TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.301656 %AT, 1947229 nt, 17380 terms. Intergenic: 0.343873 %AT, H2T: 208838 nt, 1265 terms; T2T: 62648 nt, 617 terms; H2H: 66106 nt, 827 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|55979969|ref|NC_006461.1| Thermus thermophilus HB8, complete genome (length 1849742) TERM 1 229 - 198 - g 93 -21.6 -3.14132 | CCTCTTCGGGACCAA CGGGGAGGTGGACC TCGA GGTCCGCCTCCCCG CCGAGGCCCAAAGCC TTHA0001 55 - 1182 + | DNA polymerase III, beta subunit TERM 2 2465 - 2437 - g 72 -13.1 -3.50853 | GCTGGCCAAGTACAA CCAGCTCCTGCGC ATT GAGGAGGAGCTGG GCCGGGCCGCGAGGT TTHA0002 1235 - 2503 + | enolase (2-phosphoglycerate dehydratase) TTHA0003 2490 - 3914 + | pyruvate kinase TTHA0004 4895 - 3915 - | hypothetical protein TTHA0005 5506 - 4892 - | metallo-beta-lactamase family protein TERM 3 5060 - 5033 - G 76 -15.6 -3.14132 | GTCCTCGTTGATGAA CCTCGGGGGAAG GCCC CTTCCCCTGAGG GCGTCCCCGGCCAGG TTHA0006 7340 - 5493 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 4 5963 - 5982 + g 72 -3.5 -4.59773 | overlap 5937 AGCGGATGGCCACGG GGCCC CCCACCTCCA GGGCC TTTTTCAGCATGGCC TTHA0007 7993 - 7349 - | hypothetical protein TERM 5 7432 - 7442 + g 76 -8.2 -4.26076 | opp_overlap 7423 ACCAGACCTCGTAGA GGGC CTC GCCC TTTTCGTCCCGGTAG TTHA0008 8699 - 8037 - | phage shock protein A TERM 6 8269 - 8288 + g 81 -2.1 -5.0133 | overlap 8258 8257 GCGGCCTCCACCCCC TTCTTCC GGGCGA GGAGGAG TTTTTTGCGGGCCTC TTHA0009 8799 - 8969 + | hypothetical protein TTHA0010 9022 - 9114 + | hypothetical protein TERM 7 9760 - 9749 - f 72 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAGCCT TERM 8 11071 - 11058 - f 79 -4.5 -4.7254 | ACTGTTTACCAAAAA CACAG CTCT CTGCG AACTCGTAAGAGGAG TERM 9 11703 - 11687 - f 77 -7.3 -4.48221 | overlap 11679 11691 GATCAACGGATAAAA GTTACCC CGG GGATAAC AGGCTGATCTCCCCC TERM 10 12446 - 12480 + F 75 -15.8 -2.71924 | opp_overlap 12451 12467 12468, overlap 12451 12468 CTCCCGCTCCAATAC CCAAACCCCCCAGG ACAAAAA CCTGGGGGGTTTTG CTTTGCCCCCCGGTG TERM 11 12451 - 12475 + F 100 -14.3 -4.54727 | opp_overlap 12451 12467 12468, overlap 12446 12468 GCTCCAATACCCAAA CCCCCCAGG ACAAAAA CCTGGGGGG TTTTGCTTTGCCCCC TERM 12 12475 - 12451 - f 83 -14.3 -3.76373 | opp_overlap 12451 12446 12468, overlap 12467 12468 GCTCCAATACCCAAA CCCCCCAGG ACAAAAA CCTGGGGGG TTTTGCTTTGCCCCC TERM 13 12493 - 12467 - f 82 -4.4 -4.91109 | gap 1, opp_overlap 12451 12446 12468 12486, overlap 12451 12468 CCCCCAGGACAAAAA CCTGGGGGG TTTTGCTTTG CCCCCC-GG TGGTATTAAGATGGG TERM 14 13258 - 13283 + G 75 -5.4 -4.57073 | opp_overlap 13269, overlap 13243 GCCCAGGGCACGGTG GGCTTCATCA ACCCGG TGACGGAGCC TTTTTGCACCCACTG TTHA0011 12493 - 13503 + | molybdenum cofactor biosynthesis protein A (MoaA) TTHA0012 14311 - 13481 - | integral membrane protein TERM 15 13987 - 13955 - G 75 -11.1 -3.92522 | overlap 13930 GGCCAAGGCCAGAAA GGCCGCGAGGAAGGC CGG GCCCACCTCCCTGCC GGCAAGCCTCAGGAG TTHA0013 14329 - 15321 + | geranylgeranyl diphosphate synthetase TTHA0014 15508 - 16104 + | hypothetical protein TERM 16 16253 - 16222 - g 81 -8.6 -4.54727 | overlap 16223 16226 16248 GGCCCTAAAGGAAAA GGGAGAGCTCGTGG TCTA CCACGAGATCGTCC ACAACCGGGTGGTGG TTHA0015 16106 - 17128 + | LytB protein TTHA0017 18677 - 18045 - | TPR repeat-containing protein TTHA0016 17121 - 18149 + | tRNA-dihydrouridine synthase A TTHA0018 20001 - 18679 - | glycogen synthase (starch [ glycogen] synthase) TERM 17 18847 - 18837 - G 74 -4.6 -4.58395 | GGTAGGTCTCAAAAA GGAC CCC GCCC CTCCCGTCCTCCACG TERM 18 19029 - 19039 + g 76 -8.2 -4.30576 | CGGGGAGGAAGCGTA CCCC TTC GGGG TTTTCCTCCTCCGCC TERM 19 19561 - 19540 - G 74 -7.2 -4.25256 | opp_overlap 19545 GGTCCAGGAAAAGAA GAGCCCCG GGTCCA CGAGGCCC TGGTGGGCCAGGTTG TTHA0019 20374 - 20003 - | hypothetical protein TTHA0020 21072 - 20401 - | response regulator TTHA0021 21767 - 21081 - | putative NADPH oxidoreductase TTHA0022 23014 - 21770 - | glucose-1-phosphate adenylyltransferase TERM 20 22794 - 22781 - G 72 -3.7 -4.56597 | GTGGTCCTCCAAAAA GGCCC CGAA GCGCC AGTAGCGCTGGATGT TERM 21 23310 - 23349 + G 80 -17.2 -3.14344 | gap 1 TCCCCTGGGGGAGGA GGCCTTCCCCCTCCTCCTC CCC GAGGGGGAGG-GCAGGGCC TTGGTGGAAGGGGTG TERM 22 23921 - 23956 + G 80 -9.5 -4.30576 | overlap 23916 23916 CCCACCTGGGCCTCC TCCGGCCCGGGGCCC TGATGC GGGCCGCGGGGGGGG TTTTGGTCCTCGAGG TTHA0023 23080 - 25173 + | putative ATP-dependent protease La TERM 23 25213 - 25168 - T 71 -9.5 -3.87815 | opp_overlap 25177, overlap 25169 25177 GGGGACGGGGAGAAA GGCTAAGCACCCCACCGCGGC TTTC GCCGCGGTGGGGGCCCCAAAA GGAAGCTTTCCAAGC TERM 24 25204 - 25177 - T 100 -24.2 -2.77994 | opp_overlap 25177, overlap 25169 25168 GAGAAAGGCTAAGCA CCCCACCGCGGC TTTC GCCGCGGTGGGG GCCCCAAAAGGAAGC TERM 25 25339 - 25295 - T 74 -7.8 -4.17048 | gap 2, opp_overlap 25281 CGGGCTCCAAAAGAA GC-GCCCTTCCCTCCCC-CGCG AAG CGCATGGGGAGGTAATCGCCGC GCCGCCAAAAGGAGA TTHA0024 27593 - 25272 - | penicillin acylase II precursor TERM 26 27555 - 27539 - G 79 -7.9 -4.46404 | overlap 27548 CAAGGAAGAGGAAAA GGCCCAA AAG CCGGGCC AGCCCCCGCAAGAAG TTHA0025 27605 - 28078 + | hypothetical protein TTHA0026 28088 - 28297 + | hypothetical protein TERM 27 28962 - 28922 - g 74 -9.5 -4.08216 | opp_overlap 28922, overlap 28925 GGAGCGGGTGGAAAA CGAGATCCTCCCCGAGGCG GAG CGCTTCGGGATGGGCCTGG TGGTCTGGAGCCCCC TTHA0027 28350 - 29300 + | potassium channel, beta subunit (oxidoreductase) TERM 28 29440 - 29462 + G 78 -9 -4.3586 | overlap 29419 GGCCGATCTCGGCGG GGGGGTGGCC ACC GGCTTCCTCC TTTTGCTCTACCTCC TTHA0028 29417 - 30448 + | putative macrolide-efflux protein TERM 29 30672 - 30614 - g 75 -13.9 -3.53012 | gap 2, opp_overlap 30630 30649, overlap 30625 TGGCCCTCCTCCAAA CCCCCCAAGAAGGCCTCCCGGAGGCCGAG CGC CTGGCCCTCCTGG-G-CTTTCTTGAGGGG CGGAAGGGGGACCTT TERM 30 30639 - 30625 - g 72 -11.4 -3.64283 | opp_overlap 30630, overlap 30614 CAAACCCCCCAAGAA GGCCTC CCG GAGGCC GAGCGCCTGGCCCTC TERM 31 31124 - 31113 - g 70 -2.2 -4.57073 | gap 1, overlap 31114 GAGGCGGGCCAAAAA CCTCC TCC GG-GG CCTCCTCCCTCTCCT TERM 32 31236 - 31260 + G 74 -7.8 -4.21194 | GGCCAAGGCCTTCCT CCCCCGGG AGGGCTGGC CCTGGGGG TTTTACCTCCTGGCC TTHA0029 30535 - 32013 + | hypothetical protein TERM 33 32656 - 32683 + G 70 -9.8 -3.84648 | opp_overlap 32676, overlap 32657 GCACGTAAGAATTTT TGCCGTGGCTTC CAAG GAACCCACGGCC TTTCGTGATGTTGCA TTHA0030 32270 - 33244 + | hypothetical protein TERM 34 33269 - 33305 + G 87 -11.6 -4.22214 | gap 1 GCCTTTTTCCATCCT GCTTGCTGCGG-AAGGC ATGC GCCTTTTCGCGGCGGGC TTCTTTTACCTCCCT TTHA0031 33231 - 34388 + | hypothetical protein TTHA0032 34463 - 34705 + | hypothetical protein TTHA0033 34687 - 35103 + | hypothetical protein TTHA0034 35234 - 36199 + | hypothetical protein TERM 35 36410 - 36395 - g 87 -3.2 -5.05782 | opp_overlap 36395 ACGGACCGCAAAAAA GCCC TCAGCTTC GGGC TTCTCTCTGGCAGTC TERM 36 36419 - 36433 + G 74 -2.1 -4.64861 | gap 1, overlap 36419 36420 TTCGGGCTTCTCTCT G-GCAG TCTC CTGCGC TTTCTTTTAGGAACA TTHA0035 36233 - 37336 + | hypothetical protein TTHA0036 37564 - 38499 + | hypothetical protein TTHA0037 38506 - 39657 + | hypothetical protein TTHA0038 39654 - 40811 + | hypothetical protein TTHA0039 40878 - 41126 + | hypothetical protein TTHA0040 41137 - 42486 + | FAD/FMN-containing dehydrogenase TERM 37 42545 - 42501 - T 85 -15.5 -3.65314 | overlap 42491 42502 GGGAAGGCCGAAGAA GGCCCGGGCCCGGCGGAGGAG CTC CTCCCCCTCCAGGCCCTGGAA GAGGAAGGCGCTCCG TERM 38 42544 - 42502 - T 87 -19 -2.78867 | overlap 42491 42501 GGAAGGCCGAAGAAG GCCCGGGCCCGGCGGAGGAG CTC CTCCCCCTCCAGGCCCTGGA AGAGGAAGGCGCTCC TTHA0041 43064 - 42483 - | hypothetical protein TERM 39 43321 - 43294 - R 100 -15.6 -5.14965 | gap 1, opp_overlap 43291 43295, overlap 43295 43296 ACCTGGACCAAAAAA CGCTCCCCGCCCC CTC GGGGCGGGAAG-G TCCTTCTTGCCCCGT TERM 40 43321 - 43295 - R 85 -15.8 -3.68256 | opp_overlap 43291 43295, overlap 43294 43296 CCTGGACCAAAAAAC GCTCCCCGCCCC CTC GGGGCGGGAAGG TCCTTCTTGCCCCGT TERM 41 43320 - 43296 - R 93 -19.3 -2.80472 | opp_overlap 43295 43291, overlap 43294 43295 CTGGACCAAAAAACG CTCCCCGCCCC CTC GGGGCGGGAAG GTCCTTCTTGCCCCG rpmB 43665 - 43369 - | 50S ribosomal protein L28 TTHA0043 43731 - 44183 + | lipoprotein signal peptidase TTHA0044 45353 - 44202 - | putative Na(+)/H(+) antiporter TERM 42 44831 - 44811 - G 95 -4.6 -5.33785 | AAGGAGGAGAAAAAA GAGGGCGA TGATC CCGACCTC CTTCAGCAGGGAAAG TERM 43 45206 - 45192 - G 75 -5.6 -4.58283 | GAAGTCCGCCAAAAA CCCCAG GAT CTCGGG GAGGGCCACCCCTTG TERM 44 45364 - 45338 - G 70 -4.4 -4.45399 | gap 1, overlap 45330 AGACGAAGAGCAAAA GGAGG-CTACC GCTCAA GGTTGACCTCC GGCACCAAGAGGGTG TTHA0045 46635 - 45343 - | potassium uptake protein TrkA TERM 45 45977 - 45936 - G 72 -13 -3.53012 | overlap 45967 CCTCCGCCCGGCAAA GGGCGCCCACGCTCCC GAAGCGCCGG GGAAACGTGGGCTCCC CCCGGATCACCGCCC TERM 46 46535 - 46525 - G 74 -4.6 -4.56597 | CGCCTTCTCCAAAAA GGCC CTA AGCC GCGCCTCGTCCCGCT TTHA0046 47854 - 46697 - | aspartate aminotransferase TTHA0047 47885 - 48190 + | nucleotidyltransferase TTHA0048 48198 - 48557 + | hypothetical protein TTHA0049 49471 - 48554 - | diacylglycerol kinase-related protein TERM 47 49309 - 49326 + g 75 -14.1 -3.53811 | CCACGGCCACCACCC GGGCCCC CTCG GGGGCCC TTTGGGCAAGCTCGG TTHA0050 49489 - 50172 + | phosphoglycerate mutase family protein TERM 48 50209 - 50196 - gT 71 -9.5 -3.78022 | GCCACATGGACCAAA GCCCC GAAC GGGGC GTCCTCGCCCCGGAG TERM 49 50482 - 50452 - gT 74 -7.6 -4.25104 | gap 1, opp_overlap 50464 50467 CCCCCGGGAGGAAAA CGCCACCCTCC GGAAGGCCTT GGAGGG-GGCG GGCTTCGGCCTCCTC TTHA0051 50129 - 50983 + | hypothetical protein TTHA0052 51837 - 50953 - | putative deacetylase TERM 50 51180 - 51202 + g 75 -14.1 -3.48276 | opp_overlap 51175 51180 CGTTGTAGAAGACGA GGTCCGGGC GGAAG GCCCGGGCC TTCTCTAAGGCCCCC TERM 51 51452 - 51441 - G 72 -5.8 -4.42386 | opp_overlap 51421, overlap 51442 CCCGGAGCCAGAAAA TGGC CACG GCCA CGTCGTTGAAGAGGC TTHA0053 51878 - 52486 + | hypothetical protein TTHA0054 52922 - 52473 - | RNA methyltransferase TTHA0055 54457 - 52922 - | ATP-dependent DNA helicase RecG-related protein TERM 52 53479 - 53493 + g 71 -9.2 -4.08767 | AGAGGGCCTCGGCCA GGCGGG GGT TCCGCC TTTTGGGGGGGTGGC TERM 53 55143 - 55173 + G 81 -8.2 -4.57073 | overlap 55144 GCTTTTCGTCTACGC TCCCCTGGCCCA CTGGGTC TGGGGCGGGGGG TTTTTGGGGGCCCTG TTHA0056 54673 - 56013 + | ammonium transporter TTHA0057 56010 - 56360 + | nitrogen regulatory protein P-II TERM 54 56425 - 56464 + G 81 -15.7 -3.53444 | gap 1, opp_overlap 56414 56424 56425 TACATCCAGACCAAG GCCCCGGTGCCCTCGGCG CGGAT CGCCGAGGG-GCTGGGCC TTTCCCCCGCCCTGG TERM 55 57007 - 57027 + G 70 -2.3 -4.57073 | opp_overlap 57006, overlap 57007 GAGGCCCTGAAGGAG CCCGAGGCC AAG GACCCGGGG TTTTTGGAGCGGCTC TTHA0058 56365 - 57267 + | transcriptional repressor of class I heat-shock genes TTHA0059 57257 - 57928 + | molybdenum cofactor biosynthesis protein D/E TTHA0060 57999 - 58238 + | hypothetical protein TTHA0061 58545 - 58225 - | hypothetical protein TTHA0062 59637 - 58555 - | alanine racemase TTHA0063 61763 - 59652 - | primosomal protein N TERM 56 60907 - 60888 - G 75 -5.6 -4.56597 | gap 1, overlap 60890 CGGCCTCCGGAAAAA CCGCTCCCG GAC CGGGC-CGG AAAGCCCCCCGTGGT TERM 57 61562 - 61551 - G 75 -5.8 -4.56597 | opp_overlap 61537 CGCCTCTTCCAAAAA GAGG ATCT CCTC CGGGCGCAGGTAGGG TERM 58 61692 - 61672 - G 71 -8.2 -4.07687 | opp_overlap 61688 ACCTCCCCCCGAAAA GGAACGGC CACCC GCCGCCCC AAGGCCTCCTCTCCC TERM 59 62035 - 62051 + G 70 -4.3 -4.34402 | overlap 61987 62027 62030 GGGCGGGGTCCTGGG GGCTTTG AGC CCGAGCC TTTTCCTCTGGACCC TERM 60 62248 - 62258 + G 73 -6.8 -4.3586 | overlap 62231 GGGCCTGGGGGTGCG GGAG GCC CTCC TTTTCCTCTCCCTCC TTHA0064 61796 - 62854 + | hypothetical protein TERM 61 63203 - 63232 + G 71 -9.1 -4.08692 | overlap 63191 CTGCGCCTGCGCCCC GGGCGGGCCCAGG CCTT CCTGCGGCGGCCC TTTTCCGGGAGCTTC TTHA0065 62864 - 63523 + | glycolate oxidase subunit GlcE TTHA0066 63528 - 63887 + | hypothetical protein TERM 62 63924 - 63881 - T 100 -11.7 -4.4078 | gap 2, overlap 63893 63923 CCTGCGGAAGGAAAA GGCCTGAACCTACCCCCCGGC GAAG GCCGGGGTG--GGATCAGACC CAGACCAGGCCGAGC TERM 63 63939 - 63972 + T 80 -17.5 -2.70932 | gap 1, opp_overlap 63923 63932 CCAGACCAGGCCGAG CCGG-GCCTCCAGGTG GCC CACCTCGAGGCCCCGG TGGTTGCGCACGGGG TTHA0067 64898 - 63918 - | L-asparaginase II TERM 64 64326 - 64308 - G 91 -17.4 -3.75024 | CGCCAGGAGGAAGAA GGCCCGGG CGG CCCGGGCC AAGGAGAGGGCGAAG TTHA0068 65179 - 64895 - | hypothetical protein TTHA0069 65117 - 65998 + | ABC transporter, periplasmic binding protein TTHA0070 66001 - 66636 + | ABC transporter permease protein TERM 65 66927 - 66872 - g 70 -13.3 -3.28924 | gap 3, overlap 66873 GAGCGTCCTGGACAA CGCCGCCTTCG-GCCTCCTCCTCCACGG CGT CCCCCG-GGAGGAGGCGCGTAGGCGG-G CCCAAGCCCGGCTCA TTHA0071 66633 - 67307 + | ABC-transporter, ATP-binding subunit TERM 66 68458 - 68474 + GT 74 -15.1 -3.02471 | GGTGGTGAGCGTCTA CCGCCCC TGG GGGGCGG TCTATCTGGTGGGGC TTHA0073 68753 - 68490 - | hypothetical protein TTHA0072 67430 - 68548 + | hypothetical protein TTHA0074 71245 - 68753 - | DNA topoisomerase IA TERM 67 71399 - 71372 - H 70 -11.2 -3.53563 | ACACTTGCGCCCAAA CCCAACCGGTAG TAGC CTTCCGGATGGG TGCCCCAAGATATGG TTHA0075 71430 - 78038 + | ribonucleoside-diphosphate reductase TERM 68 78121 - 78082 - f 85 -14.2 -4.09739 | gap 1, opp_overlap 78096 78097 CTAAGGCCCCCAAAA GGCGCGCGGGCGCTCGGGC CGG GCCCAAAGGCCCG-GCCCC TTATACTGGCCCTGT TERM 69 78096 - 78121 + F 87 -17.5 -3.41229 | opp_overlap 78082, overlap 78097 AGGCGCGCGGGCGCT CGGGCCGGGCC CAAA GGCCCGGCCCC TTATACTGGCCCTGT TERM 70 78097 - 78120 + F 100 -21 -2.64416 | opp_overlap 78082, overlap 78096 GGCGCGCGGGCGCTC GGGCCGGGCC CAAA GGCCCGGCCC CTTATACTGGCCCTG TTHA0076 78135 - 78746 + | phosphoribosylanthranilate isomerase TERM 71 78929 - 78949 + G 73 -11.1 -3.85698 | overlap 78930 AAGGGCCTCCTCCTC TCCCGCTTC CCC GAGGCGGGG TTTCTGGGGGAGGAA TTHA0077 78743 - 79537 + | inositol monophophatase family protein TTHA0078 80332 - 79613 - | hypothetical protein TERM 72 79919 - 79939 + g 72 -6 -4.36914 | opp_overlap 79910 AACCAACCTCGGCTC GGGGACCG GGTAG TGGACCCC TTTTCTGCGGAAGAA TTHA0079 80571 - 80335 - | hypothetical protein TERM 73 80907 - 80874 - R 91 -12.3 -4.19817 | opp_overlap 80879 GCTACTGAGCGAAAA GCCGAGCCTCCCGCC CCAG GGCGGGAGGCTTTTC TGGTGGAGCCGAGGG TERM 74 80879 - 80902 + r 100 -19.6 -4.46212 | opp_overlap 80874 TGAGCGAAAAGCCGA GCCTCCCGCC CCAG GGCGGGAGGC TTTTCTGGTGGAGCC TTHA0080 81359 - 81021 - | hypothetical protein TTHA0081 81423 - 82061 + | hypothetical protein TTHA0082 82058 - 82801 + | phosphoesterase ksgA 82794 - 83609 + | dimethyladenosine transferase TERM 75 83598 - 83636 + F 70 -11.1 -3.60094 | overlap 83597 83595 AGGGAGGGCCTCGAG GGGGCGGTGTAGG CCCGCCTCCCTTC CCTACACCGTCCC TTCTCCTTCTGTGTA TERM 76 83806 - 83818 + G 71 -6.9 -4.1822 | CACGCTGATCTACGT GGGGG TGG CCCTC TTTATTGGGGTGGCG TTHA0084 83765 - 84124 + | NADH-quinone oxidoreductase chain 7 TTHA0085 84115 - 84660 + | NADH-quinone oxidoreductase chain 6 TTHA0086 84664 - 85287 + | NADH-quinone oxidoreductase chain 5 TTHA0087 85284 - 86513 + | NADH-quinone oxidoreductase chain 4 TTHA0088 86524 - 87069 + | NADH-quinone oxidoreductase chain 2 TERM 77 88137 - 88160 + G 70 -13.8 -3.21416 | overlap 88159 TGCGGCAAGTGCACC CCCTGCCGCG AGGG CGTGGCGGGG TTCATGGTGAACCTC TTHA0089 87066 - 88382 + | NADH-quinone oxidoreductase chain 1 TTHA0090 88384 - 90735 + | NADH-quinone oxidoreductase chain 3 TTHA0091 90732 - 91829 + | NADH-quinone oxidoreductase chain 8 TTHA0092 91826 - 92374 + | NADH-quinone oxidoreductase chain 9 TTHA0093 92371 - 92901 + | NADH-quinone oxidoreductase chain 10 TTHA0094 92898 - 93185 + | NADH-quinone oxidoreductase chain 11 TTHA0095 93188 - 95008 + | NADH-quinone oxidoreductase chain 12 TERM 78 95062 - 95077 + G 71 -8.2 -4.07568 | CTCCTTTTGGGCCTG CCCCGG GCCC TCGGGG TTTTGGGGGCGGGGC TERM 79 96103 - 96132 + G 73 -9.3 -3.88291 | overlap 96101 CTCGCCATGGTGGGC CTCCCCGGG CTTTCCGGCTTC CCCGGGGAG TTTCTGACCCTCCTC TERM 80 96177 - 96159 - g 75 -14.6 -3.28712 | opp_overlap 96148 96150 CCTCGGGGCCTACAA GGCAAGCC CCT GGCTTGCC GCCTTGGCCTTCCTC TTHA0096 95002 - 96411 + | NADH-quinone oxidoreductase chain 13 TTHA0097 96408 - 97691 + | NADH-quinone oxidoreductase chain 14 TERM 81 97802 - 97821 + G 84 -10.7 -4.19238 | opp_overlap 97801 97800 CCCCAAGGACAAACC GGGGGAC TACGGC GTCCCCC TTTTCGCCTTGGCCA TERM 82 98105 - 98130 + G 76 -8.9 -4.30844 | overlap 98107 GGACGCCATCGCCCG CATCCTGGCCT ACGC GGGCCGGGAGG TTTTGGTCCTCAACT TERM 83 98521 - 98479 - g 79 -13.5 -3.72576 | opp_overlap 98436, overlap 98456 98513 CCCTCCTGGAGCAAA GCCCCCACGT-CTTCCGCCCC CGG GAGG-GGAAGTACGCCGGGGC CCTGGTCATGGACGC argS 97704 - 99482 + | arginyl-tRNA synthetase TERM 84 100429 - 100413 - g 75 -13.7 -3.50853 | GGCGGTGAAGGACAA GGCGGAC GTC GTCCGCC TGGTGGCCCAGCGCC TTHA0099 99487 - 100533 + | serine protease TTHA0100 100538 - 101986 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase TTHA0101 102572 - 101955 - | TetR family transcriptional regulator TERM 85 102516 - 102544 + g 100 -9.6 -5.67967 | gap 1, opp_overlap 102509, overlap 102515 GCGGAAAAGCTCCAT GGCGGCGCGGA AGATCCGC TCC-CGCCGCC TTTTTTTCTGGTACT TTHA0102 103081 - 102578 - | hypothetical protein TTHA0103 103936 - 103082 - | putative oxidoreductase TTHA0104 104319 - 104002 - | hypothetical protein TERM 86 104460 - 104481 + G 95 -18.7 -3.7014 | CCGACCAGCGCGAAG GGCCCGCCC AAAA GGGCGGGCC TTCTGTTACCCTTTA TTHA0105 104416 - 104943 + | hypothetical protein TERM 87 105010 - 105045 + T 72 -8.8 -4.05446 | overlap 105011 GCCTTAGCCCAGCAG GGCGAGGCGGAGGGCC TTCA GGTTCTCCGCCACGGG TTTGTCGTTGAAGAG TTHA0106 105660 - 104998 - | ribulose-phosphate 3-epimerase TTHA0107 106085 - 105660 - | hypothetical protein TERM 88 106014 - 105974 - G 76 -8.9 -4.25104 | overlap 106007 CGCCCCCCAGGAAAA GCCCCACGCCCTGGACCAG GGC CTCGCCCAAGACGTAGACC GCCCCCAGGACCACG TTHA0108 108095 - 106140 - | transketolase TERM 89 108299 - 108273 - R 72 -12.9 -3.14132 | opp_overlap 108274 CTCCGGGCGCACCAA GGCCCCGCCCC TTCGG GAGGCGGGGCT TTTCTTCGCCCTGGC TERM 90 108274 - 108298 + r 100 -15 -4.64676 | gap 1, opp_overlap 108273 TCCGGGCGCACCAAG GCCCCGCC-CC TTCG GGAGGCGGGGC TTTTCTTCGCCCTGG TTHA0109 109898 - 108345 - | ATP-dependent RNA helicase TERM 91 108522 - 108561 + g 75 -15 -3.35679 | gap 1, opp_overlap 108521 CTGCCCCTTCAAGAG GGCCAC-GAGCCGGGGC AGGGAGA GCCTCGGCCCCGTGGCC TTGTAGGTGCGCCAC TTHA0110 111160 - 109949 - | molybdopterin biosynthesis MoeA TTHA0111 112300 - 111167 - | hypothetical protein TTHA0112 112980 - 112318 - | endonuclease III TTHA0113 112995 - 113360 + | hypothetical protein TTHA0114 115083 - 113326 - | ABC transporter ATP-binding protein TERM 92 115118 - 115086 - R 71 -12.6 -3.33162 | gap 1, overlap 115056 115087 CATGGTACCCCATAA GGCGCGGGGCGCCCC TCGA GGGGCGCCCCG-GAA GCGCCCTTCCCCCTC TERM 93 115117 - 115087 - R 77 -16.1 -2.59683 | gap 1, overlap 115056 115086 ATGGTACCCCATAAG GCGCGGGGCGCCCC TCGA GGGGCGCCCCG-GA AGCGCCCTTCCCCCT TTHA0115 116565 - 115132 - | prolyl-tRNA synthetase TTHA0116 116598 - 117818 + | cofactor-independent phosphoglycerate mutase TERM 94 118072 - 118090 + G 72 -3 -4.56597 | overlap 118064 118074 AACCGGACCTCGCCC TGCTCCGG CCG CGGGAGGA TTTTTACCGGGAAAG TTHA0117 117828 - 118376 + | hypothetical protein TTHA0118 119328 - 118354 - | exopolyphosphatase family protein TTHA0119 120412 - 119525 - | putative acetyltransferase TERM 95 120002 - 120026 + g 86 -9.3 -4.56597 | opp_overlap 120002 120021 GTAGCCCACGGAGAA CTCCACGTTCT GGA AGAACTTGGGG TTTTTCCCCACCCGC era 121362 - 120457 - | GTP-binding protein Era TERM 96 122366 - 122322 - g 84 -10.6 -4.25256 | gap 1, opp_overlap 122364, overlap 122323 CCTGCAGGAAAAGAA GGAGGCGCTCCCCGAGGCCCT GGCC ATGGCCCTGGGGATC-CCCCC GGAGCGGGTGCTCTC TTHA0121 121447 - 122451 + | competence protein DprA (SMF protein (DNA processing chain A)) TTHA0122 123363 - 122455 - | manganese-containing pseudocatalase TERM 97 123932 - 123964 + G 70 -13.3 -3.32819 | GAGGAGCGGCACCCA GGCCTCGGGGCCGAG CCC CTCTTCGCCGAGGCC TTCTGGGCCTATGTG TTHA0123 123473 - 124426 + | LysR family transcriptional regulator TTHA0124 124443 - 125369 + | branched-chain amino acid aminotransferase TTHA0125 125359 - 125547 + | hypothetical protein TTHA0126 125549 - 125788 + | hypothetical protein TTHA0127 126362 - 125778 - | tRNA (guanosine-2'-O-) methyltransferase TTHA0128 126979 - 126359 - | ATP phosphoribosyltransferase catalytic subunit hisZ 128061 - 126976 - | ATP phosphoribosyltransferase regulatory subunit TERM 98 127473 - 127522 + g 85 -8.5 -4.62783 | gap 1, opp_overlap 127503 127504, overlap 127472 GGAGGACCTTCCGCG CCTCCTCGGGGACG-GGGCTTTCT GCG AGAAGCCCCTTGAGCTCGGGGAGG TTTTTGCGGTGGATG dcd 128610 - 128065 - | deoxycytidine triphosphate deaminase TTHA0131 128641 - 129525 + | hypothetical protein TTHA0132 130001 - 129522 - | hypothetical protein TERM 99 130645 - 130702 + G 85 -17 -3.55444 | gap 2 CCTGGGGTCCATGGT CTCCGAGGGGATC-CGGGGGG-TGGTCC TCGA GGTCCAGCTCCCCGAGCCCCCCTTGGAG TTTGAACCCTACGCC TTHA0133 130031 - 130738 + | short chain dehydrogenase/reductase family oxidoreductase TTHA0134 130735 - 131196 + | transcriptional regulator NrdR TERM 100 131277 - 131299 + F 80 -9.1 -4.17132 | GCCAAGCATCTGAGC TCTACGCCC GTTTA GGGCGTTGA TTTGTTGGAGAGTTT TERM 101 132866 - 132883 + F 100 -14.1 -5.46657 | CTTCTCGGGTCCTCG GGGCGCC CTTG GGCGCCC TTTTTTGTTGCCGTA TERM 102 133253 - 133265 + G 74 -2.6 -4.72272 | GCCCCAGCTCACGGA GGTG GAGGA CGCC TTTTTCCTCCCGGCG TTHA0135 132909 - 133373 + | MutT/nudix family protein TTHA0136 134273 - 133326 - | LAO/AO transport system kinase TTHA0137 134693 - 134319 - | protein translation intiation inhibitor TTHA0138 136518 - 134698 - | serine/threonine protein kinase TERM 103 135600 - 135561 - G 84 -10.6 -4.26076 | gap 1, overlap 135562 CCACCCCGAGGAAAA CCCGCCC-GCCGGCGTAGA CCA TCTCCCCCGGCCAGGCGGC CTCTCCGCCCAGGTC TERM 104 135599 - 135562 - G 70 -14.1 -3.15324 | gap 1, overlap 135561 CACCCCGAGGAAAAC CCGCCC-GCCGGCGTAGA CCA TCTCCCCCGGCCAGGCGG CCTCTCCGCCCAGGT TERM 105 136386 - 136363 - G 73 -13.8 -3.36749 | GACCTCCAAGAGGAA GCGCTCCCGC TCGG GCGGGAGGGC CCGGGGGTGGAGGAG TTHA0139 136761 - 136528 - | hypothetical protein TERM 106 137333 - 137353 + G 70 -15.4 -2.85297 | overlap 137330 137328 TCCACGCCCGCAGGA CCCGCCCC CTCTC GGGGCGGG TGGTCTTTGACCTGC TERM 107 137767 - 137784 + G 75 -14.1 -3.53224 | CCCTTCCACGTGGAG GCCCGGG AGTA CCCGGGC TTTCCCACGGACCTC TTHA0140 136879 - 138156 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TTHA0141 138621 - 138178 - | hypothetical protein TERM 108 138504 - 138463 - G 70 -14.4 -3.14132 | gap 1 CTCCCCGGGGAGGAA GTGGGCGTAGCCCTGGGCC TCCAG GGCCC-GGGCCACCTCCAC CGCCTCGGCGTGGGA TTHA0142 138665 - 139801 + | peptide chain release factor 2 TTHA0143 140468 - 139806 - | phosphate transport system regulatory protein PhoU TTHA0144 141376 - 140483 - | sensor histidine kinase TTHA0145 142044 - 141373 - | phosphate regulon transcriptional regulatory protein PhoB TERM 109 142158 - 142107 - RH 89 -17.3 -3.53012 | gap 1, opp_overlap 142100 142099, overlap 142108 142153 TCTGGGCCCCGGAAA GGCCGGCTTTGGCCCGGGTCAGAG CAGTT CCCGCACCCGGGCCAAAGCCT-CC ACCGCCCGCCCCGGG TERM 110 142158 - 142108 - RH 80 -17.5 -2.71712 | opp_overlap 142100 142099, overlap 142107 142153 CTGGGCCCCGGAAAG GCCGGCTTTGGCCCGGGTCAGAG CAGTT CCCGCACCCGGGCCAAAGCCTCC ACCGCCCGCCCCGGG TTHA0146 143252 - 142125 - | alanyl-tRNA synthetase-related protein TERM 111 142373 - 142422 + gH 71 -12.3 -3.3506 | gap 3, overlap 142377 GGAGGGCCTTCTCCT CCAGGGCCCTGGGCAGGAGGGCCT CCGCA AGCCCCTCC--CTCAGGGCC-TGG TTCTCCCCCTTTAGG TTHA0147 143251 - 143469 + | hypothetical protein TERM 112 144173 - 144144 - g 85 -9.2 -4.72986 | GAGGCGGAGGAAAAA GCCCTCTACGCC GCCGTG GGCCTAGGGGGC GAGGACCCTGAGGAC TTHA0148 143466 - 144197 + | ribosomal large subunit pseudouridine synthase B TTHA0149 144509 - 144165 - | hypothetical protein TTHA0150 145229 - 144747 - | hypothetical protein TTHA0151 145818 - 145309 - | molybdopterin converting factor, subunit 1 (moaD) TERM 113 145861 - 145840 - R 100 -18.7 -3.76125 | overlap 145853 145854 TGAGTCTAAGGGAAA GCCCCGGCC CAAA GGCCGGGGC CACCCCGGGGAGGGC TTHA0152 147702 - 145876 - | tungsten-containing aldehyde:ferredoxin oxidoreductase TTHA0153 148786 - 147827 - | NADPH:quinone reductase TTHA0154 148859 - 149290 + | hypothetical protein TERM 114 149359 - 149398 + G 72 -12.8 -3.55444 | opp_overlap 149340 GCGCGGCTTAGGCTC GTCCTCCTCGGGGGGTGG TACC TCGTCCTCTGGGGAGGGC TTTGGGGAGTGGGAA TTHA0155 149287 - 149838 + | hypothetical protein TTHA0156 149814 - 150110 + | hypothetical protein TTHA0157 151235 - 150186 - | NADH-dependent flavin oxidoreductase TERM 115 150753 - 150741 - G 78 -2.6 -4.77036 | overlap 150742 CTCCACCACCAAAAA CCCC GCCCT GAGG GCCCGCTTGGCCCCC TERM 116 151624 - 151664 + G 75 -11.1 -3.9392 | gap 1, opp_overlap 151617 CGGAAAAGCCGGCGG GCGCCCTCACCCCGGAGG AGCGGG CCTTCGTGGTG-GAGCGC TTCTTTGACATCAAC TTHA0158 151266 - 154250 + | alpha-dextran endo-1,6-alpha-glucosidase ((amylo)pullulanase) TTHA0159 154269 - 154922 + | hypothetical protein TERM 117 154905 - 154959 + F 88 -7.5 -5.00884 | gap 1 CTGGCCTACCTCAAG CG-CAAGCTGGGTCCCTGAGGCCACC CCAT GGCGGCCCGGGGGCCCCGGCGAGACG TTTTTTGAGGAAGCT TTHA0160 155014 - 155715 + | hypothetical protein TTHA0161 158329 - 155693 - | leucyl-tRNA synthetase TERM 118 158370 - 158347 - R 100 -13.2 -5.00616 | gap 1, overlap 158348 CTCCTCCTCAAAAAA GCCCC-TCCCT GGG AGGGAAGGGGC CGCAAAAACCCTTCC TERM 119 158368 - 158348 - R 77 -13.3 -3.60048 | overlap 158347 TCCTCCTCAAAAAAG CCCCTCCCT GGG AGGGAAGGG GCCGCAAAAACCCTT TERM 120 158404 - 158379 - R 77 -6.7 -4.57341 | AAGGGGCCGCAAAAA CCCTTCCCCCC GCTA GGGACGTAGGG ACGCGCGCACGCCCC TERM 121 158488 - 158457 - R 100 -28.8 -3.25823 | opp_overlap 158428 158476 158479 158481 GCGCTTCCAGACGAA GGCCCCGCGCCGGA CCTT TCCGGCGCGGGGCC TGGGAAAGGGCCTCA rpsA 160111 - 158501 - | 30S ribosomal protein S1 TERM 122 160423 - 160442 + G 76 -11.4 -3.80625 | opp_overlap 160422 160423 160426, overlap 160426 CCCCCGGCACCAAAC CGAGGCCC GAAA GGGCCTTG TTTCGCTTATGCGGC TERM 123 160426 - 160439 + G 74 -9.5 -4.03167 | opp_overlap 160423 160422 160426, overlap 160423 CCGGCACCAAACCGA GGCCC GAAA GGGCC TTGTTTCGCTTATGC TERM 124 160496 - 160541 + G 73 -13.9 -3.31144 | gap 1, opp_overlap 160494, overlap 160497 TGCCTCGAGGACACC CAG-GCCCTGGCGGAGGAGGTC CTA GGCCTCCTCCCCCGGGGCGCCC TTGTGGCCCTCGAGG TERM 125 160497 - 160540 + G 75 -17.4 -2.58544 | gap 1, opp_overlap 160494, overlap 160496 GCCTCGAGGACACCC AG-GCCCTGGCGGAGGAGGTC CTA GGCCTCCTCCCCCGGGGCGCC CTTGTGGCCCTCGAG TTHA0163 160376 - 160888 + | hypothetical protein TTHA0164 161335 - 160850 - | thiol:disulfide interchange protein TTHA0165 161861 - 161379 - | hypothetical protein TTHA0166 162618 - 161869 - | hypothetical protein TERM 126 162211 - 162184 - G 77 -11.2 -4.14392 | gap 1 CTCCAAGGCGTAAAA GGCCGCCTCGCCC AGG AGGCC-GGCGGCC TCCCCCACGGCCACC TERM 127 162499 - 162483 - G 87 -3.5 -5.19328 | ACGGGATAAGAAAAA GGGCCTC CCC GCGGGCC TCCTCAATAAGCCGG TERM 128 162901 - 162916 + G 89 -6 -5.14965 | overlap 162902 AGGTGGAGGAGGTGG TGCGCC GCAA GGCGCC TTTTTTCGTGCGCCT TTHA0167 162660 - 163229 + | TetR/AcrR family transcriptional regulator TTHA0168 163226 - 163720 + | hypothetical protein TERM 129 163730 - 163762 + T 100 -24.1 -4.57341 | opp_overlap 163721, overlap 163731 AACTGAGCGCCCGCT TGCGGCCTCCCCGGC CCG GCCGGGGGGGCCGCC TTTTTCGGGGGGCTT TERM 130 163731 - 163761 + T 100 -27.6 -3.33922 | opp_overlap 163721, overlap 163730 ACTGAGCGCCCGCTT GCGGCCTCCCCGGC CCG GCCGGGGGGGCCGC CTTTTTCGGGGGGCT TERM 131 163859 - 163892 + T 79 -16.7 -3.01712 | AGGGACCTTTTGCCG GGGCCCCATGCTGGC TTGC GCCAGCATGGGGCGG TATTAGAGGAGGAGG TTHA0169 164461 - 163895 - | hypothetical protein TTHA0170 165266 - 164439 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TTHA0171 165895 - 165254 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 132 165459 - 165449 - G 81 -8.2 -4.57073 | overlap 165450 165451 GAGGGCGGTGAAAAA CCCC TGG GGGG TCTGCACCAGGCGGA TTHA0172 165910 - 166695 + | undecaprenol kinase TTHA0173 167748 - 166687 - | aminotransferase, class V TERM 133 167309 - 167283 - G 100 -18.7 -4.71426 | opp_overlap 167283 CGTCCAGGAAGAAAA GGGCCCCGGCC TCCTT GGCCAGGGCCC CGATGGCCTCCGCCG TERM 134 167547 - 167497 - G 70 -13.1 -3.28924 | CACGCGTTGGGAGAA GGCCCCGTTCACCAGGACCAGGA CCGGC CCCCGGTCCAGGTTGGCGAGGCC CGCCTCCATGCCCAG TERM 135 167803 - 167767 - H 100 -11.4 -4.56775 | gap 1, overlap 167753 167769 AGCCTCCCTCAAAAA GGCCGGGCCCCCGCGGG CACG CCC-CGGGGGCCCCTTC CCGAAGGAAGGGACC TERM 136 168645 - 168669 + G 72 -12.8 -3.53091 | overlap 168646 ACCTCGTCTACCGCC TCCGCCTGGG GCTCG CCCAGGCGGC TTTGGGGGCGCGGGT TERM 137 168646 - 168668 + G 72 -16.3 -2.71712 | overlap 168645 CCTCGTCTACCGCCT CCGCCTGGG GCTCG CCCAGGCGG CTTTGGGGGCGCGGG TTHA0174 167897 - 168949 + | alternative chaperone protein DnaJ TTHA0175 169065 - 169286 + | cold shock protein TERM 138 169303 - 169325 + F 100 -19.2 -4.62783 | opp_overlap 169296 CCATAGGACGGCCAA GGCCCTGGAC TGG GTCCAGGGCC TTTTTCACATGCCTC TTHA0176 169360 - 169833 + | acetyltransferase TERM 139 169952 - 169915 - T 73 -14 -3.17194 | opp_overlap 169919, overlap 169919 ACCCGGGCAAGGGAA GGCACGCCCCGCCCGG GGCCTT CCGGGCGGGGCGTTTA CTCTAGGCCGGCGAG TERM 140 169919 - 169948 + T 100 -24.3 -3.83026 | opp_overlap 169915 169919 GGGCAAGGGAAGGCA CGCCCCGCCCGGG GCCT TCCGGGCGGGGCG TTTACTCTAGGCCGG TERM 141 169948 - 169919 - T 100 -23.6 -2.57013 | opp_overlap 169919, overlap 169915 GGGCAAGGGAAGGCA CGCCCCGCCCGG GGCCTT CCGGGCGGGGCG TTTACTCTAGGCCGG TTHA0177 170189 - 169950 - | ferredoxin TTHA0178 170789 - 170250 - | hypothetical protein TTHA0179 171492 - 170794 - | hypothetical protein TTHA0180 177706 - 171503 - | DNA polymerase III alpha subunit TERM 142 173156 - 173116 - G 75 -15.3 -3.28712 | opp_overlap 173116, overlap 173120 GCCGCTTGCCCACAA GGTAGGGGCCCACCGTTTC GGC GAAGCGGCGGGCCGCCTCC AGCCCCCCCAGGAGG TERM 143 173379 - 173351 - G 89 -10.9 -4.57341 | opp_overlap 173377, overlap 173339 173352 AAGCCGCCCCAAAAA GCGGGCCACCTCC TCG GGAGGTAGGCCGA AGACCGCCTCGGGAA TERM 144 173378 - 173352 - G 73 -14.4 -3.33922 | opp_overlap 173377, overlap 173339 173351 AGCCGCCCCAAAAAG CGGGCCACCTCC TCG GGAGGTAGGCCG AAGACCGCCTCGGGA TERM 145 175673 - 175649 - G 75 -14.2 -3.54741 | GATCAGGTCCTCAAA GCGCCGCGGC TTGAG GCCGCGGAGC GTGGCGGTCATCCCC TERM 146 175877 - 175867 - G 71 -8.2 -4.11394 | AGTCCATCTTCAAAA GGCC CAA GGCC TCCACCGCCCCCATG TTHA0181 177761 - 178063 + | hypothetical protein TERM 147 178264 - 178274 + G 74 -4.6 -4.56597 | GGCACCTCCAGAGGC TCGG GAT CCGG TTTTTCGCCGAGCCC TTHA0182 178038 - 178484 + | hypothetical protein TTHA0183 178481 - 179044 + | 5-formyltetrahydrofolate cyclo-ligase TTHA0184 180298 - 179036 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 148 179444 - 179422 - G 71 -6.2 -4.26076 | TCACCGGGACCAAAA GGCCGTGG GGCGTGT CCACCGCC ACCCCGATGTGGATG aceE 183025 - 180308 - | pyruvate dehydrogenase subunit E1 TTHA0186 183132 - 183989 + | transcriptional regulator TTHA0187 183999 - 184934 + | putative protein phosphatase TTHA0188 184971 - 185384 + | nucleoside diphosphate kinase TERM 149 185414 - 185387 - T 82 -17 -3.02144 | GGAGCTCCTTTAACA CCCCATGCTGGC TTGC GCCCGCATGGGG GCCCCCAAAGCGCCT TERM 150 185469 - 185424 - T 100 -19.6 -3.53091 | opp_overlap 185418 185463 ATGGGGGCCCCCAAA GCGCCTCCTCCCGCCCGGGC TCGGGC GCCCCGAGGGGCGGAGGCGC TTAGGCCTCTTCCTC TTHA0189 186015 - 185470 - | hypothetical protein TTHA0190 186544 - 186188 - | dihydroneopterin aldolase TERM 151 186245 - 186232 - GR 77 -5.2 -4.57837 | overlap 186195 AGACGTCCCGAAAAA CCCC GGGGAT GGGG GCGTGGGGCTTGTGG TERM 152 186374 - 186340 - GR 87 -18.6 -2.71364 | overlap 186347 CCAGGGCCTCAATGA GGTAGAAGCGGCGGTG GCG CACCGCCTCCTCCACC AGGGCGTAGACGGCG TERM 153 186367 - 186347 - GR 73 -12.5 -3.39595 | overlap 186340 CTCAATGAGGTAGAA GCGGCGGTG GCG CACCGCCTC CTCCACCAGGGCGTA TTHA0191 187400 - 186516 - | dihydropteroate synthase TTHA0192 187399 - 188238 + | hypothetical protein TERM 154 188443 - 188479 + G 80 -12.2 -4.13654 | gap 1, overlap 188469 GGGGCCGCCCGTGAT GGGCTACCTCTCGGACC GCCT GGGCCG-GAGGAGGCCC TTTCTCCTTTGGGGG TTHA0193 188249 - 189457 + | hypothetical protein TTHA0194 189560 - 190102 + | tripartite transporter, small subunit TTHA0195 190104 - 191603 + | tripartite transporter, large subunit TERM 155 191653 - 191628 - T 100 -21.9 -4.17023 | CGAAGCACTGCAAAA GGCCCCCAGGG CAAG CCCTGGGGGCC TCGGCCTTCGCCCGG TTHA0196 192749 - 191670 - | transporter, periplasmic component TTHA0197 193295 - 192816 - | S-layer-like protein TTHA0198 193946 - 193335 - | ribonuclease HII TERM 156 193508 - 193555 + g 77 -6.9 -4.4648 | overlap 193510 193536 GCTCGTCCATGATCC GGTCC-CGGTGGACCTTGGCCAG GATG CTCGCCGCGG-CCACCGTGGGGC TTTTCTCGTCCGCCT TTHA0199 193971 - 195518 + | type B carboxylesterase TTHA0200 195523 - 197535 + | molybdopterin oxidoreductase TTHA0201 199016 - 197532 - | Mg(2+) chelatase family protein TERM 157 199147 - 199137 - g 78 -2.4 -4.77165 | overlap 199138 TGGCGTATAACAAAA TGCG CCG CGCC CTGGAGGAGCGCTTG TTHA0202 199103 - 200197 + | hypothetical protein TTHA0203 201318 - 200179 - | hypothetical protein TERM 158 200736 - 200692 - G 77 -4.2 -4.66833 | gap 2, overlap 200693 200694 GGCGAAGGCCAAAAA GGCCACCCGGAGGAGCCTCCCG TTG CGGAAGACCTCCCCGAGC--CC GTCCCCCCGCTGCCC TERM 159 200930 - 200898 - G 70 -13.3 -3.28712 | overlap 200899 GCGTGGCCGCCATAA GCCCCCCCGTGGCCC CCA GGCCCACGAGGAGGG TGGAGACCGTGGCGT TERM 160 200929 - 200899 - G 75 -16.8 -2.57132 | overlap 200898 CGTGGCCGCCATAAG CCCCCCCGTGGCCC CCA GGCCCACGAGGAGG GTGGAGACCGTGGCG TERM 161 201001 - 200964 - G 73 -16.3 -2.90075 | gap 1 TCCTGGGGAACCAGA GGCTGAAGGCCCTCATGG AGC CCATGAGGGCCG-CGGCC ATCCCCACCCCGATC TERM 162 201151 - 201135 - G 80 -11.5 -4.08216 | CCACCCGGTCCAAAA GCCCCCC CAG GGGGAGC TGGGCCGCGGCGAAG TTHA0204 202132 - 201320 - | integral membrane protein TERM 163 201946 - 201920 - G 80 -10 -4.2828 | opp_overlap 201920, overlap 201921 GGCCAGGTAGTAAAA GGCCTGGGCCCC GGA GAGGGCGAGGCC CACCCCGAGGAGCCG TTHA0205 203025 - 202129 - | hypothetical protein TERM 164 202831 - 202783 - G 75 -10.8 -3.87815 | overlap 202784 GTGGAGGGCGAGAAA CCCCCCGGCGGCCAAGGCGAAG GGCAG CCCCGCCCTGCCCTCCAAGGGC CGCGTCCAGCCGGGG TERM 165 203010 - 203024 + g 75 -5.6 -4.56597 | overlap 203011 TCTTCCACCCCGGGG GGCGCA TGG TGCGCA TTTTTACACAAGGGA TERM 166 203107 - 203082 - H 70 -5.9 -4.2803 | opp_overlap 203081 203098 TAGCCCAAGGGAAAA CCCGGGGACGG ACGC CCCACCCCGCG CTGGTATACTTCCCC TTHA0206 203137 - 204264 + | nicotinamide nucleotide transhydrogenase, alpha subunit 1 TTHA0207 204264 - 204566 + | nicotinamide nucleotide transhydrogenase, alpha subunit 2 TTHA0208 204566 - 205918 + | nicotinamide nucleotide transhydrogenase, beta subunit TERM 167 206030 - 206019 - f 70 -3.6 -4.56597 | overlap 205995 205994 206020 TTCGGGCCTTAAAAA GCCC GCCG AGGC GCTTGAGGGGGAGCG rplJ 206107 - 206628 + | 50S ribosomal protein L10 rplL 206642 - 207019 + | 50S ribosomal protein L7/L12 TERM 168 207040 - 207061 + T 100 -14.4 -4.54727 | GCCCTGCGGGGTGCC CCCGGGCC ATGTGG GGCCCGGG TTTTCCTTTAGCGCA TTHA0211 208184 - 207069 - | lipoprotein releasing system transmembrane protein TERM 169 207471 - 207461 - G 70 -4.6 -4.44797 | TGAGGAAGATCAAAA GGCC GAG GACC TGCCGCTGCAGGGAA TERM 170 208143 - 208088 - G 74 -7.9 -4.27192 | opp_overlap 208102 208103, overlap 208089 AAAGGGCCACCAAAA GCACCCCCACCCCCACGCCCACGCC CAAGAC GGCGAGGGCGCTTTGAAGGGGGCGG CGCCAGATGTGGGCC TTHA0212 208637 - 208206 - | hypothetical protein TERM 171 208772 - 208745 - R 100 -14.8 -4.81249 | opp_overlap 208744 208743 TTGCAAACTCAAAAA GCCGCAGCGCAC GGGA ACGCGCCGCGGC AGGTTTTCTTACAAG TTHA0213 209621 - 208824 - | hypothetical protein TERM 172 209052 - 209038 - G 72 -3.4 -4.52589 | overlap 209042 CCCGCGTAGACAAAA CGCAGG TAG CCCCCG GCCCCGGAAACGTCG TERM 173 209489 - 209453 - G 72 -12.1 -3.61398 | overlap 209414 CCTGGTCGGGAAGAA GGCGGAAGACGGCCACC CCC GGGCGCAGGCTTCCGCC GGAGGCCCCCTGGGC TTHA0214 211319 - 209751 - | kinase TERM 174 210999 - 211015 + g 77 -5 -4.74103 | overlap 210984 GGCCCGGCGGAGGAG GGACCC GTCCA GGGCCC TTTTTCCCTTCAAGG TTHA0215 211653 - 211312 - | alkaline shock protein TTHA0216 212765 - 211656 - | alanine dehydrogenase TERM 175 212070 - 212091 + g 80 -3 -4.87626 | gap 1, overlap 212077 GACGGCCCCGATGAG GAG-GTCCG CGTGC TGGACGCTC TTTTTGATGTTGGCC TTHA0217 213706 - 212768 - | tRNA pseudouridine 55 synthase TTHA0218 213747 - 214541 + | enoyl-CoA hydratase TTHA0219 214538 - 215245 + | ribosomal large subunit pseudouridine synthase B TTHA0220 215242 - 215787 + | hypoxanthine-guanine phosphoribosyltransferase TTHA0221 215784 - 216452 + | hypothetical protein TTHA0222 216549 - 217775 + | adenylosuccinate synthetase TTHA0223 218571 - 217780 - | hypothetical protein TTHA0224 218605 - 219651 + | glucose-1-phosphate thymidylyltransferase TTHA0225 219655 - 220539 + | biotin operon repressor/biotin-[acetyl-CoA-carboxylase] synthetase TTHA0226 220638 - 221063 + | hypothetical protein TTHA0227 221406 - 221014 - | hypothetical protein TTHA0228 221816 - 221403 - | hypothetical protein TERM 176 221532 - 221513 - G 79 -13.6 -3.70902 | GGGGGGAGAGGGAAA GGAGGAGG TCGG CCTCCTCC CGCACCGCCTCCGGG TERM 177 221679 - 221696 + g 72 -12.7 -3.53012 | opp_overlap 221633 GTGGCCCTCCGCCTT GGGGAGG AGCT CCTCCCC TTTCCGGACGAAGAC TTHA0229 221947 - 223050 + | 2-oxoisovalerate dehydrogenase, E1 component alpha subunit TTHA0230 223060 - 224034 + | 2-oxoisovalerate dehydrogenase, E1 component beta subunit TTHA0231 224037 - 224240 + | 2-oxoisovalerate dehydrogenase, E1 component beta subunit TERM 178 224915 - 224876 - g 79 -7.7 -4.56597 | gap 1, overlap 224897 GGTGGCGGTGAAAAA CCCCTTCCTCTCC-GGGG AAAAG CCCCAGGAGGGGGCGAGG CCGGGGCGGGTCCTC TERM 179 224911 - 224897 - g 71 -8.5 -4.07568 | overlap 224876 CCTCTCCGGGGAAAA GCCCC AGGAG GGGGC GAGGCCGGGGCGGGT TERM 180 225082 - 225053 - g 70 -14.3 -3.16564 | gap 1, opp_overlap 225080, overlap 225067 CGCCGAGCGGAGGAA GGCCCCTCC-CGAA AGG CCCGAGGAGGGGCC CCAGGTGCTTCCTGC TTHA0232 224493 - 225848 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TTHA0233 225850 - 227244 + | pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component TERM 181 227433 - 227412 - T 73 -14.4 -3.21416 | opp_overlap 227407, overlap 227397 GAGGGCCACCACCAA GGCGGGCC CCGCAT GGCCCGCC CTTAGACCTTTTTCC TTHA0234 228697 - 227477 - | transposase TTHA0235 229426 - 228776 - | hypothetical protein TTHA0236 230754 - 229423 - | hypothetical protein TTHA0237 231691 - 230822 - | 3-hydroxyisobutyrate dehydrogenase TTHA0238 232060 - 231701 - | hypothetical protein TTHA0239 233028 - 232057 - | lipoyl synthase TTHA0240 233671 - 233018 - | lipoate-protein ligase B TERM 182 233781 - 233812 + r 89 -17.2 -3.53012 | opp_overlap 233799 233800, overlap 233783 GCTAGCCCTTTTGGG GCCCCCGCCGAGGC CAAA GCCTCGGCGGGGTA TTTAGCCGAGGAACC TERM 183 233783 - 233810 + r 100 -24.2 -3.34398 | opp_overlap 233799 233800, overlap 233781 TAGCCCTTTTGGGGC CCCCGCCGAGGC CAAA GCCTCGGCGGGG TATTTAGCCGAGGAA TTHA0241 234638 - 233814 - | short chain dehydrogenase/reductase family oxidoreductase TERM 184 233881 - 233925 + g 75 -12.8 -3.71649 | gap 2, overlap 233882 233917 CTGAGGAGGAGGGTT TCCC-GGGCCCG-GGCCGGGTG GGC CACCAGGTAGCGGGCCCTGGGG TTTGGGCTTTCCAGG TERM 185 234324 - 234303 - G 91 -12.3 -4.60487 | GAGGAGGGGTAAAAA GGCCTTCAC CGTG GCGAAGGCC CCGAGGACGTTCACC TERM 186 234507 - 234488 - G 75 -15 -3.39327 | GGGTCACATCCAGAA GGAGGGGG ACCA CCCCCTCC TGGGCCAAGCGCGCC TERM 187 234722 - 234697 - R 100 -19.7 -3.50853 | opp_overlap 234685 CCTCGCCAAGGACAA CCCCCCGCCCC AAGG GGGGCGGGGAG GGGCCTAAGGGGTTT rplI 235188 - 234742 - | 50S ribosomal protein L9 rpsR 235465 - 235199 - | 30S ribosomal protein S18 TERM 188 235339 - 235294 - G 72 -12.5 -3.53012 | gap 1, overlap 235295 GCTCCTTGGCGGAAA GCCCCGTGCGGCGGCGGGGAAG GAT CTTCCCCGTCTCCG-ACAGGAA CCGCTTGAGCACCTC TERM 189 235338 - 235295 - G 72 -16 -2.71712 | gap 1, overlap 235294 CTCCTTGGCGGAAAG CCCCGTGCGGCGGCGGGGAAG GAT CTTCCCCGTCTCCG-ACAGGA ACCGCTTGAGCACCT TTHA0244 236253 - 235462 - | single-stranded DNA binding protein rpsF 236568 - 236263 - | 30S ribosomal protein S6 TERM 190 236659 - 236640 - R 100 -7.8 -5.75342 | opp_overlap 236646, overlap 236643 236644 CCCCCGGAAAAAAAA GACCCAGG GGGG CCTAGGCC CCCCTTTCTGGCTCC TERM 191 236646 - 236663 + r 84 -14.1 -3.91897 | opp_overlap 236640 236644 236643 GAAAAAAAAGACCCA GGGGGGC CTAG GCCCCCC TTTCTGGCTCCGCGG rplA 237525 - 236836 - | 50S ribosomal protein L1 rplK 237961 - 237518 - | 50S ribosomal protein L11 TTHA0248 238559 - 238005 - | transcription antitermination protein NusG TERM 192 238397 - 238362 - G 76 -15.6 -3.15544 | gap 1, opp_overlap 238361 238362 238364 GTCCATCTGGATGAA GAGGTAGCCCGGGAAGA GCT TCTTCC-GGACCACCTC CTTCTTGCCCCCCTC secE 238738 - 238556 - | preprotein translocase subunit SecE rpmG 238902 - 238738 - | 50S ribosomal protein L33 TERM 193 238867 - 238878 + g 72 -5.8 -4.3739 | CTTGCACTCCGTGCA CTCC AAGA GGAG TTTTATCCGGACCTC TERM 194 238916 - 238941 + r 100 -20.5 -3.20723 | overlap 238940 ATCTCGGCACCTCGG GAGGGGGGAGG CTAG CCTCCCCCCTC TTGGCTTACTCCAGG TTHA0251 240167 - 238947 - | elongation factor Tu TERM 195 240246 - 240225 - H 95 -4.3 -5.47218 | overlap 240227 GGGCAGTCAAAAAAA TGGAGCTCG CGGC CGGGCTCGA ACCGGCGACCTCACC TERM 196 241293 - 241281 - g 90 -9.1 -5.02476 | AGATCCTGGAAAAAA CCCTG AGC CAGGG CGGGAAGGTCCTCAT TTHA0252 240650 - 241945 + | metallo-beta-lactamase superfamily protein TTHA0253 242204 - 241947 - | hypothetical protein TTHA0254 242485 - 242201 - | hypothetical protein TTHA0255 242597 - 243040 + | ferric uptake regulation protein TERM 197 243048 - 243083 + TF 81 -11 -4.0825 | gap 1, overlap 243049 AGAGGTAGCCGCCTA AGCCTGAGGCCCGGGGG GGT TCCCCGGGCC-CGCGCC TTCTTTCCTTCCCCG TERM 198 243049 - 243082 + TF 74 -14.5 -3.04468 | gap 1, overlap 243048 GAGGTAGCCGCCTAA GCCTGAGGCCCGGGGG GGT TCCCCGGGCC-CGCGC CTTCTTTCCTTCCCC TTHA0256 244703 - 243126 - | leucine aminopeptidase TERM 199 243739 - 243701 - Gf 78 -10.2 -4.14392 | CGGGAAGGCCCAAAA GGGCCGCGGCCTTG AAGGCCCCGAG CACGGCCGCCGCCC CCGCCATGTCGCTCT TERM 200 244111 - 244141 + gF 72 -5.4 -4.4261 | overlap 244110 244118 GCCTCGGAAACGCCC GGAAGGAGGAGG GTGAGGG CCTTTTCCTCCC TTTTCGTCTTGAGCC TERM 201 244893 - 244912 + GH 71 -6.3 -4.25104 | overlap 244894 CCTTTTCATCGTCTT CCCCGGC TTTCTC GCCGGGC TTTTCGTGGACGCCG TTHA0257 244543 - 245433 + | hypothetical protein TTHA0258 245430 - 246533 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 202 247227 - 247205 - g 73 -11.2 -3.83154 | overlap 247199 247206 CAAGGACAAGGTAAA GGCCGTGGCC ATT GACCACGGCA AGGGGTGCGTCCTGC TERM 203 247226 - 247206 - g 70 -14.7 -2.89169 | overlap 247199 247205 AAGGACAAGGTAAAG GCCGTGGCC ATT GACCACGGC AAGGGGTGCGTCCTG TTHA0259 246570 - 247538 + | phosphate ABC transporter, periplasmid phosphate-biniding protein TTHA0260 247596 - 248498 + | phosphate ABC transporter permease TTHA0261 248830 - 249705 + | phosphate ABC transporter permease TTHA0262 249699 - 250514 + | phosphate ABC transporter ATP-binding protein TERM 204 250796 - 250823 + G 87 -8.3 -4.78107 | overlap 250798 CGCCCTCCTGGGGGA GCGGGGCCTCG TGCCCC CGGGGCTCCTC TTTTTCCTGCTCCTC TERM 205 250798 - 250821 + G 73 -9.5 -4.00443 | overlap 250796 CCCTCCTGGGGGAGC GGGGCCTCG TGCCCC CGGGGCTCC TCTTTTTCCTGCTCC TTHA0263 250524 - 251696 + | multidrug-efflux transporter TTHA0264 251698 - 252729 + | RecF protein TTHA0265 252687 - 253472 + | hypothetical protein TERM 206 253685 - 253697 + G 71 -6.9 -4.18018 | opp_overlap 253669, overlap 253676 253675 CCACGTGGTGGCCCC GGGGG ACA CCCTC TTTTCCCTGGCGCGC TTHA0266 253473 - 254249 + | cell wall-binding endopeptidase-related protein TTHA0267 255123 - 254203 - | oxygen-insensitive NADPH nitroreductase TTHA0268 255640 - 255137 - | hypothetical protein TTHA0269 256745 - 255678 - | type IV prepilin peptidase (PilD) TERM 207 255764 - 255732 - G 81 -13.3 -3.9461 | CTCCCCGAAGAAGAA GGCCACCACCCCCCC GAG GGCGAGGTAGGGGCC GAAGGGGAGCTTCCT TERM 208 256514 - 256499 - G 76 -8.2 -4.30576 | overlap 256500 TTGCGAGGAGGAAAA GCCCCC CCGT GAGGGC CTCCACCAGGGGGTA TERM 209 256945 - 256925 - g 77 -6.7 -4.60487 | overlap 256926 CATGATCCCCAAAAA GGGGCACGA GCA CCGCGCCCG GCAGATGGCCGCCCT TTHA0270 256812 - 258344 + | carboxypeptidase TERM 210 258393 - 258367 - T 100 -25.2 -3.91897 | CCCGGCACTTAGAAA GGGGCCGGGCCT TGA AGGCCCGGCCCC TTAGCCGCTAGGGCT groEL 260039 - 258408 - | chaperonin GroEL groES 260357 - 260052 - | co-chaperonin GroES TTHA0273 261143 - 260454 - | hypothetical protein TTHA0274 261386 - 261484 + | hypothetical protein TTHA0275 262275 - 261493 - | RNA 2'-O ribose methyltransferase TTHA0276 264385 - 262265 - | acyl-CoA synthetase TERM 211 262565 - 262528 - G 77 -11.1 -4.08216 | overlap 262513 262549 GGACGGGCCCGAAAA GGGGGTGGGGCTCGGCC AAAA GGCGGAGCCTAAGCCCC TCCTCCTCGCCCAGG TERM 212 264376 - 264401 + g 74 -4.6 -4.56597 | opp_overlap 264380 GGGAAAGGCGCCTCA GGAACTCCAC GAAAAG GGGGAGGTCC TTTTTGGAGGCCCGG TTHA0277 264753 - 266000 + | glucose-6-phosphate isomerase TTHA0278 266089 - 267678 + | phosphoenolpyruvate carboxykinase TERM 213 268451 - 268479 + G 71 -14.5 -3.01712 | CCTTACGGTGAGCGA GGAGGCCCTCCTC GAG GCGGAGCGCCTCC TCTTCACCCGCACCA TTHA0279 267678 - 268613 + | putative threonine dehydratase TTHA0280 269831 - 268656 - | carbamoyl phosphate synthase small subunit TERM 214 268892 - 268908 + g 73 -13.7 -3.38272 | opp_overlap 268889 TGAGGGAGTCAATGT CCACGGC GTA GCCGTGG TTCTGGCTGGTGATC TERM 215 269602 - 269586 - G 70 -9.4 -3.85698 | CTCCTTGGCCACAAA GCCCCT CACCC AGGGGC GGTTGGACTGCATGT TTHA0281 270282 - 270019 - | hypothetical protein TTHA0282 270817 - 270284 - | acetyltransferase TTHA0283 272207 - 270819 - | argininosuccinate lyase TERM 216 271609 - 271621 + g 75 -10.5 -3.90291 | overlap 271593 CCCGCGAGGGCCGCC GCCCC CAG GGGGC TTTCGTTGAGGCGCT TTHA0284 273399 - 272197 - | argininosuccinate synthase TERM 217 274139 - 274126 - g 75 -5.2 -4.59773 | CTCGAGGCCCAAAAA CCCG GGATGG CGGG GAGCCTCGTGGAGGG TTHA0285 273598 - 275592 + | hypothetical protein TERM 218 277504 - 277488 - g 74 -7.9 -4.25104 | CCTCCTGGACGAAAA CGGGCAG GTC CTGGCCG AAAACGACGACATCA TTHA0286 275602 - 277671 + | serine protease TERM 219 277713 - 277684 - T 95 -20.7 -2.71681 | opp_overlap 277681 277682, overlap 277672 TAAGGTCCGTAAGCA CCCACCCCCCGGG CTTC CCCGGGGGGTGGT CAAGTTTCGCCTACA TTHA0287 279091 - 277724 - | 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) TERM 220 278776 - 278789 + g 70 -2.3 -4.56597 | overlap 278759 CCGTGCCCTGGTGGC GGGCG ATGC CGTTC TTTTTGAAGAGGAAC TTHA0288 280313 - 279093 - | 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) kgd 283014 - 280324 - | alpha-ketoglutarate decarboxylase TERM 221 283079 - 283058 - H 81 -5.7 -4.82154 | overlap 283049 283060 AAGCTACACCAAAAA GCGGTGTGG TGCG CCACGCCCC GTACAATGGGGGCAT TTHA0290 283093 - 283857 + | enoyl-CoA hydratase TTHA0291 283854 - 284429 + | Holliday junction DNA helicase RuvA TTHA0292 285161 - 284412 - | hydrolase TERM 222 284958 - 284908 - G 85 -16.7 -3.53091 | gap 1, opp_overlap 284923, overlap 284894 ACCCGCTCCCGGAAA GGCCCGGCCCAGGCGGCCAGGGCC TCGA GGCCCGGGGTGC-TGTACCGGGCC CACAGGGCCTCCAGG TTHA0293 285526 - 285158 - | hypothetical protein TERM 223 285461 - 285421 - G 73 -9.5 -3.91716 | overlap 285418 CGAGGGGGGAAAGAA GGGCCTCCCGCTCGGGGAG GAG CTCCTCCAGGGCGAGCCCC AGGGCCTGGTAGAAG TTHA0294 286038 - 285523 - | hypothetical protein TTHA0295 286473 - 286039 - | universal stress protein UspA-like protein TTHA0296 286526 - 287242 + | RNA methyltransferase TTHA0297 287247 - 288317 + | acetylornithine deacetylase (ArgE) TERM 224 288493 - 288515 + G 71 -9 -4.07568 | GTACGTGCCCGAGGA GGTCCTGGGC GAG GCCGAGGCCC TTTTGCGGGAGGACG TTHA0298 288302 - 288538 + | hypothetical protein TTHA0299 288535 - 289443 + | glucokinase TTHA0301 289810 - 289562 - | hypothetical protein TTHA0300 289430 - 289642 + | hypothetical protein TTHA0302 290132 - 290341 + | hypothetical protein TTHA0303 290829 - 290320 - | hypothetical protein TERM 225 290767 - 290785 + g 81 -16 -3.56092 | opp_overlap 290751 GGCGAGGAGGGCCTT GCGGCTCG CCT CGAGCCGC TTTAGGGCCTCGTCC TTHA0304 290981 - 291766 + | enoyl-[acyl carrier protein] reductase ispG 291802 - 293022 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 226 293072 - 293114 + G 76 -16.2 -3.15544 | overlap 293045 GGGCAGGGCCCGGGT GGGGAGGCTCTTCACCCCCC ACG GGGCGGTGGAGACCCCCCTC TTCATGCCCGTGGGC TERM 227 293911 - 293888 - g 79 -5.2 -4.66833 | gap 1, overlap 293890 293908 GCTCAACCTGAAAAA CGCCCG-CTTC CTC GAGGACAGGCG CCCCCTGGAGGAGGG TTHA0306 293022 - 294179 + | queuine tRNA ribosyltransferase TERM 228 294215 - 294182 - f 74 -14.5 -3.04144 | overlap 294185 GGGCCACGGGTAACA CCACCCCATGCCGGC CTGC GCCGGCATGGGGCCC CGGCAAAAGGCGCCT TERM 229 294212 - 294185 - f 100 -22.8 -2.74523 | overlap 294182 CCACGGGTAACACCA CCCCATGCCGGC CTGC GCCGGCATGGGG CCCCGGCAAAAGGCG TERM 230 294376 - 294393 + G 71 -9.1 -4.12188 | TGGCCCTCTTCACCG CCGGGGT GGGC ACCCTGG TTTTCCACCTGGTCA TERM 231 294442 - 294485 + G 90 -10.2 -4.86731 | gap 1, overlap 294444 294445 TCTTCCTGGGCTCCA GCTTCGCCTTCATCGCCCCCA TCC TGGCGGCCAAGGAGGCGG-GC TTTTCTTTGAGCGCC TTHA0307 294264 - 294677 + | uracil permease [N-terminal] TERM 232 295100 - 295073 - g 71 -8.4 -4.11692 | opp_overlap 295096 295097 CACCTACTCCGAAAA CACCGGGGTC CTGGCGGT GACCCGGGTG TACGACCCCTTGGTC TTHA0308 294699 - 295499 + | uracil permease [C-terminal] TERM 233 295614 - 295589 - T 82 -11.9 -4.1523 | gap 1, overlap 295590 295605 GGGAAGGAGAAAGAA CGGGAGGACCCT AAA AGGG-CCTCCCA CGTTGCGAAACCCAC TERM 234 295613 - 295590 - T 72 -13.2 -3.08415 | gap 1, overlap 295589 295605 GGAAGGAGAAAGAAC GGGAGGACCCT AAA AGGG-CCTCCC ACGTTGCGAAACCCA TTHA0309 296737 - 295640 - | hypothetical protein TERM 235 295888 - 295864 - G 70 -4.9 -4.32034 | CCACCATGACCAAAA GGGCCAAGG CCGCCTT CCCCAGCCC CCCGGTGGCGGCGAG TERM 236 295993 - 295973 - G 72 -3.8 -4.57073 | overlap 295974 GACCCCGGCCAAAAA CCCCAGGC TCGCC GCGAGGGG CACCCCCACGAGCCA TERM 237 296265 - 296243 - G 85 -9 -4.62783 | GAGGGAGGTGAAAAA CCCGAGGAGG CTT CCCCCCTGGG CCAGAAGCCCCTGGA TERM 238 296350 - 296306 - G 82 -14.4 -3.86015 | gap 2 GAGGGCCTCCAGAAA GCCCTGGAGGAG-GC-CCCGGA GGT TCCGGGTGAGCTCCTCCAGAAC GGGCCTCAGGCTTTC TERM 239 296647 - 296629 - G 72 -11.6 -3.69323 | TGAGGAGCACGGAAA GGGCGGGC CAG GCCCGCGC CACCAAAAGGAAGAG TTHA0310 296888 - 298714 + | cytochrome c oxidase assembly factor (CtaA) + protoheme IX farnesyltransferase (CtaB) TTHA0311 298729 - 299742 + | cytochrome caa3 oxidase subunit IIC TTHA0312 299755 - 302130 + | cytochrome caa3 oxidase subunit I (polypeptide I + III) TERM 240 302177 - 302138 - f 80 -14.2 -3.67597 | opp_overlap 302147, overlap 302147 TCTGGTAGTCAAGAA GGCCGCAAAGCCCCCCGC TTAG GCGGGGGGCTTTGCTATG AAAAGGGAAGGGATG TERM 241 302168 - 302147 - f 95 -18.7 -3.59247 | opp_overlap 302147, overlap 302138 CAAGAAGGCCGCAAA GCCCCCCGC TTAG GCGGGGGGC TTTGCTATGAAAAGG TERM 242 302147 - 302168 + F 100 -18.7 -3.83026 | opp_overlap 302147 302138 CAAGAAGGCCGCAAA GCCCCCCGC TTAG GCGGGGGGC TTTGCTATGAAAAGG TTHA0313 302175 - 302894 + | hypothetical protein TERM 243 303180 - 303202 + TF 100 -22 -4.41348 | overlap 303167 GCCGCCCACCAGGCG GGGCGGGCCC TTT GGGCCCGCCC TTTCTTTCCCCGCCC TTHA0314 304537 - 303317 - | hypothetical protein TERM 244 304249 - 304231 - Gf 74 -4.4 -4.51777 | overlap 304219 304232 304233 AGACGAGAAGCAAAA GCCCCGCG AAG CGGAAGGC CGAGGCCCTGCGGTA TERM 245 304328 - 304309 - Gf 89 -10.7 -4.26903 | CCCACCCCACCAAAA GGGCCTG AGGGAG CAGGCCC CCCGCCAGGGGAAGG TERM 246 304784 - 304817 + GrH 74 -12.4 -3.53224 | gap 2 CTTGGCCCAGTACCC GGCGGCCCGGC-C-CC ACCT GGAGCGCCTGGCCGCC TTTGACCGGGACCTC TERM 247 305080 - 305109 + GrH 78 -9.9 -4.07687 | gap 1, opp_overlap 305064, overlap 305101 GCCCCCCGCCCCACC GGCCCACGGAGGCG GAG CGCGTCCG-GGCCC TTTTGGACCGGGCCT TTHA0315 304494 - 305459 + | hypothetical protein TERM 248 305894 - 305878 - gTR 71 -6.5 -4.1899 | CGAGGCCACGGAAAA GGCCCTG CGC CAAGACC TGGACTACCTCCGAA TTHA0317 306622 - 305918 - | hypothetical protein TTHA0316 305528 - 305971 + | hypothetical protein TTHA0318 307857 - 306631 - | hypothetical protein TTHA0319 308659 - 307838 - | hypothetical protein TERM 249 308090 - 308057 - G 71 -8.2 -4.07568 | gap 2 CGCGGCCTCGGAAAA GACGTAGCGCCGGACC TCGG GGTCCAG-GCC-CGTC CGGGGCCTGAGGGCC TERM 250 308253 - 308228 - G 75 -5.3 -4.56597 | gap 1, opp_overlap 308230, overlap 308229 308230 CTCCTCGCCCAAAAA GCGGGC-CAGGG CCT CCTTGAGCCCTC GAGGCGAGAGCTCCG TERM 251 308633 - 308604 - G 78 -9.2 -4.37092 | gap 1, opp_overlap 308604, overlap 308585 AGGTCCTCCAGAAAA CCCCGGGCCGTGG TCTTG CC-CGCCCCGGAG AGGCCCGTGAGGACG TTHA0320 309585 - 308668 - | methionyl-tRNA formyltransferase TERM 252 308725 - 308741 + g 71 -15.1 -3.06183 | opp_overlap 308673 CCGGGCCCAGTCGGC GGCGGGC ATG GCCCGCC TTCCCTCGGGCTGGA TERM 253 309424 - 309414 - G 71 -8.2 -4.07885 | GAGCCGGGCGCAAAA GGGG AAG CCCC TCCGCCTCGGCGTAG TERM 254 309443 - 309484 + g 79 -15.7 -3.31144 | gap 1 GCCTCGGCGTAGCGG GCCACGGGGCTCGGGGCGGG CCT CAGGCCCCG-GCCCTGGGGC TTGTCGGGCTGGGAG TTHA0321 310160 - 309582 - | polypeptide deformylase TTHA0322 310975 - 310166 - | hypothetical protein TTHA0323 311693 - 310968 - | hypothetical protein TERM 255 311595 - 311585 - G 70 -4.6 -4.3586 | overlap 311586 CGAGGTAGATCAAAA CGCC GCG GACG AGGTTCAGGGCCCGG TTHA0324 312842 - 311697 - | phosphopentomutase TTHA0325 313096 - 312839 - | hypothetical protein TTHA0326 314176 - 313106 - | putative ATP/GTP-binding integral membrane protein TERM 256 314149 - 314123 - G 90 -7.1 -5.0916 | overlap 314124 CCTGCAACACAAAAA GGGGCCGCACG CGGGT CGCGCGGCACG GGGCGCCCGAAACAA TTHA0327 315082 - 314192 - | 5,10-methylenetetrahydrofolate reductase TERM 257 314219 - 314253 + g 74 -2 -4.65078 | gap 1, opp_overlap 314167 CGAGGCGGGGCGGAG GCCCAGGCGCTC-CA GGACCA TGCGGGTGGCGGGGC TTTTGTTCAGGGTGT TERM 258 315053 - 315043 - G 85 -8.2 -4.62168 | overlap 314992 315044 ACTCAAAGGAGAAAA GCGG GCC CCGC CGCGCCTTGAGGAGG TERM 259 315662 - 315718 + G 79 -16.5 -3.41807 | overlap 315660 315678 315705 315706 CCTTTGACCTGGAGG CCACCTTGCGCCAGGTGACCTTCCTCT ACC AGGGCAAGGTCACCCGGGCCGAGGGGG TTCGGTTTGTTTGAG TERM 260 315705 - 315723 + G 72 -5.9 -4.41348 | overlap 315662 315678 315706 CCAGGGCAAGGTCAC CCGGGCC GAGGG GGTTCGG TTTGTTTGAGCACCC TTHA0328 315142 - 315732 + | isochorismatase TTHA0329 315725 - 316282 + | DNA-3-methyladenine glycosidase TERM 261 316339 - 316287 - g 84 -19.2 -2.90496 | overlap 316284 CCTCCCCCTAAAGGA GGCCCC-GGCCTCGGGCGAGGTGG CCCTCCT CCGCCTC-CTCGAGGCCCGGGGCC AGGAGGTGGTCCCCA TTHA0330 316258 - 316854 + | hypothetical protein TERM 262 317441 - 317418 - g 75 -16 -3.05844 | TCCTGGACGTGAACA CCGCCGGCCT GAGG AGGCCGGCGA AGGAGGTCTACCCCG TERM 263 317523 - 317576 + G 79 -18.1 -2.74605 | gap 1, overlap 317521 317557 GCTCCGACGCCCACC GCCCGGAGGAGGTGGGCTTCGCCTTC CCC GAGGTCCAAGCCCTCCTCG-CCGGGC TCGGTTTTCGGGAAG TTHA0331 316844 - 317647 + | histidinol-phosphatase TTHA0332 317889 - 317623 - | hypothetical protein TTHA0333 318574 - 317912 - | hypothetical protein TTHA0334 318937 - 318605 - | hypothetical protein TERM 264 318850 - 318800 - G 73 -14.5 -3.2048 | overlap 318826 CCCAAAGCCCATGAA GCCCTTGAGGACCGTGGCCCCGG AAAGG CCGCGGCGCCGGGCCTCGAGGAC GATGGCCTCGTAAAG TTHA0335 319319 - 318942 - | hypothetical protein TERM 265 319252 - 319208 - G 80 -9.9 -4.25104 | overlap 319209 319251 GGGCGTTGACGAAAA GCGTGCTCCAGGGAAACCCCG CCC CCAGGCTTCCCTGGACCAAGG CCCCGAGGCCGTAGC TTHA0336 319340 - 319813 + | riboflavin synthase, beta subunit (6,7-dimethyl-8-ribityllumazine synthase (RibH)) TTHA0337 320204 - 319800 - | hypothetical protein TTHA0338 321060 - 320293 - | hypothetical protein TTHA0339 322499 - 321060 - | hypothetical protein TERM 266 321321 - 321300 - G 72 -3.5 -4.57073 | TAGGCCCCGGAAAAA GGGTTCCGC CAGG GCGAGCCCC AGGAAGGTGAGGAGG TERM 267 321883 - 321831 - G 70 -4.6 -4.3208 | overlap 321833 321873 CCCCAGAACGGAAAA CCCCCCCTGCC-CGTCCAGCCGCCCG AAG CGGGCGAG-GACCAAGGCGGCGAGGG CCTCCCGGTAGAGGG TERM 268 323214 - 323158 - g 75 -12.7 -3.62518 | overlap 323150 323135 323159 323204 323209 GGAAACAGCTGGAAA CCGCCCTCGCCCTCCCGGCCCGCACCG CCG CGGACCGGTACGAGAAGGAAAGGGCGC AGAAGGCCCTCGCCG TERM 269 323213 - 323159 - g 72 -16.2 -2.77029 | overlap 323150 323135 323158 323204 323209 GAAACAGCTGGAAAC CGCCCTCGCCCTCCCGGCCCGCACCG CCG CGGACCGGTACGAGAAGGAAAGGGCG CAGAAGGCCCTCGCC TTHA0340 322548 - 323240 + | hypothetical protein TTHA0341 323247 - 323741 + | molybdopterin biosynthesis enzyme, MoaB TERM 270 323746 - 323758 + G 81 -2.6 -4.93296 | overlap 323741 ACCATGAGTAGGGTG CCGG AGCCC TCGG TTTTTCTGGTGGTGG TTHA0342 323734 - 324864 + | N-succinyldiaminopimelate aminotransferase TTHA0343 326118 - 324874 - | folyl-polyglutamate synthetase TERM 271 325540 - 325501 - G 100 -24.4 -3.37796 | opp_overlap 325485, overlap 325502 325536 CCCCAGGACCCACAA GGGGGTCTTGCGGGCCAA GGCC TCGGCCCGCAAGACCCCA AGCCCCTCCCCCCGG TERM 272 325539 - 325502 - G 100 -27.9 -2.62463 | opp_overlap 325485, overlap 325501 325536 CCCAGGACCCACAAG GGGGTCTTGCGGGCCAA GGCC TCGGCCCGCAAGACCCC AAGCCCCTCCCCCCG TTHA0344 326514 - 326119 - | ferric uptake regulatory protein TTHA0345 327462 - 326557 - | porphobilinogen deaminase TERM 273 327501 - 327482 - R 100 -16.4 -4.50976 | opp_overlap 327493 327498 CCCCATACTACAAAA GCCCCGGC GAAG GCCGGGGC CCTGCCCTTTCTGCG TTHA0346 327969 - 327520 - | peptidyl-prolyl cis-trans isomerase TERM 274 327872 - 327815 - G 75 -13.9 -3.53091 | overlap 327816 ACGTGGGCCTGGAAA GCCTCCCCCTCCTCCCGGCCCTCCAGG GCCT CCTCGAGGCCCGGGATGAGGTTGCGGT GGCCGTGGAGGTAGG TERM 275 327871 - 327816 - G 76 -17.4 -2.71712 | overlap 327815 CGTGGGCCTGGAAAG CCTCCCCCTCCTCCCGGCCCTCCAGG GCCT CCTCGAGGCCCGGGATGAGGTTGCGG TGGCCGTGGAGGTAG TERM 276 328525 - 328509 - g 76 -3.5 -4.63527 | GGACCAGTTCAAAAA CCCCGCC AAC GTCCGGG CCCACTACGAGACCA TTHA0347 328078 - 328992 + | O-acetylserine (thiol)-lyase (cysteine synthase) TTHA0348 329005 - 329352 + | hypothetical protein TTHA0349 329780 - 329349 - | CBS domain-containing protein TTHA0350 330630 - 329824 - | hypothetical protein TTHA0351 331763 - 330627 - | efflux protein (fosmidomycin resistance) TERM 277 331229 - 331190 - G 75 -16.4 -3.01712 | gap 1, overlap 331167 331200 CGTCCCCCCGGAAGA CGCGCAGGAAGTCCCG-GA AGC CCGCGGGCCTCCCCGCGCG GCGCACCGGGGGCAG TERM 278 333683 - 333655 - g 76 -8.7 -4.19704 | overlap 333656 GAAGCGGAGCGAAAA GGCCCAGGCCCTG ATC CAGGCCCTGCGCG AGGAGGCGAAAATCG TTHA0352 331985 - 333811 + | peptidyl-prolyl cis-trans isomerase TERM 279 333852 - 333831 - f 75 -12.9 -3.48276 | opp_overlap 333832, overlap 333832 GGGGCCCGGAGAGAA GGGGCGGGG GCTT CCCCGCCCT TTTACAATGGCCCCA TERM 280 333851 - 333832 - f 77 -16.4 -2.68823 | opp_overlap 333832, overlap 333831 GGGCCCGGAGAGAAG GGGCGGGG GCTT CCCCGCCC TTTTACAATGGCCCC TERM 281 333832 - 333851 + F 95 -16.4 -4.13767 | opp_overlap 333832 333831 GGGCCCGGAGAGAAG GGGCGGGG GCTT CCCCGCCC TTTTACAATGGCCCC TERM 282 333935 - 333923 - g 71 -9.1 -4.13014 | CCCAGACCCCCAAAA CCCCT TGG AGGGG GTCCGCTTCGGCACG TERM 283 334306 - 334292 - g 72 -12.8 -3.50853 | overlap 334262 CGGCTTCAAGTACAA CCCCCC CAC GGGGGG TCCGGCGAACGCCCG TTHA0353 333867 - 335441 + | phosphoglucomutase TTHA0354 336302 - 335460 - | ABC transporter permease TTHA0355 337174 - 336299 - | ABC transporter permease TTHA0356 338515 - 337226 - | ABC transporter, periplasmic substrate-binding protein TERM 284 338518 - 338501 - G 72 -3.3 -4.57073 | GAGCTTCTTCAAAAA GGTCCGC CTTT GCATACC GTACCTCCTTTGGAA TTHA0357 338729 - 338574 - | hypothetical protein TTHA0358 338921 - 339610 + | hypothetical protein TTHA0359 339710 - 339916 + | cold shock protein TERM 285 339936 - 339953 + F 100 -14.1 -5.00895 | opp_overlap 339920 339936 AGGGCTGCCCCTAAA GCCCCCC TGGT GGGGGGC TTTTTCTATCATGGA TERM 286 339953 - 339936 - f 78 -14.1 -3.53091 | opp_overlap 339936, overlap 339920 AGGGCTGCCCCTAAA GCCCCCC TGGT GGGGGGC TTTTTCTATCATGGA TTHA0360 339975 - 340466 + | survival protein SurE TTHA0361 340451 - 340729 + | survival protein SurE TTHA0362 340726 - 341454 + | hypothetical protein TERM 287 341612 - 341589 - g 73 -14.6 -3.22475 | gap 1, overlap 341587 341590 TGGACCTGGACAACA CCCTCCTCCCC TAC GGGGAGG-GGG ACCTGCCGGAGGCCT TERM 288 341873 - 341902 + G 71 -6.3 -4.17316 | overlap 341874 341894 GTGGGGGCCTACACC GTCCTGGTCCCCC CCTT GCGGGAGCAGGAG TTCTTTTACACCCGT TTHA0363 341489 - 341974 + | HAD family hydrolase TERM 289 342012 - 341999 - g 70 -4.5 -4.41548 | gap 1, opp_overlap 341999 CCATAGGGGACAAAA GGCTCG GGG CG-GCC CTCTTGGACGCCGGG TERM 290 342552 - 342601 + G 75 -13.5 -3.54459 | opp_overlap 342548 ACAGGAGAAGACGGG GGACCTCCTCGGGCGGATCCT GGTGCGGA AGGGGCTCCCCGAGGAGGCCC TTTACCGGGCCTTGG TTHA0364 341971 - 344640 + | type IV pilus assembly protein PilF TTHA0365 344653 - 345738 + | type IV pilus assembly protein, pilus retraction protein PilT gatB 345749 - 347158 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 291 347446 - 347458 + G 91 -10.5 -4.71828 | opp_overlap 347433, overlap 347425 GACCTCCTGGCCCAG GGGGC GGA GCCCC TTTTCTTCCTGGACT TTHA0367 347164 - 348165 + | phosphoribosylaminoimidazole synthetase TTHA0368 348162 - 348794 + | phosphoglycerate mutase TERM 292 348826 - 348789 - f 72 -6.9 -4.21908 | opp_overlap 348796, overlap 348796 GACGAGGACCTAAAA GGATAAACCCCCCAGGT TTTG ACCTGGGGGGTTTGGGT ATTGGAGCGGGAGAC TERM 293 348796 - 348819 + F 100 -18.2 -3.76373 | opp_overlap 348789 348796 ACCTAAAAGGATAAA CCCCCCAGGT TTTG ACCTGGGGGG TTTGGGTATTGGAGC TERM 294 348819 - 348796 - f 100 -18.2 -4.21402 | opp_overlap 348796, overlap 348789 ACCTAAAAGGATAAA CCCCCCAGGT TTTG ACCTGGGGGG TTTGGGTATTGGAGC TERM 295 349567 - 349583 + F 77 -7.3 -4.48221 | overlap 349549 349577 GGGGGAGATCAGCCT GTTATCC CCG GGGTAAC TTTTATCCGTTGATC TERM 296 350199 - 350212 + F 79 -4.5 -4.7254 | CTCCTCTTACGAGTT CGCAG AGAG CTGTG TTTTTGGTAAACAGT TERM 297 351510 - 351521 + F 72 -7.2 -4.2354 | AGGCTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TTHA0369 352186 - 352956 + | short chain dehydrogenase/reductase family oxidoreductase TTHA0370 353544 - 353002 - | thioredoxin reductase related protein TERM 298 353906 - 353954 + G 100 -17.9 -4.2558 | CAAGGTGGCCTACCT CGCCCCTTGGCCCCTCCGCCTGG GGG CCGCGAGGCGGGGCCGGGGGGGG TTTTGGTCCCGGGTG TERM 299 353960 - 353979 + G 90 -12.8 -4.30576 | CCGGGGGGGGTTTTG GTCCCGGG TGGC CCCGGGGC TTTTCCTCCTGGGCC TTHA0371 353571 - 354890 + | serine/threonine-protein kinase TTHA0372 354878 - 355216 + | hypothetical protein TERM 300 355404 - 355414 + G 71 -8.2 -4.07568 | GAAGGACTTCCCCGT GGCC ATC GGCC TTTTCGGCACCCGGG TTHA0373 355231 - 357039 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD TTHA0374 357077 - 357727 + | hypothetical protein TTHA0375 358422 - 357874 - | putative glycoprotein endopeptidase TERM 301 358165 - 358147 - Gf 74 -12.4 -3.53444 | overlap 358149 GGAGCTCGCCCCAAA GACCCTGG CCC CCAGGGCC TGGGCGAGGCCGAGG TERM 302 358193 - 358149 - Gf 78 -15 -3.34517 | gap 2, overlap 358147 AGCTCGCCCCAAAGA CCCTGGCCCCCAGGGCCTGGGC GAG GCCGAGGCCC-GCGG-CCAAGG CGATGCGCAGGCCCG TERM 303 358517 - 358531 + GH 79 -11.4 -3.87869 | GCCCTCGGCCTCTAC GCCCAG AGG CTGGGC TTTCTCCCCGCTTGG TTHA0376 358385 - 358726 + | sugar ABC transporter, permease protein TTHA0377 358751 - 359650 + | sugar ABC transporter, permease protein TTHA0378 359697 - 360833 + | sugar ABC transporter, permease protein TTHA0379 360889 - 362142 + | sugar ABC transporter, periplasmic sugar-binding protein TERM 304 362479 - 362454 - g 71 -8.9 -4.07568 | opp_overlap 362477 CCGTGGCCGCCAAAA GCCCCCTCACC GGGG GGTACGGGGAC GCGGAGGGCGGCGGC TERM 305 362818 - 362793 - g 71 -8.9 -4.08216 | gap 1 TCATGGGGGCCAAAA GGCTCAAGGCGG TCT CCGCCCGG-GCC CACAAGGAGACCCTT TTHA0380 362204 - 364066 + | aldehyde:ferredoxin oxidoreductase TTHA0381 364591 - 364037 - | hypothetical protein TERM 306 365022 - 365035 + G 70 -2.3 -4.57341 | GGGCGGGACGGGCGG GGCTT TGGG GGGCC TTTTTGGGGGGCGTT TTHA0382 364775 - 365251 + | hypothetical protein TTHA0383 365255 - 365512 + | putative thioredoxin TTHA0384 365512 - 366351 + | prolipoprotein diacylglyceryl transferase TTHA0385 366353 - 367723 + | UDP-N-acetylglucosamine pyrophosphorylase TTHA0386 367764 - 367985 + | Sec-independent protein translocase protein TatA TTHA0387 367982 - 368722 + | Sec-independent protein translocase protein TatC TTHA0388 368756 - 369823 + | bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase TTHA0389 369826 - 370773 + | polyferredoxin TERM 307 370826 - 370884 + GF 72 -13.7 -3.04398 | gap 1, overlap 370827 370828 370877 TCGTGGTGGTGGGTG GGGGGCTCGCCGGCCTCGTGGTGGCCAC GGAG GTGGCC-CAAAGGGGCAAGCGGGTCCTC CTTTTGGAGCAGGAG TTHA0390 370798 - 371238 + | hypothetical protein TTHA0391 371201 - 371878 + | hypothetical protein TTHA0392 371883 - 372275 + | methylmalonyl-CoA epimerase TTHA0393 372275 - 372613 + | hypothetical protein TTHA0394 373250 - 372567 - | short chain dehydrogenase/reductase family oxidoreductase TERM 308 373006 - 372981 - G 81 -8.9 -4.56597 | gap 1, overlap 372959 GTCGGTGTCCAAAAA CCGCCCGGCGGC GAA GCCGCCC-ACGG TGTGGACCACCCCGT TTHA0395 374244 - 373255 - | hypothetical protein TTHA0396 376715 - 374241 - | hypothetical protein TERM 309 375206 - 375264 + g 77 -10.4 -4.11216 | gap 3, opp_overlap 375206 GCTTGTGGTAGAGGA GGAGGCCGTACCCCCGGTCCTGGAGCCTG GCCT CGGCCTCCAGGG--GGAGGTA-GGCTTCC TTTTCCAGGTCCCAC TERM 310 375938 - 375918 - G 71 -6.7 -4.18018 | overlap 375919 GGCCGCGACCGAAAA CCCGGCCCG CTT CAGGCCGTA CTCCCCCCGGTACTG TTHA0397 377755 - 376712 - | hypothetical protein TERM 311 376751 - 376741 - G 78 -8.2 -4.44797 | overlap 376742 CCAGGAAGAGGAAAA GGCC CAA GGCC CCGTAGAGGAGGTTG TTHA0398 378762 - 377752 - | hypothetical protein TERM 312 378806 - 378794 - R 77 -6.9 -4.4648 | overlap 378801 378802 AGGCGGATGAGAAAA CGAGG AAG CCCCG CCGCGGGGGGCTTAG TTHA0399 379234 - 378818 - | hypothetical protein TERM 313 379256 - 379272 + r 70 -8.7 -3.98762 | CCTCCCTTCCCTGTT TCCAGTG TAG CGCTGGA TTTCGTGTTATCGTT TTHA0400 380436 - 379402 - | zinc-binding dehydrogenase TTHA0401 380825 - 380433 - | hypothetical protein TERM 314 380917 - 380962 + G 95 -17 -4.2349 | gap 3, opp_overlap 380949, overlap 380919 CTGCGAGCCCGTGGA GCCGAGGCTCCTCCGC-CTCCTC GCC GAGGAGAGCGG-GGAGCC-CGTC TTTTACCTCTCGGAG TERM 315 380919 - 380960 + G 91 -18.2 -3.71913 | gap 3, opp_overlap 380949, overlap 380917 GCGAGCCCGTGGAGC CGAGGCTCCTCCGC-CTCCTC GCC GAGGAGAGCGG-GGAGCC-CG TCTTTTACCTCTCGG TERM 316 380977 - 381035 + G 71 -8.7 -4.07687 | gap 2, overlap 380967 380977 CTTTTACCTCTCGGA GGCCTTCTA-CGCCCTC-CTCCCCCGGCT CAA GGCCGAGGGGGCGCAGGCGCTGGAGGCCC TTTTCCCCGGGGCCT TTHA0402 380870 - 381298 + | hypothetical protein TTHA0403 383140 - 381284 - | cell division protein FtsH TERM 317 382499 - 382442 - G 73 -15.3 -3.16668 | opp_overlap 382473, overlap 382463 382466 GAACATCTCCATGAA CTCGCTGGCGGAGACGGAGAAGAAGGG CACC CCCGCCTCCCCCGCCACCGCCCGGGCG AGGAGGGTCTTGCCC TTHA0404 383192 - 384565 + | hypothetical protein TTHA0405 385617 - 384586 - | hypothetical protein ruvB 386588 - 385614 - | Holliday junction DNA helicase B TTHA0407 386614 - 387399 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TTHA0408 387447 - 388373 + | ribosomal large subunit pseudouridine synthase D TTHA0409 388370 - 389263 + | putative modification methylase TERM 318 389529 - 389519 - g 70 -2.4 -4.59773 | GTCCATCCTGAAAAA TCCC TCG GGGT CCTGGCCTAACCGCC TTHA0410 389286 - 389927 + | hypothetical protein TTHA0411 391094 - 389901 - | alpha-aminoadipate aminotransferase TERM 319 390167 - 390195 + g 86 -15.3 -4.11216 | CCTTGGGCACCTCCC GGTCCAGGGCATG GAG CATGGCCTGGGCC TTTTCCCGGTAGACC TTHA0412 392320 - 391190 - | deoxyguanosinetriphosphate triphosphohydrolase, putative TTHA0413 393546 - 392320 - | 3-oxoacyl-[acyl carrier protein] synthase II TERM 320 392894 - 392842 - G 70 -14 -3.21099 | gap 1, opp_overlap 392892, overlap 392844 CGCCTCCAGGACCAA GACCCCGGCCCCCTCCCCCATGACG AACC CGTCCCGGGAGAGGGTGAAGGGG-C GGCTCGCCTTCTCGG TERM 321 392893 - 392844 - G 82 -17.7 -3.17051 | opp_overlap 392892, overlap 392842 CCTCCAGGACCAAGA CCCCGGCCCCCTCCCCCATGACG AACC CGTCCCGGGAGAGGGTGAAGGGG CGGCTCGCCTTCTCG TERM 322 393614 - 393581 - R 72 -4.4 -4.56775 | gap 1, overlap 393582 393584 393586 ACGCCCCGGGAAAAA GGAGAGGCGGGGCGC CCTTC ACGCCCCACC-CGCG TTGCAAGCCCTTGCC TTHA0414 393908 - 393666 - | acyl carrier protein TERM 323 393925 - 393915 - R 74 -2.4 -4.72272 | opp_overlap 393916 393917, overlap 393916 393917 CTCCGTCATGAAAAA CCTC CCG GGGG GATTTTAGCACGACC TTHA0415 394678 - 393941 - | 3-oxoacyl-[acyl carrier protein] reductase TTHA0416 395588 - 394671 - | malonyl CoA-[acyl carrier protein] transacylase TERM 324 395150 - 395163 + g 82 -9.5 -4.37711 | TCTCCACCCCCTCAA GGCCC TCCA GGGCC TTTTGGATTTCCTCC TTHA0417 396556 - 395588 - | 3-oxoacyl-[acyl carrier protein] synthase III TERM 325 395663 - 395653 - G 73 -6.8 -4.39287 | overlap 395645 CGAAGGAGACCAAAA GGAC GTG GTCC CCCTCCCGGATCCGG TERM 326 396605 - 396595 - R 86 -8.2 -4.7173 | opp_overlap 396600 396602, overlap 396596 396597 TACTATACCCAAAAA GGCC GGA GGCC CCGGGCGCGCCCGGG TERM 327 396600 - 396625 + r 100 -21.9 -3.05384 | opp_overlap 396595 396597 396596, overlap 396602 TACCCAAAAAGGCCG GAGGCCCCGGG CGCG CCCGGGGCCTC TTAAATGCCCCACCA TERM 328 396602 - 396623 + r 90 -18.7 -3.08679 | opp_overlap 396595 396597 396596, overlap 396600 CCCAAAAAGGCCGGA GGCCCCGGG CGCG CCCGGGGCC TCTTAAATGCCCCAC rpmF 396903 - 396721 - | 50S ribosomal protein L32 TTHA0419 397499 - 396963 - | hypothetical protein TERM 329 397516 - 397528 + r 86 -6.2 -5.00616 | opp_overlap 397515, overlap 397515 TCCTTAAAAGGATAG CGCC GAAGG GGCG TTTTTTCCAGGGCGG TTHA0420 398067 - 397588 - | putative flavoprotein TTHA0421 399977 - 398091 - | hypothetical protein TERM 330 399285 - 399239 - G 72 -11.5 -3.65902 | gap 1, opp_overlap 399271 CCCAGGCCAGGGAAA GCTCGGGGAAGGCCTCCGCCAG CCTC CTCGCCGAGGCCTTC-CAGCGC TCGTCCTCCAGGGCC TTHA0422 400691 - 399987 - | UDP-N-acetyl-D-mannosaminuronic acid transferase TTHA0423 401395 - 400679 - | hypothetical protein TERM 331 402086 - 402136 + G 73 -15.4 -3.27525 | overlap 402083 402088 CTCTGGCAGCTTGCG GACCTCGGGGTGGGGGTGGAGG TGGAGGC CCTGCCCCTCTACCCCGACGTC TTGGCTTTCGCGGGG TTHA0424 401423 - 402358 + | thiamin-monophosphate kinase TTHA0425 402495 - 403112 + | NADH oxidase (H2O2-forming) TTHA0426 403468 - 403109 - | hypothetical protein TTHA0427 403805 - 403425 - | hypothetical protein TTHA0428 403834 - 404877 + | histidinol-phosphate aminotransferase TTHA0429 404870 - 405454 + | imidazoleglycerol-phosphate dehydratase TERM 332 405514 - 405500 - f 82 -11.4 -4.07568 | GGGGCCCCGGCAAAA GCTCCC TGA GGGAGC CTCCCCGGGCCAGTC hisH 405570 - 406166 + | imidazole glycerol phosphate synthase subunit HisH TTHA0431 407057 - 406137 - | sugar kinase TTHA0432 407202 - 408683 + | 'IMP dehydrogenase/GMP reductase TTHA0433 408910 - 408680 - | hypothetical protein TTHA0435 409806 - 409381 - | disulfide bond formation protein B TTHA0434 408951 - 409436 + | hypothetical protein TTHA0436 410854 - 409940 - | signal recognition particle-docking protein FtsY TERM 333 410134 - 410150 + g 74 -10.1 -4.09685 | overlap 410135 CCTCGTGAAAGCGCT TGGCCTG CTC CAGGCCG TTTTGCCCGGTGACG TERM 334 410751 - 410805 + g 77 -14.8 -3.57615 | overlap 410752 410783 AGGAGGGCCATCTCC AGCTCCTCCAGGACCTCCTCGGGGTC GCC GCCCCAGGGGATGGCCTTGAGGAGCC TTTCCCGGGTCTTGG TERM 335 410752 - 410804 + g 79 -18.3 -2.74248 | overlap 410751 410783 GGAGGGCCATCTCCA GCTCCTCCAGGACCTCCTCGGGGTC GCC GCCCCAGGGGATGGCCTTGAGGAGC CTTTCCCGGGTCTTG TTHA0437 411294 - 410854 - | hypothetical protein TTHA0438 412717 - 411311 - | glutamyl-tRNA synthetase TERM 336 411389 - 411379 - G 74 -2.4 -4.63527 | overlap 411381 CCAGGATCTCAAAAA GCCC CGG GGTC TCCAGGCTCCCCGTG TERM 337 412326 - 412361 + g 78 -8.8 -4.41895 | overlap 412320 TCCTCGGCCTCCTCA GGGGGGATGTTCCGGG CCCT CCCGTCGTAGCCCCCC TTTTCCTTGCGGATT TTHA0439 412772 - 413500 + | ABC transporter, ATP-binding protein TERM 338 413800 - 413774 - gT 79 -11.5 -3.84246 | gap 1, opp_overlap 413793, overlap 413775 GGCTCAAGGAGCAAA GGGCGGCC-CTG GAGG CGGAGGCCGCCC GGGCCCTCGCCGAGG TTHA0441 415641 - 414139 - | HemK family methyltransferase TTHA0440 413503 - 414846 + | hypothetical protein TTHA0442 416223 - 415654 - | DNA/RNA-binding protein (Jag-related protein) TTHA0443 417525 - 416233 - | hypothetical protein TTHA0444 417770 - 417522 - | alpha-hemolysin TTHA0445 418008 - 417775 - | ribonuclease P protein component TERM 339 418109 - 418083 - R 73 -9.2 -3.96216 | opp_overlap 418099, overlap 418084 CTTTGAGGGAAAGAA GCTTGCCCCCCG GGG CGGGGGGCTTGG GGCCTACCGCTTCCG rpmH 418262 - 418113 - | 50S ribosomal protein L34 TTHA0447 418427 - 419188 + | branched-chain amino acid transporter ATP-binding protein TTHA0448 419185 - 421119 + | long-chain-fatty-acid--CoA ligase TERM 340 421277 - 421295 + G 83 -8 -4.64861 | GGCCTACTGGGCCAT GGTCGCCT TGG GGGCGCCC TTTCTTTTGGCCGCG TERM 341 421912 - 421947 + G 72 -3.1 -4.53636 | overlap 421901 421912 421921 CCTTTGTCCCCGGCG GGGGCACCCGGGACG TCTTCC CCTTCCTGGTCCTCC TTTTGGTTCTCTGGT TTHA0449 421116 - 422009 + | branched-chain amino acid ABC transporter, permease protein TERM 342 422936 - 422989 + G 73 -14 -3.3062 | gap 3, overlap 422938 TTCAGCGTGGCTGGG GTGGACG-TGGCGAGCGCCCTAAGGCC CCT GGCCTTCGG-C-CTCGTCATCGTCCTC TTCCTGGTGTTTGAG TERM 343 422938 - 422987 + G 73 -15.2 -3.21378 | gap 3, overlap 422936 CAGCGTGGCTGGGGT GGACG-TGGCGAGCGCCCTAAGGCC CCT GGCCTTCGG-C-CTCGTCATCGTCC TCTTCCTGGTGTTTG TTHA0450 422006 - 423073 + | branched-chain amino acid ABC transporter, permease protein TERM 344 423616 - 423574 - g 70 -12.7 -3.28924 | gap 1, overlap 423577 CATCGCCCGCGAGAA GAAGGGGGCCAAGGTGGCCC TGGT GGTCCACCCCT-CCCCCTTC GGCCGGGCTCCGGTG TTHA0451 423086 - 424309 + | branched chain amino acid ABC transporter amino acid-binding protein TERM 345 424316 - 424339 + F 81 -15.2 -3.53012 | opp_overlap 424311 GGCAAGTAGACCCCG GGAGCCCGGG GTGC CCCGGGCCCC TTTCCCACAAGGCCA TTHA0452 424354 - 425187 + | branched-chain amino acid ABC transporter, ATP-binding protein TERM 346 425217 - 425196 - f 85 -12.9 -4.14243 | CATGTGAGCCCAAAA GGCCCCTGC GCAA GCGGGGGCC TGGCGGCGCAAATGA TTHA0453 425254 - 425994 + | Mn2+/Zn2+ ABC transporter, ATP-binding protein TERM 347 426544 - 426580 + G 78 -2.8 -4.77036 | gap 1 CCTCGCCCTGGTGGT GGCGGTGAAGGTGGTGG GGGT CCTCC-TCGTGGCCGCC TTTTTGGTGATCCCG TTHA0454 425987 - 426793 + | Mn2+/Zn2+ ABC transporter, permease protein TERM 348 427128 - 427139 + G 72 -5.8 -4.36914 | opp_overlap 427117, overlap 427114 ACAAGGTGGGGCGGT GCTC CACC GAGC TTTTGTGGCGGCGGG TTHA0455 426818 - 427267 + | rrf2 family protein, transcriptional regulator TTHA0456 427283 - 428407 + | cysteine desulfurase/cysteine sulfinate desulfinase TERM 349 428729 - 428764 + G 74 -9.8 -4.12188 | gap 2, overlap 428731 CCGGAACCCTCATGC GCCTCCTCCTCGGCCT CCTCGC GGGCC-AGGAGG-GGC TTTTCGCCGTCCTCA TERM 350 429126 - 429153 + G 73 -11.2 -3.75024 | opp_overlap 429120, overlap 429086 429086 CGCCAAGGACCTCGT GGTGCCCGGGGA CTTC TCCTCGGCCGCC TTCTTCCTGGTGGCG TTHA0457 428440 - 429723 + | 3-phosphoshikimate 1-carboxyvinyltransferase TTHA0458 429708 - 430334 + | cytidylate kinase TTHA0459 430338 - 431111 + | hypothetical protein TTHA0460 431075 - 431485 + | MutT/nudix family protein TTHA0461 431482 - 432186 + | dihydropteridine/dihydrofolate reductase TERM 351 432248 - 432228 - f 100 -15.4 -4.56597 | GCTTGGGCGCAAAAA GCCCCGGC TCGAG GCCGGGGC GGGTGGTGGGCCGTG TTHA0462 432397 - 432588 + | hypothetical protein TERM 352 432603 - 432632 + G 91 -19.3 -3.31144 | opp_overlap 432582 AGCCCGGCCTGGCCC CTCCGCCCGGGCC AGAA GGTCCGGGTGGAG TTCTACAAGTACCCG TTHA0463 432585 - 433115 + | hypothetical protein TTHA0464 434122 - 433112 - | hypothetical protein TERM 353 433586 - 433574 - G 77 -10.5 -4.07885 | overlap 433575 CAGGGTGCGGGAAAA GGGGG CCT CCCCC AGGGTGAGGGCCACC TTHA0465 435158 - 434151 - | thioredoxin reductase TTHA0466 436222 - 435191 - | alcohol dehydrogenase TERM 354 436224 - 436243 + r 85 -5.6 -5.00616 | overlap 436225 436226 ACCACCGCGCGCATG CTCCCTCC TTAT GGAGGGGA TTTTTTCACGAAGGG TTHA0467 436717 - 436289 - | hypothetical protein TTHA0468 437261 - 436731 - | hypothetical protein TTHA0469 437374 - 439119 + | peptide ABC transporter, periplasmic peptide-binding protein TERM 355 439134 - 439163 + F 100 -20.8 -3.01924 | overlap 439136 AGCTAGCTTGACGCT CATCCCCGGGGC CGGGCC GCCCCGGGGATG TCTTGGAAAGCCATG TERM 356 439136 - 439161 + F 86 -17.6 -3.06696 | overlap 439134 CTAGCTTGACGCTCA TCCCCGGGGC CGGGCC GCCCCGGGGA TGTCTTGGAAAGCCA TTHA0470 439161 - 440159 + | peptide ABC transporter, permease protein TERM 357 440281 - 440295 + G 77 -7 -4.57569 | GTCCTCTACTTCGTG GCCGCC TTC GCCGGC TTTTTCAGCCCCTAC TTHA0471 440167 - 441513 + | peptide ABC transporter, permease protein TTHA0472 441587 - 442609 + | peptide ABC transporter, ATP-binding protein TTHA0473 442606 - 443589 + | peptide ABC transporter, ATP-binding protein TERM 358 443603 - 443632 + F 74 -15.7 -2.66316 | gap 1, overlap 443601 AAGGCCACCCCAGCT AGAG-GGGCCCCGG CTT CCGGGGCCCGCTCG TCGTATACTGGGCCC TERM 359 444136 - 444166 + G 86 -19.1 -3.14344 | opp_overlap 444132, overlap 444121 444118 GGGGGTGAACATCCA CTCCCTCCTCTCC TACCC GGAGGGGAGGGAG TTCGTGCGGGCGGTG TERM 360 444206 - 444238 + G 100 -21.3 -3.63068 | opp_overlap 444195 AACACCCTGGAGACC CACCTCCTGGCGGAG GCC CTCCGCCGGGAGGGG TTTGACGTCCTCTGG TTHA0474 443648 - 444274 + | acetoin utilization protein AcuB (acetoin dehydrogenase) TTHA0475 444268 - 445392 + | acetoin utilization protein AcuC (putative T-histone deacetylase) TTHA0476 445397 - 445594 + | hypothetical protein TERM 361 446302 - 446284 - g 77 -11 -4.09739 | overlap 446300 CCAAGGGGGCGAAAA GCCTCCTC TAC AAGGAGGC CCTGAACCTGGTGGA TTHA0477 445596 - 446558 + | ATP pyrophosphatase TTHA0478 449471 - 446574 - | trehalose synthase TTHA0479 450179 - 449475 - | trehalose-6-phosphate phosphatase TTHA0480 450460 - 450176 - | trehalose-phosphate synthase related protein TERM 362 451785 - 451798 + G 74 -9.5 -4.09685 | overlap 451785 TGCCCTGGGACGCCT CCCCC TACG GGGGG TTTTCCACGGTGGAG TTHA0481 450566 - 452155 + | oligo-1,6-glucosidase TTHA0482 452160 - 452798 + | hypothetical protein TERM 363 453239 - 453289 + G 75 -12.6 -3.61103 | gap 3, overlap 453220 453255 GCCAAGGTGAAGGGG GC-CCGGTTCGTGGAGGGGC-GGGC CGAG GCCCTGCCCTTCCCCGA-CGGGAGC TTTGACCTCGCCTTC TTHA0483 452789 - 453538 + | ArsR family transcriptional regulator TERM 364 453599 - 453584 - Tf 82 -11.8 -4.0825 | opp_overlap 453582 CCTGGAATGAAACAA GGCCCC TTTC GGGGCC CCTTGGTGCCGGGGG TTHA0484 455098 - 453668 - | apolipoprotein N-acyltransferase TERM 365 454481 - 454471 - Gf 76 -8.2 -4.25104 | TCCCCTGGACCAAAA GGGC CTT GCCC TCGGGGTGCGCCTCG TERM 366 455318 - 455265 - gR 100 -25.4 -3.05384 | gap 2 GGGCCTGGGACCTAA GGGTGGCC-TACCC-CCTCCCCGGGC CCCT GCCCGAGGGGGTGGGCAAGGCCACCC TGGAGTGGACCCGGG TERM 367 455471 - 455484 + Gr 72 -3.7 -4.55295 | overlap 455465 455462 GACCTTCTGGGCCCC GCGCG GGAC CTCGC TTTCTTTCTGGAGCG TTHA0486 456814 - 455681 - | iron-sulfur protein TTHA0485 455069 - 455773 + | phosphoesterase-related protein TTHA0487 457200 - 456808 - | hypothetical protein TTHA0488 457409 - 457179 - | antitoxin of toxin-antitoxin stability system TTHA0489 457462 - 458460 + | homoserine dehydrogenase TERM 368 458975 - 459014 + G 95 -14.9 -4.30978 | overlap 458977 GAACGGGTGCCCTTA GACCCCGGGCTTCCCGG CTTCGC CCTGGAAACCCGGGGCC TTTTCCTCCCTTGAC TERM 369 458977 - 459012 + G 71 -16.1 -2.50381 | overlap 458975 ACGGGTGCCCTTAGA CCCCGGGCTTCCCGG CTTCGC CCTGGAAACCCGGGG CCTTTTCCTCCCTTG TTHA0490 458465 - 459028 + | hypothetical protein TERM 370 460058 - 460107 + G 91 -12 -4.47328 | overlap 460059 460059 GAGGGTGGCCGAGCT TCCCC-CGCCCGTGCCCGCCCGCC TCGA GGCG-GTGGCCGCGGCCGCGGGGC TTTTGTGATAGCCTT TERM 371 460059 - 460106 + G 73 -15.5 -3.27674 | overlap 460059 460058 AGGGTGGCCGAGCTT CCCC-CGCCCGTGCCCGCCCGCC TCGA GGCG-GTGGCCGCGGCCGCGGGG CTTTTGTGATAGCCT TERM 372 460059 - 460105 + G 71 -15.7 -2.56122 | gap 1, overlap 460058 460059 AGGGTGGCCGAGCTT CCCCCGCCCGTGCCCGCCCGCC TCGA GGCG-GTGGCCGCGGCCGCGGG GCTTTTGTGATAGCC TTHA0491 459060 - 460115 + | threonine synthase TTHA0492 460128 - 460436 + | hypothetical protein TTHA0493 460439 - 460735 + | hypothetical protein TTHA0494 461046 - 460708 - | hypothetical protein TTHA0495 462466 - 461039 - | 2-phosphoglycerate kinase TERM 373 461954 - 461927 - G 77 -10.4 -4.07885 | GATGCCTTTGGAAAA GGGGACCCTGGG CGCC CCCGGGGCCTCC TCCACGAAGAGCTCC TERM 374 462008 - 462046 + g 74 -4.3 -4.57341 | opp_overlap 461983, overlap 462009 462011 GTAGCGCTCCCCCGC CTCGGGGCCGTAGAGGC GCCGG GCCTCCTCGGCCACCAC TTTTTCCAGCCGCTT TERM 375 462443 - 462427 - G 87 -12.3 -4.25104 | overlap 462412 462439 462440 GGGCCTCCACCAAAA GCCCCTT GGA AAGGGGC CAGCGTCCGCGGCGC TERM 376 462504 - 462518 + H 85 -5.6 -5.06414 | CATGATACCACTTTT CCCGCT GGC AACGGG TTTTTCTTGACACCC TERM 377 462730 - 462753 + H 81 -15.2 -3.51032 | opp_overlap 462728, overlap 462731 TCGCGCCCACCAAGG TGCCCCGGGG ACCG CCCCGGGGCC TTATACTTGAGCCAT TERM 378 462731 - 462752 + H 87 -18.7 -2.70298 | opp_overlap 462728, overlap 462730 CGCGCCCACCAAGGT GCCCCGGGG ACCG CCCCGGGGC CTTATACTTGAGCCA TTHA0496 462767 - 463156 + | hypothetical protein TTHA0497 464256 - 463159 - | oxygen-independent coproporphyrinogen III oxidase TERM 379 464248 - 464262 + g 70 -2.1 -4.58663 | gap 1, overlap 464233 464250 GACGTGGACGTAGAG GCTAGC CACG GCT-GC TTTTTAAGACCTCCT TTHA0498 464647 - 464249 - | hypothetical protein TTHA0499 464954 - 464637 - | putative nucleotidyltransferase protein TTHA0500 466179 - 464959 - | glycerate dehydrogenase/hydroxypyruvate reductase TERM 380 465070 - 465088 + g 82 -12.4 -4.07568 | opp_overlap 465070 GTTTTCCTCCAGGAA GGGCCTGG GGT CTAGGCCC TTTTCCCACACCGCC TTHA0501 466556 - 466164 - | hypothetical protein TERM 381 466247 - 466200 - G 100 -25.6 -3.53012 | opp_overlap 466193 GTCCGTCCGGTCAAA GCCCTGGCCCTTGTAGAGGAGG GGTT CCCCCTCCACCCGGGCCAGGGC GTAGCTCAGGCAGTC TTHA0502 466816 - 466556 - | hypothetical protein TTHA0503 468105 - 466849 - | glycolate oxidase iron-sulfur subunit GlcF TERM 382 466954 - 466990 + g 80 -11.4 -4.15106 | GAGGCAGCCGATGTT CCCCGTGGCCACGAGG TCCGC CCCCGTGGCCTTGAGG TTTTCCGCCTTCCTC TTHA0504 469153 - 468110 - | glycolate oxidase subunit GlcE TERM 383 469052 - 469003 - G 71 -8.3 -4.13767 | opp_overlap 469013 469015, overlap 469004 469033 GCTCGTACGCCAAAA GGCCCCGGAGGCGGGAGAGGTCC AAAA GGACCTCCCCCTCTTTGGGGGTG GAGAGGGCGGGCTTC TERM 384 469013 - 469042 + g 75 -13.5 -3.57144 | opp_overlap 469004 469003 469033, overlap 469015 CAAAAGGCCCCGGAG GCGGGAGAGGTCC AAAA GGACCTCCCCCTC TTTGGGGGTGGAGAG TERM 385 469015 - 469040 + g 75 -14.7 -3.36515 | opp_overlap 469004 469003 469033, overlap 469013 AAAGGCCCCGGAGGC GGGAGAGGTCC AAAA GGACCTCCCCC TCTTTGGGGGTGGAG TTHA0505 470522 - 469140 - | glycolate oxidase subunit TERM 386 470568 - 470558 - R 72 -8.2 -4.14243 | overlap 470559 CACTTTAGGGCAAAA GGGG GGC CCCC ACCGCGGCGAGGGGC TTHA0506 472146 - 470584 - | malate synthase TERM 387 472230 - 472217 - g 75 -5.9 -4.59773 | TTGTATCTTGAAAAA CAGGG CCGC CCCCG TTACCCTAAGCGGCA TTHA0507 472179 - 473003 + | transcriptional regulator TTHA0508 473046 - 473747 + | MerR family transcriptional regulator TERM 388 474534 - 474523 - g 74 -7.2 -4.30576 | overlap 474524 474525 CCCCGAGGAGGAAAA GGCC CTCT GGCC CTCCCTGGACGAGGA TTHA0509 473807 - 475105 + | N-acyl-L-amino acid amidohydrolase TTHA0510 475457 - 475128 - | CsaA protein TTHA0511 476640 - 475498 - | phenylaceate-CoA ligase/coenzyme F390 synthetase TTHA0512 477743 - 476688 - | hypothetical protein TERM 389 477564 - 477519 - G 75 -12.5 -3.68351 | gap 1, opp_overlap 477548, overlap 477521 477524 GCTGTAGTACTCAAA GACGAGGC-GGGGGAAGAGGTG GAC CACCTCCCCCTCCAGCACCGCC CCGGGGTTGAAGACC TTHA0513 478849 - 477740 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TTHA0514 479340 - 478846 - | phosphoribosylaminoimidazole carboxylase catalytic subunit TTHA0515 479389 - 480345 + | hypothetical protein TTHA0516 480349 - 480651 + | hypothetical protein TTHA0517 481213 - 480677 - | DedA family protein TERM 390 480813 - 480796 - G 72 -3.3 -4.49389 | overlap 480782 480797 AGCCCAGAAGGAAAA GCCCCTG GGTC CAGAGGA GGCTTCCCAGGGCCA TERM 391 480943 - 480959 + g 100 -13.7 -4.57569 | GGGGGCCATAGCGGA GGGCGAG GCG CTCGCCC TTTTTCCAGAGGTCC TTHA0518 481902 - 481210 - | TerC family protein TERM 392 481948 - 481925 - H 88 -8.9 -4.85782 | gap 1, opp_overlap 481931, overlap 481926 481928 CCTCCCAAAAAGAAA GCACCACCGC CAAGC GCGGTGGT-C TCGCCCGAGGGCTTT TTHA0519 482059 - 482436 + | hypothetical protein TTHA0520 482455 - 484185 + | malate dehydrogenase TERM 393 484264 - 484235 - g 72 -11.4 -3.61398 | gap 1, overlap 484185 CTGGGGCTCCAAGAA GGCCCC-GCCTCC CCCCC GGAGCCCGGGGCC TTCCGGCTCCTGGAG TERM 394 484813 - 484853 + G 77 -11 -4.11216 | gap 2, overlap 484815 CTGGTATGTGCGCCT GCCCCTGCCCCCGGAGGGGC TCC GCCCCCCCTTGG-C-GGGGC TTTTGCGGGTGGAGA TTHA0521 484190 - 485071 + | hypothetical protein TERM 395 485150 - 485208 + G 82 -14.5 -3.63991 | gap 1, overlap 485150 AGGGGGACGGGCTTT -TGCGCCTGGACGACCTGGTGGTGGTGG AGGG CTTCCACCCCCAGGTGGGCCAGGTGCGC TTCTTCGGCATGGTG TERM 396 485150 - 485207 + G 86 -20.5 -2.78073 | overlap 485150 AGGGGGACGGGCTTT TGCGCCTGGACGACCTGGTGGTGGTGG AGGG CTTCCACCCCCAGGTGGGCCAGGTGCG CTTCTTCGGCATGGT TTHA0522 485068 - 486798 + | hypothetical protein TERM 397 486917 - 486943 + G 77 -4.2 -4.62069 | overlap 486918 CCATCGTGGAGGAGC ACCTGGCCGTGC GCC GGGCGGTCGGGG TTTTTGACGTGAGCC TTHA0523 486811 - 487860 + | glycine cleavage system aminomethyltransferase T TTHA0524 487879 - 488265 + | glycine cleavage system H protein TERM 398 488332 - 488354 + F 100 -14.1 -4.41494 | AAGGGCGCTTTGTGG CCCCGGGGC AAATG GCCCTGGGG TTTTGCTTGAGGATG TERM 399 488591 - 488557 - g 85 -13.5 -4.07568 | CCTCGCCGCCCAAAA CCTCCCCGCCCACAA GGCCT TCCTGGGCGGGGGGG TGAGGAGCCACCACG TERM 400 489017 - 489053 + G 80 -10 -4.26076 | gap 1 GCCCTGGAGGACCTC GGGCCCTT-CGCCGAGG CGGC CCACGGCGCGGGGGCGC TTTTCGTGGCCGTGG TTHA0525 488375 - 489691 + | glycine dehydrogenase subunit 1 TERM 401 489942 - 489952 + G 70 -2.4 -4.57569 | CAAGCTCCACGAGGA GGCG GCG CGGC TTTTTGCCGACCTCC TTHA0526 489688 - 491112 + | glycine dehydrogenase subunit 2 TTHA0527 492045 - 491161 - | riboflavin kinase/FMN adenylyltransferase TTHA0528 492535 - 492023 - | ADP-ribose pyrophosphatase TTHA0529 492679 - 492873 + | hypothetical protein TTHA0530 492900 - 493406 + | hypothetical protein TTHA0531 494217 - 493390 - | hypothetical protein TERM 402 494004 - 493972 - G 71 -8.9 -4.07885 | CAGGGCCCGGTAAAA GGCGAGGAGGCCGAG GGC CCCGGAGGCCCCGCC CAAAAGGGCATAGGG TTHA0532 495537 - 494266 - | RNA polymerase pricipal sigma factor (RpoD) TTHA0533 496668 - 495541 - | ribosomal RNA small subunit methyltransferase TERM 403 495692 - 495664 - G 84 -6.6 -4.79223 | gap 1, overlap 495666 495667 GGACACGAGGAAAAA CACGCCACCCGGC CTGA GCCGGGCCGC-CG CCACGTTCACGAACG TERM 404 495822 - 495850 + g 77 -10.9 -4.07568 | CGGAGTGGAGGGCCT GGGCCTTCAGGGC GTT GGCCTCGAGGCCC TTTTGCAGGGAGAGG TERM 405 496159 - 496105 - G 71 -9.1 -4.07885 | gap 2, opp_overlap 496117 496122 GATGCGGGCGGAAAA GGCCCGCCAGAGGGAGG-GGAGG-GGC GGG GCCTCCTTCTCCTTCTCCAGGAGGGCC ACCCGGTAGGGCCCC TERM 406 496567 - 496597 + g 73 -15.3 -3.14132 | CTGCAGGAGGTCGTG GACCGGGTCCCGG TACCC CCGGGCCCCGGGC TTGATGAAGAGCCGG TERM 407 496744 - 496729 - H 72 -11.8 -3.53563 | ACATTCTCTTTCAAA CCGCCC GGGG GGGCGG GGAAGGAGGGAAGCG TERM 408 497128 - 497142 + G 78 -11.4 -3.88291 | GCCCGCATCCGGGAG GCCCTG GAG CAGGGC TTTGTGGCGGTGATC TTHA0534 496759 - 497976 + | aspartate kinase TERM 409 498002 - 498039 + G 73 -11.1 -3.86194 | opp_overlap 497971, overlap 498004 498005 CCACCTTTCCTGGGA GGACCTCCTCCGGCTGG TCCG CCGCCTGGCGGAGGCCC TTTCTGGGGAGCCTT TERM 410 498338 - 498371 + G 79 -15.9 -3.28712 | gap 1 CACCCTCCACTTCAA GCCGGGGCGGAACCGG GTG CCGGA-CCGCCCCGAC TTCTACGCCGAGGAG TTHA0535 497976 - 498440 + | purine phosphoribosyltransferase (xanthine-guanine phosphoribosyltransferase) TERM 411 498505 - 498532 + T 100 -21.4 -2.62184 | AGCTTTTGCCGGGGC CCCCATGCTGGC TTGC GCCAGCATGGGG TGGTATAAAGCCCCC TERM 412 498568 - 498542 - T 100 -21.6 -3.85817 | ATGGGGTGGTATAAA GCCCCCACCGCA GGG CGCGGTGGGGGC TCTGAGGCCGGCCTC TTHA0536 499567 - 498584 - | malate dehydrogenase TTHA0537 500448 - 499582 - | succinyl-CoA synthetase alpha chain TTHA0538 501620 - 500445 - | succinyl-CoA synthetase beta chain TERM 413 501978 - 501988 + G 74 -2.4 -4.62069 | GGCTTCCGGGGCGGG CGGC GGA GCGG TTTTTGGCCTGGGCC TTHA0539 501665 - 502699 + | hypothetical protein TTHA0540 503703 - 502693 - | hypothetical protein TTHA0541 504971 - 503700 - | DNA repair protein RadA TTHA0542 507192 - 504982 - | ATP-dependent Clp protease, ATP-binding subunit (ClpA) TTHA0543 507321 - 508841 + | glycyl-tRNA synthetase TTHA0544 509022 - 509258 + | hypothetical protein TTHA0545 509255 - 510250 + | aspartate-semialdehyde dehydrogenase TTHA0546 510944 - 510237 - | hemolysin TTHA0547 510962 - 511273 + | hypothetical protein TTHA0548 511266 - 511694 + | hypothetical protein TERM 414 511731 - 511696 - T 83 -16 -3.53012 | overlap 511700 GCGTGGGGCTTTAAA GCCACCCCAGGCCGGC CAAG GCCGGCCTGGGGACCC TGGCAAAAAGCCCTG TERM 415 511727 - 511700 - T 100 -24.2 -2.64155 | overlap 511696 GGGGCTTTAAAGCCA CCCCAGGCCGGC CAAG GCCGGCCTGGGG ACCCTGGCAAAAAGC TTHA0549 513431 - 511785 - | glutaminyl-tRNA synthetase TTHA0550 514206 - 513445 - | enoyl-CoA hydratase/isomerase infC 514382 - 514816 + | translation initiation factor IF-3 TERM 416 514846 - 514874 + F 81 -12.4 -3.86194 | opp_overlap 514870 CCTCTGGTATAGTGG GGGGGCTTTGGG GAGCA CCCAAGACCCCC TTTGTGGGGGCGCTT rpmI 514909 - 515106 + | 50S ribosomal protein L35 rplT 515118 - 515474 + | 50S ribosomal protein L20 TERM 417 515483 - 515512 + F 73 -14.9 -2.80994 | opp_overlap 515476 515477 GGGCTAAAGGGCCCT TAGAGGCGCCGGG GAGC CCCGGCGCCTCCC TCTCATGCCCTTCCC TTHA0554 515517 - 515987 + | small multidrug export protein TTHA0555 515984 - 517645 + | hypothetical protein TERM 418 517837 - 517865 + G 79 -16 -3.33696 | gap 1, opp_overlap 517824 AAGGCCCTCCTCTTC GGCCTCGCCGGGG CCTA CCCCGG-GGGGCC TTCCTTGGGAGAGGC TERM 419 518317 - 518296 - g 75 -12.9 -3.61398 | overlap 518297 CTCCTCGCCGAAGAA GGGGGGGCC CGTA GGCCCCCCG GCTGAAGGCTATGGG TERM 420 518316 - 518297 - g 72 -16.4 -2.76696 | overlap 518296 TCCTCGCCGAAGAAG GGGGGGCC CGTA GGCCCCCC GGCTGAAGGCTATGG TTHA0556 517645 - 518322 + | hypothetical protein TTHA0557 518949 - 518335 - | superoxide dismutase [Mn] TERM 421 518775 - 518809 + g 75 -15 -3.28712 | overlap 518778 518778 CGAGGTGCCTCAGGA GGACCTCCACCTCCAC CCC GTGGAGGTAGGGGTAC TTCTCCAGGGCGGCG TERM 422 519003 - 518976 - R 95 -17 -3.96148 | opp_overlap 518979, overlap 518979 GCTTCCCACTATAAA GGAGGCCACCCC CTGG GGGGTGGCCTTC CTCACAAAGCCCCTT TERM 423 519000 - 518979 - R 82 -17.3 -3.04122 | opp_overlap 518979, overlap 518976 TCCCACTATAAAGGA GGCCACCCC CTGG GGGGTGGCC TTCCTCACAAAGCCC TERM 424 518979 - 519000 + r 84 -17.3 -3.14132 | opp_overlap 518979 518976 TCCCACTATAAAGGA GGCCACCCC CTGG GGGGTGGCC TTCCTCACAAAGCCC fumC 520424 - 519024 - | fumarate hydratase TTHA0559 520477 - 521667 + | acetyl coenzyme A acetyltransferase (thiolase) TTHA0560 521986 - 521678 - | hypothetical protein TTHA0561 524488 - 522020 - | outer membrane protein TTHA0562 524534 - 525361 + | purine nucleoside phosphorylase TTHA0563 525391 - 526026 + | hypothetical protein TERM 425 526002 - 526012 + F 88 -8.2 -4.85599 | overlap 525996 CACCTTGGTGCGCGT GGGC CGG GCCC TTTTTGTAGACTAGG TTHA0564 526035 - 526487 + | cell division initiation protein DivIVA TTHA0565 526993 - 526448 - | hypothetical protein TTHA0566 527167 - 528678 + | GTP-binding protein HflX TTHA0567 528932 - 528666 - | acylphosphatase TERM 426 528945 - 528961 + H 70 -6.5 -4.25104 | CATGGGGGCATTCTA CCGGG GTTGCCA CCCGG TTTTCATCCCCGCCC TERM 427 529117 - 529136 + G 75 -13.6 -3.55444 | CCGGGGGGAGGTGCG GGAGGTGC GGGG GCACCTCC TTTGGGGCCTGCGCC TERM 428 530965 - 531002 + G 70 -13.3 -3.35046 | overlap 530960 530958 GGGGGGACGGCTTCT CCTCGCCCTCTCCGGCC CCGT GGAGGGGGAGGGGGAGG TCTTTCCGGGGCTCG TERM 429 533265 - 533248 - g 72 -12.7 -3.53761 | opp_overlap 533261 GAAGGCCCGGGGAAA GGGGCCT CTGG AGGCCCC CATCGCCCTCACCCT TERM 430 534947 - 534992 + G 70 -13.3 -3.28712 | gap 1 GAGGCCGGGGGCGGC CGGG-TCCTCGTGGAGGGGAGG CTC CTTCCCTTGCGCGGGGAGCTCG TTCTGGAGGAGGCCG TERM 431 535759 - 535773 + G 72 -3.4 -4.56597 | GGCCCAGGGGGAGGT GGTGCT GGA GGCCCC TTTTTCGGGGAGGGC TTHA0568 528992 - 537010 + | hypothetical protein TERM 432 536991 - 537030 + F 72 -11.4 -3.53811 | gap 1 CCCGCTTCAGCGTGG GCGCGGCCTACCGGTGGTA GCA TGGCGCCGGTATG-CGCGC TTTGGCCAAGCTGGC tdh 537023 - 538054 + | L-threonine 3-dehydrogenase TERM 433 539059 - 539075 + G 82 -15.1 -3.64822 | TAGGGAGGTGCAGGT GGGCCCC GAT GGGGCCC TTTACGTCACCACCT TTHA0570 538094 - 539152 + | putative oxidoreductase (glucose dehydrogenase) TTHA0571 539548 - 539138 - | small heat shock protein TERM 434 539736 - 539710 - g 70 -12.9 -3.35996 | overlap 539711 CATCGGGACGGACAA GCCCACGCCCG AGGAG CGGGCGCGGGT GCCCCACCACCTGGT TERM 435 539735 - 539711 - g 71 -16.4 -2.61383 | overlap 539710 ATCGGGACGGACAAG CCCACGCCCG AGGAG CGGGCGCGGG TGCCCCACCACCTGG TERM 436 540086 - 540031 - g 85 -4.5 -5.00616 | opp_overlap 540046, overlap 540033 CCGCGTGGGAAAAAA CCCGAGGAG-GCTCGTCCGGGCCCTGG AGGT CCTGAGGC-GCACGGGCACTCCCCCGG CCCGGTTTCCCAAGA TERM 437 540296 - 540277 - g 73 -13.6 -3.30124 | GGCCATCGGCTACAA GGAGGTGG CGGG CCACCTCC TGGGGGCCTACGGCC TTHA0572 539567 - 540475 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 438 540581 - 540561 - g 90 -16.9 -3.60296 | CAGGCCTACCTGAAA CGGGTCCAG GAG CTGGACCCG GGCCTCGGCGCCTTC TTHA0573 540483 - 541898 + | glutamyl-tRNA(Gln) amidotransferase subunit A TTHA0574 541898 - 542641 + | DNA polymerase III epsilon subunit TERM 439 542937 - 542895 - g 75 -13.3 -3.60296 | overlap 542896 GAGGTGGAGCTTAAA GCGGCCCCCAGGCCGGG CCAGAGGCC CCCGGCCCGGGAGCGGG AGGCTAGGCCGGAGG TERM 440 542936 - 542896 - g 76 -16.8 -2.75963 | overlap 542895 AGGTGGAGCTTAAAG CGGCCCCCAGGCCGGG CCAGAGGCC CCCGGCCCGGGAGCGG GAGGCTAGGCCGGAG TTHA0575 542643 - 543695 + | hypothetical protein TTHA0576 544662 - 543673 - | putative pyruvyl-transferase TTHA0577 546347 - 544647 - | hypothetical protein TERM 441 545223 - 545213 - G 71 -8.2 -4.08394 | overlap 545199 AGACCGCGCCCAAAA GGGC GTA GCCC AGGCTCCTCGCCCAC TTHA0578 546979 - 546344 - | uridine kinase TERM 442 547017 - 546994 - R 100 -21 -3.96148 | CCCCTCCATGATAAA GGGGCGGGGG GAAG CCCCCGCCCC CATTCCCCTCGGGCC TTHA0579 548163 - 547033 - | sugar ABC transportor, ATP-binding protein TTHA0580 548776 - 548228 - | hypothetical protein TTHA0581 548793 - 549242 + | hypothetical protein TERM 443 549662 - 549712 + GT 73 -13.9 -3.16191 | opp_overlap 549685 GCCATGGGCGTGGAC GCCGCGGCCTCGGGGAGC-CAGAAG GGC CTCATGTGCCCCCCG-GGCCTCGGC TTCGTGGCCCTCTCC TTHA0582 549131 - 550189 + | aspartate aminotransferase, subgroup IV TTHA0583 550742 - 550152 - | hypothetical protein TTHA0584 550870 - 551445 + | hypothetical protein TTHA0585 552509 - 551442 - | branched-chain amino acid ABC transporter, permease protein TERM 444 552165 - 552149 - G 77 -10.8 -4.1585 | overlap 552140 GGAGAAGCCCCAAAA GGGCGG CGATC CCGCCC CCGAGGAGGATCCCC TTHA0586 554364 - 552511 - | putative long-chain-fatty-acid--CoA ligase TERM 445 553756 - 553731 - G 71 -8.9 -4.14739 | GGAGGTAGCTGAAAA CCCAGGCCCCC CTCT GGAAGCCCAGG GCCTTCCCCACCGCC TERM 446 553767 - 553789 + g 71 -6.9 -4.25104 | CCAGGGCCTTCCCCA CCGCCTCGT GCCCG GCGAGGAGG TTTTGGTGGGAGAGC TTHA0587 555120 - 554371 - | branched-chain amino acid ABC transporter, ATP-binding protein TTHA0588 555887 - 555111 - | branched-chain amino acid ABC transport ATP-binding protein TTHA0589 556762 - 555887 - | branched-chain amino acid ABC transporter permease protein TERM 447 556053 - 556040 - G 74 -2.3 -4.72986 | overlap 556041 GACCCCGAGCAAAAA CCCCG CCGC CAGAG CCCCGCCCACGGCGT TERM 448 556274 - 556284 + g 71 -8.2 -4.07568 | GGCCCGGACCAGGAC GCCG TAG CGGC TTTTCCGGAGGAGCC TTHA0590 557975 - 556791 - | branched-chain amino acid ABC transporter amino acid-binding protein TERM 449 557462 - 557472 + g 71 -8.2 -4.07885 | AGACGAGGGCGATCC GGGC CTT GCCC TTTTGCAGGCGGATC TTHA0591 559108 - 558173 - | UDP-glucose 4-epimerase TERM 450 558655 - 558687 + g 70 -2.5 -4.56597 | opp_overlap 558662 558663, overlap 558667 AGACGGAGAGGTAGT GCTCAAAGGCCGC CTTGCTC GCGGCGTAGGGGC TTTTTGGGCGGGGGG TERM 451 559135 - 559113 - H 93 -11.3 -4.3898 | gap 1, opp_overlap 559131 AGCACGCGCATAAAA CCTCCCGGGC CGAA GCCCGG-AGG CAGTCTACCACCTGG TTHA0592 559166 - 559354 + | hypothetical protein TTHA0593 559921 - 559355 - | thiol-disulfide isomerase/thioredoxin TTHA0594 559972 - 561048 + | putative periplasmid solute-binding protein TTHA0595 562088 - 561045 - | galactokinase TTHA0596 562941 - 562096 - | ABC transporter solute-binding protein TERM 452 562821 - 562783 - G 75 -14.4 -3.53012 | opp_overlap 562801, overlap 562784 GGGGGTGGGCTCAAA GGTGTGGGGGTCGGCCCC CGG GGGGACGACCGCCACCGC CGCCACCCGATTTCC TTHA0597 563030 - 564691 + | hypothetical protein TTHA0598 566169 - 564724 - | putative transport integral membrane protein (chloride channel) TERM 453 565754 - 565734 - G 75 -16.1 -3.01791 | overlap 565709 AGGGGGTGTGGAAGA GGGCGGCGA TGG CCGCCGCCC CCCCGGCGAGGAGGA TERM 454 566050 - 566013 - G 86 -14.8 -4.08767 | gap 1, overlap 566002 565998 566014 GCCAGGCGCTGAAAA GCCCCACCGCCCCGCCC GCGAG GGGCAGGGCGA-GGGGA GGGACCAGGAGGAGG TERM 455 566049 - 566014 - G 81 -18.3 -3.05046 | gap 1, overlap 566002 565998 566013 CCAGGCGCTGAAAAG CCCCACCGCCCCGCCC GCGAG GGGCAGGGCGA-GGGG AGGGACCAGGAGGAG TTHA0599 567526 - 566153 - | protoporphyrinogen oxidase (HemG) hemH 568467 - 567514 - | ferrochelatase TTHA0601 569489 - 568464 - | uroporphyrinogen decarboxylase (HemE) TERM 456 568688 - 568734 + gH 75 -14.2 -3.29471 | GGGCGCGGGCCCAGG GGAGGGGGGTGTGGTGGTCCAG GCC CAGGACGTCCCCGCCCGCCTCC TTCATGTCCTCGAGG TERM 457 569145 - 569175 + gH 72 -6.7 -4.25104 | gap 1, overlap 569173 GGGGACGGCCTCCTC GGGCACGAGGGGCC TCAA GGCCTC-CACGCCC TTTTCGTCCCGGACG TERM 458 569489 - 569511 + Gr 77 -4 -4.65933 | overlap 569490 CGTTCACGAGGTCCA TGCTAGCATG GGG CATGCGCGCG TTTCTTTTGGCCCTG TERM 459 569767 - 569736 - gR 82 -11.5 -4.07568 | CCTGGCCCGGGAAAA GGCCCTCCTCCAG CGGGCC CGGGAGGAGGGGC TCTACCCGGACCCCG TERM 460 570145 - 570189 + Gr 81 -15.1 -3.53224 | gap 2 GGCTCCAGGGAGGAG GGCGGGGACCTGGGGTGCGCC CCCGA GG-GCAC-CTACGTCCCCGCC TTTGAGGAGGCCCTC TTHA0602 569416 - 570429 + | peptidyl-prolyl cis-trans isomerase TTHA0603 571260 - 570412 - | hypothetical protein TTHA0604 572962 - 571337 - | medium-chain-fatty-acid--CoA ligase TERM 461 572197 - 572222 + g 70 -12.5 -3.34398 | overlap 572195 CCACCAGGGAGGCGG GGTCCAGCCTG GGCC CGGGCAGGACC TGTTTGGCCCCCACC TTHA0605 574075 - 573218 - | 4-hydroxybenzoate octaprenyltransferase TTHA0606 574464 - 574102 - | aspartate alpha-decarboxylase TERM 462 574519 - 574535 + H 70 -3.8 -4.54727 | CGCCCCTTGCTTTCG TAAACT TTCTT AGTTTA TTTTGGTTTACGAAC TERM 463 574789 - 574732 - g 76 -9.1 -4.19238 | gap 1 TTCTCAACGTTAAAA GCGGCTTCTG-CCCAGAGGACTGCGC CTACTGC GCCCAGTCCGCTAGATCCCAAGCCGC CATCGCCCGGTACCC TTHA0607 574551 - 575540 + | biotin synthase (biotin synthetase) TTHA0608 577221 - 575671 - | RNA-biniding protein TERM 464 575743 - 575776 + g 85 -8.8 -4.61231 | gap 2, opp_overlap 575739, overlap 575742 GGTGTAGAGCACCTG GCCCG-G-GGCGGCCT TCCT GGGCCGCCACACGTGC TTTTTCCGGGTGTAG TTHA0609 577973 - 577206 - | tRNA (adenine-N(1)-)-methyltransferase TTHA0610 578857 - 577994 - | hypothetical protein TTHA0611 579183 - 578854 - | hypothetical protein carB 582326 - 579240 - | carbamoyl phosphate synthase large subunit TTHA0613 582447 - 582731 + | hypothetical protein TERM 465 582842 - 582859 + F 77 -12.7 -3.63744 | overlap 582840 GCTCACCCCAAGCCG CCACCCC GAAA GGGGTGG TATTTTAAAGGGGGG TERM 466 583753 - 583743 - g 74 -2.4 -4.63527 | CGAGGACCTCAAAAA CCGG GTG CGGG AAAGCCTCAAGCGCC TTHA0614 583009 - 584223 + | trigger factor TTHA0615 584289 - 584873 + | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 467 584900 - 584920 + G 73 -13.9 -3.28712 | GCTTCTGCGGCCTCC GCCCCCCCG AGA CGGGGCGGC TTCTGGAAAGCCCCC clpX 584860 - 586059 + | ATP-dependent protease ATP-binding subunit TTHA0617 587606 - 586086 - | nicotinate phosphoribosyltransferase TERM 468 587337 - 587368 + g 74 -7.3 -4.19238 | gap 1, opp_overlap 587351 GAGGTAGCGGAGGTA GTC-CTCGGCGAAG AGGGG CTTCCCCGAGCGGC TTTTGAGGTTGCGGA TERM 469 587477 - 587490 + g 73 -9.5 -3.89346 | AGCCCGCCTGGTGGG CCCCG TAGT CGGGG TTTCTCCGGTAGAAG TERM 470 587955 - 587897 - g 77 -14.6 -3.55444 | overlap 587898 CCCCGAGGTCCTAAA CCGCACCCGGCC-CGAGGTGGTGCG-GGAG ATC CACCTCGC-CTACCTCGAGGCCGGG-GCCG AGGTCATAGAGACCA TTHA0618 587649 - 591206 + | 5-methyltetrahydrofolate homocysteine S-methyltransferase TTHA0619 591724 - 591203 - | hypothetical protein TERM 471 591987 - 591997 + G 77 -4.6 -4.62069 | AGGGCTTCTTCCCCG CCTG GAT CGGG TTTTTCGCCTACGAG TERM 472 592055 - 592069 + G 76 -11.4 -3.78778 | CACAAGCCCCTCCCC GGCCTC CCC GAGGCC TTCTTCCTCTACTAC TTHA0620 591749 - 593611 + | alternative anthranilate synthase component I+II (TrpEG) TTHA0621 593608 - 594348 + | putative 4-amino-4-deoxychorismate lyase TERM 473 594351 - 594385 + F 76 -6.3 -4.56597 | opp_overlap 594367, overlap 594353 594373 CTATACTGAGTAGCG GTACCGCCAGCCCAA AGGCC TTGGGCTGGTGCCCC TTTTTGCACGGGAGG TTHA0622 594406 - 594873 + | transcription elongation factor GreA TTHA0623 595549 - 594860 - | DNA repair protein RecO TTHA0624 595533 - 595778 + | hypothetical protein TTHA0625 595797 - 596555 + | hypothetical protein TERM 474 598514 - 598534 + G 77 -11.1 -4.05677 | overlap 598515 ACCCGCCGCTACCGC GCCCTCCTC CAG GAGGAGGGG TTCTTTGACTTCTTT TERM 475 598515 - 598533 + G 71 -14.6 -3.01779 | overlap 598514 CCCGCCGCTACCGCG CCCTCCTC CAG GAGGAGGG GTTCTTTGACTTCTT TTHA0626 596552 - 599128 + | phosphoenolpyruvate carboxylase TERM 476 599146 - 599185 + T 70 -10.6 -3.61178 | overlap 599159 599160 ACGTCTGCTGGGTTG CCGGCCTAAGGCTTGGGG GCTG CTCCAAGCCGAAGCTCGG TTTGGGGTACCTGCC TERM 477 599159 - 599201 + T 100 -9.8 -5.18726 | overlap 599146 599160 TGCCGGCCTAAGGCT TGGGGGCTGCTCCAAGCCGA AGC TCGGTTTGGGGTACCTGCCG TTTTTCTTCTGGGGC TERM 478 599160 - 599200 + T 73 -11.1 -3.70512 | overlap 599146 599159 GCCGGCCTAAGGCTT GGGGGCTGCTCCAAGCCGA AGC TCGGTTTGGGGTACCTGCC GTTTTTCTTCTGGGG TTHA0627 599595 - 599221 - | large-conductance mechanosensitive channel TTHA0628 599974 - 600135 + | Sec-independent protein translocase protein TTHA0629 601199 - 600132 - | TPR repeat-containing O-linked GlcNAc transferase TERM 479 600906 - 600872 - G 72 -12.8 -3.53012 | CCGCCTGCCGGTAAA GGGCCACGTAGGCCTC GGA GAGGACCATGTAGCCC CCCAGGTAGCGGGGG hslU 602469 - 601219 - | ATP-dependent protease ATP-binding subunit TERM 480 601372 - 601350 - G 77 -11.3 -4.08216 | gap 1, opp_overlap 601349 GCACCTTCTCCAAAA CGGTGGCGAG CCGC CTCGCC-CCG ATGTCCTCGAGCTCT TTHA0631 603032 - 602466 - | ATP-dependent protease peptidase subunit TTHA0632 603411 - 603043 - | nucleotidyltransferase TTHA0633 603791 - 603408 - | hypothetical protein TERM 481 603725 - 603702 - G 72 -16 -2.70932 | opp_overlap 603699 TTGCGCGGCGAAGCA GGCCCAGGCG TAGT CGCCTAGGCC CAAGCTTCCCTGGGC TERM 482 605126 - 605146 + G 74 -4.5 -4.54727 | overlap 605119 CGGCGAGGGCCCTGG CCGAGGGGG AAG CCCCTGAGG TTTTGCTTTCCGCCG TTHA0634 603865 - 605259 + | magnesium chelatase related protein TTHA0635 605249 - 605551 + | nucleotidyltransferase TTHA0636 605563 - 605922 + | hypothetical protein TERM 483 606921 - 606911 - g 78 -2.4 -4.89852 | GGAGATCTACAAAAA CGCC TGG GGCC TGGACCCCCTGATCC TTHA0637 605919 - 607142 + | hypothetical protein TTHA0638 607142 - 607366 + | hypothetical protein TTHA0639 607689 - 607363 - | nucleotidyltransferase TERM 484 607621 - 607642 + gT 85 -8.7 -4.63218 | gap 1 GAGGACCTCGGGGAA GGTGG-CGAG GAG CTCGGCCGCC TTTTCTTCAAGGGCC TTHA0640 608062 - 607649 - | hypothetical protein TERM 485 607911 - 607942 + gr 71 -9.4 -3.86015 | opp_overlap 607930 TGGCCGAAGGCCTCG GCCCCCAAGGCG AAATAAAC CGCTTTGAGGGC TTTCTCCGCCGCCTG TERM 486 607988 - 607930 - GR 95 -11 -4.46233 | gap 2, opp_overlap 607911 607982 CCAAGGCGAAATAAA CCGCTTTG-A-GGGCTTTCTCCGCCGCC TGATG GGCGGCGAAGCAAGCCCATTCCCAGTGG CCAAGCTCCAGGCTC TTHA0641 609948 - 608059 - | hypothetical protein TTHA0642 611202 - 609961 - | putative glycosyltransferase TTHA0643 612339 - 611245 - | putative glycosyltransferase TERM 487 611941 - 611953 + gr 70 -4.8 -4.36596 | overlap 611916 611915 CAGGCGCTCCATGGC GAGG GCGAG CCTC TTTCTTCCTTCTGGA TTHA0644 613513 - 612308 - | hypothetical protein TTHA0645 614523 - 613510 - | putative glycosyltransferase TERM 488 613818 - 613804 - G 70 -2.8 -4.56597 | opp_overlap 613787 TGCCCTTTGGAAAAA GAGG GCGGCTT CCTC ATCGGGTACGTAGCG TERM 489 614324 - 614336 + g 87 -6.3 -5.00616 | overlap 614311 TAGAGGCAGTCGGGC TTCTC TGT GAGAA TTTTTTGCCAAAGGG TTHA0646 614581 - 614898 + | hypothetical protein TTHA0647 616040 - 614916 - | putative glycosyltransferase TERM 490 615261 - 615239 - G 71 -6.2 -4.19817 | overlap 615244 CGTAGGTAGCGAAAA GCAGATGAGC ATT GCTCATGAGC TCTAGCGCCTTTTCG TTHA0648 617146 - 616031 - | glycosyltransferase TERM 491 616842 - 616827 - G 75 -5.4 -4.59984 | gap 1 AAAACCCAGAGAAAA GGC-GTC CTT GACCGCC AGGCGGCCTGGAGAG TTHA0649 618418 - 617153 - | putative O-antigen transporter TERM 492 617532 - 617519 - G 80 -3.8 -4.87291 | opp_overlap 617525 617525, overlap 617520 CAGCGTAAGCAAAAA GGCT TGCCAG AGCC AGCGCCGGGCTTCGG TERM 493 618059 - 618038 - G 70 -5 -4.41494 | overlap 618039 618052 TACGGTCAAGGAAAA GTCCCCCC GAAGTA GGGGGATC GCCCACCCCAGCCCG TTHA0650 619797 - 618424 - | putative phosphoglucomutase/phosphomannomutase TERM 494 619885 - 619857 - H 74 -5.2 -4.51097 | gap 1 TGAAGTAGCATAAAA GCGTGCCCG-AGG ACCA CCTGCTGGAACGC CTGGAGAAGCTGGAG TTHA0651 619859 - 620125 + | hypothetical protein TTHA0652 620139 - 620633 + | hypothetical protein TTHA0653 621226 - 620630 - | hypothetical protein TERM 495 620995 - 621029 + g 91 -18.6 -3.61398 | opp_overlap 620994 620993 GGAGGAGGAGGAAGC GGGCCTTGTCCTCCTC GGA GAGGAGGACGGGGGCC TTGTTCCGGCCCACC TTHA0654 621300 - 622352 + | ATP-binding Mrp/Nbp35 family protein TERM 496 622491 - 622469 - g 70 -13.4 -3.28924 | CACCGCCGCCCAGAA GCACCTCCAG GAC CTGGAGGAGC GGGGCCTCGCCGCCT TTHA0655 622356 - 622958 + | hypothetical protein TERM 497 623433 - 623471 + G 81 -8.7 -4.56597 | opp_overlap 623381 ATGGTCCTCCCCCAG GCGGAGGCGAACGCC AAGCGGAAC GGGGTGCGCCCCCGC TTTTTGGAGGGAAGC prmA 622962 - 623726 + | ribosomal protein L11 methyltransferase TERM 498 624271 - 624249 - g 77 -10.4 -4.11216 | CCTGGACCCGGAAAA GCCCCTCGCC CTC GCCGTGGGGC CGGAAGGGGGGTTCG TTHA0657 623728 - 624414 + | hypothetical protein TERM 499 624651 - 624632 - gT 89 -10.7 -4.25104 | opp_overlap 624612 624645, overlap 624614 CCTCCTCCAGGAAAA GGCCCTC TTCCTG GAGGGCC CCGGGGCCCACGAGG TTHA0659 625658 - 624756 - | hypothetical protein TTHA0658 624411 - 624842 + | hypothetical protein TTHA0661 627832 - 626633 - | hypothetical protein TTHA0660 625898 - 626692 + | short chain dehydrogenase/reductase family oxidoreductase TERM 500 626818 - 626800 - Gf 77 -8 -4.38154 | overlap 626802 AGAGGCGGTAGAAAA GCCCGAGG CTC CCCCCGGC GAGGGCGCTTCCCAG TERM 501 627716 - 627691 - Gf 83 -12.5 -4.07568 | overlap 627706 GGGCCGCCCCCAAAA GCCCCAGGGAG ACCA CCCCCTGGGCC GCCTCCGGCCCCACG TERM 502 628230 - 628258 + G 80 -17.3 -3.14132 | GGGAGCTCGCCCGCT GGCACGGGCCCCC CGA GGTGGCCCGCGCC TTCCTGCGGGAGAAG TERM 503 628307 - 628276 - g 70 -9.4 -3.78934 | gap 1 CCTGCGGGAGAAGAA GGCGGAGGGGCTATC CCC GA-AGGCCCTCCTCC TCGCCTACCACGAGG TTHA0662 627905 - 628381 + | hypothetical protein TERM 504 628687 - 628713 + G 73 -15.9 -2.94144 | gap 1, overlap 628688 628689 GCAAGCGCTTTGGCC GG-GGGGAGGGG AAGG CCCCTCCCCTCC TCGTTTCCGTGCGGA TTHA0663 628449 - 631046 + | pyruvate phosphate dikinase TTHA0664 631951 - 631043 - | NADPH quinone oxidoreductase TERM 505 632042 - 632017 - H 77 -5.3 -4.68209 | overlap 632018 ACTTTAAGAAATAAA GCCCCGGCCTA CCCT TAGGCCATGGA GCTCGGGCTCTACAC TTHA0665 632038 - 633078 + | N5,N10-methylenetetrahydromethanopterin reductase sat 634105 - 633056 - | sulfate adenylyltransferase TERM 506 633704 - 633662 - G 75 -13.3 -3.61398 | gap 1, opp_overlap 633658 633656 CCTTTGCCGGAAGAA GGCCCGCACCTCCTCCGGGG TCTT CTCCAGGGG-GGTGCGGGGC CTGGGCTTTAGGACC TERM 507 633896 - 633913 + g 81 -8.3 -4.57073 | overlap 633878 GAGGGCCACGGTGTT CCCTGGG CCTA CCCTGGG TTTTTCCCGGAACTG TTHA0667 634830 - 634108 - | hypothetical protein TTHA0668 635563 - 634823 - | hypothetical protein TERM 508 634980 - 634939 - G 70 -12.9 -3.29263 | gap 1, overlap 634927 AGAGGGCCCCGAGAA GCCCCCCCGCCACCCC-GCC CGA GGCCAGGGCGAGGAGGAGGC TTGGGGCCACCTGGC TTHA0669 636232 - 635564 - | phosphoadenosine phosphosulfate reductase (CysH) TTHA0670 636870 - 636220 - | shiroheme synthase (precorrin-2 oxidase/ferrochelatase) TERM 509 636535 - 636507 - G 76 -8.8 -4.26344 | gap 1, overlap 636508 AGAGGGCCACCAAAA GCTCCCCGC-GCC TTAG GACGGCGGGGAGG ATGGCGCTCGCGTTT hemD 637628 - 636867 - | uroporphyrinogen-III synthase TERM 510 637252 - 637288 + g 74 -9.4 -4.11394 | gap 1, overlap 637247 637246 TAAAGCTGGAGGGCG GCC-ACGCCCCTTCCTT GGGG AAGGAGGGGGAGGAGGC TTTTGGAGGTGCCGT TTHA0672 639397 - 637640 - | sulfite reductase TERM 511 639100 - 639131 + g 74 -10 -4.11216 | CGTGGTGGAGCTGGA CCGCCTGGCGGGTG GTCA CGTGGGCCAGGCGG TTTTCCGCGTAGCGC TERM 512 639210 - 639254 + g 74 -5 -4.56597 | overlap 639184 ACGGGGAGCTTGATG CGG-ATCATGTGGTGCTCGGGG CGG CCCCGGATGCCGTA-GATGCCG TTTTTGAGCCGGAAG TERM 513 639401 - 639435 + r 85 -17.8 -2.64794 | overlap 639411 AAGCCCTGCCATCCC TCACCTCCGACCCCCG GTC CGGGGGTTGGTGGGGA TGGTATACCATTGAG TTHA0673 639982 - 639461 - | hypothetical protein TERM 514 639584 - 639556 - G 77 -14.5 -3.53811 | CCCACCGGGCCCAAA GGGGGAGGGCCTG GCC CAGGGCGTCCCCC AGGAGGGCGAAGAGG TTHA0674 640222 - 640842 + | thiamin-phosphate pyrophosphorylase TTHA0675 640829 - 641023 + | putative thiamine biosynthesis protein ThiS TERM 515 641473 - 641523 + G 74 -7.3 -4.19276 | gap 1, overlap 641474 GCACGGCCACGGTGA TGCCCCTCG-CCGCCCCCATCGGC TCGG GCTGGGGGGTGAGGACGAGGGCCC TTTTGGAGCTTTTCG TERM 516 641756 - 641788 + G 74 -9.9 -4.07568 | gap 1, opp_overlap 641720, overlap 641787 641787 GCGGCCCAGGGAGGC GGCAAGCCCCTCCA GCCCGG TGGAGGGGG-TGCC TTTTACCCCGACCGG thiG 641025 - 641831 + | thiazole synthase TTHA0677 641845 - 642783 + | putative oxidoreductase TTHA0678 642770 - 644077 + | thiamine biosynthesis protein ThiC TERM 517 644390 - 644406 + G 76 -8 -4.43012 | CCTCACCGCCCTCGC CCCAAG CCTTT CTTGGG TTTTCCTCTTCCGCT TTHA0679 644082 - 645383 + | putative transport protein TERM 518 645744 - 645708 - g 77 -10.7 -4.08216 | opp_overlap 645720 645721, overlap 645733 TGATGGTGGCGAAAA GCGGGGACCCCCTCCTC GCC AAGGAGGCGGCGGCCGC CCTCAAGGAGAGGCT TERM 519 645720 - 645758 + G 71 -6.4 -4.19238 | opp_overlap 645708 645733 645754, overlap 645721 AAAGCGGGGACCCCC TCCTCGCCAAGGAGGCGG CGG CCGCCCTCAAGGAGAGGC TTTTCCCCTTGGCGG TTHA0680 645380 - 646156 + | phosphomethylpyrimidine kinase (ThiD) TERM 520 646174 - 646196 + T 79 -6.8 -4.63527 | GGGTTCCGTAACGGT GCCCAGGCCG GGG CGGTGAGGGC TTTTTGGGGTACTCA TTHA0681 646835 - 646209 - | hypothetical protein TTHA0682 647983 - 646832 - | hypothetical protein TERM 521 647619 - 647677 + g 82 -14.5 -3.63569 | GGCTCGGCGGGGCTG GCCTCCC-GGCCTAGGGCGGGGGCTTCCC GAG GCGGGGCGGCC-TCCTGGGCCAGGGAGGC TTCTTCCCGGCTTGG TTHA0683 648413 - 648036 - | TolR-type transport protein TTHA0684 648760 - 648410 - | TolQ-type transport protein TTHA0685 649612 - 648806 - | sugar ABC transporter, permease protein TTHA0686 650370 - 649612 - | sugar ABC transporter, permease protein [C-terminal] TTHA0687 650720 - 650304 - | sugar ABC transporter, permease protein [N-terminal] TERM 522 650754 - 650731 - R 100 -13.8 -5.44119 | opp_overlap 650738 650742, overlap 650732 CGCATGGGAAAAAAA GGGGGTGGGC CGAG GCCCACCCCA CGCGGCCTCTTACTG TERM 523 650753 - 650732 - R 95 -17.3 -3.85748 | opp_overlap 650738 650742, overlap 650731 GCATGGGAAAAAAAG GGGGTGGGC CGAG GCCCACCCC ACGCGGCCTCTTACT TTHA0688 652023 - 650764 - | sugar ABC transporter, substrate-binding protein TTHA0689 653038 - 651965 - | putative xylose repressor [C-terminal] TERM 524 653034 - 653002 - GH 78 -9.9 -4.07568 | gap 1, opp_overlap 653030 GCCCCTCCTCCAAAA GCC-CCTCCTGGAG CAGCTC CTCCACGAGGCGGC TCACGGCGCTCTTGG TERM 525 653953 - 653933 - g 77 -15.5 -3.53091 | ATGCTCGCCCTGAAA CCCGTCTTC CGG GAAGACGGG GTGGTGACGGCGGGG TERM 526 654055 - 654025 - g 77 -10.5 -4.11216 | gap 1, opp_overlap 654028 CGGGGACCGGGAAAA GGCCCTG-GCCT TGGGCCTG AGGCCCAGGGCC CGCTTCCTCGCCCGG TERM 527 654028 - 654058 + G 73 -14.6 -3.14344 | opp_overlap 654025 GGACCGGGAAAAGGC CCTGGCCTTGGGCC TGA GGCCCAGGGCCCGC TTCCTCGCCCGGGTG TTHA0690 653261 - 654415 + | acetyl-CoA acetyltransferase TERM 528 654953 - 654963 + GF 81 -8.2 -4.56597 | CCGGGTGGTGACGGT GGCC CCG GGCC TTTTTGACACGCCCC TTHA0691 654426 - 655154 + | Type II 3-hydroxyacyl-CoA dehydrogenase TERM 529 655606 - 655638 + GT 75 -9 -4.09685 | overlap 655607 TACGCCCTGGCCCTC GCCGCCCTCAAGGG CCTCC TCCTGGGGGGCGGG TTTTACGAGGTGGCC TTHA0692 655126 - 655956 + | fatty acid Co-A racemase related protein TTHA0693 656708 - 655953 - | 3-hydroxybutyrate dehydrogenase TERM 530 656023 - 655988 - G 71 -14.6 -3.04144 | opp_overlap 655986 GGTCTATGGGGAAGA CGGCCCCGGTGATGGC GCTG GCCTTCTCCGAGGCCA GGAAGAGGGCGAGCT TTHA0694 657422 - 656718 - | branched-chain amino acid ABC transporter, ATP-binding protein TTHA0695 657835 - 657419 - | amino acid ABC transporter ATP-binding protein [C-terminal] TERM 531 657718 - 657764 + Gg 90 -16.6 -3.59979 | gap 1 GACGCTTGTCCTCGA GGAGGGTGAGCTCCGAGGCCA AGGCCC TGGCTCCGGAGCTC-CCCGCC TTTGAGGTGGAAAGG TERM 532 658548 - 658572 + Gr 71 -6.3 -4.25104 | GCGGGGGAGGCGGAG GCCTTGGGCTT CTC GGGGCCGAGGC TTTTCCTCCGCCAGG TERM 533 659774 - 659739 - gR 100 -20.4 -4.72272 | opp_overlap 659714 659713, overlap 659740 659741 GCGCTCTACGAAAAA GGGCTCCGCCTCCGCC TTGT GGCGGAGGCGGAGCTG GAAGGGGACTAGGCC TERM 534 659773 - 659740 - gR 100 -23.9 -3.43042 | opp_overlap 659714 659713, overlap 659739 659741 CGCTCTACGAAAAAG GGCTCCGCCTCCGCC TTGT GGCGGAGGCGGAGCT GGAAGGGGACTAGGC TERM 535 659772 - 659741 - gR 100 -27.4 -2.65504 | opp_overlap 659714 659713, overlap 659740 659739 GCTCTACGAAAAAGG GCTCCGCCTCCGCC TTGT GGCGGAGGCGGAGC TGGAAGGGGACTAGG TTHA0696 657678 - 659786 + | hypothetical protein TTHA0697 661990 - 659783 - | bifunctional preprotein translocase subunit SecD/SecF TTHA0698 662356 - 662078 - | hypothetical protein infB 664076 - 662361 - | translation initiation factor IF-2 TERM 536 664003 - 664027 + gr 77 -12.2 -3.64822 | overlap 664004 GCCACCCCCATCTGG TCCAGGAGCT CCAAA AGCTCCTGGG TTTCCATGCCCAGCT TTHA0700 664320 - 664045 - | hypothetical protein TERM 537 664131 - 664094 - GR 74 -12.5 -3.48924 | opp_overlap 664124 664125, overlap 664095 TCACCTCCTAGATAA GCGGCCAGGGCCTCGGC CAAG GCCCTGGCCTTGGCCCC GGCGAAGCGCCGGAG TERM 538 664124 - 664095 - GR 75 -15.7 -2.6914 | overlap 664094 CACCTCCTAGATAAG CGGCCAGGGCCTC GGCC AAGGCCCTGGCCT TGGCCCCGGCGAAGC TERM 539 664124 - 664150 + gr 82 -11.4 -4.07568 | opp_overlap 664094, overlap 664125 GCCAAGGCCCTGGCC TTGGCCCCGGCG AAG CGCCGGAGCCGC TTTTCCGAGCGGCAC TERM 540 664125 - 664149 + gr 74 -14.9 -3.04398 | opp_overlap 664094, overlap 664124 CCAAGGCCCTGGCCT TGGCCCCGGCG AAG CGCCGGAGCCG CTTTTCCGAGCGGCA nusA 665480 - 664317 - | transcription elongation factor NusA TTHA0702 665970 - 665497 - | hypothetical protein TERM 541 665976 - 665949 - G 70 -9.8 -3.85698 | opp_overlap 665938 665936 665932, overlap 665953 CGCCCCCTTCACAAA GGAAGGGTGGGT TTAC ACCCACCCCCGC CCTTGGGAGCACTGC TERM 542 665972 - 665953 - G 79 -13.6 -3.6053 | opp_overlap 665938 665936 665932, overlap 665949 CCCTTCACAAAGGAA GGGTGGGT TTAC ACCCACCC CCGCCCTTGGGAGCA TERM 543 666275 - 666261 - H 72 -8.5 -4.03978 | AAGCGGGGACACAAA CCCGG CTAGC CCGGG GCCACGCCCTCTAAC TERM 544 666457 - 666436 - H 75 -12.9 -3.41051 | opp_overlap 666431 666437, overlap 666437 CCACCTCCACCACAA GGGGGCGCC TTCG GGCGCCCCT TGCCTTTTGGGGCGG TERM 545 666437 - 666456 + H 85 -16.4 -3.36823 | opp_overlap 666436 666437, overlap 666431 CACCTCCACCACAAG GGGGCGCC TTCG GGCGCCCC TTGCCTTTTGGGGCG TERM 546 666456 - 666437 - H 77 -16.4 -2.64416 | opp_overlap 666437 666431, overlap 666436 CACCTCCACCACAAG GGGGCGCC TTCG GGCGCCCC TTGCCTTTTGGGGCG TTHA0703 666579 - 667694 + | cell wall endopeptidase TTHA0704 667816 - 668709 + | pyridoxine biosynthesis protein TTHA0705 668690 - 669061 + | transcriptional repressor SmtB TERM 547 669076 - 669055 - f 73 -3.7 -4.64676 | CCACGCGGAAGAAAA CACTTGACC AGTT GCTCAAATG ATGCTACCCTGGGGG TERM 548 669353 - 669380 + G 74 -2.6 -4.75174 | gap 1 CTGGCGCTGGGCCTT GGTTTCC-GGAGG GCT TCTCCTGGCGGCC TTTTTGGCTTCGCTC TERM 549 670727 - 670737 + G 74 -2.4 -4.72272 | TTTGGCTTTGGGCAC GGCC ATA GGGC TTTTTCCTGAGGAAA TTHA0706 669093 - 671147 + | cation-transporting ATPase TTHA0707 671183 - 671758 + | glutamine amidotransferase subunit PdxT asnC 673146 - 671830 - | asparaginyl-tRNA synthetase TERM 550 673189 - 673205 + r 74 -10.1 -3.83998 | GCGTTTATCCCCTTG GGCCTTC CGT GAGGGCC TTTCCTATCCCCTGA TTHA0709 674025 - 673210 - | putative hydrolase TERM 551 673615 - 673590 - G 79 -12.5 -3.73224 | CCAGGGGGGAGGAAA GGCGGAGGAGG TCGG CCCCTTCCGCC TCCACCCCGAGGAGG TTHA0710 674933 - 674040 - | phenazine biosynthesis protein related protein aspS 676672 - 674930 - | aspartyl-tRNA synthetase TERM 552 675617 - 675638 + g 70 -13 -3.33261 | CCCCTCCTCCACCCG GGCCCAGG CGAGGC CCTGGGCC TTGTGGCGCTTGGCC TERM 553 676228 - 676263 + g 72 -11.8 -3.67775 | gap 1, overlap 676226 TGGCCTTGATGACCC GGTGGCGCAGGC-GCAG GTT CTCCTGCATGCGCCGCC TTCTTAGGTCCAGGT hisS 677962 - 676697 - | histidyl-tRNA synthetase TERM 554 678216 - 678266 + G 80 -12.3 -4.0896 | gap 1, overlap 678261 CGTGGACCCGCCCGC CCCGCCGGGGCCCATGGCC-TTCC TTAA GGTCCGGCCGGAGGCCCGGGCGGG TTTTCCCCCGCCTTT TTHA0713 678007 - 678324 + | hypothetical protein TTHA0715 679798 - 678779 - | ABC transporter ATP-binding protein TTHA0714 678371 - 678967 + | hypothetical protein TERM 555 679189 - 679159 - GT 77 -13.8 -3.39668 | overlap 679151 679160 TCTCAAAGCCCAGAA GCCGCGCCGCGCTC GCC GTGTGCGGGGCGGC GAGGACCTCCTCCGG TTHA0716 680442 - 679768 - | molybdenum ABC transporter, permease protein TERM 556 679883 - 679837 - GR 71 -15.1 -2.50016 | gap 1, overlap 679836 679834 GGCGAGGAGGAAGAG GCTTAGGCCGAGGAGGACCAGG CTCG CCCGGGCCGCCTCGGCG-AAGC GCAGCGCCTGGACCA TTHA0717 681311 - 680442 - | molybdenum ABC transporter molybdate-binding protein TTHA0718 682087 - 681470 - | uracil-DNA glycosylase TTHA0719 682452 - 682084 - | hypothetical protein TERM 557 683472 - 683504 + G 73 -15.6 -2.89564 | gap 1 GCCTCCTCCTCGAGG CCCCGGGG-CGGG TGCGCTTC CCCGTCCCCGGGG TGTATCGGCTCCGCA TTHA0720 682532 - 683596 + | hypothetical protein TTHA0721 683597 - 684163 + | hypothetical protein TTHA0722 684200 - 685438 + | histidinol dehydrogenase TERM 558 686109 - 686076 - g 70 -2.9 -4.56597 | overlap 686077 686078 686088 GCCCTGGGGCAAAAA CCCCCTGGAGAAGGC GAGG GCCCTGGCCCGGGAA CGGGGCTGGGACTTC TTHA0723 685435 - 686232 + | iron(III) ABC transporter, solute-binding protein TERM 559 686237 - 686292 + F 72 -5.2 -4.34402 | gap 1, opp_overlap 686216 GCCAGGCTTAAGCCG GGGCCTGGGGGTGC-GGCGTATAGTGG AGG CCATGAAGCGCCTGCTCTTTGGGGCCC TTTTCCTCTCCACGG TTHA0724 686268 - 687572 + | serine protease TERM 560 687808 - 687781 - g 73 -13.5 -3.40403 | gap 1, overlap 687784 CGTGGGCTACCACAA GAGGGCCCCGGA GCGCT TCCGGGGCC-TC GCCGACACCATCCTC TERM 561 687806 - 687784 - g 71 -16.3 -2.56271 | overlap 687781 GGGCTACCACAAGAG GGCCCCGGA GCGCT TCCGGGGCC TCGCCGACACCATCC TERM 562 688655 - 688630 - g 74 -9.6 -4.08216 | overlap 688631 GGAGGTGCTGGAAAA CGGCCCGGGC CGCCTC GCCCAGGCCT TGGGCGAGGCCCTCG TTHA0725 687608 - 688753 + | membrane-bound protein LytR TERM 563 689054 - 689030 - T 100 -20 -4.25104 | opp_overlap 689030 TCCCCGGCACCAAAA CGCCCCGGGC TTTAG GCCCGGGGCG TTTTCCCTCGCGTGG TERM 564 689030 - 689054 + T 100 -20.7 -4.1899 | opp_overlap 689030 TCCCCGGCACCAAAA CGCCCCGGGCT TTA GGCCCGGGGCG TTTTCCCTCGCGTGG TTHA0726 691780 - 689072 - | aconitate hydratase TTHA0727 692239 - 691886 - | hypothetical protein TTHA0728 692990 - 692244 - | hypothetical protein TERM 565 692313 - 692300 - G 74 -8.1 -4.25104 | GGCCCTCGAGGAAAA GGAGG ACCT CCTCC CGGACCTCTTCCCAC TTHA0729 696286 - 692987 - | AcrB/AcrD/AcrF family efflux transporter TTHA0730 697461 - 696283 - | hypothetical protein TTHA0731 698436 - 697465 - | hypothetical protein TTHA0732 699698 - 698433 - | hypothetical protein TERM 566 698706 - 698672 - G 82 -12.8 -4.07687 | opp_overlap 698675 ACCGGGCGCCCAAAA GGCCCGCCTTGAGG CTTTCCT CCTGCAGGCGGGCC TGGCGGGAGGCGGCG TERM 567 698844 - 698874 + g 79 -16 -3.30771 | CCGGTAGCGGCCGCC CCCGGGCAGGGCGG TGG CCGCCTGGGCCGGG TTCTGGCGGGTGTAG TTHA0733 700125 - 699691 - | MarR family transcriptional regulator TERM 568 699969 - 700006 + g 100 -21.3 -3.85698 | overlap 700002 CGAGCTGGGAGGGGA GGTCCACCCCCTTGGCC AGGA GGCCGAGGAGGTGGGCC TTTCTCGGGGAGAGG TTHA0734 700284 - 701621 + | hemolysin-related protein TTHA0735 701602 - 701976 + | cytidine deaminase TTHA0736 702647 - 701973 - | hypothetical protein TTHA0737 703486 - 702635 - | putative dihidrodipicolinate synthase TERM 569 703325 - 703295 - G 73 -14.7 -3.21416 | gap 1, opp_overlap 703283 703312 GAGGCCCACGAGGAA GGGCTTCCTGGGCC TAAG GGCCC-GGAGGCCC CGGGCCCTTTCCTCG TERM 570 703312 - 703332 + g 85 -15.4 -3.73224 | opp_overlap 703295 GCTTCCTGGGCCTAA GGGCCCGG AGGCC CCGGGCCC TTTCCTCGGGGGTGA TTHA0738 705408 - 703483 - | hypothetical protein TTHA0739 705426 - 706088 + | L-serine dehydratase, beta subunit TTHA0740 707113 - 706136 - | sensor histidine kinase TERM 571 706348 - 706397 + g 90 -15.8 -4.08692 | gap 2, overlap 706366 706393 CCTCCACGAGGAGCA CGCCTTCCCCCAC-CCGG-AGCCG GACG CGGCTTTTGGCGTGGCGGAGGGCG TTTTCCAGGAGGTTG TTHA0741 708929 - 707097 - | GTP-binding protein LepA TERM 572 708046 - 708017 - G 75 -14.3 -3.55563 | gap 1, overlap 708029 AGTCCACGGGGTAAA GCCCGGCGAAGACC ACG GG-CTTGGCCGGGC GGAAGCCGGGGTAGG TERM 573 708979 - 709006 + r 73 -13.4 -3.28712 | gap 1 CTCGGGTCCCTAGGA GGGGCGCC-GCTC CAG GAGCCGGCACCCC TTGTACCGCCAGACC TTHA0742 710205 - 708973 - | hypothetical protein TERM 574 709183 - 709160 - G 90 -16 -3.78775 | gap 1 GGGGGGAGGAGGAAA GGCC-GGGCGG TGC CCGCCCAGGCC AGCAGGCGGTAGCTC TERM 575 709906 - 709878 - G 70 -14.5 -2.92896 | overlap 709873 709875 ACCAGAGAAAGACGA GGCCGAGGGTCTG GGC CAGGTCCTCGGCC ACCAGGTAGAAGGGC TTHA0743 712102 - 710243 - | glycosyltransferase related protein TERM 576 710633 - 710615 - G 80 -3 -4.78107 | overlap 710616 GATGAGGAGGAAAAA CCCCAGGA ACT TCCAAGGA CCCACCTGCCGGAGA TTHA0744 712469 - 712089 - | hypothetical protein TTHA0745 714065 - 712509 - | hypothetical protein TERM 577 714387 - 714406 + H 100 -15 -4.67353 | opp_overlap 714359 GGCGTTTGCCTTTAG CCCCTGCC TCCC GGCAGGGG TTTTTCCCTACCTCC TTHA0746 714458 - 715312 + | iron ABC transporter, substrate-binding protein TERM 578 716254 - 716295 + G 73 -10.7 -3.78034 | gap 1 CTGGCCCGGCCCGCC GAGCTTCCCGTGG-GCGTGG TCA CCACCCTCCTCGGGGGGCCC TTCTTCCTCTACCTC TTHA0747 715309 - 716337 + | iron ABC transporter, permease protein TERM 579 716568 - 716585 + G 76 -8.4 -4.25104 | opp_overlap 716567 ACCTCCCCCAAAACG GCCCCT ACCCCG AGGGGC TTTTGGTGGAGGAGG TTHA0748 716324 - 717076 + | iron ABC transporter, ATP-binding protein TTHA0749 717057 - 717389 + | hypothetical protein TERM 580 718058 - 718079 + G 83 -5.7 -4.8048 | overlap 718061 GGCGGGGAAGCCTTT GGAGGTGGC CTAC GCCGCCCTC TTTTTGCTCTCCGAC TTHA0750 717429 - 718166 + | 3-oxoacyl-[acyl carrier protein] reductase TERM 581 718201 - 718169 - f 100 -21.4 -3.01712 | gap 1, overlap 718172 GGCCCCGGCCTAAGA GCACCCCATGCGGGC CCAA GCCCGCATGGGG-GC CCCGAAAAGGCCTAG TERM 582 718199 - 718172 - f 100 -22.8 -2.73875 | overlap 718169 CCCGGCCTAAGAGCA CCCCATGCGGGC CCAA GCCCGCATGGGG GCCCCGAAAAGGCCT TERM 583 718399 - 718415 + G 80 -9.3 -4.27192 | overlap 718411 CCTCCTCGCCGCCTT GGCCCTC CCC GTGGGCC TTTTCCTCGCCCTTT TTHA0751 718274 - 718549 + | hypothetical protein TERM 584 718599 - 718642 + G 76 -17.4 -2.73875 | gap 1, overlap 718596 CCTGGTGGAGGAGGG CCTCCTC-CCCGGGGCCGTGG TCC TCGTGGCCCGGGGTGGGGAGG TGGTCTTCCAGGGGG TERM 585 718990 - 719007 + G 70 -2.7 -4.57073 | GGGGTGGACCGGTTT GACCT GAGCCGGG AGGTC TTTTTGGAGCGCCTC TERM 586 719298 - 719267 - g 77 -15 -3.53012 | TCCTCCCGGTGGAAA CCCCCCCGCCCCGG TACG CCGGGGGGATGGGG GGCGTGGGCACCGCG TTHA0752 718549 - 719715 + | beta-lactamase family protein TTHA0753 720299 - 719697 - | L-allo-threonine aldolase TERM 587 719939 - 719924 - G 76 -3.9 -4.62069 | opp_overlap 719927, overlap 719926 GCCCCAGGCGAAAAA GCCCC TCCGCC AGGGC GCGGGCCATCTCGTG TTHA0754 720963 - 720304 - | transcriptional repressor TTHA0755 720987 - 722561 + | gamma-glutamyltranspeptidase (acylase) TERM 588 722951 - 722973 + G 72 -13.4 -3.53444 | overlap 722941 GGGAAGCCTCGAGGA GGCCCTGGAG GCC TTCCGGGGCC TTTCGGGGCGGGTGG TTHA0756 722571 - 723764 + | beta-lactamase related protein TTHA0757 724474 - 723761 - | hypothetical protein TERM 589 724549 - 724535 - R 77 -5.6 -4.63218 | overlap 724536 724537 CTTGGTCTAAGAAAA TGGCCC TTC GGCCCA GGGAGGCTTCCCAAG TTHA0758 725437 - 724526 - | hypothetical protein TTHA0759 726589 - 725447 - | homoserine O-acetyltransferase TERM 590 725509 - 725520 + g 76 -7.2 -4.3467 | TGAGGAAGGCGTCGT GCCC GTGG GGGC TTTTGATCTCCCGGT TERM 591 725655 - 725614 - G 70 -13.6 -3.14527 | overlap 725612 CAATGCCCACGAAGA GGGAGGGGATGGCCCTGA GGCGCT TCAGGGCCTCCTCCACCC CGCCCCGGCCCCGGC TTHA0760 727851 - 726586 - | O-acetyl-L-homoserine sulfhydrylase TERM 592 727966 - 727929 - R 100 -8.4 -5.41746 | opp_overlap 727957 727959 727962, overlap 727930 727962 AAGGGGCCAAAAAAA GCCCCTTCCCGGCG TCCGTTCTCT CGCCAAGAAGGGGT TGGGCGTGGCGCTTA TERM 593 727965 - 727930 - R 79 -11.9 -3.83963 | opp_overlap 727957 727959 727962, overlap 727929 727962 AGGGGCCAAAAAAAG CCCCTTCCCGGCG TCCGTTCTCT CGCCAAGAAGGGG TTGGGCGTGGCGCTT TTHA0761 728594 - 728184 - | iron-sulfur cluster biosynthesis protein SufE TTHA0762 729308 - 728604 - | short chain dehydrogenase TTHA0763 730401 - 729310 - | zinc-dependent dehydrogenase TERM 594 729844 - 729861 + g 76 -7.7 -4.41616 | CAGGACCAGGACCTC CTCAGGC CAGG GCTTGAG TTTGTTTAAGCCCCT TTHA0764 731459 - 730398 - | hypothetical protein TTHA0765 731505 - 732497 + | hydrolase TERM 595 732579 - 732569 - f 70 -2.4 -4.64861 | GGGGCCCAAAAGAAA GGGG GAG CCAC ATGAAAAGGGTTTCG TERM 596 732633 - 732645 + G 77 -6.2 -4.50976 | GGGTGTAGGGGTGGC GGCC ACTGC GGCC TTTTCTCCTCTGGCG TERM 597 732896 - 732909 + G 72 -3.7 -4.52345 | overlap 732897 ACTGGGCGGGGCGGA TGCCG GTGA CGGCC TTTCTTTCCTCCTAT TERM 598 733000 - 733018 + G 70 -4.4 -4.42386 | GACATCGCCCGGAGG GCCTTCGC CGA GCAGGGGC TTTTCTACGTGGGCC TERM 599 733081 - 733071 - g 74 -2.4 -4.62783 | CATCCACTCCAAAAA GCCG ATC CGTC GCTTTGAGGATTTCA TTHA0766 732580 - 733665 + | ABC transporter, solute-binding protein TTHA0767 733670 - 734182 + | putative small integral membrane tranport protein TERM 600 734232 - 734246 + G 76 -3.5 -4.72272 | overlap 734236 734237 GTCCTTCTCCTCACC GGCTA CCCCC TGGCC TTTTTGGTCGGGGGG TTHA0768 734172 - 735485 + | putative large integral membrane transport protein TTHA0769 736483 - 735482 - | periplasmic serine protease TERM 601 735800 - 735837 + g 81 -16.3 -3.53012 | gap 1 GCCCAGGTAGGGCCA GGACTCCTCGAGGCCCGC CCG GAGGGCCTCCAGG-GTCC TTTCCCAGCCGAAGA TERM 602 736311 - 736295 - G 76 -3.5 -4.72272 | overlap 736296 CTTGCCCACGAAAAA GCCCGTG CCC CGGGGGC CTTCCGCCACCTCCA TTHA0770 738875 - 736488 - | ATP-dependent protease La (Lon protease) TERM 603 736671 - 736698 + g 70 -4 -4.4078 | opp_overlap 736662 736664, overlap 736673 GAGAATGACCCGGTG GATCCCCGCC TGGTGGGC GGCGAGGAGC TTTTCCTTCACCCCG TTHA0771 740674 - 738995 - | hypothetical protein TERM 604 739932 - 739882 - G 85 -14.1 -4.08216 | gap 2 GGAGTTCCCGCAAAA CCTCCACC-CGGCCG-CCGCTTC GCAGGTA GAAGCGGGCGGCCTCGGCGAAGG GCAGATGGCGTAGAG TERM 605 740731 - 740707 - H 83 -4.9 -5.03314 | CTCAGCGTTAAAAAA GCGTGAAAACC CTT AGCTCTCTCGC CATGCAGTTTAACGC TTHA0772 740844 - 741653 + | hypothetical protein TTHA0773 741705 - 742448 + | hypothetical protein TTHA0774 742460 - 743146 + | hypothetical protein TERM 606 743157 - 743182 + F 100 -23.3 -4.11394 | overlap 743155 TCTAAGGCCCTCTGC CCCCCCGGGGG CTTT CCCCCGGGGGG TTTTCCCGCTAAACT TTHA0775 743204 - 743986 + | hypothetical protein TTHA0776 744055 - 744471 + | hypothetical protein TTHA0777 744473 - 747337 + | hypothetical protein TTHA0778 747861 - 747340 - | hypothetical protein TERM 607 748605 - 748577 - g 82 -14.5 -3.61398 | overlap 748578 748580 CGCCCTGGCCAAGAA GCACCGCCTCCAG GGC CTGGTGGCGGTGA ACACCACCCTTGCCC TERM 608 748604 - 748578 - g 79 -18 -2.76696 | overlap 748577 748580 GCCCTGGCCAAGAAG CACCGCCTCCAG GGC CTGGTGGCGGTG AACACCACCCTTGCC TERM 609 748602 - 748580 - g 70 -14.8 -2.93073 | overlap 748578 748577 CCTGGCCAAGAAGCA CCGCCTCCAG GGC CTGGTGGCGG TGAACACCACCCTTG TERM 610 748662 - 748636 - g 77 -6.4 -4.58395 | opp_overlap 748636, overlap 748609 748637 GGGAGGGCCTAAAAA GCCCCTGGGC TAAGGAG GCCGGGGGGC TTTCGGGAAGGCCCC TERM 611 748846 - 748869 + G 70 -12.4 -3.34233 | overlap 748847 748868 ACGGGGGGCCCCTCT TCCCCAGGAG GCTC CTCCTGGGGC TTCTCCGCCTTATGG TERM 612 748847 - 748868 + G 71 -15.9 -2.60219 | overlap 748846 CGGGGGGCCCCTCTT CCCCAGGAG GCTC CTCCTGGGG CTTCTCCGCCTTATG TTHA0779 747888 - 748928 + | dihydroorotate dehydrogenase 2 TTHA0780 749463 - 748984 - | hypothetical protein pyrC 750748 - 749468 - | dihydroorotase TERM 613 749783 - 749798 + g 74 -4.6 -4.48987 | CGGGATGCCGAAGGG GGCCCT TAGG AGGTCC TTTTCCTTCTCCGCC TERM 614 750611 - 750599 - G 77 -6.9 -4.59773 | opp_overlap 750604, overlap 750600 GTGGAGGTCTAAAAA CCCCG GGG CGAGG AAGCACCCCGTGCCG pyrB 751653 - 750745 - | aspartate carbamoyltransferase catalytic subunit TTHA0783 752195 - 751650 - | pyrimidine regulatory protein PyrR TERM 615 752235 - 752214 - R 100 -11.5 -5.42259 | opp_overlap 752213 752215, overlap 752215 CCACCTCCAAAAAAA GGCGGAGGC CAAG GCCTCCGCT CCTTCCCTTCCTTTC TERM 616 752234 - 752215 - R 87 -15 -3.84633 | opp_overlap 752215 752213, overlap 752214 CACCTCCAAAAAAAG GCGGAGGC CAAG GCCTCCGC TCCTTCCCTTCCTTT TERM 617 752215 - 752234 + r 73 -15 -2.808 | opp_overlap 752214 752215, overlap 752213 CACCTCCAAAAAAAG GCGGAGGC CAAG GCCTCCGC TCCTTCCCTTCCTTT TTHA0784 752569 - 752396 - | hypothetical protein TTHA0785 753364 - 752627 - | hypothetical protein TTHA0786 754305 - 753370 - | glycerate dehydrogenase/glyoxylate reductase TTHA0787 754445 - 754329 - | hypothetical protein TERM 618 754467 - 754524 + r 86 -16.1 -3.55622 | gap 1, overlap 754513 AGTCTACCCGGGACT GACCCGCGGGTCAACCGGCGAGGCGGAG GAC CGCCGCCTC-CAGGGCGAGCCACGGGTC TTTCCCCCCCTTGGC TTHA0788 755355 - 754477 - | DNA polymerase III, delta subunit TERM 619 754966 - 755011 + g 74 -9.6 -4.11216 | gap 2 CAGGGAGGCCAGGTA CTGGGCCACCCCGCCCGGGAGC CTGA GC-CCCAGGC-GCTTGGCCCGG TTTTCCAGGTGCCGC TERM 620 755253 - 755226 - G 80 -12 -4.07568 | gap 1 CCCCGCCCCCGAAAA GCCCTGGGGCCAG GGC CTGGGCC-AGGGC CTCCGGGGTGGGCTC TTHA0789 756547 - 755390 - | putative glutaryl-CoA dehydrogenase TTHA0790 757183 - 756557 - | putative acetyltransferase TERM 621 757841 - 757870 + Gr 71 -12.1 -3.34398 | overlap 757834 757838 TACACGGGGAAGGCC CTGGAGGCCCTCT TGGT GGAGGTCCTCCGG TCTTTCAGGCCCACC TTHA0792 758776 - 758243 - | hypothetical protein TTHA0791 757217 - 758299 + | hypothetical protein TTHA0793 759367 - 758780 - | hypothetical protein TERM 622 758916 - 758949 + gFH 76 -3.7 -4.64676 | gap 1, overlap 758902 ACGGCGAAGGTCCGG GCCTCG-GCCTCCG TGCGCAC CGGGGGCTCGCCGC TTTTGTTGAGGCTCG TERM 623 759668 - 759656 - gR 80 -9.1 -4.2349 | GCGCCAGACGGAAAA CCGGA AGT TCCGG GAGATCCTCAAGCAG TTHA0794 759366 - 760586 + | pilus assembly protein PilC TTHA0795 761013 - 760561 - | hypothetical protein TERM 624 760604 - 760637 + g 100 -14.6 -4.56775 | opp_overlap 760588 GCTTCCGCCACCTCC GGGGGAACCGGCAT CACGGA AAGCCGGTTTCCCC TTTTTACGAGGGGGT TTHA0796 761082 - 761549 + | hypothetical protein TTHA0797 761564 - 762919 + | (s)-2-hydroxy-acid oxidase subunit (GlcD) TERM 625 762946 - 762992 + F 70 -3.8 -4.57353 | gap 3, opp_overlap 762966, overlap 762949 TTTTCACGGCGTTTT GACGGCGG-GGAGGCCAT-AATG GGGC CATGGAAGGCCTCTACCGCC-TC TTTTATGTCCTCGCC TERM 626 763061 - 763098 + G 76 -3.3 -4.62069 | gap 1, overlap 763062 CTGGCATCCGCCTAG GGGCGG-GGAGTGGGGGT TCT ACCTTCTCTTCGCCTTCC TTTTTGGGCTCGCCC TERM 627 763520 - 763559 + G 75 -15.6 -3.06515 | overlap 763520 763522 CCTAGAGCGGGAGGC GGCCCGGGTGGAGCGGGG CGGG CCCCCCTTCGCCCTGGTC CTTTTGGACCTGGAC TERM 628 763520 - 763560 + G 82 -13.2 -4.11216 | gap 1, overlap 763520 763522 CCTAGAGCGGGAGGC GG-CCCGGGTGGAGCGGGG CGGG CCCCCCTTCGCCCTGGTCC TTTTGGACCTGGACG TERM 629 763522 - 763557 + G 71 -14.6 -3.09004 | overlap 763520 763520 TAGAGCGGGAGGCGG CCCGGGTGGAGCGGGG CGGG CCCCCCTTCGCCCTGG TCCTTTTGGACCTGG TTHA0798 762972 - 763922 + | GGDEF domain-containing protein TTHA0799 764986 - 763907 - | prephenate dehydrogenase TTHA0800 766017 - 764983 - | 3-deoxy-7-phosphoheptulonate synthase TERM 630 765907 - 765949 + g 70 -9.6 -3.76232 | overlap 765871 765926 GATGGCCCCCACCAG GGTGGTCTCCACGCCCCGGG AGA CGTGGGGCCGGTAGCCCACC TTCTCTATTTCCCGG TERM 631 766066 - 766035 - R 77 -7 -4.56597 | opp_overlap 766038 766039, overlap 766036 766037 CTTCCCTCCCAAAAA CCTTGGGCGCCCCC TTTA GGGGGCGCCCTTTT CGCGGTATGGCCTAC TERM 632 766039 - 766062 + r 100 -21 -4.13014 | opp_overlap 766037 766036 766035, overlap 766038 CCTCCCAAAAACCTT GGGCGCCCCC TTTA GGGGGCGCCC TTTTCGCGGTATGGC TTHA0801 766931 - 766158 - | hypothetical protein TERM 633 766284 - 766265 - G 71 -9.2 -4.14243 | GAGTGTAGCCCAAAA GCCCCGTG GCCC CAGGGGGC GCCTTGCGCCTTCCC TTHA0802 767467 - 766931 - | hypothetical protein TTHA0803 768348 - 767533 - | hypothetical protein TTHA0804 769463 - 768345 - | radical SAM domain-containing protein TERM 634 769020 - 769059 + g 75 -13.5 -3.50853 | opp_overlap 769012 769011 GGAGAAGTGGTGGAT CTCCGCCGCGGTCCAGG CCTTCA CCTGGACCCCGGGGAAG TTCTCCTTCAGGGCC TTHA0805 770139 - 769474 - | hypothetical protein TTHA0806 770579 - 770139 - | hypothetical protein TTHA0807 771623 - 770589 - | transcriptional regulator TERM 635 771570 - 771609 + g 74 -2.1 -4.67904 | gap 3, overlap 771590 GCTCACGGTGCCGAG GCCCA-CG-CC-CGCCTTGG CCG CCACGTCGTGGATGGTGGGC TTTTTGCGCTTCATC TERM 636 771934 - 771956 + G 85 -9.1 -4.68103 | gap 1, overlap 771937 GGCCGGGGCCTTGCT CGTGGCCGGG CACA CCTGGCC-CG TTTTCTTCCGCTTCA TTHA0808 771716 - 772249 + | hypothetical protein TTHA0809 772259 - 773053 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase TTHA0810 773047 - 773946 + | metallo-beta-lactamase related protein TTHA0811 773980 - 774834 + | phosphoribosylglycinamide formyltransferase (PurD) TTHA0812 774831 - 776084 + | phosphoribosylamine--glycine ligase TTHA0813 777948 - 776074 - | DNA polymerase III epsilon chain-like protein TTHA0814 778307 - 777945 - | putative response regulator TTHA0815 780780 - 778279 - | sensor histidine kinase TERM 637 778412 - 778366 - GR 86 -9.3 -4.56597 | gap 2, overlap 778368 CCCGTCTTCCAAAAA GACCCGCC--CGCCCAGGGCCTC CGA GAGCCTCCGGGCGATGGCGAGGC CCAGGCCCGTCCCCC TERM 638 778410 - 778368 - GR 77 -10.5 -3.90048 | gap 2, overlap 778366 CGTCTTCCAAAAAGA CCCGCC--CGCCCAGGGCCTC CGA GAGCCTCCGGGCGATGGCGAG GCCCAGGCCCGTCCC TERM 639 778819 - 778835 + gr 79 -11.5 -3.78775 | CTCCTGGGCGAGGAG GGCGGTG AAG CGCCGCC TTTCCTCCTCCCCCA TERM 640 779128 - 779163 + gr 81 -11.1 -4.03978 | gap 1, opp_overlap 779091 CCCCAGGGCCCCGGC GAGGAGGGCCTCCGCC CGCTC GGCG-AGGCGCTCCGC TTTATCTGGCCCCTT TERM 641 779521 - 779508 - GR 75 -9.5 -4.08216 | GGATGCCCCCGAAAA GGCCC GCGA GGGCC CCTTCCCGGGTGCTC TERM 642 779857 - 779821 - GR 77 -6.3 -4.57073 | overlap 779831 GACCCCGCCCAAAAA GGCGAGGAAGGCCAGGG CCG CGCCGCCCTCCCGGGCC ACGGCGAGGACGTAG TTHA0816 780953 - 780777 - | hypothetical protein TTHA0817 782707 - 780950 - | CBS domain-containing protein TERM 643 782291 - 782263 - GR 78 -15.9 -3.13403 | overlap 782261 TGGGGTCCACGAAGA CGGGGGGGCGCTG CAC CAGCTCCCCCACG GGCCGGGCGAGGCCC TTHA0818 783032 - 782679 - | hypothetical protein TERM 644 782836 - 782822 - GR 70 -4.2 -4.32034 | overlap 782823 782824 GGAGGAGGACGAAAA GCCG CACCACC CGGC CAAGCCCAGGAGGGG TERM 645 783046 - 783075 + r 70 -13.5 -3.06831 | opp_overlap 783048, overlap 783034 ATGGCCTCAGTTTAA AACCCCATCCCGG CTTC CCGGGATGGGGCC TTCCCTCAGGCTTAG TERM 646 783073 - 783048 - R 100 -20.5 -4.13767 | opp_overlap 783046 783034 GGCCTCAGTTTAAAA CCCCATCCCGG CTTC CCGGGATGGGG CCTTCCCTCAGGCTT TTHA0819 784760 - 783087 - | sodium/solute symporter TTHA0820 785027 - 784770 - | hypothetical protein TERM 647 785136 - 785169 + r 95 -11 -4.54727 | opp_overlap 785138, overlap 785137 785138 GGAGGCGGTCAAGAA AAGCCCCTTTTGCG GCTATG CGCAAAAGGGGCGG TTTTGCTTTCCACAC TERM 648 785137 - 785168 + r 78 -14.5 -3.32354 | opp_overlap 785138, overlap 785136 785138 GAGGCGGTCAAGAAA AGCCCCTTTTGCG GCTATG CGCAAAAGGGGCG GTTTTGCTTTCCACA TERM 649 785167 - 785138 - R 100 -18 -4.63486 | opp_overlap 785138 785137 785136 AGGCGGTCAAGAAAA GCCCCTTTTGCG GCTATG CGCAAAAGGGGC GGTTTTGCTTTCCAC TERM 650 785138 - 785167 + r 85 -18 -2.5893 | opp_overlap 785138, overlap 785137 785136 AGGCGGTCAAGAAAA GCCCCTTTTGCG GCTATG CGCAAAAGGGGC GGTTTTGCTTTCCAC TTHA0821 786051 - 785317 - | hypothetical protein TTHA0822 787567 - 786020 - | potassium efflux transporter TERM 651 786307 - 786350 + gr 85 -14.4 -4.1196 | overlap 786308 786343 GGTCCAGCCTTTCCC AGAGCTCCGGGTCCTCGGCG TCGC CGTAGAGGACCCGGCGCCCC TTTTCCCGGTGCCTT TERM 652 786308 - 786349 + gr 86 -17.9 -3.06694 | overlap 786307 786343 GTCCAGCCTTTCCCA GAGCTCCGGGTCCTCGGCG TCGC CGTAGAGGACCCGGCGCCC CTTTTCCCGGTGCCT TTHA0823 788245 - 787610 - | hypothetical protein TERM 653 788361 - 788306 - R 100 -25.5 -4.57073 | gap 1, overlap 788308 788349 CACCCCCCGGAAAAA GTTCCCGGGGGGCTTCCCCGGGCCAG CCGTT CTGGCCCAAGGA-GCCCCCCGCGACC CCTTGCCGGAGAGGC TERM 654 788359 - 788308 - R 100 -26.7 -2.60032 | gap 1, overlap 788306 788349 CCCCCCGGAAAAAGT TCCCGGGGGGCTTCCCCGGGCCAG CCGTT CTGGCCCAAGGA-GCCCCCCGCGA CCCCTTGCCGGAGAG TTHA0824 789320 - 788376 - | spermidine synthase TTHA0825 789733 - 789332 - | S-adenosylmethionine decarboxylase proenzyme TTHA0826 792379 - 789776 - | cell division protein FtsK TERM 655 789927 - 789910 - G 75 -12.7 -3.64703 | CGTGGCCGATGGAAA GCCGCCT CTGC AGGCGGC TCACCGAGCCGTACC TERM 656 792402 - 792384 - R 71 -13.8 -2.82193 | opp_overlap 792384 ATCAGAGGCATTATA GGGGGGCA GGC CGCCCCCC TATTGGGCCTTGGGC TERM 657 792384 - 792402 + r 70 -13.1 -3.06261 | opp_overlap 792384 ATCAGAGGCATTATA GGGGGGC AGGCC GCCCCCC TATTGGGCCTTGGGC TTHA0827 792911 - 792420 - | outer membrane protein, OmpH-like TTHA0828 793009 - 793455 + | hypothetical protein TERM 658 793472 - 793496 + F 89 -8.6 -5.01546 | gap 1, opp_overlap 793464 793461, overlap 793472 793473 GGAAGAAGGCGTGGC T-TCCCGCCTC CACG GGGGCGGGACA TTTTTCTCTAGATTT TTHA0829 793544 - 794176 + | putative acetoin utilization protein, acetoin dehydrogenase TTHA0830 795803 - 794184 - | hypothetical protein TERM 659 794495 - 794505 + g 71 -8.2 -4.08216 | CCCGGTCCACCCGGT CCCC CAA GGGG TTTTCCAGCCGGTAG TERM 660 795871 - 795892 + H 85 -12.9 -4.07568 | opp_overlap 795867 795872, overlap 795872 CCACGGGAAAAGGGA AGCCCCGGC CTTC GCCGGGGCC TTTTGGCGGAGAGGG TERM 661 795872 - 795891 + H 79 -16.4 -3.04398 | opp_overlap 795872 795867, overlap 795871 CACGGGAAAAGGGAA GCCCCGGC CTTC GCCGGGGC CTTTTGGCGGAGAGG TERM 662 795891 - 795872 - H 85 -16.4 -3.37537 | opp_overlap 795871 795872, overlap 795867 CACGGGAAAAGGGAA GCCCCGGC CTTC GCCGGGGC CTTTTGGCGGAGAGG TERM 663 796107 - 796073 - gH 71 -6.2 -4.25104 | opp_overlap 796028 796106 GGCGGCCCACGAAAA CCTGGACTTTGACGCC CTG GGCTCCATGGTCCTGG CGGGGCGGCTTTACC TERM 664 796889 - 796917 + GH 82 -11.6 -4.08216 | GGCCTTCGCCCGGGT GCGGGGCAAGGG GCGGG CCCTGGCCCGGC TTTTGGAAACCCTGG TERM 665 797366 - 797376 + GH 77 -4.6 -4.63527 | GGTCCTAAAAGCCCT TCCC AGC GGGG TTTTTCGGGTGGTGG TERM 666 797739 - 797750 + GH 79 -7.2 -4.57569 | opp_overlap 797713, overlap 797713 ATGGCCGTGGACCTG GGCG GCCT CGCC TTTTTGGACCCCTAC TERM 667 798245 - 798278 + GH 72 -13.1 -3.16668 | gap 1, opp_overlap 798248 GGAGGAGGTGCCCAA GGAGGCCTTGGGGCGG GAG CC-CCTCAGGGCCGCC TTCCTCGCCCTCTTC TTHA0831 796047 - 798503 + | polyA polymerase family protein TERM 668 798580 - 798618 + GF 70 -10.2 -3.63694 | gap 1 TTCCAGGCCTGGCTC GCCG-ACCGCTACGGGG AGGTGG CCCCAAGGCGGTACGGC TTCTTGCGCCTGGAT TTHA0832 798478 - 799083 + | hypothetical protein TERM 669 799290 - 799308 + G 81 -12.4 -3.96327 | CTCGTGGGCTTCGGC TGGGCGCG CCC CGTGCCCA TTTATCCTCCCGCCT TTHA0833 799080 - 799739 + | hypothetical protein TERM 670 799805 - 799832 + T 87 -18.4 -2.71364 | opp_overlap 799797 AAGCTAATTTGGGGC CCCCACCGCGGC GAAA GCCGCGGTGGGA TACTTAGGGGCCTCC TTHA0834 800688 - 799876 - | endonuclease IV TERM 671 800647 - 800600 - G 90 -17 -3.6106 | gap 2, opp_overlap 800601 800602, overlap 800601 GCGAAGATCTGGAAA GCGGTGAGGCCGAGGGCGGTGG CTTCCT CCACCGCCC-CGGCCACGCC-C TTTTTCCCGGCGATG TERM 672 800601 - 800647 + g 100 -19.4 -4.57073 | gap 1, opp_overlap 800600 800601, overlap 800602 CGAAGATCTGGAAAG CGGTGAGGCCGAGGGCGGTGG CTTCCT CCACCGCCC-CGGCCACGCCC TTTTTCCCGGCGATG TERM 673 800647 - 800601 - G 76 -17.2 -2.76315 | gap 1, opp_overlap 800601 800602, overlap 800600 CGAAGATCTGGAAAG CGGTGAGGCCGAGGGCGGTGG CTTCCT CCACCGCCC-CGGCCACGCCC TTTTTCCCGGCGATG TERM 674 800602 - 800646 + g 100 -22.9 -3.33922 | gap 1, opp_overlap 800600 800601, overlap 800601 GAAGATCTGGAAAGC GGTGAGGCCGAGGGCGGTGG CTTCCT CCACCGCCC-CGGCCACGCC CTTTTTCCCGGCGAT TTHA0835 801466 - 800714 - | hypothetical protein TTHA0836 802124 - 801468 - | rhodanese-like domain-containing protein TERM 675 802150 - 802177 + r 100 -24.2 -2.53263 | overlap 802157 CTTGGGGTCTGGGCG GCCCACCCCGGC CCAG GCCGGGGTGGGC TCGCTTAGGCCTGCA TTHA0837 803618 - 802182 - | metallo-beta-lactamase family protein TTHA0838 803788 - 804477 + | glutaredoxin-like protein TTHA0839 804479 - 804892 + | phage shock protein E TERM 676 804952 - 804982 + G 74 -4.5 -4.56597 | gap 1, overlap 804948 GTGCAGGTGGCCTTG GC-CCTCCTCGCCC TGGT GGGGGTGGCGGAGC TTTTTGCCCGCCGGG TERM 677 805018 - 805033 + G 78 -2.4 -4.8543 | overlap 805019 CGGAGGCTTTCCTCC TGGGGC CAGG GCGCCG TTTTTGTGGGCCTTC TTHA0840 804892 - 805683 + | thiol:disulfide interchange protein TTHA0841 807050 - 805680 - | stage V sporulation protein R (SpoVR) related protein TERM 678 806411 - 806394 - G 74 -4.7 -4.56597 | overlap 806395 GTGGCGGGCCAAAAA GCCCAGG ATGT CCCGGGT GGGCCTCGGGGGGAG TTHA0842 808107 - 807052 - | hypothetical protein TTHA0843 810115 - 808109 - | serine protein kinase TTHA0844 810775 - 810227 - | CAAX amino terminal protease family protein TERM 679 810433 - 810403 - G 71 -14.7 -3.04792 | gap 1, overlap 810406 GGAGGAGGGCGAAGA GGAGGGCCTGGGCC AGGA GGCCAAGGCCC-CC GAGCCACGCCACGAG TERM 680 810431 - 810406 - G 72 -16.1 -2.74523 | overlap 810403 GGAGGGCGAAGAGGA GGGCCTGGGCC AGGA GGCCAAGGCCC CCGAGCCACGCCACG TERM 681 810536 - 810522 - G 95 -12.8 -4.4648 | AGGGCGAGGAGAAAA GGGGGC CTT GCCCCC GAGCGCCTAAGGGCC TERM 682 810694 - 810662 - G 95 -16.2 -4.25074 | GACCAAAGCCCAAAA CCCCGCCCCGCCCG CTTCC CGGGCGAGGGGGAG GCCAAGCCAGAGCAT TTHA0845 811050 - 810772 - | AsnC family transcriptional regulator TTHA0846 811793 - 811047 - | metallo-beta-lactamase family protein TTHA0847 812495 - 811809 - | putative phosphohydrolase recX 812513 - 812941 + | recombination regulator RecX TTHA0849 812945 - 813388 + | hypothetical protein TTHA0850 813471 - 813743 + | stage V sporulation protein S (SpoVS) related protein TERM 683 813767 - 813812 + G 75 -14.6 -3.40403 | ACGCCTCGAGCCCTG GCGGTGGCCGTCCTCCTCGA GGTGGA TCGGGGAGGGCGGGCCCAGC TTCTCCTGGACCGCG TTHA0851 813740 - 814936 + | Sun protein (RNA methyltransferase) TTHA0852 814933 - 815718 + | pyrroline-5-carboxylate reductase TTHA0853 815771 - 816352 + | hypothetical protein TTHA0854 816968 - 816339 - | glycosyltransferase TTHA0855 817980 - 816970 - | membrane-associated Zn-dependent protease TERM 684 817735 - 817759 + g 95 -15.7 -4.25104 | opp_overlap 817735 GAGCTTCCCCAGGAA GGGGAGGGCGT CGT ACCCCCTCCCC TTTTCCTCGGGGAGG TERM 685 817759 - 817735 - G 76 -15.7 -3.14344 | opp_overlap 817735 GAGCTTCCCCAGGAA GGGGAGGGCGT CGT ACCCCCTCCCC TTTTCCTCGGGGAGG TTHA0856 819080 - 817977 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 686 818157 - 818121 - G 73 -15 -3.14132 | TTTCCCCTGGAGGAA GGCCTCCACCGCCACC TCGTC GGCGGCGGAGACGGCC ACCTGGGCCAAGCCC TERM 687 818759 - 818717 - G 73 -6.9 -4.36914 | gap 2, opp_overlap 818727, overlap 818719 818720 CCTCCCGCCACAAAA GAGGCCCCGCCGCCACCATGG CCT CCTTGTTGGCGA-GGG-CCAC CCGCTTCCCGGTCCG TTHA0857 819901 - 819077 - | phosphatidate cytidylyltransferase TERM 688 819727 - 819706 - G 95 -13.7 -4.45399 | opp_overlap 819708 AGAGGAAGACCAAAA CCCCTCCCG CGAG CAGGAGGGG GGTGTTGAGGGCGAT TTHA0858 820498 - 819941 - | ribosome recycling factor (Rrf) TTHA0859 821212 - 820511 - | uridylate kinase TERM 689 820711 - 820736 + g 70 -4.5 -4.41633 | CGGGGTTCTTGCGCG GGTCGTCGGAG TAGA CCCCGTCCACC TTGTTTTTGGCCATG TERM 690 821254 - 821227 - R 100 -16.3 -4.18018 | gap 1, opp_overlap 821221, overlap 821242 TGGCTTCATGGAAAA CCGGGGCCCCGG AAACG CCGG-GCCCCGG TGCGCCTTCATGGCT tsf 821859 - 821269 - | elongation factor Ts rpsB 822626 - 821856 - | 30S ribosomal protein S2 TTHA0862 824221 - 822923 - | 4-aminobutyrate aminotransferase TERM 691 823453 - 823427 - G 79 -7.8 -4.59773 | opp_overlap 823448, overlap 823429 TTCCAGGGCGAAAAA CCGACCCGTGCG CCC CGCCCCGGTCTG GACCTCGTCGGCCAC TERM 692 824104 - 824093 - G 79 -7.2 -4.57073 | overlap 824094 CACGTCTTCTAAAAA GGCC CCCT GGCC CCTTGCGGGCACGAA TTHA0863 824887 - 824339 - | MutT/nudix family protein TTHA0864 825270 - 824884 - | hypothetical protein TERM 693 824967 - 824977 + g 74 -2.4 -4.62069 | TGACCACCCCGATGG CCGC GAG GGGG TTTTTGAACTGGGAG TTHA0865 825332 - 826879 + | NAD-dependent aldehyde dehydrogenase TERM 694 828034 - 828010 - g 87 -15.7 -3.60971 | opp_overlap 827993 828027 ACTTTAACCCCCAAA CCCCCGCCC TGGCCAC GGGCGGGGG GGAGGGTCGGGTCCT TTHA0866 826917 - 828068 + | hypothetical protein TERM 695 828139 - 828171 + T 73 -14.2 -3.13403 | gap 1, opp_overlap 828127, overlap 828137 828141 GAACCTTGCGCCAGG GC-CCCCATGCTGGC GCAA GCCAGCATGGGGTGG TATTACTGGCCCGCC TERM 696 828141 - 828168 + T 100 -21.4 -2.77523 | opp_overlap 828127, overlap 828139 828137 ACCTTGCGCCAGGGC CCCCATGCTGGC GCAA GCCAGCATGGGG TGGTATTACTGGCCC TTHA0867 828482 - 828174 - | hypothetical protein TTHA0868 829032 - 828664 - | chorismate mutase TERM 697 829282 - 829308 + G 83 -7.8 -4.66833 | CACGGGGCCTACGTG GCGGGGCTCATC GGG GCCGAGCACCGC TTTTTGCCCTTCCAG TERM 698 829536 - 829492 - g 75 -13.5 -3.57144 | opp_overlap 829503, overlap 829493 TGCCGCATCCCCAAA CTCGTGGGAGAGGCCCACAGG AAG CCCGTGCGCCTCTTCCACTAC CCCCGGGAGGACCTC TERM 699 829535 - 829493 - g 76 -17 -2.74144 | opp_overlap 829503, overlap 829492 GCCGCATCCCCAAAC TCGTGGGAGAGGCCCACAGG AAG CCCGTGCGCCTCTTCCACTA CCCCCGGGAGGACCT TTHA0869 829057 - 829767 + | LmbE-related protein TTHA0870 830214 - 829777 - | hypothetical protein TTHA0871 830936 - 830118 - | hypothetical protein TTHA0872 832045 - 830936 - | amidohydrolase family protein TTHA0873 832808 - 832026 - | hypothetical protein TTHA0874 833890 - 832781 - | N-acylamino acid racemase TTHA0875 835146 - 833881 - | seryl-tRNA synthetase TERM 700 835005 - 835021 + g 74 -2.1 -4.63527 | overlap 835007 GGTTGCGCTCGGTCT GGACCTC CTG GAGGCGC TTTTTCAGCTCCTGG gatC 835427 - 835149 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 701 835326 - 835349 + g 73 -14.6 -3.14564 | GTCCAGGATCCGCTT GAGGTCCTGC AAAA GCAGGGCCTC TTCCTCGGGGGATAG TTHA0877 836172 - 835429 - | hypothetical protein TTHA0879 837937 - 836744 - | putative oligosaccharide deacetylase TTHA0878 836194 - 836847 + | hypothetical protein TERM 702 836861 - 836871 + gT 76 -8.2 -4.19238 | overlap 836853 GAGGTAGGCCATCCG GGCC GGG GGCC TTTTCCGCTTGGGGA TERM 703 836987 - 836951 - GT 73 -13 -3.29043 | gap 1 AAGCCTCGGCCAGAA GGGGAGG-TCTTGGGTC TTTA GGCCCAGGATCCTCCCC CCGTCCGCCAGGTAG TERM 704 837227 - 837215 - GT 74 -10.5 -3.76413 | opp_overlap 837222 CCGGAAAAGGTCAAA GGGGC CAA GCCCC GCCCGGGCCACCCGG TERM 705 837712 - 837724 + gT 79 -6.9 -4.58395 | overlap 837709 CCTCCACCAGGTCCG GCCTG GCC CGGGC TTTTTCCCCGGTGAG TTHA0880 839109 - 837937 - | multidrug resistance protein-related protein TERM 706 838073 - 838021 - G 70 -9.6 -3.86346 | gap 1, overlap 838022 CGAGCCCGCGAGAAA GGGCGCCCGGAGGCCGAAGGCCTCC CACA AGAGCCCGCCCGCCACCGGGC-CCA GGGCGAGGCCGAGCC TERM 707 838131 - 838141 + g 77 -6.8 -4.56597 | TGGCGGCCCGGTTCT CCTG GGG CAGG TTTTTGGCCAGAAGC TERM 708 838374 - 838345 - G 73 -14.9 -3.23216 | GGGGAGGAGGAGGAA GGCCGCCCCGCCC CCCA GGACGAGGAGGCC CCCCAGGGCCAGGGG TERM 709 839031 - 838996 - G 74 -9.5 -4.07568 | overlap 839017 CTCCGGGGCGTAAAA GGGGAGCAGCCCGGC GAAGTA GCCGCTCCGCACCCC CTCCAGGAGGCCCAC TTHA0882 840957 - 839746 - | glycosyltransferase TTHA0881 839124 - 839807 + | glycosyltransferase TTHA0883 841486 - 840968 - | transposase TTHA0884 842001 - 841486 - | transposase TTHA0885 842898 - 842026 - | rhamnosyl transferase TTHA0886 844009 - 842891 - | UDP-galactopyranose mutase TTHA0887 845055 - 844006 - | glycosyltransferase TTHA0888 845630 - 845052 - | pyrrolidone carboxyl peptidase TERM 710 846052 - 846023 - g 76 -3.5 -4.72272 | opp_overlap 846014, overlap 846025 GCCCTGGAGGAAAAA GCCCTCTTCGT CCTCTCCT ACGAGGAGGCC CTAAGCCCCTTCCCC TERM 711 848710 - 848698 - g 73 -10.5 -3.78934 | CCGCCTGGAGAAGAA GGGCC TGA GGCCC CGGGACTACCCCGAG TTHA0889 845828 - 848764 + | transcription-repair coupling factor TTHA0890 848967 - 851258 + | putative 3-hydroxyacyl-CoA dehydrogenase TTHA0891 851269 - 852462 + | acetyl-CoA acetyltransferase TERM 712 853445 - 853464 + G 77 -10.7 -4.07568 | CGTCTACCGCACCGT GGGCCTC ATTGAC GAGGCCC TTTTGGGCAAGAAGG TERM 713 853516 - 853554 + G 70 -13.1 -3.33492 | opp_overlap 853538 GCATTGAGGAGTACG CCGTGGAGGCCAGCATC ATCAA GGTGCTGGGCTCCGAGG TTCTGGACTACGTGG TTHA0892 852474 - 854207 + | acyl-CoA dehydrogenase TERM 714 854227 - 854261 + T 89 -17.1 -3.57144 | overlap 854229 854230 AGCGTGGGGTGATCT TACCCCCCGTGCGGG CTTGC CCCGCACGGGGGCTC TTTAGCGCTCCAGGC TERM 715 854229 - 854259 + T 100 -19.7 -3.36515 | overlap 854227 854230 CGTGGGGTGATCTTA CCCCCCGTGCGGG CTTGC CCCGCACGGGGGC TCTTTAGCGCTCCAG TERM 716 854230 - 854258 + T 100 -23.2 -2.61695 | overlap 854229 854227 GTGGGGTGATCTTAC CCCCCGTGCGGG CTTGC CCCGCACGGGGG CTCTTTAGCGCTCCA cysS 855705 - 854263 - | cysteinyl-tRNA synthetase TERM 717 855967 - 855917 - g 71 -14.7 -3.01791 | gap 1, opp_overlap 855957 AGCTCCTCCTCAAGA CCCCCAAGGAGCGGATCACCCTCC GCGT GGAGGG-GACGGGGCCCTTGGGGG GGCTTGTGGTAGAGG TTHA0894 855742 - 856767 + | chaperonin HSP33 TTHA0895 856846 - 857259 + | universal stress protein TTHA0896 857440 - 858126 + | Zn-dependent protease TTHA0897 858127 - 858375 + | hypothetical protein TTHA0898 858748 - 858422 - | hypothetical protein TTHA0899 861764 - 858738 - | chromosome segregation SMC protein TERM 718 858894 - 858882 - G 80 -6.2 -4.62069 | overlap 858861 CCCCGAGCGCAAAAA GCGC GTGAA GCGC AGGAGGTTCGCCTCG TERM 719 859430 - 859485 + g 71 -8.9 -4.09685 | gap 3 CCACCTCTTCCCAGG CCGCCTCC-CGCCGGGCCAGGGTGAGGC GGA GGTGCTCCC--GCTCGGCGAGGAGGTGG TTTTGCCGGGTGAGG TTHA0900 862258 - 861761 - | hypothetical protein TTHA0901 863409 - 862255 - | hypothetical protein TERM 720 862494 - 862535 + g 72 -12.4 -3.53012 | gap 3, opp_overlap 862494, overlap 862463 CGTAGGCCCGAAGGA GCCTCGCCCGTTCCTCGG-GA AGG TCGCCGAGG--CGGGGGAGGC TTTGGGCGAGGGGGC smpB 863840 - 863406 - | SsrA-binding protein TTHA0903 864444 - 863842 - | hydrolase TERM 721 864097 - 864078 - G 77 -10.6 -4.12188 | CGAGGACCTCCAAAA GCCCGGCG TACT CCCCGGGC CAGGCCGCCCCCACG TERM 722 864496 - 864447 - R 100 -14.8 -4.30576 | gap 1, opp_overlap 864418 864490, overlap 864448 CGGGGAGGAGCAAAA GCCCCGCCCCCCGCTCCCGGGCC TCTTG GGCCAGGG-GCGGAGGGCCTGGA GGAGCTCCCTTAGGC TERM 723 864495 - 864448 - R 86 -18.3 -3.18024 | gap 1, opp_overlap 864418 864490, overlap 864447 GGGGAGGAGCAAAAG CCCCGCCCCCCGCTCCCGGGCC TCTTG GGCCAGGG-GCGGAGGGCCTGG AGGAGCTCCCTTAGG TTHA0904 865120 - 864548 - | biotin biosynthesis protein BioY TTHA0905 865265 - 866260 + | glyceraldehyde 3-phosphate dehydrogenase (GAPDH) TERM 724 867409 - 867397 - g 71 -9.1 -4.08216 | GGAGTTCCTGGAAAA GGGCA CCC TGCCC GGCCTCGAGGTCCTG pgk 866261 - 867433 + | phosphoglycerate kinase TERM 725 867479 - 867451 - f 71 -12.5 -3.28712 | gap 1, opp_overlap 867452, overlap 867452 CGCGGGCGTTTAGAA TGGGCCTGGGGC GTGGAG GCCCCAGGCC-A TGGCTTACGGCAAGG TERM 726 867666 - 867644 - g 73 -14.8 -3.14132 | GCCTTCCGGGAGGAA GAGGGGGCCC TGC GGGCCCTCTC CCGGGCCGAGCGCCG TTHA0907 867479 - 867766 + | ribosome-binding factor A TTHA0908 867745 - 868143 + | thioesterase TTHA0909 868153 - 869397 + | ornithine aminotransferase TERM 727 869386 - 869373 - f 80 -9.5 -4.19704 | opp_overlap 869373 CAAGGCTACGGAAAA GGCCC TCGA GGGCC TTCTAGGTTGAAATG TTHA0910 869399 - 871633 + | exoribonuclease TERM 728 871642 - 871621 - T 70 -3.6 -4.56597 | gap 1 CCGGGCCCGCAAAAA GCGG-CGCC GCTAA GGCTTCCGC AAGCCCCTGGGGGGG TERM 729 871659 - 871694 + T 77 -15.5 -3.01712 | gap 1 AGCCCCTGGGGGGGC TGGCAGCGCTCCAGGC CCAGC GCCTGGAG-GCTGCCC TCTTGGGACGGGGGC TERM 730 871704 - 871720 + T 100 -15.1 -4.48987 | CTGCCCTCTTGGGAC GGGGGCG CTG CGCCCCC TTTTACTTCTGGCGG TTHA0911 872395 - 871811 - | hypothetical protein TTHA0912 871959 - 871870 - | hypothetical protein TTHA0913 872255 - 871956 - | hypothetical protein TTHA0914 872178 - 872047 - | hypothetical protein TTHA0915 872405 - 872295 - | hypothetical protein TTHA0916 872632 - 872456 - | hypothetical protein TTHA0917 872838 - 872539 - | hypothetical protein TTHA0918 872912 - 872685 - | hypothetical protein TTHA0919 872971 - 872852 - | hypothetical protein TTHA0920 873135 - 872983 - | hypothetical protein TTHA0921 874164 - 873211 - | transposase ( DNA-binding protein 1A) TTHA0922 874403 - 874281 - | hypothetical protein TTHA0923 874670 - 874437 - | hypothetical protein TERM 731 874896 - 874867 - R 100 -12 -4.36914 | opp_overlap 874873, overlap 874868 874869 GGCGCTCCCAGAAAA GGGGCCCGGGCG GTTCGG CGCCCGGGCCTT CGCGTCGTTCCAAAT TERM 732 874895 - 874868 - R 80 -15.5 -3.21934 | opp_overlap 874873, overlap 874867 874869 GCGCTCCCAGAAAAG GGGCCCGGGCG GTTCGG CGCCCGGGCCT TCGCGTCGTTCCAAA TERM 733 874894 - 874869 - R 87 -19 -2.52946 | opp_overlap 874873, overlap 874868 874867 CGCTCCCAGAAAAGG GGCCCGGGCG GTTCGG CGCCCGGGCC TTCGCGTCGTTCCAA TTHA0924 875902 - 874922 - | hypothetical protein TERM 734 875938 - 875920 - R 72 -5.8 -4.33274 | opp_overlap 875924, overlap 875921 GGGAGAGGAGGAAAA GCCCGCCC TCG GTGAGGGC CAGGGGCTTCTCGTA TTHA0925 877283 - 875988 - | poly(A) polymerase family protein TTHA0926 877284 - 877895 + | dephospho-CoA kinase (dephosphocoenzyme A kinase) TTHA0927 878367 - 877864 - | hypothetical protein TERM 735 878498 - 878515 + H 78 -14.1 -3.62054 | opp_overlap 878496, overlap 878496 TCTCCCCGACCAAGG GCCGGCC CACG GGCCGGC TTCCTTCTTTCGGGT TTHA0928 878529 - 879086 + | methyltransferase TTHA0929 879087 - 879569 + | phosphopantetheine adenylyltransferase TTHA0930 879571 - 881070 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 736 881100 - 881127 + T 84 -14.1 -3.90112 | GTTGTTTTGCCGGGG CCCCATGCCGG CGCAGA CCGGCACGGGG TTTACTTCCCCACGC trmE 882427 - 881129 - | tRNA modification GTPase TrmE TTHA0932 882636 - 882424 - | hypothetical protein TTHA0933 882856 - 882626 - | hypothetical protein TTHA0934 884132 - 882858 - | glutamate-1-semialdehyde 2,1-aminomutase (GSA) (glutamate-1-semialdehyde aminotransferase) (GSA-AT) TERM 737 884291 - 884309 + G 70 -4.5 -4.45544 | gap 1, overlap 884282 884291 GAGCCTCGTGGTGGT GG-GGGGC TACG GCCTCGCC TTTTACTTCCTAAGC TERM 738 884369 - 884408 + G 89 -5.5 -5.06414 | overlap 884394 GGCCTACGCCGTCTG GGCCGGGGTGGGGACGG CGGCCA TCGCCCTCATCGGGGCC TTTTTCTTCGGGGAG TTHA0935 884181 - 884498 + | quaternary ammonium compound-resistance protein TTHA0936 885130 - 884495 - | CBS domain-containing protein TTHA0937 885821 - 885285 - | hypothetical protein TTHA0938 886814 - 885834 - | pyruvate dehydrogenase E1 component, beta subunit TERM 739 886759 - 886745 - G 70 -4.2 -4.4261 | CCCCGAAGACCAAAA CCCG CTCGTCC CGGG AAAGGGCCAGGTCCA TTHA0939 887854 - 886814 - | pyruvate dehydrogenase (lipoamide) E1-alpha chain TERM 740 887780 - 887759 - GR 100 -10.1 -5.00616 | gap 1, opp_overlap 887775 CTTCTCGTCAAAAAA CCGGGCC-CG GCG CATGGCCCGG TAGAGCCTCAGGGCT TTHA0940 888968 - 887823 - | aminotransferase TTHA0941 889900 - 888989 - | ABC transporter ATP-binding protein TTHA0942 890661 - 889900 - | hypothetical protein TTHA0943 891422 - 890667 - | hypothetical protein TTHA0944 892633 - 891674 - | hypothetical protein TTHA0945 893096 - 892725 - | hypothetical protein TERM 741 892980 - 892994 + g 72 -11.4 -3.64283 | opp_overlap 892943 CTCCCCCAGGCGCTC GGCCTC TGG GAGGCC TTCTTGGGGAGTTTG TTHA0946 893137 - 893280 + | hypothetical protein TTHA0947 894029 - 893277 - | triosephosphate isomerase TERM 742 893483 - 893502 + g 72 -3.4 -4.59773 | CCTGGTGCATGGCCT CGGCGTCC TCGG GGGTGGCG TTTTTGCCCGTGCCG TTHA0948 895075 - 894038 - | fatty acid desaturase TTHA0949 895607 - 895149 - | D-tyrosyl-tRNA deacylase TTHA0950 896435 - 895611 - | DegV family protein TERM 743 895739 - 895749 + g 71 -8.2 -4.11216 | overlap 895726 895725 CGCCCAGGGCCTTGG CCCC CTC GGGG TTTTCCGCGTGGGCC TTHA0951 897279 - 896437 - | DegV family protein TERM 744 896629 - 896662 + g 100 -8.1 -5.40072 | CCGGCCCTCCGCCCA GGCCCGGAAGG CCTTGAGGATCT CCTCCCGGGCC TTTTTTTCCCCCCGG TERM 745 897624 - 897587 - g 70 -13.3 -3.28712 | GGTTGGGGTGGACAA CGTGGACCTCGAGGCGG CAAG CCGCCTCGGGATCCTGG TGGTGAACGTCCCCG TERM 746 898106 - 898062 - g 84 -19.3 -2.78384 | opp_overlap 898067 898076, overlap 898070 CGGGGCGGGATCATA GACGAGAAGGCCCTCCTCGAG GTC CTGGAGGAGGGCCACCTCTTC GCCGTGGGCCTGGAC TERM 747 898098 - 898070 - g 93 -18.9 -3.50492 | opp_overlap 898067 898076, overlap 898062 GATCATAGACGAGAA GGCCCTCCTCGAG GTC CTGGAGGAGGGCC ACCTCTTCGCCGTGG TTHA0952 897366 - 898931 + | D-3-phosphoglycerate dehydrogenase TTHA0953 899050 - 899484 + | hypothetical protein TTHA0954 899631 - 900806 + | mannosyl-3-phosphoglycerate synthase TERM 748 901002 - 900979 - g 90 -16 -4.09685 | CTTCATCGTGGAAAA CGGGGGAGGC CTCT ACCTCCCCCG CGACTGGCCCGTGCG TERM 749 901354 - 901333 - g 70 -12.9 -3.29461 | CAAGGGGGCGGACAA GGGCCGGGC GGCG GCCCGGCTC AGGGCCCTGTGGCCC TTHA0955 900803 - 901582 + | mannosyl-3-phosphoglycerate phosphatase TTHA0956 903050 - 901554 - | hypothetical protein TERM 750 902968 - 903005 + g 81 -2.7 -4.96848 | opp_overlap 902948, overlap 902969 CCTAAGGGATGCGGG GGCGGGAGGTTTTGT GCGAAAAG ACAAACTCTTCCGCG TTTTTGTCTAAGCCG TERM 751 903855 - 903838 - g 70 -2.6 -4.57569 | CCATCCCCTTAAAAA CCGTCC TCTCCT GGATGG GGCTACTGGAAAAGG TERM 752 903901 - 903869 - g 82 -13.3 -4.13767 | GGGGCTACTGGAAAA GGAGTGGCGGCCCCC CTT GGGCCCCACCACCCC GGAGGTGGAGGAGAG TTHA0957 903075 - 903974 + | dihydrodipicolinate synthase TTHA0958 903971 - 904711 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase TERM 753 905868 - 905893 + G 71 -6.1 -4.25104 | opp_overlap 905880 GGGGGAGGACCTCTC CCGGGGGAA CTACCTCC TTCCCACGG TTTTCGTGGGGGAGA TTHA0959 904708 - 906255 + | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseiheyensis HTE831]' TTHA0960 906268 - 907713 + | 4-hydroxyphenylacetate-3-hydroxylase TTHA0961 907710 - 908159 + | hypothetical protein TTHA0962 908147 - 909106 + | homoprotocatechuate 2,3-dioxygenase TERM 754 909236 - 909257 + GF 86 -9.3 -4.60889 | CGCGGCCCTGGCCAC CTACGCCCG CACC CGGGCGGGG TTTTTGCAGGTCCTT TTHA0963 909204 - 909737 + | ABC tranpsorter ATP binding protein related protein TTHA0964 909629 - 909907 + | ABC tranpsorter ATP binding protein related protein TTHA0965 909904 - 910314 + | phenylacetic acid degradation protein PaaI TERM 755 910595 - 910582 - gf 78 -2.3 -4.8048 | overlap 910583 GGGCTACACCAAAAA CGACC TCAA GGTCT TCGCCGAGGTGGTGG TERM 756 910689 - 910716 + GF 81 -14.8 -3.57263 | GCCTCTTCACCGGGG GCCTCGGCCTCC ACGG GGGGGCGGAGGC TTTGGGGATGACGGT TTHA0966 910259 - 911605 + | phenylacetyl-CoA ligase TERM 757 911786 - 911759 - g 72 -15.6 -2.73875 | overlap 911756 CCGGGCGCAAGATCA TCCTCCCCTTCC TGGA GGAGGGGGAGGA GGGGATCGGGAGCTA TERM 758 912055 - 912003 - g 76 -17 -2.72344 | gap 2, opp_overlap 912035 CCGGAGGCTCAAGGA GCGGTGGGAGGCGGAGCGGTCGCCCT CGT AGGGGGACC-CCCCGCCT-CCTCGGC GTGCGTCCCTCTGTC TTHA0967 911608 - 912033 + | hypothetical protein TTHA0968 914082 - 912076 - | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase TERM 759 912826 - 912796 - G 71 -6.6 -4.21194 | overlap 912797 GGCCAGGAGGTAAAA GCGCGCCTCCTCGG GGT CGGAGGTGGCGAGG GTGGCCACGAGGCTT TERM 760 913040 - 913050 + g 70 -2.4 -4.59773 | overlap 913035 CCCGCCTCCAGGAGG GCCG CCA CCGC TTTTTCCACCTCCGC TTHA0969 914609 - 914097 - | phenylacetic acid degradation protein PaaD TERM 761 914191 - 914223 + gr 70 -13.3 -3.01924 | opp_overlap 914162 914163 GGGTTCTTGAGGACC ACCTCCCGGCTTCCG CAC CGGGGGCAGGGAGGG TCTTCCCCGGCCATG TTHA0970 915292 - 914546 - | phenylacetic acid degradation protein PaaC TTHA0971 915806 - 915285 - | phenylacetic acid degradation protein PaaB TERM 762 915570 - 915597 + g 73 -14.2 -3.35046 | gap 1, overlap 915568 GTAGGCCTCTTCTTC CCCCAGGGGCCCT TCC AGGGCCT-TGGGG TCTTTCAGGGCCTCC TTHA0972 916787 - 915816 - | phenylacetate-CoA oxygenase subunit PaaA TTHA0973 917385 - 916774 - | TetR family transcriptional regulator TTHA0974 918432 - 917491 - | integrase/recombinase TERM 763 918515 - 918477 - R 70 -6.5 -4.25104 | opp_overlap 918487 GGGGCCGGAGGAAAA TCCGCCCTCAGGCGAGG GCCTT CCCCGTCTTTGGGTGGA AGAGGCGGACCCGGC TTHA0975 919530 - 918484 - | sugar ABC transporter, ATP-binding protein TTHA0976 920337 - 919540 - | sugar ABC transporter, permease protein TTHA0977 921179 - 920334 - | sugar ABC transporter, permease protein TERM 764 920510 - 920463 - G 79 -16.2 -3.40403 | GTCGGCGTACCAGAA GTAGGCCTCCCCCGCCAGCACC GGCA GGTTCCGGCCGGAGAGGGCCAC CACCACGGCGAAGAC TTHA0978 922438 - 921176 - | hypothetical protein TERM 765 922077 - 922046 - G 77 -14.5 -3.54741 | gap 2, opp_overlap 922063 922066, overlap 922048 GAGGAGCTTGGGAAA GAGGTACCGGGCCCG CTCC CGGGCCCGGT-CC-C GGTCCGGGTCCTTCT TERM 766 922077 - 922048 - G 91 -20.7 -3.35046 | opp_overlap 922063 922066, overlap 922046 GGAGCTTGGGAAAGA GGTACCGGGCCCG CTCC CGGGCCCGGTCCC GGTCCGGGTCCTTCT TERM 767 922066 - 922088 + g 70 -12.6 -3.41051 | opp_overlap 922046 922048, overlap 922063 ACCGGGCCCGCTCCC GGGCCCGGTC CCG GTCCGGGTCC TTCTCGTAGAGGTAG TTHA0979 923746 - 922451 - | hypothetical protein TERM 768 923834 - 923807 - R 100 -19.2 -3.77832 | gap 1, opp_overlap 923800 923829 CGGGAAAGTGAAGAA GCGGGCCCCGGGA GCC TCCCGGGG-CCGC CCCTAGCGGTCTTTA TTHA0980 924938 - 923847 - | hypothetical protein TTHA0981 925048 - 925371 + | hypothetical protein TTHA0982 925777 - 925373 - | bacterioferritin TTHA0983 927346 - 925865 - | L-aspartate oxidase TERM 769 927082 - 927115 + g 73 -15.3 -3.14132 | gap 1 GCCTCTCCAGGTGGC GGGG-GGCCTCCTCCA GGA TGGAGCGGGCCACCCC TTCCTCCACGAGGCC TTHA0984 928278 - 927346 - | quinolinate synthetase TTHA0985 929191 - 928331 - | nicotinate-nucleotide pyrophosphorylase [carboxylating] TERM 770 928473 - 928520 + g 70 -13.3 -3.28924 | gap 1 GCCTCCAGGGGAACC CTTCCCCCCACGCGGCGCACCG CCTCC CGGAGGGCCTCGAGGGGG-AAG TTGTCCAGGAGGATG TERM 771 929130 - 929092 - G 70 -4.5 -4.3534 | gap 1 CCGGAACCACCAAAA GGC-TCGTGAGGTCCC CCTGCCCC AGGTCCTCCCGAAGCC AGGCCCTCAGGGCCT TERM 772 929783 - 929738 - g 84 -10.3 -4.18018 | gap 1, overlap 929739 929781 GGGCCCTATGGAAAA GCCTCAGCC-CGCCCCCGGG CCCCCTT CCCGAGGGCGCGGAAGAGGA GGCCCTGGACCACCT TERM 773 930598 - 930648 + G 76 -3.9 -4.61231 | gap 1, overlap 930599 CACACCTGGCGGGGG AGCCTGGG-GGAGGAGGCCT ACCTCTCGGACC AGGCCTTCGCCGCCCTGGCC TTTTTGGAGCTCTAC TERM 774 930783 - 930739 - g 75 -16.3 -3.05463 | overlap 930768 AGGCTCTTTAGGGAA GGCCCTTCCCTCCCCCTCCCC GCC AAGGAGGTGGAGGAGGGGGCC CTCCCCTCGGGGGAA TTHA0986 929242 - 931170 + | hypothetical protein TTHA0987 931282 - 932487 + | beta-ketoadipyl CoA thiolase TTHA0988 934037 - 932553 - | hypothetical protein TERM 775 932812 - 932765 - G 82 -13.2 -4.07568 | CCTCCGGCCCCAAAA GCTCCACCCCCACCCGGTCCGC CCGC GCTACCCGGAAGGGGCCGGAGC AAAGGGCCCTAAAGG TERM 776 933408 - 933350 - G 83 -16.7 -3.31792 | overlap 933351 CCACCAGGTCCATAA GCCCGG-GCTCCTCCACGAGGAGGGCGGG AAG CCTGGGCTCCTCGGGGAGGAGCTCCAGG- GGGCGGGGCTCGGGC TERM 777 933408 - 933351 - G 89 -22.7 -2.58861 | gap 1, overlap 933350 CACCAGGTCCATAAG CCCGG-GCTCCTCCACGAGGAGGGCGGG AAG CCTGGGCTCCTCGGGGAGGAGCTCCAGG GGGCGGGGCTCGGGC TERM 778 935018 - 935048 + G 70 -13.2 -3.30124 | GGCCCTGGCCCTCCT GGTGCGGGCCTTGG GCC TCGAGGCCGGCGCC TTCTGGGAGGTCCGG TERM 779 935272 - 935304 + G 100 -12 -4.91109 | gap 2 TCGCCGCCCTCCCCG TCC-CCAC-CCCGGGG GCG CCCCGGGCGAGGCGGA TTTTTGTGGTGGGCC TERM 780 935510 - 935463 - g 77 -6.8 -4.57073 | GAGCTTTTGGAAAAA CCCCCGGAGGAGCTCTACCAGG CGGT CCTGGAAGAGGCCATCCGCCAG GTCCCGGGAGCGGAG TTHA0989 934173 - 936425 + | GGDEF domain-containing protein TTHA0990 936513 - 936953 + | hypothetical protein TTHA0991 936821 - 936976 + | hypothetical protein TTHA0992 937896 - 936973 - | putative fructokinase TERM 781 937155 - 937116 - Gf 73 -13.4 -3.29144 | overlap 937117 CCAGGCCCTCCAGAA CCCCCCTCCCCCCGCCCC GCCT GAGGAGGAGGGCGAGGAG GCCCGCCGTGAAGGT TTHA0993 937895 - 938902 + | hypothetical protein TERM 782 938889 - 938904 + FH 79 -3.2 -5.03747 | overlap 938877 938876 AGTTCGTGGCCGGGG CCTTCC GGCC GTAAGG TTTTTTACACGGTTT TERM 783 939527 - 939517 - g 70 -2.4 -4.59773 | CGGGAGGCCCAAAAA GGCG CGG CCCC GCTACTTTTCGGCAA TTHA0994 938965 - 939558 + | hypothetical protein TTHA0995 939555 - 940523 + | response regulator TTHA0996 941918 - 940491 - | succinate-semialdehyde dehydrogenase TERM 784 941157 - 941147 - G 78 -8.2 -4.4261 | overlap 941148 CGGCGAAGACCAAAA CGGG CGC CCCG CCCCCAAGCTCCAAG TERM 785 942020 - 941995 - H 86 -9 -4.59773 | gap 1, opp_overlap 942014, overlap 941980 CCTTAGGGGGAAAAA GGCCCTGAGGA CCACC TCCCC-GGGCC TGGGCCGGCCTTCCA TTHA0997 942184 - 942369 + | hypothetical protein TTHA0998 944937 - 942364 - | ATP-dependent DNA helicase TERM 786 944535 - 944503 - G 82 -14.8 -3.59262 | CTCCAGAGGCCTAAA CGCCTCGGCCAGGG TCCGC CCCTGGTAGAGGCG GCGGAGGAAGGCCTC TTHA0999 947144 - 944934 - | hypothetical protein TERM 787 947002 - 946980 - G 77 -6.2 -4.59773 | CTCCAGGCCCAAAAA GGCCCCTTCC TCC GAAAGCAGCC GGTAGACATAGGCCC TTHA1000 947581 - 947192 - | hypothetical protein TERM 788 947256 - 947268 + g 77 -10.5 -4.07568 | opp_overlap 947227 CCGAGGACGAGGAGG GCCGC CCT GCGGC TTTTGGGAAGGAGGA TERM 789 947641 - 947601 - R 70 -13.1 -3.05384 | opp_overlap 947604 947604 947606 CCGCCCTCGAGGTAA GGGGCCCCGGGGAGGGTCC CGG AGAGCTTCCTCGGGGCTCC TTCCCCGAACCACTC TERM 790 947604 - 947638 + r 75 -15.7 -2.70932 | opp_overlap 947601, overlap 947604 947606 CCCTCGAGGTAAGGG GCCCCGGGGAGGGTC CCGGA GAGCTTCCTCGGGGC TCCTTCCCCGAACCA TTHA1001 948171 - 947665 - | hypothetical protein TERM 791 947819 - 947835 + g 73 -9.3 -3.87373 | overlap 947820 CTCGCCCCTGCCCTC AGGGCGG CCT CCGCCCC TTTGTCGGCGATGTA TTHA1002 948268 - 948990 + | response regulator TTHA1003 948980 - 950197 + | sensor histidine kinase TERM 792 950842 - 950791 - g 75 -14.2 -3.53012 | CGGCCCGGCTGGAAA GGATCCTGGGGCGGGCGGTGGCCC CGAA AGCCCTCCCCCTTCCCCAGGACCC CCCGAGCCTGGAAGA TTHA1004 950223 - 951479 + | hypothetical protein TTHA1005 951476 - 952501 + | hypothetical protein TERM 793 953081 - 953055 - g 73 -13.7 -3.28712 | gap 1 GCGGGCCCTGGAGAA CGCCGAGGCGGC CCTG GCCGCC-CAGCG GAAGGCCTTGAACCT TTHA1006 952501 - 953814 + | hypothetical protein TERM 794 954165 - 954128 - g 74 -9.8 -4.07568 | gap 2, opp_overlap 954160 CTCCGCGCTGGAAAA CGTGGAGGTGCCCCTGGC CTAC GCC-GGGGTGCCTCC-CG GGACGCGGAGGCGGC TTHA1007 953817 - 954503 + | ABC transporter, ATP-binding protein TERM 795 954743 - 954696 - g 76 -11.9 -3.85698 | gap 2 GGGCCTCGGGACAAA CCTCCTCACCGTGGGGCCGGCCC AGGG GAGCCGGGGCC-CGG-GAGGCGG CCTGGTGCGGGCAGG TTHA1008 954496 - 955755 + | ABC transporter, permease protein TERM 796 955928 - 955895 - f 70 -5.9 -4.30014 | gap 1, overlap 955896 CCCATGAAGCCAAAA TCCCTCGGACCCCAAG AGC CCTGGAGGACG-GGGA GTTGACGCGCTGGGG TTHA1009 955973 - 956287 + | hypothetical protein TERM 797 956312 - 956359 + GF 72 -12 -3.58522 | gap 1 GGGGGTGATGCTCAA GGGGGTGGGGT-GGGAGGTCC TCTGGCC GGACCTCCTGGCCCTGGCCCC TTTCGCCGTCCTCGT TTHA1010 956154 - 956420 + | hypothetical protein TERM 798 956944 - 956975 + G 80 -10 -4.27316 | gap 1, overlap 956945 GGCCACCTATACCTT TGGCG-CGGGCCTCG CCC CGGGGCCCTACGCCC TTTTGGGTTGGAAGG TERM 799 956945 - 956974 + G 70 -13.5 -3.16068 | gap 1, overlap 956944 GCCACCTATACCTTT GGCG-CGGGCCTCG CCC CGGGGCCCTACGCC CTTTTGGGTTGGAAG TTHA1011 956417 - 957211 + | hypothetical protein TTHA1012 957208 - 957852 + | hypothetical protein TERM 800 957889 - 957856 - T 79 -7.9 -4.56597 | opp_overlap 957858 957860, overlap 957857 957858 GTCCGCCGCTAAAAA CCGGCTCCCCCCGCC CGAG GGCGGGGGGAGTTCC TTTGGTGGGCGGCGT TERM 801 957887 - 957858 - T 71 -14.9 -2.60032 | opp_overlap 957858 957860, overlap 957857 957856 CCGCCGCTAAAAACC GGCTCCCCCCGCC CGAG GGCGGGGGGAGTT CCTTTGGTGGGCGGC TERM 802 957858 - 957889 + T 83 -14.5 -3.72695 | gap 2, opp_overlap 957857 957856 957858, overlap 957860 CCGCCGCTAAAAACC GG--CTCCCCCCGCC CGAG GGCGGGGGGAGTTCC TTTGGTGGGCGGCGT TERM 803 957860 - 957885 + T 100 -21.9 -3.56704 | opp_overlap 957858 957857 957856, overlap 957858 GCCGCTAAAAACCGG CTCCCCCCGCC CGAG GGCGGGGGGAG TTCCTTTGGTGGGCG TTHA1013 958520 - 958299 - | hypothetical protein TTHA1014 961255 - 958574 - | hypothetical protein TTHA1015 961734 - 961438 - | nucleotidyltransferase TTHA1016 964535 - 961791 - | hypothetical protein TERM 804 963938 - 963918 - G 72 -5.3 -4.36914 | GTCCTTGGGATAAAA GCGCTCAAG CTC CTTGCGGGC CTCCTCCAGCACCCA TERM 805 964585 - 964559 - R 77 -12.2 -3.72576 | opp_overlap 964573 964576 GCCTCCTTCAGGAAA CCCACCGGGC AGGGCAG GCCCGGAGGG GGCTGTGGTTCTAAG TTHA1017 966050 - 964695 - | hypothetical protein TTHA1018 967294 - 966074 - | transposase TTHA1019 967652 - 967287 - | hypothetical protein TTHA1020 971017 - 967685 - | hypothetical protein TERM 806 968599 - 968582 - G 72 -3.3 -4.59773 | overlap 968585 968592 CTCCACCTCCAAAAA CCAGAGG AAGC CCTCGAG TTTCCCGTCGGGGTC TTHA1021 971180 - 971407 + | hypothetical protein TERM 807 971401 - 971382 - f 73 -15 -2.80935 | AGCTCACGGACCAGA CCCCCCGT AGAA ACGGGGGG CGGTAGGAGGGCACC TERM 808 972159 - 972149 - g 78 -8.2 -4.37886 | overlap 972150 972151 TGACCGTGGAGAAAA CCCC CCA GGGG CGCATGGCCGCCCGG TTHA1022 971497 - 973275 + | hypothetical protein TTHA1023 973272 - 973607 + | hypothetical protein TERM 809 973670 - 973688 + F 73 -14.6 -2.92792 | opp_overlap 973657, overlap 973667 ACGCGCACGCACCCT GTGCCGTC CAG GACGGCAC TCCTTTCCCATGCGT TERM 810 973889 - 973854 - f 81 -11 -4.12902 | opp_overlap 973859 973860, overlap 973858 973860 973861 GAACGAGGGGCAAAA CGAAGATCCCCCGGGG GTAA CCCCGGGGGCCTTTTG CCATGACCGTTCTCC TERM 811 973884 - 973858 - f 80 -13.7 -3.67622 | gap 1, opp_overlap 973859 973860, overlap 973854 973860 973861 GAGGGGCAAAACGAA GATCCCCCGGGG GTAA CCCCGGGGG-CC TTTTGCCATGACCGT TERM 812 973859 - 973884 + F 82 -11.7 -4.13945 | opp_overlap 973858 973854 973860 973861, overlap 973860 AGGGGCAAAACGAAG ATCCCCCGGGG GTAA CCCCGGGGGCC TTTTGCCATGACCGT TERM 813 973860 - 973883 + F 76 -15.2 -3.08046 | opp_overlap 973858 973854 973860 973861, overlap 973859 GGGGCAAAACGAAGA TCCCCCGGGG GTAA CCCCGGGGGC CTTTTGCCATGACCG TERM 814 973883 - 973860 - f 80 -15.2 -3.41359 | opp_overlap 973860 973859, overlap 973858 973854 973861 GGGGCAAAACGAAGA TCCCCCGGGG GTAA CCCCGGGGGC CTTTTGCCATGACCG TERM 815 973882 - 973861 - f 87 -18.7 -2.64333 | opp_overlap 973860 973859, overlap 973860 973858 973854 GGGCAAAACGAAGAT CCCCCGGGG GTAA CCCCGGGGG CCTTTTGCCATGACC TERM 816 974417 - 974435 + F 72 -5.8 -4.41047 | overlap 974400 TACTGATCCGGTCTC CCAGCCCG GTT CGGACGGG TTTTCGTTGGGCCCT TERM 817 975253 - 975243 - f 79 -2.4 -5.09426 | overlap 975244 CCGAAGGCGAAAAAA CTGC CCG GCGG GTACGCAACCTCATT TTHA1024 975366 - 976148 + | hypothetical protein TERM 818 976331 - 976276 - g 87 -20.5 -3.12351 | CGCCGCCACAGGGAA GGAGGATCCCAG-GAGCCTCCCCCCCG AGGC CTGGGAGGAGGCCCTCTGGGG-CCTCC TGGTCGAGGCCATCG TTHA1025 976145 - 976531 + | hypothetical protein TTHA1026 976592 - 976771 + | hypothetical protein TERM 819 977566 - 977541 - g 72 -12.5 -3.55444 | GGCTCATGCTGGAAA CCGGGCTCCGC CGGG GCGAAGCCCTG GCCCTGCAATGGCGG TTHA1027 976892 - 978067 + | DNA integration/recombination/invertion protein TERM 820 978100 - 978129 + F 74 -7.7 -4.29304 | opp_overlap 978103, overlap 978094 978101 TAAACCGGCTAAAGC AAATCCCCCCACG CTAC CGTGGGGGGAAGC TTTGTGTTCTGATGC TERM 821 978126 - 978103 - f 100 -18.2 -4.06055 | opp_overlap 978101 978100 978094 ACCGGCTAAAGCAAA TCCCCCCACG CTAC CGTGGGGGGA AGCTTTGTGTTCTGA TTHA1028 978361 - 979218 + | thiosulfate sulfurtransferase TTHA1029 980075 - 979221 - | L-serine dehydratase, alpha subunit TERM 822 979254 - 979291 + g 90 -15.6 -3.91911 | gap 1 CTCTTCCGCCAGCCT CCGGCCTGTGGGGGTGT CCGCC AAGCCCCC-CAGGCCGG TTTCCTTGAGCTCCA TTHA1030 980110 - 980688 + | response regulator rplS 981172 - 980732 - | 50S ribosomal protein L19 TTHA1032 981948 - 981229 - | tRNA (guanine-N1)-methyltransferase TTHA1033 982436 - 981948 - | 16S rRNA processing protein RimM TTHA1034 982688 - 982470 - | hypothetical protein TERM 823 982730 - 982708 - R 100 -17.7 -4.07246 | opp_overlap 982697 982727 TCATGCTAAACGAAA GGCCCCGGG GACTT CCCGGGGCC TCGGCCGGCCTTTTC rpsP 983013 - 982747 - | 30S ribosomal protein S16 TTHA1036 984322 - 983018 - | signal recognition particle protein TTHA1037 984893 - 984420 - | hypothetical protein TERM 824 984683 - 984647 - G 72 -11.4 -3.64703 | gap 1 TGGCCTCCAGGGAAA GCC-CCTCGGCCTGGGC CTTG GCCGCGGCCGCGGTGGC GGTGGAGTGGCAGTC TTHA1038 985318 - 984890 - | methylmalonyl-CoA mutase, alpha subunit, chain B TTHA1039 986984 - 985329 - | methylmalonyl-CoA mutase, alpha subunit, chain A TTHA1040 987914 - 987039 - | cation efflux system membrane protein TTHA1041 989393 - 987915 - | lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) TTHA1042 989868 - 989398 - | anti-cleavage anti-GreA transcription factor Gfh1 TERM 825 989494 - 989484 - G 71 -8.2 -4.07568 | overlap 989485 CCCGGTGGCCCAAAA GGGC CTT GCCC ATGGGCGAGGCGTCG TERM 826 989926 - 989898 - R 81 -14.6 -3.57263 | gap 1, opp_overlap 989884 ACCCCCACTGGCAAA CG-GGAGGCCGGC GGCT GCCGACCTCCGCG CGGCCCTGGGGCCTT TTHA1043 990306 - 989944 - | hypothetical protein TERM 827 990095 - 990079 - G 74 -5 -4.56597 | overlap 990080 GGTGTGGCGGAAAAA CCCGGC CGCCT GCCCGG AGAGGTGGCGGTGGC TTHA1044 990709 - 990311 - | diacylglycerol kinase TTHA1045 991083 - 990664 - | hypothetical protein TTHA1046 992056 - 991061 - | PhoH-related protein TERM 828 991829 - 991859 + gr 78 -14.6 -3.29144 | TCCCTGGCGCAGGAG GGCGAGGAGGTCCC GGA GGGCCCTCTCCGCC TTCTCCACGGCCTCG TTHA1047 992373 - 992020 - | hypothetical protein TTHA1048 993347 - 992370 - | hypothetical protein TTHA1049 994651 - 993350 - | hypothetical protein TTHA1050 994672 - 995463 + | shikimate 5-dehydrogenase TTHA1051 995579 - 995854 + | hypothetical protein TTHA1052 995832 - 996266 + | hypothetical protein TERM 829 996336 - 996315 - g 70 -4.3 -4.45485 | opp_overlap 996325 AGGAGATCCAGAAAA GCCGCTTCA TCGC CAAGGCGGC CCCCGTGGCCTCGGA TERM 830 996325 - 996367 + G 86 -9.6 -4.56597 | opp_overlap 996315 GAAAAGCCGCTTCAT CGCCAAGGCGGCCCCCGTGG CCT CGGAGGAGGAGGCCTTGGCG TTTTTGGCCGAGAAC TTHA1053 996263 - 996838 + | hypothetical protein TTHA1054 996840 - 999344 + | DNA polymerase I TTHA1055 1000555 - 999359 - | hypothetical protein TERM 831 999459 - 999471 + g 72 -5.5 -4.40561 | overlap 999460 GTGCGGGTGAAGGCT TCCAG GCC CTGGG TTCTTTTTGAGGGGG TERM 832 1000537 - 1000554 + g 79 -5.6 -4.72272 | opp_overlap 1000532 1000548 GGGTGAAGGAGATTT TGCTCA ACATAC TGAGCA TTTTTACTCAGCACA TERM 833 1000790 - 1000780 - g 84 -2.4 -5.14563 | overlap 1000782 TTGCCCAGGAAAAAA GGCC CGT GGTC CTCCTCGCCAAGGAC TTHA1056 1000659 - 1001972 + | putative phosphoglucosamine mutase/phosphoacetylglucosamine mutase/phosphomannomutase TTHA1057 1001982 - 1002524 + | hypothetical protein TTHA1058 1002527 - 1003564 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TTHA1059 1004442 - 1003531 - | ADP-ribosylglycohydrolase TERM 834 1004636 - 1004601 - R 70 -6.6 -4.26076 | CCATGCCCAGCAAAA GGCCCTCCGCCTCCTC TCCC GGGGAGAGGGGCGGCC CCAGGTAGACCGCGT TTHA1060 1006252 - 1004900 - | Mg2+ transporter MgtE TTHA1061 1008461 - 1006341 - | hypothetical protein TERM 835 1006479 - 1006431 - G 73 -14.8 -3.21416 | gap 3 GAGGCCCACGAGGAA GGGCCTCAAGGGAAGGGCCTCCT TCCCCG AGGAGGCC-TCCCC-TG-GGCCC GCGAGGAGCCGGCCT TERM 836 1008198 - 1008176 - G 76 -7.7 -4.34402 | gap 2, opp_overlap 1008191, overlap 1008158 CGTCGGAGACCAAAA CCG-C-CCGGC TTG GCCGGTGGCGG AGCGCCTCCTTGTAG TTHA1062 1009728 - 1008529 - | GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase TTHA1063 1010312 - 1009728 - | riboflavin synthase subunit alpha TTHA1064 1011446 - 1010313 - | diaminohydroxyphosphoriboxylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase (RibD) rho 1012942 - 1011662 - | transcription termination factor Rho TTHA1066 1013610 - 1012939 - | putative translaldolase TERM 837 1013880 - 1013866 - H 77 -12.8 -3.72695 | AGCCGCGGGAGGAAA GGGGCC CAA GGCCCC GAGTAATGCCCGCCG TERM 838 1013981 - 1014004 + H 100 -17.4 -4.2558 | GCCTTTCGTGGCTTT CGTCCGCGCC TTCG GGCGCGGGCG TTTTGCTAGGAGGTG TERM 839 1014880 - 1014856 - g 90 -15.7 -4.07568 | CCCCGGTCCTCAAAA CCTTCCCGGGC AAG GCCCTGGAAGG CCTCCCCTACACCCC TERM 840 1015263 - 1015247 - g 74 -2.9 -4.72272 | overlap 1015250 CTGGTTCATCAAAAA CACCCTC TTC AAGGACG AGCTCATCCGCAAGA ileS 1014024 - 1017155 + | isoleucyl-tRNA synthetase TERM 841 1017188 - 1017161 - f 87 -18.4 -2.54896 | overlap 1017157 GGCGGAGTGAACCCA CCCCACGCGGGC TTGC GCCAGCGTGGGG ACCCCGCAAAGGCCT TTHA1068 1017248 - 1018282 + | proline dipeptidase TTHA1069 1018306 - 1019160 + | cell division protein FtsX TERM 842 1019258 - 1019236 - g 74 -7.6 -4.25104 | overlap 1019237 CGCGGCCCAGGAAAA GCGCGTCCAG GAT CTGGAGGCCC AGGCCGCCCGGGCCC TTHA1070 1019162 - 1020397 + | hypothetical protein TTHA1071 1021046 - 1020429 - | competence protein ComF TTHA1072 1022019 - 1021027 - | translation initiation factor, aIF-2B alpha subunit-related protein TERM 843 1022062 - 1022038 - R 72 -8.4 -4.05788 | overlap 1022039 GCCTCCTAAAGGAAA GCGGGCGGGG CCATC CCCCGCCCTA GACCAGAGGGCCTAG rpmE 1022289 - 1022074 - | 50S ribosomal protein L31 TTHA1074 1022554 - 1022375 - | hypothetical protein TERM 844 1022633 - 1022590 - H 81 -7.8 -4.64861 | overlap 1022592 GCTTGCTAAAATAAA GTGGCCCGGGACGAGGGCGC GGTC GCGCCCGAGGGCCGAACCCC TCGGGTGAGGAAAGT TERM 845 1022962 - 1022987 + H 100 -14.7 -5.40072 | overlap 1022964 TTACGCCTCGTCCCG GAGGCGCCCGA GCGT TCGGGCGCCTG TTTTTTTGCCCCGGG TERM 846 1022964 - 1022985 + H 100 -17.3 -4.34482 | overlap 1022962 ACGCCTCGTCCCGGA GGCGCCCGA GCGT TCGGGCGCC TGTTTTTTTGCCCCG TERM 847 1023137 - 1023079 - H 100 -12.5 -4.36914 | CTTCGCGTCAGAAAA CCTTCCA-GCCTCACGGTCCCCGGAGG CCCTCCT CCGCCACGGACC-CGAGGCCCGGAAGG TGGGACCAGGTGGAA TTHA1075 1023154 - 1023588 + | cell division protein MraZ TERM 848 1024381 - 1024355 - g 79 -5.1 -4.72272 | gap 1, overlap 1024356 1024379 GGTGCTCACCAAAAA GCC-CCTCGTCC CCTC GGAAAAGGAGGC GGCCCAAAACCCCAG TERM 849 1024427 - 1024391 - g 74 -10 -4.08216 | overlap 1024379 1024392 GGAGGCGGCCCAAAA CCCCAGGGCCCGGAGC GCCAA GCTCCGGGCGGCGGAA AAGGAGGCCCCGTGA TTHA1076 1023585 - 1024442 + | hypothetical protein TTHA1077 1024439 - 1024684 + | hypothetical protein TERM 850 1025920 - 1025900 - g 71 -8.9 -4.15565 | opp_overlap 1025915 TCCACCACCCCAAAA CCCGGATCC ACG GGAGCCAGG TGGCCGCCCCCATCT TTHA1078 1024681 - 1026000 + | penicillin-binding protein TERM 851 1026386 - 1026358 - g 76 -15.9 -3.24902 | overlap 1026348 1026361 CAAGACCACCACCAA GGAGGCCCTGGCC CAG GGCCTGGGCCTTC CCGCCCCCCCGGGGA TERM 852 1026383 - 1026361 - g 72 -16.2 -2.80492 | overlap 1026348 1026358 GACCACCACCAAGGA GGCCCTGGCC CAG GGCCTGGGCC TTCCCGCCCCCCCGG TERM 853 1027092 - 1027059 - g 91 -18.1 -3.64822 | AGCTCGGCAGGGAAA GCCTCCGCCTCCACC TCGA GGTGGCGGAGGAGGC GGCGAGGCTGGGCCT TTHA1079 1025984 - 1027300 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase TTHA1080 1027276 - 1027974 + | hypothetical protein TERM 854 1028073 - 1028117 + G 70 -14.2 -3.21099 | gap 1 GCCGAGGGCCCTGAG GCCCACCTCGCCAAGGC-GGG CACC CCCAGCATGGGCGGGGTGGCC TTCCTCCTGGCCGCG TTHA1081 1027965 - 1028822 + | phospho-N-acetylmuramoyl-pentapeptide- transferase TERM 855 1029407 - 1029394 - gf 75 -4.5 -4.58283 | CAACCTCCTCAAAAA CCTCA CCCC CGAGG ACGCCCTCGTCTACA TERM 856 1029775 - 1029758 - gf 70 -8.3 -3.96148 | GGCGGGGAGGACAAA GGGGCCG ACCT CGCCCCC CTCCTCCCCCTCCTC TTHA1082 1028819 - 1030072 + | UDP-N-acetylmuramoylalanine--D-glutamiate ligase TTHA1083 1030044 - 1031111 + | cell cycle protein FtsW TERM 857 1031180 - 1031196 + F 70 -11.5 -3.35679 | GCGGAGGAGCTCAGC GGCGGGG CCA CCCCGTC TTCTACCTGGGGGCG TERM 858 1031944 - 1031986 + G 71 -8.9 -4.08767 | gap 1 CTGGACGGCGGGGCC CAGCTCGCCAACGCCCGGGC CTAC GCCCAGGCGGGGG-GGGCGG TTTTGGGGGCGTGGG TTHA1084 1031320 - 1032126 + | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TTHA1085 1032123 - 1033463 + | UDP-N-acetylmuramate--alanine ligase TERM 859 1034042 - 1034030 - g 71 -6.2 -4.19506 | AGCCCAAGCGGAAAA GCGC CGGGT GCGC CTTCAAGAACCCCCC TTHA1086 1033453 - 1034250 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 860 1034792 - 1034809 + G 78 -8.3 -4.45723 | opp_overlap 1034781 1034789 1034790, overlap 1034794 AGTACGCCCAAACCG CGCGCCC TAAG GGGCGGG TTTTCGTGTATTCTT TTHA1087 1034263 - 1034847 + | cell division protein FtsQ-related protein TERM 861 1035401 - 1035357 - g 80 -17 -3.14132 | CGGGCCGTGGAGGAA GCGGGCCTCGCCCTGGACGC CGTCT GCGTCCAGGCCCTGGCCAGC GGGCTCGCCGTCCTC TTHA1088 1034844 - 1036079 + | cell division protein FtsA TERM 862 1036536 - 1036526 - g 80 -6.8 -4.7373 | GGAGGGCATCAAAAA GCTC AAA GAGC GGGTGGACGCCATGG TTHA1089 1036092 - 1037150 + | cell division protein FtsZ TERM 863 1037332 - 1037379 + G 79 -12.6 -3.78934 | gap 1, overlap 1037333 CACGCCCGGGTCCTG GAGGTCCTCCACCGCTTCCGGCC CGA GGC-GGTGGCGGTGGAGGAGCAG TTCTTCTACCGCCAA TERM 864 1037333 - 1037378 + G 73 -16.1 -2.87146 | gap 1, overlap 1037332 ACGCCCGGGTCCTGG AGGTCCTCCACCGCTTCCGGCC CGA GGC-GGTGGCGGTGGAGGAGCA GTTCTTCTACCGCCA TTHA1090 1037164 - 1037664 + | Holliday junction resolvase RuvC TTHA1091 1038246 - 1037761 - | hypothetical protein TERM 865 1039166 - 1039210 + G 72 -16.3 -2.78384 | ACTTCGCCCACTTCC AGGCCTCCTGGCCCACCCTGG GCT TCAAGGTGGCCCAGGCGGCCC TCTACTACGGAGCCG TTHA1092 1038295 - 1039437 + | hypothetical protein TTHA1093 1039946 - 1039434 - | hypothetical protein trpA 1040780 - 1039965 - | tryptophan synthase subunit alpha TERM 866 1040172 - 1040150 - G 72 -12.6 -3.53012 | TGGCCTTGCCGGAAA CCCCGAAGCC CAC GGCCACGGGG AGGGCGGTCCTGGCC TERM 867 1040708 - 1040688 - G 74 -4.6 -4.57073 | overlap 1040689 1040690 CACCGCCTGCAAAAA GCCCTCCC GGCTG GGGAAGCC CGCGGTGAGGTAAGG TTHA1095 1042033 - 1040777 - | tryptophan synthase subunit beta TERM 868 1042441 - 1042414 - g 83 -7.6 -4.67048 | opp_overlap 1042419 GCAGGCGAAAAGAAA CAAGCAGGCCTC GGAA GGGGCCCTCTTG GACGAGGAGGCCTTG thyX 1042070 - 1042882 + | FAD-dependent thymidylate synthase TTHA1097 1044909 - 1042879 - | DNA ligase [NAD+] TERM 869 1043374 - 1043390 + g 83 -5.1 -4.76075 | opp_overlap 1043340, overlap 1043365 CCCCAAGGCGTAGAG GAGGC GCTCCAG GCCTC TTTTCTTGCTCTCCT TERM 870 1044124 - 1044150 + g 84 -6.4 -4.8622 | CGCCCCCACGGCCCG GGCGTAGCCGTG CTC CACGGGGAAGCC TTTTTCCTTGAGCCA TTHA1098 1044981 - 1046168 + | membrane lipoprotein TERM 871 1046207 - 1046186 - f 85 -12.9 -4.08767 | opp_overlap 1046187, overlap 1046162 1046187 GGCAGGGGCCCAAAA GCCGGGGCC TTCG GGCCCCGGT TTTCCCGTATACTCC TERM 872 1046206 - 1046187 - f 79 -16.4 -3.05046 | opp_overlap 1046187, overlap 1046162 1046186 GCAGGGGCCCAAAAG CCGGGGCC TTCG GGCCCCGG TTTTCCCGTATACTC TERM 873 1046187 - 1046206 + F 100 -16.4 -4.17657 | opp_overlap 1046162 1046186 1046187 GCAGGGGCCCAAAAG CCGGGGCC TTCG GGCCCCGG TTTTCCCGTATACTC TERM 874 1047293 - 1047309 + G 80 -6.5 -4.67904 | overlap 1047297 TCGGGGACCAGCACC GCCCC CCCTTCC GGGGC TTTTTGGGCTTCCTG TTHA1099 1046227 - 1047717 + | sugar ABC transporter, ATP-binding protein TTHA1100 1048678 - 1047749 - | hypothetical protein TERM 875 1048191 - 1048179 - G 70 -4.7 -4.36914 | overlap 1048180 TCCTCCTCCAGAAAA CGGGC CTC GCCCC CGGAGAGAAGAAGCT TTHA1101 1049539 - 1048679 - | hypothetical protein TERM 876 1049086 - 1049102 + g 71 -6.5 -4.21194 | GCCCCTCCTGGTTGC CGCTCTT GAG GAGGGCG TTTTCGCTGGTGGAG TTHA1102 1050081 - 1049536 - | hypothetical protein TTHA1103 1051146 - 1050124 - | FemA-related protein TERM 877 1050287 - 1050310 + g 79 -7.3 -4.59773 | TTGAAGCGGTGGATC CCCTCGGCG TGGCTC CCCCGGGGG TTTTTGGGGATGCCC TERM 878 1051803 - 1051813 + G 71 -8.2 -4.0896 | overlap 1051790 CGCCGTCCGGCACCG GCCC GGG GGGC TTTTGGAGGCGCTTT TTHA1104 1051201 - 1052043 + | prephenate dehydratase TTHA1105 1052431 - 1052030 - | hypothetical protein TTHA1106 1053861 - 1052428 - | hypothetical protein TTHA1107 1053928 - 1054557 + | hypothetical protein TTHA1108 1054554 - 1055660 + | hypothetical protein TERM 879 1055831 - 1055850 + GF 72 -13.6 -3.09516 | CGAGGCGAGCCCCGC GGTCCACG TCCC CGTGGACC TTCCCTACTACCCCG TERM 880 1056445 - 1056476 + G 74 -9.5 -4.13767 | overlap 1056470 CCCCACCCCCCACCC GGAGGAGGTCC TGGGGGCGGC GGACCTCTTCC TTTTGGCCTCGGAGG TTHA1109 1055670 - 1056677 + | putative glycosyltransferase TERM 881 1056707 - 1056678 - gT 80 -15 -3.48276 | overlap 1056681 GCCTCCCCGAGATAA GGAGGAGGGCCC GGGAGT GGGCCCTCCTGC GCTTCCACCCGGAAA TERM 882 1056704 - 1056681 - gT 76 -15.3 -2.88822 | overlap 1056678 TCCCCGAGATAAGGA GGAGGGCCC GGGAGT GGGCCCTCC TGCGCTTCCACCCGG TTHA1110 1056155 - 1056769 + | hypothetical protein TTHA1111 1059180 - 1056766 - | alternative ATP-dependent protease La (Lon protease) TERM 883 1057581 - 1057618 + g 79 -7.5 -4.56914 | TGAGGCGCGTGAGGG CGGCCTCGGTCACCACC ACCT GCTCGGGCTCGAGGCCG TTTTCCTTTAGCTGC TERM 884 1058918 - 1058957 + g 71 -15 -3.06315 | overlap 1058928 ACCCGGGCGAAGGCC TGCACCAGGACCTGGACG GAGC CGTCCGGGTTCTTGCGCA TCTTCAGGATGTTGC TERM 885 1058928 - 1058947 + g 72 -11.4 -3.65201 | overlap 1058918 AGGCCTGCACCAGGA CCTGGACG GAGC CGTCCGGG TTCTTGCGCATCTTC TERM 886 1059415 - 1059366 - g 95 -16.3 -4.36914 | gap 1, overlap 1059367 1059368 CCCTCGGGCAGAAAA GCGGGGGCGGGGTCGGGGGCAGGC CCT ACGTGCCCTCCACCCCGCCGCC-C ATGAGCCCGGGGCCC TERM 887 1059416 - 1059367 - g 82 -18.5 -3.21934 | gap 1, overlap 1059366 1059368 CCTCGGGCAGAAAAG CGGG-GGCGGGGTCGGGGGCAGGC CCT ACGTGCCCTCCACCCCGCCGCCCA TGAGCCCGGGGCCCG TERM 888 1059414 - 1059368 - g 85 -20 -2.52946 | overlap 1059366 1059367 CTCGGGCAGAAAAGC GGGGGCGGGGTCGGGGGCAGGC CCT ACGTGCCCTCCACCCCGCCGCC CATGAGCCCGGGGCC TTHA1112 1059293 - 1060144 + | hypothetical protein TTHA1113 1061073 - 1060141 - | L-lactate dehydrogenase TERM 889 1061680 - 1061695 + G 81 -8.2 -4.58466 | overlap 1061667 1061691 CTGGTCCTGGTGGGG GCCTCC TTGG GGGGGC TTTTCTCCTTGTGGC TTHA1114 1061089 - 1062027 + | ferric enterobactin esterase-related protein TTHA1115 1062024 - 1062698 + | TerC family integral membrane protein TTHA1116 1062691 - 1063227 + | hypothetical protein TTHA1117 1065202 - 1063217 - | iron-sulfur protein TERM 890 1065439 - 1065453 + G 80 -11.4 -4.07568 | GTCGCCTTCCTCGTG GGCCAG ACC CTGGCC TTTTACGCCGCGGGA TTHA1118 1065277 - 1065480 + | hypothetical protein TTHA1119 1065911 - 1065456 - | hypothetical protein TTHA1120 1066743 - 1065895 - | methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase TERM 891 1066237 - 1066224 - G 70 -9.5 -3.78934 | opp_overlap 1066224 CCTCCCGCAGAAGAA GCCCC GCCA GGGGC TTTCCCACGATGTTG TTHA1121 1067199 - 1066744 - | N-utilization substance protein B TTHA1122 1067521 - 1067183 - | hypothetical protein TTHA1123 1068869 - 1067532 - | acetyl-CoA carboxylase, biotin carboxylase subunit TTHA1124 1069363 - 1068866 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein TTHA1125 1070012 - 1069458 - | elongation factor P (EF-P) TERM 892 1069547 - 1069526 - G 71 -6.5 -4.25104 | gap 1 CGGGTTCCACGAAAA GGGGCACCTG GAC CACG-GCCCC CGTCTCCAGGGTGGC TTHA1126 1070911 - 1070009 - | hypothetical protein TTHA1127 1071082 - 1070918 - | hypothetical protein TERM 893 1070992 - 1070977 - G 85 -8.2 -4.73613 | overlap 1070981 CGAGGAGGAAGAAAA GCCAGG AGCG CCCGGC GCCGAGAAGCCGGGC TTHA1128 1071976 - 1071092 - | peptidase TERM 894 1072006 - 1071964 - G 81 -12.6 -3.89336 | overlap 1071959 GGAAGGAAAGCCAAA GCCCGAGGCGCATGCCCCCA GGC TAAGGGGAAACCCCTCGGGC TAAATGTGGTCCACC TTHA1129 1072887 - 1072006 - | agmatinase (SpeB) TERM 895 1072347 - 1072357 + g 90 -8.2 -5.00616 | opp_overlap 1072345 1072347 GGTGGGCGGGAAAGA GGGC CAC GCCC TTTTTTCGGGCCAAG TERM 896 1072548 - 1072526 - G 77 -4.6 -4.7078 | overlap 1072518 1072527 TGAAGGAGGGAAAAA TCCCCCAGGG CCT CCCGGTGGGC CTGGACCAGGGGGTG TERM 897 1072939 - 1072926 - R 77 -3.7 -4.71426 | overlap 1072935 GGCCCAGGAAGAAAA GCTCC AAGA GGCGC AGGAGGGCCTGCACC TTHA1130 1074231 - 1072906 - | ArgE/DapE/Acy1 family peptidase TERM 898 1074401 - 1074383 - g 73 -13.8 -3.28712 | CGTCCTCGCCCACAA GGAGGCCC TCT GGGCCCCC AAGCCTCCCCCCCTG TERM 899 1074537 - 1074572 + G 85 -16.9 -3.53012 | overlap 1074536 ATGGGCCTCTACGTG GACGAGGCCGGGGAG CACGCC CTCCTCGTCCTCGTC TTTGACGAGACCGCG TTHA1131 1074249 - 1074740 + | gliding protein (MglB) TERM 900 1075311 - 1075331 + G 75 -16.1 -3.01712 | opp_overlap 1075295 GTGAGCCGCCTGGTC CTCGCCCGC GTG GCGGGCGGG TCTTAAGCGGCCCAC TTHA1132 1074747 - 1075337 + | gliding protein mglA TERM 901 1075353 - 1075374 + F 100 -18.7 -4.72272 | GCGGCCCACGCGCCC GGGGGCGGG GCGA CCCGCCCCC TTTTTACTCCCCACC TERM 902 1075444 - 1075427 - f 93 -9.9 -4.60924 | opp_overlap 1075398 1075397 CAAATGTCCCAAAAA GTCCCTT TGCC AAGGGAC AAATGCCCCTCACCG TERM 903 1075544 - 1075533 - g 74 -2.2 -4.67982 | gap 1 GGGTATGGAAGAAAA GC-CC AAA GGCGC ACTGGCGGTCATCCT TTHA1133 1075522 - 1075626 + | ba3-type cytochrome c oxidase polypeptide IIA TTHA1134 1075629 - 1076135 + | ba3-type cytochrome c oxidase polypeptide II TTHA1135 1076139 - 1077827 + | ba3-type cytochrome c oxidase polypeptide I TERM 904 1077845 - 1077873 + F 83 -8.7 -4.60487 | overlap 1077846 TAGGCCCTTTGTCCC TTGACCCCCTCCC CCG GGGAGGGGGAAAC TTTTTGGGGATGCTC TERM 905 1077846 - 1077872 + F 73 -12.2 -3.3581 | overlap 1077845 AGGCCCTTTGTCCCT TGACCCCCTCCC CCG GGGAGGGGGAAA CTTTTTGGGGATGCT TTHA1136 1077883 - 1078353 + | hypothetical protein TERM 906 1078552 - 1078572 + G 71 -9 -4.13767 | overlap 1078527 1078551 TTTCCGACCGGCTCG GGAGGAGG CGCCC CTTCCTCC TTTTGGGCTACGGCC TERM 907 1079444 - 1079486 + G 79 -17.7 -2.80816 | overlap 1079423 CGCCCTCGCCCTCGG CGCCCTCCTCCTCTTCCTG GTTGA CGGGACGGGGAGGAGGGCC TATCCTGGGTAAGGC TTHA1137 1078350 - 1079498 + | major facilitator superfamily transporter rpsO 1079567 - 1079836 + | 30S ribosomal protein S15 TERM 908 1079849 - 1079881 + F 75 -9 -4.07568 | opp_overlap 1079868, overlap 1079854 TAAACTGGGGAACAG GTCGGGGGCGGGGC CGAAA GCTCCGCCCTTCGC TTTTGGAAGGAGCGC TERM 909 1079854 - 1079876 + F 77 -14.1 -3.36823 | opp_overlap 1079868, overlap 1079849 TGGGGAACAGGTCGG GGGCGGGGC CGAAA GCTCCGCCC TTCGCTTTTGGAAGG TTHA1139 1079898 - 1082039 + | polynucleotide phosphorylase/polyadenylase TTHA1140 1082096 - 1083817 + | metallo-beta-lactamase superfamily protein TERM 910 1083831 - 1083856 + T 72 -11.7 -3.53012 | overlap 1083833 AGGCCTTTCCCCTAC CGGGGGGGCGC GTAG GCCGCCCCCCG TTTCCACACCGCCCG TTHA1141 1086256 - 1083827 - | cation-transporting ATPase TERM 911 1085058 - 1085026 - G 86 -9.8 -4.56597 | gap 1, opp_overlap 1085050, overlap 1085027 CGGCCTCCTCAAAAA GCCTCGC-CTGCTCC TCCT GGGGCAGGGCCAGGC GGGGGATGAGGGCCT TERM 912 1085293 - 1085330 + g 71 -6.1 -4.18494 | CCAAAAGGGCTTTCT CCGGGTCGGGGCTCAGG AGCT CCTGGACCTCCATGCGG TTTTCCGTGAGGGTG TTHA1142 1086644 - 1086288 - | response regulator receiver domain-containing protein TTHA1143 1089513 - 1086622 - | sensor histidine kinase TERM 913 1088976 - 1089004 + g 72 -12.3 -3.61398 | opp_overlap 1088964 1088965, overlap 1088935 AAAGCCGCCTGAGCG CCGCGTCCCGCTC CTT GAGCAGGGCGCCG TTCTTGAGGGCCAAG TTHA1144 1089523 - 1090755 + | acetyl-coenzyme A dehydrogenase, medium chain TTHA1145 1090767 - 1091510 + | electron transfer flavoprotein, beta subunit TTHA1146 1091514 - 1092464 + | electron transfer flavoprotein, alpha subunit TERM 914 1092471 - 1092512 + T 100 -19.5 -4.07568 | gap 1, opp_overlap 1092461 1092477 1092480, overlap 1092480 AAGGACTGAGCCGAA G-GTAAAGAACCCCCCGCCC AGA GGGCGGGGGGTTCTACACGC TTTTCGCCGGGGCCC TERM 915 1092505 - 1092477 - T 100 -26.1 -3.76125 | opp_overlap 1092471 1092480, overlap 1092461 1092480 TGAGCCGAAGGTAAA GAACCCCCCGCCC AGA GGGCGGGGGGTTC TACACGCTTTTCGCC TERM 916 1092480 - 1092502 + T 100 -22 -3.33009 | opp_overlap 1092461 1092480 1092477, overlap 1092471 GCCGAAGGTAAAGAA CCCCCCGCCC AGA GGGCGGGGGG TTCTACACGCTTTTC TERM 917 1092502 - 1092480 - T 100 -22 -4.0098 | opp_overlap 1092471 1092480, overlap 1092461 1092477 GCCGAAGGTAAAGAA CCCCCCGCCC AGA GGGCGGGGGG TTCTACACGCTTTTC TTHA1147 1093020 - 1092559 - | hypothetical protein TERM 918 1092604 - 1092656 + g 88 -4.1 -5.14965 | gap 3, overlap 1092616 AGGCGGCGCCCCCTC GTCCAGCATCCGGGCCTCCTCCACCC CTTC GGG-GGAAGCGGCCTGGCT--TGGGC TTTTTTCCTCGGCCT TERM 919 1093787 - 1093774 - g 89 -5.9 -5.1287 | TCCACATGGAAAAAA GCGGG GTGG CCCAC CTGGAGGGGAAGGAC TTHA1148 1093080 - 1094657 + | propionyl-CoA carboxylase, alpha subunit TTHA1149 1094657 - 1095316 + | uracil-DNA glycosylase TERM 920 1095329 - 1095299 - T 70 -11 -3.61178 | opp_overlap 1095300 CTGATGGAGGCTAAA CGCCTCGCCGGGCT TTG AGCCAGGAGAGGAG GTCCTCGTAGTCCAA TTHA1150 1097021 - 1095294 - | DNA polymerase beta family protein TERM 921 1096094 - 1096150 + g 70 -4.3 -4.4009 | CCCGGAGGGGGGGCG GGATC-CAGGGGAGGCCCAAGGCGGCG TAGAC CTCCTCCTCCG-TCTCCCCGGCGATCC TTTTCTCCCCTCGGA TERM 922 1096267 - 1096308 + g 70 -2.1 -4.56597 | gap 1, overlap 1096269 1096269 1096301 TGGAGGCCCGCCCCG TAGCTTTCGGGGGGGACCAC CCT GAGGTCCAC-CTGGAGGCCG TTTTTCAGGAAGACG TTHA1151 1097569 - 1097090 - | hypothetical protein TERM 923 1097903 - 1097934 + Gr 70 -13 -3.02144 | gap 1, overlap 1097933 CAACTGGACCATCGT CC-CCTTCGCCCACC CCG GCTGGGCGAGGGCGG TCTTCCCAGGCCTCC TERM 924 1098554 - 1098533 - gR 70 -11.5 -3.44051 | GGCCTACCAGGAGAA CCTCGAGGG CCGC CCCTCGGGG GAGGCCTTCCGGAAG TTHA1152 1097469 - 1098695 + | aminopeptidase T TTHA1153 1100069 - 1098696 - | mercuric reductase TERM 925 1099354 - 1099328 - G 74 -4.4 -4.56597 | gap 1 TCTCCGCCTCAAAAA CCCCCCG-GTC GGTCCG GACGCGGAAGG CCCCTTCCCGGGCCA TERM 926 1099809 - 1099832 + g 82 -14.6 -3.59979 | overlap 1099796 GAGGGCCGCGATCAG GCCCTCCTTG CCCG CGAGGAGGGC TTTCCAGTCCACCCC TTHA1154 1100188 - 1100066 - | hypothetical protein TTHA1155 1100626 - 1100198 - | mercuric resistance operon regulatory protein (MerR) TTHA1156 1101865 - 1100627 - | O-acetylhomoserine (thiol)-lyase/O-acetylserine (thiol)-lyase TERM 927 1101252 - 1101238 - G 71 -9.2 -4.07568 | overlap 1101220 CCGCCCCGCCCAAAA CGGAGC CGT GCCCCG AGGCCCACTTGGTGA TERM 928 1102688 - 1102667 - g 70 -13 -3.35679 | CGGCGGGACCTACAA GGGCGTGG ACGTGA CCACGCCC ACCGTGGCGGTCCAG TTHA1157 1101963 - 1102907 + | immunogenic protein TERM 929 1102951 - 1102924 - f 100 -18.4 -4.11216 | overlap 1102925 1102927 CCGCTAGGCCGAAAA GGAGGGGCCCCC TGAG GGGGGCCCCTCG TCCGGTAAGGGAAAG TERM 930 1102950 - 1102925 - f 100 -21.9 -3.06515 | overlap 1102924 1102927 CGCTAGGCCGAAAAG GAGGGGCCCCC TGAG GGGGGCCCCTC GTCCGGTAAGGGAAA TERM 931 1102948 - 1102927 - f 90 -18.7 -3.09004 | overlap 1102925 1102924 CTAGGCCGAAAAGGA GGGGCCCCC TGAG GGGGGCCCC TCGTCCGGTAAGGGA TERM 932 1103235 - 1103249 + G 75 -12.8 -3.70149 | CCCTGGCCCTGCTCG GCGCCC TGG GGGCGC TTTACGTGGTCTGGG TERM 933 1103840 - 1103878 + G 74 -4.5 -4.59773 | gap 1, overlap 1103833 1103840 1103841 AACGGCCAGCTCATG C-CCCCGGTGATGGGGGC CGCG GCCTTCATCATGGCGGAG TTTTTGAACATCCCC TTHA1158 1102970 - 1104943 + | hypothetical protein TTHA1159 1104950 - 1105684 + | amino acid ABC transporter, ATP-binding protein TERM 934 1105948 - 1105972 + G 87 -3.3 -5.1356 | CCTCGGACCCTTGGT GGCGGTGGGGC TTG GGGCCGCGGCC TTTTTCTTCCTGGGG TTHA1160 1105691 - 1106107 + | hypothetical protein TTHA1161 1106909 - 1106082 - | hypothetical protein TTHA1162 1107326 - 1106913 - | excisionase domain-containing protein TTHA1163 1107618 - 1107388 - | hypothetical protein TERM 935 1108317 - 1108329 + G 72 -3.3 -4.57569 | opp_overlap 1108307 AAGGAGGAGCTGAAA GCTCT GGA GGGGC TTTTTGACGCCGTCC TTHA1164 1107645 - 1108409 + | indole-3-glycerol phosphate synthase TTHA1165 1108414 - 1109121 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TTHA1166 1109109 - 1109426 + | hypothetical protein TERM 936 1109912 - 1109875 - gf 85 -13.3 -4.08216 | GGAGCTTTTGGAAAA CGGGGTGGAGGTGATCG TCAC CGACCACCACACCCCCG GCAAGACCCCTCCCC TTHA1167 1109423 - 1111423 + | single-stranded DNA specific exonuclease RecJ TTHA1168 1111395 - 1111958 + | hypothetical protein valS 1114530 - 1111942 - | valyl-tRNA synthetase TTHA1170 1115370 - 1114585 - | amino acid ABC transporter, permease protein TERM 937 1114903 - 1114867 - G 80 -11.6 -4.07568 | gap 1 GTCCGCGGCGGAAAA CCCCAAGGACCAAGCGG CCTC CCACT-GCCCCTTGGGG ATCGCCTGGATGCCG TERM 938 1115368 - 1115356 - G 80 -6.2 -4.62302 | GAAGAGGGCGAAAAA GCGG AGGTA CCGC ATGGGGCGAAAAGGG TERM 939 1115429 - 1115381 - R 93 -15.8 -4.08767 | opp_overlap 1115383 1115392, overlap 1115382 CGCATGGGGCGAAAA GGGGCCCGGACGGCCTAGGGCC TTTAG GGCCTTTGGGCGTCCGGGCGCG GCAGGGTCACTTGCA TERM 940 1115428 - 1115382 - R 100 -19.3 -3.05046 | opp_overlap 1115383 1115392, overlap 1115381 GCATGGGGCGAAAAG GGGCCCGGACGGCCTAGGGCC TTTAG GGCCTTTGGGCGTCCGGGCGC GGCAGGGTCACTTGC TERM 941 1115383 - 1115411 + r 74 -12.3 -3.57144 | opp_overlap 1115382 1115381, overlap 1115392 CATGGGGCGAAAAGG GGCCCGGACGGCC TAG GGCCTTTAGGGCC TTTGGGCGTCCGGGC TTHA1171 1116200 - 1115436 - | amino acid ABC transporter, periplasmic amino acid-binding protein TTHA1172 1118700 - 1116241 - | alpha-glucan phosphorylase TERM 942 1116837 - 1116847 + g 77 -4.6 -4.6902 | overlap 1116806 1116838 CGCGCTCGTCCCCGA TGGC GAA GCCG TTTTTGCCGTTGTAG TTHA1173 1120187 - 1118715 - | Trk system potassium uptake protein (TrkG) TERM 943 1118946 - 1118931 - GR 72 -3.9 -4.56597 | overlap 1118916 1118933 GTCCTTTTCCAAAAA GGCCA GGGCCA CGGCC CCCAGGACGAAGAGG trkA 1121496 - 1120156 - | potassium transporter peripheral membrane component TTHA1175 1122814 - 1121510 - | hypothetical protein TERM 944 1122511 - 1122464 - G 72 -3.2 -4.60487 | gap 1, opp_overlap 1122465, overlap 1122465 GATGAGGTCCAAAAA GGGGTCCCGG-GGCGCGGGAAGC ACC ACCTGCACCGCCTCCAGAACCCT TTCCACCTCCCCCGG TTHA1176 1123712 - 1122855 - | hypothetical protein TERM 945 1123093 - 1123113 + g 79 -16.1 -3.30124 | GCGGGGGCCTCCTCC GCCGCCTCC TGG GGGGGCGGC TTCTCGGGGGTGAGG TERM 946 1123290 - 1123277 - G 73 -9.5 -3.90291 | AGCCGTCCAAGTAAA CCCGG GCTC CCGGG GGGTCGCTCTGGACC TTHA1177 1124562 - 1123717 - | indigoidine synthase A like protein TTHA1178 1125322 - 1124570 - | hypothetical protein TTHA1179 1126086 - 1125298 - | fructosamine-3-kinase TERM 947 1125541 - 1125514 - GR 73 -11.3 -3.71848 | gap 1 CTCCCCCACGAAGAA GGAGGGGTCCAG GAGGG CCGG-CCCCTCC CGGGCGAAGTAGACG TTHA1180 1126534 - 1126049 - | low molecular weight phosphotyrosine protein phosphatase TTHA1181 1128143 - 1126596 - | sensor histidine kinase TTHA1182 1128864 - 1128130 - | hypothetical protein TTHA1183 1130962 - 1128875 - | penicillin-binding protein 1B TERM 948 1129443 - 1129402 - G 71 -16 -2.62184 | gap 2, overlap 1129369 TGGCCTGGTACAGGA CCCGGCCCTCCTGGTCCTCC ACCC GCAGGACCAGGAGGG--GGG CCACCCGGTAGCCGC TTHA1184 1131338 - 1130979 - | putative response regulator TTHA1185 1133034 - 1131928 - | translation-associated GTPase TERM 949 1133066 - 1133053 - H 100 -9.5 -5.44721 | opp_overlap 1133053 1133052 1133050 AGGACCTCAAAAAAA GCCCC AAGC GGGGC CTCTTTCCATCCTAT TTHA1186 1133109 - 1133771 + | deoxyribose-phosphate aldolase TTHA1187 1133761 - 1134891 + | hypothetical protein TTHA1188 1134867 - 1135430 + | septum formation Maf protein TTHA1189 1135427 - 1136215 + | rod shape-determining protein MreC TTHA1190 1136226 - 1136684 + | rod shape-determining protein MreD TTHA1191 1136681 - 1138408 + | penicillin-binding protein 2/cell division protein FtsI TTHA1192 1138413 - 1138952 + | septum site-determining protein MinC TERM 950 1139040 - 1139067 + T 77 -16.2 -2.52464 | GCGGGAGGGCCCCTC CCCCGCGCTGGC CCAA GCCGGCACGGGG TGGGTTAGAAGGCGA TTHA1193 1139509 - 1139072 - | hypothetical protein TTHA1194 1139778 - 1139506 - | hypothetical protein TTHA1195 1140373 - 1139798 - | hypothetical protein TERM 951 1140380 - 1140355 - G 100 -14.7 -4.70319 | GGAGGAAAAGCAAAA GGAGGGGACGC CAGC GCATCCCCCCC ATCATAGCCTCCCCT argJ 1141615 - 1140470 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 952 1140941 - 1140914 - G 75 -10.5 -3.9122 | CACCCCCTCAAAGAA GGCCTTCAGGG GCACCT CCCCGTAGGCC CCGTTGGCCATGAGG TERM 953 1141572 - 1141534 - G 76 -7.3 -4.3467 | gap 1, opp_overlap 1141546 AGCCGGAGACCAAAA GGGCGAGG-TCGGGCCTT CCCG AGGGCTTGATCCCCGCCC GGGTGGCCCCCGCCC argC 1142643 - 1141606 - | N-acetyl-gamma-glutamyl-phosphate reductase TTHA1198 1143161 - 1142646 - | hypothetical protein TTHA1199 1144071 - 1143166 - | ornithine carbamoyltransferase TERM 954 1143649 - 1143630 - G 79 -7.2 -4.58283 | gap 1 CAAGCCCCCCAAAAA CCTCCTTCA GGG TGA-GGAGG TCCGCCAGGGCCTGG TTHA1200 1144798 - 1144115 - | hypothetical protein TERM 955 1144394 - 1144375 - G 90 -10 -4.77165 | opp_overlap 1144392, overlap 1144392 CCGGGTAGAAGAAAA GCCTCTCC ACCC GGAAAGGC TCCCCCTCCAAGGGG TTHA1201 1145132 - 1144791 - | hypothetical protein TTHA1202 1145412 - 1145122 - | hypothetical protein TTHA1203 1146021 - 1145422 - | hypothetical protein TTHA1204 1146867 - 1146094 - | hypothetical protein TERM 956 1146174 - 1146139 - G 74 -4.4 -4.59773 | overlap 1146140 1146159 GGCCAGGCGGAAAAA CCCCCGGGCCAGGGCC AAAA GGCCAAGGGCGAGGAG GAAGGCGGCAAAGGG TERM 957 1146211 - 1146159 - G 71 -8.2 -4.11216 | gap 1, overlap 1146139 1146187 1146188 GGGCCAGGGCCAAAA GGCCAAGGGCGAGGAGGAAGGCGGC AAAG GGGGCCTCTCCCCTC-CCCAGGGCC GCTTCCGCGGGCACG TERM 958 1146868 - 1146843 - G 83 -3.1 -4.91511 | AGGTGAGGAGAAAAA GGCGCAAAACC CGGA GGTAGCGCACC CTCCCAAGGTAGACT TTHA1205 1146894 - 1147889 + | ABC transporter, ATP-binding protein TTHA1206 1147946 - 1148722 + | hypothetical protein TTHA1207 1148730 - 1149254 + | hypothetical protein TTHA1208 1150809 - 1149235 - | alpha-isopropylmalate/homocitrate synthase family transferase TERM 959 1149669 - 1149625 - G 82 -15 -3.67517 | gap 1 GACGAAGACGCTAAA GCCCTCCACGCTGAAGGGAAG GCTC CCGCCCTTCAG-GCGGTGGGC GAGGAGGTAGAAGCT TTHA1209 1151330 - 1150803 - | acetyltransferase TTHA1210 1152918 - 1151356 - | 2-isopropylmalate synthase TERM 960 1151736 - 1151722 - G 83 -5.7 -4.84359 | GGAGCCCGAGAAAAA CTGGA CATGC TCCAG CTGGAAGAAGTGGGA TERM 961 1151883 - 1151896 + g 75 -5.9 -4.56597 | GGTCCTTGTAGCCCA GGTCC TCGA GGGCC TTTTTAAAAGCCGCC TTHA1211 1153989 - 1152976 - | ketol-acid reductoisomerase TTHA1212 1154498 - 1153986 - | acetolactate synthase 3 regulatory subunit TTHA1213 1156183 - 1154495 - | acetolactate synthase, large subunit TERM 962 1156224 - 1156206 - R 79 -13.1 -3.71649 | opp_overlap 1156206 1156205 TCCTTAAACTTGAAA CCCCCGG TTGGC CCGGGGG GTTATGGGATGCGCC TTHA1214 1156316 - 1156248 - | hypothetical protein TTHA1215 1157318 - 1156338 - | thioredoxin reductase TERM 963 1156532 - 1156551 + g 71 -15 -3.02144 | opp_overlap 1156547 CCTCGTAGGCCACCC CCGCCTCC CTAA GGAGGCGG TCTTCCGCCCGGTAG TTHA1216 1157476 - 1157946 + | prepilin-like protein TTHA1217 1158001 - 1158468 + | prepilin-like protein TTHA1218 1158455 - 1158826 + | prepilin-like protein TTHA1219 1158823 - 1159533 + | general secretion pathway protein J TTHA1220 1159547 - 1161046 + | hypothetical protein TTHA1221 1161319 - 1161687 + | pilin, type IV, putative TERM 964 1161711 - 1161730 + F 100 -15 -4.87665 | opp_overlap 1161711 CCTAAGTTAGTTAAA GGGTCGGG TGTT CCCGACCC TTTTTCTCAATACGG TERM 965 1161730 - 1161711 - f 83 -15 -3.68619 | opp_overlap 1161711 CCTAAGTTAGTTAAA GGGTCGGG TGTT CCCGACCC TTTTTCTCAATACGG TTHA1222 1161746 - 1162117 + | pilin, type IV, putative TTHA1223 1162310 - 1163071 + | hypothetical protein TTHA1225 1164238 - 1163681 - | hypothetical protein TTHA1224 1163147 - 1163848 + | hypothetical protein TTHA1226 1164913 - 1164257 - | hypothetical protein TERM 966 1164672 - 1164708 + g 85 -16.6 -3.53091 | overlap 1164670 1164670 AGGACCTGGACCAGG GGGGCCTCCTCCCC TTCCTCCTT GGGGAGGAGGGCCC TTTCCGGGGAGAGCT TTHA1227 1165923 - 1164910 - | tryptophanyl-tRNA synthetase TERM 967 1165947 - 1165964 + H 77 -14.1 -3.40403 | opp_overlap 1165911 1165943 TGTAGCAAAAGCTTA GGCCCCC TCGC GGGGGCC TTCTGGTGCCGGGGG TERM 968 1166202 - 1166227 + H 100 -17.5 -4.18018 | ATGGCCGTCGCGTAT CCCCCGGGCCC CAAA GGACCCGGGGG TTTTGCGTAAGGGGG TERM 969 1166318 - 1166307 - g 76 -3.6 -4.67904 | GAGGAAGCTCAAAAA CGGC CAAA GCCA GCTCTTCATAGACCT TTHA1228 1166248 - 1167666 + | isopropylmalate isomerase large subunit TERM 970 1168154 - 1168124 - g 71 -8.8 -4.1552 | opp_overlap 1168122 1168136 GACCTGGTGAACAAA GAGGTGCGCTTCGG GGA CCGCACCGCTCCCC TCTTCATCCGGGAAG TTHA1229 1167680 - 1168285 + | 3-isopropylmalate dehydratase small subunit TTHA1230 1168282 - 1169319 + | 3-isopropylmalate dehydrogenase TTHA1231 1169329 - 1169868 + | hypothetical protein TTHA1232 1169865 - 1170398 + | hypothetical protein TERM 971 1171054 - 1171028 - g 75 -15.2 -3.30741 | opp_overlap 1171052, overlap 1171021 1171022 AGCTACAAGGAGGAA GGCCTCCTCC TCACCCC GGAGGAGGCC GCGAGGGCCCTGGTG TTHA1233 1170395 - 1171129 + | short-chain dehydrogenase/reductase family protein TTHA1234 1171126 - 1172793 + | dihydroxy-acid dehydratase TERM 972 1172806 - 1172836 + T 100 -12.4 -4.371 | overlap 1172799 1172798 1172807 TAGGGCCTCTGGATC CGGTCCGGGGCCAG GTT CTGGCCCCGCTCCC TTTTGATGTCCTCGG TERM 973 1172807 - 1172835 + T 80 -15.9 -3.21778 | overlap 1172799 1172798 1172806 AGGGCCTCTGGATCC GGTCCGGGGCCAG GTT CTGGCCCCGCTCC CTTTTGATGTCCTCG TTHA1235 1173176 - 1172790 - | cytochrome c-552 precursor (C552) TERM 974 1173074 - 1173020 - G 70 -12.6 -3.34715 | gap 1, overlap 1173018 CAGGGGTCCTAAAGA GGGGGGCCGCCGCCTCGAGGCCCGG GTAGGG CCGCGCCCCCTGG-GCCCGCCCCCC GTGGCACTGGGCGCA TERM 975 1173181 - 1173140 - G 80 -11.5 -4.07568 | opp_overlap 1173111 1173149 1173152, overlap 1173104 GCCCCTGGGCGAAAA GGCCCAGGAGGAGGGCC AGGACCAG GGCCTTCTTCATGGGCC CAGTATACGCCCGGC TTHA1236 1173482 - 1173213 - | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein TTHA1237 1174267 - 1173470 - | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein TTHA1238 1175043 - 1174264 - | spermidine/putrescine ABC transporter, permease protein TTHA1239 1175900 - 1175040 - | spermidine/putrescine ABC transporter, permease protein TTHA1240 1177011 - 1175893 - | spermidine/putrescine ABC transporter, ATP-binding protein TERM 976 1176613 - 1176645 + g 70 -9.8 -3.78775 | overlap 1176614 CTCCAACGCCCAGGC CACCTTCTCCCGGA TGGCC TCCGGGGGAAGGCC TTTCATCCTGAGGCC TTHA1241 1178102 - 1177023 - | rod shape determining protein RodA TTHA1242 1178335 - 1178114 - | cell division inhibitor MinE TERM 977 1178407 - 1178350 - R 83 -15.5 -3.57792 | gap 1, overlap 1178353 1178373 TCACCGACCCCCAAA GAGGCGCTTCAGCACCC-CGAGAAGGCC CTG GGCGTCCTCGAGGGCGCGGAAGGGCACC TCCTCGCCCCGGAGG TERM 978 1178404 - 1178353 - R 85 -18 -2.61695 | gap 1, overlap 1178350 1178373 CCGACCCCCAAAGAG GCGCTTCAGCACCC-CGAGAAGGCC CTG GGCGTCCTCGAGGGCGCGGAAGGGC ACCTCCTCGCCCCGG TTHA1243 1179138 - 1178335 - | septum site-determining protein MinD TERM 979 1178431 - 1178373 - G 70 -12.4 -3.31792 | gap 3, overlap 1178353 1178350 TCAGCACCCCGAGAA GGCCCTGGGCGTCCTCGAGGGCGCGGAAG GGCA CCTCCTCGCCCCGGAGG-CG-CC-GCGCC GTGTCCATGTAGGCC TTHA1244 1179440 - 1179135 - | hypothetical protein TTHA1245 1179522 - 1179659 + | hypothetical protein TTHA1246 1179669 - 1181213 + | methylmalonyl-CoA mutase TTHA1247 1181222 - 1181608 + | hypothetical protein TERM 980 1181628 - 1181593 - T 93 -19 -3.31144 | gap 1, opp_overlap 1181623, overlap 1181595 1181596 GGTGCACGTGCACAA GAGCCC-GGCGGGGTGA AGG CCACCCCGCCGGGGCGC GGCGCCCGTGGGGCT TERM 981 1181625 - 1181595 - T 100 -20.4 -3.22475 | opp_overlap 1181623, overlap 1181593 1181596 TGCACGTGCACAAGA GCCCGGCGGGGTGA AGG CCACCCCGCCGGGG CGCGGCGCCCGTGGG TERM 982 1181624 - 1181596 - T 100 -23.9 -2.53271 | opp_overlap 1181623, overlap 1181595 1181593 GCACGTGCACAAGAG CCCGGCGGGGTGA AGG CCACCCCGCCGGG GCGCGGCGCCCGTGG TTHA1248 1183589 - 1181643 - | acetyl-coenzyme A synthetase TERM 983 1183855 - 1183884 + G 80 -17.3 -3.21099 | gap 1 CTCTCCTCCGCCTAC GCCCTCCTCCA-CA GCC TGATGGAGGAGGGC TTCGTGGTGAAGGAG TTHA1249 1183723 - 1186257 + | acetyl-coenzyme A synthetase TERM 984 1186571 - 1186555 - g 74 -7.9 -4.25104 | opp_overlap 1186555 CGGCCGGGAGGAAAA GCTCACC TAC GGGGAGC TTCTGGACCGGGTGC TTHA1250 1186235 - 1188118 + | acetyl-coenzyme A synthetase TERM 985 1188145 - 1188181 + T 77 -16.6 -2.66373 | gap 1, overlap 1188142 1188141 TTGGGCTGCCTTTCC GG-GGCCCCAGGCTGGC CCAA GCCAGCCTGGGGTGGCC TCACTTCTTCCGCTT TTHA1251 1191175 - 1188182 - | preprotein translocase subunit SecA TERM 986 1189207 - 1189195 - G 76 -9.1 -4.30576 | TGCCGATGATGAAAA GCCCT CCC AGGGC CCGGACCCGCTCCTC TERM 987 1191264 - 1191210 - R 81 -11.5 -3.96148 | gap 1, opp_overlap 1191199, overlap 1191211 1191223 1191261 CTTCGGGATGAGAAA CCCCTTTA-TACCACCCCATGCTGGC TTGC GCCAGCATGGGGCCCCGGTAAAGGGA CCTCGTGCCCCAATC TERM 988 1191250 - 1191223 - R 100 -21.4 -2.62515 | overlap 1191211 1191210 AACCCCTTTATACCA CCCCATGCTGGC TTGC GCCAGCATGGGG CCCCGGTAAAGGGAC TTHA1252 1192287 - 1191316 - | O-sialoglycoprotein endopeptidase TERM 989 1191493 - 1191452 - G 74 -7.9 -4.25104 | gap 1, overlap 1191435 1191453 CCCCGGGGAGGAAAA TGCACCTCCAGGCCCGCCTC CTT GAAGCGCTCCTGGAG-CGCC CGGTTCGCCGCCACC TERM 990 1191624 - 1191649 + g 70 -12.5 -3.36273 | overlap 1191613 1191612 GGGCGGCCTTGGGAA GGCCCTTCTCC ACCA GGTGGAGGGCC TTGGTCTTGAGCCCG TERM 991 1192105 - 1192132 + g 72 -12 -3.68351 | GCCCGCCTCGGCCAG GGCCCTCTCC ACGAGGAG GGGGAGGGCC TTTAAGTGCTCGCGG TERM 992 1193567 - 1193515 - g 84 -18.9 -2.78384 | opp_overlap 1193515 1193528 1193535 TCGCCCCCGAGGAGA CCCTCCTCCCCACCCCCGAGGCGGG CTT CCTCCCCCGGGAACGGGGGGGCGGG GGACGGCTTTTCGCC TTHA1253 1192323 - 1193639 + | hypothetical protein TTHA1254 1193647 - 1194072 + | hypothetical protein TTHA1255 1194080 - 1194289 + | hypothetical protein TTHA1256 1194609 - 1194286 - | hypothetical protein TERM 993 1194865 - 1194824 - g 72 -12.9 -3.56594 | gap 1 GCAAAGGGCCCTAAA GCGGGTGGAGGCGGGGGCCA ACG TGGTCCTCGCCTAC-CCCAC CGCCGCCGGGAAAAG TERM 994 1194895 - 1194880 - g 77 -10.4 -4.07568 | CCGCCGCCGGGAAAA GCCTGG TCTA CCAGGC CCCGGTGCTCCAGGC TERM 995 1196802 - 1196768 - g 78 -2.7 -4.84359 | gap 1, overlap 1196770 GTACCTGGACAAAAA GGCGGCCC-TGGCC CTCGCCTT GGCCTTGGCCCACC CCTTAGACTGAGAAG TTHA1257 1194627 - 1196813 + | putative helicase TTHA1258 1196819 - 1197220 + | hypothetical protein TERM 996 1198775 - 1198755 - gf 85 -10.3 -4.25104 | opp_overlap 1198768 CCCCCTCTACCAAAA GGCGGAGGG GCT CGCCCCGCC CGGCTGGCGGGCCTC TERM 997 1199618 - 1199588 - gf 74 -5.3 -4.45485 | opp_overlap 1199611, overlap 1199579 ACCACACCCACAAAA CGGGCTTCCTC GTCCACCTG GAGGTGGCCCG CCTCCTCCGGGCCCA TERM 998 1199658 - 1199668 + GF 72 -6.8 -4.19238 | overlap 1199611 GGAGACGGGGGAGCG GGTG GAC CACC TTTTGGGCTTCGCCC TTHA1259 1197217 - 1199832 + | adenylate cyclase related protein TERM 999 1200505 - 1200563 + GT 85 -18.1 -2.60813 | gap 2, overlap 1200506 AGCAGGAGGTCCTCT TCGC-CTACCCCGA-GGCCCGGCCCGCCT TGA GGGAGGGCCGGGCCATCGTGGTGGAGGGG CTCTTTGACGCCATC TERM 1000 1200843 - 1200823 - gT 70 -13.3 -3.06183 | opp_overlap 1200834, overlap 1200839 TCCACCCCGAGGGAA GGGCCCTCT TCC AGAAGGCCC TGGAGGAGGCCCTCC TERM 1001 1201555 - 1201523 - gT 76 -15.6 -2.87132 | gap 1, opp_overlap 1201524, overlap 1201544 CCGGGTGGCCATAGA GGCGGAGCGCCGCCT CTAC AAGCGGCGCCCC-CC TCCTTCGGGCTGGTC TTHA1260 1199805 - 1201577 + | DNA primase TTHA1261 1203076 - 1201574 - | 4-alpha-glucanotransferase (amylomaltase) (disproportionating enzyme) (D-enzyme) TERM 1002 1202699 - 1202723 + g 82 -10 -4.4078 | overlap 1202678 CCGGAAGGCGGCGAA GGCCTCCC GCTCCTCCG GGGAGGCC TTTTCCTTGAAGCCC TERM 1003 1203007 - 1202984 - G 76 -16 -3.19157 | GAGGAAGCGGAGGAA GTCCCGGGCC TCCT GGCCCAGGAC GCCGACGCCGTAGGG TTHA1262 1204037 - 1203165 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 1004 1203261 - 1203230 - G 85 -13.6 -4.07568 | CCTTGCGGCCCAAAA GCCCCGCCTGCACC ATGC GGCGGAGGAGGGGC GAAGGCCGGTACTTG TTHA1263 1204912 - 1204058 - | hypothetical protein TERM 1005 1204508 - 1204466 - G 87 -8.3 -4.78107 | gap 1 GAGGAGGATCAAAAA GGCCCCGGGGCTGAGGCG CACCCCCC CACC-CTCCCCCAGGGCC AGAACCAAAGCCCCA TERM 1006 1204734 - 1204714 - G 71 -6.8 -4.30844 | gap 1, overlap 1204716 ACCCGAGGAGGAAAA GGCGGG-GA AGGT CCTCCCGCC TCGGAGGAGGAAGCC TTHA1264 1206122 - 1204902 - | putative zinc protease TERM 1007 1205238 - 1205291 + g 70 -10.2 -3.85698 | opp_overlap 1205274 GACGTAGGCGTGGAA GGTCCCGGCCCGGTCGGCCTCC-TCG AGGC CGAAGGAGGCC-ACCTCGGCGAGGCC TTTGTCCACCAGGGC TTHA1265 1207326 - 1206115 - | zinc-dependent peptidase TERM 1008 1209025 - 1209000 - g 86 -14.7 -3.90318 | opp_overlap 1209001 GGAGGAGGTGAGAAA GGGCCACCAGG TCTT CGTGGTGGCCC CGGCCATTGAGGAGA TERM 1009 1209137 - 1209091 - g 79 -13.7 -3.62572 | gap 2 TACGAGGAGCTTAAA GGCCTCCTCCC-TGG-GGTGCGC CTG GCCCTCCTCCACGGGAGGATGCC CGCCCGGGAGAAGGA TTHA1266 1207342 - 1209654 + | DNA helicase RecG TTHA1267 1209654 - 1210430 + | hypothetical protein TTHA1268 1211028 - 1210384 - | hypothetical protein TERM 1010 1210607 - 1210554 - Gf 74 -15.7 -2.64274 | opp_overlap 1210552 1210589 1210600, overlap 1210551 1210550 AGGCCGGGAAACCCA CCGCCCGCTCGGCCGCCACGGCCCA CTCC CGGGCCGTGGCCTCGCTGGGGGCGG CCTCCTTCTTCATGA TERM 1011 1210818 - 1210840 + gF 84 -5.6 -4.87665 | gap 1, overlap 1210810 CCCCCACCCCGGCGT CGCCGCAGA CCGCGA TCTG-GGCG TTTTTGTAGGTGGCG TTHA1269 1211008 - 1212228 + | transposase TTHA1270 1212640 - 1212212 - | V-type ATP synthase, subunit (VTPJ-THERM) TERM 1012 1212719 - 1212694 - R 100 -19.7 -5.06414 | CCGGGTCAAGAAAAA GCCCGGGGGGC CTGA ACCCCCCGGGC CCCTCTAGGGGGCTT TTHA1271 1213404 - 1212733 - | V-type ATP synthase subunit D TTHA1272 1214851 - 1213415 - | V-type ATP synthase subunit B TTHA1273 1216598 - 1214862 - | V-type ATP synthase subunit A TTHA1274 1216925 - 1216611 - | V-type ATP synthase subunit F TTHA1275 1217899 - 1216928 - | V-type ATP synthase subunit TERM 1013 1217952 - 1217914 - R 78 -13.8 -3.57144 | TCGTCTAGCCCCAAA GCGCCTGGGCCACCTT GGAGGAA AGGGCGTCCCAGGCGC GGTCAAGCCGGGCGA TTHA1276 1218469 - 1217903 - | V-type ATP synthase subunit E TTHA1277 1218828 - 1218529 - | V-type ATP synthase, subunit K TTHA1278 1220801 - 1218843 - | V-type ATP synthase subunit I TERM 1014 1220274 - 1220223 - G 72 -15.8 -2.71712 | gap 1, overlap 1220222 CCCCGCCCGGGAAAG GGCCGCCTTGGC-CTGGTCCACCTC CTT GCGGTGGACCACCACCAGGGCCGCC ACCCCGCCCGCGTAG TTHA1279 1221160 - 1220798 - | V-type ATP synthase, subunit (VAPC-THERM) TTHA1280 1221215 - 1222363 + | hypothetical protein TTHA1281 1222373 - 1222582 + | hypothetical protein TTHA1282 1222579 - 1222932 + | hypothetical protein TTHA1283 1222960 - 1223634 + | hypothetical protein TTHA1284 1223654 - 1224268 + | serine/threonine protein kinase, putative TERM 1015 1225013 - 1224956 - g 95 -14.7 -4.18018 | gap 1 GGCGGGGACGGAAAA GGTGGCCGTGGTCCGCCGCCTCGGCC TCCCCCT GGAGGAGGAGGCGGACCTCG-CCGCC CTCGCCGGCCCCCTC TTHA1285 1224327 - 1226216 + | acetyl-coenzyme A synthetase TTHA1286 1227687 - 1226194 - | virulence factor-related protein TERM 1016 1226510 - 1226478 - G 72 -5.4 -4.3586 | gap 1, overlap 1226460 1226479 CCAGGTAGAGGAAAA GCCCCACC-CAGCCC GCCA GGGCCGTGGAGAGGT TGAGGAGGAAAAGCC TERM 1017 1227010 - 1226998 - G 72 -3.3 -4.60487 | GACCAGGTTCAAAAA CTGCC GGA GGGAG GTGGTGAAGGCGAAG TERM 1018 1227258 - 1227235 - G 81 -12.4 -3.89346 | GGCGTAGGGCAGAAA GCGCTCCTCC GCCT GGAGGAGGGC GGAGAAGAGGGCCGC TTHA1287 1228708 - 1227680 - | hypothetical protein TERM 1019 1227824 - 1227806 - G 85 -4.5 -4.94972 | opp_overlap 1227793 1227812 1227823, overlap 1227799 1227807 GAGGAGAACCAAAAA GCTCTCC TTCTG GGAGAGG CCCAGGACCTTCTTC TTHA1288 1231624 - 1228724 - | exonuclease SbcC TERM 1020 1229234 - 1229200 - G 72 -13.4 -3.53444 | opp_overlap 1229233 CGAGCTTCTCCCAAA GGGCGAGCTCGGCCAC GAG GCGGGCGAGCGCCCCC TCCACCTCCCGGCGG TERM 1021 1231213 - 1231199 - G 72 -11.4 -3.58037 | GAGGAAGCGGTCAAA CTCCCC CTG GGGGAG GAGGAGGGCCCGGGT TTHA1289 1232723 - 1231605 - | exonuclease SbcD TTHA1290 1233754 - 1232078 - | hypothetical protein TTHA1291 1233012 - 1232743 - | putative membrane protein [C-terminal] TTHA1292 1233813 - 1234181 + | metal uptake regulation protein, putative TTHA1293 1234628 - 1234200 - | hypothetical protein TERM 1022 1234451 - 1234404 - G 85 -15.1 -3.737 | overlap 1234406 CAACCGGGGAGGAAA GACCATGTACCCC-AGAACGAGC ATCC GCTCGTCCTCGGGGTAGATGG-C GAGCTCCCGCCCCCA TERM 1023 1234450 - 1234406 - G 93 -18.8 -3.45027 | gap 1, overlap 1234404 ACCGGGGAGGAAAGA CCATGTACCCC-AGAACGAGC ATCC GCTCGTCCTCGGGGTAGATGG CGAGCTCCCGCCCCC TERM 1024 1234642 - 1234603 - G 76 -16.4 -3.21395 | overlap 1234601 1234604 AGCCTGGGCATAAGA CCTCCCCGGGGCCAGT CTACCGCC ACCGGCCCCGGGGCGA AGGTGGCCTGGAGCT TERM 1025 1234641 - 1234604 - G 78 -17.7 -2.52623 | overlap 1234603 1234601 GCCTGGGCATAAGAC CTCCCCGGGGCCAGT CTACCGCC ACCGGCCCCGGGGCG AAGGTGGCCTGGAGC TTHA1294 1235217 - 1234657 - | ribosomal subunit interface protein TERM 1026 1235112 - 1235146 + g 70 -10.1 -3.79906 | CCACCTTGGCCATGA GCTC-CCCGTCCTGG TAGCGGT CCAGG-CGGGCGAGC TTCTTCTCCACGTAG TTHA1295 1235942 - 1235214 - | cell-division ATP-binding protein FtsE TTHA1296 1236008 - 1237327 + | carboxyl-terminal protease TERM 1027 1237340 - 1237371 + T 88 -16.6 -3.65812 | opp_overlap 1237339 1237355 TAGGCGCCACACGAT CCTGGGGGGCCT AAACCCGA GGGCCCCCCAGG TTCTCTTCCAGGAAA TTHA1297 1237694 - 1237350 - | hypothetical protein TTHA1298 1239665 - 1237809 - | methionyl-tRNA synthetase TERM 1028 1239702 - 1239685 - R 100 -14.1 -5.75342 | opp_overlap 1239688 CCTCCCTAAAAAAAA CCGGGGC ACGC GCCCCGG GCGGGGAAGCCTCCC TTHA1299 1240439 - 1239756 - | ribose 5-phosphate isomerase TERM 1029 1239801 - 1239784 - G 77 -10.5 -4.13767 | TCCTCCACCCCAAAA GGCCCCG CCAC CAGGGCC CGGGTGGCCATCCCC TTHA1300 1240915 - 1240439 - | bacterioferritin comigratory protein, thiol peroxidase, putative TERM 1030 1240858 - 1240813 - G 84 -14.1 -3.9941 | gap 3 TGGGGTAGAAGTAAA GGAC-CACCCACCGCC-C-CCG GTAGT CGGAGAGGCGGTGGGTGCGGCC CTCCTGGTCAGGCAG TTHA1301 1242094 - 1240955 - | hypothetical protein TERM 1031 1242151 - 1242115 - R 95 -18.6 -3.53012 | CCTCCCCCGCTCAAA GGGCTGGCCCAGGGCC TTGGG GGCCCGGGACCGGCCC GAGAGCGCCAGGACC TTHA1302 1242930 - 1242097 - | sugar ABC transporter, permease protein TTHA1303 1243979 - 1242930 - | sugar ABC transporter, permease protein TERM 1032 1243947 - 1243889 - G 72 -16.1 -2.73994 | overlap 1243886 1243920 AGGCCCGGAAGAGGA CCCCCAAGGCCATGAGGGCC-ATCCCCAC GAA GAGGGCATAGGCCCCCACGACCTTGA-GG GGCCGGGGCGCGGGG TTHA1304 1245445 - 1243976 - | sugar ABC transporter, ATP-binding protein TTHA1305 1246028 - 1245471 - | molybdopterin-guanine dinucleotide biosynthesis protein A TTHA1306 1246907 - 1246038 - | hypothetical protein TERM 1033 1246878 - 1246844 - G 73 -16.5 -2.90496 | gap 2, overlap 1246841 CCCTTTCCCAAAGGA GGCGGGCCAGGGTGAGC CCC GC-CACCCCGGCCC-CC AGGACCACCACCTCG TTHA1307 1247243 - 1246911 - | hypothetical protein TERM 1034 1247003 - 1246973 - G 74 -9.8 -4.08692 | overlap 1247001 1247002 CAAGCCCTTCCAAAA GCCTTTCCGCCT CCTCCTC AGGCAAAAAGGC CGAGAGGTCCCCCGG TERM 1035 1247020 - 1247001 - G 76 -3.4 -4.65895 | overlap 1246973 1247002 1247003 CTCCTCAGGCAAAAA GGCCGAGA GGTC CCCCGGGC GCAAAACCCCGCCCC TTHA1308 1248651 - 1247254 - | hypothetical protein TTHA1309 1248650 - 1248856 + | hypothetical protein TTHA1310 1249923 - 1248850 - | hypothetical protein TTHA1311 1249942 - 1250781 + | hypothetical protein TTHA1312 1250792 - 1251418 + | uracil phosphoribosyltransferase TERM 1036 1251463 - 1251491 + G 74 -2.2 -4.72986 | overlap 1251461 TGGCCAACCCCTACG GGCGGGGCTGGC TCACC GTCCTCCTCGTC TTTTTCCTGGCCCTC TTHA1313 1251405 - 1252505 + | hypothetical protein TTHA1314 1252490 - 1253620 + | UDP-N-acetylglucosamine 2-epimerase TTHA1315 1254794 - 1253595 - | putative integral membrane efflux protein TERM 1037 1255431 - 1255471 + G 79 -16.7 -3.04792 | opp_overlap 1255407 CCAGGCCACGCGCCA GGCCGTGGCCCTGAGCCAG GCC CTGGCCTGGGCCCTCGGCC TCTTCGGCCTCCTCG TERM 1038 1255716 - 1255774 + G 90 -21.6 -2.71364 | gap 1 GGGCCGCATCCTGGG GGTGGTGGGCCTCGAGGGCCTGGAGGG GGCGAA CCC-CCTGGACCCCGTGGCCCGCCACC TCCTTCCCCCCCTCC TTHA1316 1254862 - 1255974 + | hypothetical protein TERM 1039 1256113 - 1256157 + F 79 -8.4 -4.30576 | gap 1, overlap 1256126 CGGGGGCGTCTAAGC GGGTCTCCA-CGGGGGCCCCG GGCT CGGGGACGGAGGTGGAGGCCC TTTTGGTCCTCGAGG TERM 1040 1256126 - 1256181 + F 89 -16.8 -3.53091 | gap 1, overlap 1256113 GCGGGTCTCCACGGG GGCCC-CGGGCTCGGGGACGGAGGTGG AGG CCCTTTTGGTCCTCGAGGCCGCGGGCC TTTCCCCCAAGGACT TTHA1317 1256148 - 1256684 + | immunogenic protein related protein TERM 1041 1256701 - 1256732 + G 86 -15 -4.02817 | overlap 1256702 GCTCCCCTTCCGCCC CCTCCCCCTGGGCC TTCT GGCCCTGGGGGGGC TTCTTCTTCTGCGCC TERM 1042 1256702 - 1256731 + G 81 -18.5 -3.01208 | overlap 1256701 CTCCCCTTCCGCCCC CTCCCCCTGGGCC TTCT GGCCCTGGGGGGG CTTCTTCTTCTGCGC TTHA1318 1256681 - 1257079 + | hypothetical protein TTHA1319 1257626 - 1257051 - | acetyltransferase TTHA1320 1258841 - 1257627 - | periplasmic serine protease TTHA1321 1259745 - 1258888 - | formyltetrahydrofolate deformylase TERM 1043 1260174 - 1260186 + Gr 79 -7.7 -4.44667 | overlap 1260158 TCTCGGGGTAGAGGT GCTTC CGG GAAGC TTTCTTCTTGCGGAC TTHA1323 1261789 - 1260152 - | DNA mismatch repair protein MutL TTHA1322 1259764 - 1260258 + | ribonuclease activity regulator protein RraA TERM 1044 1260259 - 1260291 + gT 74 -15 -3.05384 | gap 1, opp_overlap 1260283, overlap 1260250 CGAAGCGGCGGATGA GGTCC-TCCTCCTTG AGGG CAAGGAGGACGGGCC TTCCGTGGGGGCAGG TERM 1045 1261404 - 1261360 - GT 95 -14.7 -4.25104 | CCTCCCCGAGGAAAA GCCCCTCCACCTCCACCCGGG TCC CCGGGGGGGCGGGGACGGGGC GCACCTCCACCCGCT TTHA1324 1264245 - 1261786 - | DNA mismatch repair protein TTHA1325 1264389 - 1265612 + | putaitve sulfite oxidase TERM 1046 1265620 - 1265643 + F 100 -21 -3.86015 | opp_overlap 1265614 1265615 TGGCCTAAAGGGCTT GGCCCCGGCC TTAG GGCCGGGGCC TTTGTGGGCCAGCTC TTHA1326 1265699 - 1266391 + | cytochrome c-552 like protein TTHA1327 1266388 - 1266831 + | hypothetical protein TERM 1047 1266870 - 1266847 - T 100 -19.6 -4.9445 | opp_overlap 1266844 1266854 AGAAGTAAGGAAAAA CCCCCGGGGA GGCC TCCCCGGGGG GCGTCCTTTCGGGCT TERM 1048 1266854 - 1266876 + T 70 -11.2 -3.57144 | opp_overlap 1266847, overlap 1266844 AGGAAAAACCCCCGG GGAGGCCTCC CCG GGGGGCGTCC TTTCGGGCTACACCC TTHA1328 1268542 - 1266884 - | 5'-nucleotidase precursor TERM 1049 1268296 - 1268318 + g 72 -3.2 -4.56597 | opp_overlap 1268293 1268314 TGCCCTGGAAGACGT CCCCGGCGTC CAG GAAGAGGGGG TTTTTCGCCCGGGCC TERM 1050 1268367 - 1268350 - G 72 -3.3 -4.57837 | gap 1, overlap 1268351 AGACGCGGTCAAAAA GGGCCACG CGC CG-GGCCA CGCCCCCCACGGGGG TTHA1329 1268723 - 1270063 + | glutamine synthetase TERM 1051 1270071 - 1270104 + F 78 -15.3 -3.14931 | overlap 1270066 1270064 1270061 CCTACTAGGCCGCCT GGGGTCAGGGCGC TTATCCTT GCGCCCTGACCCG TTGGTCACGCATAAA TERM 1052 1271206 - 1271175 - g 72 -11.5 -3.62522 | gap 1, overlap 1271157 1271149 1271148 CAACGGGGGCAAGAA GC-CCACCCGGGCC CAGGT GGCCCAGGAGGTGC GCAAGGTGAAGCTCG TTHA1330 1270201 - 1271364 + | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein TERM 1053 1271415 - 1271388 - f 100 -22.8 -3.59979 | overlap 1271404 1271407 GGGCCTGAGCCTAAA GGGGGTGGCTCC AAAA GGAGCCACCCCC TCGGCGGGAAAAAGG TTHA1331 1271439 - 1272407 + | branched-chain amino acid ABC transporter, permease protein TERM 1054 1273131 - 1273102 - g 70 -12.7 -3.28637 | opp_overlap 1273125 CATCAACATCACCAA CGGACCCCAGGGG ATCA CCCCCGTGGGCCG TCCCCCCATTGACTG TTHA1332 1272404 - 1273735 + | branched-chain amino acid ABC transporter, permease protein TTHA1333 1273732 - 1274358 + | hypothetical protein TTHA1334 1274009 - 1274512 + | branched-chain amino acid ABC transporter, ATP-binding protein TTHA1335 1274509 - 1275222 + | branched-chain amino acid ABC transporter, ATP-binding protein TTHA1336 1275289 - 1276794 + | peptide ABC transporter oligopeptide-binding protein TERM 1055 1276813 - 1276840 + F 74 -12.6 -3.55444 | overlap 1276801 1276815 AGGCCCTAGGAGCCG CCGCCCCGTGGG TATT CCCACGGGGCTA TTTCCGAGGTGGAGA TERM 1056 1276815 - 1276838 + F 100 -19.6 -3.35597 | overlap 1276801 1276813 GCCCTAGGAGCCGCC GCCCCGTGGG TATT CCCACGGGGC TATTTCCGAGGTGGA TTHA1337 1276855 - 1277775 + | peptide ABC transporter, permease protein TERM 1057 1277816 - 1277800 - g 79 -7.9 -4.56597 | overlap 1277802 CCGCTTTTGGAAAAA CCGCCTG TCC CAGGCCG GCCTCCTCCTCCTTG TTHA1338 1277768 - 1278787 + | ABC transporter permease protein TERM 1058 1279011 - 1279050 + G 72 -12 -3.64703 | gap 1, opp_overlap 1279028 CCCCTCCGCCTCGAG GCCCCCCAGGGGGAGAACC TCT GGGCCTTCCCC-GGGGCGC TTTGGGTGGAGGGAA TTHA1339 1278834 - 1279877 + | hypothetical protein TTHA1340 1281017 - 1279845 - | folyl-polyglutamate synthetase TERM 1059 1280335 - 1280279 - G 77 -10.8 -4.14392 | gap 2, opp_overlap 1280294 CGGGAAGGCCCAAAA GCCTCAGGGCGGCGGCGGCCAGGCGG GCGTTTT CCTCCTGGTAG--GCCCCCCTGAGGC CGGGCGGGGCGGGAA TERM 1060 1280708 - 1280682 - G 72 -12.2 -3.59979 | overlap 1280685 GGTGGCCAGGTCAAA GAAGCCCGGGGG CTC CTCCCAGGCCTC CTCCCTCGCCCAGGC TERM 1061 1280705 - 1280685 - G 75 -10.3 -3.9392 | overlap 1280682 GGCCAGGTCAAAGAA GCCCGGGGG CTC CTCCCAGGC CTCCTCCCTCGCCCA TTHA1341 1282820 - 1281018 - | ABC transporter, ATP-binding protein TERM 1062 1282323 - 1282311 - G 70 -2.6 -4.56597 | CTTGGGGCTCAAAAA CAGC ATGAA GCCG AGGAGGCCCACCAGG TTHA1342 1284553 - 1282817 - | ABC transporter, ATP-binding protein TERM 1063 1284596 - 1284570 - R 100 -19.5 -3.32844 | overlap 1284573 CCCTCTAGTGTACAA GAAGGGGCCGC CTCCT GCGGCCCCTTC CCCAAGCCCGCAGGC TERM 1064 1284593 - 1284573 - R 90 -15.4 -3.80733 | overlap 1284570 TCTAGTGTACAAGAA GGGGCCGC CTCCT GCGGCCCC TTCCCCAAGCCCGCA TTHA1343 1285747 - 1284614 - | citrate synthase TTHA1344 1286635 - 1285820 - | molybdopterin biosynthesis protein MoeB TERM 1065 1286762 - 1286789 + r 100 -21.4 -2.62184 | overlap 1286786 ACCTTTTGCCGGGGC CCCCATGCTGGC GCAA GCCAGCATGGGG TGGTATCACGCCCCC TTHA1345 1287559 - 1286795 - | putative mannose-6-phosphate isomerase TTHA1346 1287578 - 1288450 + | hypothetical protein TERM 1066 1288657 - 1288640 - g 74 -4 -4.60487 | TACGACCTGGAAAAA GGCCCC CTCCAC GTGGCC ACCGCCCTCCTCCCC TERM 1067 1288955 - 1288915 - g 71 -6.7 -4.25104 | overlap 1288916 CTTGCCCGAGGAAAA GGGGGCGGCGGTGCG CCTCCTCGCCC CGGACGGCCGCCCGC TGGGCTACGTCTACC TTHA1347 1288454 - 1289134 + | endonuclease V TTHA1348 1289140 - 1289781 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TTHA1349 1289898 - 1290191 + | DNA-binding protein HU (DNA-binding protein II) TTHA1350 1291058 - 1290216 - | hypothetical protein TTHA1351 1292063 - 1291065 - | M20/M25/M40 family peptidase TTHA1352 1292707 - 1292060 - | response regulator TERM 1068 1292178 - 1292143 - G 74 -9.9 -4.08692 | gap 1, opp_overlap 1292152 GAAGCTTCTGGAAAA TTTCCGA-AAGGCGGT TGCGC ACCGTCTTCTCGGAAA GCTGGAGCTCGGCGG TERM 1069 1292640 - 1292652 + g 71 -9.1 -4.08767 | CGGAAGTCCCCCTCG GCCTC CAG GAGGC TTTTCAGCCCCTGGC TERM 1070 1292895 - 1292873 - g 77 -4 -4.66833 | opp_overlap 1292852 GCCCAAGCGGAAAAA GGGCGCCC TCTTCCT GGAAGCCC CGGAGATCCTCGAGG TTHA1353 1292745 - 1293965 + | RNA methyltransferase TTHA1354 1294002 - 1294451 + | 3-dehydroquinate dehydratase TERM 1071 1296301 - 1296265 - g 93 -17.9 -4.13767 | opp_overlap 1296263 1296296 GCGTCCACGTGAAAA GCCTCCTCCCCCTCGCC GAG GACGAGGAGGTGGCGGC CCTCCTCTCCGTGCG TTHA1355 1294527 - 1296944 + | DNA gyrase subunit A TTHA1356 1296944 - 1297255 + | divalent cation tolerance protein (Cut A1) TERM 1072 1297267 - 1297305 + G 70 -10.2 -3.75024 | overlap 1297298 ATGACCCCGGACATG CTGGGCTTCCTCCGGG CCCTCCA CCAAGAGGGAGCCCGG TTCTTGGTCATCGGG TTHA1357 1297252 - 1297677 + | hypothetical protein TERM 1073 1297771 - 1297791 + G 83 -3.9 -5.00616 | overlap 1297773 TAGAGGAAAGGCTTC GCGCCGTTT GGG AGATGGCCC TTTTTTGGGCGAGGC TTHA1358 1297674 - 1297904 + | hypothetical protein TTHA1359 1297981 - 1298589 + | Crp/Fnr family transcriptional regulator TTHA1360 1298611 - 1299258 + | hypothetical protein TTHA1361 1299268 - 1299633 + | hypothetical protein TTHA1362 1299630 - 1300313 + | response regulator TTHA1363 1300314 - 1301567 + | sensor histidine kinase TTHA1364 1302641 - 1301628 - | hypothetical protein TERM 1074 1301837 - 1301825 - G 100 -6.2 -5.33405 | CCCAGGAAACAAAAA GCCC CACGC GGGC GTTCAGCTTGCCCAT TERM 1075 1302389 - 1302377 - G 80 -6.9 -4.64861 | CGCGCCCAAAATAAA CGACG GGC CGCCG CTTGGAGGGCAGGGC TTHA1365 1302731 - 1303441 + | putative iron-sulfur protein TTHA1366 1303431 - 1304819 + | putative iron-sulfur protein TTHA1367 1304809 - 1305372 + | hypothetical protein TTHA1368 1306181 - 1305375 - | signal peptidase I TERM 1076 1306145 - 1306113 - G 80 -6.8 -4.72272 | overlap 1306099 1306114 1306115 GGTGGTGACCAAAAA GGCCACCAGGAGGG CCTCC CCCACCTGGCGGAA CCACTCCTTGAACAA TTHA1369 1306933 - 1306178 - | phospholipase domain-containing protein TERM 1077 1306393 - 1306381 - G 77 -10.5 -4.11216 | opp_overlap 1306380 1306381 GGGCGAGGCCCAAAA CCCCC TCG GGGGG CTTTTCCACGCTCCG TTHA1370 1306976 - 1307737 + | serine/threonine-protein kinase-related protein TERM 1078 1307774 - 1307784 + G 71 -8.2 -4.08216 | CCTCTCCACCCTCTT GGGC TCG GCCC TTTTCGCGGGCCTGG TERM 1079 1308576 - 1308597 + G 76 -8.7 -4.26076 | gap 1, overlap 1308578 GGGTACTCCTACCGG GCCCTCTTCC AGG GGGAG-GGGC TTTTCCTGGACCTCG TTHA1371 1307742 - 1308770 + | hypothetical protein TTHA1372 1309849 - 1308767 - | N-acetylmuramoyl-L-alanine amidase TERM 1080 1310099 - 1310084 - g 84 -2.4 -5.07486 | overlap 1310085 1310088 CATGCGCAAGAAAAA GCAGCC CCTC GCCCGC TACCGGGTGGAGGTG TTHA1373 1309899 - 1310324 + | hypothetical protein TTHA1374 1310324 - 1311082 + | pantothenate kinase TTHA1375 1311419 - 1311045 - | hypothetical protein TERM 1081 1311643 - 1311666 + H 100 -15.3 -4.58773 | opp_overlap 1311634 1311631 CAAGGACGAGCCTGG CGCCCGCTC CAAAGT GAGCGGGCG TTTTGCTTTGGTGGG TERM 1082 1312134 - 1312112 - H 100 -19.2 -3.36273 | opp_overlap 1312112 1312130 CGCTGGGAATAGGAA GGAGGCCAGC TAA GCTGGCCTCC TTTTTCTTGCACCGG TERM 1083 1312112 - 1312134 + H 100 -19.2 -5.06414 | opp_overlap 1312112, overlap 1312130 CGCTGGGAATAGGAA GGAGGCCAGC TAA GCTGGCCTCC TTTTTCTTGCACCGG TERM 1084 1312197 - 1312222 + G 73 -6.7 -4.39386 | GGCCTTTAAACGCTT GGAGCTTCCCC CGCC GCGGGTGCTCC TTTTGGTCCTTTCGG TERM 1085 1312238 - 1312265 + G 85 -11.2 -4.39696 | overlap 1312227 1312237 TTTTGGTCCTTTCGG CCTTCCTGGGCT TCCT GGCCCTGGAGGG TTTCTTGCTTTGGGC TTHA1376 1312180 - 1313586 + | HD domain-containing protein TERM 1086 1314052 - 1314081 + G 70 -14.9 -2.94322 | overlap 1314049 1314039 AGGGCGGGGTCCGCC TGCGGCGGAGGGC CCTC GCCCTCCGCCTCC TCCTTTACCTCGCCT TTHA1377 1313637 - 1314128 + | hypothetical protein TTHA1378 1314183 - 1315187 + | homoisocitrate dehydrogenase TERM 1087 1315196 - 1315228 + F 100 -29.3 -4.59853 | opp_overlap 1315196 CCTGTAGGCGGGAAA GGCTTCCTGGCCCCC AAG GGGGGCCAGGAAGCC TTTTTAGGGGGTTGC TERM 1088 1315228 - 1315196 - f 100 -29.3 -3.55444 | opp_overlap 1315196 CCTGTAGGCGGGAAA GGCTTCCTGGCCCCC AAG GGGGGCCAGGAAGCC TTTTTAGGGGGTTGC TTHA1379 1315323 - 1316456 + | competence protein PilM TERM 1089 1316508 - 1316478 - g 75 -6 -4.56597 | gap 1, opp_overlap 1316499, overlap 1316479 1316480 CCTTCTCCCCAAAAA CCTCCGGCGCCGG GTGGAG CCGG-GCTGGTGG CGCCTCCTCGCCCTC TTHA1380 1316449 - 1317072 + | competence protein PilN TTHA1381 1317062 - 1317643 + | competence protein PilO TERM 1090 1318275 - 1318257 - g 76 -8.8 -4.25104 | overlap 1318258 1318269 CGGGCCCGAGGAAAA GGGGGC GGAGAAG GCCCCC ACCCCGGCCTCGCCG TERM 1091 1318336 - 1318314 - g 71 -8.3 -4.07568 | overlap 1318315 CCTGGTGGCGGAAAA GGGCCTCCG CCTCT CGGGGACCC TGCTCGGCCCCGTGA TTHA1382 1317640 - 1318518 + | competence protein PilW TTHA1383 1318515 - 1320788 + | general secretion pathway protein (PilQ) TERM 1092 1320808 - 1320827 + F 86 -16.4 -3.60805 | overlap 1320802 CCGGGCGTTCCGCAA GGGGGGCC CGTG GGCCCCCC TTTGGCCTACAATGT TTHA1384 1320847 - 1321998 + | chorismate synthase TERM 1093 1322347 - 1322316 - g 76 -7.8 -4.35524 | gap 1, overlap 1322309 CCCGGAAAGCCAAAA GGCCCTCCTCG-GCC GCG GGCCCGTGGTGGCCC TATGGGCGAGCCCCG TTHA1385 1322023 - 1322577 + | shikimate kinase TERM 1094 1322804 - 1322794 - g 71 -8.2 -4.07568 | CTGGCTTGCGGAAAA GGGG CTT CCCC GGAACGCCACCCTTC TERM 1095 1323343 - 1323362 + G 71 -9.2 -4.08216 | CGCCCTTCTGGGAAG GGCCCTCG GGGG CGAGGACC TTTTGCCCCCCGTGC TTHA1386 1322555 - 1323601 + | 3-dehydroquinate synthase TTHA1387 1325017 - 1323647 - | rRNA methylase TERM 1096 1324073 - 1324043 - G 79 -7.4 -4.56597 | overlap 1324044 1324045 1324052 CGCCTCCTCCAAAAA GCCCCTAAAGGCCC GCA GGGCCTCCTGGGAG AGGGGGGAAGGGCGT TERM 1097 1324871 - 1324829 - G 74 -7.6 -4.25104 | gap 1, opp_overlap 1324828 CTCGGGGTAGTAAAA CCCCTCCTGGCACC-AGGG AATGGG CCGTAGGGGCCAGGGGGAG ATCCTCTGAAAGGCC TERM 1098 1325128 - 1325157 + G 74 -4.8 -4.56597 | opp_overlap 1325119, overlap 1325129 TGGAAAGGCTCCTTT CCCGCCACGGGG AGAGGG CCTTGAGGCGGC TTTTTCACGAGGAGG TTHA1388 1325070 - 1325447 + | holo-[acyl carrier protein] synthase TTHA1389 1325778 - 1325425 - | hypothetical protein TTHA1390 1326350 - 1325775 - | acyltransferase family protein TERM 1099 1326395 - 1326416 + rH 91 -11.5 -4.25104 | opp_overlap 1326386, overlap 1326396 ACTAAAGGGTAACGC CGGGTGGGG CCTT CCCCACCCC TTTTCGTGGAGGGCG TERM 1100 1326396 - 1326415 + rH 76 -15 -3.14848 | opp_overlap 1326386, overlap 1326395 CTAAAGGGTAACGCC GGGTGGGG CCTT CCCCACCC CTTTTCGTGGAGGGC TERM 1101 1327266 - 1327285 + Gr 72 -5.7 -4.30576 | gap 1, opp_overlap 1327260, overlap 1327270 CGCCAACGAGGCCCT GGACCGGG GCAAG CCCG-TCC TTTTGGTCATCACCA TERM 1102 1327667 - 1327656 - gR 76 -3.6 -4.64598 | GAACTACCTGAAAAA CCGC ATCG GCGA GGACCTGGGCCTAAG engA 1326433 - 1327728 + | GTP-binding protein EngA TTHA1392 1328442 - 1327678 - | Sir2 family protein TERM 1103 1329857 - 1329814 - g 73 -13.6 -3.40403 | CCTGGCCGAGGAGAA GGGGGTGGGGCTCCTCGCCC GGGA GGTGGCGGAGGCCCTCCCCC GGGCAAGGAGGCTCC TTHA1393 1328465 - 1329913 + | hypothetical protein TTHA1394 1329948 - 1330826 + | homoserine kinase TTHA1395 1330811 - 1331551 + | hypothetical protein TTHA1396 1331636 - 1331553 - | 30S ribosomal protein Thx (S31) rpsT 1331966 - 1331646 - | 30S ribosomal protein S20 TTHA1398 1332404 - 1332027 - | hypothetical protein TTHA1399 1332427 - 1333725 + | tyrosyl-tRNA synthetase TERM 1104 1333743 - 1333774 + T 74 -12.8 -3.53811 | opp_overlap 1333761 1333762, overlap 1333745 CCACCCCTTCTTGGG GCCCCCGCCGAGGC GAAA GCCCCGGCGGGGTA TTTAGCCCCCCTCCA TERM 1105 1333745 - 1333772 + T 100 -19.8 -3.34715 | opp_overlap 1333761 1333762, overlap 1333743 ACCCCTTCTTGGGGC CCCCGCCGAGGC GAAA GCCCCGGCGGGG TATTTAGCCCCCCTC TTHA1400 1334330 - 1333776 - | cytochrome complex Rieske iron-sulfur subunit TERM 1106 1334301 - 1334280 - G 79 -5.7 -4.64598 | overlap 1334281 GAACCAGGCGAAAAA CCCCCCGGC CACC GCCACGGGA AGGTAGAAGACGAGG TTHA1401 1335313 - 1334333 - | cytochrome c family protein TERM 1107 1334704 - 1334689 - G 76 -8.2 -4.25104 | GGTTCCCCAGGAAAA GCCACC CTTC GGCGGC CTCGGGGTCGGCGCC TERM 1108 1335122 - 1335143 + g 72 -5.7 -4.36262 | overlap 1335125 CCTTTCCACCTCCAC CATGCGGGC GAGG GCCCGCTTC TTTTCCTCTCCCTCT TERM 1109 1335125 - 1335140 + g 87 -11.8 -4.29302 | overlap 1335122 TTCCACCTCCACCAT GCGGGC GAGG GCCCGC TTCTTTTCCTCTCCC TTHA1402 1335729 - 1335310 - | cytochrome c-type biogenesis protein TERM 1110 1335464 - 1335415 - G 71 -15.8 -2.66216 | gap 1, overlap 1335414 GCCGAGGAGGAGAAG CCCCAAGACGGGGAGC-ACCC AGACCCAAA GGGTCACCCCCCGCCTCGGGG GCGCGTAGAGGATCC TTHA1403 1336262 - 1335726 - | cytochrome c biogenesis protein, thiol:disulfide interchange protein TERM 1111 1336229 - 1336217 - G 78 -9.1 -4.46212 | TCCCCCACCAGAAAA GCCCT CCC AGGGC CAATACCACGAGGAG TTHA1404 1338190 - 1336259 - | cytochrome c-type biogenesis protein CcmF TERM 1112 1336970 - 1336939 - G 85 -13.7 -4.08216 | gap 1, overlap 1336921 1336918 GGAGGTTCCGCAAAA CCTCC-CCCCGGGC CCTGC GCCAGGGGAGGAGG GGCCCCACCCCCATG TERM 1113 1337196 - 1337176 - G 71 -8.2 -4.08394 | overlap 1337177 AGAGGGGGTGGAAAA GGGCGGTG TCCCG CACCTCCC GGGAGACCCGGGAGA TTHA1405 1338615 - 1338187 - | cytochrome c-type biogenesis protein CcmE TTHA1406 1339393 - 1338707 - | cytochrome c-type biogenesis protein, heme exporter protein TERM 1114 1338958 - 1338931 - G 74 -7.6 -4.20696 | gap 1, overlap 1338932 TGAGGAAGCCCAAAA CGCC-CACGGCCG CCG CCGCCTTGCGGCG AAGCTCGGGGTCCTC TERM 1115 1339227 - 1339211 - G 74 -2.1 -4.74801 | overlap 1339212 1339213 GAAGGTGACGAAAAA GGCCAGG TAC CCCACCC AGGCGGTGGGAACGT TTHA1407 1340120 - 1339455 - | cytochrome c-type biogenesis protein, heme exporter protein B TTHA1408 1340686 - 1340117 - | ABC transporter, ATP-binding protein TTHA1409 1341395 - 1340727 - | cytochrome c-type biogenesis protein CcdA TTHA1410 1341962 - 1341405 - | sulfite dehydrogenase cytochrome subunit SoxD TTHA1411 1343247 - 1341955 - | sulfite dehydrogenase SoxC precursor TERM 1116 1343130 - 1343095 - G 81 -16 -3.53224 | opp_overlap 1343090 1343086 CACCCCGGCCTCAAA GGGGCTCCGCTCCCCG TACT CGGCGAGGGGCGCCCC TAAGGTCTTGGTGGG TERM 1117 1343309 - 1343283 - R 100 -25.2 -3.17075 | CTTCCCGCAAGGGAA CCCCCCGCCCCT TTT AGGGGCGGGGGG AAAAGCCCTTAGGCC TTHA1412 1344604 - 1343318 - | sulfide dehydrogenase flavocytochrome C TERM 1118 1344232 - 1344254 + g 71 -6.2 -4.25104 | overlap 1344200 TGCGCACCAGGCGGC GGTCCCGG TTGATCT CCAGGACC TTTTCCTGGACGAAG TTHA1413 1345474 - 1344620 - | hypothetical protein TTHA1414 1345905 - 1345471 - | putative sulfurtransferase TTHA1415 1346714 - 1345908 - | sulfur oxidation protein SoxA TTHA1416 1347278 - 1346718 - | cytochrome c (SoxX) TTHA1417 1348996 - 1347275 - | sulfur oxidation protein SoxB TTHA1418 1349565 - 1348993 - | putative cytochrome c TTHA1419 1350351 - 1349575 - | putative cytochrome c precursor TERM 1119 1350416 - 1350393 - R 100 -19.6 -3.38291 | opp_overlap 1350391 1350390 TCCATAAGGTCATAA GGTGCCCGGG GACC CCCGGGCACC CCCTTTAGACCAGCT TTHA1420 1350747 - 1350421 - | sulfur oxidation protein SoxZ TERM 1120 1350538 - 1350571 + g 75 -15.3 -3.31144 | gap 1 GTAGAGGGGGTTGGC GCTGGTGGAGGGCCCG GGC CGGGCC-TCCGCCACC TTCTCCCCCTCAAAG TTHA1421 1351218 - 1350760 - | sulfur oxidation protein SoxY TTHA1422 1351666 - 1351205 - | thioredoxin TERM 1121 1352164 - 1352140 - g 75 -12.9 -3.65046 | GGGCGACGCCAAGAA GGTCAAGGGCT TCA AGCCCTTCACC GCCGAGGAGGTGAAG TTHA1423 1351802 - 1352248 + | cytochrome c-552 precursor TTHA1424 1352258 - 1353286 + | ABC transporter ATP-binding protein (CycB) TTHA1425 1353283 - 1353894 + | putative thiamine pyrophosphokinase TTHA1426 1354613 - 1353891 - | hypothetical protein TTHA1427 1356688 - 1354610 - | UvrD protein TERM 1122 1355737 - 1355696 - G 70 -14.4 -3.14132 | gap 1, opp_overlap 1355713 1355714 CTCCTCGGCCACGAA GCGGGCCTCCTCCCGGGCG TCCTC CGCCCGGTAG-AGGCGCAC GGGCTCCCCGCCCCG TERM 1123 1355713 - 1355771 + g 75 -14.5 -3.28712 | opp_overlap 1355696, overlap 1355714 1355769 GGGCCTCCTCCCGGG CGTCCTCCGCCCGGTAGAGGC-GCACGGG CTC CCCGCCCCGCTTC-ACCGGGCGCAGGGCC TTCTCCAGGCGGAGG TERM 1124 1355714 - 1355770 + g 78 -18 -2.57132 | opp_overlap 1355696, overlap 1355713 1355769 GGCCTCCTCCCGGGC GTCCTCCGCCCGGTAGAGGC-GCACGGG CTC CCCGCCCCGCTTC-ACCGGGCGCAGGGC CTTCTCCAGGCGGAG TTHA1428 1356726 - 1357613 + | putative phosphoglucomutase/phosphomannomutase TERM 1125 1358069 - 1358047 - g 77 -11.2 -4.08216 | overlap 1358022 1358020 1358019 CCACCCGCCGCAAAA CCCCCTCCCC CTG AGGGACGGGG AGGCGCTGGAGGTGG TERM 1126 1358237 - 1358194 - g 74 -10.2 -4.07568 | CGCCCTCCTGGAAAA GGTCTCCCCCAACGTGGGCC TCTG GGCCTACACCCGGGAAAACC CCCTCAAGGACTTCC TERM 1127 1358519 - 1358548 + G 76 -17.1 -2.71364 | CTCCGGGAGGAGGGG GCGGTGGGGCGGG GGGG CCCGCCCTACCGG TACTTCCGGCGCTAA TTHA1429 1357610 - 1358563 + | metallo-beta-lactamase family protein TERM 1128 1358583 - 1358613 + F 83 -15.4 -3.55622 | CCTAGCCCTGGCCGG GCTTGCCCCGGGGC GGA GTCCGGGGGTAAGC TTTGACCCGGTTCAA TERM 1129 1359171 - 1359139 - g 93 -19.9 -3.57144 | opp_overlap 1359153 CTTCTCAGGCGGAAA GGGGAAGCCCCCAAG GCC CTCGAGGGCCTCCCC TGGCGGGCCTTCCTC TERM 1130 1359896 - 1359884 - g 95 -3.3 -5.25805 | AAGAAACCCAAAAAA CCCTC AAA GACGG CTGGCTCTTCACCGG TTHA1430 1358638 - 1360284 + | long-chain fatty acid--CoA ligase TTHA1431 1360294 - 1360503 + | hypothetical protein TERM 1131 1360575 - 1360530 - f 70 -11.9 -3.36648 | gap 1, overlap 1360537 CAATAGACTTGACAA CATTAGACTCACACCCCCACCC TGA AGGTGGGAG-GTGAGGCCTATG AGCGCCACCGGGCTG TERM 1132 1360568 - 1360537 - f 72 -13.8 -2.94726 | gap 1, overlap 1360530 CTTGACAACATTAGA CTCACACCCCCACCC TGA AGGTGGGAG-GTGAG GCCTATGAGCGCCAC TTHA1432 1360573 - 1361010 + | hypothetical protein TERM 1133 1361063 - 1361096 + T 100 -23.9 -3.14132 | opp_overlap 1361052 1361051 1361083, overlap 1361086 AAATCCCCTCTTTGG GGCCCCCACCGTGGC GAAA GCCACGGTGGGGTCC TTAGTCCAGGACGAA TTHA1433 1361969 - 1361097 - | hypothetical protein TERM 1134 1361244 - 1361268 + g 70 -9.9 -3.75024 | CTTGGTGAGGGTCTC CTCCACCTGGA AAA TCCCGGCGGAG TTGTTCATGGTCACC TTHA1434 1362828 - 1362013 - | 3-hydroxybutyryl-CoA dehydratase TTHA1435 1363539 - 1362832 - | purine nucleoside phosphorylase TERM 1135 1363336 - 1363378 + g 75 -14.8 -3.28924 | overlap 1363335 CACGATGGCCGCCGA GGGGGTGCCCATCCCCGT GGTCTGG ACGGAGACGGGCACGCCC TTGTAAAGGCCCGTG TERM 1136 1363405 - 1363432 + g 77 -10.5 -4.07885 | opp_overlap 1363405 1363404 CGTGTACCCCCAAAG CCCCCGGTGGT CGTTGT ACCGCCTGGGG TTTTGCAAAAAGGTC TTHA1436 1364181 - 1363552 - | ABC-type transporter, ATP-binding protein TERM 1137 1364023 - 1364001 - G 72 -15.6 -2.78384 | CCCCCTCCCAGTAGA CCTCCCCCTC CTG GAAGGGGAGG AGGCCCGCCACCAGG TTHA1437 1364230 - 1364880 + | Crp family transcriptional regulator TERM 1138 1365104 - 1365083 - g 72 -12.9 -3.53012 | opp_overlap 1365083 1365082 TCCTGGCCGGGGAAA CGGGGGGGC TGAA GCCGCCCCG GTTTGACCTGGGCAA TERM 1139 1365576 - 1365542 - g 71 -8.3 -4.08767 | opp_overlap 1365570 1365573 CCCAGGTGGCCAAAA GCGCCGCCGTCCCCG TCCTC CGGGGCCGGGTGGGC GAGGCCCTCATCTTC TTHA1438 1364890 - 1365603 + | hypothetical protein TERM 1140 1365641 - 1365623 - T 73 -5.9 -4.37886 | opp_overlap 1365622 CCAGGCTCCACAAAA GCTGCCC ACGGG GGGAAGC CCTTTTGGTGGGCTT TTHA1439 1366569 - 1365655 - | sugar aminotransferase TTHA1440 1366645 - 1369503 + | excinuclease ABC subunit A (UvrA) TERM 1141 1369532 - 1369505 - T 100 -24.2 -3.72576 | TGGCGGCGGACTAAA CCCCACGCGGGC TCGC GCCCGCGTGGGG GCCCCGGGTGCCCGC TTHA1441 1370540 - 1369551 - | hypothetical protein TERM 1142 1369612 - 1369586 - G 72 -11.5 -3.64703 | overlap 1369568 1369587 1369589 1369601 TCTGGGCGAGGTAAA GGAGCCCCGCC AAGAG GGCGAGGCTCA GGCCCCAGAGGAGGA TERM 1143 1369996 - 1369983 - G 74 -2.3 -4.72986 | CACGGGGAGGAAAAA CCCCA AGGC CAGGG AGAGCCCGCTCGCCA TTHA1442 1371873 - 1370542 - | tRNA (uracil-5-)-methyltransferase Gid TERM 1144 1371812 - 1371789 - G 79 -5.8 -4.62069 | overlap 1371790 GGCGCATCTCAAAAA GGCGCACGGG AACG CCCAGGCGCA AGAGGGTCCAGGCGG TTHA1443 1371920 - 1372219 + | hypothetical protein TTHA1444 1372216 - 1372974 + | imidazole glycerol phosphate synthase subunit HisF TERM 1145 1373495 - 1373473 - g 72 -3.2 -4.56133 | opp_overlap 1373479, overlap 1373468 1373474 1373475 CGCCAAGAACCAAAA CCCCGAGGAG CTT CGCCACGAAG CGGCGGACCTCCTCT TTHA1445 1372979 - 1373623 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 1146 1373961 - 1373942 - g 71 -7.1 -4.27316 | gap 1, opp_overlap 1373924 CGCCCTAAGCGAAAA GGGCG-GG CTCTT CCACGCCC CCGACATGTACATGG glpX 1373613 - 1374581 + | fructose 1,6-bisphosphatase II TTHA1447 1374715 - 1375752 + | alanine dehydrogenase TTHA1448 1375749 - 1377083 + | 4-hydroxybutyrate CoA-transferase TERM 1147 1377750 - 1377729 - g 82 -5 -4.81551 | opp_overlap 1377730, overlap 1377730 1377731 CACCTACAGGAAAAA CGCCGCCC TGCGCG AGGCCGCG GCCCGGCTCCCCGAG TTHA1449 1377193 - 1377948 + | TatD family hydrolase TTHA1450 1377930 - 1379243 + | hypothetical protein TTHA1451 1379230 - 1379529 + | hypothetical protein TERM 1148 1379873 - 1379848 - g 71 -8.9 -4.07568 | CCTGGTGGTGGAAAA CGCCAAGGCCC CGGG GGGCCTCGAGG TCCAGGCCAAGGAGG TERM 1149 1380173 - 1380159 - g 85 -4.2 -5.03715 | ACTACTTTGAAAAAA GGGC CTACCTC GCCC AGTCCCCCCAGCTTT aspC 1379645 - 1380913 + | aspartyl-tRNA synthetase TERM 1150 1380915 - 1380947 + T 78 -10.3 -4.10161 | opp_overlap 1380920 GGCTCACGCCCTAAA GCAAAGCGCCCCGGG CTT CCCGGGGCGCGCCCC TTTTACCCCATGCTG TERM 1151 1380942 - 1380920 - T 100 -22 -4.06055 | opp_overlap 1380915 ACGCCCTAAAGCAAA GCGCCCCGGG CTT CCCGGGGCGC GCCCCTTTTACCCCA sdhB 1381732 - 1381034 - | succinate dehydrogenase iron-sulfur subunit sdhA 1383475 - 1381742 - | succinate dehydrogenase flavoprotein subunit TTHA1455 1383872 - 1383477 - | succinate dehydrogenase, membrane subunit (SdhD) TTHA1456 1384227 - 1383862 - | succinate dehydrogenase, cytochrome subunit TTHA1457 1384513 - 1384956 + | S-adenosylmethionine decarboxylase proenzyme TERM 1152 1384971 - 1384993 + F 85 -14.1 -4.04326 | overlap 1384977 AAGCCGCCCTCCTCT GGTCCCGGG AGCCC CCCGGGGCC TTTCATGTTTCCTTC TTHA1458 1385044 - 1386189 + | hypothetical protein TERM 1153 1386683 - 1386645 - g 86 -14.7 -4.07687 | gap 2 AGGTCCTCCTCAAAA GGCCCAAGGTG-GC-CATC CTG GACGAGCCCACCCTGGGCC TGGACCCCGAGGCCG TTHA1459 1386191 - 1387114 + | ABC transporter, ATP-binding protein TTHA1460 1387104 - 1388060 + | ABC transporter, permease protein TTHA1461 1388457 - 1388077 - | hypothetical protein TTHA1462 1389071 - 1388445 - | putative phosphoribosyltransferase TERM 1154 1390438 - 1390426 - g 95 -3.3 -5.25805 | AAGAAACCCAAAAAA CCCTC AAA GACGG CTGGCTCTTCACCGG TTHA1463 1389147 - 1390829 + | long-chain-fatty-acid--CoA ligase TERM 1155 1390868 - 1390843 - T 100 -19.7 -4.41047 | AGGCCCGAAGGAAAA GCGCCCCGGGG AAGC CCCCGGGACGC TTCCCGCGCCAGGGC rpsI 1391270 - 1390884 - | 30S ribosomal protein S9 rplM 1391695 - 1391273 - | 50S ribosomal protein L13 TERM 1156 1392172 - 1392138 - g 79 -16.4 -3.35679 | CTCGGTGATCCAGAA GGAGCGCCGGGGAGAG TAC CTCTCCCAGACGGTCC AGGTCATCCCCCACA TTHA1466 1391806 - 1393458 + | CTP synthetase TTHA1467 1394492 - 1393455 - | hypothetical protein TERM 1157 1393663 - 1393695 + g 71 -9 -4.07568 | gap 1, opp_overlap 1393641, overlap 1393664 GTGTCCTGGAGGGCG TCCCAGGCCTCGGGG GCCT CCCCG-GGCAAGGGG TTTTCCCCGAGGCGG TERM 1158 1394442 - 1394396 - G 70 -12.8 -3.28791 | opp_overlap 1394441 AGGGGGCCCGGAGAA GGGCCTGGGCGAAGGCGTACCC CCA GGGCTCCCCTTCGGGCAGGTCC AGCGGCAAAAGGGCC TERM 1159 1394532 - 1394513 - H 93 -16.4 -3.9941 | opp_overlap 1394526, overlap 1394508 CCCCCGATAAGGAAA CCCCCCGG TTTC CCGGGGGG CGCGTTGGTGGGCCG TERM 1160 1394670 - 1394629 - H 76 -2.2 -4.91429 | gap 1, overlap 1394630 1394631 AAACGCCAAAGAAAA GTCTAGCCCCTCCCCTTGA AGTTG TCAAGGCGAAGGCCCCG-C TTTGGGAAAGTTTTC TERM 1161 1396132 - 1396100 - g 75 -14.8 -3.41051 | gap 1 GGAGGTGGAGGAGAA GCCCGCCCC-GCCCC CCCT GGGCCTGGAGCGGGC CTTCGGCTGGGACCG TTHA1468 1394784 - 1399262 + | glutamate synthase, large subunit TERM 1162 1399297 - 1399265 - f 73 -14.2 -3.15996 | gap 1, opp_overlap 1399252, overlap 1399263 1399268 GAGCACGGAGTAATA CCACCCCATGCTGGC TTGC GCCAGCATGGGG-GC CCCGGCAAAGGGTTC TERM 1163 1399295 - 1399268 - f 100 -21.4 -2.77999 | opp_overlap 1399252, overlap 1399265 1399263 CACGGAGTAATACCA CCCCATGCTGGC TTGC GCCAGCATGGGG GCCCCGGCAAAGGGT TERM 1164 1399404 - 1399424 + F 91 -11.8 -4.1899 | CAGCGGACCAGCTCG GCCCGGCT CATCA GGCCGGGC TTTTCCATCGCCTCC TTHA1469 1399440 - 1400051 + | hypothetical protein TTHA1470 1401382 - 1400048 - | replicative DNA helicase DnaB TERM 1165 1401951 - 1401928 - g 72 -12.4 -3.54459 | overlap 1401917 1401948 CGAACCCCTCCTAAA GGCCCTCCCC GAGG GGGAAAGGCC CGACCTCCGCGCCCA TTHA1471 1401491 - 1403098 + | putative transglycosylase TTHA1472 1404248 - 1403088 - | Na(+)/H(+) antiporter TTHA1473 1404700 - 1404248 - | hypothetical protein TTHA1474 1405343 - 1404711 - | hypothetical protein TERM 1166 1405215 - 1405199 - G 74 -2.2 -4.63218 | overlap 1405200 1405212 GGTCTTGGAAGAAAA GGGC GGGGACGAA GCCC ATCTTGGCCACCACC TTHA1475 1406167 - 1405340 - | hypothetical protein TTHA1476 1407334 - 1406186 - | Na(+)/H(+) antiporter TERM 1167 1406546 - 1406530 - G 70 -13.7 -3.18681 | GGGTAAGCCCACGAA GGAGGCC TAG GGCCTCC GCCCCCACCACGAGG TERM 1168 1407096 - 1407083 - G 86 -5.9 -5.0133 | overlap 1407085 CAGGGCGTCAAAAAA CCCCG CCCG CAGGG CCTTCCCCGAAAGCT TTHA1477 1407807 - 1407334 - | hypothetical protein TTHA1478 1408262 - 1407804 - | hypothetical protein TERM 1169 1408155 - 1408139 - GR 80 -9.3 -4.25283 | AGGTCCCCACGAAAA GGCCCAC GAG GAGGGCC ACCACCACGAGGTTG TTHA1479 1408671 - 1408225 - | hypothetical protein TERM 1170 1408405 - 1408391 - GR 74 -12.8 -3.57263 | ACCTCGAGGTCCAAA GGCGGC AAG GCCGCC AAGGCGTCCAGCACG TTHA1480 1409152 - 1408739 - | hsp 20 family small heat shock protein TTHA1481 1409578 - 1409156 - | thioredoxin TERM 1171 1409446 - 1409456 + g 76 -8.2 -4.28361 | CCCCCGCCACCTCCT GGGC GAA GCCC TTTTCGTCCGCTTCC TERM 1172 1409516 - 1409543 + g 81 -8.3 -4.56775 | overlap 1409540 CCCGCACACCGGCAC CTGCCCGGGCG GAGGGG TGCCCAGGCGG TTTTTGGCCCCGCAT TTHA1482 1410075 - 1409641 - | bacterioferritin TERM 1173 1410153 - 1410128 - R 100 -19.7 -3.91488 | overlap 1410115 1410142 AAGGTTTTTAAAGAA CCCGCCCCAGG GAAG CCCGGGGCGGG GCCCGCCTCAGCGAA TTHA1483 1410847 - 1410161 - | hypothetical protein TTHA1484 1411273 - 1410860 - | hsp 20 family small heat shock protein TTHA1485 1412473 - 1411289 - | hypothetical protein TERM 1174 1412149 - 1412172 + g 77 -10.3 -4.14472 | CCACCAGGTACCGCC CCGCCTTCT CGTCCA GGAAGGCGG TTTTGACGCTATTCA TTHA1486 1412859 - 1412470 - | hypothetical protein TTHA1487 1415433 - 1412869 - | ATP-dependent Clp protease, ATP-binding subunit ClpB TTHA1488 1415728 - 1415492 - | DafA protein (DnaK-DnaJ assembly factor A) TTHA1489 1416557 - 1415715 - | chaperone protein DnaJ TERM 1175 1416425 - 1416439 + g 76 -3.4 -4.65916 | overlap 1416426 TCTCCTTGAACTTCT CCTCCG CCT CGGGGC TTTTGTTGACGTCCG TTHA1490 1417094 - 1416561 - | GrpE protein (HSP-70 cofactor) TTHA1491 1418997 - 1417150 - | chaperone protein DnaK (heat shock protein 70) TERM 1176 1417378 - 1417405 + g 72 -12 -3.65046 | gap 1 CTGCAGGACCCTTTC CG-CCTGGACGCG GGC CGAGTCCAGGGCG TTCTTGAGCTCGGCG TERM 1177 1418587 - 1418605 + g 74 -9.6 -4.08692 | opp_overlap 1418575, overlap 1418582 1418584 1418596 GTAGGCGGGCACGGT GATCACCG CCT TGGTGATC TTTTCCCCGAGCTTC TERM 1178 1419080 - 1419096 + H 70 -2.1 -4.65895 | overlap 1419080 TTGTCATGGTCGGTT GGTGAGG CGG CCTACCC TTTTTCCCTCCCCCC TTHA1492 1419132 - 1421006 + | cell division protein FtsH TTHA1493 1422222 - 1421065 - | hypothetical protein TERM 1179 1421283 - 1421263 - G 86 -5.3 -4.94992 | overlap 1421264 1421265 GGAAAGCCACAAAAA CCCCTCCTC CGC GAGGAGCCG CAAGGCTTCCCGGAC TTHA1494 1422243 - 1423148 + | putative protease TTHA1495 1423142 - 1423552 + | hypothetical protein TTHA1496 1424504 - 1423629 - | arginase TTHA1497 1425003 - 1424557 - | hypothetical protein TERM 1180 1426107 - 1426089 - gH 73 -11 -3.62591 | GGGAGAAGCCGGAAA GCGAAGAG GTG CCCTTCGC CCGCCTGCCCGACCC TERM 1181 1426887 - 1426862 - gH 71 -14.7 -2.66216 | gap 1, overlap 1426861 CTGGAGTACTACAAG GCCCTCCCCGGC CTC ACCGGGG-GGGC GGGGGCCTACACCCT TTHA1498 1425002 - 1426978 + | elongation factor G TTHA1499 1426979 - 1427869 + | MoxR-related protein TERM 1182 1429683 - 1429671 - g 78 -9.1 -4.3534 | GCCCAAGGAGGAAAA CCCCA TGC TGGGG TGGCGGGGGGCGAGC TTHA1500 1427866 - 1430259 + | phosphoenolpyruvate synthase TTHA1501 1430268 - 1430885 + | putative hemolysin TTHA1502 1430910 - 1431593 + | response regulator TERM 1183 1431940 - 1431898 - g 70 -4.1 -4.37886 | overlap 1431917 TCAGCCTGCAGAAAA GCCCCGCCCTGG-GAAGCCAG CGC CTC-CTCCTCCAGGAGGAGGC CTACCGGGAGCTCCT TTHA1503 1431615 - 1433021 + | sensor histidine kinase TTHA1504 1433181 - 1432975 - | hypothetical protein TERM 1184 1433278 - 1433255 - R 72 -8.8 -4.08064 | gap 1, overlap 1433256 AAGCGCCCGTTAAAA CCCCAGC-CCC GAG GGGTGCCGGGA ACCCAGGAAGGGGGC TTHA1505 1433995 - 1433249 - | cytochrome c assembly protein-related protein TERM 1185 1433773 - 1433759 - G 81 -9.2 -4.60487 | opp_overlap 1433761, overlap 1433761 GAGGAGGGCCAAAAA GGCCAG GTA CCGGCC CAGGGGCCTAAGCCG hemA 1435164 - 1433992 - | glutamyl-tRNA reductase TTHA1507 1435887 - 1435207 - | uroporphyrinogen III synthase TERM 1186 1435624 - 1435603 - GR 72 -12.9 -3.14132 | CCGTGGGGGCAGGAA GGCCGGGGG AAGC CCCCCTGCC CTCAGGACCCCCGCC TERM 1187 1435671 - 1435717 + gr 80 -17.2 -2.72344 | opp_overlap 1435672 1435698 CCGCCACCTTTAGGA AGGGGCGGCCCGCCTCCTCC CAGGCAA GGAGGAGGCGCCTCGCCCCC TCCTTGGAGGTCACG TERM 1188 1435716 - 1435672 - GR 100 -19.2 -3.15544 | opp_overlap 1435671, overlap 1435698 CGCCACCTTTAGGAA GGGGCGGCCCGCCTCCTCCC AGGCA AGGAGGAGGCGCCTCGCCCC CTCCTTGGAGGTCAC TERM 1189 1435720 - 1435698 - GR 82 -17 -3.05384 | opp_overlap 1435671, overlap 1435672 CCTCCTCCCAGGCAA GGAGGAGGCG CCT CGCCCCCTCC TTGGAGGTCACGGCC TTHA1508 1436224 - 1435859 - | gamma-carboxymuconolactone decarboxylase TTHA1509 1436880 - 1436221 - | putative hydrolase TERM 1190 1436411 - 1436373 - G 72 -13 -3.53012 | overlap 1436374 1436403 CCTCCTCCGGGGAAA CCCCGAGGGCCTCCAGGG CCT CCCGGAAGAGCCTCGGGT CGGGCTTGGCGTAGC TERM 1191 1436410 - 1436374 - G 72 -16.5 -2.71712 | overlap 1436373 1436403 CTCCTCCGGGGAAAC CCCGAGGGCCTCCAGGG CCT CCCGGAAGAGCCTCGGG TCGGGCTTGGCGTAG TTHA1510 1436952 - 1437515 + | hypothetical protein TTHA1511 1437515 - 1438096 + | putative catechol 1,2-dioxygenase TTHA1512 1438352 - 1438080 - | putative nucleotidyltransferase TERM 1192 1438626 - 1438612 - g 76 -8.5 -4.2679 | CAAGCTGGAGGAAAA GCCCC TGGAC GGGGC CTTCGCCCGGAGGGT TERM 1193 1438821 - 1438780 - g 77 -10.7 -4.10657 | gap 1, overlap 1438781 GGACACGGCGCAAAA CGC-CCTCCTGGTGGAGGCC CTA GGCCTCGTCCTGGAGGAGCT TAAGGGGGTGGAGGA TTHA1513 1438448 - 1439758 + | adenylosuccinate lyase TTHA1514 1440428 - 1439865 - | hypothetical protein TERM 1194 1440617 - 1440603 - g 77 -4.2 -4.62471 | TTCAACGCGCAAAAA CGGG GGGTGAT CCCG GGCAAGGGCGTGGTG TTHA1515 1440498 - 1441187 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TTHA1516 1441199 - 1441453 + | hypothetical protein TTHA1517 1441450 - 1442133 + | phosphoribosylformylglycinamidine synthetase I TERM 1195 1442169 - 1442189 + G 72 -3.1 -4.57073 | overlap 1442164 1442171 GACTTCTGGGGCACC CTCTTCACC GAG GGGGAGGCG TTTTTGGAAAAGGTC TERM 1196 1442571 - 1442591 + G 79 -12.6 -3.80625 | CACCTGAAGCGGCAG GGCCTGGA CGTCT TCCAGGCC TTTAGCTTCTCCGAC TTHA1518 1442130 - 1442843 + | 2-haloalkanoic acid dehalogenase-related protein TERM 1197 1443026 - 1442977 - g 75 -14.9 -3.29144 | overlap 1442980 1443013 GCACTGCGCCTACAA GAACTCCCGCCCCCTCCTCAAGG CCCT CCCCAAGGAGGGGGAGGCCGTCC TCCAGGGCCCCGGGG TERM 1198 1443023 - 1442980 - g 79 -13 -3.78934 | overlap 1442977 1443013 CTGCGCCTACAAGAA CTCCCGCCCCCTCCTCAAGG CCCT CCCCAAGGAGGGGGAGGCCG TCCTCCAGGGCCCCG TERM 1199 1444900 - 1444843 - g 75 -15.5 -3.30124 | gap 1, overlap 1444879 CTTCACCGTGGAGAA GACCCGCCTCCAGGAGGCCACCCTCCTC CTA GAGGAGCGGGGCCTCCCCTAC-CGGGTC CTGGGGGAGACGGGG TTHA1519 1442843 - 1445020 + | phosphoribosylformylglycinamidine synthase II TTHA1520 1445013 - 1446404 + | amidophosphoribosyltransferase TERM 1200 1446411 - 1446383 - T 78 -10.3 -4.12188 | opp_overlap 1446383, overlap 1446384 CGAGGAGGGGGAAAA GCTCGCCCTAGAG CTT CTCTAGGACGAAG ACCCGGGGGTAGACG TERM 1201 1446410 - 1446384 - T 72 -13.8 -3.06991 | opp_overlap 1446383, overlap 1446383 GAGGAGGGGGAAAAG CTCGCCCTAGAG CTT CTCTAGGACGAA GACCCGGGGGTAGAC TTHA1521 1447310 - 1446390 - | hypothetical protein TTHA1522 1448994 - 1447387 - | GTP-binding protein TERM 1202 1448917 - 1448968 + g 79 -13.7 -3.64822 | gap 2, overlap 1448934 GGGGTCAACGGGGGT GCGGGCGAGGGCCTCGAGGCCTT GGGCGAGG AGGGCC-CG-GACCCGCGCCCGC TTTCCCTCAAGCCCT TTHA1523 1449235 - 1448975 - | hypothetical protein TERM 1203 1449963 - 1449945 - g 76 -8 -4.43844 | GCACCACCCACAAAA CCCTCCGG GGC CCGAGGGG CGGCCTCATCCTCTC TTHA1524 1449266 - 1450489 + | serine hydroxymethyltransferase TERM 1204 1450643 - 1450679 + G 70 -13 -3.29511 | gap 2, opp_overlap 1450629, overlap 1450642 1450665 AGCCTCCTCGTGGAC G-CCCT-CGCCCTCCTCC TCG GGGGGCGGGCGGAGGGGC TTATCGGGCCCTACG TTHA1525 1450514 - 1452100 + | DNA repair protein RecN TERM 1205 1452947 - 1452917 - g 80 -17.6 -3.14468 | opp_overlap 1452910 1452909 CGGGAGTAGACCTAA GCCGCCTCCCCC TTCTCGC GGAGGAGGCGGC GCGGCTTAAGGCCCT TTHA1526 1452112 - 1452972 + | hydroxymethylglutaryl-CoA lyase like protein TTHA1527 1453919 - 1452963 - | NADPH-quinone reductase TERM 1206 1453865 - 1453830 - G 87 -20.4 -3.14344 | CAGGTTCCGCACCAA GACCTCCCCGGGCCCG GGCT CGGGCACCGGGAGGTC CCGCTCCTCCAGCAT TERM 1207 1453948 - 1453963 + r 79 -8.2 -4.37092 | opp_overlap 1453947 1453948 TCAAAAACCTTAAAG GGGGGT CTAG GCCCCC TTTTGTGAAGAAGCT TTHA1528 1454376 - 1453981 - | hypothetical protein TERM 1208 1454137 - 1454113 - G 100 -21.5 -3.28924 | CACGGCCTCGTAGAA CCTCCTCGCCC CCT GGGCGAGGAGG AGCCCCACAAGCTCG TTHA1529 1454881 - 1454393 - | hypothetical protein TTHA1531 1456549 - 1455479 - | hypothetical protein TTHA1530 1454900 - 1455529 + | hypothetical protein TERM 1209 1455656 - 1455604 - GT 77 -10.5 -3.89938 | gap 1, overlap 1455593 1455599 1455598 AGAAGGAAAGCCAAA GCCCCTCCGGGGCCTCCTCCAC CTTCCACTCC GCG-AGGGGGACCCGGATGGGC CTCCGGGCGCCCCGC TERM 1210 1456454 - 1456399 - GT 78 -15.2 -3.28712 | CCTCCTTCTCCAGAA GGAGGTAGAGGTGCTCCCCCTCCCCC TTGG GGAGGTAGGCGGGCACCTCCTCCACC TGGAAGTCCTCGGGC TTHA1532 1458276 - 1456564 - | oligoendopeptidase F TTHA1533 1458300 - 1459052 + | hypothetical protein TERM 1211 1459959 - 1459926 - g 77 -11 -4.07568 | TCGTCCCCCCCAAAA GCCCCCTGGACG-AGG AGGC CCTGCG-CCGGGGGGC GAACCTCTACCTCCC TTHA1534 1459112 - 1460908 + | ribonuclease II family protein TERM 1212 1460933 - 1460970 + T 77 -16.4 -2.62293 | gap 2, overlap 1460936 1460968 CAGGCTCGGGGCCAT GCCGGGCCCCATGCCGGC CCAA GCCGGCATGGGGT--GGC CTTAGTCTTCCCCTT TERM 1213 1460936 - 1460971 + T 77 -14.1 -3.37959 | gap 2, overlap 1460933 1460968 GCTCGGGGCCATGCC GG--GCCCCATGCCGGC CCAA GCCGGCATGGGGTGGCC TTAGTCTTCCCCTTG TTHA1535 1462462 - 1460972 - | isocitrate dehydrogenase TERM 1214 1462474 - 1462493 + H 70 -10.6 -3.59979 | overlap 1462475 GCATGGGTTCACCTC CGGGGGCG GAAT CGCCCCCC TTTACACTACACCAC TTHA1536 1462537 - 1463286 + | putative oxidoreductase-like protein TTHA1537 1464883 - 1463279 - | hypothetical protein TTHA1538 1465016 - 1465396 + | putative oxidoreductase-like protein TERM 1215 1465584 - 1465628 + F 85 -10.1 -4.20918 | gap 3, opp_overlap 1465554, overlap 1465596 TTCGAGTCCCACCGC CGCCACCAGG-AGGCCCCCCGG GAAA CCGGGGGGCTTGCCTA-TG-CG TTTCTTCCACTTCGG TERM 1216 1465596 - 1465617 + F 90 -18.7 -3.15236 | overlap 1465584 CGCCGCCACCAGGAG GCCCCCCGG GAAA CCGGGGGGC TTGCCTATGCGTTTC TERM 1217 1466571 - 1466557 - g 70 -2.8 -4.56597 | CGGCTTGCGGAAAAA GACCTC AGG GAAATC CACCGGACAGCTTCA TTHA1539 1465735 - 1466616 + | putative phage integrase/recombinase TTHA1540 1467166 - 1466591 - | hypothetical protein TERM 1218 1466897 - 1466926 + g 74 -7.7 -4.18018 | opp_overlap 1466887 1466885 AAAGACGCACGCTGT GCGGATGGGTGCG AGGG TGCCCCCGTACGC TTTTACCTGCACCCC TERM 1219 1467341 - 1467296 - H 79 -16.7 -2.96979 | gap 1, overlap 1467291 CGAACAGCAACGACA CGCTCCCCG-GGGCCGAGGTCC ACG GGGCCGGGGACCACGGGGAGCG GCCCTAAGGGGGTAG TTHA1541 1467466 - 1467828 + | hypothetical protein TERM 1220 1469298 - 1469313 + F 70 -8.2 -3.90744 | opp_overlap 1469276, overlap 1469264 1469276 AAACGCCCTTCAAGG CGGCGT TTCC GCGCCG TTCTTTGGAAAGGCG TERM 1221 1470125 - 1470081 - g 70 -14.2 -3.21099 | gap 1, opp_overlap 1470078 1470075 CGGGCCGAGGAGGAA GGGGTCCTGGA-GCGCCAGGC CGAG GCCCGGCTCCTCCCCGACCCC CGCTTCTTCGTCCCC TERM 1222 1470498 - 1470447 - g 74 -4.1 -4.56597 | gap 1, opp_overlap 1470486, overlap 1470448 1470450 1470451 TTCCTGGCGGAAAAA GGAGTCCCCCGG-GAGCTCAAGCC CCTCT GGCCCGTGCGCGCCGAGGGCAACC GGGTGGTGGAGGTCC TTHA1542 1469424 - 1470947 + | cell cycle protein MesJ TERM 1223 1470993 - 1470966 - T 83 -12.6 -4.07568 | GGCCGGTCTCGAAAA CCGGTAGGCCCC TCGC GGGGCCTCGCGG GTTCGAATCCCGCCC TERM 1224 1471021 - 1471053 + T 100 -25.7 -4.21194 | opp_overlap 1471021, overlap 1471003 1471005 CCCCCTCCGCCAAAA GGGATGGAGGCGGCT TCT GGCCGCCTCCATCCC TTTTCCCTCGTCCCG TERM 1225 1471053 - 1471021 - T 100 -25 -4.07568 | opp_overlap 1471003 1471005 1471021 CCCCCTCCGCCAAAA GGGATGGAGGCGGC TTCTG GCCGCCTCCATCCC TTTTCCCTCGTCCCG TTHA1543 1471529 - 1471089 - | hypothetical protein TTHA1544 1471921 - 1471526 - | hypothetical protein TERM 1226 1471628 - 1471577 - G 75 -14.5 -3.3334 | gap 2 AAGCTTACTTGACAA GACCTCTGCAACCTCCACCCCCTCC GCCG GGAGGGCGCGGAGGCC-CAG-GGCC TCGAGGTGAGGCCCG TTHA1545 1472457 - 1471918 - | hypothetical protein TTHA1546 1472572 - 1472985 + | thioesterase family protein TTHA1547 1473921 - 1472959 - | putative peptidase TERM 1227 1473027 - 1473004 - G 72 -3 -4.56597 | gap 1, overlap 1473006 GTTCCCGCCCAAAAA CCCCTCGTCCC CTA AGG-CGCGGAG GTCCCGGTGCCGGTC TERM 1228 1473167 - 1473151 - G 86 -10.1 -4.56597 | CTTGTGCCGGAAAAA GGCCTCC AGG GGAAGCC GCGCCATCCCCCGCT TERM 1229 1474612 - 1474630 + G 70 -12.4 -3.28712 | opp_overlap 1474611, overlap 1474615 1474624 GATCCGCGACCAGAT GGAGGCCC TAA GGGCCTTC TTCTCCACGGACCAG TERM 1230 1474615 - 1474627 + G 73 -10.5 -3.78934 | opp_overlap 1474611, overlap 1474612 1474624 CCGCGACCAGATGGA GGCCC TAA GGGCC TTCTTCTCCACGGAC TERM 1231 1475525 - 1475494 - g 71 -6.4 -4.26076 | gap 1, opp_overlap 1475496, overlap 1475495 CGAGGCCCACCAAAA CG-GCCTCCGCTACC ACC GGAAGCGGCGGAGCG AGGAGCTTTTCCGGG TERM 1232 1475585 - 1475574 - g 72 -5.8 -4.37886 | opp_overlap 1475574, overlap 1475575 1475577 1475578 GGATCGGGGAGAAAA GGAG GCGG CTCC TCTTGGAGCGCTACG TTHA1548 1473944 - 1475716 + | excinuclease ABC subunit C (UvrC) TTHA1549 1476702 - 1475779 - | ribose-phosphate pyrophosphokinase TTHA1550 1477377 - 1476715 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 1233 1476790 - 1476772 - G 77 -6.7 -4.56597 | gap 1 GGCCTCCCGCAAAAA GGCC-TGG AAGT CCAAGGCC GCCCCCTCCCCGGCC TERM 1234 1477300 - 1477267 - G 70 -13.8 -3.14132 | CGTTTCCGCCACCAA GACCCCCTCGCCCC GGTGGA GGGGGAAGGGGGCC TCCAAGGCCTCCCCC TTHA1551 1477841 - 1477374 - | S-ribosylhomocysteinase TERM 1235 1477620 - 1477599 - G 71 -6.5 -4.21908 | gap 1 CACCACCAGGTAAAA CCCCGTGCGG CAG CC-CATGGGG GAGAGGTCAATGACC TERM 1236 1477901 - 1477911 + H 70 -2.4 -4.58283 | opp_overlap 1477901 GGCCCAGGCTCCAAA GCCC CCC GGAC TTTTTCCGCCCCTTG guaA 1477956 - 1479467 + | bifunctional GMP synthase/glutamine amidotransferase protein TTHA1553 1479464 - 1480030 + | hypothetical protein TTHA1554 1480055 - 1480342 + | hypothetical protein TERM 1237 1480470 - 1480438 - g 72 -12 -3.59979 | gap 1, opp_overlap 1480442 1480447 1480455 TGCTTTCAGTTCAAA CCGCCCCGGCACG CCTTCTTC CGCGCCGGG-CGG GGGGTGTTCCTGGTC TTHA1555 1480342 - 1480728 + | hypothetical protein TTHA1556 1480725 - 1481225 + | ribonuclease H (RNase H) TERM 1238 1481463 - 1481432 - g 95 -12.4 -4.54047 | gap 1, opp_overlap 1481441 GGAGCGCATACAAAA GCTCATAG-ACCCCG GCA CGGAGTTCTACGAGC TCATGGCCTTCGCCG TTHA1557 1481244 - 1482905 + | propionyl-CoA carboxylase, beta subunit TTHA1558 1483513 - 1482902 - | MarC family integral membrane protein TTHA1559 1484009 - 1483515 - | arginine repressor/activator TTHA1560 1485209 - 1484019 - | DNA/pantothenate metabolism flavoprotein TTHA1561 1485515 - 1485216 - | DNA-directed RNA polymerase omega chain (RpoZ) TERM 1239 1485369 - 1485356 - G 72 -3.7 -4.56597 | overlap 1485357 TGGGGTCGTCAAAAA GCCCC TCGA GGGTC TGCATCTTGGGCCTC TTHA1562 1486167 - 1485496 - | guanylate kinase (GMP kinase) TTHA1563 1486211 - 1487638 + | (neo)pullulanase TTHA1564 1488078 - 1487635 - | putative methylated-DNA--protein-cysteine methyltransferase (Ogt) TERM 1240 1487772 - 1487749 - G 100 -16 -4.78107 | gap 1 GACGAGGAGGAAAAA GGGGCAGGCCC TAA GGGCC-GCCCC CACCGCCCTGGGGGA TTHA1565 1489039 - 1488083 - | sporulation protein SpoIID-related protein TERM 1241 1488340 - 1488351 + g 76 -7.2 -4.37092 | GCACCCGCCAGGCCC GCCC CGAA GGGC TTTTCTCCAGGACCT TTHA1566 1490622 - 1489168 - | hypothetical protein TERM 1242 1489809 - 1489764 - G 85 -18.9 -3.02144 | gap 1 CCAGGTCCTGGAAGA CGGGCCTGAGCCCCGCCGCCGG GGT CAGGCGGGAGGGGTC-GGCCCG GGCGATCTCCCAAAG TERM 1243 1490455 - 1490398 - G 73 -14.1 -3.28712 | gap 1 GTGGGCCTTGTAGAA GGTGAGGGCGG-GCCCACCGAGAAGC CCCGCCT GCTGCCCCGTGACCACCGCCCCCACC TCGAGGCGCTCCAGG TTHA1567 1491256 - 1490633 - | transcriptional regulatory protein TERM 1244 1491319 - 1491277 - R 100 -17.5 -4.35116 | overlap 1491279 GAGTTTACACGAAAA GGGGCCGGGGGCTGGGGGC GGCAA GCCCCCGGGCCTCGGCCTC GGCGAAGAGGCGGGC TERM 1245 1491317 - 1491279 - R 87 -18.7 -2.51871 | overlap 1491277 GTTTACACGAAAAGG GGCCGGGGGCTGGGGGC GGCAA GCCCCCGGGCCTCGGCC TCGGCGAAGAGGCGG TTHA1568 1492084 - 1491266 - | hypothetical protein TTHA1569 1494841 - 1492091 - | hypothetical protein TERM 1246 1492757 - 1492723 - G 79 -5.6 -4.62069 | opp_overlap 1492723, overlap 1492726 CCGCCAGGTCAAAAA GGACCTCCAGGGCC TGGGGGT GGGCCTTGAGCTCC TCTTCCAGGAGGCGG TERM 1247 1492820 - 1492845 + g 72 -12.5 -3.53012 | gap 1, opp_overlap 1492806 1492804 AGCGGCCAGGTACTG GCCCCGCG-CCG TCT CGGCCTCGGGGC TTTCCCGGAAGGCCC TERM 1248 1493854 - 1493832 - G 73 -11.2 -3.73775 | CCGAGCTCCACCAAA GCCAAGGCCC TGA GGTCCTCGGC CTCCTCGGAAAGGGC TERM 1249 1494220 - 1494210 - G 90 -8.2 -5.00616 | CTTTTGCCCAAAAAA GGCC CGT GGCC GTAGACGAGAAGCCC TERM 1250 1494800 - 1494774 - G 80 -11.4 -4.07687 | AGCTCCGCCTCAAAA CGCCCCGGGGAC AGA GGCCCCTGGACG CCGAAGCGCTCCTTC TERM 1251 1494894 - 1494861 - R 77 -12.4 -3.74693 | gap 1, opp_overlap 1494849 1494867, overlap 1494862 1494864 1494884 CGGGAGTCTACCAAA GGACGAGGGGGGCGG TAAAG CCACCCCCCTTG-CC TTCAGGCGGGCGCTT TERM 1252 1494894 - 1494862 - R 73 -14.8 -2.84602 | opp_overlap 1494849 1494867, overlap 1494861 1494864 1494884 GGGAGTCTACCAAAG GACGAGGGGGGCGG TAAAG CCACCCCCCTTGCC TTCAGGCGGGCGCTT TERM 1253 1494892 - 1494864 - R 72 -13.8 -2.97171 | opp_overlap 1494849 1494867, overlap 1494861 1494862 1494884 GAGTCTACCAAAGGA CGAGGGGGGCGG TAAAG CCACCCCCCTTG CCTTCAGGCGGGCGC TTHA1570 1495933 - 1494896 - | deoxyhypusine synthase-like protein TTHA1571 1496202 - 1495981 - | hypothetical protein TTHA1572 1496600 - 1496202 - | hypothetical protein TTHA1573 1496821 - 1496597 - | hypothetical protein TTHA1574 1497748 - 1496858 - | putative dehydrogenase TERM 1254 1497432 - 1497388 - GR 74 -12.2 -3.55444 | opp_overlap 1497396 1497397 1497412 CCTCCAGGTCGGAAA GCCTCCTCGGGGCCCA GCGCCCTTCCTTT TGGGCCTCGAGGAAGC CGGAGAGGTCTTTGA TTHA1575 1498250 - 1497723 - | kanamycin resistance protein-related protein TTHA1576 1499534 - 1498260 - | NAD-dependent glutamate dehydrogenase TERM 1255 1499198 - 1499226 + g 100 -12.4 -4.78107 | gap 1 GTATCCCGCCCTTGC CGCCCCCGTAGGG CAGG CCC-ACGGCGGCG TTTTTGATGGTCATC TTHA1577 1500803 - 1499544 - | putative NAD-dependent glutamate dehydrogenase TTHA1578 1502379 - 1500829 - | 1-pyrroline-5-carboxylate dehydrogenase TTHA1579 1503318 - 1502395 - | putative proline dehydrogenase (monofunctional) TTHA1580 1503977 - 1503315 - | GntR family transcriptional regulator TTHA1581 1504915 - 1504025 - | hypothetical protein TTHA1582 1505012 - 1506199 + | 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase) TTHA1583 1506201 - 1507487 + | site-specific DNA-methyltransferase (adenine-specific) TthHB8I TERM 1256 1508045 - 1508035 - gT 81 -2.4 -4.90525 | GAACTCGAAAGAAAA GCCC AGC GTGC CCGAACCAGAGAAGA TTHA1584 1507447 - 1508238 + | Type II restriction enzyme TthHB8I (endonuclease TthHB8I) (R.TthHB8I) TTHA1585 1508608 - 1508225 - | hypothetical protein TERM 1257 1508309 - 1508275 - G 76 -12 -3.76568 | overlap 1508270 1508293 CCACGCAGAAGAGAA GCCCCAGGGCCACGAA AAG CTCGGGGCGCTTGGGC GGGTCCTTGAGGCCC TERM 1258 1509680 - 1509660 - g 86 -6 -4.99435 | overlap 1509661 1509662 CTCAACAAGGAAAAA GGCCCCCA GCCCA CGGGGGAC GACCTCCTGGAGGGG TTHA1586 1508748 - 1510652 + | DNA gyrase, subunit B TERM 1259 1510687 - 1510655 - T 78 -15.6 -3.12327 | gap 1, opp_overlap 1510672, overlap 1510653 GCTGGACATCTAATA CCGCCCCAGGCCGGC TTGC GCCAGCCTGGGA-GG CCCGAGGGGCGCTTA TTHA1587 1511659 - 1510700 - | D-alanine--D-alanine ligase TTHA1588 1512220 - 1511669 - | peptidyl-tRNA hydrolase TERM 1260 1512041 - 1512017 - G 86 -14.9 -4.09864 | opp_overlap 1512018 1512034 AGGGATCTTGTAAAA GCGGGCGAGGG GGG CCACCGCCCGC CCCGTGAGGTTGTAG TERM 1261 1512132 - 1512079 - G 93 -13.7 -4.25104 | gap 1, overlap 1512080 1512130 GGGGCTTGAGGAAAA GCC-CGCCCTCCGCCTCCGCCACGAG CGC CTCGCCCCGGGGGCGGAAGGAAAGGC CCAGGCGGTCCAGGA TERM 1262 1512130 - 1512080 - G 70 -13.8 -3.14848 | overlap 1512079 GGGCTTGAGGAAAAG CCCGCCCTCCGCCTCCGCCACGAG CGC CTCGCCCCGGGGGCGGAAGGAAAG GCCCAGGCGGTCCAG TTHA1589 1512856 - 1512236 - | 50S ribosomal protein L25/general stress protein Ctc TERM 1263 1512923 - 1512894 - R 74 -5.7 -4.45083 | gap 1, overlap 1512904 GGCACACGGAGAAAA GCTTAGCACATGCC GGG GCCAAG-GCTAAGC CCCCCGCCCGCGGCG TTHA1590 1513401 - 1512976 - | hypothetical protein TTHA1591 1513996 - 1513409 - | hypothetical protein TTHA1592 1515326 - 1514022 - | sensor histidine kinase TERM 1264 1514530 - 1514544 + gr 72 -3.4 -4.56597 | opp_overlap 1514480, overlap 1514526 1514521 1514531 CGCAAGGCCCCCTCC AGGGCC CGG GGCTCG TTTTTCCGGCGGAGC TERM 1265 1514607 - 1514640 + gr 73 -14.5 -2.82623 | gap 1, overlap 1514604 GGTGCGGAGCTCGTG GGAGGCGTGGCGGGCG AAG CGCCGGGC-CGCCTCC TCCTTCTCGGCGAGC TERM 1266 1514870 - 1514852 - GR 88 -10.2 -4.42639 | AGACCCCAAGCAAAA GCCCCCCG CCC CAGAGGGC GTAGCGGGCGAGGAG TERM 1267 1515153 - 1515122 - GR 72 -8.7 -4.11216 | overlap 1515123 GGGCCAGGCGGAAAA GCTCCAGGAGGAG CCGCTC CTCGTCCTGGACC CCCTCCGCCTGGAGG TTHA1593 1515945 - 1515295 - | hypothetical protein TERM 1268 1515793 - 1515775 - GR 70 -4.4 -4.4267 | overlap 1515768 1515776 1515777 GCGCAAAAGGGAAAA CCCGTCCC CCT GGGGCAAG AGCACGTCCAAAACC TERM 1269 1515844 - 1515828 - GR 70 -10.1 -3.72576 | overlap 1515831 CCTCGGCCCAGGAAA GAAGGCC TAA GGCCTCC TCGGGCCGGTCCACG TERM 1270 1515851 - 1515831 - GR 70 -8.9 -4.00042 | overlap 1515828 CGGCCCAGGAAAGAA GGCCTAAGG CCT CCTCGGGCC GGTCCACGGCCCGCA TTHA1594 1517900 - 1515942 - | serine/threonine protein kinase TERM 1271 1517526 - 1517487 - G 70 -10 -3.86822 | gap 1, opp_overlap 1517524 GAAGCGGCGCACAAA CCTG-GGGTCCCCGAGGAA GCG CTCCTGGGGAACCTTCAGG GCCACCAAGCGGCCC TTHA1595 1518664 - 1517900 - | protein serine/threonine phosphatase TERM 1272 1518236 - 1518226 - G 85 -8.2 -4.62069 | overlap 1518228 CGGTGAGGCGAAAAA CCCC GGT GGGG CCGAAGCGGTAGGCC TERM 1273 1518560 - 1518550 - G 78 -8.2 -4.32034 | opp_overlap 1518554, overlap 1518551 CGAGGAGGAGCAAAA GCCC CGC GGGC GTCTCCAGGGGGAGG TERM 1274 1520130 - 1520075 - g 93 -21 -3.01712 | gap 1 TCCCCTCCTCCAAGA GGTGGGCCAGGCCCTGGGCCTGGAGGC GGA GGC-CCAGACCCTGGGCCAAGCCCTCC GGGAGTACCTGGGCC TTHA1596 1518681 - 1520396 + | hypothetical protein TTHA1597 1520439 - 1521632 + | putative transporter TTHA1598 1522627 - 1521629 - | delta-aminolevulinic acid dehydratase TERM 1275 1522538 - 1522489 - G 73 -10.6 -3.76224 | opp_overlap 1522481 1522481 1522489 1522492, overlap 1522490 1522522 CGGGCATGGAGGAAA CCTCCTCCTTCTCCCCCCCCTC CTTCAC GAAGAGGGGGAGGATGAGGTGC TTTGGGGAAAGCTCC TERM 1276 1522801 - 1522850 + G 86 -18.5 -3.41051 | overlap 1522802 1522804 CCTGAGGCTCAAGCC CGAGGCCCTCAAGGCCTTCCAGG ACGA CCCGGAGGGCCTCGAGGACCTCC TTCTGGTGGCCATCC TERM 1277 1522802 - 1522849 + G 89 -22 -2.64416 | overlap 1522801 1522804 CTGAGGCTCAAGCCC GAGGCCCTCAAGGCCTTCCAGG ACGA CCCGGAGGGCCTCGAGGACCTC CTTCTGGTGGCCATC TERM 1278 1522804 - 1522847 + G 84 -18.8 -2.86271 | overlap 1522802 1522801 GAGGCTCAAGCCCGA GGCCCTCAAGGCCTTCCAGG ACGA CCCGGAGGGCCTCGAGGACC TCCTTCTGGTGGCCA TTHA1599 1522640 - 1522957 + | hypothetical protein TTHA1600 1522958 - 1523542 + | RecR protein TTHA1601 1523545 - 1523928 + | hypothetical protein TTHA1602 1523916 - 1524257 + | hypothetical protein TERM 1279 1524354 - 1524377 + G 77 -10.9 -4.11216 | TGGGGGAGGCCTCCG GCGCGGCGG AGCGGG CCGCCGCCC TTTTGGGCCTGGGCG TTHA1603 1524242 - 1524580 + | hypothetical protein TTHA1604 1524577 - 1524843 + | hypothetical protein TERM 1280 1524851 - 1524909 + T 100 -24 -4.07568 | gap 1, opp_overlap 1524860 AGGCCTGAAGCCTCC CCGGTAAAACCCCCTGCCTCCCCCGCC CTACCC GGCGAAGGAGGCAGGGGGTTT-ACAGG TTTTCCCGCCACCAG TERM 1281 1524901 - 1524860 - T 100 -27.4 -4.07568 | opp_overlap 1524851 GCCTCCCCGGTAAAA CCCCCTGCCTCCCCCGCC CTACCC GGCGAAGGAGGCAGGGGG TTTACAGGTTTTCCC TTHA1605 1526759 - 1524903 - | acylamino-acid-releasing protein TERM 1282 1525778 - 1525760 - G 74 -8 -4.30576 | overlap 1525762 CCTTGAGGAGGAAAA GCCCCCGC TCC GTGAGGGC GAAGGCGAGGACGCT TTHA1606 1526776 - 1527504 + | hypothetical protein TERM 1283 1527998 - 1528020 + G 76 -16.2 -3.23216 | overlap 1527999 AGGGGTACCTGGCCC TCGCCCGGGC CGA GCCCGGGCGC TTCGTGGTCCTGGAC TERM 1284 1527999 - 1528019 + G 85 -19.7 -2.53715 | overlap 1527998 GGGGTACCTGGCCCT CGCCCGGGC CGA GCCCGGGCG CTTCGTGGTCCTGGA TTHA1607 1527505 - 1528101 + | thymidylate kinase (TMP kinase) TTHA1608 1528109 - 1528564 + | hypothetical protein TTHA1609 1528566 - 1529102 + | hypothetical protein TTHA1610 1529332 - 1529099 - | hypothetical protein TERM 1285 1529220 - 1529260 + g 70 -13.9 -3.21099 | GGGGGGGTGATGACC CGCTTCAAGGGCTCCCCCG TCT CGGGGTGGGCCTTGAGGGG TTCGTCGTGAAAGCC TTHA1611 1529408 - 1529962 + | 5-formyltetrahydrofolate cyclo-ligase family protein TERM 1286 1530547 - 1530504 - g 83 -17.4 -3.31792 | gap 1 CGACGACCCCGAGAA CGTGGA-GGCCGCCCGGAGGC TCG GCCTCCGGGCGGAGGTCTACG CGCCCATAGGGGCGC TTHA1612 1529968 - 1530579 + | putative hydrolase TTHA1613 1531103 - 1530576 - | adenine phosphoribosyltransferase TTHA1614 1531649 - 1531113 - | adenine phosphoribosyltransferase TTHA1615 1531672 - 1532100 + | hypothetical protein TERM 1287 1532821 - 1532861 + G 85 -14 -4.13767 | overlap 1532815 1532813 CCGGGCCCTGGCCGT GGCCCACCACGCCCT-CTTC CTG GAGGTGGGGCG-GGAGGGCC TTTTGGGCTACGCCC TTHA1616 1532132 - 1532929 + | putative acid phosphatase precursor TTHA1617 1533242 - 1532910 - | HIT family protein TTHA1618 1534554 - 1533244 - | hypothetical protein TTHA1619 1534617 - 1535552 + | methyltransferase TTHA1620 1535572 - 1536636 + | aminotransferase, class I TTHA1621 1537151 - 1536681 - | heat shock protein, class I TERM 1288 1537767 - 1537732 - g 85 -8.9 -4.72272 | gap 1, opp_overlap 1537733, overlap 1537733 CCCCGGGAGCAAAAA CGCCCCCCTGGAGCTC TTCCT GAGC-CCGGAGGGGCT TCTTGAAAGGCTCGG TERM 1289 1537733 - 1537766 + G 75 -12.4 -3.62046 | gap 1, opp_overlap 1537732 1537733 CCCGGGAGCAAAAAC GCCCCCCTGGAGCTC TTCCT GAGC-CCGGAGGGGC TTCTTGAAAGGCTCG TERM 1290 1537766 - 1537733 - g 70 -12.4 -3.43042 | gap 1, opp_overlap 1537733, overlap 1537732 CCCGGGAGCAAAAAC GCCCCCCTGGAGCTC TTCCT GAGC-CCGGAGGGGC TTCTTGAAAGGCTCG TTHA1622 1537244 - 1537936 + | thiosulfate sulfurtransferase TERM 1291 1538468 - 1538525 + G 77 -16.8 -2.91772 | gap 1, opp_overlap 1538465 1538523, overlap 1538468 TTCCCCCGGAAACCC GGGTCCACCCGGGGCACG-GGCCCGGG ACCAC CCTGGGCCTCGAGGCCCGGACGAACCC CTTTCTCACGGGGTT TERM 1292 1538468 - 1538526 + G 73 -10.8 -3.86822 | gap 2, opp_overlap 1538465 1538523, overlap 1538468 TTCCCCCGGAAACCC -GGGTCCACCCGGGGCACG-GGCCCGGG ACCAC CCTGGGCCTCGAGGCCCGGACGAACCCC TTTCTCACGGGGTTA TTHA1623 1537933 - 1538556 + | metallo-beta-lactamase superfamily protein TTHA1624 1538544 - 1539272 + | hypothetical protein TTHA1625 1539704 - 1539276 - | osmotically inducible protein OsmC TTHA1626 1540370 - 1539780 - | hypothetical protein TERM 1293 1540875 - 1540908 + G 91 -18.1 -3.62572 | GGAGGACCCCTACGG GGCGGGGGCCAAGGC GGCG GCCTTGGCCCGGGCC TTTGACCTCGTGGTC TTHA1627 1540441 - 1541217 + | hypothetical protein TERM 1294 1541720 - 1541680 - g 70 -13.9 -3.16564 | CCCGGACCGGATCAA GGCGGAGGAGCTCCCGGAA AGC CTCCTGGACCTCCCCCGCT TCGCCCGGGAGAAGG TTHA1628 1541285 - 1542277 + | iron ABC transporter, periplasmic iron-binding protein TTHA1629 1542322 - 1543872 + | iron ABC transporter, permease protein TTHA1630 1543851 - 1544903 + | iron ABC transporter, ATP-binding protein TERM 1295 1545405 - 1545463 + G 86 -20.3 -2.90075 | opp_overlap 1545389, overlap 1545442 CCGGCCGGGGGAGCG GGAGCTCCTCGAGGCCCGGCTCC AGGTGGCGGAGGG GGAGGCGGGCCTCGAGGTGCGCC TCTACTTCCGGGGGA truA 1544908 - 1545669 + | tRNA pseudouridine synthase A TERM 1296 1545700 - 1545671 - T 83 -15.7 -3.55563 | overlap 1545672 AGCTCAGCCCCTAAA CCCCCATGCCGGC GCAA GCCGGCATGGGAC GGCCTTAGAGGCGGC TERM 1297 1545699 - 1545672 - T 93 -19.2 -2.73124 | overlap 1545671 GCTCAGCCCCTAAAC CCCCATGCCGGC GCAA GCCGGCATGGGA CGGCCTTAGAGGCGG TTHA1632 1546892 - 1545705 - | peptide ABC transporter, permease protein TTHA1633 1547912 - 1546902 - | peptide ABC transporter permease protein TERM 1298 1547004 - 1546986 - G 73 -10.2 -3.88291 | opp_overlap 1546993 CATCAGGGCCAGAAA GGCCAGGG CGG CCATGGCC ACGTTGTAGTCCTTC TERM 1299 1547491 - 1547474 - G 76 -3.3 -4.71426 | overlap 1547475 TCCCCAGGAAGAAAA CGGGCAT GGAA AAGCCCA CGAAGGAGAGAAAGG TERM 1300 1547562 - 1547552 - G 78 -8.2 -4.37886 | overlap 1547553 1547554 GCACGGCGGAGAAAA CCCC CAC GGGG ATGGCCACCACGAGG TERM 1301 1547968 - 1547943 - R 100 -21.9 -4.72272 | TTGTTCCACCAAAAA GCCCGCTGGGC TAAA GCCCAGCGGGC CTCACTATACCACCC TTHA1634 1549855 - 1547987 - | peptide ABC transporter, peptide-binding protein TERM 1302 1549964 - 1549934 - R 88 -16.3 -3.64049 | gap 1, opp_overlap 1549940, overlap 1549926 1549940 TCAATAAGGCCCAAA GCTAAAGGGGCCTG AAGC CAGGCCCCTTT-GC CCCCTGAGTGGCCCA TERM 1303 1549940 - 1549959 + r 81 -15 -3.55761 | opp_overlap 1549926 1549934 1549940 AGGCCCAAAGCTAAA GGGGCCTG AAGC CAGGCCCC TTTGCCCCCTGAGTG TERM 1304 1549959 - 1549940 - R 87 -15 -3.84719 | opp_overlap 1549940, overlap 1549926 1549934 AGGCCCAAAGCTAAA GGGGCCTG AAGC CAGGCCCC TTTGCCCCCTGAGTG TTHA1635 1550416 - 1550036 - | iron-sulfur cluster biosynthesis protein IscA TERM 1305 1551157 - 1551106 - g 74 -4.3 -4.56597 | gap 2, opp_overlap 1551153, overlap 1551128 1551129 GGCCTTCGGGAAAAA CGCCGCCAACCCCCACCACGAACCC TCCG AGGTCCGCC-TGGAGGAAGG-GGCG GTGGTCCTTCTGGAC TERM 1306 1551247 - 1551231 - g 74 -9.3 -4.08216 | GGATGGCGGGGAAAA GGCCCCC GGA GGCGGCC CACCGGGCCTTCCAA TTHA1636 1550495 - 1551625 + | Xaa-pro aminopeptidase TERM 1307 1552199 - 1552180 - g 72 -11.4 -3.59979 | overlap 1552144 GCCGGGGACCTCAAA CGGGCAAG CGCC CTCGCCCG CAGGCTCGGCCTTCC TTHA1637 1551652 - 1552584 + | ribose-phosphate pyrophosphokinase TTHA1638 1552581 - 1553297 + | hypothetical protein TTHA1639 1553308 - 1553868 + | hypothetical protein TERM 1308 1555085 - 1555142 + G 70 -12.6 -3.30124 | gap 1, overlap 1555089 CAAGGAGACCCTCCA GACCCTCTACGACCTGGGCCTGGTCTC CCTGC GGGACCGGGCCCTGG-CGGAGGAGATC TTCTACCACATCGCC TTHA1640 1553871 - 1555757 + | arginine decarboxylase TTHA1641 1555814 - 1556896 + | GGDEF domain-containing protein TERM 1309 1556930 - 1556897 - T 100 -19.5 -3.90744 | opp_overlap 1556888 1556899 1556927 GCGGCCCCCAAATAA GTGCCCCACCGCGGC TTTC GCCGCGGTGGGGGCC CCAAAAGGGTCTTTC TTHA1642 1558185 - 1556998 - | S-adenosylmethionine synthetase TERM 1310 1558346 - 1558366 + G 71 -8.9 -4.1347 | overlap 1558361 CTCAAGGCCCTCCGC CGCCTCCTG CCC CGGGAGGAG TTTCTCTACTTCGGG TTHA1643 1558271 - 1559044 + | glutamate racemase TERM 1311 1559462 - 1559478 + G 78 -2.1 -4.82901 | overlap 1559457 GGTCCTCTTCGTCCG CTACGCC GTG GGCTTCG TTTTTCTGCCCGGGG TERM 1312 1559667 - 1559633 - g 74 -7.6 -4.25104 | opp_overlap 1559642 CCTCCGGGACCAAAA GGCCGTGGGGCCGGAG GAC CTCCAGCTCTTCCGCC TGACGGACGAGCCTG TTHA1644 1559073 - 1559726 + | hypothetical protein TTHA1645 1561935 - 1559701 - | MutS2 protein TERM 1313 1561171 - 1561161 - G 71 -8.2 -4.12188 | opp_overlap 1561163, overlap 1561162 GGACGAGGTCCAAAA GGCC CAG GGCC TCCAGGGTCTTCGGC TTHA1646 1562305 - 1561958 - | hypothetical protein TERM 1314 1562114 - 1562146 + g 72 -13.3 -3.48276 | TTGCTCCCTTTCCTC GAGGCTCAGGGCCTC CCA GCGGCGCTGAGCCCC TTCTATCAGGGCACG TTHA1647 1563957 - 1562302 - | putative maltodextrin glucosidase TERM 1315 1563873 - 1563883 + g 78 -2.4 -4.84359 | overlap 1563867 GGCCCCGCTCCCAAG GCGC CAT GGGC TTTTTCTGCAACTCC TTHA1648 1564142 - 1564011 - | hypothetical protein TTHA1649 1564469 - 1564182 - | nucleotidyltransferase TTHA1650 1565793 - 1564474 - | maltose ABC transporter, permease protein TERM 1316 1565560 - 1565578 + g 72 -12.4 -3.53224 | GGGCCAGGGGCTTTT CCGCCTTC CCT GGAGGCGG TTTACGAGGGCGGTA TTHA1651 1567122 - 1565794 - | maltose ABC transporter, permease protein TERM 1317 1567174 - 1567131 - R 81 -14.7 -3.55444 | gap 1, opp_overlap 1567159, overlap 1567133 1567135 GCTTCATGGTCTAAA GATACGCCCCCCACGGGA AGCGGGAGG TCCCGTGGGGAGCGT-CC ATAGGGGTTACCTGC TERM 1318 1567173 - 1567133 - R 85 -16.2 -3.35597 | opp_overlap 1567159, overlap 1567131 1567135 TTCATGGTCTAAAGA TACGCCCCCCACGGGA AGCGGGAGG TCCCGTGGGGAGCGTC CATAGGGGTTACCTG TERM 1319 1567171 - 1567135 - R 93 -18.8 -3.24708 | opp_overlap 1567159, overlap 1567133 1567131 CATGGTCTAAAGATA CGCCCCCCACGGGA AGCGGGAGG TCCCGTGGGGAGCG TCCATAGGGGTTACC TTHA1652 1568378 - 1567182 - | maltose ABC transporter, periplasmic maltose-binding protein TERM 1320 1567946 - 1567926 - G 77 -4 -4.66833 | gap 2, opp_overlap 1567928 1567938, overlap 1567927 1567928 CGCCAAGGCCAAAAA CTCCTCCCAG GTC CTGGG-GG-G TTCCTTCACGTACTT TERM 1321 1567928 - 1567946 + g 70 -12.4 -3.36557 | opp_overlap 1567926 1567927 1567928, overlap 1567938 CCAAGGCCAAAAACT CCTCCCAG GTC CTGGGGGG TTCCTTCACGTACTT TTHA1653 1569509 - 1568478 - | hypothetical protein TERM 1322 1569161 - 1569111 - G 87 -20.4 -3.24747 | opp_overlap 1569111 1569110, overlap 1569146 GTGGTAGACCACGAA CTCCTCGGAGAGGCGCTTCTCCTC GGG GCGGAGAAGGGCCCCTCGGAGGTG GGGCTCGAGGGCGGC TTHA1654 1570129 - 1569506 - | nucleoside-triphosphatase (HAM1 protein) TERM 1323 1569709 - 1569653 - G 70 -12.9 -3.36878 | CTCAGGGACGTAGAA GAGGGGATCGTAGCCGAAGCCCCCC TCGCCCC GGGGGGCCTCGAGGATCACCCCCTC CACGCTCCCCTCGTA TTHA1655 1571071 - 1570133 - | octaprenyl-diphosphate synthase TTHA1656 1571531 - 1571088 - | hypothetical protein TTHA1657 1572179 - 1571544 - | redox-sensing transcriptional repressor Rex TTHA1658 1572946 - 1572176 - | hypothetical protein TTHA1659 1574309 - 1572948 - | TPR repeat-containing protein TERM 1324 1573322 - 1573368 + g 76 -17.2 -2.73364 | gap 1, opp_overlap 1573350 CCTGCCGCCGTCCTA GGCCTTGGGCCGCCTGGGCCT GGAGGA AGGCCCCGGCGGGCCC-GGCC TCCTTGGCGTAGCGG TTHA1660 1574363 - 1574875 + | hypothetical protein TTHA1661 1575705 - 1574872 - | integral membrane protein TERM 1325 1576020 - 1576001 - g 86 -5.7 -4.91109 | gap 1 CCTCCACTACAAAAA GCT-CGCG GAGGA CGCGGAGC AAAGCCGCTTCACCG TTHA1662 1575747 - 1576226 + | hypothetical protein TERM 1326 1576349 - 1576307 - T 77 -13.3 -3.60098 | overlap 1576308 ACGGGGTAGCCCAAA GCCCC-CCGGGCCGAGGCTCC GGG GGGGCCG-GTCCCGGCGGGGC TACTCCACCAGCTCC TERM 1327 1576332 - 1576308 - T 72 -15 -2.75844 | gap 1, overlap 1576307 CGGGGTAGCCCAAAG CCCCCCGG-GC CGAG GCTCCGGGGGG GCCGGTCCCGGCGGG rplQ 1576705 - 1576349 - | 50S ribosomal protein L17 TTHA1664 1577657 - 1576710 - | DNA-directed RNA polymerase subunit alpha rpsD 1578305 - 1577676 - | 30S ribosomal protein S4 TTHA1666 1578707 - 1578318 - | 30S ribosomal protein S11 rpsM 1579124 - 1578744 - | 30S ribosomal protein S13 rpmJ 1579249 - 1579136 - | 50S ribosomal protein L36 TTHA1669 1579477 - 1579259 - | translation initiation factor 1 TTHA1670 1580253 - 1579486 - | methionine aminopeptidase TTHA1671 1580813 - 1580253 - | adenylate kinase secY 1582133 - 1580817 - | preprotein translocase subunit SecY rplO 1582587 - 1582135 - | 50S ribosomal protein L15 rpmD 1582766 - 1582584 - | 50S ribosomal protein L30 rpsE 1583235 - 1582747 - | 30S ribosomal protein S5 rplR 1583586 - 1583248 - | 50S ribosomal protein L18 rplF 1584140 - 1583598 - | 50S ribosomal protein L6 rpsH 1584556 - 1584140 - | 30S ribosomal protein S8 rpsN 1584811 - 1584626 - | 30S ribosomal protein S14 rplE 1585367 - 1584819 - | 50S ribosomal protein L5 rplX 1585703 - 1585371 - | 50S ribosomal protein L24 rplN 1586071 - 1585703 - | 50S ribosomal protein L14 rpsQ 1586385 - 1586068 - | 30S ribosomal protein S17 TTHA1684 1586596 - 1586378 - | 30S ribosomal protein L29 TERM 1328 1586486 - 1586513 + g 75 -15 -3.28712 | gap 1, overlap 1586489 GCCGATGGAGGCCTG GAAGCGG-AGCTC CAT GAGCTCCCGCTTC TTCTCCCGCACGAGC TERM 1329 1586489 - 1586510 + g 73 -10.9 -3.78934 | gap 1, overlap 1586486 GATGGAGGCCTGGAA GCGG-AGCTC CAT GAGCTCCCGC TTCTTCTCCCGCACG rplP 1587008 - 1586583 - | 50S ribosomal protein L16 rpsC 1587731 - 1587012 - | 30S ribosomal protein S3 rplV 1588062 - 1587721 - | 50S ribosomal protein L22 rpsS 1588346 - 1588065 - | 30S ribosomal protein S19 rplB 1589185 - 1588355 - | 50S ribosomal protein L2 rplW 1589527 - 1589237 - | 50S ribosomal protein L23 rplD 1590141 - 1589524 - | 50S ribosomal protein L4 rplC 1590773 - 1590153 - | 50S ribosomal protein L3 rpsJ 1591087 - 1590770 - | 30S ribosomal protein S10 TTHA1694 1592316 - 1591096 - | elongation factor Tu TERM 1330 1592364 - 1592338 - R 89 -18 -3.33696 | CCTCCTCGCAAGGAA GGGGCGGGCCCT AAA AAGGCCCACCCC GAAGCCGCGCTATTG TTHA1695 1594449 - 1592374 - | elongation factor G TTHA1696 1594922 - 1594452 - | 30S ribosomal protein S7 rpsL 1595337 - 1594930 - | 30S ribosomal protein S12 TTHA1698 1595519 - 1596643 + | carboxypeptidase G2 TTHA1699 1596640 - 1597116 + | hypothetical protein TTHA1700 1597119 - 1597391 + | hypothetical protein TTHA1701 1597403 - 1597687 + | hypothetical protein TERM 1331 1597915 - 1597887 - g 72 -13.1 -3.55444 | CGTGGAGGGGCCAAA GGAGCTCTGCCAG AGG CTGGTGGAGCTCC TCAAAAGCCGGCTCG TERM 1332 1597932 - 1597922 - g 71 -8.2 -4.08767 | opp_overlap 1597924, overlap 1597923 TGGAGCTCCTCAAAA GCCG GCT CGGC CCCAAGGCCGAGCCC TERM 1333 1597924 - 1597947 + G 70 -13.8 -3.14344 | opp_overlap 1597922 1597923 GAGCTCCTCAAAAGC CGGCTCGGCC CCAA GGCCGAGCCC TTCGTGAAGCGGCTG TTHA1702 1597690 - 1598088 + | hypothetical protein TTHA1703 1599464 - 1598109 - | sodium-alanine symporter family protein TERM 1334 1598255 - 1598244 - G 83 -7.2 -4.61231 | overlap 1598245 1598246 GGAGACGGCCAAAAA GGCC TCGA GGCC CCCCAAGGGCCCCAC TERM 1335 1598382 - 1598355 - G 71 -9 -4.07568 | overlap 1598331 CTCCTCGCCGTAAAA CCCCCAGGAGAC CATG GTCCCCAGGGCG AAGACCGCCACGGTG TERM 1336 1598939 - 1598902 - G 73 -11.2 -3.74519 | overlap 1598889 1598891 1598903 AAGAGGCCCACCAAA GCGGGCGGGGCCCC CAAGGGGGCC AGGGCCCCCCCCAC CGCCCCCGCCTGGGA TERM 1337 1598984 - 1598974 - G 71 -8.2 -4.13767 | overlap 1598975 TTGCCGATGCCAAAA GCGG CCA CCGC GGCGAAGAAGGCGAA TTHA1704 1600250 - 1599468 - | hypothetical protein TERM 1338 1600180 - 1600156 - G 86 -5.5 -5.00616 | overlap 1600157 TCGGCCTCCAAAAAA GGGGGACGCAG GTG CAGCCTCCCCG TGCGCCCGGCGCTCA TTHA1705 1600307 - 1600990 + | esterase TTHA1706 1601003 - 1601749 + | putative divalent heavy-metal cation transporter TTHA1707 1602433 - 1601768 - | sugar fermentation stimulation protein family protein TERM 1339 1602481 - 1602452 - R 77 -7.7 -4.42788 | opp_overlap 1602457, overlap 1602457 CCCAAGGCTACAAAA GGGAAGGCCCGGG AGGT CCCGGGCCTTTTG GCGGAGAGGGCGGGA TERM 1340 1602457 - 1602476 + r 95 -16.4 -4.07568 | opp_overlap 1602457 1602452 GGCTACAAAAGGGAA GGCCCGGG AGGT CCCGGGCC TTTTGGCGGAGAGGG TERM 1341 1602476 - 1602457 - R 85 -16.4 -3.41587 | opp_overlap 1602457, overlap 1602452 GGCTACAAAAGGGAA GGCCCGGG AGGT CCCGGGCC TTTTGGCGGAGAGGG TERM 1342 1602604 - 1602630 + r 75 -9.3 -4.07568 | GTGAGGGATTCGAAC CCCCGGTGGGC TTCGC GCCCACAGCGG TTTTCAAGACCGCCG TTHA1708 1603165 - 1602692 - | hypothetical protein TTHA1709 1604573 - 1603149 - | hypothetical protein TERM 1343 1604192 - 1604180 - G 75 -5.5 -4.56597 | overlap 1604181 CCCCTTCGGCAAAAA CCTCC TCG GGAGA AAGGAGCTCCTTGAG TERM 1344 1604421 - 1604387 - G 79 -16.4 -3.29511 | overlap 1604358 TGCAGCTCCCCACAA GCCCCGGCCCCACC TCCACCC GGTAGGGCCTGGGC TCCGAGCCCTGCACC TERM 1345 1604550 - 1604532 - G 70 -2.2 -4.56597 | opp_overlap 1604507, overlap 1604534 CTCCTCGGGGAAAAA GGCGGCGA AGT CCTCCTCC TTCTCCGGGGGAAAA TTHA1710 1604610 - 1605662 + | radical SAM domain-containing protein TERM 1346 1605842 - 1605869 + G 71 -6.2 -4.3129 | overlap 1605843 GCCTTCCGGGCCCTC TCCGCCTGGC GGGGAAAG GCGAGGCGGG TTTTCCTCCTGGGTC TTHA1711 1605650 - 1607020 + | hypothetical protein TTHA1712 1607406 - 1607017 - | hypothetical protein TTHA1713 1607458 - 1607847 + | hypothetical protein TTHA1714 1608593 - 1607844 - | putative heme peroxidase TTHA1715 1608626 - 1609693 + | hypothetical protein TERM 1347 1610459 - 1610514 + G 72 -3 -4.56597 | gap 1, opp_overlap 1610424 1610423 1610479, overlap 1610460 1610460 AGGAGATCCGGGCCC TGGAG-GTGGCGGAGGAGAAGCGGCGC CTG GAGGAGCTCGTCCTCCGCTACGCCCCC TTTTTGGACCACCCC TERM 1348 1611790 - 1611813 + G 72 -12.4 -3.48024 | overlap 1611772 1611789 GAGGCCCTGGGCCCT GCTCTCGTCC GCCT GGGCGGGAGC TATTTGGTCCTCGCC TTHA1716 1609690 - 1611906 + | hypothetical protein TTHA1717 1611926 - 1614109 + | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp synthase) TERM 1349 1614238 - 1614265 + F 100 -24.2 -2.70932 | opp_overlap 1614254 GCTTCCTTTTGGGGC CCCCACCGCGGC GAAA GCCGCGGTGGGG TGCTTAGCCGAGCGG TERM 1350 1614387 - 1614360 - f 81 -4.1 -5.08824 | overlap 1614373 1614374 GCGCGAGGGAAAAAA GAGCTAGGGTA AAGGCG TACCCCACCCC ACCTGGGGTGGGGTA TERM 1351 1614406 - 1614373 - f 70 -10.9 -3.61922 | overlap 1614360 1614374 AAGAGCTAGGGTAAA GGCGTACCCCACCCC ACCT GGGGTGGGGTAGGAG GTGGAAGGATGCTGA TTHA1718 1614415 - 1614615 + | heavy metal binding protein TTHA1719 1614618 - 1614902 + | copper homeostasis operon regulatory protein TERM 1352 1615463 - 1615494 + G 72 -11.6 -3.61398 | gap 1, overlap 1615487 TCCTCCAGGCCCTCG CCGCCCTCCCCGT CCTCTAC GCGGGGAGG-CGG TTCTTCCGGCAGGCC TTHA1720 1614907 - 1617303 + | cation-transporting ATPase TTHA1721 1617322 - 1617534 + | hypothetical protein TERM 1353 1617522 - 1617540 + F 70 -6 -4.25104 | TGAGCGGATGAAGCG GGACCT CGCATGA AGGTCC TTTTGGTGGACGACG TTHA1722 1617531 - 1618208 + | putative response regulator TERM 1354 1618266 - 1618287 + G 70 -12.9 -3.28712 | GCTCCTCCTGCTGCT GGCGGAGGC CTTC GCCCCCGCC TTCTACCGGGGGCAC TTHA1723 1618192 - 1619313 + | sensor histidine kinase TTHA1724 1619324 - 1619485 + | hypothetical protein TTHA1725 1619475 - 1619843 + | hypothetical protein TERM 1355 1619833 - 1619871 + F 81 -11.1 -4.11216 | CGGAGCTAAGGCTTT CCCGGA-GGTGAGGGATGC GGC GCCTC-CTCACCCTCTGGG TTTTGGGACTGGGCG TTHA1726 1619847 - 1620599 + | S-layer repressor TERM 1356 1621206 - 1621216 + G 76 -8.2 -4.1891 | opp_overlap 1621206, overlap 1621201 CAAGCGCCGCCACAA GCCC CTT GGGC TTTCTCTTCCCCGCC TTHA1727 1620596 - 1621411 + | hypothetical protein TTHA1728 1621420 - 1621950 + | hypothetical protein TTHA1729 1622566 - 1621904 - | putative methyltransferase TERM 1357 1622559 - 1622548 - G 72 -3.6 -4.58685 | AAAGGTGGGCAAAAA GACG TTTT CGCC AAAGCACGCCTCCAC TERM 1358 1622885 - 1622872 - g 76 -3.8 -4.61231 | GGAGACCTTTAAAAA GCTC AAGAGG GAGC TGGAAGGAGGGGAGG TTHA1730 1622660 - 1622905 + | hypothetical protein TTHA1731 1622902 - 1623537 + | hypothetical protein TTHA1732 1623560 - 1623949 + | hypothetical protein TERM 1359 1623975 - 1624002 + F 78 -9.8 -4.07568 | gap 1, overlap 1623976 CGCTTTCTCTTCCCC ACC-GCCCCTCCC CCA GGGAGGGGTAGGC TTTTAGAAAAGCGAA TERM 1360 1623976 - 1624001 + F 70 -13.3 -3.04398 | gap 1, overlap 1623975 GCTTTCTCTTCCCCA CC-GCCCCTCCC CCA GGGAGGGGTAGG CTTTTAGAAAAGCGA TTHA1733 1624029 - 1626104 + | copper-transporting ATPase, P-type (CopB) TTHA1734 1626140 - 1626376 + | hypothetical protein TERM 1361 1627141 - 1627153 + G 72 -3.3 -4.56597 | GTACGAGGTCCTGGA GGGGA TGA TGCCC TTTTTGGGGGGCGGG TTHA1735 1626428 - 1627642 + | iron-sulfur cluster biosynthesis protein IscS (cysteine desulfurase) TTHA1736 1627650 - 1628066 + | iron-sulfur cluster biosynthesis protein IscU TTHA1737 1628063 - 1628269 + | hypothetical protein TTHA1738 1628266 - 1628976 + | hydrolase TTHA1739 1629509 - 1628973 - | hypothetical protein TTHA1740 1630591 - 1629623 - | glycerol-3-phosphate dehydrogenase TTHA1741 1631592 - 1630588 - | hypothetical protein TERM 1362 1631236 - 1631212 - G 80 -3.4 -4.79223 | overlap 1631218 GGAGAGGAGGAAAAA CCCAAAGCCC GCGAG GGGCGTGAGG AGGTAGGCGGGCACC TERM 1363 1631267 - 1631218 - G 75 -10.6 -4.01411 | gap 1, overlap 1631212 GAGGAAAAACCCAAA GCCCGCGAGGGGCGTGAGGAG GTAGGCGGG CACCCCGAGCCCCTCG-GGGC GGAAGTAGACCCGCC pyrE 1632145 - 1631594 - | orotate phosphoribosyltransferase TTHA1743 1632924 - 1632151 - | orotidine 5'-phosphate decarboxylase TERM 1364 1632277 - 1632252 - G 82 -12.6 -4.07568 | overlap 1632255 GGCTCGCCGCGAAAA GAAGCCCCTC CCCCTT GAGGGGCCTC CCCCCCTGGGCCCCC TERM 1365 1632274 - 1632255 - G 84 -10.7 -4.17048 | overlap 1632252 TCGCCGCGAAAAGAA GCCCCTC CCCCTT GAGGGGC CTCCCCCCCTGGGCC TERM 1366 1633098 - 1633070 - H 100 -18.1 -5.75342 | overlap 1633071 1633072 GGCCTTTAAAAAAAA GCCCCGCCGAGGC CTG GCCTCGGCGGGAA AAAAAGCACCCCCCT TERM 1367 1633097 - 1633071 - H 100 -21.6 -4.04482 | overlap 1633070 1633072 GCCTTTAAAAAAAAG CCCCGCCGAGGC CTG GCCTCGGCGGGA AAAAAAGCACCCCCC TERM 1368 1633096 - 1633072 - H 100 -22.9 -3.01966 | overlap 1633071 1633070 CCTTTAAAAAAAAGC CCCGCCGAGGC CTG GCCTCGGCGGG AAAAAAAGCACCCCC TERM 1369 1633125 - 1633104 - H 100 -17.3 -5.40072 | TCGGCGGGAAAAAAA GCACCCCCC TAAC GGGGGGTGC GCTGCCGGCCAGAGC TERM 1370 1634728 - 1634706 - H 80 -9.1 -4.17132 | AAACTCTCCAACAAA TCAACGCCC TTAAC GGGCGTAGA GCTCAGATGCTTGGC TTHA1744 1634832 - 1635497 + | hypothetical protein TTHA1745 1635488 - 1635907 + | hypothetical protein TTHA1746 1636876 - 1635896 - | putative glycerol-3-phosphate acyltransferase PlsX TTHA1747 1637211 - 1636879 - | thioredoxin TERM 1371 1637259 - 1637233 - R 89 -17.3 -3.60627 | gap 1, opp_overlap 1637227 1637250, overlap 1637249 CTACTCTACGGCAAA CCCCCGGGGACG ACAA CG-CCCCGGGGG CGCCTTCCTCGGCCT TTHA1748 1637652 - 1637275 - | hypothetical protein TERM 1372 1637731 - 1637705 - R 86 -18 -2.98719 | overlap 1637722 CCACTATACCACATA GGGCCGGACCCC AGA AGGGTCCAGCCC CGCGAGGAGCTCGGC TTHA1749 1638172 - 1637693 - | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (FolK) TTHA1750 1639182 - 1638169 - | putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1751 1640177 - 1639179 - | putative glycosyltransferase TTHA1752 1641208 - 1640186 - | hypothetical protein TERM 1373 1640299 - 1640309 + g 78 -8.2 -4.4078 | overlap 1640286 1640285 AGGCGAGGAGGGCCT CCGC CCC GCGG TTTTGGTTGGGGCCG TTHA1753 1642331 - 1641186 - | glycosyltransferase TTHA1754 1643254 - 1642448 - | hypothetical protein TERM 1374 1642762 - 1642712 - G 73 -13.8 -3.3506 | CCCAAAGCCCCAGAA GCCCCAGCCGCCAAGCCAGAGGGC GTA GCCCTCCCCCTCGTAGGCCAGGGC CGCGACCACAGGTCT TERM 1375 1643227 - 1643201 - G 89 -10.8 -4.60041 | overlap 1643202 1643203 ACCCACGCCGAAAAA GCCCTGGGCCTG GGC CAAGCCCAGGAG GAGGAAAAGCGCCGA TERM 1376 1643226 - 1643202 - G 73 -14.3 -3.35542 | overlap 1643201 1643203 CCCACGCCGAAAAAG CCCTGGGCCTG GGC CAAGCCCAGGA GGAGGAAAAGCGCCG TERM 1377 1643225 - 1643203 - G 71 -15.6 -2.61004 | overlap 1643202 1643201 CCACGCCGAAAAAGC CCTGGGCCTG GGC CAAGCCCAGG AGGAGGAAAAGCGCC TERM 1378 1643379 - 1643337 - H 75 -9.6 -4.07568 | opp_overlap 1643342, overlap 1643338 GCGCCCGGGGCAAAA GCTGAGCCCGCCTGGGAAGC CTG GCTTCCCGGGCGTCCCCGGG GGCTTTTCTTTATGG TERM 1379 1643378 - 1643338 - H 70 -13.1 -3.04398 | opp_overlap 1643342, overlap 1643337 CGCCCGGGGCAAAAG CTGAGCCCGCCTGGGAAGC CTG GCTTCCCGGGCGTCCCCGG GGGCTTTTCTTTATG TERM 1380 1643342 - 1643382 + H 100 -16.8 -4.99043 | gap 1, opp_overlap 1643338 1643337 CGGGGCAAAAGCTGA GCCCGCCTGGGAAGCCTGG CTTC CCGGGCGTCCCCGG-GGGC TTTTCTTTATGGAGG TTHA1755 1643405 - 1644592 + | acetylornithine/acetyl-lysine aminotransferase TTHA1756 1644597 - 1644800 + | hypothetical protein TTHA1757 1645004 - 1646089 + | acetyl-lysine deacetylase TERM 1381 1646127 - 1646140 + GT 83 -9.5 -4.30576 | CCCCTGGCTGGCCCT GCCCC TCGG GGGGC TTTTCCTCCTGCCCG TERM 1382 1646507 - 1646535 + GT 73 -9.5 -3.88291 | opp_overlap 1646504 1646507 ACCTCCACCTAAGGA CCCCGCCGGAG GAGCCCG TTCCGCCGGGG TTTCTCGCCCTCCTG TTHA1759 1647463 - 1647137 - | hypothetical protein TTHA1758 1646104 - 1647282 + | GGDEF domain-containing protein TTHA1760 1648651 - 1647653 - | hypothetical protein TERM 1383 1647741 - 1647722 - G 75 -12.8 -3.59979 | overlap 1647723 CTCCCCCACCCCAAA CCCCCGCC CCAG GGCGGGGA GGAGGTACCAGGCGA TERM 1384 1648621 - 1648603 - G 82 -9.5 -4.3467 | overlap 1648584 1648579 1648605 AGGCGTAGAGCAAAA GCCCCAG CACCC CCGGGGC CAGGCGGCTTGCCTC TTHA1761 1649099 - 1648635 - | hypothetical protein TTHA1762 1649658 - 1649140 - | hypothetical protein TERM 1385 1649413 - 1649403 - G 71 -8.2 -4.13767 | overlap 1649404 CGGGCCAGCCCAAAA GGGG CTT CCCC CCGGCGTTGTGGGGG TTHA1763 1651014 - 1649668 - | molybdopterin oxidoreductase membrane subunit TTHA1764 1653637 - 1651007 - | molybdopterin oxidoreductase, iron-sulfur binding subunit TTHA1765 1654285 - 1653647 - | hypothetical protein TERM 1386 1654413 - 1654386 - R 77 -7.7 -4.34402 | gap 2, opp_overlap 1654386 1654403, overlap 1654401 GTCCCTATACGAAAA GGCCGC-C-CGGG AAGA CCCGAAAGCGGCC TCTTCGCCTTCGCTT TTHA1766 1655851 - 1654442 - | S-layer-like protein TTHA1767 1656870 - 1655920 - | acetyl-CoA carboxylase carboxyl transferase, alpha subunit (AccA) TERM 1387 1655991 - 1656013 + g 72 -13.4 -3.53444 | overlap 1656010 GGGCCTCCGGGGAGA GGCCCTTGAG CTC CTCCAGGGCC TTTAGGAGGGCCTCC TTHA1768 1657711 - 1656854 - | acetyl-CoA carboxylase carboxyl transferase, beta subunit (AccD) TTHA1769 1658082 - 1657711 - | hypothetical protein TTHA1770 1658983 - 1658084 - | M23/M37 family endopeptidase TERM 1388 1658239 - 1658206 - G 86 -18.2 -3.33492 | gap 1 CCACGTAGCCCAGAA GCCCGCCCCGGGCCA CCCGC TGGCCCGGG-CGGAC GGCCAGGCGGGAGAG TERM 1389 1659042 - 1659070 + rH 70 -8.8 -3.97368 | gap 2, opp_overlap 1658997, overlap 1659021 CGGGGTCGGCGCGGG GC-GG-CCCCGGTC TGG GCCCGGGGACCCGC TTTCTGGGTTCACCC TTHA1771 1660383 - 1659112 - | pyrimidine-nucleoside (thymidine) phosphorylase TERM 1390 1660851 - 1660887 + Gr 73 -10.7 -3.71649 | overlap 1660838 1660852 CCGGGGTGTACACGG AGCACCGCATTCTCCTC CCC GGGGAGGAGGCGGAGCC TTTGGCCTTTCCCGG TERM 1391 1660852 - 1660886 + Gr 71 -14.2 -2.82668 | overlap 1660838 1660851 CGGGGTGTACACGGA GCACCGCATTCTCCTC CCC GGGGAGGAGGCGGAGC CTTTGGCCTTTCCCG TTHA1772 1660364 - 1660924 + | hypothetical protein TERM 1392 1660929 - 1660958 + Tr 75 -9.2 -4.08945 | opp_overlap 1660925 CGTGGAGCTAAGCCC GCCCCACGGAGC CGAAAA GCTCCATGCGGC TTTTCACCACCTCCT TTHA1773 1661838 - 1660921 - | fructose-1,6-bisphosphate aldolase TERM 1393 1661669 - 1661714 + g 81 -8.9 -4.58773 | gap 1, overlap 1661632 1661629 1661670 CGGGTGAGGGCCCGG CCCCCGTACTTCATCGCCCCCT CGG AGAGGGCGA-GGATCACGGGGC TTTTCATTTCCTCGG TERM 1394 1661670 - 1661713 + g 70 -12.4 -3.34541 | gap 1, overlap 1661632 1661629 1661669 GGGTGAGGGCCCGGC CCCCGTACTTCATCGCCCCCT CGG AGAGGGCGA-GGATCACGGGG CTTTTCATTTCCTCG TTHA1774 1663063 - 1661957 - | pili retraction protein PilT TTHA1775 1663890 - 1663060 - | pantoate--beta-alanine ligase TERM 1395 1663541 - 1663500 - G 77 -5 -4.70319 | gap 2, overlap 1663501 GGACCAAAAGGAAAA GCCGCG-CCACCACC-GTGG CCAC CCCCTGGAAGTGGCCGGGGC GCACCGCCCCCTCCC TTHA1776 1664247 - 1663939 - | hypothetical protein TTHA1777 1664589 - 1664248 - | hypothetical protein TERM 1396 1664376 - 1664404 + g 80 -12.3 -4.08216 | TCTGGCCCGCGGTGG GCCGGGGGCGGAG GTC CTCCTCCTCCAGC TTTTCCAGGAGGTGC TTHA1778 1665693 - 1664596 - | LytR/CspA/Psr family protein TTHA1779 1666172 - 1665693 - | metal dependent phosphohydrolase TTHA1780 1666773 - 1666213 - | hypothetical protein TERM 1397 1666510 - 1666500 - G 71 -8.2 -4.07568 | overlap 1666501 CGTCCTGGGGGAAAA GGCG CCG CGCC TCGCGCAGGGTGTCC TERM 1398 1666723 - 1666695 - G 73 -6.7 -4.42386 | gap 1 GGTCCAGGCACAAAA CCTCCTGG-GCC TGGCTC GCCGCCAGGAGG TGGCCCAGGTGGATG obgE 1668024 - 1666774 - | GTPase ObgE TERM 1399 1667127 - 1667091 - G 73 -15.2 -3.18681 | gap 1, overlap 1667124 CTTTAAGGGCAGGAA GCCCCGC-TCCCGTGAG GGCG CTCACGGGAAGCACGGC GAGCCCCTCCCGGGC TERM 1400 1667759 - 1667745 - G 70 -12.8 -3.34398 | overlap 1667743 TGTCGGCGTCAAAGA CCCGGG TCC CCCGGG GAACCTCGATGACGA rpmA 1668291 - 1668034 - | 50S ribosomal protein L27 rplU 1668600 - 1668295 - | 50S ribosomal protein L21 TERM 1401 1668675 - 1668694 + r 80 -9.2 -4.25104 | opp_overlap 1668677, overlap 1668677 GTAACCGCAAGCTAA AACCCCCC TTTC GGGGGGTG TTTTGGTGGAGCCGA TERM 1402 1668692 - 1668677 - R 91 -11.8 -4.28432 | opp_overlap 1668677 1668675 AACCGCAAGCTAAAA CCCCCC TTTC GGGGGG TGTTTTGGTGGAGCC TERM 1403 1668677 - 1668692 + r 75 -11.8 -3.73042 | opp_overlap 1668677, overlap 1668675 AACCGCAAGCTAAAA CCCCCC TTTC GGGGGG TGTTTTGGTGGAGCC secG 1669163 - 1668810 - | preprotein translocase subunit SecG TERM 1404 1669188 - 1669207 + H 95 -16.4 -4.0616 | CCGGCTCCAGCCGAG GCCCCGGG CGCG CCCGGGGC TTTCTCCTTGCCCTC TERM 1405 1669268 - 1669296 + H 79 -7.4 -4.56597 | gap 1, overlap 1669270 1669271 AGGTTAGCTTAAGGG TAA-GCCCGGGCC ATAT GGCCCGGACGTTG TTTTTAGAGGAGGGC TERM 1406 1669270 - 1669293 + H 83 -9.4 -4.40561 | overlap 1669268 1669271 GTTAGCTTAAGGGTA AGCCCGGGCC ATAT GGCCCGGACG TTGTTTTTAGAGGAG TERM 1407 1669271 - 1669292 + H 73 -12.9 -3.23855 | overlap 1669270 1669268 TTAGCTTAAGGGTAA GCCCGGGCC ATAT GGCCCGGAC GTTGTTTTTAGAGGA TERM 1408 1669347 - 1669384 + G 74 -2.5 -4.65916 | opp_overlap 1669332, overlap 1669349 CGCCCCCTACACCTA CCGCATCCCCCGGCA GGGGAAGA TGCGGGTGGACGCCG TTTTCTTCGCCTCAA TERM 1409 1670725 - 1670706 - g 79 -7.8 -4.59773 | gap 1, overlap 1670707 GGGGATCGGGAAAAA GGTGGCCCG CCT CAGGCC-CC TCATCGTGGTCAAGG TTHA1785 1669315 - 1670745 + | hypothetical protein TERM 1410 1670780 - 1670748 - f 72 -14.2 -3.06261 | gap 1, opp_overlap 1670735 1670779, overlap 1670751 GGTCAAGGGGTAATA CCACCCCATGCTGGC TTGC GCCAGCATGGGG-GC CCCGGCAAAGGGCTT TERM 1411 1670778 - 1670751 - f 100 -21.4 -2.74999 | opp_overlap 1670735, overlap 1670748 CAAGGGGTAATACCA CCCCATGCTGGC TTGC GCCAGCATGGGG GCCCCGGCAAAGGGC TERM 1412 1670875 - 1670901 + F 73 -9.5 -3.91506 | gap 2, overlap 1670876 AGGTTTGGTTTCCTA GGAGGATGAGGCG GTT CGCC-C-TCCTCC TCTTTTTCGGCCTCG TERM 1413 1670876 - 1670903 + F 100 -10.6 -4.59773 | gap 1, overlap 1670875 GGTTTGGTTTCCTAG GAGGATGAG-GCG GTT CGCCCTCCTCCTC TTTTTCGGCCTCGCC TERM 1414 1671039 - 1671080 + G 91 -17.4 -3.75153 | gap 2, opp_overlap 1671074, overlap 1671041 GGGGTGGGCTGGGCC GAG-CCC-CTTGGGGCGGAG CTCC CCCCGCCCCAAGAGGGCCTC TTTCCCTTGGAGGCC TERM 1415 1671041 - 1671077 + G 85 -20.2 -2.6732 | gap 1, opp_overlap 1671074, overlap 1671039 GGTGGGCTGGGCCGA GCCC-CTTGGGGCGGAG CTCC CCCCGCCCCAAGAGGGC CTCTTTCCCTTGGAG TTHA1786 1670880 - 1672343 + | hypothetical protein TERM 1416 1673057 - 1673015 - g 73 -10.4 -3.75169 | gap 1, overlap 1673016 GAGGAGGCCAGGAAA CGCCTCCGCCCCAGGCCTC GAGGCG GGGGCCCGGCGCGGGGG-G TGCCCTGGAGGAGAA TTHA1787 1672360 - 1673280 + | hypothetical protein TTHA1788 1673587 - 1673258 - | hypothetical protein TTHA1789 1674089 - 1673616 - | molybdenum cofactor biosynthesis protein C TTHA1790 1674693 - 1674235 - | 2-C-methyl-D-erythritol 2,4-cyclodiphoshate synthase TTHA1791 1674710 - 1675267 + | hydrolase TTHA1792 1675317 - 1675646 + | hypothetical protein TTHA1793 1676005 - 1675679 - | hypothetical protein TERM 1417 1675831 - 1675799 - G 70 -14.1 -3.24188 | GGAGATGAGGACGAA GAGGAGGTCGCCGAG CTC CTCGGCGAGGTCCCC CTCCGCCTCCCCCGG mgsA 1676172 - 1676552 + | methylglyoxal synthase TTHA1795 1676612 - 1677028 + | MutT/nudix family protein TERM 1418 1677333 - 1677320 - g 82 -9.5 -4.36914 | overlap 1677322 GGCCGCCCTAGAAAA GGCCC TGGA GGGCC AGGCCTTCGGGAGCT TERM 1419 1677449 - 1677439 - g 85 -8.2 -4.74103 | opp_overlap 1677445 1677445 TCGTGAAGGGAAAAA CGGG CGC CCCG GTGCGGCTCAAGGGG TTHA1796 1677039 - 1678259 + | thiamine biosynthesis protein ThiI TTHA1797 1678246 - 1679550 + | amidase TTHA1798 1680732 - 1679542 - | transport protein TTHA1799 1681294 - 1680710 - | hypothetical protein TTHA1801 1683043 - 1682354 - | hypothetical protein TTHA1800 1681315 - 1682409 + | hypothetical protein TERM 1420 1682954 - 1682933 - Gf 72 -11.5 -3.55071 | GTAGAGGGGGGGAAA GCGCCGCCA GGTG TGCCGGCGC CTCGTCCGAAGCCGC TTHA1802 1683223 - 1683414 + | hypothetical protein TERM 1421 1683537 - 1683505 - f 72 -11.9 -3.50853 | opp_overlap 1683509, overlap 1683509 CCCCCGCAACCAGAA CCAAGCCCCGGACAC CAT GGGTCCGGGGCTTTT CCCTTACCCTGGAAG TERM 1422 1683533 - 1683509 - f 89 -17.1 -3.5002 | opp_overlap 1683509, overlap 1683505 CGCAACCAGAACCAA GCCCCGGACAC CAT GGGTCCGGGGC TTTTCCCTTACCCTG TERM 1423 1683509 - 1683533 + F 100 -17.1 -4.2803 | opp_overlap 1683509 1683505 CGCAACCAGAACCAA GCCCCGGACAC CAT GGGTCCGGGGC TTTTCCCTTACCCTG TERM 1424 1683714 - 1683671 - g 77 -10.3 -4.11216 | gap 2 GGCCGAGCGGGAAAA CCACCACC-CCCG-CCTCACC GTGG AGTGGGGCCGGGTGACGGTGG AGTGGTGGACCCACT TTHA1803 1683555 - 1683797 + | pterin-4-alpha-carbinolamine dehydratase TTHA1804 1683810 - 1684187 + | acyl-CoA thioesterase TTHA1805 1684171 - 1684509 + | hypothetical protein TTHA1806 1684475 - 1685278 + | MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg) TTHA1807 1686765 - 1685275 - | ABC transporter, permease protein TERM 1425 1686014 - 1685965 - G 70 -9.3 -3.72592 | gap 3, overlap 1685952 1685967 1685968 AACCCCGAGGAAGAA GACCCCCATCCC-CAGGGCCAAGG CCCAC CCCCGCCCCCGCGGGA-GGGGG-C GGGGCGGAACGGGGG TERM 1426 1686013 - 1685967 - G 72 -13 -3.44284 | overlap 1685952 1685965 1685968 CCCCGAGGAAGAAGA CCCCCATCCC-CAGGGCCAAGG CCCAC CCCCGCCCCCGCGGGA-GGGGG CGGGGCGGAACGGGG TERM 1427 1686419 - 1686396 - G 76 -7.3 -4.37886 | overlap 1686414 CCAGGTTGTAGAAAA GGGCGGCCC AGTAGA GGACGGCCC GGGTGCCGTAGAGGT TTHA1808 1687806 - 1686772 - | ABC transporter, periplasmic substrate-binding protein TTHA1809 1688783 - 1687923 - | proline iminopeptidase-related protein TERM 1428 1688269 - 1688216 - GR 74 -8 -4.27316 | gap 2 CGTCCGAACCCAAAA TCCCCGCCCCCTCGGCGAGCCACTCG TAGG CCATCCGCCC-CCG-GGGGGTGGGGA ACATGAGGCGGTCAA TERM 1429 1688660 - 1688618 - GR 82 -17.1 -3.00525 | gap 1, overlap 1688613 1688621 GCTGGTCAAAGTAGA CCACGCGGAAGCCCTCCAGG TAGT CCTGGAGGCCTTCC-CGCAG GACGTAGGCGTTCCC TERM 1430 1688657 - 1688621 - GR 80 -17.4 -2.7314 | gap 1, overlap 1688618 1688613 GGTCAAAGTAGACCA CGCGGAAGCCCTCCAGG TAGT CCTGGAGGCCTTCC-CG CAGGACGTAGGCGTT TTHA1810 1688992 - 1688753 - | hypothetical protein TTHA1811 1689591 - 1688989 - | fuculose-1-phosphate aldolase TERM 1431 1689137 - 1689096 - G 91 -20.2 -3.29511 | gap 1, opp_overlap 1689085 CGTAGGCCTCGAGAA GGGCCTCCTCCG-GGGCCT CCTTC AGGCCCACGGCGAAGGCCC CGTGCCCCCTCAGGA TERM 1432 1689334 - 1689303 - G 73 -15.8 -2.90901 | AGAGGTGGAAGGAGA GGGCCACGGCCACC CGGG GGTGGGCGTGGACC AGGGCCCGGGCCCCG TERM 1433 1689635 - 1689613 - R 100 -17.7 -4.58663 | ATTATGCCGGAAAAA GGCCCCCGG GGAAA CCGGGGGCC TCCACCTTGCGGGGC TTHA1812 1694229 - 1689655 - | DNA-directed RNA polymerase beta' chain (RpoC) TERM 1434 1693497 - 1693519 + g 70 -13.4 -3.32268 | overlap 1693455 1693454 GGTAGGGCTCGGGGA GCTCGGCGAG GAT TTCGCCGGGC TTGTAGGCCTCCTTC rpoB 1697618 - 1694259 - | DNA-directed RNA polymerase subunit beta TERM 1435 1696389 - 1696347 - G 82 -14.7 -3.59979 | gap 1, opp_overlap 1696340 1696384 GTCGCGCACGTCAAA CCCCGCCC-GCTCCCGGGTG AGGC CGCCCGGGCCCAGGGCGGAG ATCCGCCGCTTGTGG TTHA1814 1698449 - 1697808 - | hypothetical protein TTHA1815 1698877 - 1698449 - | (3R)-hydroxymyristoyl-acyl carrier protein dehydratase TTHA1816 1699921 - 1698884 - | rod shape-determining protein MreB TTHA1817 1701657 - 1699933 - | hypothetical protein TERM 1436 1700277 - 1700302 + g 76 -16.9 -2.73364 | CGTTGTCGGGGTCGT GGTGGTGGGCG ATGG CGTCCACCACC TCCTTGGGCTCCCCG TERM 1437 1701339 - 1701355 + g 76 -3.6 -4.62069 | overlap 1701340 CCTTGAGGCGTTCCC CCGCCT CCTCC AGGCGC TTTTTGGCCTCGGCC recA 1702680 - 1701658 - | recombinase A TTHA1819 1703227 - 1702631 - | 2'-5' RNA ligase TERM 1438 1702938 - 1702894 - GR 71 -12.8 -3.28712 | gap 1, overlap 1702895 CCTCCTCGCCCAGAA GC-TCCTCCACCCCGGCGCGA AGCC CCTCGGCGAGGCGGAGGAAGC CCTCGGCCTCCGCCT TTHA1820 1704408 - 1703224 - | competence/damage-inducible protein CinA TERM 1439 1703996 - 1704019 + gr 95 -10.9 -4.57073 | overlap 1703998 CCTTTGCGCACCCAC CACCCGGGG GCGGTG CCCCGGGGG TTTTTGAGCCAGGTG TERM 1440 1703998 - 1704018 + gr 75 -13.9 -3.33922 | overlap 1703996 TTTGCGCACCCACCA CCCGGGGGC GGT GCCCCGGGG GTTTTTGAGCCAGGT TERM 1441 1704263 - 1704222 - GR 80 -15 -3.45849 | overlap 1704223 CGGAGAGGACCACAA GCCTGGCCCGGGCGAAGG CCTCCT CCACCTCCCGGGCCAGGG GCGCCACCTCGTCCG TERM 1442 1704262 - 1704223 - GR 87 -18.5 -2.67188 | overlap 1704222 GGAGAGGACCACAAG CCTGGCCCGGGCGAAGG CCTCCT CCACCTCCCGGGCCAGG GGCGCCACCTCGTCC TTHA1821 1705166 - 1704381 - | hypothetical protein TERM 1443 1704543 - 1704533 - GH 72 -8.2 -4.07687 | AGGGGGTTTCTAAAA GGCG CTT CGCC TCGCCCACGCGCTTT TERM 1444 1705541 - 1705566 + G 71 -9 -4.08216 | CAGCCTCGTGGGGGA GCTTTACCCG GAAAGG CGGGTGGAGC TTTTGAACCGGGTCA TERM 1445 1705742 - 1705729 - g 73 -9.5 -3.95042 | opp_overlap 1705738, overlap 1705718 AAAAGCCTAAGGAAA GGCCC CGGG GGGCC CTCTGGCCCTTCCTC TTHA1822 1705197 - 1706246 + | transporter TTHA1823 1706239 - 1706865 + | putative hydrolase (phosphatase) TTHA1824 1707945 - 1706851 - | chloromuconate cycloisomerase TTHA1825 1708667 - 1707954 - | hypothetical protein TTHA1826 1708700 - 1709197 + | hypothetical protein TTHA1827 1709201 - 1710046 + | sugar ABC transporter permease protein TTHA1828 1711008 - 1710025 - | hypothetical protein TTHA1829 1711435 - 1711028 - | hypothetical protein TTHA1830 1712099 - 1711416 - | hypothetical protein TERM 1446 1712120 - 1712142 + r 76 -14.8 -3.16564 | CATTCTAGGGGAGGA GGCCGGGGAG GGC CTCCCGGGCC TTCCTGGGGTCCAGG TTHA1831 1714757 - 1712109 - | alanyl-tRNA synthetase TERM 1447 1712432 - 1712467 + g 75 -14 -3.57263 | gap 1, overlap 1712433 AAGCCCCCCCGCCGC CCCCCAAGG-CCGCCTG GAC CAGGCGGGCCTTGAGGC TTTCCACCTCCCGCT TERM 1448 1712433 - 1712466 + g 76 -17.5 -2.74144 | gap 1, overlap 1712432 AGCCCCCCCGCCGCC CCCCAAGG-CCGCCTG GAC CAGGCGGGCCTTGAGG CTTTCCACCTCCCGC TTHA1832 1714781 - 1715065 + | hypothetical protein TERM 1449 1715978 - 1716010 + G 83 -17 -3.29144 | TCATGCGCGCCCTGG GGGCGAGGCGGGGG TTCAT CTTCCGCCTCGTCC TTCTGGAGGCCCTCC TTHA1833 1715110 - 1716252 + | ABC transporter, permease protein TTHA1834 1716253 - 1716936 + | ABC transporter, ATP-binding protein TERM 1450 1718189 - 1718232 + G 82 -13 -4.11216 | opp_overlap 1718189, overlap 1718190 GGCCCTGCGCATAGA CGTCCTCGCCGCCCTCCTCC ACCG GGAGGGGAGCGTGGAGGACC TTTTGGCCCTGGACC TERM 1451 1718190 - 1718231 + G 75 -16.5 -3.06515 | opp_overlap 1718189, overlap 1718189 GCCCTGCGCATAGAC GTCCTCGCCGCCCTCCTCC ACCG GGAGGGGAGCGTGGAGGAC CTTTTGGCCCTGGAC TTHA1835 1716984 - 1718315 + | NADH oxidase TTHA1836 1718462 - 1719769 + | isocitrate lyase TERM 1452 1719788 - 1719807 + F 100 -16.4 -5.00616 | opp_overlap 1719788 GGCGGTGTGCAAAAA GGCCGGGG TGTG CCCCGGCC TTTTTTGCACCGGCC TERM 1453 1719807 - 1719788 - f 100 -16.4 -4.56597 | opp_overlap 1719788 GGCGGTGTGCAAAAA GGCCGGGG TGTG CCCCGGCC TTTTTTGCACCGGCC TERM 1454 1721416 - 1721432 + G 71 -6.5 -4.25104 | opp_overlap 1721416 1721415 CCTCCTGGACGAAAC GGCCC GGGCGGA GGGCC TTTTGGTGCGGGCCG TERM 1455 1721506 - 1721479 - g 75 -14.1 -3.44051 | opp_overlap 1721500 GGGGGATTACGAGAA GGCGGCCCGCT ACGCCG AGCGGGCGGCC GAGCTCTCCGTGGCC TTHA1837 1719842 - 1722598 + | hypothetical protein TERM 1456 1722978 - 1723031 + G 73 -14.4 -3.28924 | overlap 1722979 GTGACCATCGCCAAC TTCCTCCGCCTCGCCCTCCAGGCC AAGCTC GGCCGGGAGGTGGGGGTGGCGGAG TTCTGGACCAAGGTG TERM 1457 1722979 - 1723030 + G 71 -15.7 -2.57211 | overlap 1722978 TGACCATCGCCAACT TCCTCCGCCTCGCCCTCCAGGCC AAGCTC GGCCGGGAGGTGGGGGTGGCGGA GTTCTGGACCAAGGT TTHA1838 1722681 - 1723433 + | SufC protein ATP-binding protein TTHA1839 1723430 - 1724836 + | SufB protein membrane protein TERM 1458 1724849 - 1724871 + F 100 -20.6 -5.00616 | opp_overlap 1724839 1724838 TAAAGGCCGAGCCTT GGGGGAGGCC CTG GGCCTCCCCC TTTTTTCGGGAGGAA TTHA1840 1724889 - 1726184 + | SufD protein membrane protein TERM 1459 1726249 - 1726225 - g 71 -9.2 -4.11216 | overlap 1726226 CGGCGAGTTCCAAAA CGGCCGCCTC GTGGT GAAGCGGCCT GAGCACAGGAAGCCC TTHA1841 1726187 - 1726489 + | putative dioxygenase ferredoxin subunit TTHA1842 1727475 - 1726486 - | anthranilate phosphoribosyltransferase TERM 1460 1726566 - 1726586 + g 100 -14.7 -4.56775 | CCCGGGCCAGCGCCA CCCCCTCCT TCA GGGAGGGGG TTTTTCCCGCGGCGT TERM 1461 1726711 - 1726732 + g 75 -13.7 -3.53444 | overlap 1726685 GGGGCCTCCGCCTTT GAGGGCCTC GAGG GGGGCCCTC TTTAGGCCCACCTCC TTHA1843 1728077 - 1727463 - | anthranilate synthase component II TTHA1844 1729511 - 1728123 - | anthranilate synthase component I (TrpE) TERM 1462 1729040 - 1729023 - G 82 -12.7 -4.07568 | opp_overlap 1729031, overlap 1729025 CCTCTCCGCCCAAAA GAGGCGG GCCT CCGCCTC CTCGGGGTCCCTCCC TERM 1463 1729031 - 1729077 + g 100 -21.5 -3.66018 | opp_overlap 1729023 1729025 CCCAAAAGAGGCGGG CCTCCGCCTCCTCGGGGTCCC TCCCT GGGGCCACGAGGTGGAGGAGG TTCTTCAGGTGGTCA TERM 1464 1729552 - 1729531 - R 100 -12.9 -4.85782 | overlap 1729532 TCCCCCAAAAACAAA GCCCCGGGG TGTG CCCCGGGGA AAGGCCTCCCGCCCC TERM 1465 1729551 - 1729532 - R 86 -16.4 -3.50746 | overlap 1729531 CCCCCAAAAACAAAG CCCCGGGG TGTG CCCCGGGG AAAGGCCTCCCGCCC TTHA1845 1729608 - 1729573 - | trp operon leader peptide TTHA1846 1730049 - 1729648 - | putative thioesterase TERM 1466 1731887 - 1731933 + G 80 -11.5 -4.08216 | overlap 1731892 CTGGCTCTGGGAGAG GGCCTTCCCCCTTCCCCTC CTCGCCTTT GAGGCGGGGGAGGAGGGCC TTTTGGAAGCCCTCC TTHA1847 1730100 - 1732364 + | hypothetical protein TTHA1848 1732434 - 1733711 + | hypothetical protein TERM 1467 1734647 - 1734690 + G 73 -13.8 -3.32343 | gap 1, opp_overlap 1734628 CTACGTGGCCTGCCT CTACGGGGCCGAGGCCC-CAA GGC TCGAGGCCCTCGGCCCCCTGG TTCTGGACCTGTACC TTHA1849 1733793 - 1735211 + | hypothetical protein TTHA1850 1735370 - 1736113 + | hypothetical protein TTHA1851 1736150 - 1736494 + | hypothetical protein TTHA1852 1736520 - 1738211 + | oligoendopeptidase F TTHA1853 1738236 - 1738688 + | arsenate reductase TTHA1854 1739347 - 1738685 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 1468 1739882 - 1739906 + G 79 -5.5 -4.72272 | CCTCCTCCTCGCCCG GGTGTTCTCCC CGG GGGGGCTCGCC TTTTTGGTGCGGAGG TTHA1855 1739439 - 1741253 + | ABC transporter, permease protein TTHA1856 1741250 - 1742173 + | ABC transporter permease protein TTHA1857 1742418 - 1742161 - | hypothetical protein TERM 1469 1742277 - 1742255 - G 76 -7.7 -4.36914 | gap 1, overlap 1742260 CCGTTTTCCAGAAAA GCGAAGC-CC TGGA GGCGCTCCGC CCCCACCCCCTGGGC TTHA1858 1742951 - 1742415 - | oxidoreductase TTHA1859 1743715 - 1742948 - | PSP1-related protein TERM 1470 1743053 - 1743074 + g 70 -2.1 -4.56597 | overlap 1743054 CTTGCCGCAGAGGCC GGCCTTGGT GCAG ACCCGGGCG TTTTTCCGGGGAAGC TTHA1860 1744518 - 1743712 - | DNA polymerase III delta prime subunit TTHA1861 1745207 - 1744485 - | phosphatase TERM 1471 1745652 - 1745601 - g 80 -17.8 -2.90075 | CCGGGGGGAAGGAGA CGGAGGCGGGCTGGCGGCCCCTCG AGGC CGAGGGCGCGCCCCTCCACCTCCG GGTGCGAAGCCCCAC TTHA1862 1745222 - 1745851 + | hypothetical protein TTHA1863 1745862 - 1746062 + | hypothetical protein TERM 1472 1746644 - 1746623 - g 74 -2.9 -4.65895 | overlap 1746624 1746625 1746636 CCCTGGAGGCAAAAA GGCTTGAGG AAAA CCTCAAGGG GACGGAAGCCTCCCT TERM 1473 1746663 - 1746636 - g 71 -6.2 -4.25848 | overlap 1746625 1746624 1746623 AAGGCTTGAGGAAAA CCTCAAGGGGAC GGAA GCCTCCCTGAAG ACTCTGGAGGAGCGC TTHA1864 1746121 - 1747440 + | S-layer protein-related protein TTHA1865 1748822 - 1747449 - | serine protease precursor TERM 1474 1747633 - 1747623 - G 70 -2.4 -4.56597 | overlap 1747625 GGTCCTCGCGAAAAA GGCC ACG GGTC CCACGAGGGTCACGT TERM 1475 1748042 - 1748016 - G 73 -6.5 -4.46212 | GCCCGCAGGATAAAA GCGGGCCAC ACTCCCCTG GTTGCCCGC GGCGGCCACCACCAC TERM 1476 1748501 - 1748536 + g 79 -14 -3.58522 | gap 1 AGGGGCTCACCCCCT GGGGCTGCAGG-CCCTC TGG GAGGGGCCGGTAGTCCC TTTGACCCTCCTCCT TERM 1477 1748753 - 1748731 - G 70 -13.4 -3.34222 | AGGACCAGGGCAGAA GGGGGGAAGG GGT CCTTGCCCCC GTGGGAAGGCAGCCC TTHA1866 1750090 - 1748819 - | hypothetical protein TERM 1478 1749573 - 1749553 - G 77 -14.7 -3.53012 | TGGTGGCCCCGGAAA GCCCCCTGG GGT CCAGGAGGC GGTAGCCGGTGTCCC TERM 1479 1750127 - 1750098 - RH 93 -15.7 -4.13767 | opp_overlap 1750125, overlap 1750101 1750103 GGGCGCACGGGAAAA GTATACCCGGCGG GAAT CCGCCGGGTACCC CTAAGGGGGTGGGGG TERM 1480 1750124 - 1750101 - RH 86 -18.2 -3.09831 | overlap 1750098 1750103 CGCACGGGAAAAGTA TACCCGGCGG GAAT CCGCCGGGTA CCCCTAAGGGGGTGG TERM 1481 1750122 - 1750103 - RH 81 -16.4 -3.10537 | overlap 1750101 1750098 CACGGGAAAAGTATA CCCGGCGG GAAT CCGCCGGG TACCCCTAAGGGGGT TTHA1868 1753692 - 1751386 - | extracellular serine protease TTHA1867 1750258 - 1751478 + | transposase TERM 1482 1752705 - 1752727 + gT 95 -19.2 -2.82516 | CCTGAGCGGGGTTGG CGTTCCGGGG CAC CCCCGGAACG TCTACTCCTGCAGCC TERM 1483 1753855 - 1753893 + Tr 100 -23.3 -3.21099 | gap 2, overlap 1753858 GGTGAAGTCCGGGGA GGT-GC-CCCCACCCCCCC CAG GGGGGGGTGGGGCGCTACC TTCCTGCTAGCACCC TERM 1484 1753858 - 1753889 + Tr 100 -23.8 -2.57795 | gap 1, overlap 1753855 GAAGTCCGGGGAGGT GC-CCCCACCCCCCC CAG GGGGGGGTGGGGCGC TACCTTCCTGCTAGC TTHA1869 1754254 - 1753889 - | hypothetical protein TERM 1485 1754358 - 1754300 - R 100 -27.5 -3.53224 | gap 2, overlap 1754301 GAGGGTCCCGGCAAA GCCGCCGCCCCCCGAAGGCGGTGGGGGCG TCC CACCCCCTCCACCTCCAGGGGGCGG-GG- TGGGCAGGCCGACGA TERM 1486 1754358 - 1754301 - R 100 -33.5 -2.71791 | gap 1, overlap 1754300 AGGGTCCCGGCAAAG CCGCCGCCCCCCGAAGGCGGTGGGGGCG TCC CACCCCCTCCACCTCCAGGGGGCGG-GG TGGGCAGGCCGACGA TTHA1870 1754971 - 1754480 - | hypothetical protein TERM 1487 1755153 - 1755114 - R 79 -4.8 -4.82901 | gap 1, opp_overlap 1755118 1755145 GGGGCCTTACAAAAA TCTTAACTC-CCCCCCGCC ACG GCCGGGGGGAGCGTCTTGA CCCCTAAAAGGCCAT TTHA1871 1756197 - 1755157 - | hypothetical protein TTHA1872 1756289 - 1756191 - | hypothetical protein TERM 1488 1756436 - 1756401 - R 78 -13.8 -3.53811 | overlap 1756406 TCCACTCCCGGCAAA GGCAACCCCCCGCCCC GTGG GGGGCGGGGGGCGGGG CTCGGCCCTAGGCTA TERM 1489 1756431 - 1756406 - R 100 -23.3 -3.27525 | overlap 1756401 TCCCGGCAAAGGCAA CCCCCCGCCCC GTGG GGGGCGGGGGG CGGGGCTCGGCCCTA TTHA1873 1756979 - 1756449 - | hypothetical protein TTHA1874 1759916 - 1757052 - | hypothetical protein TTHA1875 1760105 - 1762084 + | threonyl-tRNA synthetase TTHA1876 1762088 - 1762870 + | repressor, phenylacetic acid catabolic pathway TTHA1877 1762881 - 1764065 + | sugar ABC transporter, periplasmic sugar-binding protein folE 1764740 - 1764078 - | GTP cyclohydrolase I TTHA1879 1765429 - 1764737 - | ferripyochelin-binding protein TERM 1490 1765079 - 1765094 + g 72 -3.2 -4.60487 | CGGCACCACCGCCCC CGCC CCCACCAC GGCG TTTTTGCCGATCCTC TTHA1880 1765790 - 1765410 - | MutT/nudix family protein TTHA1881 1766644 - 1765781 - | hypothetical protein TERM 1491 1766002 - 1765970 - G 89 -11.1 -4.57073 | overlap 1765972 CACCCCCTGGAAAAA GCGCACCTCCTCCTC GGT GAGGGGGCGGCGCCC CTTGGGCCGTTCAAA TERM 1492 1766926 - 1766902 - g 100 -14.2 -4.54727 | overlap 1766903 GGCGGTAAAGGAAAA TCGGGGGCGG CTTCC CCGCCCCCGG GCACCCTTAGGGCTA TERM 1493 1766925 - 1766903 - g 86 -17.7 -3.32354 | overlap 1766902 GCGGTAAAGGAAAAT CGGGGGCGG CTTCC CCGCCCCCG GGCACCCTTAGGGCT TTHA1882 1766752 - 1766994 + | hypothetical protein TTHA1883 1767819 - 1767124 - | hypothetical protein TERM 1494 1768141 - 1768107 - g 75 -12.8 -3.60627 | opp_overlap 1768093 GGAGGCGAGGGCAAA GGGGGGCCTCGTCC TCTTCCT GGACGAGGTCCACC GCTTCAACAAGGCCC TERM 1495 1768857 - 1768824 - g 81 -8.7 -4.56597 | gap 1, overlap 1768802 CGCCGCCTGGAAAAA GGCCCAGGAGGCGGCC AAG GCCCACC-CCGAGGCC GAGGTCCCCCTGAAC TTHA1884 1767832 - 1769097 + | recombination factor protein RarA TTHA1885 1769617 - 1769048 - | hypothetical protein TERM 1496 1769548 - 1769516 - G 86 -17.7 -3.35679 | CGCCCCCAGGGAGAA CTCCGCCCCCCGG GCGGGCT CCGGGGGGCGCAG CATGGCCACGGGGAG TTHA1886 1770429 - 1769644 - | ABC transporter, permease protein TERM 1497 1769906 - 1769874 - G 84 -10.6 -4.19238 | CGGCGAAGGCCAAAA CCCCGGC-CGCCACCA GGG TGG-GGCGCACCAGGG GGAGGAGGATGCGGA TERM 1498 1771142 - 1771123 - g 74 -4.2 -4.60924 | gap 1, overlap 1771112 GAAAGCCCCCAAAAA GGC-TCGGC AAC GCCCACGCC CAGATCGTCCCCTAC TTHA1887 1770459 - 1771682 + | CAIB/BAIF family protein TERM 1499 1772008 - 1771969 - g 76 -7.7 -4.3898 | opp_overlap 1771994, overlap 1771970 AGGACGTCCACAAAA GCC-CCGCCGCCCGCCGCC ACCT GGGGGCGGT-GGTGGAGGC CCCGGCCGCCTTTTA TERM 1500 1771994 - 1772018 + G 71 -9.1 -4.11692 | opp_overlap 1771970 1771969 CCGCCGCCACCTGGG GGCGGTGGTGG AGG CCCCGGCCGCC TTTTACCCCTACCTC TTHA1888 1771761 - 1772639 + | ABC transporter, ATP-binding protein TTHA1889 1772632 - 1773402 + | hypothetical protein TTHA1890 1774463 - 1773399 - | aminopeptidase TERM 1501 1775044 - 1775006 - g 79 -16.1 -3.28712 | gap 2, overlap 1775042 CCCCCGGCCCCAGAA CCCCTCCCCC-CCTG-GCC CCA GGCCCAGGCGGAGGAAGGG ATCGCGGCGGCCCCC TERM 1502 1775260 - 1775306 + G 79 -17.3 -3.01712 | overlap 1775285 CGTGGGCCAGGTGGA GGGCGAGGAGGTGCGGGGG CTTAAGCCT TCCCCGAGCTTCCTCGCCC TCTTCCGGGAGGCGG TERM 1503 1775285 - 1775340 + G 84 -19 -2.89267 | gap 1, opp_overlap 1775333, overlap 1775260 1775333 GTGCGGGGGCTTAAG CCTTCCCCGAGCTTCCTCGCCCTCTTC CGG GAGGCGGGCGGGGAGGAA-GGGGAAGG TCTCCTCTGCTTCCA TTHA1891 1774484 - 1775506 + | hypothetical protein TTHA1892 1777511 - 1775514 - | excinuclease ABC subunit B TERM 1504 1777593 - 1777567 - R 100 -22.3 -5.18726 | overlap 1777552 1777548 GGGGGAGAACAAAAA CCCCCGCCCCC TTTGG GGGGGCGGGGG CGGGACCGCCAGGGT TTHA1893 1780394 - 1777608 - | S-layer protein precursor (P100 protein) TTHA1894 1780705 - 1780541 - | hypothetical protein TTHA1895 1780897 - 1781586 + | hypothetical protein TERM 1505 1781868 - 1781921 + F 85 -12.9 -4.09243 | opp_overlap 1781870, overlap 1781869 1781917 GCGTATCCAGAGGGA AACCGCCGGGAAGAAGGCGCAGCCC TTGG GGGCTTCGGCCCCTTCCCGGTGGCC TTTTGAGGCCATATG TERM 1506 1781869 - 1781920 + F 79 -16.4 -3.05224 | opp_overlap 1781870, overlap 1781868 1781917 CGTATCCAGAGGGAA ACCGCCGGGAAGAAGGCGCAGCCC TTGG GGGCTTCGGCCCCTTCCCGGTGGC CTTTTGAGGCCATAT TERM 1507 1781919 - 1781870 - f 100 -22.1 -3.71873 | opp_overlap 1781869 1781868 1781917 GTATCCAGAGGGAAA CCGCCGGGAAGAAGGCGCAGCCC TTGG GGGCTTCGGCCCCTTCCCGGTGG CCTTTTGAGGCCATA TERM 1508 1783286 - 1783273 - g 72 -5.2 -4.37092 | AGGTCTTGGAGAAAA GGCC CCTCGT GGCC CACGTGGCCGAGAAG TTHA1896 1781934 - 1783748 + | glucosamine--fructose-6-phosphate aminotransferase [isomerizing] TERM 1509 1783870 - 1783906 + TF 100 -17.9 -4.16943 | CTTCACGGCCCGCCA GGCTTTCCCCTGGGCCC CAA GGGCCCAGGGGTTAGGC TTTTAGCGTATGGCG TTHA1898 1785508 - 1784531 - | A/G-specific adenine glycosylase (MutY) TTHA1897 1783916 - 1784614 + | GidA-related protein TERM 1510 1784941 - 1784959 + gT 72 -11.6 -3.53012 | opp_overlap 1784927, overlap 1784942 AGGCCCCTAGGGGGC AGGCCCCG CAA CGGGGCCG TTTCGGCAGGCAGAC TERM 1511 1784942 - 1784958 + gT 72 -15.1 -2.71712 | opp_overlap 1784927, overlap 1784941 GGCCCCTAGGGGGCA GGCCCCG CAA CGGGGCC GTTTCGGCAGGCAGA TTHA1899 1785933 - 1785511 - | hypothetical protein TERM 1512 1785809 - 1785771 - G 82 -13.3 -4.07568 | CCTCCTCCCCGAAAA GC-TCCTCCCCCTGGAACC TGG GGTTC-ACGGGGAGGACGC GGTAGCCCTGTTCCC TTHA1900 1786775 - 1785930 - | NH(3)-dependent NAD(+) synthetase TTHA1901 1787640 - 1786762 - | carbon-nitrogen hydrolase family protein TTHA1902 1789202 - 1787640 - | hypothetical protein TTHA1903 1790016 - 1789207 - | acetylglutamate kinase TERM 1513 1789721 - 1789698 - G 86 -7.4 -4.82901 | gap 1, overlap 1789699 1789719 TGCGGCCCACAAAAA GCC-TTCCGTC CAA GCCGGAAAGGC CGATGGCGTTCGCCC TERM 1514 1789860 - 1789888 + g 73 -11 -3.7732 | opp_overlap 1789858, overlap 1789860 GGTGGGTGAGGAAGC GG-GGCGGGTGGCC CAG GGCC-TCCGCCACC TTGTTGGTCTCGGCG argC 1791084 - 1790047 - | N-acetyl-gamma-glutamyl-phosphate reductase TTHA1905 1791445 - 1791074 - | hypothetical protein TTHA1906 1791737 - 1791417 - | hypothetical protein TTHA1907 1792576 - 1791734 - | lysine biosynthesis enzyme LysX TERM 1515 1792172 - 1792126 - G 75 -13.4 -3.61398 | CCTTGTGCTCAAGAA GGGCCTCCGCCGCGGCCCGGTC CGT GACCTTGGCGAGGAGGCGGCCC CAGCTCCCGATCACG TERM 1516 1792554 - 1792531 - G 70 -12.4 -3.34398 | overlap 1792529 CCGCCCGCTCAAAGA GCATCCGCTC GTCG GGGCGGATGC GGTCGTAGAGGATGG TTHA1908 1792845 - 1792681 - | hypothetical protein TTHA1909 1793153 - 1792839 - | hypothetical protein TTHA1910 1793654 - 1793163 - | 3-isopropylmalate dehydratase small subunit TTHA1911 1794909 - 1793647 - | 3-isopropylmalate dehydratase large subunit TTHA1912 1794926 - 1795150 + | hypothetical protein TTHA1913 1795140 - 1795346 + | hypothetical protein TTHA1914 1796479 - 1795349 - | homocitrate synthase TERM 1517 1796520 - 1796501 - R 100 -16.4 -5.07652 | opp_overlap 1796511 1796513 CTCCCCAAAAGAAAA CCGGCCCG AACC CGGGCCGG GGGATAAGAAGCCCT TERM 1518 1796511 - 1796566 + r 95 -9.7 -5.00616 | gap 3, opp_overlap 1796501 1796531, overlap 1796513 GAAAACCGGCCCGAA CCCGG--GCCGGGGGATA-AGAAGCCCT TGG AGGGCTACCCTACCCCCCGGCGGCCGAG TTTTTTCGCGCGGGC TERM 1519 1796543 - 1796531 - R 71 -9.1 -3.78934 | opp_overlap 1796513 1796511 GCCGGGGGATAAGAA GCCCT TGG AGGGC TACCCTACCCCCCGG TTHA1915 1797414 - 1796623 - | undecaprenyl pyrophosphate synthetase TTHA1916 1798568 - 1797450 - | acyl-CoA dehydrogenase TERM 1520 1798145 - 1798168 + g 74 -9.4 -4.13767 | overlap 1798146 CGAACCCGCCCTTGA CCCGCCGCGC CTCG GCGCGGAGGC TTTTGGCGTCGGAGC TTHA1917 1799172 - 1798606 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TTHA1918 1799385 - 1799182 - | hypothetical protein TERM 1521 1799469 - 1799457 - R 70 -6.2 -4.25104 | opp_overlap 1799463 GGTCCTCGAGGAAAA GCCC CCCCT GGGC CAAGGCACTCCCCAG TTHA1919 1800396 - 1799512 - | hypothetical protein TTHA1920 1801381 - 1800404 - | thioredoxin reductase TERM 1522 1801520 - 1801505 - H 100 -10.4 -5.0133 | opp_overlap 1801505 GAGCCGCGGAAAAAA CACCCC CGAA GGGGTG TTCCTGGTGACCCCA TTHA1921 1801846 - 1802442 + | hypothetical protein TTHA1922 1802567 - 1804084 + | hypothetical protein TTHA1923 1805269 - 1804091 - | sodium ABC transporter, permease protein NatB TTHA1924 1805985 - 1805269 - | sodium ABC transporter, ATP-binding protein NatA TERM 1523 1805835 - 1805800 - G 82 -14.7 -3.62096 | gap 1 CCGCACCACGTCAAA GCCCGCCACTAGCGCC CTCCC GGCGCTCG-GGCGGAC GAGGGTGGAGAGGAG TERM 1524 1806047 - 1806100 + G 95 -14.6 -4.3898 | opp_overlap 1806047, overlap 1806091 GGGTGAAGCCCAAAA GCTCCATAGAGG-CCCTGCCCGAGGC CCAG GCCCTGGTCCGGGACCTCT-TGGAGC TTTTCTACGAGTACT TERM 1525 1806100 - 1806047 - g 95 -14.6 -4.19238 | opp_overlap 1806047 1806091 GGGTGAAGCCCAAAA GCTCCATAGAGG-CCCTGCCCGAGGC CCAG GCCCTGGTCCGGGACCTCT-TGGAGC TTTTCTACGAGTACT TTHA1925 1806013 - 1806297 + | hypothetical protein TTHA1926 1806857 - 1806294 - | ATP:cob(I)alamin adenosyltransferase TERM 1526 1806877 - 1806914 + H 95 -18.5 -3.53012 | gap 1, opp_overlap 1806878 1806879, overlap 1806878 CCATTCTAGGGGTAA AG-CGAAGCCCCCTGGGG TTC TCCCAGGGGGCTTCGGCC TTTGGCGGGCCCGGG TERM 1527 1806912 - 1806878 - H 100 -21.5 -3.57462 | opp_overlap 1806877 1806878, overlap 1806879 CATTCTAGGGGTAAA GCGAAGCCCCCTGGG GTTCT CCCAGGGGGCTTCGG CCTTTGGCGGGCCCG TERM 1528 1806878 - 1806913 + H 100 -22 -2.71712 | gap 1, opp_overlap 1806878 1806879, overlap 1806877 CATTCTAGGGGTAAA G-CGAAGCCCCCTGGGG TTC TCCCAGGGGGCTTCGGC CTTTGGCGGGCCCGG TERM 1529 1806911 - 1806879 - H 100 -25 -2.74263 | opp_overlap 1806878 1806877, overlap 1806878 ATTCTAGGGGTAAAG CGAAGCCCCCTGGG GTTCT CCCAGGGGGCTTCG GCCTTTGGCGGGCCC TERM 1530 1807318 - 1807283 - H 78 -14 -3.60296 | gap 1, opp_overlap 1807317, overlap 1807284 GAGCTGGACCTCAAA GGCTCCGCCCTGG-GGA AGC CCCTCCAGGGCGAAGCG GCTCTCCCCACCCCG TERM 1531 1807317 - 1807284 - H 80 -17.5 -2.75963 | gap 1, overlap 1807283 AGCTGGACCTCAAAG GCTCCGCCCTGG-GGA AGC CCCTCCAGGGCGAAGC GGCTCTCCCCACCCC TERM 1532 1808041 - 1808026 - g 85 -10.4 -4.34402 | overlap 1808037 CGCCGGAGAGGAAAA CCCGCT AGGA AGCGGG GGGATGAAGAGCAAG TERM 1533 1808079 - 1808102 + G 75 -14.6 -3.28712 | CCGCCCGCATCGCCG GTAGGGTGGG GATC CCCACCCTGC TTCTCCCCGGGAAGC TTHA1927 1807406 - 1808518 + | gamma-glutamyl kinase TERM 1534 1809391 - 1809355 - g 77 -6.4 -4.58395 | gap 1 GCCATGCGGGAAAAA GGGGTGGAGCTC-AGGG CCTG CCCTAGGGCCCTTCCCC TCCTCAAAGAGGCGG TTHA1928 1808515 - 1809756 + | gamma-glutamyl phosphate reductase TTHA1929 1809816 - 1810613 + | hypothetical protein TERM 1535 1810629 - 1810595 - T 100 -28.6 -3.01712 | GCGGGTCCTGGAAGA GGCCCGCGAGGCGGGC TGA GCCCGCCTCGCGGGAC CGGGCGCAAGCCGGC TERM 1536 1810686 - 1810663 - T 100 -19.6 -4.08692 | GAACGGCGCGCAAAA CCCCCACCGC GGCC GCGGTGGGGG CGAAGGCGGGCAGGG TTHA1930 1811965 - 1810703 - | quinol-cytochrome c reductase, cytochrome b subunit TTHA1931 1812607 - 1811975 - | quinol-cytochrome c reductase, Rieske iron-sulfur subunit TTHA1932 1813098 - 1812616 - | c-type cytochrome TTHA1933 1813840 - 1813109 - | c-type cytochrome TERM 1537 1813606 - 1813652 + g 75 -12.8 -3.63515 | overlap 1813609 GCTCCACCTCCCCCG CCACCTCGCCCCCCTCGTCCAC GCC GAGGACGAGGACGTCGGGGTAG TTATTGACGGTGAAG TTHA1934 1814696 - 1813920 - | hypothetical protein TERM 1538 1814065 - 1814010 - G 80 -11.6 -4.07568 | gap 1, opp_overlap 1814057, overlap 1814011 1814022 GGCCGTGCCGGAAAA CCCCCGGAGGAAGGGGGCAAG-CCCCT CCC AGGGGACGCGCCCCGAGCCCACGGGGA GGTGGTCGTCCCGCC TTHA1935 1815741 - 1814698 - | NADPH quinone oxidoreductase TERM 1539 1814788 - 1814773 - G 75 -6 -4.56597 | overlap 1814774 CCGCTTCTCCAAAAA GGCGGC CTGG GCCTCC GGGAGCCGTTCCAAG TTHA1936 1816937 - 1815741 - | glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein TTHA1937 1816999 - 1818066 + | hypothetical protein TTHA1938 1819198 - 1818035 - | acyl-CoA dehydrogenase TERM 1540 1818536 - 1818511 - G 77 -11.1 -4.07568 | opp_overlap 1818504 CCCGCTCGCCCAAAA GGGCCTCCTCG GGCA CGAAGAGGTCC TCCAGGATTAGCTGC TTHA1939 1819771 - 1819304 - | MutT/nudix family protein prfA 1820835 - 1819771 - | peptide chain release factor 1 TERM 1541 1820859 - 1820909 + H 79 -11.1 -4.0162 | gap 1, overlap 1820858 1820860 CCAGGATAGCGCACC CGGC-CCTTGACCCCGGTTTTAGG TTAG CCTAAACTCGGGGGCATGGAGCCC TTTCTCCTCTACGCC TERM 1542 1820860 - 1820908 + H 74 -14.6 -3.00651 | gap 1, overlap 1820858 1820859 CAGGATAGCGCACCC GGC-CCTTGACCCCGGTTTTAGG TTAG CCTAAACTCGGGGGCATGGAGCC CTTTCTCCTCTACGC TTHA1941 1820901 - 1821695 + | ZIP zinc transporter family protein TTHA1942 1822297 - 1821713 - | putative cytochrome c oxidase assembly protein TTHA1943 1822704 - 1822294 - | hypothetical protein TTHA1944 1822765 - 1823109 + | hypothetical protein TTHA1945 1823109 - 1823552 + | hypothetical protein TTHA1946 1823527 - 1824123 + | nucleoside triphosphate pyrophosphohydrolase TTHA1947 1824153 - 1824620 + | MutT/nudix family protein TERM 1543 1824626 - 1824598 - f 72 -7.3 -4.27316 | opp_overlap 1824599 1824600 GGCGTGAAGGGAAAA GCCCCCCTCACGA GCT TCTCTAAGGGGGC TTCTGTAGTCCAATG TTHA1948 1825398 - 1826087 + | hypothetical protein TERM 1544 1827019 - 1827033 + G 74 -4.9 -4.56775 | opp_overlap 1827012 GGGAACAACCTGCGC GGCCG GGAGG TGGCC TTTTTCAGCCCCCGT TTHA1949 1826158 - 1827405 + | hypothetical protein TTHA1950 1828151 - 1827402 - | N-acetylglutamate kinase (ArgB-2) TTHA1951 1828635 - 1828144 - | hypothetical protein TERM 1545 1828221 - 1828210 - G 79 -7.2 -4.60487 | CAGGAGGTCCAAAAA GCCC AGGA GGGC GTGGTCCGGGTGGAG TERM 1546 1828830 - 1828801 - g 81 -17.9 -3.01712 | GGGGCGTGGGCAAGA CCACCACGGCGAG GCTC CTCGCCATGGCGG TGGGGTGCCAGGGGG TERM 1547 1829443 - 1829419 - g 77 -11.3 -4.11216 | overlap 1829420 TCGCGAGGGGGAAAA CGGCGGAGGCC CTG GGCCTCGCCCG GCGCCTCTACGGGGA TERM 1548 1830030 - 1830010 - g 100 -4.5 -6.24157 | overlap 1830012 AGGGAGAAAAAAAAA GCCTGAGCC CAA GGCCCCGCC CGGCCCCACCTCCTG TTHA1952 1828653 - 1830242 + | DNA polymerase III holoenzyme tau subunit TTHA1953 1830250 - 1830531 + | hypothetical protein TTHA1954 1830532 - 1830999 + | hypothetical protein TERM 1549 1832153 - 1832177 + G 77 -4.1 -4.65895 | CCCGAGGCTCGTCTT GGCCTCGGGGG ACA TCCTGGACGCC TTTTTGGATGCCCAG TTHA1955 1831050 - 1832900 + | 2-oxoacid--ferredoxin oxidoreductase, alpha chain TERM 1550 1833343 - 1833332 - g 70 -2.2 -4.46656 | GGGAGAAGACCAAAA GCCT CCCC AAGC CCAACCCCCAAAGCC TTHA1956 1832902 - 1833816 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TTHA1957 1834280 - 1833813 - | hypothetical protein TERM 1551 1833919 - 1833867 - Gf 90 -19 -3.14211 | gap 1 AGCCGGGTCCAGGAA GCGCCC-GGGGGCGAAGGCCCGGGC CCAG GCGGGGGCCTCCTCCCCCAGGGCCC AGGCCGCCAGGGCCT TERM 1552 1834470 - 1834452 - gH 73 -13.8 -3.18681 | GCTGAACGCCATCAA GGCCGCCC TCG AGGCGGCC CTGGAGGCGCGGGAA pheS 1834279 - 1835331 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1553 1836240 - 1836202 - g 73 -9.5 -3.90922 | gap 1 ACGGGGTGGAAAGAA CCCTCCACCCCGAGGACC TGGT GATCGCCGGG-TGGCGGG GGGAGGAGAGCTTCC TTHA1959 1835328 - 1837685 + | phenylalanyl-tRNA synthetase beta chain TERM 1554 1837732 - 1837744 + G 71 -9.1 -4.14392 | opp_overlap 1837732 1837731 GGGCCCCGGCAAAAG GCCCT CAG AGGGC TTTTCCGGATTAGCC TTHA1960 1837695 - 1837757 + | hypothetical protein TTHA1961 1837799 - 1838263 + | hypothetical protein pfkA 1839208 - 1838240 - | 6-phosphofructokinase TTHA1963 1839999 - 1839205 - | tetrapyrrole methylase family protein TTHA1964 1840495 - 1840001 - | hypothetical protein TTHA1965 1841086 - 1840559 - | inorganic pyrophosphatase TTHA1966 1841119 - 1841745 + | hypothetical protein TTHA1967 1841799 - 1842026 + | competence protein ComEA-related protein TERM 1555 1843462 - 1843502 + G 95 -15.3 -4.25104 | opp_overlap 1843450 1843451 GAAGGGGGAGGCGGT GGTCCGGGCCCTCCGCGCC CTC GGGGTGGAGGCCCTGGAGC TTTTGGTGGCCACCC TERM 1556 1843996 - 1844036 + G 79 -16.7 -3.05963 | TGAGCGCCACGGCGC GGAGGTGCGCCGCACCGAC CAG GACGGGGCGGTGCGCGTCC TCTTCGGCTACGCCT TTHA1968 1842023 - 1844056 + | competence protein ComEC TTHA1969 1844853 - 1844044 - | ParB family chromosome partitioning protein TTHA1970 1845586 - 1844837 - | ParA family chromosome partitioning ATPase TTHA1971 1846329 - 1845580 - | glucose inhibited division protein B TERM 1557 1845882 - 1845845 - G 73 -15.6 -2.9294 | GAGAGGACGCAGAGA GGGGCC-ACGGCCCGGGC CACC GCCCGGG-CGTAGGCCTC CCGGTGGCCCGCCTC TTHA1972 1848122 - 1846329 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1558 1846399 - 1846411 + g 71 -9.1 -4.08767 | overlap 1846410 CCGGGGATCCGGGCC GCCTC GGC GAGGC TTTTGGGCCGGTGGC TTHA1973 1848185 - 1849495 + | chromosomal replication initiator protein DnaA SEQUENCE gi|55978183|ref|NC_006462.1| Thermus thermophilus HB8 plasmid pTT27, complete sequence (length 256992) TTHB001 302 - 3 - | hypothetical protein TTHB002 814 - 452 - | hypothetical protein TTHB003 1033 - 1308 + | hypothetical protein TTHB004 1823 - 1305 - | transposase TTHB005 2338 - 1877 - | transposase TTHB006 2671 - 2363 - | hypothetical protein TERM 1 2650 - 2660 + g 78 -2.4 -4.79223 | overlap 2649 TCTCCTCCAAGCTTT GCAC CTT GCGC TTTTTCCTCATCTAC TTHB007 2944 - 2672 - | hypothetical protein TTHB008 3328 - 3558 + | hypothetical protein TERM 2 3721 - 3731 + G 76 -8.2 -4.18018 | opp_overlap 3720, overlap 3702 TCCTCGCCCAAAAGG GGCG GAT CGCC TTTTCCCTGGAGCCC TTHB009 3555 - 3959 + | hypothetical protein TTHB010 4304 - 4080 - | transposase-related protein TTHB011 4625 - 4341 - | transposase TTHB012 5697 - 5044 - | phosphoglycerate mutase family protein TTHB013 6044 - 5694 - | hypothetical protein TTHB014 7014 - 6037 - | phosphotransferase TTHB015 8171 - 7011 - | putative acyl-CoA dehydrogenase TERM 3 7334 - 7344 + g 77 -6.8 -4.56597 | opp_overlap 7325 ACTGAACGCCCTGGT GCTC GGC GAGC TTTTTGCCGAAGGAC TTHB016 8945 - 8184 - | gluconate 5-dehydrogenase TERM 4 8301 - 8261 - G 71 -15.4 -3.13403 | gap 2, overlap 8259 GGCTCGCCAGGAAGA GGACCGCCCCGCCGAGCTCC CCC GGGGCCC--CGGGGCGGCCC AGGGGCAGGGTGGCC TTHB017 9889 - 8945 - | medium-chain acyl-CoA ligase-related protein TERM 5 9712 - 9744 + g 73 -10.4 -3.73775 | CCACGCCCACCCCGA GGGCCTTGAGGCCC CCCAT GAGCCTCCTGGCCC TTTGGTAGACCTCGG TTHB018 10278 - 9925 - | hypothetical protein TTHB019 10730 - 10275 - | MaoC-related acyl dehydratase TTHB020 11505 - 10714 - | 3-oxoacyl-[acyl carrier protein] reductase TERM 6 10871 - 10854 - G 70 -4.7 -4.33274 | overlap 10855 CCGAGAGGAGGAAAA GGGCGGC CTGG GCCACCT CCTCGGGCCTTCCCG TTHB021 12035 - 11505 - | hypothetical protein TTHB022 13184 - 12048 - | putative acyl-CoA dehydrogenase TTHB023 13746 - 13171 - | TetR family transcriptional regulator TERM 7 13382 - 13400 + g 74 -2.3 -4.61527 | overlap 13385 AGGTTTTCCTCGTGC CGGTCGC GGAGG GCGATGG TTTTTAGGCGGTTTT TTHB025 15504 - 14194 - | hypothetical protein TERM 8 15488 - 15462 - GH 70 -4.3 -4.40572 | overlap 15463 ATAAGGCGGATAAAA TGGGCCCCC GGTGACTAG GGAGGCCCG ATGAAGAGGATACCA TTHB024 15489 - 16319 + | hypothetical protein TTHB026 16328 - 17122 + | hypothetical protein TTHB027 17341 - 17144 - | hypothetical protein TERM 9 17766 - 17744 - R 81 -12.1 -3.83347 | ATAGCGGAAAGACAA TGCCATCTC TCAGG GAGATGGCA GAGGGGGAAGAGCCC TTHB028 17953 - 17753 - | hypothetical protein TTHB029 18731 - 19525 + | hypothetical protein TERM 10 20190 - 20213 + GF 70 -9.4 -3.75153 | overlap 20192 AACCGGGCCTTCTGG GTGGTGGCCC TCGT GGGCCTCCTC TTTGAGTTCGGGCGC TTHB030 19539 - 20519 + | sugar transporter TTHB031 20405 - 20791 + | sugar transporter TTHB032 20794 - 22518 + | putative beta-galactosidase TERM 11 23207 - 23255 + G 75 -12.9 -3.61398 | opp_overlap 23207 GGCCTTCTACGAGAA CCCCGCCGAGGGCTTCGCCGACC TCC GGGGGGAGGAGGCCTGGGTGGGG TTCTTAGGGGGGGCC TERM 12 24830 - 24876 + G 72 -15.6 -2.71712 | overlap 24830 24839 CCTCAGGGCCCACGT GGAGGGGGAGGCCCACGCCGCC GAG GAGGGCGGGGTCCTCCTCCCCC CTTTCCGCGAGGCCC TERM 13 24830 - 24877 + G 72 -13.2 -3.53091 | gap 1, overlap 24830 24839 CCTCAGGGCCCACGT GGAGGG-GGAGGCCCACGCCGCC GAG GAGGGCGGGGTCCTCCTCCCCCC TTTCCGCGAGGCCCT TTHB033 22581 - 24911 + | alpha-glucosidase TERM 14 25035 - 25082 + G 71 -8.2 -4.06055 | gap 1, overlap 25038 25042 25043 TAGAGGCGGAGGTGG GCTGGTACCGCCT-CGCCCTGCC CGA GGCGGGGCCCAGGCGCTTCCTCC TTTCCTTTGGGGACT TERM 15 25342 - 25394 + G 81 -18.3 -3.01924 | overlap 25390 25392 GGGGCTATGGGGCGG GGTGGAGGTCTGGGCCCGGGAGG AGGTGGC CCTCCTGGGCCTCGCCCACCGCC TCTTCCCCCGCGCTG TTHB034 24908 - 26644 + | putative beta-mannosidase TERM 16 26696 - 26754 + F 79 -7.1 -4.59773 | gap 1 TCCGCCTCGAGGGCC CCGCCAC-CCTCCTCCTCCACGAGGAGG AGAT CGCCCTGGACGCGGGGGAGGTGCGGCGG TTTTTCAGCCTGGGG TTHB035 26746 - 26955 + | hypothetical protein TERM 17 27619 - 27633 + G 81 -2.7 -4.98436 | overlap 27620 GCGCCTTTTGGATCT ACGCC CTGGC GGCGC TTTTTCTCCTCTTCG TTHB036 26955 - 28217 + | sugar transporter TERM 18 28312 - 28294 - T 78 -13.8 -3.61398 | GCGCTGCGGCAACAA GGGGCGCC GGA AGCGCCCC CAGGGGCCCTACCCC TTHB037 31190 - 28563 - | hypothetical protein TERM 19 29446 - 29408 - G 76 -16.7 -2.78384 | gap 1, opp_overlap 29404 CGGCGTGCCAGTAGA GCCTC-TCCTCCCGCGCC TCGG GGCGCGGGGGGAGGAGGG CGGGGTCTTCCCGGA TERM 20 30252 - 30200 - G 100 -22 -4.11216 | gap 2 TCCCCACCTGCAAAA GGGCCTCCCCCAGGCGGAGCCGGGCC CGG GGGCCG-CCCCGCC-GCAGGAGGCCC TCCCAGGCCGCAAGC TTHB038 31325 - 31543 + | hypothetical protein TERM 21 31880 - 31859 - g 74 -2.9 -4.72272 | opp_overlap 31859, overlap 31861 GTGGGGGATGAAAAA GCTCCTTGT GGCG ACATGGACC CTTCTGGCCTGGGCC TERM 22 32590 - 32616 + G 84 -13.6 -3.90744 | CCCCGCCCGGCCCCG GGGGAGGGGAAG GAT CTCCCCCACCCC TTGTTTCCCCCACCC TTHB039 31851 - 33125 + | hypothetical protein TTHB040 33125 - 33574 + | hypothetical protein TERM 23 34080 - 34135 + G 79 -18 -2.74523 | overlap 34081 CTTCCGGCGGATCTA CGGGGCCCTGGCCCTGGCGGGGGCGG GGCT CCTCCTCCCCGAGGGCCTGGGGACCG TCCTCTTCGCCCTGG TTHB041 33583 - 34278 + | hypothetical protein TERM 24 35339 - 35378 + G 90 -6.8 -5.13741 | overlap 35365 GGCGGCCCAGGGGGG CCTCCGGCGGCAGGCCAC GGTG GAGGCCCGGGCCCGGGGG TTTTTCTTGCCTTCC TTHB042 34257 - 35861 + | hypothetical protein TTHB043 37517 - 36195 - | cobyrinic acid a,c-diamide synthase TTHB044 38080 - 37517 - | cob(I)alamin adenosyltransferase TERM 25 38038 - 38020 - G 70 -4.5 -4.34402 | opp_overlap 38021 CGGTGTAGACCAAAA GGAGACC TCGTC GCTCTCC TTGGGGCTTGGCGTA TERM 26 38110 - 38088 - R 71 -3.3 -4.65895 | overlap 38089 TCCTCCACGGAAAAA GCTTACCCC GCAAA GGGACAGGC CCTAGCGGAAGAAGA TTHB045 38945 - 38112 - | hypothetical protein TERM 27 39004 - 38960 - R 70 -11.3 -3.60296 | gap 1, overlap 38981 38984 38997 TAGCCCTATGGTAAA CCAGGCCCGGCACGGG-AGG AAGGAG CCGGCCCAAGCAGGGCCTGG GCCAGGAGGAGGACC TTHB046 39672 - 38950 - | cobalamin (5'-phosphate) synthase TTHB047 41481 - 39673 - | hypothetical protein TERM 28 41078 - 41068 - G 77 -6.8 -4.56597 | opp_overlap 41067, overlap 41069 41070 GCGTTTGCGGAAAAA CCCT TCC AGGG AGGGGATGTCCTCCT TTHB048 42511 - 41504 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TTHB049 42538 - 43071 + | alpha-ribazole-5'-phosphate phosphatase TTHB050 43336 - 43998 + | high-affinity nickel permease TERM 29 44050 - 44030 - g 73 -11.1 -3.78934 | overlap 44035 GCCCCGGGACAAGAA GGGAAGCCG CAT CGGCTTCAC CACGGGGGCAAACGC cbiD 43995 - 45095 + | cobalt-precorrin-6A synthase TTHB052 45130 - 45786 + | cobalamin biosynthesis precorrin-8X isomerase TERM 30 45936 - 45952 + G 74 -9.3 -4.11216 | opp_overlap 45924 GAAGGTGCCCGTCCA GGGCCCC CTG GAGGCCC TTTTGGACCTGGCGG TTHB053 45787 - 46998 + | precorrin-6Y C5,15-methyltransferase [decarboxylating] TERM 31 47525 - 47552 + G 74 -4 -4.59773 | opp_overlap 47507, overlap 47513 CGAGGCCCTGGAAAG GGCCTTTCCC GACCGGGA GGGGTGGGCC TTTTTGCGCCTGGGG TTHB054 46995 - 47666 + | precorrin-2 methylase TTHB055 47663 - 48406 + | precorrin-4 C11-methyltransferase TERM 32 49039 - 48994 - g 71 -6.8 -4.26903 | gap 1, overlap 49016 49028 49030 GGCAGCTTAGGAAAA GC-GCCGAGATCCTCCTGGAA TACCG CCCCAAGGAGACCCCGGCCGC CTTGGTGAAGAGCGC TTHB056 48411 - 49298 + | precorrin-3 C17-methyltransferase TTHB057 49291 - 50370 + | cobalamin biosynthesis protein CbiG TERM 33 50826 - 50812 - g 77 -7 -4.53163 | TCATAGAGGAGAAAA CCGGGG TGC CCACGG TACCCGCCTACGCCG TERM 34 50869 - 50904 + G 74 -7.5 -4.30576 | overlap 50851 50890 50891 50891 CCACGCCCAGGGAGG CCCTTCTGCGCCTCG CCGCCT TGAGGCCGAGGAGGG TTTTCCTCCTCCCCC TTHB058 50367 - 51470 + | cobalamin biosynthesis protein CbiX TTHB059 51471 - 51833 + | hypothetical protein TTHB060 51830 - 52537 + | S-adenosyl-L-methionine uroporphyrinogen methyltransferase TERM 35 52750 - 52767 + GF 89 -9.8 -4.56597 | opp_overlap 52750 TCCACCAAGAGGCAA GGGCCC GGGAGA GGGCCC TTTTTCAGGGAAAAG TERM 36 52809 - 52782 - gf 71 -6.2 -4.18018 | gap 1 CTTTTTCAGGGAAAA GCC-CAGCGGGTC TAC GACCGTCTGCGGC TTGAAGGGCTCCTCG TTHB061 52503 - 53150 + | cobalamin biosynthesis nitroreductase BluB TTHB062 53147 - 53995 + | cobalamin biosynthesis protein CbiB TERM 37 54061 - 54079 + GF 89 -5.2 -5.08824 | overlap 54020 54062 CCTGGAGCAGGCCAG GCTTTCCC TGC GGGAAGGG TTTTTTGAGTGGGCG TTHB063 54005 - 54436 + | hypothetical protein TTHB064 54363 - 54692 + | hypothetical protein TTHB065 54729 - 55736 + | cobalamin biosynthesis aminotransferase TERM 38 56165 - 56143 - g 75 -11.2 -3.90112 | TTCCCTGGAAGGAAA GGAGGCCCCA CCT CGAGGCCCCC GTCCGCGAGGCCCTG TERM 39 57308 - 57295 - g 74 -9.5 -4.07568 | overlap 57304 TGGGCGGGGCGAAAA GCGGC AAGA GCCGC TTCGCCCAGAGGCTC TERM 40 57810 - 57781 - g 100 -18.6 -4.30014 | CCCAGGAAGCCAAAA GGCCCGGCTCCC ACGGAG GGGAACCGGGCC CCGGCCGATCCCGCG TTHB066 55950 - 57839 + | cobyric acid synthase/cobinamide kinase TTHB067 59341 - 57836 - | alkaline phosphatase TTHB068 61573 - 59516 - | hypothetical protein TERM 41 60516 - 60543 + g 73 -10.4 -3.72695 | opp_overlap 60470 60497 60532 GGCCATCCTTGGGCC CCGTCCAGGCGC AAGA GGGCCAGGGCGG TTTCCTGGGCCCGGT TTHB069 61751 - 62152 + | hypothetical protein TTHB070 62962 - 62228 - | survival protein SurE TTHB071 63736 - 62972 - | hypothetical protein TTHB072 64037 - 64660 + | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase TTHB073 65414 - 64638 - | transcriptional regulator TTHB074 65492 - 66451 + | putative C4-dicarboxylate transporter, periplasmic C4-dicarboxylate-binding protein TERM 42 66458 - 66480 + F 100 -22 -4.57073 | opp_overlap 66451 66448 AGGAAGTAGCCCTTC GGCCCCCCGG CCT CCGGGGGGCC TTTTTGCCGCACATG TERM 43 66744 - 66792 + G 70 -9.5 -3.7732 | gap 2, opp_overlap 66711, overlap 66746 CCCGGGGGCGAGGCG GTGGGCCAGGGTGGGGGTCTGGC TTCTC GTC-G-CCCTCTTCCTGGCCCTC TTCTTCGTCTACAGC TTHB075 66493 - 66954 + | putative C4-dicarboxylate transporter, small permease protein TERM 44 67587 - 67601 + G 72 -11.4 -3.64259 | overlap 67544 67574 67593 AAGGAGGTTGGGGCG GCCCTC CGG GAGGGC TTCTTCGCCGTGCTT TERM 45 68063 - 68076 + G 70 -9.5 -3.727 | CGTGGGGCTCCTCAC GCCCC CCGT GGGGC TTTCCATGTACTCGG TERM 46 68136 - 68160 + G 72 -5.7 -4.37527 | overlap 68135 68135 GAGTACGTGCGGGAG GGGTGGC CCTTGCTGGTC GCCACCC TTTTGGTCCTTCTCC TTHB076 66957 - 68240 + | putative C4-dicarboxylate transporter, large permease protein TERM 47 68780 - 68760 - g 70 -14.7 -2.89564 | CCGGGACCGTAGACA CCCCCTCCC TGC GGGAGAGGG CCGGAGGGGAGGAGG TTHB077 68237 - 68941 + | short chain dehydrogenase/reductase family oxidoreductase TTHB078 68938 - 69972 + | malate/L-lactate dehydrogenase family protein TTHB079 69965 - 70894 + | 2-keto-3-deoxy-gluconate kinase TTHB080 70904 - 71623 + | 2-deoxy-D-gluconate 3-dehydrogenase TTHB081 71841 - 72833 + | LacI family transcription regulator TTHB082 72909 - 74213 + | sugar ABC transporter, periplasmic sugar-binding protein TERM 48 74220 - 74239 + F 100 -16.4 -5.07486 | CTGAGGTGAGGCGTA GGGGGGCC TCGA GGCCCCCC TTTTTCTTCCCCATG TTHB083 74252 - 74779 + | sugar ABC transporter, permease protein TTHB084 75983 - 74763 - | transposase TTHB085 76019 - 76438 + | sugar ABC transporter, permease protein TERM 49 76726 - 76748 + G 80 -12 -4.07568 | GTACGCCCTTGCCCG GTTCCGCTTC CCC GGAGCGGAGC TTTTCGGGGGAAGCG TTHB086 76442 - 77299 + | sugar ABC transporter, permease protein TERM 50 78389 - 78337 - g 80 -9.7 -4.1899 | opp_overlap 78336 TTACGTCACGGAAAA CGGGGCCGCCTACCCCGATCTCT GGACGGG AGAGGCCGTGGTGGAGGACCCCG AGCGGGTGGCCTACC TTHB087 77321 - 78616 + | beta-glucosidase TTHB088 79464 - 78640 - | Zn-dependent hydrolase TTHB089 79721 - 80386 + | hypothetical protein TERM 51 80393 - 80431 + G 75 -13.1 -3.70853 | gap 1, overlap 80397 AACCGCTGAGGCCCC TAAGCCCCCCTTCCCGGG GCCT CCCGGGGAGG-GGGCTCC TTCTTGGCTCCTTCC TERM 52 80397 - 80428 + G 84 -19.4 -2.95139 | overlap 80393 GCTGAGGCCCCTAAG CCCCCCTTCCCGGG GCCT CCCGGGGAGGGGGC TCCTTCTTGGCTCCT TERM 53 80692 - 80714 + G 89 -11.2 -4.59773 | overlap 80692 CCCTCCTCCGGGAGT GGCTCCTCCC CAC GGGAGGGCCC TTTTTGGACGTGGGC TERM 54 80771 - 80795 + G 73 -14.9 -3.15544 | CCTGGGGGAGGGGAT GGTGGGGGTGG ACC CCTCCCCCGCC TTCCTCAAGGTGGCC TTHB090 80373 - 81125 + | hypothetical protein TERM 55 81621 - 81673 + GT 75 -7 -4.36914 | gap 3, opp_overlap 81613, overlap 81625 GGGAGAAGCTCTCCG GGCTCGTCCTCCTGGACGGGGCCCC CGGGGT GGTGCCCCTTGC-GGAGGA-G-GCC TTTTATGAGGGGGCG TERM 56 81849 - 81822 - gT 89 -14.8 -4.07568 | TCCTCGCGGCGAAAA GGCCCGAGGAGG ACCT CCCCTTCGGGCC CTACCGGGCCACCCG TERM 57 82051 - 82063 + GT 75 -4.7 -4.58283 | overlap 82045 CACGGGGGAGGCCAC GGACC CGA GGGCC TTTTTAAGGGCCTTC TTHB092 83720 - 82317 - | phytoene dehydrogenase TTHB091 81122 - 82402 + | hypothetical protein TERM 58 82857 - 82833 - Gf 72 -13.5 -3.21099 | opp_overlap 82833 CCCGTGGACCACGAA GGCCCCCCAGG CGT CCTCGGGGACC TTTAGGGGAAGGCCG TERM 59 82833 - 82857 + gF 70 -11.3 -3.53012 | opp_overlap 82833 CCCGTGGACCACGAA GGCCCCCCAGG CGT CCTCGGGGACC TTTAGGGGAAGGCCG TTHB093 83768 - 85261 + | putative oxidoreductase TERM 60 85837 - 85869 + G 93 -20.5 -3.53012 | TGGCCACGGGGCTTT GGGCCCCCCTCGGGG GCC CCCCCAAGGGGGCCC TTTCCCCGGAGGAGG TTHB094 85323 - 85946 + | putative short-chain oxidoreductase TTHB095 85948 - 86478 + | hypothetical protein TTHB096 86475 - 86990 + | hypothetical protein TTHB097 87210 - 87001 - | hypothetical protein TTHB098 88246 - 87383 - | NADH-ubiquinone oxidoreductase 39 kDa subunit related protein TERM 61 88205 - 88189 - G 74 -10.1 -4.07568 | GGCCCCGCGCCAAAA GGAGGCG CAC CACCTCC TGGCCCACGAAGCCC TTHB099 88834 - 88247 - | Crp family transcriptional regulator TTHB100 89688 - 88831 - | MerR family transcriptional regulator TERM 62 88885 - 88869 - G 79 -13.7 -3.6682 | opp_overlap 88857 CCCTAGGGAGCCAAA GGGCCTC GGC GAGGCCC TTCAGGTCCTCCATG TERM 63 89439 - 89385 - G 81 -18.5 -3.01712 | gap 2 GCCCCCGGCGGAAGA GGGCCTCGGCCCCGGCGAGGTCCCCCC GGA GGAGGG-CCTCGAGGAGGCCG-GTCCC CAGGTCCTCGGGGCG TTHB101 89780 - 90649 + | phytoene synthase TERM 64 90844 - 90807 - g 77 -11.1 -4.07568 | gap 1, opp_overlap 90812 90813 CTGGTTCCTGGAAAA CGTC-CGGGCCCTGCGGG AGG CCTACCGGGCCCGGGGCG GGGCCCTTTGGGTCC TTHB102 90649 - 91911 + | DNA photolyase TTHB103 92097 - 93266 + | cytochrome P450 (Cyp175a1) TTHB104 93263 - 93961 + | phytoene synthase-related protein TERM 65 94020 - 93997 - g 71 -8.8 -4.07647 | gap 1 AGACCCTAAAGGAAA GGCCCACGGGC AAG GCCC-TGCGCC TCCTGGTGGAGGCCC TTHB105 93966 - 94643 + | putative acyltransferase TTHB106 94640 - 95662 + | glycosyltransferase TTHB107 95716 - 95976 + | hypothetical protein TTHB108 95997 - 96389 + | plasmid stability protein TERM 66 96587 - 96603 + G 73 -15.1 -3.14132 | opp_overlap 96579 96580, overlap 96573 TGGAGAAGCTCCCGG GGCCCGG AGG CCGGGCC TTCGTCCACCGGGCG TERM 67 98035 - 98022 - g 74 -9.5 -4.07568 | opp_overlap 98022 CCTGGGCCTGGAAAA GGCCC CTAA GGGCC TTCTGGAGGCGCGGG TTHB109 96487 - 98055 + | phytoene dehydrogenase TTHB110 98052 - 99050 + | isopentenyl pyrophosphate isomerase TTHB111 99060 - 99452 + | hypothetical protein TTHB112 100430 - 99483 - | hypothetical protein TERM 68 99648 - 99672 + g 79 -13.5 -3.65046 | opp_overlap 99645, overlap 99642 GAGATCCAGGAAGTG GGCCTTCTCCC TTG GGGCGAGGGCC TTCTTAAAGTGGCCG TERM 69 99788 - 99753 - G 89 -10.4 -4.56597 | gap 1, overlap 99786 CGTGGCCCGCAAAAA CCCCTCCTCGTAGGCCC CAT GGACCT-CGGGAAAGGG CCTCCCCTTAGCCCC TTHB113 101215 - 100427 - | hypothetical protein TTHB114 102344 - 101295 - | galactose-1-phosphate uridylyltransferase TTHB115 103758 - 102328 - | alpha-galactosidase TTHB116 105655 - 104030 - | acyl-CoA dehydrogenase, short-chain specific ( AidB protein) TERM 70 104082 - 104057 - G 70 -12.5 -3.35679 | gap 1 CTCGGGCAGGTACAA CGCCCGCGCGCC CAG GGC-CTCGGGCG GGTAGTCCTCCCCGA TERM 71 105813 - 105844 + G 80 -6.5 -4.62783 | gap 1, opp_overlap 105812, overlap 105812 GGGCCTTCAACGGAC GGCGCAC-GCTCCT AAGCC AGGAGCAGGCCGCC TTTTTGCGCTCCCTG TERM 72 105985 - 105995 + G 71 -8.2 -4.04206 | overlap 105984 CCGCGCCTTGGACCT CCCC CCG GGGG TTTCTCTAAGCCTAA TTHB117 105746 - 106165 + | putative type IV pilin TTHB118 106162 - 106641 + | secretion system protein TTHB119 106653 - 107582 + | prepilin-like protein TTHB120 107595 - 109466 + | hypothetical protein TERM 73 109524 - 109478 - T 83 -15.8 -3.56594 | opp_overlap 109483, overlap 109468 109481 CTAAAGCTTCGCAAA GCAGTGCCCAGGGGCGAGGG AAGGACG CCCTCGCCCCTGGGCTTTAG AGCGCAGTAAGGCCT TERM 74 109521 - 109481 - T 95 -19.7 -2.90992 | opp_overlap 109483, overlap 109478 AAGCTTCGCAAAGCA GTGCCCAGGGGCGAGGG AAGGACG CCCTCGCCCCTGGGCTT TAGAGCGCAGTAAGG TERM 75 109483 - 109519 + T 100 -26.7 -3.53444 | opp_overlap 109481 109478 GCTTCGCAAAGCAGT GCCCAGGGGCGAGGG AAGGACG CCCTCGCCCCTGGGC TTTAGAGCGCAGTAA TTHB121 110275 - 109973 - | resolvase-related protein TERM 76 110482 - 110459 - R 89 -8.2 -5.00765 | gap 1, overlap 110451 AATGAATCAGAAAAA CCTGGGCAGTT GTC AACC-CCCAGG CAGGCCAGAAGCCTC TTHB122 110761 - 110549 - | hypothetical protein TERM 77 111087 - 111066 - R 100 -17.3 -4.86731 | GCTTCGGAAAGAAAA CCACCCCGG CTTC CCGGGGTGG TCATGGGACCTGAGA TTHB123 111400 - 111125 - | hypothetical protein TTHB124 112344 - 111457 - | ParB family chromosome partitioning protein TTHB125 113309 - 112341 - | ParA family chromosome partitioning ATPase TTHB126 115211 - 113820 - | hypothetical protein TERM 78 115270 - 115237 - R 85 -13.1 -4.09685 | gap 1, opp_overlap 115264, overlap 115238 TTTTACCCGGCAAAA GCCGGGGCGCCCCC GAACCGA GGGGGCGCC-CGGA AGGGGAGGGCTTAGT TERM 79 115269 - 115238 - R 79 -16.6 -3.05597 | gap 1, opp_overlap 115264, overlap 115237 TTTACCCGGCAAAAG CCGGGGCGCCCCC GAACCGA GGGGGCGCC-CGG AAGGGGAGGGCTTAG TTHB127 117866 - 115281 - | arsenite oxidase, large subunit TTHB128 118360 - 117878 - | arsenite oxidase, small subunit TTHB129 119658 - 118438 - | transposase TTHB130 119724 - 120062 + | putative transcriptional regulator TTHB131 120481 - 121032 + | hypothetical protein TTHB132 121042 - 121572 + | methionine sulfoxide reductase A TERM 80 121591 - 121610 + T 71 -9.2 -3.7941 | CTTCTTCCTCCAGGA CGGCCAGG AGGG CCTGGGCG TTGTTGTAGCGCGTC TTHB133 121924 - 121736 - | hypothetical protein TTHB134 122324 - 121929 - | hypothetical protein TERM 81 122448 - 122436 - R 79 -6.9 -4.67904 | overlap 122427 GACGAAGCCCAAAAA GGGCG TCA CACCC GCTTCACCGCCAGAC TTHB135 122887 - 122441 - | hypothetical protein TTHB136 123174 - 122884 - | CopG family transcriptional regulator TERM 82 123644 - 123689 + G 73 -6.7 -4.34402 | gap 1, opp_overlap 123678, overlap 123643 123643 TGGGGCGGGGCCTTG GCCCTTGCG-GCCCTTTTCCAC GGG GTGGACGAGAGCGCCCTGGGGC TTTTCCTCTGGGCCG TERM 83 123823 - 123811 - g 77 -6.2 -4.59773 | opp_overlap 123810 CCGCATCCTGAAAAA CCGC ATGAA GCGG GCTTTGGACATCGGG TERM 84 123955 - 123979 + G 78 -2.7 -4.8048 | opp_overlap 123970 GGGCCTGGTGGTGAC GGGGATGCTCT ACA AGATCCTGCCC TTTTTGGTCTGGACC TERM 85 124030 - 124082 + G 84 -11.2 -4.19238 | gap 2, opp_overlap 124024 124027 GGGCAAGGAGAAGGT GCCCCTCCTCAAGG-AGAT-GCTCCC CGA GGGGGCGGGCTACCTGGCGGGGGGGC TTTTGGCCTTCGGGG TTHB137 123434 - 124192 + | hypothetical protein TTHB138 124189 - 124500 + | hypothetical protein TERM 86 124887 - 124920 + GT 75 -15.3 -2.79023 | gap 1, overlap 124883 124889 CCACCGCTACGGCAC GAGCCCCACCGCG-GC CCA GCTCGTGGTGGGCCTC TACTTCCTGGGCTTC TERM 87 124955 - 125005 + GT 76 -3 -4.74103 | overlap 124957 TGGGCCAGCTCCTCT GGGGCCCCCTCATGGACGCCCT GGGGCGG AGGAAGGTCCTGAGGGGGGCGC TTTTTGGCTTCAGCC TERM 88 125562 - 125620 + GT 79 -13.3 -3.66018 | overlap 125614 GGCGAACCTCCTTGG GCCCCAGGTCGTGGCCCGCCTC--GGCCT CGGGA AGGCCCTGAGGCGGGCTGTGGC--GGGGC TTCTTGCCCTCCTCC TTHB140 127396 - 125927 - | hypothetical protein TTHB139 124777 - 126021 + | major facilitator superfamily permease TTHB141 128072 - 127398 - | putative glycerophosphoryl diester phosphodiesterase TERM 89 127740 - 127694 - G 75 -12.9 -3.64682 | gap 1, overlap 127695 127698 GATCAAAGCTGGAAA CCCACACCCCCTC-CCGCCCTC GGAG GAGGGCGGCGAGGCGGCGCGCC GCCTCCTCCCCGAGG TERM 90 127739 - 127695 - G 72 -16.4 -2.78327 | gap 1, overlap 127694 127698 ATCAAAGCTGGAAAC CCACACCCCCTC-CCGCCCTC GGAG GAGGGCGGCGAGGCGGCGCGC CGCCTCCTCCCCGAG TERM 91 127736 - 127698 - G 82 -18.9 -2.65547 | gap 1, overlap 127695 127694 AAAGCTGGAAACCCA CACCCCCTC-CCGCCCTC GGAG GAGGGCGGCGAGGCGGCG CGCCGCCTCCTCCCC TERM 92 128089 - 128114 + H 77 -12.6 -3.68827 | gap 1, overlap 128089 CGCGTTTCCTCCGGA G-GGGTCCGCC GCTTG GGCGGACCCGC TTTCCATCCTAAGTG TTHB142 128207 - 129694 + | glycerol kinase TERM 93 130095 - 130085 - g 71 -8.2 -4.07568 | opp_overlap 130086, overlap 130086 TCCTCGCCGGGAAAA GGCG CCT CGCC CCAAGCCGCTACCTT TERM 94 130894 - 130859 - g 85 -13.9 -4.07568 | gap 1 TTCCGCCCTCCAAAA GCCAC-GCCACGCCCC TCCTC GGGGCGGGGCCGAGGC CCCCCCTCCCCTTGC TERM 95 131070 - 131091 + G 81 -8.6 -4.56597 | opp_overlap 131055 GCCCCTGGACGTCCT GGCGCGGC GGATGG GCCTCGCC TTTTTGGACCAAGAG TTHB143 129694 - 131226 + | putative glycerol-3-phohsphate dehydrogenase TERM 96 132328 - 132301 - g 78 -2.6 -4.84359 | CTACGGGGAGAAAAA CCGCCTACAG GCCCTCCT CCAAAGGCGG CACGAAAGCATCCTG TTHB144 131246 - 132451 + | hypothetical protein TTHB145 132455 - 133402 + | hypothetical protein TTHB146 134919 - 133966 - | transposase TERM 97 136210 - 136236 + H 73 -10.8 -3.68827 | opp_overlap 136209 136208 136212, overlap 136212 AACCTCCTGAAAAGC TACGGGGAGCGG GTC CAGCTCTCCGTG TTTGAGTGCTACCTG TTHB147 136457 - 138874 + | hypothetical protein TTHB148 138875 - 139279 + | hypothetical protein TTHB149 139291 - 140016 + | hypothetical protein TERM 98 140775 - 140759 - gf 75 -9.4 -4.07568 | CCCGGCCCTTCAAAA GGCCCT ACCTA AGGGCC AAGGAGGGGAGCGTC TTHB150 140026 - 140901 + | hypothetical protein TTHB151 140859 - 142052 + | hypothetical protein TTHB152 142063 - 143457 + | hypothetical protein TTHB153 143986 - 143528 - | hypothetical protein TTHB154 145807 - 144854 - | transposase TERM 99 147330 - 147383 + G 70 -5 -4.34402 | gap 2, overlap 147324 147332 147380 ACTGGCGGCGGCCCG GCGCCCGGGTCTTCCTCGTGGAGGGC CACC GCGC-CCTCGAGGC-GCCCAGGGCCC TTTTCCTCTGGCCCC TERM 100 147528 - 147559 + G 76 -15.8 -3.21099 | overlap 147531 CCCCTGGGGCTCAGG CGGCCCGCCTTCCC GGCC GGGAGGGCGGGGTG TTCGTGGTCCACCGG TERM 101 147531 - 147556 + G 78 -18.3 -2.50016 | overlap 147528 CTGGGGCTCAGGCGG CCCGCCTTCCC GGCC GGGAGGGCGGG GTGTTCGTGGTCCAC TERM 102 148001 - 148021 + G 75 -12.5 -3.61398 | opp_overlap 147999 148000, overlap 148002 CCCGAGATGGAAAGC CGCCTCCGC TGG GCGGAGGCC TTCTTCCGGGGCAAG TERM 103 148002 - 148020 + G 72 -16 -2.76696 | opp_overlap 147999 148000, overlap 148001 CCGAGATGGAAAGCC GCCTCCGC TGG GCGGAGGC CTTCTTCCGGGGCAA TERM 104 148495 - 148465 - g 86 -9.7 -4.58283 | gap 1, opp_overlap 148465 148477 GAAGTTCTGGAAAAA GCGCTTCGGCCAGG CCTT CCCC-CCGAAGCGC CTTTCCAGGCTCAAG TERM 105 148629 - 148652 + G 70 -12.4 -3.38812 | opp_overlap 148618, overlap 148627 ATGAGGCCCTGGCCC CCCAGTCCAC CGAG GTGGACGGGG TCTTCTTCCACCGGG TTHB155 147020 - 148930 + | hypothetical protein TTHB156 149422 - 148901 - | hypothetical protein TERM 106 149479 - 149436 - R 75 -13.8 -3.26649 | ATAGCGCTAGAGGAA GGGGCAGACCCGAGGGGT GGTGCCGT ACCCCACCAGCCTGCCCC CTGAGGCCTGAATGA TTHB157 150146 - 149427 - | hypothetical protein TTHB158 151080 - 150115 - | hypothetical protein TTHB159 151483 - 151073 - | hypothetical protein TTHB160 151610 - 153364 + | hypothetical protein TERM 107 153944 - 153984 + G 85 -18.9 -3.04144 | overlap 153926 153976 AGGGAGGCGCCGCCT CGCCCTGGTGCTCTGGCCC GAG GGGCCGGAGCCCGAGGGGG TCTTCCCCCTGGGGG TTHB161 153354 - 154439 + | hypothetical protein TTHB162 154436 - 155623 + | hypothetical protein TERM 108 155875 - 155854 - g 76 -8.6 -4.2349 | GCCCGACACGGAAAA CGCCTCGG AGCACG CCGGGGCG GTGCAGGTGGGGGAC TTHB163 155639 - 156499 + | hypothetical protein TTHB164 156503 - 156847 + | hypothetical protein TERM 109 156986 - 157020 + G 87 -6.3 -5.02074 | gap 1, overlap 157002 TTCTCGTCCGGGAAG CGGCGGGGA-TCCCCG AGCC CGGGGAGTACCGGGCG TTTTTTAAGCGGTAC TERM 110 157484 - 157498 + G 79 -12.8 -3.85698 | TCCTCCTCGCCCTCT CCCCGG CCC CCGGGG TTTCTCCCGAGGAGG TERM 111 157657 - 157641 - g 80 -9.3 -4.19238 | opp_overlap 157651 GTCCCAAGGGGAAAA GCCCCTG GCG CCGGGGC CGAGCCCGGTCCTTC TTHB165 156850 - 157896 + | hypothetical protein TTHB166 158025 - 158171 + | hypothetical protein TTHB167 158494 - 158853 + | hypothetical protein TTHB168 158902 - 159336 + | hypothetical protein TTHB169 159345 - 159728 + | hypothetical protein TTHB170 159849 - 161180 + | hypothetical protein TERM 112 161188 - 161221 + T 72 -7.3 -4.28049 | opp_overlap 161193 161194, overlap 161194 TCCGCTAAGGATTAG GGAAAGGGGGGAGGG TATA CCCTCCCCCTTTGGG TTTTCCCCTTTTGCC TERM 113 161216 - 161193 - T 80 -13.8 -3.70037 | opp_overlap 161188 161194, overlap 161194 TAAGGATTAGGGAAA GGGGGGAGGG TATA CCCTCCCCCT TTGGGTTTTCCCCTT TERM 114 161215 - 161194 - T 82 -17.3 -2.8154 | opp_overlap 161194 161188, overlap 161193 AAGGATTAGGGAAAG GGGGGAGGG TATA CCCTCCCCC TTTGGGTTTTCCCCT TERM 115 161194 - 161215 + T 95 -17.3 -3.93061 | opp_overlap 161193 161194, overlap 161188 AAGGATTAGGGAAAG GGGGGAGGG TATA CCCTCCCCC TTTGGGTTTTCCCCT TTHB171 162256 - 161480 - | hypothetical protein TTHB172 165629 - 162279 - | reverse gyrase TERM 116 163198 - 163225 + g 79 -17 -3.09671 | TTTTGCTCCCGCTCC CCCTCCTCCAGG ACCT CCAGGAGGAGGG TCTTCGCCTTGACCT TERM 117 165098 - 165123 + g 84 -6.8 -4.82901 | gap 1, opp_overlap 165096 165097 CCACGAAGAGGAAGT CCACGGGCCGG GGGAG CCGGGC-GTGG TTTTTGTAGAGGAAG TERM 118 165513 - 165492 - G 75 -5.7 -4.56597 | overlap 165494 CTCCTGGGCGAAAAA CCGGGCCAG CGCC CCAGCCAGG GGGGGCTTCGCGGGG TTHB173 166674 - 166021 - | response regulator TTHB174 167372 - 166632 - | sensor histidine kinase-like protein TTHB175 169079 - 167973 - | ABC transporter, ATP-binding protein TERM 119 168802 - 168819 + g 79 -5.5 -4.62069 | AGATTGCGCCGCTCC GGGGG AAGGAACA CCCCC TTTTTCCCGTCAAAA TERM 120 168854 - 168837 - G 81 -2.6 -5.00616 | overlap 168839 TTTCCCGTCAAAAAA CACCTC TTTGCC GAGGAG GATCCTCCCCCCCGT TTHB176 170792 - 169095 - | putative iron ABC transporter, permease protein TERM 121 170754 - 170723 - G 75 -13.7 -3.44051 | gap 1 GGGCGAGGACCAGAA GCCCCACCGCCCCC GTGAG GAGGGCGA-GGGGC CAGGGAACCGAGGGG TTHB177 171878 - 170802 - | iron ABC transporter, periplasmic iron-binding protein TTHB178 173165 - 172275 - | hypothetical protein TERM 122 173304 - 173318 + G 76 -3.4 -4.61527 | overlap 173304 CCGAGCCGAGGAGGG CCCTGG CGC CGGGGG TTTTTCACAGGTTTT TTHB179 173200 - 173856 + | hypothetical protein TTHB180 173870 - 176536 + | hypothetical protein TERM 123 176575 - 176544 - f 100 -24.4 -3.58343 | TGCAGTAGGCCCAAA GCCCCGCCCCGGGG GCTT CCCCGGGGCGGGCC CCCTAGGGGGGAAGG TERM 124 176942 - 176926 - g 74 -5 -4.57569 | overlap 176927 176928 CTACCGCCTGAAAAA CGGGGG GAACG CCCCCT ACACCTTCGCCCTGA TERM 125 179164 - 179140 - g 77 -10.8 -4.09685 | gap 1, opp_overlap 179155 179158 CCTCACCCTGGAAAA GCGCCTCCTTC CCCT GAAGGAGG-GC TTCCGGGTGGTCCTC TTHB181 176642 - 179347 + | hypothetical protein TERM 126 180249 - 180231 - g 82 -9.5 -4.34402 | CCCCGTAGAGGAAAA GGACCGG GTCTT CCGGCCC CTCCTCCCCGAGGGA TERM 127 180284 - 180298 + G 71 -7 -4.25104 | overlap 180285 GCCTCCTCCGGGTGG AGGCCC GGG GGGCCG TTTTCGTCCAGGAAG TERM 128 181585 - 181536 - g 73 -14.2 -3.28712 | gap 1, opp_overlap 181546, overlap 181512 181514 181515 TCTCCTCCTGGAGAA GGAGGCGGACCCCCCGCGCCTCC TGGAG GGAGGC-CAAGGGGTCTTCCGCC TCCGGGTGAGGAACC TTHB182 179344 - 184731 + | hypothetical protein TERM 129 185382 - 185360 - g 87 -3.2 -5.0538 | CGCCACCTTAAAAAA CCTGGTGGTC TAC GACGGCCTGG CGACGGTGAGTGACG TTHB183 184728 - 187718 + | hypothetical protein TTHB184 188458 - 187763 - | hypothetical protein TTHB185 189447 - 188503 - | hypothetical protein TERM 130 189916 - 189926 + H 70 -2.4 -4.58395 | ACGTGGAGGTCTACG CCGG GAA CCGA TTTTTCACCGGTCCA TTHB186 191138 - 192127 + | putative transcriptional regulator TTHB187 192124 - 194886 + | hypothetical protein TERM 131 196077 - 196064 - g 74 -2.3 -4.66264 | overlap 196074 GAAAACCTGGAAAAA GCCTT GAAG ATGGC CGAGGAGCTGGGGCA TTHB188 194936 - 196444 + | hypothetical protein TTHB189 196441 - 196950 + | hypothetical protein TTHB190 196947 - 198062 + | hypothetical protein TERM 132 198385 - 198371 - g 81 -2.1 -4.96848 | gap 1 GCCGCTATACAAAAA CT-CCC ATAC GGGTAG ACGAGCGCAATGCGA TTHB191 198064 - 198810 + | hypothetical protein TERM 133 199389 - 199356 - g 100 -20.9 -3.57144 | opp_overlap 199377 199377 199379 TGGTGGACCCCGAAA GGGCCCTCGCCACGC TAAG GCGGGGCGTGGGCCC CGGGAAGGCCCTGGG TTHB192 198797 - 199432 + | hypothetical protein TTHB193 199442 - 200419 + | hypothetical protein TTHB194 200376 - 200750 + | hypothetical protein TTHB195 202834 - 202082 - | hypothetical protein TTHB196 203707 - 202862 - | putative protein required for formate dehydrogenase activity TTHB197 205989 - 203704 - | formate dehydrogenase TERM 134 204051 - 204073 + g 71 -9 -4.07568 | GGCGGGTGACCACGC GGAAGGCCCC CTC GGGGACCTCC TTTTGGGGCAGGGGC TTHB198 206364 - 207572 + | hypothetical protein TERM 135 208821 - 208845 + G 76 -9.1 -4.31433 | overlap 208807 208835 CCTGTCCTCTCCCGA GGCCGCCCTGC GGC GGGAGGCGGCC TTTCTTCTGGCCCTG TTHB199 207574 - 210417 + | hypothetical protein TERM 136 210985 - 210973 - T 85 -10.5 -4.21812 | opp_overlap 210969 210979 CCGGAGGGAAAAGAA CCCCC TTT GGGGG CCCCTATCTTCGCGA TTHB200 211812 - 211123 - | transposase-like protein TTHB201 212344 - 211784 - | transposase-like protein TTHB202 212731 - 212351 - | hypothetical protein TTHB203 213024 - 212788 - | hypothetical protein TTHB204 213466 - 213224 - | hypothetical protein TTHB205 213872 - 213525 - | hypothetical protein TTHB206 214431 - 213742 - | hypothetical protein TERM 137 214342 - 214321 - GH 72 -11.5 -3.55071 | GTAGAGGGGGGGAAA GCGCCGCCA GGTG TGCCGGCGC CTCGTCCGAAGCCGC TERM 138 215059 - 215049 - H 72 -8.2 -4.09739 | overlap 215050 CTAACCCCCCCAAAA CCCG TCA CGGG CCAAGCGCCCGAAAG TTHB207 215119 - 215520 + | hypothetical protein TERM 139 215674 - 215650 - g 70 -12.8 -3.40403 | CCTGGCCGACGAGAA GGAGCGCTCC CTGGT GGAGCGCGCC CTCCTCGCCATCGCC TERM 140 216172 - 216194 + G 77 -11.2 -4.07568 | overlap 216191 GGGGTTTCAGGAGGA GGCCTTGCGC CTC GCCCAGGGCC TTTTCCGGGCGGAGG TTHB208 215591 - 216475 + | ribonucleoside-diphosphate reductase, beta subunit TERM 141 217265 - 217289 + G 73 -14.3 -3.29947 | opp_overlap 217264 CTGCACGGAGATCAT GCTCCCCTCCT CGG AGGAGGAGAGC TTCGTCTGCTGCCTC TTHB209 216486 - 218165 + | ribonucleotide-diphosphate reductase subunit alpha TERM 142 218215 - 218169 - T 72 -12.9 -3.15544 | gap 1, overlap 218171 TGCGAGGGGTAGGAA GACCTTCTCCCGCCTCCTCCTC GGGG GTGGAGGAGGCGGG-GCGGTTC ACCAGAGGATCCCCC TERM 143 218212 - 218171 - T 72 -13 -3.14051 | gap 2, overlap 218169 CGAGGGGTAGGAAGA CCTTCTCCCGCCTCCTCCTC GGGG GTGGAGGAGGCGGG-GC-GG TTCACCAGAGGATCC TERM 144 218278 - 218248 - T 95 -19.1 -3.54424 | opp_overlap 218241 218241 CCCCATCCGGCGAAA GACCTCACCCCGG GTGCG CCAGGGTGAGGTC CGGGCCCTTTCCCGG TTHB210 218645 - 218295 - | hypothetical protein TERM 145 219071 - 219094 + G 86 -9.4 -4.4648 | opp_overlap 219056 219057, overlap 219072 GGCCAAGGAGTTTGA CCCCAGGCGC GGGA GCGCCCGGGC TTTTCTCCTCACCCT TERM 146 219379 - 219393 + G 72 -12.8 -3.55444 | opp_overlap 219377 219376 GAACCCTCAAAACCT GGGCCC GAA GGGCCC TTTCCAAGCTCAAGG TTHB211 218847 - 219428 + | putative RNA polymerase sigma factor TTHB212 219418 - 220035 + | hypothetical protein TERM 147 220098 - 220075 - f 100 -19.6 -3.05384 | opp_overlap 220065 220062, overlap 220053 220052 220089 TCGGGCCGTAGGGAA GGGCGAGGGG GAAA CCCCTCGCCC TTCAAGGAGGTGGTT TTHB213 220114 - 220734 + | hypothetical protein TERM 148 220785 - 220736 - f 73 -9.1 -3.91084 | gap 1, opp_overlap 220766 TCATCCGGAAGTAAA CCTGCCTAGGG-GAGGCCCCGGGG CTC CCCCGGGGCCTTGCCACATCCATG GAGGGCCTCTTCTAC TTHB214 220783 - 220968 + | hypothetical protein TTHB215 222462 - 221278 - | hypothetical protein TERM 149 222506 - 222479 - R 100 -25.6 -3.31144 | overlap 222495 GTCTCAGGGGGAGAA GCGCCCGGGGCC TAAA GGCCCCGGGCGC CGGTTAGCGGAGGAG TTHB216 223054 - 222605 - | ABC transporter, periplasmic solute-binding protein-related protein TTHB217 223380 - 223066 - | hypothetical protein TTHB218 224146 - 223370 - | ABC transporter, ATP-binding protein TERM 150 223492 - 223520 + g 72 -16 -2.70932 | opp_overlap 223487 223486 GGTGCAGAACGGCCT GGGGAGGGCCAT AGGCC ACGGCCCTCCCC TCCTTCAGGAGAAGC TTHB219 225164 - 224139 - | hemin ABC transporter, permease protein TERM 151 224208 - 224191 - G 84 -10.5 -4.29508 | AGGTAGAGGAAGAAA GGCCCCC CCAG GAGGGCC GTGACCACCCCCACG TERM 152 225275 - 225245 - R 74 -5.3 -4.56597 | GGCCGCTTTGAAAAA GGCCCGGAGGAAC AGGTA GTTCTTCACGGCC CCACCTCCACGAAGC TTHB220 226173 - 225268 - | hemin ABC transporter, periplasmic hemin-binding protein TTHB221 226790 - 226170 - | hypothetical protein TERM 153 226655 - 226620 - G 81 -15.6 -3.53012 | gap 1, opp_overlap 226622 GCCGGCCTCCCCAAA GAGACCAAGGGTCTTTG GGG CAAAG-CCCTCGGCCTC CACAGCGCCTACGTA TTHB222 227103 - 226783 - | hypothetical protein TERM 154 226881 - 226901 + g 82 -12.5 -4.03234 | overlap 226864 TGCCGCTCCGGGCGT GCCCCTCCT TGA AGGCGGGGC TTTCTGTCCAGGCCC TERM 155 227834 - 227811 - R 76 -6 -4.55826 | opp_overlap 227810 227813, overlap 227813 CCCAAAAGACCAAAA GGGCGATAAG GATG CTTATCACTC AGTTTCAATCCTCTA TERM 156 228450 - 228430 - R 86 -8.2 -4.8048 | opp_overlap 228430 TCTGTACAGCAAAAA CCCCCGGT TTGGC ACAGGGGG TTTGCATAAGGTGGC TTHB223 228761 - 228477 - | hypothetical protein TTHB224 229756 - 228758 - | hypothetical protein TERM 157 229613 - 229633 + gr 72 -3.1 -4.56597 | GCCCAGGATCACGAT CTCCTCCAC CGC GATGAGGGG TTTTTGCAGGAGCAC TTHB225 230310 - 229726 - | hypothetical protein TERM 158 229901 - 229922 + gH 70 -2.1 -4.4891 | opp_overlap 229902, overlap 229902 AGCTCTGGGGTGAAA ACCACTTCC CGGC GGGTGTGGC TTTTGTGGTAGTAAA TERM 159 230858 - 230840 - g 76 -8 -4.43501 | overlap 230831 230827 AACCCACGGAGAAAA CCCGGAGG TCC CCCCTGGG TGGATGCGCCTCGAG TERM 160 231044 - 231072 + G 70 -2.9 -4.56597 | overlap 231045 CCCCGTGGTCTACAC CCCCCTGGCGG ACGAGTA CCCCCCGGGGC TTTTTGAGCGGGCGG TTHB226 230466 - 231659 + | hypothetical protein TERM 161 232471 - 232455 - g 77 -5 -4.70583 | overlap 232457 GGGAGGAAGAGAAAA GGGCCG AAAAG CGGCGC AAGCTGGAAGAGCGG TERM 162 232613 - 232586 - g 74 -4 -4.57073 | overlap 232587 GAGGGTCTGGAAAAA GCCAAAGACGAC CCCG GACGGCTTTGGA CGTGGCTGGACCCGG TERM 163 232650 - 232632 - g 75 -13.8 -3.57144 | GGCTGGACCCGGAAA GCCCCGAG GCT CCCGGGGC GATCCAGAGGCTTAA TERM 164 233195 - 233242 + G 85 -15 -3.81339 | gap 1, opp_overlap 233224, overlap 233236 GGCCGCGTGGTCTAC GCCCTCCAGG-CCTTGGGG CAAGAGGTAAA CCCCAAGGTCCTGGAGCGC TTTCCCTTCTACCTG TTHB227 231677 - 233977 + | hypothetical protein TTHB228 233979 - 234860 + | hypothetical protein TERM 165 235228 - 235242 + GF 75 -5.7 -4.57341 | overlap 235227 CATACTTGGGAGTAC CTCCT GGCCG AGGAG TTTTTGGGGGCGGTT TTHB229 234739 - 235653 + | hypothetical protein TERM 166 236336 - 236301 - gf 83 -5.2 -4.8048 | gap 1 TTCCGAGAGGAAAAA CGCCGGGTGCGCCTCAG GCC CTG-GGCGGCCGGGGCG AGGAAAGCGGACGAC TTHB230 235620 - 238073 + | putative ATP-dependent RNA helicase TERM 167 238297 - 238307 + G 70 -2.4 -4.60924 | CCGCCTTACCACCCT GGAC GAT GGCC TTTTTGCGCCCTTTC TTHB231 238073 - 238867 + | hypothetical protein TERM 168 238894 - 238914 + T 86 -8.2 -4.8048 | opp_overlap 238894 GCCACCTTATGCAAA CCCCCTGT GCCAA ACCGGGGG TTTTTGCTGTACAGA TTHB232 240526 - 239306 - | transposase TTHB233 241262 - 240849 - | hypothetical protein TTHB234 241489 - 241259 - | hypothetical protein TTHB235 242578 - 241796 - | hypothetical protein TTHB236 243210 - 244172 + | hypothetical protein TERM 169 244210 - 244196 - T 70 -4.2 -4.56597 | TCGCGTTCCCAAAAA CCCG TCGCTCC CGGG GATTACCCCCCTCCC TERM 170 244224 - 244259 + T 93 -19 -3.28712 | overlap 244224 GGGATTACCCCCCTC CCCCAGGCTTGGGGTC TTTG GGTCCCAAGCCGGGGG TTGTCCGGGCAAGAG TTHB237 245305 - 244424 - | 2-hydroxymuconic semialdehyde hydrolase TTHB238 245456 - 245274 - | hypothetical protein TTHB239 246251 - 245475 - | 2-oxopent-4-dienoate hydratase TTHB240 247767 - 246259 - | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase TTHB241 248473 - 247778 - | 4-oxalocrotonate decarboxylase TTHB242 248664 - 248470 - | 4-oxalocrotonate tautomerase TTHB243 249110 - 248664 - | hypothetical protein TTHB244 249873 - 249400 - | phenol hydroxylase component B TTHB245 250724 - 249870 - | hypothetical protein TTHB246 251777 - 250734 - | 4-hydroxy-2-ketovalerate aldolase TERM 171 251658 - 251679 + g 71 -15.1 -3.03771 | CCCCGCCTCGTCCAG GGCCTGGGC GATG GCCCGGGCC TCTTCCACCGTGTAC TTHB247 252697 - 251774 - | acetaldehyde dehydrogenase TTHB248 253532 - 252681 - | IclR family transcriptional regulator TTHB249 253726 - 255291 + | phenol hydroxylase component A TERM 172 255306 - 255335 + F 86 -17.9 -3.16564 | gap 1, overlap 255310 AGGTTCCTCCACGGC CGCGCC-GGGGTCC TGA GGACCCCCGGCGTG TTCCTCGCATCCCGC TTHB250 255502 - 256476 + | metapyrocatechase (catechol 2,3-dioxygenase) TERM 173 256492 - 256518 + F 77 -16.6 -2.70932 | CGGGGAAGTTTGCGC GGGGGCCTGG AACTTCC CCAGGCCCCC TAATTGCAAGGAGGA TTHB251 256540 - 256824 + | ABC transporter, periplasmic solute-binding protein-related protein SEQUENCE gi|55978435|ref|NC_006463.1| Thermus thermophilus HB8 plasmid pTT8, complete sequence (length 9322) TTHC001 119 - 1282 + | putative RepA protein TERM 1 1371 - 1343 - T 71 -13.9 -2.90212 | gap 1 CTATCAGGGTATACA GGCGGGGG-TGC GGGGGT GCAACCCCCGCC AGCCCCGAAGGGGCT TERM 2 1371 - 1387 + T 72 -13.7 -3.02144 | overlap 1373 GGGTGCAACCCCCGC CAGCCCC GAA GGGGCTG TATTGGAGAACCTAG TERM 3 1459 - 1469 + T 81 -4 -5.08601 | TTTTCCTGGAAGCCG CAAA AAT TTTG TTTTTCTTGGGGTAG TERM 4 1613 - 1664 + T 80 -17.2 -2.57881 | opp_overlap 1603 1639, overlap 1613 1645 TAAAACGGCTTTTAA GGCGGGGGGTGGGCGGGGGG CACCAATCCCAC CCCTCCCCCCGCCCCCCGGC CTTCTAGGGGCCTTA TERM 5 1613 - 1665 + T 86 -17 -3.30159 | gap 1, opp_overlap 1603 1639, overlap 1613 1645 TAAAACGGCTTTTAA GGC-GGGGGGTGGGCGGGGGG CACCAATCCCAC CCCTCCCCCCGCCCCCCGGCC TTCTAGGGGCCTTAG TTHC002 2148 - 1876 - | hypothetical protein TTHC003 2188 - 2694 + | hypothetical protein TERM 6 3367 - 3391 + G 71 -7 -4.28361 | opp_overlap 3366 3365 CCACGGTGGACAACG GGAAGGAGGG TCTTT CCCCCCGTCC TTTTGGTCCCATTGA TTHC004 2715 - 3464 + | hypothetical protein TERM 7 3916 - 3882 - gT 70 -10.7 -3.56325 | CGTCGACAATCAGAA GACCCCCGTCCTC GTGGTGGTG GAGGACGGCGGCC AGCCCGGGTACCTGC TTHC006 4226 - 3876 - | hypothetical protein TTHC005 3478 - 3954 + | hypothetical protein TERM 8 4667 - 4631 - fH 85 -14.3 -4.11216 | opp_overlap 4636 4637, overlap 4635 4637 4638 CCCCTAGGGGCAAAA CGAAGATCCCCCGGGGG TAA CCCCCGGGGGCCTTTTG CCATGACCGTTCTCC TERM 9 4662 - 4635 - fH 91 -17 -3.67622 | gap 1, opp_overlap 4636 4637, overlap 4631 4637 4638 TAGGGGCAAAACGAA GATCCCCCGGGGG TAA CCCCCGGGGG-CC TTTTGCCATGACCGT TERM 10 4636 - 4662 + FH 89 -15 -4.13945 | opp_overlap 4635 4631 4637 4638, overlap 4637 AGGGGCAAAACGAAG ATCCCCCGGGGG TAA CCCCCGGGGGCC TTTTGCCATGACCGT TERM 11 4661 - 4637 - fH 93 -18.5 -3.41359 | opp_overlap 4636 4637, overlap 4635 4631 4638 GGGGCAAAACGAAGA TCCCCCGGGGG TAA CCCCCGGGGGC CTTTTGCCATGACCG TERM 12 4637 - 4661 + FH 90 -18.5 -3.08046 | opp_overlap 4637 4635 4631 4638, overlap 4636 GGGGCAAAACGAAGA TCCCCCGGGGG TAA CCCCCGGGGGC CTTTTGCCATGACCG TERM 13 4660 - 4638 - fH 100 -22 -2.64333 | opp_overlap 4637 4636, overlap 4637 4635 4631 GGGCAAAACGAAGAT CCCCCGGGGG TAA CCCCCGGGGG CCTTTTGCCATGACC TERM 14 5809 - 5824 + FH 74 -10.4 -3.76125 | opp_overlap 5808 CGTCCTCCTACAGAT CCCCGA TCCC TCGGGG TTTGGATTGCGATAG TERM 15 6115 - 6088 - fH 73 -4.1 -4.59853 | gap 1, opp_overlap 6088 CTAACCGCCTAAAAA CCGCCCGAA-AC TGCGT GCATTCGTGCGG CCTTTTTAATTTTCA TTHC007 6164 - 6943 + | hypothetical protein TTHC008 6940 - 7323 + | hypothetical protein TTHC009 7333 - 7662 + | hypothetical protein TTHC010 7656 - 7928 + | hypothetical protein TTHC011 8137 - 7925 - | hypothetical protein TTHC012 8223 - 8435 + | anti-toxin-like protein TTHC013 8419 - 8688 + | toxin-like protein TERM 16 9184 - 9133 - g 70 -12.9 -3.40403 | gap 2, opp_overlap 9179, overlap 9114 9134 CCTGCGGGAGGAGAA CGCCCGCCTCCG-GGAGGC-CCTGA AGGC CCTGGAGCCCCCGCGGAGGCGGCCC TGGTGGCGGTTCTGG TERM 17 9183 - 9134 - g 71 -16.4 -2.64099 | gap 2, opp_overlap 9179, overlap 9114 9133 CTGCGGGAGGAGAAC GCCCGCCTCCG-GGAGGC-CCTGA AGGC CCTGGAGCCCCCGCGGAGGCGGCC CTGGTGGCGGTTCTG TTHC014 8771 - 9208 + | hypothetical protein