associated protein FlgK Tpet_0842 857460 - 858374 + | flagellar hook-associated protein 3 Tpet_0843 858379 - 858828 + | flagellar assembly protein FliW TERM 908 859048 - 859022 - f 100 -15.2 -3.75153 | opp_overlap 859020 859019 CGCGGTGAAGGGAAA CCACCTTCCTCG GCA CCAGGAAGGTGG GAATATTCTTTTTCA Tpet_0844 859071 - 859970 + | periplasmic binding protein TERM 909 859991 - 860001 + G 78 -5.4 -4.90079 | CTCGTTTTTCCGATA CTGA TAC TCAG TTTTCTTCTTGGAAT TERM 910 860038 - 860063 + G 72 -9 -3.62354 | TGGAAGTGTGCCTCT GGACCCCC TTGAAGTGCT GGGGGTCC TCTTTGGTTTGAAAG TERM 911 860860 - 860901 + G 76 -8.7 -4.04997 | gap 1 CTTCTTTTCTCCCAC GGAGCTTCCAGTCGGCGTTG TAA CGGCGTTGATTGG-AGCACC TTTCCTTGCTTTCCT Tpet_0845 859967 - 860935 + | transport system permease protein TERM 912 861022 - 861005 - g 72 -4.9 -4.55887 | TCTGAAAAACATAAA CCTTTCT GTGA AAAAAGG GGAGTTTTTCGGCAT TERM 913 861635 - 861595 - g 100 -10.4 -4.95155 | gap 1 GTGAGATGATAAAAA CCGGAGCACCCCCAGAGGT GGTG ACCGA-AGAGGTGCTCCGG AATACGTTCGAAACG Tpet_0846 860937 - 861707 + | ABC transporter related Tpet_0847 862667 - 861690 - | Acetyl xylan esterase TERM 914 862163 - 862150 - G 72 -6.7 -4.26903 | opp_overlap 862158 TCTACCCGAGGAAAA GAAGC AGCG GCTTC AACGGCTCTGACAGC Tpet_0848 865010 - 862674 - | glycoside hydrolase family 3 protein TERM 915 863454 - 863492 + g 89 -11.2 -4.08706 | gap 1 GAGGTTTGCCATGTC TCTGGACTCACCGGTTG TGCAAT CAAG-GGTGAGTCCAGA TTTGTCTCCTACGAC TERM 916 863847 - 863873 + g 71 -7.4 -3.99353 | opp_overlap 863846 863847 CTGAAGAGGCAAAAT TCCATCATTCTT GAG AAGGATAATGGA TTTCCTTGCTATATC TERM 917 864602 - 864613 + g 76 -2.2 -5.37043 | TCATATCCTCTCTGA TGGC GGTG GTCA TTTTTTCTATGAGAT Tpet_0849 866014 - 865052 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 918 865186 - 865198 + g 79 -7.7 -4.49981 | GATACTCTGCCTGCT CTGTC TCG GACAG TTTTATCCTGATGTC TERM 919 865952 - 865991 + g 81 -3.6 -5.36441 | gap 1 AGCCACTATTCTCGT TCTGGAGAAGATGCTC-CC TAT GGTGAAGATCTTCGTCAGA TTTTTTATCTCAAGA Tpet_0850 867008 - 866001 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 920 866061 - 866081 + g 72 -4.7 -4.62085 | TCTGTGGCCCGGCAG GTATTCCTT GAG AGGGGGTAC TTCTTTTTTGCACCT Tpet_0851 867864 - 867010 - | binding-protein-dependent transport systems inner membrane component Tpet_0852 868888 - 867881 - | binding-protein-dependent transport systems inner membrane component TERM 921 868915 - 868941 + r 74 -10.7 -2.62439 | opp_overlap 868916, overlap 868914 868912 TCCTCTTCTCTTTAA AGGACCGGGGG TTGTC CCCCCGGCCCC CTGTTTGAAAGTATT TERM 922 868940 - 868916 - R 100 -16.4 -3.53012 | opp_overlap 868915 868914 868912 CCTCTTCTCTTTAAA GGACCGGGGG TTGTC CCCCCGGCCC CCTGTTTGAAAGTAT Tpet_0853 870839 - 868962 - | extracellular solute-binding protein Tpet_0854 871060 - 872103 + | endo-1,4-beta-xylanase TERM 923 872126 - 872096 - T 100 -17 -4.5002 | opp_overlap 872101 872104, overlap 872101 AAAAGATAGAAGAAA GAAAATGAGGGGGC GAT GCCCCCTTATTTTC AGCAGTATCTCTTTT TERM 924 872121 - 872101 - T 100 -11.1 -5.16038 | opp_overlap 872101 872104, overlap 872096 ATAGAAGAAAGAAAA TGAGGGGGC GAT GCCCCCTTA TTTTCAGCAGTATCT TERM 925 872101 - 872121 + T 100 -13.3 -4.10925 | opp_overlap 872096 872101, overlap 872104 ATAGAAGAAAGAAAA TGAGGGGGC GAT GCCCCCTTA TTTTCAGCAGTATCT TERM 926 872104 - 872118 + T 100 -12.8 -4.17762 | opp_overlap 872101 872096, overlap 872101 GAAGAAAGAAAATGA GGGGGC GAT GCCCCC TTATTTTCAGCAGTA Tpet_0855 873207 - 872125 - | mannonate dehydratase TERM 927 873163 - 873174 + g 74 -5.8 -4.59773 | TATTTGTTCCAGTGT CACG GTAT CGTG TTTTTCACCATACCA Tpet_0856 874823 - 873204 - | mannitol dehydrogenase domain-containing protein TERM 928 873375 - 873389 + g 78 -5.7 -4.78848 | ATGATCATCCGTGGA TTCGG GATCG CCGAA TTTTATCTTTGAAAC TERM 929 874690 - 874721 + g 76 -4.4 -5.02287 | overlap 874693 874696 CCCCTGAATATGTTT CCACCACCGAAATG AACC CATTTCGGTTGTTC TTTTGTATTTTTCTC TERM 930 874693 - 874718 + g 93 -10.5 -4.5478 | overlap 874690 874696 CTGAATATGTTTCCA CCACCGAAATG AACC CATTTCGGTTG TTCTTTTGTATTTTT TERM 931 874696 - 874715 + g 90 -10.8 -4.30704 | overlap 874693 874690 AATATGTTTCCACCA CCGAAATG AACC CATTTCGG TTGTTCTTTTGTATT Tpet_0857 875855 - 874836 - | ribokinase-like domain-containing protein Tpet_0858 876463 - 875852 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 932 876129 - 876160 + g 81 -3.8 -5.27335 | gap 1, overlap 876109 876108 TTTACAAGTTCGGTG GGTGTCATC-ACA CCGGGCA TGTAGAAGACACC TTTTTCTTTGCAGAA TERM 933 876529 - 876509 - R 70 -2.5 -5.01732 | AATGTTTCGAAAAAA CCAAAAATC ATA GATCTACGG ATTTCAATATCCAAG Tpet_0859 877273 - 876533 - | transcriptional regulator IclR-like protein TERM 934 877792 - 877761 - g 100 -8.2 -5.09521 | gap 1, opp_overlap 877766 GGAAGAAACGAAAAA GAAGCTTCCTGAGAT GAC ACCTCAG-AAACTTC TCAGAGACATGAAGG TERM 935 878002 - 877988 - g 70 -10 -3.07895 | opp_overlap 877988 877987 877995 GTTACGGTGAAGATA CCTCCA CGC TGGAGG GTTTCCTGAGTGCGC TERM 936 878238 - 878226 - g 70 -9.1 -3.31157 | GAACCAGGAGACGAA CTGGG TGA CCCAG CTCCACATAGGCGCC Tpet_0860 877375 - 878730 + | glucuronate isomerase Tpet_0861 878742 - 879188 + | hypothetical protein TERM 937 879197 - 879214 + T 100 -14.1 -4.54727 | opp_overlap 879197 TGTATGAAGAATAAA CCCCCGC ACGA GCGGGGG TTTTAATTTCACAGG TERM 938 879214 - 879197 - T 100 -14.1 -4.48713 | opp_overlap 879197 TGTATGAAGAATAAA CCCCCGC ACGA GCGGGGG TTTTAATTTCACAGG Tpet_0862 879771 - 879238 - | carbohydrate-binding CenC domain-containing protein TERM 939 879827 - 879808 - R 90 -9.2 -4.78107 | opp_overlap 879808 879811, overlap 879809 GATGATGATCAAAAA GGAGGGGG AGCA CCCCCTCA CTTGATGAGTCTGAG TERM 940 879808 - 879828 + r 70 -9 -3.20382 | gap 1, opp_overlap 879808 879809, overlap 879811 GATGATGATCAAAAA G-GAGGGGG AGCA CCCCCTCAC TTGATGAGTCTGAGG TERM 941 879826 - 879809 - R 93 -12.7 -3.46141 | opp_overlap 879808 879811, overlap 879808 ATGATGATCAAAAAG GAGGGGG AGCA CCCCCTC ACTTGATGAGTCTGA Tpet_0863 883004 - 879825 - | endo-1,4-beta-xylanase Tpet_0864 883324 - 884310 + | binding-protein-dependent transport systems inner membrane component Tpet_0865 884321 - 885427 + | binding-protein-dependent transport systems inner membrane component Tpet_0866 885441 - 886436 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpet_0867 886433 - 887449 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 942 888020 - 888006 - g 75 -10 -3.54307 | AACATTGGCGTGAAA GTCGAG GCG CTCGAC GACTACACGGTGAAG Tpet_0868 887463 - 889436 + | extracellular solute-binding protein TERM 943 889469 - 889438 - f 72 -8.6 -3.69341 | opp_overlap 889444, overlap 889443 TCGAACAGAAATGAA TCAGAGCCCCCGGC AAAC GCCGGGGGTTTCAA AACTTTCAAGGAGGG TERM 944 889464 - 889443 - f 86 -12.9 -3.00667 | opp_overlap 889444, overlap 889438 CAGAAATGAATCAGA GCCCCCGGC AAAC GCCGGGGGT TTCAAAACTTTCAAG TERM 945 889444 - 889463 + F 100 -16.4 -3.5936 | opp_overlap 889443 889438 AGAAATGAATCAGAG CCCCCGGC AAAC GCCGGGGG TTTCAAAACTTTCAA TERM 946 889713 - 889751 + G 72 -8.4 -3.78775 | gap 2 GGGGCGTTTGGAATC CCTTCC-CATCAAG-TTC GATGA GAATCTTGGTGAGGAAGG TTTCATGCTGAGAAC Tpet_0869 889492 - 891516 + | Alpha-glucuronidase Tpet_0870 892107 - 891517 - | hypothetical protein TERM 947 891639 - 891676 + g 71 -3.5 -4.82901 | gap 2, opp_overlap 891641, overlap 891641 891642 CGACATTGTCAAGAT C-AG-GGACGGTCGTGG TACCTT CCACGGTCGTCCATTCG TTTTTCTCCAAAAGA TERM 948 891641 - 891672 + g 80 -10.1 -3.88001 | opp_overlap 891641, overlap 891639 891642 ACATTGTCAAGATCA GGGACGGTCGTGG TACCTT CCACGGTCGTCCA TTCGTTTTTCTCCAA TERM 949 891642 - 891671 + g 84 -13.6 -2.92077 | opp_overlap 891641, overlap 891641 891639 CATTGTCAAGATCAG GGACGGTCGTGG TACCTT CCACGGTCGTCC ATTCGTTTTTCTCCA Tpet_0871 893198 - 892104 - | hypothetical protein Tpet_0872 893527 - 893195 - | hypothetical protein Tpet_0873 895527 - 893524 - | ferrous iron transport protein B TERM 950 893960 - 893985 + gr 72 -3.2 -5.0133 | ACCCAGATAAGAATG GCAGAAACGA ATATGA TCGTTCCGGC TTTTTTCAGAAAGTG TERM 951 894898 - 894910 + gr 83 -6.3 -5.03994 | AGCGAAATACCGCGG GTTGA TTC TCAAC TTTTTATCTCTGAGA Tpet_0874 895966 - 895502 - | FeoA family protein Tpet_0875 896852 - 896067 - | hypothetical protein TERM 952 896269 - 896253 - G 80 -9.5 -3.91144 | opp_overlap 896256, overlap 896256 TGGATACTTCACAAA GAACCTT GAA AAGGTTC TGGATAGTCTATCGA Tpet_0877 897141 - 898358 + | IS605 family transposase OrfB TERM 953 898396 - 898372 - T 83 -10.8 -3.63341 | gap 1 AAGAGCTGCCAAGAA TCCCA-TCCCC TTCA GGGGATTGGGA GTGTCAAAAGAACCT Tpet_0878 898744 - 898496 - | hypothetical protein TERM 954 898752 - 898737 - G 100 -11.8 -5.46706 | opp_overlap 898733 898737 ACCTCAAAACAAAAA GGGGGC ATAT GCCCCC TTCGTTTCTATGGAT TERM 955 898737 - 898752 + g 93 -11.8 -3.65696 | opp_overlap 898737, overlap 898733 ACCTCAAAACAAAAA GGGGGC ATAT GCCCCC TTCGTTTCTATGGAT Tpet_0879 899320 - 898772 - | hypothetical protein Tpet_0880 899405 - 901144 + | ABC transporter related TERM 956 901262 - 901276 + G 71 -7.1 -4.13652 | overlap 901266 TCTTCAGTTTACTTT TCCGG ATTCA CCGGA TCTTTTTCTATCATT TERM 957 901266 - 901278 + G 76 -4.1 -5.05079 | overlap 901262 CAGTTTACTTTTCCG GATTC ACC GGATC TTTTTCTATCATTCT Tpet_0881 901157 - 902236 + | peptidase M24 Tpet_0882 902609 - 902220 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 958 902571 - 902589 + g 70 -5.2 -4.45693 | TTCTGTTTCTATTAC GGAGGAGA CTT TTTCCACC TTTATATTTCTCTTG Tpet_0883 903505 - 902669 - | dihydropteroate synthase TERM 959 903033 - 903047 + g 72 -6.4 -4.28994 | opp_overlap 903033, overlap 903042 ATCTCCTTCACCACA TCCTCG TAA TGAGGA TTTTCCTGCATCGTC Tpet_0884 904288 - 903509 - | putative GTP cyclohydrolase TERM 960 904250 - 904264 + g 72 -2.8 -4.93365 | CACCTTTTTTAGAGG GACC ATCCTTG GGTC TTTTTCGTTCTGAAC Tpet_0885 904647 - 904285 - | putative 6-pyruvoyl tetrahydropterin synthase TERM 961 904344 - 904362 + g 71 -3.7 -4.75356 | CCCACAGTTCTATCT CGTGGAG CCTGA CACCGCG TTTTTCCATCTCTTT Tpet_0886 905908 - 904658 - | metal dependent phosphohydrolase TERM 962 905234 - 905212 - G 74 -3.3 -5.00616 | TTTTCTCTGAAAAAA CAGCGACTC TCCAG GTGTGGCTG GTAGTGAATTCACTT Tpet_0887 906428 - 905889 - | putative NTPase TERM 963 906364 - 906342 - G 95 -12.7 -4.13767 | CTCTTCAGTGTAAAA GCCCCCTGC GTTCT GCAGGAGGC ATGATAGTTTCTTGA Tpet_0888 907924 - 906425 - | hypothetical protein Tpet_0889 909043 - 907970 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 964 908084 - 908097 + g 76 -4.5 -5.00616 | opp_overlap 908084 908074 908085, overlap 908085 ATGAACCTCAAGGAA TGGGT CTTT ACCCG TTTTTTGAAGGACAA TERM 965 909092 - 909073 - R 100 -13.6 -4.93365 | opp_overlap 909067 909075 909077, overlap 909050 TTTGAGAATTAAAAA GAGAGCCC AGCT GGGCTCTC TTGAGGTGTATGATT TERM 966 909075 - 909090 + r 73 -10.4 -3.08934 | opp_overlap 909050 909073, overlap 909067 909077 TGAGAATTAAAAAGA GAGCCC AGCT GGGCTC TCTTGAGGTGTATGA Tpet_0890 910383 - 909130 - | phospholipase/carboxylesterase Tpet_0891 910600 - 911820 + | ROK family protein TERM 967 912432 - 912409 - g 76 -8.2 -4.08144 | gap 1 TGGATCAACGACAAA CCCGAAGAGCA AGT TG-TCTCCGGG CCTTACAAACTCTAC Tpet_0892 911851 - 913665 + | extracellular solute-binding protein TERM 968 913672 - 913694 + F 100 -17.7 -3.53012 | GCCATGTGATCTTTC CCCGGCCCC ACTTC GGGGCCGGG TTTCACAAAAACAGA TERM 969 913792 - 913806 + G 74 -8.6 -3.93489 | opp_overlap 913794, overlap 913788 TGCTTGTTACCTACA TAGTGG CAA CCACTA TTGTGTTTATACTTC Tpet_0893 913728 - 914744 + | binding-protein-dependent transport systems inner membrane component Tpet_0894 914748 - 915590 + | binding-protein-dependent transport systems inner membrane component Tpet_0895 915594 - 916586 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 970 916701 - 916691 - g 73 -4 -4.87291 | GAGGTGAAGGAAAAA GAAA TCG TTTC ACTCGTTGGAGAAAG Tpet_0896 916583 - 917389 + | ABC transporter related Tpet_0897 917389 - 917595 + | hypothetical protein TERM 971 918839 - 918821 - g 72 -6.7 -4.26463 | overlap 918832 ACAGAGGAATATAAA CCCAGAA CTGAC TCCTGGG GAACGGTTATAAAAC TERM 972 919543 - 919523 - g 72 -6.1 -4.33956 | overlap 919525 GGGAAAATAGACAAA CCCTTCCAG GAG CTGAAAGCG TTCCACAAAACAAAA Tpet_0898 917576 - 919744 + | glycoside hydrolase family 3 protein Tpet_0899 919760 - 921685 + | glycoside hydrolase family protein TERM 973 921690 - 921716 + F 100 -15.8 -3.53811 | opp_overlap 921688 921686, overlap 921692 GTCCTCAATGAGACT CCTCCCCGGTGC TTC GCGCCGGGGATG TTTCAGAACCGTAAA TERM 974 921692 - 921714 + F 100 -17 -3.34715 | opp_overlap 921688 921686, overlap 921690 CCTCAATGAGACTCC TCCCCGGTGC TTC GCGCCGGGGA TGTTTCAGAACCGTA Tpet_0900 921746 - 923713 + | methyl-accepting chemotaxis sensory transducer TERM 975 923756 - 923736 - f 100 -8.2 -5.50925 | opp_overlap 923738, overlap 923738 AATCAACAGAAAAAA CAGGCGGG GTTAT CCCGCCTT TTTTCTGGGTGTTAA TERM 976 923754 - 923738 - f 90 -10.8 -4.36863 | opp_overlap 923738, overlap 923736 TCAACAGAAAAAACA GGCGGG GTTAT CCCGCC TTTTTTCTGGGTGTT TERM 977 923738 - 923754 + F 100 -11.5 -5.30686 | opp_overlap 923738 923736 TCAACAGAAAAAACA GGCGGGG TTA TCCCGCC TTTTTTCTGGGTGTT TERM 978 923835 - 923821 - g 85 -6.4 -5.18726 | TTTTGAGAATAAAAA GGCTTC CCG AAAGCC TCATCAGAAAGATCG Tpet_0901 923790 - 925340 + | DNA mismatch repair protein MutL Tpet_0902 925645 - 925337 - | hypothetical protein Tpet_0903 926025 - 925642 - | CrcB protein TERM 979 925897 - 925883 - G 100 -6.4 -6.01187 | AACGAAAGAAAAAAA GAACCC ACA GAGTTC ACGATGATCGTGCCA fabG 926792 - 926022 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 980 926551 - 926569 + g 73 -4.4 -4.84761 | ACCAGAACGTCTACC CCGCCGTA TAT TTCGACGG TTTTTCTCACCATGT TERM 981 926741 - 926726 - G 74 -6 -4.56597 | CGTTTTCCGCAAAAA GCTGCG TGAT CGCGGC TCCGATTCCCTGACC TERM 982 926810 - 926831 + r 80 -7.1 -4.57755 | opp_overlap 926800 926812, overlap 926811 926812 926829 TAACACCCCACAGAA AAGGCGGGG TAAC CCCCGCCCG TTTTATCTAATCGGT TERM 983 926811 - 926830 + r 80 -10.6 -3.3393 | opp_overlap 926800 926812, overlap 926810 926812 926829 AACACCCCACAGAAA AGGCGGGG TAAC CCCCGCCC GTTTTATCTAATCGG TERM 984 926812 - 926829 + r 87 -14.1 -2.59876 | opp_overlap 926800 926812, overlap 926811 926810 ACACCCCACAGAAAA GGCGGGG TAAC CCCCGCC CGTTTTATCTAATCG TERM 985 926829 - 926812 - R 100 -14.1 -4.54449 | opp_overlap 926812 926811 926810, overlap 926800 ACACCCCACAGAAAA GGCGGGG TAAC CCCCGCC CGTTTTATCTAATCG Tpet_0905 927808 - 926834 - | thiamine pyrophosphate binding domain-containing protein Tpet_0906 929001 - 927823 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Tpet_0907 929303 - 929004 - | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit Tpet_0908 929918 - 929316 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Tpet_0909 930821 - 929985 - | methyl-accepting chemotaxis sensory transducer TERM 986 930123 - 930144 + g 87 -10.9 -3.90318 | CTTTTCTGAGAGTGA CTCCTTCGA GGTA TCGAGGGAG TTTCTGACCTCCTGA Tpet_0910 931592 - 930831 - | beta-lactamase domain-containing protein TERM 987 931362 - 931343 - G 77 -7.2 -4.37534 | gap 1 AAAGCCAGAGCAAAA TCCCGGATG TGA CAT-CGGGA TCCTGATGCGTGTAG Tpet_0911 931796 - 932284 + | NADH dehydrogenase (ubiquinone), 24 kDa subunit Tpet_0912 932287 - 932667 + | ferredoxin-like protein Tpet_0913 932686 - 934509 + | NADH dehydrogenase (quinone) TERM 988 934787 - 934765 - g 72 -6.2 -4.23104 | CCAAACTCGAAGAAA CTCCCCCTGA TGA TCTGAGAGAG GCTGTGAGAAGGGCC Tpet_0914 934506 - 934934 + | rubrerythrin TERM 989 934940 - 934957 + T 100 -14.1 -5.08601 | opp_overlap 934940 GGAAGTGTGAAGATA CCCCGCC GGAC GGCGGGG TTTTTGTTCAAATCA TERM 990 934957 - 934940 - T 89 -14.1 -3.08867 | opp_overlap 934940 GGAAGTGTGAAGATA CCCCGCC GGAC GGCGGGG TTTTTGTTCAAATCA Tpet_0915 935644 - 934970 - | cyclase family protein TERM 991 935397 - 935416 + g 72 -5 -4.58395 | gap 1, overlap 935398 TCCATTGGTTTCTTC TCCCTG-TC CAC GAGCAGGGG TTTTTCAAAAATGAA Tpet_0916 935678 - 936994 + | transglutaminase domain-containing protein Tpet_0917 936998 - 938035 + | mandelate racemase/muconate lactonizing protein TERM 992 939607 - 939586 - g 71 -7.3 -4.12279 | overlap 939581 939582 GAAAGGCAAAGGAAA GACTCTCCC TCGA GAGAGAATC CATTAGAAGCACAGA Tpet_0918 938032 - 939984 + | putative DNA helicase TERM 993 940030 - 940006 - T 76 -2.8 -5.19328 | gap 1, opp_overlap 940008 940010, overlap 940008 940009 AGTCTATAACAAAAA CATCCCCCCAC TCAT GTGGGGGT-TA TTTTTTTTCGTACAT TERM 994 940008 - 940030 + T 100 -4.1 -5.86965 | gap 1, opp_overlap 940008 940006 940009, overlap 940010 TCTATAACAAAAACA T-CCCCCCAC TCAT GTGGGGGTTA TTTTTTTTCGTACAT TERM 995 940010 - 940027 + T 100 -12.7 -4.99643 | opp_overlap 940009 940008 940006, overlap 940008 TATAACAAAAACATC CCCCCAC TCAT GTGGGGG TTATTTTTTTTCGTA TERM 996 940547 - 940528 - T 77 -10 -3.43853 | opp_overlap 940527, overlap 940526 GGAACTATTGAAACA GGCCATCA AGTT TGACGGCC CTGTTGGAGTCATAT TERM 997 941870 - 941850 - T 100 -14.7 -4.3623 | ATATCAAAAACCAAA GAGGCGGGA TTG CCCCGCCTC AACCTGAACTCTTCG ushA 943423 - 941897 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 998 942530 - 942554 + g 72 -4.9 -4.70319 | GTATCTGTTTTCGAG GTACGGCTTCC CGA GGTACCTGTAC TTTTCGTTTTCGTAC TERM 999 943533 - 943545 + G 72 -4.8 -4.67982 | CACGATTCCCGTGAG CGTG ACCGG CACG TTTTGTTCGCTCAAC TERM 1000 944131 - 944108 - g 72 -8.8 -3.53779 | overlap 944109 TGTTCAAAAGAGTAA TCCTCGGCTG TATG CAACCGAGGG GGGAATACAGAAAGA TERM 1001 944130 - 944109 - g 78 -12.3 -2.71785 | overlap 944108 GTTCAAAAGAGTAAT CCTCGGCTG TATG CAACCGAGG GGGGAATACAGAAAG Tpet_0920 943498 - 944247 + | radical SAM domain-containing protein Tpet_0921 944995 - 944231 - | phosphodiesterase TERM 1002 944661 - 944683 + g 72 -8.6 -3.70364 | ACTTCGAAACTCAGC TTTTTGGGAA GAT TTCTCAAAAA TTCTCTGGTTTTCTC Tpet_0922 946422 - 945028 - | glutamyl-tRNA synthetase TERM 1003 945843 - 945831 - G 71 -7.7 -3.85698 | TTGGGGTGTTAGAAA GGTGA TCT TCACC GCGAAACACATGGGA TERM 1004 946474 - 946498 + r 81 -12.8 -2.58812 | opp_overlap 946475 946491, overlap 946470 946491 TAATATATCAAAAAA AGCCCCGGTG ATGAA CACCGGGGCC TGGATTCGGTTTCGA TERM 1005 946497 - 946475 - R 100 -16.3 -5.62219 | opp_overlap 946474 946470 946491, overlap 946491 AATATATCAAAAAAA GCCCCGGTG ATGAA CACCGGGGC CTGGATTCGGTTTCG Tpet_0923 946720 - 946520 - | cold-shock DNA-binding domain-containing protein TERM 1006 946886 - 946902 + H 76 -3.7 -5.17054 | overlap 946887 TATTTAACTTAATGG GTCTTTC TAT GAAAGAG TTTTTTACCTATTCT Tpet_0924 946954 - 948120 + | Orn/DAP/Arg decarboxylase 2 Tpet_0925 948520 - 948122 - | hypothetical protein Tpet_0926 948811 - 948536 - | hypothetical protein TERM 1007 948759 - 948771 + g 82 -2.6 -5.48028 | TCCAGCCTTTTTTTA GCGG TTTCT CTGC TTTTCTTTTTCTTTC Tpet_0927 949640 - 948816 - | septum site-determining protein MinD TERM 1008 950301 - 950283 - g 82 -11 -3.59979 | GTGGTGGACGGGAAA CCGCTTCC ACC AGAAGCGG TGAATGCCCTACCAG TERM 1009 951417 - 951407 - g 71 -6.8 -4.128 | opp_overlap 951407 AGTGGGACAGATAAA CGGT CTT ACCG TTCTCGACCTTGGAG TERM 1010 952071 - 952059 - g 84 -4.8 -5.31545 | AAGAAGATGAAAAAA CTCC TCGAT GGAG TCCCAGAAGAAAGGA Tpet_0928 949731 - 952115 + | peptidase S16, lon domain-containing protein Tpet_0930 953812 - 952853 - | L-lactate dehydrogenase Tpet_0929 952112 - 952927 + | cobalt transport protein Tpet_0931 953856 - 955049 + | cell envelope-related transcriptional attenuator Tpet_0932 955054 - 955731 + | deoxyribonuclease V Tpet_0933 955803 - 956378 + | hypothetical protein Tpet_0934 956366 - 956905 + | hypothetical protein TERM 1011 957745 - 957734 - g 86 -4.4 -5.46629 | AAGAGTTGAAAAAAA TGCT TTCG AGCA TCAGAGAGAGGTTCC Tpet_0935 956902 - 958194 + | MiaB-like tRNA modifying enzyme YliG Tpet_0936 958191 - 958712 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tpet_0937 958716 - 959279 + | 2'-5' RNA ligase TERM 1012 959381 - 959354 - gf 74 -9.9 -3.30635 | GAAAGGGTTCCATAA TGATCCTGGGT GATGAA ACCCAGGTTCA GCCTGTAGAGGTGAT recA 959272 - 960342 + | recombinase A Tpet_0939 960272 - 960757 + | regulatory protein RecX TERM 1013 961819 - 961807 - g 70 -9.1 -3.31869 | overlap 961802 961805 GACAAAGCGAGAAGA GGAGG ACT CCTCC ACGATATAGGAAAAG Tpet_0940 960757 - 962280 + | metal dependent phosphohydrolase TERM 1014 962306 - 962321 + F 100 -11.8 -5.49579 | opp_overlap 962300 ACGGAAAACCTTCAA GCCCCC ATCA GGGGGC TTTTGTTTTTTGTGA Tpet_0941 962486 - 963472 + | alanine racemase Tpet_0942 963502 - 964758 + | extracellular solute-binding protein TERM 1015 964751 - 964777 + F 100 -16.6 -4.79223 | opp_overlap 964747 964744, overlap 964754 AAATCAACGCACTCC TGTGGTGAGGGG GGG CCCCTCACCTCA TTTTTCCTCATGTGG TERM 1016 964754 - 964774 + F 100 -16.9 -3.29543 | opp_overlap 964747 964744, overlap 964751 TCAACGCACTCCTGT GGTGAGGGG GGG CCCCTCACC TCATTTTTCCTCATG Tpet_0943 964803 - 966134 + | hypothetical protein TERM 1017 966133 - 966151 + F 100 -14.6 -4.61873 | opp_overlap 966117 966130 CCTTCAAGGAATTTT GATGGGGG GGT CCCCCATC TTTTAGTTTCTCGAG Tpet_0944 966185 - 968341 + | hypothetical protein Tpet_0945 968338 - 969210 + | binding-protein-dependent transport systems inner membrane component TERM 1018 969962 - 969974 + G 76 -4.1 -5.0925 | AATACAAACTCTTCC GATGG TTC TCATC TTTTTGATTTTCAGA Tpet_0946 969207 - 970028 + | binding-protein-dependent transport systems inner membrane component Tpet_0947 970041 - 970931 + | glycosidase, PH1107-related TERM 1019 972224 - 972212 - g 72 -4.8 -4.59773 | TTTCAGCTTCAAAAA TCCC AACGA GGGA TACAACGGGAGGATA Tpet_0948 970947 - 973979 + | glycoside hydrolase family protein TERM 1020 974001 - 974022 + F 100 -13 -3.73953 | AACCTTATCGCTCGG GAGCGGGG ATAGCA CCCCGCTC TTTGATCAACCTAAT TERM 1021 974336 - 974315 - g 91 -8.7 -4.98461 | overlap 974306 974316 AAAGAAGAAAAGAAA GTCTCCTCC AGAA GGAGGAGAA GAGAGAAAGAAACCG TERM 1022 974335 - 974316 - g 88 -12.2 -3.55416 | overlap 974306 974315 AAGAAGAAAAGAAAG TCTCCTCC AGAA GGAGGAGA AGAGAGAAAGAAACC Tpet_0949 974183 - 974362 + | hypothetical protein Tpet_0950 975348 - 974434 - | hypothetical protein Tpet_0951 975656 - 978097 + | glycosyltransferase 36 TERM 1023 978128 - 978145 + F 100 -12.7 -5.60993 | opp_overlap 978127 978130 TGATATAGTACAGAC GAGGGGG TACT CCCCCTC TTTTTTTGTGCAGAG Tpet_0952 978210 - 979550 + | Beta-glucosidase TERM 1024 979554 - 979570 + F 100 -15.1 -4.91852 | opp_overlap 979554 CTGGAAGATTGAAAA GGGCGGC CTG GCCGCCC TTTCTTTTTGATACC TERM 1025 979570 - 979554 - f 100 -15.1 -4.28254 | opp_overlap 979554 CTGGAAGATTGAAAA GGGCGGC CTG GCCGCCC TTTCTTTTTGATACC Tpet_0953 979772 - 982216 + | alpha amylase, catalytic region Tpet_0954 982252 - 983487 + | extracellular solute-binding protein TERM 1026 983484 - 983520 + F 100 -16 -3.06696 | gap 1, opp_overlap 983488 983490, overlap 983490 ATTCCTGCTTGGACA GTAACAGAGGCGAGGGG CTCT CCCC-CGCCTCTTTTAC TCTGTTGAAGGAGGA TERM 1027 983516 - 983488 - f 86 -12.4 -3.25823 | opp_overlap 983484 983490, overlap 983490 CTGCTTGGACAGTAA CAGAGGCGAGGG GCTCT CCCCCGCCTCTT TTACTCTGTTGAAGG TERM 1028 983490 - 983514 + F 100 -13.6 -4.43213 | gap 1, opp_overlap 983488 983490, overlap 983484 GCTTGGACAGTAACA GAGGCGAGGGG CTCT CCCC-CGCCTC TTTTACTCTGTTGAA TERM 1029 983514 - 983490 - f 95 -15 -3.19602 | opp_overlap 983490 983484, overlap 983488 GCTTGGACAGTAACA GAGGCGAGGG GCTCT CCCCCGCCTC TTTTACTCTGTTGAA TERM 1030 983772 - 983754 - g 74 -6 -4.57341 | opp_overlap 983754 983753 983756 AATGGCTTTGAAAAA CACCGT CTTTTTC ACGGTG ATTTCGGTTTCTCTG Tpet_0955 983545 - 984426 + | binding-protein-dependent transport systems inner membrane component Tpet_0956 984439 - 985275 + | binding-protein-dependent transport systems inner membrane component TERM 1031 985484 - 985469 - g 74 -3.9 -5.07567 | opp_overlap 985471 TGATATCGGAAAAAA CCGGG CTCGAT CCCAG CACTGTTACAAAACT TERM 1032 985509 - 985498 - g 72 -5.8 -4.3898 | AGCACTGTTACAAAA CTCG TGAA CGAG ATGAAGAGGAAAAGG Tpet_0957 985354 - 986502 + | ROK family protein TERM 1033 986504 - 986526 + T 80 -9.1 -4.07885 | opp_overlap 986505, overlap 986505 AAAGACTAGTGTAAA ATGAGGGGG ATTTC CCCCCTCAC TTTTCCAAGAGGATC TERM 1034 986505 - 986525 + T 83 -12.6 -3.04517 | opp_overlap 986505, overlap 986504 AAGACTAGTGTAAAA TGAGGGGG ATTTC CCCCCTCA CTTTTCCAAGAGGAT TERM 1035 986525 - 986505 - T 100 -13.3 -4.16681 | opp_overlap 986505 986504 AAGACTAGTGTAAAA TGAGGGGGA TTT CCCCCCTCA CTTTTCCAAGAGGAT Tpet_0958 988265 - 986523 - | WD-40 repeat-containing protein TERM 1036 988296 - 988316 + r 93 -14 -3.19293 | opp_overlap 988296 AAATCAGGTTTCAAA GCCCCAGC ACAAA GCTGGGGC TTGACTATTGAGATT TERM 1037 988316 - 988296 - R 100 -14 -3.56836 | opp_overlap 988296 AAATCAGGTTTCAAA GCCCCAGC ACAAA GCTGGGGC TTGACTATTGAGATT Tpet_0959 990873 - 988342 - | pullulanase, type I Tpet_0960 992915 - 990891 - | glycoside hydrolase family 13 protein TERM 1038 992827 - 992837 + g 72 -5.4 -4.4595 | overlap 992829 CCTTCCCACTCGAAG GTGA AAA TCAC TTTTCCGTTTTCTAC Tpet_0961 994073 - 992931 - | hypothetical protein Tpet_0962 994746 - 994084 - | hypothetical protein TERM 1039 994597 - 994569 - G 88 -12.5 -3.56576 | opp_overlap 994566 994565, overlap 994565 AAACGGAAGAAGGAA GCTCCAGGGTG TAGAAAT CACCCTGAAGC GCCATTTTGTATTCG Tpet_0963 994936 - 994751 - | hypothetical protein TERM 1040 994883 - 994897 + g 76 -7.8 -4.33274 | opp_overlap 994882 994883 994885 TGTTATCCAGACAAT CAGGGC CAC GTCCTG TTTTCCTCCTATAGC Tpet_0964 996101 - 994989 - | hypothetical protein Tpet_0965 997781 - 996114 - | alpha amylase, catalytic region TERM 1041 996824 - 996834 + g 74 -5.4 -4.614 | ACAGGAAAGACTCCT CAAC CCA GTTG TTTTCTATCATTCCA Tpet_0966 998043 - 999221 + | extracellular solute-binding protein TERM 1042 999249 - 999268 + F 100 -13.6 -4.14392 | opp_overlap 999249, overlap 999265 TCATTAGTCAAAGAA GAGGGGGA CTTT TCCCCCTC TTTTAAAAATTCAGG TERM 1043 999268 - 999249 - f 100 -13.6 -3.97674 | opp_overlap 999249 999265 TCATTAGTCAAAGAA GAGGGGGA CTTT TCCCCCTC TTTTAAAAATTCAGG TERM 1044 999687 - 999698 + G 76 -4.4 -4.99312 | GTTCGATGGTCTGAA TCCT ACCG AGGA TTTTGTTGTTCTCTT TERM 1045 1000447 - 1000457 + G 71 -6.8 -4.11275 | CTCATTATTCCATGG GCTG TGC CAGC TTTCATTTCCGTTCT TERM 1046 1000857 - 1000873 + G 74 -7.3 -4.371 | opp_overlap 1000850, overlap 1000818 CGGAACCACGACCCC TGTTGGT CAC ACCGACA TTTTGATCTCATACG Tpet_0967 999298 - 1001031 + | binding-protein-dependent transport systems inner membrane component Tpet_0968 1001028 - 1003529 + | binding-protein-dependent transport systems inner membrane component TERM 1047 1003680 - 1003664 - g 73 -7.9 -4.1399 | overlap 1003665 GGAGTCATAGAGAAA TGGGGAG TTC CTCCCCG CAAACTTCCCGGTGC TERM 1048 1003679 - 1003665 - g 75 -11.4 -3.07912 | overlap 1003664 GAGTCATAGAGAAAT GGGGAG TTC CTCCCC GCAAACTTCCCGGTG TERM 1049 1004740 - 1004728 - g 73 -7.7 -4.08216 | TCATCCTCTTCAAAA CACCA TCG TGGTG GTGAACCCAGGAGAA Tpet_0969 1003526 - 1004947 + | alpha amylase, catalytic region TERM 1050 1004968 - 1004986 + F 100 -12.4 -4.86862 | overlap 1004966 1004984 TTCATTGAAGATTCC GGCTGGCT TCC GGCCAGCC TTTTAATTTTTTAAG Tpet_0970 1005082 - 1006524 + | glycoside hydrolase family protein TERM 1051 1006537 - 1006553 + F 100 -13.7 -4.16301 | opp_overlap 1006537 TGAAAGGATCTGAAA GGGGCCT GAA AGGCCCC TTTATGTATAATATA TERM 1052 1006553 - 1006537 - f 100 -13.7 -3.65353 | opp_overlap 1006537 TGAAAGGATCTGAAA GGGGCCT GAA AGGCCCC TTTATGTATAATATA TERM 1053 1007226 - 1007249 + G 79 -7.4 -4.39277 | opp_overlap 1007226, overlap 1007223 1007218 1007227 ACCCCAACCACGCAA GCTATTCCCC TTCA GGGGGATAGG TTTGTTGTGGTGTTA TERM 1054 1007227 - 1007248 + G 77 -10.9 -3.22482 | opp_overlap 1007226, overlap 1007226 1007223 1007218 CCCCAACCACGCAAG CTATTCCCC TTCA GGGGGATAG GTTTGTTGTGGTGTT Tpet_0971 1006675 - 1007265 + | hypothetical protein Tpet_0972 1007300 - 1007689 + | transposase IS200-family protein TERM 1055 1008411 - 1008395 - g 80 -6.5 -4.88918 | overlap 1008398 TTAGTGCAAAGAAAA GAGCCCT GAG ACGGCTC AGAAACCAGATCAAC Tpet_0973 1007674 - 1008882 + | IS605 family transposase OrfB TERM 1056 1008921 - 1008895 - g 74 -7.3 -4.29738 | gap 1, overlap 1008896 TGAGAGCCACCAAAA GTCCCA-TCCCC TTTA GGGGATTGGGAG GAGGTCAAATAGGAA TERM 1057 1008920 - 1008896 - g 74 -10.8 -3.17361 | gap 1, overlap 1008895 GAGAGCCACCAAAAG TCCCA-TCCCC TTTA GGGGATTGGGA GGAGGTCAAATAGGA Tpet_0974 1008867 - 1009349 + | metal dependent phosphohydrolase Tpet_0975 1010073 - 1009306 - | beta-lactamase domain-containing protein TERM 1058 1010120 - 1010095 - R 100 -11.9 -4.56597 | opp_overlap 1010096 1010100, overlap 1010096 CCCTCCGCTCAAAAA CTGAAGGGGGT TGAT ACCCCCTTCAT ATTACCACCAGCCTC TERM 1059 1010119 - 1010096 - R 100 -15.4 -3.33744 | opp_overlap 1010096 1010100, overlap 1010095 CCTCCGCTCAAAAAC TGAAGGGGGT TGAT ACCCCCTTCA TATTACCACCAGCCT TERM 1060 1010096 - 1010119 + r 93 -15.4 -3.01791 | opp_overlap 1010096 1010095, overlap 1010100 CCTCCGCTCAAAAAC TGAAGGGGGT TGAT ACCCCCTTCA TATTACCACCAGCCT TERM 1061 1010100 - 1010115 + r 76 -10.4 -3.36273 | opp_overlap 1010096 1010095, overlap 1010096 CGCTCAAAAACTGAA GGGGGT TGAT ACCCCC TTCATATTACCACCA Tpet_0976 1010319 - 1010122 - | hypothetical protein Tpet_0977 1010540 - 1010325 - | hypothetical protein Tpet_0978 1012290 - 1010614 - | metal dependent phosphohydrolase Tpet_0979 1012437 - 1012637 + | cold-shock DNA-binding domain-containing protein TERM 1062 1012645 - 1012670 + F 72 -3.1 -4.99645 | opp_overlap 1012647 1012650, overlap 1012646 1012650 TTCAGTAAAGAGACG AATCAGCCCCC GCCC GGGGGCTTAAA TTTTCTTTCTCCACT TERM 1063 1012668 - 1012647 - f 77 -10.1 -3.43328 | opp_overlap 1012646 1012645 1012650, overlap 1012650 CAGTAAAGAGACGAA TCAGCCCCC GCCC GGGGGCTTA AATTTTCTTTCTCCA TERM 1064 1012650 - 1012665 + F 88 -11.8 -3.49818 | opp_overlap 1012650 1012647, overlap 1012646 1012645 TAAAGAGACGAATCA GCCCCC GCCC GGGGGC TTAAATTTTCTTTCT TERM 1065 1012665 - 1012650 - f 80 -11.8 -2.85874 | opp_overlap 1012646 1012645 1012650, overlap 1012647 TAAAGAGACGAATCA GCCCCC GCCC GGGGGC TTAAATTTTCTTTCT Tpet_0980 1012759 - 1012974 + | ribosomal protein L31 Tpet_0981 1013008 - 1013382 + | RNA-binding S1 domain-containing protein TERM 1066 1013383 - 1013409 + T 100 -7.2 -5.53991 | opp_overlap 1013388, overlap 1013388 AGAAGCGCATGGTAA AAAAAGCGGGGG TAA TCCCCGCTTTCA TTTTTTTAATAGATC TERM 1067 1013404 - 1013388 - T 100 -10.8 -5.44119 | opp_overlap 1013383 1013388 CGCATGGTAAAAAAA GCGGGG GTAAT CCCCGC TTTCATTTTTTTAAT TERM 1068 1013388 - 1013404 + T 100 -11.5 -4.53225 | opp_overlap 1013388, overlap 1013383 CGCATGGTAAAAAAA GCGGGGG TAA TCCCCGC TTTCATTTTTTTAAT Tpet_0982 1014563 - 1013415 - | ErfK/YbiS/YcfS/YnhG family protein TERM 1069 1014443 - 1014432 - GT 70 -5.8 -4.36903 | TTCAGGAAACACAAA TCCC GCCG GGGA GTAGAGAAGAAAGGT Tpet_0983 1015710 - 1014526 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 1070 1014827 - 1014848 + gr 82 -7.3 -4.6971 | opp_overlap 1014835, overlap 1014829 TTTGTTCTTTCGAGA TGGAGAACG AGAT CGTTCTCTG TTTTCTTCAGCTTTC TERM 1071 1014829 - 1014846 + gr 81 -9.9 -3.9504 | opp_overlap 1014835, overlap 1014827 TGTTCTTTCGAGATG GAGAACG AGAT CGTTCTC TGTTTTCTTCAGCTT TERM 1072 1015281 - 1015297 + gr 79 -3.7 -5.2696 | CTTCTTCGGGTTCCA CAACG AACCAGC CGTTG TTTTTTAGCTTTTCA TERM 1073 1015306 - 1015329 + gr 72 -6.2 -4.29508 | gap 1 GCCGTTGTTTTTTAG CT-TTTCAAGA TTC TCTTGAAACAG TTTGTTGCTGTACAT TERM 1074 1015600 - 1015573 - GR 70 -4.8 -4.42788 | TCCAACGGCAGAAAA CACCACCGGA GAAATCAT TCTGGTGGCG TCCGGCGTCATCACC Tpet_0984 1015952 - 1015713 - | DNA-directed RNA polymerase, omega subunit Tpet_0985 1016560 - 1015937 - | guanylate kinase TERM 1075 1016407 - 1016387 - G 72 -4.7 -4.57073 | overlap 1016388 GACGCGCTTCAAAAA CTCTTCTTC CGT GATGAAGAA ATAATCCTTGCCATC Tpet_0986 1016850 - 1016572 - | hypothetical protein Tpet_0987 1017741 - 1016863 - | hypothetical protein TERM 1076 1017420 - 1017397 - G 72 -9 -3.60475 | gap 1, opp_overlap 1017400 AAGCTCTATTCGAAA GACCTCTCTGA AGT TCAGA-AGGTC TGAGAGTTTCACAGG Tpet_0988 1018929 - 1017775 - | cysteine desulfurase TERM 1077 1018365 - 1018383 + g 72 -10.4 -2.85351 | opp_overlap 1018373, overlap 1018351 CTTCCAGTTTCTCGA GGGAAAAT GGA ATTTTCCC TATCGTCTGAACGGC TERM 1078 1018407 - 1018426 + g 81 -5 -5.12068 | GAACGGCATCGACAT GAACGAGG GCCT CTTTGTTC TTTTTCTTCACTATC Tpet_0989 1019669 - 1018926 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1079 1019504 - 1019492 - G 81 -3.3 -5.34555 | opp_overlap 1019492, overlap 1019485 1019482 CCACATCAGAAAAAA GCCAT GTG AAGGC TCTTTTCCCGAATTT TERM 1080 1019642 - 1019659 + g 71 -3.5 -4.90455 | gap 1 AGTAGAAGTACAGCG TCAGCAGA AGA TCT-CTGA TTTTTCTCACTCTAT Tpet_0990 1020862 - 1019666 - | thiamine biosynthesis/tRNA modification protein ThiI TERM 1081 1020004 - 1019988 - G 78 -6.5 -4.56597 | opp_overlap 1019987 1019994 TCCCCCGTGTAAAAA GCAACCG CAC CGGTTTC CTCTGCTATTTTTTC Tpet_0991 1020931 - 1022004 + | TPR repeat-containing protein TERM 1082 1022066 - 1022092 + G 82 -13.1 -2.88731 | opp_overlap 1022066, overlap 1022063 ATACAGATCTACGAA GGAGGATCTCA AGCTG TGGGATCCTCC TCATTCATTCTGTCC TERM 1083 1022092 - 1022066 - g 77 -10.9 -3.21622 | opp_overlap 1022066 1022063 ATACAGATCTACGAA GGAGGATCTCA AGCTG TGGGATCCTCC TCATTCATTCTGTCC Tpet_0992 1021989 - 1022711 + | peptidase A24A domain-containing protein TERM 1084 1022836 - 1022848 + G 74 -3.3 -5.00616 | TTGTGGATGTTTTCA GACCC GAC GGTTC TTTTTTCGGAAAAGG Tpet_0993 1022712 - 1023887 + | SAM-dependent methyltransferase-like protein TERM 1085 1024020 - 1024030 + G 70 -2.4 -5.0133 | opp_overlap 1024020 AGCCCGATCTGAAAA CTCC CGA GGTG TTTTTTGAGCGCATC TERM 1086 1024933 - 1024945 + G 77 -9.1 -3.84185 | AACAACCATGGTCGC TCCCC TGA GGGGA TTCTATTTGACTCCA Tpet_0994 1023893 - 1025080 + | aspartate aminotransferase TERM 1087 1025917 - 1025899 - g 83 -2.4 -5.63236 | ATGGAAAAATAAAAA CCTTCTTT CTG AAAAACGG CCAGATCGAGGTGGT Tpet_0995 1025118 - 1026761 + | metal dependent phosphohydrolase Tpet_0996 1027350 - 1026748 - | HAD family hydrolase TERM 1088 1027470 - 1027448 - H 73 -4.9 -4.66318 | overlap 1027449 ACCATCGGAATAAAA CTTCTGAGA GGAGA TCCCAGAAA AGCCATAGTGAAACT Tpet_0997 1027478 - 1028791 + | MATE efflux family protein Tpet_0998 1028803 - 1029186 + | hypothetical protein Tpet_0999 1030949 - 1029168 - | sulfatase TERM 1089 1029753 - 1029734 - G 75 -2.8 -5.14163 | gap 1, opp_overlap 1029741 ATTCATCAAGAAAAA CACCGAACG CTT CAT-CGGCG TAATGTATAGCCTGC TERM 1090 1030353 - 1030369 + g 74 -3.7 -5.01732 | CACGTTTTTTCCTTT TCCTATT CCA AAGAGGA TTTTTTGAGAGGGTT TERM 1091 1030941 - 1030928 - G 76 -5.3 -4.82901 | TTGCTGCCAGAAAAA CTATC AGAA GATAG TCGCTCATTTCATTC Tpet_1000 1032696 - 1030951 - | hypothetical protein Tpet_1001 1034201 - 1032693 - | lysyl-tRNA synthetase Tpet_1002 1034685 - 1034215 - | transcription elongation factor GreA Tpet_1003 1035152 - 1034682 - | transcriptional regulator NrdR Tpet_1004 1036024 - 1035149 - | hypothetical protein TERM 1092 1035239 - 1035259 + g 78 -5.4 -4.89063 | overlap 1035241 ATTCAACTTTTTCCC CAGCTCTC TGAGT GAGAGCTC TTTGTTTTTCAATCG TERM 1093 1035241 - 1035257 + g 73 -8 -4.05491 | overlap 1035239 TCAACTTTTTCCCCA GCTCTC TGAGT GAGAGC TCTTTGTTTTTCAAT TERM 1094 1035509 - 1035529 + g 73 -4.1 -4.91285 | opp_overlap 1035518 GAACACAAGAATATC CTTTATAGA CTT TATATAAAG TTTTCTTGTATTCCT TERM 1095 1035868 - 1035853 - G 100 -11.8 -4.37711 | TCATTAAATTCAAAA GCCGCC TCGA GGCGGC AAAAGAATGCAAAGA Tpet_1005 1036974 - 1036030 - | protein of unknown function UPF0052 and CofD Tpet_1006 1037823 - 1036978 - | hypothetical protein TERM 1096 1037314 - 1037289 - G 80 -6.2 -4.7871 | gap 1, opp_overlap 1037289 1037302 AACGAGCATCAAAAA CGAAATCCGCG TCCAT CG-GGATTCCG TGTTTAAATCCGAAA Tpet_1007 1038086 - 1037820 - | hypothetical protein Tpet_1008 1038330 - 1038064 - | hypothetical protein Tpet_1009 1038926 - 1038351 - | hypothetical protein Tpet_1010 1039807 - 1038905 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1097 1039332 - 1039318 - G 76 -2.1 -5.44119 | TGTAGCCGAAAAAAA TCTCG TTCTT CGAAA GCCAGGTCCTTTTTC TERM 1098 1040029 - 1039997 - g 79 -9.3 -4.03078 | opp_overlap 1040014, overlap 1039998 1040009 1040012 1040013 CGACGAGATGACAAA CCTTTCGAAAAAGCA CCG TGCTCTTTTGAAAGA GCACTTTTCTATTCC TERM 1099 1040028 - 1039998 - g 73 -10.6 -3.01365 | opp_overlap 1040014, overlap 1039997 1040009 1040012 1040013 GACGAGATGACAAAC CTTTCGAAAAAGCA CCG TGCTCTTTTGAAAG AGCACTTTTCTATTC TERM 1100 1040014 - 1040033 + G 93 -10.8 -4.7033 | opp_overlap 1039998 1039997 1040013 1040012 1040009 TTTCGAAAAAGCACC GTGCTCTT TTGA AAGAGCAC TTTTCTATTCCCTTC TERM 1101 1040613 - 1040600 - g 70 -2.3 -4.9218 | GATCTATCAGAAAAA GACGG GAAA CCGTG TAACAATAGAGTACG Tpet_1011 1039860 - 1040891 + | radical SAM protein Tpet_1012 1040888 - 1041502 + | PASTA domain-containing protein TERM 1102 1042063 - 1042078 + G 72 -9 -3.53444 | AATCCGGGCTTGAAG CTTCGC GTGA GCGAAG TTTCAGAGAAACTCC Tpet_1013 1041499 - 1042386 + | ribosome small subunit-dependent GTPase A Tpet_1014 1042386 - 1043048 + | ribulose-phosphate 3-epimerase Tpet_1015 1045398 - 1043017 - | DNA mismatch repair protein Tpet_1016 1045829 - 1045395 - | GCN5-related N-acetyltransferase TERM 1103 1046790 - 1046778 - g 72 -4.8 -4.61231 | CGACACTCCGAAAAA CTCC CTTCT GGAG CTTCCCGTAACGGAC Tpet_1017 1045894 - 1047072 + | hypothetical protein TERM 1104 1047153 - 1047171 + G 100 -14.6 -4.53705 | opp_overlap 1047144 ACAGAAGATCGTACT GGTGGGAG TCT CTCCCACC TTTTATATCGCCGTT Tpet_1018 1047076 - 1047942 + | hypothetical protein Tpet_1019 1047920 - 1049080 + | amidohydrolase TERM 1105 1049074 - 1049109 + T 72 -9.8 -3.27498 | gap 1, opp_overlap 1049076, overlap 1049076 AGTGGAAGTCTTCAG AAGATGAGGGGCCTC AGATCAC GAGGCCCC-CATCTA TTCCTATCACCTGTC TERM 1106 1049107 - 1049076 - T 95 -13.1 -3.31322 | gap 1, opp_overlap 1049074 1049076 TGGAAGTCTTCAGAA GATGAGGGGCCTCA GATCA CGAGGCCCC-CATC TATTCCTATCACCTG TERM 1107 1049076 - 1049107 + T 86 -12.4 -3.20078 | gap 1, opp_overlap 1049076, overlap 1049074 TGGAAGTCTTCAGAA GATGAGGGGCCTC AGATCAC GAGGCCCC-CATC TATTCCTATCACCTG Tpet_1020 1049827 - 1049087 - | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 1108 1050087 - 1050076 - g 73 -4.4 -4.87893 | AAGGTGAAGGAAAAA GATG GCTA CATC CTCCATTATCTGGAT Tpet_1021 1049917 - 1051038 + | threonyl/alanyl tRNA synthetase, SAD Tpet_1022 1051029 - 1051823 + | hypothetical protein Tpet_1023 1051813 - 1052601 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Tpet_1024 1052598 - 1053809 + | S-layer domain-containing protein TERM 1109 1053852 - 1053827 - f 88 -11.9 -3.48276 | opp_overlap 1053832, overlap 1053810 1053832 TCCTTTTTCAGAGAA GAAAAGGGGGC GCAA GCCCCCTTTTT TGTTCGAGTGGTATA TERM 1110 1053832 - 1053847 + F 100 -11.8 -5.46657 | opp_overlap 1053832 1053827 TTTCAGAGAAGAAAA GGGGGC GCAA GCCCCC TTTTTTGTTCGAGTG TERM 1111 1053847 - 1053832 - f 100 -11.8 -4.84311 | opp_overlap 1053832, overlap 1053827 TTTCAGAGAAGAAAA GGGGGC GCAA GCCCCC TTTTTTGTTCGAGTG TERM 1112 1054045 - 1054014 - g 80 -6.6 -4.88293 | gap 1, overlap 1054001 AACGTGAAAAAGAAA CTCTCCCTCGCT-CT CGA AGCAGCGAAGATGAG GGGAGAAGTACTCGA ruvB 1053906 - 1054910 + | Holliday junction DNA helicase B Tpet_1026 1054922 - 1055611 + | alanine racemase domain-containing protein Tpet_1027 1055612 - 1055908 + | protein of unknown function YGGT Tpet_1028 1055905 - 1056681 + | ATP-NAD/AcoX kinase TERM 1113 1056801 - 1056791 - g 77 -6.8 -4.41616 | overlap 1056794 1056795 ACTTGTCGAAAGAAA CGAG TCC CTCG CCAGGGAAGTGATCG Tpet_1029 1056678 - 1057385 + | phosphate uptake regulator, PhoU TERM 1114 1057966 - 1057951 - g 75 -3.2 -5.24531 | opp_overlap 1057951 AGGGTGCAGAAAAAA GGTAAC GACT GGTACC TCTTCAATGGAAATT TERM 1115 1059496 - 1059508 + G 71 -3.3 -4.80487 | opp_overlap 1059492 1059488 GAAAAGAGGAACTCC GGGTC GGT GAGCC TTTCTTTTCGTTCTG TERM 1116 1060150 - 1060162 + G 72 -6.3 -4.25104 | opp_overlap 1060149 1060158 CAGATGAGGATATAC GGAAA GAA TTTCC TTTTCATGGAAAACC TERM 1117 1060290 - 1060308 + G 73 -4.6 -4.77165 | TTTGAAAATGAGTTA TTCCAG TGACAAC CTGGAA TTTTCTTATCAGACA Tpet_1030 1057369 - 1060554 + | permease YjgP/YjgQ family protein TERM 1118 1061815 - 1061795 - gf 72 -8.3 -3.63195 | overlap 1061791 CAAAGAGGAAAGCAA GCTTCACGA ACC TCACGAAGC TGAAATCATAATAGG Tpet_1031 1060566 - 1061921 + | replicative DNA helicase TERM 1119 1062102 - 1062090 - gf 80 -9.1 -4.12188 | overlap 1062098 GGATGAGGTGGAAAA GGAGG GAA CCTCC AAGAAGATACCCTAC Tpet_1032 1061896 - 1062795 + | purine nucleoside phosphorylase TERM 1120 1062841 - 1062874 + G 100 -8.9 -5.40072 | gap 1 TACAGCACGATCGCG GGAATGGCAACCTCGC TCG GTGC-GTTGCCGTTCC TTTTTTTAAAACCGC Tpet_1033 1062805 - 1063542 + | zinc/iron permease Tpet_1034 1063548 - 1064453 + | hypothetical protein Tpet_1035 1064458 - 1064880 + | ribonuclease III Tpet_1036 1064834 - 1065562 + | RNA methyltransferase TERM 1121 1066320 - 1066301 - g 72 -5 -4.56597 | overlap 1066283 TTTCGTCTTCAAAAA CCTTGG AGAATTAG CCAAGG CTGTCCAGTAGCTTC Tpet_1037 1065552 - 1066331 + | HAD family hydrolase Tpet_1038 1067135 - 1066311 - | aldo/keto reductase Tpet_1039 1067223 - 1068254 + | threonine aldolase Tpet_1040 1068333 - 1068956 + | hypothetical protein TERM 1122 1068976 - 1068998 + F 100 -14.8 -4.31293 | CTTTCCCCACACCCC GGCGGGCCCG CAA TGGGCCCGTC TTTCTTCCTCTCTCA Tpet_1041 1069117 - 1070190 + | butyrate kinase TERM 1123 1070205 - 1070195 - g 78 -5.4 -4.88407 | opp_overlap 1070195 TGATCGAATGAAAAA TCTC CTG GAGA TGGTTGAACTGGTTC Tpet_1042 1070187 - 1071068 + | phosphate butyryltransferase TERM 1124 1072528 - 1072494 - g 88 -12.2 -3.53444 | opp_overlap 1072494 GTATTTTGTCTTAAA TGTCTTCAGACCGTTC TGT GAACGCCCGGAAGACA TTATCGAAAACTTGG TERM 1125 1072494 - 1072528 + G 73 -10 -3.30159 | opp_overlap 1072494 GTATTTTGTCTTAAA TGTCTTCAGACCGTTC TGT GAACGCCCGGAAGACA TTATCGAAAACTTGG Tpet_1044 1072141 - 1072788 + | hypothetical protein Tpet_1045 1072793 - 1073026 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1126 1073320 - 1073336 + G 84 -7.9 -4.84359 | CTCATACATTGCAGG CGCAGAG CTT CCCTGCG TTTTTGTCAACGTGG Tpet_1046 1073039 - 1074100 + | 2-ketoisovalerate ferredoxin reductase TERM 1127 1074453 - 1074432 - g 79 -7.4 -4.386 | GAACCGTGGAGAAAA GTTGACAA CGATAT TTGTCAAC AACGCGGTGTACGGT Tpet_1047 1074091 - 1074834 + | thiamine pyrophosphate binding domain-containing protein Tpet_1048 1074836 - 1075405 + | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 1128 1075543 - 1075516 - T 93 -12.2 -3.85698 | gap 1, opp_overlap 1075517 1075523, overlap 1075523 CGTCCCCGCCAGAAA GAAAAAAGGGGCT CAA AGCCCC-TTTTTC TTTTTTATCTCTTCC TERM 1129 1075517 - 1075543 + T 100 -12.4 -5.47431 | opp_overlap 1075516 1075523, overlap 1075523 GTCCCCGCCAGAAAG AAAAAAGGGGCT CAA AGCCCCTTTTTC TTTTTTATCTCTTCC TERM 1130 1075537 - 1075523 - T 100 -11.4 -5.72622 | opp_overlap 1075523 1075517, overlap 1075516 GCCAGAAAGAAAAAA GGGGCT CAA AGCCCC TTTTTCTTTTTTATC TERM 1131 1075523 - 1075537 + T 100 -11.4 -5.8096 | opp_overlap 1075516 1075523, overlap 1075517 GCCAGAAAGAAAAAA GGGGCT CAA AGCCCC TTTTTCTTTTTTATC Tpet_1049 1077522 - 1075528 - | excinuclease ABC subunit B TERM 1132 1075678 - 1075690 + g 78 -6.3 -4.61633 | AGAGAGCGTTTTCTT CATCT CAA AGATG TTTTTCACAGTGTCT TERM 1133 1077402 - 1077425 + g 75 -9.5 -3.65313 | TGGTGAAAGTCTTTC CGCTCCCCG TAACAC CGAGGAGCG TTTGAAATCTCATTC TERM 1134 1078516 - 1078504 - g 73 -4.1 -4.75934 | overlap 1078505 GAAAAAAGAAAACAA CTTCC AAT GGAAA AGCACAAGAAAGTTT TERM 1135 1079231 - 1079201 - g 95 -13.4 -3.79113 | ACGCGGTGATAATAA CTTACGGTTCCACA CTC TGTGAAGCCGTAAG CGCTGCAGACGAACT TERM 1136 1079343 - 1079362 + G 76 -8.6 -4.08692 | TGGAAAACCCGTTCT CGTTGTGG AAGA TCACAACG TTTTCACCGGGCTTG Tpet_1050 1077634 - 1079541 + | transketolase TERM 1137 1079592 - 1079562 - f 100 -14.1 -4.4891 | opp_overlap 1079563, overlap 1079563 TCGATTATGATAAAA TTCTACGAGGGGA GAAAA TCCCCTCGTAGAT TTTGTTGTAAGGAGG TERM 1138 1079591 - 1079563 - f 100 -17.6 -3.28864 | opp_overlap 1079563, overlap 1079562 CGATTATGATAAAAT TCTACGAGGGGA GAAAA TCCCCTCGTAGA TTTTGTTGTAAGGAG TERM 1139 1079563 - 1079591 + F 100 -17.6 -4.77165 | opp_overlap 1079562 1079563 CGATTATGATAAAAT TCTACGAGGGGA GAAAA TCCCCTCGTAGA TTTTGTTGTAAGGAG Tpet_1051 1079615 - 1080172 + | translation elongation factor P Tpet_1052 1080188 - 1080553 + | hypothetical protein TERM 1140 1080573 - 1080555 - f 71 -4.6 -4.73617 | AAAAGAAAGAATAAA TCTGGA AAGGAGA TCCAGA CATGAAAACACCGAG nusB 1080575 - 1081003 + | transcription antitermination protein NusB Tpet_1054 1081015 - 1082643 + | formate--tetrahydrofolate ligase Tpet_1055 1082657 - 1083472 + | methenyltetrahydrofolate cyclohydrolase TERM 1141 1083578 - 1083598 + G 100 -4.6 -5.88197 | overlap 1083580 1083581 GTGAGATTTCCGGTG TGCGCCCC AGGAA GGGGCATA TTTTTTTCTCTTTAG TERM 1142 1083580 - 1083596 + G 72 -5 -4.5577 | overlap 1083578 1083581 GAGATTTCCGGTGTG CGCCCC AGGAA GGGGCA TATTTTTTTCTCTTT TERM 1143 1083829 - 1083817 - g 79 -4.1 -5.13473 | ACCACACTGAAAAAA CTCCT CGA AGAAG GTCTCCTTTCCAGAC Tpet_1056 1083469 - 1084653 + | exodeoxyribonuclease VII, large subunit Tpet_1057 1084650 - 1084877 + | exodeoxyribonuclease VII, small subunit Tpet_1058 1084840 - 1086666 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1144 1086947 - 1086937 - g 77 -6.8 -4.39571 | CTCACAAATTGAAAA CCCT CGC AGGG TGTGAAAAACTGAAC Tpet_1059 1086663 - 1086992 + | hypothetical protein TERM 1145 1087371 - 1087357 - g 72 -5.6 -4.42788 | overlap 1087359 TCCAATTCCAGAAAA GTCGCT TAC AGCGCC GTCATGAGACCTGTT Tpet_1060 1087009 - 1088595 + | Dak phosphatase Tpet_1061 1088592 - 1090208 + | TPR repeat-containing protein TERM 1146 1090879 - 1090890 + G 74 -5.8 -4.59773 | GAAGATAAACTTCGC CCTC ATCA GAGG TTTTTCCAAGTACCC Tpet_1062 1090211 - 1091416 + | cofactor-independent phosphoglycerate mutase TERM 1147 1091444 - 1091461 + GT 100 -10.5 -5.10154 | TCTCGCTGTGTCTCG GGGCGCT GATC GGCGCCC TTTTTCGTTTTCCGT TERM 1148 1091934 - 1091948 + GT 73 -2.8 -5.0538 | overlap 1091936 AGCTTTCTCACTCTA CACAAC GCT GTTGTC TTTTTTGACATGGAG TERM 1149 1092116 - 1092157 + GT 91 -10.9 -4.20932 | opp_overlap 1092115 1092113 1092116 1092119 1092120, overlap 1092119 CCCTTCATACAACAG CAACGGTGGGATCCTTCAT GATG ATCGTGGATCCCACCCTTG TTTTCACTCCCTCTT TERM 1150 1092119 - 1092154 + GT 74 -6.8 -4.22214 | opp_overlap 1092119 1092116 1092115 1092113 1092120, overlap 1092116 TTCATACAACAGCAA CGGTGGGATCCTTCAT GATG ATCGTGGATCCCACCC TTGTTTTCACTCCCT Tpet_1064 1092961 - 1092503 - | ferric uptake regulator family protein Tpet_1063 1091413 - 1092588 + | ComEC/Rec2-related protein nusA 1094015 - 1092981 - | transcription elongation factor NusA TERM 1151 1093915 - 1093928 + g 78 -6.7 -4.58395 | AAGTTCTTCCTGTAG GCACT CACC AGTGC TTTTTCGAGGATAGG Tpet_1066 1094480 - 1094028 - | hypothetical protein TERM 1152 1094060 - 1094070 + g 74 -5.4 -4.59293 | GATTCGCTCTCTTCA CATC ATC GATG TTTATTTCGTATTTC TERM 1153 1094540 - 1094506 - H 95 -14.4 -3.21218 | opp_overlap 1094511 1094513 1094528, overlap 1094507 1094513 ACCCCGTATGATGAA TGAAAAACCGGGACCT GAA AAGTCCCGGTCTTTCT CTGGCGGAGAGGGTG TERM 1154 1094539 - 1094507 - H 100 -17.9 -2.52516 | opp_overlap 1094511 1094513 1094528, overlap 1094506 1094513 CCCCGTATGATGAAT GAAAAACCGGGACCT GAA AAGTCCCGGTCTTTC TCTGGCGGAGAGGGT TERM 1155 1094511 - 1094535 + H 78 -8.5 -4.03234 | opp_overlap 1094507 1094506 1094513, overlap 1094513 1094528 GTATGATGAATGAAA AACCGGGACCT GAA AAGTCCCGGTC TTTCTCTGGCGGAGA TERM 1156 1094513 - 1094533 + H 83 -11.1 -3.61232 | opp_overlap 1094507 1094506 1094513, overlap 1094511 1094528 ATGATGAATGAAAAA CCGGGACCT GAA AAGTCCCGG TCTTTCTCTGGCGGA TERM 1157 1094533 - 1094513 - H 100 -13.3 -4.90869 | opp_overlap 1094513 1094511 1094528, overlap 1094507 1094506 ATGATGAATGAAAAA CCGGGACCT GAA AAGTCCCGG TCTTTCTCTGGCGGA Tpet_1067 1094924 - 1096153 + | argininosuccinate synthase Tpet_1068 1096150 - 1097346 + | argininosuccinate lyase TERM 1158 1098254 - 1098233 - g 80 -7.3 -4.67968 | overlap 1098235 GGAAGAAAGAACAAA CACGCTCAT ACTG ATGAGCGCA ATAGACAACCTCGTG TERM 1159 1098252 - 1098235 - g 80 -9.9 -3.92799 | overlap 1098233 AAGAAAGAACAAACA CGCTCAT ACTG ATGAGCG CAATAGACAACCTCG argC 1097343 - 1098362 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1160 1098453 - 1098442 - g 73 -2.2 -5.24291 | AAAAGGAAAAGAAAA GACC TTGG GATC ATCTTCTCCGAGGTG TERM 1161 1098664 - 1098650 - g 73 -2.1 -5.26316 | gap 1, opp_overlap 1098650 GGATGGCAGAAAAAA CG-GCT GAAG AGCTCG GTGTTCCTGTTGAAA argJ 1098379 - 1099572 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Tpet_1071 1099569 - 1100417 + | acetylglutamate kinase Tpet_1072 1100420 - 1101577 + | acetylornithine aminotransferase TERM 1162 1101577 - 1101599 + T 100 -7.6 -5.80727 | opp_overlap 1101580, overlap 1101578 1101580 CCTGAGAGAAATTTG AAAGGGAGGC AAA GCCTCCCTCA TTTTTTCTTCTTTTT TERM 1163 1101578 - 1101598 + T 86 -11.1 -4.02946 | opp_overlap 1101580, overlap 1101577 1101580 CTGAGAGAAATTTGA AAGGGAGGC AAA GCCTCCCTC ATTTTTTCTTCTTTT TERM 1164 1101580 - 1101596 + T 100 -13.7 -3.54636 | opp_overlap 1101580, overlap 1101578 1101577 GAGAGAAATTTGAAA GGGAGGC AAA GCCTCCC TCATTTTTTCTTCTT TERM 1165 1101596 - 1101580 - T 100 -13.7 -3.75418 | opp_overlap 1101580 1101578 1101577 GAGAGAAATTTGAAA GGGAGGC AAA GCCTCCC TCATTTTTTCTTCTT Tpet_1073 1101779 - 1101597 - | hypothetical protein Tpet_1075 1102974 - 1103219 + | regulatory protein, ArsR Tpet_1076 1103216 - 1103560 + | hypothetical protein TERM 1166 1103562 - 1103579 + T 79 -9.8 -3.80855 | opp_overlap 1103561 1103560, overlap 1103558 AGGAAGGAAAATAGC GGGGCC CCTCGT GGCCCC TTGATTTTTGGAGGA TERM 1167 1103872 - 1103901 + T 100 -5.1 -5.87996 | gap 1, opp_overlap 1103876, overlap 1103876 GGGGGCGCCAGAGAT CGAA-GGGATGC CAGAGGA GCATCCCTTTTG TTTTTTTATTCATTC TERM 1168 1103896 - 1103876 - T 70 -9 -3.15999 | opp_overlap 1103872 1103876 GCGCCAGAGATCGAA GGGATGCC AGAGG AGCATCCC TTTTGTTTTTTTATT TERM 1169 1103876 - 1103896 + T 100 -8.3 -5.64328 | opp_overlap 1103876, overlap 1103872 GCGCCAGAGATCGAA GGGATGC CAGAGGA GCATCCC TTTTGTTTTTTTATT Tpet_1077 1104460 - 1103915 - | hypothetical protein Tpet_1078 1105389 - 1104538 - | diguanylate cyclase TERM 1170 1105114 - 1105101 - G 72 -6.7 -4.32402 | TCTGAATCAAAAGAA GAGCA TCTT TGCTC AAAGGCCTTTTTAGA TERM 1171 1105260 - 1105240 - G 89 -6.1 -5.38326 | opp_overlap 1105239, overlap 1105241 1105255 1105256 1105257 1105259 TGAAGTAAAGAAAAA CCCCTCTTT GAA AAAGGGAGG GACTTTCCCCTCGGA TERM 1172 1106738 - 1106763 + r 82 -12.7 -2.82516 | gap 1, overlap 1106729 1106740 GCTTGGCACCCGCCA GAGGTGTGAGGT TTA ACC-CACACCTC TGTGGTCATGGAGCG TERM 1173 1106740 - 1106761 + r 70 -9.5 -2.96216 | gap 1, overlap 1106729 1106738 TTGGCACCCGCCAGA GGTGTGAGGT TTA ACC-CACACC TCTGTGGTCATGGAG TERM 1174 1107482 - 1107464 - R 83 -3.7 -5.45652 | opp_overlap 1107465, overlap 1107465 1107466 ATGTGTAAGAAAAAA GCCCCGC TTGAT GCGGGAA TTCTTATTGATTTAT TERM 1175 1107481 - 1107465 - R 70 -7.2 -3.86307 | opp_overlap 1107465, overlap 1107464 1107466 TGTGTAAGAAAAAAG CCCCGC TTGAT GCGGGA ATTCTTATTGATTTA TERM 1176 1108191 - 1108177 - R 76 -4.2 -5.1244 | overlap 1108178 1108179 TTAGGAAGATAAAAA CCCTGG GCT CCAGAA ATAAGTATTAGCTGT TERM 1177 1108452 - 1108482 + r 83 -11.4 -3.36273 | opp_overlap 1108451 1108449 1108452 1108475, overlap 1108458 1108461 AACCACAAAAATCAT TATGAACAGTTTGT ATG GCAAATTGTTCATA TTCCTCTTAGGAAGA Tpet_1081 1110504 - 1110223 - | CRISPR-associated Cas2 family protein TERM 1178 1110264 - 1110293 + g 75 -6.5 -4.49337 | opp_overlap 1110264, overlap 1110259 TCGTATTGGTTAGAA TGTCTCTTTCTAT CATA ATAGAAGGTGGCA TTTTGTAAATTATCA Tpet_1082 1111497 - 1110514 - | CRISPR-associated Cas1 family protein TERM 1179 1111520 - 1111536 + r 77 -5.1 -5.00616 | opp_overlap 1111521, overlap 1111521 ACCTACACATAACAC AGTTCGT AAT ACGAACA TTTTTTACAAAAAGA TERM 1180 1111521 - 1111535 + r 72 -8.6 -3.60048 | opp_overlap 1111521, overlap 1111520 CCTACACATAACACA GTTCGT AAT ACGAAC ATTTTTTACAAAAAG Tpet_1083 1112025 - 1111507 - | CRISPR-associated Cas4 family protein Tpet_1084 1114319 - 1112028 - | CRISPR-associated helicase Cas3 TERM 1181 1112524 - 1112541 + g 78 -4.9 -4.99861 | gap 1 TCACTGTAAACCCCG GCGATAAG CTC CTT-TCGC TTTTTCTCATTGCTA TERM 1182 1112627 - 1112648 + g 70 -10.1 -3.05022 | TTCTTCCCATCCTCT GCACCAGAG AATC CGCTGGTGC TATATCTGTAAGCAG Tpet_1085 1115104 - 1114322 - | CRISPR-associated Cas5 family protein Tpet_1086 1116099 - 1115101 - | CRISPR-associated autoregulator DevR family protein protein Tpet_1087 1117285 - 1116092 - | hypothetical protein TERM 1183 1117059 - 1117072 + g 75 -6.7 -4.45083 | opp_overlap 1117049 AAGCATCTTTCTGAG CCAGA CAAA TCTGG TTTTCTGAATATGGA TERM 1184 1117186 - 1117202 + g 71 -3.7 -4.85129 | opp_overlap 1117178, overlap 1117178 CATCAAACTTCGACA GAAGTTC CTT GGATTTC TTTTTGATCTGTGGT TERM 1185 1117615 - 1117581 - R 73 -2.9 -5.06103 | gap 1, opp_overlap 1117595, overlap 1117590 ATAACTTTCAAAAAA CCATAGACATTGGCGT TGTG AAGCCAAC-TCTGTGG ATATATGACTATCGC Tpet_1088 1118349 - 1117624 - | CRISPR-associated Cas family protein TERM 1186 1118156 - 1118127 - G 100 -10.8 -6.0458 | opp_overlap 1118125 1118146 AGAAATTAAAAAAAA CAGGAGACTCAA ACATAA TGGAGTCTCCTG AGATTTCCTTTATTC Tpet_1089 1119282 - 1119632 + | heat shock protein DnaJ domain-containing protein Tpet_1090 1119623 - 1120093 + | hypothetical protein TERM 1187 1120689 - 1120677 - g 85 -3.3 -5.5208 | GGATAAGAGAAAAAA CGTGT TCA ACCCG CTCGTCAAGAAATAC Tpet_1091 1120093 - 1120908 + | hypothetical protein Tpet_1092 1121465 - 1120890 - | hypothetical protein TERM 1188 1121162 - 1121181 + gT 72 -9.4 -3.25204 | overlap 1121161 ACACCCCGGGTGAGT CGAAAAGA TCTC TCTTTTCG TATATTTCGACGTAG Tpet_1093 1122577 - 1121438 - | CRISPR-associated RAMP Csm5 family protein TERM 1189 1122294 - 1122308 + gr 73 -4.2 -4.88293 | overlap 1122297 GGATGGTGAACAACT TCAGGA ATC TCCGGA TTTCTTTTTCCACTT Tpet_1094 1123431 - 1122574 - | CRISPR-associated RAMP Csm4 family protein TERM 1190 1123403 - 1123362 - G 70 -10.2 -2.53876 | gap 2 TGGTATCGGAATGGA TGGTGGGGAGGGTGGAATCG GTCT CG-TTCC-CCCTACCCACCC TGAAACCACTTCTGA Tpet_1095 1124192 - 1123449 - | CRISPR-associated RAMP Csm3 family protein Tpet_1096 1124628 - 1124206 - | CRISPR-associated Csm2 family protein Tpet_1097 1126850 - 1124643 - | metal dependent phosphohydrolase TERM 1191 1125730 - 1125740 + g 76 -4 -4.99947 | AGGTCTTTTTCCGTG TACA TTC TGTA TTTTCTTTCGTTCAA TERM 1192 1126567 - 1126579 + g 76 -7.7 -4.35958 | overlap 1126566 AGTTCTTCAAACTTC TGACC TTC GGTCA TTCTTTCTTTGCTCG TERM 1193 1126632 - 1126642 + g 83 -4 -5.40474 | GTACCAAACCTTTTC GTTT TCC AAAC TTTTTTTCAGAAGAT Tpet_1098 1128493 - 1126847 - | hypothetical protein TERM 1194 1127832 - 1127845 + g 72 -3.1 -5.07107 | opp_overlap 1127832 TTTTGAGACATAGAA CCAAG TAGC TTTGG TTTTTTCGAACTTTG Tpet_1099 1129250 - 1128498 - | CRISPR-associated Cas family protein TERM 1195 1129282 - 1129295 + H 70 -2.5 -4.9138 | opp_overlap 1129282, overlap 1129277 ATGTCTTTGTGATAA TTTTA TCAT TAAAA TTTTCTTTGCATACT Tpet_1100 1129533 - 1129952 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpet_1101 1129967 - 1130341 + | dinitrogenase iron-molybdenum cofactor biosynthesis protein TERM 1196 1130350 - 1130367 + T 100 -12.7 -4.93968 | opp_overlap 1130350 TCACTGAAAAACAAA GAGGGGC TTTG GCCCCTC TTTTTCATTCTAGAT TERM 1197 1130367 - 1130350 - T 100 -12.7 -4.89063 | opp_overlap 1130350 TCACTGAAAAACAAA GAGGGGC TTTG GCCCCTC TTTTTCATTCTAGAT Tpet_1102 1132969 - 1130372 - | valyl-tRNA synthetase TERM 1198 1132565 - 1132577 + g 83 -9.1 -4.27297 | TGTCCAGTCCACCGA GGCTC CAA GAGCC TTTATCTGTTCTCTT Tpet_1103 1133501 - 1133001 - | chromate transporter TERM 1199 1133477 - 1133467 - G 75 -3.2 -5.26247 | overlap 1133462 1133471 CCAAAAGAAAGAAAA CCGA CCT TCAG AAAGATGAAGGCGAG Tpet_1104 1134020 - 1133505 - | chromate transporter TERM 1200 1134014 - 1133999 - G 82 -7.6 -4.65078 | AGATCCTCAAGAAAA GGAAGA ACAG TCTTCC AATCAAATTCGATCC TERM 1201 1134448 - 1134428 - g 72 -8.2 -3.69395 | GGGAGTACGGAAGAA CCCTCGTG GAGCT CTCGAGGG ATCCGATATTCGAAG TERM 1202 1134764 - 1134754 - g 91 -6.8 -5.49234 | opp_overlap 1134753 ATAGGGAACAAAAAA GCGA TCC TCGC GCTTTCTGGAGGGGT guaA 1134133 - 1135638 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1203 1135708 - 1135691 - g 78 -6.3 -4.59414 | gap 1 CGAGAAGAAGCAAAA CCGCTCGT TGA AC-AGCGG TTCGAAGAGTTCAAA TERM 1204 1135761 - 1135743 - g 86 -11.8 -3.53444 | opp_overlap 1135739, overlap 1135739 TGGGCGAAGAAGGAA CAGAAGAG GAT CTCTTCTG TGAACTCTCTTTCTG Tpet_1106 1135643 - 1136266 + | N-glycosylase/DNA lyase Tpet_1107 1136278 - 1137204 + | HflK protein TERM 1205 1137471 - 1137451 - g 73 -4.6 -4.77165 | opp_overlap 1137451 1137455, overlap 1137446 CCGCCGACAAGAAAA CGCTCGTG ATAGA CACGTACG TTCTCTGGAGGATAA TERM 1206 1137542 - 1137510 - g 77 -6.9 -4.386 | opp_overlap 1137520, overlap 1137514 1137518 GAAGCGTTCATAAAA TCACTGAAGAGCGTG AAG CTCGCTCTTCCAAGA ATCGACGATGTGGTT Tpet_1108 1137201 - 1138052 + | HflC protein TERM 1207 1138080 - 1138037 - T 95 -13.4 -3.41569 | opp_overlap 1138045 1138046, overlap 1138038 1138045 CGATGCACTGAAATA CCTCAAAACGAAGTAAGGGA GAGT TCCCTCACTTCATTTTCAGA AAGTTACTCACGCTG TERM 1208 1138079 - 1138038 - T 89 -14.7 -2.6462 | opp_overlap 1138045 1138046, overlap 1138037 1138045 GATGCACTGAAATAC CTCAAAACGAAGTAAGGGA GAGT TCCCTCACTTCATTTTCAG AAAGTTACTCACGCT TERM 1209 1138072 - 1138045 - T 93 -11.4 -4.21827 | opp_overlap 1138045 1138046, overlap 1138038 1138037 TGAAATACCTCAAAA CGAAGTAAGGGA GAGT TCCCTCACTTCA TTTTCAGAAAGTTAC TERM 1210 1138045 - 1138072 + T 70 -7 -4.09739 | opp_overlap 1138045 1138038 1138037, overlap 1138046 TGAAATACCTCAAAA CGAAGTAAGGGA GAGT TCCCTCACTTCA TTTTCAGAAAGTTAC TERM 1211 1138046 - 1138071 + T 73 -10.5 -3.05522 | opp_overlap 1138045 1138038 1138037, overlap 1138045 GAAATACCTCAAAAC GAAGTAAGGGA GAGT TCCCTCACTTC ATTTTCAGAAAGTTA Tpet_1109 1138874 - 1138065 - | hypothetical protein Tpet_1110 1139346 - 1138849 - | riboflavin synthase Tpet_1111 1140509 - 1139343 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 1212 1140453 - 1140473 + gr 72 -6.1 -4.2828 | overlap 1140454 TTCGTTCTCTCTGTT TCTGTCGAT CAA AACGACAGG TTTTCCTCCCTCAAA Tpet_1112 1141032 - 1140484 - | riboflavin synthase subunit alpha Tpet_1113 1142087 - 1141041 - | riboflavin biosynthesis protein RibD TERM 1213 1142132 - 1142115 - R 100 -12.7 -5.07652 | opp_overlap 1142114 CTGTGTAAAAGAAAA GGGACCC TCTC GGGTCCC ATATAATCTCCACAT Tpet_1114 1142653 - 1142336 - | diguanylate cyclase TERM 1214 1142600 - 1142624 + g 83 -10.8 -3.74361 | gap 1 AATCACTTGACCTCC TCCCAATCCCC TGAA GGGGA-TGGGA TTCTTGGTGGCTCTC Tpet_1115 1143846 - 1142638 - | IS605 family transposase OrfB TERM 1215 1143109 - 1143125 + g 80 -6.5 -4.88918 | overlap 1143105 GTTGATCTGGTTTCT GAGCCGT CTC AGGGCTC TTTTCTTTGCACTAA Tpet_1116 1144715 - 1143831 - | putative metal dependent phosphohydrolase TERM 1216 1144496 - 1144512 + g 89 -5.1 -5.72616 | CCTCAAAGGCTTCTT CGTTGAA TTC TTCATCG TTTTTTTCTATCGCT Tpet_1117 1144919 - 1144737 - | hypothetical protein Tpet_1118 1145242 - 1144970 - | hypothetical protein Tpet_1119 1145960 - 1145247 - | hypothetical protein Tpet_1120 1146023 - 1147180 + | hypothetical protein Tpet_1121 1147167 - 1147427 + | FlhB domain-containing protein TERM 1217 1147431 - 1147454 + F 100 -16.8 -2.94099 | opp_overlap 1147431, overlap 1147433 TACGACAAATGAAAA GAGGTCCCCA GAGG TGGGGACCTC TGTGTGGTCGGGGCG TERM 1218 1147454 - 1147431 - f 100 -16.8 -4.63479 | opp_overlap 1147431 1147433 TACGACAAATGAAAA GAGGTCCCCA GAGG TGGGGACCTC TGTGTGGTCGGGGCG TERM 1219 1147433 - 1147452 + F 87 -13.6 -3.02471 | opp_overlap 1147431, overlap 1147431 CGACAAATGAAAAGA GGTCCCCA GAGG TGGGGACC TCTGTGTGGTCGGGG TERM 1220 1147796 - 1147818 + F 100 -12 -5.48213 | opp_overlap 1147798, overlap 1147798 1147805 AATAGCAGAAGTGTA AAGGGATGCC AAA GGCATCCCTG TTTTTGTTTTAACTG TERM 1221 1147816 - 1147798 - f 100 -14.6 -3.70068 | opp_overlap 1147796 1147798 1147805 TAGCAGAAGTGTAAA GGGATGCC AAA GGCATCCC TGTTTTTGTTTTAAC TERM 1222 1147798 - 1147816 + F 100 -14.6 -4.3613 | opp_overlap 1147798, overlap 1147796 1147805 TAGCAGAAGTGTAAA GGGATGCC AAA GGCATCCC TGTTTTTGTTTTAAC TERM 1223 1147979 - 1147989 + F 84 -6.8 -5.0538 | CCTGTTTGATCTTCT CAGC AGT GCTG TTTTTTGCAATAGCG Tpet_1122 1148082 - 1148537 + | hypothetical protein Tpet_1123 1149005 - 1148538 - | hypothetical protein TERM 1224 1148781 - 1148808 + g 100 -14.2 -4.0641 | opp_overlap 1148781 CTTTTCAAAAACAAA GAGCATCCCGAA ATCG TCCGGGATGCTC TTTCTGTACATCAAA TERM 1225 1148808 - 1148781 - G 100 -16.4 -4.85782 | opp_overlap 1148781 CTTTTCAAAAACAAA GAGCATCCCGAA ATCG TCCGGGATGCTC TTTCTGTACATCAAA Tpet_1124 1150348 - 1149014 - | xylose isomerase TERM 1226 1150703 - 1150686 - g 74 -5.5 -4.66609 | GATTCCAGGGAAAAA CAGAGAG AAAA CGCTCTG GATCGTAACTCACAT Tpet_1125 1150453 - 1151643 + | succinyl-diaminopimelate desuccinylase Tpet_1126 1151649 - 1152200 + | histidine kinase Tpet_1127 1152193 - 1152825 + | methyltransferase small TERM 1227 1153211 - 1153187 - g 76 -9.3 -3.66908 | GGTCTCGAAAAGGAA GACCCGCTGAA CCT TTCAGGAGGTC AGAAACAGAGACTCG Tpet_1128 1152806 - 1153567 + | ABC transporter related Tpet_1129 1153545 - 1154288 + | stationary-phase survival protein SurE Tpet_1130 1154288 - 1154782 + | peptide deformylase TERM 1228 1155507 - 1155523 + G 79 -9.5 -3.66874 | opp_overlap 1155482 1155509, overlap 1155515 CTTTTGGAAGGTGAA GAGATCT ATC AGATCTC TTTCGATCAGATTCC TERM 1229 1155679 - 1155663 - g 72 -6.6 -4.23707 | opp_overlap 1155672 ATAAAGGTGAACAAA TTTCCC GAATT GGGAAA AGCCCCAGATTTTGC Tpet_1131 1154796 - 1155767 + | peptidase M23B TERM 1230 1156008 - 1155979 - g 73 -7.9 -4.07885 | overlap 1155980 TATGTGGGTTCAAAA TGTCCCAACAAGA TACA TCTTGTTGCGACC TTCACGTCTTCTTAT TERM 1231 1156007 - 1155980 - g 75 -11.4 -3.04517 | overlap 1155979 ATGTGGGTTCAAAAT GTCCCAACAAGA TACA TCTTGTTGCGAC CTTCACGTCTTCTTA Tpet_1132 1155772 - 1156098 + | hypothetical protein Tpet_1133 1156172 - 1157359 + | S-adenosylmethionine synthetase Tpet_1134 1157375 - 1157665 + | ribosomal protein S20 Tpet_1135 1157734 - 1158396 + | hypothetical protein TERM 1232 1158941 - 1158931 - g 82 -5.4 -5.1287 | opp_overlap 1158931 GTGAGAGGGAAAAAA GTGA ACC TCAC TCCTCTCGAATTTGA Tpet_1136 1158457 - 1159176 + | two component transcriptional regulator TERM 1233 1159290 - 1159315 + G 77 -6.9 -4.45168 | gap 1, opp_overlap 1159289, overlap 1159292 1159293 AAAGCTGTCAGATAT GCTGGGGGAA AAGGACG TTCCCCC-GC TTTATCTTTTCGAGA Tpet_1137 1159180 - 1160418 + | PAS/PAC sensor signal transduction histidine kinase TERM 1234 1161000 - 1160987 - g 75 -3.1 -5.19212 | gap 1, overlap 1160988 ATCATGAGTAAAAAA CTCGCC GGT GG-GAG CGATGCTTTTGTTCT TERM 1235 1161542 - 1161530 - g 76 -7.7 -4.34486 | AGGAAGAAGAAAGAA GATCG AAT CGATC ACAGAGTTGGAATCA Tpet_1138 1160423 - 1161727 + | pyrimidine-nucleoside phosphorylase TERM 1236 1162783 - 1162767 - g 79 -8.7 -4.2528 | overlap 1162780 CGTGAAGGGAATAAA CACCCTC GGA GAAGGTG AAGTCCTCGTTTACA Tpet_1139 1161724 - 1163385 + | hypothetical protein TERM 1237 1163773 - 1163745 - g 81 -4.7 -5.23316 | gap 1, overlap 1163737 1163746 GACGAGATGAAAAAA CCCATCATGGTT TTCGTC AACCA-GATGGA TAAAGAGAGGGCCAA TERM 1238 1164693 - 1164705 + G 70 -9.1 -3.30443 | GTCGTTTCTGGTCTT GGTGC GAT GCACC TTGATGTCATGATAG Tpet_1140 1163385 - 1165436 + | translation elongation factor G TERM 1239 1165580 - 1165543 - g 100 -15.1 -3.81137 | gap 1, opp_overlap 1165547, overlap 1165544 CTTGAAAGACTCAAA GGAATGGGCATCAA-CAC AGT GTGGTTGATGCCCATTCA TCCTACTGGAATGGT TERM 1240 1165579 - 1165544 - g 100 -18.6 -2.882 | gap 1, opp_overlap 1165547, overlap 1165543 TTGAAAGACTCAAAG GAATGGGCATCAA-CAC AGT GTGGTTGATGCCCATTC ATCCTACTGGAATGG TERM 1241 1165547 - 1165576 + G 90 -14.5 -3.23216 | gap 1, opp_overlap 1165544 1165543 AAAGACTCAAAGGAA TGGGCATCAA-CAC AGT GTGGTTGATGCCCA TTCATCCTACTGGAA TERM 1242 1165798 - 1165779 - g 72 -9.3 -3.57185 | overlap 1165777 CTTAGTCAAAGAACA CCCTGAG TGGTTT CTCAGGG ATGAAAATGGAAATC Tpet_1141 1165438 - 1166706 + | alpha amylase, catalytic region Tpet_1142 1166721 - 1167002 + | hypothetical protein TERM 1243 1167455 - 1167477 + G 79 -9.2 -4.07568 | opp_overlap 1167455 GATCGCTTTCAGGAA CCTGGAGGAA GGA TTCTTTCAGG TTTTGAAAAACAAGA Tpet_1143 1167003 - 1167599 + | metal dependent phosphohydrolase TERM 1244 1167755 - 1167775 + G 75 -6.1 -4.42062 | TGAGAATAGACGATT CGAAGAGGA TGG TCTTCGTCG TTTCTTTCCCAAGTG TERM 1245 1168001 - 1168018 + G 70 -4.9 -4.41047 | opp_overlap 1168001 TCTCTAAAAGAAAGC TGAAGTT CTTC GACTTCA TTTTCGTTGGAAGCT Tpet_1144 1167583 - 1168239 + | hypothetical protein Tpet_1145 1168236 - 1168694 + | hypothetical protein Tpet_1146 1169506 - 1168685 - | nicotinate-nucleotide pyrophosphorylase Tpet_1147 1170407 - 1169511 - | quinolinate synthetase TERM 1246 1169736 - 1169750 + g 76 -8.6 -4.06148 | opp_overlap 1169736, overlap 1169736 TGTTCCAATCACAAA GATCCT GGA AGGATC TTTCTCTGGGATCTT TERM 1247 1169750 - 1169736 - G 76 -8.6 -4.05446 | opp_overlap 1169736 1169736 TGTTCCAATCACAAA GATCCT GGA AGGATC TTTCTCTGGGATCTT Tpet_1148 1171145 - 1170420 - | L-aspartate dehydrogenase TERM 1248 1172320 - 1172349 + r 70 -2.9 -5.01732 | opp_overlap 1172330, overlap 1172314 GCTAGGGCTTTGACG GTTTCAATAATTC CTTA GAGGTATGGAAAC TTTTTTCGGGGGCTT TERM 1249 1172693 - 1172720 + r 100 -10.6 -5.21236 | opp_overlap 1172695 1172697, overlap 1172697 GGGTTATAAAATAAA AAGAGCAGGGGA AAAT TCCCCTGCTTTC TTTTTCTTGTAGATT TERM 1250 1172718 - 1172695 - R 100 -11 -5.54907 | opp_overlap 1172693 1172697, overlap 1172697 GTTATAAAATAAAAA GAGCAGGGGA AAAT TCCCCTGCTT TCTTTTTCTTGTAGA TERM 1251 1172716 - 1172697 - R 100 -13.6 -4.39746 | opp_overlap 1172697 1172693, overlap 1172695 TATAAAATAAAAAGA GCAGGGGA AAAT TCCCCTGC TTTCTTTTTCTTGTA TERM 1252 1172697 - 1172716 + r 100 -13.6 -5.09221 | opp_overlap 1172695 1172697, overlap 1172693 TATAAAATAAAAAGA GCAGGGGA AAAT TCCCCTGC TTTCTTTTTCTTGTA pyrB 1174321 - 1172738 - | bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit TERM 1253 1174370 - 1174349 - R 100 -8.7 -5.71712 | opp_overlap 1174351 1174362, overlap 1174351 CTTCAGACAAAAAAA TATCGCACC TAAC GGTGCGATT TTTCTACAGAATATT TERM 1254 1174368 - 1174351 - R 100 -11.3 -4.50122 | opp_overlap 1174351 1174362, overlap 1174349 TCAGACAAAAAAATA TCGCACC TAAC GGTGCGA TTTTTCTACAGAATA TERM 1255 1174351 - 1174368 + r 100 -11.3 -4.83615 | opp_overlap 1174349 1174351, overlap 1174362 TCAGACAAAAAAATA TCGCACC TAAC GGTGCGA TTTTTCTACAGAATA Tpet_1150 1174866 - 1174357 - | dihydrofolate reductase-like protein Tpet_1151 1176260 - 1174854 - | putative oxidoreductase TERM 1256 1175528 - 1175549 + g 70 -9.5 -3.01791 | CGTTCAGATTCGTTC CCGGAATTC CCAT GAATTTCGG TGTTCCCGCACCGGT TERM 1257 1175829 - 1175841 + g 74 -3.3 -5.00616 | ACCTGAACCAACGAC GGCGA CTT TCTCC TTTTTTGACCCGGCC TERM 1258 1176219 - 1176244 + g 81 -3.3 -5.36364 | overlap 1176220 GTTCCTTCTCCTCGA TTCCGGTGA TTGTTCCT TCATCGGAG TTTTTCTGTTTTTCA Tpet_1152 1177090 - 1176257 - | ferredoxin--NADP(+) reductase subunit alpha TERM 1259 1176844 - 1176859 + g 72 -3.2 -5.00616 | overlap 1176819 GTCCCACCACATCGA GAATGG TGTC CCCTTC TTTTTTCAGAGAAAG Tpet_1153 1177694 - 1177074 - | ABC transporter related Tpet_1154 1178335 - 1177712 - | hypothetical protein Tpet_1155 1180886 - 1178328 - | SMC domain-containing protein TERM 1260 1179904 - 1179919 + g 89 -9 -4.67048 | overlap 1179916 AGCTTGGAAAGTCTT TCCCTG TGAA CAGGGA TTTCTTTTGAGATCG TERM 1261 1180109 - 1180130 + g 76 -5.1 -4.85782 | gap 1, opp_overlap 1180115 ATTCGTTCTTTCTCA GAGAGAGCGC CTT GAGC-CTCTC TTTCTTTTTCACGAG TERM 1262 1180347 - 1180361 + g 78 -6.4 -4.66264 | CTCCAACTTTTTCAT CTTCTC TTT GAGGAG TTTTTCCAGCTTTTC TERM 1263 1180429 - 1180400 - G 79 -9.4 -4.07568 | opp_overlap 1180403 CTTTGCTTTGGAAAA CATCGGAGATGA TCTCGG TGATCTCCGATG GAGGAGAAGTCAAAA Tpet_1156 1182024 - 1180876 - | nuclease SbcCD, D subunit TERM 1264 1181562 - 1181587 + g 81 -4.7 -5.24531 | TGTTGAGTCTGGATT CGAGGAAGA ACCGGAAG TCTCCCTCG TTTTTTCTCAAAGCT Tpet_1157 1182412 - 1182026 - | hypothetical protein TERM 1265 1182127 - 1182111 - G 72 -5.9 -4.41353 | TCAGAGAGATTAAAA GCTTTCT CAA AGAAAAC AAGGGCTTCTCCATA Tpet_1158 1184679 - 1182409 - | ATP-dependent protease La TERM 1266 1182579 - 1182591 + g 72 -9.1 -3.65542 | overlap 1182577 ATTTCTCTCTTATCC CTCCC ACC GGGAG TATTTTACCCCTCAA TERM 1267 1183590 - 1183607 + g 77 -11.3 -3.28712 | TTCCGAACTTTCTTC CCATCGC TTCT GCGATGG TTCTGCCCAGCGACG TERM 1268 1184081 - 1184093 + g 79 -7.7 -4.42062 | ATTTCTTCTTCTATC TCGAG AAT CTCGA TTTCTTTCACCAGTA TERM 1269 1184119 - 1184157 + g 86 -13.4 -3.2981 | gap 1, opp_overlap 1184118 CAGTATTGAGAGTAT CTTCTCGAGACG-TTCA AGAGGA TGAATCGTCTCGAGGAG TTCCTGCTTCGTCTC TERM 1270 1184322 - 1184333 + g 73 -2.2 -5.14985 | TTCTCATAAGTGCTT CGAG TTTC TTCG TTTTTCTGTATTTCA Tpet_1159 1185211 - 1184726 - | hypothetical protein TERM 1271 1185016 - 1185039 + g 75 -3.2 -5.14563 | gap 1, overlap 1185017 GATAAACGTTCATGA GGGTGAA-AGT TGG ACTCTTCACCA TTTTTTCATCGAGAC TERM 1272 1185141 - 1185153 + g 78 -6.3 -4.62904 | TCTCCGCCCTTGAGA TTCTC AGT GAGAA TTTTTGCGAGTCTTT Tpet_1160 1185274 - 1186059 + | hypothetical protein Tpet_1161 1186056 - 1186358 + | hypothetical protein TERM 1273 1187539 - 1187509 - g 78 -4.9 -5.08601 | gap 2, overlap 1187513 1187514 CGATGGTAAGAAAAA GAAT-C-CCACCTTC ATT GAAGATGGAGCATTC ATAGGAAGCAACTCA Tpet_1162 1186370 - 1187707 + | UDP-N-acetylglucosamine pyrophosphorylase Tpet_1163 1187709 - 1188656 + | ribose-phosphate pyrophosphokinase Tpet_1164 1188687 - 1189331 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 1274 1189343 - 1189369 + G 77 -10.8 -3.41878 | opp_overlap 1189362, overlap 1189364 ATAACGCATGGTTGT CGTTGGTCTGGG GAA TCCAGGCCCACG TTATGCCTTCACCCG TERM 1275 1189398 - 1189362 - g 73 -10.9 -2.52464 | opp_overlap 1189343 1189364 GGTCTGGGGAATCCA GGCCCACGTTATGCC TTCACCC GGCATAACGTGGGTT TTCTGTTTCTGGACT TERM 1276 1189364 - 1189396 + G 100 -17.9 -4.84918 | opp_overlap 1189362, overlap 1189343 TCTGGGGAATCCAGG CCCACGTTATGCC TTCACCC GGCATAACGTGGG TTTTCTGTTTCTGGA Tpet_1165 1189335 - 1189895 + | peptidyl-tRNA hydrolase TERM 1277 1190202 - 1190184 - g 76 -2.4 -5.43974 | overlap 1190187 AAAATGAAAGAAAAA TCACTTTC CTC GAAAGAAA ATTAAATGAGGCGAT Tpet_1166 1189892 - 1190293 + | UvrB/UvrC protein TERM 1278 1190315 - 1190291 - T 91 -9.4 -4.59591 | gap 1, opp_overlap 1190296, overlap 1190296 AACAAAACAGTAAAA TGAAA-GCCCC CGAA GGGGCTTTTCA TCGTTTCAAATAATC TERM 1279 1190296 - 1190309 + T 86 -9.5 -4.39386 | opp_overlap 1190291 1190296 AACAGTAAAATGAAA GCCCC CGAA GGGGC TTTTCATCGTTTCAA TERM 1280 1190309 - 1190296 - T 84 -9.5 -4.26292 | opp_overlap 1190296, overlap 1190291 AACAGTAAAATGAAA GCCCC CGAA GGGGC TTTTCATCGTTTCAA Tpet_1167 1192673 - 1190313 - | glycoside hydrolase family protein TERM 1281 1190883 - 1190849 - G 71 -10.6 -2.60075 | opp_overlap 1190860, overlap 1190848 1190870 GCCTCTTGAAGTAAT CGACTGCGGACCAGCT GAA AACCGGCCAGCTGTCG TTGAGCTGCCAGAAG TERM 1282 1193975 - 1193989 + G 73 -10 -3.47029 | opp_overlap 1193983 GAGAGATACTGGAAG CGTACG AAC CGTACG TTGATCTTTCGATCA Tpet_1168 1192771 - 1194588 + | GTP-binding protein LepA Tpet_1169 1194585 - 1195049 + | hypothetical protein Tpet_1170 1195046 - 1195714 + | glycerophosphoryl diester phosphodiesterase Tpet_1171 1195721 - 1196086 + | alkylhydroperoxidase TERM 1283 1196093 - 1196111 + G 74 -10.3 -3.23572 | opp_overlap 1196092 1196109, overlap 1196091 TCTCTTTGATGGAAC CGCTCTG GCTTA CAGAGCG TATTATGCGCTCGAT TERM 1284 1196180 - 1196162 - g 71 -7.4 -3.87815 | CGGCATTCCCACAAA CGCCAC GTACGGT GTGGCG AGGATGCTGGTGAGA TERM 1285 1197197 - 1197181 - g 80 -6.5 -4.75954 | AAAAGCTAAAAGAAA TCCTGGA GGA TCCTGGA GCAAAGATCGTTGGT TERM 1286 1197387 - 1197367 - g 74 -6.9 -4.36914 | opp_overlap 1197365 1197367 TTCTCGGTTACAAAA TGACTTCCT ACC AGGAACTCA TGTCTTTCTCCTCAC Tpet_1172 1196064 - 1198745 + | DNA polymerase I Tpet_1173 1198759 - 1199226 + | CheC domain-containing protein TERM 1287 1199297 - 1199270 - f 82 -10 -3.95435 | opp_overlap 1199270 1199272, overlap 1199267 CTTTGGAAAATACAA CATAGTCGTTAT GTTC ATAACGACTCTG GCTTCGAACATCGTT TERM 1288 1199726 - 1199737 + G 70 -2.2 -5.04868 | TTGTGTCTTTTGAAA CTCT TCTG GGAG TTTTCTTTGGTTTGA Tpet_1174 1199449 - 1199799 + | hypothetical protein TERM 1289 1199834 - 1199820 - g 90 -7.2 -5.40474 | opp_overlap 1199819 ACGTTTTCAAAAAAA GAGAAA ATA TTTCTC GCTGTCTTCATTTCC Tpet_1175 1199796 - 1200638 + | F0F1 ATP synthase subunit A Tpet_1176 1200652 - 1200909 + | F0F1 ATP synthase subunit C TERM 1290 1201401 - 1201389 - g 73 -7.7 -4.08945 | AGTATCTCGTCAAAA TCCTC AAA GAGGA GATAGAAAAGTCATG Tpet_1177 1200923 - 1201417 + | ATP synthase F0, B subunit Tpet_1178 1201414 - 1201965 + | F0F1 ATP synthase subunit delta TERM 1291 1202228 - 1202214 - g 73 -4.2 -4.76423 | TACAAAGATATAAAA GAGGGT CAC ACCGTC AGAAGATTGAAAAGG TERM 1292 1202449 - 1202397 - g 77 -12 -2.8806 | AAACCCGTCGATACA CCTCTCCAGACAGGAATAAAGGCG ATCGA CTCCATGATTCCCATCGGGAGAGG CCAAAGAGAGCTGAT Tpet_1179 1201962 - 1203473 + | F0F1 ATP synthase subunit alpha TERM 1293 1203573 - 1203547 - g 74 -10.9 -2.77999 | overlap 1203544 1203542 CACTGATGAAGATCA CGCGCGCTA TGGAGATGG TAGCGCGCG CAAAGGTGAGAAAAA Tpet_1180 1203480 - 1204316 + | ATP synthase F1, gamma subunit TERM 1294 1204743 - 1204782 + G 71 -7.2 -4.15044 | gap 1, overlap 1204744 CCGGTATAAAGGTGA TCGATCTTCTCGCTCCGTT CCC AAAGG-GCGGAAAGATCGG TTTCTTCGGAGGAGC Tpet_1181 1204328 - 1205734 + | F0F1 ATP synthase subunit beta TERM 1295 1205854 - 1205820 - g 73 -11.4 -2.72558 | overlap 1205809 AGAACGGTGGAAGGA TCCATGGGAATCCTCC CCA GGAGGGCTCCCATAGT AACCCAGCTCTCCGT TERM 1296 1205906 - 1205926 + G 77 -3.9 -5.21709 | GGGTGATGATGAATA CCATCTGAA AGT TGCGGGTGG TTTTTTGCTCTGCGA Tpet_1182 1205739 - 1206065 + | F0F1 ATP synthase subunit epsilon TERM 1297 1206227 - 1206251 + F 74 -10.7 -2.80988 | opp_overlap 1206222, overlap 1206224 TTCAGAACAGCCGTC CCCTCTCCGCT TGA AATGGAGAGGG TGCTTCGTGATATAA TERM 1298 1206294 - 1206321 + G 80 -5.6 -4.95758 | gap 1 GTACCCGTATATACT GCGTTCATCTATC TTC GA-AGCTGAGCGC TTTTTATAATGTGAT Tpet_1183 1206242 - 1206595 + | DegV family protein Tpet_1184 1206577 - 1206879 + | hypothetical protein Tpet_1185 1206893 - 1207429 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 1299 1207511 - 1207525 + G 79 -4.2 -5.15634 | GTAATGGACGATGGT GAACTC GAA GAGATC TTTTTTGATGAGATA Tpet_1186 1207499 - 1208863 + | ribonuclease tsf 1208865 - 1209464 + | elongation factor Ts TERM 1300 1209508 - 1209482 - f 88 -10.9 -4.23853 | opp_overlap 1209485, overlap 1209485 AACAATACACATAAA CAAGGGTGAGC GAAAG GCTCACCCTTT TTTTGGAGGTATGGA TERM 1301 1209485 - 1209505 + F 100 -12.6 -5.42862 | opp_overlap 1209482 1209485 AATACACATAAACAA GGGTGAGC GAAAG GCTCACCC TTTTTTTGGAGGTAT TERM 1302 1209505 - 1209485 - f 100 -12.6 -4.21184 | opp_overlap 1209485, overlap 1209482 AATACACATAAACAA GGGTGAGC GAAAG GCTCACCC TTTTTTTGGAGGTAT Tpet_1188 1209526 - 1210221 + | uridylate kinase Tpet_1189 1211486 - 1210218 - | major facilitator transporter TERM 1303 1210283 - 1210318 + g 100 -11.9 -5.04601 | opp_overlap 1210270 1210281, overlap 1210284 CACCGGCAAACATTG CCATCGCGGAGATCC ATGCGA GGGTTTCCGCGATGC TTTTTCCTTTCTCCA TERM 1304 1210284 - 1210317 + g 100 -15.4 -3.61676 | opp_overlap 1210270 1210281, overlap 1210283 ACCGGCAAACATTGC CATCGCGGAGATCC ATGCGA GGGTTTCCGCGATG CTTTTTCCTTTCTCC TERM 1305 1210809 - 1210820 + g 76 -2.2 -5.41143 | CAAAAGAGCCAGGAT GGGA ACTT TCTC TTTTTTTGGAAGCTC Tpet_1190 1212011 - 1211490 - | 3H domain-containing protein Tpet_1191 1213687 - 1212032 - | radical SAM domain-containing protein TERM 1306 1213128 - 1213116 - G 73 -4.1 -4.82901 | opp_overlap 1213116 GGCTCTGTACAAAAA GAACA GAA CGTTC TTCTTTCACAACCCC Tpet_1192 1214451 - 1213684 - | hypothetical protein Tpet_1193 1214809 - 1214456 - | hypothetical protein Tpet_1194 1215368 - 1214799 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1307 1215398 - 1215412 + r 74 -10 -3.17219 | CGTATTAAGACTTTC CCCTCA AAT TGAGGG TTCATACACCTTCTC Tpet_1195 1216462 - 1215401 - | alanine racemase domain-containing protein TERM 1308 1216370 - 1216338 - G 79 -9.2 -4.07687 | gap 1, opp_overlap 1216359 AGCGTTTCCGCAAAA CGGGGATCACCAAGG GTTA CCTTGGTAA-CACCG ACTATTTCTATACCT Tpet_1196 1216515 - 1217312 + | purine nucleoside phosphorylase TERM 1309 1218165 - 1218191 + GF 73 -9.3 -3.53012 | GAGCTTGGAGGAGGA GGGCACCCGCG AGCGG CGGGGGTGACC TTTGAGGGGGAGAAA Tpet_1197 1217313 - 1218314 + | phosphoesterase domain-containing protein TERM 1310 1221058 - 1221041 - gf 72 -7.1 -4.0371 | opp_overlap 1221040 1221030 1221043 TAGGCTTCATAGAAA CAGAAAA GGAA TTTTCTG ATATGATGGAGTTTG TERM 1311 1221162 - 1221174 + GF 75 -2.7 -5.15969 | opp_overlap 1221168, overlap 1221163 CGAGAGGGGCGAAAT TCAAA ATT TTTGG TTTTTTCAATTCGAA Tpet_1198 1218277 - 1221192 + | TPR repeat-containing protein TERM 1312 1221878 - 1221860 - g 100 -11.7 -4.56978 | TCTTGAAACAATAAA GAGGGCC GATGA GGCCCTC TACCTGGCAAAGACT TERM 1313 1221920 - 1221905 - g 82 -7.6 -4.57073 | GACTCTTGGCAAAAA CTCTGT GGTC ACAGAG AAAGTACTTTCTCGA Tpet_1199 1221171 - 1221947 + | diguanylate cyclase Tpet_1200 1222656 - 1221913 - | cobyrinic acid a,c-diamide synthase rplT 1223023 - 1222667 - | 50S ribosomal protein L20 Tpet_1202 1223234 - 1223037 - | ribosomal protein L35 infC 1223701 - 1223249 - | translation initiation factor IF-3 TERM 1314 1223810 - 1223790 - R 95 -8.2 -5.34555 | overlap 1223792 1223804 1223805 TTACACTATAAAAAA TAGCGGGC AAAAA GCCCGCTT CCCCTCGAAGCTGAA TERM 1315 1223808 - 1223792 - R 90 -10.8 -4.30057 | overlap 1223790 1223804 1223805 ACACTATAAAAAATA GCGGGC AAAAA GCCCGC TTCCCCTCGAAGCTG TERM 1316 1224326 - 1224302 - R 100 -10.7 -5.45802 | TCTTTAAAACAAAAA GCCCGGTCAGT CAA AATGACCGAGC TGAAAATCCAGGTTT Tpet_1204 1225096 - 1224551 - | diguanylate cyclase TERM 1317 1224934 - 1224956 + g 72 -2.7 -5.08015 | overlap 1224931 CCAGATCGATGATGA GAAAGGAGA TGCCT TTTCCATTC TTTCTTTTTTGCCTT Tpet_1205 1225667 - 1225116 - | hypothetical protein TERM 1318 1225396 - 1225412 + g 78 -6.5 -4.59773 | opp_overlap 1225398, overlap 1225382 1225391 CGCTTCGCTTCCACA GAGAAGC TGT GCTGCTC TTTTTCACCCTCGAG TERM 1319 1225506 - 1225487 - G 83 -4.2 -5.28176 | opp_overlap 1225490 TCCATCCAGAAAAAA CGATTCCC TTTT GGAATTCG TCTTCGAAAAGAGTA TERM 1320 1225946 - 1225986 + G 70 -9.9 -3.11459 | gap 1, overlap 1225950 ACAGCACAGGGTTTT GGAACGTGCTGGATGG CTCGCTCACC CCATCCGG-ACGTTCC TTACATCATCGTCTT Tpet_1206 1225694 - 1226314 + | hypothetical protein TERM 1321 1226796 - 1226782 - g 79 -10 -3.74519 | AACACCGTGAGGAAA CACCTG TCG CAGGTG AAAGGTGGTCGATTC TERM 1322 1227142 - 1227110 - g 100 -17.1 -3.885 | ACGCGGAGATAATAA CCACTTCTCTGGACT GCG AGGCCAGAGAAGCGG GAAGGTTCATAGCGA Tpet_1207 1226293 - 1227546 + | hydroxypyruvate reductase Tpet_1208 1228144 - 1227536 - | phosphoribosyltransferase TERM 1323 1228058 - 1228035 - G 91 -8.2 -4.91511 | opp_overlap 1228035 1228038 ACTTCACGATAAAAA GAAGGTCC ATTTTTGA GGACCTTC TCTTCGCAGTTCTCA Tpet_1209 1229220 - 1228138 - | hypothetical protein Tpet_1210 1229676 - 1229233 - | hypothetical protein Tpet_1211 1230832 - 1229687 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 1324 1231222 - 1231243 + G 70 -2.3 -4.92239 | AGGAAATTCTGTTCC GAGTTTTGA AATT TTACAACTC TTTTTCAATTTTTGC TERM 1325 1231805 - 1231785 - g 93 -9.7 -4.56969 | AAGGTCATAAAGAAA GCCCTCG AGGAAAA CGAGGGC AATCGAAAGAAAGTG Tpet_1212 1230951 - 1231886 + | Fis family transcriptional regulator prfB 1232981 - 1231878 - | peptide chain release factor 2 secA 1235602 - 1232987 - | preprotein translocase subunit SecA TERM 1326 1235559 - 1235579 + g 79 -9.1 -4.02817 | TTTGAGACCATCTTC GCGTATTTT TTC AAAATGCGC TTGTTCTTATCGAAG Tpet_1215 1236830 - 1235604 - | hypothetical protein Tpet_1216 1237630 - 1236827 - | hemolysin A Tpet_1217 1238925 - 1237609 - | WD-40 repeat-containing protein TERM 1327 1238567 - 1238551 - G 70 -2.2 -4.95876 | overlap 1238538 AACGATAAGGAAAAA CTCATC GGGAA GCTGAG AGTCTGGAAAGATTT Tpet_1218 1239659 - 1238922 - | tRNA pseudouridine synthase A Tpet_1219 1239729 - 1241540 + | Pyrrolo-quinoline quinone Tpet_1220 1242457 - 1241537 - | signal peptidase I TERM 1328 1242277 - 1242299 + g 87 -10.6 -4.07687 | overlap 1242279 TCTCTCCTATCTGCG GTTCACGTAC AGT GTACGTGATC TTTTCGACGAAGAGT TERM 1329 1242279 - 1242297 + g 86 -11.8 -3.63744 | overlap 1242277 TCTCCTATCTGCGGT TCACGTAC AGT GTACGTGA TCTTTTCGACGAAGA rplS 1242804 - 1242457 - | 50S ribosomal protein L19 Tpet_1222 1243385 - 1242807 - | hypothetical protein Tpet_1223 1244116 - 1243379 - | tRNA (guanine-N1)-methyltransferase Tpet_1224 1244646 - 1244116 - | 16S rRNA processing protein RimM Tpet_1225 1244878 - 1244651 - | RNA-binding protein Tpet_1226 1245162 - 1244875 - | ribosomal protein S16 Tpet_1227 1246477 - 1245176 - | signal recognition particle protein TERM 1330 1246611 - 1246587 - R 76 -10.1 -3.34895 | TTTATTTTCAATGAA TAGGTGGTTTA ACT TAATCCACCTA CTAAACTACACATGT Tpet_1228 1246901 - 1246629 - | acylphosphatase TERM 1331 1246738 - 1246767 + gr 75 -10.7 -2.87132 | opp_overlap 1246738 ACCTCATTCAAAAAA CGCCGAAGGGCAT TTTC ATCACCTTCGGCG TGTATGAAAACAGAC TERM 1332 1246767 - 1246738 - GR 100 -10.7 -5.09225 | opp_overlap 1246738 ACCTCATTCAAAAAA CGCCGAAGGGCAT TTTC ATCACCTTCGGCG TGTATGAAAACAGAC Tpet_1229 1247682 - 1246876 - | MscS mechanosensitive ion channel Tpet_1230 1248487 - 1247687 - | hypothetical protein TERM 1333 1248107 - 1248118 + g 79 -4.4 -5.12172 | opp_overlap 1248099 AGAGACACCCCCGTG GAGA TCGA TCTC TTTTCTTTCTTCCTG Tpet_1231 1249593 - 1248484 - | queuine tRNA-ribosyltransferase TERM 1334 1249560 - 1249571 + g 82 -3 -5.53288 | TGACACCCAGTCTTG CTTT TCCG AAAG TTTTTTTCACTTCGA Tpet_1232 1250186 - 1249578 - | formiminotransferase-cyclodeaminase Tpet_1233 1250922 - 1250176 - | deoxyribose-phosphate aldolase Tpet_1234 1251461 - 1250934 - | metal dependent phosphohydrolase Tpet_1235 1252147 - 1251479 - | DNA repair protein RadC Tpet_1236 1252688 - 1252074 - | maf protein Tpet_1237 1253157 - 1252612 - | heptaprenyl diphosphate synthase component I Tpet_1238 1253504 - 1253154 - | hypothetical protein Tpet_1239 1254559 - 1253510 - | ApbE family lipoprotein TERM 1335 1254040 - 1254062 + gr 74 -3.4 -4.9792 | overlap 1254041 TAACCATCACTCTCA TGTTCTTATC GTC GAAGAGAACG TTTTTATATCCGATA Tpet_1240 1255521 - 1254526 - | radical SAM domain-containing protein Tpet_1241 1256058 - 1255534 - | AMMECR1 domain-containing protein TERM 1336 1255940 - 1255957 + g 70 -9.9 -3.02043 | GTCACAAAAGCCCCT GCTCTTC TTTT GAAGAGC TCTTCAGGAACACTT TERM 1337 1256273 - 1256286 + Gr 75 -3.1 -5.17507 | GGTTGGGCGAAGATA CCTTT CTTG AGAGG TTTTTATTCGCTTTT Tpet_1243 1257796 - 1256921 - | glycosyl transferase family protein Tpet_1242 1256135 - 1257025 + | hypothetical protein TERM 1338 1257252 - 1257238 - GT 74 -5.6 -4.63218 | CTCCCTCGAAGAAAA CCACCG ATG CCGTGG AGAGGTAAGCTCCAA Tpet_1244 1259594 - 1257777 - | polysaccharide biosynthesis protein CapD TERM 1339 1257923 - 1257937 + g 71 -7.2 -4.16943 | opp_overlap 1257917 CTGGAAGAACGGATG TCTTCA CTC TGAAGA TTTTCGAGTGTGGAG TERM 1340 1259195 - 1259206 + g 70 -2.2 -5.09204 | TGACCAGTATTCTCT TCTC CCCT GAGG TTTTTCTTAGCCTGT Tpet_1245 1260973 - 1259588 - | metal dependent phosphohydrolase TERM 1341 1262910 - 1262882 - g 73 -7.4 -4.18494 | overlap 1262883 GAGCTTCAGGGAAAA CTGGCGATCGTT TCTTT AACGAACGCCAC GACTCAAAACATTCT TERM 1342 1262909 - 1262883 - g 75 -10.9 -3.10775 | overlap 1262882 AGCTTCAGGGAAAAC TGGCGATCGTT TCTTT AACGAACGCCA CGACTCAAAACATTC Tpet_1246 1261079 - 1263946 + | single-stranded-DNA-specific exonuclease RecJ Tpet_1247 1263943 - 1264563 + | Holliday junction resolvase YqgF Tpet_1248 1264695 - 1265705 + | cell shape determining protein MreB Tpet_1249 1265710 - 1266459 + | hypothetical protein Tpet_1250 1266477 - 1267262 + | flagellar basal-body rod protein FlgG TERM 1343 1267341 - 1267365 + G 78 -6.3 -4.67982 | opp_overlap 1267342 1267343, overlap 1267344 CTGACGTTGAAGGAA ACGCTCCTGGC TTC GCCAGGAGTTC TTTTCTTAGATGACA TERM 1344 1267364 - 1267342 - g 71 -7.6 -3.91084 | opp_overlap 1267341 1267344, overlap 1267343 TGACGTTGAAGGAAA CGCTCCTGGC TTC GCCAGGAGTT CTTTTCTTAGATGAC TERM 1345 1267363 - 1267343 - g 75 -11.1 -2.94329 | opp_overlap 1267341 1267344, overlap 1267342 GACGTTGAAGGAAAC GCTCCTGGC TTC GCCAGGAGT TCTTTTCTTAGATGA TERM 1346 1267344 - 1267362 + G 100 -14.6 -4.44914 | opp_overlap 1267343 1267342, overlap 1267341 ACGTTGAAGGAAACG CTCCTGGC TTC GCCAGGAG TTCTTTTCTTAGATG Tpet_1251 1267287 - 1268129 + | SAF domain-containing protein Tpet_1252 1268126 - 1268725 + | flagellar L-ring protein flgI 1268736 - 1269731 + | flagellar basal body P-ring protein Tpet_1254 1269742 - 1270011 + | hypothetical protein Tpet_1255 1271324 - 1269999 - | radical SAM domain-containing protein TERM 1347 1271359 - 1271378 + r 100 -13.6 -4.68593 | opp_overlap 1271359 1271362 ATTCTAACACAGAAA GAAGGGGC CGAA GCCCCTTC TTTTTACCTCATCGG TERM 1348 1271378 - 1271359 - R 100 -13.6 -4.21142 | opp_overlap 1271359, overlap 1271362 ATTCTAACACAGAAA GAAGGGGC CGAA GCCCCTTC TTTTTACCTCATCGG TERM 1349 1271375 - 1271362 - R 84 -9.5 -4.21954 | opp_overlap 1271359, overlap 1271359 CTAACACAGAAAGAA GGGGC CGAA GCCCC TTCTTTTTACCTCAT Tpet_1256 1271966 - 1271382 - | hypothetical protein Tpet_1257 1272875 - 1271979 - | polyprenyl synthetase TERM 1350 1272398 - 1272410 + gr 76 -6.3 -4.49344 | TTCCCTCAACTATGA GAAGA TAT TCTTC TTTTGTAATCGGTTT Tpet_1258 1273185 - 1272844 - | hypothetical protein Tpet_1259 1273473 - 1273195 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpet_1260 1274796 - 1273480 - | FAD dependent oxidoreductase Tpet_1261 1275809 - 1274793 - | electron transfer flavoprotein, alpha subunit-like protein Tpet_1262 1276659 - 1275802 - | electron transfer flavoprotein, alpha/beta-subunit-like protein Tpet_1263 1277387 - 1276761 - | abortive infection protein Tpet_1264 1278256 - 1277387 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase Tpet_1265 1278284 - 1278706 + | BadM/Rrf2 family transcriptional regulator Tpet_1266 1279105 - 1278668 - | rubrerythrin TERM 1351 1278721 - 1278731 + g 78 -5.4 -4.80396 | GATGTTCTTTTTCCT GATC GAT GATC TTTTTCACTGTTTTC TERM 1352 1279210 - 1279238 + r 84 -13.2 -2.57963 | opp_overlap 1279210 1279216, overlap 1279216 ATAAATTTACCAAAA GAAAAAGGCGGG AAAGC CCCGCCTTTCTC ATTGGTGATTCTGCG TERM 1353 1279238 - 1279210 - R 100 -16.1 -4.33767 | opp_overlap 1279210 1279216, overlap 1279216 ATAAATTTACCAAAA GAAAAAGGCGGGA AAG CCCCGCCTTTCTC ATTGGTGATTCTGCG TERM 1354 1279232 - 1279216 - R 100 -11.5 -5.50723 | opp_overlap 1279216 1279210, overlap 1279210 TTACCAAAAGAAAAA GGCGGGA AAG CCCCGCC TTTCTCATTGGTGAT TERM 1355 1279216 - 1279232 + r 86 -10.8 -4.08546 | opp_overlap 1279210 1279216, overlap 1279210 TTACCAAAAGAAAAA GGCGGG AAAGC CCCGCC TTTCTCATTGGTGAT Tpet_1267 1280080 - 1279256 - | glycoside hydrolase family protein Tpet_1268 1281063 - 1280077 - | glycoside hydrolase family protein TERM 1356 1280946 - 1280965 + g 76 -4.2 -5.02287 | opp_overlap 1280947, overlap 1280941 1280947 CCCAAAAATAAAAAA ACAGGGGT ATTA ATCCCTGC TTTTCTCTTTTTATC TERM 1357 1280964 - 1280947 - G 100 -5.5 -6.20267 | opp_overlap 1280946 1280941 1280947 CCAAAAATAAAAAAA CAGGGGT ATTA ATCCCTG CTTTTCTCTTTTTAT TERM 1358 1281984 - 1282018 + H 87 -11.6 -3.66883 | opp_overlap 1281944 1281999 TCCGTGGAGAGCCGA TCGGGTCTGGAATC AGAAAAA GATTTCAGACCTGA TTTGGCGTCTCTTCG TERM 1359 1282023 - 1282049 + H 100 -16.7 -5.87996 | TTCAGACCTGATTTG GCGTCTCTTCG GGGAG CGAAGAGACGC TTTTTTTATTAATTC Tpet_1269 1282079 - 1283056 + | aspartate-semialdehyde dehydrogenase TERM 1360 1283740 - 1283723 - g 76 -4.1 -5.00196 | overlap 1283725 TCTGAAAGAAGAAAA CGGAGAA ATCT TTCTCAG GGGGGATGTGAAAAG Tpet_1270 1283061 - 1283771 + | diaminopimelate epimerase TERM 1361 1284454 - 1284439 - g 72 -9 -3.60627 | GTACTTCAGCGGAAA CCTCGA AAAA TCGAGG GAGGTTCACAGAAAA Tpet_1271 1283756 - 1284640 + | dihydrodipicolinate synthase TERM 1362 1285072 - 1285033 - g 76 -4.3 -5.0133 | gap 1, overlap 1285035 CATCGCTTCAAAAAA GACGCACCCTCCGGAA CCGCGATTC TTCTGGAGAGCGCG-C TGGGAAAGAGCGTTC TERM 1363 1285071 - 1285035 - g 73 -8 -4.13561 | overlap 1285033 TCGCTTCAAAAAAGA CGCACCCTCCGGAA CCGCGATTC TTCTGGAGAGCGCG CTGGGAAAGAGCGTT Tpet_1272 1284637 - 1285287 + | dihydrodipicolinate reductase Tpet_1273 1285289 - 1285990 + | tetrahydrodipicolinate succinyltransferase domain-containing protein TERM 1364 1286405 - 1286386 - g 77 -10.8 -3.46106 | opp_overlap 1286396, overlap 1286384 GGAAAATCTGAAAGA TTACGACG TTCT CGTCGTAA CGGGCTTTCAGGGTG Tpet_1274 1286006 - 1287211 + | aspartate kinase TERM 1365 1287985 - 1287962 - g 70 -8.9 -3.35597 | opp_overlap 1287984, overlap 1287966 GTCATCGTTGAAATA GGAAGGTAC ATCGTA GCACCTTCC GGGTACCTGCTTCTC Tpet_1275 1287221 - 1288381 + | diaminopimelate decarboxylase TERM 1366 1288552 - 1288542 - g 74 -6.8 -4.23244 | opp_overlap 1288542 TAGAAAAGAAGGAAA CGGA AGA TCCG TACGTTGTTCTGAGA TERM 1367 1288847 - 1288865 + G 78 -6.6 -4.65895 | GATGCCGGAACTGTG GCATCCCG ACC CGGAGTGC TTTTTGCCTCAGCCA Tpet_1276 1288382 - 1289455 + | amidohydrolase Tpet_1277 1289470 - 1289880 + | ferric uptake regulator family protein Tpet_1278 1289856 - 1290269 + | hypothetical protein TERM 1368 1291025 - 1291037 + G 76 -7.7 -4.32046 | opp_overlap 1291024 TTCCTCGAGAATATG GGAGA TTT TCTCC TTTCATTTTTCAGAC TERM 1369 1291085 - 1291060 - g 74 -5.6 -4.70659 | gap 1, opp_overlap 1291059 1291060 TTTCAGACTGAAAAA CATGGAGTTCT TCGAG AGAA-TCCATG GTTTTTCCGAGGGAC TERM 1370 1291332 - 1291311 - g 81 -8.1 -4.46267 | opp_overlap 1291301, overlap 1291301 1291297 1291313 1291330 AGAAGGGAAGGAAAA TCCTTTCTC TCAT GAGAAAGAA GGCAAAACTTCCGAT Tpet_1279 1290287 - 1291543 + | hypothetical protein Tpet_1280 1292808 - 1291513 - | sun protein TERM 1371 1291675 - 1291687 + g 78 -4.8 -5.02606 | GGAGACGAATCTTTT CACC ACTTC GGTG TTTTCTTCTTTCGTC TERM 1372 1291916 - 1291928 + g 74 -3.3 -5.07275 | TACTCTGTGAGTCTT TCGAC ATC GGCGA TTTTTGTCTCTATCG TERM 1373 1291954 - 1291968 + g 74 -5.6 -4.57073 | TATCGAAGAGAGTTT CAGGCG TTT CGCGTG TTTTTCGACAAGCTG TERM 1374 1292237 - 1292221 - G 78 -6.5 -4.63007 | overlap 1292211 TACAACCAGAGAAAA CGGGG CGTGTTT CCCCG GAACTGCCTCCGTGC TERM 1375 1292738 - 1292714 - G 100 -12.2 -5.02074 | opp_overlap 1292715 1292718 TTATCGTCCAAAAAA GAGAGGACGC TGTCC ACGTCCTCTC TCAATATGAATTTTT Tpet_1281 1293497 - 1292805 - | peptidase, membrane zinc metallopeptidase, putative Tpet_1282 1294730 - 1293510 - | hypothetical protein Tpet_1283 1295137 - 1294685 - | hypothetical protein Tpet_1284 1296443 - 1295118 - | metal dependent phosphohydrolase Tpet_1285 1297459 - 1296491 - | PhoH family protein Tpet_1286 1297512 - 1297931 + | hypothetical protein rpsL 1298053 - 1298436 + | 30S ribosomal protein S12 Tpet_1288 1298448 - 1298915 + | 30S ribosomal protein S7 TERM 1376 1299708 - 1299675 - g 72 -8.2 -3.75115 | overlap 1299671 TCTTGAGAAAAGCAA CCATAGAAAACAGG GCAGTT CCCGTTCTCTGTGG AGCGGCGAAAGCCAA Tpet_1289 1298921 - 1301008 + | translation elongation factor G TERM 1377 1301048 - 1301035 - g 71 -3.9 -4.86621 | ATGGCGAAGGAAAAA TTTGT AAGA ACAAA ACCGCATGTTAACGT TERM 1378 1302020 - 1302010 - g 72 -5.4 -4.38154 | ACACCGTTCACAAAA GGTT ACA AACC CCAGTTCTACATAAG Tpet_1290 1301020 - 1302222 + | elongation factor Tu TERM 1379 1302220 - 1302241 + F 89 -10.1 -4.56597 | opp_overlap 1302212, overlap 1302221 1302236 ACAGAAGTCATCGAG TGAGGGGGA CGCT TCCCCCTCC TTTTTGAGAAAAGAG TERM 1380 1302221 - 1302240 + F 100 -13.6 -3.33744 | opp_overlap 1302212, overlap 1302220 1302236 CAGAAGTCATCGAGT GAGGGGGA CGCT TCCCCCTC CTTTTTGAGAAAAGA Tpet_1291 1302273 - 1302581 + | 30S ribosomal protein S10 TERM 1381 1302817 - 1302801 - g 70 -2.2 -5.07567 | overlap 1302802 GGACACTTCAAAAAA TTCGGT GTGGA ACCGAT GAAAATACTCAGAGA Tpet_1292 1302600 - 1303223 + | ribosomal protein L3 TERM 1382 1303677 - 1303656 - gf 70 -9.5 -2.95073 | overlap 1303655 1303650 GGCCGAAGACGAAAT TTCTGAAGG AAAT CCTCCAGAA CCTTCAGCTTTCCGA rplD 1303244 - 1303951 + | 50S ribosomal protein L4 Tpet_1294 1303923 - 1304225 + | ribosomal protein L25/L23 rplB 1304239 - 1305069 + | 50S ribosomal protein L2 Tpet_1296 1305083 - 1305370 + | ribosomal protein S19 TERM 1383 1305409 - 1305421 + G 72 -4.9 -4.72272 | GTACCCAGAAGCAGT TTGAA GCG TTCAA TTTTTCATAAAAAGA TERM 1384 1305457 - 1305435 - g 78 -5.6 -4.84017 | overlap 1305444 AATTTTTCATAAAAA GAGAAAAGAG CTC CTGTCTTCTC TTCCGAAGATTGAAG Tpet_1297 1305382 - 1305861 + | ribosomal protein L22 Tpet_1298 1305871 - 1306500 + | ribosomal protein S3 TERM 1385 1306764 - 1306746 - g 81 -5.3 -5.21709 | gap 1, overlap 1306749 CCTTACACGAAAAAA CCA-CCTG AATC CAGGATGG GAAAAGGTAAGGGTA rplP 1306515 - 1306943 + | 50S ribosomal protein L16 Tpet_1300 1306940 - 1307140 + | ribosomal protein L29 rpsQ 1307145 - 1307468 + | 30S ribosomal protein S17 Tpet_1302 1307465 - 1307833 + | ribosomal protein L14 rplX 1307846 - 1308163 + | 50S ribosomal protein L24 TERM 1386 1308675 - 1308702 + G 77 -10.6 -3.3879 | opp_overlap 1308675 1308673 1308671 1308677 1308684, overlap 1308673 1308680 ACAACTGCAAAGACA GATCAGGAAGCC AGAA GGCTTCTTGAGC TCTTTGGCATGCCTT TERM 1387 1308700 - 1308677 - g 71 -9.6 -3.19687 | opp_overlap 1308675 1308673 1308680, overlap 1308675 1308673 1308671 1308684 AACTGCAAAGACAGA TCAGGAAGCC AGAA GGCTTCTTGA GCTCTTTGGCATGCC rplE 1308150 - 1308731 + | 50S ribosomal protein L5 Tpet_1305 1308746 - 1308931 + | ribosomal protein S14 Tpet_1306 1308947 - 1309351 + | ribosomal protein S8 rplF 1309365 - 1309919 + | 50S ribosomal protein L6 TERM 1388 1309969 - 1309958 - g 79 -2.2 -5.49729 | AAGGAGTCAAAAAAA GAGC AGCG ACTC AGAAGGCACAGAAGA TERM 1389 1310010 - 1309996 - g 73 -4.2 -4.76644 | AAGAGTTAGGAAAAA GGTGTT TGG AACTCC CGAAAGACCAAGGCT Tpet_1308 1309934 - 1310302 + | ribosomal protein L18 TERM 1390 1310394 - 1310384 - g 74 -6.8 -4.25957 | AGATAATAGAAATAA GGAG AAC CTCC AAAGTCACAAAGGGT Tpet_1309 1310317 - 1310853 + | ribosomal protein S5 Tpet_1310 1310846 - 1311049 + | ribosomal protein L30 Tpet_1311 1311046 - 1311489 + | ribosomal protein L15 TERM 1391 1311572 - 1311604 + G 71 -10 -3.12351 | gap 1, overlap 1311579 CTCGCTTTGATCGTT TTCAGGA-TGGGGAT TTAC ATCCCCGTTCCTGGA TTGAATCTGGAAGCG secY 1311491 - 1312786 + | preprotein translocase subunit SecY TERM 1392 1313131 - 1313103 - g 71 -3.9 -4.77757 | TTTGAAAAATCAAAA CAAAGAGCTCA CGGCTGC TGTACTCTTTG AAGTTCCTGAAGAAG Tpet_1313 1312783 - 1313445 + | nucleoside-triphosphate--adenylate kinase TERM 1393 1313998 - 1314012 + G 73 -11.4 -2.73875 | opp_overlap 1313993 1313990 1313998, overlap 1313995 1314000 TTCCAAATTACGGAA CACCCG GAA CGGGTG TGATATTAAGAAAGG TERM 1394 1314012 - 1313998 - g 77 -11.4 -3.1634 | opp_overlap 1313995 1313998 1314000, overlap 1313993 1313990 TTCCAAATTACGGAA CACCCG GAA CGGGTG TGATATTAAGAAAGG Tpet_1314 1313442 - 1314194 + | methionine aminopeptidase, type I Tpet_1315 1314196 - 1314420 + | translation initiation factor IF-1 rpmJ 1314438 - 1314554 + | 50S ribosomal protein L36 TERM 1395 1314629 - 1314611 - g 83 -4.4 -5.38549 | TCCAAACAACAAAAA GGTCTGGG TGG CGCTGACC TACATCTATGGAATT rpsM 1314570 - 1314947 + | 30S ribosomal protein S13 Tpet_1318 1314966 - 1315358 + | 30S ribosomal protein S11 TERM 1396 1315454 - 1315444 - g 71 -6.8 -4.14056 | ATCTTAAAGGAGAAA GGTG TTA CACC GATAAGTGTGCTTTT TERM 1397 1315859 - 1315847 - g 76 -4.8 -4.77157 | CGAAGTGATCAAAAA GGCT GTAGA AGCC AACAAAGAAAGAAGC rpsD 1315371 - 1316000 + | 30S ribosomal protein S4 TERM 1398 1316159 - 1316129 - g 72 -10.5 -2.91668 | opp_overlap 1316129 1316128 1316132, overlap 1316128 ATCACGATAGGAAAC GCATTGAGGAGAG TTCTT CTCTCCTCCATAC CTTCTCTCGCAATCG Tpet_1320 1316006 - 1317016 + | DNA-directed RNA polymerase subunit alpha TERM 1399 1317100 - 1317075 - g 74 -3.3 -4.99035 | opp_overlap 1317090, overlap 1317076 GTAGCCACAGAAAAA GTCTCTTGAGA AACC TTTCAAGAGAA ATCGTTGAACACGGT TERM 1400 1317246 - 1317219 - g 93 -10.7 -4.40173 | opp_overlap 1317219 ATGATAAAGCCAAAA GCGTTCATCTG AGGAGG CAGATAAACGC TGTGCTTGGAGACAG Tpet_1321 1317020 - 1317415 + | ribosomal protein L17 TERM 1401 1317391 - 1317422 + F 100 -11.7 -5.30616 | gap 1 GCTCGTTCAGCTTGT GGAGGCATCCAGTC AGGAA GGCTG-ATGCCTCC TTTTTCTTTCCCTCC TERM 1402 1317826 - 1317809 - g 73 -7.7 -4.05629 | AGGAAACCGAAAGAA GGCGAAA AGTA CTTCGCC ATGATAAAAATCGAA rho 1317470 - 1318753 + | transcription termination factor Rho TERM 1403 1318917 - 1318900 - g 79 -9.9 -3.81848 | opp_overlap 1318903, overlap 1318903 AAGATGTGATAAGAA GAATCGC CGAA GCGATTC TGGAGGTGGCTGATG Tpet_1323 1318770 - 1319714 + | ROK family protein TERM 1404 1319837 - 1319827 - gT 74 -6.8 -4.21194 | TGGGAGGATGGAAAA TCCG AGC CGGA TGAGAGAAAACCGGA Tpet_1325 1321027 - 1320521 - | hypothetical protein Tpet_1324 1319719 - 1320585 + | degV family protein TERM 1405 1320592 - 1320581 - GT 70 -2.2 -4.93365 | TTTTAGAACGAAAAA GATG AAAA CACC GATGAACACAAGTAT Tpet_1326 1322310 - 1321024 - | metal dependent phosphohydrolase TERM 1406 1321084 - 1321101 + g 71 -6.9 -4.14652 | CAAGTCGACGAGTCT GGGGTCG AGGA CAACCCC TTTCATGTTTTTCAT TERM 1407 1321543 - 1321554 + g 70 -2.2 -5.06816 | overlap 1321528 TTCGCTGTGACCGCG GGTG TATT CATC TTTTTCTTCAAGACT Tpet_1327 1323171 - 1322584 - | small GTP-binding protein TERM 1408 1322680 - 1322710 + g 74 -3.3 -5.08169 | gap 1, overlap 1322681 CGTGTACTCTCCGTA CCTTG-AGAACTCC TTCT GGTGTTCTTCAAGC TTTTTTGCCCTCTCT Tpet_1328 1323221 - 1323733 + | cob(I)yrinic acid a,c-diamide adenosyltransferase Tpet_1329 1323745 - 1324599 + | indigoidine synthase A family protein rpmH 1324657 - 1324791 + | 50S ribosomal protein L34 Tpet_1331 1324788 - 1325141 + | ribonuclease P protein component TERM 1409 1325340 - 1325350 + G 72 -5.4 -4.4078 | GTGGTTACGATCCTG TTCC CGA GGAA TTTTCATTCAAACCA Tpet_1332 1325138 - 1325383 + | hypothetical protein Tpet_1333 1325380 - 1326711 + | 60 kDa inner membrane insertion protein Tpet_1334 1326723 - 1327388 + | single-stranded nucleic acid binding R3H domain-containing protein Tpet_1335 1327366 - 1327710 + | cupin 2 domain-containing protein Tpet_1336 1327839 - 1328153 + | ribosomal protein L21 Tpet_1337 1328150 - 1328434 + | hypothetical protein rpmA 1328424 - 1328675 + | 50S ribosomal protein L27 Tpet_1339 1328665 - 1329231 + | membrane protein-like protein rplM 1329224 - 1329673 + | 50S ribosomal protein L13 Tpet_1341 1329693 - 1330097 + | ribosomal protein S9 TERM 1410 1330119 - 1330145 + F 100 -11.5 -5.24799 | opp_overlap 1330118 1330117, overlap 1330121 TGGCAGCAGACAATC GCGGGGTCCGG TTCTC CCGGACCTCTC TTTTTCTGTTTATCG TERM 1411 1330121 - 1330143 + F 100 -12.7 -4.23487 | opp_overlap 1330118 1330117, overlap 1330119 GCAGCAGACAATCGC GGGGTCCGG TTCTC CCGGACCTC TCTTTTTCTGTTTAT Tpet_1342 1330548 - 1332245 + | DNA primase Tpet_1343 1332251 - 1333474 + | RpoD family RNA polymerase sigma factor TERM 1412 1333465 - 1333492 + T 93 -9.2 -5.09895 | gap 1, opp_overlap 1333465 1333469, overlap 1333469 TCTGATGGATGAAAA CG-AAGGGTGAGC CCT GCTCACCCTTTCA TTTTTTCAGTAAGTC TERM 1413 1333492 - 1333465 - T 93 -11.4 -4.2828 | gap 1, opp_overlap 1333465 1333469, overlap 1333469 TCTGATGGATGAAAA CG-AAGGGTGAGC CCT GCTCACCCTTTCA TTTTTTCAGTAAGTC TERM 1414 1333487 - 1333469 - T 100 -14.6 -3.72073 | opp_overlap 1333465 1333469, overlap 1333465 ATGGATGAAAACGAA GGGTGAGC CCT GCTCACCC TTTCATTTTTTCAGT TERM 1415 1333469 - 1333487 + T 100 -14.6 -4.43669 | opp_overlap 1333469 1333465, overlap 1333465 ATGGATGAAAACGAA GGGTGAGC CCT GCTCACCC TTTCATTTTTTCAGT Tpet_1344 1336171 - 1333490 - | transcription-repair coupling factor TERM 1416 1334901 - 1334881 - G 71 -9.7 -3.28712 | opp_overlap 1334878 GTTGTCTTGCCAGAA CGGTGGTTG GTA CAAGCACCG CTACCTGTTTACCAG Tpet_1345 1336586 - 1336164 - | TPR repeat-containing protein Tpet_1346 1338162 - 1336573 - | TPR repeat-containing protein TERM 1417 1338031 - 1338053 + g 75 -11.4 -2.98088 | overlap 1338019 1338033 1338046 GTAGAAGATCTCCTC TATCTTCTGC TGT GCGGAAGATA TATCTCCCTTTACCC TERM 1418 1338033 - 1338051 + g 70 -9.6 -3.04196 | overlap 1338019 1338031 1338046 AGAAGATCTCCTCTA TCTTCTGC TGT GCGGAAGA TATATCTCCCTTTAC Tpet_1347 1338757 - 1338167 - | hypothetical protein TERM 1419 1338437 - 1338424 - G 70 -5.3 -4.45187 | opp_overlap 1338432 1338434, overlap 1338432 AAAGACAGAAAATAA TTCCA AGAG TGGAA GCGACTCCCTTTCCA Tpet_1348 1340081 - 1338762 - | small GTP-binding protein TERM 1420 1339339 - 1339359 + g 74 -8.2 -3.96148 | opp_overlap 1339339 CTGTACTTCTCAACA GTCCTGGG CTCGA CCCTGGAC TTTCTCCTCAAACCA TERM 1421 1339965 - 1339982 + g 86 -11.3 -3.82084 | TACAGTATCTTGAAC GGGGTCA CGAG TGACCCC TTCTTCATCTTCGAC Tpet_1349 1341715 - 1340084 - | RNA-binding S1 domain-containing protein TERM 1422 1340410 - 1340427 + g 73 -7.7 -4.05004 | CTTTGAGTGCACGTT CCCAAGG ATTT TCTTGGG TTCTTCTTATGCTGA TERM 1423 1340697 - 1340707 + g 80 -5.4 -5.00136 | overlap 1340689 TTTGCTTTTCTGTAA CTCA GAG TGAG TTTTCTGTTTTCTTT Tpet_1350 1342529 - 1341702 - | hydroxymethylbutenyl pyrophosphate reductase Tpet_1351 1343188 - 1342526 - | cytidylate kinase TERM 1424 1343047 - 1343037 - G 73 -4.6 -4.91109 | TTTTCAGCAGAAAAA GGGC TGA ACCC TCTTTCGTGTAGATA Tpet_1352 1343522 - 1343190 - | anti-sigma-factor antagonist Tpet_1353 1345263 - 1343524 - | aspartyl-tRNA synthetase TERM 1425 1344803 - 1344824 + g 71 -3.7 -4.85267 | TCAAGGAAACCGAGT TCATCGAAG TAAT CTCTGATGA TTTTTGATACTTTGT Tpet_1354 1345961 - 1345257 - | initiation factor 2B related TERM 1426 1345423 - 1345433 + g 77 -6.8 -4.42464 | opp_overlap 1345420 AGAATGGCAAGAGTG GTGG TTC CCAC TTTGTTTAAAACATT TERM 1427 1345661 - 1345675 + g 100 -2.8 -6.20267 | overlap 1345663 GCAGTGTTTTGCTGT TACTCA GTG TGAGAA TTTTTTTATTTTTGA Tpet_1355 1346161 - 1346916 + | hypothetical protein Tpet_1356 1346921 - 1348507 + | hypothetical protein TERM 1428 1348566 - 1348551 - g 73 -4 -4.87318 | gap 1, opp_overlap 1348552 1348554, overlap 1348552 1348554 TGTAAAATTGAAAAA GCACCTG GGA CAGGT-C TTTCTTTCAGACGAT Tpet_1357 1348504 - 1349286 + | dimethyladenosine transferase TERM 1429 1349547 - 1349537 - g 88 -8.2 -4.87389 | opp_overlap 1349536 CATCGCAAAAAGAAA CGGG GTT CCCG CTGTCCTCAGATTCT TERM 1430 1349704 - 1349674 - g 81 -3.9 -5.40474 | gap 1, opp_overlap 1349675, overlap 1349676 AGGTGGCTAAAAAAA TACCCGGCAG-GAC CGTG ATCGCCGCCGGGCT CGTTGAAACAGAGGA TERM 1431 1349702 - 1349676 - g 79 -8.7 -4.34482 | gap 1, opp_overlap 1349675, overlap 1349674 GTGGCTAAAAAAATA CCCGGCAG-GAC CGTG ATCGCCGCCGGG CTCGTTGAAACAGAG Tpet_1358 1349271 - 1349801 + | glycerol-3-phosphate responsive antiterminator Tpet_1359 1350153 - 1349758 - | CoA-binding domain-containing protein TERM 1432 1349902 - 1349914 + gT 100 -3.3 -5.80003 | overlap 1349903 GAACCTTCTGAAACC TGCGT TGT ACGCC TTTTTTGTTTCTTCA TERM 1433 1349903 - 1349913 + gT 71 -6.8 -4.05561 | overlap 1349902 AACCTTCTGAAACCT GCGT TGT ACGC CTTTTTTGTTTCTTC Tpet_1360 1350520 - 1350104 - | hypothetical protein Tpet_1361 1351733 - 1350522 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tpet_1362 1353169 - 1351730 - | FAD dependent oxidoreductase TERM 1434 1352557 - 1352576 + g 74 -8.6 -3.88787 | gap 1 ACTTCGCTATCTCGT CTGCG-TGG AGC CCAGCGCAG TTTATCACGATATCC TERM 1435 1353190 - 1353229 + r 100 -12.2 -4.65446 | opp_overlap 1353194, overlap 1353192 1353194 GCACCTCCTTAAACA AAAAGAGCCATACCCCAC TCTC GTGGGATATGGCTCTCTC TTTTCTCTCTCTCCT TERM 1436 1353192 - 1353227 + r 100 -14.8 -3.9328 | opp_overlap 1353194, overlap 1353190 1353194 ACCTCCTTAAACAAA AAGAGCCATACCCCAC TCTC GTGGGATATGGCTCTC TCTTTTCTCTCTCTC TERM 1437 1353194 - 1353225 + r 100 -17.4 -3.53768 | opp_overlap 1353194, overlap 1353192 1353190 CTCCTTAAACAAAAA GAGCCATACCCCAC TCTC GTGGGATATGGCTC TCTCTTTTCTCTCTC TERM 1438 1353225 - 1353194 - R 100 -19.6 -5.27335 | opp_overlap 1353194 1353192 1353190 CTCCTTAAACAAAAA GAGCCATACCCCAC TCTC GTGGGATATGGCTC TCTCTTTTCTCTCTC Tpet_1363 1353802 - 1353248 - | glycerol-3-phosphate responsive antiterminator Tpet_1364 1355273 - 1353783 - | glycerol kinase TERM 1439 1353953 - 1353967 + g 73 -7.8 -4.0825 | opp_overlap 1353952 1353955, overlap 1353962 GTCCTGCAAGGTAAG CAGCTC CAA GGGCTG TTGTTTCGTTCACAA TERM 1440 1355300 - 1355323 + r 87 -13.8 -3.04931 | opp_overlap 1355300, overlap 1355294 TTTTGAACATAAAAA GCCCCGGGGA ACTT TCCCCAGGGC TCTCTCATTCTCTGA TERM 1441 1355323 - 1355300 - R 100 -16 -5.0916 | opp_overlap 1355300 1355294 TTTTGAACATAAAAA GCCCCGGGGA ACTT TCCCCAGGGC TCTCTCATTCTCTGA Tpet_1365 1357057 - 1355357 - | methyl-accepting chemotaxis sensory transducer TERM 1442 1357149 - 1357121 - R 72 -10.4 -2.87274 | opp_overlap 1357121 1357128, overlap 1357128 GAATTATAACATAAT GAAAAAAGGGGC TGAAC GCCCCTTTTTTT CTTTTCGAGACGTTT TERM 1443 1357121 - 1357150 + r 82 -10.2 -4.10855 | gap 1, opp_overlap 1357121 1357128, overlap 1357128 GAATTATAACATAAT GAAAAAA-GGGGC TGAAC GCCCCTTTTTTTC TTTTCGAGACGTTTT TERM 1444 1357142 - 1357128 - R 100 -8.5 -5.3671 | opp_overlap 1357121 1357128, overlap 1357121 AACATAATGAAAAAA GGGGC TGAAC GCCCC TTTTTTTCTTTTCGA TERM 1445 1357128 - 1357142 + r 100 -8.5 -6.09196 | opp_overlap 1357128 1357121, overlap 1357121 AACATAATGAAAAAA GGGGC TGAAC GCCCC TTTTTTTCTTTTCGA Tpet_1366 1357780 - 1357166 - | redox-sensing transcriptional repressor Rex Tpet_1367 1359710 - 1357773 - | hydrogenase large subunit Tpet_1368 1361604 - 1359724 - | NADH dehydrogenase (quinone) Tpet_1369 1362082 - 1361597 - | NADH dehydrogenase (ubiquinone), 24 kDa subunit TERM 1446 1361662 - 1361687 + g 74 -8.3 -3.87815 | CTTTCACCTTATCGG CCGTGAGGTTT CCAT AGACCTCACCG TTTATCACCATGACC Tpet_1370 1363234 - 1362095 - | stage II sporulation E family protein TERM 1447 1362689 - 1362703 + g 75 -2.8 -5.186 | opp_overlap 1362691, overlap 1362688 1362691 AACGTGGTTTTTCAG AAGATG CTT CATCTC TTTTTCTATGTTTTC Tpet_1371 1364786 - 1363221 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1448 1363768 - 1363778 + g 74 -6.8 -4.34402 | CAGTTCAACTCTTTG GACG GAT CGTC TTTTCCTATGGACAC Tpet_1372 1364988 - 1364779 - | NADH:ubiquinone oxidoreductase 24 kD subunit-like protein TERM 1449 1364903 - 1364919 + g 74 -5.9 -4.65933 | overlap 1364911 AAACACAATGAACCG TACAGCT TGA AGTTGTA TTTCTTTTGAAGCTC TERM 1450 1365027 - 1365042 + H 72 -7.6 -4.09353 | opp_overlap 1365027 1365026 TCGTTCCTTTCAAAT CGTGAA CCTT TTCACG TTATATTTTTCACTA Tpet_1373 1365274 - 1366422 + | myo-inositol-1-phosphate synthase TERM 1451 1366420 - 1366439 + F 100 -13.6 -4.72007 | AAACCGAAGTGGCTG TGAGGGGC TTGA GCCCCTCA TTTCTTTTCGTGGAG Tpet_1374 1366463 - 1367188 + | nucleotidyl transferase TERM 1452 1367209 - 1367194 - g 86 -9 -4.38712 | opp_overlap 1367187 1367194 GGCATGCTGAGAAAA TCCACC GATG GGTGGA TTTCTTCTCTGATAA TERM 1453 1367194 - 1367209 + G 86 -9 -4.41114 | opp_overlap 1367194, overlap 1367187 GGCATGCTGAGAAAA TCCACC GATG GGTGGA TTTCTTCTCTGATAA Tpet_1375 1367182 - 1367799 + | CDP-alcohol phosphatidyltransferase TERM 1454 1368523 - 1368509 - g 73 -4.2 -4.84359 | GCAGTTCTACAAAAA CAGCTG TGA CAGATG TGATCATCCGAATGA Tpet_1376 1367832 - 1368563 + | ABC transporter related TERM 1455 1368729 - 1368697 - g 73 -10.5 -3.11634 | overlap 1368692 GGTCATAGGACTCAA CGGTGTGGAGGGAGT AGA ACTCACTCCCCACAG GATAGAGAACGGTGT Tpet_1377 1368560 - 1369513 + | SufBD protein TERM 1456 1369623 - 1369642 + F 80 -9.2 -4.03885 | overlap 1369624 GCCGCACCCACCAGC AGGCTCCC TCAA GGGAGCCG TTAATTTTTTTAAAG TERM 1457 1369624 - 1369641 + F 83 -12.7 -3.01247 | overlap 1369623 CCGCACCCACCAGCA GGCTCCC TCAA GGGAGCC GTTAATTTTTTTAAA Tpet_1378 1369670 - 1370440 + | inositol monophosphatase Tpet_1379 1370442 - 1371740 + | Beta-fructofuranosidase TERM 1458 1372812 - 1372838 + T 81 -6.5 -4.89233 | opp_overlap 1372816, overlap 1372816 CTCCATAAAAAAACA AAAAGGCAGGG AAACC CCCTGCCTTCG TTTTTGCTGTTGATA TERM 1459 1372816 - 1372834 + T 93 -11.7 -3.87412 | opp_overlap 1372816, overlap 1372812 ATAAAAAAACAAAAA GGCAGGG AAACC CCCTGCC TTCGTTTTTGCTGTT TERM 1460 1372834 - 1372816 - T 100 -12.4 -5.89659 | opp_overlap 1372812 1372816 ATAAAAAAACAAAAA GGCAGGGA AAC CCCCTGCC TTCGTTTTTGCTGTT Tpet_1380 1373626 - 1372856 - | daunorubicin resistance ABC transporter, inner membrane subunit B Tpet_1381 1374614 - 1373631 - | daunorubicin resistance ABC transporter ATPase subunit TERM 1461 1373842 - 1373855 + g 76 -4.5 -5.0133 | ACGTTCAGCTCCAGC CTTCC ATCG GGGAG TTTTTTACACGACTC TERM 1462 1374513 - 1374527 + g 76 -4.2 -5.00616 | opp_overlap 1374513 GTTTGGGCCAAGAAA GGCGAA GAC TTCTCC TTTTTTCACCGAAAA TERM 1463 1374659 - 1374640 - R 76 -8 -4.26188 | opp_overlap 1374644 TCCATAGAGTCAAAA GATATATC GATA GATATATC CTCCGAAATTGATTA TERM 1464 1374885 - 1374866 - R 100 -12.8 -6.01369 | TAAAGAAGAAAAAAA GCCGGGAG ACAA CCCCCGGC TTCAGATTCCCAGTT Tpet_1382 1375813 - 1374887 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Tpet_1383 1376967 - 1375813 - | aminotransferase, class V Tpet_1384 1377174 - 1377731 + | ribosome recycling factor TERM 1465 1378088 - 1378077 - g 86 -4.4 -5.4756 | AAGTGGAAGAAAAAA CGAA AGAG TTCG ATCGGATGACGCTTG Tpet_1385 1377728 - 1378429 + | undecaprenyl diphosphate synthase TERM 1466 1378786 - 1378801 + G 76 -7.6 -4.25104 | TCCTCAGTTTCTTTC TTCCGA TTTA TCGGAA TTTTGGTGCCGCGAA TERM 1467 1378906 - 1378891 - g 71 -6.8 -4.12942 | TGAAATTTGGCAAAA CGAGGA TCTC TCCCCG ATACAGTCCAAGAAA TERM 1468 1378953 - 1378970 + G 80 -5.5 -4.9792 | ATAGGAGGATTCCTG GGTGTTG TCAT CTACACC TTTTTGTATCGACTC Tpet_1386 1378422 - 1379234 + | phosphatidate cytidylyltransferase TERM 1469 1380055 - 1380044 - g 73 -2.2 -5.17744 | ACAGATGAAGAAAAA GACG TTTC CATC AGGGTCATAGCCGAT TERM 1470 1380085 - 1380107 + G 74 -7.1 -4.27316 | gap 1, opp_overlap 1380078 TCATATGAGGGCCAT CACCTTC-CT GATC AGTGAAGGTG TTTTCCCTTCCAACG TERM 1471 1380728 - 1380705 - g 72 -5.3 -4.57073 | opp_overlap 1380690, overlap 1380692 TAGTGTTTTCAAAAA CACCATTCT ACGCTG AGAAGGGTG GTCAGGTATCCGACA TERM 1472 1381369 - 1381358 - g 83 -4.4 -5.43621 | AGAAACCAGAAAAAA CTGA TCGA TCAG CTGAAAGAAATCCTC Tpet_1387 1379231 - 1381822 + | alanyl-tRNA synthetase TERM 1473 1382845 - 1382814 - g 73 -7.4 -4.11404 | overlap 1382808 TTGAGATCACAGAAA GGTTCCTGAAGA TCTCCAAT TTTTCAGGAACC AGAGTTATCTACCTT Tpet_1388 1381829 - 1382881 + | hypothetical protein Tpet_1389 1383709 - 1382837 - | Hsp33 protein Tpet_1390 1384374 - 1383706 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tpet_1391 1384667 - 1384371 - | hypothetical protein Tpet_1392 1387049 - 1384674 - | ATPase TERM 1474 1386418 - 1386441 + g 90 -10.2 -4.25538 | overlap 1386414 GCTGTCTTTCCCACT CCCGGGTCTC CTAT GAGGACCGGG TTGTTCTTTGTTCTT TERM 1475 1388110 - 1388129 + r 77 -11.4 -2.51535 | opp_overlap 1388110, overlap 1388109 1388107 AGGTTAACAAAAAAA CCGGAGGG AAAA TCCTCCGG CTGATTTTGTGGTGC TERM 1476 1388129 - 1388110 - R 100 -10.7 -5.80364 | opp_overlap 1388110 1388109 1388107 AGGTTAACAAAAAAA CCGGAGG GAAAAT CCTCCGG CTGATTTTGTGGTGC TERM 1477 1388459 - 1388440 - R 86 -13.6 -2.80816 | opp_overlap 1388440, overlap 1388442 GCCGCACCCACCACA GAGGAGCC TTCA GGCTCCTC TTTTCTTTTTCAGAA TERM 1478 1388440 - 1388459 + r 100 -13.6 -5.26119 | opp_overlap 1388440 1388442 GCCGCACCCACCACA GAGGAGCC TTCA GGCTCCTC TTTTCTTTTTCAGAA TERM 1479 1388457 - 1388442 - R 72 -10.4 -2.95298 | opp_overlap 1388440, overlap 1388440 CGCACCCACCACAGA GGAGCC TTCA GGCTCC TCTTTTCTTTTTCAG Tpet_1394 1389195 - 1388449 - | methyltransferase type 11 TERM 1480 1388692 - 1388674 - G 88 -7.4 -4.94962 | opp_overlap 1388676 1388685, overlap 1388676 AGAATTGAAAGAAAA GAGTGTGG TTC CCACACTT GTGGTTTGTGTTTTC TERM 1481 1388676 - 1388690 + g 79 -10 -3.69613 | opp_overlap 1388674 1388676, overlap 1388685 AATTGAAAGAAAAGA GTGTGG TTC CCACAC TTGTGGTTTGTGTTT TERM 1482 1388690 - 1388676 - G 83 -10 -4.08189 | opp_overlap 1388676 1388685, overlap 1388674 AATTGAAAGAAAAGA GTGTGG TTC CCACAC TTGTGGTTTGTGTTT TERM 1483 1388685 - 1388696 + g 72 -5.8 -4.45168 | opp_overlap 1388676 1388674, overlap 1388676 AAAAGAGTGTGGTTC CCAC ACTT GTGG TTTGTGTTTTCAAAA Tpet_1395 1389719 - 1389192 - | putative methyltransferase coaE 1390243 - 1389701 - | dephospho-CoA kinase TERM 1484 1389917 - 1389956 + g 100 -11.7 -4.61162 | gap 2, opp_overlap 1389922, overlap 1389921 1389922 CAGTCCCATTCTTTT CAGAA-GAGCGGCCTC-TA TTAC TACGAGGCCGCTCGTTTTG TTTATTATTTCCTGT TERM 1485 1389921 - 1389951 + g 100 -10.5 -5.20331 | gap 1, opp_overlap 1389922, overlap 1389917 1389922 CCCATTCTTTTCAGA AGAGCGGCCTC-TA TTAC TACGAGGCCGCTCG TTTTGTTTATTATTT TERM 1486 1389950 - 1389922 - G 86 -14 -3.29144 | gap 1, opp_overlap 1389921 1389917 1389922 CCATTCTTTTCAGAA GAGCGGCCTC-TA TTAC TACGAGGCCGCTC GTTTTGTTTATTATT TERM 1487 1389922 - 1389950 + g 100 -14 -3.68538 | gap 1, opp_overlap 1389922, overlap 1389921 1389917 CCATTCTTTTCAGAA GAGCGGCCTC-TA TTAC TACGAGGCCGCTC GTTTTGTTTATTATT TERM 1488 1390099 - 1390109 + g 77 -6.8 -4.46267 | opp_overlap 1390099 CAGATCCTCCAAAAA GCTC GAC GAGC TTTTCCTTCACTTCT TERM 1489 1390109 - 1390099 - G 80 -6.8 -4.59109 | opp_overlap 1390099 CAGATCCTCCAAAAA GCTC GAC GAGC TTTTCCTTCACTTCT Tpet_1397 1390467 - 1390237 - | hypothetical protein Tpet_1398 1391810 - 1390464 - | glucose-6-phosphate isomerase Tpet_1399 1392334 - 1391822 - | adenine phosphoribosyltransferase Tpet_1400 1393151 - 1392336 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Tpet_1401 1393696 - 1393097 - | NUDIX hydrolase Tpet_1402 1394086 - 1393697 - | hypothetical protein Tpet_1403 1394771 - 1394103 - | hypothetical protein Tpet_1404 1396048 - 1394771 - | seryl-tRNA synthetase TERM 1490 1395061 - 1395106 + g 100 -11.9 -4.58663 | gap 1, overlap 1395063 TTGCGGAGGTGAACC CGAGATCTCCCGTACAGAG-CG AAA CGACTCTGTATGGGAGCTCCAG TTTTTGAAGAATGGT TERM 1491 1395063 - 1395104 + g 81 -13.1 -2.60508 | gap 1, overlap 1395061 GCGGAGGTGAACCCG AGATCTCCCGTACAGAG-CG AAA CGACTCTGTATGGGAGCTCC AGTTTTTGAAGAATG Tpet_1405 1396846 - 1396076 - | ornithine carbamoyltransferase TERM 1492 1396801 - 1396821 + g 78 -4.7 -4.91459 | opp_overlap 1396801 GCAAATAGAAGAACA CCATTGTCA GGA TCACGATGG TTTTTATGAATCTTC Tpet_1406 1397631 - 1396843 - | binding-protein-dependent transport systems inner membrane component Tpet_1407 1398740 - 1397628 - | spermidine/putrescine ABC transporter ATPase subunit TERM 1493 1397891 - 1397913 + g 89 -9.2 -4.64598 | TCTTTTCGGGCCTCA GGGTGATG AGCAATA CATCACCC TTTTTCGCCTCCTTG TERM 1494 1398295 - 1398263 - G 79 -11.2 -3.35679 | opp_overlap 1398280, overlap 1398264 1398266 GCGGTTCATCGAGAA GGAGGACCCTCGGC TCGTT GGCGAGGGCCCTCG CTATCGCCACTCTCT TERM 1495 1398294 - 1398264 - G 86 -14.7 -2.61264 | opp_overlap 1398280, overlap 1398263 1398266 CGGTTCATCGAGAAG GAGGACCCTCGGC TCGTT GGCGAGGGCCCTC GCTATCGCCACTCTC TERM 1496 1398292 - 1398266 - G 74 -11.5 -2.8474 | opp_overlap 1398280, overlap 1398264 1398263 GTTCATCGAGAAGGA GGACCCTCGGC TCGTT GGCGAGGGCCC TCGCTATCGCCACTC Tpet_1408 1399759 - 1398749 - | extracellular solute-binding protein TERM 1497 1399807 - 1399788 - R 100 -11.4 -5.0916 | opp_overlap 1399788 CTTCCAATATAAAAA GCCAGGCC GTGT AGCCTGGC TCTCTGGAGGCGGCG TERM 1498 1399788 - 1399807 + r 75 -10.7 -2.87132 | opp_overlap 1399788 CTTCCAATATAAAAA GCCAGGC CGTGTA GCCTGGC TCTCTGGAGGCGGCG Tpet_1409 1400531 - 1399926 - | phosphoglycerate mutase TERM 1499 1400409 - 1400421 + g 81 -4.8 -5.17054 | overlap 1400406 ATCGACTCTTTCCAG GCTG TTTGC CAGC TTTTTTGCCTGTTCT Tpet_1410 1400579 - 1401565 + | hypothetical protein Tpet_1411 1401959 - 1401543 - | NifU family SUF system FeS assembly protein Tpet_1412 1403197 - 1401956 - | SufS subfamily cysteine desulfurase Tpet_1413 1404281 - 1403175 - | FeS assembly protein SufD Tpet_1414 1405686 - 1404292 - | FeS assembly protein SufB TERM 1500 1404574 - 1404598 + g 76 -7.8 -4.208 | opp_overlap 1404573, overlap 1404565 1404570 AGCCGCGCACTCAAC GGAGGCCTTG CTCTT CACGGCTTCC TTTGTGATTTTCAAA Tpet_1415 1406423 - 1405683 - | FeS assembly ATPase SufC TERM 1501 1406639 - 1406660 + H 91 -11.6 -4.08557 | TCCCCGGCACCACCC GGGCACCT CCAAAA AGGTGCCC TTCTTCTTTGAGGAG TERM 1502 1407041 - 1407021 - g 100 -12.6 -5.55855 | opp_overlap 1407019 1407018 CTGAAAAAAATAAAA GACGGCGA AAGAG TCGCCGTC AGATTTGCATCCTCA Tpet_1416 1406685 - 1407059 + | hypothetical protein Tpet_1417 1407324 - 1407040 - | flagellar hook-basal body complex subunit FliE TERM 1503 1407247 - 1407262 + g 86 -4.8 -5.48213 | overlap 1407235 TTCTTTCAGCGCTTC TGAAAA GTTG TTTTCA TTTTTCTTTTGAGTC Tpet_1418 1407753 - 1407331 - | flagellar basal-body rod protein FlgC Tpet_1419 1408133 - 1407750 - | flagellar basal-body rod protein FlgB Tpet_1420 1409178 - 1408150 - | peptide chain release factor 1 TERM 1504 1408422 - 1408445 + g 100 -9.6 -4.7458 | overlap 1408423 1408424 GTAGCTGGTAGAGTC TTGCTCTGAG GATC CTCAGAGCGG TTTGTTTGTTCTGAT TERM 1505 1408423 - 1408444 + g 79 -10.9 -3.43122 | overlap 1408422 1408424 TAGCTGGTAGAGTCT TGCTCTGAG GATC CTCAGAGCG GTTTGTTTGTTCTGA TERM 1506 1408424 - 1408443 + g 78 -12.2 -2.64788 | overlap 1408423 1408422 AGCTGGTAGAGTCTT GCTCTGAG GATC CTCAGAGC GGTTTGTTTGTTCTG TERM 1507 1409021 - 1409045 + g 100 -10.1 -4.94168 | opp_overlap 1409028 TTTTCTCCTTCTTCT CTCAAAAGTTC GAT GAACTCTTGAG TTTCTTTTATTCTGT Tpet_1421 1410278 - 1409196 - | twitching motility protein TERM 1508 1409329 - 1409366 + g 100 -9.9 -4.89519 | gap 1 AGGACCATTCCGTGT CTCGCACCAGCCTGTATC AGA GATTCGAGCTGGTG-GAG TTTGTTTTCTCTTAT TERM 1509 1409735 - 1409750 + g 86 -2.6 -5.72622 | gap 1 CTGAACCGAGTTCTC TCTGGTG AAT CAC-AGA TTTTTTGTTTGTGAA Tpet_1422 1413042 - 1410283 - | isoleucyl-tRNA synthetase TERM 1510 1410615 - 1410633 + g 74 -6 -4.62302 | overlap 1410614 GGGCCTTCAACACGT CTTCTCTT ATG GAGAGGAG TTTTTCGAAATCTTC TERM 1511 1412992 - 1413008 + g 72 -5.2 -4.59853 | GTTCACCAAGTTTGC CTTCAT CGGAA ATGAAG TTTTTGGCAAGTTCA Tpet_1423 1413414 - 1413064 - | response regulator receiver protein Tpet_1424 1415581 - 1413419 - | PAS/PAC sensor signal transduction histidine kinase TERM 1512 1414079 - 1414095 + g 83 -4.4 -5.37171 | overlap 1414067 1414066 CATCTCTCCCAGTAT GGAGAG CCTTT CTCTTC TTTTTCTTTCCTCTT TERM 1513 1415430 - 1415446 + g 70 -2.2 -5.00616 | opp_overlap 1415439, overlap 1415431 TAGACTTCTTCCGCA TCCAGA AATTC TCTGGC TTTTTTGAGGGAAAA Tpet_1425 1416122 - 1415628 - | hypothetical protein TERM 1514 1416830 - 1416808 - g 74 -11.4 -2.82279 | overlap 1416812 TCAGGAAATATACGA CGAAGAACTC GCT GAATTCTTCG GACTGGAGATCGGTA Tpet_1426 1416173 - 1417597 + | hypothetical protein TERM 1515 1417906 - 1417917 + G 72 -5.8 -4.45723 | TAACCTTCGTACTTG CGCT GGGA AGCG TTTTCATCTATTATT TERM 1516 1417998 - 1417965 - g 84 -7.5 -4.80289 | gap 1, opp_overlap 1417965 AGAAAAGACAGAAAA CCTCCT-AGAATCCTC AGG AAGGTCTCTTAGGAGG TGTTTGCGTGACAAT Tpet_1427 1417647 - 1417994 + | positive regulator of sigma E, RseC/MucC Tpet_1428 1418006 - 1418356 + | DRTGG domain-containing protein Tpet_1429 1418353 - 1419318 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Tpet_1430 1419299 - 1419610 + | hypothetical protein Tpet_1431 1419607 - 1420305 + | phosphotransferase domain-containing protein TERM 1517 1421177 - 1421195 + G 79 -7.5 -4.52589 | AGAACTCCTCACTCT CGAAGAA TTGAT TTCTTCG TTTTCTCTGGACAGG Tpet_1432 1420299 - 1421708 + | glutamyl-tRNA synthetase Tpet_1433 1421711 - 1422484 + | alpha/beta hydrolase fold Tpet_1434 1422486 - 1423502 + | hypothetical protein TERM 1518 1423596 - 1423584 - g 83 -4.1 -5.33405 | TTGAGGAAATAAAAA GCCTT TCG AAGAC GAATCTGGACAATGC TERM 1519 1424443 - 1424415 - g 100 -11.8 -5.52384 | TCGGCATGAAAAAAA GAGCAGCTTCGA TTTAT TTGAAGCTGCTC CAGAAACAGCCGGAA Tpet_1435 1423556 - 1424557 + | hypothetical protein Tpet_1436 1426002 - 1424554 - | inosine-5'-monophosphate dehydrogenase TERM 1520 1424619 - 1424636 + g 83 -9.9 -4.07885 | GTGGATGGCTTTCTT TCACTCC AGCT GGAGTGA TTTTCACGAAGACTG Tpet_1437 1427252 - 1426014 - | peptidase M16 domain-containing protein TERM 1521 1427199 - 1427178 - GR 86 -8 -4.8622 | gap 1, opp_overlap 1427178 CTTTTTAATTAAAAA GGCGCAGGA GATCG TCC-GCGCC TTGTCGAATGGTATG Tpet_1438 1429350 - 1427224 - | polynucleotide phosphorylase/polyadenylase TERM 1522 1427514 - 1427530 + gr 71 -4.3 -4.64334 | TTTCCCTTATGAGTT CGATGGC CTT GTCAACG TTTTCTTCAGAACTT TERM 1523 1428638 - 1428626 - GR 75 -9.1 -3.57883 | opp_overlap 1428619, overlap 1428617 AGAAGATCTTTGAAA GCCTC AAC GAGGC CTTCAGGTGGTGTGG TERM 1524 1429030 - 1429041 + gr 77 -2.2 -5.40072 | CACGATAACCTGGAC CTCG TTTC TGAG TTTTTTTGGAAAGAG TERM 1525 1429412 - 1429382 - R 77 -8.9 -3.81027 | opp_overlap 1429382, overlap 1429385 1429389 CCCAATCAATTTAAA TCAGGAAGCGGGC AACAA GCCCGCTTCCCCC TCCTTAGAATTTTAT TERM 1526 1429409 - 1429385 - R 100 -17.2 -2.98436 | opp_overlap 1429382, overlap 1429382 1429389 AATCAATTTAAATCA GGAAGCGGGC AACAA GCCCGCTTCC CCCTCCTTAGAATTT TERM 1527 1429405 - 1429389 - R 80 -10.8 -3.33885 | opp_overlap 1429382, overlap 1429385 1429382 AATTTAAATCAGGAA GCGGGC AACAA GCCCGC TTCCCCCTCCTTAGA Tpet_1439 1429696 - 1429424 - | ribosomal protein S15 TERM 1528 1429801 - 1429776 - R 93 -8.9 -4.95758 | opp_overlap 1429781, overlap 1429781 ATTATACCACAAAAA CATACCCCGGC ATGT GCCGGGTTGTG GAGCGGGCGACGGGA TERM 1529 1429796 - 1429781 - R 79 -11.8 -2.7648 | opp_overlap 1429781, overlap 1429776 ACCACAAAAACATAC CCCGGC ATGT GCCGGG TTGTGGAGCGGGCGA TERM 1530 1429781 - 1429796 + r 85 -11.8 -3.28712 | opp_overlap 1429781 1429776 ACCACAAAAACATAC CCCGGC ATGT GCCGGG TTGTGGAGCGGGCGA TERM 1531 1429833 - 1429849 + r 74 -10.9 -2.62616 | TCGAACCCGCGACCC CCAGCTT GGG AAGCTGG TGCTCTACCAGCTGA TERM 1532 1430094 - 1430070 - R 71 -9.2 -3.28912 | opp_overlap 1430070 1430073, overlap 1430072 1430073 CCAGATCGATATGAA CAGCCCGGCC GTTTT GGCCGGGTTA TTTTGTTTTTATGGG TERM 1533 1430070 - 1430094 + r 100 -9.9 -5.35224 | opp_overlap 1430070 1430072 1430073, overlap 1430073 CCAGATCGATATGAA CAGCCCGGCCG TTT TGGCCGGGTTA TTTTGTTTTTATGGG TERM 1534 1430092 - 1430072 - R 72 -9.6 -3.20841 | opp_overlap 1430070 1430073, overlap 1430070 1430073 AGATCGATATGAACA GCCCGGCC GTTTT GGCCGGGT TATTTTGTTTTTATG TERM 1535 1430091 - 1430073 - R 84 -13.1 -2.52023 | opp_overlap 1430070 1430073, overlap 1430072 1430070 GATCGATATGAACAG CCCGGCC GTTTT GGCCGGG TTATTTTGTTTTTAT TERM 1536 1430073 - 1430091 + r 100 -13.8 -4.72545 | opp_overlap 1430073 1430072 1430070, overlap 1430070 GATCGATATGAACAG CCCGGCCG TTT TGGCCGGG TTATTTTGTTTTTAT Tpet_1440 1430601 - 1430212 - | hypothetical protein Tpet_1441 1431346 - 1430654 - | hypothetical protein Tpet_1442 1432322 - 1431348 - | Rieske (2Fe-2S) domain-containing protein TERM 1537 1432409 - 1432396 - H 74 -3.1 -5.09426 | overlap 1432397 TGGAATTGGAAAAAA CGAGA GTGA TCTCA GAACGGTCGAATGAG Tpet_1443 1432437 - 1432739 + | hypothetical protein TERM 1538 1432748 - 1432768 + F 100 -12.5 -5.8096 | opp_overlap 1432748 TGAATGAATAGGGAA GCCCGGTCG AAA TGGCCGGGC TTTTTGTTTTTTATG TERM 1539 1432768 - 1432748 - f 72 -9.6 -3.21806 | opp_overlap 1432748 TGAATGAATAGGGAA GCCCGGTC GAAAT GGCCGGGC TTTTTGTTTTTTATG Tpet_1444 1433102 - 1433878 + | hypothetical protein TERM 1540 1433879 - 1433899 + T 75 -9 -3.64703 | CTTGGTTGGCAGTGA GGTGAGCC TTTGT GGCTTACC TTTGAATCAAAGAAG TERM 1541 1434011 - 1434044 + T 81 -6.1 -4.89477 | opp_overlap 1434015 1434020, overlap 1434014 1434015 AAAATCACTCACAAC CAAAGAAAAGGAGTA GTAA TGCTCCTTTTCGTTA TTTTATTATTAGGAG TERM 1542 1434014 - 1434041 + T 82 -7.8 -4.54297 | opp_overlap 1434015 1434020, overlap 1434011 1434015 ATCACTCACAACCAA AGAAAAGGAGTA GTAA TGCTCCTTTTCG TTATTTTATTATTAG TERM 1543 1434040 - 1434015 - T 80 -9.1 -4.00868 | opp_overlap 1434015 1434014 1434011, overlap 1434020 TCACTCACAACCAAA GAAAAGGAGTA GTAA TGCTCCTTTTC GTTATTTTATTATTA TERM 1544 1434015 - 1434040 + T 83 -11.3 -3.30952 | opp_overlap 1434015 1434020, overlap 1434014 1434011 TCACTCACAACCAAA GAAAAGGAGTA GTAA TGCTCCTTTTC GTTATTTTATTATTA TERM 1545 1434035 - 1434020 - T 72 -3.2 -5.02357 | opp_overlap 1434015 1434014 1434011, overlap 1434015 CACAACCAAAGAAAA GGAGTA GTAA TGCTCC TTTTCGTTATTTTAT Tpet_1445 1435303 - 1434131 - | major facilitator transporter Tpet_1446 1437247 - 1435319 - | hypothetical protein TERM 1546 1435721 - 1435738 + g 82 -7.7 -4.63932 | overlap 1435720 TCTTTTCATGGGTAC GAGAGTG TTTT CGCTCTC TTTTATTGACAGGTA TERM 1547 1436816 - 1436828 + g 78 -4.8 -4.98857 | TCCATCTATCACCAT GCTC AAACA GAGC TTTTTGTGCTTCACT TERM 1548 1437205 - 1437186 - G 100 -12.2 -4.43501 | AATTCATCGAGAAAA TCAGCCAG TATC CTGGCTGA AAGACCATATTCATC Tpet_1447 1439024 - 1437240 - | radical SAM domain-containing protein TERM 1549 1438475 - 1438462 - G 70 -2.3 -5.00616 | CCCGTTTGGAAAAAA CCGTG AATA CAAGG CACGTAAATCCCTTC TERM 1550 1438713 - 1438734 + g 79 -10.3 -3.55801 | opp_overlap 1438712 1438711 CAATGGTATAGAACC TGCTTTCAA TATT TTGAAAGCA TTTAACACGATTCCT Tpet_1448 1439610 - 1439413 - | hypothetical protein Tpet_1449 1439765 - 1441327 + | hypothetical protein Tpet_1450 1441871 - 1441437 - | hypothetical protein Tpet_1451 1442251 - 1441868 - | helix-turn-helix domain-containing protein Tpet_1452 1442616 - 1442374 - | hypothetical protein Tpet_1453 1444444 - 1442729 - | ABC transporter related Tpet_1454 1445167 - 1444451 - | ABC transporter related Tpet_1455 1445989 - 1445177 - | ABC-2 type transporter Tpet_1456 1447515 - 1446151 - | radical SAM domain-containing protein Tpet_1457 1448824 - 1447496 - | radical SAM domain-containing protein Tpet_1458 1449641 - 1449120 - | hypothetical protein Tpet_1459 1449844 - 1449653 - | hypothetical protein Tpet_1460 1450557 - 1449841 - | ABC transporter related Tpet_1461 1451192 - 1450674 - | Fe-S oxidoreductase-like protein TERM 1551 1452698 - 1452680 - H 86 -2.4 -5.67967 | overlap 1452685 ATCATCAGAAAAAAA TAAAAGGA TTC TCCCTCCA TCAGAGACAAATCCT TERM 1552 1452712 - 1452685 - H 81 -2.1 -5.61277 | gap 1, overlap 1452680 CAGAAAAAAATAAAA GGATTC-TCCCT CCATC AGAGACAAATCC TTTTTCTTTCCACCT TERM 1553 1452769 - 1452751 - H 77 -6.8 -4.52589 | CTTCTTGATAGAAAA TTCCTTTC AAG GAAAGAAA GACTCAAAAAGGTAT Tpet_1463 1453240 - 1453467 + | hypothetical protein Tpet_1465 1455424 - 1453730 - | ABC transporter related TERM 1554 1453756 - 1453774 + g 78 -6.7 -4.68424 | opp_overlap 1453756 ATTGACTCCTTACAA TCTCCCT GTAAA GGGGAGA TTTTTCCATGAGTTC TERM 1555 1454703 - 1454687 - G 78 -6.5 -4.58283 | opp_overlap 1454687, overlap 1454675 CAATCCGTTTAAAAA CGGATAG AGA CTCTCCG TTTTCGCCACCACAT Tpet_1466 1457162 - 1455444 - | ABC transporter related TERM 1556 1456522 - 1456509 - G 70 -5.3 -4.4727 | CGAAGATCCAGAAAA CTGTT TGAG AACAG GAATTCCTTCCACCA Tpet_1467 1458559 - 1457168 - | radical SAM domain-containing protein TERM 1557 1458637 - 1458605 - R 100 -21.4 -3.14344 | opp_overlap 1458592, overlap 1458592 1458635 1458636 GAGCCTCTTGATGAA CCCCTTCCCCTGGC CTTTC GCCAGGGGAAAGGG AAAAAAGCGGCTGCT Tpet_1468 1459006 - 1458833 - | hypothetical protein TERM 1558 1459815 - 1459802 - g 74 -3.8 -4.92363 | AAAGATCCAGAAAAA GCCA AAGATA TGGC AGAAGAAGCACTCTA TERM 1559 1460065 - 1460042 - g 85 -6.8 -5.02287 | opp_overlap 1460042, overlap 1460035 1460037 1460044 TACAAAAACACAAAA TCTCTCCAGA GATT TCTGAAGAAA AACACCACATCCATC Tpet_1469 1459193 - 1460800 + | helix-turn-helix domain-containing protein Tpet_1470 1460897 - 1461115 + | hypothetical protein Tpet_1471 1461112 - 1461342 + | YcfA family protein Tpet_1472 1461365 - 1461577 + | hypothetical protein Tpet_1474 1463022 - 1462252 - | ABC-2 type transporter Tpet_1476 1463621 - 1463475 - | hypothetical protein Tpet_1477 1464484 - 1463678 - | ABC-2 type transporter Tpet_1478 1465239 - 1464478 - | ABC-2 type transporter TERM 1560 1464989 - 1465010 + gr 70 -5.1 -4.39998 | GGAGCAAGTACCACG GAGATGAGG GCAC CTTCTTCTC TTTCTTCTGTGAATC TERM 1561 1465063 - 1465045 - GR 79 -8.9 -3.9392 | TCCCACCCCAAAGAA GTACTGG TTCAG CCAGTAC CAGAGCAGGGCTCCT Tpet_1479 1465966 - 1465190 - | ABC transporter related TERM 1562 1465548 - 1465570 + gr 90 -9.9 -4.45693 | overlap 1465565 AACTTTTTCCTCATG CCCGTTGAA AACTC TTCGACGGG TTTGTCTTTGTATTC Tpet_1480 1467291 - 1465963 - | radical SAM domain-containing protein TERM 1563 1467353 - 1467368 + r 75 -9 -3.65426 | opp_overlap 1467353 GATATTCCTAATAGA GAAGGC GGCC GCCTTC TTTAAAAATTTCTAA Tpet_1481 1467716 - 1467477 - | hypothetical protein TERM 1564 1467512 - 1467523 + g 74 -5.8 -4.63932 | opp_overlap 1467512 CATTCGATATTAGAA GCCT CGCG AGGC TTTTATTAAACCGTA TERM 1565 1467686 - 1467709 + g 72 -6.1 -4.2679 | opp_overlap 1467686 AGAGCAGAATAACTA TTGTGAGAA TGATCC TTCTCACGA TTTTCATCCCCCTTC Tpet_1483 1469201 - 1468344 - | aldo/keto reductase Tpet_1484 1469308 - 1469973 + | ribonuclease H Tpet_1485 1470873 - 1470142 - | beta-lactamase domain-containing protein Tpet_1486 1472954 - 1470870 - | RND efflux transporter TERM 1566 1472408 - 1472391 - G 72 -8.5 -3.77846 | opp_overlap 1472390 1472393 CAGAAGATAGCGAAA TATCTGG TCTT CCAGATA CTGTGTTCCAGAGAG Tpet_1487 1473006 - 1473629 + | methyltransferase type 11 Tpet_1488 1473977 - 1473630 - | cupin 2 domain-containing protein TERM 1567 1474678 - 1474643 - g 72 -10.5 -2.79183 | opp_overlap 1474643 1474642 1474645 1474672, overlap 1474646 GGGATGTGGATCAGA GAACCCGGTGAAATG GAAAAA CTTTTCACCAGGCTC GTTCCTGTTTACAGG TERM 1568 1474678 - 1474697 + G 78 -6.4 -4.57569 | overlap 1474642 1474672 1474680 ACTTTTCACCAGGCT CGTTCCTG TTTA CAGGAAAG TTTTTGAAGAACTCG TERM 1569 1474882 - 1474905 + G 73 -4.6 -4.86731 | gap 1, overlap 1474885 GTCTTATGTGTCCCT TCC-TGTGAAG GGC CTTCACCTGGA TTTTGTTTCAAACAC Tpet_1489 1474148 - 1476355 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1570 1476429 - 1476457 + T 100 -11.7 -5.86061 | opp_overlap 1476431 1476433, overlap 1476433 CGTTGGCCGACCAAA AACAGGAGGGGGA ATT TCCCCCTCCTTTG TTTTTTTTACTCCAG TERM 1571 1476455 - 1476431 - T 100 -14.3 -4.72272 | opp_overlap 1476429 1476433, overlap 1476433 TTGGCCGACCAAAAA CAGGAGGGGGA ATT TCCCCCTCCTT TGTTTTTTTTACTCC TERM 1572 1476433 - 1476453 + T 100 -16.9 -5.36018 | opp_overlap 1476431 1476433, overlap 1476429 GGCCGACCAAAAACA GGAGGGGGA ATT TCCCCCTCC TTTGTTTTTTTTACT TERM 1573 1476453 - 1476433 - T 100 -16.9 -3.98256 | opp_overlap 1476433 1476429, overlap 1476431 GGCCGACCAAAAACA GGAGGGGGA ATT TCCCCCTCC TTTGTTTTTTTTACT Tpet_1490 1477711 - 1476464 - | glycoside hydrolase family protein TERM 1574 1476571 - 1476561 - G 71 -6.8 -4.07246 | opp_overlap 1476560 GGATGGGAAAGCAAA GCCT TCA AGGC GAGTTTTTTCGATCT Tpet_1491 1478667 - 1477708 - | ATPase, BadF/BadG/BcrA/BcrD type TERM 1575 1478929 - 1478953 + G 100 -11.5 -4.86731 | opp_overlap 1478947, overlap 1478949 1478951 TCTGGGGGATTTCAT GTTTACCCTTG AGA CAAGGGTAGGC TTTTCTTTAAAACCC Tpet_1492 1478714 - 1479091 + | hypothetical protein Tpet_1493 1479095 - 1481368 + | MutS2 family protein TERM 1576 1482662 - 1482644 - g 71 -3.8 -4.83759 | overlap 1482645 1482660 AACTAAACGGAAAAA CTCTCTTG AGG CCAAAGAG AAGAACCTCCGTGAA Tpet_1494 1481365 - 1483359 + | cell division protein FtsA TERM 1577 1483377 - 1483356 - T 100 -10.1 -5.37593 | overlap 1483357 GTTCAAAGTAAAAAA GTGAGGGGG CCGG CCCCCTCAG ATAATAGCCTTCTCC TERM 1578 1483376 - 1483357 - T 100 -13.6 -3.81472 | overlap 1483356 TTCAAAGTAAAAAAG TGAGGGGG CCGG CCCCCTCA GATAATAGCCTTCTC Tpet_1495 1484477 - 1483374 - | ABC transporter related TERM 1579 1484069 - 1484084 + g 72 -5.4 -4.52589 | TCTGCCTCTGACCAC CTGAGA GCTG TCTCGG TTTTCTGTCGAGCAG TERM 1580 1484327 - 1484347 + g 84 -8.3 -4.56597 | TCTCCTCCAGTCCTG CGATCATTC TCA GAGTGGTCG TTTTTCCACAACCGG TERM 1581 1484379 - 1484412 + g 72 -5.3 -4.56597 | gap 1, opp_overlap 1484379 1484381 1484385, overlap 1484372 1484369 1484381 TGGTCCAAGGAGAAC CACGAA-CTCCTTGTC TTC GACGACGAGATTCGCG TTTTTCACAGCGACG Tpet_1496 1484743 - 1484480 - | prevent-host-death family protein TERM 1582 1484837 - 1484814 - R 100 -11.8 -5.7946 | opp_overlap 1484814, overlap 1484794 TTTCGAACAAAAAAA CGGGGATATC GAGA AATATCCCCG TTTATTGAAGAATAT TERM 1583 1484814 - 1484837 + r 88 -11.1 -4.16284 | opp_overlap 1484794 1484814 TTTCGAACAAAAAAA CGGGGATAT CGAGAA ATATCCCCG TTTATTGAAGAATAT Tpet_1497 1485601 - 1484864 - | hypothetical protein TERM 1584 1485617 - 1485580 - G 83 -2.1 -5.69262 | gap 1, opp_overlap 1485609, overlap 1485589 1485609 CCACAAAAATAAAAA GAAGAGGAA-GAAACTTT TTC AAAATATCACTCCCCCTC GAGGAGTTTTTGAAT TERM 1585 1485609 - 1485623 + r 74 -5.6 -4.68994 | opp_overlap 1485580 1485609 TTTTTCAAAATATCA CTCCCC CTC GAGGAG TTTTTGAATGATCCT gatB 1487054 - 1485606 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1586 1486056 - 1486070 + g 72 -8.6 -3.73775 | overlap 1486047 CACACACTCTTCGAA GAACTC GGC GAGTTC TTTACTCGAGGTGAG Tpet_1499 1488469 - 1487051 - | glutamyl-tRNA(Gln) amidotransferase, A subunit Tpet_1500 1488685 - 1489206 + | hypothetical protein TERM 1587 1489220 - 1489251 + T 82 -7.2 -4.59853 | opp_overlap 1489228, overlap 1489228 1489240 AATCTCCTCTCCAGA GACAAAAAGCCCCC GTCC GGGGGCTTTAAATC TTTTTAAGCGCTTGA TERM 1588 1489243 - 1489228 - T 100 -11.8 -5.03994 | opp_overlap 1489220 1489228 1489240 CTCCAGAGACAAAAA GCCCCC GTCC GGGGGC TTTAAATCTTTTTAA TERM 1589 1489228 - 1489243 + T 93 -11.8 -3.88464 | opp_overlap 1489228, overlap 1489220 1489240 CTCCAGAGACAAAAA GCCCCC GTCC GGGGGC TTTAAATCTTTTTAA Tpet_1501 1490384 - 1489245 - | cystathionine gamma-lyase Tpet_1502 1491481 - 1490435 - | biotin synthase TERM 1590 1491255 - 1491284 + g 75 -2.9 -5.24129 | overlap 1491256 CTTTTCAAATTCTTG TTGTCTCTTCT CAGACCGC AGTAGAGACAG TTTTTTCTGCACACG Tpet_1503 1491733 - 1491488 - | hypothetical protein TERM 1591 1491600 - 1491625 + g 95 -13.3 -3.66139 | opp_overlap 1491568 TCTACGAGAAGTTCG GCGGGAAGGAA CTTT TCCCTTCCCGC TTTGAGATCTCTGTA thiH 1493141 - 1491720 - | thiamine biosynthesis protein ThiH Tpet_1505 1493389 - 1493141 - | hypothetical protein TERM 1592 1493425 - 1493398 - R 100 -12 -4.67038 | gap 1, opp_overlap 1493393 1493399 1493405, overlap 1493399 TCTCCAAAACGAAAA CCCCCTCTCCACG TGC CG-GGAGAGGGGT ATACTTCCATCCATC TERM 1593 1493399 - 1493424 + r 93 -15.5 -2.92371 | gap 1, opp_overlap 1493398 1493399, overlap 1493393 1493405 CTCCAAAACGAAAAC CCCCTCTCCACG TGC CG-GGAGAGGGG TATACTTCCATCCAT TERM 1594 1493424 - 1493399 - R 100 -15.5 -3.395 | gap 1, opp_overlap 1493399 1493393 1493405, overlap 1493398 CTCCAAAACGAAAAC CCCCTCTCCACG TGC CG-GGAGAGGGG TATACTTCCATCCAT TERM 1595 1493466 - 1493481 + r 70 -6.1 -4.2928 | GTGTCAGGATTTTCC CCTCC ACCTCA GGAGG TTTGTGATTTTTCTC Tpet_1506 1494693 - 1493530 - | AAA ATPase TERM 1596 1493602 - 1493617 + g 79 -4 -5.20606 | ATCGTCCCTTATCAC GAAGTC ACTC GATTTC TTTTTCTTGCTCTTT TERM 1597 1493806 - 1493820 + g 88 -8.6 -4.90296 | opp_overlap 1493800 1493818, overlap 1493818 TAAGAAGATCTTTTC CCCTTT TGA AAAGGG TTTTTCTACCCTTTT TERM 1598 1493818 - 1493831 + g 81 -3.8 -5.40072 | opp_overlap 1493818, overlap 1493806 TTCCCCTTTTGAAAA GGGT TTTTCT ACCC TTTTTTTCCGCACGA TERM 1599 1494587 - 1494625 + g 74 -3.3 -5.00616 | gap 2, overlap 1494588 AGGATCGCCCTGTTT G-TGAATCTCTT-TTCCAG ATC CTGGAAAAAGAGACGCATC TTTTTTGAAAGAAAA TERM 1600 1494588 - 1494623 + g 71 -7 -4.13561 | gap 1, overlap 1494587 GGATCGCCCTGTTTG TGAATCTCTT-TTCCAG ATC CTGGAAAAAGAGACGCA TCTTTTTTGAAAGAA TERM 1601 1494747 - 1494731 - H 80 -7.3 -4.5265 | opp_overlap 1494730 1494731 AATTATAGCACAAAA CGTTCTC AAA AAGAACG ATTTTTCGTAGAATT TERM 1602 1494820 - 1494802 - H 77 -7.5 -4.39426 | GATAGTCTCACAAAA TCGTTCT CTTTC AGAACGA AGAGTCGGCTTAACA Tpet_1507 1494918 - 1495742 + | phosphate binding protein TERM 1603 1495866 - 1495894 + G 89 -10.9 -4.10925 | overlap 1495873 GATCAGGGAAGCCTG GCCCGCCCTCG TGGAAAT CGGGGGCGAGC TTTTCACGAGTATCT Tpet_1508 1495792 - 1496619 + | binding-protein-dependent transport systems inner membrane component TERM 1604 1496710 - 1496734 + G 73 -2.2 -5.18357 | gap 1, overlap 1496714 TACTGGTTCTCGCTG GAGGGGTGAAG TACT TTTCA-CCTTC TTTTTTCCTGGATTA TERM 1605 1496714 - 1496731 + G 78 -6.3 -4.67552 | overlap 1496710 GGTTCTCGCTGGAGG GGTGAAG TACT TTTCACC TTCTTTTTTCCTGGA Tpet_1509 1496616 - 1497446 + | phosphate ABC transporter, inner membrane subunit PstA Tpet_1510 1497430 - 1498185 + | phosphate ABC transporter, ATPase subunit Tpet_1511 1498200 - 1498898 + | phosphate uptake regulator, PhoU Tpet_1512 1498873 - 1499553 + | two component transcriptional regulator Tpet_1513 1499540 - 1500493 + | histidine kinase Tpet_1514 1502321 - 1500486 - | ATPase-like protein TERM 1606 1500903 - 1500916 + g 78 -5.3 -5.01422 | GAAAACGGGCTGGGT GAAAC CGCT GTTTC TTTCTTTTTCTCTCA Tpet_1515 1504059 - 1502326 - | ABC transporter related TERM 1607 1503468 - 1503500 + gr 70 -10 -2.53846 | gap 1, opp_overlap 1503474, overlap 1503467 TTTCTTCGGTGAACC CGGAAAGTTCCGAGA AGGA TCTCTGAAC-TTCCG ATACTTTTCTGTGTA Tpet_1516 1505167 - 1504034 - | aminotransferase, class I and II TERM 1608 1504527 - 1504513 - GH 76 -8.6 -3.87869 | opp_overlap 1504513 CGAATCCTTCAGAAA CATCGA GTA TCGATG TGAATTCATCCGTGT Tpet_1517 1505276 - 1505926 + | HAD family hydrolase Tpet_1518 1507640 - 1505910 - | NAD+ synthetase TERM 1609 1505982 - 1505999 + gT 82 -6.9 -4.79373 | overlap 1505985 TCTCGTGGAGATCTT CACGCCG ATAG CGGCCTG TTTTCTCTTGTATTC Tpet_1519 1508181 - 1507606 - | hypothetical protein Tpet_1520 1509119 - 1508184 - | phosphoribosylaminoimidazole synthetase TERM 1610 1508848 - 1508838 - G 74 -8.2 -3.9009 | AAGGTAGTCCAGAAA GGCC ACA GGCC TCGCTCCCACGCAGA Tpet_1521 1510309 - 1509116 - | phosphoribosylamine--glycine ligase TERM 1611 1509595 - 1509614 + g 76 -5 -4.79223 | overlap 1509589 1509597 CTCCCCACAGAGTCT TATCGAAG AGCT CTTCGATC TTTTTGATCGTATCG TERM 1612 1509597 - 1509612 + g 71 -7.6 -4.01045 | overlap 1509589 1509595 CCCCACAGAGTCTTA TCGAAG AGCT CTTCGA TCTTTTTGATCGTAT Tpet_1522 1511680 - 1510322 - | IMP cyclohydrolase TERM 1613 1510843 - 1510865 + g 74 -5.5 -4.68424 | opp_overlap 1510842 1510843 CCTGTGTGAAGGAAG GTGCCACGA TCACC TCGAGGTAC TTTTTCAATGACTTC Tpet_1523 1512269 - 1511661 - | phosphoribosylglycinamide formyltransferase Tpet_1524 1513534 - 1512239 - | amidophosphoribosyltransferase Tpet_1525 1515344 - 1513539 - | phosphoribosylformylglycinamidine synthase II Tpet_1526 1515991 - 1515350 - | phosphoribosylformylglycinamidine synthase I TERM 1614 1515706 - 1515688 - G 95 -14.6 -3.65581 | opp_overlap 1515686 1515685 ACGAATTTTGAAGAA GGGCTCCT CTC AGGAGCCC CATCTCTATGAGAAT Tpet_1527 1516236 - 1515988 - | phosphoribosylformylglycinamidine synthase, purS Tpet_1528 1516904 - 1516212 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1615 1516444 - 1516434 - G 80 -5.4 -5.00616 | CGCCCTTTCAAAAAA CTCT TTG AGAG CAAGAGTGGCCTTCA TERM 1616 1517020 - 1516989 - H 84 -4.5 -5.42862 | gap 2, overlap 1516996 1516997 ACACTTTGAAAAAAA CAGAAAAGCGGGAGC CCTT GCTCCCG-T-CCCTG GTCGGGGAGGCGGGA TERM 1617 1517015 - 1516996 - H 93 -9.2 -5.11475 | overlap 1516989 1516997 GAAAAAAACAGAAAA GCGGGAGC CCTT GCTCCCGT CCCTGGTCGGGGAGG TERM 1618 1517014 - 1516997 - H 95 -12.7 -3.63225 | overlap 1516996 1516989 AAAAAAACAGAAAAG CGGGAGC CCTT GCTCCCG TCCCTGGTCGGGGAG Tpet_1529 1517222 - 1517644 + | hypothetical protein TERM 1619 1517691 - 1517701 + G 74 -5.4 -4.67904 | overlap 1517679 GTCTTCCCAACGCGG GGAA ATC TTCC TTTTTCAACTTCCTG TERM 1620 1517958 - 1517983 + G 73 -10.5 -2.98714 | opp_overlap 1517977, overlap 1517957 ATGTTATAGCCCATG TCGTCCGTCTT TTTG AAGACGGAAGA GTTTCTCATCCGTAT Tpet_1530 1517663 - 1518736 + | translation-associated GTPase Tpet_1531 1518729 - 1519097 + | acid phosphatase/vanadium-dependent haloperoxidase related TERM 1621 1520076 - 1520058 - g 74 -3.8 -5.00884 | ATGCTTCCGAAAAAA TCCGTTCC AAA AGAACTGA AGCCGGTAAAGAAGG TERM 1622 1520315 - 1520329 + G 70 -5 -4.3898 | overlap 1520303 CGAGAGCGCCCACGT GAAGGA CGT TCTTTC TTTTCTCAGAATCGT Tpet_1532 1519107 - 1521053 + | UvrD/REP helicase Tpet_1533 1522125 - 1521058 - | radical SAM domain-containing protein TERM 1623 1521185 - 1521161 - G 82 -12.9 -3.01712 | CTGGTGGTTGGAAGA TCGCTCATCAG GTG CTGAGGAGCGA ACGCAAGGAGAACAA Tpet_1534 1522251 - 1523543 + | extracellular solute-binding protein TERM 1624 1523571 - 1523550 - f 77 -11.5 -2.52623 | opp_overlap 1523551, overlap 1523549 1523547 CTCTTCTGATAATAC CGGGGTGGG GATC CCCACCCCT TTTCCGGGGGTGCAT TERM 1625 1523551 - 1523570 + F 100 -15 -4.08767 | opp_overlap 1523550 1523549 1523547 TCTTCTGATAATACC GGGGTGGG GATC CCCACCCC TTTTCCGGGGGTGCA TERM 1626 1523596 - 1523607 + G 75 -3 -5.14626 | GTGCATCATGAGAGG GAAA TGGA TTTC TTTTCTTTTGATCCT Tpet_1535 1523588 - 1524433 + | binding-protein-dependent transport systems inner membrane component TERM 1627 1524431 - 1524451 + G 85 -5.5 -5.30616 | overlap 1524434 CTGGAGGGGGCACGA TGATGAAGA GGT TCTTCATTG TTTTTCTTTCGGTGA TERM 1628 1524434 - 1524448 + G 80 -7.2 -4.72696 | overlap 1524431 GAGGGGGCACGATGA TGAAGA GGT TCTTCA TTGTTTTTCTTTCGG TERM 1629 1525146 - 1525170 + G 74 -7.1 -4.3587 | opp_overlap 1525148, overlap 1525133 GTTCGCTGCGGGAAC GATCATGGCCG TTC CTGCGATGATC TTTATATTCTTCATA Tpet_1536 1524430 - 1525227 + | binding-protein-dependent transport systems inner membrane component Tpet_1537 1525241 - 1526308 + | ABC transporter related TERM 1630 1527169 - 1527195 + G 81 -12.4 -3.15961 | opp_overlap 1527168 TTGAAAATGAACGAT CTTCTCTCTGTT TTG AACGGAGAGGAG TTAAGTGATCTTTTC TERM 1631 1528689 - 1528674 - g 74 -3.3 -4.93365 | TCTGAGAACGAAAAA GGAAA TAGAAC TTTCC CTTCAGTATCTGATA Tpet_1538 1526305 - 1528803 + | glycoside hydrolase family protein TERM 1632 1529075 - 1529058 - g 85 -5.5 -5.27335 | overlap 1529060 TTCTTGAAAGAAAAA GAGGAAG AGCT CTTCCAC ATCCTGAACGAAGCC TERM 1633 1529073 - 1529060 - g 72 -6.7 -4.27026 | overlap 1529058 CTTGAAAGAAAAAGA GGAAG AGCT CTTCC ACATCCTGAACGAAG TERM 1634 1529511 - 1529494 - g 79 -4.1 -5.24796 | overlap 1529497 TCGATAGAAGAAAAA CGATCGA ACTT TCGATAG ATGTGGTGTCACTTC Tpet_1539 1528800 - 1530083 + | glycosyl transferase, group 1 Tpet_1540 1530080 - 1531222 + | glycosyl transferase family protein Tpet_1541 1531206 - 1532006 + | RpiR family transcriptional regulator Tpet_1542 1532164 - 1534167 + | carbohydrate binding module 27 Tpet_1543 1534170 - 1535150 + | glycosidase, PH1107-related TERM 1635 1535282 - 1535270 - g 72 -5.5 -4.4078 | overlap 1535271 TCGGTCTAACCAAAA CCACC GTT GGTGA GATCGCAAAGATCTT Tpet_1544 1535164 - 1536270 + | ROK family protein TERM 1636 1536500 - 1536481 - g 88 -7.8 -5.05113 | opp_overlap 1536480 TTGAGAGAAACAAAA CGCTCTAC TGGG GTGGAGCG CTGTGGTCTCCTCCA TERM 1637 1537152 - 1537164 + G 71 -6.9 -4.07687 | AGCAACTTCTTCCTG CCGGG TGT TCCGG TTTTGAAGAAAGCAT TERM 1638 1537566 - 1537588 + G 80 -12.8 -3.02263 | overlap 1537568 CCGTACGGATGGACC GACTGGATGG TTT CTATCCAGTC TATTGCAGAAGATCT TERM 1639 1537568 - 1537586 + G 70 -9.6 -3.06815 | overlap 1537566 GTACGGATGGACCGA CTGGATGG TTT CTATCCAG TCTATTGCAGAAGAT Tpet_1545 1536402 - 1538075 + | extracellular solute-binding protein TERM 1640 1538109 - 1538078 - f 89 -8.6 -4.62054 | opp_overlap 1538084, overlap 1538081 1538082 TGAAGCAAAGTAAAA TGATGACCCCGCCC CGAG GGGCGGGGTTTTAA AAAAAGAAGGAGGTA TERM 1641 1538106 - 1538081 - f 74 -10.3 -3.22917 | opp_overlap 1538084, overlap 1538078 1538082 AGCAAAGTAAAATGA TGACCCCGCCC CGAG GGGCGGGGTTT TAAAAAAAGAAGGAG TERM 1642 1538105 - 1538082 - f 86 -13.8 -2.52666 | opp_overlap 1538084, overlap 1538081 1538078 GCAAAGTAAAATGAT GACCCCGCCC CGAG GGGCGGGGTT TTAAAAAAAGAAGGA TERM 1643 1538084 - 1538103 + F 100 -16.4 -4.07568 | opp_overlap 1538082 1538081 1538078 AAAGTAAAATGATGA CCCCGCCC CGAG GGGCGGGG TTTTAAAAAAAGAAG Tpet_1546 1538131 - 1539120 + | binding-protein-dependent transport systems inner membrane component Tpet_1547 1539117 - 1539974 + | binding-protein-dependent transport systems inner membrane component TERM 1644 1540179 - 1540157 - g 90 -13.5 -3.53811 | TTGATCCTTTTGAAA CCTCCCATG AAGTA CATGGGAGG AGAAGCGATCCTCGA Tpet_1548 1539971 - 1540951 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpet_1549 1540948 - 1541895 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1645 1541992 - 1541977 - g 70 -9 -3.41795 | AAATGGTTATGATAA CGTCTC GGAA GAGACG AGAAAGAGAGTAATC TERM 1646 1542086 - 1542103 + G 72 -9.1 -3.64703 | ACTATAGGAGTTCTC GTCCCCA ACTT TGGGGGC TTTCACTACAACGAG Tpet_1550 1541897 - 1542883 + | periplasmic binding protein/LacI transcriptional regulator TERM 1647 1542908 - 1542881 - f 83 -12.8 -3.02371 | opp_overlap 1542886, overlap 1542886 TCCGTGAAACAACTA TAAAAGCCCCTC CGAA GAGGGGCTTTTT CATCTTTCCTTTCTC TERM 1648 1542903 - 1542886 - f 100 -12.7 -4.64157 | opp_overlap 1542886, overlap 1542881 GAAACAACTATAAAA GCCCCTC CGAA GAGGGGC TTTTTCATCTTTCCT TERM 1649 1542886 - 1542903 + F 100 -12.7 -4.946 | opp_overlap 1542881 1542886 GAAACAACTATAAAA GCCCCTC CGAA GAGGGGC TTTTTCATCTTTCCT Tpet_1552 1543354 - 1544529 + | extracellular solute-binding protein TERM 1650 1544543 - 1544562 + F 89 -15 -3.09933 | opp_overlap 1544538 1544537 AACATAAAATTTTAC GGGGCTGG GTTT CCAGCCCC TTCCATACGTTCAGG TERM 1651 1545438 - 1545427 - g 73 -2.2 -5.16206 | overlap 1545435 AAATGAAGATAAAAA CCAC AGTA GTGA ACAATCTCACGGGAA TERM 1652 1545502 - 1545516 + G 79 -10 -3.74526 | opp_overlap 1545501 1545500 ATGTGGACGAAAATG GGAACG AGA CGTTCC TTGTTGGATTCATAG Tpet_1553 1544589 - 1546322 + | binding-protein-dependent transport systems inner membrane component TERM 1653 1547329 - 1547315 - g 81 -5 -5.15969 | overlap 1547328 GTGGAATTGAAAAAA GAGCTT ACA AAACTC TCCGAAGGAAACGAA TERM 1654 1547593 - 1547556 - g 70 -4.9 -4.49311 | gap 1, overlap 1547558 AGTATCAGCAGAAAA TTTCTGAGG-TTCAGCAG AAA CTGTTGGAGCCTCAGAGA ACGCTGAACCTTATC TERM 1655 1547685 - 1547673 - g 81 -3.4 -5.4477 | AAACTTTCAAAAAAA CTGA TCTCC TCAG ATACTCTTCTGCTCT Tpet_1554 1546322 - 1548793 + | binding-protein-dependent transport systems inner membrane component Tpet_1555 1548790 - 1550628 + | arabinogalactan endo-1,4-beta-galactosidase Tpet_1556 1550644 - 1551645 + | periplasmic binding protein/LacI transcriptional regulator Tpet_1557 1551703 - 1553652 + | Beta-galactosidase Tpet_1558 1553667 - 1554647 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1656 1554687 - 1554673 - g 87 -10 -4.20696 | overlap 1554665 CTACGAATGGGAAAA CCCACA GCT TGTGGG TGAAGGAACGGAGAA TERM 1657 1555459 - 1555469 + G 71 -6.8 -4.12279 | GACAGTAAAGCCGGA GGAC AGA GTCC TTTCCTTTGCCTTTG TERM 1658 1557013 - 1556989 - g 72 -5.7 -4.46514 | overlap 1556990 1557012 ATCGAGCGAAAGAAA GCTCTTCAAGA TGT TCTGGAAGAGA AGGGAAAACAGCGTT Tpet_1559 1554653 - 1557907 + | glycoside hydrolase family protein TERM 1659 1559342 - 1559328 - g 75 -2.8 -5.11613 | overlap 1559330 AGATCATGGAAAAAA GGTTCT GAA AGAAAC GCTCGAACTCCTCGG TERM 1660 1559499 - 1559485 - g 78 -6.4 -4.60487 | TACCACCTGGAAAAA GAAGGA AAG TCCTCC CTGAAAAAAAGAGTC Tpet_1560 1557913 - 1559571 + | Alpha-galactosidase-like protein TERM 1661 1559762 - 1559745 - g 70 -2 -5.00616 | gap 1, overlap 1559747 CCTTCTCTGAAAAAA GATCCAC CTCCT GTGGA-C TGGAAAGATAAGGGG TERM 1662 1559989 - 1559958 - g 76 -11.7 -2.57931 | overlap 1559957 1559966 TTCATTTTCGAGAAC CGTGGAAAGGAAG TCGGTG CTTCCCTTCCACA CCCGCACGGTCAGAT Tpet_1561 1559568 - 1560524 + | galactose-1-phosphate uridylyltransferase TERM 1663 1561229 - 1561217 - g 86 -9.1 -4.38712 | GGCACTCTGAGAAAA CGTGC CCA GCACG TGCTCGAAGAAAACG TERM 1664 1561362 - 1561346 - g 71 -9.5 -3.1637 | opp_overlap 1561344 1561349 1561351 1561354 AGAGACCTGTACGAA GTTTCCT GCG AGGAAAC GGATTTCATCGTGGA Tpet_1562 1560521 - 1561573 + | galactokinase TERM 1665 1561574 - 1561589 + F 100 -10.4 -5.46657 | opp_overlap 1561570 1561574 GTTCAAAAAATCTAA GGGAGC GTGA GCTCCC TTTTTTGTTAAAATG TERM 1666 1561589 - 1561574 - f 77 -10.4 -3.52177 | opp_overlap 1561574, overlap 1561570 GTTCAAAAAATCTAA GGGAGC GTGA GCTCCC TTTTTTGTTAAAATG TERM 1667 1561630 - 1561640 + F 72 -5.4 -4.55295 | overlap 1561616 TTCCAGATTCGGGGG GATC TGC GATC TTTGTTTATCGAACA Tpet_1563 1561825 - 1563033 + | IS605 family transposase OrfB TERM 1668 1563179 - 1563165 - T 89 -2.8 -5.72254 | TCAAACAATAAAAAA GAATGT GAG ACAGTC CGATATCGTGGTGAG Tpet_1565 1564598 - 1563588 - | hypothetical protein TERM 1669 1564175 - 1564161 - G 72 -5.6 -4.4078 | TCCGGCGAAGGAAAA CGGCAG AAT CTTCCG GGGATCTTTTATGAA TERM 1670 1564405 - 1564434 + g 76 -5.1 -4.74706 | gap 1, opp_overlap 1564402 1564405 AAATGAAAGAAAGAA GAAGCCTTCTGGAG AAT CTTCA-AAGGGTTC TTTTTCACTCTTCCC Tpet_1566 1564642 - 1565607 + | hypothetical protein Tpet_1567 1565612 - 1565818 + | FmdB family regulatory protein mgsA 1566315 - 1565815 - | methylglyoxal synthase Tpet_1569 1568239 - 1566308 - | diguanylate cyclase with PAS/PAC sensor TERM 1671 1567030 - 1567046 + g 85 -3.7 -5.52384 | TGAGAGAGGCTGTCA GAACG AAATCCC CGTTC TTTTTTTCGTACAGA TERM 1672 1567707 - 1567695 - G 72 -4.9 -4.57569 | opp_overlap 1567684 CCATTCTGTGAAAAA TTCAA GAT TTGAA ACAATACCCTTTCTT TERM 1673 1568140 - 1568116 - G 74 -5.7 -4.68512 | opp_overlap 1568134, overlap 1568118 CGAGAAGAAAAAGAA CTCTGGGAA GGGCAAT TTCCCAGCG AGTCGCTAAGTGAAT TERM 1674 1568223 - 1568197 - G 72 -5.7 -4.41897 | overlap 1568200 AATAAATGATTAAAA GTACGGTGCCC ACGAG GAGCACCGGCC AGATGAGTTTTTTCA TERM 1675 1568220 - 1568200 - G 74 -10.4 -3.16636 | overlap 1568197 AAATGATTAAAAGTA CGGTGCCC ACGAG GAGCACCG GCCAGATGAGTTTTT Tpet_1570 1569375 - 1568236 - | aldo/keto reductase TERM 1676 1568317 - 1568349 + g 80 -6.1 -4.81249 | overlap 1568319 ACACTTACTGAGACA TTCGCCGCATTCAAC ACA GAAGGAAGCGGCGGA TTTTTGACTTTCAAA TERM 1677 1568986 - 1568974 - G 72 -6.3 -4.21141 | opp_overlap 1568974 1568973 1568979 CTCGAAGAAATCAAA GAATC TCA GATTC CTGATTTTTTCCCAT TERM 1678 1568979 - 1568990 + g 79 -4.4 -5.10077 | opp_overlap 1568974, overlap 1568974 1568973 AGAAATCAAAGAATC TCAG ATTC CTGA TTTTTTCCCATCTTT TERM 1679 1570162 - 1570148 - g 83 -4.2 -5.4387 | AGAGAAAGGAAAAAA CTGGAA TTC TACCAG GAAGAAGAGAAGAAG TERM 1680 1572395 - 1572349 - g 72 -2.8 -5.04377 | overlap 1572352 1572353 GGAAAACAAAATAAA GTACCTCGGCCCCGTCGATCTC ACG GCGATAGACGAGTACGAAAAAC TCCGCGAAGAGTACG TERM 1681 1572681 - 1572644 - g 80 -6.3 -4.79955 | gap 1, opp_overlap 1572651, overlap 1572669 ATATCCATAAGAAAA CCGGGAAGAAGAGATCAG AAA CTGAGC-CTTCTTTCGGG TGGTGAGAAGGCGCT Tpet_1571 1569449 - 1572961 + | chromosome segregation protein SMC TERM 1682 1573458 - 1573473 + G 76 -2.5 -5.27335 | AGATTCCAAAACCAT CTGTG CGCTAA CACGG TTTTTCTTTGCGAAA Tpet_1572 1572964 - 1573503 + | NUDIX hydrolase TERM 1683 1573599 - 1573583 - g 70 -5.1 -4.55287 | TCGAGTGAGAGAAAA CAAAGAG AAT CTCGTTG TGAAAAGAATAGTTA TERM 1684 1573699 - 1573714 + G 72 -5.4 -4.46212 | AAATCGAACTGGAAC TCTCTC CATT GAGGGA TTTTCTCCTCGAAAC Tpet_1573 1573500 - 1574093 + | hypothetical protein TERM 1685 1574137 - 1574116 - g 75 -6.7 -4.50241 | gap 1 AAAGATGAAGGAAAA CACCTATCTT GAA AAGAT-GGTG ATGACCGCAAGTCCC TERM 1686 1574248 - 1574231 - g 79 -4.1 -5.24129 | overlap 1574232 TTGGCCGATAAAAAA TTCGTTG AGTT CAACGAG AAAGTGACGAGGGCA Tpet_1574 1574105 - 1574518 + | flagellar protein FliS TERM 1687 1575285 - 1575305 + G 71 -10.5 -2.73338 | overlap 1575284 AGACGATCCCCTTTC TCGTTCACT CGA AGTGAACGG CTTTCAGAGAGTTCT Tpet_1575 1574515 - 1575354 + | GCN5-related N-acetyltransferase TERM 1688 1575455 - 1575470 + G 73 -4 -4.82901 | gap 1, opp_overlap 1575448 GTACGGAATTCCTCT CACC-GA GGA TCAGGTG TTTTTGTACAGAGAA Tpet_1576 1575351 - 1576028 + | HAD family hydrolase TERM 1689 1576062 - 1576047 - T 100 -11.8 -5.26875 | TCGTGAAGTAAAAAA CCCGCC GGGC GGCGGG GAAAGTCACACTTTC Tpet_1577 1577363 - 1576068 - | hydroxylamine reductase TERM 1690 1576505 - 1576529 + g 72 -4.9 -4.66537 | TCTTGAACGGTACAT CGCATCCTCCT ACG ACGAGGAAGTG TTTTATCTTCCCGGC TERM 1691 1577487 - 1577468 - g 70 -2 -5.05782 | overlap 1577469 ATGGATCTGAAAAAA CTGCTCCC ATGT GGGAGAAT AATCGTGTTCAAAAA Tpet_1578 1577453 - 1578058 + | CRP/FNR family transcriptional regulator Tpet_1579 1578076 - 1579932 + | metal dependent phosphohydrolase TERM 1692 1580500 - 1580477 - g 91 -2.4 -5.92399 | gap 1, overlap 1580480 1580481 GAAGAAAAGAAAAAA CAGGTGGAATC TCA GATCCC-CATG AGAAGGATGGCAAAA Tpet_1580 1579910 - 1580623 + | short-chain dehydrogenase/reductase SDR TERM 1693 1580648 - 1580632 - T 100 -11.5 -5.63517 | GCTCTAAAGAAAAAA GAGGGGC AGA GCCCCCC GTCAGAGAACCTTCT Tpet_1581 1583184 - 1580650 - | alpha-glucan phosphorylase TERM 1694 1581120 - 1581130 + g 74 -6.8 -4.23391 | TGGTGCTGAATTTTG GAGC CAC GCTC TTTATGCTTTCTTTC TERM 1695 1581884 - 1581894 + g 72 -5.4 -4.50976 | ACTCTACCGAGGTAC CTGT CGA ACAG TTTTCTCATCTCGCG TERM 1696 1583129 - 1583141 + g 79 -7.7 -4.42062 | AGCACAATTTCTCCT CCTCT CAG AGAGG TTTCTTTCAGAAGTA Tpet_1582 1583851 - 1583279 - | hypothetical protein Tpet_1583 1584972 - 1583848 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 1697 1584107 - 1584119 + g 77 -3.3 -5.19212 | TATTCGTAAGGTAAT TCTCC TTT GGTGA TTTTTTCCTCGTACT TERM 1698 1584728 - 1584744 + g 95 -10.9 -4.56775 | opp_overlap 1584726 TCTGGTGTGAAACCT CTGGAGA CTC TCTCCAG TTTTTCCAAAACCAT TERM 1699 1584801 - 1584770 - G 83 -6.4 -5.03715 | overlap 1584773 1584783 ACCATTTTCAAAAAA GAAGGAGGGACAAC GGAA GGAGTCCCTCCACC GAAGTAGACGGTTTT TERM 1700 1584798 - 1584773 - G 89 -8.9 -4.62085 | overlap 1584770 1584783 ATTTTCAAAAAAGAA GGAGGGACAAC GGAA GGAGTCCCTCC ACCGAAGTAGACGGT Tpet_1584 1585817 - 1584969 - | 2-oxoacid ferredoxin oxidoreductase subunit beta TERM 1701 1585460 - 1585494 + g 100 -13.6 -4.36554 | opp_overlap 1585460 TCGTGAGACCGTAAA CCTGGTTGTCGTGGAC TAT GTTCACGATATCCGGG TTTCTTCTGATCGTG Tpet_1585 1587494 - 1585818 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Tpet_1586 1588966 - 1587491 - | diguanylate cyclase Tpet_1587 1589659 - 1588979 - | beta-lactamase domain-containing protein TERM 1702 1590412 - 1590395 - g 78 -4.9 -4.97957 | gap 1 GATAGAACAAGAAAA CTCAA-GG GAA CCGTTGAG CTCAGAGACATGATC Tpet_1588 1589867 - 1591207 + | response regulator receiver protein TERM 1703 1591283 - 1591295 + G 80 -6.9 -4.70511 | opp_overlap 1591283 1591282 GTGTTGTTTTCAAAT GCCCT TCT GGGGC TTCTTTTCTTTTTCC Tpet_1589 1591220 - 1592140 + | esterase/lipase-like protein TERM 1704 1592432 - 1592446 + GT 77 -10 -3.48276 | GCCGGGAAACTTCAC CCGTGT AGC ACACGG TTCTGTGAGCGGAAA Tpet_1591 1593731 - 1593009 - | hypothetical protein Tpet_1590 1592145 - 1593095 + | hypothetical protein Tpet_1592 1594427 - 1593744 - | glutamine amidotransferase class-I TERM 1705 1593782 - 1593794 + g 71 -3.3 -4.76041 | opp_overlap 1593772 1593782, overlap 1593772 AAAGAGACCTCAAGA GGCCT TTC AGGAC TTTTTCCTCCCTCTC Tpet_1593 1595226 - 1594429 - | hypothetical protein TERM 1706 1594522 - 1594545 + g 95 -7.4 -5.28176 | AACTATATTCCCTTC GATGGTCTTC AAAA GAAGTCCGTC TTTTTTATCGATGAA Tpet_1594 1595606 - 1595223 - | phage shock protein C, PspC Tpet_1595 1595695 - 1597185 + | glucose-6-phosphate 1-dehydrogenase TERM 1707 1597780 - 1597766 - g 72 -8.6 -3.71917 | AGCGGAAATTCTAAA GGAAGA ACC TCTTCC TGCCTACTTTGTGAG Tpet_1596 1597170 - 1597832 + | 6-phosphogluconolactonase TERM 1708 1597973 - 1597984 + G 75 -3 -5.11836 | TTTTGGCTTTTGTTG GAAT GATC ATTC TTTTGTTTTACATCT Tpet_1597 1597900 - 1598763 + | binding-protein-dependent transport systems inner membrane component TERM 1709 1598860 - 1598836 - g 72 -9.3 -3.63922 | overlap 1598834 1598859 ACGCCGTCGAAAACA TCTCCTTCCAC CTG GAGAAAGGAGA AACCCTGGGTCTCGT Tpet_1598 1598760 - 1599731 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1710 1600559 - 1600533 - g 81 -3.6 -5.29445 | overlap 1600536 TCTCAAGAAGAAAAA GAAGTTCATCCC TGA GGGAGAAACACC AAACCCGATAGACGT TERM 1711 1600556 - 1600536 - g 78 -6.1 -4.72127 | overlap 1600533 CAAGAAGAAAAAGAA GTTCATCCC TGA GGGAGAAAC ACCAAACCCGATAGA Tpet_1599 1599718 - 1600695 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpet_1600 1600711 - 1602216 + | extracellular solute-binding protein TERM 1712 1602222 - 1602242 + F 81 -11.1 -3.55563 | GGAAGATTGAACTCC GCCGCCC CTTCCCA GGGCGGC TTTCGGAGGTGCCGT TERM 1713 1603161 - 1603180 + G 70 -4.9 -4.45817 | opp_overlap 1603152 CAGATACAGGGACTT CCCTGCC ATACAG GGCACGG TTGTTTTCTTCGCTT Tpet_1601 1602259 - 1603266 + | binding-protein-dependent transport systems inner membrane component TERM 1714 1603288 - 1603270 - T 95 -11.7 -4.26188 | GTGAGATACTGAAAA GAGCGGG ACACG CCCGCTC ACAGTAATTTTTCGA Tpet_1602 1604486 - 1603287 - | isocitrate dehydrogenase TERM 1715 1604647 - 1604620 - R 93 -10.6 -4.58685 | opp_overlap 1604624 1604626, overlap 1604626 AAATCGTTGCAAAAA GTAAAAGGGTGC GGAA GCACCCTCTTTC ATTTAACGAGCAGAA TERM 1716 1604624 - 1604643 + r 74 -7.8 -4.05788 | opp_overlap 1604620 1604626, overlap 1604626 CGTTGCAAAAAGTAA AAGGGTGC GGAA GCACCCTC TTTCATTTAACGAGC TERM 1717 1604641 - 1604626 - R 91 -10.4 -4.77757 | opp_overlap 1604626 1604624, overlap 1604620 TTGCAAAAAGTAAAA GGGTGC GGAA GCACCC TCTTTCATTTAACGA TERM 1718 1604626 - 1604641 + r 78 -10.4 -3.62354 | opp_overlap 1604620 1604626, overlap 1604624 TTGCAAAAAGTAAAA GGGTGC GGAA GCACCC TCTTTCATTTAACGA Tpet_1603 1605305 - 1604646 - | thioredoxin-related protein-like protein TERM 1719 1604992 - 1604973 - G 72 -5 -4.56597 | TTTTCCCTTGAAAAA GAAAAACG TAGG CGTTCCTC TCACACCAAATCCAG Tpet_1604 1605971 - 1605321 - | cytochrome c biogenesis protein, transmembrane region TERM 1720 1606052 - 1606031 - R 80 -8.7 -4.25389 | gap 1, opp_overlap 1606030, overlap 1606033 ATTATAACACAGAAA CACCCCCTCA CAG CGAGGGGG-G CTGATGATTCAGTTC TERM 1721 1606051 - 1606033 - R 100 -12.4 -3.71649 | opp_overlap 1606030, overlap 1606031 TATAACACAGAAACA CCCCCTCA CAG CGAGGGGG GCTGATGATTCAGTT Tpet_1605 1606708 - 1606061 - | CBS domain-containing protein Tpet_1606 1607440 - 1606721 - | ABC transporter related TERM 1722 1606840 - 1606850 + g 72 -8.2 -3.65812 | opp_overlap 1606839 1606840 GGGCAACCTTCAAAG CGCC GAG GGCG TTCTGTTCCACCAGG Tpet_1607 1608287 - 1607433 - | ABC transporter related TERM 1723 1607729 - 1607762 + g 71 -10.4 -2.65298 | gap 1, overlap 1607728 CTCTGGCTATCTCCA GCTTTCTCTGCTCTC CATAC GGGAGC-GAGGAAGC CTTCTCGTACATCAC Tpet_1608 1609354 - 1608284 - | inner-membrane translocator Tpet_1609 1610259 - 1609360 - | inner-membrane translocator TERM 1724 1609969 - 1609956 - G 71 -3.7 -4.86861 | CAAGAAAGAAAGAAA CCCCG ATAG CGGTG ATAAGAGCGGAAATT TERM 1725 1610284 - 1610316 + r 85 -11.9 -3.34895 | opp_overlap 1610285 1610289, overlap 1610285 1610288 1610289 TTCCTTTCTTATCAA AGAAAGCGAAGCCCC AAA GGGGCCTCGCCTTCG TTCGTTCCAACTGGG TERM 1726 1610315 - 1610285 - R 100 -19.8 -3.72576 | opp_overlap 1610284 1610285 1610288 1610289, overlap 1610289 TCCTTTCTTATCAAA GAAAGCGAAGCCCC AAA GGGGCCTCGCCTTC GTTCGTTCCAACTGG TERM 1727 1610285 - 1610315 + r 93 -15.4 -2.60723 | opp_overlap 1610285 1610289, overlap 1610284 1610288 1610289 TCCTTTCTTATCAAA GAAAGCGAAGCCCC AAA GGGGCCTCGCCTTC GTTCGTTCCAACTGG TERM 1728 1610288 - 1610312 + r 85 -11.3 -3.45366 | opp_overlap 1610285 1610289, overlap 1610285 1610284 1610289 TTTCTTATCAAAGAA AGCGAAGCCCC AAA GGGGCCTCGCC TTCGTTCGTTCCAAC TERM 1729 1610289 - 1610311 + r 89 -14.8 -2.66899 | opp_overlap 1610285 1610289, overlap 1610288 1610285 1610284 TTCTTATCAAAGAAA GCGAAGCCCC AAA GGGGCCTCGC CTTCGTTCGTTCCAA TERM 1730 1610311 - 1610289 - R 100 -17 -4.49556 | opp_overlap 1610289 1610288 1610285 1610284, overlap 1610285 TTCTTATCAAAGAAA GCGAAGCCCC AAA GGGGCCTCGC CTTCGTTCGTTCCAA Tpet_1610 1611448 - 1610336 - | extracellular ligand-binding receptor Tpet_1611 1612788 - 1611532 - | hypothetical protein Tpet_1612 1614016 - 1612778 - | hypothetical protein TERM 1731 1613462 - 1613484 + g 80 -6.3 -4.82901 | gap 1 TTTCAGCATCGTGTT GTCCTC-GAG AAGC CTCTGAGGGC TTTTTCTACCCGGCA TERM 1732 1613811 - 1613838 + g 70 -4.8 -4.39386 | overlap 1613801 1613812 1613814 1613816 1613824 1613825 1613827 ATCTCGTAGATCATC TCTGCCTTTTCG TCCA CGAAAAGTCTGG TTTTCGTGATTTGCC Tpet_1613 1614930 - 1614013 - | ATPase TERM 1733 1616008 - 1615984 - g 71 -7.1 -4.01888 | ACTTTACAGGAGAAA GAGAACGGTGA TGC TCAACGCCCTC GAAGAGTACTTCTCC Tpet_1614 1615058 - 1616293 + | GntR family transcriptional regulator TERM 1734 1616373 - 1616352 - g 79 -4.4 -5.09426 | TGGAAGGGGAAAAAA GCTCGCAG TTGTGG CTGCAAAC GATGATCACGTGATA Tpet_1615 1616305 - 1617189 + | phosphate acetyltransferase Tpet_1616 1617839 - 1617186 - | adenosylhomocysteine nucleosidase TERM 1735 1617879 - 1617865 - R 100 -8.5 -5.34555 | CCAGATGAGAAAAAA GGGGC GCGGT GCCCC TCACTCTCTCTGTCC Tpet_1617 1618371 - 1617880 - | ferroxidase Tpet_1618 1618470 - 1619114 + | hypothetical protein Tpet_1619 1619127 - 1619426 + | hypothetical protein Tpet_1620 1619437 - 1620744 + | hypothetical protein TERM 1736 1621124 - 1621139 + G 72 -9 -3.53012 | opp_overlap 1621137 CGTTGTCTTTCATAT CGGTGT TCTA ACACCG TTTGAAGGCCAAACC Tpet_1621 1620744 - 1621241 + | hypothetical protein TERM 1737 1621487 - 1621471 - g 76 -5.1 -4.88222 | AGGAAAATGGAAAAA CTGAGGA AAA TCTTCAG GGGAGAGGCTGAGTT TERM 1738 1621627 - 1621617 - g 71 -6.8 -4.1043 | CGCAAAGAGCATAAA CGAG CTG CTCG GGATACTCGTAGACG Tpet_1622 1621285 - 1621653 + | flagellar protein FlaG protein Tpet_1623 1621658 - 1623481 + | flagellar hook-associated 2 domain-containing protein TERM 1739 1623526 - 1623548 + F 95 -8.4 -5.25735 | opp_overlap 1623526 TCTGTTTTGAATGAA GGGCAACTTT TTG GGGGTTGCCC TTTTTGCTTTTTTAA Tpet_1624 1623646 - 1624695 + | SARP family transcriptional regulator TERM 1740 1624748 - 1624713 - T 79 -3.9 -5.22312 | overlap 1624715 ATGCAGATTAAAAAA TAGCGCCGCCACCTC GCATGT GAAACAGCGACGCTC AAAGAAATGTACTTA TERM 1741 1624746 - 1624715 - T 70 -6.5 -4.23988 | overlap 1624713 GCAGATTAAAAAATA GCGCCGCCACCTC GCATGT GAAACAGCGACGC TCAAAGAAATGTACT Tpet_1625 1625899 - 1624799 - | hypothetical protein TERM 1742 1624904 - 1624920 + g 70 -2.2 -5.07567 | ATACCCTGCACTTAG TGACGT CTCCC ACGACA TTTTTTCGAGTGTCC Tpet_1626 1627065 - 1625902 - | type II and III secretion system protein Tpet_1627 1628693 - 1627062 - | hypothetical protein TERM 1743 1628357 - 1628377 + g 72 -5.3 -4.62054 | AAACACCCCTTGGAA CGTTCACCG TGA CGATGACCG TTTTGGTTTCCTTGG TERM 1744 1628713 - 1628743 + r 77 -6.8 -4.58685 | opp_overlap 1628717, overlap 1628717 CTCCCATAAAAAAAT AAAAGGCGAGGG AAGAAGC CCCTCGCCTTCC TTTTTCAAAAGATTT TERM 1745 1628739 - 1628717 - R 100 -12.7 -5.61277 | opp_overlap 1628713 1628717 CATAAAAAAATAAAA GGCGAGGGA AGAAG CCCCTCGCC TTCCTTTTTCAAAAG TERM 1746 1628717 - 1628739 + r 93 -12 -3.80855 | opp_overlap 1628717, overlap 1628713 CATAAAAAAATAAAA GGCGAGGG AAGAAGC CCCTCGCC TTCCTTTTTCAAAAG Tpet_1628 1629404 - 1628757 - | hypothetical protein Tpet_1629 1630137 - 1629460 - | hypothetical protein Tpet_1630 1631098 - 1630157 - | hypothetical protein TERM 1747 1631186 - 1631163 - H 72 -5.4 -4.53439 | overlap 1631153 TGAAATTGAAAGAAA TTTTCAATGA GTGT TCAATGAAAA AACAATAAAAACTGG TERM 1748 1631432 - 1631410 - g 72 -10.7 -2.90956 | opp_overlap 1631414 1631427, overlap 1631414 AAAGTACGTCATAGA GAAAGGTGA TCTCG TCACCTTTC CGAAAGGTTTGAGGT Tpet_1631 1631234 - 1631497 + | protein of unknown function DUF861, cupin_3 TERM 1749 1631797 - 1631807 + F 77 -3.2 -5.24416 | GAAGTCGACGGTGGG TGCG TGG TGCA TTTTTCTTCTGGTTA TERM 1750 1632182 - 1632168 - g 86 -2.9 -5.76237 | GATAGAAACAAAAAA GAAAA TTCAC TTTTC ACGGGAAGGGAAGGT Tpet_1632 1631848 - 1632249 + | hypothetical protein Tpet_1633 1632843 - 1632241 - | putative monovalent cation/H+ antiporter subunit B Tpet_1634 1633508 - 1632840 - | subunit of the multisubunit Na+/H+ antiporter-like protein Tpet_1635 1633741 - 1633505 - | hypothetical protein TERM 1751 1633736 - 1633723 - G 70 -5.3 -4.44797 | CGAGGAACATCAAAA CTACA CCGA TGTAG ATCATCCTCTGTCCC Tpet_1636 1633980 - 1633738 - | hypothetical protein Tpet_1637 1634348 - 1633977 - | hypothetical protein Tpet_1638 1635685 - 1634327 - | putative monovalent cation/H+ antiporter subunit D Tpet_1639 1636014 - 1635682 - | NADH-ubiquinone oxidoreductase, chain 4L Tpet_1640 1636952 - 1635999 - | radical SAM domain-containing protein Tpet_1641 1637671 - 1636949 - | ribonuclease III Tpet_1642 1638221 - 1637658 - | phosphodiesterase Tpet_1643 1639324 - 1638224 - | ABC-2 type transporter TERM 1752 1638635 - 1638625 - G 77 -6.8 -4.49958 | AGGCTATGAAAGAAA CGGA GGC TCCG ATAAAGGTGTAGGCA TERM 1753 1639259 - 1639278 + g 72 -5 -4.64676 | AACGGGTGAGGCGAT GATCATCA TCAG TGAAGATC TTTTCTTCAAAATCC Tpet_1644 1639910 - 1639317 - | dTMP kinase TERM 1754 1639458 - 1639468 + g 72 -3.2 -5.00884 | overlap 1639454 1639465 TTCCCTCACACGTTC GAGG AAC TCTC TTTTTTCAAAGCGAT TERM 1755 1639670 - 1639682 + g 71 -3.3 -4.90778 | opp_overlap 1639658, overlap 1639662 GAACGACGTATCCTT CGGAA AGG TACCG TTTTATTTCCATCAC TERM 1756 1640179 - 1640151 - R 84 -4.5 -5.42259 | TCAGTTTCAAAAAAA CTCCCCTGAAGAA CAA CTCCTCCGAGAAG GGAGACAGAAACACC Tpet_1646 1641435 - 1640494 - | ornithine carbamoyltransferase Tpet_1647 1642632 - 1641439 - | adenylosuccinate synthetase TERM 1757 1642001 - 1642036 + g 78 -6.3 -4.62783 | gap 1, overlap 1641999 1642005 1642009 AGAAGGACCCCCTGT GTTCCTTCGAAGAGAA CGCTC TTCTTTTCG-AGGATC TTTTTCAACTGGATC TERM 1758 1642009 - 1642024 + g 73 -7.6 -4.11773 | overlap 1641999 1642005 1642001 CCCCTGTGTTCCTTC GAAGAG AACG CTCTTC TTTTCGAGGATCTTT Tpet_1648 1643933 - 1642638 - | adenylosuccinate lyase TERM 1759 1642745 - 1642770 + g 77 -9 -3.92577 | overlap 1642743 GTTTCTTAACGTCTT CATCCTCGAG GAGGTA CTCGAGGAAG TGTTTTTCGGAGTTC Tpet_1649 1645667 - 1644348 - | RNA methyltransferase Tpet_1650 1647311 - 1645671 - | arginyl-tRNA synthetase TERM 1760 1646919 - 1646943 + g 76 -9.4 -3.6715 | gap 1 GATCTGTCTACCGTG TCCAACGGTGA ACGG TC-CCGTTGGA TTTGCACTTCCATAC Tpet_1651 1648185 - 1647355 - | hypothetical protein Tpet_1652 1648699 - 1648178 - | hypothetical protein TERM 1761 1648246 - 1648236 - G 71 -6.8 -4.04397 | AGCTCCAGAAAAACA GGAG CTA CTCC CTCCGCTACTACCCC TERM 1762 1648347 - 1648333 - G 73 -4.2 -4.75309 | GGAAATTCAATAAAA CTATGG AGG CCAGAG CCGTTTCCTGTGTGT Tpet_1653 1649989 - 1648727 - | histidyl-tRNA synthetase TERM 1763 1649624 - 1649644 + g 78 -5.4 -4.8048 | TACCTGGTGGAACTG CCTCAATC TCCCC GATTGTGG TTTTTCGTATCGAAA Tpet_1654 1651485 - 1649986 - | TrkH family potassium uptake protein Tpet_1655 1652148 - 1651492 - | TrkA domain-containing protein Tpet_1656 1652576 - 1652145 - | TrkA domain-containing protein Tpet_1657 1653264 - 1652596 - | rhomboid family protein Tpet_1658 1654117 - 1653269 - | hypothetical protein Tpet_1659 1654178 - 1656067 + | methionyl-tRNA synthetase TERM 1764 1657034 - 1657022 - g 72 -6.3 -4.27512 | overlap 1657019 GGTCATAATAAACAA TCTCT ACA AGAGA ACTGCTCTTCAGGAT TERM 1765 1658054 - 1658044 - g 78 -5.4 -4.89966 | ACAGCGAAAAAGAAA CACT CAT AGTG GCAACGAAGATGGGT Tpet_1660 1656081 - 1658495 + | DNA gyrase, A subunit Tpet_1661 1658492 - 1658866 + | hypothetical protein Tpet_1662 1658863 - 1659456 + | SOS-response transcriptional repressor, LexA Tpet_1663 1659468 - 1659809 + | anti-sigma-factor antagonist TERM 1766 1659979 - 1659992 + G 72 -5.3 -4.57353 | TCTGTCGAACGAAGC GGATT TTGG AATCC TTTTGTGTGGTACAG Tpet_1664 1659806 - 1660237 + | ribose 5-phosphate isomerase B TERM 1767 1660360 - 1660384 + GF 91 -8.6 -5.03145 | TGTTGAAGATCTACC TTAGGGAGGG TGAAC CCCTTCCTGA TTTTTTGAAAGATTG Tpet_1665 1660227 - 1661021 + | ribosomal L11 methyltransferase TERM 1768 1661310 - 1661292 - gf 82 -5.2 -5.27206 | opp_overlap 1661292 1661293 1661296, overlap 1661281 1661293 TAGAGAGAAGAAAAA GGCTCCTC ACC GAAGAGCA TTCTTTTCGTGAAGT TERM 1769 1661309 - 1661293 - gf 75 -8.7 -3.74697 | opp_overlap 1661292 1661293 1661296, overlap 1661281 1661292 AGAGAGAAGAAAAAG GCTCCTC ACC GAAGAGC ATTCTTTTCGTGAAG Tpet_1666 1660991 - 1661503 + | hypothetical protein Tpet_1667 1661500 - 1662342 + | pantoate--beta-alanine ligase Tpet_1668 1662347 - 1662820 + | phosphodiesterase Tpet_1669 1662850 - 1663761 + | ExsB family protein Tpet_1670 1666793 - 1663833 - | glycoside hydrolase family protein TERM 1770 1666178 - 1666149 - G 78 -6.4 -4.56597 | opp_overlap 1666147 1666145 1666149 CTTTCGCCTCAAAAA CTCCTCTGGAAA TCGTTC TGTCCAGGGGAG TGTGGTTTCTTTAGG Tpet_1671 1668220 - 1666790 - | carbohydrate kinase, FGGY TERM 1771 1667277 - 1667261 - G 71 -7.9 -3.92075 | overlap 1667262 1667271 ATCGGGATCGAGAAA CGCCTGG AAA CCAGGGG CATTCCTGGCCGATT Tpet_1672 1668921 - 1668211 - | rhamnulose-1-phosphate aldolase Tpet_1673 1670066 - 1668918 - | L-rhamnose isomerase TERM 1772 1669710 - 1669721 + g 83 -2.2 -5.70829 | CACGCACTCCATCAC GTGA GCGA TCGC TTTTTTTCTGATCTT Tpet_1674 1670410 - 1670066 - | hypothetical protein TERM 1773 1671019 - 1671007 - g 72 -2.7 -5.0133 | GAGTGTGGGAAAAAA TTCTC CGT GAAAA AAGCCTTTGTCTCCT TERM 1774 1671212 - 1671194 - g 73 -2.4 -5.252 | TACCCGCAGAAAAAA TCGATCAT CTC ATCACCGA CAGAAAACCTCCAGA Tpet_1675 1670476 - 1671276 + | DeoR family transcriptional regulator Tpet_1676 1671301 - 1672701 + | glycoside hydrolase family protein TERM 1775 1672725 - 1672742 + F 100 -14.1 -5.55769 | opp_overlap 1672722 1672721 TTTGTAAAAACCGTA GCGCCCC ATAA GGGGCGC TTTTTTGTTGTAAGG TERM 1776 1673061 - 1673025 - g 72 -5.2 -4.67982 | gap 1 TTGGACTCAACAAAA TCGTTCCCGGTGAGTAT TACA AT-CTCACCGACTACGA ACGTCTGACAGGCAA Tpet_1677 1672949 - 1674916 + | extracellular solute-binding protein TERM 1777 1674936 - 1674955 + F 100 -15 -5.45652 | opp_overlap 1674923 1674936 CATCTACCGGAATTA CCCGGTGG TCCA CCACCGGG TTTTTTATTGCCGAT TERM 1778 1674955 - 1674936 - f 89 -15 -2.73681 | opp_overlap 1674936, overlap 1674923 CATCTACCGGAATTA CCCGGTGG TCCA CCACCGGG TTTTTTATTGCCGAT Tpet_1678 1675035 - 1676891 + | FG-GAP repeat-containing protein Tpet_1679 1676917 - 1678197 + | extracellular solute-binding protein TERM 1779 1678219 - 1678201 - f 78 -11.6 -2.96882 | opp_overlap 1678202, overlap 1678198 GGAAAGAGATAACCA GGGCGGGG GTT CCCCGCCT TTTTTGGAGGGAGTA TERM 1780 1678202 - 1678218 + F 100 -15.1 -5.00884 | opp_overlap 1678201 1678198 GAAAGAGATAACCAG GGCGGGG GTT CCCCGCC TTTTTTGGAGGGAGT TERM 1781 1678315 - 1678327 + G 81 -4.9 -5.1517 | CTTTGTTCTTGTACC TATAG TTT CTATA TTTTTCATTTCTTTT Tpet_1680 1678238 - 1679089 + | binding-protein-dependent transport systems inner membrane component Tpet_1681 1679093 - 1679896 + | binding-protein-dependent transport systems inner membrane component TERM 1782 1682440 - 1682427 - g 72 -5.2 -4.63218 | CTTTCGGGAATAAAA CCGG TTGCTC CCGG TTGGAAGAAGATAAG TERM 1783 1682529 - 1682509 - g 100 -8.3 -5.45802 | opp_overlap 1682509 CGGCCAAAATAAAAA CCCCAAATG GAT CACTTGAGG TTAGTTGGAAAAAGC Tpet_1682 1680090 - 1682720 + | alpha-L-rhamnosidase TERM 1784 1683413 - 1683439 + G 73 -10.2 -3.01001 | overlap 1683409 GCACTCTCCAAGGGG CTTCCAGAGAAC AAA GTGTTCTGGAAG TATCCTTTGAGGATA Tpet_1683 1682714 - 1683697 + | binding-protein-dependent transport systems inner membrane component TERM 1785 1683834 - 1683851 + G 75 -2.7 -5.1675 | gap 1 TTAATAATCTACGTT CTTGC-GA TAT TCTGCGAG TTTTTTGCTCCGTAC Tpet_1684 1683708 - 1684811 + | binding-protein-dependent transport systems inner membrane component Tpet_1685 1684823 - 1685818 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1786 1686333 - 1686348 + G 71 -7.6 -3.94067 | opp_overlap 1686314, overlap 1686315 ATCGCACGTGCGATC GCTTTG AAGC CAAAGC TTGTTCTGTGTGATG Tpet_1686 1685805 - 1686827 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1787 1688560 - 1688542 - g 79 -10.3 -3.53224 | CACTTCGGGTGGAAA GGGTGGT GAAGA ACCACCC GAAGGATCCGACATC Tpet_1687 1686824 - 1688818 + | extracellular solute-binding protein TERM 1788 1688845 - 1688865 + F 100 -14 -4.63218 | opp_overlap 1688845 TCTGAAAGACCACAA GGGGGTGG ATGTA CCACCCCC TTTTCTTAAAGCAGG TERM 1789 1688865 - 1688845 - f 100 -14 -3.56837 | opp_overlap 1688845 TCTGAAAGACCACAA GGGGGTGG ATGTA CCACCCCC TTTTCTTAAAGCAGG Tpet_1688 1688853 - 1690076 + | hypothetical protein Tpet_1689 1690094 - 1691785 + | Beta-glucuronidase TERM 1790 1691958 - 1691970 + G 72 -6.2 -4.2528 | overlap 1691943 GGGGAGAATTCTTTG CGGG ATCTC CCCG TTTCTTGAATTGAAC Tpet_1690 1691791 - 1692945 + | hypothetical protein Tpet_1691 1693028 - 1694365 + | major facilitator transporter Tpet_1692 1694414 - 1694677 + | stage V sporulation protein S TERM 1791 1694702 - 1694673 - T 100 -15.1 -4.56597 | opp_overlap 1694674 1694679, overlap 1694674 TTGTCTTTCCAAAAA GCTAAAGGGGAGC ATCA GCTCCCCTTTAGT TCTCCTGTTTCTCGC TERM 1792 1694674 - 1694701 + T 100 -18.6 -3.59024 | opp_overlap 1694673 1694674, overlap 1694679 TGTCTTTCCAAAAAG CTAAAGGGGAGC ATCA GCTCCCCTTTAG TTCTCCTGTTTCTCG TERM 1793 1694701 - 1694674 - T 100 -18.6 -3.33744 | opp_overlap 1694674 1694679, overlap 1694673 TGTCTTTCCAAAAAG CTAAAGGGGAGC ATCA GCTCCCCTTTAG TTCTCCTGTTTCTCG TERM 1794 1694679 - 1694696 + T 100 -12.7 -4.03782 | opp_overlap 1694674 1694673, overlap 1694674 TTCCAAAAAGCTAAA GGGGAGC ATCA GCTCCCC TTTAGTTCTCCTGTT Tpet_1693 1696317 - 1694719 - | ferredoxin-dependent glutamate synthase Tpet_1694 1696440 - 1697438 + | TrkA domain-containing protein Tpet_1695 1697440 - 1697745 + | CutA1 divalent ion tolerance protein Tpet_1696 1698241 - 1697726 - | hypothetical protein Tpet_1697 1698951 - 1698238 - | ABC transporter related TERM 1795 1698857 - 1698816 - G 93 -15.3 -3.04792 | gap 1, opp_overlap 1698818, overlap 1698818 GGATCATGTTGAAGA TAG-TGGTCTTCCCGGCTCC GTT GGGACCGAGAAGACCAACTA TCTCACCCCTGTGAA TERM 1796 1698854 - 1698818 - G 85 -13.7 -3.08073 | opp_overlap 1698818, overlap 1698816 ATCATGTTGAAGATA GTGGTCTTCCCGGCTCC GTT GGGACCGAGAAGACCAA CTATCTCACCCCTGT TERM 1797 1698818 - 1698855 + g 74 -11.3 -2.88249 | gap 1, opp_overlap 1698818 1698816 ATCATGTTGAAGATA G-TGGTCTTCCCGGCTCC GTT GGGACCGAGAAGACCAAC TATCTCACCCCTGTG Tpet_1698 1699427 - 1698948 - | outer membrane chaperone Skp (OmpH) Tpet_1699 1699987 - 1699442 - | helix-hairpin-helix repeat-containing competence protein ComEA Tpet_1700 1700685 - 1699984 - | hypothetical protein TERM 1798 1700665 - 1700628 - G 72 -6.3 -4.23999 | CCACACCGAAAATAA CGACGATCAGCCAAAAC AGAA ACCTCGACTGACCATCG GAAAGGGTGATTCTG Tpet_1701 1701684 - 1700689 - | peptidase M42 family protein Tpet_1702 1702700 - 1701681 - | cellulase Tpet_1703 1703702 - 1702704 - | peptidase M42 family protein TERM 1799 1703571 - 1703581 + g 74 -8.2 -3.85209 | opp_overlap 1703569 1703570, overlap 1703577 GTACCCGATCAAACT CCCG TGG CGGG TTGTTCTCGCTTCAT Tpet_1704 1704337 - 1703705 - | septum site-determining protein MinC TERM 1800 1704008 - 1704021 + g 70 -2.3 -4.94992 | overlap 1704005 AACAACAGTCTGACC GGATC GGAT GTTCC TTTTTATCACTTTCC TERM 1801 1704745 - 1704761 + G 71 -8 -3.84451 | opp_overlap 1704745 1704744, overlap 1704754 AAAGACAACGACAAG CCCATC TCGCT GATGGG TTTCAGTTTCGGAGG Tpet_1705 1704397 - 1705254 + | alpha/beta hydrolase fold Tpet_1706 1706502 - 1705237 - | citrate transporter TERM 1802 1705884 - 1705896 + g 73 -4.1 -4.76041 | overlap 1705866 TGAGAAGATTTCTCA GTCTT TCA AAGGC TTTTTCATCGATGTG TERM 1803 1706681 - 1706701 + H 70 -9.6 -2.96216 | CCATCACTGCTATGG CCCGGCGG TTTCT CCACCGGG TGTGTGATGGTGGAA TERM 1804 1706726 - 1706748 + H 100 -14.9 -4.67942 | opp_overlap 1706720 1706719 GTGGAAAATCGTTCG GGCCACGTC GAGAA GACGTGGCC TTTTCGTTTATTGGG Tpet_1707 1706775 - 1707593 + | histidyl-tRNA synthetase-like protein Tpet_1708 1707587 - 1708213 + | ATP phosphoribosyltransferase Tpet_1709 1708185 - 1709471 + | histidinol dehydrogenase TERM 1805 1710050 - 1710040 - g 71 -6.8 -4.13561 | TCTTCTGAAAAAATA CGAG AAC CTCG CCGTGATCAGGACCT Tpet_1710 1709468 - 1710475 + | histidinol-phosphate aminotransferase Tpet_1711 1710472 - 1711059 + | imidazoleglycerol-phosphate dehydratase TERM 1806 1711299 - 1711323 + G 72 -5 -4.56597 | gap 1, opp_overlap 1711319 GGAAAATACGTGGTC GGAGTCTGCCT TGGA ATGCAG-CTCC TTTTTGAAGAGAGCG hisH 1711056 - 1711661 + | imidazole glycerol phosphate synthase subunit HisH TERM 1807 1711723 - 1711705 - g 76 -2.4 -5.37593 | overlap 1711708 GGTGAAAGGAAAAAA GGAGAACA CCA TATTCTAC GAAAAAGATCCCGCA TERM 1808 1711777 - 1711793 + G 82 -10.9 -3.53444 | AGAGGGATTCACACT GATCCAC GTT GTGGATC TTTCGAAGGCGATAG TERM 1809 1711958 - 1711968 + G 72 -5.4 -4.45577 | AGTTCAAAAGTTCTG GAAG ATC CTTC TTTTCTGAAATTTCT Tpet_1713 1711640 - 1712365 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 1810 1713098 - 1713084 - g 72 -2.8 -5.09173 | GAATATCTCAAAAAA CACG GAGTGAA CGTG AGACTGGAGGGGTTG Tpet_1714 1712355 - 1713119 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 1811 1713372 - 1713387 + G 70 -2.5 -5.03314 | AGGTGGCGTGTCACA CGGGA AACAGA TCCTG TTTTTTCAAGGTGGA TERM 1812 1713549 - 1713531 - g 71 -3.8 -4.75776 | AAGGCAAGGGAAAAA TCGCCAAA AAG TTCGGTGA AGAAGCGGTAGAGGT Tpet_1715 1713116 - 1713706 + | phosphoribosyl-ATP pyrophosphohydrolase Tpet_1716 1714846 - 1713707 - | UDP-N-acetylglucosamine 2-epimerase TERM 1813 1713944 - 1713973 + g 70 -9.3 -3.38951 | gap 1, opp_overlap 1713943 1713946, overlap 1713946 TTCCCTTCTCAGAAC GA-TCACCGGCCTT CCG AGGGCCGGTGCCTC TTCCTGTATTCCTCC TERM 1814 1713946 - 1713970 + g 76 -12.1 -2.54803 | opp_overlap 1713943 1713946, overlap 1713944 CCCTTCTCAGAACGA TCACCGGCCTT CCG AGGGCCGGTGC CTCTTCCTGTATTCC TERM 1815 1715181 - 1715141 - g 75 -2.6 -5.1963 | GCCAACGAAGAAAAA CACCGCTCCAGC-CTGTTTC ATA GGAACAAAGCTGGCG-GATG ACGATGAGCCGGTGC TERM 1816 1715330 - 1715318 - g 72 -10.5 -2.77013 | overlap 1715317 CATCGTTCCAACAAG GCCGG AAA CCGGC TACGGCTACATAGAG Tpet_1717 1714890 - 1715897 + | mannose-1-phosphate guanylyltransferase (GDP) Tpet_1718 1716981 - 1715872 - | major facilitator transporter Tpet_1719 1717126 - 1717368 + | YruB family glutaredoxin-like protein TERM 1817 1717372 - 1717388 + T 100 -15.1 -4.80453 | opp_overlap 1717372 GGAATATCGTGAAAA GCGGGGG ATT CCCCCGC TTTATTTTGTCATAC TERM 1818 1717388 - 1717372 - T 100 -15.1 -4.14472 | opp_overlap 1717372 GGAATATCGTGAAAA GCGGGGG ATT CCCCCGC TTTATTTTGTCATAC Tpet_1720 1717992 - 1717390 - | TetR family transcriptional regulator TERM 1819 1717716 - 1717691 - G 72 -5.5 -4.4648 | AGTGTTATCAGAAAA TCCGCTTCT TCGGGATG AGAAGCAGA GTACTCCAGTTTCTT Tpet_1721 1718794 - 1718003 - | hypothetical protein Tpet_1722 1719672 - 1718791 - | ABC transporter related Tpet_1723 1720152 - 1719781 - | hypothetical protein TERM 1820 1719932 - 1719918 - G 72 -5 -4.56597 | GCTGCTTCTCAAAAA GTTCAT ACC ACGAAC CAAAGAATGGATTCA Tpet_1724 1720678 - 1720154 - | integral membrane protein-like protein TERM 1821 1720435 - 1720423 - G 71 -3.3 -4.80453 | overlap 1720405 1720432 CCATTATAAAATAAA GTCCA AAA TGGGC AGATTTTCTGACAAG TERM 1822 1721435 - 1721448 + G 72 -5.3 -4.58395 | opp_overlap 1721427 1721435 CATCAGATCAGAAAA CAAGA AGCT TCTTG TTTTTGAAAAATCCG TERM 1823 1721448 - 1721435 - g 70 -5.3 -4.52047 | opp_overlap 1721435, overlap 1721427 CATCAGATCAGAAAA CAAGA AGCT TCTTG TTTTTGAAAAATCCG Tpet_1725 1720776 - 1721537 + | esterase/lipase-like protein TERM 1824 1722036 - 1722047 + G 72 -5.8 -4.4727 | opp_overlap 1722034 1722036 TTTCTGTTCCAAACA TCGC CCTT GCGA TTTTATCCATCTTCG TERM 1825 1722103 - 1722083 - g 72 -8.3 -3.78677 | AAAGAACCGAAAAGA GGTGCCTTT GAA AAAGGCATC GGTGAACTCGTTCAA Tpet_1726 1721540 - 1722805 + | major facilitator transporter Tpet_1727 1722830 - 1723681 + | hypothetical protein Tpet_1728 1723723 - 1724169 + | hypothetical protein Tpet_1729 1724246 - 1724578 + | hypothetical protein TERM 1826 1726550 - 1726528 - g 83 -6.4 -5.07567 | overlap 1726543 GTAGATCCGAAAAAA CTTTCAAG AAGCGAA CTTGAAAG ACTATCAAGAAGGTA Tpet_1731 1726186 - 1727436 + | Glu/Leu/Phe/Val dehydrogenase, C terminal TERM 1827 1727436 - 1727467 + T 70 -7.2 -3.89614 | opp_overlap 1727442, overlap 1727438 1727442 AGGTATCTATCCGTG AAAAAAGCCCCACC GGTC GGTGGGGCTTCGTA TTTATCAAACTTCAA TERM 1828 1727438 - 1727465 + T 75 -9.8 -3.5362 | opp_overlap 1727442, overlap 1727436 1727442 GTATCTATCCGTGAA AAAAGCCCCACC GGTC GGTGGGGCTTCG TATTTATCAAACTTC TERM 1829 1727442 - 1727461 + T 100 -15 -3.50335 | opp_overlap 1727442, overlap 1727438 1727436 CTATCCGTGAAAAAA GCCCCACC GGTC GGTGGGGC TTCGTATTTATCAAA TERM 1830 1727461 - 1727442 - T 100 -15 -5.02074 | opp_overlap 1727438 1727436 1727442 CTATCCGTGAAAAAA GCCCCACC GGTC GGTGGGGC TTCGTATTTATCAAA Tpet_1732 1729244 - 1727472 - | hypothetical protein TERM 1831 1728001 - 1727987 - G 71 -7.1 -4.0492 | CAACTTCGACAGAAA GCCTC GCGTA GAGGC GACCAGAAGAAGTGG TERM 1832 1728332 - 1728348 + g 72 -6.6 -4.30809 | TCTGCTTTGGTTCTG GGAAGA CATCC TCTTCC TTTTCATGCCTCTTC Tpet_1733 1731809 - 1729299 - | hypothetical protein TERM 1833 1733198 - 1733179 - g 77 -3.6 -5.25805 | AAGAAATCCAAAAAA CAGAAAAG TTTA CTTTTATG GAGATGATATCCTAT Tpet_1735 1732365 - 1733600 + | hypothetical protein Tpet_1736 1733593 - 1734363 + | hypothetical protein Tpet_1737 1735087 - 1734674 - | hypothetical protein TERM 1834 1735912 - 1735932 + H 72 -5.5 -4.57569 | overlap 1735907 AAAACACGACGGATT TTTGTCC TCAATTT GGACAAA TTTTTCGGAGAATCG TERM 1835 1736155 - 1736140 - g 72 -9 -3.51232 | opp_overlap 1736137 1736140, overlap 1736136 TGCCCCCGAAAGCAA CTTCCG ACCC CGGAAG TGATATAATAAAGAT Tpet_1739 1736115 - 1737266 + | ATPase Tpet_1740 1737688 - 1737281 - | cupin 2 domain-containing protein Tpet_1741 1739598 - 1737703 - | esterase/lipase-like protein Tpet_1742 1740477 - 1739617 - | 2,5-didehydrogluconate reductase Tpet_1743 1741590 - 1740586 - | aldo/keto reductase TERM 1836 1741389 - 1741399 + g 71 -6.8 -4.03234 | overlap 1741372 CGAGTGCTTCGCCTA CGAG TTC CTCG TTTGTGTAAGGACCG Tpet_1744 1741719 - 1742618 + | AraC-like transcriptional regulator TERM 1837 1742974 - 1742952 - f 75 -10.7 -2.90992 | opp_overlap 1742950 1742970, overlap 1742957 AAGGCGTGGAAACGA TCGAAGAGT ATAAA ACTCTTCGA GACTTGGGTATCGAA TERM 1838 1743109 - 1743119 + F 76 -5.4 -4.75174 | CAAACACCTGATCCA GCTT GAA AAGC TTTTTCCGTTCAATG TERM 1839 1743294 - 1743259 - g 85 -6.3 -5.20783 | overlap 1743253 1743290 ATGGAAAGAGAAAAA GTGGAACTTTTTAAG GAAGTG CTGAAAAAACTCCAC GAAGGGGAAGACGTG TERM 1840 1743339 - 1743325 - g 78 -5 -5.03145 | overlap 1743337 GAATCCTTGAAAAAA CAATTC GGA GAACTG CTCTCGCAGATTCCA Tpet_1746 1743244 - 1744545 + | putative PAS/PAC sensor protein TERM 1841 1744536 - 1744582 + F 95 -14.7 -3.2241 | gap 1, opp_overlap 1744540 1744550, overlap 1744550 GAGACTTCTCGACTG GAAAGACTGAAAAA-GCGCAGG TTCT CCTGCGCTTTTTTCAATCATTC GTTTTGTAACCCATA TERM 1842 1744578 - 1744540 - f 100 -16.3 -3.59979 | gap 1, opp_overlap 1744536 1744550, overlap 1744550 CTTCTCGACTGGAAA GACTGAAAAA-GCGCAGG TTCT CCTGCGCTTTTTTCAATC ATTCGTTTTGTAACC TERM 1843 1744550 - 1744567 + F 100 -12.7 -5.12617 | opp_overlap 1744540 1744550, overlap 1744536 GGAAAGACTGAAAAA GCGCAGG TTCT CCTGCGC TTTTTTCAATCATTC TERM 1844 1744567 - 1744550 - f 100 -12.7 -4.77986 | opp_overlap 1744550 1744536, overlap 1744540 GGAAAGACTGAAAAA GCGCAGG TTCT CCTGCGC TTTTTTCAATCATTC Tpet_1747 1744685 - 1745011 + | regulatory protein, ArsR Tpet_1748 1745017 - 1746105 + | permease Tpet_1749 1746119 - 1746361 + | redox-active disulfide protein 2 TERM 1845 1746381 - 1746406 + F 100 -14.1 -4.39954 | opp_overlap 1746385, overlap 1746385 GAACTCTGTTTAAGA TAAAGCCGCCT TCTC AGGCGGCTTTG TTTGTATTATTCTTC TERM 1846 1746385 - 1746402 + F 100 -12.7 -4.72277 | opp_overlap 1746385, overlap 1746381 TCTGTTTAAGATAAA GCCGCCT TCTC AGGCGGC TTTGTTTGTATTATT TERM 1847 1746402 - 1746385 - f 100 -12.7 -4.1891 | opp_overlap 1746385 1746381 TCTGTTTAAGATAAA GCCGCCT TCTC AGGCGGC TTTGTTTGTATTATT TERM 1848 1746431 - 1746442 + F 77 -4.4 -5.14477 | opp_overlap 1746430 TTCTTCATCAAAAGC CTCT CTGA AGAG TTTTTTCAATCTCTG Tpet_1750 1746753 - 1746884 + | hypothetical protein TERM 1849 1747482 - 1747470 - g 86 -4.9 -5.47218 | opp_overlap 1747470 GGTGATTGAAAAAAA TAAAG AAG CTTTA TTTGTGTTGGAGAAT Tpet_1751 1747153 - 1749324 + | phosphoadenosine phosphosulfate reductase TERM 1850 1749973 - 1749961 - g 82 -2.7 -5.61689 | AAAAGCAACAAAAAA TTCCT TAA AGAAA GAAGGAATCGAACTC TERM 1851 1751338 - 1751324 - g 84 -5 -5.30339 | AGTAAAATAGAAAAA GCCTTT AAA AAAGAC CATGCAATTCACTTG TERM 1852 1751936 - 1751915 - g 79 -4.5 -5.10163 | overlap 1751910 1751933 AATCTGAAAATAAAA GATGATGTT CCTG AAAATCATC CTCTAAAAAAGATGT TERM 1853 1752649 - 1752622 - g 81 -3.5 -5.34555 | overlap 1752624 CTACATTAGAAAAAA TATGCAAGAAG AGGTTG CTTCTTGGACA GAAGGCAAAGTTAGA Tpet_1752 1749551 - 1752922 + | hypothetical protein TERM 1854 1752994 - 1752984 - g 76 -4 -5.02201 | opp_overlap 1752984 AAAACAGGATAAAAA TTCT AAA AGAA TCTCTGACAGGAGGT Tpet_1753 1752922 - 1755315 + | hypothetical protein Tpet_1754 1755312 - 1756733 + | hypothetical protein Tpet_1755 1757786 - 1756905 - | hypothetical protein TERM 1855 1757678 - 1757691 + g 78 -6.7 -4.57569 | TCAGAACACCGTTTT CTTCG AGCA CGAAG TTTTTGGAACACTCC Tpet_1756 1758255 - 1757803 - | hypothetical protein TERM 1856 1758024 - 1758034 + g 82 -3.2 -5.45652 | overlap 1758021 CATGGAGGATCGTCT CTTC GAG GGAG TTTTTTCTTCGAAGT Tpet_1757 1762837 - 1758233 - | alpha-2-macroglobulin domain-containing protein TERM 1857 1759503 - 1759486 - G 72 -8.5 -3.83568 | GGAGAGCCAGAATAA CAAAGGA CGTG TCCTTTG TGGAAGTCCAGAAGG TERM 1858 1760962 - 1760950 - G 76 -7.7 -4.36411 | CATCAACGAGGAAAA GACAG ACT CTGTC CACATTCGATTCGAT TERM 1859 1762993 - 1763007 + H 79 -2.8 -5.40072 | opp_overlap 1763002 AGAATGTTATCATTT TCACAA GGA TTGAGA TTTTTTTCACAAAAA TERM 1860 1763222 - 1763211 - g 70 -2.2 -5.07107 | GAAACTGTCAAAAAA CTCG GCCA CGAA GTTCTGGAAATCGAA Tpet_1758 1763043 - 1763282 + | SirA family protein Tpet_1759 1763298 - 1764296 + | protein of unknown function DUF395, YeeE/YedE Tpet_1760 1764313 - 1764669 + | DsrE family protein Tpet_1761 1764679 - 1765032 + | hypothetical protein Tpet_1762 1765044 - 1765307 + | DsrH family protein TERM 1861 1765349 - 1765367 + F 100 -13.1 -4.08216 | opp_overlap 1765348 1765343 CTAAGTCAACAGCAG GCCGCGG CTCGT CCGCGGC TTTTGCAGAAGGTGG TERM 1862 1765799 - 1765779 - g 75 -6.1 -4.49311 | overlap 1765782 1765791 ATCACGACCAGAAAA GAACTGGAA AAA CTCCAGCCC GGAGAAACCTTGATC TERM 1863 1765796 - 1765782 - g 72 -6.4 -4.35644 | overlap 1765779 1765791 ACGACCAGAAAAGAA CTGGAA AAA CTCCAG CCCGGAGAAACCTTG TERM 1864 1765803 - 1765791 - g 74 -5.5 -4.7153 | overlap 1765782 1765779 AAAGAACTGGAAAAA CTCCA GCC CGGAG AAACCTTGATCATAG Tpet_1763 1765389 - 1765934 + | SirA family protein TERM 1865 1767045 - 1767017 - g 73 -4 -4.80453 | gap 1 TTATCAGAAAATAAA TGAAAAGGACTCA ATCG TGA-CCCTTTCCA ATTGTGTAAAAACGG TERM 1866 1767800 - 1767780 - g 79 -9.7 -3.67976 | GCCATCAATGGTAAA CTGGACGGT TTC ATCGTCCAG AAATTGAAGGAGATA Tpet_1765 1766622 - 1767932 + | metal dependent phosphohydrolase Tpet_1766 1767957 - 1769774 + | methyl-accepting chemotaxis sensory transducer TERM 1867 1769798 - 1769816 + F 100 -12.4 -5.52384 | opp_overlap 1769796 AAAAACACACAATGC GGGGAGCC TTT GGCTCCTC TTTTTTTAATCACAA TERM 1868 1769968 - 1769932 - f 73 -9 -3.56643 | gap 1, opp_overlap 1769926 TGGATACTTTTCAAA TCGTAGTGTCGTAAAAT TGAC ATTTTACGACACAA-GA AAATTGAACTCTTAT TERM 1869 1770195 - 1770176 - g 84 -7.9 -4.79955 | opp_overlap 1770176 1770175 ACATTGATAAGAAAA GCCTTTG AAGATA CAAAGGC CTTTTACTACTTTGT TERM 1870 1771275 - 1771262 - g 72 -6.7 -4.32048 | GAAGAATATCGAAAA CTCCT TCTG AGGAG CGAATATGTGAACAC TERM 1871 1771323 - 1771299 - g 76 -4.3 -4.98436 | TGAACACTAGAAAAA GAAGAAAGATC TAC GCTCTTTTTTC CAGAAGTGGCTTTGA Tpet_1767 1770053 - 1771423 + | ATPase TERM 1872 1771782 - 1771807 + G 71 -3.4 -4.75309 | gap 1 TCTCCCTCAGAGTTC GAAGAGGTCTT AAAAG AAG-CCTTTTC TTTTCTTGGATTTGA Tpet_1768 1771464 - 1773218 + | hypothetical protein Tpet_1769 1774665 - 1773271 - | type III restriction enzyme, res subunit Tpet_1770 1774864 - 1774646 - | hypothetical protein Tpet_1771 1775273 - 1774866 - | hypothetical protein Tpet_1772 1778047 - 1775297 - | adenine-specific DNA methylase Tpet_1773 1779111 - 1778044 - | hypothetical protein Tpet_1774 1779405 - 1779184 - | hypothetical protein Tpet_1775 1780386 - 1779490 - | alkaline phosphatase domain-containing protein Tpet_1776 1782820 - 1780376 - | AAA family ATPase TERM 1873 1782966 - 1782943 - R 100 -14.6 -5.093 | TGGAAAACAATAAAA CAGACCCTCC AGAG GGAGGGCCTG GAAACGTCAGAATTT Tpet_1777 1784285 - 1782987 - | putative PAS/PAC sensor protein TERM 1874 1784035 - 1784012 - G 76 -11.8 -2.70946 | gap 1, opp_overlap 1784012 1784012 1784013, overlap 1784011 TCTCCTCATAAAGAG TCCTCAGAGGG TGA CCCTCTG-GGA GGTTTTCTATTTCTC TERM 1875 1784012 - 1784037 + g 88 -8.3 -4.87328 | gap 1, opp_overlap 1784012 1784011, overlap 1784012 1784013 TCTCCTCATAAAGAG TC-CTCAGAGGG TGA CCCTCTGGGAGG TTTTCTATTTCTCTG TERM 1876 1784012 - 1784035 + g 76 -11.8 -2.68835 | gap 1, opp_overlap 1784012 1784011, overlap 1784012 1784013 TCTCCTCATAAAGAG TCCTCAGAGGG TGA CCCTCTG-GGA GGTTTTCTATTTCTC TERM 1877 1784013 - 1784036 + g 75 -9.6 -3.5077 | gap 1, opp_overlap 1784012 1784011, overlap 1784012 1784012 CTCCTCATAAAGAGT C-CTCAGAGGG TGA CCCTCTGGGAG GTTTTCTATTTCTCT TERM 1878 1784889 - 1784899 + G 78 -5.4 -4.8048 | CGATGGAAGCAGGAC CATG CTC CATG TTTTTGATATCGACG TERM 1879 1786180 - 1786194 + G 72 -2.9 -4.91852 | CCTGAAAATATCCTG GAAAA GAACA TTTTC TTTGTTTTTACTGGA TERM 1880 1786352 - 1786342 - g 72 -5.4 -4.49981 | CAGATCACCATAAAA TCCA GTG TGGA TGAGATCTGCATCTC TERM 1881 1787754 - 1787740 - g 74 -8.6 -3.84451 | overlap 1787735 1787743 CTTGTGAAATGGAAA GAGTTC CCT GAACTC CAGAAAAAACTGGTT Tpet_1778 1784464 - 1788522 + | alpha-2-macroglobulin domain-containing protein Tpet_1779 1788651 - 1789298 + | diguanylate cyclase TERM 1882 1789888 - 1789862 - g 100 -11.7 -4.82901 | gap 1 TTTCTTCGAGAAAAA GCCCTCTGT-TC GCTC GATACAGAGGGC CGTCAAACGATACGC Tpet_1780 1789320 - 1790090 + | phage integrase family protein Tpet_1781 1791072 - 1790266 - | ExsB family protein Tpet_1782 1791824 - 1791069 - | NCAIR mutase (PurE)-related protein-like protein TERM 1883 1791518 - 1791533 + g 78 -4.7 -4.95484 | opp_overlap 1791518 TCTTCTTCACAACCA GAAGC CTGCCT GCTTC TTTTATTTCATACTC Tpet_1783 1793010 - 1791817 - | hypothetical protein TERM 1884 1793413 - 1793397 - g 72 -2.9 -4.99568 | opp_overlap 1793397 1793400, overlap 1793399 GAAGATCAAAGAAAA GATCGTC GAA AACGAAC GTTTTGCACCACTTG TERM 1885 1793700 - 1793680 - g 83 -6.1 -4.99638 | AGAGTGAGAGAAAAA CTCAACGAA CTC TTCGACGAG CTCAAAAACATAAGA Tpet_1784 1793149 - 1794795 + | M3 family oligoendopeptidase TERM 1886 1794865 - 1794895 + F 100 -16.3 -5.18371 | overlap 1794859 1794850 CCTGAAGAGGGCTGA TGGCCTCTACTGG CTTGA TCAGTAGAGGCCA TTTTCTTTTGTGGGA TERM 1887 1795994 - 1796008 + G 73 -4.2 -4.85782 | GGGACTTCCCATTCC CGCG AGACGAG CGCG TTTGTTTTTACCCGA Tpet_1785 1794921 - 1796438 + | DNA mismatch repair protein MutS domain-containing protein TERM 1888 1796793 - 1796783 - g 72 -5.4 -4.37658 | AACGGCTCCAGAAAA GCTT TAG AAGC CATGCTGGTAGCGCT Tpet_1786 1796435 - 1797940 + | DNA mismatch repair protein MutS domain-containing protein Tpet_1787 1798642 - 1797926 - | hypothetical protein Tpet_1788 1799268 - 1798642 - | LemA family protein Tpet_1789 1799443 - 1800336 + | ribokinase Tpet_1790 1800333 - 1801346 + | periplasmic binding protein/LacI transcriptional regulator Tpet_1791 1801324 - 1801731 + | D-ribose pyranase TERM 1889 1802682 - 1802671 - g 86 -4.4 -5.59962 | opp_overlap 1802671 GAAAAGAAATAAAAA GACT AGAT AGTC CTTTAGATGCTTTAG Tpet_1792 1801728 - 1803212 + | ABC transporter related TERM 1890 1803495 - 1803506 + G 70 -2.2 -4.98616 | TGTTGGCAGGCCTGG GAGT TGGT GCTC TTTTTGGTCTTTTCA Tpet_1793 1803209 - 1804129 + | monosaccharide-transporting ATPase Tpet_1794 1804160 - 1805047 + | monosaccharide-transporting ATPase TERM 1891 1805058 - 1805082 + T 100 -18.7 -4.40358 | opp_overlap 1805051 1805060 AGTGAAGAGCCTAAG GAGGGTGGGAA TTC TTCCCACCCTC TTTTATAAAATACCT TERM 1892 1805080 - 1805060 - T 93 -15.5 -2.75535 | opp_overlap 1805058, overlap 1805051 TGAAGAGCCTAAGGA GGGTGGGAA TTC TTCCCACCC TCTTTTATAAAATAC Tpet_1795 1805774 - 1805085 - | radical SAM domain-containing protein TERM 1893 1805145 - 1805171 + g 80 -5.8 -4.91473 | overlap 1805161 TTTTTCCAGATACTC CTTCTCTATCCT GCA AGGAACGGGAAG TTTCTTTTTGAGTTC TERM 1894 1805393 - 1805375 - G 87 -9.6 -4.22346 | overlap 1805368 CAAAGTCAGTGAAAA GATCCACC AGG GATGGATC GTAGCCAAACAAAAT TERM 1895 1806450 - 1806418 - g 71 -6.9 -4.10161 | GACGATCCCCGAAAA CCCACCGAACGATCG CTA CGGTCTTCCGATGAG CATAAAAATCCCAAA Tpet_1796 1805795 - 1806553 + | hypothetical protein Tpet_1797 1806810 - 1808081 + | PhoPQ-activated pathogenicity-related protein-like protein Tpet_1798 1809054 - 1808137 - | hypothetical protein TERM 1896 1809032 - 1809005 - G 100 -18.6 -3.90744 | opp_overlap 1809005 1809009 TCTCTTTTCAAAGAA TCAACGAGGGTG ATGA CACCCTCGTTGA TCGTTCCTCTCAAAG TERM 1897 1809005 - 1809032 + g 100 -18.6 -2.81547 | opp_overlap 1809005, overlap 1809009 TCTCTTTTCAAAGAA TCAACGAGGGTG ATGA CACCCTCGTTGA TCGTTCCTCTCAAAG TERM 1898 1809009 - 1809028 + g 90 -13.6 -3.2981 | opp_overlap 1809005, overlap 1809005 TTTTCAAAGAATCAA CGAGGGTG ATGA CACCCTCG TTGATCGTTCCTCTC Tpet_1799 1810424 - 1809105 - | glutamine synthetase, type I TERM 1899 1810555 - 1810522 - R 100 -2.3 -6.11019 | opp_overlap 1810526, overlap 1810525 1810526 AAAAATCAAAAAAAA CAATCCTTTCTGTCC CCGG GGACAGAGGGGTTTT TCTTTTTGCATCTTT TERM 1900 1810552 - 1810525 - R 74 -4 -5.01676 | opp_overlap 1810526, overlap 1810522 1810526 AATCAAAAAAAACAA TCCTTTCTGTCC CCGG GGACAGAGGGGT TTTTCTTTTTGCATC TERM 1901 1810526 - 1810551 + r 100 -11.9 -5.63236 | opp_overlap 1810526 1810525 1810522 ATCAAAAAAAACAAT CCTTTCTGTCC CCGG GGACAGAGGGG TTTTTCTTTTTGCAT Tpet_1800 1811878 - 1810607 - | hypothetical protein TERM 1902 1811859 - 1811839 - GR 80 -5.5 -4.92783 | opp_overlap 1811838 AACTCACCAGAAAAA TGAGAAAAA GAC TATTTCTCA AGTTTGTAAACTTCT Tpet_1801 1813082 - 1811850 - | hypothetical protein TERM 1903 1811937 - 1811923 - GR 82 -10 -3.93038 | opp_overlap 1811934 CAGCCGAAGATCAAA CTCCCT TTC AGGGAG AGTCCGCCGATCTGG Tpet_1802 1813972 - 1813058 - | RluA family pseudouridine synthase Tpet_1803 1814322 - 1813978 - | aspartate alpha-decarboxylase TERM 1904 1814772 - 1814761 - g 79 -3 -5.44119 | opp_overlap 1814761 GCGATTTGAAAAAAA CTTT TGAG AAAG TTCATGAAGCTTTGA Tpet_1804 1814352 - 1815152 + | methyltransferase type 12 Tpet_1805 1815149 - 1815505 + | PadR-like family transcriptional regulator Tpet_1806 1816713 - 1815493 - | amidohydrolase Tpet_1807 1817147 - 1816710 - | signal-transduction protein TERM 1905 1817039 - 1817071 + g 79 -7.8 -4.38927 | gap 1, opp_overlap 1817034, overlap 1817060 CAACATAAACGGTTC TCGT-GACGGGATCC TCCA GTATCCTGTCGACGA TTTCTTCTATAGGAG Tpet_1808 1818434 - 1817157 - | citrate transporter TERM 1906 1818337 - 1818321 - G 70 -5.1 -4.46073 | TTTGAACACAAGAAA GAGGG CAGCGCT CCCTC CGAGCATGGTGATGA TERM 1907 1818453 - 1818437 - H 73 -5.1 -4.63218 | overlap 1818440 CGTCTTCGAACAAAA TATCTCC CCC GGAGGTA AGAGATCGATGAAGA Tpet_1809 1818462 - 1819631 + | hypothetical protein Tpet_1810 1820046 - 1819612 - | restriction endonuclease TERM 1908 1819792 - 1819804 + g 79 -7.7 -4.46073 | overlap 1819801 CTTCACGACCTCTTT CTCCA CCG TGGAG TTTCTTCTCTTCACC Tpet_1811 1820443 - 1820036 - | hypothetical protein Tpet_1812 1820511 - 1821566 + | ATPase Tpet_1813 1821563 - 1822756 + | hypothetical protein Tpet_1814 1822753 - 1823493 + | hypothetical protein